chr1 14407 29350 14407 29350 - transcript14.chr1.nnic@WASH7P transcript14.chr1.nnic unprocessed_pseudogene 29321,24738,18268,17915,17233,16858,14407 29350,24891,18366,18061,17742,17055,16765 Gene ID= ENSG00000227232.5 TPM= 3.62 Transcript Type= NA chr1 184876 199879 184876 199879 - transcript2.chr1.nnic@FO538757.1 transcript2.chr1.nnic unprocessed_pseudogene 199837,195263,189436,188791,188439,188130,187755,187376,187129,186317,185491,184876 199879,195416,189662,188892,188584,188266,187890,187577,187287,186469,185559,185350 Gene ID= ENSG00000279457.4 TPM= 1.81 Transcript Type= NA chr1 184876 199879 184876 199879 - transcript6.chr1.nnic@FO538757.1 transcript6.chr1.nnic unprocessed_pseudogene 199837,195263,188791,188439,187755,187376,187129,186317,185491,184876 199879,195416,188889,188584,188266,187577,187287,186469,185559,185350 Gene ID= ENSG00000279457.4 TPM= 9.06 Transcript Type= NA chr1 184876 199879 184876 199879 - transcript10.chr1.nnic@FO538757.1 transcript10.chr1.nnic unprocessed_pseudogene 199837,195263,188439,187755,187376,187129,186317,185491,184876 199879,195416,188584,188266,187577,187287,186469,185559,185350 Gene ID= ENSG00000279457.4 TPM= 1.81 Transcript Type= NA chr1 817371 819837 817371 819837 + ENST00000326734.2@FAM87B ENST00000326734.2 lincRNA 817371,818723 818202,819837 Gene ID= ENSG00000177757.2 TPM= 1.81 Transcript Type= lincRNA chr1 827581 857245 827581 857245 + transcript28.chr1.nnic@LINC01128 transcript28.chr1.nnic processed_transcript 827581,829003,847654,851927,852671,853391,853528 827775,829104,847806,852110,852766,853478,857245 Gene ID= ENSG00000228794.8 TPM= 5.28 Transcript Type= NA chr1 827774 857245 827774 857245 + transcript31.chr1.nnic@LINC01128 transcript31.chr1.nnic processed_transcript 827774,829003,847654,851927,852671,853391,853528 827853,829104,847806,852110,852766,853478,857245 Gene ID= ENSG00000228794.8 TPM= 2.56 Transcript Type= NA chr1 827639 857245 827639 857245 + transcript32.chr1.nnic@LINC01128 transcript32.chr1.nnic processed_transcript 827639,829003,851927,852671,853391,856449 827775,829104,852110,852766,855121,857245 Gene ID= ENSG00000228794.8 TPM= 7.54 Transcript Type= NA chr1 923923 944575 923923 944575 + transcript59.chr1.nic@SAMD11 transcript59.chr1.nic protein_coding 923923,925922,930155,931039,935772,939040,939275,941144,942136,942410,942559,943253,943698,943908 924948,926013,930336,931089,935896,939129,939412,941306,942251,942488,943058,943377,943808,944575 Gene ID= ENSG00000187634.11 TPM= 6.34 Transcript Type= NA chr1 924076 944575 924076 944575 + transcript65.chr1.nic@SAMD11 transcript65.chr1.nic protein_coding 924076,925922,930155,931039,935772,939040,939275,941144,942136,942410,943253,943698,943908 924948,926013,930336,931089,935896,939129,939412,941306,942251,943058,943377,943808,944575 Gene ID= ENSG00000187634.11 TPM= 1.81 Transcript Type= NA chr1 942113 944575 942113 944575 + transcript72.chr1.nic@SAMD11 transcript72.chr1.nic protein_coding 942113,942559,943253,943698,943908 942488,943058,943377,943808,944575 Gene ID= ENSG00000187634.11 TPM= 3.62 Transcript Type= NA chr1 944203 959297 944203 959297 - transcript38.chr1.nnic@NOC2L transcript38.chr1.nnic protein_coding 959215,958929,957099,956894,956095,955923,954464,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945057,944203 959297,959081,957273,957025,956215,956013,954523,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800 Gene ID= ENSG00000188976.10 TPM= 15.66 Transcript Type= NA chr1 944203 959297 944203 959297 - transcript41.chr1.nic@NOC2L transcript41.chr1.nic protein_coding 959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945057,944203 959297,959081,957273,957025,956215,956013,954523,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800 Gene ID= ENSG00000188976.10 TPM= 4.79 Transcript Type= NA chr1 944204 959297 944204 959297 - transcript45.chr1.nic@NOC2L transcript45.chr1.nic protein_coding 959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945042,944204 959297,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800 Gene ID= ENSG00000188976.10 TPM= 60.33 Transcript Type= NA chr1 944204 959290 944204 959290 - ENST00000327044.6@NOC2L ENST00000327044.6 protein_coding 959215,958929,957099,956894,956095,955923,954004,953782,953175,952412,952000,951127,948490,948131,946402,946173,945518,945057,944204 959290,959081,957273,957025,956215,956013,954082,953892,953288,952600,952139,951238,948603,948232,946545,946286,945653,945146,944800 Gene ID= ENSG00000188976.10 TPM= 180.47 Transcript Type= protein_coding chr1 960587 965715 960587 965715 + ENST00000338591.7@KLHL17 ENST00000338591.7 protein_coding 960587,961293,961629,961826,962355,962704,963109,963337,963920,964107,964349,964963 960800,961552,961750,962047,962471,962917,963253,963504,964008,964180,964530,965715 Gene ID= ENSG00000187961.13 TPM= 5.43 Transcript Type= protein_coding chr1 966482 975867 966482 975867 + transcript74.chr1.nic@PLEKHN1 transcript74.chr1.nic protein_coding 966482,966704,970277,970521,970686,970879,971077,971324,972075,972288,972861,973186,973500,973833,974316,974442 966614,966803,970423,970601,970758,971006,971208,971404,972150,972424,973010,973326,973640,974051,974364,975867 Gene ID= ENSG00000187583.10 TPM= 2.72 Transcript Type= NA chr1 998966 1000096 998966 1000096 - ENST00000481869.1@HES4 ENST00000481869.1 protein_coding 999526,998966 1000096,999432 Gene ID= ENSG00000188290.10 TPM= 7.24 Transcript Type= retained_intron chr1 998964 1000111 998964 1000111 - ENST00000304952.10@HES4 ENST00000304952.10 protein_coding 999866,999692,999526,998964 1000111,999787,999613,999432 Gene ID= ENSG00000188290.10 TPM= 7.24 Transcript Type= protein_coding chr1 1013423 1014540 1013423 1014540 + ENST00000379389.4@ISG15 ENST00000379389.4 protein_coding 1013423,1013984 1013576,1014540 Gene ID= ENSG00000187608.8 TPM= 15.39 Transcript Type= protein_coding chr1 1020123 1056116 1020123 1056116 + ENST00000379370.6@AGRN ENST00000379370.6 protein_coding 1020123,1022201,1035277,1040665,1041173,1041478,1041956,1043239,1043538,1043823,1044109,1044334,1045161,1045359,1045733,1045964,1046160,1046397,1046820,1047327,1047573,1047776,1048012,1048867,1049236,1049566,1049903,1050233,1050427,1050726,1051253,1051453,1051728,1053753,1054448,1054824 1020373,1022462,1035324,1040880,1041397,1041702,1042162,1043457,1043732,1044023,1044257,1044439,1045277,1045523,1045876,1046088,1046265,1046735,1046957,1047454,1047687,1047895,1048365,1049059,1049451,1049795,1050037,1050329,1050591,1050837,1051369,1051645,1051815,1053977,1054551,1056116 Gene ID= ENSG00000188157.14 TPM= 6.34 Transcript Type= protein_coding chr1 1081823 1116098 1081823 1116098 - ENST00000421241.6@C1orf159 ENST00000421241.6 protein_coding 1116060,1091991,1091472,1090353,1087502,1087139,1085878,1084481,1084353,1081823 1116098,1092103,1091565,1090428,1087597,1087204,1086012,1084506,1084383,1082987 Gene ID= ENSG00000131591.17 TPM= 7.7 Transcript Type= protein_coding chr1 1081823 1116095 1081823 1116095 - ENST00000379325.7@C1orf159 ENST00000379325.7 protein_coding 1116060,1091991,1091472,1090353,1087502,1087139,1085878,1084481,1084353,1083915,1081823 1116095,1092103,1091565,1090428,1087597,1087204,1086012,1084506,1084383,1084086,1082987 Gene ID= ENSG00000131591.17 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr1 1216908 1232061 1216908 1232061 - transcript113.chr1.nnic@SDF4 transcript113.chr1.nnic protein_coding 1231507,1228468,1223832,1223244,1218769,1218458,1216908 1232061,1228946,1223968,1223357,1218927,1218633,1217688 Gene ID= ENSG00000078808.16 TPM= 14.26 Transcript Type= NA chr1 1216908 1232001 1216908 1232001 - ENST00000360001.10@SDF4 ENST00000360001.10 protein_coding 1231892,1228468,1223832,1223244,1218769,1218458,1216908 1232001,1228946,1223968,1223357,1218927,1218633,1217688 Gene ID= ENSG00000078808.16 TPM= 295.89 Transcript Type= protein_coding chr1 1216931 1232031 1216931 1232031 - ENST00000263741.11@SDF4 ENST00000263741.11 protein_coding 1231892,1228468,1223832,1223244,1218769,1218458,1216931 1232031,1228946,1223968,1223357,1218927,1218633,1217804 Gene ID= ENSG00000078808.16 TPM= 17.21 Transcript Type= protein_coding chr1 1216932 1221351 1216932 1221351 - ENST00000494748.1@SDF4 ENST00000494748.1 protein_coding 1218769,1218458,1216932 1221351,1218633,1217688 Gene ID= ENSG00000078808.16 TPM= 3.4 Transcript Type= retained_intron chr1 1253908 1273833 1253908 1273833 - transcript131.chr1.nic@UBE2J2 transcript131.chr1.nic protein_coding 1272853,1267862,1263346,1257208,1256992,1256045,1253908 1273833,1267992,1263386,1257310,1257130,1256125,1255487 Gene ID= ENSG00000160087.20 TPM= 6.34 Transcript Type= NA chr1 1292360 1308015 1292360 1308015 - transcript165.chr1.nic@ACAP3 transcript165.chr1.nic protein_coding 1307769,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292360 1308015,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708 Gene ID= ENSG00000131584.18 TPM= 19.7 Transcript Type= NA chr1 1292376 1308018 1292376 1308018 - ENST00000354700.9@ACAP3 ENST00000354700.9 protein_coding 1307769,1304086,1303162,1302922,1301988,1300509,1300158,1299973,1299831,1299345,1298567,1298370,1298013,1297822,1296425,1296211,1296015,1295736,1295447,1294718,1294402,1294090,1293823,1292376 1308018,1304143,1303281,1302975,1302046,1300692,1300202,1300068,1299905,1299356,1298679,1298421,1298113,1297933,1296633,1296280,1296109,1295938,1295554,1294816,1294628,1294199,1293933,1293708 Gene ID= ENSG00000131584.18 TPM= 80.38 Transcript Type= protein_coding chr1 1308567 1311677 1308567 1311677 + ENST00000379031.9@PUSL1 ENST00000379031.9 protein_coding 1308567,1308915,1309086,1309454,1309681,1310634,1310909,1311330 1308720,1308972,1309273,1309603,1309851,1310688,1311071,1311677 Gene ID= ENSG00000169972.11 TPM= 18.11 Transcript Type= protein_coding chr1 1308022 1311676 1308022 1311676 + transcript196.chr1.nic@PUSL1 transcript196.chr1.nic protein_coding 1308022,1309086,1309454,1309681,1310634,1310909,1311330 1308972,1309273,1309603,1309851,1310688,1311071,1311676 Gene ID= ENSG00000169972.11 TPM= 3.62 Transcript Type= NA chr1 1311598 1324695 1311598 1324695 - transcript177.chr1.nic@INTS11 transcript177.chr1.nic protein_coding 1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311598 1324695,1321093,1320529,1319433,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924 Gene ID= ENSG00000127054.20 TPM= 9.06 Transcript Type= NA chr1 1311597 1324691 1311597 1324691 - ENST00000435064.5@INTS11 ENST00000435064.5 protein_coding 1324581,1320996,1320456,1319296,1315520,1315404,1314824,1314301,1313732,1313509,1313035,1312787,1312593,1312440,1312226,1312018,1311597 1324691,1321093,1320529,1319524,1315618,1315438,1314962,1314365,1313921,1313592,1313124,1312949,1312700,1312501,1312368,1312147,1311924 Gene ID= ENSG00000127054.20 TPM= 99.61 Transcript Type= protein_coding chr1 1324767 1328897 1324767 1328897 + ENST00000343938.8@CPTP ENST00000343938.8 protein_coding 1324767,1326836,1327241 1325102,1327032,1328897 Gene ID= ENSG00000224051.6 TPM= 78.78 Transcript Type= protein_coding chr1 1331314 1335306 1331314 1335306 + ENST00000339381.5@TAS1R3 ENST00000339381.5 protein_coding 1331314,1331638,1332024,1332921,1333259,1333506 1331536,1331938,1332806,1333124,1333379,1335306 Gene ID= ENSG00000169962.4 TPM= 1.81 Transcript Type= protein_coding chr1 1335275 1349425 1335275 1349425 - transcript210.chr1.nnic@DVL1 transcript210.chr1.nnic protein_coding 1349253,1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1335275 1349425,1349085,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515 Gene ID= ENSG00000107404.19 TPM= 7.72 Transcript Type= NA chr1 1335276 1349350 1335276 1349350 - ENST00000378888.9@DVL1 ENST00000378888.9 protein_coding 1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339287,1338522,1338269,1337977,1335276 1349350,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515 Gene ID= ENSG00000107404.19 TPM= 12.24 Transcript Type= protein_coding chr1 1335275 1349460 1335275 1349460 - transcript226.chr1.nic@DVL1 transcript226.chr1.nic protein_coding 1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339362,1338522,1338269,1337977,1335275 1349460,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1338653,1338436,1338183,1336515 Gene ID= ENSG00000107404.19 TPM= 7.72 Transcript Type= NA chr1 1335276 1349112 1335276 1349112 - ENST00000378891.9@DVL1 ENST00000378891.9 protein_coding 1348896,1342689,1342363,1342053,1341667,1340410,1340247,1340038,1339736,1339582,1339362,1338522,1338269,1337977,1335276 1349112,1342758,1342484,1342156,1341805,1340503,1340316,1340177,1339812,1339649,1339439,1338653,1338436,1338183,1336515 Gene ID= ENSG00000107404.19 TPM= 25.83 Transcript Type= protein_coding chr1 1352610 1357960 1352610 1357960 + transcript246.chr1.nnic@NA transcript246.chr1.nnic NA 1352610,1355263,1357214 1355076,1355740,1357960 Gene ID= novel_gene_chr1_247 TPM= 3.62 Transcript Type= NA chr1 1352689 1358794 1352689 1358794 - ENST00000342753.8@MXRA8 ENST00000342753.8 protein_coding 1358456,1356681,1355244,1354682,1354354,1354193,1354030,1353848,1352689 1358794,1356704,1355345,1355152,1354509,1354232,1354106,1353928,1353629 Gene ID= ENSG00000162576.16 TPM= 3.23 Transcript Type= protein_coding chr1 1352685 1358557 1352685 1358557 - transcript238.chr1.nic@MXRA8 transcript238.chr1.nic protein_coding 1358456,1356681,1355450,1355244,1354682,1354193,1354030,1353848,1352685 1358557,1356704,1355752,1355345,1355152,1354509,1354106,1353928,1353629 Gene ID= ENSG00000162576.16 TPM= 5.95 Transcript Type= NA chr1 1352691 1358535 1352691 1358535 - ENST00000309212.10@MXRA8 ENST00000309212.10 protein_coding 1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352691 1358535,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353928,1353629 Gene ID= ENSG00000162576.16 TPM= 87.45 Transcript Type= protein_coding chr1 1352692 1358543 1352692 1358543 - ENST00000445648.5@MXRA8 ENST00000445648.5 protein_coding 1358456,1356681,1355450,1355244,1354682,1354354,1354193,1354030,1353848,1352692 1358543,1356704,1355752,1355345,1355152,1354509,1354232,1354106,1353946,1353332 Gene ID= ENSG00000162576.16 TPM= 2.33 Transcript Type= protein_coding chr1 1373730 1375495 1373730 1375495 - ENST00000338338.9@AURKAIP1 ENST00000338338.9 protein_coding 1375154,1374705,1374000,1373730 1375495,1374790,1374445,1373902 Gene ID= ENSG00000175756.13 TPM= 130.4 Transcript Type= protein_coding chr1 1373737 1375173 1373737 1375173 - ENST00000378853.3@AURKAIP1 ENST00000378853.3 protein_coding 1374997,1374705,1374000,1373737 1375173,1374790,1374445,1373902 Gene ID= ENSG00000175756.13 TPM= 45.28 Transcript Type= protein_coding chr1 1373732 1375169 1373732 1375169 - ENST00000321751.9@AURKAIP1 ENST00000321751.9 protein_coding 1375075,1374705,1374000,1373732 1375169,1374790,1374445,1373902 Gene ID= ENSG00000175756.13 TPM= 11.77 Transcript Type= protein_coding chr1 1373730 1375157 1373730 1375157 - ENST00000338370.7@AURKAIP1 ENST00000338370.7 protein_coding 1374705,1374000,1373730 1375157,1374445,1373902 Gene ID= ENSG00000175756.13 TPM= 2.72 Transcript Type= protein_coding chr1 1385710 1399378 1385710 1399378 - transcript263.chr1.nic@CCNL2 transcript263.chr1.nic protein_coding 1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1388626,1388492,1387954,1387777,1385710 1399378,1398671,1398342,1395514,1393460,1392803,1390563,1390371,1388743,1388510,1388065,1387869,1387582 Gene ID= ENSG00000221978.11 TPM= 19.25 Transcript Type= NA chr1 1386503 1399378 1386503 1399378 - transcript276.chr1.nic@CCNL2 transcript276.chr1.nic protein_coding 1399019,1398597,1398233,1395394,1393396,1391297,1390766,1390459,1390230,1387954,1387777,1386503 1399378,1398671,1398342,1395514,1393460,1392803,1390865,1390563,1390371,1388065,1387869,1387582 Gene ID= ENSG00000221978.11 TPM= 9.56 Transcript Type= NA chr1 1386496 1399378 1386496 1399378 - transcript282.chr1.nic@CCNL2 transcript282.chr1.nic protein_coding 1399019,1398597,1398233,1395394,1393396,1392679,1390766,1390459,1390230,1387954,1387777,1386496 1399378,1398671,1398342,1395514,1393460,1392803,1391575,1390563,1390371,1388065,1387869,1387582 Gene ID= ENSG00000221978.11 TPM= 39.03 Transcript Type= NA chr1 1385710 1399378 1385710 1399378 - transcript291.chr1.nic@CCNL2 transcript291.chr1.nic protein_coding 1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1385710 1399378,1398671,1398342,1395514,1393460,1392803,1390563,1390371,1388065,1387869,1387582 Gene ID= ENSG00000221978.11 TPM= 177.61 Transcript Type= NA chr1 1386495 1399312 1386495 1399312 - ENST00000400809.7@CCNL2 ENST00000400809.7 protein_coding 1399019,1398597,1398233,1395394,1393396,1390766,1390459,1390230,1387954,1387777,1386495 1399312,1398671,1398342,1395514,1393460,1390865,1390563,1390371,1388065,1387869,1387582 Gene ID= ENSG00000221978.11 TPM= 9.25 Transcript Type= protein_coding chr1 1386708 1399311 1386708 1399311 - ENST00000481223.6@CCNL2 ENST00000481223.6 protein_coding 1399019,1398597,1398233,1395394,1393396,1392790,1390766,1390459,1390230,1387954,1387777,1386708 1399311,1398671,1398342,1395514,1393460,1392803,1391575,1390563,1390371,1388065,1387869,1387582 Gene ID= ENSG00000221978.11 TPM= 7.15 Transcript Type= nonsense_mediated_decay chr1 1392288 1399317 1392288 1399317 - ENST00000408918.8@CCNL2 ENST00000408918.8 protein_coding 1399019,1398597,1398233,1395394,1393396,1392288 1399317,1398671,1398342,1395514,1393460,1392803 Gene ID= ENSG00000221978.11 TPM= 17.3 Transcript Type= protein_coding chr1 1399530 1402026 1399530 1402026 + ENST00000418833.2@AL391244.1 ENST00000418833.2 processed_transcript 1399530,1400605 1400303,1402026 Gene ID= ENSG00000224870.6 TPM= 13.58 Transcript Type= retained_intron chr1 1399527 1402046 1399527 1402046 + ENST00000444362.2@AL391244.1 ENST00000444362.2 processed_transcript 1399527,1400158,1400605 1399685,1400303,1402046 Gene ID= ENSG00000224870.6 TPM= 32.6 Transcript Type= antisense_RNA chr1 1401908 1407313 1401908 1407313 - ENST00000344843.11@MRPL20 ENST00000344843.11 protein_coding 1407131,1406909,1405809,1401908 1407313,1407019,1405886,1402256 Gene ID= ENSG00000242485.5 TPM= 90.1 Transcript Type= protein_coding chr1 1401913 1407268 1401913 1407268 - ENST00000487659.1@MRPL20 ENST00000487659.1 protein_coding 1407131,1405809,1401913 1407268,1407019,1402256 Gene ID= ENSG00000242485.5 TPM= 2.26 Transcript Type= retained_intron chr1 1418422 1421444 1418422 1421444 - ENST00000537107.5@ANKRD65 ENST00000537107.5 protein_coding 1421133,1420797,1420052,1418422 1421444,1421005,1420592,1419549 Gene ID= ENSG00000235098.8 TPM= 5.43 Transcript Type= protein_coding chr1 1435671 1442882 1435671 1442882 + ENST00000476993.1@VWA1 ENST00000476993.1 protein_coding 1435671,1436927,1439081 1435821,1437484,1442882 Gene ID= ENSG00000179403.11 TPM= 162.09 Transcript Type= protein_coding chr1 1471759 1496205 1471759 1496205 + transcript321.chr1.nnic@ATAD3B transcript321.chr1.nnic protein_coding 1471759,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490257,1490563,1495485 1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1489826,1490424,1490671,1496205 Gene ID= ENSG00000160072.19 TPM= 2.49 Transcript Type= NA chr1 1471759 1496205 1471759 1496205 + transcript325.chr1.nnic@ATAD3B transcript325.chr1.nnic protein_coding 1471759,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1489692,1490563,1495485 1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496205 Gene ID= ENSG00000160072.19 TPM= 2.19 Transcript Type= NA chr1 1471759 1496205 1471759 1496205 + transcript326.chr1.nnic@ATAD3B transcript326.chr1.nnic protein_coding 1471759,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485 1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496205 Gene ID= ENSG00000160072.19 TPM= 14.26 Transcript Type= NA chr1 1471759 1496205 1471759 1496205 + transcript328.chr1.nnic@ATAD3B transcript328.chr1.nnic protein_coding 1471759,1477274,1477751,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490563,1495485 1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1490424,1490671,1496205 Gene ID= ENSG00000160072.19 TPM= 3.78 Transcript Type= NA chr1 1471759 1496205 1471759 1496205 + transcript331.chr1.nnic@ATAD3B transcript331.chr1.nnic protein_coding 1471759,1477274,1477751,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490563,1495485 1472089,1477350,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1490424,1490671,1496205 Gene ID= ENSG00000160072.19 TPM= 2.87 Transcript Type= NA chr1 1471769 1496202 1471769 1496202 + ENST00000308647.7@ATAD3B ENST00000308647.7 protein_coding 1471769,1477274,1478644,1479049,1480867,1482138,1482545,1485016,1485782,1486110,1486544,1487863,1489204,1490257,1490563,1495485 1472089,1477350,1478745,1479108,1480936,1482303,1482614,1485171,1485838,1486235,1486668,1487914,1489274,1490424,1490671,1496202 Gene ID= ENSG00000160072.19 TPM= 5.21 Transcript Type= protein_coding chr1 1512148 1534687 1512148 1534687 + transcript340.chr1.nnic@ATAD3A transcript340.chr1.nnic protein_coding 1512148,1512326,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926 1512239,1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534687 Gene ID= ENSG00000197785.13 TPM= 4.41 Transcript Type= NA chr1 1512118 1534687 1512118 1534687 + transcript345.chr1.nic@ATAD3A transcript345.chr1.nic protein_coding 1512118,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1533926 1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1529331,1534687 Gene ID= ENSG00000197785.13 TPM= 4.53 Transcript Type= NA chr1 1512151 1534685 1512151 1534685 + ENST00000378756.7@ATAD3A ENST00000378756.7 protein_coding 1512151,1516012,1517311,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926 1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685 Gene ID= ENSG00000197785.13 TPM= 85.91 Transcript Type= protein_coding chr1 1512175 1534685 1512175 1534685 + ENST00000378755.9@ATAD3A ENST00000378755.9 protein_coding 1512175,1516012,1517167,1517716,1518921,1520141,1520548,1522744,1523511,1523839,1524273,1525240,1526461,1527695,1529223,1533926 1512473,1516088,1517412,1517775,1518990,1520306,1520617,1522899,1523567,1523964,1524397,1525291,1526531,1527862,1529331,1534685 Gene ID= ENSG00000197785.13 TPM= 1.69 Transcript Type= protein_coding chr1 1541673 1574869 1541673 1574869 - ENST00000291386.3@SSU72 ENST00000291386.3 protein_coding 1574478,1564773,1544863,1543869,1541673 1574869,1564916,1545002,1543987,1542167 Gene ID= ENSG00000160075.11 TPM= 124.06 Transcript Type= protein_coding chr1 1597560 1602840 1597560 1602840 + transcript353.chr1.nnic@NA transcript353.chr1.nnic NA 1597560,1599399,1600441,1600657,1600953 1597751,1599616,1600582,1600706,1602840 Gene ID= novel_gene_chr1_354 TPM= 9.06 Transcript Type= NA chr1 1615415 1630605 1615415 1630605 + ENST00000520777.5@MIB2 ENST00000520777.5 protein_coding 1615415,1616508,1623389,1623774,1624795,1624991,1625286,1625558,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605 Gene ID= ENSG00000197530.12 TPM= 2.54 Transcript Type= protein_coding chr1 1615870 1630609 1615870 1630609 + transcript386.chr1.nnic@MIB2 transcript386.chr1.nnic protein_coding 1615870,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1616082,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630609 Gene ID= ENSG00000197530.12 TPM= 5.98 Transcript Type= NA chr1 1615843 1630609 1615843 1630609 + transcript390.chr1.nic@MIB2 transcript390.chr1.nic protein_coding 1615843,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1616100,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630609 Gene ID= ENSG00000197530.12 TPM= 11.41 Transcript Type= NA chr1 1616224 1630609 1616224 1630609 + transcript413.chr1.nic@MIB2 transcript413.chr1.nic protein_coding 1616224,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630609 Gene ID= ENSG00000197530.12 TPM= 5.98 Transcript Type= NA chr1 1615421 1630610 1615421 1630610 + ENST00000355826.9@MIB2 ENST00000355826.9 protein_coding 1615421,1616508,1623431,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630610 Gene ID= ENSG00000197530.12 TPM= 52.16 Transcript Type= protein_coding chr1 1615443 1630605 1615443 1630605 + ENST00000505820.6@MIB2 ENST00000505820.6 protein_coding 1615443,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1615633,1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630605 Gene ID= ENSG00000197530.12 TPM= 12.32 Transcript Type= protein_coding chr1 1615496 1630604 1615496 1630604 + ENST00000489635.5@MIB2 ENST00000489635.5 protein_coding 1615496,1616508,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1615633,1616614,1623482,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604 Gene ID= ENSG00000197530.12 TPM= 5.85 Transcript Type= nonsense_mediated_decay chr1 1616310 1630604 1616310 1630604 + ENST00000504599.5@MIB2 ENST00000504599.5 protein_coding 1616310,1623389,1623774,1624795,1624991,1625286,1625546,1626650,1626837,1627074,1627296,1627673,1628019,1628273,1628489,1629133,1629385,1629639,1630292 1616614,1623699,1623945,1624901,1625185,1625428,1625653,1626754,1626999,1627207,1627444,1627829,1628179,1628399,1628722,1629311,1629566,1629704,1630604 Gene ID= ENSG00000197530.12 TPM= 2.35 Transcript Type= protein_coding chr1 1632095 1634654 1632095 1634654 + ENST00000356026.9@MMP23B ENST00000356026.9 protein_coding 1632095,1632783,1632981,1633188,1633748,1633989,1634202,1634451 1632374,1632913,1633120,1633355,1633912,1634099,1634328,1634654 Gene ID= ENSG00000189409.13 TPM= 7.24 Transcript Type= protein_coding chr1 1635227 1659012 1635227 1659012 - ENST00000341832.10@CDK11B ENST00000341832.10 protein_coding 1658914,1657375,1655369,1652439,1649499,1645126,1642386,1641906,1641662,1641048,1640277,1638500,1637762,1637408,1637081,1636897,1636682,1636333,1635937,1635227 1659012,1657498,1655484,1652566,1649637,1645262,1642508,1642001,1641820,1641113,1640452,1638590,1637883,1637513,1637202,1637004,1636798,1636481,1636126,1635856 Gene ID= ENSG00000248333.8 TPM= 3.62 Transcript Type= protein_coding chr1 1661479 1692728 1661479 1692728 - ENST00000611123.1@SLC35E2B ENST00000611123.1 protein_coding 1692449,1676378,1676064,1675463,1671509,1670098,1669664,1668327,1661479 1692728,1676846,1676199,1675590,1671629,1670151,1669736,1668472,1666019 Gene ID= ENSG00000189339.11 TPM= 69.73 Transcript Type= protein_coding chr1 1727386 1746096 1727386 1746096 - transcript446.chr1.nnic@SLC35E2 transcript446.chr1.nnic protein_coding 1745724,1744251,1739236,1738922,1738321,1734690,1727386 1746096,1744668,1739704,1739057,1738448,1734835,1729680 Gene ID= ENSG00000215790.6 TPM= 4.53 Transcript Type= NA chr1 1751233 1780123 1751233 1780123 - transcript459.chr1.nic@NADK transcript459.chr1.nic protein_coding 1779905,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751233 1780123,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060 Gene ID= ENSG00000008130.15 TPM= 16.36 Transcript Type= NA chr1 1751232 1778470 1751232 1778470 - ENST00000341426.9@NADK ENST00000341426.9 protein_coding 1778289,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232 1778470,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060 Gene ID= ENSG00000008130.15 TPM= 344.17 Transcript Type= protein_coding chr1 1751232 1778790 1751232 1778790 - ENST00000341991.7@NADK ENST00000341991.7 protein_coding 1778746,1765228,1761952,1757181,1756503,1756258,1755374,1754544,1754284,1754051,1753567,1751232 1778790,1765446,1762035,1757310,1756608,1756343,1755476,1754698,1754383,1754208,1753649,1753060 Gene ID= ENSG00000008130.15 TPM= 5.5 Transcript Type= protein_coding chr1 1785286 1891056 1785286 1891056 - ENST00000378609.8@GNB1 ENST00000378609.8 protein_coding 1890820,1839190,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785286 1891056,1839238,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053 Gene ID= ENSG00000078369.17 TPM= 347.48 Transcript Type= protein_coding chr1 1785285 1891117 1785285 1891117 - ENST00000610897.4@GNB1 ENST00000610897.4 protein_coding 1890820,1825397,1817837,1815756,1806475,1804419,1793245,1790395,1789053,1787322,1785285 1891117,1825499,1817875,1815862,1806538,1804581,1793311,1790596,1789269,1787437,1787053 Gene ID= ENSG00000078369.17 TPM= 83.97 Transcript Type= protein_coding chr1 1785285 1891117 1785285 1891117 - ENST00000615252.4@GNB1 ENST00000615252.4 protein_coding 1890820,1839190,1825397,1806475,1804419,1793245,1790395,1789053,1787322,1785285 1891117,1839238,1825499,1806538,1804581,1793311,1790596,1789269,1787437,1787053 Gene ID= ENSG00000078369.17 TPM= 11.17 Transcript Type= protein_coding chr1 1917588 1919279 1917588 1919279 - transcript509.chr1.nic@TMEM52 transcript509.chr1.nic protein_coding 1919045,1918893,1918253,1917588 1919279,1918934,1918431,1918162 Gene ID= ENSG00000178821.12 TPM= 7.24 Transcript Type= NA chr1 1917588 1919331 1917588 1919331 - transcript511.chr1.nnic@TMEM52 transcript511.chr1.nnic protein_coding 1919182,1919045,1918253,1917588 1919331,1919088,1918431,1918162 Gene ID= ENSG00000178821.12 TPM= 2.72 Transcript Type= NA chr1 1917588 1919279 1917588 1919279 - transcript516.chr1.nic@TMEM52 transcript516.chr1.nic protein_coding 1919045,1918253,1917588 1919279,1918934,1918162 Gene ID= ENSG00000178821.12 TPM= 6.34 Transcript Type= NA chr1 1917588 1919279 1917588 1919279 - transcript517.chr1.nic@TMEM52 transcript517.chr1.nic protein_coding 1919182,1918253,1917588 1919279,1919088,1918162 Gene ID= ENSG00000178821.12 TPM= 2.72 Transcript Type= NA chr1 1917591 1919273 1917591 1919273 - ENST00000310991.7@TMEM52 ENST00000310991.7 protein_coding 1919182,1919045,1918893,1918253,1917591 1919273,1919088,1918934,1918431,1918162 Gene ID= ENSG00000178821.12 TPM= 23.54 Transcript Type= protein_coding chr1 1983675 1989178 1983675 1989178 - transcript522.chr1.nic@CFAP74 transcript522.chr1.nic protein_coding 1988889,1988512,1986937,1985339,1983675 1989178,1988655,1987035,1985490,1985112 Gene ID= ENSG00000142609.17 TPM= 3.62 Transcript Type= NA chr1 1983675 1989178 1983675 1989178 - transcript523.chr1.nnic@CFAP74 transcript523.chr1.nnic protein_coding 1988889,1988512,1986937,1985386,1983675 1989178,1988655,1987035,1985490,1985112 Gene ID= ENSG00000142609.17 TPM= 3.62 Transcript Type= NA chr1 1983675 1989178 1983675 1989178 - transcript525.chr1.nic@CFAP74 transcript525.chr1.nic protein_coding 1988889,1988512,1986937,1983675 1989178,1988655,1987035,1985490 Gene ID= ENSG00000142609.17 TPM= 7.24 Transcript Type= NA chr1 2050470 2185395 2050470 2185395 + ENST00000378567.7@PRKCZ ENST00000378567.7 protein_coding 2050470,2055441,2056484,2059541,2135262,2144210,2146027,2148872,2150790,2155995,2169518,2172055,2172301,2173897,2174754,2175224,2184583,2184922 2050701,2055562,2056573,2059591,2135347,2144341,2146108,2148924,2150978,2156092,2169604,2172190,2172388,2174016,2174833,2175313,2184698,2185395 Gene ID= ENSG00000067606.16 TPM= 47.09 Transcript Type= protein_coding chr1 2189553 2194772 2189553 2194772 - transcript542.chr1.nic@FAAP20 transcript542.chr1.nic protein_coding 2194688,2193998,2193639,2192845,2189553 2194772,2194133,2193910,2192975,2189781 Gene ID= ENSG00000162585.16 TPM= 9.06 Transcript Type= NA chr1 2184478 2194775 2184478 2194775 - ENST00000414253.5@FAAP20 ENST00000414253.5 protein_coding 2194688,2193998,2193639,2189713,2186838,2186004,2184478 2194775,2194133,2193910,2189781,2187206,2186249,2185513 Gene ID= ENSG00000162585.16 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr1 2189548 2194774 2189548 2194774 - ENST00000378546.8@FAAP20 ENST00000378546.8 protein_coding 2194688,2193998,2193639,2189548 2194774,2194133,2193910,2189781 Gene ID= ENSG00000162585.16 TPM= 47.54 Transcript Type= protein_coding chr1 2189548 2194750 2189548 2194750 - ENST00000378543.2@FAAP20 ENST00000378543.2 protein_coding 2194688,2193639,2189548 2194750,2193910,2189781 Gene ID= ENSG00000162585.16 TPM= 2.26 Transcript Type= protein_coding chr1 2385533 2391547 2385533 2391547 - transcript554.chr1.nic@MORN1 transcript554.chr1.nic protein_coding 2391458,2389925,2388239,2385533 2391547,2389996,2388337,2387529 Gene ID= ENSG00000116151.13 TPM= 1.81 Transcript Type= NA chr1 2391773 2405442 2391773 2405442 + transcript558.chr1.nnic@RER1 transcript558.chr1.nnic protein_coding 2391773,2393270,2395784,2397116,2399415,2400857,2402207,2403035 2391958,2393355,2395871,2397220,2399514,2400935,2402342,2405442 Gene ID= ENSG00000157916.19 TPM= 21.46 Transcript Type= NA chr1 2391788 2405442 2391788 2405442 + transcript560.chr1.nnic@RER1 transcript560.chr1.nnic protein_coding 2391788,2394647,2395784,2397116,2399415,2400857,2402207,2403035 2391958,2394728,2395871,2397220,2399514,2400935,2402342,2405442 Gene ID= ENSG00000157916.19 TPM= 20.56 Transcript Type= NA chr1 2391784 2405442 2391784 2405442 + transcript568.chr1.nnic@RER1 transcript568.chr1.nnic protein_coding 2391784,2395784,2397116,2399415,2400857,2402207,2403035 2392126,2395871,2397220,2399514,2400935,2402342,2405442 Gene ID= ENSG00000157916.19 TPM= 18.74 Transcript Type= NA chr1 2391833 2405444 2391833 2405444 + ENST00000605895.5@RER1 ENST00000605895.5 protein_coding 2391833,2395784,2397116,2399415,2400857,2402207,2403035 2391958,2395871,2397220,2399514,2400935,2402342,2405444 Gene ID= ENSG00000157916.19 TPM= 346.55 Transcript Type= protein_coding chr1 2391890 2403751 2391890 2403751 + ENST00000378512.5@RER1 ENST00000378512.5 protein_coding 2391890,2395784,2397116,2399415,2400857,2402097,2403035 2391958,2395871,2397220,2399514,2400935,2402342,2403751 Gene ID= ENSG00000157916.19 TPM= 12.68 Transcript Type= protein_coding chr1 2403964 2412530 2403964 2412530 - ENST00000288774.7@PEX10 ENST00000288774.7 protein_coding 2412391,2410371,2408452,2406720,2406484,2403964 2412530,2410451,2408858,2406955,2406619,2405834 Gene ID= ENSG00000157911.9 TPM= 11.88 Transcript Type= protein_coding chr1 2404819 2412571 2404819 2412571 - ENST00000447513.6@PEX10 ENST00000447513.6 protein_coding 2412391,2410371,2408452,2406720,2406484,2404819 2412571,2410451,2408858,2406895,2406619,2405834 Gene ID= ENSG00000157911.9 TPM= 100.52 Transcript Type= protein_coding chr1 2508535 2526630 2508535 2526630 - transcript581.chr1.nic@PANK4 transcript581.chr1.nic protein_coding 2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508535 2526630,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510748,2510157,2509930,2509060 Gene ID= ENSG00000157881.13 TPM= 7.7 Transcript Type= NA chr1 2508533 2526628 2508533 2526628 - ENST00000378466.7@PANK4 ENST00000378466.7 protein_coding 2526464,2521718,2521101,2520723,2520322,2519801,2519143,2518516,2518164,2515562,2514354,2514002,2512888,2511628,2511338,2510678,2510057,2509862,2508533 2526628,2521800,2521315,2520906,2520414,2519954,2519324,2518597,2518264,2515717,2514466,2514089,2513039,2511683,2511387,2510782,2510157,2509930,2509060 Gene ID= ENSG00000157881.13 TPM= 46.64 Transcript Type= protein_coding chr1 2555754 2563863 2555754 2563863 + transcript590.chr1.nic@TNFRSF14 transcript590.chr1.nic protein_coding 2555754,2556585,2557726,2558343,2559823,2560624,2561673,2562865,2563148 2555850,2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563863 Gene ID= ENSG00000157873.17 TPM= 18.99 Transcript Type= NA chr1 2555790 2563863 2555790 2563863 + transcript593.chr1.nic@TNFRSF14 transcript593.chr1.nic protein_coding 2555790,2556585,2557726,2558343,2559823,2560624,2561673,2562865,2563148 2556252,2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563863 Gene ID= ENSG00000157873.17 TPM= 4.5 Transcript Type= NA chr1 2555760 2563863 2555760 2563863 + transcript596.chr1.nic@TNFRSF14 transcript596.chr1.nic protein_coding 2555760,2557726,2558343,2558881,2560624,2561494,2562865,2563148 2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563863 Gene ID= ENSG00000157873.17 TPM= 4.53 Transcript Type= NA chr1 2555760 2563863 2555760 2563863 + transcript597.chr1.nic@TNFRSF14 transcript597.chr1.nic protein_coding 2555760,2557726,2558343,2558881,2560624,2561673,2562865,2563148 2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563863 Gene ID= ENSG00000157873.17 TPM= 5.13 Transcript Type= NA chr1 2555760 2563863 2555760 2563863 + transcript600.chr1.nic@TNFRSF14 transcript600.chr1.nic protein_coding 2555760,2557726,2558343,2559823,2560624,2561494,2562865,2563148 2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563863 Gene ID= ENSG00000157873.17 TPM= 8.15 Transcript Type= NA chr1 2555760 2563863 2555760 2563863 + transcript607.chr1.nic@TNFRSF14 transcript607.chr1.nic protein_coding 2555760,2557726,2558343,2560624,2561673,2562865,2563148 2556733,2557834,2559978,2560714,2561815,2562896,2563863 Gene ID= ENSG00000157873.17 TPM= 8.76 Transcript Type= NA chr1 2556366 2563829 2556366 2563829 + ENST00000355716.4@TNFRSF14 ENST00000355716.4 protein_coding 2556366,2557726,2558343,2559823,2560624,2561673,2562865,2563148 2556733,2557834,2558468,2559978,2560714,2561815,2562896,2563829 Gene ID= ENSG00000157873.17 TPM= 62.46 Transcript Type= protein_coding chr1 2587041 2591470 2587041 2591470 + transcript620.chr1.nic@FAM213B transcript620.chr1.nic protein_coding 2587041,2587741,2588390,2588550,2588922,2589410 2587295,2587792,2588453,2588625,2589040,2591470 Gene ID= ENSG00000157870.14 TPM= 4.35 Transcript Type= NA chr1 2586798 2591463 2586798 2591463 + ENST00000378427.5@FAM213B ENST00000378427.5 protein_coding 2586798,2587091,2587741,2588390,2588550,2588954,2589410 2586948,2587295,2587792,2588453,2588625,2589040,2591463 Gene ID= ENSG00000157870.14 TPM= 20.65 Transcript Type= protein_coding chr1 2586775 2591468 2586775 2591468 + ENST00000419916.6@FAM213B ENST00000419916.6 protein_coding 2586775,2587091,2587741,2588390,2588550,2588922,2589410 2586948,2587295,2587792,2588453,2588625,2589040,2591468 Gene ID= ENSG00000157870.14 TPM= 54.15 Transcript Type= protein_coding chr1 2586780 2591467 2586780 2591467 + ENST00000378424.8@FAM213B ENST00000378424.8 protein_coding 2586780,2587091,2587741,2588336,2588550,2588954,2589410 2586948,2587295,2587792,2588453,2588625,2589040,2591467 Gene ID= ENSG00000157870.14 TPM= 1.63 Transcript Type= protein_coding chr1 2587078 2591469 2587078 2591469 + ENST00000484099.5@FAM213B ENST00000484099.5 protein_coding 2587078,2587741,2588390,2588530,2588954,2589410 2587295,2587792,2588453,2588625,2589040,2591469 Gene ID= ENSG00000157870.14 TPM= 1.63 Transcript Type= processed_transcript chr1 2590642 2594166 2590642 2594166 - transcript622.chr1.nic@MMEL1 transcript622.chr1.nic protein_coding 2593814,2592833,2592655,2591932,2591557,2590642 2594166,2592966,2592720,2592027,2591633,2591089 Gene ID= ENSG00000142606.15 TPM= 2.72 Transcript Type= NA chr1 3487970 3625649 3487970 3625649 - transcript630.chr1.nnic@MEGF6 transcript630.chr1.nnic protein_coding 3625513,3602466,3595338,3579825,3524124,3515402,3514550,3512006,3511550,3510783,3509870,3509075,3507795,3506108,3505422,3505208,3501796,3501177,3500966,3500633,3499796,3499588,3498698,3498371,3497233,3496988,3496655,3495890,3494613,3494371,3493996,3493771,3492639,3490912,3487970 3625649,3602600,3595447,3579929,3524246,3515527,3514672,3512128,3511687,3510902,3509992,3509245,3507923,3506236,3505556,3505342,3501921,3501308,3501094,3500764,3499924,3499716,3498826,3498499,3497361,3497119,3496783,3496018,3494741,3494499,3494124,3493899,3492767,3490959,3490589 Gene ID= ENSG00000162591.15 TPM= 2.72 Transcript Type= NA chr1 