chr1 IsoQuant gene 14404 29570 . - . gene_id ENSG00000227232.5; transcripts 1; gene_type unprocessed_pseudogene; gene_name WASH7P; havana_gene OTTHUMG00000000958.1; NA chr1 IsoQuant transcript 14407 29350 . - . gene_id ENSG00000227232.5; transcript_id transcript14.chr1.nnic; exons 7; 3.622181 chr1 IsoQuant gene 184876 199879 . - . gene_id ENSG00000279457.4; transcripts 3; gene_type unprocessed_pseudogene; gene_name FO538757.1; havana_gene OTTHUMG00000191963.1; NA chr1 IsoQuant transcript 184876 199879 . - . gene_id ENSG00000279457.4; transcript_id transcript2.chr1.nnic; exons 12; 1.81109 chr1 IsoQuant transcript 184876 199879 . - . gene_id ENSG00000279457.4; transcript_id transcript6.chr1.nnic; exons 10; 9.055452 chr1 IsoQuant transcript 184876 199879 . - . gene_id ENSG00000279457.4; transcript_id transcript10.chr1.nnic; exons 9; 1.81109 chr1 IsoQuant gene 817371 819837 . + . gene_id ENSG00000177757.2; transcripts 1; gene_type lincRNA; gene_name FAM87B; havana_gene OTTHUMG00000002471.2; NA chr1 IsoQuant transcript 817371 819837 . + . gene_id ENSG00000177757.2; transcript_id ENST00000326734.2; exons 2; 1.81109 chr1 IsoQuant gene 825138 859446 . + . gene_id ENSG00000228794.8; transcripts 3; gene_type processed_transcript; gene_name LINC01128; havana_gene OTTHUMG00000002468.7; NA chr1 IsoQuant transcript 827581 857245 . + . gene_id ENSG00000228794.8; transcript_id transcript28.chr1.nnic; exons 7; 5.279329 chr1 IsoQuant transcript 827774 857245 . + . gene_id ENSG00000228794.8; transcript_id transcript31.chr1.nnic; exons 7; 2.562693 chr1 IsoQuant transcript 827639 857245 . + . gene_id ENSG00000228794.8; transcript_id transcript32.chr1.nnic; exons 6; 7.543192 chr1 IsoQuant gene 923923 944581 . + . gene_id ENSG00000187634.11; transcripts 3; gene_type protein_coding; gene_name SAMD11; havana_gene OTTHUMG00000040719.10; NA chr1 IsoQuant transcript 923923 944575 . + . gene_id ENSG00000187634.11; transcript_id transcript59.chr1.nic; exons 14; 6.338817 chr1 IsoQuant transcript 924076 944575 . + . gene_id ENSG00000187634.11; transcript_id transcript65.chr1.nic; exons 13; 1.81109 chr1 IsoQuant transcript 942113 944575 . + . gene_id ENSG00000187634.11; transcript_id transcript72.chr1.nic; exons 5; 3.622181 chr1 IsoQuant gene 944203 959309 . - . gene_id ENSG00000188976.10; transcripts 4; gene_type protein_coding; gene_name NOC2L; havana_gene OTTHUMG00000040720.1; NA chr1 IsoQuant transcript 944203 959297 . - . gene_id ENSG00000188976.10; transcript_id transcript38.chr1.nnic; exons 20; 15.656877 chr1 IsoQuant transcript 944203 959297 . - . gene_id ENSG00000188976.10; transcript_id transcript41.chr1.nic; exons 19; 4.790334 chr1 IsoQuant transcript 944204 959297 . - . gene_id ENSG00000188976.10; transcript_id transcript45.chr1.nic; exons 19; 60.327424 chr1 IsoQuant transcript 944204 959290 . - . gene_id ENSG00000188976.10; transcript_id ENST00000327044.6; exons 19; 180.466111 chr1 IsoQuant gene 960587 965715 . + . gene_id ENSG00000187961.13; transcripts 1; gene_type protein_coding; gene_name KLHL17; havana_gene OTTHUMG00000040721.6; NA chr1 IsoQuant transcript 960587 965715 . + . gene_id ENSG00000187961.13; transcript_id ENST00000338591.7; exons 12; 5.433271 chr1 IsoQuant gene 966482 975867 . + . gene_id ENSG00000187583.10; transcripts 1; gene_type protein_coding; gene_name PLEKHN1; havana_gene OTTHUMG00000040756.4; NA chr1 IsoQuant transcript 966482 975867 . + . gene_id ENSG00000187583.10; transcript_id transcript74.chr1.nic; exons 16; 2.716636 chr1 IsoQuant gene 998962 1000172 . - . gene_id ENSG00000188290.10; transcripts 2; gene_type protein_coding; gene_name HES4; havana_gene OTTHUMG00000040758.2; NA chr1 IsoQuant transcript 998966 1000096 . - . gene_id ENSG00000188290.10; transcript_id ENST00000481869.1; exons 2; 7.244362 chr1 IsoQuant transcript 998964 1000111 . - . gene_id ENSG00000188290.10; transcript_id ENST00000304952.10; exons 4; 7.244362 chr1 IsoQuant gene 1001138 1014541 . + . gene_id ENSG00000187608.8; transcripts 1; gene_type protein_coding; gene_name ISG15; havana_gene OTTHUMG00000040777.3; NA chr1 IsoQuant transcript 1013423 1014540 . + . gene_id ENSG00000187608.8; transcript_id ENST00000379389.4; exons 2; 15.394269 chr1 IsoQuant gene 1020123 1056118 . + . gene_id ENSG00000188157.14; transcripts 1; gene_type protein_coding; gene_name AGRN; tag overlapping_locus; havana_gene OTTHUMG00000040778.5; NA chr1 IsoQuant transcript 1020123 1056116 . + . gene_id ENSG00000188157.14; transcript_id ENST00000379370.6; exons 36; 6.338817 chr1 IsoQuant gene 1081818 1116361 . - . gene_id ENSG00000131591.17; transcripts 2; gene_type protein_coding; gene_name C1orf159; havana_gene OTTHUMG00000000745.9; NA chr1 IsoQuant transcript 1081823 1116098 . - . gene_id ENSG00000131591.17; transcript_id ENST00000421241.6; exons 10; 7.697135 chr1 IsoQuant transcript 1081823 1116095 . - . gene_id ENSG00000131591.17; transcript_id ENST00000379325.7; exons 11; 3.169408 chr1 IsoQuant gene 1216908 1232061 . - . gene_id ENSG00000078808.16; transcripts 4; gene_type protein_coding; gene_name SDF4; havana_gene OTTHUMG00000001812.6; NA chr1 IsoQuant transcript 1216908 1232061 . - . gene_id ENSG00000078808.16; transcript_id transcript113.chr1.nnic; exons 7; 14.262338 chr1 IsoQuant transcript 1216908 1232001 . - . gene_id ENSG00000078808.16; transcript_id ENST00000360001.10; exons 7; 295.886907 chr1 IsoQuant transcript 1216931 1232031 . - . gene_id ENSG00000078808.16; transcript_id ENST00000263741.11; exons 7; 17.20536 chr1 IsoQuant transcript 1216932 1221351 . - . gene_id ENSG00000078808.16; transcript_id ENST00000494748.1; exons 3; 3.395795 chr1 IsoQuant gene 1253908 1273885 . - . gene_id ENSG00000160087.20; transcripts 1; gene_type protein_coding; gene_name UBE2J2; havana_gene OTTHUMG00000001911.9; NA chr1 IsoQuant transcript 1253908 1273833 . - . gene_id ENSG00000160087.20; transcript_id transcript131.chr1.nic; exons 7; 6.338817 chr1 IsoQuant gene 1292360 1309609 . - . gene_id ENSG00000131584.18; transcripts 2; gene_type protein_coding; gene_name ACAP3; tag ncRNA_host; havana_gene OTTHUMG00000002235.4; NA chr1 IsoQuant transcript 1292360 1308015 . - . gene_id ENSG00000131584.18; transcript_id transcript165.chr1.nic; exons 22; 19.704664 chr1 IsoQuant transcript 1292376 1308018 . - . gene_id ENSG00000131584.18; transcript_id ENST00000354700.9; exons 24; 80.376195 chr1 IsoQuant gene 1308022 1311677 . + . gene_id ENSG00000169972.11; transcripts 2; gene_type protein_coding; gene_name PUSL1; havana_gene OTTHUMG00000003361.3; NA chr1 IsoQuant transcript 1308567 1311677 . + . gene_id ENSG00000169972.11; transcript_id ENST00000379031.9; exons 8; 18.110905 chr1 IsoQuant transcript 1308022 1311676 . + . gene_id ENSG00000169972.11; transcript_id transcript196.chr1.nic; exons 7; 3.622181 chr1 IsoQuant gene 1311585 1324695 . - . gene_id ENSG00000127054.20; transcripts 3; gene_type protein_coding; gene_name INTS11; tag ncRNA_host; havana_gene OTTHUMG00000003330.13; NA chr1 IsoQuant transcript 1311598 1324695 . - . gene_id ENSG00000127054.20; transcript_id transcript177.chr1.nic; exons 17; 9.055452 chr1 IsoQuant transcript 1311597 1324691 . - . gene_id ENSG00000127054.20; transcript_id ENST00000435064.5; exons 17; 99.609976 chr1 IsoQuant gene 1324756 1328897 . + . gene_id ENSG00000224051.6; transcripts 1; gene_type protein_coding; gene_name CPTP; havana_gene OTTHUMG00000003171.3; NA chr1 IsoQuant transcript 1324767 1328897 . + . gene_id ENSG00000224051.6; transcript_id ENST00000343938.8; exons 3; 78.782436 chr1 IsoQuant gene 1331314 1335306 . + . gene_id ENSG00000169962.4; transcripts 1; gene_type protein_coding; gene_name TAS1R3; havana_gene OTTHUMG00000003071.1; NA chr1 IsoQuant transcript 1331314 1335306 . + . gene_id ENSG00000169962.4; transcript_id ENST00000339381.5; exons 6; 1.81109 chr1 IsoQuant gene 1335275 1349460 . - . gene_id ENSG00000107404.19; transcripts 4; gene_type protein_coding; gene_name DVL1; tag ncRNA_host; havana_gene OTTHUMG00000003069.4; NA chr1 IsoQuant transcript 1335275 1349425 . - . gene_id ENSG00000107404.19; transcript_id transcript210.chr1.nnic; exons 16; 7.715245 chr1 IsoQuant transcript 1335276 1349350 . - . gene_id ENSG00000107404.19; transcript_id ENST00000378888.9; exons 15; 12.242972 chr1 IsoQuant transcript 1335275 1349460 . - . gene_id ENSG00000107404.19; transcript_id transcript226.chr1.nic; exons 14; 7.715245 chr1 IsoQuant transcript 1335276 1349112 . - . gene_id ENSG00000107404.19; transcript_id ENST00000378891.9; exons 15; 25.82615 chr1 IsoQuant gene 1352610 1357960 . + . gene_id novel_gene_chr1_247; transcripts 1; NA chr1 IsoQuant transcript 1352610 1357960 . + . gene_id novel_gene_chr1_247; transcript_id transcript246.chr1.nnic; exons 3; 3.622181 chr1 IsoQuant gene 1352685 1361777 . - . gene_id ENSG00000162576.16; transcripts 4; gene_type protein_coding; gene_name MXRA8; havana_gene OTTHUMG00000002973.5; NA chr1 IsoQuant transcript 1352689 1358794 . - . gene_id ENSG00000162576.16; transcript_id ENST00000342753.8; exons 9; 3.232797 chr1 IsoQuant transcript 1352685 1358557 . - . gene_id ENSG00000162576.16; transcript_id transcript238.chr1.nic; exons 9; 5.949432 chr1 IsoQuant transcript 1352691 1358535 . - . gene_id ENSG00000162576.16; transcript_id ENST00000309212.10; exons 10; 87.448504 chr1 IsoQuant transcript 1352692 1358543 . - . gene_id ENSG00000162576.16; transcript_id ENST00000445648.5; exons 10; 2.327251 chr1 IsoQuant gene 1373730 1375495 . - . gene_id ENSG00000175756.13; transcripts 4; gene_type protein_coding; gene_name AURKAIP1; havana_gene OTTHUMG00000001413.3; NA chr1 IsoQuant transcript 1373730 1375495 . - . gene_id ENSG00000175756.13; transcript_id ENST00000338338.9; exons 4; 130.398514 chr1 IsoQuant transcript 1373737 1375173 . - . gene_id ENSG00000175756.13; transcript_id ENST00000378853.3; exons 4; 45.277262 chr1 IsoQuant transcript 1373732 1375169 . - . gene_id ENSG00000175756.13; transcript_id ENST00000321751.9; exons 4; 11.772088 chr1 IsoQuant transcript 1373730 1375157 . - . gene_id ENSG00000175756.13; transcript_id ENST00000338370.7; exons 3; 2.716636 chr1 IsoQuant gene 1385710 1399378 . - . gene_id ENSG00000221978.11; transcripts 7; gene_type protein_coding; gene_name CCNL2; havana_gene OTTHUMG00000002917.6; NA chr1 IsoQuant transcript 1385710 1399378 . - . gene_id ENSG00000221978.11; transcript_id transcript263.chr1.nic; exons 13; 19.251892 chr1 IsoQuant transcript 1386503 1399378 . - . gene_id ENSG00000221978.11; transcript_id transcript276.chr1.nic; exons 12; 9.562558 chr1 IsoQuant transcript 1386496 1399378 . - . gene_id ENSG00000221978.11; transcript_id transcript282.chr1.nic; exons 12; 39.029 chr1 IsoQuant transcript 1385710 1399378 . - . gene_id ENSG00000221978.11; transcript_id transcript291.chr1.nic; exons 11; 177.613643 chr1 IsoQuant transcript 1386495 1399312 . - . gene_id ENSG00000221978.11; transcript_id ENST00000400809.7; exons 11; 9.245617 chr1 IsoQuant transcript 1386708 1399311 . - . gene_id ENSG00000221978.11; transcript_id ENST00000481223.6; exons 12; 7.153807 chr1 IsoQuant transcript 1392288 1399317 . - . gene_id ENSG00000221978.11; transcript_id ENST00000408918.8; exons 6; 17.295914 chr1 IsoQuant gene 1399522 1402046 . + . gene_id ENSG00000224870.6; transcripts 2; gene_type processed_transcript; gene_name AL391244.1; havana_gene OTTHUMG00000002908.4; NA chr1 IsoQuant transcript 1399530 1402026 . + . gene_id ENSG00000224870.6; transcript_id ENST00000418833.2; exons 2; 13.583179 chr1 IsoQuant transcript 1399527 1402046 . + . gene_id ENSG00000224870.6; transcript_id ENST00000444362.2; exons 3; 32.599629 chr1 IsoQuant gene 1401908 1407313 . - . gene_id ENSG00000242485.5; transcripts 2; gene_type protein_coding; gene_name MRPL20; tag ncRNA_host; havana_gene OTTHUMG00000002916.3; NA chr1 IsoQuant transcript 1401908 1407313 . - . gene_id ENSG00000242485.5; transcript_id ENST00000344843.11; exons 4; 90.101751 chr1 IsoQuant transcript 1401913 1407268 . - . gene_id ENSG00000242485.5; transcript_id ENST00000487659.1; exons 3; 2.263863 chr1 IsoQuant gene 1418420 1421769 . - . gene_id ENSG00000235098.8; transcripts 1; gene_type protein_coding; gene_name ANKRD65; havana_gene OTTHUMG00000002911.4; NA chr1 IsoQuant transcript 1418422 1421444 . - . gene_id ENSG00000235098.8; transcript_id ENST00000537107.5; exons 4; 5.433271 chr1 IsoQuant gene 1434861 1442882 . + . gene_id ENSG00000179403.11; transcripts 1; gene_type protein_coding; gene_name VWA1; havana_gene OTTHUMG00000002975.5; NA chr1 IsoQuant transcript 1435671 1442882 . + . gene_id ENSG00000179403.11; transcript_id ENST00000476993.1; exons 3; 162.092598 chr1 IsoQuant gene 1471759 1497848 . + . gene_id ENSG00000160072.19; transcripts 6; gene_type protein_coding; gene_name ATAD3B; havana_gene OTTHUMG00000000577.5; NA chr1 IsoQuant transcript 1471759 1496205 . + . gene_id ENSG00000160072.19; transcript_id transcript321.chr1.nnic; exons 17; 2.490249 chr1 IsoQuant transcript 1471759 1496205 . + . gene_id ENSG00000160072.19; transcript_id transcript325.chr1.nnic; exons 16; 2.191419 chr1 IsoQuant transcript 1471759 1496205 . + . gene_id ENSG00000160072.19; transcript_id transcript326.chr1.nnic; exons 16; 14.262338 chr1 IsoQuant transcript 1471759 1496205 . + . gene_id ENSG00000160072.19; transcript_id transcript328.chr1.nnic; exons 15; 3.776124 chr1 IsoQuant transcript 1471759 1496205 . + . gene_id ENSG00000160072.19; transcript_id transcript331.chr1.nnic; exons 14; 2.870578 chr1 IsoQuant transcript 1471769 1496202 . + . gene_id ENSG00000160072.19; transcript_id ENST00000308647.7; exons 16; 5.206885 chr1 IsoQuant gene 1512118 1534687 . + . gene_id ENSG00000197785.13; transcripts 4; gene_type protein_coding; gene_name ATAD3A; havana_gene OTTHUMG00000000575.6; NA chr1 IsoQuant transcript 1512148 1534687 . + . gene_id ENSG00000197785.13; transcript_id transcript340.chr1.nnic; exons 17; 4.410005 chr1 IsoQuant transcript 1512118 1534687 . + . gene_id ENSG00000197785.13; transcript_id transcript345.chr1.nic; exons 15; 4.527726 chr1 IsoQuant transcript 1512151 1534685 . + . gene_id ENSG00000197785.13; transcript_id ENST00000378756.7; exons 16; 85.909077 chr1 IsoQuant transcript 1512175 1534685 . + . gene_id ENSG00000197785.13; transcript_id ENST00000378755.9; exons 16; 1.69337 chr1 IsoQuant gene 1541673 1574869 . - . gene_id ENSG00000160075.11; transcripts 1; gene_type protein_coding; gene_name SSU72; havana_gene OTTHUMG00000000576.5; NA chr1 IsoQuant transcript 1541673 1574869 . - . gene_id ENSG00000160075.11; transcript_id ENST00000291386.3; exons 5; 124.059698 chr1 IsoQuant gene 1597560 1602840 . + . gene_id novel_gene_chr1_354; transcripts 1; NA chr1 IsoQuant transcript 1597560 1602840 . + . gene_id novel_gene_chr1_354; transcript_id transcript353.chr1.nnic; exons 5; 9.055452 chr1 IsoQuant gene 1615415 1630610 . + . gene_id ENSG00000197530.12; transcripts 8; gene_type protein_coding; gene_name MIB2; havana_gene OTTHUMG00000074647.10; NA chr1 IsoQuant transcript 1615415 1630605 . + . gene_id ENSG00000197530.12; transcript_id ENST00000520777.5; exons 20; 2.544582 chr1 IsoQuant transcript 1615870 1630609 . + . gene_id ENSG00000197530.12; transcript_id transcript386.chr1.nnic; exons 20; 5.976599 chr1 IsoQuant transcript 1615843 1630609 . + . gene_id ENSG00000197530.12; transcript_id transcript390.chr1.nic; exons 20; 11.40987 chr1 IsoQuant transcript 1616224 1630609 . + . gene_id ENSG00000197530.12; transcript_id transcript413.chr1.nic; exons 19; 5.976599 chr1 IsoQuant transcript 1615421 1630610 . + . gene_id ENSG00000197530.12; transcript_id ENST00000355826.9; exons 20; 52.159406 chr1 IsoQuant transcript 1615443 1630605 . + . gene_id ENSG00000197530.12; transcript_id ENST00000505820.6; exons 20; 12.315415 chr1 IsoQuant transcript 1615496 1630604 . + . gene_id ENSG00000197530.12; transcript_id ENST00000489635.5; exons 20; 5.849822 chr1 IsoQuant transcript 1616310 1630604 . + . gene_id ENSG00000197530.12; transcript_id ENST00000504599.5; exons 19; 2.354418 chr1 IsoQuant gene 1632095 1635263 . + . gene_id ENSG00000189409.13; transcripts 1; gene_type protein_coding; gene_name MMP23B; havana_gene OTTHUMG00000074713.6; NA chr1 IsoQuant transcript 1632095 1634654 . + . gene_id ENSG00000189409.13; transcript_id ENST00000356026.9; exons 8; 7.244362 chr1 IsoQuant gene 1635227 1659012 . - . gene_id ENSG00000248333.8; transcripts 2; gene_type protein_coding; gene_name CDK11B; havana_gene OTTHUMG00000078638.6; NA chr1 IsoQuant transcript 1635227 1659012 . - . gene_id ENSG00000248333.8; transcript_id ENST00000341832.10; exons 20; 3.622181 chr1 IsoQuant gene 1659529 1692728 . - . gene_id ENSG00000189339.11; transcripts 1; gene_type protein_coding; gene_name SLC35E2B; havana_gene OTTHUMG00000078639.3; NA chr1 IsoQuant transcript 1661479 1692728 . - . gene_id ENSG00000189339.11; transcript_id ENST00000611123.1; exons 9; 69.726983 chr1 IsoQuant gene 1724838 1746096 . - . gene_id ENSG00000215790.6; transcripts 1; gene_type protein_coding; gene_name SLC35E2; tag overlapping_locus; havana_gene OTTHUMG00000000823.5; NA chr1 IsoQuant transcript 1727386 1746096 . - . gene_id ENSG00000215790.6; transcript_id transcript446.chr1.nnic; exons 7; 4.527726 chr1 IsoQuant gene 1751232 1780457 . - . gene_id ENSG00000008130.15; transcripts 3; gene_type protein_coding; gene_name NADK; havana_gene OTTHUMG00000000942.6; NA chr1 IsoQuant transcript 1751233 1780123 . - . gene_id ENSG00000008130.15; transcript_id transcript459.chr1.nic; exons 12; 16.363202 chr1 IsoQuant transcript 1751232 1778470 . - . gene_id ENSG00000008130.15; transcript_id ENST00000341426.9; exons 12; 344.170579 chr1 IsoQuant transcript 1751232 1778790 . - . gene_id ENSG00000008130.15; transcript_id ENST00000341991.7; exons 12; 5.49666 chr1 IsoQuant gene 1785285 1891117 . - . gene_id ENSG00000078369.17; transcripts 3; gene_type protein_coding; gene_name GNB1; havana_gene OTTHUMG00000000940.8; NA chr1 IsoQuant transcript 1785286 1891056 . - . gene_id ENSG00000078369.17; transcript_id ENST00000378609.8; exons 12; 347.484874 chr1 IsoQuant transcript 1785285 1891117 . - . gene_id ENSG00000078369.17; transcript_id ENST00000610897.4; exons 11; 83.97121 chr1 IsoQuant transcript 1785285 1891117 . - . gene_id ENSG00000078369.17; transcript_id ENST00000615252.4; exons 10; 11.165373 chr1 IsoQuant gene 1917588 1919331 . - . gene_id ENSG00000178821.12; transcripts 5; gene_type protein_coding; gene_name TMEM52; havana_gene OTTHUMG00000000944.7; NA chr1 IsoQuant transcript 1917588 1919279 . - . gene_id ENSG00000178821.12; transcript_id transcript509.chr1.nic; exons 4; 7.244362 chr1 IsoQuant transcript 1917588 1919331 . - . gene_id ENSG00000178821.12; transcript_id transcript511.chr1.nnic; exons 4; 2.716636 chr1 IsoQuant transcript 1917588 1919279 . - . gene_id ENSG00000178821.12; transcript_id transcript516.chr1.nic; exons 3; 6.338817 chr1 IsoQuant transcript 1917588 1919279 . - . gene_id ENSG00000178821.12; transcript_id transcript517.chr1.nic; exons 3; 2.716636 chr1 IsoQuant transcript 1917591 1919273 . - . gene_id ENSG00000178821.12; transcript_id ENST00000310991.7; exons 5; 23.544176 chr1 IsoQuant gene 1921951 2003837 . - . gene_id ENSG00000142609.17; transcripts 3; gene_type protein_coding; gene_name CFAP74; havana_gene OTTHUMG00000000945.16; NA chr1 IsoQuant transcript 1983675 1989178 . - . gene_id ENSG00000142609.17; transcript_id transcript522.chr1.nic; exons 5; 3.622181 chr1 IsoQuant transcript 1983675 1989178 . - . gene_id ENSG00000142609.17; transcript_id transcript523.chr1.nnic; exons 5; 3.622181 chr1 IsoQuant transcript 1983675 1989178 . - . gene_id ENSG00000142609.17; transcript_id transcript525.chr1.nic; exons 4; 7.244362 chr1 IsoQuant gene 2050470 2185395 . + . gene_id ENSG00000067606.16; transcripts 1; gene_type protein_coding; gene_name PRKCZ; havana_gene OTTHUMG00000001238.13; NA chr1 IsoQuant transcript 2050470 2185395 . + . gene_id ENSG00000067606.16; transcript_id ENST00000378567.7; exons 18; 47.088352 chr1 IsoQuant gene 2184461 2212720 . - . gene_id ENSG00000162585.16; transcripts 5; gene_type protein_coding; gene_name FAAP20; havana_gene OTTHUMG00000001404.7; NA chr1 IsoQuant transcript 2189553 2194772 . - . gene_id ENSG00000162585.16; transcript_id transcript542.chr1.nic; exons 5; 9.055452 chr1 IsoQuant transcript 2184478 2194775 . - . gene_id ENSG00000162585.16; transcript_id ENST00000414253.5; exons 7; 1.81109 chr1 IsoQuant transcript 2189548 2194774 . - . gene_id ENSG00000162585.16; transcript_id ENST00000378546.8; exons 4; 47.541125 chr1 IsoQuant transcript 2189548 2194750 . - . gene_id ENSG00000162585.16; transcript_id ENST00000378543.2; exons 3; 2.263863 chr1 IsoQuant gene 2321253 2391707 . - . gene_id ENSG00000116151.13; transcripts 1; gene_type protein_coding; gene_name MORN1; tag overlapping_locus; havana_gene OTTHUMG00000001402.6; NA chr1 IsoQuant transcript 2385533 2391547 . - . gene_id ENSG00000116151.13; transcript_id transcript554.chr1.nic; exons 4; 1.81109 chr1 IsoQuant gene 2391773 2405444 . + . gene_id ENSG00000157916.19; transcripts 5; gene_type protein_coding; gene_name RER1; havana_gene OTTHUMG00000001403.5; NA chr1 IsoQuant transcript 2391773 2405442 . + . gene_id ENSG00000157916.19; transcript_id transcript558.chr1.nnic; exons 8; 21.461422 chr1 IsoQuant transcript 2391788 2405442 . + . gene_id ENSG00000157916.19; transcript_id transcript560.chr1.nnic; exons 8; 20.555877 chr1 IsoQuant transcript 2391784 2405442 . + . gene_id ENSG00000157916.19; transcript_id transcript568.chr1.nnic; exons 7; 18.744786 chr1 IsoQuant transcript 2391833 2405444 . + . gene_id ENSG00000157916.19; transcript_id ENST00000605895.5; exons 7; 346.552163 chr1 IsoQuant transcript 2391890 2403751 . + . gene_id ENSG00000157916.19; transcript_id ENST00000378512.5; exons 7; 12.677633 chr1 IsoQuant gene 2403964 2413797 . - . gene_id ENSG00000157911.9; transcripts 2; gene_type protein_coding; gene_name PEX10; havana_gene OTTHUMG00000001637.6; NA chr1 IsoQuant transcript 2403964 2412530 . - . gene_id ENSG00000157911.9; transcript_id ENST00000288774.7; exons 6; 11.880754 chr1 IsoQuant transcript 2404819 2412571 . - . gene_id ENSG00000157911.9; transcript_id ENST00000447513.6; exons 6; 100.515521 chr1 IsoQuant gene 2508533 2526630 . - . gene_id ENSG00000157881.13; transcripts 2; gene_type protein_coding; gene_name PANK4; havana_gene OTTHUMG00000000791.4; NA chr1 IsoQuant transcript 2508535 2526630 . - . gene_id ENSG00000157881.13; transcript_id transcript581.chr1.nic; exons 19; 7.697135 chr1 IsoQuant transcript 2508533 2526628 . - . gene_id ENSG00000157881.13; transcript_id ENST00000378466.7; exons 19; 46.63558 chr1 IsoQuant gene 2555639 2565382 . + . gene_id ENSG00000157873.17; transcripts 7; gene_type protein_coding; gene_name TNFRSF14; havana_gene OTTHUMG00000000792.18; NA chr1 IsoQuant transcript 2555754 2563863 . + . gene_id ENSG00000157873.17; transcript_id transcript590.chr1.nic; exons 9; 18.989284 chr1 IsoQuant transcript 2555790 2563863 . + . gene_id ENSG00000157873.17; transcript_id transcript593.chr1.nic; exons 9; 4.50056 chr1 IsoQuant transcript 2555760 2563863 . + . gene_id ENSG00000157873.17; transcript_id transcript596.chr1.nic; exons 8; 4.527726 chr1 IsoQuant transcript 2555760 2563863 . + . gene_id ENSG00000157873.17; transcript_id transcript597.chr1.nic; exons 8; 5.134442 chr1 IsoQuant transcript 2555760 2563863 . + . gene_id ENSG00000157873.17; transcript_id transcript600.chr1.nic; exons 8; 8.149907 chr1 IsoQuant transcript 2555760 2563863 . + . gene_id ENSG00000157873.17; transcript_id transcript607.chr1.nic; exons 7; 8.756622 chr1 IsoQuant transcript 2556366 2563829 . + . gene_id ENSG00000157873.17; transcript_id ENST00000355716.4; exons 8; 62.455455 chr1 IsoQuant gene 2586491 2591470 . + . gene_id ENSG00000157870.14; transcripts 5; gene_type protein_coding; gene_name FAM213B; havana_gene OTTHUMG00000000847.5; NA chr1 IsoQuant transcript 2587041 2591470 . + . gene_id ENSG00000157870.14; transcript_id transcript620.chr1.nic; exons 6; 4.346617 chr1 IsoQuant transcript 2586798 2591463 . + . gene_id ENSG00000157870.14; transcript_id ENST00000378427.5; exons 7; 20.646431 chr1 IsoQuant transcript 2586775 2591468 . + . gene_id ENSG00000157870.14; transcript_id ENST00000419916.6; exons 7; 54.151605 chr1 IsoQuant transcript 2586780 2591467 . + . gene_id ENSG00000157870.14; transcript_id ENST00000378424.8; exons 7; 1.629981 chr1 IsoQuant transcript 2587078 2591469 . + . gene_id ENSG00000157870.14; transcript_id ENST00000484099.5; exons 6; 1.629981 chr1 IsoQuant gene 2590639 2632990 . - . gene_id ENSG00000142606.15; transcripts 1; gene_type protein_coding; gene_name MMEL1; havana_gene OTTHUMG00000000846.4; NA chr1 IsoQuant transcript 2590642 2594166 . - . gene_id ENSG00000142606.15; transcript_id transcript622.chr1.nic; exons 6; 2.716636 chr1 IsoQuant gene 3487970 3625649 . - . gene_id ENSG00000162591.15; transcripts 3; gene_type protein_coding; gene_name MEGF6; tag ncRNA_host; havana_gene OTTHUMG00000000611.7; NA chr1 IsoQuant transcript 3487970 3625649 . - . gene_id ENSG00000162591.15; transcript_id transcript630.chr1.nnic; exons 35; 2.716636 chr1 IsoQuant transcript 3487970 3501652 . - . gene_id ENSG00000162591.15; transcript_id transcript634.chr1.nic; exons 18; 2.716636 chr1 IsoQuant gene 3625002 3630127 . + . gene_id ENSG00000158109.14; transcripts 1; gene_type protein_coding; gene_name TPRG1L; havana_gene OTTHUMG00000000609.1; NA chr1 IsoQuant transcript 3625002 3630127 . + . gene_id ENSG00000158109.14; transcript_id ENST00000378344.6; exons 5; 154.848236 chr1 IsoQuant gene 3630767 3652761 . - . gene_id ENSG00000116213.15; transcripts 4; gene_type protein_coding; gene_name WRAP73; havana_gene OTTHUMG00000000612.5; NA chr1 IsoQuant transcript 3630767 3650108 . - . gene_id ENSG00000116213.15; transcript_id transcript640.chr1.nnic; exons 12; 3.622181 chr1 IsoQuant transcript 3630767 3650108 . - . gene_id ENSG00000116213.15; transcript_id transcript643.chr1.nic; exons 11; 1.81109 chr1 IsoQuant transcript 3630767 3650073 . - . gene_id ENSG00000116213.15; transcript_id ENST00000270708.11; exons 12; 48.899443 chr1 IsoQuant transcript 3630767 3650058 . - . gene_id ENSG00000116213.15; transcript_id ENST00000378322.7; exons 11; 2.716636 chr1 IsoQuant gene 3735601 3747396 . - . gene_id ENSG00000227372.11; transcripts 8; gene_type transcribed_unitary_pseudogene; gene_name TP73-AS1; havana_gene OTTHUMG00000003414.5; NA chr1 IsoQuant transcript 3737150 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript652.chr1.nic; exons 6; 1.81109 chr1 IsoQuant transcript 3736119 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript656.chr1.nic; exons 6; 1.81109 chr1 IsoQuant transcript 3737150 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript658.chr1.nnic; exons 6; 2.263863 chr1 IsoQuant transcript 3735611 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript660.chr1.nic; exons 5; 8.149907 chr1 IsoQuant transcript 3735611 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript662.chr1.nic; exons 5; 9.055452 chr1 IsoQuant transcript 3737139 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript664.chr1.nic; exons 5; 19.921995 chr1 IsoQuant transcript 3737133 3747396 . - . gene_id ENSG00000227372.11; transcript_id transcript665.chr1.nic; exons 5; 7.244362 chr1 IsoQuant transcript 3737149 3747336 . - . gene_id ENSG00000227372.11; transcript_id ENST00000423764.5; exons 5; 16.752587 chr1 IsoQuant gene 3778558 3796504 . - . gene_id ENSG00000130764.9; transcripts 1; gene_type protein_coding; gene_name LRRC47; havana_gene OTTHUMG00000003506.3; NA chr1 IsoQuant transcript 3778558 3796504 . - . gene_id ENSG00000130764.9; transcript_id ENST00000378251.2; exons 7; 204.653224 chr1 IsoQuant gene 3812081 3857218 . - . gene_id ENSG00000116198.12; transcripts 1; gene_type protein_coding; gene_name CEP104; havana_gene OTTHUMG00000003507.5; NA chr1 IsoQuant transcript 3816149 3857218 . - . gene_id ENSG00000116198.12; transcript_id transcript680.chr1.nic; exons 21; 3.622181 chr1 IsoQuant gene 3857267 3885429 . + . gene_id ENSG00000169598.15; transcripts 1; gene_type protein_coding; gene_name DFFB; havana_gene OTTHUMG00000003525.6; NA chr1 IsoQuant transcript 3857281 3885429 . + . gene_id ENSG00000169598.15; transcript_id ENST00000378209.7; exons 7; 3.622181 chr1 IsoQuant gene 3889125 3900293 . - . gene_id ENSG00000198912.10; transcripts 3; gene_type protein_coding; gene_name C1orf174; havana_gene OTTHUMG00000003739.1; NA chr1 IsoQuant transcript 3889125 3900293 . - . gene_id ENSG00000198912.10; transcript_id transcript688.chr1.nnic; exons 5; 1.81109 chr1 IsoQuant transcript 3889125 3900293 . - . gene_id ENSG00000198912.10; transcript_id transcript693.chr1.nnic; exons 4; 1.81109 chr1 IsoQuant transcript 3889125 3900285 . - . gene_id ENSG00000198912.10; transcript_id ENST00000361605.3; exons 4; 35.316264 chr1 IsoQuant gene 5862810 5992473 . - . gene_id ENSG00000131697.17; transcripts 2; gene_type protein_coding; gene_name NPHP4; havana_gene OTTHUMG00000000701.6; NA chr1 IsoQuant transcript 5862810 5992441 . - . gene_id ENSG00000131697.17; transcript_id transcript701.chr1.nic; exons 30; 3.169408 chr1 IsoQuant transcript 5862818 5992471 . - . gene_id ENSG00000131697.17; transcript_id ENST00000378156.8; exons 30; 8.60268 chr1 IsoQuant gene 5991466 6101193 . + . gene_id ENSG00000069424.14; transcripts 2; gene_type protein_coding; gene_name KCNAB2; havana_gene OTTHUMG00000000795.9; NA chr1 IsoQuant transcript 6026013 6101192 . + . gene_id ENSG00000069424.14; transcript_id ENST00000341524.5; exons 16; 6.338817 chr1 IsoQuant transcript 6026013 6101192 . + . gene_id ENSG00000069424.14; transcript_id ENST00000352527.5; exons 15; 14.488724 chr1 IsoQuant gene 6181269 6209389 . - . gene_id ENSG00000116251.9; transcripts 2; gene_type protein_coding; gene_name RPL22; tag overlapping_locus; havana_gene OTTHUMG00000000953.5; NA chr1 IsoQuant transcript 6185020 6199612 . - . gene_id ENSG00000116251.9; transcript_id ENST00000234875.8; exons 4; 282.530114 chr1 IsoQuant transcript 6186575 6199563 . - . gene_id ENSG00000116251.9; transcript_id ENST00000480661.1; exons 3; 5.433271 chr1 IsoQuant gene 6221193 6235972 . - . gene_id ENSG00000116237.15; transcripts 2; gene_type protein_coding; gene_name ICMT; havana_gene OTTHUMG00000001254.2; NA chr1 IsoQuant transcript 6221193 6235940 . - . gene_id ENSG00000116237.15; transcript_id ENST00000343813.9; exons 5; 27.166357 chr1 IsoQuant transcript 6223491 6235972 . - . gene_id ENSG00000116237.15; transcript_id ENST00000489498.5; exons 6; 4.527726 chr1 IsoQuant gene 6264269 6394391 . - . gene_id ENSG00000097021.19; transcripts 2; gene_type protein_coding; gene_name ACOT7; havana_gene OTTHUMG00000001295.8; NA chr1 IsoQuant transcript 6264273 6385813 . - . gene_id ENSG00000097021.19; transcript_id ENST00000377855.6; exons 9; 1.358318 chr1 IsoQuant transcript 6264273 6394391 . - . gene_id ENSG00000097021.19; transcript_id ENST00000361521.8; exons 9; 15.847042 chr1 IsoQuant gene 6466092 6520061 . - . gene_id ENSG00000171680.21; transcripts 2; gene_type protein_coding; gene_name PLEKHG5; tag overlapping_locus; havana_gene OTTHUMG00000000905.4; NA chr1 IsoQuant transcript 6467122 6497390 . - . gene_id ENSG00000171680.21; transcript_id ENST00000400915.7; exons 22; 13.130406 chr1 IsoQuant transcript 6467122 6491700 . - . gene_id ENSG00000171680.21; transcript_id ENST00000377728.7; exons 21; 4.074954 chr1 IsoQuant gene 6521347 6554535 . - . gene_id ENSG00000162408.10; transcripts 1; gene_type protein_coding; gene_name NOL9; havana_gene OTTHUMG00000000904.1; NA chr1 IsoQuant transcript 6521347 6554535 . - . gene_id ENSG00000162408.10; transcript_id ENST00000377705.5; exons 12; 12.677633 chr1 IsoQuant gene 6579994 6589280 . + . gene_id ENSG00000204859.12; transcripts 5; gene_type protein_coding; gene_name ZBTB48; havana_gene OTTHUMG00000001438.4; NA chr1 IsoQuant transcript 6579994 6589280 . + . gene_id ENSG00000204859.12; transcript_id transcript742.chr1.nic; exons 11; 16.299814 chr1 IsoQuant transcript 6580014 6589280 . + . gene_id ENSG00000204859.12; transcript_id transcript746.chr1.nnic; exons 11; 1.81109 chr1 IsoQuant transcript 6580002 6589280 . + . gene_id ENSG00000204859.12; transcript_id transcript753.chr1.nic; exons 10; 3.622181 chr1 IsoQuant transcript 6579995 6589280 . + . gene_id ENSG00000204859.12; transcript_id transcript755.chr1.nnic; exons 9; 1.81109 chr1 IsoQuant transcript 6580048 6589280 . + . gene_id ENSG00000204859.12; transcript_id ENST00000377674.8; exons 11; 15.394269 chr1 IsoQuant gene 6590719 6614607 . - . gene_id ENSG00000162413.16; transcripts 2; gene_type protein_coding; gene_name KLHL21; havana_gene OTTHUMG00000001437.3; NA chr1 IsoQuant transcript 6590719 6602869 . - . gene_id ENSG00000162413.16; transcript_id transcript762.chr1.nic; exons 4; 12.677633 chr1 IsoQuant transcript 6590724 6602869 . - . gene_id ENSG00000162413.16; transcript_id ENST00000377658.8; exons 4; 105.043248 chr1 IsoQuant gene 6613685 6624033 . + . gene_id ENSG00000116273.5; transcripts 1; gene_type protein_coding; gene_name PHF13; havana_gene OTTHUMG00000001439.1; NA chr1 IsoQuant transcript 6613685 6624033 . + . gene_id ENSG00000116273.5; transcript_id ENST00000377648.4; exons 4; 27.166357 chr1 IsoQuant gene 6634168 6701924 . - . gene_id ENSG00000007923.15; transcripts 1; gene_type protein_coding; gene_name DNAJC11; havana_gene OTTHUMG00000001443.4; NA chr1 IsoQuant transcript 6634168 6701924 . - . gene_id ENSG00000007923.15; transcript_id ENST00000377577.9; exons 16; 185.636774 chr1 IsoQuant gene 6785324 7769706 . + . gene_id ENSG00000171735.18; transcripts 3; gene_type protein_coding; gene_name CAMTA1; tag ncRNA_host; havana_gene OTTHUMG00000001212.6; NA chr1 IsoQuant transcript 6785454 6872053 . + . gene_id ENSG00000171735.18; transcript_id ENST00000490738.5; exons 3; 18.563677 chr1 IsoQuant transcript 6785480 6872038 . + . gene_id ENSG00000171735.18; transcript_id ENST00000473578.5; exons 4; 76.518573 chr1 IsoQuant transcript 6785464 6888201 . + . gene_id ENSG00000171735.18; transcript_id ENST00000476163.5; exons 4; 14.488724 chr1 IsoQuant gene 7771269 7781432 . + . gene_id ENSG00000049245.12; transcripts 1; gene_type protein_coding; gene_name VAMP3; tag overlapping_locus; havana_gene OTTHUMG00000001225.3; NA chr1 IsoQuant transcript 7771269 7781432 . + . gene_id ENSG00000049245.12; transcript_id ENST00000054666.10; exons 5; 221.858583 chr1 IsoQuant gene 7784313 7845177 . + . gene_id ENSG00000049246.14; transcripts 1; gene_type protein_coding; gene_name PER3; havana_gene OTTHUMG00000001216.3; NA chr1 IsoQuant transcript 7784313 7812625 . + . gene_id ENSG00000049246.14; transcript_id transcript805.chr1.nic; exons 13; 3.622181 chr1 IsoQuant gene 7843083 7853512 . - . gene_id ENSG00000049247.13; transcripts 1; gene_type protein_coding; gene_name UTS2; havana_gene OTTHUMG00000001218.3; NA chr1 IsoQuant transcript 7847614 7853035 . - . gene_id ENSG00000049247.13; transcript_id ENST00000361696.9; exons 4; 1.81109 chr1 IsoQuant gene 7954291 7985505 . + . gene_id ENSG00000116288.12; transcripts 1; gene_type protein_coding; gene_name PARK7; havana_gene OTTHUMG00000001210.3; NA chr1 IsoQuant transcript 7961663 7985279 . + . gene_id ENSG00000116288.12; transcript_id ENST00000338639.9; exons 7; 211.444813 chr1 IsoQuant gene 8004404 8026312 . - . gene_id ENSG00000116285.12; transcripts 2; gene_type protein_coding; gene_name ERRFI1; havana_gene OTTHUMG00000001221.3; NA chr1 IsoQuant transcript 8011719 8026308 . - . gene_id ENSG00000116285.12; transcript_id ENST00000377482.9; exons 4; 9.055452 chr1 IsoQuant transcript 8011728 8026312 . - . gene_id ENSG00000116285.12; transcript_id transcript821.chr1.nic; exons 3; 2.716636 chr1 IsoQuant gene 8317826 8344167 . + . gene_id ENSG00000162426.14; transcripts 1; gene_type protein_coding; gene_name SLC45A1; tag