3487970 3501652 3487970 3501652 - transcript634.chr1.nic@MEGF6 transcript634.chr1.nic protein_coding 3501177,3500966,3499796,3499588,3499138,3498698,3498371,3497233,3496988,3496655,3495890,3494613,3494371,3493996,3493771,3492639,3490912,3487970 3501652,3501094,3500764,3499716,3499266,3498826,3498499,3497361,3497119,3496783,3496018,3494741,3494499,3494124,3493899,3492767,3490959,3490589 Gene ID= ENSG00000162591.15 TPM= 2.72 Transcript Type= NA chr1 3625002 3630127 3625002 3630127 + ENST00000378344.6@TPRG1L ENST00000378344.6 protein_coding 3625002,3625424,3625713,3627500,3628409 3625273,3625515,3625889,3627653,3630127 Gene ID= ENSG00000158109.14 TPM= 154.85 Transcript Type= protein_coding chr1 3630767 3650108 3630767 3650108 - transcript640.chr1.nnic@WRAP73 transcript640.chr1.nnic protein_coding 3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3631466,3630767 3650108,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632317,3631657,3631117 Gene ID= ENSG00000116213.15 TPM= 3.62 Transcript Type= NA chr1 3630767 3650108 3630767 3650108 - transcript643.chr1.nic@WRAP73 transcript643.chr1.nic protein_coding 3649931,3647408,3646666,3638750,3636995,3635944,3634997,3633398,3632213,3631466,3630767 3650108,3647560,3646782,3638822,3637098,3636030,3635074,3633503,3632338,3631657,3631117 Gene ID= ENSG00000116213.15 TPM= 1.81 Transcript Type= NA chr1 3630767 3650073 3630767 3650073 - ENST00000270708.11@WRAP73 ENST00000270708.11 protein_coding 3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3631466,3630767 3650073,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657,3631117 Gene ID= ENSG00000116213.15 TPM= 48.9 Transcript Type= protein_coding chr1 3630767 3650058 3630767 3650058 - ENST00000378322.7@WRAP73 ENST00000378322.7 protein_coding 3649931,3647408,3646666,3638750,3636995,3635944,3635160,3634997,3633398,3632213,3630767 3650058,3647560,3646782,3638822,3637098,3636030,3635294,3635074,3633503,3632338,3631657 Gene ID= ENSG00000116213.15 TPM= 2.72 Transcript Type= protein_coding chr1 3737150 3747396 3737150 3747396 - transcript652.chr1.nic@TP73-AS1 transcript652.chr1.nic transcribed_unitary_pseudogene 3745607,3743061,3742804,3742430,3740233,3737150 3747396,3743190,3742911,3742517,3740387,3737854 Gene ID= ENSG00000227372.11 TPM= 1.81 Transcript Type= NA chr1 3736119 3747396 3736119 3747396 - transcript656.chr1.nic@TP73-AS1 transcript656.chr1.nic transcribed_unitary_pseudogene 3745607,3743061,3742804,3742430,3740233,3736119 3747396,3743190,3742957,3742517,3740387,3738513 Gene ID= ENSG00000227372.11 TPM= 1.81 Transcript Type= NA chr1 3737150 3747396 3737150 3747396 - transcript658.chr1.nnic@TP73-AS1 transcript658.chr1.nnic transcribed_unitary_pseudogene 3745607,3743061,3742804,3740233,3738223,3737150 3747396,3743190,3742911,3740387,3738513,3737854 Gene ID= ENSG00000227372.11 TPM= 2.26 Transcript Type= NA chr1 3735611 3747396 3735611 3747396 - transcript660.chr1.nic@TP73-AS1 transcript660.chr1.nic transcribed_unitary_pseudogene 3745607,3743061,3742804,3740233,3735611 3747396,3743190,3742911,3740387,3737854 Gene ID= ENSG00000227372.11 TPM= 8.15 Transcript Type= NA chr1 3735611 3747396 3735611 3747396 - transcript662.chr1.nic@TP73-AS1 transcript662.chr1.nic transcribed_unitary_pseudogene 3745607,3743061,3742804,3740233,3735611 3747396,3743190,3742960,3740387,3737854 Gene ID= ENSG00000227372.11 TPM= 9.06 Transcript Type= NA chr1 3737139 3747396 3737139 3747396 - transcript664.chr1.nic@TP73-AS1 transcript664.chr1.nic transcribed_unitary_pseudogene 3745607,3743061,3742804,3740233,3737139 3747396,3743190,3742911,3740387,3738513 Gene ID= ENSG00000227372.11 TPM= 19.92 Transcript Type= NA chr1 3737133 3747396 3737133 3747396 - transcript665.chr1.nic@TP73-AS1 transcript665.chr1.nic transcribed_unitary_pseudogene 3745607,3743061,3742804,3740233,3737133 3747396,3743190,3742957,3740387,3738513 Gene ID= ENSG00000227372.11 TPM= 7.24 Transcript Type= NA chr1 3737149 3747336 3737149 3747336 - ENST00000423764.5@TP73-AS1 ENST00000423764.5 transcribed_unitary_pseudogene 3745607,3743061,3742804,3740233,3737149 3747336,3743190,3742957,3740387,3737854 Gene ID= ENSG00000227372.11 TPM= 16.75 Transcript Type= processed_transcript chr1 3778558 3796504 3778558 3796504 - ENST00000378251.2@LRRC47 ENST00000378251.2 protein_coding 3795862,3786849,3785087,3783996,3782661,3781512,3778558 3796504,3787310,3785203,3784111,3782763,3781601,3781336 Gene ID= ENSG00000130764.9 TPM= 204.65 Transcript Type= protein_coding chr1 3816149 3857218 3816149 3857218 - transcript680.chr1.nic@CEP104 transcript680.chr1.nic protein_coding 3856889,3852295,3848608,3847475,3845289,3844907,3839608,3838964,3837292,3836495,3834925,3833862,3831046,3829791,3829266,3826708,3826370,3825758,3823424,3823174,3816149 3857218,3852421,3848781,3847613,3845351,3844983,3839776,3839119,3837519,3836692,3835092,3834035,3831222,3829997,3829373,3826744,3826436,3825866,3823562,3823241,3816370 Gene ID= ENSG00000116198.12 TPM= 3.62 Transcript Type= NA chr1 3857281 3885429 3857281 3885429 + ENST00000378209.7@DFFB ENST00000378209.7 protein_coding 3857281,3858718,3865812,3867974,3869605,3872472,3883507 3857717,3858844,3866000,3868053,3869775,3872572,3885429 Gene ID= ENSG00000169598.15 TPM= 3.62 Transcript Type= protein_coding chr1 3889125 3900293 3889125 3900293 - transcript688.chr1.nnic@C1orf174 transcript688.chr1.nnic protein_coding 3900172,3892883,3891626,3890569,3889125 3900293,3892996,3891779,3891057,3890073 Gene ID= ENSG00000198912.10 TPM= 1.81 Transcript Type= NA chr1 3889125 3900293 3889125 3900293 - transcript693.chr1.nnic@C1orf174 transcript693.chr1.nnic protein_coding 3900172,3891984,3890569,3889125 3900293,3892996,3891891,3890073 Gene ID= ENSG00000198912.10 TPM= 1.81 Transcript Type= NA chr1 3889125 3900285 3889125 3900285 - ENST00000361605.3@C1orf174 ENST00000361605.3 protein_coding 3900172,3892883,3890569,3889125 3900285,3892996,3891057,3890073 Gene ID= ENSG00000198912.10 TPM= 35.32 Transcript Type= protein_coding chr1 5862810 5992441 5862810 5992441 - transcript701.chr1.nic@NPHP4 transcript701.chr1.nic protein_coding 5992244,5986155,5978270,5969087,5967299,5961794,5952700,5948070,5947104,5933147,5927649,5909152,5907115,5905632,5905292,5904617,5890868,5887286,5880114,5877093,5874874,5874471,5873252,5867740,5867030,5866373,5865102,5864338,5863890,5862810 5992441,5986327,5978413,5969259,5967363,5961949,5952836,5948251,5947230,5933329,5927787,5909213,5907222,5905780,5905483,5904804,5891028,5887466,5880239,5877298,5875100,5874657,5873335,5867896,5867115,5866458,5865273,5864517,5864033,5863405 Gene ID= ENSG00000131697.17 TPM= 3.17 Transcript Type= NA chr1 5862818 5992471 5862818 5992471 - ENST00000378156.8@NPHP4 ENST00000378156.8 protein_coding 5992244,5986155,5978270,5969087,5967299,5961794,5952700,5948070,5947104,5933147,5927649,5909152,5907115,5905632,5905292,5904617,5890868,5887286,5880114,5877093,5874874,5874471,5873252,5867740,5867030,5866373,5865102,5864338,5863890,5862818 5992471,5986327,5978413,5969259,5967363,5961949,5952836,5948251,5947230,5933329,5927787,5909213,5907222,5905783,5905483,5904804,5891028,5887466,5880239,5877298,5875100,5874657,5873335,5867896,5867115,5866458,5865273,5864517,5864033,5863405 Gene ID= ENSG00000131697.17 TPM= 8.6 Transcript Type= protein_coding chr1 6026013 6101192 6026013 6101192 + ENST00000341524.5@KCNAB2 ENST00000341524.5 protein_coding 6026013,6040517,6041831,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485 6026445,6040645,6041872,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192 Gene ID= ENSG00000069424.14 TPM= 6.34 Transcript Type= protein_coding chr1 6026013 6101192 6026013 6101192 + ENST00000352527.5@KCNAB2 ENST00000352527.5 protein_coding 6026013,6040517,6072755,6073733,6082195,6085204,6087467,6089008,6090389,6094400,6095323,6095530,6096636,6097269,6098485 6026445,6040645,6072798,6073770,6082274,6085248,6087511,6089051,6090475,6094485,6095443,6095624,6096756,6097357,6101192 Gene ID= ENSG00000069424.14 TPM= 14.49 Transcript Type= protein_coding chr1 6185020 6199612 6185020 6199612 - ENST00000234875.8@RPL22 ENST00000234875.8 protein_coding 6199562,6197652,6192930,6185020 6199612,6197756,6193054,6186816 Gene ID= ENSG00000116251.9 TPM= 282.53 Transcript Type= protein_coding chr1 6186575 6199563 6186575 6199563 - ENST00000480661.1@RPL22 ENST00000480661.1 protein_coding 6197652,6192930,6186575 6199563,6193054,6186816 Gene ID= ENSG00000116251.9 TPM= 5.43 Transcript Type= retained_intron chr1 6221193 6235940 6221193 6235940 - ENST00000343813.9@ICMT ENST00000343813.9 protein_coding 6235717,6234886,6233474,6231902,6221193 6235940,6234974,6233643,6232119,6225262 Gene ID= ENSG00000116237.15 TPM= 27.17 Transcript Type= protein_coding chr1 6223491 6235972 6223491 6235972 - ENST00000489498.5@ICMT ENST00000489498.5 protein_coding 6235717,6234886,6234405,6233474,6231902,6223491 6235972,6234974,6234511,6233643,6232119,6225262 Gene ID= ENSG00000116237.15 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr1 6264273 6385813 6264273 6385813 - ENST00000377855.6@ACOT7 ENST00000377855.6 protein_coding 6385494,6349749,6339433,6333477,6327299,6318492,6294864,6281102,6264273 6385813,6349866,6339589,6333568,6327413,6318578,6294980,6281286,6264695 Gene ID= ENSG00000097021.19 TPM= 1.36 Transcript Type= protein_coding chr1 6264273 6394391 6264273 6394391 - ENST00000361521.8@ACOT7 ENST00000361521.8 protein_coding 6393257,6349749,6339433,6333477,6327299,6318492,6294864,6281102,6264273 6394391,6349866,6339589,6333568,6327413,6318578,6294980,6281286,6264695 Gene ID= ENSG00000097021.19 TPM= 15.85 Transcript Type= protein_coding chr1 6467122 6497390 6467122 6497390 - ENST00000400915.7@PLEKHG5 ENST00000400915.7 protein_coding 6497320,6496493,6477529,6475931,6475462,6475047,6474451,6474013,6473251,6472986,6472527,6471758,6471488,6470990,6470735,6470506,6470236,6469544,6469335,6469042,6467825,6467122 6497390,6496569,6477658,6476036,6475522,6475138,6474587,6474164,6473454,6473174,6472622,6471808,6471637,6471100,6470884,6470643,6470355,6469676,6469450,6469241,6468586,6467572 Gene ID= ENSG00000171680.21 TPM= 13.13 Transcript Type= protein_coding chr1 6467122 6491700 6467122 6491700 - ENST00000377728.7@PLEKHG5 ENST00000377728.7 protein_coding 6491637,6477529,6475931,6475462,6475047,6474451,6474013,6473251,6472986,6472527,6471758,6471488,6470990,6470735,6470506,6470236,6469544,6469335,6469042,6467825,6467122 6491700,6477658,6476036,6475522,6475138,6474587,6474164,6473454,6473174,6472622,6471808,6471637,6471100,6470884,6470643,6470355,6469676,6469450,6469241,6468586,6467572 Gene ID= ENSG00000171680.21 TPM= 4.07 Transcript Type= protein_coding chr1 6521347 6554535 6521347 6554535 - ENST00000377705.5@NOL9 ENST00000377705.5 protein_coding 6554107,6550396,6549571,6545045,6544826,6541830,6533280,6532463,6531968,6528994,6526696,6521347 6554535,6550615,6549698,6545180,6544922,6541927,6533441,6532760,6532079,6529171,6526829,6526003 Gene ID= ENSG00000162408.10 TPM= 12.68 Transcript Type= protein_coding chr1 6579994 6589280 6579994 6589280 + transcript742.chr1.nic@ZBTB48 transcript742.chr1.nic protein_coding 6579994,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916 6580049,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280 Gene ID= ENSG00000204859.12 TPM= 16.3 Transcript Type= NA chr1 6580014 6589280 6580014 6589280 + transcript746.chr1.nnic@ZBTB48 transcript746.chr1.nnic protein_coding 6580014,6580541,6582058,6585919,6586595,6587205,6587478,6588060,6588278,6588756,6588916 6580136,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280 Gene ID= ENSG00000204859.12 TPM= 1.81 Transcript Type= NA chr1 6580002 6589280 6580002 6589280 + transcript753.chr1.nic@ZBTB48 transcript753.chr1.nic protein_coding 6580002,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916 6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280 Gene ID= ENSG00000204859.12 TPM= 3.62 Transcript Type= NA chr1 6579995 6589280 6579995 6589280 + transcript755.chr1.nnic@ZBTB48 transcript755.chr1.nnic protein_coding 6579995,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916 6580049,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280 Gene ID= ENSG00000204859.12 TPM= 1.81 Transcript Type= NA chr1 6580048 6589280 6580048 6589280 + ENST00000377674.8@ZBTB48 ENST00000377674.8 protein_coding 6580048,6580541,6582058,6585919,6586695,6587205,6587478,6588060,6588278,6588756,6588916 6580136,6581299,6582299,6586030,6586787,6587291,6587632,6588196,6588442,6588844,6589280 Gene ID= ENSG00000204859.12 TPM= 15.39 Transcript Type= protein_coding chr1 6590719 6602869 6590719 6602869 - transcript762.chr1.nic@KLHL21 transcript762.chr1.nic protein_coding 6601797,6599047,6595485,6590719 6602869,6599452,6595557,6594110 Gene ID= ENSG00000162413.16 TPM= 12.68 Transcript Type= NA chr1 6590724 6602869 6590724 6602869 - ENST00000377658.8@KLHL21 ENST00000377658.8 protein_coding 6601797,6599047,6595485,6590724 6602869,6599452,6595557,6593658 Gene ID= ENSG00000162413.16 TPM= 105.04 Transcript Type= protein_coding chr1 6613685 6624033 6613685 6624033 + ENST00000377648.4@PHF13 ENST00000377648.4 protein_coding 6613685,6616757,6619803,6621411 6614105,6616858,6620337,6624033 Gene ID= ENSG00000116273.5 TPM= 27.17 Transcript Type= protein_coding chr1 6634168 6701924 6634168 6701924 - ENST00000377577.9@DNAJC11 ENST00000377577.9 protein_coding 6701729,6680908,6678394,6667709,6653911,6652829,6651529,6645789,6645041,6644558,6639902,6638295,6637447,6637198,6636117,6634168 6701924,6681037,6678467,6667810,6654039,6652951,6651602,6645978,6645126,6644674,6640057,6638364,6637504,6637340,6636246,6635700 Gene ID= ENSG00000007923.15 TPM= 185.64 Transcript Type= protein_coding chr1 6785454 6872053 6785454 6872053 + ENST00000490738.5@CAMTA1 ENST00000490738.5 protein_coding 6785454,6825092,6871757 6785575,6825210,6872053 Gene ID= ENSG00000171735.18 TPM= 18.56 Transcript Type= processed_transcript chr1 6785480 6872038 6785480 6872038 + ENST00000473578.5@CAMTA1 ENST00000473578.5 protein_coding 6785480,6820181,6825092,6871757 6785575,6820250,6825210,6872038 Gene ID= ENSG00000171735.18 TPM= 76.52 Transcript Type= protein_coding chr1 6785464 6888201 6785464 6888201 + ENST00000476163.5@CAMTA1 ENST00000476163.5 protein_coding 6785464,6825092,6871757,6887654 6785575,6825210,6871840,6888201 Gene ID= ENSG00000171735.18 TPM= 14.49 Transcript Type= processed_transcript chr1 7771269 7781432 7771269 7781432 + ENST00000054666.10@VAMP3 ENST00000054666.10 protein_coding 7771269,7773442,7777160,7778118,7779626 7771385,7773511,7777318,7778169,7781432 Gene ID= ENSG00000049245.12 TPM= 221.86 Transcript Type= protein_coding chr1 7784313 7812625 7784313 7812625 + transcript805.chr1.nic@PER3 transcript805.chr1.nic protein_coding 7784313,7784654,7785441,7786721,7788045,7793957,7798525,7801113,7803047,7803692,7808893,7809893,7810438 7784376,7785005,7785586,7786836,7788246,7794008,7798673,7801191,7803153,7803848,7808998,7810021,7812625 Gene ID= ENSG00000049246.14 TPM= 3.62 Transcript Type= NA chr1 7847614 7853035 7847614 7853035 - ENST00000361696.9@UTS2 ENST00000361696.9 protein_coding 7852901,7850812,7849640,7847614 7853035,7850922,7849683,7847882 Gene ID= ENSG00000049247.13 TPM= 1.81 Transcript Type= protein_coding chr1 7961663 7985279 7961663 7985279 + ENST00000338639.9@PARK7 ENST00000338639.9 protein_coding 7961663,7962763,7965324,7969345,7970894,7977652,7984894 7961793,7962875,7965425,7969404,7970963,7977738,7985279 Gene ID= ENSG00000116288.12 TPM= 211.44 Transcript Type= protein_coding chr1 8011719 8026308 8011719 8026308 - ENST00000377482.9@ERRFI1 ENST00000377482.9 protein_coding 8026158,8015495,8015308,8011719 8026308,8015692,8015384,8014396 Gene ID= ENSG00000116285.12 TPM= 9.06 Transcript Type= protein_coding chr1 8011728 8026312 8011728 8026312 - transcript821.chr1.nic@ERRFI1 transcript821.chr1.nic protein_coding 8026158,8015495,8011728 8026312,8015692,8015384 Gene ID= ENSG00000116285.12 TPM= 2.72 Transcript Type= NA chr1 8317826 8344165 8317826 8344165 + ENST00000471889.5@SLC45A1 ENST00000471889.5 protein_coding 8317826,8324306,8325298,8325818,8330209,8335437,8337816,8339493,8343747 8318186,8324726,8325390,8326042,8330936,8335590,8337992,8339698,8344165 Gene ID= ENSG00000162426.14 TPM= 2.72 Transcript Type= protein_coding chr1 8352402 8360421 8352402 8360421 - transcript824.chr1.nic@RERE transcript824.chr1.nic protein_coding 8360112,8359764,8358196,8356100,8355419,8352402 8360421,8359986,8358916,8356246,8355599,8355120 Gene ID= ENSG00000142599.17 TPM= 44.37 Transcript Type= NA chr1 8861002 8878690 8861002 8878690 - ENST00000234590.8@ENO1 ENST00000234590.8 protein_coding 8878580,8874824,8871891,8870452,8867988,8867117,8866279,8865285,8863891,8863235,8862887,8861002 8878690,8874917,8871986,8870510,8868057,8867250,8866501,8865482,8864092,8863343,8862945,8861429 Gene ID= ENSG00000074800.13 TPM= 1526.14 Transcript Type= protein_coding chr1 9035107 9069716 9035107 9069716 - ENST00000377424.8@SLC2A5 ENST00000377424.8 protein_coding 9069504,9058152,9057448,9047610,9041785,9040064,9039800,9039552,9038828,9038431,9037897,9035107 9069716,9058250,9057608,9047734,9041937,9040189,9039987,9039662,9038929,9038506,9038024,9037789 Gene ID= ENSG00000142583.17 TPM= 15.39 Transcript Type= protein_coding chr1 9234775 9271337 9234775 9271337 + ENST00000377403.6@H6PD ENST00000377403.6 protein_coding 9234775,9244925,9246966,9262059,9263509 9235066,9245561,9247083,9262328,9271337 Gene ID= ENSG00000049239.12 TPM= 58.86 Transcript Type= protein_coding chr1 9239844 9267898 9239844 9267898 + ENST00000602477.1@H6PD ENST00000602477.1 protein_coding 9239844,9244925,9246966,9262059,9263509 9240018,9245561,9247083,9262328,9267898 Gene ID= ENSG00000049239.12 TPM= 20.83 Transcript Type= protein_coding chr1 9292880 9369532 9292880 9369532 + ENST00000328089.10@SPSB1 ENST00000328089.10 protein_coding 9292880,9355743,9367448 9293071,9356585,9369532 Gene ID= ENSG00000171621.13 TPM= 22.64 Transcript Type= protein_coding chr1 9651745 9728919 9651745 9728919 + ENST00000377346.8@PIK3CD ENST00000377346.8 protein_coding 9651745,9691467,9710424,9715541,9715849,9716440,9716959,9717537,9718694,9719921,9720112,9720611,9720742,9721127,9721444,9721761,9721975,9722244,9722528,9723125,9723969,9724276,9724804,9726909 9651802,9691571,9710596,9715769,9716078,9716619,9717108,9717626,9718915,9720017,9720242,9720661,9720909,9721248,9721587,9721860,9722153,9722356,9722606,9723292,9724092,9724421,9724936,9728919 Gene ID= ENSG00000171608.15 TPM= 3.17 Transcript Type= protein_coding chr1 9689530 9728911 9689530 9728911 + transcript880.chr1.nnic@PIK3CD transcript880.chr1.nnic protein_coding 9689530,9691467,9710424,9715541,9715849,9716440,9716959,9717537,9718694,9719921,9720112,9720611,9720742,9721127,9721444,9721761,9721975,9722244,9722528,9723125,9723969,9724276,9724804,9726909 9689721,9691571,9710596,9715769,9716078,9716619,9717108,9717626,9718915,9720017,9720242,9720661,9720909,9721248,9721587,9721860,9722153,9722356,9722606,9723292,9724092,9724421,9724936,9728911 Gene ID= ENSG00000171608.15 TPM= 2.26 Transcript Type= NA chr1 9729016 9824013 9729016 9824013 - transcript890.chr1.nic@CLSTN1 transcript890.chr1.nic protein_coding 9823643,9773272,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729016 9824013,9773394,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705 Gene ID= ENSG00000171603.16 TPM= 95.24 Transcript Type= NA chr1 9729028 9823984 9729028 9823984 - ENST00000361311.4@CLSTN1 ENST00000361311.4 protein_coding 9823643,9773272,9755114,9751473,9749764,9749461,9744395,9743884,9741094,9737498,9735885,9735467,9734948,9733972,9733401,9731761,9731206,9729028 9823984,9773394,9755309,9751681,9749913,9749646,9744643,9744005,9741256,9737554,9736042,9735615,9735174,9734142,9733546,9731896,9731390,9730705 Gene ID= ENSG00000171603.16 TPM= 39.55 Transcript Type= protein_coding chr1 9848276 9910263 9848276 9910263 - ENST00000377263.5@CTNNBIP1 ENST00000377263.5 protein_coding 9910095,9883705,9877905,9871969,9871187,9848276 9910263,9883738,9877989,9872088,9871277,9850776 Gene ID= ENSG00000178585.14 TPM= 5.43 Transcript Type= protein_coding chr1 9930253 9943407 9930253 9943407 - ENST00000377213.1@LZIC ENST00000377213.1 protein_coding 9943349,9942624,9936519,9935492,9934762,9932803,9931891,9930253 9943407,9942782,9936627,9935627,9934860,9932898,9931972,9930457 Gene ID= ENSG00000162441.11 TPM= 4.53 Transcript Type= protein_coding chr1 9943428 9981766 9943428 9981766 + ENST00000403197.5@NMNAT1 ENST00000403197.5 protein_coding 9943428,9972018,9975592,9981031,9981256 9943515,9972188,9975775,9981170,9981766 Gene ID= ENSG00000173614.13 TPM= 3.62 Transcript Type= protein_coding chr1 9943428 9985498 9943428 9985498 + ENST00000377205.5@NMNAT1 ENST00000377205.5 protein_coding 9943428,9972018,9975592,9981031,9982301 9943515,9972188,9975775,9981170,9985498 Gene ID= ENSG00000173614.13 TPM= 13.58 Transcript Type= protein_coding chr1 9997216 10016020 9997216 10016020 + ENST00000294435.7@RBP7 ENST00000294435.7 protein_coding 9997216,10007570,10008173,10015782 9997331,10007748,10008274,10016020 Gene ID= ENSG00000162444.11 TPM= 2.72 Transcript Type= protein_coding chr1 10210566 10381599 10210566 10381599 + transcript926.chr1.nnic@KIF1B transcript926.chr1.nnic protein_coding 10210566,10232250,10256247,10258493,10261905,10267380,10268152,10271502,10272241,10275428,10276321,10277986,10282400,10291082,10292047,10295086,10295660,10296582,10296897,10297174,10320043,10321709,10323884,10324758,10334520,10336657,10337074,10337371,10339769,10342050,10343232,10345845,10347761,10348649,10352631,10360929,10361692,10363283,10365100,10365409,10368467,10371141,10374316,10374854,10375255,10376545 10210878,10232434,10256323,10258672,10261970,10267558,10268263,10271579,10272306,10275503,10276399,10278128,10282533,10291161,10292122,10295165,10295766,10296665,10297077,10297246,10320136,10321857,10324062,10324895,10334638,10336742,10337203,10337533,10339859,10342168,10343287,10345953,10347827,10348733,10352736,10361043,10361825,10363344,10365245,10365648,10368538,10371262,10374465,10375046,10375373,10381599 Gene ID= ENSG00000054523.17 TPM= 10.87 Transcript Type= NA chr1 10399080 10420144 10399080 10420144 + ENST00000270776.12@PGD ENST00000270776.12 protein_coding 10399080,10399629,10400393,10403071,10404161,10408071,10411418,10413062,10416987,10417376,10418826,10419417,10419630 10399125,10399704,10400572,10403136,10404279,10408140,10411552,10413251,10417117,10417509,10418925,10419539,10420144 Gene ID= ENSG00000142657.20 TPM= 68.82 Transcript Type= protein_coding chr1 10456522 10472526 10456522 10472526 - ENST00000377038.7@DFFA ENST00000377038.7 protein_coding 10472323,10469177,10467190,10463431,10463058,10456522 10472526,10469338,10467332,10463620,10463209,10461702 Gene ID= ENSG00000160049.11 TPM= 9.06 Transcript Type= protein_coding chr1 10462468 10472488 10462468 10472488 - ENST00000377036.2@DFFA ENST00000377036.2 protein_coding 10472323,10469177,10467190,10463431,10462468 10472488,10469338,10467332,10463620,10463209 Gene ID= ENSG00000160049.11 TPM= 9.06 Transcript Type= protein_coding chr1 10474887 10630758 10474887 10630758 + ENST00000356607.8@PEX14 ENST00000356607.8 protein_coding 10474887,10495274,10536213,10599238,10618332,10623019,10624340,10627272,10629531 10475002,10495321,10536297,10599366,10618417,10623121,10624437,10627363,10630758 Gene ID= ENSG00000142655.12 TPM= 11.77 Transcript Type= protein_coding chr1 10647206 10694272 10647206 10694272 - transcript948.chr1.nic@CASZ1 transcript948.chr1.nic protein_coding 10693874,10665083,10659702,10658508,10656646,10655649,10654419,10653377,10650941,10650692,10649283,10649070,10647206 10694272,10665571,10660536,10658576,10656736,10655813,10654591,10654218,10651076,10650755,10649437,10649192,10648139 Gene ID= ENSG00000130940.14 TPM= 2.72 Transcript Type= NA chr1 11012400 11026420 11012400 11026420 + ENST00000240185.7@TARDBP ENST00000240185.7 protein_coding 11012400,11013716,11016844,11018733,11020429,11022124 11012743,11013965,11017007,11018873,11020599,11026420 Gene ID= ENSG00000120948.16 TPM= 95.08 Transcript Type= protein_coding chr1 11054589 11060024 11054589 11060024 - ENST00000376957.6@SRM ENST00000376957.6 protein_coding 11059777,11059225,11058800,11056604,11056011,11055781,11054962,11054589 11060024,11059345,11058892,11056757,11056094,11055926,11055084,11054885 Gene ID= ENSG00000116649.9 TPM= 158.47 Transcript Type= protein_coding chr1 11066618 11099881 11066618 11099881 - ENST00000376936.8@EXOSC10 ENST00000376936.8 protein_coding 11099721,11098020,11095758,11091493,11091014,11090554,11088123,11087800,11087448,11082688,11081082,11080764,11080499,11079711,11077601,11077365,11076842,11074231,11073934,11072087,11070900,11069559,11068645,11068008,11066618 11099881,11098156,11095881,11091597,11091179,11090668,11088198,11087910,11087591,11082878,11081238,11080912,11080549,11079822,11077651,11077443,11076948,11074326,11074008,11072171,11070973,11069730,11068706,11068084,11066748 Gene ID= ENSG00000171824.13 TPM= 41.66 Transcript Type= protein_coding chr1 11106535 11262507 11106535 11262507 - ENST00000361445.8@MTOR ENST00000361445.8 protein_coding 11262445,11259248,11258485,11256933,11255992,11253839,11247819,11247625,11243114,11241553,11240303,11238402,11237843,11234143,11233398,11232436,11231300,11230925,11228668,11216148,11213399,11212796,11212312,11210814,11209312,11204561,11199541,11199258,11167442,11157152,11150126,11146676,11144968,11144648,11139533,11139304,11134351,11133080,11130529,11129738,11128855,11128454,11128004,11127624,11127010,11126622,11124498,11121979,11121246,11117004,11115396,11114813,11114318,11112852,11109649,11109290,11108181,11106535 11262507,11259423,11258593,11257165,11256192,11253973,11248094,11247733,11243300,11241681,11240547,11238617,11238048,11234265,11233487,11232528,11231434,11231054,11228918,11216234,11213566,11212908,11212474,11210906,11209458,11204703,11199703,11199403,11167517,11157291,11150226,11146791,11145045,11144755,11139658,11139435,11134466,11133197,11130777,11129838,11128951,11128552,11128126,11127806,11127144,11126796,11124633,11122126,11121368,11117086,11115468,11114887,11114453,11112917,11109729,11109370,11108286,11107500 Gene ID= ENSG00000198793.12 TPM= 11.77 Transcript Type= protein_coding chr1 11189341 11195981 11189341 11195981 + ENST00000376819.3@ANGPTL7 ENST00000376819.3 protein_coding 11189341,11192270,11193580,11194461,11194854 11189955,11192370,11193774,11194659,11195981 Gene ID= ENSG00000171819.4 TPM= 4.53 Transcript Type= protein_coding chr1 11273206 11288434 11273206 11288434 + ENST00000376810.5@UBIAD1 ENST00000376810.5 protein_coding 11273206,11285644 11274060,11288434 Gene ID= ENSG00000120942.13 TPM= 41.66 Transcript Type= protein_coding chr1 11648367 11654682 11648367 11654682 - ENST00000354287.4@FBXO2 ENST00000354287.4 protein_coding 11654319,11650466,11649945,11649779,11649087,11648367 11654682,11650834,11650074,11649874,11649225,11648828 Gene ID= ENSG00000116661.10 TPM= 59.77 Transcript Type= protein_coding chr1 11654859 11663326 11654859 11663326 + transcript988.chr1.nic@FBXO44 transcript988.chr1.nic protein_coding 11654859,11655806,11658267,11658736,11661130 11654952,11656100,11658628,11658871,11663326 Gene ID= ENSG00000132879.13 TPM= 11.17 Transcript Type= NA chr1 11654375 11662289 11654375 11662289 + ENST00000251546.8@FBXO44 ENST00000251546.8 protein_coding 11654375,11655806,11658267,11658736,11661130 11654581,11656100,11658364,11658871,11662289 Gene ID= ENSG00000132879.13 TPM= 5.59 Transcript Type= protein_coding chr1 11654910 11662291 11654910 11662291 + ENST00000376762.8@FBXO44 ENST00000376762.8 protein_coding 11654910,11655806,11658267,11658736,11661130 11654952,11656100,11658364,11658871,11662291 Gene ID= ENSG00000132879.13 TPM= 20.98 Transcript Type= protein_coding chr1 11664251 11674356 11664251 11674356 + transcript991.chr1.nnic@FBXO6 transcript991.chr1.nnic protein_coding 11664251,11668656,11671266,11671928,11673277,11673615 11664423,11668944,11671392,11672023,11673412,11674356 Gene ID= ENSG00000116663.10 TPM= 14.49 Transcript Type= NA chr1 11664124 11674354 11664124 11674354 + ENST00000376753.8@FBXO6 ENST00000376753.8 protein_coding 11664124,11668656,11671266,11671928,11673277,11673615 11664255,11668944,11671392,11672023,11673412,11674354 Gene ID= ENSG00000116663.10 TPM= 32.6 Transcript Type= protein_coding chr1 11674480 11691650 11674480 11691650 - ENST00000235310.7@MAD2L2 ENST00000235310.7 protein_coding 11691413,11681738,11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674480 11691650,11682016,11681438,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816 Gene ID= ENSG00000116670.14 TPM= 29.43 Transcript Type= protein_coding chr1 11674480 11681150 11674480 11681150 - transcript994.chr1.nic@MAD2L2 transcript994.chr1.nic protein_coding 11681039,11680562,11680353,11677543,11676848,11675658,11675082,11674480 11681150,11680613,11680471,11677614,11676948,11676140,11675174,11674816 Gene ID= ENSG00000116670.14 TPM= 1.81 Transcript Type= NA chr1 11674481 11681214 11674481 11681214 - ENST00000376692.8@MAD2L2 ENST00000376692.8 protein_coding 11681039,11680562,11680353,11677543,11676848,11676046,11675658,11675082,11674481 11681214,11680613,11680471,11677614,11676948,11676140,11675731,11675174,11674816 Gene ID= ENSG00000116670.14 TPM= 26.71 Transcript Type= protein_coding chr1 11736132 11750770 11736132 11750770 + transcript1005.chr1.nic@AGTRAP transcript1005.chr1.nic protein_coding 11736132,11745803,11748415,11750077 11736235,11747545,11748610,11750770 Gene ID= ENSG00000177674.15 TPM= 4.53 Transcript Type= NA chr1 11736147 11750771 11736147 11750771 + ENST00000376629.8@AGTRAP ENST00000376629.8 protein_coding 11736147,11745803,11747440,11748415,11750077 11736235,11745837,11747545,11748589,11750771 Gene ID= ENSG00000177674.15 TPM= 18.11 Transcript Type= protein_coding chr1 11736155 11750765 11736155 11750765 + ENST00000314340.9@AGTRAP ENST00000314340.9 protein_coding 11736155,11745803,11747440,11748415,11750077 11736235,11745837,11747545,11748610,11750765 Gene ID= ENSG00000177674.15 TPM= 74.25 Transcript Type= protein_coding chr1 11787788 11789584 11787788 11789584 + transcript1021.chr1.nic@C1orf167 transcript1021.chr1.nic protein_coding 11787788,11788149,11788652,11789270 11788047,11788378,11788746,11789584 Gene ID= ENSG00000215910.7 TPM= 2.72 Transcript Type= NA chr1 11787812 11789585 11787812 11789585 + ENST00000482358.1@C1orf167 ENST00000482358.1 protein_coding 11787812,11788243,11788652,11789270 11788047,11788378,11788746,11789585 Gene ID= ENSG00000215910.7 TPM= 6.34 Transcript Type= processed_transcript chr1 11785732 11805413 11785732 11805413 - ENST00000376585.6@MTHFR ENST00000376585.6 protein_coding 11805380,11803405,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785732 11805413,11804532,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898 Gene ID= ENSG00000177000.11 TPM= 9.81 Transcript Type= protein_coding chr1 11785753 11805952 11785753 11805952 - transcript1010.chr1.nic@MTHFR transcript1010.chr1.nic protein_coding 11805347,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785753 11805952,11803129,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898 Gene ID= ENSG00000177000.11 TPM= 5.73 Transcript Type= NA chr1 11785723 11805413 11785723 11805413 - ENST00000376592.6@MTHFR ENST00000376592.6 protein_coding 11805380,11802881,11801161,11800212,11796206,11795098,11794729,11794358,11793907,11792278,11791207,11785723 11805413,11804532,11801399,11800322,11796399,11795348,11794863,11794538,11794089,11792379,11791326,11790898 Gene ID= ENSG00000177000.11 TPM= 6.18 Transcript Type= protein_coding chr1 11806211 11843144 11806211 11843144 + ENST00000346436.10@CLCN6 ENST00000346436.10 protein_coding 11806211,11807131,11815846,11816615,11819488,11822695,11823707,11824486,11826156,11827089,11828106,11828458,11829196,11833515,11833877,11834236,11834484,11835967,11836999,11837343,11838335,11838535,11840143 11806349,11807190,11815911,11816680,11819554,11822801,11823833,11824553,11826214,11827221,11828219,11828624,11829322,11833638,11834030,11834395,11834590,11836153,11837156,11837499,11838442,11838660,11843144 Gene ID= ENSG00000011021.21 TPM= 8.15 Transcript Type= protein_coding chr1 11919590 11926472 11919590 11926472 - transcript1035.chr1.nnic@KIAA2013 transcript1035.chr1.nnic protein_coding 11925205,11923191,11922636,11919590 11926472,11923489,11923115,11920332 Gene ID= ENSG00000116685.15 TPM= 18.11 Transcript Type= NA chr1 11919591 11926423 11919591 11926423 - ENST00000376572.7@KIAA2013 ENST00000376572.7 protein_coding 11925205,11922636,11919591 11926423,11923489,11920332 Gene ID= ENSG00000116685.15 TPM= 253.85 Transcript Type= protein_coding chr1 11922175 11926428 11922175 11926428 - ENST00000376576.3@KIAA2013 ENST00000376576.3 protein_coding 11925205,11922175 11926428,11923489 Gene ID= ENSG00000116685.15 TPM= 3.92 Transcript Type= protein_coding chr1 11934753 11975537 11934753 11975537 + ENST00000196061.4@PLOD1 ENST00000196061.4 protein_coding 11934753,11947976,11949773,11950357,11952623,11954830,11956917,11957842,11958516,11960646,11963532,11964175,11964644,11965480,11966251,11966987,11970670,11972872,11974653 11934855,11948067,11949906,11950520,11952735,11954893,11957014,11957943,11958647,11960767,11963636,11964300,11964785,11965593,11966316,11967091,11970816,11972997,11975537 Gene ID= ENSG00000083444.16 TPM= 124.97 Transcript Type= protein_coding chr1 11980256 12013520 11980256 12013520 + transcript1053.chr1.nic@MFN2 transcript1053.chr1.nic protein_coding 11980256,11981970,11989165,11992279,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496 11980484,11982114,11989343,11992463,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013520 Gene ID= ENSG00000116688.16 TPM= 8.38 Transcript Type= NA chr1 11980240 12013520 11980240 12013520 + transcript1058.chr1.nic@MFN2 transcript1058.chr1.nic protein_coding 11980240,11981810,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496 11980484,11982114,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013520 Gene ID= ENSG00000116688.16 TPM= 8.68 Transcript Type= NA chr1 11980181 12013514 11980181 12013514 + ENST00000444836.5@MFN2 ENST00000444836.5 protein_coding 11980181,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496 11980484,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013514 Gene ID= ENSG00000116688.16 TPM= 6.86 Transcript Type= protein_coding chr1 11980312 12013508 11980312 12013508 + ENST00000235329.9@MFN2 ENST00000235329.9 protein_coding 11980312,11981970,11989165,11992555,11996156,11997297,11998770,11998988,12001401,12001769,12001982,12003992,12004509,12004825,12005711,12006538,12007053,12009592,12011496 11980484,11982114,11989343,11992690,11996318,11997421,11998878,11999095,12001554,12001836,12002103,12004118,12004613,12004927,12005931,12006693,12007249,12009726,12013508 Gene ID= ENSG00000116688.16 TPM= 86.55 Transcript Type= protein_coding chr1 12019455 12032043 12019455 12032043 + transcript1064.chr1.nic@MIIP transcript1064.chr1.nic protein_coding 12019455,12021645,12022095,12022833,12029033,12029223,12030028,12031266,12031722 12019552,12021840,12022442,12022917,12029141,12029894,12030124,12031403,12032043 Gene ID= ENSG00000116691.10 TPM= 7.47 Transcript Type= NA chr1 12019455 12032043 12019455 12032043 + transcript1065.chr1.nic@MIIP transcript1065.chr1.nic protein_coding 12019455,12021645,12022095,12022833,12029033,12029223,12031266,12031722 12019552,12021840,12022442,12022917,12029141,12030124,12031403,12032043 Gene ID= ENSG00000116691.10 TPM= 6.57 Transcript Type= NA chr1 12019455 12032038 12019455 12032038 + transcript1066.chr1.nic@MIIP transcript1066.chr1.nic protein_coding 12019455,12021645,12022095,12022833,12029033,12031266,12031722 12019552,12021840,12022442,12022917,12030124,12031403,12032038 Gene ID= ENSG00000116691.10 TPM= 2.04 Transcript Type= NA chr1 12019466 12032045 12019466 12032045 + ENST00000235332.5@MIIP ENST00000235332.5 protein_coding 12019466,12021645,12022095,12022833,12029033,12029223,12029765,12030028,12031266,12031722 12019552,12021840,12022442,12022917,12029141,12029281,12029894,12030124,12031403,12032045 Gene ID= ENSG00000116691.10 TPM= 26.49 Transcript Type= protein_coding chr1 12167003 12209228 12167003 12209228 + ENST00000376259.6@TNFRSF1B ENST00000376259.6 protein_coding 12167003,12188796,12190957,12191774,12192431,12192863,12193955,12194584,12201967,12206740 12167169,12188895,12191085,12191923,12192524,12193098,12194032,12194618,12202171,12209228 Gene ID= ENSG00000028137.18 TPM= 105.79 Transcript Type= protein_coding chr1 12167003 12209228 12167003 12209228 + ENST00000492361.1@TNFRSF1B ENST00000492361.1 protein_coding 12167003,12190957,12191774,12192431,12192863,12193955,12194584,12201967,12206740 12167169,12191085,12191923,12192524,12193098,12194032,12194618,12202171,12209228 Gene ID= ENSG00000028137.18 TPM= 9.81 Transcript Type= processed_transcript chr1 12567910 12617731 12567910 12617731 - ENST00000616661.4@DHRS3 ENST00000616661.4 protein_coding 12617154,12580523,12579293,12578718,12572728,12567910 12617731,12580666,12579412,12578956,12572853,12568424 Gene ID= ENSG00000162496.8 TPM= 74.25 Transcript Type= protein_coding chr1 13474977 13514048 13474977 13514048 - ENST00000376085.3@LRRC38 ENST00000376085.3 protein_coding 13512963,13474977 13514048,13476099 Gene ID= ENSG00000162494.5 TPM= 69.73 Transcript Type= protein_coding chr1 13487362 13493155 13487362 13493155 + transcript1091.chr1.nnic@NA transcript1091.chr1.nnic NA 13487362,13488739,13492785 13487872,13488841,13493155 Gene ID= novel_gene_chr1_1092 TPM= 1.81 Transcript Type= NA chr1 13583465 13617957 13583465 13617957 + ENST00000294489.10@PDPN ENST00000294489.10 protein_coding 13583465,13607173,13610387,13613687,13614300,13615905 13584100,13607306,13610516,13613725,13614411,13617957 Gene ID= ENSG00000162493.16 TPM= 2.72 Transcript Type= protein_coding chr1 13704855 13825079 13704855 13825079 + ENST00000235372.11@PRDM2 ENST00000235372.11 protein_coding 13704855,13715541,13731000,13732779,13742005,13749361,13773078,13778418,13816427,13823159 13705645,13715614,13731117,13732882,13742157,13749487,13773188,13782831,13816570,13825079 Gene ID= ENSG00000116731.22 TPM= 1.81 Transcript Type= protein_coding chr1 13700240 13825065 13700240 13825065 + ENST00000376048.9@PRDM2 ENST00000376048.9 protein_coding 13700240,13715541,13731000,13732779,13742005,13749361,13816427,13823159 13700300,13715614,13731117,13732882,13742157,13749487,13816570,13825065 Gene ID= ENSG00000116731.22 TPM= 1.81 Transcript Type= protein_coding chr1 14924130 15068152 14924130 15068152 + ENST00000361144.9@KAZN ENST00000361144.9 protein_coding 14924130,14960684,15034749,15043989,15056091,15060172,15063572,15065630 14924572,14960875,15034885,15044159,15056280,15060302,15063622,15068152 Gene ID= ENSG00000189337.16 TPM= 44.37 Transcript Type= protein_coding chr1 15114204 15152475 15114204 15152475 - transcript1109.chr1.nnic@TMEM51-AS1 transcript1109.chr1.nnic antisense_RNA 15152291,15124228,15120972,15118327,15114204 15152475,15124373,15121059,15118584,15117807 Gene ID= ENSG00000175147.11 TPM= 1.81 Transcript Type= NA chr1 15137336 15153614 15137336 