ncRNA_host; havana_gene OTTHUMG00000000503.6; NA chr1 IsoQuant transcript 8317826 8344165 . + . gene_id ENSG00000162426.14; transcript_id ENST00000471889.5; exons 9; 2.716636 chr1 IsoQuant gene 8352397 8817643 . - . gene_id ENSG00000142599.17; transcripts 1; gene_type protein_coding; gene_name RERE; tag ncRNA_host; havana_gene OTTHUMG00000001765.7; NA chr1 IsoQuant transcript 8352402 8360421 . - . gene_id ENSG00000142599.17; transcript_id transcript824.chr1.nic; exons 6; 44.371717 chr1 IsoQuant gene 8861002 8879249 . - . gene_id ENSG00000074800.13; transcripts 1; gene_type protein_coding; gene_name ENO1; tag ncRNA_host; havana_gene OTTHUMG00000001773.5; NA chr1 IsoQuant transcript 8861002 8878690 . - . gene_id ENSG00000074800.13; transcript_id ENST00000234590.8; exons 12; 1526.142557 chr1 IsoQuant gene 9035107 9088478 . - . gene_id ENSG00000142583.17; transcripts 1; gene_type protein_coding; gene_name SLC2A5; havana_gene OTTHUMG00000001771.3; NA chr1 IsoQuant transcript 9035107 9069716 . - . gene_id ENSG00000142583.17; transcript_id ENST00000377424.8; exons 12; 15.394269 chr1 IsoQuant gene 9234775 9271337 . + . gene_id ENSG00000049239.12; transcripts 2; gene_type protein_coding; gene_name H6PD; havana_gene OTTHUMG00000001768.2; NA chr1 IsoQuant transcript 9234775 9271337 . + . gene_id ENSG00000049239.12; transcript_id ENST00000377403.6; exons 5; 58.860441 chr1 IsoQuant transcript 9239844 9267898 . + . gene_id ENSG00000049239.12; transcript_id ENST00000602477.1; exons 5; 20.82754 chr1 IsoQuant gene 9292880 9369532 . + . gene_id ENSG00000171621.13; transcripts 1; gene_type protein_coding; gene_name SPSB1; havana_gene OTTHUMG00000001279.4; NA chr1 IsoQuant transcript 9292880 9369532 . + . gene_id ENSG00000171621.13; transcript_id ENST00000328089.10; exons 3; 22.638631 chr1 IsoQuant gene 9651732 9729114 . + . gene_id ENSG00000171608.15; transcripts 2; gene_type protein_coding; gene_name PIK3CD; havana_gene OTTHUMG00000001450.2; NA chr1 IsoQuant transcript 9651745 9728919 . + . gene_id ENSG00000171608.15; transcript_id ENST00000377346.8; exons 24; 3.169408 chr1 IsoQuant transcript 9689530 9728911 . + . gene_id ENSG00000171608.15; transcript_id transcript880.chr1.nnic; exons 24; 2.263863 chr1 IsoQuant gene 9729016 9824526 . - . gene_id ENSG00000171603.16; transcripts 2; gene_type protein_coding; gene_name CLSTN1; havana_gene OTTHUMG00000001451.1; NA chr1 IsoQuant transcript 9729016 9824013 . - . gene_id ENSG00000171603.16; transcript_id transcript890.chr1.nic; exons 17; 95.236193 chr1 IsoQuant transcript 9729028 9823984 . - . gene_id ENSG00000171603.16; transcript_id ENST00000361311.4; exons 18; 39.545161 chr1 IsoQuant gene 9848276 9910336 . - . gene_id ENSG00000178585.14; transcripts 1; gene_type protein_coding; gene_name CTNNBIP1; havana_gene OTTHUMG00000001796.1; NA chr1 IsoQuant transcript 9848276 9910263 . - . gene_id ENSG00000178585.14; transcript_id ENST00000377263.5; exons 6; 5.433271 chr1 IsoQuant gene 9922113 9943407 . - . gene_id ENSG00000162441.11; transcripts 1; gene_type protein_coding; gene_name LZIC; havana_gene OTTHUMG00000001804.3; NA chr1 IsoQuant transcript 9930253 9943407 . - . gene_id ENSG00000162441.11; transcript_id ENST00000377213.1; exons 8; 4.527726 chr1 IsoQuant gene 9943428 9985501 . + . gene_id ENSG00000173614.13; transcripts 2; gene_type protein_coding; gene_name NMNAT1; tag ncRNA_host; havana_gene OTTHUMG00000001799.6; NA chr1 IsoQuant transcript 9943428 9981766 . + . gene_id ENSG00000173614.13; transcript_id ENST00000403197.5; exons 5; 3.622181 chr1 IsoQuant transcript 9943428 9985498 . + . gene_id ENSG00000173614.13; transcript_id ENST00000377205.5; exons 5; 13.583179 chr1 IsoQuant gene 9997206 10016020 . + . gene_id ENSG00000162444.11; transcripts 1; gene_type protein_coding; gene_name RBP7; havana_gene OTTHUMG00000001798.2; NA chr1 IsoQuant transcript 9997216 10016020 . + . gene_id ENSG00000162444.11; transcript_id ENST00000294435.7; exons 4; 2.716636 chr1 IsoQuant gene 10210566 10381603 . + . gene_id ENSG00000054523.17; transcripts 1; gene_type protein_coding; gene_name KIF1B; tag ncRNA_host; havana_gene OTTHUMG00000001817.2; NA chr1 IsoQuant transcript 10210566 10381599 . + . gene_id ENSG00000054523.17; transcript_id transcript926.chr1.nnic; exons 46; 10.866543 chr1 IsoQuant gene 10398592 10420144 . + . gene_id ENSG00000142657.20; transcripts 1; gene_type protein_coding; gene_name PGD; havana_gene OTTHUMG00000001905.4; NA chr1 IsoQuant transcript 10399080 10420144 . + . gene_id ENSG00000142657.20; transcript_id ENST00000270776.12; exons 13; 68.821438 chr1 IsoQuant gene 10456522 10472526 . - . gene_id ENSG00000160049.11; transcripts 2; gene_type protein_coding; gene_name DFFA; havana_gene OTTHUMG00000001909.3; NA chr1 IsoQuant transcript 10456522 10472526 . - . gene_id ENSG00000160049.11; transcript_id ENST00000377038.7; exons 6; 9.055452 chr1 IsoQuant transcript 10462468 10472488 . - . gene_id ENSG00000160049.11; transcript_id ENST00000377036.2; exons 5; 9.055452 chr1 IsoQuant gene 10472288 10630758 . + . gene_id ENSG00000142655.12; transcripts 1; gene_type protein_coding; gene_name PEX14; tag ncRNA_host; havana_gene OTTHUMG00000001908.2; NA chr1 IsoQuant transcript 10474887 10630758 . + . gene_id ENSG00000142655.12; transcript_id ENST00000356607.8; exons 9; 11.772088 chr1 IsoQuant gene 10636604 10796650 . - . gene_id ENSG00000130940.14; transcripts 1; gene_type protein_coding; gene_name CASZ1; havana_gene OTTHUMG00000002035.5; NA chr1 IsoQuant transcript 10647206 10694272 . - . gene_id ENSG00000130940.14; transcript_id transcript948.chr1.nic; exons 13; 2.716636 chr1 IsoQuant gene 11012344 11026420 . + . gene_id ENSG00000120948.16; transcripts 1; gene_type protein_coding; gene_name TARDBP; tag overlapping_locus; havana_gene OTTHUMG00000002120.15; NA chr1 IsoQuant transcript 11012400 11026420 . + . gene_id ENSG00000120948.16; transcript_id ENST00000240185.7; exons 6; 95.08225 chr1 IsoQuant gene 11054584 11060024 . - . gene_id ENSG00000116649.9; transcripts 1; gene_type protein_coding; gene_name SRM; havana_gene OTTHUMG00000002119.3; NA chr1 IsoQuant transcript 11054589 11060024 . - . gene_id ENSG00000116649.9; transcript_id ENST00000376957.6; exons 8; 158.470417 chr1 IsoQuant gene 11066618 11099881 . - . gene_id ENSG00000171824.13; transcripts 1; gene_type protein_coding; gene_name EXOSC10; havana_gene OTTHUMG00000002123.3; NA chr1 IsoQuant transcript 11066618 11099881 . - . gene_id ENSG00000171824.13; transcript_id ENST00000376936.8; exons 25; 41.655081 chr1 IsoQuant gene 11106535 11262507 . - . gene_id ENSG00000198793.12; transcripts 1; gene_type protein_coding; gene_name MTOR; havana_gene OTTHUMG00000002001.3; NA chr1 IsoQuant transcript 11106535 11262507 . - . gene_id ENSG00000198793.12; transcript_id ENST00000361445.8; exons 58; 11.772088 chr1 IsoQuant gene 11189341 11195981 . + . gene_id ENSG00000171819.4; transcripts 1; gene_type protein_coding; gene_name ANGPTL7; havana_gene OTTHUMG00000002002.3; NA chr1 IsoQuant transcript 11189341 11195981 . + . gene_id ENSG00000171819.4; transcript_id ENST00000376819.3; exons 5; 4.527726 chr1 IsoQuant gene 11273206 11296049 . + . gene_id ENSG00000120942.13; transcripts 1; gene_type protein_coding; gene_name UBIAD1; havana_gene OTTHUMG00000002075.2; NA chr1 IsoQuant transcript 11273206 11288434 . + . gene_id ENSG00000120942.13; transcript_id ENST00000376810.5; exons 2; 41.655081 chr1 IsoQuant gene 11637018 11655785 . - . gene_id ENSG00000116661.10; transcripts 1; gene_type protein_coding; gene_name FBXO2; havana_gene OTTHUMG00000002072.5; NA chr1 IsoQuant transcript 11648367 11654682 . - . gene_id ENSG00000116661.10; transcript_id ENST00000354287.4; exons 6; 59.765986 chr1 IsoQuant gene 11654375 11663327 . + . gene_id ENSG00000132879.13; transcripts 3; gene_type protein_coding; gene_name FBXO44; havana_gene OTTHUMG00000002071.6; NA chr1 IsoQuant transcript 11654859 11663326 . + . gene_id ENSG00000132879.13; transcript_id transcript988.chr1.nic; exons 5; 11.165373 chr1 IsoQuant transcript 11654375 11662289 . + . gene_id ENSG00000132879.13; transcript_id ENST00000251546.8; exons 5; 5.587214 chr1 IsoQuant transcript 11654910 11662291 . + . gene_id ENSG00000132879.13; transcript_id ENST00000376762.8; exons 5; 20.981483 chr1 IsoQuant gene 11664124 11674356 . + . gene_id ENSG00000116663.10; transcripts 2; gene_type protein_coding; gene_name FBXO6; havana_gene OTTHUMG00000002229.1; NA chr1 IsoQuant transcript 11664251 11674356 . + . gene_id ENSG00000116663.10; transcript_id transcript991.chr1.nnic; exons 6; 14.488724 chr1 IsoQuant transcript 11664124 11674354 . + . gene_id ENSG00000116663.10; transcript_id ENST00000376753.8; exons 6; 32.599629 chr1 IsoQuant gene 11674480 11691650 . - . gene_id ENSG00000116670.14; transcripts 3; gene_type protein_coding; gene_name MAD2L2; havana_gene OTTHUMG00000002231.4; NA chr1 IsoQuant transcript 11674480 11691650 . - . gene_id ENSG00000116670.14; transcript_id ENST00000235310.7; exons 11; 29.43022 chr1 IsoQuant transcript 11674480 11681150 . - . gene_id ENSG00000116670.14; transcript_id transcript994.chr1.nic; exons 8; 1.81109 chr1 IsoQuant transcript 11674481 11681214 . - . gene_id ENSG00000116670.14; transcript_id ENST00000376692.8; exons 9; 26.713585 chr1 IsoQuant gene 11736084 11754802 . + . gene_id ENSG00000177674.15; transcripts 3; gene_type protein_coding; gene_name AGTRAP; havana_gene OTTHUMG00000002230.5; NA chr1 IsoQuant transcript 11736132 11750770 . + . gene_id ENSG00000177674.15; transcript_id transcript1005.chr1.nic; exons 4; 4.527726 chr1 IsoQuant transcript 11736147 11750771 . + . gene_id ENSG00000177674.15; transcript_id ENST00000376629.8; exons 5; 18.110905 chr1 IsoQuant transcript 11736155 11750765 . + . gene_id ENSG00000177674.15; transcript_id ENST00000314340.9; exons 5; 74.25471 chr1 IsoQuant gene 11761787 11789585 . + . gene_id ENSG00000215910.7; transcripts 2; gene_type protein_coding; gene_name C1orf167; havana_gene OTTHUMG00000002228.2; NA chr1 IsoQuant transcript 11787788 11789584 . + . gene_id ENSG00000215910.7; transcript_id transcript1021.chr1.nic; exons 4; 2.716636 chr1 IsoQuant transcript 11787812 11789585 . + . gene_id ENSG00000215910.7; transcript_id ENST00000482358.1; exons 4; 6.338817 chr1 IsoQuant gene 11785723 11806920 . - . gene_id ENSG00000177000.11; transcripts 4; gene_type protein_coding; gene_name MTHFR; havana_gene OTTHUMG00000002277.5; NA chr1 IsoQuant transcript 11785732 11805413 . - . gene_id ENSG00000177000.11; transcript_id ENST00000376585.6; exons 13; 9.807055 chr1 IsoQuant transcript 11785753 11805952 . - . gene_id ENSG00000177000.11; transcript_id transcript1010.chr1.nic; exons 12; 5.732101 chr1 IsoQuant transcript 11785723 11805413 . - . gene_id ENSG00000177000.11; transcript_id ENST00000376592.6; exons 12; 6.184874 chr1 IsoQuant gene 11806096 11843144 . + . gene_id ENSG00000011021.21; transcripts 1; gene_type protein_coding; gene_name CLCN6; tag overlapping_locus; havana_gene OTTHUMG00000002299.4; NA chr1 IsoQuant transcript 11806211 11843144 . + . gene_id ENSG00000011021.21; transcript_id ENST00000346436.10; exons 23; 8.149907 chr1 IsoQuant gene 11919590 11926472 . - . gene_id ENSG00000116685.15; transcripts 3; gene_type protein_coding; gene_name KIAA2013; havana_gene OTTHUMG00000002391.1; NA chr1 IsoQuant transcript 11919590 11926472 . - . gene_id ENSG00000116685.15; transcript_id transcript1035.chr1.nnic; exons 4; 18.110905 chr1 IsoQuant transcript 11919591 11926423 . - . gene_id ENSG00000116685.15; transcript_id ENST00000376572.7; exons 3; 253.851497 chr1 IsoQuant transcript 11922175 11926428 . - . gene_id ENSG00000116685.15; transcript_id ENST00000376576.3; exons 2; 3.921011 chr1 IsoQuant gene 11934205 11975538 . + . gene_id ENSG00000083444.16; transcripts 1; gene_type protein_coding; gene_name PLOD1; havana_gene OTTHUMG00000002393.4; NA chr1 IsoQuant transcript 11934753 11975537 . + . gene_id ENSG00000083444.16; transcript_id ENST00000196061.4; exons 19; 124.965243 chr1 IsoQuant gene 11980181 12013520 . + . gene_id ENSG00000116688.16; transcripts 4; gene_type protein_coding; gene_name MFN2; havana_gene OTTHUMG00000002392.7; NA chr1 IsoQuant transcript 11980256 12013520 . + . gene_id ENSG00000116688.16; transcript_id transcript1053.chr1.nic; exons 20; 8.376293 chr1 IsoQuant transcript 11980240 12013520 . + . gene_id ENSG00000116688.16; transcript_id transcript1058.chr1.nic; exons 19; 8.675123 chr1 IsoQuant transcript 11980181 12013514 . + . gene_id ENSG00000116688.16; transcript_id ENST00000444836.5; exons 18; 6.864033 chr1 IsoQuant transcript 11980312 12013508 . + . gene_id ENSG00000116688.16; transcript_id ENST00000235329.9; exons 19; 86.552014 chr1 IsoQuant gene 12019455 12032045 . + . gene_id ENSG00000116691.10; transcripts 4; gene_type protein_coding; gene_name MIIP; tag ncRNA_host; havana_gene OTTHUMG00000002439.1; NA chr1 IsoQuant transcript 12019455 12032043 . + . gene_id ENSG00000116691.10; transcript_id transcript1064.chr1.nic; exons 9; 7.470748 chr1 IsoQuant transcript 12019455 12032043 . + . gene_id ENSG00000116691.10; transcript_id transcript1065.chr1.nic; exons 8; 6.565203 chr1 IsoQuant transcript 12019455 12032038 . + . gene_id ENSG00000116691.10; transcript_id transcript1066.chr1.nic; exons 7; 2.037477 chr1 IsoQuant transcript 12019466 12032045 . + . gene_id ENSG00000116691.10; transcript_id ENST00000235332.5; exons 10; 26.487198 chr1 IsoQuant gene 12167003 12209228 . + . gene_id ENSG00000028137.18; transcripts 2; gene_type protein_coding; gene_name TNFRSF1B; tag ncRNA_host; havana_gene OTTHUMG00000001829.1; NA chr1 IsoQuant transcript 12167003 12209228 . + . gene_id ENSG00000028137.18; transcript_id ENST00000376259.6; exons 10; 105.79485 chr1 IsoQuant transcript 12167003 12209228 . + . gene_id ENSG00000028137.18; transcript_id ENST00000492361.1; exons 9; 9.807055 chr1 IsoQuant gene 12567910 12617731 . - . gene_id ENSG00000162496.8; transcripts 1; gene_type protein_coding; gene_name DHRS3; tag ncRNA_host; havana_gene OTTHUMG00000001885.5; NA chr1 IsoQuant transcript 12567910 12617731 . - . gene_id ENSG00000162496.8; transcript_id ENST00000616661.4; exons 6; 74.25471 chr1 IsoQuant gene 13474977 13514048 . - . gene_id ENSG00000162494.5; transcripts 1; gene_type protein_coding; gene_name LRRC38; havana_gene OTTHUMG00000007918.1; NA chr1 IsoQuant transcript 13474977 13514048 . - . gene_id ENSG00000162494.5; transcript_id ENST00000376085.3; exons 2; 69.726983 chr1 IsoQuant gene 13487362 13493155 . + . gene_id novel_gene_chr1_1092; transcripts 1; NA chr1 IsoQuant transcript 13487362 13493155 . + . gene_id novel_gene_chr1_1092; transcript_id transcript1091.chr1.nnic; exons 3; 1.81109 chr1 IsoQuant gene 13583465 13617957 . + . gene_id ENSG00000162493.16; transcripts 1; gene_type protein_coding; gene_name PDPN; havana_gene OTTHUMG00000007912.5; NA chr1 IsoQuant transcript 13583465 13617957 . + . gene_id ENSG00000162493.16; transcript_id ENST00000294489.10; exons 6; 2.716636 chr1 IsoQuant gene 13700198 13825079 . + . gene_id ENSG00000116731.22; transcripts 2; gene_type protein_coding; gene_name PRDM2; havana_gene OTTHUMG00000007917.6; NA chr1 IsoQuant transcript 13704855 13825079 . + . gene_id ENSG00000116731.22; transcript_id ENST00000235372.11; exons 10; 1.81109 chr1 IsoQuant transcript 13700240 13825065 . + . gene_id ENSG00000116731.22; transcript_id ENST00000376048.9; exons 8; 1.81109 chr1 IsoQuant gene 13892792 15118043 . + . gene_id ENSG00000189337.16; transcripts 1; gene_type protein_coding; gene_name KAZN; havana_gene OTTHUMG00000002042.7; NA chr1 IsoQuant transcript 14924130 15068152 . + . gene_id ENSG00000189337.16; transcript_id ENST00000361144.9; exons 8; 44.371717 chr1 IsoQuant gene 15111815 15153614 . - . gene_id ENSG00000175147.11; transcripts 2; gene_type antisense_RNA; gene_name TMEM51-AS1; havana_gene OTTHUMG00000002043.5; NA chr1 IsoQuant transcript 15114204 15152475 . - . gene_id ENSG00000175147.11; transcript_id transcript1109.chr1.nnic; exons 5; 1.81109 chr1 IsoQuant transcript 15137336 15153614 . - . gene_id ENSG00000175147.11; transcript_id transcript1114.chr1.nnic; exons 3; 1.81109 chr1 IsoQuant gene 15152532 15220480 . + . gene_id ENSG00000171729.13; transcripts 5; gene_type protein_coding; gene_name TMEM51; havana_gene OTTHUMG00000002046.4; NA chr1 IsoQuant transcript 15152544 15220479 . + . gene_id ENSG00000171729.13; transcript_id transcript1111.chr1.nnic; exons 4; 13.809565 chr1 IsoQuant transcript 15152590 15220479 . + . gene_id ENSG00000171729.13; transcript_id transcript1115.chr1.nnic; exons 3; 3.848567 chr1 IsoQuant transcript 15152566 15220339 . + . gene_id ENSG00000171729.13; transcript_id ENST00000376014.7; exons 4; 1.81109 chr1 IsoQuant transcript 15153789 15220480 . + . gene_id ENSG00000171729.13; transcript_id ENST00000376008.2; exons 4; 21.959472 chr1 IsoQuant transcript 15153733 15220408 . + . gene_id ENSG00000171729.13; transcript_id ENST00000400796.7; exons 3; 6.565203 chr1 IsoQuant gene 15409880 15430343 . + . gene_id ENSG00000142634.12; transcripts 2; gene_type protein_coding; gene_name EFHD2; havana_gene OTTHUMG00000002254.1; NA chr1 IsoQuant transcript 15409880 15430338 . + . gene_id ENSG00000142634.12; transcript_id transcript1129.chr1.nnic; exons 3; 6.338817 chr1 IsoQuant transcript 15409895 15430343 . + . gene_id ENSG00000142634.12; transcript_id ENST00000375980.8; exons 4; 207.36986 chr1 IsoQuant gene 15456728 15472091 . + . gene_id ENSG00000142615.7; transcripts 1; gene_type protein_coding; gene_name CELA2A; tag overlapping_locus; havana_gene OTTHUMG00000002258.1; NA chr1 IsoQuant transcript 15456729 15472091 . + . gene_id ENSG00000142615.7; transcript_id ENST00000359621.4; exons 8; 8.149907 chr1 IsoQuant gene 15465909 15491400 . + . gene_id ENSG00000215704.9; transcripts 2; gene_type protein_coding; gene_name CELA2B; tag overlapping_locus; havana_gene OTTHUMG00000002259.2; NA chr1 IsoQuant transcript 15476088 15488094 . + . gene_id ENSG00000215704.9; transcript_id transcript1143.chr1.nnic; exons 7; 1.81109 chr1 IsoQuant transcript 15476101 15491400 . + . gene_id ENSG00000215704.9; transcript_id ENST00000375910.7; exons 8; 9.055452 chr1 IsoQuant gene 15490832 15526599 . - . gene_id ENSG00000132906.17; transcripts 3; gene_type protein_coding; gene_name CASP9; havana_gene OTTHUMG00000002256.7; NA chr1 IsoQuant transcript 15491401 15526599 . - . gene_id ENSG00000132906.17; transcript_id transcript1138.chr1.nnic; exons 9; 2.417806 chr1 IsoQuant transcript 15492270 15524295 . - . gene_id ENSG00000132906.17; transcript_id ENST00000333868.9; exons 9; 23.245346 chr1 IsoQuant transcript 15492270 15524347 . - . gene_id ENSG00000132906.17; transcript_id ENST00000348549.9; exons 5; 1.512261 chr1 IsoQuant gene 15526813 15592379 . + . gene_id ENSG00000116138.12; transcripts 2; gene_type protein_coding; gene_name DNAJC16; tag ncRNA_host; havana_gene OTTHUMG00000002358.3; NA chr1 IsoQuant transcript 15526813 15571733 . + . gene_id ENSG00000116138.12; transcript_id ENST00000375847.7; exons 15; 2.263863 chr1 IsoQuant transcript 15526813 15571731 . + . gene_id ENSG00000116138.12; transcript_id ENST00000616884.4; exons 14; 3.169408 chr1 IsoQuant gene 15571701 15585110 . - . gene_id ENSG00000116771.5; transcripts 1; gene_type protein_coding; gene_name AGMAT; havana_gene OTTHUMG00000002357.1; NA chr1 IsoQuant transcript 15571701 15585023 . - . gene_id ENSG00000116771.5; transcript_id transcript1148.chr1.nnic; exons 8; 1.81109 chr1 IsoQuant gene 15684289 15734769 . + . gene_id ENSG00000116786.11; transcripts 4; gene_type protein_coding; gene_name PLEKHM2; havana_gene OTTHUMG00000003062.1; NA chr1 IsoQuant transcript 15684289 15734768 . + . gene_id ENSG00000116786.11; transcript_id transcript1157.chr1.nic; exons 20; 6.11243 chr1 IsoQuant transcript 15684289 15734768 . + . gene_id ENSG00000116786.11; transcript_id transcript1159.chr1.nic; exons 19; 4.980499 chr1 IsoQuant transcript 15684332 15734769 . + . gene_id ENSG00000116786.11; transcript_id ENST00000375799.7; exons 20; 128.361038 chr1 IsoQuant transcript 15684390 15734769 . + . gene_id ENSG00000116786.11; transcript_id ENST00000375793.2; exons 19; 18.790064 chr1 IsoQuant gene 15756607 15786594 . + . gene_id ENSG00000162458.12; transcripts 3; gene_type protein_coding; gene_name FBLIM1; havana_gene OTTHUMG00000003079.7; NA chr1 IsoQuant transcript 15757913 15786593 . + . gene_id ENSG00000162458.12; transcript_id transcript1171.chr1.nic; exons 10; 5.723046 chr1 IsoQuant transcript 15758734 15786593 . + . gene_id ENSG00000162458.12; transcript_id transcript1175.chr1.nic; exons 9; 9.118841 chr1 IsoQuant transcript 15758419 15786594 . + . gene_id ENSG00000162458.12; transcript_id ENST00000375766.7; exons 9; 78.166665 chr1 IsoQuant gene 15941869 15976148 . - . gene_id ENSG00000116809.11; transcripts 4; gene_type protein_coding; gene_name ZBTB17; havana_gene OTTHUMG00000009377.3; NA chr1 IsoQuant transcript 15941871 15976148 . - . gene_id ENSG00000116809.11; transcript_id transcript1198.chr1.nnic; exons 15; 3.395795 chr1 IsoQuant transcript 15941871 15976089 . - . gene_id ENSG00000116809.11; transcript_id transcript1199.chr1.nic; exons 15; 2.943022 chr1 IsoQuant transcript 15941871 15976148 . - . gene_id ENSG00000116809.11; transcript_id transcript1200.chr1.nic; exons 15; 2.037477 chr1 IsoQuant transcript 15941869 15976126 . - . gene_id ENSG00000116809.11; transcript_id ENST00000375743.8; exons 16; 55.011873 chr1 IsoQuant gene 16014028 16019594 . - . gene_id ENSG00000173641.17; transcripts 3; gene_type protein_coding; gene_name HSPB7; havana_gene OTTHUMG00000009531.2; NA chr1 IsoQuant transcript 16014028 16018790 . - . gene_id ENSG00000173641.17; transcript_id ENST00000311890.13; exons 3; 552.246764 chr1 IsoQuant transcript 16014028 16018041 . - . gene_id ENSG00000173641.17; transcript_id ENST00000411503.5; exons 3; 25.898594 chr1 IsoQuant transcript 16014028 16018043 . - . gene_id ENSG00000173641.17; transcript_id ENST00000442459.2; exons 2; 43.33034 chr1 IsoQuant gene 16043736 16057308 . + . gene_id ENSG00000184908.17; transcripts 3; gene_type protein_coding; gene_name CLCNKB; havana_gene OTTHUMG00000009530.2; NA chr1 IsoQuant transcript 16043736 16057307 . + . gene_id ENSG00000184908.17; transcript_id transcript1239.chr1.nic; exons 20; 4.373784 chr1 IsoQuant transcript 16048789 16057308 . + . gene_id ENSG00000184908.17; transcript_id ENST00000375667.7; exons 13; 1.657148 chr1 IsoQuant transcript 16043777 16057308 . + . gene_id ENSG00000184908.17; transcript_id ENST00000375679.8; exons 20; 8.448737 chr1 IsoQuant gene 16057769 16073632 . - . gene_id ENSG00000185519.8; transcripts 2; gene_type protein_coding; gene_name FAM131C; havana_gene OTTHUMG00000009525.1; NA chr1 IsoQuant transcript 16057770 16068564 . - . gene_id ENSG00000185519.8; transcript_id transcript1243.chr1.nnic; exons 7; 4.527726 chr1 IsoQuant transcript 16057769 16073626 . - . gene_id ENSG00000185519.8; transcript_id ENST00000375662.4; exons 7; 27.166357 chr1 IsoQuant gene 16124337 16156087 . - . gene_id ENSG00000142627.12; transcripts 1; gene_type protein_coding; gene_name EPHA2; havana_gene OTTHUMG00000009527.2; NA chr1 IsoQuant transcript 16124337 16156087 . - . gene_id ENSG00000142627.12; transcript_id ENST00000358432.7; exons 17; 18.110905 chr1 IsoQuant gene 16155211 16183175 . + . gene_id ENSG00000227959.1; transcripts 2; gene_type antisense_RNA; gene_name AL451042.2; havana_gene OTTHUMG00000009528.1; NA chr1 IsoQuant transcript 16155215 16183175 . + . gene_id ENSG00000227959.1; transcript_id transcript1253.chr1.nnic; exons 3; 1.81109 chr1 IsoQuant transcript 16155211 16157329 . + . gene_id ENSG00000227959.1; transcript_id ENST00000424774.1; exons 2; 1.81109 chr1 IsoQuant gene 16197854 16212609 . - . gene_id ENSG00000142632.16; transcripts 3; gene_type protein_coding; gene_name ARHGEF19; havana_gene OTTHUMG00000002219.4; NA chr1 IsoQuant transcript 16197856 16208521 . - . gene_id ENSG00000142632.16; transcript_id transcript1256.chr1.nic; exons 14; 19.469223 chr1 IsoQuant transcript 16198098 16207657 . - . gene_id ENSG00000142632.16; transcript_id transcript1257.chr1.nic; exons 12; 14.941496 chr1 IsoQuant transcript 16198102 16206563 . - . gene_id ENSG00000142632.16; transcript_id transcript1261.chr1.nic; exons 10; 5.433271 chr1 IsoQuant gene 16228676 16237190 . - . gene_id ENSG00000132881.11; transcripts 2; gene_type protein_coding; gene_name RSG1; havana_gene OTTHUMG00000002214.4; NA chr1 IsoQuant transcript 16228676 16237190 . - . gene_id ENSG00000132881.11; transcript_id transcript1268.chr1.nnic; exons 5; 45.277262 chr1 IsoQuant transcript 16231700 16237162 . - . gene_id ENSG00000132881.11; transcript_id ENST00000375599.7; exons 5; 4.527726 chr1 IsoQuant gene 16246839 16352483 . - . gene_id ENSG00000037637.10; transcripts 2; gene_type protein_coding; gene_name FBXO42; havana_gene OTTHUMG00000002218.2; NA chr1 IsoQuant transcript 16246850 16352483 . - . gene_id ENSG00000037637.10; transcript_id transcript1271.chr1.nnic; exons 11; 9.960998 chr1 IsoQuant transcript 16246839 16352454 . - . gene_id ENSG00000037637.10; transcript_id ENST00000375592.7; exons 10; 26.260812 chr1 IsoQuant gene 16352575 16398145 . + . gene_id ENSG00000055070.16; transcripts 2; gene_type protein_coding; gene_name SZRD1; havana_gene OTTHUMG00000002217.5; NA chr1 IsoQuant transcript 16367083 16398142 . + . gene_id ENSG00000055070.16; transcript_id ENST00000401088.8; exons 4; 46.63558 chr1 IsoQuant transcript 16367225 16398145 . + . gene_id ENSG00000055070.16; transcript_id ENST00000401089.3; exons 3; 70.179756 chr1 IsoQuant gene 16440672 16460078 . + . gene_id ENSG00000157191.19; transcripts 4; gene_type protein_coding; gene_name NECAP2; havana_gene OTTHUMG00000002313.4; NA chr1 IsoQuant transcript 16440672 16460078 . + . gene_id ENSG00000157191.19; transcript_id ENST00000337132.9; exons 8; 145.340011 chr1 IsoQuant transcript 16440736 16460077 . + . gene_id ENSG00000157191.19; transcript_id ENST00000443980.6; exons 7; 4.527726 chr1 IsoQuant transcript 16440758 16460077 . + . gene_id ENSG00000157191.19; transcript_id ENST00000496239.5; exons 7; 2.263863 chr1 IsoQuant transcript 16440736 16441619 . + . gene_id ENSG00000157191.19; transcript_id ENST00000486390.1; exons 2; 2.716636 chr1 IsoQuant gene 16562319 16613591 . - . gene_id ENSG00000219481.10; transcripts 9; gene_type protein_coding; gene_name NBPF1; havana_gene OTTHUMG00000002487.10; NA chr1 IsoQuant transcript 16562426 16613527 . - . gene_id ENSG00000219481.10; transcript_id transcript1306.chr1.nnic; exons 29; 2.263863 chr1 IsoQuant transcript 16562426 16613591 . - . gene_id ENSG00000219481.10; transcript_id transcript1307.chr1.nnic; exons 29; 3.169408 chr1 IsoQuant transcript 16594023 16613591 . - . gene_id ENSG00000219481.10; transcript_id transcript1349.chr1.nic; exons 4; 1.81109 chr1 IsoQuant transcript 16595736 16613591 . - . gene_id ENSG00000219481.10; transcript_id transcript1352.chr1.nnic; exons 3; 1.81109 chr1 IsoQuant transcript 16599596 16613591 . - . gene_id ENSG00000219481.10; transcript_id transcript1353.chr1.nnic; exons 3; 2.716636 chr1 IsoQuant transcript 16599596 16613304 . - . gene_id ENSG00000219481.10; transcript_id transcript1357.chr1.nnic; exons 3; 6.791589 chr1 IsoQuant transcript 16599596 16613591 . - . gene_id ENSG00000219481.10; transcript_id transcript1358.chr1.nnic; exons 3; 37.127355 chr1 IsoQuant transcript 16599589 16613562 . - . gene_id ENSG00000219481.10; transcript_id ENST00000599069.5; exons 3; 4.980499 chr1 IsoQuant transcript 16605406 16613534 . - . gene_id ENSG00000219481.10; transcript_id ENST00000449853.2; exons 3; 11.772088 chr1 IsoQuant gene 16618253 16657232 . - . gene_id ENSG00000215908.10; transcripts 7; gene_type transcribed_unprocessed_pseudogene; gene_name CROCCP2; tag overlapping_locus; havana_gene OTTHUMG00000037884.9; NA chr1 IsoQuant transcript 16618256 16644762 . - . gene_id ENSG00000215908.10; transcript_id transcript1323.chr1.nnic; exons 15; 1.937867 chr1 IsoQuant transcript 16618258 16644762 . - . gene_id ENSG00000215908.10; transcript_id transcript1326.chr1.nic; exons 14; 7.371138 chr1 IsoQuant transcript 16618258 16644762 . - . gene_id ENSG00000215908.10; transcript_id transcript1327.chr1.nnic; exons 14; 2.843412 chr1 IsoQuant transcript 16618258 16644762 . - . gene_id ENSG00000215908.10; transcript_id transcript1333.chr1.nnic; exons 13; 4.20173 chr1 IsoQuant transcript 16618259 16644717 . - . gene_id ENSG00000215908.10; transcript_id transcript1336.chr1.nnic; exons 13; 1.937867 chr1 IsoQuant transcript 16618258 16644717 . - . gene_id ENSG00000215908.10; transcript_id transcript1340.chr1.nnic; exons 12; 3.296185 chr1 IsoQuant transcript 16618273 16644686 . - . gene_id ENSG00000215908.10; transcript_id ENST00000639456.1; exons 13; 2.716636 chr1 IsoQuant gene 16888538 16889649 . - . gene_id ENSG00000238142.1; transcripts 2; gene_type lincRNA; gene_name BX284668.5; havana_gene OTTHUMG00000002204.1; NA chr1 IsoQuant transcript 16888542 16889649 . - . gene_id ENSG00000238142.1; transcript_id ENST00000457075.1; exons 2; 3.622181 chr1 IsoQuant gene 16974502 16980835 . - . gene_id ENSG00000117122.13; transcripts 1; gene_type protein_coding; gene_name MFAP2; havana_gene OTTHUMG00000002290.1; NA chr1 IsoQuant transcript 16974502 16980835 . - . gene_id ENSG00000117122.13; transcript_id ENST00000375535.3; exons 9; 1.81109 chr1 IsoQuant gene 16985957 17011959 . - . gene_id ENSG00000159363.17; transcripts 3; gene_type protein_coding; gene_name ATP13A2; havana_gene OTTHUMG00000002293.4; NA chr1 IsoQuant transcript 16985957 17011950 . - . gene_id ENSG00000159363.17; transcript_id transcript1377.chr1.nic; exons 29; 5.288384 chr1 IsoQuant transcript 16985957 17011959 . - . gene_id ENSG00000159363.17; transcript_id transcript1380.chr1.nic; exons 29; 7.398305 chr1 IsoQuant transcript 16985958 17011928 . - . gene_id ENSG00000159363.17; transcript_id ENST00000452699.5; exons 29; 142.777318 chr1 IsoQuant gene 17018722 17054170 . - . gene_id ENSG00000117118.9; transcripts 1; gene_type protein_coding; gene_name SDHB; havana_gene OTTHUMG00000002289.3; NA chr1 IsoQuant transcript 17018722 17054170 . - . gene_id ENSG00000117118.9; transcript_id ENST00000375499.7; exons 8; 112.28761 chr1 IsoQuant gene 17406757 17439724 . - . gene_id ENSG00000179051.13; transcripts 2; gene_type protein_coding; gene_name RCC2; havana_gene OTTHUMG00000002513.1; NA chr1 IsoQuant transcript 17406757 17438436 . - . gene_id ENSG00000179051.13; transcript_id transcript1407.chr1.nnic; exons 12; 1.81109 chr1 IsoQuant transcript 17406760 17439724 . - . gene_id ENSG00000179051.13; transcript_id ENST00000375436.8; exons 13; 37.127355 chr1 IsoQuant gene 17539675 17697874 . + . gene_id ENSG00000074964.16; transcripts 6; gene_type protein_coding; gene_name ARHGEF10L; havana_gene OTTHUMG00000002514.3; NA chr1 IsoQuant transcript 17539675 17697874 . + . gene_id ENSG00000074964.16; transcript_id transcript1409.chr1.nnic; exons 29; 3.595015 chr1 IsoQuant transcript 17539675 17697874 . + . gene_id ENSG00000074964.16; transcript_id transcript1413.chr1.nic; exons 28; 41.627915 chr1 IsoQuant transcript 17539675 17697874 . + . gene_id ENSG00000074964.16; transcript_id transcript1415.chr1.nnic; exons 27; 4.50056 chr1 IsoQuant transcript 17618315 17697874 . + . gene_id ENSG00000074964.16; transcript_id transcript1418.chr1.nic; exons 21; 3.595015 chr1 IsoQuant transcript 17618315 17697874 . + . gene_id ENSG00000074964.16; transcript_id transcript1419.chr1.nnic; exons 21; 3.051687 chr1 IsoQuant transcript 17618316 17697868 . + . gene_id ENSG00000074964.16; transcript_id ENST00000375408.7; exons 20; 15.185994 chr1 IsoQuant gene 18107746 18378483 . + . gene_id ENSG00000117154.11; transcripts 1; gene_type protein_coding; gene_name IGSF21; tag overlapping_locus; havana_gene OTTHUMG00000002432.3; NA chr1 IsoQuant transcript 18107746 18378482 . + . gene_id ENSG00000117154.11; transcript_id ENST00000251296.3; exons 10; 9.055452 chr1 IsoQuant gene 18871430 18902781 . - . gene_id ENSG00000159423.16; transcripts 2; gene_type protein_coding; gene_name ALDH4A1; tag ncRNA_host; havana_gene OTTHUMG00000002443.6; NA chr1 IsoQuant transcript 18871432 18902781 . - . gene_id ENSG00000159423.16; transcript_id ENST00000375341.7; exons 15; 139.300024 chr1 IsoQuant transcript 18871432 18902528 . - . gene_id ENSG00000159423.16; transcript_id ENST00000538839.5; exons 14; 5.732101 chr1 IsoQuant gene 18904281 18956686 . - . gene_id ENSG00000169991.10; transcripts 1; gene_type protein_coding; gene_name IFFO2; tag overlapping_locus; havana_gene OTTHUMG00000002499.2; NA chr1 IsoQuant transcript 18904281 18956686 . - . gene_id ENSG00000169991.10; transcript_id ENST00000455833.6; exons 9; 1.81109 chr1 IsoQuant gene 19074506 19210276 . - . gene_id ENSG00000127481.14; transcripts 1; gene_type protein_coding; gene_name UBR4; tag overlapping_locus; havana_gene OTTHUMG00000002498.5; NA chr1 IsoQuant transcript 19074506 19210276 . - . gene_id ENSG00000127481.14; transcript_id ENST00000375254.7; exons 106; 8.149907 chr1 IsoQuant gene 19215664 19251552 . - . gene_id ENSG00000127463.14; transcripts 2; gene_type protein_coding; gene_name EMC1; havana_gene OTTHUMG00000002497.5; NA chr1 IsoQuant transcript 19215671 19251552 . - . gene_id ENSG00000127463.14; transcript_id transcript1439.chr1.nic; exons 23; 3.169408 chr1 IsoQuant transcript 19215664 19251552 . - . gene_id ENSG00000127463.14; transcript_id ENST00000477853.5; exons 23; 91.007296 chr1 IsoQuant gene 19251539 19260132 . + . gene_id ENSG00000053372.4; transcripts 2; gene_type protein_coding; gene_name MRTO4; havana_gene OTTHUMG00000002496.2; NA chr1 IsoQuant transcript 19251539 19260128 . + . gene_id ENSG00000053372.4; transcript_id ENST00000330263.4; exons 8; 52.974396 chr1 IsoQuant transcript 19251547 19260132 . + . gene_id ENSG00000053372.4; transcript_id transcript1447.chr1.nic; exons 6; 3.169408 chr1 IsoQuant gene 19303965 19312146 . - . gene_id ENSG00000053371.12; transcripts 1; gene_type protein_coding; gene_name AKR7A2; tag ncRNA_host; havana_gene OTTHUMG00000002522.2; NA chr1 IsoQuant transcript 19303965 19312146 . - . gene_id ENSG00000053371.12; transcript_id ENST00000235835.7; exons 7; 231.819581 chr1 IsoQuant gene 19312258 19329301 . + . gene_id ENSG00000040487.12; transcripts 4; gene_type protein_coding; gene_name PQLC2; havana_gene OTTHUMG00000002521.7; NA chr1 IsoQuant transcript 19312258 19329301 . + . gene_id ENSG00000040487.12; transcript_id transcript1454.chr1.nic; exons 9; 9.888554 chr1 IsoQuant transcript 19312326 19329300 . + . gene_id ENSG00000040487.12; transcript_id ENST00000375155.7; exons 9; 27.999459 chr1 IsoQuant transcript 19312328 19329280 . + . gene_id ENSG00000040487.12; transcript_id ENST00000375153.7; exons 8; 18.790064 chr1 IsoQuant transcript 19312341 19329300 . + . gene_id ENSG00000040487.12; transcript_id ENST00000400548.6; exons 8; 3.096965 chr1 IsoQuant gene 19338776 19485539 . - . gene_id ENSG00000077549.17; transcripts 2; gene_type protein_coding; gene_name CAPZB; havana_gene OTTHUMG00000002556.6; NA chr1 IsoQuant transcript 19338779 19419751 . - . gene_id ENSG00000077549.17; transcript_id ENST00000375144.5; exons 8; 31.694083 chr1 IsoQuant transcript 19374175 19485488 . - . gene_id ENSG00000077549.17; transcript_id ENST00000482808.1; exons 5; 11.772088 chr1 IsoQuant gene 19596977 19629821 . + . gene_id ENSG00000173436.13; transcripts 3; gene_type protein_coding; gene_name MINOS1; tag overlapping_locus; havana_gene OTTHUMG00000002712.2; NA chr1 IsoQuant transcript 19596977 19629821 . + . gene_id ENSG00000173436.13; transcript_id ENST00000617872.4; exons 3; 5.433271 chr1 IsoQuant transcript 19597001 19626623 . + . gene_id ENSG00000173436.13; transcript_id ENST00000467029.5; exons 5; 7.244362 chr1 IsoQuant gene 19640554 19658456 . + . gene_id ENSG00000158747.13; transcripts 