15153614 - transcript1114.chr1.nnic@TMEM51-AS1 transcript1114.chr1.nnic antisense_RNA 15152291,15151325,15137336 15153614,15151493,15138331 Gene ID= ENSG00000175147.11 TPM= 1.81 Transcript Type= NA chr1 15152544 15220479 15152544 15220479 + transcript1111.chr1.nnic@TMEM51 transcript1111.chr1.nnic protein_coding 15152544,15210490,15214895,15219326 15153238,15210562,15215431,15220479 Gene ID= ENSG00000171729.13 TPM= 13.81 Transcript Type= NA chr1 15152590 15220479 15152590 15220479 + transcript1115.chr1.nnic@TMEM51 transcript1115.chr1.nnic protein_coding 15152590,15214895,15219326 15153238,15215431,15220479 Gene ID= ENSG00000171729.13 TPM= 3.85 Transcript Type= NA chr1 15152566 15220339 15152566 15220339 + ENST00000376014.7@TMEM51 ENST00000376014.7 protein_coding 15152566,15210490,15214895,15219326 15152784,15210562,15215431,15220339 Gene ID= ENSG00000171729.13 TPM= 1.81 Transcript Type= protein_coding chr1 15153789 15220480 15153789 15220480 + ENST00000376008.2@TMEM51 ENST00000376008.2 protein_coding 15153789,15210490,15214895,15219326 15153954,15210562,15215431,15220480 Gene ID= ENSG00000171729.13 TPM= 21.96 Transcript Type= protein_coding chr1 15153733 15220408 15153733 15220408 + ENST00000400796.7@TMEM51 ENST00000400796.7 protein_coding 15153733,15214895,15219326 15153954,15215431,15220408 Gene ID= ENSG00000171729.13 TPM= 6.57 Transcript Type= protein_coding chr1 15409880 15430338 15409880 15430338 + transcript1129.chr1.nnic@EFHD2 transcript1129.chr1.nnic protein_coding 15409880,15425871,15428593 15410279,15426018,15430338 Gene ID= ENSG00000142634.12 TPM= 6.34 Transcript Type= NA chr1 15409895 15430343 15409895 15430343 + ENST00000375980.8@EFHD2 ENST00000375980.8 protein_coding 15409895,15425871,15427150,15428593 15410279,15426018,15427284,15430343 Gene ID= ENSG00000142634.12 TPM= 207.37 Transcript Type= protein_coding chr1 15456729 15472091 15456729 15472091 + ENST00000359621.4@CELA2A ENST00000359621.4 protein_coding 15456729,15457086,15461561,15462733,15463386,15465999,15467386,15471990 15456793,15457174,15461658,15462861,15463522,15466144,15467538,15472091 Gene ID= ENSG00000142615.7 TPM= 8.15 Transcript Type= protein_coding chr1 15476088 15488094 15476088 15488094 + transcript1143.chr1.nnic@CELA2B transcript1143.chr1.nnic protein_coding 15476088,15476457,15481098,15482265,15483264,15485901,15487285 15476165,15476545,15481195,15482382,15483400,15486046,15488094 Gene ID= ENSG00000215704.9 TPM= 1.81 Transcript Type= NA chr1 15476101 15491400 15476101 15491400 + ENST00000375910.7@CELA2B ENST00000375910.7 protein_coding 15476101,15476457,15481098,15482265,15483264,15485901,15487285,15491295 15476165,15476545,15481195,15482393,15483400,15486046,15487437,15491400 Gene ID= ENSG00000215704.9 TPM= 9.06 Transcript Type= protein_coding chr1 15491401 15526599 15491401 15526599 - transcript1138.chr1.nnic@CASP9 transcript1138.chr1.nnic protein_coding 15526191,15518110,15507873,15506899,15505990,15504611,15495273,15493892,15491401 15526599,15518395,15507907,15507075,15506079,15504758,15495452,15494001,15493035 Gene ID= ENSG00000132906.17 TPM= 2.42 Transcript Type= NA chr1 15492270 15524295 15492270 15524295 - ENST00000333868.9@CASP9 ENST00000333868.9 protein_coding 15524069,15518110,15507873,15506899,15505990,15504611,15495273,15493892,15492270 15524295,15518395,15507907,15507075,15506079,15504758,15495452,15494001,15493035 Gene ID= ENSG00000132906.17 TPM= 23.25 Transcript Type= protein_coding chr1 15492270 15524347 15492270 15524347 - ENST00000348549.9@CASP9 ENST00000348549.9 protein_coding 15524069,15518110,15495273,15493892,15492270 15524347,15518395,15495452,15494001,15493035 Gene ID= ENSG00000132906.17 TPM= 1.51 Transcript Type= protein_coding chr1 15526813 15571733 15526813 15571733 + ENST00000375847.7@DNAJC16 ENST00000375847.7 protein_coding 15526813,15529088,15534237,15536475,15544399,15546767,15548270,15559526,15562142,15563929,15564283,15565919,15566082,15567099,15567778 15526958,15529272,15534303,15536814,15544583,15546871,15548428,15559656,15562325,15564111,15564359,15565999,15566180,15567269,15571733 Gene ID= ENSG00000116138.12 TPM= 2.26 Transcript Type= protein_coding chr1 15526813 15571731 15526813 15571731 + ENST00000616884.4@DNAJC16 ENST00000616884.4 protein_coding 15526813,15534237,15536475,15544399,15546767,15548270,15559526,15562142,15563929,15564283,15565919,15566082,15567099,15567778 15526958,15534303,15536814,15544583,15546871,15548428,15559656,15562325,15564111,15564359,15565999,15566180,15567269,15571731 Gene ID= ENSG00000116138.12 TPM= 3.17 Transcript Type= protein_coding chr1 15571701 15585023 15571701 15585023 - transcript1148.chr1.nnic@AGMAT transcript1148.chr1.nnic protein_coding 15584696,15583193,15580094,15578859,15577685,15574757,15573120,15571701 15585023,15583395,15580142,15579054,15577864,15574841,15573724,15572005 Gene ID= ENSG00000116771.5 TPM= 1.81 Transcript Type= NA chr1 15684289 15734768 15684289 15734768 + transcript1157.chr1.nic@PLEKHM2 transcript1157.chr1.nic protein_coding 15684289,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731950,15732350,15732612,15733797 15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734768 Gene ID= ENSG00000116786.11 TPM= 6.11 Transcript Type= NA chr1 15684289 15734768 15684289 15734768 + transcript1159.chr1.nic@PLEKHM2 transcript1159.chr1.nic protein_coding 15684289,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731889,15732350,15733797 15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732728,15734768 Gene ID= ENSG00000116786.11 TPM= 4.98 Transcript Type= NA chr1 15684332 15734769 15684332 15734769 + ENST00000375799.7@PLEKHM2 ENST00000375799.7 protein_coding 15684332,15716237,15716707,15717893,15718538,15719734,15721329,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731889,15732350,15732612,15733797 15684618,15716343,15716816,15717992,15718625,15719920,15721388,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734769 Gene ID= ENSG00000116786.11 TPM= 128.36 Transcript Type= protein_coding chr1 15684390 15734769 15684390 15734769 + ENST00000375793.2@PLEKHM2 ENST00000375793.2 protein_coding 15684390,15716237,15716707,15717893,15718538,15719734,15725317,15727014,15728079,15728267,15728669,15729102,15729797,15730532,15731192,15731889,15732350,15732612,15733797 15684618,15716343,15716816,15717992,15718625,15719920,15725545,15727832,15728148,15728357,15728733,15729190,15729929,15730722,15731257,15732048,15732529,15732728,15734769 Gene ID= ENSG00000116786.11 TPM= 18.79 Transcript Type= protein_coding chr1 15757913 15786593 15757913 15786593 + transcript1171.chr1.nic@FBLIM1 transcript1171.chr1.nic protein_coding 15757913,15758174,15764493,15764964,15767376,15768528,15770409,15774618,15777170,15784548 15758043,15758329,15764685,15765233,15767563,15768630,15770578,15774796,15777287,15786593 Gene ID= ENSG00000162458.12 TPM= 5.72 Transcript Type= NA chr1 15758734 15786593 15758734 15786593 + transcript1175.chr1.nic@FBLIM1 transcript1175.chr1.nic protein_coding 15758734,15764493,15764964,15767376,15768528,15770409,15774618,15777170,15784548 15758848,15764547,15765233,15767563,15768630,15770578,15774796,15777287,15786593 Gene ID= ENSG00000162458.12 TPM= 9.12 Transcript Type= NA chr1 15758419 15786594 15758419 15786594 + ENST00000375766.7@FBLIM1 ENST00000375766.7 protein_coding 15758419,15764496,15764964,15767376,15768528,15770409,15774618,15777170,15784548 15758848,15764685,15765233,15767563,15768630,15770578,15774796,15777287,15786594 Gene ID= ENSG00000162458.12 TPM= 78.17 Transcript Type= protein_coding chr1 15941871 15976148 15941871 15976148 - transcript1198.chr1.nnic@ZBTB17 transcript1198.chr1.nnic protein_coding 15975983,15973039,15948291,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941871 15976148,15973125,15948497,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252 Gene ID= ENSG00000116809.11 TPM= 3.4 Transcript Type= NA chr1 15941871 15976089 15941871 15976089 - transcript1199.chr1.nic@ZBTB17 transcript1199.chr1.nic protein_coding 15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15943808,15943599,15943399,15943064,15942529,15942331,15941871 15976089,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943715,15943519,15943194,15942738,15942420,15942252 Gene ID= ENSG00000116809.11 TPM= 2.94 Transcript Type= NA chr1 15941871 15976148 15941871 15976148 - transcript1200.chr1.nic@ZBTB17 transcript1200.chr1.nic protein_coding 15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943599,15943399,15943064,15942529,15942331,15941871 15976148,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943519,15943194,15942738,15942420,15942252 Gene ID= ENSG00000116809.11 TPM= 2.04 Transcript Type= NA chr1 15941869 15976126 15941869 15976126 - ENST00000375743.8@ZBTB17 ENST00000375743.8 protein_coding 15975983,15973039,15948291,15946935,15946154,15945715,15944937,15944697,15944300,15943808,15943599,15943399,15943064,15942529,15942331,15941869 15976126,15973125,15948497,15947123,15946294,15945840,15945202,15944839,15944600,15943895,15943715,15943519,15943194,15942738,15942420,15942252 Gene ID= ENSG00000116809.11 TPM= 55.01 Transcript Type= protein_coding chr1 16014028 16018790 16014028 16018790 - ENST00000311890.13@HSPB7 ENST00000311890.13 protein_coding 16017765,16017074,16014028 16018790,16017207,16015759 Gene ID= ENSG00000173641.17 TPM= 552.25 Transcript Type= protein_coding chr1 16014028 16018041 16014028 16018041 - ENST00000411503.5@HSPB7 ENST00000411503.5 protein_coding 16017765,16017089,16014028 16018041,16017207,16015759 Gene ID= ENSG00000173641.17 TPM= 25.9 Transcript Type= protein_coding chr1 16014028 16018043 16014028 16018043 - ENST00000442459.2@HSPB7 ENST00000442459.2 protein_coding 16017074,16014028 16018043,16015759 Gene ID= ENSG00000173641.17 TPM= 43.33 Transcript Type= retained_intron chr1 16043736 16057307 16043736 16057307 + transcript1239.chr1.nic@CLCNKB transcript1239.chr1.nic protein_coding 16043736,16044486,16045558,16046535,16047905,16048343,16048504,16049120,16049618,16049815,16050516,16050875,16051478,16051710,16052198,16053639,16055435,16055678,16056422,16056869 16043880,16044592,16045686,16046663,16048044,16048420,16048582,16049245,16049702,16049916,16050600,16051048,16051547,16051820,16052411,16053772,16055523,16055758,16056508,16057307 Gene ID= ENSG00000184908.17 TPM= 4.37 Transcript Type= NA chr1 16048789 16057308 16048789 16057308 + ENST00000375667.7@CLCNKB ENST00000375667.7 protein_coding 16048789,16049618,16049815,16050516,16050875,16051478,16051710,16052198,16053639,16055435,16055678,16056422,16056869 16049245,16049702,16049916,16050600,16051048,16051547,16051820,16052411,16053772,16055523,16055758,16056508,16057308 Gene ID= ENSG00000184908.17 TPM= 1.66 Transcript Type= protein_coding chr1 16043777 16057308 16043777 16057308 + ENST00000375679.8@CLCNKB ENST00000375679.8 protein_coding 16043777,16044486,16045558,16046535,16047905,16048343,16048504,16049120,16049618,16049815,16050516,16050875,16051478,16051710,16052198,16053639,16055435,16055675,16056422,16056869 16043880,16044592,16045686,16046663,16048044,16048420,16048582,16049245,16049702,16049916,16050600,16051048,16051547,16051820,16052411,16053772,16055523,16055758,16056508,16057308 Gene ID= ENSG00000184908.17 TPM= 8.45 Transcript Type= protein_coding chr1 16057770 16068564 16057770 16068564 - transcript1243.chr1.nnic@FAM131C transcript1243.chr1.nnic protein_coding 16068366,16063521,16062499,16062099,16059869,16059494,16057770 16068564,16063636,16062534,16062192,16060051,16059604,16058717 Gene ID= ENSG00000185519.8 TPM= 4.53 Transcript Type= NA chr1 16057769 16073626 16057769 16073626 - ENST00000375662.4@FAM131C ENST00000375662.4 protein_coding 16073421,16063521,16062499,16062099,16059869,16059494,16057769 16073626,16063636,16062534,16062192,16060051,16059604,16058717 Gene ID= ENSG00000185519.8 TPM= 27.17 Transcript Type= protein_coding chr1 16124337 16156087 16124337 16156087 - ENST00000358432.7@EPHA2 ENST00000358432.7 protein_coding 16155848,16150896,16148378,16138275,16137853,16135655,16135036,16134468,16133860,16133481,16133180,16132378,16132064,16131721,16130226,16129434,16124337 16156087,16150963,16149047,16138430,16138185,16135770,16135189,16134567,16133915,16133606,16133368,16132439,16132273,16131870,16130419,16129589,16125320 Gene ID= ENSG00000142627.12 TPM= 18.11 Transcript Type= protein_coding chr1 16155215 16183175 16155215 16183175 + transcript1253.chr1.nnic@AL451042.2 transcript1253.chr1.nnic antisense_RNA 16155215,16156971,16182549 16155755,16157179,16183175 Gene ID= ENSG00000227959.1 TPM= 1.81 Transcript Type= NA chr1 16155211 16157329 16155211 16157329 + ENST00000424774.1@AL451042.2 ENST00000424774.1 antisense_RNA 16155211,16156971 16155755,16157329 Gene ID= ENSG00000227959.1 TPM= 1.81 Transcript Type= antisense_RNA chr1 16197856 16208521 16197856 16208521 - transcript1256.chr1.nic@ARHGEF19 transcript1256.chr1.nic protein_coding 16207944,16207675,16207522,16206948,16206180,16205931,16205538,16205351,16205087,16204759,16202416,16201782,16199150,16197856 16208521,16207777,16207598,16207210,16206340,16206083,16205667,16205425,16205176,16204919,16202574,16201861,16199254,16198744 Gene ID= ENSG00000142632.16 TPM= 19.47 Transcript Type= NA chr1 16198098 16207657 16198098 16207657 - transcript1257.chr1.nic@ARHGEF19 transcript1257.chr1.nic protein_coding 16207522,16206948,16206180,16205931,16205538,16205351,16205087,16204759,16202416,16201782,16199150,16198098 16207657,16207210,16206340,16206083,16205667,16205425,16205176,16204919,16202574,16201861,16199254,16198744 Gene ID= ENSG00000142632.16 TPM= 14.94 Transcript Type= NA chr1 16198102 16206563 16198102 16206563 - transcript1261.chr1.nic@ARHGEF19 transcript1261.chr1.nic protein_coding 16206180,16205931,16205538,16205351,16205087,16204759,16202416,16201782,16199150,16198102 16206563,16206083,16205667,16205425,16205176,16204919,16202574,16201861,16199254,16198744 Gene ID= ENSG00000142632.16 TPM= 5.43 Transcript Type= NA chr1 16228676 16237190 16228676 16237190 - transcript1268.chr1.nnic@RSG1 transcript1268.chr1.nnic protein_coding 16236631,16233612,16232893,16232499,16228676 16237190,16233764,16233017,16232646,16232297 Gene ID= ENSG00000132881.11 TPM= 45.28 Transcript Type= NA chr1 16231700 16237162 16231700 16237162 - ENST00000375599.7@RSG1 ENST00000375599.7 protein_coding 16236631,16233612,16232893,16232510,16231700 16237162,16233764,16233017,16232646,16232297 Gene ID= ENSG00000132881.11 TPM= 4.53 Transcript Type= protein_coding chr1 16246850 16352483 16246850 16352483 - transcript1271.chr1.nnic@FBXO42 transcript1271.chr1.nnic protein_coding 16352255,16316437,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16246850 16352483,16316568,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785 Gene ID= ENSG00000037637.10 TPM= 9.96 Transcript Type= NA chr1 16246839 16352454 16246839 16352454 - ENST00000375592.7@FBXO42 ENST00000375592.7 protein_coding 16352255,16315169,16305803,16294783,16256606,16255711,16253635,16253096,16252288,16246839 16352454,16315435,16305919,16294917,16256759,16255821,16253731,16253152,16252404,16251785 Gene ID= ENSG00000037637.10 TPM= 26.26 Transcript Type= protein_coding chr1 16367083 16398142 16367083 16398142 + ENST00000401088.8@SZRD1 ENST00000401088.8 protein_coding 16367083,16391375,16393228,16395038 16367308,16391424,16393482,16398142 Gene ID= ENSG00000055070.16 TPM= 46.64 Transcript Type= protein_coding chr1 16367225 16398145 16367225 16398145 + ENST00000401089.3@SZRD1 ENST00000401089.3 protein_coding 16367225,16393228,16395038 16367308,16393482,16398145 Gene ID= ENSG00000055070.16 TPM= 70.18 Transcript Type= protein_coding chr1 16440672 16460078 16440672 16460078 + ENST00000337132.9@NECAP2 ENST00000337132.9 protein_coding 16440672,16443632,16447870,16448060,16449093,16451838,16455818,16458842 16440853,16443732,16447974,16448141,16449201,16452015,16455893,16460078 Gene ID= ENSG00000157191.19 TPM= 145.34 Transcript Type= protein_coding chr1 16440736 16460077 16440736 16460077 + ENST00000443980.6@NECAP2 ENST00000443980.6 protein_coding 16440736,16443632,16447870,16448060,16449093,16451838,16458842 16440853,16443732,16447974,16448141,16449201,16452015,16460077 Gene ID= ENSG00000157191.19 TPM= 4.53 Transcript Type= protein_coding chr1 16440758 16460077 16440758 16460077 + ENST00000496239.5@NECAP2 ENST00000496239.5 protein_coding 16440758,16443632,16447870,16448060,16449093,16455818,16458842 16440853,16443732,16447974,16448141,16452015,16455893,16460077 Gene ID= ENSG00000157191.19 TPM= 2.26 Transcript Type= retained_intron chr1 16440736 16441619 16440736 16441619 + ENST00000486390.1@NECAP2 ENST00000486390.1 protein_coding 16440736,16441166 16440853,16441619 Gene ID= ENSG00000157191.19 TPM= 2.72 Transcript Type= processed_transcript chr1 16562426 16613527 16562426 16613527 - transcript1306.chr1.nnic@NBPF1 transcript1306.chr1.nnic protein_coding 16613338,16608508,16594931,16594592,16593441,16592159,16591847,16589899,16588849,16587725,16587050,16585489,16583594,16582544,16581420,16580745,16579193,16577317,16576267,16575157,16574487,16573142,16569073,16567979,16567179,16566408,16565633,16564807,16562426 16613527,16608779,16595013,16594661,16593567,16592313,16592056,16590001,16589063,16587797,16587261,16585698,16583696,16582758,16581492,16580956,16579402,16577419,16576481,16575229,16574692,16573193,16569236,16568030,16567351,16566459,16565836,16564918,16564186 Gene ID= ENSG00000219481.10 TPM= 2.26 Transcript Type= NA chr1 16562426 16613591 16562426 16613591 - transcript1307.chr1.nnic@NBPF1 transcript1307.chr1.nnic protein_coding 16613338,16608508,16594931,16594592,16593441,16592159,16591847,16589899,16588849,16587725,16587050,16585489,16583594,16582544,16581420,16580745,16579193,16577317,16576267,16575157,16574487,16573142,16569073,16567979,16567179,16566408,16565633,16564807,16562426 16613591,16608779,16595013,16594661,16593753,16592313,16592056,16590001,16589063,16587797,16587261,16585698,16583696,16582758,16581492,16580956,16579402,16577419,16576481,16575229,16574692,16573193,16569236,16568030,16567351,16566459,16565836,16564918,16564186 Gene ID= ENSG00000219481.10 TPM= 3.17 Transcript Type= NA chr1 16594023 16613591 16594023 16613591 - transcript1349.chr1.nic@NBPF1 transcript1349.chr1.nic protein_coding 16613338,16608508,16594931,16594023 16613591,16608779,16595013,16594661 Gene ID= ENSG00000219481.10 TPM= 1.81 Transcript Type= NA chr1 16595736 16613591 16595736 16613591 - transcript1352.chr1.nnic@NBPF1 transcript1352.chr1.nnic protein_coding 16613338,16608508,16595736 16613591,16608779,16597680 Gene ID= ENSG00000219481.10 TPM= 1.81 Transcript Type= NA chr1 16599596 16613591 16599596 16613591 - transcript1353.chr1.nnic@NBPF1 transcript1353.chr1.nnic protein_coding 16613338,16608508,16599596 16613591,16608779,16601651 Gene ID= ENSG00000219481.10 TPM= 2.72 Transcript Type= NA chr1 16599596 16613304 16599596 16613304 - transcript1357.chr1.nnic@NBPF1 transcript1357.chr1.nnic protein_coding 16613260,16608508,16599596 16613304,16608779,16603324 Gene ID= ENSG00000219481.10 TPM= 6.79 Transcript Type= NA chr1 16599596 16613591 16599596 16613591 - transcript1358.chr1.nnic@NBPF1 transcript1358.chr1.nnic protein_coding 16613338,16608508,16599596 16613591,16608779,16603324 Gene ID= ENSG00000219481.10 TPM= 37.13 Transcript Type= NA chr1 16599589 16613562 16599589 16613562 - ENST00000599069.5@NBPF1 ENST00000599069.5 protein_coding 16613338,16608508,16599589 16613562,16608779,16601843 Gene ID= ENSG00000219481.10 TPM= 4.98 Transcript Type= processed_transcript chr1 16605406 16613534 16605406 16613534 - ENST00000449853.2@NBPF1 ENST00000449853.2 protein_coding 16613338,16608508,16605406 16613534,16608779,16607691 Gene ID= ENSG00000219481.10 TPM= 11.77 Transcript Type= processed_transcript chr1 16618256 16644762 16618256 16644762 - transcript1323.chr1.nnic@CROCCP2 transcript1323.chr1.nnic transcribed_unprocessed_pseudogene 16644646,16643028,16642767,16635027,16633095,16632607,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618256 16644762,16643145,16642850,16635168,16633346,16632769,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620245,16619103 Gene ID= ENSG00000215908.10 TPM= 1.94 Transcript Type= NA chr1 16618258 16644762 16618258 16644762 - transcript1326.chr1.nic@CROCCP2 transcript1326.chr1.nic transcribed_unprocessed_pseudogene 16644646,16643028,16642767,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618258 16644762,16643145,16642850,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620038,16619103 Gene ID= ENSG00000215908.10 TPM= 7.37 Transcript Type= NA chr1 16618258 16644762 16618258 16644762 - transcript1327.chr1.nnic@CROCCP2 transcript1327.chr1.nnic transcribed_unprocessed_pseudogene 16644646,16643028,16635027,16633095,16632607,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618258 16644762,16643145,16635168,16633346,16632769,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620245,16619103 Gene ID= ENSG00000215908.10 TPM= 2.84 Transcript Type= NA chr1 16618258 16644762 16618258 16644762 - transcript1333.chr1.nnic@CROCCP2 transcript1333.chr1.nnic transcribed_unprocessed_pseudogene 16644646,16643028,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618258 16644762,16643145,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620024,16619103 Gene ID= ENSG00000215908.10 TPM= 4.2 Transcript Type= NA chr1 16618259 16644717 16618259 16644717 - transcript1336.chr1.nnic@CROCCP2 transcript1336.chr1.nnic transcribed_unprocessed_pseudogene 16644646,16635027,16633095,16632607,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618259 16644717,16635168,16633346,16632769,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620245,16619103 Gene ID= ENSG00000215908.10 TPM= 1.94 Transcript Type= NA chr1 16618258 16644717 16618258 16644717 - transcript1340.chr1.nnic@CROCCP2 transcript1340.chr1.nnic transcribed_unprocessed_pseudogene 16644646,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16619845,16618258 16644717,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16620024,16619103 Gene ID= ENSG00000215908.10 TPM= 3.3 Transcript Type= NA chr1 16618273 16644686 16618273 16644686 - ENST00000639456.1@CROCCP2 ENST00000639456.1 transcribed_unprocessed_pseudogene 16644646,16643028,16642767,16635027,16633095,16632275,16631530,16630890,16628468,16627145,16626353,16625775,16618273 16644686,16643145,16642850,16635168,16633346,16632371,16631613,16631109,16628650,16627289,16626499,16626005,16619103 Gene ID= ENSG00000215908.10 TPM= 2.72 Transcript Type= processed_transcript chr1 16888542 16889649 16888542 16889649 - ENST00000457075.1@BX284668.5 ENST00000457075.1 lincRNA 16889548,16888542 16889649,16888785 Gene ID= ENSG00000238142.1 TPM= 3.62 Transcript Type= lincRNA chr1 16974502 16980835 16974502 16980835 - ENST00000375535.3@MFAP2 ENST00000375535.3 protein_coding 16980587,16978237,16977109,16976897,16976708,16976501,16975643,16975269,16974502 16980835,16978314,16977198,16976923,16976794,16976545,16975730,16975342,16975023 Gene ID= ENSG00000117122.13 TPM= 1.81 Transcript Type= protein_coding chr1 16985957 17011950 16985957 17011950 - transcript1377.chr1.nic@ATP13A2 transcript1377.chr1.nic protein_coding 17011729,17005684,17005374,17005014,17004692,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985957 17011950,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992342,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358 Gene ID= ENSG00000159363.17 TPM= 5.29 Transcript Type= NA chr1 16985957 17011959 16985957 17011959 - transcript1380.chr1.nic@ATP13A2 transcript1380.chr1.nic protein_coding 17011729,17005684,17005374,17005014,17004692,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985957 17011959,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000507,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358 Gene ID= ENSG00000159363.17 TPM= 7.4 Transcript Type= NA chr1 16985958 17011928 16985958 17011928 - ENST00000452699.5@ATP13A2 ENST00000452699.5 protein_coding 17011729,17005684,17005374,17005014,17004707,17004332,17002296,17002034,17000400,17000246,17000011,16997020,16996386,16996254,16995976,16993629,16992486,16992243,16992009,16991734,16990127,16989887,16989691,16988322,16988138,16987046,16986805,16986463,16985958 17011928,17005778,17005556,17005072,17004821,17004411,17002373,17002103,17000534,17000312,17000142,16997175,16996496,16996300,16996164,16993835,16992581,16992402,16992129,16991858,16990287,16990003,16989770,16988474,16988234,16987269,16986956,16986632,16986358 Gene ID= ENSG00000159363.17 TPM= 142.78 Transcript Type= protein_coding chr1 17018722 17054170 17018722 17054170 - ENST00000375499.7@SDHB ENST00000375499.7 protein_coding 17053948,17044761,17033060,17028600,17027749,17023973,17022608,17018722 17054170,17044888,17033145,17028736,17027865,17024074,17022730,17018958 Gene ID= ENSG00000117118.9 TPM= 112.29 Transcript Type= protein_coding chr1 17406757 17438436 17406757 17438436 - transcript1407.chr1.nnic@RCC2 transcript1407.chr1.nnic protein_coding 17438289,17429106,17425541,17422705,17422203,17420714,17416480,17413537,17413073,17412122,17409974,17406757 17438436,17429199,17425684,17422836,17422291,17420828,17416646,17413717,17413178,17412194,17410051,17409194 Gene ID= ENSG00000179051.13 TPM= 1.81 Transcript Type= NA chr1 17406760 17439724 17406760 17439724 - ENST00000375436.8@RCC2 ENST00000375436.8 protein_coding 17439545,17438230,17429106,17425541,17422705,17422203,17420714,17416480,17413537,17413073,17412122,17409974,17406760 17439724,17438522,17429199,17425684,17422836,17422291,17420828,17416646,17413717,17413178,17412194,17410051,17409194 Gene ID= ENSG00000179051.13 TPM= 37.13 Transcript Type= protein_coding chr1 17539675 17697874 17539675 17697874 + transcript1409.chr1.nnic@ARHGEF10L transcript1409.chr1.nnic protein_coding 17539675,17580553,17587460,17588446,17602127,17603508,17606339,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848 17539950,17580632,17587645,17588479,17602218,17603591,17606436,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697874 Gene ID= ENSG00000074964.16 TPM= 3.6 Transcript Type= NA chr1 17539675 17697874 17539675 17697874 + transcript1413.chr1.nic@ARHGEF10L transcript1413.chr1.nic protein_coding 17539675,17580553,17587460,17588446,17602127,17603508,17607802,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848 17539950,17580632,17587645,17588479,17602218,17603591,17607977,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697874 Gene ID= ENSG00000074964.16 TPM= 41.63 Transcript Type= NA chr1 17539675 17697874 17539675 17697874 + transcript1415.chr1.nnic@ARHGEF10L transcript1415.chr1.nnic protein_coding 17539675,17580553,17587460,17588446,17602127,17603508,17616094,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848 17539950,17580632,17587645,17588479,17602218,17603591,17616202,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697874 Gene ID= ENSG00000074964.16 TPM= 4.5 Transcript Type= NA chr1 17618315 17697874 17618315 17697874 + transcript1418.chr1.nic@ARHGEF10L transcript1418.chr1.nic protein_coding 17618315,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634548,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848 17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17634562,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697874 Gene ID= ENSG00000074964.16 TPM= 3.6 Transcript Type= NA chr1 17618315 17697874 17618315 17697874 + transcript1419.chr1.nnic@ARHGEF10L transcript1419.chr1.nnic protein_coding 17618315,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634835,17637888,17638562,17639238,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848 17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17635016,17638003,17638689,17639981,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697874 Gene ID= ENSG00000074964.16 TPM= 3.05 Transcript Type= NA chr1 17618316 17697868 17618316 17697868 + ENST00000375408.7@ARHGEF10L ENST00000375408.7 protein_coding 17618316,17619339,17621864,17622996,17624387,17625956,17627330,17632321,17634835,17637888,17638562,17640202,17648554,17654636,17655879,17656554,17664447,17687573,17695158,17696848 17618522,17619445,17621941,17623175,17624503,17626048,17627503,17632466,17635016,17638003,17638689,17640302,17648675,17654722,17656102,17656708,17664595,17687747,17695280,17697868 Gene ID= ENSG00000074964.16 TPM= 15.19 Transcript Type= protein_coding chr1 18107746 18378482 18107746 18378482 + ENST00000251296.3@IGSF21 ENST00000251296.3 protein_coding 18107746,18227898,18291866,18334892,18362115,18365223,18376310,18376800,18377393,18378256 18108198,18228010,18291987,18335010,18362230,18365697,18376395,18376992,18377431,18378482 Gene ID= ENSG00000117154.11 TPM= 9.06 Transcript Type= protein_coding chr1 18871432 18902781 18871432 18902781 - ENST00000375341.7@ALDH4A1 ENST00000375341.7 protein_coding 18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18876315,18875382,18874463,18871432 18902781,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18876467,18875503,18874581,18872957 Gene ID= ENSG00000159423.16 TPM= 139.3 Transcript Type= protein_coding chr1 18871432 18902528 18871432 18902528 - ENST00000538839.5@ALDH4A1 ENST00000538839.5 protein_coding 18902462,18890012,18889362,18886464,18885473,18883279,18883124,18881700,18879300,18877416,18877208,18875382,18874463,18871432 18902528,18890105,18889454,18886511,18885628,18883428,18883198,18881887,18879373,18877612,18877255,18875503,18874581,18872957 Gene ID= ENSG00000159423.16 TPM= 5.73 Transcript Type= protein_coding chr1 18904281 18956686 18904281 18956686 - ENST00000455833.6@IFFO2 ENST00000455833.6 protein_coding 18955668,18921061,18919678,18918362,18916903,18911963,18911384,18910342,18904281 18956686,18921121,18919773,18918502,18917042,18912083,18911476,18910472,18908666 Gene ID= ENSG00000169991.10 TPM= 1.81 Transcript Type= protein_coding chr1 19074506 19210276 19074506 19210276 - ENST00000375254.7@UBR4 ENST00000375254.7 protein_coding 19210073,19201718,19199651,19198799,19198541,19197947,19197670,19197141,19193433,19192481,19192188,19187441,19187164,19186540,19185099,19184016,19183811,19179051,19177461,19176592,19174954,19174319,19173439,19173181,19172864,19170762,19169435,19168027,19167022,19165656,19165249,19164799,19164253,19163764,19162420,19161827,19161589,19160917,19160111,19157815,19156767,19156271,19155441,19154918,19153768,19153301,19152313,19151643,19150577,19148563,19147993,19146826,19145793,19144786,19143980,19141647,19141347,19140788,19139083,19138007,19128978,19128211,19127623,19126446,19124541,19122833,19121934,19121189,19120180,19119557,19118872,19117823,19117221,19115398,19114811,19113945,19113699,19112524,19110742,19110380,19110096,19106837,19106569,19105733,19105048,19104585,19104084,19101520,19100376,19099597,19097193,19096523,19095545,19094906,19093949,19093313,19092819,19088759,19087816,19086679,19086145,19084504,19081349,19077976,19076740,19074506 19210276,19201815,19199754,19198928,19198680,19198049,19197811,19197265,19193557,19192540,19192378,19187540,19187301,19186657,19185286,19184175,19183896,19179220,19177743,19176727,19175033,19174447,19173621,19173306,19173093,19170883,19169532,19168184,19167231,19165757,19165349,19164997,19164441,19163827,19162611,19161897,19161736,19161147,19160281,19157997,19156925,19156423,19155668,19155075,19153939,19153502,19152476,19151859,19150793,19148626,19148127,19147000,19145933,19144907,19144091,19141777,19141524,19140892,19139220,19138181,19129074,19128318,19127739,19126655,19124690,19123060,19122012,19121434,19120348,19119701,19118957,19117910,19117414,19115637,19114949,19114070,19113827,19112867,19110832,19110464,19110223,19106966,19106726,19105842,19105189,19104666,19104257,19101641,19100573,19099677,19097280,19096650,19095652,19095025,19094139,19093486,19092918,19088977,19087929,19086821,19086270,19084698,19081573,19078066,19076902,19074896 Gene ID= ENSG00000127481.14 TPM= 8.15 Transcript Type= protein_coding chr1 19215671 19251552 19215671 19251552 - transcript1439.chr1.nic@EMC1 transcript1439.chr1.nic protein_coding 19251415,19244906,19243950,19243614,19242345,19241016,19240297,19239818,19239231,19238795,19238017,19237142,19235130,19232936,19232624,19231261,19230844,19227313,19223396,19222624,19220764,19219569,19215671 19251552,19245030,19244015,19243707,19242473,19241142,19240446,19239985,19239302,19238857,19238139,19237238,19235252,19233135,19232773,19231422,19230963,19227450,19223569,19222834,19220810,19219698,19219482 Gene ID= ENSG00000127463.14 TPM= 3.17 Transcript Type= NA chr1 19215664 19251552 19215664 19251552 - ENST00000477853.5@EMC1 ENST00000477853.5 protein_coding 19251415,19244906,19243950,19243614,19242345,19241016,19240297,19239818,19239231,19238795,19238017,19237142,19235130,19232936,19232624,19231261,19230844,19227313,19223396,19222624,19220764,19219569,19215664 19251552,19245030,19244015,19243707,19242473,19241142,19240446,19239985,19239302,19238857,19238139,19237238,19235252,19233135,19232773,19231422,19230963,19227450,19223569,19222834,19220848,19219698,19219482 Gene ID= ENSG00000127463.14 TPM= 91.01 Transcript Type= protein_coding chr1 19251539 19260128 19251539 19260128 + ENST00000330263.4@MRTO4 ENST00000330263.4 protein_coding 19251539,19254782,19255948,19257064,19257454,19257833,19258477,19258681 19251863,19254840,19256051,19257145,19257521,19257984,19258553,19260128 Gene ID= ENSG00000053372.4 TPM= 52.97 Transcript Type= protein_coding chr1 19251547 19260132 19251547 19260132 + transcript1447.chr1.nic@MRTO4 transcript1447.chr1.nic protein_coding 19251547,19254782,19255948,19257064,19258477,19258681 19251863,19254840,19256051,19257984,19258553,19260132 Gene ID= ENSG00000053372.4 TPM= 3.17 Transcript Type= NA chr1 19303965 19312146 19303965 19312146 - ENST00000235835.7@AKR7A2 ENST00000235835.7 protein_coding 19311827,19308455,19308158,19307314,19307002,19306018,19303965 19312146,19308642,19308262,19307410,19307101,19306147,19304386 Gene ID= ENSG00000053371.12 TPM= 231.82 Transcript Type= protein_coding chr1 19312258 19329301 19312258 19329301 + transcript1454.chr1.nic@PQLC2 transcript1454.chr1.nic protein_coding 19312258,19312729,19317600,19324633,19325526,19326245,19326531,19327227,19328572 19312358,19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329301 Gene ID= ENSG00000040487.12 TPM= 9.89 Transcript Type= NA chr1 19312326 19329300 19312326 19329300 + ENST00000375155.7@PQLC2 ENST00000375155.7 protein_coding 19312326,19312729,19317600,19324633,19325495,19326245,19326531,19327227,19328572 19312358,19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329300 Gene ID= ENSG00000040487.12 TPM= 28 Transcript Type= protein_coding chr1 19312328 19329280 19312328 19329280 + ENST00000375153.7@PQLC2 ENST00000375153.7 protein_coding 19312328,19317600,19324633,19325495,19326245,19326531,19327227,19328572 19312889,19317841,19324762,19325582,19326387,19326623,19327412,19329280 Gene ID= ENSG00000040487.12 TPM= 18.79 Transcript Type= protein_coding chr1 19312341 19329300 19312341 19329300 + ENST00000400548.6@PQLC2 ENST00000400548.6 protein_coding 19312341,19312729,19324633,19325495,19326245,19326531,19327227,19328572 19312358,19312889,19324762,19325582,19326387,19326623,19327412,19329300 Gene ID= ENSG00000040487.12 TPM= 3.1 Transcript Type= protein_coding chr1 19338779 19419751 19338779 19419751 - ENST00000375144.5@CAPZB ENST00000375144.5 protein_coding 19419661,19385505,19378540,19357422,19356635,19345187,19344358,19338779 19419751,19385626,19378653,19357563,19356751,19345252,19344434,19339617 Gene ID= ENSG00000077549.17 TPM= 31.69 Transcript Type= protein_coding chr1 19374175 19485488 19374175 19485488 - ENST00000482808.1@CAPZB ENST00000482808.1 protein_coding 19485436,19419661,19385505,19378540,19374175 19485488,19419750,19385626,19378653,19374455 Gene ID= ENSG00000077549.17 TPM= 11.77 Transcript Type= processed_transcript chr1 19596977 19629821 19596977 19629821 + ENST00000617872.4@MINOS1 ENST00000617872.4 protein_coding 19596977,19623474,19626387 19597109,19623583,19629821 Gene ID= ENSG00000173436.13 TPM= 5.43 Transcript Type= protein_coding chr1 19597001 19626623 19597001 19626623 + ENST00000467029.5@MINOS1 ENST00000467029.5 protein_coding 19597001,19617258,19622100,19623474,19626387 19597109,19617336,19622147,19623583,19626623 Gene ID= ENSG00000173436.13 TPM= 7.24 Transcript Type= processed_transcript chr1 19644163 19658452 19644163 19658452 + ENST00000375136.7@NBL1 ENST00000375136.7 protein_coding 19644163,19655012,19655324,19656866 19644446,19655200,19655435,19658452 Gene ID= ENSG00000158747.13 TPM= 73.35 Transcript Type= protein_coding chr1 19682212 19799920 19682212 19799920 - transcript1505.chr1.nnic@TMCO4 transcript1505.chr1.nnic protein_coding 19799855,19799174,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682212 19799920,19799349,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444 Gene ID= ENSG00000162542.13 TPM= 5.61 Transcript Type= NA chr1 19682212 19800037 19682212 19800037 - transcript1513.chr1.nic@TMCO4 transcript1513.chr1.nic protein_coding 19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682212 19800037,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444 Gene ID= ENSG00000162542.13 TPM= 28.25 Transcript Type= NA chr1 19682212 19799915 19682212 19799915 - transcript1517.chr1.nic@TMCO4 transcript1517.chr1.nic protein_coding 19799855,19798137,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19740777,19739824,19737372,19700768,19694434,19682212 19799915,19798215,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19740941,19739960,19737456,19700885,19694551,19683444 Gene ID= ENSG00000162542.13 TPM= 5.8 Transcript Type= NA chr1 19682212 19799931 19682212 19799931 - transcript1518.chr1.nnic@TMCO4 transcript1518.chr1.nnic protein_coding 19799855,19799174,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19740777,19739824,19737372,19700768,19694434,19682212 19799931,19799349,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19740941,19739960,19737456,19700885,19694551,19683444 Gene ID= ENSG00000162542.13 TPM= 3.08 Transcript Type= NA chr1 19682212 19800037 19682212 19800037 - transcript1523.chr1.nic@TMCO4 transcript1523.chr1.nic protein_coding 19799855,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19740777,19739824,19737372,19700768,19694434,19682212 19800037,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19740941,19739960,19737456,19700885,19694551,19683444 Gene ID= ENSG00000162542.13 TPM= 8.51 Transcript Type= NA chr1 19682213 19799917 19682213 19799917 - ENST00000294543.10@TMCO4 ENST00000294543.10 protein_coding 19799855,19798137,19787026,19780580,19771308,19770542,19755634,19747163,19746456,19745532,19740777,19739824,19737372,19700768,19694434,19682213 19799917,19798215,19787117,19780766,19771482,19770569,19755766,19747260,19746599,19745651,19740941,19739960,19737456,19700885,19694551,19683444 Gene ID= ENSG00000162542.13 TPM= 12.86 Transcript Type= protein_coding chr1 20184242 20186486 20184242 20186486 - ENST00000442226.1@UBXN10-AS1 ENST00000442226.1 antisense_RNA 20186360,20184242 20186486,20184624 Gene ID= ENSG00000225986.1 TPM= 1.81 Transcript Type= antisense_RNA chr1 20186085 20196048 20186085 20196048 + ENST00000375099.3@UBXN10 ENST00000375099.3 protein_coding 20186085,20190547 20186153,20196048 Gene ID= ENSG00000162543.5 TPM= 1.81 Transcript Type= protein_coding chr1 20375720 20382129 20375720 20382129 - transcript1529.chr1.nnic@LINC01141 transcript1529.chr1.nnic lincRNA 20380578,20380245,20375720 20382129,20380415,20375932 Gene ID= ENSG00000236963.6 TPM= 1.81 Transcript Type= NA chr1 20482391 20486220 20482391 20486220 - ENST00000375078.3@CAMK2N1 ENST00000375078.3 protein_coding 20485214,20482391 20486220,20483719 Gene ID= ENSG00000162545.5 TPM= 46.18 Transcript Type= protein_coding chr1 20499448 20508161 20499448 20508161 - ENST00000264198.4@MUL1 ENST00000264198.4 protein_coding 20507905,20503222,20502069,20499448 20508161,20503309,20502189,20501419 Gene ID= ENSG00000090432.6 TPM= 85.12 Transcript Type= protein_coding chr1 20554561 20556150 20554561 20556150 + transcript1540.chr1.nnic@FAM43B transcript1540.chr1.nnic protein_coding 20554561,20555010,20555902 20554753,20555090,20556150 Gene ID= ENSG00000183114.7 TPM= 1.81 Transcript Type= NA chr1 20588948 20618908 20588948 20618908 + ENST00000375071.3@CDA ENST00000375071.3 protein_coding 20588948,20604928,20613842,20618452 20589283,20605039,20613899,20618908 Gene ID= ENSG00000158825.5 TPM= 2.72 Transcript Type= protein_coding chr1 20633455 20651511 20633455 20651511 + ENST00000321556.4@PINK1 ENST00000321556.4 protein_coding 20633455,20637842,20639892,20644490,20645560,20648505,20648995,20650434 20633935,20638129,20639992,20644672,20645723,20648632,20649231,20651511 Gene ID= ENSG00000158828.7 TPM= 1439 Transcript Type= protein_coding chr1 20664016 20685339 20664016 20685339 - transcript1575.chr1.nic@KIF17 transcript1575.chr1.nic protein_coding 20685252,20684809,20682653,20671938,20670421,20666214,20664016 20685339,20685020,20682884,20672196,20670488,20666331,20664762 Gene ID= ENSG00000117245.12 TPM= 15.1 Transcript Type= NA chr1 20664014 20685187 20664014 20685187 - ENST00000477167.5@KIF17 ENST00000477167.5 protein_coding 20684809,20682653,20671938,20670421,20666214,20664014 20685187,20682884,20672196,20670488,20666331,20664762 Gene ID= ENSG00000117245.12 TPM= 7.85 Transcript Type= processed_transcript chr1 20742424 20786660 20742424 20786660 - transcript1595.chr1.nic@HP1BP3 transcript1595.chr1.nic protein_coding 20786514,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742424 20786660,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091 Gene ID= ENSG00000127483.17 TPM= 11.08 Transcript Type= NA chr1 20742424 20787347 20742424 20787347 - transcript1597.chr1.nic@HP1BP3 transcript1597.chr1.nic protein_coding 20787195,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742424 20787347,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091 Gene ID= ENSG00000127483.17 TPM= 80.2 Transcript Type= NA chr1 20742424 20787335 20742424 20787335 - transcript1605.chr1.nic@HP1BP3 transcript1605.chr1.nic protein_coding 20787195,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742424 20787335,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091 Gene ID= ENSG00000127483.17 TPM= 88.06 Transcript Type= NA chr1 20742661 20786688 20742661 20786688 - ENST00000312239.9@HP1BP3 ENST00000312239.9 protein_coding 20786649,20780345,20779812,20776597,20773451,20770930,20767584,20765377,20757166,20749723,20747544,20745543,20742661 20786688,20780540,20779911,20776750,20773610,20771073,20767664,20765531,20757256,20749882,20747655,20745656,20745091 Gene ID= ENSG00000127483.17 TPM= 10.93 Transcript Type= protein_coding chr1 20806483 21176850 20806483 21176850 - ENST00000602326.5@EIF4G3 ENST00000602326.5 protein_coding 21176722,21176175,21089138,21050866,21002713,20982388,20981048,20980334,20973002,20969474,20950003,20941491,20904883,20899697,20895368,20893517,20886201,20879323,20865116,20864476,20862228,20860385,20857403,20854978,20853560,20851258,20849415,20840856,20829147,20827617,20825100,20817392,20813158,20810738,20806483 21176850,21176358,21089213,21050994,21002808,20982408,20981227,20980448,20973099,20969596,20950108,20942330,20904971,20899943,20895501,20893636,20886371,20879520,20865262,20864712,20862332,20860517,20857497,20855071,20853677,20851478,20849530,20841028,20829272,20827698,20825198,20817538,20813239,20810884,20807500 Gene ID= ENSG00000075151.20 TPM= 9.96 Transcript Type= protein_coding chr1 21217247 21345920 21217247 21345920 - transcript1615.chr1.nnic@ECE1 transcript1615.chr1.nnic protein_coding 21345376,21290070,21279191,21272699,21260271,21258693,21257525,21255947,21247221,21244989,21238134,21236746,21235850,21233558,21227931,21227159,21225250,21221747,21219959,21217247 21345920,21290156,21279332,21272911,21260392,21258839,21257590,21256138,21247363,21245103,21238244,21236844,21235927,21233661,21228041,21227226,21225440,21221842,21220131,21217978 Gene ID= ENSG00000117298.14 TPM= 7.85 Transcript Type= NA chr1 21217247 21345504 21217247 21345504 - ENST00000415912.6@ECE1 ENST00000415912.6 protein_coding 21345376,21290070,21279191,21272699,21260271,21258693,21257525,21255947,21247221,21244989,21238134,21236746,21235850,21233558,21227931,21227159,21225250,21221747,21217247 21345504,21290156,21279332,21272911,21260392,21258839,21257590,21256138,21247363,21245103,21238244,21236844,21235927,21233661,21228041,21227226,21225440,21221842,21220131 Gene ID= ENSG00000117298.14 TPM= 342.3 Transcript Type= protein_coding chr1 21439864 21484899 21439864 21484899 + transcript1636.chr1.nnic@NBPF3 transcript1636.chr1.nnic protein_coding 21439864,21444948,21465735,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143,21484370 21440348,21445219,21465817,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21483308,21484899 Gene ID= ENSG00000142794.18 TPM= 1.81 Transcript Type= NA chr1 21440134 21484901 21440134 21484901 + transcript1638.chr1.nnic@NBPF3 transcript1638.chr1.nnic protein_coding 21440134,21444948,21453373,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143 21440348,21445219,21453430,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21484901 Gene ID= ENSG00000142794.18 TPM= 1.99 Transcript Type= NA chr1 21440119 21484901 21440119 21484901 + transcript1639.chr1.nnic@NBPF3 transcript1639.chr1.nnic protein_coding 21440119,21444948,21465735,21466087,21466996,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143 21440348,21445219,21465817,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21484901 Gene ID= ENSG00000142794.18 TPM= 2.9 Transcript Type= NA chr1 21440086 21484901 21440086 21484901 + transcript1641.chr1.nnic@NBPF3 transcript1641.chr1.nnic protein_coding 21440086,21444948,21465735,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143 21440348,21445219,21465817,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21484901 Gene ID= ENSG00000142794.18 TPM= 5.61 Transcript Type= NA chr1 21440123 21484901 21440123 21484901 + transcript1647.chr1.nnic@NBPF3 transcript1647.chr1.nnic protein_coding 21440123,21444948,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143 21440348,21445219,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480169,21480981,21481769,21482535,21484901 Gene ID= ENSG00000142794.18 TPM= 1.99 Transcript Type= NA chr1 21440087 21484901 21440087 21484901 + transcript1648.chr1.nic@NBPF3 transcript1648.chr1.nic protein_coding 21440087,21444948,21466087,21467182,21468441,21468688,21470632,21471569,21472843,21473380,21474900,21478144,21479349,21480051,21480930,21481597,21482484,21483143 21440348,21445219,21466156,21467309,21468585,21468897,21470734,21471783,21472915,21473585,21474951,21478307,21479400,21480223,21480981,21481769,21482535,21484901 Gene ID= ENSG00000142794.18 TPM= 4.71 Transcript Type= NA chr1 21508656 21578412 21508656 21578412 + transcript1654.chr1.nnic@ALPL transcript1654.chr1.nnic protein_coding 21508656,21553978,21560626,21561097,21563110,21564041,21568104,21570305,21573665,21575733,21576522,21577383 21509111,21554142,21560745,21561212,21563284,21564216,21568247,21570374,21573799,21575924,21576641,21578412 Gene ID= ENSG00000162551.13 TPM= 22.64 Transcript Type= NA chr1 21509372 21578412 21509372 21578412 + ENST00000374840.7@ALPL ENST00000374840.7 protein_coding 21509372,21553978,21560626,21561097,21563110,21564041,21568104,21570305,21573665,21575733,21576522,21577383 21509517,21554142,21560745,21561212,21563284,21564216,21568247,21570374,21573799,21575924,21576641,21578412 Gene ID= ENSG00000162551.13 TPM= 163.9 Transcript Type= protein_coding chr1 21596216 21669420 21596216 21669420 - transcript1689.chr1.nic@RAP1GAP transcript1689.chr1.nic protein_coding 21669254,21649761,21626304,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21602804,21601684,21599494,21598400,21597961,21597686,21596216 21669420,21649796,21626397,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21602913,21601797,21599617,21598502,21598095,21597728,21597264 Gene ID= ENSG00000076864.19 TPM= 9.24 Transcript Type= NA chr1 21596221 21622568 21596221 21622568 - ENST00000374761.6@RAP1GAP ENST00000374761.6 protein_coding 21622339,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21602804,21601684,21599494,21598400,21597961,21597686,21596221 21622568,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21602913,21601797,21599617,21598502,21598064,21597728,21597264 Gene ID= ENSG00000076864.19 TPM= 22.18 Transcript Type= protein_coding chr1 21596221 21669306 21596221 21669306 - ENST00000374765.8@RAP1GAP ENST00000374765.8 protein_coding 21669254,21649761,21626304,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21602804,21601684,21599494,21598400,21597961,21597686,21596221 21669306,21649796,21626397,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21602913,21601797,21599617,21598502,21598064,21597728,21597264 Gene ID= ENSG00000076864.19 TPM= 58.4 Transcript Type= protein_coding chr1 21596215 21669363 21596215 21669363 - ENST00000290101.8@RAP1GAP ENST00000290101.8 protein_coding 21669254,21649761,21626304,21620015,21619025,21617934,21617306,21613986,21613628,21613176,21612026,21611716,21611452,21610120,21609575,21608850,21608213,21606066,21603658,21602804,21601684,21599581,21599494,21598400,21597961,21597686,21596215 21669363,21649796,21626397,21620050,21619072,21617972,21617491,21614089,21613706,21613229,21612109,21611816,21611581,21610275,21609646,21608936,21608350,21606197,21603912,21602913,21601797,21599617,21599575,21598502,21598064,21597728,21597264 Gene ID= ENSG00000076864.19 TPM= 1.22 Transcript Type= protein_coding chr1 21678579 21783606 21678579 21783606 - ENST00000308271.13@USP48 ENST00000308271.13 protein_coding 21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728570,21723898,21721650,21721036,21715389,21706744,21706467,21706126,21705727,21704262,21703512,21701498,21695066,21689974,21687191,21680808,21678579 21783606,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21724095,21721764,21721166,21715457,21706868,21706589,21706187,21705837,21704392,21703618,21701602,21695221,21690099,21687239,21680834,21679439 Gene ID= ENSG00000090686.15 TPM= 49.8 Transcript Type= protein_coding chr1 21678902 21783217 21678902 21783217 - transcript1715.chr1.nnic@USP48 transcript1715.chr1.nnic protein_coding 21782824,21757663,21756546,21752992,21752527,21751507,21748138,21747067,21736446,21729704,21728570,21721650,21721036,21715389,21706744,21706467,21706126,21705727,21704262,21703512,21701498,21695066,21689974,21687191,21680808,21678902 21783217,21757783,21756702,21753119,21752651,21751615,21748271,21747149,21736625,21729832,21728719,21721764,21721166,21715457,21706868,21706589,21706187,21705837,21704392,21703618,21701602,21695221,21690099,21687239,21680834,21679439 Gene ID= ENSG00000090686.15 TPM= 5.43 Transcript Type= NA chr1 21822245 21937297 21822245 21937297 - ENST00000374695.7@HSPG2 ENST00000374695.7 protein_coding 21937155,21896175,21895922,21890585,21890427,21889981,21887938,21887420,21887215,21885320,21885013,21884767,21884528,21881339,21880656,21880363,21880107,21878994,21878577,21878433,21878186,21876512,21876229,21875863,21875629,21874891,21874616,21874406,21873925,21873375,21872997,21872620,21872186,21865717,21865285,21864843,21864100,21861988,21861757,21860177,21859835,21859566,21857285,21857015,21855787,21855523,21855304,21854848,21854611,21854193,21852919,21852700,21852088,21851791,21851546,21850363,21850041,21848893,21848643,21847958,21847689,21847354,21846448,21846108,21844148,21843297,21842770,21842239,21842002,21841539,21841101,21839822,21839371,21838825,21836802,21835540,21834679,21833816,21833467,21833268,21832495,21831652,21831463,21831215,21830982,21829993,21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245 21937297,21896310,21895966,21890694,21890485,21890141,21888066,21887674,21887334,21885451,21885157,21884918,21884674,21881502,21880835,21880559,21880254,21879121,21878663,21878491,21878253,21876652,21876405,21876042,21875747,21875002,21874729,21874533,21874011,21873424,21873091,21872760,21872377,21865809,21865365,21865073,21864213,21862115,21861843,21860235,21860002,21859676,21857385,21857195,21855912,21855675,21855446,21854983,21854765,21854343,21853070,21852832,21852233,21851926,21851697,21850498,21850192,21849031,21848794,21848093,21847840,21847492,21846599,21846255,21844299,21843438,21842921,21842380,21842142,21841673,21841285,21840017,21839550,21839085,21837006,21835637,21834945,21833925,21833614,21833384,21832606,21831796,21831562,21831324,21831090,21830091,21829604,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488 Gene ID= ENSG00000142798.17 TPM= 58.41 Transcript Type= protein_coding chr1 21822245 21830713 21822245 21830713 - ENST00000486901.1@HSPG2 ENST00000486901.1 protein_coding 21829383,21828835,21828255,21828030,21827863,21824704,21824537,21824306,21824121,21823616,21822245 21830713,21829079,21828426,21828152,21827919,21824779,21824615,21824376,21824204,21823719,21823488 Gene ID= ENSG00000142798.17 TPM= 26.71 Transcript Type= retained_intron chr1 21877516 21937306 21877516 21937306 - transcript1736.chr1.nic@HSPG2 transcript1736.chr1.nic protein_coding 21937155,21896175,21895922,21890585,21890427,21889981,21887938,21887420,21887215,21885320,21885013,21884767,21884528,21881339,21880656,21880363,21880107,21878994,21878577,21878433,21878186,21877516 21937306,21896310,21895966,21890694,21890485,21890141,21888066,21887674,21887334,21885451,21885157,21884918,21884674,21881502,21880835,21880559,21880254,21879121,21878663,21878491,21878253,21877539 Gene ID= ENSG00000142798.17 TPM= 2.72 Transcript Type= NA chr1 22025511 22031223 22025511 22031223 + ENST00000416769.2@LINC00339 ENST00000416769.2 transcribed_processed_pseudogene 22025511,22030280 22025643,22031223 Gene ID= ENSG00000218510.7 TPM= 17.21 Transcript Type= processed_transcript chr1 22052668 22092946 22052668 22092946 + ENST00000344548.7@CDC42 ENST00000344548.7 protein_coding 22052668,22074094,22078429,22081722,22086439,22086669,22091428 22052742,22074219,22078583,22081794,22086548,22086866,22092946 Gene ID= ENSG00000070831.15 TPM= 209.63 Transcript Type= protein_coding chr1 22052666 22092949 22052666 22092949 + transcript1744.chr1.nic@CDC42 transcript1744.chr1.nic protein_coding 22052666,22078429,22081722,22086439,22086669,22091428 22052742,22078583,22081794,22086548,22086866,22092949 Gene ID= ENSG00000070831.15 TPM= 225.03 Transcript Type= NA chr1 22117305 22142966 22117305 22142966 - ENST00000290167.10@WNT4 ENST00000290167.10 protein_coding 22142846,22129616,22121445,22121211,22117305 22142966,22129851,22121576,22121353,22120517 Gene ID= ENSG00000162552.14 TPM= 1.81 Transcript Type= protein_coding chr1 22451851 22531157 22451851 22531157 + ENST00000404138.5@ZBTB40 ENST00000404138.5 protein_coding 22451851,22452659,22489880,22491400,22501492,22502299,22506049,22508001,22508530,22509100,22511179,22511676,22512924,22517300,22520061,22521496,22522377,22524218,22526202 22452004,22452946,22490645,22491533,22501684,22502441,22506241,22508137,22508731,22509233,22511347,22512134,22513130,22517464,22520275,22521658,22522463,22524444,22531157 Gene ID= ENSG00000184677.16 TPM= 6.95 Transcript Type= protein_coding chr1 22456567 22530699 22456567 22530699 + transcript1754.chr1.nnic@ZBTB40 transcript1754.chr1.nnic protein_coding 22456567,22489880,22491400,22501492,22502299,22506049,22508001,22508530,22509100,22511179,22511676,22512924,22517300,22520061,22521496,22522377,22524218,22526202 22456640,22490645,22491533,22501684,22502441,22506241,22508137,22508731,22509233,22511347,22512134,22513130,22517464,22520275,22521658,22522463,22524444,22530699 Gene ID= ENSG00000184677.16 TPM= 7.85 Transcript Type= NA chr1 22451851 22531157 22451851 22531157 + ENST00000374651.8@ZBTB40 ENST00000374651.8 protein_coding 22451851,22489880,22491400,22506049,22508001,22508530,22509100,22511179,22511676,22512924,22517300,22520061,22521496,22522377,22524218,22526202 22452004,22490645,22491533,22506241,22508137,22508731,22509233,22511347,22512134,22513130,22517464,22520275,22521658,22522463,22524444,22531157 Gene ID= ENSG00000184677.16 TPM= 6.95 Transcript Type= protein_coding chr1 22636506 22639608 22636506 22639608 + ENST00000374642.7@C1QA ENST00000374642.7 protein_coding 22636506,22637610,22638833 22636702,22637779,22639608 Gene ID= ENSG00000173372.16 TPM= 509.37 Transcript Type= protein_coding chr1 22643630 22648110 22643630 22648110 + ENST00000374640.8@C1QC ENST00000374640.8 protein_coding 22643630,22644011,22647227 22643714,22644204,22648110 Gene ID= ENSG00000159189.11 TPM= 559.63 Transcript Type= protein_coding chr1 22643633 22648110 22643633 22648110 + ENST00000374639.7@C1QC ENST00000374639.7 protein_coding 22643633,22644011,22647227 22643737,22644204,22648110 Gene ID= ENSG00000159189.11 TPM= 60.67 Transcript Type= protein_coding chr1 22652981 22661538 22652981 22661538 + ENST00000509305.5@C1QB ENST00000509305.5 protein_coding 22652981,22659440,22660812 22653303,22659643,22661538 Gene ID= ENSG00000173369.15 TPM= 491.56 Transcript Type= protein_coding chr1 22774438 22915329 22774438 22915329 + transcript1784.chr1.nnic@EPHB2 transcript1784.chr1.nnic protein_coding 22774438,22781421,22784392,22863037,22864877,22882359,22892884,22895472,22896414,22905987,22906710,22907953,22909022,22910382,22912444,22913462 22774639,22781485,22785076,22863192,22865212,22882483,22893046,22895580,22896478,22906109,22906957,22908168,22909171,22910575,22912599,22915329 Gene ID= ENSG00000133216.16 TPM= 8.15 Transcript Type= NA chr1 23019448 23083689 23019448 23083689 + ENST00000356634.7@KDM1A ENST00000356634.7 protein_coding 23019448,23030469,23050387,23053761,23055069,23055932,23057484,23059073,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179 23019947,23030634,23050520,23053839,23055161,23056038,23057565,23059167,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083689 Gene ID= ENSG00000004487.15 TPM= 101.99 Transcript Type= protein_coding chr1 23019493 23083688 23019493 23083688 + ENST00000400181.8@KDM1A ENST00000400181.8 protein_coding 23019493,23030469,23044427,23050387,23053761,23055069,23055932,23057484,23059073,23066060,23068539,23069061,23071225,23072124,23073292,23077228,23078990,23079553,23081446,23082220,23083179 23019947,23030634,23044486,23050520,23053839,23055161,23056038,23057565,23059167,23066071,23068681,23069151,23071359,23072197,23073403,23077360,23079177,23079667,23081573,23082366,23083688 Gene ID= ENSG00000004487.15 TPM= 122.82 Transcript Type= protein_coding chr1 23309786 23344322 23309786 23344322 - ENST00000374612.5@HNRNPR ENST00000374612.5 protein_coding 23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309786 23344322,23341020,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066 Gene ID= ENSG00000125944.19 TPM= 73.8 Transcript Type= protein_coding chr1 23309788 23344262 23309788 23344262 - ENST00000302271.10@HNRNPR ENST00000302271.10 protein_coding 23344211,23340852,23338490,23337754,23333518,23323556,23321528,23318483,23313553,23311201,23309788 23344262,23341017,23338608,23337861,23333631,23323732,23321663,23318688,23313702,23311322,23311066 Gene ID= ENSG00000125944.19 TPM= 4.98 Transcript Type= protein_coding chr1 23359449 23369804 23359449 23369804 - transcript1826.chr1.nnic@ZNF436 transcript1826.chr1.nnic protein_coding 23369366,23367042,23359449 23369804,23367168,23363221 Gene ID= ENSG00000125945.14 TPM= 3.02 Transcript Type= NA chr1 23359448 23369442 23359448 23369442 - ENST00000314011.8@ZNF436 ENST00000314011.8 protein_coding 23369366,23367973,23367042,23359448 23369442,23368065,23367168,23363221 Gene ID= ENSG00000125945.14 TPM= 3.92 Transcript Type= protein_coding chr1 23359975 23368386 23359975 23368386 - ENST00000374608.3@ZNF436 ENST00000374608.3 protein_coding 23367973,23367042,23359975 23368386,23367168,23363221 Gene ID= ENSG00000125945.14 TPM= 6.64 Transcript Type= protein_coding chr1 23369191 23371784 23369191 23371784 + transcript1829.chr1.nic@ZNF436-AS1 transcript1829.chr1.nic antisense_RNA 23369191,23371139,23371513 23369324,23371209,23371784 Gene ID= ENSG00000249087.6 TPM= 1.81 Transcript Type= NA chr1 23381950 23424779 23381950 23424779 - transcript1841.chr1.nic@TCEA3 transcript1841.chr1.nic protein_coding 23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381950 23424779,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23384068 Gene ID= ENSG00000204219.9 TPM= 10.87 Transcript Type= NA chr1 23381061 23424740 23381061 23424740 - ENST00000450454.6@TCEA3 ENST00000450454.6 protein_coding 23424565,23419077,23417904,23417249,23408664,23397792,23397545,23393879,23387273,23384346,23381061 23424740,23419139,23418009,23417390,23408726,23397955,23397601,23394033,23387419,23384417,23381474 Gene ID= ENSG00000204219.9 TPM= 189.26 Transcript Type= protein_coding chr1 23428564 23484219 23428564 23484219 - transcript1852.chr1.nic@ASAP3 transcript1852.chr1.nic protein_coding 23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433362,23433077,23431696,23431035,23428564 23484219,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930 Gene ID= ENSG00000088280.18 TPM= 6.58 Transcript Type= NA chr1 23428564 23484244 23428564 23484244 - transcript1862.chr1.nic@ASAP3 transcript1862.chr1.nic protein_coding 23484036,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428564 23484244,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930 Gene ID= ENSG00000088280.18 TPM= 6.73 Transcript Type= NA chr1 23428563 23484178 23428563 23484178 - ENST00000336689.7@ASAP3 ENST00000336689.7 protein_coding 23484005,23456122,23455881,23452697,23451479,23442501,23442186,23441655,23441387,23441102,23439161,23438747,23437424,23437130,23436911,23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563 23484178,23456194,23456026,23452771,23451528,23442612,23442271,23441730,23441473,23441211,23439230,23438834,23437472,23437320,23437044,23436654,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930 Gene ID= ENSG00000088280.18 TPM= 81.89 Transcript Type= protein_coding chr1 23428563 23436677 23428563 23436677 - ENST00000495646.5@ASAP3 ENST00000495646.5 protein_coding 23436560,23435851,23434533,23434254,23433626,23433425,23433077,23431696,23431035,23428563 23436677,23436028,23434618,23434369,23433693,23433532,23433272,23431918,23431125,23429930 Gene ID= ENSG00000088280.18 TPM= 4.92 Transcript Type= protein_coding chr1 23557918 23559794 23557918 23559794 - ENST00000374561.5@ID3 ENST00000374561.5 protein_coding 23559127,23558935,23557918 23559794,23559019,23558415 Gene ID= ENSG00000117318.8 TPM= 183.83 Transcript Type= protein_coding chr1 23557934 23559075 23557934 23559075 - ENST00000463312.1@ID3 ENST00000463312.1 protein_coding 23558935,23557934 23559075,23558415 Gene ID= ENSG00000117318.8 TPM= 3.62 Transcript Type= processed_transcript chr1 23691779 23696425 23691779 23696425 + ENST00000374550.7@RPL11 ENST00000374550.7 protein_coding 23691779,23692609,23693807,23694660,23695798,23696344 23691829,23692759,23693913,23694791,23695908,23696425 Gene ID= ENSG00000142676.12 TPM= 550.57 Transcript Type= protein_coding chr1 23743155 23762059 23743155 23762059 + ENST00000418390.6@ELOA ENST00000418390.6 protein_coding 23743155,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512 23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23762059 Gene ID= ENSG00000011007.12 TPM= 57.5 Transcript Type= protein_coding chr1 23743472 23759893 23743472 23759893 + ENST00000609199.1@ELOA ENST00000609199.1 protein_coding 23743472,23749021,23749842,23750845,23752407,23754100,23754363,23755843,23756274,23756953,23759512 23743578,23749077,23749948,23752030,23752518,23754255,23754460,23756023,23756385,23757125,23759893 Gene ID= ENSG00000011007.12 TPM= 9.51 Transcript Type= protein_coding chr1 23778352 23788230 23778352 23788230 + transcript1887.chr1.nnic@PITHD1 transcript1887.chr1.nnic protein_coding 23778352,23779864,23785675,23786315,23787275 23778713,23779941,23785779,23786423,23788230 Gene ID= ENSG00000057757.9 TPM= 11.32 Transcript Type= NA chr1 23778405 23788232 23778405 23788232 + ENST00000246151.8@PITHD1 ENST00000246151.8 protein_coding 23778405,23779438,23779864,23785675,23786315,23787275 23778713,23779481,23779941,23785779,23786423,23788232 Gene ID= ENSG00000057757.9 TPM= 80.14 Transcript Type= protein_coding chr1 23791181 23795544 23791181 23795544 + transcript1889.chr1.nnic@LYPLA2 transcript1889.chr1.nnic protein_coding 23791181,23792657,23793008,23793151,23793674,23793860,23794063,23794224,23794427,23794682 23791250,23792760,23793039,23793220,23793752,23793930,23794136,23794325,23794600,23795544 Gene ID= ENSG00000011009.10 TPM= 5.89 Transcript Type= NA chr1 23795598 23800583 23795598 23800583 - transcript1896.chr1.nic@GALE transcript1896.chr1.nic protein_coding 23800308,23799366,23798887,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795598 23800583,23799436,23799012,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007 Gene ID= ENSG00000117308.14 TPM= 2.87 Transcript Type= NA chr1 23795599 23800804 23795599 23800804 - ENST00000617979.4@GALE ENST00000617979.4 protein_coding 23800712,23799366,23798887,23798615,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795599 23800804,23799436,23799012,23798730,23798230,23797871,23797147,23796942,23796782,23796586,23796265,23796007 Gene ID= ENSG00000117308.14 TPM= 23.7 Transcript Type= protein_coding chr1 23795598 23800753 23795598 23800753 - transcript1900.chr1.nic@GALE transcript1900.chr1.nic protein_coding 23800712,23799366,23798887,23798117,23797695,23797034,23796876,23796697,23796509,23796151,23795598 23800753,23799436,23799012,23798730,23797871,23797147,23796942,23796782,23796586,23796265,23796007 Gene ID= ENSG00000117308.14 TPM= 2.42 Transcript Type= NA chr1 23801885 23825459 23801885 23825459 - ENST00000374490.7@HMGCL ENST00000374490.7 protein_coding 23825356,23820510,23817476,23816675,23814190,23810736,23808135,23804400,23801885 23825459,23820593,23817583,23816770,23814338,23810799,23808323,23804525,23802564 Gene ID= ENSG00000117305.14 TPM= 213.1 Transcript Type= protein_coding chr1 23801887 23825428 23801887 23825428 - ENST00000436439.6@HMGCL ENST00000436439.6 protein_coding 23825356,23820510,23817476,23816675,23808135,23804400,23801887 23825428,23820593,23817583,23816770,23808323,23804525,23802564 Gene ID= ENSG00000117305.14 TPM= 3.92 Transcript Type= protein_coding chr1 23845077 23868294 23845077 23868294 - ENST00000374479.3@FUCA1 ENST00000374479.3 protein_coding 23867898,23865491,23863134,23859798,23854360,23848649,23846074,23845077 23868294,23865625,23863271,23859903,23854560,23848839,23846173,23845855 Gene ID= ENSG00000179163.11 TPM= 215.52 Transcript Type= protein_coding chr1 23959812 23963462 23959812 23963462 + ENST00000334351.7@PNRC2 ENST00000334351.7 protein_coding 23959812,23960929,23961440 23959998,23961134,23963462 Gene ID= ENSG00000189266.11 TPM= 161.19 Transcript Type= protein_coding chr1 23966449 23980362 23966449 23980362 - transcript1919.chr1.nic@SRSF10 transcript1919.chr1.nic protein_coding 23980191,23978653,23977911,23974974,23971850,23971573,23966449 23980362,23978817,23978273,23975080,23972012,23971626,23967723 Gene ID= ENSG00000188529.14 TPM= 3.62 Transcript Type= NA chr1 23967823 23980367 23967823 23980367 - transcript1923.chr1.nic@SRSF10 transcript1923.chr1.nic protein_coding 23980191,23978653,23977911,23974974,23971850,23971573,23967823 23980367,23978817,23978273,23975080,23972012,23971626,23971439 Gene ID= ENSG00000188529.14 TPM= 4.53 Transcript Type= NA chr1 23966445 23980296 23966445 23980296 - ENST00000453840.7@SRSF10 ENST00000453840.7 protein_coding 23980191,23978713,23974974,23971850,23971573,23966445 23980296,23978817,23975077,23972012,23971623,23967723 Gene ID= ENSG00000188529.14 TPM= 3.62 Transcript Type= protein_coding chr1 24154155 24187270 24154155 24187270 - transcript1937.chr1.nnic@IFNLR1 transcript1937.chr1.nnic protein_coding 24187191,24169417,24161542,24159474,24159052,24154155 24187270,24169601,24161684,24159633,24159182,24157891 Gene ID= ENSG00000185436.11 TPM= 1.81 Transcript Type= NA chr1 24154157 24187261 24154157 24187261 - ENST00000327535.5@IFNLR1 ENST00000327535.5 protein_coding 24187191,24180731,24169417,24161542,24159474,24159052,24154157 24187261,24180854,24169601,24161684,24159633,24159182,24157891 Gene ID= ENSG00000185436.11 TPM= 3.62 Transcript Type= protein_coding chr1 24357000 24413731 24357000 24413731 - transcript1938.chr1.nnic@STPG1 transcript1938.chr1.nnic protein_coding 24413674,24410703,24401319,24391561,24383902,24379653,24373702,24369674,24360851,24357000 24413731,24410817,24401456,24391679,24384003,24379823,24373810,24369839,24361041,24358619 Gene ID= ENSG00000001460.17 TPM= 4.98 Transcript Type= NA chr1 24357000 24413772 24357000 24413772 - ENST00000337248.8@STPG1 ENST00000337248.8 protein_coding 24413674,24401319,24391561,24383902,24379653,24373702,24369674,24360851,24357000 24413772,24401456,24391679,24384003,24379823,24373810,24369839,24361041,24358619 Gene ID= ENSG00000001460.17 TPM= 13.13 Transcript Type= protein_coding chr1 24415796 24472982 24415796 24472982 + transcript1946.chr1.nnic@NIPAL3 transcript1946.chr1.nnic protein_coding 24415796,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24468986 24415904,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24472982 Gene ID= ENSG00000001461.16 TPM= 6.34 Transcript Type= NA chr1 24415814 24466310 24415814 24466310 + ENST00000339255.2@NIPAL3 ENST00000339255.2 protein_coding 24415814,24419291,24440172,24442055,24445185,24449481,24453408,24456138,24458888,24460481,24464026,24466004 24415904,24419640,24440240,24442226,24445244,24449626,24453504,24456273,24458976,24460544,24464120,24466310 Gene ID= ENSG00000001461.16 TPM= 3.62 Transcript Type= protein_coding chr1 24502865 24537014 24502865 24537014 + transcript1948.chr1.nic@RCAN3 transcript1948.chr1.nic protein_coding 24502865,24514314,24531218,24533083,24535093 24503117,24514567,24531391,24533254,24537014 Gene ID= ENSG00000117602.11 TPM= 1.81 Transcript Type= NA chr1 24643273 24673280 24643273 24673280 + transcript1949.chr1.nic@SRRM1 transcript1949.chr1.nic protein_coding 24643273,24645984,24646667,24647079,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24663183,24666815,24669123,24670120,24671386,24672182 24643347,24646073,24646789,24647208,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24663224,24666925,24669587,24670315,24671595,24673280 Gene ID= ENSG00000133226.16 TPM= 8.9 Transcript Type= NA chr1 24643273 24673280 24643273 24673280 + transcript1954.chr1.nic@SRRM1 transcript1954.chr1.nic protein_coding 24643273,24645984,24646667,24648859,24649971,24651409,24652434,24652913,24654855,24660719,24661310,24662660,24663183,24666815,24669123,24670120,24671386,24672182 24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24663224,24666925,24669587,24670315,24671595,24673280 Gene ID= ENSG00000133226.16 TPM= 28.82 Transcript Type= NA chr1 24643301 24673280 24643301 24673280 + transcript1957.chr1.nic@SRRM1 transcript1957.chr1.nic protein_coding 24643301,24645984,24646667,24648859,24649971,24651499,24652434,24652913,24654855,24660719,24661310,24662660,24666815,24669123,24670120,24671386,24672182 24643347,24646073,24646789,24649029,24650086,24651612,24652628,24653032,24655129,24660799,24661396,24662804,24666925,24669587,24670315,24671595,24673280 Gene ID= ENSG00000133226.16 TPM= 4.83 Transcript Type= NA chr1 24745357 24844324 24745357 24844324 + ENST00000374379.8@CLIC4 ENST00000374379.8 protein_coding 24745357,24797742,24814094,24827010,24839860,24840773 24745625,24797851,24814219,24827116,24840041,24844324 Gene ID= ENSG00000169504.14 TPM= 104.14 Transcript Type= protein_coding chr1 25222679 25232493 25222679 25232493 - ENST00000236273.8@SYF2 ENST00000236273.8 protein_coding 25232444,25232104,25228998,25228118,25227442,25225002,25222679 25232493,25232211,25229123,25228235,25227532,25225100,25223431 Gene ID= ENSG00000117614.9 TPM= 56.14 Transcript Type= protein_coding chr1 25242234 25247485 25242234 25247485 - transcript1973.chr1.nic@RSRP1 transcript1973.chr1.nic protein_coding 25247309,25246444,25245150,25244454,25243550,25242234 25247485,25247029,25245301,25244498,25243633,25242705 Gene ID= ENSG00000117616.17 TPM= 2.94 Transcript Type= NA chr1 25242237 25247519 25242237 25247519 - ENST00000243189.11@RSRP1 ENST00000243189.11 protein_coding 25247309,25246444,25245150,25243550,25242237 25247519,25247029,25245301,25243633,25242705 Gene ID= ENSG00000117616.17 TPM= 8.38 Transcript Type= protein_coding chr1 25242234 25267915 25242234 25267915 - transcript1981.chr1.nic@RSRP1 transcript1981.chr1.nic protein_coding 25267740,25246444,25245150,25243550,25242234 25267915,25247029,25245301,25243633,25242705 Gene ID= ENSG00000117616.17 TPM= 3.85 Transcript Type= NA chr1 25242234 25338254 25242234 25338254 - transcript1982.chr1.nic@RSRP1 transcript1982.chr1.nic protein_coding 25337040,25246444,25245150,25243550,25242234 25338254,25247029,25245301,25243633,25242705 Gene ID= ENSG00000117616.17 TPM= 2.72 Transcript Type= NA chr1 25242234 25247485 25242234 25247485 - transcript1985.chr1.nic@RSRP1 transcript1985.chr1.nic protein_coding 25247309,25246444,25245150,25243550,25242234 25247485,25247029,25245301,25244498,25242705 Gene ID= ENSG00000117616.17 TPM= 7.24 Transcript Type= NA chr1 25242234 25267915 25242234 25267915 - transcript1988.chr1.nic@RSRP1 transcript1988.chr1.nic protein_coding 25267740,25246444,25243550,25242234 25267915,25247029,25245301,25242705 Gene ID= ENSG00000117616.17 TPM= 6.34 Transcript Type= NA chr1 25242234 25338254 25242234 25338254 - transcript1989.chr1.nic@RSRP1 transcript1989.chr1.nic protein_coding 25337040,25246444,25243550,25242234 25338254,25247029,25245301,25242705 Gene ID= ENSG00000117616.17 TPM= 6.34 Transcript Type= NA chr1 25242234 25247087 25242234 25247087 - transcript1991.chr1.nic@RSRP1 transcript1991.chr1.nic protein_coding 25246444,25243550,25242234 25247087,25245301,25242705 Gene ID= ENSG00000117616.17 TPM= 1.81 Transcript Type= NA chr1 25242249 25247454 25242249 25247454 - ENST00000498238.1@RSRP1 ENST00000498238.1 protein_coding 25247309,25246444,25243550,25242249 25247454,25247029,25245301,25242705 Gene ID= ENSG00000117616.17 TPM= 34.41 Transcript Type= retained_intron chr1 25242255 25247457 25242255 25247457 - ENST00000568254.5@RSRP1 ENST00000568254.5 protein_coding 25247309,25246444,25245150,25243550,25242255 25247457,25247029,25245301,25244224,25242705 Gene ID= ENSG00000117616.17 TPM= 1.13 Transcript Type= nonsense_mediated_decay chr1 25337917 25362361 25337917 25362361 + ENST00000374358.4@TMEM50A ENST00000374358.4 protein_coding 25337917,25340474,25342961,25351626,25352882,25356793,25360660 25338456,25340579,25343073,25351693,25352974,25356853,25362361 Gene ID= ENSG00000183726.10 TPM= 244.04 Transcript Type= protein_coding chr1 25543580 25568886 25543580 25568886 + ENST00000374338.4@LDLRAP1 ENST00000374338.4 protein_coding 25543580,25553922,25554860,25557153,25562644,25563070,25563661,25565173,25566848 25543786,25554064,25554972,25557267,25562716,25563153,25563791,25565207,25568886 Gene ID= ENSG00000157978.11 TPM= 112.29 Transcript Type= protein_coding chr1 25800193 25818221 25800193 25818221 + ENST00000374315.1@SELENON ENST00000374315.1 protein_coding 25800193,25801043,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548 25800413,25801160,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818221 Gene ID= ENSG00000162430.16 TPM= 24.45 Transcript Type= protein_coding chr1 25800176 25818224 25800176 25818224 + ENST00000361547.6@SELENON ENST00000361547.6 protein_coding 25800176,25801043,25802016,25805142,25808580,25809026,25809683,25811454,25811691,25812687,25813881,25814077,25815548 25800413,25801160,25802117,25805275,25808789,25809150,25809820,25811535,25811879,25812792,25813993,25814178,25818224 Gene ID= ENSG00000162430.16 TPM= 11.77 Transcript Type= protein_coding chr1 25820024 25834000 25820024 25834000 + transcript2064.chr1.nic@MTFR1L transcript2064.chr1.nic protein_coding 25820024,25823019,25823644,25826302,25826615,25829509,25831921 25820659,25823128,25823748,25826411,25826826,25829830,25834000 Gene ID= ENSG00000117640.17 TPM= 19.2 Transcript Type= NA chr1 25819908 25832941 25819908 25832941 + transcript2074.chr1.nic@MTFR1L transcript2074.chr1.nic protein_coding 25819908,25823019,25826302,25826615,25829509,25831921 25820029,25823748,25826411,25826826,25829830,25832941 Gene ID= ENSG00000117640.17 TPM= 18.23 Transcript Type= NA chr1 25819906 25832941 25819906 25832941 + ENST00000374303.6@MTFR1L ENST00000374303.6 protein_coding 25819906,25823019,25823644,25826302,25826615,25829509,25831921 25820029,25823128,25823748,25826411,25826826,25829830,25832941 Gene ID= ENSG00000117640.17 TPM= 144.8 Transcript Type= protein_coding chr1 25819929 25832942 25819929 25832942 + ENST00000474295.5@MTFR1L ENST00000474295.5 protein_coding 25819929,25823019,25823644,25826302,25826615,25829618,25831921 25820029,25823128,25823748,25826411,25826826,25829830,25832942 Gene ID= ENSG00000117640.17 TPM= 59.04 Transcript Type= protein_coding chr1 25820003 25832938 25820003 25832938 + ENST00000374307.9@MTFR1L ENST00000374307.9 protein_coding 25820003,25823019,25823644,25826302,25826615,25829545,25831921 25820029,25823128,25823748,25826411,25826826,25829830,25832938 Gene ID= ENSG00000117640.17 TPM= 10.14 Transcript Type= protein_coding chr1 25820193 25832938 25820193 25832938 + ENST00000374301.7@MTFR1L ENST00000374301.7 protein_coding 25820193,25823019,25823644,25826302,25826615,25829509,25831921 25820414,25823128,25823748,25826411,25826826,25829830,25832938 Gene ID= ENSG00000117640.17 TPM= 10.78 Transcript Type= protein_coding chr1 25820828 25832938 25820828 25832938 + ENST00000374300.7@MTFR1L ENST00000374300.7 protein_coding 25820828,25823019,25823644,25826302,25826615,25829509,25831921 25821003,25823128,25823748,25826411,25826826,25829830,25832938 Gene ID= ENSG00000117640.17 TPM= 13.49 Transcript Type= protein_coding chr1 25861485 25875932 25861485 25875932 - transcript2086.chr1.nnic@PAQR7 transcript2086.chr1.nnic protein_coding 25875488,25870609,25861485 25875932,25870694,25863861 Gene ID= ENSG00000182749.5 TPM= 12.68 Transcript Type= NA chr1 25900102 25906466 25900102 25906466 - ENST00000455785.6@STMN1 