1; gene_type protein_coding; gene_name NBL1; tag overlapping_locus; havana_gene OTTHUMG00000002700.7; NA chr1 IsoQuant transcript 19644163 19658452 . + . gene_id ENSG00000158747.13; transcript_id ENST00000375136.7; exons 4; 73.349164 chr1 IsoQuant gene 19682212 19800037 . - . gene_id ENSG00000162542.13; transcripts 6; gene_type protein_coding; gene_name TMCO4; havana_gene OTTHUMG00000002697.1; NA chr1 IsoQuant transcript 19682212 19799920 . - . gene_id ENSG00000162542.13; transcript_id transcript1505.chr1.nnic; exons 16; 5.61438 chr1 IsoQuant transcript 19682212 19800037 . - . gene_id ENSG00000162542.13; transcript_id transcript1513.chr1.nic; exons 15; 28.253011 chr1 IsoQuant transcript 19682212 19799915 . - . gene_id ENSG00000162542.13; transcript_id transcript1517.chr1.nic; exons 15; 5.79549 chr1 IsoQuant transcript 19682212 19799931 . - . gene_id ENSG00000162542.13; transcript_id transcript1518.chr1.nnic; exons 15; 3.078854 chr1 IsoQuant transcript 19682212 19800037 . - . gene_id ENSG00000162542.13; transcript_id transcript1523.chr1.nic; exons 14; 8.512125 chr1 IsoQuant transcript 19682213 19799917 . - . gene_id ENSG00000162542.13; transcript_id ENST00000294543.10; exons 16; 12.858742 chr1 IsoQuant gene 20184242 20186486 . - . gene_id ENSG00000225986.1; transcripts 1; gene_type antisense_RNA; gene_name UBXN10-AS1; havana_gene OTTHUMG00000002706.1; NA chr1 IsoQuant transcript 20184242 20186486 . - . gene_id ENSG00000225986.1; transcript_id ENST00000442226.1; exons 2; 1.81109 chr1 IsoQuant gene 20186085 20196048 . + . gene_id ENSG00000162543.5; transcripts 1; gene_type protein_coding; gene_name UBXN10; havana_gene OTTHUMG00000002708.1; NA chr1 IsoQuant transcript 20186085 20196048 . + . gene_id ENSG00000162543.5; transcript_id ENST00000375099.3; exons 2; 1.81109 chr1 IsoQuant gene 20360579 20431234 . - . gene_id ENSG00000236963.6; transcripts 1; gene_type lincRNA; gene_name LINC01141; tag overlapping_locus; havana_gene OTTHUMG00000002842.2; NA chr1 IsoQuant transcript 20375720 20382129 . - . gene_id ENSG00000236963.6; transcript_id transcript1529.chr1.nnic; exons 3; 1.81109 chr1 IsoQuant gene 20482391 20486220 . - . gene_id ENSG00000162545.5; transcripts 1; gene_type protein_coding; gene_name CAMK2N1; havana_gene OTTHUMG00000002837.1; NA chr1 IsoQuant transcript 20482391 20486220 . - . gene_id ENSG00000162545.5; transcript_id ENST00000375078.3; exons 2; 46.182807 chr1 IsoQuant gene 20499448 20508161 . - . gene_id ENSG00000090432.6; transcripts 1; gene_type protein_coding; gene_name MUL1; havana_gene OTTHUMG00000002838.2; NA chr1 IsoQuant transcript 20499448 20508161 . - . gene_id ENSG00000090432.6; transcript_id ENST00000264198.4; exons 4; 85.121252 chr1 IsoQuant gene 20552439 20556150 . + . gene_id ENSG00000183114.7; transcripts 1; gene_type protein_coding; gene_name FAM43B; havana_gene OTTHUMG00000057491.1; NA chr1 IsoQuant transcript 20554561 20556150 . + . gene_id ENSG00000183114.7; transcript_id transcript1540.chr1.nnic; exons 3; 1.81109 chr1 IsoQuant gene 20588948 20618908 . + . gene_id ENSG00000158825.5; transcripts 2; gene_type protein_coding; gene_name CDA; havana_gene OTTHUMG00000002845.1; NA chr1 IsoQuant transcript 20588948 20618908 . + . gene_id ENSG00000158825.5; transcript_id ENST00000375071.3; exons 4; 2.716636 chr1 IsoQuant gene 20633455 20651511 . + . gene_id ENSG00000158828.7; transcripts 1; gene_type protein_coding; gene_name PINK1; tag ncRNA_host; havana_gene OTTHUMG00000002841.1; NA chr1 IsoQuant transcript 20633455 20651511 . + . gene_id ENSG00000158828.7; transcript_id ENST00000321556.4; exons 8; 1439.001938 chr1 IsoQuant gene 20664014 20718017 . - . gene_id ENSG00000117245.12; transcripts 2; gene_type protein_coding; gene_name KIF17; tag overlapping_locus; havana_gene OTTHUMG00000002863.3; NA chr1 IsoQuant transcript 20664016 20685339 . - . gene_id ENSG00000117245.12; transcript_id transcript1575.chr1.nic; exons 7; 15.095439 chr1 IsoQuant transcript 20664014 20685187 . - . gene_id ENSG00000117245.12; transcript_id ENST00000477167.5; exons 6; 7.851077 chr1 IsoQuant gene 20742424 20787347 . - . gene_id ENSG00000127483.17; transcripts 4; gene_type protein_coding; gene_name HP1BP3; havana_gene OTTHUMG00000002622.7; NA chr1 IsoQuant transcript 20742424 20786660 . - . gene_id ENSG00000127483.17; transcript_id transcript1595.chr1.nic; exons 13; 11.083874 chr1 IsoQuant transcript 20742424 20787347 . - . gene_id ENSG00000127483.17; transcript_id transcript1597.chr1.nic; exons 13; 80.204142 chr1 IsoQuant transcript 20742424 20787335 . - . gene_id ENSG00000127483.17; transcript_id transcript1605.chr1.nic; exons 12; 88.055219 chr1 IsoQuant transcript 20742661 20786688 . - . gene_id ENSG00000127483.17; transcript_id ENST00000312239.9; exons 13; 10.929931 chr1 IsoQuant gene 20806292 21176888 . - . gene_id ENSG00000075151.20; transcripts 1; gene_type protein_coding; gene_name EIF4G3; tag ncRNA_host; havana_gene OTTHUMG00000002624.7; NA chr1 IsoQuant transcript 20806483 21176850 . - . gene_id ENSG00000075151.20; transcript_id ENST00000602326.5; exons 35; 9.960998 chr1 IsoQuant gene 21217247 21345920 . - . gene_id ENSG00000117298.14; transcripts 2; gene_type protein_coding; gene_name ECE1; havana_gene OTTHUMG00000002625.3; NA chr1 IsoQuant transcript 21217247 21345920 . - . gene_id ENSG00000117298.14; transcript_id transcript1615.chr1.nnic; exons 20; 7.851077 chr1 IsoQuant transcript 21217247 21345504 . - . gene_id ENSG00000117298.14; transcript_id ENST00000415912.6; exons 19; 342.2961 chr1 IsoQuant gene 21439864 21485005 . + . gene_id ENSG00000142794.18; transcripts 6; gene_type protein_coding; gene_name NBPF3; havana_gene OTTHUMG00000002944.7; NA chr1 IsoQuant transcript 21439864 21484899 . + . gene_id ENSG00000142794.18; transcript_id transcript1636.chr1.nnic; exons 20; 1.81109 chr1 IsoQuant transcript 21440134 21484901 . + . gene_id ENSG00000142794.18; transcript_id transcript1638.chr1.nnic; exons 19; 1.9922 chr1 IsoQuant transcript 21440119 21484901 . + . gene_id ENSG00000142794.18; transcript_id transcript1639.chr1.nnic; exons 19; 2.897745 chr1 IsoQuant transcript 21440086 21484901 . + . gene_id ENSG00000142794.18; transcript_id transcript1641.chr1.nnic; exons 19; 5.61438 chr1 IsoQuant transcript 21440123 21484901 . + . gene_id ENSG00000142794.18; transcript_id transcript1647.chr1.nnic; exons 18; 1.9922 chr1 IsoQuant transcript 21440087 21484901 . + . gene_id ENSG00000142794.18; transcript_id transcript1648.chr1.nic; exons 18; 4.708835 chr1 IsoQuant gene 21508656 21578412 . + . gene_id ENSG00000162551.13; transcripts 2; gene_type protein_coding; gene_name ALPL; havana_gene OTTHUMG00000002949.2; NA chr1 IsoQuant transcript 21508656 21578412 . + . gene_id ENSG00000162551.13; transcript_id transcript1654.chr1.nnic; exons 12; 22.638631 chr1 IsoQuant transcript 21509372 21578412 . + . gene_id ENSG00000162551.13; transcript_id ENST00000374840.7; exons 12; 163.903688 chr1 IsoQuant gene 21596215 21669420 . - . gene_id ENSG00000076864.19; transcripts 4; gene_type protein_coding; gene_name RAP1GAP; havana_gene OTTHUMG00000007513.12; NA chr1 IsoQuant transcript 21596216 21669420 . - . gene_id ENSG00000076864.19; transcript_id transcript1689.chr1.nic; exons 25; 9.236561 chr1 IsoQuant transcript 21596221 21622568 . - . gene_id ENSG00000076864.19; transcript_id ENST00000374761.6; exons 23; 22.176803 chr1 IsoQuant transcript 21596221 21669306 . - . gene_id ENSG00000076864.19; transcript_id ENST00000374765.8; exons 25; 58.398612 chr1 IsoQuant transcript 21596215 21669363 . - . gene_id ENSG00000076864.19; transcript_id ENST00000290101.8; exons 27; 1.222486 chr1 IsoQuant gene 21678298 21783606 . - . gene_id ENSG00000090686.15; transcripts 2; gene_type protein_coding; gene_name USP48; havana_gene OTTHUMG00000007798.4; NA chr1 IsoQuant transcript 21678579 21783606 . - . gene_id ENSG00000090686.15; transcript_id ENST00000308271.13; exons 27; 49.804988 chr1 IsoQuant transcript 21678902 21783217 . - . gene_id ENSG00000090686.15; transcript_id transcript1715.chr1.nnic; exons 26; 5.433271 chr1 IsoQuant gene 21822245 21937297 . - . gene_id ENSG00000142798.17; transcripts 2; gene_type protein_coding; gene_name HSPG2; havana_gene OTTHUMG00000002674.8; NA chr1 IsoQuant transcript 21822245 21937297 . - . gene_id ENSG00000142798.17; transcript_id ENST00000374695.7; exons 97; 58.407668 chr1 IsoQuant transcript 21822245 21830713 . - . gene_id ENSG00000142798.17; transcript_id ENST00000486901.1; exons 11; 26.713585 chr1 IsoQuant transcript 21877516 21937306 . - . gene_id ENSG00000142798.17; transcript_id transcript1736.chr1.nic; exons 22; 2.716636 chr1 IsoQuant gene 22024558 22031223 . + . gene_id ENSG00000218510.7; transcripts 1; gene_type transcribed_processed_pseudogene; gene_name LINC00339; havana_gene OTTHUMG00000002757.4; NA chr1 IsoQuant transcript 22025511 22031223 . + . gene_id ENSG00000218510.7; transcript_id ENST00000416769.2; exons 2; 17.20536 chr1 IsoQuant gene 22052627 22092949 . + . gene_id ENSG00000070831.15; transcripts 2; gene_type protein_coding; gene_name CDC42; tag overlapping_locus; havana_gene OTTHUMG00000002753.5; NA chr1 IsoQuant transcript 22052668 22092946 . + . gene_id ENSG00000070831.15; transcript_id ENST00000344548.7; exons 7; 209.633723 chr1 IsoQuant transcript 22052666 22092949 . + . gene_id ENSG00000070831.15; transcript_id transcript1744.chr1.nic; exons 6; 225.027992 chr1 IsoQuant gene 22117305 22143969 . - . gene_id ENSG00000162552.14; transcripts 1; gene_type protein_coding; gene_name WNT4; havana_gene OTTHUMG00000002894.3; NA chr1 IsoQuant transcript 22117305 22142966 . - . gene_id ENSG00000162552.14; transcript_id ENST00000290167.10; exons 5; 1.81109 chr1 IsoQuant gene 22451851 22531157 . + . gene_id ENSG00000184677.16; transcripts 3; gene_type protein_coding; gene_name ZBTB40; tag overlapping_locus; havana_gene OTTHUMG00000002897.2; NA chr1 IsoQuant transcript 22451851 22531157 . + . gene_id ENSG00000184677.16; transcript_id ENST00000404138.5; exons 19; 6.945532 chr1 IsoQuant transcript 22456567 22530699 . + . gene_id ENSG00000184677.16; transcript_id transcript1754.chr1.nnic; exons 18; 7.851077 chr1 IsoQuant transcript 22451851 22531157 . + . gene_id ENSG00000184677.16; transcript_id ENST00000374651.8; exons 16; 6.945532 chr1 IsoQuant gene 22636506 22639608 . + . gene_id ENSG00000173372.16; transcripts 1; gene_type protein_coding; gene_name C1QA; havana_gene OTTHUMG00000002893.4; NA chr1 IsoQuant transcript 22636506 22639608 . + . gene_id ENSG00000173372.16; transcript_id ENST00000374642.7; exons 3; 509.369197 chr1 IsoQuant gene 22643630 22648110 . + . gene_id ENSG00000159189.11; transcripts 2; gene_type protein_coding; gene_name C1QC; havana_gene OTTHUMG00000002891.2; NA chr1 IsoQuant transcript 22643630 22648110 . + . gene_id ENSG00000159189.11; transcript_id ENST00000374640.8; exons 3; 559.626957 chr1 IsoQuant transcript 22643633 22648110 . + . gene_id ENSG00000159189.11; transcript_id ENST00000374639.7; exons 3; 60.671531 chr1 IsoQuant gene 22652762 22661538 . + . gene_id ENSG00000173369.15; transcripts 1; gene_type protein_coding; gene_name C1QB; havana_gene OTTHUMG00000002896.4; NA chr1 IsoQuant transcript 22652981 22661538 . + . gene_id ENSG00000173369.15; transcript_id ENST00000509305.5; exons 3; 491.557122 chr1 IsoQuant gene 22710839 22921500 . + . gene_id ENSG00000133216.16; transcripts 1; gene_type protein_coding; gene_name EPHB2; tag ncRNA_host; havana_gene OTTHUMG00000002881.4; NA chr1 IsoQuant transcript 22774438 22915329 . + . gene_id ENSG00000133216.16; transcript_id transcript1784.chr1.nnic; exons 16; 8.149907 chr1 IsoQuant gene 23019448 23083689 . + . gene_id ENSG00000004487.15; transcripts 2; gene_type protein_coding; gene_name KDM1A; tag ncRNA_host; havana_gene OTTHUMG00000003220.6; NA chr1 IsoQuant transcript 23019448 23083689 . + . gene_id ENSG00000004487.15; transcript_id ENST00000356634.7; exons 19; 101.99156 chr1 IsoQuant transcript 23019493 23083688 . + . gene_id ENSG00000004487.15; transcript_id ENST00000400181.8; exons 21; 122.819101 chr1 IsoQuant gene 23303771 23344336 . - . gene_id ENSG00000125944.19; transcripts 2; gene_type protein_coding; gene_name HNRNPR; havana_gene OTTHUMG00000003224.5; NA chr1 IsoQuant transcript 23309786 23344322 . - . gene_id ENSG00000125944.19; transcript_id ENST00000374612.5; exons 11; 73.801937 chr1 IsoQuant transcript 23309788 23344262 . - . gene_id ENSG00000125944.19; transcript_id ENST00000302271.10; exons 11; 4.980499 chr1 IsoQuant gene 23359448 23369804 . - . gene_id ENSG00000125945.14; transcripts 3; gene_type protein_coding; gene_name ZNF436; havana_gene OTTHUMG00000003232.2; NA chr1 IsoQuant transcript 23359449 23369804 . - . gene_id ENSG00000125945.14; transcript_id transcript1826.chr1.nnic; exons 3; 3.015466 chr1 IsoQuant transcript 23359448 23369442 . - . gene_id ENSG00000125945.14; transcript_id ENST00000314011.8; exons 4; 3.921011 chr1 IsoQuant transcript 23359975 23368386 . - . gene_id ENSG00000125945.14; transcript_id ENST00000374608.3; exons 3; 6.637647 chr1 IsoQuant gene 23368997 23371839 . + . gene_id ENSG00000249087.6; transcripts 1; gene_type antisense_RNA; gene_name ZNF436-AS1; tag ncRNA_host; havana_gene OTTHUMG00000003225.2; NA chr1 IsoQuant transcript 23369191 23371784 . + . gene_id ENSG00000249087.6; transcript_id transcript1829.chr1.nic; exons 3; 1.81109 chr1 IsoQuant gene 23381061 23424779 . - . gene_id ENSG00000204219.9; transcripts 3; gene_type protein_coding; gene_name TCEA3; havana_gene OTTHUMG00000003233.3; NA chr1 IsoQuant transcript 23381950 23424779 . - . gene_id ENSG00000204219.9; transcript_id transcript1841.chr1.nic; exons 11; 10.866543 chr1 IsoQuant transcript 23381061 23424740 . - . gene_id ENSG00000204219.9; transcript_id ENST00000450454.6; exons 11; 189.258955 chr1 IsoQuant gene 23428563 23484568 . - . gene_id ENSG00000088280.18; transcripts 4; gene_type protein_coding; gene_name ASAP3; havana_gene OTTHUMG00000003234.7; NA chr1 IsoQuant transcript 23428564 23484219 . - . gene_id ENSG00000088280.18; transcript_id transcript1852.chr1.nic; exons 25; 6.583314 chr1 IsoQuant transcript 23428564 23484244 . - . gene_id ENSG00000088280.18; transcript_id transcript1862.chr1.nic; exons 25; 6.728201 chr1 IsoQuant transcript 23428563 23484178 . - . gene_id ENSG00000088280.18; transcript_id ENST00000336689.7; exons 25; 81.888456 chr1 IsoQuant transcript 23428563 23436677 . - . gene_id ENSG00000088280.18; transcript_id ENST00000495646.5; exons 10; 4.917111 chr1 IsoQuant gene 23557918 23559794 . - . gene_id ENSG00000117318.8; transcripts 2; gene_type protein_coding; gene_name ID3; havana_gene OTTHUMG00000003229.2; NA chr1 IsoQuant transcript 23557918 23559794 . - . gene_id ENSG00000117318.8; transcript_id ENST00000374561.5; exons 3; 183.825683 chr1 IsoQuant transcript 23557934 23559075 . - . gene_id ENSG00000117318.8; transcript_id ENST00000463312.1; exons 2; 3.622181 chr1 IsoQuant gene 23691779 23696425 . + . gene_id ENSG00000142676.12; transcripts 1; gene_type protein_coding; gene_name RPL11; havana_gene OTTHUMG00000002926.2; NA chr1 IsoQuant transcript 23691779 23696425 . + . gene_id ENSG00000142676.12; transcript_id ENST00000374550.7; exons 6; 550.571505 chr1 IsoQuant gene 23743155 23762059 . + . gene_id ENSG00000011007.12; transcripts 2; gene_type protein_coding; gene_name ELOA; havana_gene OTTHUMG00000002957.3; NA chr1 IsoQuant transcript 23743155 23762059 . + . gene_id ENSG00000011007.12; transcript_id ENST00000418390.6; exons 11; 57.502123 chr1 IsoQuant transcript 23743472 23759893 . + . gene_id ENSG00000011007.12; transcript_id ENST00000609199.1; exons 11; 9.508225 chr1 IsoQuant gene 23778352 23788232 . + . gene_id ENSG00000057757.9; transcripts 2; gene_type protein_coding; gene_name PITHD1; havana_gene OTTHUMG00000002960.3; NA chr1 IsoQuant transcript 23778352 23788230 . + . gene_id ENSG00000057757.9; transcript_id transcript1887.chr1.nnic; exons 5; 11.319315 chr1 IsoQuant transcript 23778405 23788232 . + . gene_id ENSG00000057757.9; transcript_id ENST00000246151.8; exons 6; 80.140754 chr1 IsoQuant gene 23790970 23795544 . + . gene_id ENSG00000011009.10; transcripts 1; gene_type protein_coding; gene_name LYPLA2; havana_gene OTTHUMG00000002961.4; NA chr1 IsoQuant transcript 23791181 23795544 . + . gene_id ENSG00000011009.10; transcript_id transcript1889.chr1.nnic; exons 10; 5.886044 chr1 IsoQuant gene 23795598 23800804 . - . gene_id ENSG00000117308.14; transcripts 3; gene_type protein_coding; gene_name GALE; havana_gene OTTHUMG00000002958.8; NA chr1 IsoQuant transcript 23795598 23800583 . - . gene_id ENSG00000117308.14; transcript_id transcript1896.chr1.nic; exons 12; 2.870578 chr1 IsoQuant transcript 23795599 23800804 . - . gene_id ENSG00000117308.14; transcript_id ENST00000617979.4; exons 12; 23.698119 chr1 IsoQuant transcript 23795598 23800753 . - . gene_id ENSG00000117308.14; transcript_id transcript1900.chr1.nic; exons 11; 2.417806 chr1 IsoQuant gene 23801885 23838620 . - . gene_id ENSG00000117305.14; transcripts 3; gene_type protein_coding; gene_name HMGCL; havana_gene OTTHUMG00000002963.4; NA chr1 IsoQuant transcript 23801885 23825459 . - . gene_id ENSG00000117305.14; transcript_id ENST00000374490.7; exons 9; 213.101961 chr1 IsoQuant transcript 23801887 23825428 . - . gene_id ENSG00000117305.14; transcript_id ENST00000436439.6; exons 7; 3.921011 chr1 IsoQuant gene 23845077 23868294 . - . gene_id ENSG00000179163.11; transcripts 1; gene_type protein_coding; gene_name FUCA1; havana_gene OTTHUMG00000002965.2; NA chr1 IsoQuant transcript 23845077 23868294 . - . gene_id ENSG00000179163.11; transcript_id ENST00000374479.3; exons 8; 215.519767 chr1 IsoQuant gene 23959109 23963462 . + . gene_id ENSG00000189266.11; transcripts 1; gene_type protein_coding; gene_name PNRC2; havana_gene OTTHUMG00000013891.4; NA chr1 IsoQuant transcript 23959812 23963462 . + . gene_id ENSG00000189266.11; transcript_id