ENST00000455785.6 protein_coding 25906389,25904664,25903641,25901491,25900102 25906466,25904738,25903813,25901682,25901087 Gene ID= ENSG00000117632.22 TPM= 20.83 Transcript Type= protein_coding chr1 25959763 25998087 25959763 25998087 - transcript2089.chr1.nic@PAFAH2 transcript2089.chr1.nic protein_coding 25998025,25997448,25990727,25989448,25988231,25984460,25983946,25982364,25976682,25974480,25972558,25959763 25998087,25997621,25990863,25989601,25988327,25984528,25984087,25982477,25976773,25974650,25972712,25962083 Gene ID= ENSG00000158006.13 TPM= 8.6 Transcript Type= NA chr1 25959767 25998157 25959767 25998157 - ENST00000374282.7@PAFAH2 ENST00000374282.7 protein_coding 25998025,25990727,25989448,25988231,25984460,25983946,25982364,25976682,25974480,25972558,25959767 25998157,25990863,25989601,25988327,25984528,25984087,25982477,25976773,25974650,25972712,25962083 Gene ID= ENSG00000158006.13 TPM= 25.81 Transcript Type= protein_coding chr1 26111165 26125530 26111165 26125530 + ENST00000619836.4@PDIK1L ENST00000619836.4 protein_coding 26111165,26114292,26121837 26111420,26114593,26125530 Gene ID= ENSG00000175087.9 TPM= 3.17 Transcript Type= protein_coding chr1 26111837 26125543 26111837 26125543 + ENST00000374271.8@PDIK1L ENST00000374271.8 protein_coding 26111837,26112460,26114292,26121837 26111915,26112650,26114593,26125543 Gene ID= ENSG00000175087.9 TPM= 1.36 Transcript Type= protein_coding chr1 26159020 26163962 26159020 26163962 + ENST00000374268.4@FAM110D ENST00000374268.4 protein_coding 26159020,26161212 26159126,26163962 Gene ID= ENSG00000197245.5 TPM= 10.87 Transcript Type= protein_coding chr1 26169871 26170873 26169871 26170873 + ENST00000374266.6@ZNF593 ENST00000374266.6 protein_coding 26169871,26170418,26170575 26170183,26170480,26170873 Gene ID= ENSG00000142684.8 TPM= 26.26 Transcript Type= protein_coding chr1 26225320 26229840 26225320 26229840 + ENST00000451482.1@AL355877.1 ENST00000451482.1 transcribed_unprocessed_pseudogene 26225320,26227404,26227794,26229502 26225703,26227555,26227996,26229840 Gene ID= ENSG00000236155.6 TPM= 1.81 Transcript Type= processed_transcript chr1 26234168 26278808 26234168 26278808 + transcript2108.chr1.nic@CEP85 transcript2108.chr1.nic protein_coding 26234168,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277136 26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278808 Gene ID= ENSG00000130695.14 TPM= 1.81 Transcript Type= NA chr1 26234202 26278808 26234202 26278808 + ENST00000252992.8@CEP85 ENST00000252992.8 protein_coding 26234202,26239762,26244166,26255171,26257597,26258143,26259617,26268483,26269460,26271014,26272021,26274964,26276535,26277133 26234310,26239838,26244318,26255865,26257730,26258260,26259802,26268635,26269614,26271107,26272071,26275071,26276760,26278808 Gene ID= ENSG00000130695.14 TPM= 1.81 Transcript Type= protein_coding chr1 26279176 26281522 26279176 26281522 + ENST00000270792.9@SH3BGRL3 ENST00000270792.9 protein_coding 26279176,26280765,26281058 26280203,26280932,26281522 Gene ID= ENSG00000142669.14 TPM= 223.67 Transcript Type= protein_coding chr1 26282271 26306736 26282271 26306736 - transcript2124.chr1.nic@UBXN11 transcript2124.chr1.nic protein_coding 26306592,26301694,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282271 26306736,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569 Gene ID= ENSG00000158062.20 TPM= 5.13 Transcript Type= NA chr1 26282271 26306793 26282271 26306793 - transcript2130.chr1.nic@UBXN11 transcript2130.chr1.nic protein_coding 26306592,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282271 26306793,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569 Gene ID= ENSG00000158062.20 TPM= 9.06 Transcript Type= NA chr1 26282281 26306640 26282281 26306640 - ENST00000472155.5@UBXN11 ENST00000472155.5 protein_coding 26306592,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282281 26306640,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569 Gene ID= ENSG00000158062.20 TPM= 7.24 Transcript Type= retained_intron chr1 26282282 26306636 26282282 26306636 - ENST00000475591.5@UBXN11 ENST00000475591.5 protein_coding 26306592,26302813,26301694,26297962,26297427,26296919,26294205,26285823,26284362,26284142,26282864,26282649,26282282 26306636,26302918,26301722,26298062,26297481,26296995,26294331,26286037,26285541,26284245,26282937,26282789,26282569 Gene ID= ENSG00000158062.20 TPM= 6.34 Transcript Type= retained_intron chr1 26282284 26306645 26282284 26306645 - ENST00000374221.7@UBXN11 ENST00000374221.7 protein_coding 26306592,26303043,26302813,26301694,26300926,26297962,26297427,26296919,26294205,26285823,26285464,26284362,26284142,26282864,26282649,26282284 26306645,26303167,26302918,26301722,26301024,26298062,26297481,26296995,26294331,26286037,26285541,26284482,26284245,26282937,26282789,26282569 Gene ID= ENSG00000158062.20 TPM= 1.51 Transcript Type= protein_coding chr1 26282282 26306620 26282282 26306620 - ENST00000374223.5@UBXN11 ENST00000374223.5 protein_coding 26306592,26301694,26297962,26297427,26296919,26285823,26285464,26284362,26284142,26282864,26282649,26282282 26306620,26301722,26298062,26297481,26296995,26286037,26285541,26284482,26284245,26282937,26282789,26282569 Gene ID= ENSG00000158062.20 TPM= 1.51 Transcript Type= protein_coding chr1 26317957 26320523 26317957 26320523 + ENST00000374213.2@CD52 ENST00000374213.2 protein_coding 26317957,26320171 26318071,26320523 Gene ID= ENSG00000169442.8 TPM= 6.34 Transcript Type= protein_coding chr1 26432366 26471330 26432366 26471330 + transcript2136.chr1.nic@DHDDS transcript2136.chr1.nic protein_coding 26432366,26432891,26438168,26442731,26446316,26447559,26457791,26460037,26468895 26432518,26433008,26438284,26442873,26446432,26447660,26457905,26460144,26471330 Gene ID= ENSG00000117682.16 TPM= 6.11 Transcript Type= NA chr1 26432295 26471330 26432295 26471330 + transcript2142.chr1.nnic@DHDDS transcript2142.chr1.nnic protein_coding 26432295,26432891,26438168,26442731,26457791,26460037,26468895 26432376,26433008,26438284,26442873,26457905,26460144,26471330 Gene ID= ENSG00000117682.16 TPM= 2.49 Transcript Type= NA chr1 26432282 26471294 26432282 26471294 + ENST00000434391.6@DHDDS ENST00000434391.6 protein_coding 26432282,26432891,26438168,26442708,26446316,26447559,26457791,26460037,26468895 26432376,26433008,26438284,26442873,26446432,26447660,26457905,26460144,26471294 Gene ID= ENSG00000117682.16 TPM= 4.3 Transcript Type= nonsense_mediated_decay chr1 26432355 26471294 26432355 26471294 + ENST00000360009.6@DHDDS ENST00000360009.6 protein_coding 26432355,26432891,26438168,26442731,26446316,26447559,26457791,26460037,26468892 26432376,26433008,26438284,26442873,26446432,26447660,26457905,26460144,26471294 Gene ID= ENSG00000117682.16 TPM= 3.4 Transcript Type= protein_coding chr1 26472519 26475972 26472519 26475972 + ENST00000361427.5@HMGN2 ENST00000361427.5 protein_coding 26472519,26473483,26473703,26474085,26474572,26475113 26472627,26473527,26473732,26474135,26474667,26475972 Gene ID= ENSG00000198830.10 TPM= 223.67 Transcript Type= protein_coding chr1 26529767 26575025 26529767 26575025 + ENST00000374168.6@RPS6KA1 ENST00000374168.6 protein_coding 26529767,26536925,26546867,26547189,26551397,26551644,26553391,26554214,26554596,26555151,26555537,26556654,26556998,26558807,26560726,26561045,26561505,26571449,26571849,26572176,26573224,26574079 26529983,26536969,26546983,26547270,26551477,26551723,26553497,26554251,26554738,26555221,26555625,26556718,26557100,26558937,26560851,26561134,26561663,26571610,26571925,26572293,26573361,26575025 Gene ID= ENSG00000117676.13 TPM= 76.52 Transcript Type= protein_coding chr1 26543112 26575014 26543112 26575014 + ENST00000530003.5@RPS6KA1 ENST00000530003.5 protein_coding 26543112,26546867,26547189,26551397,26551644,26553391,26554214,26554596,26555151,26555537,26556654,26556998,26558807,26560726,26561045,26561505,26571449,26571849,26572176,26573224,26574079 26543221,26546983,26547270,26551477,26551723,26553497,26554251,26554738,26555221,26555625,26556718,26557100,26558937,26560851,26561134,26561663,26571610,26571925,26572293,26573361,26575014 Gene ID= ENSG00000117676.13 TPM= 4.07 Transcript Type= protein_coding chr1 26696033 26782104 26696033 26782104 + ENST00000324856.11@ARID1A ENST00000324856.11 protein_coding 26696033,26729651,26731152,26732676,26760856,26761384,26762152,26762973,26766221,26766457,26767790,26771119,26772500,26772812,26773346,26773580,26773802,26774329,26775577,26779023 26697540,26729863,26731604,26732792,26761096,26761473,26762319,26763285,26766366,26766566,26767999,26771326,26772632,26772987,26773496,26773717,26773898,26775220,26775707,26782104 Gene ID= ENSG00000117713.18 TPM= 15.39 Transcript Type= protein_coding chr1 26787313 26798401 26787313 26798401 + transcript2164.chr1.nic@PIGV transcript2164.chr1.nic protein_coding 26787313,26790759,26794113,26797563 26787989,26790893,26795234,26798401 Gene ID= ENSG00000060642.10 TPM= 51.32 Transcript Type= NA chr1 26788185 26798401 26788185 26798401 + transcript2168.chr1.nic@PIGV transcript2168.chr1.nic protein_coding 26788185,26790759,26794113,26797563 26788394,26790893,26795234,26798401 Gene ID= ENSG00000060642.10 TPM= 12.38 Transcript Type= NA chr1 26787995 26798398 26787995 26798398 + ENST00000078527.8@PIGV ENST00000078527.8 protein_coding 26787995,26790759,26794113,26797563 26788268,26790893,26795234,26798398 Gene ID= ENSG00000060642.10 TPM= 31.4 Transcript Type= protein_coding chr1 26826680 26857601 26826680 26857601 + transcript2173.chr1.nnic@ZDHHC18 transcript2173.chr1.nnic protein_coding 26826680,26832447,26848608,26850301,26850558,26851129,26852753,26853726,26856848 26827139,26832607,26848757,26850438,26850606,26851231,26852865,26853825,26857601 Gene ID= ENSG00000204160.11 TPM= 3.62 Transcript Type= NA chr1 26876133 26890297 26876133 26890297 - ENST00000374135.8@GPN2 ENST00000374135.8 protein_coding 26889686,26888969,26885973,26884160,26876133 26890297,26889125,26886133,26884290,26879749 Gene ID= ENSG00000142751.14 TPM= 38.94 Transcript Type= protein_coding chr1 26890489 26900466 26890489 26900466 - ENST00000361720.9@GPATCH3 ENST00000361720.9 protein_coding 26899992,26897301,26894236,26893389,26892670,26892411,26890489 26900466,26897725,26894410,26893448,26892791,26892538,26891226 Gene ID= ENSG00000198746.12 TPM= 30.79 Transcript Type= protein_coding chr1 26911489 26913966 26911489 26913966 - ENST00000254227.3@NR0B2 ENST00000254227.3 protein_coding 26913409,26911489 26913966,26912086 Gene ID= ENSG00000131910.4 TPM= 43.47 Transcript Type= protein_coding chr1 26921726 26946862 26921726 26946862 + ENST00000321265.9@NUDC ENST00000321265.9 protein_coding 26921726,26924089,26941457,26941753,26942660,26942871,26945390,26945568,26946130 26921929,26924166,26941660,26941818,26942776,26943065,26945473,26945686,26946862 Gene ID= ENSG00000090273.13 TPM= 469.07 Transcript Type= protein_coding chr1 26949557 26960516 26949557 26960516 - transcript2201.chr1.nnic@KDF1 transcript2201.chr1.nnic protein_coding 26960409,26951342,26950682,26949557 26960516,26952412,26950756,26950151 Gene ID= ENSG00000175707.8 TPM= 7.7 Transcript Type= NA chr1 26949562 26960406 26949562 26960406 - ENST00000320567.5@KDF1 ENST00000320567.5 protein_coding 26960350,26951342,26950682,26949562 26960406,26952412,26950756,26950151 Gene ID= ENSG00000175707.8 TPM= 4.07 Transcript Type= protein_coding chr1 26993692 27000653 26993692 27000653 + transcript2202.chr1.nnic@TRNP1 transcript2202.chr1.nnic protein_coding 26993692,26993894,26999847 26993854,26994612,27000653 Gene ID= ENSG00000253368.3 TPM= 7.24 Transcript Type= NA chr1 27005020 27012836 27005020 27012836 - ENST00000289166.5@FAM46B ENST00000289166.5 protein_coding 27012407,27005020 27012836,27006957 Gene ID= ENSG00000158246.7 TPM= 1.81 Transcript Type= protein_coding chr1 27234689 27308242 27234689 27308242 + transcript2212.chr1.nnic@WDTC1 transcript2212.chr1.nnic protein_coding 27234689,27260956,27263152,27282239,27283338,27287674,27292215,27294022,27294514,27296326,27297048,27297938,27301226,27303621,27305001,27306186,27306700,27306895 27234951,27261102,27263235,27282285,27283449,27287861,27292397,27294116,27294629,27296401,27297156,27298111,27301461,27303795,27305193,27306272,27306782,27308242 Gene ID= ENSG00000142784.15 TPM= 4.23 Transcript Type= NA chr1 27234516 27308633 27234516 27308633 + ENST00000319394.7@WDTC1 ENST00000319394.7 protein_coding 27234516,27260956,27263152,27282239,27283338,27287674,27292215,27294022,27294514,27296326,27297048,27297938,27301226,27303621,27305001,27306186 27234951,27261102,27263235,27282285,27283449,27287861,27292397,27294116,27294629,27296401,27297156,27298111,27301461,27303795,27305193,27308633 Gene ID= ENSG00000142784.15 TPM= 49.96 Transcript Type= protein_coding chr1 27234668 27308244 27234668 27308244 + ENST00000361771.7@WDTC1 ENST00000361771.7 protein_coding 27234668,27260956,27263152,27282239,27283338,27287674,27292215,27294022,27294514,27296326,27297051,27297938,27301226,27303621,27305001,27306186 27234951,27261102,27263235,27282285,27283449,27287861,27292397,27294116,27294629,27296401,27297156,27298111,27301461,27303795,27305193,27308244 Gene ID= ENSG00000142784.15 TPM= 9.21 Transcript Type= protein_coding chr1 27322160 27336400 27322160 27336400 + ENST00000374076.8@TMEM222 ENST00000374076.8 protein_coding 27322160,27330720,27332070,27333958,27334151,27335379 27322391,27330804,27332101,27334054,27334281,27336400 Gene ID= ENSG00000186501.14 TPM= 71.99 Transcript Type= protein_coding chr1 27322247 27336400 27322247 27336400 + ENST00000464720.5@TMEM222 ENST00000464720.5 protein_coding 27322247,27330720,27330985,27332070,27333958,27334151,27335379 27322391,27330804,27331137,27332101,27334054,27334281,27336400 Gene ID= ENSG00000186501.14 TPM= 6.79 Transcript Type= nonsense_mediated_decay chr1 27355188 27366959 27355188 27366959 - transcript2228.chr1.nic@MAP3K6 transcript2228.chr1.nic protein_coding 27366258,27364773,27364204,27363917,27363442,27362851,27362641,27362091,27361705,27361520,27361346,27361157,27360921,27360705,27360241,27359858,27359417,27358709,27358419,27358181,27357711,27357009,27356590,27356388,27356026,27355669,27355188 27366959,27364912,27364394,27364085,27363548,27363021,27362753,27362250,27361867,27361627,27361395,27361252,27361008,27360838,27360368,27359994,27359522,27358866,27358611,27358319,27357876,27357576,27356749,27356500,27356099,27355745,27355469 Gene ID= ENSG00000142733.14 TPM= 1.81 Transcript Type= NA chr1 27355186 27366858 27355186 27366858 - ENST00000374040.7@MAP3K6 ENST00000374040.7 protein_coding 27366258,27364773,27364204,27363917,27363442,27362851,27362641,27362091,27361705,27361520,27361346,27361157,27360921,27360705,27360241,27359858,27359417,27358709,27358419,27358181,27357711,27357400,27357009,27356590,27356388,27356026,27355669,27355186 27366858,27364912,27364394,27364085,27363548,27363021,27362753,27362250,27361867,27361627,27361395,27361252,27361008,27360838,27360368,27359994,27359522,27358866,27358611,27358319,27357876,27357576,27357114,27356749,27356500,27356099,27355745,27355469 Gene ID= ENSG00000142733.14 TPM= 11.77 Transcript Type= protein_coding chr1 27369112 27374824 27369112 27374824 - ENST00000270879.8@FCN3 ENST00000270879.8 protein_coding 27374728,27374356,27373965,27373488,27373136,27370843,27370596,27369112 27374824,27374451,27374009,27373520,27373263,27370972,27370730,27369477 Gene ID= ENSG00000142748.12 TPM= 87.54 Transcript Type= protein_coding chr1 27369112 27374824 27369112 27374824 - ENST00000354982.2@FCN3 ENST00000354982.2 protein_coding 27374728,27374356,27373965,27373136,27370843,27370596,27369112 27374824,27374451,27374009,27373263,27370972,27370730,27369477 Gene ID= ENSG00000142748.12 TPM= 18.72 Transcript Type= protein_coding chr1 27404226 27490158 27404226 27490158 - ENST00000618852.4@WASF2 ENST00000618852.4 protein_coding 27489986,27428761,27418954,27418269,27415985,27414833,27412572,27409692,27404226 27490158,27428933,27419088,27418422,27416102,27414963,27412727,27410206,27408346 Gene ID= ENSG00000158195.10 TPM= 61.58 Transcript Type= protein_coding chr1 27612064 27635277 27612064 27635277 - ENST00000374005.7@FGR ENST00000374005.7 protein_coding 27635065,27625089,27623691,27623042,27621559,27617193,27616857,27615689,27615434,27614850,27614430,27613219,27612064 27635277,27625151,27623929,27623144,27621657,27617296,27617006,27615844,27615613,27614926,27614583,27613350,27613122 Gene ID= ENSG00000000938.12 TPM= 8.15 Transcript Type= protein_coding chr1 27666066 27672198 27666066 27672198 - ENST00000362020.4@IFI6 ENST00000362020.4 protein_coding 27672123,27669233,27668458,27668226,27666066 27672198,27669346,27668535,27668375,27666475 Gene ID= ENSG00000126709.14 TPM= 24.45 Transcript Type= protein_coding chr1 27666061 27672218 27666061 27672218 - ENST00000361157.10@IFI6 ENST00000361157.10 protein_coding 27672123,27669245,27668458,27668226,27666061 27672218,27669346,27668535,27668375,27666475 Gene ID= ENSG00000126709.14 TPM= 76.97 Transcript Type= protein_coding chr1 27725979 27763122 27725979 27763122 + ENST00000373954.10@FAM76A ENST00000373954.10 protein_coding 27725979,27727472,27732603,27734031,27744654,27749068,27755195,27759526,27760495 27726161,27727536,27732657,27734183,27744811,27749154,27755330,27759627,27763122 Gene ID= ENSG00000009780.15 TPM= 3.62 Transcript Type= protein_coding chr1 27773183 27824452 27773183 27824452 + ENST00000373943.8@STX12 ENST00000373943.8 protein_coding 27773183,27789562,27793533,27801678,27810246,27812163,27817851,27819650,27822231 27773425,27789631,27793632,27801815,27810289,27812268,27817923,27819732,27824452 Gene ID= ENSG00000117758.13 TPM= 131.3 Transcript Type= protein_coding chr1 27830778 27851676 27830778 27851676 + ENST00000311772.9@PPP1R8 ENST00000311772.9 protein_coding 27830778,27832756,27838699,27841014,27843186,27847028,27850093 27830891,27832816,27838852,27841234,27843330,27847092,27851676 Gene ID= ENSG00000117751.17 TPM= 1.81 Transcript Type= protein_coding chr1 27872568 27886673 27872568 27886673 + ENST00000373921.7@THEMIS2 ENST00000373921.7 protein_coding 27872568,27876588,27879644,27881971,27885295,27885867 27872665,27876728,27880054,27883043,27885451,27886673 Gene ID= ENSG00000130775.15 TPM= 32.6 Transcript Type= protein_coding chr1 27872544 27886685 27872544 27886685 + ENST00000373925.5@THEMIS2 ENST00000373925.5 protein_coding 27872544,27876588,27879644,27885295,27885867 27872665,27876728,27880054,27885451,27886685 Gene ID= ENSG00000130775.15 TPM= 2.72 Transcript Type= protein_coding chr1 27891524 27914743 27891524 27914743 - ENST00000373912.7@RPA2 ENST00000373912.7 protein_coding 27914434,27914063,27907181,27906928,27897633,27897005,27894290,27894012,27891524 27914743,27914169,27907282,27907041,27897707,27897121,27894397,27894106,27892247 Gene ID= ENSG00000117748.9 TPM= 47.09 Transcript Type= protein_coding chr1 27959952 27968093 27959952 27968093 + transcript2278.chr1.nnic@XKR8 transcript2278.chr1.nnic protein_coding 27959952,27963497,27965351,27966503 27960362,27963693,27965458,27968093 Gene ID= ENSG00000158156.7 TPM= 2.26 Transcript Type= NA chr1 27959462 27968096 27959462 27968096 + ENST00000373884.5@XKR8 ENST00000373884.5 protein_coding 27959462,27963497,27966503 27960362,27963693,27968096 Gene ID= ENSG00000158156.7 TPM= 28.52 Transcript Type= protein_coding chr1 27970347 28088637 27970347 28088637 - ENST00000540618.5@EYA3 ENST00000540618.5 protein_coding 28088524,28057994,28048383,28042571,28038839,28035544,28017154,28013111,28010947,28004336,27999960,27997320,27993400,27989697,27988535,27978374,27970347 28088637,28058094,28048426,28042650,28038905,28035680,28017239,28013294,28011086,28004419,28000049,27997378,27993560,27989811,27988656,27978474,27974546 Gene ID= ENSG00000158161.15 TPM= 8.15 Transcript Type= protein_coding chr1 28149352 28176690 28149352 28176690 - transcript2284.chr1.nnic@PTAFR transcript2284.chr1.nnic protein_coding 28176592,28172265,28149352 28176690,28172527,28151059 Gene ID= ENSG00000169403.11 TPM= 4.53 Transcript Type= NA chr1 28147166 28177188 28147166 28177188 - ENST00000373857.7@PTAFR ENST00000373857.7 protein_coding 28176592,28147166 28177188,28151059 Gene ID= ENSG00000169403.11 TPM= 13.58 Transcript Type= protein_coding chr1 28200278 28233025 28200278 28233025 - ENST00000263697.5@DNAJC8 ENST00000263697.5 protein_coding 28232921,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200278 28233025,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370 Gene ID= ENSG00000126698.10 TPM= 108.21 Transcript Type= protein_coding chr1 28200559 28233025 28200559 28233025 - ENST00000489277.5@DNAJC8 ENST00000489277.5 protein_coding 28232921,28230131,28228922,28214940,28210571,28209972,28208342,28205258,28203747,28200559 28233025,28230252,28229023,28214996,28210637,28210066,28208413,28205349,28203822,28201370 Gene ID= ENSG00000126698.10 TPM= 5.89 Transcript Type= processed_transcript chr1 28236133 28238100 28236133 28238100 + ENST00000335514.9@ATPIF1 ENST00000335514.9 protein_coding 28236133,28236361,28237837 28236270,28236452,28238100 Gene ID= ENSG00000130770.17 TPM= 184.73 Transcript Type= protein_coding chr1 28236154 28238098 28236154 28238098 + ENST00000465645.1@ATPIF1 ENST00000465645.1 protein_coding 28236154,28236361 28236270,28238098 Gene ID= ENSG00000130770.17 TPM= 12.68 Transcript Type= protein_coding chr1 28236109 28238105 28236109 28238105 + ENST00000497986.5@ATPIF1 ENST00000497986.5 protein_coding 28236109,28236361,28237761 28236270,28236452,28238105 Gene ID= ENSG00000130770.17 TPM= 3.62 Transcript Type= protein_coding chr1 28259527 28282491 28259527 28282491 + ENST00000253063.3@SESN2 ENST00000253063.3 protein_coding 28259527,28269183,28271674,28272284,28272581,28273358,28274040,28274825,28279097,28280716 28259937,28269248,28271871,28272466,28272793,28273508,28274158,28275015,28279241,28282491 Gene ID= ENSG00000130766.4 TPM= 36.22 Transcript Type= protein_coding chr1 28329009 28335966 28329009 28335966 + transcript2299.chr1.nnic@MED18 transcript2299.chr1.nnic protein_coding 28329009,28330597,28334417,28335709 28329180,28330735,28335160,28335966 Gene ID= ENSG00000130772.13 TPM= 3.62 Transcript Type= NA chr1 28329038 28335967 28329038 28335967 + ENST00000373842.8@MED18 ENST00000373842.8 protein_coding 28329038,28330597,28334417 28329180,28330735,28335967 Gene ID= ENSG00000130772.13 TPM= 11.77 Transcript Type= protein_coding chr1 28369603 28500369 28369603 28500369 + ENST00000373839.7@PHACTR4 ENST00000373839.7 protein_coding 28369603,28407410,28459085,28460212,28465685,28466382,28473554,28476107,28480451,28489170,28490951,28491650,28493015,28496534 28369825,28407463,28459258,28460292,28465849,28466768,28474151,28476291,28480604,28489225,28491012,28491787,28493091,28500369 Gene ID= ENSG00000204138.12 TPM= 7.24 Transcript Type= protein_coding chr1 28506044 28538986 28506044 28538986 + transcript2311.chr1.nnic@RCC1 transcript2311.chr1.nnic protein_coding 28506044,28508128,28508830,28516725,28517974,28529858,28530523,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832 28506084,28508160,28508905,28516867,28518308,28529939,28530573,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28538986 Gene ID= ENSG00000180198.15 TPM= 3.4 Transcript Type= NA chr1 28506043 28538986 28506043 28538986 + transcript2316.chr1.nic@RCC1 transcript2316.chr1.nic protein_coding 28506043,28508128,28508830,28516725,28529858,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832 28506084,28508160,28508905,28516867,28529939,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28538986 Gene ID= ENSG00000180198.15 TPM= 4.3 Transcript Type= NA chr1 28506043 28538986 28506043 28538986 + transcript2317.chr1.nic@RCC1 transcript2317.chr1.nic protein_coding 28506043,28508128,28508830,28529858,28530523,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832 28506084,28508160,28508905,28529939,28530573,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28538986 Gene ID= ENSG00000180198.15 TPM= 3.4 Transcript Type= NA chr1 28505943 28539196 28505943 28539196 + ENST00000398958.6@RCC1 ENST00000398958.6 protein_coding 28505943,28508128,28508830,28529858,28531803,28532171,28535050,28535258,28535871,28536262,28536747,28537832 28506084,28508160,28508905,28529939,28531990,28532350,28535146,28535380,28536026,28536381,28536899,28539196 Gene ID= ENSG00000180198.15 TPM= 1.58 Transcript Type= protein_coding chr1 28505980 28510892 28505980 28510892 + ENST00000413987.1@SNHG3 ENST00000413987.1 sense_intronic 28505980,28508128,28508830 28506084,28508160,28510892 Gene ID= ENSG00000242125.3 TPM= 22.64 Transcript Type= retained_intron chr1 28553085 28578545 28553085 28578545 + ENST00000373830.4@TRNAU1AP ENST00000373830.4 protein_coding 28553085,28553640,28560633,28561346,28564703,28567294,28571176,28571867,28577500 28553137,28553737,28560732,28561398,28564834,28567413,28571338,28571900,28578545 Gene ID= ENSG00000180098.9 TPM= 9.06 Transcript Type= protein_coding chr1 28578547 28581872 28578547 28581872 - transcript2332.chr1.nic@SNHG12 transcript2332.chr1.nic antisense_RNA 28581590,28581111,28580560,28579942,28579533,28578547 28581872,28581229,28580646,28579981,28579587,28578680 Gene ID= ENSG00000197989.13 TPM= 1.81 Transcript Type= NA chr1 28578547 28581872 28578547 28581872 - transcript2333.chr1.nic@SNHG12 transcript2333.chr1.nic antisense_RNA 28581590,28581111,28580560,28579533,28578547 28581872,28581229,28580646,28579981,28578680 Gene ID= ENSG00000197989.13 TPM= 3.62 Transcript Type= NA chr1 28578538 28581834 28578538 28581834 - ENST00000531126.5@SNHG12 ENST00000531126.5 antisense_RNA 28581590,28581111,28580560,28579912,28579533,28578538 28581834,28581229,28580646,28579981,28579587,28578680 Gene ID= ENSG00000197989.13 TPM= 1.81 Transcript Type= antisense_RNA chr1 28578538 28581872 28578538 28581872 - ENST00000470977.5@SNHG12 ENST00000470977.5 antisense_RNA 28581590,28581094,28580560,28579533,28578538 28581872,28581229,28580646,28579981,28578680 Gene ID= ENSG00000197989.13 TPM= 3.62 Transcript Type= retained_intron chr1 28736935 28769775 28736935 28769775 + transcript2348.chr1.nnic@YTHDF2 transcript2348.chr1.nnic protein_coding 28736935,28737658,28738259,28768929 28737147,28737682,28738338,28769775 Gene ID= ENSG00000198492.15 TPM= 6.34 Transcript Type= NA chr1 28737746 28769782 28737746 28769782 + transcript2349.chr1.nic@YTHDF2 transcript2349.chr1.nic protein_coding 28737746,28738259,28742403,28768929 28737797,28738338,28743986,28769782 Gene ID= ENSG00000198492.15 TPM= 6.04 Transcript Type= NA chr1 28736759 28769775 28736759 28769775 + ENST00000373812.7@YTHDF2 ENST00000373812.7 protein_coding 28736759,28737658,28738259,28742403,28768929 28737147,28737682,28738338,28743986,28769775 Gene ID= ENSG00000198492.15 TPM= 159.08 Transcript Type= protein_coding chr1 28736950 28769125 28736950 28769125 + ENST00000478283.5@YTHDF2 ENST00000478283.5 protein_coding 28736950,28738259,28742403,28768929 28737682,28738338,28743986,28769125 Gene ID= ENSG00000198492.15 TPM= 1.2 Transcript Type= processed_transcript chr1 28887076 29120033 28887076 29120033 + transcript2354.chr1.nic@EPB41 transcript2354.chr1.nic protein_coding 28887076,28987448,28993330,28997215,29011865,29015692,29018224,29030400,29033093,29035826,29039254,29053104,29064982,29097807,29109336,29112368,29115699,29116819 28887210,28987905,28993542,28997319,29011907,29015767,29018442,29030487,29033245,29035923,29039426,29053312,29065158,29097935,29109437,29112448,29115803,29120033 Gene ID= ENSG00000159023.19 TPM= 5.43 Transcript Type= NA chr1 29119428 29123935 29119428 29123935 - ENST00000521452.1@TMEM200B ENST00000521452.1 protein_coding 29123856,29119428 29123935,29121848 Gene ID= ENSG00000253304.1 TPM= 19.92 Transcript Type= protein_coding chr1 29147740 29181945 29147740 29181945 - transcript2365.chr1.nic@SRSF4 transcript2365.chr1.nic protein_coding 29181646,29168503,29166729,29165890,29160375,29159374,29154696,29150103,29147740 29181945,29168638,29166912,29166064,29160517,29159486,29154910,29150192,29149226 Gene ID= ENSG00000116350.16 TPM= 5.43 Transcript Type= NA chr1 29147743 29181987 29147743 29181987 - ENST00000373795.6@SRSF4 ENST00000373795.6 protein_coding 29181646,29160375,29159374,29154696,29150103,29147743 29181987,29160517,29159486,29154910,29150192,29149226 Gene ID= ENSG00000116350.16 TPM= 167.53 Transcript Type= protein_coding chr1 29192885 29230950 29192885 29230950 - transcript2377.chr1.nic@MECR transcript2377.chr1.nic protein_coding 29230731,29220838,29216588,29216005,29206762,29203131,29201943,29201374,29200516,29196198,29195941,29192885 29230950,29220921,29216685,29216136,29206905,29203233,29202045,29201518,29200589,29196258,29196013,29194179 Gene ID= ENSG00000116353.15 TPM= 1.81 Transcript Type= NA chr1 29192882 29230930 29192882 29230930 - transcript2378.chr1.nic@MECR transcript2378.chr1.nic protein_coding 29230731,29223140,29220838,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29192882 29230930,29223260,29220921,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179 Gene ID= ENSG00000116353.15 TPM= 1.81 Transcript Type= NA chr1 29193819 29230958 29193819 29230958 - transcript2380.chr1.nic@MECR transcript2380.chr1.nic protein_coding 29230731,29216588,29216005,29206762,29203131,29201943,29201374,29200516,29196198,29195941,29193819 29230958,29216685,29216136,29206905,29203233,29202045,29201518,29200589,29196258,29196013,29194179 Gene ID= ENSG00000116353.15 TPM= 3.62 Transcript Type= NA chr1 29192887 29230950 29192887 29230950 - transcript2381.chr1.nic@MECR transcript2381.chr1.nic protein_coding 29230731,29220838,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29192887 29230950,29220921,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179 Gene ID= ENSG00000116353.15 TPM= 8.15 Transcript Type= NA chr1 29193822 29230958 29193822 29230958 - transcript2387.chr1.nic@MECR transcript2387.chr1.nic protein_coding 29230731,29216588,29216005,29206762,29203131,29201943,29200516,29195941,29193822 29230958,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29194179 Gene ID= ENSG00000116353.15 TPM= 1.81 Transcript Type= NA chr1 29193817 29230932 29193817 29230932 - ENST00000263702.10@MECR ENST00000263702.10 protein_coding 29230731,29216588,29216005,29206762,29203131,29201943,29200516,29196198,29195941,29193817 29230932,29216685,29216136,29206905,29203233,29202045,29200589,29196258,29196013,29194179 Gene ID= ENSG00000116353.15 TPM= 40.75 Transcript Type= protein_coding chr1 29260136 29326799 29260136 29326799 + transcript2390.chr1.nic@PTPRU transcript2390.chr1.nic protein_coding 29260136,29260610,29275448,29279012,29279456,29280039,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599 29260267,29260903,29275756,29279121,29279657,29280141,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311553,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326799 Gene ID= ENSG00000060656.19 TPM= 6.34 Transcript Type= NA chr1 29260136 29326799 29260136 29326799 + transcript2391.chr1.nnic@PTPRU transcript2391.chr1.nnic protein_coding 29260136,29260610,29275448,29279012,29279456,29280039,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599 29260267,29260903,29275756,29279121,29279657,29280141,29292026,29304045,29304849,29305428,29310780,29311553,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326799 Gene ID= ENSG00000060656.19 TPM= 2.72 Transcript Type= NA chr1 29280971 29326799 29280971 29326799 + transcript2392.chr1.nnic@PTPRU transcript2392.chr1.nnic protein_coding 29280971,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599 29281082,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311553,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326799 Gene ID= ENSG00000060656.19 TPM= 4.53 Transcript Type= NA chr1 29283420 29326799 29283420 29326799 + transcript2393.chr1.nic@PTPRU transcript2393.chr1.nic protein_coding 29283420,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599 29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311553,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326799 Gene ID= ENSG00000060656.19 TPM= 4.53 Transcript Type= NA chr1 29236549 29326813 29236549 29326813 + ENST00000428026.6@PTPRU ENST00000428026.6 protein_coding 29236549,29255275,29258505,29259261,29259449,29259870,29260610,29275448,29279012,29279456,29280039,29282676,29283940,29284731,29291869,29303855,29304774,29305352,29310744,29311456,29311643,29312552,29315372,29316002,29317748,29320685,29323371,29323631,29325191,29325599 29236717,29255406,29258776,29259342,29259564,29260044,29260903,29275756,29279121,29279657,29280141,29282949,29283976,29284869,29292026,29304045,29304849,29305428,29310780,29311544,29311759,29312706,29315507,29316151,29317921,29320825,29323496,29323788,29325326,29326813 Gene ID= ENSG00000060656.19 TPM= 1.81 Transcript Type= protein_coding chr1 30732469 30757820 30732469 30757820 - ENST00000294507.3@LAPTM5 ENST00000294507.3 protein_coding 30757659,30742456,30741640,30739809,30738940,30737604,30735173,30732469 30757820,30742549,30741716,30739937,30739062,30737699,30735265,30733917 Gene ID= ENSG00000162511.7 TPM= 178.39 Transcript Type= protein_coding chr1 30931505 31065723 30931505 31065723 - transcript2410.chr1.nnic@PUM1 transcript2410.chr1.nnic protein_coding 31065616,31059204,31028796,31006994,31005853,30995054,30992390,30988309,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30931505 31065723,31059577,31028864,31007102,31006031,30995220,30992660,30988380,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342 Gene ID= ENSG00000134644.15 TPM= 2.72 Transcript Type= NA chr1 30931505 31065723 30931505 31065723 - transcript2420.chr1.nnic@PUM1 transcript2420.chr1.nnic protein_coding 31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30931505 31065723,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967256,30966197,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342 Gene ID= ENSG00000134644.15 TPM= 3.32 Transcript Type= NA chr1 30931505 31065723 30931505 31065723 - transcript2423.chr1.nic@PUM1 transcript2423.chr1.nic protein_coding 31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30931505 31065723,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342 Gene ID= ENSG00000134644.15 TPM= 8.45 Transcript Type= NA chr1 30931506 31065704 30931506 31065704 - ENST00000373747.7@PUM1 ENST00000373747.7 protein_coding 31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30931506 31065704,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980166,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342 Gene ID= ENSG00000134644.15 TPM= 11.77 Transcript Type= protein_coding chr1 30931506 31065698 30931506 31065698 - ENST00000257075.9@PUM1 ENST00000257075.9 protein_coding 31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950133,30945346,30941998,30941151,30936643,30931506 31065698,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342 Gene ID= ENSG00000134644.15 TPM= 16.6 Transcript Type= protein_coding chr1 30932826 31065695 30932826 31065695 - ENST00000426105.6@PUM1 ENST00000426105.6 protein_coding 31065616,31059204,31028796,31006994,31005853,30995054,30992390,30981312,30980062,30974651,30968354,30967167,30965982,30964674,30953714,30952234,30950127,30945346,30941998,30941151,30936643,30932826 31065695,31059577,31028864,31007102,31006031,30995220,30992660,30981405,30980163,30974802,30968492,30967310,30966278,30964910,30953981,30952363,30950261,30945483,30942123,30941272,30936835,30933342 Gene ID= ENSG00000134644.15 TPM= 3.02 Transcript Type= protein_coding chr1 31179165 31240086 31179165 31240086 - transcript2436.chr1.nic@NKAIN1 transcript2436.chr1.nic protein_coding 31239494,31188050,31183817,31182530,31181860,31179165 31240086,31188187,31184014,31182590,31181941,31181712 Gene ID= ENSG00000084628.9 TPM= 4.53 Transcript Type= NA chr1 31259568 31296770 31259568 31296770 - ENST00000263694.8@SNRNP40 ENST00000263694.8 protein_coding 31296611,31293219,31291913,31289254,31281374,31271379,31269158,31267871,31261529,31259568 31296770,31293348,31292006,31289419,31281496,31271499,31269240,31267932,31261632,31260121 Gene ID= ENSG00000060688.12 TPM= 51.62 Transcript Type= protein_coding chr1 31296982 31364953 31296982 31364953 + ENST00000618216.4@ZCCHC17 ENST00000618216.4 protein_coding 31296982,31310044,31319109,31337175,31338957,31346640,31364032 31297075,31310164,31319166,31337275,31339048,31346740,31364953 Gene ID= ENSG00000121766.15 TPM= 1.51 Transcript Type= protein_coding chr1 31296995 31364936 31296995 31364936 + ENST00000344147.9@ZCCHC17 ENST00000344147.9 protein_coding 31296995,31310044,31319109,31337175,31338957,31346640,31348829,31364032 31297075,31310164,31319166,31337275,31339048,31346740,31348974,31364936 Gene ID= ENSG00000121766.15 TPM= 35.02 Transcript Type= protein_coding chr1 31296982 31364953 31296982 31364953 + ENST00000616393.4@ZCCHC17 ENST00000616393.4 protein_coding 31296982,31310044,31319109,31338957,31346640,31348829,31364032 31297075,31310164,31319166,31339048,31346740,31348974,31364953 Gene ID= ENSG00000121766.15 TPM= 1.51 Transcript Type= protein_coding chr1 31359106 31373127 31359106 31373127 - transcript2450.chr1.nnic@FABP3 transcript2450.chr1.nnic protein_coding 31372942,31369385,31367393,31359106 31373127,31369557,31367494,31360830 Gene ID= ENSG00000121769.7 TPM= 4.83 Transcript Type= NA chr1 31365463 31373076 31365463 31373076 - transcript2451.chr1.nnic@FABP3 transcript2451.chr1.nnic protein_coding 31372942,31369385,31367393,31365463 31373076,31369557,31367452,31365939 Gene ID= ENSG00000121769.7 TPM= 3.02 Transcript Type= NA chr1 31365625 31373076 31365625 31373076 - ENST00000373713.6@FABP3 ENST00000373713.6 protein_coding 31372942,31369385,31367393,31365625 31373076,31369557,31367494,31365939 Gene ID= ENSG00000121769.7 TPM= 21.13 Transcript Type= protein_coding chr1 31413116 31434678 31413116 31434678 + ENST00000373709.7@SERINC2 ENST00000373709.7 protein_coding 31413116,31423693,31424683,31425330,31425776,31426654,31428978,31429397,31432967,31434064 31413304,31423854,31424873,31425409,31425913,31426823,31429068,31429538,31433185,31434678 Gene ID= ENSG00000168528.11 TPM= 28.98 Transcript Type= protein_coding chr1 31576515 31587692 31576515 31587692 + transcript2465.chr1.nic@TINAGL1 transcript2465.chr1.nic protein_coding 31576515,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586839 31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31586755,31587692 Gene ID= ENSG00000142910.15 TPM= 10.97 Transcript Type= NA chr1 31576535 31587686 31576535 31587686 + ENST00000271064.11@TINAGL1 ENST00000271064.11 protein_coding 31576535,31577134,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839 31576595,31577458,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587686 Gene ID= ENSG00000142910.15 TPM= 280.85 Transcript Type= protein_coding chr1 31578145 31587682 31578145 31587682 + ENST00000537531.2@TINAGL1 ENST00000537531.2 protein_coding 31578145,31579204,31583149,31583461,31584678,31584886,31585151,31585440,31585753,31586710,31586839 31578188,31579267,31583241,31583575,31584801,31585036,31585340,31585485,31585876,31586755,31587682 Gene ID= ENSG00000142910.15 TPM= 3.76 Transcript Type= protein_coding chr1 31629867 31644899 31629867 31644899 - transcript2481.chr1.nnic@PEF1 transcript2481.chr1.nnic protein_coding 31644841,31635222,31633159,31632495,31630550,31629867 31644899,31635522,31633314,31632638,31630842,31630098 Gene ID= ENSG00000162517.12 TPM= 5.43 Transcript Type= NA chr1 31629862 31644887 31629862 31644887 - ENST00000373703.4@PEF1 ENST00000373703.4 protein_coding 31644841,31635222,31633159,31632495,31629862 31644887,31635522,31633314,31632638,31630842 Gene ID= ENSG00000162517.12 TPM= 136.74 Transcript Type= protein_coding chr1 31652247 31704319 31652247 31704319 - ENST00000373672.7@COL16A1 ENST00000373672.7 protein_coding 31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679804,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31670602,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652247 31704319,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679851,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31670646,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853 Gene ID= ENSG00000084636.17 TPM= 20.74 Transcript Type= protein_coding chr1 31652522 31704079 31652522 31704079 - transcript2498.chr1.nic@COL16A1 transcript2498.chr1.nic protein_coding 31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31670602,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652522 31704079,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31670646,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853 Gene ID= ENSG00000084636.17 TPM= 13.49 Transcript Type= NA chr1 31652522 31704015 31652522 31704015 - transcript2500.chr1.nic@COL16A1 transcript2500.chr1.nic protein_coding 31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679804,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652522 31704015,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679851,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853 Gene ID= ENSG00000084636.17 TPM= 2.17 Transcript Type= NA chr1 31652522 31704016 31652522 31704016 - transcript2502.chr1.nic@COL16A1 transcript2502.chr1.nic protein_coding 31703837,31702121,31700041,31699813,31698483,31697906,31697220,31696963,31696088,31695761,31695186,31694144,31693092,31692767,31692598,31692474,31692005,31691598,31691417,31691188,31690529,31690367,31689741,31689050,31688861,31688467,31686244,31686091,31685639,31684821,31684523,31684109,31683950,31683707,31683334,31683194,31682934,31681023,31680905,31680042,31679632,31675258,31675007,31672724,31672596,31672416,31671615,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652522 31704016,31702227,31700115,31699930,31698606,31698172,31697300,31697088,31696141,31695787,31695221,31694170,31693154,31692808,31692642,31692509,31692067,31691642,31691512,31691226,31690573,31690393,31689851,31689085,31688971,31688502,31686279,31686135,31685770,31684856,31684630,31684231,31684003,31683748,31683369,31683247,31683002,31681067,31680931,31680101,31679685,31675311,31675039,31672840,31672637,31672502,31671659,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853 Gene ID= ENSG00000084636.17 TPM= 3.08 Transcript Type= NA chr1 31652249 31670431 31652249 31670431 - transcript2508.chr1.nic@COL16A1 transcript2508.chr1.nic protein_coding 31669811,31668802,31668165,31667575,31666037,31665882,31665583,31665172,31662587,31662334,31661660,31661414,31661066,31660585,31658914,31658488,31657033,31656400,31655314,31654792,31653867,31653599,31652249 31670431,31668855,31668218,31667628,31666081,31665935,31665618,31665234,31662658,31662387,31661704,31661458,31661119,31660638,31658964,31658577,31657068,31656444,31655502,31654858,31654043,31653676,31652853 Gene ID= ENSG00000084636.17 TPM= 2.17 Transcript Type= NA chr1 31727118 31761010 31727118 31761010 - transcript2510.chr1.nnic@ADGRB2 transcript2510.chr1.nnic protein_coding 31760683,31755999,31744648,31744193,31742838,31742053,31741800,31741624,31741373,31740347,31740110,31739926,31739308,31738832,31738587,31738200,31737652,31737429,31736573,31736321,31735827,31735580,31732972,31732517,31732115,31730800,31728598,31728182,31728025,31727118 31761010,31756815,31744731,31744357,31743002,31742217,31741967,31741725,31741479,31740541,31740178,31740034,31739635,31738937,31738630,31738326,31737755,31737531,31736723,31736390,31735893,31735665,31733143,31732612,31732154,31731419,31728633,31728280,31728081,31727605 Gene ID= ENSG00000121753.12 TPM= 2.72 Transcript Type= NA chr1 31906420 31938441 31906420 31938441 - transcript2513.chr1.nnic@PTP4A2 transcript2513.chr1.nnic protein_coding 31937987,31918970,31915895,31911696,31910038,31908178,31906420 31938441,31919658,31915987,31911826,31910112,31908960,31908136 Gene ID= ENSG00000184007.18 TPM= 65.76 Transcript Type= NA chr1 31906420 31938390 31906420 31938390 - transcript2519.chr1.nnic@PTP4A2 transcript2519.chr1.nnic protein_coding 31937987,31918970,31911696,31910038,31908178,31906420 31938390,31919658,31911826,31910112,31908960,31908136 Gene ID= ENSG00000184007.18 TPM= 12.72 Transcript Type= NA chr1 31906421 31938441 31906421 31938441 - transcript2520.chr1.nic@PTP4A2 transcript2520.chr1.nic protein_coding 31937987,31918970,31915895,31911696,31910038,31906421 31938441,31919658,31915987,31911826,31910112,31908960 Gene ID= ENSG00000184007.18 TPM= 54.89 Transcript Type= NA chr1 31906421 31938390 31906421 31938390 - transcript2524.chr1.nic@PTP4A2 transcript2524.chr1.nic protein_coding 31937987,31918970,31911696,31910038,31906421 31938390,31919658,31911826,31910112,31908960 Gene ID= ENSG00000184007.18 TPM= 12.72 Transcript Type= NA chr1 31906421 31919483 31906421 31919483 - ENST00000602725.5@PTP4A2 ENST00000602725.5 protein_coding 31918970,31915895,31911696,31910038,31906421 31919483,31915987,31911826,31910112,31908960 Gene ID= ENSG00000184007.18 TPM= 8.14 Transcript Type= protein_coding chr1 32013829 32043882 32013829 32043882 + ENST00000327300.11@KHDRBS1 ENST00000327300.11 protein_coding 32013829,32030298,32031524,32033188,32036910,32037835,32038552,32039515,32042527 32014377,32030422,32031640,32033334,32037043,32038036,32038619,32039573,32043882 Gene ID= ENSG00000121774.17 TPM= 172.96 Transcript Type= protein_coding chr1 32072902 32102861 32072902 32102861 + ENST00000336294.9@TMEM39B ENST00000336294.9 protein_coding 32072902,32074951,32075603,32076763,32077164,32091675,32094784,32100442,32102431 32073051,32075077,32075822,32076846,32077318,32092011,32094971,32100562,32102861 Gene ID= ENSG00000121775.17 TPM= 4.07 Transcript Type= protein_coding chr1 32072943 32102866 32072943 32102866 + ENST00000441402.5@TMEM39B ENST00000441402.5 protein_coding 32072943,32074951,32075603,32091675,32094784,32100442,32102431 32073051,32075077,32075822,32092011,32094971,32100562,32102866 Gene ID= ENSG00000121775.17 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr1 32108038 32176568 32108038 32176568 + ENST00000373625.7@KPNA6 ENST00000373625.7 protein_coding 32108038,32154588,32156853,32157346,32158267,32159400,32160615,32161947,32162361,32163235,32166105,32167169,32169882,32170707 32108134,32154721,32156945,32157445,32158361,32159531,32160703,32162046,32162524,32163313,32166230,32167296,32170060,32176568 Gene ID= ENSG00000025800.13 TPM= 57.95 Transcript Type= protein_coding chr1 32179686 32198285 32179686 32198285 + ENST00000373610.7@TXLNA ENST00000373610.7 protein_coding 32179686,32180314,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902 32179776,32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285 Gene ID= ENSG00000084652.15 TPM= 87.39 Transcript Type= protein_coding chr1 32180065 32198285 32180065 32198285 + ENST00000373609.1@TXLNA ENST00000373609.1 protein_coding 32180065,32181242,32184525,32187954,32190055,32192311,32192657,32193208,32194065,32194902 32180514,32181577,32184616,32188124,32190249,32192430,32192731,32193300,32194160,32198285 Gene ID= ENSG00000084652.15 TPM= 82.86 Transcript Type= protein_coding chr1 32200386 32205387 32200386 32205387 + ENST00000373602.9@CCDC28B ENST00000373602.9 protein_coding 32200386,32201913,32203879,32204186,32204598,32205194 32200709,32202099,32204045,32204379,32204620,32205387 Gene ID= ENSG00000160050.14 TPM= 19.92 Transcript Type= protein_coding chr1 32200633 32205387 32200633 32205387 + ENST00000421922.6@CCDC28B ENST00000421922.6 protein_coding 32200633,32201913,32203879,32204186,32204598 32200709,32202099,32204045,32204379,32205387 Gene ID= ENSG00000160050.14 TPM= 1.81 Transcript Type= protein_coding chr1 32205661 32208687 32205661 32208687 + ENST00000291358.10@IQCC ENST00000291358.10 protein_coding 32205661,32206154,32206509,32207002,32207240 32205723,32206297,32206761,32207120,32208687 Gene ID= ENSG00000160051.11 TPM= 2.72 Transcript Type= protein_coding chr1 32216197 32222325 32216197 32222325 - ENST00000309777.10@TMEM234 ENST00000309777.10 protein_coding 32222307,32221867,32221131,32217259,32216197 32222325,32222018,32221197,32217351,32216947 Gene ID= ENSG00000160055.19 TPM= 9.06 Transcript Type= protein_coding chr1 32221791 32231606 32221791 32231606 + transcript2543.chr1.nic@EIF3I transcript2543.chr1.nic protein_coding 32221791,32222358,32222538,32224034,32224410,32226171,32226403,32228499,32228727,32229135,32230927,32231115 32222032,32222444,32222630,32224121,32224475,32226320,32226530,32228609,32228816,32229208,32231019,32231606 Gene ID= ENSG00000084623.11 TPM= 9.06 Transcript Type= NA chr1 32222370 32231604 32222370 32231604 + ENST00000373586.1@EIF3I ENST00000373586.1 protein_coding 32222370,32222538,32224034,32224410,32226171,32226403,32228499,32228727,32229135,32230927,32231115 32222444,32222630,32224121,32224475,32226320,32226530,32228609,32228816,32229208,32231019,32231604 Gene ID= ENSG00000084623.11 TPM= 232.73 Transcript Type= protein_coding chr1 32247233 32248856 32247233 32248856 + ENST00000373582.3@FAM167B ENST00000373582.3 protein_coding 32247233,32248371 32247682,32248856 Gene ID= ENSG00000183615.5 TPM= 17.21 Transcript Type= protein_coding chr1 32292104 32333634 32292104 32333634 + transcript2580.chr1.nic@HDAC1 transcript2580.chr1.nic protein_coding 32292104,32302621,32316665,32324479,32326939,32327536,32329068,32330578,32330768,32331474,32331676,32332090,32332701,32333017 32292218,32302733,32316782,32324553,32327458,32327677,32329160,32330686,32330908,32331582,32331806,32332242,32332749,32333634 Gene ID= ENSG00000116478.11 TPM= 3.38 Transcript Type= NA chr1 32292106 32333634 32292106 32333634 + transcript2584.chr1.nic@HDAC1 transcript2584.chr1.nic protein_coding 32292106,32302621,32316665,32324479,32326939,32327536,32330768,32331474,32331676,32332090,32332701,32333017 32292218,32302733,32316782,32324553,32327077,32330686,32330908,32331582,32331806,32332242,32332749,32333634 Gene ID= ENSG00000116478.11 TPM= 3.98 Transcript Type= NA chr1 32292089 32333634 32292089 32333634 + transcript2585.chr1.nic@HDAC1 transcript2585.chr1.nic protein_coding 32292089,32302621,32316665,32324479,32326939,32330768,32331474,32331676,32332090,32332701,32333017 32292218,32302733,32316782,32324553,32330686,32330908,32331582,32331806,32332242,32332749,32333634 Gene ID= ENSG00000116478.11 TPM= 3.98 Transcript Type= NA chr1 32292086 32333635 32292086 32333635 + ENST00000373548.7@HDAC1 ENST00000373548.7 protein_coding 32292086,32302621,32316665,32324479,32326939,32327536,32329068,32330578,32330768,32331474,32331676,32332090,32332701,32333017 32292218,32302733,32316782,32324553,32327077,32327677,32329160,32330686,32330908,32331582,32331806,32332242,32332749,32333635 Gene ID= ENSG00000116478.11 TPM= 84.88 Transcript Type= protein_coding chr1 32333833 32351999 32333833 32351999 - transcript2591.chr1.nnic@MARCKSL1 transcript2591.chr1.nnic protein_coding 32351610,32343136,32333833 32351999,32343233,32335097 Gene ID= ENSG00000175130.6 TPM= 6.34 Transcript Type= NA chr1 32363421 32394444 32363421 32394444 - transcript2598.chr1.nic@BSDC1 transcript2598.chr1.nic protein_coding 32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368447,32363421 32394444,32394140,32386895,32383939,32381268,32378839,32378283,32378048,32376741,32368550,32366654 Gene ID= ENSG00000160058.18 TPM= 5.43 Transcript Type= NA chr1 32365103 32394448 32365103 32394448 - ENST00000455895.6@BSDC1 ENST00000455895.6 protein_coding 32394404,32394080,32386779,32383830,32381214,32378724,32378215,32377970,32376262,32368447,32365103 32394448,32394140,32386895,32383997,32381268,32378839,32378283,32378048,32376741,32368550,32366654 Gene ID= ENSG00000160058.18 TPM= 143.98 Transcript Type= protein_coding chr1 32620820 32650584 32620820 32650584 - ENST00000468695.5@ZBTB8OS ENST00000468695.5 protein_coding 32650433,32634768,32633951,32633645,32631827,32627508,32620820 32650584,32634792,32634072,32633727,32631879,32627544,32621948 Gene ID= ENSG00000176261.15 TPM= 9.35 Transcript Type= protein_coding chr1 32621830 32650525 32621830 32650525 - ENST00000373501.6@ZBTB8OS ENST00000373501.6 protein_coding 32650433,32634702,32633951,32633645,32631827,32627508,32621830 32650525,32634792,32634072,32633727,32631879,32627544,32621948 Gene ID= ENSG00000176261.15 TPM= 1.2 Transcript Type= protein_coding chr1 32621830 32650560 32621830 32650560 - ENST00000436661.5@ZBTB8OS ENST00000436661.5 protein_coding 32650433,32634768,32633951,32633645,32627508,32621830 32650560,32634792,32634072,32633727,32627544,32621948 Gene ID= ENSG00000176261.15 TPM= 2.11 Transcript Type= protein_coding chr1 32651149 32680651 32651149 32680651 + transcript2626.chr1.nnic@RBBP4 transcript2626.chr1.nnic protein_coding 32651149,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32673483,32679640 32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32673580,32680651 Gene ID= ENSG00000162521.18 TPM= 6.34 Transcript Type= NA chr1 32651148 32686211 32651148 32686211 + ENST00000373493.9@RBBP4 ENST00000373493.9 protein_coding 32651148,32651914,32657427,32668225,32668739,32668972,32669231,32669486,32672450,32672642,32672791,32679640 32651322,32652061,32657572,32668398,32668854,32669132,32669357,32669563,32672526,32672699,32672901,32686211 Gene ID= ENSG00000162521.18 TPM= 143.08 Transcript Type= protein_coding chr1 32741885 32774970 32741885 32774970 + ENST00000401073.6@KIAA1522 ENST00000401073.6 protein_coding 32741885,32767787,32768062,32768652,32769673,32769880,32772865 32742189,32767957,32768117,32768775,32769786,32772441,32774970 Gene ID= ENSG00000162522.10 TPM= 76.07 Transcript Type= protein_coding chr1 32754021 32774970 32754021 32774970 + ENST00000373481.7@KIAA1522 ENST00000373481.7 protein_coding 32754021,32767787,32768062,32768652,32769673,32769880,32772865 32754180,32767957,32768117,32768775,32769786,32772441,32774970 Gene ID= ENSG00000162522.10 TPM= 77.88 Transcript Type= protein_coding chr1 32774776 32817272 32774776 32817272 - transcript2641.chr1.nnic@YARS transcript2641.chr1.nnic protein_coding 32816814,32810911,32810591,32806482,32797763,32791162,32786940,32786362,32782404,32781048,32780085,32779382,32774776 32817272,32811057,32810766,32806611,32797843,32791254,32787075,32786447,32782539,32781145,32780278,32779523,32776091 Gene ID= ENSG00000134684.10 TPM= 18.11 Transcript Type= NA chr1 32817555 32858879 32817555 32858879 + ENST00000373475.9@S100PBP ENST00000373475.9 protein_coding 32817555,32825313,32826098,32827993,32829964,32853079,32855924 32817689,32825429,32826930,32828081,32830067,32853166,32858879 Gene ID= ENSG00000116497.17 TPM= 28.07 Transcript Type= protein_coding chr1 32862268 32870949 32862268 32870949 - transcript2657.chr1.nnic@FNDC5 transcript2657.chr1.nnic protein_coding 32870897,32870653,32868882,32868190,32867753,32864664,32862268 32870949,32870779,32868997,32868388,32867842,32864797,32864483 Gene ID= ENSG00000160097.16 TPM= 3.62 Transcript Type= NA chr1 32862269 32871146 32862269 32871146 - transcript2661.chr1.nic@FNDC5 transcript2661.chr1.nic protein_coding 32870653,32868882,32868190,32867753,32864664,32862269 32871146,32868997,32868388,32867842,32864797,32863776 Gene ID= ENSG00000160097.16 TPM= 32.6 Transcript Type= NA chr1 32894595 32901358 32894595 32901358 - ENST00000373463.7@TMEM54 ENST00000373463.7 protein_coding 32901223,32898126,32895910,32895555,32895305,32894595 32901358,32898319,32895969,32895743,32895439,32894879 Gene ID= ENSG00000121900.18 TPM= 32.6 Transcript Type= protein_coding chr1 33009921 33036909 33009921 33036909 - transcript2673.chr1.nic@AK2 transcript2673.chr1.nic protein_coding 33036736,33024442,33021593,33021367,33014522,33012074,33009921 33036909,33024567,33021703,33021461,33014594,33013402,33010833 Gene ID= ENSG00000004455.16 TPM= 49.8 Transcript Type= NA chr1 33007984 33036870 33007984 33036870 - ENST00000373449.6@AK2 ENST00000373449.6 protein_coding 33036736,33024442,33021593,33021367,33014522,33013207,33007984 33036870,33024567,33021703,33021461,33014594,33013402,33010833 Gene ID= ENSG00000004455.16 TPM= 49.8 Transcript Type= protein_coding chr1 33013044 33036877 33013044 33036877 - ENST00000480134.5@AK2 ENST00000480134.5 protein_coding 33036736,33024442,33021593,33014522,33013044 33036877,33024567,33021703,33014594,33013402 Gene ID= ENSG00000004455.16 TPM= 3.62 Transcript Type= protein_coding chr1 33081137 33120530 33081137 33120530 + transcript2678.chr1.nnic@AZIN2 transcript2678.chr1.nnic protein_coding 33081137,33081388,33082178,33083954,33092050,33093282,33094548,33096707,33098067,33101833,33117902,33120044 33081294,33081508,33082354,33084127,33092222,33093416,33094713,33096869,33098179,33101902,33118116,33120530 Gene ID= ENSG00000142920.16 TPM= 1.81 Transcript Type= NA chr1 33081155 33120530 33081155 33120530 + transcript2682.chr1.nic@AZIN2 transcript2682.chr1.nic protein_coding 33081155,33082178,33083954,33092050,33093282,33094548,33096707,33098067,33117902,33120044 33081508,33082354,33084127,33092222,33093416,33094713,33096869,33098179,33118116,33120530 Gene ID= ENSG00000142920.16 TPM= 3.62 Transcript Type= NA chr1 33081167 33120529 33081167 33120529 + ENST00000373443.7@AZIN2 ENST00000373443.7 protein_coding 33081167,33081391,33082178,33083954,33092050,33093282,33094548,33096707,33098067,33117902,33120044 33081294,33081508,33082354,33084127,33092222,33093416,33094713,33096869,33098179,33118116,33120529 Gene ID= ENSG00000142920.16 TPM= 17.21 Transcript Type= protein_coding chr1 33256185 33300721 33256185 33300721 + transcript2690.chr1.nic@ZNF362 transcript2690.chr1.nic protein_coding 33256185,33276100,33276348,33280124,33281587,33294937,33295147,33298930 33256654,33276163,33276594,33280457,33281811,33295015,33295305,33300721 Gene ID= ENSG00000160094.14 TPM= 33.51 Transcript Type= NA chr1 33323624 33430986 33323624 33430986 - transcript2696.chr1.nnic@PHC2 transcript2696.chr1.nnic protein_coding 33430181,33375366,33372289,33371017,33370421,33368536,33367116,33354838,33354401,33334185,33332275,33331348,33330071,33328870,33323624 33430986,33375593,33372447,33371094,33370585,33368622,33367428,33355253,33354566,33334292,33332404,33331462,33330212,33329146,33325019 Gene ID= ENSG00000134686.18 TPM= 8.41 Transcript Type= NA chr1 33323624 33349946 33323624 33349946 - transcript2711.chr1.nic@PHC2 transcript2711.chr1.nic protein_coding 33349597,33334185,33332275,33331348,33330071,33328870,33323624 33349946,33334292,33332404,33331462,33330212,33329146,33325019 Gene ID= ENSG00000134686.18 TPM= 92.33 Transcript Type= NA chr1 33323626 33349885 33323626 33349885 - ENST00000373418.7@PHC2 ENST00000373418.7 protein_coding 33349597,33334090,33332275,33331348,33330071,33328870,33323626 33349885,33334292,33332404,33331462,33330212,33329146,33325019 Gene ID= ENSG00000134686.18 TPM= 145.15 Transcript Type= protein_coding chr1 33771536 34165228 33771536 34165228 - transcript2715.chr1.nic@CSMD2 transcript2715.chr1.nic protein_coding 34164911,34088977,34032594,33935760,33918094,33846884,33825697,33820469,33819713,33810743,33792423,33788600,33771536 34165228,34089193,34032706,33935954,33918301,33846996,33825774,33820556,33819837,33810864,33792526,33788712,33772751 Gene ID= ENSG00000121904.17 TPM= 1.81 Transcript Type= NA chr1 34792998 34795747 34792998 34795747 + ENST00000342280.4@GJA4 ENST00000342280.4 protein_coding 34792998,34794197 34793068,34795747 Gene ID= ENSG00000187513.8 TPM= 27.17 Transcript Type= protein_coding chr1 34852669 34859816 34852669 34859816 - ENST00000521580.2@SMIM12 ENST00000521580.2 protein_coding 34859677,34852669 34859816,34855982 Gene ID= ENSG00000163866.8 TPM= 95.08 Transcript Type= protein_coding chr1 34865437 34867594 34865437 34867594 - transcript2721.chr1.nic@DLGAP3 transcript2721.chr1.nic protein_coding 34867536,34867048,34865437 34867594,34867191,34866301 Gene ID= ENSG00000116544.11 TPM= 2.72 Transcript Type= NA chr1 34987172 35031740 34987172 35031740 - transcript2725.chr1.nic@AC114490.2 transcript2725.chr1.nic protein_coding 35031631,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34987172 35031740,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935 Gene ID= ENSG00000271741.1 TPM= 4.75 Transcript Type= NA chr1 34987172 35031689 34987172 35031689 - transcript2727.chr1.nic@AC114490.2 transcript2727.chr1.nic protein_coding 35031631,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34987172 35031689,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34990311 Gene ID= ENSG00000271741.1 TPM= 2.04 Transcript Type= NA chr1 34981533 35031741 34981533 35031741 - ENST00000487874.1@AC114490.2 ENST00000487874.1 protein_coding 35031631,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34983767,34981533 35031741,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34983947,34982119 Gene ID= ENSG00000271741.1 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr1 34981535 34985353 34981535 34985353 - ENST00000373337.3@TMEM35B ENST00000373337.3 protein_coding 34985198,34983767,34981535 34985353,34983947,34982119 Gene ID= ENSG00000243749.1 TPM= 63.39 Transcript Type= protein_coding chr1 34986168 35031695 34986168 35031695 - transcript2723.chr1.nic@ZMYM6 transcript2723.chr1.nic protein_coding 35031631,35031267,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34986168 35031695,35031337,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34990311 Gene ID= ENSG00000163867.16 TPM= 1.81 Transcript Type= NA chr1 34986982 35031740 34986982 35031740 - transcript2730.chr1.nic@ZMYM6 transcript2730.chr1.nic protein_coding 35031631,35030547,35020383,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34986982 35031740,35030713,35020467,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935 Gene ID= ENSG00000163867.16 TPM= 2.04 Transcript Type= NA chr1 34986980 35031968 34986980 35031968 - ENST00000357182.8@ZMYM6 ENST00000357182.8 protein_coding 35031815,35030547,35020383,35019353,35014988,35014697,35012431,35011890,35010758,35010447,35008752,35006951,35005132,35003968,34992234,34986980 35031968,35030713,35020467,35019602,35015162,35014888,35012581,35012005,35011036,35010597,35008924,35007098,35005272,35004005,34992387,34988935 Gene ID= ENSG00000163867.16 TPM= 3.85 Transcript Type= protein_coding chr1 35017244 35031905 35017244 35031905 - ENST00000317538.9@ZMYM6 ENST00000317538.9 protein_coding 35031815,35030547,35020383,35017244 35031905,35030713,35020467,35019602 Gene ID= ENSG00000163867.16 TPM= 2.72 Transcript Type= protein_coding chr1 35079367 35115855 35079367 35115855 + ENST00000359858.8@ZMYM1 ENST00000359858.8 protein_coding 35079367,35093914,35095819,35097317,35104295,35104557,35110294,35111772,35112087,35112977 35079442,35094083,35095891,35097566,35104469,35104769,35110447,35111912,35112130,35115855 Gene ID= ENSG00000197056.9 TPM= 2.72 Transcript Type= protein_coding chr1 35079391 35115854 35079391 35115854 + ENST00000373329.5@ZMYM1 ENST00000373329.5 protein_coding 35079391,35095819,35097317,35104295,35104557,35110294,35111772,35112087,35112977 35079442,35095891,35097566,35104469,35104769,35110447,35111912,35112130,35115854 Gene ID= ENSG00000197056.9 TPM= 1.81 Transcript Type= processed_transcript chr1 35176378 35193146 35176378 35193146 - transcript2744.chr1.nic@SFPQ transcript2744.chr1.nic protein_coding 35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35177989,35177319,35176378 35193146,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35178036,35177399,35176474 Gene ID= ENSG00000116560.10 TPM= 40.75 Transcript Type= NA chr1 35182932 35193148 35182932 35193148 - ENST00000357214.5@SFPQ ENST00000357214.5 protein_coding 35192222,35191341,35190694,35190498,35189186,35189003,35187973,35187203,35187001,35182932 35193148,35191529,35190995,35190593,35189382,35189087,35188090,35187251,35187122,35184593 Gene ID= ENSG00000116560.10 TPM= 244.5 Transcript Type= protein_coding chr1 35433492 35557397 35433492 35557397 - transcript2769.chr1.nic@KIAA0319L transcript2769.chr1.nic protein_coding 35557048,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433492 35557397,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 2.83 Transcript Type= NA chr1 35433489 35557405 35433489 35557405 - transcript2771.chr1.nic@KIAA0319L transcript2771.chr1.nic protein_coding 35557362,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433489 35557405,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 9.16 Transcript Type= NA chr1 35431414 35557416 35431414 35557416 - transcript2775.chr1.nic@KIAA0319L transcript2775.chr1.nic protein_coding 35557207,35554350,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35431414 35557416,35554519,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 10.07 Transcript Type= NA chr1 35433491 35557416 35433491 35557416 - transcript2776.chr1.nnic@KIAA0319L transcript2776.chr1.nnic protein_coding 35557207,35554350,35506612,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433491 35557416,35554519,35507135,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 2.83 Transcript Type= NA chr1 35433492 35557416 35433492 35557416 - transcript2781.chr1.nnic@KIAA0319L transcript2781.chr1.nnic protein_coding 35557207,35554350,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433492 35557416,35554519,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 2.83 Transcript Type= NA chr1 35433490 35557413 35433490 35557413 - ENST00000325722.7@KIAA0319L ENST00000325722.7 protein_coding 35557207,35554350,35506612,35478966,35474805,35470863,35466608,35462621,35460305,35456013,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35433490 35557413,35554519,35507135,35479212,35474906,35470960,35466695,35462713,35460437,35456241,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 84.32 Transcript Type= protein_coding chr1 35434105 35454707 35434105 35454707 - ENST00000373266.8@KIAA0319L ENST00000373266.8 protein_coding 35454614,35454362,35453557,35451628,35450358,35449867,35448173,35444161,35442906,35442246,35441047,35434105 35454707,35454485,35453689,35451776,35450509,35450005,35448332,35444303,35443028,35442336,35441138,35435081 Gene ID= ENSG00000142687.17 TPM= 1.01 Transcript Type= protein_coding chr1 35557780 35566784 35557780 35566784 + transcript2790.chr1.nnic@NCDN transcript2790.chr1.nnic protein_coding 35557780,35558156,35559107,35560326,35562392,35562792,35563202,35563767,35565227 35557883,35558223,35559247,35561294,35562633,35562880,35563426,35563909,35566784 Gene ID= ENSG00000020129.15 TPM= 5.89 Transcript Type= NA chr1 35557790 35566784 35557790 35566784 + transcript2792.chr1.nnic@NCDN transcript2792.chr1.nnic protein_coding 35557790,35558156,35559107,35560326,35562392,35563202,35563767,35565227 35557883,35558368,35559247,35561294,35562633,35563426,35563909,35566784 Gene ID= ENSG00000020129.15 TPM= 8.3 Transcript Type= NA chr1 35557792 35566779 35557792 35566779 + ENST00000356090.8@NCDN ENST00000356090.8 protein_coding 35557792,35558156,35559107,35560326,35562392,35563202,35563767,35565227 35557883,35558223,35559247,35561294,35562633,35563426,35563909,35566779 Gene ID= ENSG00000020129.15 TPM= 62.64 Transcript Type= protein_coding chr1 35557808 35566773 35557808 35566773 + ENST00000373243.6@NCDN ENST00000373243.6 protein_coding 35557808,35559107,35560326,35562392,35563202,35563767,35565227 35558223,35559247,35561294,35562633,35563426,35563909,35566773 Gene ID= ENSG00000020129.15 TPM= 16.45 Transcript Type= protein_coding chr1 35601584 35641844 35601584 35641844 - ENST00000373237.3@PSMB2 ENST00000373237.3 protein_coding 35641342,35636310,35631274,35609246,35605233,35601584 35641844,35636432,35631344,35609408,35605282,35603374 Gene ID= ENSG00000126067.11 TPM= 114.1 Transcript Type= protein_coding chr1 35713875 35719472 35713875 35719472 - ENST00000270815.4@C1orf216 ENST00000270815.4 protein_coding 35718707,35713875 35719472,35716326 Gene ID= ENSG00000142686.7 TPM= 60.67 Transcript Type= protein_coding chr1 35807642 35857878 35807642 35857878 + transcript2808.chr1.nnic@AGO4 transcript2808.chr1.nnic protein_coding 35807642,35816882,35822862,35825313,35825679,35825926,35826748,35831427,35831812,35832057,35832437,35833990,35835834,35841165,35841616,35850157,35850854,35853497,35854677,35855702 35807723,35817047,35822982,35825494,35825815,35826060,35826835,35831574,35831931,35832185,35832570,35834174,35835993,35841480,35841750,35850258,35851053,35853702,35854822,35857878 Gene ID= ENSG00000134698.10 TPM= 2.72 Transcript Type= NA chr1 35931082 36056285 35931082 36056285 + transcript2818.chr1.nic@AGO3 transcript2818.chr1.nic protein_coding 35931082,35945692,35966955,35972024,35973375,36004341,36005719,36008690,36008897,36009475,36013630,36013915,36027114,36034174,36036177,36039790,36040307,36043447,36054946,36055637 35931445,35945863,35967075,35972232,35973511,36004475,36005858,36008777,36009044,36009594,36013752,36014048,36027298,36034333,36036267,36039984,36040441,36043548,36055145,36056285 Gene ID= ENSG00000126070.19 TPM= 1.81 Transcript Type= NA chr1 35931078 36072500 35931078 36072500 + ENST00000373191.8@AGO3 ENST00000373191.8 protein_coding 35931078,35945692,35966955,35972024,35973375,36004341,36008690,36008897,36009475,36013630,36013915,36027114,36034174,36036177,36039790,36040307,36043447,36054946,36055637 35931445,35945863,35967075,35972232,35973511,36004475,36008777,36009044,36009594,36013752,36014048,36027298,36034333,36036267,36039984,36040441,36043548,36055145,36072500 Gene ID= ENSG00000126070.19 TPM= 9.06 Transcript Type= protein_coding chr1 35931082 35986373 35931082 35986373 + transcript2822.chr1.nic@AGO3 transcript2822.chr1.nic protein_coding 35931082,35945692,35966955,35972024,35973375,35982621,35984470 35931445,35945863,35967075,35972232,35973511,35982712,35986373 Gene ID= ENSG00000126070.19 TPM= 1.81 Transcript Type= NA chr1 36088875 36093932 36088875 36093932 + ENST00000373178.4@ADPRHL2 ENST00000373178.4 protein_coding 36088875,36091244,36091618,36091910,36092422,36093097 36089115,36091340,36091825,36092094,36092522,36093932 Gene ID= ENSG00000116863.10 TPM= 150.32 Transcript Type= protein_coding chr1 36095236 36125220 36095236 36125220 - ENST00000397799.1@COL8A2 ENST00000397799.1 protein_coding 36125057,36115708,36100050,36095236 36125220,36115752,36100258,36099487 Gene ID= ENSG00000171812.12 TPM= 11.77 Transcript Type= protein_coding chr1 36136570 36149514 36136570 36149514 - ENST00000616074.4@TRAPPC3 ENST00000616074.4 protein_coding 36149337,36137796,36136570 36149514,36137978,36137322 Gene ID= ENSG00000054116.11 TPM= 1.81 Transcript Type= protein_coding chr1 36136572 36149469 36136572 36149469 - ENST00000373166.7@TRAPPC3 ENST00000373166.7 protein_coding 36149337,36140069,36139720,36137796,36136572 36149469,36140166,36139819,36137978,36137322 Gene ID= ENSG00000054116.11 TPM= 22.19 Transcript Type= protein_coding chr1 36136570 36149514 36136570 36149514 - ENST00000616395.4@TRAPPC3 ENST00000616395.4 protein_coding 36149337,36140069,36139720,36137796,36136570 36149514,36140166,36139843,36137978,36137322 Gene ID= ENSG00000054116.11 TPM= 3.17 Transcript Type= protein_coding chr1 36156181 36180849 36156181 36180849 + transcript2839.chr1.nic@MAP7D1 transcript2839.chr1.nic protein_coding 36156181,36170971,36171513,36172464,36173364,36174898,36176199,36176418,36176697,36177873,36178446,36178685,36178921,36179262,36179515,36179666,36179874,36180248 36156463,36171315,36171581,36172627,36173478,36175008,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849 Gene ID= ENSG00000116871.15 TPM= 3.83 Transcript Type= NA chr1 36156155 36180849 36156155 36180849 + transcript2844.chr1.nic@MAP7D1 transcript2844.chr1.nic protein_coding 36156155,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178446,36178685,36178921,36179262,36179515,36179666,36179874,36180248 36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849 Gene ID= ENSG00000116871.15 TPM= 5.64 Transcript Type= NA chr1 36156180 36180849 36156180 36180849 + transcript2845.chr1.nic@MAP7D1 transcript2845.chr1.nic protein_coding 36156180,36170971,36171513,36172464,36173364,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248 36156463,36171315,36171581,36172627,36173478,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849 Gene ID= ENSG00000116871.15 TPM= 11.07 Transcript Type= NA chr1 36155965 36180849 36155965 36180849 + ENST00000316156.8@MAP7D1 ENST00000316156.8 protein_coding 36155965,36170971,36171513,36172464,36173364,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248 36156463,36171315,36171581,36172627,36173478,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849 Gene ID= ENSG00000116871.15 TPM= 13.79 Transcript Type= protein_coding chr1 36156198 36180849 36156198 36180849 + ENST00000373150.8@MAP7D1 ENST00000373150.8 protein_coding 36156198,36170971,36171513,36172464,36173364,36174898,36176199,36176418,36176697,36177873,36178419,36178685,36178921,36179262,36179515,36179666,36179874,36180248 36156463,36171315,36171581,36172627,36173478,36175008,36176321,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180849 Gene ID= ENSG00000116871.15 TPM= 42.77 Transcript Type= protein_coding chr1 36156202 36180840 36156202 36180840 + ENST00000373151.6@MAP7D1 ENST00000373151.6 protein_coding 36156202,36170971,36171513,36172464,36173364,36174898,36176199,36176697,36177873,36178419,36178685,36178921,36179262,36179512,36179666,36179874,36180248 36156463,36171315,36171581,36172627,36173478,36175008,36176581,36176842,36178201,36178596,36178823,36179025,36179315,36179557,36179756,36180067,36180840 Gene ID= ENSG00000116871.15 TPM= 32.45 Transcript Type= protein_coding chr1 36224417 36305354 36224417 36305354 + transcript2860.chr1.nnic@THRAP3 transcript2860.chr1.nnic protein_coding 36224417,36259382,36282533,36286368,36289060,36291374,36292598,36293851,36294050,36296583,36300886,36301553,36303796 36224505,36259484,36282700,36287270,36289764,36291546,36292709,36293935,36294241,36296770,36301084,36301696,36305354 Gene ID= ENSG00000054118.13 TPM= 2.11 Transcript Type= NA chr1 36224416 36305357 36224416 36305357 + ENST00000354618.9@THRAP3 ENST00000354618.9 protein_coding 36224416,36259382,36282533,36286368,36289060,36291374,36292598,36293851,36296583,36300886,36301553,36303796 36224505,36259484,36282700,36287270,36289764,36291546,36292709,36293935,36296770,36301084,36301696,36305357 Gene ID= ENSG00000054118.13 TPM= 11.17 Transcript Type= protein_coding chr1 36224434 36305354 36224434 36305354 + transcript2863.chr1.nnic@THRAP3 transcript2863.chr1.nnic protein_coding 36224434,36282533,36286368,36289060,36291374,36292598,36293851,36296583,36300886,36301553,36303796 36224505,36282700,36287270,36289764,36291546,36292709,36293935,36296770,36301084,36301696,36305354 Gene ID= ENSG00000054118.13 TPM= 3.02 Transcript Type= NA chr1 36295992 36305354 36295992 36305354 + transcript2867.chr1.nic@THRAP3 transcript2867.chr1.nic protein_coding 36295992,36300886,36301553,36303796 36296770,36301084,36301696,36305354 Gene ID= ENSG00000054118.13 TPM= 19.92 Transcript Type= NA chr1 36339622 36385924 36339622 36385924 - transcript2876.chr1.nic@STK40 transcript2876.chr1.nic protein_coding 36385723,36367852,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339622 36385924,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973 Gene ID= ENSG00000196182.10 TPM= 4.83 Transcript Type= NA chr1 36339624 36385896 36339624 36385896 - ENST00000373132.3@STK40 ENST00000373132.3 protein_coding 36385723,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624 36385896,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973 Gene ID= ENSG00000196182.10 TPM= 38.33 Transcript Type= protein_coding chr1 36339624 36385884 36339624 36385884 - ENST00000373129.7@STK40 ENST00000373129.7 protein_coding 36385723,36367848,36361221,36358737,36358239,36355206,36354364,36348700,36344120,36343860,36343364,36339624 36385884,36368084,36361340,36358822,36358382,36355433,36354416,36348815,36344264,36343979,36343448,36341973 Gene ID= ENSG00000196182.10 TPM= 5.73 Transcript Type= protein_coding chr1 36393430 36397892 36393430 36397892 - ENST00000315732.2@LSM10 ENST00000315732.2 protein_coding 36397767,36393430 36397892,36394153 Gene ID= ENSG00000181817.5 TPM= 24.45 Transcript Type= protein_coding chr1 36417906 36450451 36417906 36450451 - ENST00000235532.9@OSCP1 ENST00000235532.9 protein_coding 36450258,36438756,36432422,36431802,36423363,36422768,36422150,36420476,36418991,36417906 36450451,36438910,36432589,36431882,36423466,36422896,36422219,36420615,36419054,36418255 Gene ID= ENSG00000116885.18 TPM= 14.49 Transcript Type= protein_coding chr1 36466043 36483278 36466043 36483278 - ENST00000373106.5@CSF3R ENST00000373106.5 protein_coding 36482811,36481478,36479433,36475377,36473764,36473435,36472517,36472238,36472066,36471433,36469652,36469156,36468075,36467822,36467558,36467230,36466043 36483278,36481537,36479516,36475673,36473887,36473622,36472686,36472391,36472139,36471646,36469840,36469257,36468221,36467962,36467651,36467311,36466827 Gene ID= ENSG00000119535.17 TPM= 4.53 Transcript Type= protein_coding chr1 36468750 36482913 36468750 36482913 - transcript2892.chr1.nic@CSF3R transcript2892.chr1.nic protein_coding 36482811,36481478,36479433,36475377,36473764,36473435,36472517,36472238,36472066,36471433,36469652,36468750 36482913,36481537,36479516,36475673,36473887,36473622,36472686,36472391,36472139,36471646,36469840,36469257 Gene ID= ENSG00000119535.17 TPM= 2.72 Transcript Type= NA chr1 37454879 37474411 37454879 37474411 - ENST00000424989.1@LINC01137 ENST00000424989.1 antisense_RNA 37474144,37456367,37454879 37474411,37456459,37455912 Gene ID= ENSG00000233621.1 TPM= 13.58 Transcript Type= antisense_RNA chr1 37474552 37484379 37474552 37484379 + ENST00000373087.6@ZC3H12A ENST00000373087.6 protein_coding 37474552,37475459,37480290,37481601,37482434,37482737 37474629,37475939,37480429,37481835,37482540,37484379 Gene ID= ENSG00000163874.10 TPM= 24.15 Transcript Type= protein_coding chr1 37474581 37484375 37474581 37484375 + transcript2899.chr1.nic@ZC3H12A transcript2899.chr1.nic protein_coding 37474581,37475459,37480290,37481601,37482434 37474629,37475939,37480429,37481835,37484375 Gene ID= ENSG00000163874.10 TPM= 5.13 Transcript Type= NA chr1 37474580 37484360 37474580 37484360 + ENST00000640233.1@ZC3H12A ENST00000640233.1 protein_coding 37474580,37475459,37480290,37481601,37482350,37482737 37474629,37475939,37480429,37481835,37482540,37484360 Gene ID= ENSG00000163874.10 TPM= 1.51 Transcript Type= nonsense_mediated_decay chr1 37492575 37514763 37492575 37514763 - ENST00000373075.6@MEAF6 