ENST00000334351.7; exons 3; 161.187052 chr1 IsoQuant gene 23964804 23980927 . - . gene_id ENSG00000188529.14; transcripts 3; gene_type protein_coding; gene_name SRSF10; havana_gene OTTHUMG00000013893.4; NA chr1 IsoQuant transcript 23966449 23980362 . - . gene_id ENSG00000188529.14; transcript_id transcript1919.chr1.nic; exons 7; 3.622181 chr1 IsoQuant transcript 23967823 23980367 . - . gene_id ENSG00000188529.14; transcript_id transcript1923.chr1.nic; exons 7; 4.527726 chr1 IsoQuant transcript 23966445 23980296 . - . gene_id ENSG00000188529.14; transcript_id ENST00000453840.7; exons 6; 3.622181 chr1 IsoQuant gene 24154155 24187959 . - . gene_id ENSG00000185436.11; transcripts 2; gene_type protein_coding; gene_name IFNLR1; havana_gene OTTHUMG00000003036.2; NA chr1 IsoQuant transcript 24154155 24187270 . - . gene_id ENSG00000185436.11; transcript_id transcript1937.chr1.nnic; exons 6; 1.81109 chr1 IsoQuant transcript 24154157 24187261 . - . gene_id ENSG00000185436.11; transcript_id ENST00000327535.5; exons 7; 3.622181 chr1 IsoQuant gene 24356999 24416934 . - . gene_id ENSG00000001460.17; transcripts 2; gene_type protein_coding; gene_name STPG1; havana_gene OTTHUMG00000003297.2; NA chr1 IsoQuant transcript 24357000 24413731 . - . gene_id ENSG00000001460.17; transcript_id transcript1938.chr1.nnic; exons 10; 4.980499 chr1 IsoQuant transcript 24357000 24413772 . - . gene_id ENSG00000001460.17; transcript_id ENST00000337248.8; exons 9; 13.130406 chr1 IsoQuant gene 24415794 24472982 . + . gene_id ENSG00000001461.16; transcripts 3; gene_type protein_coding; gene_name NIPAL3; havana_gene OTTHUMG00000003299.3; NA chr1 IsoQuant transcript 24415796 24472982 . + . gene_id ENSG00000001461.16; transcript_id transcript1946.chr1.nnic; exons 11; 6.338817 chr1 IsoQuant transcript 24415814 24466310 . + . gene_id ENSG00000001461.16; transcript_id ENST00000339255.2; exons 12; 3.622181 chr1 IsoQuant gene 24502351 24541040 . + . gene_id ENSG00000117602.11; transcripts 1; gene_type protein_coding; gene_name RCAN3; havana_gene OTTHUMG00000003298.7; NA chr1 IsoQuant transcript 24502865 24537014 . + . gene_id ENSG00000117602.11; transcript_id transcript1948.chr1.nic; exons 5; 1.81109 chr1 IsoQuant gene 24631716 24673280 . + . gene_id ENSG00000133226.16; transcripts 3; gene_type protein_coding; gene_name SRRM1; havana_gene OTTHUMG00000003320.4; NA chr1 IsoQuant transcript 24643273 24673280 . + . gene_id ENSG00000133226.16; transcript_id transcript1949.chr1.nic; exons 19; 8.90151 chr1 IsoQuant transcript 24643273 24673280 . + . gene_id ENSG00000133226.16; transcript_id transcript1954.chr1.nic; exons 18; 28.823505 chr1 IsoQuant transcript 24643301 24673280 . + . gene_id ENSG00000133226.16; transcript_id transcript1957.chr1.nic; exons 17; 4.826556 chr1 IsoQuant gene 24745357 24844324 . + . gene_id ENSG00000169504.14; transcripts 1; gene_type protein_coding; gene_name CLIC4; havana_gene OTTHUMG00000003327.4; NA chr1 IsoQuant transcript 24745357 24844324 . + . gene_id ENSG00000169504.14; transcript_id ENST00000374379.8; exons 6; 104.137702 chr1 IsoQuant gene 25222679 25232502 . - . gene_id ENSG00000117614.9; transcripts 1; gene_type protein_coding; gene_name SYF2; havana_gene OTTHUMG00000043610.1; NA chr1 IsoQuant transcript 25222679 25232493 . - . gene_id ENSG00000117614.9; transcript_id ENST00000236273.8; exons 7; 56.143805 chr1 IsoQuant gene 25242234 25338254 . - . gene_id ENSG00000117616.17; transcripts 10; gene_type protein_coding; gene_name RSRP1; tag overlapping_locus; havana_gene OTTHUMG00000043611.6; NA chr1 IsoQuant transcript 25242234 25247485 . - . gene_id ENSG00000117616.17; transcript_id transcript1973.chr1.nic; exons 6; 2.943022 chr1 IsoQuant transcript 25242237 25247519 . - . gene_id ENSG00000117616.17; transcript_id ENST00000243189.11; exons 5; 8.376293 chr1 IsoQuant transcript 25242234 25267915 . - . gene_id ENSG00000117616.17; transcript_id transcript1981.chr1.nic; exons 5; 3.848567 chr1 IsoQuant transcript 25242234 25338254 . - . gene_id ENSG00000117616.17; transcript_id transcript1982.chr1.nic; exons 5; 2.716636 chr1 IsoQuant transcript 25242234 25247485 . - . gene_id ENSG00000117616.17; transcript_id transcript1985.chr1.nic; exons 5; 7.244362 chr1 IsoQuant transcript 25242234 25267915 . - . gene_id ENSG00000117616.17; transcript_id transcript1988.chr1.nic; exons 4; 6.338817 chr1 IsoQuant transcript 25242234 25338254 . - . gene_id ENSG00000117616.17; transcript_id transcript1989.chr1.nic; exons 4; 6.338817 chr1 IsoQuant transcript 25242234 25247087 . - . gene_id ENSG00000117616.17; transcript_id transcript1991.chr1.nic; exons 3; 1.81109 chr1 IsoQuant transcript 25242249 25247454 . - . gene_id ENSG00000117616.17; transcript_id ENST00000498238.1; exons 4; 34.410719 chr1 IsoQuant transcript 25242255 25247457 . - . gene_id ENSG00000117616.17; transcript_id ENST00000568254.5; exons 5; 1.131932 chr1 IsoQuant gene 25337917 25362361 . + . gene_id ENSG00000183726.10; transcripts 1; gene_type protein_coding; gene_name TMEM50A; havana_gene OTTHUMG00000007651.1; NA chr1 IsoQuant transcript 25337917 25362361 . + . gene_id ENSG00000183726.10; transcript_id ENST00000374358.4; exons 7; 244.044442 chr1 IsoQuant gene 25543580 25568886 . + . gene_id ENSG00000157978.11; transcripts 1; gene_type protein_coding; gene_name LDLRAP1; havana_gene OTTHUMG00000007386.5; NA chr1 IsoQuant transcript 25543580 25568886 . + . gene_id ENSG00000157978.11; transcript_id ENST00000374338.4; exons 9; 112.28761 chr1 IsoQuant gene 25800176 25818224 . + . gene_id ENSG00000162430.16; transcripts 2; gene_type protein_coding; gene_name SELENON; tag overlapping_locus; havana_gene OTTHUMG00000007375.3; NA chr1 IsoQuant transcript 25800193 25818221 . + . gene_id ENSG00000162430.16; transcript_id ENST00000374315.1; exons 12; 24.449721 chr1 IsoQuant transcript 25800176 25818224 . + . gene_id ENSG00000162430.16; transcript_id ENST00000361547.6; exons 13; 11.772088 chr1 IsoQuant gene 25818640 25834000 . + . gene_id ENSG00000117640.17; transcripts 7; gene_type protein_coding; gene_name MTFR1L; tag overlapping_locus; havana_gene OTTHUMG00000007377.6; NA chr1 IsoQuant transcript 25820024 25834000 . + . gene_id ENSG00000117640.17; transcript_id transcript2064.chr1.nic; exons 7; 19.197559 chr1 IsoQuant transcript 25819908 25832941 . + . gene_id ENSG00000117640.17; transcript_id transcript2074.chr1.nic; exons 6; 18.228626 chr1 IsoQuant transcript 25819906 25832941 . + . gene_id ENSG00000117640.17; transcript_id ENST00000374303.6; exons 7; 144.796684 chr1 IsoQuant transcript 25819929 25832942 . + . gene_id ENSG00000117640.17; transcript_id ENST00000474295.5; exons 7; 59.04155 chr1 IsoQuant transcript 25820003 25832938 . + . gene_id ENSG00000117640.17; transcript_id ENST00000374307.9; exons 7; 10.142107 chr1 IsoQuant transcript 25820193 25832938 . + . gene_id ENSG00000117640.17; transcript_id ENST00000374301.7; exons 7; 10.775988 chr1 IsoQuant transcript 25820828 25832938 . + . gene_id ENSG00000117640.17; transcript_id ENST00000374300.7; exons 7; 13.492624 chr1 IsoQuant gene 25861210 25875932 . - . gene_id ENSG00000182749.5; transcripts 1; gene_type protein_coding; gene_name PAQR7; tag retrogene; havana_gene OTTHUMG00000007373.1; NA chr1 IsoQuant transcript 25861485 25875932 . - . gene_id ENSG00000182749.5; transcript_id transcript2086.chr1.nnic; exons 3; 12.677633 chr1 IsoQuant gene 25884181 25906991 . - . gene_id ENSG00000117632.22; transcripts 1; gene_type protein_coding; gene_name STMN1; tag ncRNA_host; havana_gene OTTHUMG00000007389.3; NA chr1 IsoQuant transcript 25900102 25906466 . - . gene_id ENSG00000117632.22; transcript_id ENST00000455785.6; exons 5; 20.82754 chr1 IsoQuant gene 25959763 25998157 . - . gene_id ENSG00000158006.13; transcripts 2; gene_type protein_coding; gene_name PAFAH2; havana_gene OTTHUMG00000007437.3; NA chr1 IsoQuant transcript 25959763 25998087 . - . gene_id ENSG00000158006.13; transcript_id transcript2089.chr1.nic; exons 12; 8.60268 chr1 IsoQuant transcript 25959767 25998157 . - . gene_id ENSG00000158006.13; transcript_id ENST00000374282.7; exons 11; 25.808039 chr1 IsoQuant gene 26111165 26125543 . + . gene_id ENSG00000175087.9; transcripts 2; gene_type protein_coding; gene_name PDIK1L; havana_gene OTTHUMG00000007511.2; NA chr1 IsoQuant transcript 26111165 26125530 . + . gene_id ENSG00000175087.9; transcript_id ENST00000619836.4; exons 3; 3.169408 chr1 IsoQuant transcript 26111837 26125543 . + . gene_id ENSG00000175087.9; transcript_id ENST00000374271.8; exons 4; 1.358318 chr1 IsoQuant gene 26159020 26163962 . + . gene_id ENSG00000197245.5; transcripts 1; gene_type protein_coding; gene_name FAM110D; havana_gene OTTHUMG00000007537.2; NA chr1 IsoQuant transcript 26159020 26163962 . + . gene_id ENSG00000197245.5; transcript_id ENST00000374268.4; exons 2; 10.866543 chr1 IsoQuant gene 26169871 26170873 . + . gene_id ENSG00000142684.8; transcripts 1; gene_type protein_coding; gene_name ZNF593; havana_gene OTTHUMG00000007538.3; NA chr1 IsoQuant transcript 26169871 26170873 . + . gene_id ENSG00000142684.8; transcript_id ENST00000374266.6; exons 3; 26.260812 chr1 IsoQuant gene 26209741 26229840 . + . gene_id ENSG00000236155.6; transcripts 1; gene_type transcribed_unprocessed_pseudogene; gene_name AL355877.1; havana_gene OTTHUMG00000003384.3; NA chr1 IsoQuant transcript 26225320 26229840 . + . gene_id ENSG00000236155.6; transcript_id ENST00000451482.1; exons 4; 1.81109 chr1 IsoQuant gene 26234153 26279038 . + . gene_id ENSG00000130695.14; transcripts 2; gene_type protein_coding; gene_name CEP85; havana_gene OTTHUMG00000003380.5; NA chr1 IsoQuant transcript 26234168 26278808 . + . gene_id ENSG00000130695.14; transcript_id transcript2108.chr1.nic; exons 14; 1.81109 chr1 IsoQuant transcript 26234202 26278808 . + . gene_id ENSG00000130695.14; transcript_id ENST00000252992.8; exons 14; 1.81109 chr1 IsoQuant gene 26279176 26281522 . + . gene_id ENSG00000142669.14; transcripts 1; gene_type protein_coding; gene_name SH3BGRL3; havana_gene OTTHUMG00000003381.2; NA chr1 IsoQuant transcript 26279176 26281522 . + . gene_id ENSG00000142669.14; transcript_id ENST00000270792.9; exons 3; 223.669674 chr1 IsoQuant gene 26281328 26318363 . - . gene_id ENSG00000158062.20; transcripts 6; gene_type protein_coding; gene_name UBXN11; havana_gene OTTHUMG00000003382.13; NA chr1 IsoQuant transcript 26282271 26306736 . - . gene_id ENSG00000158062.20; transcript_id transcript2124.chr1.nic; exons 13; 5.134442 chr1 IsoQuant transcript 26282271 26306793 . - . gene_id ENSG00000158062.20; transcript_id transcript2130.chr1.nic; exons 11; 9.055452 chr1 IsoQuant transcript 26282281 26306640 . - . gene_id ENSG00000158062.20; transcript_id ENST00000472155.5; exons 14; 7.244362 chr1 IsoQuant transcript 26282282 26306636 . - . gene_id ENSG00000158062.20; transcript_id ENST00000475591.5; exons 13; 6.338817 chr1 IsoQuant transcript 26282284 26306645 . - . gene_id ENSG00000158062.20; transcript_id ENST00000374221.7; exons 16; 1.512261 chr1 IsoQuant transcript 26282282 26306620 . - . gene_id ENSG00000158062.20; transcript_id ENST00000374223.5; exons 12; 1.512261 chr1 IsoQuant gene 26317957 26320523 . + . gene_id ENSG00000169442.8; transcripts 1; gene_type protein_coding; gene_name CD52; havana_gene OTTHUMG00000003491.2; NA chr1 IsoQuant transcript 26317957 26320523 . + . gene_id ENSG00000169442.8; transcript_id ENST00000374213.2; exons 2; 6.338817 chr1 IsoQuant gene 26432282 26471330 . + . gene_id ENSG00000117682.16; transcripts 4; gene_type protein_coding; gene_name DHDDS; havana_gene OTTHUMG00000003554.7; NA chr1 IsoQuant transcript 26432366 26471330 . + . gene_id ENSG00000117682.16; transcript_id transcript2136.chr1.nic; exons 9; 6.11243 chr1 IsoQuant transcript 26432295 26471330 . + . gene_id ENSG00000117682.16; transcript_id transcript2142.chr1.nnic; exons 7; 2.490249 chr1 IsoQuant transcript 26432282 26471294 . + . gene_id ENSG00000117682.16; transcript_id ENST00000434391.6; exons 9; 4.30134 chr1 IsoQuant transcript 26432355 26471294 . + . gene_id ENSG00000117682.16; transcript_id ENST00000360009.6; exons 9; 3.395795 chr1 IsoQuant gene 26472450 26475972 . + . gene_id ENSG00000198830.10; transcripts 1; gene_type protein_coding; gene_name HMGN2; havana_gene OTTHUMG00000003555.3; NA chr1 IsoQuant transcript 26472519 26475972 . + . gene_id ENSG00000198830.10; transcript_id ENST00000361427.5; exons 6; 223.669674 chr1 IsoQuant gene 26529761 26575030 . + . gene_id ENSG00000117676.13; transcripts 2; gene_type protein_coding; gene_name RPS6KA1; tag ncRNA_host; havana_gene OTTHUMG00000004003.5; NA chr1 IsoQuant transcript 26529767 26575025 . + . gene_id ENSG00000117676.13; transcript_id ENST00000374168.6; exons 22; 76.518573 chr1 IsoQuant transcript 26543112 26575014 . + . gene_id ENSG00000117676.13; transcript_id ENST00000530003.5; exons 21; 4.074954 chr1 IsoQuant gene 26693236 26782104 . + . gene_id ENSG00000117713.18; transcripts 1; gene_type protein_coding; gene_name ARID1A; havana_gene OTTHUMG00000004004.11; NA chr1 IsoQuant transcript 26696033 26782104 . + . gene_id ENSG00000117713.18; transcript_id ENST00000324856.11; exons 20; 15.394269 chr1 IsoQuant gene 26787313 26798401 . + . gene_id ENSG00000060642.10; transcripts 3; gene_type protein_coding; gene_name PIGV; havana_gene OTTHUMG00000004005.5; NA chr1 IsoQuant transcript 26787313 26798401 . + . gene_id ENSG00000060642.10; transcript_id transcript2164.chr1.nic; exons 4; 51.317249 chr1 IsoQuant transcript 26788185 26798401 . + . gene_id ENSG00000060642.10; transcript_id transcript2168.chr1.nic; exons 4; 12.378803 chr1 IsoQuant transcript 26787995 26798398 . + . gene_id ENSG00000060642.10; transcript_id ENST00000078527.8; exons 4; 31.395253 chr1 IsoQuant gene 26826680 26857602 . + . gene_id ENSG00000204160.11; transcripts 1; gene_type protein_coding; gene_name ZDHHC18; havana_gene OTTHUMG00000004092.5; NA chr1 IsoQuant transcript 26826680 26857601 . + . gene_id ENSG00000204160.11; transcript_id transcript2173.chr1.nnic; exons 9; 3.622181 chr1 IsoQuant gene 26876133 26890297 . - . gene_id ENSG00000142751.14; transcripts 1; gene_type protein_coding; gene_name GPN2; havana_gene OTTHUMG00000004227.4; NA chr1 IsoQuant transcript 26876133 26890297 . - . gene_id ENSG00000142751.14; transcript_id ENST00000374135.8; exons 5; 38.938445 chr1 IsoQuant gene 26890488 26900466 . - . gene_id ENSG00000198746.12; transcripts 1; gene_type protein_coding; gene_name GPATCH3; havana_gene OTTHUMG00000004229.3; NA chr1 IsoQuant transcript 26890489 26900466 . - . gene_id ENSG00000198746.12; transcript_id ENST00000361720.9; exons 7; 30.788538 chr1 IsoQuant gene 26911489 26913966 . - . gene_id ENSG00000131910.4; transcripts 1; gene_type protein_coding; gene_name NR0B2; havana_gene OTTHUMG00000004231.1; NA chr1 IsoQuant transcript 26911489 26913966 . - . gene_id ENSG00000131910.4; transcript_id ENST00000254227.3; exons 2; 43.466171 chr1 IsoQuant gene 26900238 26946862 . + . gene_id ENSG00000090273.13; transcripts 1; gene_type protein_coding; gene_name NUDC; havana_gene OTTHUMG00000004226.11; NA chr1 IsoQuant transcript 26921726 26946862 . + . gene_id ENSG00000090273.13; transcript_id ENST00000321265.9; exons 9; 469.072434 chr1 IsoQuant gene 26949557 26960516 . - . gene_id ENSG00000175707.8; transcripts 2; gene_type protein_coding; gene_name KDF1; havana_gene OTTHUMG00000004272.1; NA chr1 IsoQuant transcript 26949557 26960516 . - . gene_id ENSG00000175707.8; transcript_id transcript2201.chr1.nnic; exons 4; 7.697135 chr1 IsoQuant transcript 26949562 26960406 . - . gene_id ENSG00000175707.8; transcript_id ENST00000320567.5; exons 4; 4.074954 chr1 IsoQuant gene 26993692 27000898 . + . gene_id ENSG00000253368.3; transcripts 1; gene_type protein_coding; gene_name TRNP1; havana_gene OTTHUMG00000004277.4; NA chr1 IsoQuant transcript 26993692 27000653 . + . gene_id ENSG00000253368.3; transcript_id transcript2202.chr1.nnic; exons 3; 7.244362 chr1 IsoQuant gene 27005020 27012836 . - . gene_id ENSG00000158246.7; transcripts 1; gene_type protein_coding; gene_name FAM46B; havana_gene OTTHUMG00000004278.3; NA chr1 IsoQuant transcript 27005020 27012836 . - . gene_id ENSG00000158246.7; transcript_id ENST00000289166.5; exons 2; 1.81109 chr1 IsoQuant gene 27234516 27308633 . + . gene_id ENSG00000142784.15; transcripts 3; gene_type protein_coding; gene_name WDTC1; havana_gene OTTHUMG00000004273.6; NA chr1 IsoQuant transcript 27234689 27308242 . + . gene_id ENSG00000142784.15; transcript_id transcript2212.chr1.nnic; exons 18; 4.228896 chr1 IsoQuant transcript 27234516 27308633 . + . gene_id ENSG00000142784.15; transcript_id ENST00000319394.7; exons 16; 49.958931 chr1 IsoQuant transcript 27234668 27308244 . + . gene_id ENSG00000142784.15; transcript_id ENST00000361771.7; exons 16; 9.209395 chr1 IsoQuant gene 27322145 27336400 . + . gene_id ENSG00000186501.14; transcripts 2; gene_type protein_coding; gene_name TMEM222; tag ncRNA_host; havana_gene OTTHUMG00000004410.6; NA chr1 IsoQuant transcript 27322160 27336400 . + . gene_id ENSG00000186501.14; transcript_id ENST00000374076.8; exons 6; 71.990846 chr1 IsoQuant transcript 27322247 27336400 . + . gene_id ENSG00000186501.14; transcript_id ENST00000464720.5; exons 7; 6.791589 chr1 IsoQuant gene 27355184 27366959 . - . gene_id ENSG00000142733.14; transcripts 2; gene_type protein_coding; gene_name MAP3K6; havana_gene OTTHUMG00000004631.6; NA chr1 IsoQuant transcript 27355188 27366959 . - . gene_id ENSG00000142733.14; transcript_id transcript2228.chr1.nic; exons 27; 1.81109 chr1 IsoQuant transcript 27355186 27366858 . - . gene_id ENSG00000142733.14; transcript_id ENST00000374040.7; exons 28; 11.772088 chr1 IsoQuant gene 27369112 27374824 . - . gene_id ENSG00000142748.12; transcripts 2; gene_type protein_coding; gene_name FCN3; havana_gene OTTHUMG00000005722.2; NA chr1 IsoQuant transcript 27369112 27374824 . - . gene_id ENSG00000142748.12; transcript_id ENST00000270879.8; exons 