ENST00000373075.6 protein_coding 37514657,37513423,37509455,37509278,37501804,37496707,37495885,37492575 37514763,37513538,37509542,37509323,37501996,37496736,37495918,37494107 Gene ID= ENSG00000163875.15 TPM= 6.34 Transcript Type= protein_coding chr1 37493178 37514774 37493178 37514774 - ENST00000296214.9@MEAF6 ENST00000296214.9 protein_coding 37514657,37513423,37509455,37509278,37501804,37495885,37493178 37514774,37513538,37509542,37509323,37501996,37495918,37494107 Gene ID= ENSG00000163875.15 TPM= 43.47 Transcript Type= protein_coding chr1 37493335 37514756 37493335 37514756 - ENST00000475828.5@MEAF6 ENST00000475828.5 protein_coding 37514657,37513423,37509455,37509278,37501804,37496547,37495885,37493335 37514756,37513538,37509542,37509323,37501996,37496604,37495918,37494107 Gene ID= ENSG00000163875.15 TPM= 4.53 Transcript Type= processed_transcript chr1 37534449 37554344 37534449 37554344 - ENST00000296215.7@SNIP1 ENST00000296215.7 protein_coding 37554006,37552645,37540157,37534449 37554344,37552747,37540755,37538012 Gene ID= ENSG00000163877.10 TPM= 3.62 Transcript Type= protein_coding chr1 37556919 37566857 37556919 37566857 + ENST00000296218.7@DNALI1 ENST00000296218.7 protein_coding 37556919,37557603,37559327,37561557,37562081,37565026 37557075,37557748,37559496,37561735,37562245,37566857 Gene ID= ENSG00000163879.10 TPM= 8.15 Transcript Type= protein_coding chr1 37556998 37566858 37556998 37566858 + transcript2912.chr1.nic@DNALI1 transcript2912.chr1.nic protein_coding 37556998,37557603,37561557,37562081,37565026 37557075,37557748,37561735,37562245,37566858 Gene ID= ENSG00000163879.10 TPM= 1.81 Transcript Type= NA chr1 37566816 37595921 37566816 37595921 - ENST00000373062.7@GNL2 ENST00000373062.7 protein_coding 37595759,37593762,37592712,37590706,37587311,37583867,37582778,37582223,37576428,37575595,37574665,37574343,37568851,37568275,37567673,37566816 37595921,37593846,37592806,37590845,37587495,37583933,37582936,37582336,37576556,37575699,37574823,37574456,37569302,37568357,37567764,37567007 Gene ID= ENSG00000134697.12 TPM= 32.6 Transcript Type= protein_coding chr1 37681568 37690537 37681568 37690537 - transcript2916.chr1.nic@C1orf109 transcript2916.chr1.nic protein_coding 37690002,37689606,37686273,37683319,37681568 37690537,37689883,37686452,37683437,37683160 Gene ID= ENSG00000116922.14 TPM= 6.34 Transcript Type= NA chr1 37681570 37690520 37681570 37690520 - ENST00000358011.8@C1orf109 ENST00000358011.8 protein_coding 37690334,37689606,37686273,37683319,37681570 37690520,37689883,37686452,37683437,37683160 Gene ID= ENSG00000116922.14 TPM= 5.43 Transcript Type= protein_coding chr1 37794112 37801131 37794112 37801131 + transcript2924.chr1.nnic@MANEAL transcript2924.chr1.nnic protein_coding 37794112,37795737,37799844 37794732,37795846,37801131 Gene ID= ENSG00000185090.14 TPM= 2.72 Transcript Type= NA chr1 37793802 37801133 37793802 37801133 + ENST00000373045.10@MANEAL ENST00000373045.10 protein_coding 37793802,37795737,37796744,37799567 37794732,37795846,37796820,37801133 Gene ID= ENSG00000185090.14 TPM= 10.87 Transcript Type= protein_coding chr1 37802944 37808185 37802944 37808185 - ENST00000373044.2@YRDC ENST00000373044.2 protein_coding 37807792,37807101,37806857,37804302,37802944 37808185,37807215,37806976,37804444,37803997 Gene ID= ENSG00000196449.3 TPM= 28.98 Transcript Type= protein_coding chr1 37807747 37809449 37807747 37809449 + ENST00000468084.1@C1orf122 ENST00000468084.1 protein_coding 37807747,37808531,37808978 37808306,37808732,37809449 Gene ID= ENSG00000197982.13 TPM= 82.4 Transcript Type= protein_coding chr1 37860697 37947109 37860697 37947109 - transcript2930.chr1.nnic@INPP5B transcript2930.chr1.nnic protein_coding 37946990,37946258,37945756,37943796,37943640,37940688,37931913,37891358,37889557,37888243,37887351,37886888,37885638,37882807,37880085,37878188,37875606,37873993,37872930,37868501,37866459,37865761,37864312,37860697 37947109,37946334,37945856,37943893,37943669,37940798,37932053,37891454,37889724,37888344,37887465,37887004,37885825,37882918,37880194,37878323,37875716,37874155,37873165,37868614,37866543,37865888,37864423,37862430 Gene ID= ENSG00000204084.12 TPM= 6.34 Transcript Type= NA chr1 37862085 37947051 37862085 37947051 - ENST00000373024.7@INPP5B ENST00000373024.7 protein_coding 37946990,37946252,37945756,37943796,37943640,37940688,37931913,37891358,37889557,37888243,37887351,37886888,37885638,37882807,37880085,37878188,37875606,37873993,37872930,37868501,37866459,37865761,37864312,37862085 37947051,37946334,37945850,37943893,37943669,37940798,37932053,37891454,37889724,37888344,37887465,37887004,37885825,37882918,37880194,37878323,37875716,37874155,37873165,37868614,37866543,37865888,37864423,37862430 Gene ID= ENSG00000204084.12 TPM= 2.72 Transcript Type= protein_coding chr1 37956982 37996077 37956982 37996077 - transcript2936.chr1.nnic@SF3A3 transcript2936.chr1.nnic protein_coding 37995906,37989870,37989548,37987784,37987573,37984707,37984169,37981729,37980586,37979465,37978988,37978720,37976884,37969571,37969354,37968044,37960120,37956982 37996077,37990602,37989595,37987836,37987678,37984779,37984260,37981811,37980724,37979533,37979055,37978827,37976953,37969735,37969464,37968134,37960175,37958263 Gene ID= ENSG00000183431.11 TPM= 63.39 Transcript Type= NA chr1 37996770 38005505 37996770 38005505 - ENST00000373016.3@FHL3 ENST00000373016.3 protein_coding 38005357,37999257,37998974,37997963,37997684,37996770 38005505,37999432,37999148,37998132,37997870,37997559 Gene ID= ENSG00000183386.9 TPM= 16.3 Transcript Type= protein_coding chr1 38012742 38024824 38012742 38024824 + ENST00000373014.4@UTP11 ENST00000373014.4 protein_coding 38012742,38016359,38017668,38018464,38019059,38019253,38022699,38023545 38012865,38016420,38017770,38018577,38019152,38019383,38022809,38024824 Gene ID= ENSG00000183520.11 TPM= 48.9 Transcript Type= protein_coding chr1 38838198 38859823 38838198 38859823 - ENST00000373001.3@RRAGC ENST00000373001.3 protein_coding 38859410,38856879,38855708,38852374,38851615,38845939,38838198 38859823,38857082,38855907,38852488,38851757,38846087,38839704 Gene ID= ENSG00000116954.7 TPM= 41.66 Transcript Type= protein_coding chr1 38859899 38919426 38859899 38919426 + transcript2951.chr1.nnic@AL139260.1 transcript2951.chr1.nnic antisense_RNA 38859899,38913540,38915153,38919174 38860239,38913628,38915267,38919426 Gene ID= ENSG00000228436.2 TPM= 1.81 Transcript Type= NA chr1 38991223 39006059 38991223 39006059 + ENST00000432648.7@AKIRIN1 ENST00000432648.7 protein_coding 38991223,38998171,39000972,39003347,39004045 38991600,38998311,39001106,39003418,39006059 Gene ID= ENSG00000174574.15 TPM= 115.91 Transcript Type= protein_coding chr1 39026318 39034636 39026318 39034636 + ENST00000372969.7@NDUFS5 ENST00000372969.7 protein_coding 39026318,39028723,39034392 39026402,39028940,39034636 Gene ID= ENSG00000168653.10 TPM= 204.65 Transcript Type= protein_coding chr1 39331138 39486987 39331138 39486987 + ENST00000289893.8@MACF1 ENST00000289893.8 protein_coding 39331138,39337182,39340502,39340804,39346977,39349478,39350785,39353007,39357375,39358697,39359141,39360793,39361360,39368148,39370030,39372479,39378461,39379203,39380244,39381953,39385434,39387187,39422374,39422730,39424028,39427455,39427961,39429242,39429827,39430702,39432535,39433048,39434414,39435558,39436482,39437777,39439274,39441003,39441224,39441952,39442147,39442412,39442714,39443446,39444662,39447432,39447692,39448033,39448594,39451052,39452156,39452684,39453707,39454909,39458370,39459086,39460632,39461883,39463612,39465095,39468615,39479798,39484601,39485538 39336653,39337331,39340717,39340953,39347210,39349627,39351018,39353231,39357893,39358873,39359264,39361001,39361677,39368314,39370186,39372596,39378523,39379444,39380373,39382152,39385929,39388658,39422535,39422900,39424194,39427614,39428287,39429326,39430068,39430908,39432654,39433155,39434632,39435761,39436490,39438008,39439500,39441125,39441325,39442053,39442320,39442567,39442911,39443574,39444835,39447587,39447898,39448152,39448763,39451211,39452350,39452812,39453850,39455097,39458490,39459249,39460794,39462037,39463686,39465112,39468732,39480009,39484730,39486987 Gene ID= ENSG00000127603.24 TPM= 6.34 Transcript Type= protein_coding chr1 39546837 39557035 39546837 39557035 - transcript2970.chr1.nnic@PPIEL transcript2970.chr1.nnic unprocessed_pseudogene 39556599,39554351,39553118,39546837 39557035,39554392,39553146,39548951 Gene ID= ENSG00000243970.1 TPM= 1.81 Transcript Type= NA chr1 39560816 39576869 39560816 39576869 - transcript2975.chr1.nic@PABPC4 transcript2975.chr1.nic protein_coding 39576552,39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563836,39563614,39562323,39562073,39561685,39560816 39576869,39576223,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122 Gene ID= ENSG00000090621.13 TPM= 11.41 Transcript Type= NA chr1 39560816 39576869 39560816 39576869 - transcript2976.chr1.nic@PABPC4 transcript2976.chr1.nic protein_coding 39576552,39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564471,39563836,39563614,39562323,39562073,39561685,39560816 39576869,39576223,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122 Gene ID= ENSG00000090621.13 TPM= 6.43 Transcript Type= NA chr1 39560816 39576894 39560816 39576894 - transcript2979.chr1.nic@PABPC4 transcript2979.chr1.nic protein_coding 39575759,39572393,39571097,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563836,39563614,39562323,39562073,39561685,39560816 39576894,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122 Gene ID= ENSG00000090621.13 TPM= 8.69 Transcript Type= NA chr1 39560816 39576744 39560816 39576744 - ENST00000372857.7@PABPC4 ENST00000372857.7 protein_coding 39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564471,39563836,39563614,39562323,39562073,39561685,39560816 39576744,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563922,39563741,39562416,39562203,39561787,39561122 Gene ID= ENSG00000090621.13 TPM= 26.35 Transcript Type= protein_coding chr1 39560816 39576751 39560816 39576751 - ENST00000372856.7@PABPC4 ENST00000372856.7 protein_coding 39575759,39572393,39571234,39569863,39569595,39568802,39567751,39565106,39564686,39564423,39563614,39562323,39562073,39561685,39560816 39576751,39572586,39571349,39570002,39569689,39568939,39567846,39565378,39564773,39564542,39563741,39562416,39562203,39561787,39561122 Gene ID= ENSG00000090621.13 TPM= 3.26 Transcript Type= protein_coding chr1 39738882 39753707 39738882 39753707 + ENST00000324379.9@PPIE ENST00000324379.9 protein_coding 39738882,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39753287 39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753707 Gene ID= ENSG00000084072.16 TPM= 43.47 Transcript Type= protein_coding chr1 39738885 39763914 39738885 39763914 + ENST00000356511.6@PPIE ENST00000356511.6 protein_coding 39738885,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39763689 39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39763914 Gene ID= ENSG00000084072.16 TPM= 4.53 Transcript Type= protein_coding chr1 39738908 39753716 39738908 39753716 + ENST00000475350.5@PPIE ENST00000475350.5 protein_coding 39738908,39740165,39741366,39741895,39743216,39743824,39745414,39748903,39752910,39753287 39738923,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39753716 Gene ID= ENSG00000084072.16 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr1 39738901 39763914 39738901 39763914 + ENST00000372830.5@PPIE ENST00000372830.5 protein_coding 39738901,39740165,39741366,39741895,39743216,39743824,39745375,39748903,39752910,39762517,39763689 39738931,39740263,39741409,39741921,39743297,39743924,39745498,39749088,39753052,39762651,39763914 Gene ID= ENSG00000084072.16 TPM= 3.62 Transcript Type= protein_coding chr1 39841036 39883506 39841036 39883506 - transcript3002.chr1.nic@TRIT1 transcript3002.chr1.nic protein_coding 39883318,39857277,39853970,39850119,39847986,39847548,39847220,39844531,39844101,39841036 39883506,39857417,39854068,39850261,39848097,39847660,39847297,39844640,39844218,39841913 Gene ID= ENSG00000043514.15 TPM= 1.81 Transcript Type= NA chr1 39841051 39883506 39841051 39883506 - ENST00000316891.9@TRIT1 ENST00000316891.9 protein_coding 39883318,39857277,39853970,39852731,39850119,39847986,39847548,39847220,39844531,39844101,39841051 39883506,39857417,39854068,39852876,39850261,39848097,39847660,39847297,39844640,39844218,39841913 Gene ID= ENSG00000043514.15 TPM= 10.87 Transcript Type= protein_coding chr1 40040761 40072271 40040761 40072271 + ENST00000372805.7@CAP1 ENST00000372805.7 protein_coding 40040761,40059337,40060067,40061735,40064227,40064474,40066215,40067540,40069690,40070159,40070430,40070836,40071450 40040801,40059458,40060170,40061812,40064370,40064559,40066320,40067717,40069874,40070282,40070512,40070979,40072271 Gene ID= ENSG00000131236.16 TPM= 16 Transcript Type= protein_coding chr1 40071461 40097727 40071461 40097727 - ENST00000642050.1@PPT1 ENST00000642050.1 protein_coding 40097115,40092398,40092045,40091329,40089410,40080397,40078560,40076842,40071461 40097727,40092507,40092172,40091399,40089512,40080487,40078658,40076913,40074183 Gene ID= ENSG00000131238.17 TPM= 132.21 Transcript Type= protein_coding chr1 40072729 40097252 40072729 40097252 - ENST00000439754.6@PPT1 ENST00000439754.6 protein_coding 40097115,40092398,40092045,40091329,40089410,40080397,40078560,40072729 40097252,40092507,40092172,40091399,40089512,40080487,40078658,40074183 Gene ID= ENSG00000131238.17 TPM= 6.34 Transcript Type= protein_coding chr1 40258107 40294184 40258107 40294184 + ENST00000372759.3@ZMPSTE24 ENST00000372759.3 protein_coding 40258107,40260839,40267786,40268419,40269975,40271894,40281343,40285925,40290854,40292445 40258394,40260985,40267872,40268535,40270127,40272035,40281527,40286029,40290997,40294184 Gene ID= ENSG00000084073.8 TPM= 111.38 Transcript Type= protein_coding chr1 40300488 40316102 40300488 40316102 - transcript3027.chr1.nic@COL9A2 transcript3027.chr1.nic protein_coding 40315845,40315590,40314352,40314205,40312731,40312574,40312456,40312059,40311662,40311500,40311230,40311093,40310714,40310264,40310111,40309938,40308192,40307703,40307446,40306143,40305715,40304794,40304476,40304320,40304064,40303928,40303807,40303530,40303131,40302621,40301812,40300488 40316102,40315664,40314387,40314267,40312784,40312609,40312479,40312112,40311715,40311547,40311286,40311146,40310767,40310317,40310164,40309991,40308245,40307756,40307499,40306187,40305768,40304847,40304529,40304391,40304099,40303972,40303839,40303676,40303185,40302809,40301889,40301381 Gene ID= ENSG00000049089.13 TPM= 4.46 Transcript Type= NA chr1 40300487 40317294 40300487 40317294 - ENST00000372748.7@COL9A2 ENST00000372748.7 protein_coding 40317123,40315590,40314352,40314205,40312731,40312574,40312456,40312059,40311662,40311500,40311230,40311093,40310714,40310264,40310111,40309938,40308192,40307703,40307446,40306143,40305715,40304794,40304476,40304320,40304064,40303928,40303807,40303530,40303131,40302621,40301812,40300487 40317294,40315664,40314387,40314267,40312784,40312609,40312479,40312112,40311715,40311547,40311286,40311146,40310767,40310317,40310164,40309991,40308245,40307756,40307499,40306187,40305768,40304847,40304529,40304391,40304099,40303972,40303839,40303676,40303185,40302809,40301889,40301381 Gene ID= ENSG00000049089.13 TPM= 2.64 Transcript Type= protein_coding chr1 40300488 40315410 40300488 40315410 - transcript3029.chr1.nic@COL9A2 transcript3029.chr1.nic protein_coding 40315238,40314352,40314205,40312731,40312574,40312456,40312059,40311662,40311500,40311230,40311093,40310714,40310264,40310111,40309938,40308192,40307703,40307446,40306143,40305715,40304794,40304476,40304320,40304064,40303928,40303807,40303530,40303131,40302621,40301812,40300488 40315410,40314387,40314267,40312784,40312609,40312479,40312112,40311715,40311547,40311286,40311146,40310767,40310317,40310164,40309991,40308245,40307756,40307499,40306187,40305768,40304847,40304529,40304391,40304099,40303972,40303839,40303676,40303185,40302809,40301889,40301381 Gene ID= ENSG00000049089.13 TPM= 2.64 Transcript Type= NA chr1 40300488 40315945 40300488 40315945 - transcript3032.chr1.nnic@COL9A2 transcript3032.chr1.nnic protein_coding 40315845,40315590,40314352,40314205,40312731,40312574,40312456,40312059,40311662,40311500,40311230,40311093,40310714,40310264,40310111,40309938,40308192,40307703,40307446,40306143,40305715,40304476,40304320,40304064,40303928,40303807,40303530,40303131,40302621,40301812,40300488 40315945,40315664,40314387,40314267,40312784,40312609,40312479,40312112,40311715,40311547,40311286,40311146,40310767,40310317,40310164,40309991,40308245,40307756,40307499,40306187,40305768,40304847,40304391,40304099,40303972,40303839,40303686,40303185,40302809,40301889,40301381 Gene ID= ENSG00000049089.13 TPM= 2.04 Transcript Type= NA chr1 40344822 40423329 40344822 40423329 + transcript3039.chr1.nic@SMAP2 transcript3039.chr1.nic protein_coding 40344822,40362300,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976 40344910,40362436,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423329 Gene ID= ENSG00000084070.11 TPM= 1.81 Transcript Type= NA chr1 40374648 40423326 40374648 40423326 + ENST00000372708.5@SMAP2 ENST00000372708.5 protein_coding 40374648,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976 40374708,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423326 Gene ID= ENSG00000084070.11 TPM= 1.81 Transcript Type= protein_coding chr1 40373697 40423326 40373697 40423326 + ENST00000372718.7@SMAP2 ENST00000372718.7 protein_coding 40373697,40406736,40408653,40409757,40413016,40414159,40415272,40416176,40416780,40421976 40374223,40406869,40408738,40409835,40413102,40414240,40415381,40416341,40417096,40423326 Gene ID= ENSG00000084070.11 TPM= 53.43 Transcript Type= protein_coding chr1 40477215 40496343 40477215 40496343 + ENST00000372706.5@ZFP69 ENST00000372706.5 protein_coding 40477215,40479036,40481763,40489088,40489529,40494921 40477894,40479488,40481854,40489214,40489624,40496343 Gene ID= ENSG00000187815.9 TPM= 2.72 Transcript Type= protein_coding chr1 40508761 40516556 40508761 40516556 + ENST00000296380.8@EXO5 ENST00000296380.8 protein_coding 40508761,40509733,40514515 40508877,40509790,40516556 Gene ID= ENSG00000164002.11 TPM= 1.81 Transcript Type= protein_coding chr1 40531561 40548169 40531561 40548169 + ENST00000372699.7@ZNF684 ENST00000372699.7 protein_coding 40531561,40533143,40540586,40541615,40546562 40531787,40533181,40540712,40541710,40548169 Gene ID= ENSG00000117010.15 TPM= 4.53 Transcript Type= protein_coding chr1 40691598 40771601 40691598 40771601 + transcript3069.chr1.nic@NFYC transcript3069.chr1.nic protein_coding 40691598,40738836,40747534,40749573,40753151,40758121,40762888,40766596,40769356,40770397 40691867,40738948,40747605,40749686,40753246,40758294,40763046,40766703,40769415,40771601 Gene ID= ENSG00000066136.20 TPM= 7.24 Transcript Type= NA chr1 40691709 40771603 40691709 40771603 + ENST00000447388.7@NFYC ENST00000447388.7 protein_coding 40691709,40738836,40747534,40749573,40753151,40758121,40762888,40766596,40769356,40770709 40691867,40738948,40747605,40749686,40753246,40758294,40763046,40766703,40769415,40771603 Gene ID= ENSG00000066136.20 TPM= 32.6 Transcript Type= protein_coding chr1 40861051 40862366 40861051 40862366 - ENST00000372638.3@CITED4 ENST00000372638.3 protein_coding 40861051 40862366 Gene ID= ENSG00000179862.6 TPM= 238.16 Transcript Type= protein_coding chr1 40979335 41012565 40979335 41012565 + ENST00000372621.8@CTPS1 ENST00000372621.8 protein_coding 40979335,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658 40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012565 Gene ID= ENSG00000171793.13 TPM= 41.5 Transcript Type= protein_coding chr1 40979998 41012564 40979998 41012564 + transcript3076.chr1.nic@CTPS1 transcript3076.chr1.nic protein_coding 40979998,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41008794,41009445,41010161,41011658 40980561,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008714,41008890,41009589,41010254,41012564 Gene ID= ENSG00000171793.13 TPM= 2.56 Transcript Type= NA chr1 40979639 41012564 40979639 41012564 + transcript3077.chr1.nic@CTPS1 transcript3077.chr1.nic protein_coding 40979639,40983278,40984821,40987372,40988594,40991165,40991765,40995917,40997394,41001029,41002160,41003114,41006051,41007449,41008659,41009445,41010161,41011658 40979829,40983456,40984991,40987472,40988710,40991248,40991845,40996068,40997526,41001117,41002254,41003176,41006094,41007545,41008890,41009589,41010254,41012564 Gene ID= ENSG00000171793.13 TPM= 2.11 Transcript Type= NA chr1 41027200 41242139 41027200 41242139 - transcript3086.chr1.nic@SCMH1 transcript3086.chr1.nic protein_coding 41242059,41186121,41161364,41160875,41159725,41152599,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027200 41242139,41186250,41161432,41160898,41159933,41152741,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319 Gene ID= ENSG00000010803.16 TPM= 4.6 Transcript Type= NA chr1 41027200 41242569 41027200 41242569 - transcript3091.chr1.nic@SCMH1 transcript3091.chr1.nic protein_coding 41242059,41186121,41161364,41160875,41159725,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027200 41242569,41186250,41161432,41160898,41159933,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319 Gene ID= ENSG00000010803.16 TPM= 7.32 Transcript Type= NA chr1 41027200 41242333 41027200 41242333 - transcript3095.chr1.nic@SCMH1 transcript3095.chr1.nic protein_coding 41242059,41186121,41161364,41160875,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027200 41242333,41186250,41161432,41160898,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319 Gene ID= ENSG00000010803.16 TPM= 5.51 Transcript Type= NA chr1 41027200 41242311 41027200 41242311 - transcript3100.chr1.nic@SCMH1 transcript3100.chr1.nic protein_coding 41242059,41186121,41161364,41160875,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41033983,41028584,41027200 41242311,41186250,41161432,41160898,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41034048,41028726,41028319 Gene ID= ENSG00000010803.16 TPM= 5.51 Transcript Type= NA chr1 41027202 41242116 41027202 41242116 - ENST00000372597.5@SCMH1 ENST00000372597.5 protein_coding 41242059,41186121,41161364,41160875,41159725,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202 41242116,41186250,41161432,41160898,41159933,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319 Gene ID= ENSG00000010803.16 TPM= 2.11 Transcript Type= protein_coding chr1 41027202 41242116 41027202 41242116 - ENST00000372596.5@SCMH1 ENST00000372596.5 protein_coding 41242059,41186121,41161364,41160875,41159725,41151614,41142878,41116922,41113283,41075219,41070595,41048690,41046407,41037362,41028584,41027202 41242116,41186250,41161432,41160898,41159933,41151684,41143112,41117010,41113526,41075451,41070721,41048890,41046598,41037541,41028726,41028319 Gene ID= ENSG00000010803.16 TPM= 3.02 Transcript Type= protein_coding chr1 41845576 42036017 41845576 42036017 - transcript3113.chr1.nnic@HIVEP3 transcript3113.chr1.nnic protein_coding 42035807,41848871,41845576 42036017,41849089,41848445 Gene ID= ENSG00000127124.14 TPM= 2.72 Transcript Type= NA chr1 41847191 42035925 41847191 42035925 - ENST00000489103.5@HIVEP3 ENST00000489103.5 protein_coding 42035807,41918413,41848871,41847191 42035925,41918524,41849089,41848445 Gene ID= ENSG00000127124.14 TPM= 2.72 Transcript Type= processed_transcript chr1 42176545 42335232 42176545 42335232 - ENST00000361346.5@FOXJ3 ENST00000361346.5 protein_coding 42335059,42311050,42278348,42265115,42227883,42205762,42199102,42194890,42191303,42189303,42188737,42181917,42176545 42335232,42311110,42278672,42265189,42227966,42205863,42199230,42195064,42191719,42189404,42188928,42182024,42179825 Gene ID= ENSG00000198815.8 TPM= 5.89 Transcript Type= protein_coding chr1 42176545 42335215 42176545 42335215 - ENST00000361776.5@FOXJ3 ENST00000361776.5 protein_coding 42335059,42311050,42278348,42265115,42227883,42199102,42194890,42191303,42189303,42188737,42181917,42176545 42335215,42311110,42278672,42265189,42227966,42199230,42195064,42191719,42189404,42188928,42182024,42179825 Gene ID= ENSG00000198815.8 TPM= 2.26 Transcript Type= protein_coding chr1 42430329 42456267 42430329 42456267 - ENST00000372565.7@ZMYND12 ENST00000372565.7 protein_coding 42455888,42449918,42448467,42439856,42436421,42435274,42433143,42430329 42456267,42450059,42448638,42440025,42436543,42435385,42433288,42430858 Gene ID= ENSG00000066185.12 TPM= 1.81 Transcript Type= protein_coding chr1 42456524 42460414 42456524 42460414 + transcript3127.chr1.nic@PPCS transcript3127.chr1.nic protein_coding 42456524,42457247,42459603 42457073,42457567,42460414 Gene ID= ENSG00000127125.8 TPM= 4.53 Transcript Type= NA chr1 42456561 42460414 42456561 42460414 + ENST00000372556.3@PPCS ENST00000372556.3 protein_coding 42456561,42457247,42459603 42456628,42457350,42460414 Gene ID= ENSG00000127125.8 TPM= 38.03 Transcript Type= protein_coding chr1 42456559 42460414 42456559 42460414 + ENST00000372561.3@PPCS ENST00000372561.3 protein_coding 42456559,42457247,42459603 42457073,42457350,42460414 Gene ID= ENSG00000127125.8 TPM= 85.12 Transcript Type= protein_coding chr1 42658425 42676758 42658425 42676758 + ENST00000304979.7@PPIH ENST00000304979.7 protein_coding 42658425,42658844,42659228,42659522,42660862,42664863,42665980,42666547,42667351,42676584 42658512,42658908,42659251,42659566,42660904,42664955,42666067,42666587,42667440,42676758 Gene ID= ENSG00000171960.10 TPM= 5.43 Transcript Type= protein_coding chr1 42682864 42702361 42682864 42702361 + transcript3137.chr1.nic@YBX1 transcript3137.chr1.nic protein_coding 42682864,42693490,42696199,42696642,42697180,42700781,42701981 42683466,42693523,42696288,42696944,42697262,42701046,42702361 Gene ID= ENSG00000065978.18 TPM= 8.15 Transcript Type= NA chr1 42682427 42702349 42682427 42702349 + ENST00000321358.11@YBX1 ENST00000321358.11 protein_coding 42682427,42683403,42693490,42696199,42696642,42697180,42700781,42701981 42682731,42683466,42693523,42696288,42696944,42697262,42701046,42702349 Gene ID= ENSG00000065978.18 TPM= 76.07 Transcript Type= protein_coding chr1 42746335 42767084 42746335 42767084 - ENST00000397054.7@P3H1 ENST00000397054.7 protein_coding 42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42747253,42746335 42767084,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412,42746852 Gene ID= ENSG00000117385.15 TPM= 73.48 Transcript Type= protein_coding chr1 42746360 42767074 42746360 42767074 - transcript3154.chr1.nic@P3H1 transcript3154.chr1.nic protein_coding 42766507,42762323,42759201,42758852,42757783,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747253,42746360 42767074,42762475,42759390,42758983,42757922,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852 Gene ID= ENSG00000117385.15 TPM= 3.75 Transcript Type= NA chr1 42746374 42766989 42746374 42766989 - ENST00000460031.5@P3H1 ENST00000460031.5 protein_coding 42766507,42762323,42759201,42758852,42757783,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746374 42766989,42762475,42759390,42758983,42757922,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852 Gene ID= ENSG00000117385.15 TPM= 18.87 Transcript Type= retained_intron chr1 42746375 42767022 42746375 42767022 - ENST00000495874.5@P3H1 ENST00000495874.5 protein_coding 42766507,42762323,42759201,42758852,42757783,42756401,42755548,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375 42767022,42762475,42759390,42758983,42757922,42756455,42755637,42755217,42752664,42752369,42750336,42748317,42747798,42747412,42746852 Gene ID= ENSG00000117385.15 TPM= 3.48 Transcript Type= retained_intron chr1 42746375 42767023 42746375 42767023 - ENST00000296388.9@P3H1 ENST00000296388.9 protein_coding 42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42747272,42746375 42767023,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412,42746852 Gene ID= ENSG00000117385.15 TPM= 52.83 Transcript Type= protein_coding chr1 42746375 42767012 42746375 42767012 - ENST00000236040.8@P3H1 ENST00000236040.8 protein_coding 42766507,42762323,42759201,42758852,42757783,42755548,42755165,42754869,42752537,42752274,42750186,42748200,42747723,42746375 42767012,42762475,42759390,42758983,42757922,42755637,42755217,42754990,42752664,42752369,42750336,42748317,42747798,42747412 Gene ID= ENSG00000117385.15 TPM= 1.94 Transcript Type= protein_coding chr1 42767269 42775747 42767269 42775747 + ENST00000372525.5@C1orf50 ENST00000372525.5 protein_coding 42767269,42767509,42773563,42774737,42775209 42767390,42767624,42773649,42774868,42775747 Gene ID= ENSG00000164008.14 TPM= 12.68 Transcript Type= protein_coding chr1 42767284 42779492 42767284 42779492 + transcript3162.chr1.nnic@AC098484.3 transcript3162.chr1.nnic protein_coding 42767284,42773563,42774737,42775209 42767390,42773649,42774868,42779492 Gene ID= ENSG00000283580.1 TPM= 1.81 Transcript Type= NA chr1 42807052 42817380 42807052 42817380 - transcript3171.chr1.nnic@SVBP transcript3171.chr1.nnic protein_coding 42817190,42816431,42807052 42817380,42816605,42807500 Gene ID= ENSG00000177868.11 TPM= 2.72 Transcript Type= NA chr1 42807056 42817252 42807056 42817252 - ENST00000372521.8@SVBP ENST00000372521.8 protein_coding 42817190,42816431,42807056 42817252,42816580,42807500 Gene ID= ENSG00000177868.11 TPM= 3.62 Transcript Type= protein_coding chr1 42817108 42845943 42817108 42845943 + transcript3167.chr1.nnic@ERMAP transcript3167.chr1.nnic protein_coding 42817108,42817534,42825623,42830444,42830768,42835038,42835732,42837158,42838901,42840033,42840152,42840270,42842517 42817253,42817815,42825738,42830533,42831115,42835154,42835764,42837190,42838921,42840053,42840178,42840296,42845943 Gene ID= ENSG00000164010.13 TPM= 4.53 Transcript Type= NA chr1 42817131 42844983 42817131 42844983 + ENST00000372517.6@ERMAP ENST00000372517.6 protein_coding 42817131,42825623,42830444,42830768,42835038,42835732,42837158,42838901,42840033,42840152,42840270,42842517 42817253,42825738,42830533,42831115,42835154,42835764,42837190,42838921,42840053,42840178,42840296,42844983 Gene ID= ENSG00000164010.13 TPM= 16.3 Transcript Type= protein_coding chr1 42846573 42852473 42846573 42852473 + ENST00000372502.5@ZNF691 ENST00000372502.5 protein_coding 42846573,42849291,42849565,42850950 42846657,42849413,42849742,42852473 Gene ID= ENSG00000164011.17 TPM= 13.58 Transcript Type= protein_coding chr1 42846614 42852474 42846614 42852474 + transcript3176.chr1.nnic@ZNF691 transcript3176.chr1.nnic protein_coding 42846614,42849565,42850950 42846657,42849742,42852474 Gene ID= ENSG00000164011.17 TPM= 2.72 Transcript Type= NA chr1 42846609 42852477 42846609 42852477 + ENST00000372508.7@ZNF691 ENST00000372508.7 protein_coding 42846609,42850950 42846657,42852477 Gene ID= ENSG00000164011.17 TPM= 4.53 Transcript Type= protein_coding chr1 42846626 42852477 42846626 42852477 + ENST00000372507.5@ZNF691 ENST00000372507.5 protein_coding 42846626,42849291,42850950 42846657,42849413,42852477 Gene ID= ENSG00000164011.17 TPM= 2.72 Transcript Type= protein_coding chr1 42925375 42959173 42925375 42959173 - ENST00000426263.7@SLC2A1 ENST00000426263.7 protein_coding 42958634,42943226,42931046,42930626,42929873,42929593,42929210,42928932,42927605,42925375 42959173,42943321,42931206,42930866,42930035,42929780,42929314,42929033,42927808,42927241 Gene ID= ENSG00000117394.20 TPM= 56.14 Transcript Type= protein_coding chr1 43164175 43172321 43164175 43172321 - transcript3185.chr1.nic@EBNA1BP2 transcript3185.chr1.nic protein_coding 43172053,43170756,43168939,43167160,43166826,43164643,43164175 43172321,43171969,43169028,43167235,43166919,43164805,43164493 Gene ID= ENSG00000117395.12 TPM= 1.81 Transcript Type= NA chr1 43164184 43172260 43164184 43172260 - ENST00000236051.2@EBNA1BP2 ENST00000236051.2 protein_coding 43172053,43171886,43171479,43170756,43168939,43167160,43166826,43164643,43164184 43172260,43171969,43171651,43170879,43169028,43167235,43166919,43164805,43164493 Gene ID= ENSG00000117395.12 TPM= 44.37 Transcript Type= protein_coding chr1 43270025 43274002 43270025 43274002 + ENST00000432792.6@TMEM125 ENST00000432792.6 protein_coding 43270025,43270586,43272184,43272578 43270085,43270793,43272339,43274002 Gene ID= ENSG00000179178.10 TPM= 4.53 Transcript Type= protein_coding chr1 43300955 43323108 43300955 43323108 + transcript3192.chr1.nic@TIE1 transcript3192.chr1.nic protein_coding 43300955,43304851,43305233,43306840,43307142,43307432,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43317199,43317564,43317882,43319235,43319459,43321269,43321396,43321616,43322651 43301129,43305165,43305343,43306995,43307273,43307572,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43317409,43317674,43318072,43319348,43319529,43321309,43321492,43321715,43323108 Gene ID= ENSG00000066056.13 TPM= 28.98 Transcript Type= NA chr1 43300955 43315269 43300955 43315269 + transcript3198.chr1.nic@TIE1 transcript3198.chr1.nic protein_coding 43300955,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43314383 43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43315269 Gene ID= ENSG00000066056.13 TPM= 6.34 Transcript Type= NA chr1 43300993 43323108 43300993 43323108 + ENST00000372476.7@TIE1 ENST00000372476.7 protein_coding 43300993,43304851,43305233,43306840,43307142,43307432,43307796,43308986,43309388,43311671,43311994,43312305,43313135,43313778,43317199,43317564,43317882,43319235,43319459,43321269,43321396,43321616,43322651 43301129,43305165,43305343,43306995,43307273,43307572,43307924,43309131,43309532,43311829,43312131,43312601,43313425,43313968,43317409,43317674,43318072,43319348,43319529,43321309,43321492,43321715,43323108 Gene ID= ENSG00000066056.13 TPM= 79.69 Transcript Type= protein_coding chr1 43358955 43363203 43358955 43363203 + ENST00000310955.10@CDC20 ENST00000310955.10 protein_coding 43358955,43359167,43359490,43359725,43359969,43360193,43360499,43360733,43361120,43362195,43362951 43359006,43359396,43359638,43359821,43360097,43360389,43360593,43360961,43361245,43362312,43363203 Gene ID= ENSG00000117399.13 TPM= 5.43 Transcript Type= protein_coding chr1 43363398 43367738 43363398 43367738 - ENST00000621943.4@ELOVL1 ENST00000621943.4 protein_coding 43367486,43365564,43365186,43364928,43364738,43364542,43364324,43363398 43367738,43365623,43365376,43365008,43364794,43364647,43364460,43364137 Gene ID= ENSG00000066322.14 TPM= 4.07 Transcript Type= protein_coding chr1 43363397 43368018 43363397 43368018 - ENST00000372458.7@ELOVL1 ENST00000372458.7 protein_coding 43367915,43365564,43365186,43364928,43364738,43364542,43364324,43363397 43368018,43365623,43365376,43365008,43364794,43364647,43364460,43364137 Gene ID= ENSG00000066322.14 TPM= 80.14 Transcript Type= protein_coding chr1 43383917 43389808 43383917 43389808 - ENST00000290663.10@MED8 ENST00000290663.10 protein_coding 43389759,43388310,43387503,43386858,43386589,43385978,43385046,43383917 43389808,43388428,43387647,43386998,43386670,43386226,43385106,43384552 Gene ID= ENSG00000159479.16 TPM= 10.87 Transcript Type= protein_coding chr1 43383969 43389808 43383969 43389808 - ENST00000372457.8@MED8 ENST00000372457.8 protein_coding 43389759,43388310,43387503,43386858,43386589,43385978,43383969 43389808,43388428,43387647,43386998,43386670,43386226,43385106 Gene ID= ENSG00000159479.16 TPM= 30.79 Transcript Type= protein_coding chr1 43389896 43454247 43389896 43454247 + ENST00000562955.2@SZT2 ENST00000562955.2 protein_coding 43389896,43403177,43403601,43404380,43415082,43415960,43416535,43419734,43420153,43420749,43421174,43422083,43422480,43422769,43423099,43424217,43424784,43425113,43425474,43425835,43426038,43426715,43427056,43427281,43427530,43428003,43428240,43429703,43430011,43430311,43430496,43430949,43431265,43431460,43431716,43432272,43432517,43432728,43432989,43434386,43435200,43437171,43437406,43437595,43437791,43438699,43438929,43439358,43439605,43439881,43440453,43441214,43441504,43441686,43442000,43442268,43442442,43442819,43443188,43443352,43443597,43445894,43446179,43446342,43446955,43447545,43447849,43448079,43448612,43450103,43450337 43389995,43403302,43403774,43404550,43415213,43416101,43416641,43419944,43420323,43420983,43421303,43422225,43422632,43422883,43423316,43424432,43424862,43425207,43425642,43425949,43426151,43426809,43427179,43427445,43427734,43428118,43428486,43429844,43430103,43430389,43430789,43431090,43431372,43431523,43431901,43432439,43432604,43432799,43433190,43434485,43435329,43437323,43437508,43437700,43437902,43438817,43439093,43439442,43439769,43440048,43440586,43441380,43441601,43441818,43442130,43442368,43442618,43443086,43443267,43443477,43443796,43445984,43446259,43446416,43447168,43447698,43447971,43448484,43448728,43450171,43454247 Gene ID= ENSG00000198198.15 TPM= 5.43 Transcript Type= protein_coding chr1 43451151 43453820 43451151 43453820 - transcript3224.chr1.nic@HYI transcript3224.chr1.nic protein_coding 43453595,43452205,43451935,43451798,43451648,43451428,43451151 43453820,43453497,43452013,43451847,43451717,43451544,43451311 Gene ID= ENSG00000178922.16 TPM= 3.02 Transcript Type= NA chr1 43451151 43453999 43451151 43453999 - transcript3227.chr1.nic@HYI transcript3227.chr1.nic protein_coding 43453595,43451935,43451798,43451648,43451428,43451151 43453999,43453497,43451847,43451717,43451544,43451311 Gene ID= ENSG00000178922.16 TPM= 2.11 Transcript Type= NA chr1 43451160 43453801 43451160 43453801 - transcript3229.chr1.nic@HYI transcript3229.chr1.nic protein_coding 43452205,43451935,43451798,43451648,43451160 43453801,43452013,43451847,43451717,43451544 Gene ID= ENSG00000178922.16 TPM= 1.81 Transcript Type= NA chr1 43451158 43453963 43451158 43453963 - ENST00000372432.5@HYI ENST00000372432.5 protein_coding 43453595,43453386,43452205,43451935,43451798,43451648,43451428,43451158 43453963,43453497,43452319,43452013,43451847,43451717,43451544,43451311 Gene ID= ENSG00000178922.16 TPM= 14.79 Transcript Type= protein_coding chr1 43530841 43623663 43530841 43623663 + transcript3233.chr1.nic@PTPRF transcript3233.chr1.nic protein_coding 43530841,43538198,43545031,43553492,43553800,43569590,43578810,43588731,43590972,43591812,43592457,43597748,43598720,43602071,43603416,43604903,43605190,43605529,43606240,43606814,43609383,43613618,43617445,43617736,43618630,43619048,43619288,43619680,43620095,43620454,43620838,43621097,43621935 43531090,43538277,43545166,43553637,43553941,43569778,43578920,43589000,43591553,43591948,43592601,43598053,43598913,43602097,43603533,43605000,43605443,43605622,43606458,43606968,43609498,43613715,43617568,43617911,43618749,43619202,43619573,43619858,43620221,43620579,43620992,43621232,43623663 Gene ID= ENSG00000142949.16 TPM= 7.85 Transcript Type= NA chr1 43598074 43623666 43598074 43623666 + ENST00000496447.5@PTPRF ENST00000496447.5 protein_coding 43598074,43603416,43603611,43604903,43605190,43605529,43606240,43606814,43609383,43613618,43617445,43617736,43618630,43619048,43619288,43619680,43620095,43620454,43620838,43621097,43621935 