8; 87.539058 chr1 IsoQuant transcript 27369112 27374824 . - . gene_id ENSG00000142748.12; transcript_id ENST00000354982.2; exons 7; 18.71762 chr1 IsoQuant gene 27404226 27490158 . - . gene_id ENSG00000158195.10; transcripts 1; gene_type protein_coding; gene_name WASF2; havana_gene OTTHUMG00000003393.3; NA chr1 IsoQuant transcript 27404226 27490158 . - . gene_id ENSG00000158195.10; transcript_id ENST00000618852.4; exons 9; 61.577076 chr1 IsoQuant gene 27612064 27635277 . - . gene_id ENSG00000000938.12; transcripts 1; gene_type protein_coding; gene_name FGR; havana_gene OTTHUMG00000003516.2; NA chr1 IsoQuant transcript 27612064 27635277 . - . gene_id ENSG00000000938.12; transcript_id ENST00000374005.7; exons 13; 8.149907 chr1 IsoQuant gene 27666061 27672218 . - . gene_id ENSG00000126709.14; transcripts 2; gene_type protein_coding; gene_name IFI6; havana_gene OTTHUMG00000003518.1; NA chr1 IsoQuant transcript 27666066 27672198 . - . gene_id ENSG00000126709.14; transcript_id ENST00000362020.4; exons 5; 24.449721 chr1 IsoQuant transcript 27666061 27672218 . - . gene_id ENSG00000126709.14; transcript_id ENST00000361157.10; exons 5; 76.971345 chr1 IsoQuant gene 27725979 27763122 . + . gene_id ENSG00000009780.15; transcripts 1; gene_type protein_coding; gene_name FAM76A; tag overlapping_locus; havana_gene OTTHUMG00000003729.4; NA chr1 IsoQuant transcript 27725979 27763122 . + . gene_id ENSG00000009780.15; transcript_id ENST00000373954.10; exons 9; 3.622181 chr1 IsoQuant gene 27773183 27824452 . + . gene_id ENSG00000117758.13; transcripts 1; gene_type protein_coding; gene_name STX12; tag overlapping_locus; havana_gene OTTHUMG00000003730.2; NA chr1 IsoQuant transcript 27773183 27824452 . + . gene_id ENSG00000117758.13; transcript_id ENST00000373943.8; exons 9; 131.30406 chr1 IsoQuant gene 27830778 27851676 . + . gene_id ENSG00000117751.17; transcripts 1; gene_type protein_coding; gene_name PPP1R8; tag ncRNA_host; havana_gene OTTHUMG00000003734.4; NA chr1 IsoQuant transcript 27830778 27851676 . + . gene_id ENSG00000117751.17; transcript_id ENST00000311772.9; exons 7; 1.81109 chr1 IsoQuant gene 27872543 27886685 . + . gene_id ENSG00000130775.15; transcripts 3; gene_type protein_coding; gene_name THEMIS2; havana_gene OTTHUMG00000003735.5; NA chr1 IsoQuant transcript 27872568 27886673 . + . gene_id ENSG00000130775.15; transcript_id ENST00000373921.7; exons 6; 32.599629 chr1 IsoQuant transcript 27872544 27886685 . + . gene_id ENSG00000130775.15; transcript_id ENST00000373925.5; exons 5; 2.716636 chr1 IsoQuant gene 27891524 27914746 . - . gene_id ENSG00000117748.9; transcripts 1; gene_type protein_coding; gene_name RPA2; havana_gene OTTHUMG00000003915.3; NA chr1 IsoQuant transcript 27891524 27914743 . - . gene_id ENSG00000117748.9; transcript_id ENST00000373912.7; exons 9; 47.088352 chr1 IsoQuant gene 27959462 27968096 . + . gene_id ENSG00000158156.7; transcripts 2; gene_type protein_coding; gene_name XKR8; havana_gene OTTHUMG00000003912.1; NA chr1 IsoQuant transcript 27959952 27968093 . + . gene_id ENSG00000158156.7; transcript_id transcript2278.chr1.nnic; exons 4; 2.263863 chr1 IsoQuant transcript 27959462 27968096 . + . gene_id ENSG00000158156.7; transcript_id ENST00000373884.5; exons 3; 28.524675 chr1 IsoQuant gene 27970344 28088696 . - . gene_id ENSG00000158161.15; transcripts 1; gene_type protein_coding; gene_name EYA3; tag ncRNA_host; havana_gene OTTHUMG00000003916.1; NA chr1 IsoQuant transcript 27970347 28088637 . - . gene_id ENSG00000158161.15; transcript_id ENST00000540618.5; exons 17; 8.149907 chr1 IsoQuant gene 28147166 28193936 . - . gene_id ENSG00000169403.11; transcripts 2; gene_type protein_coding; gene_name PTAFR; havana_gene OTTHUMG00000003953.1; NA chr1 IsoQuant transcript 28149352 28176690 . - . gene_id ENSG00000169403.11; transcript_id transcript2284.chr1.nnic; exons 3; 4.527726 chr1 IsoQuant transcript 28147166 28177188 . - . gene_id ENSG00000169403.11; transcript_id ENST00000373857.7; exons 2; 13.583179 chr1 IsoQuant gene 28199456 28233025 . - . gene_id ENSG00000126698.10; transcripts 2; gene_type protein_coding; gene_name DNAJC8; havana_gene OTTHUMG00000003538.3; NA chr1 IsoQuant transcript 28200278 28233025 . - . gene_id ENSG00000126698.10; transcript_id ENST00000263697.5; exons 9; 108.212656 chr1 IsoQuant transcript 28200559 28233025 . - . gene_id ENSG00000126698.10; transcript_id ENST00000489277.5; exons 10; 5.886044 chr1 IsoQuant gene 28236109 28246906 . + . gene_id ENSG00000130770.17; transcripts 3; gene_type protein_coding; gene_name ATPIF1; havana_gene OTTHUMG00000003533.2; NA chr1 IsoQuant transcript 28236133 28238100 . + . gene_id ENSG00000130770.17; transcript_id ENST00000335514.9; exons 3; 184.731229 chr1 IsoQuant transcript 28236154 28238098 . + . gene_id ENSG00000130770.17; transcript_id ENST00000465645.1; exons 2; 12.677633 chr1 IsoQuant transcript 28236109 28238105 . + . gene_id ENSG00000130770.17; transcript_id ENST00000497986.5; exons 3; 3.622181 chr1 IsoQuant gene 28259527 28282491 . + . gene_id ENSG00000130766.4; transcripts 1; gene_type protein_coding; gene_name SESN2; havana_gene OTTHUMG00000003532.1; NA chr1 IsoQuant transcript 28259527 28282491 . + . gene_id ENSG00000130766.4; transcript_id ENST00000253063.3; exons 10; 36.22181 chr1 IsoQuant gene 28329002 28335967 . + . gene_id ENSG00000130772.13; transcripts 3; gene_type protein_coding; gene_name MED18; havana_gene OTTHUMG00000003537.2; NA chr1 IsoQuant transcript 28329009 28335966 . + . gene_id ENSG00000130772.13; transcript_id transcript2299.chr1.nnic; exons 4; 3.622181 chr1 IsoQuant transcript 28329038 28335967 . + . gene_id ENSG00000130772.13; transcript_id ENST00000373842.8; exons 3; 11.772088 chr1 IsoQuant gene 28369582 28500369 . + . gene_id ENSG00000204138.12; transcripts 1; gene_type protein_coding; gene_name PHACTR4; tag ncRNA_host; havana_gene OTTHUMG00000003541.7; NA chr1 IsoQuant transcript 28369603 28500369 . + . gene_id ENSG00000204138.12; transcript_id ENST00000373839.7; exons 14; 7.244362 chr1 IsoQuant gene 28505943 28539300 . + . gene_id ENSG00000180198.15; transcripts 4; gene_type protein_coding; gene_name RCC1; tag ncRNA_host; havana_gene OTTHUMG00000003645.11; NA chr1 IsoQuant transcript 28506044 28538986 . + . gene_id ENSG00000180198.15; transcript_id transcript2311.chr1.nnic; exons 15; 3.395795 chr1 IsoQuant transcript 28506043 28538986 . + . gene_id ENSG00000180198.15; transcript_id transcript2316.chr1.nic; exons 13; 4.30134 chr1 IsoQuant transcript 28506043 28538986 . + . gene_id ENSG00000180198.15; transcript_id transcript2317.chr1.nic; exons 13; 3.395795 chr1 IsoQuant transcript 28505943 28539196 . + . gene_id ENSG00000180198.15; transcript_id ENST00000398958.6; exons 12; 1.584704 chr1 IsoQuant gene 28505980 28510892 . + . gene_id ENSG00000242125.3; transcripts 1; gene_type sense_intronic; gene_name SNHG3; tag ncRNA_host; havana_gene OTTHUMG00000003657.2; NA chr1 IsoQuant transcript 28505980 28510892 . + . gene_id ENSG00000242125.3; transcript_id ENST00000413987.1; exons 3; 22.638631 chr1 IsoQuant gene 28553085 28578545 . + . gene_id ENSG00000180098.9; transcripts 1; gene_type protein_coding; gene_name TRNAU1AP; havana_gene OTTHUMG00000003653.2; NA chr1 IsoQuant transcript 28553085 28578545 . + . gene_id ENSG00000180098.9; transcript_id ENST00000373830.4; exons 9; 9.055452 chr1 IsoQuant gene 28578538 28582983 . - . gene_id ENSG00000197989.13; transcripts 4; gene_type antisense_RNA; gene_name SNHG12; tag ncRNA_host; havana_gene OTTHUMG00000003654.2; NA chr1 IsoQuant transcript 28578547 28581872 . - . gene_id ENSG00000197989.13; transcript_id transcript2332.chr1.nic; exons 6; 1.81109 chr1 IsoQuant transcript 28578547 28581872 . - . gene_id ENSG00000197989.13; transcript_id transcript2333.chr1.nic; exons 5; 3.622181 chr1 IsoQuant transcript 28578538 28581834 . - . gene_id ENSG00000197989.13; transcript_id ENST00000531126.5; exons 6; 1.81109 chr1 IsoQuant transcript 28578538 28581872 . - . gene_id ENSG00000197989.13; transcript_id ENST00000470977.5; exons 5; 3.622181 chr1 IsoQuant gene 28736621 28769782 . + . gene_id ENSG00000198492.15; transcripts 4; gene_type protein_coding; gene_name YTHDF2; havana_gene OTTHUMG00000003648.5; NA chr1 IsoQuant transcript 28736935 28769775 . + . gene_id ENSG00000198492.15; transcript_id transcript2348.chr1.nnic; exons 4; 6.338817 chr1 IsoQuant transcript 28737746 28769782 . + . gene_id ENSG00000198492.15; transcript_id transcript2349.chr1.nic; exons 4; 6.039987 chr1 IsoQuant transcript 28736759 28769775 . + . gene_id ENSG00000198492.15; transcript_id ENST00000373812.7; exons 5; 159.077132 chr1 IsoQuant transcript 28736950 28769125 . + . gene_id ENSG00000198492.15; transcript_id ENST00000478283.5; exons 4; 1.204375 chr1 IsoQuant gene 28887076 29120046 . + . gene_id ENSG00000159023.19; transcripts 1; gene_type protein_coding; gene_name EPB41; tag ncRNA_host; havana_gene OTTHUMG00000003644.5; NA chr1 IsoQuant transcript 28887076 29120033 . + . gene_id ENSG00000159023.19; transcript_id transcript2354.chr1.nic; exons 18; 5.433271 chr1 IsoQuant gene 29119428 29123935 . - . gene_id ENSG00000253304.1; transcripts 1; gene_type protein_coding; gene_name TMEM200B; havana_gene OTTHUMG00000003658.3; NA chr1 IsoQuant transcript 29119428 29123935 . - . gene_id ENSG00000253304.1; transcript_id ENST00000521452.1; exons 2; 19.921995 chr1 IsoQuant gene 29147740 29181987 . - . gene_id ENSG00000116350.16; transcripts 2; gene_type protein_coding; gene_name SRSF4; tag ncRNA_host; havana_gene OTTHUMG00000003663.6; NA chr1 IsoQuant transcript 29147740 29181945 . - . gene_id ENSG00000116350.16; transcript_id transcript2365.chr1.nic; exons 9; 5.433271 chr1 IsoQuant transcript 29147743 29181987 . - . gene_id ENSG00000116350.16; transcript_id ENST00000373795.6; exons 6; 167.525869 chr1 IsoQuant gene 29192873 29230958 . - . gene_id ENSG00000116353.15; transcripts 6; gene_type protein_coding; gene_name MECR; havana_gene OTTHUMG00000059082.4; NA chr1 IsoQuant transcript 29192885 29230950 . - . gene_id ENSG00000116353.15; transcript_id transcript2377.chr1.nic; exons 12; 1.81109 chr1 IsoQuant transcript 29192882 29230930 . - . gene_id ENSG00000116353.15; transcript_id transcript2378.chr1.nic; exons 12; 1.81109 chr1 IsoQuant transcript 29193819 29230958 . - . gene_id ENSG00000116353.15; transcript_id transcript2380.chr1.nic; exons 11; 3.622181 chr1 IsoQuant transcript 29192887 29230950 . - . gene_id ENSG00000116353.15; transcript_id transcript2381.chr1.nic; exons 11; 8.149907 chr1 IsoQuant transcript 29193822 29230958 . - . gene_id ENSG00000116353.15; transcript_id transcript2387.chr1.nic; exons 9; 1.81109 chr1 IsoQuant transcript 29193817 29230932 . - . gene_id ENSG00000116353.15; transcript_id ENST00000263702.10; exons 10; 40.749536 chr1 IsoQuant gene 29236516 29326813 . + . gene_id ENSG00000060656.19; transcripts 5; gene_type protein_coding; gene_name PTPRU; havana_gene OTTHUMG00000003699.7; NA chr1 IsoQuant transcript 29260136 29326799 . + . gene_id ENSG00000060656.19; transcript_id transcript2390.chr1.nic; exons 25; 6.338817 chr1 IsoQuant transcript 29260136 29326799 . + . gene_id ENSG00000060656.19; transcript_id transcript2391.chr1.nnic; exons 22; 2.716636 chr1 IsoQuant transcript 29280971 29326799 . + . gene_id ENSG00000060656.19; transcript_id transcript2392.chr1.nnic; exons 20; 4.527726 chr1 IsoQuant transcript 29283420 29326799 . + . gene_id ENSG00000060656.19; transcript_id transcript2393.chr1.nic; exons 18; 4.527726 chr1 IsoQuant transcript 29236549 29326813 . + . gene_id ENSG00000060656.19; transcript_id ENST00000428026.6; exons 30; 1.81109 chr1 IsoQuant gene 30732469 30757820 . - . gene_id ENSG00000162511.7; transcripts 1; gene_type protein_coding; gene_name LAPTM5; tag ncRNA_host; havana_gene OTTHUMG00000003707.1; NA chr1 IsoQuant transcript 30732469 30757820 . - . gene_id ENSG00000162511.7; transcript_id ENST00000294507.3; exons 8; 178.392412 chr1 IsoQuant gene 30931505 31065991 . - . gene_id ENSG00000134644.15; transcripts 7; gene_type protein_coding; gene_name PUM1; havana_gene OTTHUMG00000003795.5; NA chr1 IsoQuant transcript 30931505 31065723 . - . gene_id ENSG00000134644.15; transcript_id transcript2410.chr1.nnic; exons 23; 2.716636 chr1 IsoQuant transcript 30931505 31065723 . - . gene_id ENSG00000134644.15; transcript_id transcript2420.chr1.nnic; exons 22; 3.323351 chr1 IsoQuant transcript 30931505 31065723 . - . gene_id ENSG00000134644.15; transcript_id transcript2423.chr1.nic; exons 22; 8.448737 chr1 IsoQuant transcript 30931506 31065704 . - . gene_id ENSG00000134644.15; transcript_id ENST00000373747.7; exons 22; 11.772088 chr1 IsoQuant transcript 30931506 31065698 . - . gene_id ENSG00000134644.15; transcript_id ENST00000257075.9; exons 22; 16.598644 chr1 IsoQuant transcript 30932826 31065695 . - . gene_id ENSG00000134644.15; transcript_id ENST00000426105.6; exons 22; 3.015466 chr1 IsoQuant gene 31179165 31240086 . - . gene_id ENSG00000084628.9; transcripts 1; gene_type protein_coding; gene_name NKAIN1; havana_gene OTTHUMG00000003788.4; NA chr1 IsoQuant transcript 31179165 31240086 . - . gene_id ENSG00000084628.9; transcript_id transcript2436.chr1.nic; exons 6; 4.527726 chr1 IsoQuant gene 31259568 31296782 . - . gene_id ENSG00000060688.12; transcripts 1; gene_type protein_coding; gene_name SNRNP40; tag overlapping_locus; havana_gene OTTHUMG00000003790.2; NA chr1 IsoQuant transcript 31259568 31296770 . - . gene_id ENSG00000060688.12; transcript_id ENST00000263694.8; exons 10; 51.616079 chr1 IsoQuant gene 31296982 31364953 . + . gene_id ENSG00000121766.15; transcripts 3; gene_type protein_coding; gene_name ZCCHC17; havana_gene OTTHUMG00000003791.2; NA chr1 IsoQuant transcript 31296982 31364953 . + . gene_id ENSG00000121766.15; transcript_id ENST00000618216.4; exons 7; 1.512261 chr1 IsoQuant transcript 31296995 31364936 . + . gene_id ENSG00000121766.15; transcript_id ENST00000344147.9; exons 8; 35.017434 chr1 IsoQuant transcript 31296982 31364953 . + . gene_id ENSG00000121766.15; transcript_id ENST00000616393.4; exons 7; 1.512261 chr1 IsoQuant gene 31359106 31376850 . - . gene_id ENSG00000121769.7; transcripts 3; gene_type protein_coding; gene_name FABP3; havana_gene OTTHUMG00000003797.4; NA chr1 IsoQuant transcript 31359106 31373127 . - . gene_id ENSG00000121769.7; transcript_id transcript2450.chr1.nnic; exons 4; 4.826556 chr1 IsoQuant transcript 31365463 31373076 . - . gene_id ENSG00000121769.7; transcript_id transcript2451.chr1.nnic; exons 4; 3.015466 chr1 IsoQuant transcript 31365625 31373076 . - . gene_id ENSG00000121769.7; transcript_id ENST00000373713.6; exons 4; 21.12637 chr1 IsoQuant gene 31409565 31434680 . + . gene_id ENSG00000168528.11; transcripts 1; gene_type protein_coding; gene_name SERINC2; havana_gene OTTHUMG00000003796.2; NA chr1 IsoQuant transcript 31413116 31434678 . + . gene_id ENSG00000168528.11; transcript_id ENST00000373709.7; exons 10; 28.977448 chr1 IsoQuant gene 31576485 31587692 . + . gene_id ENSG00000142910.15; transcripts 3; gene_type protein_coding; gene_name TINAGL1; havana_gene OTTHUMG00000003884.1; NA chr1 IsoQuant transcript 31576515 31587692 . + . gene_id ENSG00000142910.15; transcript_id transcript2465.chr1.nic; exons 11; 10.966153 chr1 IsoQuant transcript 31576535 31587686 . + . gene_id ENSG00000142910.15; transcript_id ENST00000271064.11; exons 12; 280.854856 chr1 IsoQuant transcript 31578145 31587682 . + . gene_id ENSG00000142910.15; transcript_id ENST00000537531.2; exons 11; 3.758013 chr1 IsoQuant gene 31629862 31644899 . - . gene_id ENSG00000162517.12; transcripts 2; gene_type protein_coding; gene_name PEF1; havana_gene OTTHUMG00000003877.2; NA chr1 IsoQuant transcript 31629867 31644899 . - . gene_id ENSG00000162517.12; transcript_id transcript2481.chr1.nnic; exons 6; 5.433271 chr1 IsoQuant transcript 31629862 31644887 . - . gene_id ENSG00000162517.12; transcript_id ENST00000373703.4; exons 5; 136.737331 chr1 IsoQuant gene 31652247 31704319 . - . gene_id ENSG00000084636.17; transcripts 5; gene_type protein_coding; gene_name COL16A1; havana_gene OTTHUMG00000003883.22; NA chr1 IsoQuant transcript 31652247 31704319 . - . gene_id ENSG00000084636.17; transcript_id ENST00000373672.7; exons 71; 20.736986 chr1 IsoQuant transcript 31652522 31704079 . - . gene_id ENSG00000084636.17; transcript_id transcript2498.chr1.nic; exons 70; 13.492624 chr1 IsoQuant transcript 31652522 31704015 . - . gene_id ENSG00000084636.17; transcript_id transcript2500.chr1.nic; exons 70; 2.173309 chr1 IsoQuant transcript 31652522 31704016 . - . gene_id ENSG00000084636.17; transcript_id transcript2502.chr1.nic; exons 69; 3.078854 chr1 IsoQuant transcript 31652249 31670431 . - . gene_id ENSG00000084636.17; transcript_id transcript2508.chr1.nic; exons 23; 2.173309 chr1 IsoQuant gene 31727117 31764893 . - . gene_id ENSG00000121753.12; transcripts 1; gene_type protein_coding; gene_name ADGRB2; tag ncRNA_host; havana_gene OTTHUMG00000003885.6; NA chr1 IsoQuant transcript 31727118 31761010 . - . gene_id ENSG00000121753.12; transcript_id transcript2510.chr1.nnic; exons 30; 2.716636 chr1 IsoQuant gene 31906420 31944856 . - . gene_id ENSG00000184007.18; transcripts 5; gene_type protein_coding; gene_name PTP4A2; tag overlapping_locus; havana_gene OTTHUMG00000003801.11; NA chr1 IsoQuant transcript 31906420 31938441 . - . gene_id ENSG00000184007.18; transcript_id transcript2513.chr1.nnic; exons 7; 65.760695 chr1 IsoQuant transcript 31906420 31938390 . - . gene_id ENSG00000184007.18; transcript_id transcript2519.chr1.nnic; exons 6; 12.722911 chr1 IsoQuant transcript 31906421 31938441 . - . gene_id ENSG00000184007.18; transcript_id transcript2520.chr1.nic; exons 6; 54.894152 chr1 IsoQuant transcript 31906421 31938390 . - . gene_id ENSG00000184007.18; transcript_id transcript2524.chr1.nic; exons 5; 12.722911 chr1 IsoQuant transcript 31906421 31919483 . - . gene_id ENSG00000184007.18; transcript_id ENST00000602725.5; exons 5; 8.140852 chr1 IsoQuant gene 32013829 32060850 . + . gene_id ENSG00000121774.17; transcripts 1; gene_type protein_coding; gene_name KHDRBS1; havana_gene OTTHUMG00000003921.9; NA chr1 IsoQuant transcript 32013829 32043882 . + . gene_id ENSG00000121774.17; transcript_id ENST00000327300.11; exons 9; 172.959141 chr1 IsoQuant gene 32072031 32102866 . + . gene_id ENSG00000121775.17; transcripts 2; gene_type protein_coding; gene_name TMEM39B; tag ncRNA_host; havana_gene OTTHUMG00000004020.9; NA chr1 IsoQuant transcript 32072902 32102861 . + . gene_id ENSG00000121775.17; transcript_id ENST00000336294.9; exons 9; 4.074954 chr1 IsoQuant transcript 32072943 32102866 . + . gene_id ENSG00000121775.17; transcript_id ENST00000441402.5; exons 7; 2.263863 chr1 IsoQuant gene 32108038 32176568 . + . gene_id ENSG00000025800.13; transcripts 1; gene_type protein_coding; gene_name KPNA6; tag overlapping_locus; havana_gene OTTHUMG00000004333.5; NA chr1 IsoQuant transcript 32108038 32176568 . + . gene_id ENSG00000025800.13; transcript_id ENST00000373625.7; exons 14; 57.954895 chr1 IsoQuant gene 32179686 32198285 . + . gene_id ENSG00000084652.15; transcripts 2; gene_type protein_coding; gene_name TXLNA; havana_gene OTTHUMG00000004423.6; NA chr1 IsoQuant transcript 32179686 32198285 . + . gene_id ENSG00000084652.15; transcript_id ENST00000373610.7; exons 11; 87.385116 chr1 IsoQuant transcript 32180065 32198285 . + . gene_id ENSG00000084652.15; transcript_id ENST00000373609.1; exons 10; 82.857389 chr1 IsoQuant gene 32200386 32205387 . + . gene_id ENSG00000160050.14; transcripts 2; gene_type protein_coding; gene_name CCDC28B; havana_gene OTTHUMG00000005738.7; NA chr1 IsoQuant transcript 32200386 32205387 . + . gene_id ENSG00000160050.14; transcript_id ENST00000373602.9; exons 6; 19.921995 chr1 IsoQuant transcript 32200633 32205387 . + . gene_id ENSG00000160050.14; transcript_id ENST00000421922.6; exons 5; 1.81109 chr1 IsoQuant gene 32205661 32208687 . + . gene_id ENSG00000160051.11; transcripts 1; gene_type protein_coding; gene_name IQCC; havana_gene OTTHUMG00000005739.4; NA chr1 IsoQuant transcript 32205661 32208687 . + . gene_id ENSG00000160051.11; transcript_id ENST00000291358.10; exons 5; 2.716636 chr1 IsoQuant gene 32214472 32222359 . - . gene_id ENSG00000160055.19; transcripts 1; gene_type protein_coding; gene_name TMEM234; havana_gene OTTHUMG00000005742.6; NA chr1 IsoQuant transcript 32216197 32222325 . - . gene_id ENSG00000160055.19; transcript_id ENST00000309777.10; exons 5; 9.055452 chr1 IsoQuant gene 32221791 32231606 . + . gene_id ENSG00000084623.11; transcripts 2; gene_type protein_coding; gene_name EIF3I; havana_gene OTTHUMG00000007364.5; NA chr1 IsoQuant transcript 32221791 32231606 . + . gene_id ENSG00000084623.11; transcript_id transcript2543.chr1.nic; exons 12; 9.055452 chr1 IsoQuant transcript 32222370 32231604 . + . gene_id ENSG00000084623.11; transcript_id ENST00000373586.1; exons 11; 232.725126 chr1 IsoQuant gene 32247233 32248856 . + . gene_id ENSG00000183615.5; transcripts 1; gene_type protein_coding; gene_name FAM167B; havana_gene OTTHUMG00000007462.2; NA chr1 IsoQuant transcript 32247233 32248856 . + . gene_id ENSG00000183615.5; transcript_id ENST00000373582.3; exons 2; 17.20536 chr1 IsoQuant gene 32292086 32333635 . + . gene_id ENSG00000116478.11; transcripts 4; gene_type protein_coding; gene_name HDAC1; havana_gene OTTHUMG00000007529.5; NA chr1 IsoQuant transcript 32292104 32333634 . + . gene_id ENSG00000116478.11; transcript_id transcript2580.chr1.nic; exons 14; 3.377684 chr1 IsoQuant transcript 32292106 32333634 . + . gene_id ENSG00000116478.11; transcript_id transcript2584.chr1.nic; exons 12; 3.984399 chr1 IsoQuant transcript 32292089 32333634 . + . gene_id ENSG00000116478.11; transcript_id transcript2585.chr1.nic; exons 11; 3.984399 chr1 IsoQuant transcript 32292086 32333635 . + . gene_id ENSG00000116478.11; transcript_id ENST00000373548.7; exons 14; 84.876755 chr1 IsoQuant gene 32333832 32351999 . - . gene_id ENSG00000175130.6; transcripts 1; gene_type protein_coding; gene_name MARCKSL1; havana_gene OTTHUMG00000007589.3; NA chr1 IsoQuant transcript 32333833 32351999 . - . gene_id ENSG00000175130.6; transcript_id transcript2591.chr1.nnic; exons 3; 6.338817 chr1 IsoQuant gene 32363421 32394731 . - . gene_id ENSG00000160058.18; transcripts 2; gene_type protein_coding; gene_name BSDC1; havana_gene OTTHUMG00000007588.7; NA chr1 IsoQuant transcript 32363421 32394444 . - . gene_id ENSG00000160058.18; transcript_id transcript2598.chr1.nic; exons 11; 5.433271 chr1 IsoQuant transcript 32365103 32394448 . - . gene_id ENSG00000160058.18; transcript_id ENST00000455895.6; exons 11; 143.981693 chr1 IsoQuant gene 32600172 32650903 . - . gene_id ENSG00000176261.15; transcripts 4; gene_type protein_coding; gene_name ZBTB8OS; havana_gene OTTHUMG00000007856.9; NA chr1 IsoQuant transcript 32620820 32650584 . - . gene_id ENSG00000176261.15; transcript_id ENST00000468695.5; exons 7; 9.354282 chr1 IsoQuant transcript 32621830 32650525 . - . gene_id ENSG00000176261.15; transcript_id ENST00000373501.6; exons 7; 1.204375 chr1 IsoQuant transcript 32621830 32650560 . - . gene_id ENSG00000176261.15; transcript_id ENST00000436661.5; exons 6; 2.10992 chr1 IsoQuant gene 32651142 32686211 . + . gene_id ENSG00000162521.18; transcripts 2; gene_type protein_coding; gene_name RBBP4; havana_gene OTTHUMG00000007998.13; NA chr1 IsoQuant transcript 32651149 32680651 . + . gene_id ENSG00000162521.18; transcript_id transcript2626.chr1.nnic; exons 13; 6.338817 chr1 IsoQuant transcript 32651148 32686211 . + . gene_id ENSG00000162521.18; transcript_id ENST00000373493.9; exons 12; 143.076148 chr1 IsoQuant gene 32741885 32774970 . + . gene_id ENSG00000162522.10; transcripts 2; gene_type protein_coding; gene_name KIAA1522; havana_gene OTTHUMG00000008088.6; NA chr1 IsoQuant transcript 32741885 32774970 . + . gene_id ENSG00000162522.10; transcript_id ENST00000401073.6; exons 7; 76.0658 chr1 IsoQuant transcript 32754021 32774970 . + . gene_id ENSG00000162522.10; transcript_id ENST00000373481.7; exons 7; 77.876891 chr1 IsoQuant gene 32774776 32818153 . - . gene_id ENSG00000134684.10; transcripts 1; gene_type protein_coding; gene_name YARS; havana_gene OTTHUMG00000003933.2; NA chr1 IsoQuant transcript 32774776 32817272 . - . gene_id ENSG00000134684.10; transcript_id transcript2641.chr1.nnic; exons 13; 18.110905 chr1 IsoQuant gene 32816767 32858879 . + . gene_id ENSG00000116497.17; transcripts 1; gene_type protein_coding; gene_name S100PBP; havana_gene OTTHUMG00000003955.8; NA chr1 IsoQuant transcript 32817555 32858879 . + . gene_id ENSG00000116497.17; transcript_id ENST00000373475.9; exons 7; 28.071902 chr1 IsoQuant gene 32862268 32872482 . - . gene_id ENSG00000160097.16; transcripts 2; gene_type protein_coding; gene_name FNDC5; havana_gene OTTHUMG00000004015.3; NA chr1 IsoQuant transcript 32862268 32870949 . - . gene_id ENSG00000160097.16; transcript_id transcript2657.chr1.nnic; exons 7; 3.622181 chr1 IsoQuant transcript 32862269 32871146 . - . gene_id ENSG00000160097.16; transcript_id transcript2661.chr1.nic; exons 6; 32.599629 chr1 IsoQuant gene 32894594 32901438 . - . gene_id ENSG00000121900.18; transcripts 1; gene_type protein_coding; gene_name TMEM54; havana_gene OTTHUMG00000004016.3; NA chr1 IsoQuant transcript 32894595 32901358 . - . gene_id ENSG00000121900.18; transcript_id ENST00000373463.7; exons 6; 32.599629 chr1 IsoQuant gene 33007940 33080996 . - . gene_id ENSG00000004455.16; transcripts 3; gene_type protein_coding; gene_name AK2; tag ncRNA_host; havana_gene OTTHUMG00000004131.6; NA chr1 IsoQuant transcript 33009921 33036909 . - . gene_id ENSG00000004455.16; transcript_id transcript2673.chr1.nic; exons 7; 49.804988 chr1 IsoQuant transcript 33007984 33036870 . - . gene_id ENSG00000004455.16; transcript_id ENST00000373449.6; exons 7; 49.804988 chr1 IsoQuant transcript 33013044 33036877 . - . gene_id ENSG00000004455.16; transcript_id ENST00000480134.5; exons 5; 3.622181 chr1 IsoQuant gene 33081104 33120530 . + . gene_id ENSG00000142920.16; transcripts 3; gene_type protein_coding; gene_name AZIN2; havana_gene OTTHUMG00000004130.3; NA chr1 IsoQuant transcript 33081137 33120530 . + . gene_id ENSG00000142920.16; transcript_id transcript2678.chr1.nnic; exons 12; 1.81109 chr1 IsoQuant transcript 33081155 33120530 . + . gene_id ENSG00000142920.16; transcript_id transcript2682.chr1.nic; exons 10; 3.622181 chr1 IsoQuant transcript 33081167 33120529 . + . gene_id ENSG00000142920.16; transcript_id ENST00000373443.7; exons 11; 17.20536 chr1 IsoQuant gene 33256185 33300721 . + . gene_id ENSG00000160094.14; transcripts 1; gene_type protein_coding; gene_name ZNF362; tag overlapping_locus; havana_gene OTTHUMG00000004124.5; NA chr1 IsoQuant transcript 33256185 33300721 . + . gene_id ENSG00000160094.14; transcript_id transcript2690.chr1.nic; exons 8; 33.505174 chr1 IsoQuant gene 33323623 33431052 . - . gene_id ENSG00000134686.18; transcripts 3; gene_type protein_coding; gene_name PHC2; tag ncRNA_host; havana_gene OTTHUMG00000004133.1; NA chr1 IsoQuant transcript 33323624 33430986 . - . gene_id ENSG00000134686.18; transcript_id transcript2696.chr1.nnic; exons 15; 8.412515 chr1 IsoQuant transcript 33323624 33349946 . - . gene_id ENSG00000134686.18; transcript_id transcript2711.chr1.nic; exons 7; 92.329393 chr1 IsoQuant transcript 33323626 33349885 . - . gene_id ENSG00000134686.18; transcript_id ENST00000373418.7; exons 7; 145.149846 chr1 IsoQuant gene 33513999 34165842 . - . gene_id ENSG00000121904.17; transcripts 1; gene_type protein_coding; gene_name CSMD2; havana_gene OTTHUMG00000011135.10; NA chr1 IsoQuant transcript 33771536 34165228 . - . gene_id ENSG00000121904.17; transcript_id transcript2715.chr1.nic; exons 13; 1.81109 chr1 IsoQuant gene 34792998 34795747 . + . gene_id ENSG00000187513.8; transcripts 1; gene_type protein_coding; gene_name GJA4; havana_gene OTTHUMG00000004050.2; NA chr1 IsoQuant transcript 34792998 34795747 . + . gene_id ENSG00000187513.8; transcript_id ENST00000342280.4; exons 2; 27.166357 chr1 IsoQuant gene 34712737 34859816 . - . gene_id ENSG00000163866.8; transcripts 1; gene_type protein_coding; gene_name SMIM12; tag overlapping_locus; havana_gene OTTHUMG00000004375.3; NA chr1 IsoQuant transcript 34852669 34859816 . - . gene_id ENSG00000163866.8; transcript_id ENST00000521580.2; exons 2; 95.08225 chr1 IsoQuant gene 34865436 34929585 . - . gene_id ENSG00000116544.11; transcripts 1; gene_type protein_coding; gene_name DLGAP3; havana_gene OTTHUMG00000004049.1; NA chr1 IsoQuant transcript 34865437 34867594 . - . gene_id ENSG00000116544.11; transcript_id transcript2721.chr1.nic; exons 3; 2.716636 chr1 IsoQuant gene 34981533 35031741 . - . gene_id ENSG00000271741.1; transcripts 3; gene_type protein_coding; gene_name AC114490.2; tag overlapping_locus; havana_gene OTTHUMG00000185379.1; NA chr1 IsoQuant transcript 34987172 35031740 . - . gene_id ENSG00000271741.1; transcript_id transcript2725.chr1.nic; exons 16; 4.754113 chr1 IsoQuant transcript 34987172 35031689 . - . gene_id ENSG00000271741.1; transcript_id transcript2727.chr1.nic; exons 16; 2.037477 chr1 IsoQuant transcript 34981533 35031741 . - . gene_id ENSG00000271741.1; transcript_id ENST00000487874.1; exons 17; 1.81109 chr1 IsoQuant gene 34981535 34985353 . - . gene_id ENSG00000243749.1; transcripts 1; gene_type protein_coding; gene_name TMEM35B; tag overlapping_locus; havana_gene OTTHUMG00000004158.1; NA chr1 IsoQuant transcript 34981535 34985353 . - . gene_id ENSG00000243749.1; transcript_id ENST00000373337.3; exons 3; 63.388167 chr1 IsoQuant gene 34986165 35031968 . - . gene_id ENSG00000163867.16; transcripts 4; gene_type protein_coding; gene_name ZMYM6; tag overlapping_locus; havana_gene OTTHUMG00000004163.5; NA chr1 IsoQuant transcript 34986168 35031695 . - . gene_id ENSG00000163867.16; transcript_id transcript2723.chr1.nic; exons 17; 1.81109 chr1 IsoQuant transcript 34986982 35031740 . - . gene_id ENSG00000163867.16; transcript_id transcript2730.chr1.nic; exons 15; 2.037477 chr1 IsoQuant transcript 34986980 35031968 . - . gene_id ENSG00000163867.16; transcript_id ENST00000357182.8; exons 16; 3.848567 chr1 IsoQuant transcript 35017244 35031905 . - . gene_id ENSG00000163867.16; transcript_id ENST00000317538.9; exons 4; 2.716636 chr1 IsoQuant gene 35059786 35115859 . + . gene_id ENSG00000197056.9; transcripts 2; gene_type protein_coding; gene_name ZMYM1; havana_gene OTTHUMG00000004374.3; NA chr1 IsoQuant transcript 35079367 35115855 . + . gene_id ENSG00000197056.9; transcript_id ENST00000359858.8; exons 10; 2.716636 chr1 IsoQuant transcript 35079391 35115854 . + . gene_id ENSG00000197056.9; transcript_id ENST00000373329.5; exons 9; 1.81109 chr1 IsoQuant gene 35176378 35193148 . - . gene_id ENSG00000116560.10; transcripts 2; gene_type protein_coding; gene_name SFPQ; havana_gene OTTHUMG00000004157.7; NA chr1 IsoQuant transcript 35176378 35193146 . - . gene_id ENSG00000116560.10; transcript_id transcript2744.chr1.nic; exons 12; 40.749536 chr1 IsoQuant transcript 35182932 35193148 . - . gene_id ENSG00000116560.10; transcript_id ENST00000357214.5; exons 10; 244.497214 chr1 IsoQuant gene 35431414 35557950 . - . gene_id ENSG00000142687.17; transcripts 7; gene_type protein_coding; gene_name KIAA0319L; havana_gene OTTHUMG00000004370.6; NA chr1 IsoQuant transcript 35433492 35557397 . - . gene_id ENSG00000142687.17; transcript_id transcript2769.chr1.nic; exons 21; 2.825301 chr1 IsoQuant transcript 35433489 35557405 . - . gene_id ENSG00000142687.17; transcript_id transcript2771.chr1.nic; exons 21; 9.164118 chr1 IsoQuant transcript 35431414 35557416 . - . gene_id ENSG00000142687.17; transcript_id transcript2775.chr1.nic; exons 20; 10.069663 chr1 IsoQuant transcript 35433491 35557416 . - . gene_id ENSG00000142687.17; transcript_id transcript2776.chr1.nnic; exons 20; 2.825301 chr1 IsoQuant transcript 35433492 35557416 . - . gene_id ENSG00000142687.17; transcript_id transcript2781.chr1.nnic; exons 19; 2.825301 chr1 IsoQuant transcript 35433490 35557413 . - . gene_id ENSG00000142687.17; transcript_id ENST00000325722.7; exons 21; 84.324373 chr1 IsoQuant transcript 35434105 35454707 . - . gene_id ENSG00000142687.17; transcript_id ENST00000373266.8; exons 12; 1.014211 chr1 IsoQuant gene 35557473 35567274 . + . gene_id ENSG00000020129.15; transcripts 4; gene_type protein_coding; gene_name NCDN; havana_gene OTTHUMG00000059204.3; NA chr1 IsoQuant transcript 35557780 35566784 . + . gene_id ENSG00000020129.15; transcript_id transcript2790.chr1.nnic; exons 9; 5.886044 chr1 IsoQuant transcript 35557790 35566784 . + . gene_id ENSG00000020129.15; transcript_id transcript2792.chr1.nnic; exons 8; 8.30385 chr1 IsoQuant transcript 35557792 35566779 . + . gene_id ENSG00000020129.15; transcript_id ENST00000356090.8; exons 8; 62.636564 chr1 IsoQuant transcript 35557808 35566773 . + . gene_id ENSG00000020129.15; transcript_id ENST00000373243.6; exons 7; 16.453757 chr1 IsoQuant gene 35599544 35641844 . - . gene_id ENSG00000126067.11; transcripts 1; gene_type protein_coding; gene_name PSMB2; havana_gene OTTHUMG00000004169.2; NA chr1 IsoQuant transcript 35601584 35641844 . - . gene_id ENSG00000126067.11; transcript_id ENST00000373237.3; exons 6; 114.0987 chr1 IsoQuant gene 35713875 35719472 . - . gene_id ENSG00000142686.7; transcripts 1; gene_type protein_coding; gene_name C1orf216; havana_gene OTTHUMG00000004167.3; NA chr1 IsoQuant transcript 35713875 35719472 . - . gene_id ENSG00000142686.7; transcript_id ENST00000270815.4; exons 2; 60.671531 chr1 IsoQuant gene 35807642 35857890 . + . gene_id ENSG00000134698.10; transcripts 1; gene_type protein_coding; gene_name AGO4; havana_gene OTTHUMG00000004243.4; NA chr1 IsoQuant transcript 35807642 35857878 . + . gene_id ENSG00000134698.10; transcript_id transcript2808.chr1.nnic; exons 20; 2.716636 chr1 IsoQuant gene 35930718 36072500 . + . gene_id ENSG00000126070.19; transcripts 3; gene_type protein_coding; gene_name AGO3; havana_gene OTTHUMG00000184172.4; NA chr1 IsoQuant transcript 35931082 36056285 . + . gene_id ENSG00000126070.19; transcript_id transcript2818.chr1.nic; exons 20; 1.81109 chr1 IsoQuant transcript 35931078 36072500 . + . gene_id ENSG00000126070.19; transcript_id ENST00000373191.8; exons 19; 9.055452 chr1 IsoQuant transcript 35931082 35986373 . + . gene_id ENSG00000126070.19; transcript_id transcript2822.chr1.nic; exons 7; 1.81109 chr1 IsoQuant gene 36088875 36093932 . + . gene_id ENSG00000116863.10; transcripts 1; gene_type protein_coding; gene_name ADPRHL2; havana_gene OTTHUMG00000007628.2; NA chr1 IsoQuant transcript 36088875 36093932 . + . gene_id ENSG00000116863.10; transcript_id ENST00000373178.4; exons 6; 150.32051 chr1 IsoQuant gene 36095236 36125220 . - . gene_id ENSG00000171812.12; transcripts 1; gene_type protein_coding; gene_name COL8A2; havana_gene OTTHUMG00000007665.6; NA chr1 IsoQuant transcript 36095236 36125220 . - . gene_id ENSG00000171812.12; transcript_id ENST00000397799.1; exons 4; 11.772088 chr1 IsoQuant gene 36136570 36156053 . - . gene_id ENSG00000054116.11; transcripts 3; gene_type protein_coding; gene_name TRAPPC3; havana_gene OTTHUMG00000007664.3; NA chr1 IsoQuant transcript 36136570 36149514 . - . gene_id ENSG00000054116.11; transcript_id ENST00000616074.4; exons 3; 1.81109 chr1 IsoQuant transcript 36136572 36149469 . - . gene_id ENSG00000054116.11; transcript_id ENST00000373166.7; exons 5; 22.185858 chr1 IsoQuant transcript 36136570 36149514 . - . gene_id ENSG00000054116.11; transcript_id ENST00000616395.4; exons 5; 3.169408 chr1 IsoQuant gene 36155579 36180849 . + . gene_id ENSG00000116871.15; transcripts 7; gene_type protein_coding; gene_name MAP7D1; havana_gene OTTHUMG00000007714.6; NA chr1 IsoQuant transcript 36156181 36180849 . + . gene_id ENSG00000116871.15; transcript_id transcript2839.chr1.nic; exons 18; 3.830456