43598913,43603533,43604189,43605000,43605443,43605622,43606458,43606968,43609498,43613715,43617568,43617911,43618749,43619202,43619573,43619858,43620221,43620579,43620992,43621232,43623666 Gene ID= ENSG00000142949.16 TPM= 7.4 Transcript Type= processed_transcript chr1 43530876 43623666 43530876 43623666 + ENST00000359947.8@PTPRF ENST00000359947.8 protein_coding 43530876,43538198,43545031,43553492,43553800,43569590,43578810,43588731,43590972,43591812,43592457,43597748,43598720,43602071,43603416,43603611,43604903,43605190,43605529,43606240,43606814,43609383,43613618,43617445,43617736,43618630,43619048,43619288,43619680,43620095,43620454,43620838,43621097,43621935 43531090,43538277,43545166,43553637,43553941,43569778,43578920,43589000,43591553,43591948,43592601,43598053,43598913,43602097,43603533,43604189,43605000,43605443,43605622,43606458,43606968,43609498,43613715,43617568,43617911,43618749,43619202,43619573,43619858,43620221,43620579,43620992,43621232,43623666 Gene ID= ENSG00000142949.16 TPM= 21.89 Transcript Type= protein_coding chr1 43649256 43705517 43649256 43705517 + transcript3237.chr1.nnic@KDM4A transcript3237.chr1.nnic protein_coding 43649256,43653137,43655591,43660298,43662894,43665696,43666452,43666954,43667772,43669100,43671505,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230 43649879,43653313,43655766,43660412,43663087,43665745,43666555,43667091,43668019,43669299,43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705517 Gene ID= ENSG00000066135.12 TPM= 1.81 Transcript Type= NA chr1 43650507 43705517 43650507 43705517 + transcript3240.chr1.nic@KDM4A transcript3240.chr1.nic protein_coding 43650507,43653137,43655591,43660298,43662894,43665696,43666452,43666954,43667772,43669100,43671505,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230 43650674,43653313,43655766,43660412,43663087,43665745,43666555,43667091,43668019,43669299,43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705517 Gene ID= ENSG00000066135.12 TPM= 1.81 Transcript Type= NA chr1 43670582 43705517 43670582 43705517 + transcript3247.chr1.nic@KDM4A transcript3247.chr1.nic protein_coding 43670582,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230 43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705517 Gene ID= ENSG00000066135.12 TPM= 5.43 Transcript Type= NA chr1 43650158 43705515 43650158 43705515 + ENST00000372396.3@KDM4A ENST00000372396.3 protein_coding 43650158,43653137,43655591,43660298,43662894,43665696,43666452,43666954,43667772,43669100,43671505,43683684,43688914,43690845,43691496,43692256,43693994,43694709,43697843,43703617,43704020,43704230 43650252,43653313,43655766,43660412,43663087,43665745,43666555,43667091,43668019,43669299,43671875,43683804,43689095,43691049,43691572,43692311,43694102,43694894,43698013,43703736,43704112,43705515 Gene ID= ENSG00000066135.12 TPM= 30.79 Transcript Type= protein_coding chr1 43707516 43931166 43707516 43931166 + transcript3244.chr1.nic@ST3GAL3 transcript3244.chr1.nic protein_coding 43707516,43736233,43792102,43814891,43824731,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132 43707693,43736380,43792149,43814933,43824892,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931166 Gene ID= ENSG00000126091.19 TPM= 2.9 Transcript Type= NA chr1 43707516 43931166 43707516 43931166 + transcript3248.chr1.nic@ST3GAL3 transcript3248.chr1.nic protein_coding 43707516,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899509,43920404,43920782,43930132 43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931166 Gene ID= ENSG00000126091.19 TPM= 3.8 Transcript Type= NA chr1 43707547 43931159 43707547 43931159 + ENST00000361392.8@ST3GAL3 ENST00000361392.8 protein_coding 43707547,43736233,43792102,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132 43707693,43736380,43792149,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159 Gene ID= ENSG00000126091.19 TPM= 25.54 Transcript Type= protein_coding chr1 43707547 43931159 43707547 43931159 + ENST00000361400.8@ST3GAL3 ENST00000361400.8 protein_coding 43707547,43736233,43814891,43838219,43894383,43898235,43899168,43899541,43920404,43920782,43930132 43707693,43736380,43814933,43838311,43894477,43898298,43899263,43899727,43920550,43920928,43931159 Gene ID= ENSG00000126091.19 TPM= 2.9 Transcript Type= protein_coding chr1 43707533 43931165 43707533 43931165 + ENST00000372374.6@ST3GAL3 ENST00000372374.6 protein_coding 43707533,43736233,43792102,43814891,43894383,43898235,43899168,43899541,43920404,43920782,43930132 43707693,43736380,43792149,43814933,43894477,43898298,43899263,43899727,43920550,43920928,43931165 Gene ID= ENSG00000126091.19 TPM= 1.09 Transcript Type= protein_coding chr1 43946954 43968022 43946954 43968022 + transcript3259.chr1.nnic@IPO13 transcript3259.chr1.nnic protein_coding 43946954,43949417,43956320,43956631,43956810,43957195,43957402,43957977,43958242,43958461,43958746,43960249,43960876,43961166,43964269,43966575,43966724,43966930,43967315,43967586 43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43958889,43960329,43961013,43961262,43964321,43966641,43966782,43967019,43967496,43968022 Gene ID= ENSG00000117408.10 TPM= 1.81 Transcript Type= NA chr1 43946806 43968022 43946806 43968022 + transcript3260.chr1.nnic@IPO13 transcript3260.chr1.nnic protein_coding 43946806,43949504,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746,43960249,43960876,43961166,43964269,43966575,43966724,43966930,43967315,43967586 43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43958889,43960329,43961013,43961262,43964321,43966641,43966782,43967019,43967496,43968022 Gene ID= ENSG00000117408.10 TPM= 3.62 Transcript Type= NA chr1 43946939 43968022 43946939 43968022 + ENST00000372343.7@IPO13 ENST00000372343.7 protein_coding 43946939,43949417,43956320,43956560,43956810,43957195,43957402,43957977,43958242,43958461,43958746,43960249,43960876,43961166,43964269,43966575,43966724,43966930,43967315,43967586 43947684,43950153,43956460,43956701,43956976,43957315,43957549,43958158,43958268,43958595,43958889,43960329,43961013,43961262,43964321,43966641,43966782,43967019,43967496,43968022 Gene ID= ENSG00000117408.10 TPM= 67.01 Transcript Type= protein_coding chr1 43970004 43973369 43970004 43973369 + ENST00000255108.7@DPH2 ENST00000255108.7 protein_coding 43970004,43970596,43970966,43971387,43972158,43972415 43970322,43970708,43971189,43972070,43972334,43973369 Gene ID= ENSG00000132768.13 TPM= 14.04 Transcript Type= protein_coding chr1 43970010 43973369 43970010 43973369 + ENST00000495421.1@DPH2 ENST00000495421.1 protein_coding 43970010,43970596,43970966,43971387,43972158,43972415 43970270,43970708,43971189,43972070,43972334,43973369 Gene ID= ENSG00000132768.13 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr1 43974648 43978294 43974648 43978294 + ENST00000472174.6@ATP6V0B ENST00000472174.6 protein_coding 43974648,43975800,43976090,43976302,43976590,43976773,43977026,43977981 43975107,43975848,43976173,43976379,43976659,43976824,43977216,43978294 Gene ID= ENSG00000117410.13 TPM= 268.65 Transcript Type= protein_coding chr1 43974948 43978289 43974948 43978289 + ENST00000236067.8@ATP6V0B ENST00000236067.8 protein_coding 43974948,43976090,43976302,43976590,43976773,43977026,43977981 43975107,43976173,43976379,43976659,43976824,43977216,43978289 Gene ID= ENSG00000117410.13 TPM= 2.72 Transcript Type= protein_coding chr1 43979178 43991170 43979178 43991170 + transcript3292.chr1.nic@B4GALT2 transcript3292.chr1.nic protein_coding 43979178,43981109,43981689,43984865,43985278,43985517,43990298 43979616,43981473,43981924,43985055,43985400,43985621,43991170 Gene ID= ENSG00000117411.16 TPM= 7.24 Transcript Type= NA chr1 43979202 43991170 43979202 43991170 + ENST00000372324.5@B4GALT2 ENST00000372324.5 protein_coding 43979202,43981109,43981689,43984865,43985278,43985517,43990298 43979511,43981473,43981924,43985055,43985400,43985621,43991170 Gene ID= ENSG00000117411.16 TPM= 59.77 Transcript Type= protein_coding chr1 43991789 43996524 43991789 43996524 + transcript3284.chr1.nic@CCDC24 transcript3284.chr1.nic protein_coding 43991789,43992212,43992523,43993890,43995108,43995601,43995778,43995938 43992004,43992387,43992639,43993964,43995162,43995670,43995856,43996524 Gene ID= ENSG00000159214.12 TPM= 3.32 Transcript Type= NA chr1 43991613 43996524 43991613 43996524 + transcript3293.chr1.nnic@CCDC24 transcript3293.chr1.nnic protein_coding 43991613,43992523,43993890,43995108,43995601,43995778,43995938 43992377,43992639,43993964,43995162,43995670,43995856,43996524 Gene ID= ENSG00000159214.12 TPM= 2.42 Transcript Type= NA chr1 43991608 43996528 43991608 43996528 + ENST00000372318.7@CCDC24 ENST00000372318.7 protein_coding 43991608,43991847,43992212,43992523,43993887,43995108,43995601,43995778,43995938 43991746,43992004,43992387,43992639,43993964,43995162,43995670,43995856,43996528 Gene ID= ENSG00000159214.12 TPM= 7.85 Transcript Type= protein_coding chr1 43996483 44031386 43996483 44031386 - ENST00000372310.7@SLC6A9 ENST00000372310.7 protein_coding 44031306,44024248,44010726,44009965,44008353,44002853,44002512,44002313,44001390,44001164,44000956,44000767,43997855,43996483 44031386,44024362,44010882,44010096,44008623,44002985,44002646,44002416,44001627,44001298,44001055,44000867,43998025,43997739 Gene ID= ENSG00000196517.11 TPM= 10.87 Transcript Type= protein_coding chr1 44213427 44220679 44213427 44220679 + transcript3300.chr1.nic@DMAP1 transcript3300.chr1.nic protein_coding 44213427,44213663,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559 44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220679 Gene ID= ENSG00000178028.13 TPM= 8.67 Transcript Type= NA chr1 44213427 44220679 44213427 44220679 + transcript3302.chr1.nic@DMAP1 transcript3302.chr1.nic protein_coding 44213427,44213709,44214350,44214703,44218341,44218588,44219056,44219406,44219806,44220017,44220559 44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220679 Gene ID= ENSG00000178028.13 TPM= 2.72 Transcript Type= NA chr1 44213455 44220681 44213455 44220681 + ENST00000361745.10@DMAP1 ENST00000361745.10 protein_coding 44213455,44213749,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559 44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681 Gene ID= ENSG00000178028.13 TPM= 15 Transcript Type= protein_coding chr1 44213427 44220679 44213427 44220679 + transcript3307.chr1.nic@DMAP1 transcript3307.chr1.nic protein_coding 44213427,44213709,44214350,44214703,44218588,44219056,44219406,44219806,44220017,44220559 44213527,44213858,44214441,44218469,44218755,44219241,44219477,44219878,44220309,44220679 Gene ID= ENSG00000178028.13 TPM= 3.62 Transcript Type= NA chr1 44213488 44220681 44213488 44220681 + ENST00000315913.9@DMAP1 ENST00000315913.9 protein_coding 44213488,44213709,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559 44213527,44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681 Gene ID= ENSG00000178028.13 TPM= 54.85 Transcript Type= protein_coding chr1 44213491 44220681 44213491 44220681 + ENST00000372289.6@DMAP1 ENST00000372289.6 protein_coding 44213491,44214350,44214703,44218311,44218588,44219056,44219406,44219806,44220017,44220559 44213858,44214441,44214898,44218469,44218755,44219241,44219477,44219878,44220309,44220681 Gene ID= ENSG00000178028.13 TPM= 19.53 Transcript Type= protein_coding chr1 44221071 44355291 44221071 44355291 - transcript3314.chr1.nnic@ERI3 transcript3314.chr1.nnic protein_coding 44355260,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221071 44355291,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 2.07 Transcript Type= NA chr1 44221071 44355267 44221071 44355267 - transcript3316.chr1.nic@ERI3 transcript3316.chr1.nic protein_coding 44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221071 44355267,44339322,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 2.07 Transcript Type= NA chr1 44221071 44355257 44221071 44355257 - transcript3317.chr1.nic@ERI3 transcript3317.chr1.nic protein_coding 44354892,44339045,44319628,44313169,44308310,44284835,44247939,44221071 44355257,44339322,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 2.07 Transcript Type= NA chr1 44221071 44355392 44221071 44355392 - transcript3318.chr1.nnic@ERI3 transcript3318.chr1.nnic protein_coding 44355260,44339045,44319628,44313169,44308310,44284835,44247939,44221071 44355392,44339322,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 7.51 Transcript Type= NA chr1 44221071 44355291 44221071 44355291 - transcript3319.chr1.nnic@ERI3 transcript3319.chr1.nnic protein_coding 44355260,44352850,44319628,44313169,44308310,44284835,44247939,44221071 44355291,44352925,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 3.88 Transcript Type= NA chr1 44221071 44355281 44221071 44355281 - transcript3322.chr1.nnic@ERI3 transcript3322.chr1.nnic protein_coding 44355260,44319628,44313169,44308310,44284835,44247939,44221071 44355281,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 7.51 Transcript Type= NA chr1 44221070 44355208 44221070 44355208 - ENST00000372257.6@ERI3 ENST00000372257.6 protein_coding 44354892,44352850,44339045,44319628,44313169,44308310,44284835,44247939,44221070 44355208,44352925,44339322,44319744,44313228,44308401,44284907,44248038,44221640 Gene ID= ENSG00000117419.14 TPM= 51.88 Transcript Type= protein_coding chr1 44631952 44651724 44631952 44651724 + transcript3324.chr1.nic@RNF220 transcript3324.chr1.nic protein_coding 44631952,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704 44632212,44632385,44635588,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651724 Gene ID= ENSG00000187147.17 TPM= 16.15 Transcript Type= NA chr1 44631953 44651724 44631953 44651724 + transcript3327.chr1.nic@RNF220 transcript3327.chr1.nic protein_coding 44631953,44632343,44635545,44636030,44644698,44644995,44645221,44645410,44649661,44649883,44650704 44632208,44632385,44635666,44636162,44644794,44645081,44645276,44645488,44649769,44649957,44651724 Gene ID= ENSG00000187147.17 TPM= 6.64 Transcript Type= NA chr1 44635238 44674477 44635238 44674477 - ENST00000372244.3@TMEM53 ENST00000372244.3 protein_coding 44674331,44645360,44635238 44674477,44645464,44636457 Gene ID= ENSG00000126106.13 TPM= 1.36 Transcript Type= protein_coding chr1 44635238 44674462 44635238 44674462 - ENST00000372243.7@TMEM53 ENST00000372243.7 protein_coding 44674331,44660174,44645360,44635238 44674462,44660295,44645464,44636457 Gene ID= ENSG00000126106.13 TPM= 2.26 Transcript Type= protein_coding chr1 44653247 44674442 44653247 44674442 - ENST00000476724.1@TMEM53 ENST00000476724.1 protein_coding 44674331,44653247 44674442,44655209 Gene ID= ENSG00000126106.13 TPM= 9.06 Transcript Type= processed_transcript chr1 44653247 44674555 44653247 44674555 - ENST00000372237.7@TMEM53 ENST00000372237.7 protein_coding 44674331,44660174,44653247 44674555,44660295,44655209 Gene ID= ENSG00000126106.13 TPM= 28.07 Transcript Type= protein_coding chr1 44739820 44767767 44739820 44767767 + ENST00000372224.8@KIF2C ENST00000372224.8 protein_coding 44739820,44740913,44747384,44747652,44750442,44753132,44753733,44754750,44755929,44756075,44757556,44757908,44758049,44759206,44760280,44760592,44761916,44762346,44762545,44766826,44767097 44740002,44741007,44747485,44747700,44750564,44753254,44753833,44754845,44755983,44756237,44757646,44757971,44758140,44759348,44760484,44760702,44761983,44762451,44762658,44766949,44767767 Gene ID= ENSG00000142945.12 TPM= 1.81 Transcript Type= protein_coding chr1 44775573 44778779 44775573 44778779 + ENST00000372209.3@RPS8 ENST00000372209.3 protein_coding 44775573,44776034,44776675,44777614,44778000,44778576 44775600,44776140,44776714,44777789,44778129,44778779 Gene ID= ENSG00000142937.11 TPM= 13.74 Transcript Type= protein_coding chr1 44775636 44778779 44775636 44778779 + ENST00000485390.5@RPS8 ENST00000485390.5 protein_coding 44775636,44776675,44777614,44778000,44778576 44776140,44776774,44777789,44778129,44778779 Gene ID= ENSG00000142937.11 TPM= 43.17 Transcript Type= processed_transcript chr1 44799915 44805994 44799915 44805994 + transcript3352.chr1.nnic@PLK3 transcript3352.chr1.nnic protein_coding 44799915,44800376,44800840,44801036,44801622,44801845,44802760,44802955,44803268,44803600,44803931,44804163,44804339,44804650,44805266,44805487 44800107,44800673,44800947,44801152,44801751,44801932,44802855,44803153,44803391,44803691,44804024,44804246,44804501,44804779,44805379,44805994 Gene ID= ENSG00000173846.12 TPM= 28.52 Transcript Type= NA chr1 44799937 44805994 44799937 44805994 + transcript3354.chr1.nic@PLK3 transcript3354.chr1.nic protein_coding 44799937,44800840,44801036,44801622,44801845,44802760,44802955,44803268,44803600,44803931,44804163,44804339,44805266,44805487 44800673,44800947,44801152,44801751,44801932,44802855,44803153,44803391,44803691,44804024,44804246,44804501,44805379,44805994 Gene ID= ENSG00000173846.12 TPM= 5.89 Transcript Type= NA chr1 44850778 44986610 44850778 44986610 - ENST00000360403.6@EIF2B3 ENST00000360403.6 protein_coding 44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874678,44857704,44850778 44986610,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826,44857807,44851003 Gene ID= ENSG00000070785.16 TPM= 33.51 Transcript Type= protein_coding chr1 44874527 44986587 44874527 44986587 - ENST00000372183.7@EIF2B3 ENST00000372183.7 protein_coding 44986493,44981021,44978315,44941506,44926628,44897355,44881612,44879818,44875618,44874527 44986587,44981177,44978460,44941665,44926739,44897444,44881739,44880008,44875695,44874826 Gene ID= ENSG00000070785.16 TPM= 1.81 Transcript Type= protein_coding chr1 45002540 45011329 45002540 45011329 - ENST00000372172.4@HECTD3 ENST00000372172.4 protein_coding 45010889,45010546,45010201,45009986,45009568,45009369,45009144,45008536,45008240,45007413,45007219,45006951,45006692,45005997,45005794,45004600,45004248,45004060,45003855,45003669,45002540 45011329,45010706,45010293,45010121,45009683,45009482,45009226,45008701,45008321,45007595,45007271,45007015,45006795,45006116,45005883,45004806,45004377,45004134,45003936,45003740,45003576 Gene ID= ENSG00000126107.14 TPM= 140.81 Transcript Type= protein_coding chr1 45012147 45015575 45012147 45015575 + ENST00000246337.8@UROD ENST00000246337.8 protein_coding 45012147,45012907,45013136,45013292,45013594,45013909,45014439,45014736,45014940,45015337 45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015006,45015575 Gene ID= ENSG00000126088.13 TPM= 269.82 Transcript Type= protein_coding chr1 45012207 45015575 45012207 45015575 + ENST00000636836.1@UROD ENST00000636836.1 protein_coding 45012207,45012907,45013136,45013292,45013594,45013909,45014439,45014736,45015337 45012285,45013019,45013215,45013354,45013791,45014070,45014576,45014836,45015575 Gene ID= ENSG00000126088.13 TPM= 2.42 Transcript Type= protein_coding chr1 45016400 45206577 45016400 45206577 - transcript3394.chr1.nnic@ZSWIM5 transcript3394.chr1.nnic protein_coding 45205756,45060099,45058609,45051074,45043219,45040392,45038936,45036039,45035688,45034312,45020625,45020066,45016400 45206577,45060247,45058759,45051253,45043395,45040538,45039073,45036299,45035823,45034469,45020788,45020147,45019316 Gene ID= ENSG00000162415.6 TPM= 3.62 Transcript Type= NA chr1 45016399 45206556 45016399 45206556 - ENST00000359600.5@ZSWIM5 ENST00000359600.5 protein_coding 45205756,45087881,45060099,45058609,45051074,45043219,45040392,45038936,45036039,45035688,45034312,45020625,45020066,45016399 45206556,45088237,45060247,45058759,45051253,45043395,45040538,45039073,45036299,45035823,45034469,45020788,45020147,45019316 Gene ID= ENSG00000162415.6 TPM= 13.58 Transcript Type= protein_coding chr1 45329242 45340115 45329242 45340115 - ENST00000355498.6@MUTYH ENST00000355498.6 protein_coding 45339976,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242 45340115,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437 Gene ID= ENSG00000132781.17 TPM= 2.11 Transcript Type= protein_coding chr1 45329242 45340470 45329242 45340470 - ENST00000372115.7@MUTYH ENST00000372115.7 protein_coding 45340219,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242 45340470,45334511,45333561,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437 Gene ID= ENSG00000132781.17 TPM= 7.54 Transcript Type= protein_coding chr1 45329242 45340080 45329242 45340080 - ENST00000475516.5@MUTYH ENST00000475516.5 protein_coding 45339976,45334391,45333413,45333285,45333097,45332918,45332763,45332574,45332391,45332166,45332023,45331661,45331420,45331182,45330516,45329242 45340080,45334511,45333497,45333324,45333170,45332959,45332834,45332687,45332488,45332310,45332086,45331849,45331556,45331334,45330557,45329437 Gene ID= ENSG00000132781.17 TPM= 1.2 Transcript Type= nonsense_mediated_decay chr1 45339713 45343986 45339713 45343986 + transcript3432.chr1.nic@TOE1 transcript3432.chr1.nic protein_coding 45339713,45341073,45341303,45341473,45341949,45342384,45342735,45343082 45340304,45341215,45341343,45341569,45342107,45342643,45343002,45343986 Gene ID= ENSG00000132773.11 TPM= 4.53 Transcript Type= NA chr1 45340163 45343986 45340163 45343986 + transcript3439.chr1.nic@TOE1 transcript3439.chr1.nic protein_coding 45340163,45341303,45341473,45342384,45342735,45343082 45341215,45341343,45342107,45342643,45343002,45343986 Gene ID= ENSG00000132773.11 TPM= 1.81 Transcript Type= NA chr1 45339670 45343975 45339670 45343975 + ENST00000372090.5@TOE1 ENST00000372090.5 protein_coding 45339670,45341073,45341303,45341473,45341949,45342384,45342843,45343082 45340304,45341215,45341343,45341569,45342107,45342643,45343002,45343975 Gene ID= ENSG00000132773.11 TPM= 9.06 Transcript Type= protein_coding chr1 45343880 45491171 45343880 45491171 - transcript3431.chr1.nnic@TESK2 transcript3431.chr1.nnic protein_coding 45490852,45457564,45421725,45385912,45347918,45347609,45346979,45346693,45345877,45343880 45491171,45457871,45421846,45385960,45348000,45347693,45347062,45346779,45345994,45345558 Gene ID= ENSG00000070759.16 TPM= 1.81 Transcript Type= NA chr1 45343883 45491166 45343883 45491166 - ENST00000372086.3@TESK2 ENST00000372086.3 protein_coding 45490852,45457564,45421725,45385912,45355303,45347918,45347609,45346979,45346693,45345877,45343883 45491166,45457871,45421846,45385960,45355449,45348000,45347693,45347062,45346779,45345994,45345558 Gene ID= ENSG00000070759.16 TPM= 9.06 Transcript Type= protein_coding chr1 45500053 45513382 45500053 45513382 + ENST00000401061.8@MMACHC ENST00000401061.8 protein_coding 45500053,45507356,45508212,45508796 45500413,45507550,45508364,45513382 Gene ID= ENSG00000132763.14 TPM= 4.53 Transcript Type= protein_coding chr1 45511047 45521956 45511047 45521956 - ENST00000319248.12@PRDX1 ENST00000319248.12 protein_coding 45521829,45518938,45515654,45514873,45514507,45511047 45521956,45519054,45515807,45514995,45514637,45511414 Gene ID= ENSG00000117450.13 TPM= 275.74 Transcript Type= protein_coding chr1 45550804 45570050 45550804 45570050 + transcript3448.chr1.nic@AKR1A1 transcript3448.chr1.nic protein_coding 45550804,45550966,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891 45550876,45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570050 Gene ID= ENSG00000117448.13 TPM= 11.77 Transcript Type= NA chr1 45550783 45570048 45550783 45570048 + ENST00000621846.4@AKR1A1 ENST00000621846.4 protein_coding 45550783,45550966,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891 45550876,45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570048 Gene ID= ENSG00000117448.13 TPM= 38.03 Transcript Type= protein_coding chr1 45550543 45570049 45550543 45570049 + ENST00000372070.7@AKR1A1 ENST00000372070.7 protein_coding 45550543,45552436,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891 45551155,45552563,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049 Gene ID= ENSG00000117448.13 TPM= 12.68 Transcript Type= protein_coding chr1 45550804 45570050 45550804 45570050 + transcript3452.chr1.nic@AKR1A1 transcript3452.chr1.nic protein_coding 45550804,45550966,45561789,45566569,45566869,45568485,45568927,45569143,45569891 45550876,45551155,45561878,45566688,45568177,45568684,45568999,45569229,45570050 Gene ID= ENSG00000117448.13 TPM= 4.07 Transcript Type= NA chr1 45550797 45570050 45550797 45570050 + transcript3455.chr1.nic@AKR1A1 transcript3455.chr1.nic protein_coding 45550797,45561789,45566569,45566869,45568485,45568927,45569143,45569891 45551155,45561878,45566688,45568177,45568684,45568999,45569229,45570050 Gene ID= ENSG00000117448.13 TPM= 4.07 Transcript Type= NA chr1 45551067 45570049 45551067 45570049 + ENST00000351829.8@AKR1A1 ENST00000351829.8 protein_coding 45551067,45561789,45566569,45566869,45567982,45568485,45568927,45569143,45569891 45551155,45561878,45566688,45567020,45568177,45568684,45568999,45569229,45570049 Gene ID= ENSG00000117448.13 TPM= 13.58 Transcript Type= protein_coding chr1 45584065 45618247 45584065 45618247 + ENST00000351223.7@NASP ENST00000351223.7 protein_coding 45584065,45591223,45602255,45604936,45606482,45613169,45614096,45614293,45615013,45615305,45616337,45616626,45617463,45618061 45584205,45591270,45602365,45605016,45606591,45613248,45614181,45614366,45615201,45615471,45616393,45616703,45617591,45618247 Gene ID= ENSG00000132780.16 TPM= 23.54 Transcript Type= protein_coding chr1 45627291 45687135 45627291 45687135 - transcript3466.chr1.nic@GPBP1L1 transcript3466.chr1.nic protein_coding 45686993,45685576,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627291 45687135,45685620,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408 Gene ID= ENSG00000159592.10 TPM= 7.24 Transcript Type= NA chr1 45627291 45687101 45627291 45687101 - transcript3469.chr1.nic@GPBP1L1 transcript3469.chr1.nic protein_coding 45686993,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627291 45687101,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408 Gene ID= ENSG00000159592.10 TPM= 10.87 Transcript Type= NA chr1 45627291 45688099 45627291 45688099 - transcript3470.chr1.nic@GPBP1L1 transcript3470.chr1.nic protein_coding 45687983,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627291 45688099,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408 Gene ID= ENSG00000159592.10 TPM= 6.34 Transcript Type= NA chr1 45627304 45686536 45627304 45686536 - ENST00000290795.7@GPBP1L1 ENST00000290795.7 protein_coding 45686412,45660184,45659028,45655190,45654543,45642427,45640210,45634096,45633489,45630482,45629576,45627304 45686536,45661225,45659142,45655319,45654829,45642499,45640403,45634236,45633647,45630606,45629678,45628408 Gene ID= ENSG00000159592.10 TPM= 25.36 Transcript Type= protein_coding chr1 45687214 45694443 45687214 45694443 + ENST00000372025.4@TMEM69 ENST00000372025.4 protein_coding 45687214,45690974,45693204 45688275,45691110,45694443 Gene ID= ENSG00000159596.6 TPM= 14.49 Transcript Type= protein_coding chr1 45697057 45750646 45697057 45750646 - transcript3473.chr1.nnic@IPP transcript3473.chr1.nnic protein_coding 45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45700070,45697057 45750646,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45700190,45698264 Gene ID= ENSG00000197429.10 TPM= 3.24 Transcript Type= NA chr1 45698736 45750628 45698736 45750628 - transcript3478.chr1.nnic@IPP transcript3478.chr1.nnic protein_coding 45750597,45746120,45740901,45729614,45727631,45719203,45716895,45698736 45750628,45746461,45741332,45729769,45727798,45719340,45717017,45700190 Gene ID= ENSG00000197429.10 TPM= 2.04 Transcript Type= NA chr1 45694324 45750650 45694324 45750650 - ENST00000359942.8@IPP ENST00000359942.8 protein_coding 45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45700070,45694324 45750650,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45700190,45694515 Gene ID= ENSG00000197429.10 TPM= 1.43 Transcript Type= protein_coding chr1 45698711 45750649 45698711 45750649 - ENST00000396478.3@IPP ENST00000396478.3 protein_coding 45750597,45746120,45740901,45729614,45727631,45719203,45716895,45714246,45698711 45750649,45746461,45741332,45729769,45727798,45719340,45717017,45714466,45700190 Gene ID= ENSG00000197429.10 TPM= 16.83 Transcript Type= protein_coding chr1 45913552 46036124 45913552 46036124 + transcript3484.chr1.nic@MAST2 transcript3484.chr1.nic protein_coding 45913552,45917339,45959386,45997724,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538 45913714,45917533,45959477,45997799,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124 Gene ID= ENSG00000086015.20 TPM= 2.26 Transcript Type= NA chr1 45803580 46025318 45803580 46025318 + transcript3486.chr1.nic@MAST2 transcript3486.chr1.nic protein_coding 45803580,45824433,45829439,45882364,45959386,45997724,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772 45804072,45824580,45829581,45882395,45959477,45997799,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46025318 Gene ID= ENSG00000086015.20 TPM= 1.81 Transcript Type= NA chr1 45803613 46036124 45803613 46036124 + ENST00000361297.6@MAST2 ENST00000361297.6 protein_coding 45803613,45824433,45829439,45882364,45959386,45997724,46002805,46006241,46008296,46010730,46019596,46021950,46022910,46023233,46023772,46025677,46027731,46028768,46029466,46029831,46030129,46030607,46031007,46031391,46032178,46032596,46033802,46034073,46034538 45804072,45824580,45829581,45882395,45959477,45997799,46002883,46006395,46008371,46010939,46019697,46022082,46022971,46023318,46023980,46025815,46027863,46028933,46029567,46029953,46030238,46030761,46031290,46031585,46032404,46032718,46033938,46034266,46036124 Gene ID= ENSG00000086015.20 TPM= 11.32 Transcript Type= protein_coding chr1 46040142 46133036 46040142 46133036 - ENST00000420542.5@PIK3R3 ENST00000420542.5 protein_coding 46132784,46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040142 46133036,46131956,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871 Gene ID= ENSG00000117461.14 TPM= 3.02 Transcript Type= protein_coding chr1 46040140 46132642 46040140 46132642 - ENST00000262741.9@PIK3R3 ENST00000262741.9 protein_coding 46131847,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040140 46132642,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871 Gene ID= ENSG00000117461.14 TPM= 26.56 Transcript Type= protein_coding chr1 46040142 46174934 46040142 46174934 - transcript3491.chr1.nnic@AL358075.4 transcript3491.chr1.nnic protein_coding 46174837,46080642,46077515,46066911,46066054,46061929,46055795,46046551,46045918,46040142 46174934,46080750,46077613,46067091,46066179,46062071,46055971,46046625,46046088,46043871 Gene ID= ENSG00000278139.1 TPM= 3.92 Transcript Type= NA chr1 46183414 46185961 46183414 46185961 + transcript3498.chr1.nic@TSPAN1 transcript3498.chr1.nic protein_coding 46183414,46184191,46184594,46184785,46184960,46185225,46185486 46183683,46184397,46184668,46184883,46185115,46185308,46185961 Gene ID= ENSG00000117472.9 TPM= 5.43 Transcript Type= NA chr1 46188682 46198472 46188682 46198472 - transcript3501.chr1.nic@POMGNT1 transcript3501.chr1.nic protein_coding 46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46189242,46188682 46198472,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357,46188980 Gene ID= ENSG00000085998.13 TPM= 8.15 Transcript Type= NA chr1 46188682 46198472 46188682 46198472 - transcript3512.chr1.nic@POMGNT1 transcript3512.chr1.nic protein_coding 46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188682 46198472,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46188980 Gene ID= ENSG00000085998.13 TPM= 7.24 Transcript Type= NA chr1 46188683 46198443 46188683 46198443 - ENST00000371984.7@POMGNT1 ENST00000371984.7 protein_coding 46198336,46197702,46196970,46196731,46196012,46195811,46194844,46194553,46194274,46193855,46193564,46193305,46193174,46192900,46192518,46192308,46192098,46190720,46190473,46189854,46189458,46188683 46198443,46197871,46197084,46196849,46196077,46195924,46194961,46194651,46194401,46193925,46193639,46193388,46193215,46192958,46192590,46192436,46192223,46190784,46190517,46189989,46189567,46189357 Gene ID= ENSG00000085998.13 TPM= 184.73 Transcript Type= protein_coding chr1 46203334 46221261 46203334 46221261 + ENST00000371980.3@LURAP1 ENST00000371980.3 protein_coding 46203334,46219699 46203624,46221261 Gene ID= ENSG00000171357.5 TPM= 11.77 Transcript Type= protein_coding chr1 46247732 46278472 46247732 46278472 + ENST00000371975.8@RAD54L ENST00000371975.8 protein_coding 46247732,46248512,46250000,46258686,46259964,46260542,46260727,46261261,46267459,46270659,46272466,46272672,46273355,46273624,46274138,46274538,46277817,46278072 46248408,46248598,46250119,46258746,46260099,46260611,46261015,46261385,46267609,46270785,46272540,46272802,46273465,46273747,46274216,46274717,46277980,46278472 Gene ID= ENSG00000085999.11 TPM= 2.72 Transcript Type= protein_coding chr1 46277462 46303608 46277462 46303608 - ENST00000617190.4@LRRC41 ENST00000617190.4 protein_coding 46303124,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46277462 46303608,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084 Gene ID= ENSG00000132128.16 TPM= 253.33 Transcript Type= protein_coding chr1 46278397 46302075 46278397 46302075 - transcript3546.chr1.nnic@LRRC41 transcript3546.chr1.nnic protein_coding 46302000,46298284,46297563,46285362,46281125,46280396,46280192,46279492,46279182,46278397 46302075,46298370,46297633,46286499,46281385,46280560,46280290,46279614,46279257,46279084 Gene ID= ENSG00000132128.16 TPM= 10.64 Transcript Type= NA chr1 46303631 46316776 46303631 46316776 + ENST00000311672.9@UQCRH ENST00000311672.9 protein_coding 46303631,46309101,46310155,46316552 46303820,46309127,46310316,46316776 Gene ID= ENSG00000173660.11 TPM= 58.56 Transcript Type= protein_coding chr1 46303709 46316776 46303709 46316776 + ENST00000496387.5@UQCRH ENST00000496387.5 protein_coding 46303709,46309101,46309897,46310155,46316552 46303820,46309127,46310044,46310316,46316776 Gene ID= ENSG00000173660.11 TPM= 17.81 Transcript Type= nonsense_mediated_decay chr1 46303698 46316776 46303698 46316776 + ENST00000489056.5@UQCRH ENST00000489056.5 protein_coding 46303698,46309101,46310155,46316552 46303820,46309143,46310316,46316776 Gene ID= ENSG00000173660.11 TPM= 1.51 Transcript Type= nonsense_mediated_decay chr1 46394265 46413842 46394265 46413842 + transcript3571.chr1.nnic@FAAH transcript3571.chr1.nnic protein_coding 46394265,46402091,46405014,46405372,46405588,46405871,46406038,46406244,46408459,46409101,46410398,46411612,46412143,46413075,46413447 46394543,46402204,46405148,46405505,46405794,46405952,46406078,46406368,46408584,46409198,46410854,46411651,46412251,46413220,46413842 Gene ID= ENSG00000117480.15 TPM= 3.62 Transcript Type= NA chr1 46394265 46413842 46394265 46413842 + transcript3574.chr1.nic@FAAH transcript3574.chr1.nic protein_coding 46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413123,46413447 46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413842 Gene ID= ENSG00000117480.15 TPM= 6.34 Transcript Type= NA chr1 46394265 46415754 46394265 46415754 + transcript3586.chr1.nic@FAAH transcript3586.chr1.nic protein_coding 46394265,46402091,46405014,46405372,46405588,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413075,46413447 46394543,46402204,46405148,46405505,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46415754 Gene ID= ENSG00000117480.15 TPM= 9.96 Transcript Type= NA chr1 46394265 46413845 46394265 46413845 + ENST00000243167.8@FAAH ENST00000243167.8 protein_coding 46394265,46402091,46405014,46405372,46405588,46406038,46406244,46408459,46409101,46410398,46410814,46411612,46412143,46413075,46413447 46394543,46402204,46405148,46405505,46405794,46406078,46406368,46408584,46409198,46410497,46410854,46411651,46412251,46413220,46413845 Gene ID= ENSG00000117480.15 TPM= 57.95 Transcript Type= protein_coding chr1 46557408 46604293 46557408 46604293 - transcript3616.chr1.nic@MKNK1 transcript3616.chr1.nic protein_coding 46604227,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557408 46604293,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800 Gene ID= ENSG00000079277.19 TPM= 9.35 Transcript Type= NA chr1 46557408 46604278 46557408 46604278 - transcript3621.chr1.nic@MKNK1 transcript3621.chr1.nic protein_coding 46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46557408 46604278,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46558800 Gene ID= ENSG00000079277.19 TPM= 9.35 Transcript Type= NA chr1 46557419 46604237 46557419 46604237 - ENST00000371945.8@MKNK1 ENST00000371945.8 protein_coding 46604185,46594113,46583228,46580530,46576575,46574947,46572063,46568443,46565041,46562649,46561478,46560234,46557419 46604237,46594280,46583329,46580627,46576654,46575020,46572167,46568498,46565136,46562843,46561642,46560277,46558800 Gene ID= ENSG00000079277.19 TPM= 9.35 Transcript Type= protein_coding chr1 46607715 46616891 46607715 46616891 - ENST00000319928.7@MOB3C ENST00000319928.7 protein_coding 46616711,46612904,46610002,46607715 46616891,46613371,46610204,46609684 Gene ID= ENSG00000142961.14 TPM= 42.56 Transcript Type= protein_coding chr1 46632740 46668522 46632740 46668522 - transcript3634.chr1.nic@ATPAF1 transcript3634.chr1.nic protein_coding 46668057,46665256,46658687,46658127,46652581,46645161,46643194,46632740 46668522,46665364,46658737,46658189,46652628,46645256,46643301,46635970 Gene ID= ENSG00000123472.12 TPM= 28.98 Transcript Type= NA chr1 46675161 46719157 46675161 46719157 - transcript3632.chr1.nic@EFCAB14 transcript3632.chr1.nic protein_coding 46717903,46716295,46707906,46696551,46691827,46689587,46686784,46684491,46683300,46675161 46719157,46716443,46708051,46696649,46691937,46689691,46686870,46684602,46683425,46678636 Gene ID= ENSG00000159658.10 TPM= 43.47 Transcript Type= NA chr1 46675159 46719064 46675159 46719064 - ENST00000371933.7@EFCAB14 ENST00000371933.7 protein_coding 46717903,46716295,46707906,46696551,46691827,46689587,46688353,46686784,46684491,46683300,46675159 46719064,46716443,46708051,46696649,46691937,46689691,46688544,46686870,46684602,46683425,46678636 Gene ID= ENSG00000159658.10 TPM= 19.92 Transcript Type= protein_coding chr1 47023568 47050751 47023568 47050751 + ENST00000371901.3@CYP4X1 ENST00000371901.3 protein_coding 47023568,47029990,47031436,47033241,47035806,47036017,47038660,47039342,47046467,47048565,47049422,47050000 47023994,47030131,47031480,47033368,47035933,47036171,47038766,47039532,47046600,47048629,47049504,47050751 Gene ID= ENSG00000186377.7 TPM= 1.81 Transcript Type= protein_coding chr1 47183593 47190055 47183593 47190055 - ENST00000294338.6@PDZK1IP1 ENST00000294338.6 protein_coding 47189866,47187319,47185002,47183593 47190055,47187427,47185097,47184043 Gene ID= ENSG00000162366.7 TPM= 5.43 Transcript Type= protein_coding chr1 47333797 47378839 47333797 47378839 + ENST00000371873.9@CMPK1 ENST00000371873.9 protein_coding 47333797,47368469,47372955,47374909,47375197,47376704 47334116,47368615,47373107,47374985,47375293,47378839 Gene ID= ENSG00000162368.13 TPM= 189.26 Transcript Type= protein_coding chr1 47432137 47437669 47432137 47437669 - transcript3657.chr1.nnic@FOXD2-AS1 transcript3657.chr1.nnic antisense_RNA 47437089,47436109,47432137 47437669,47436233,47434641 Gene ID= ENSG00000237424.1 TPM= 2.72 Transcript Type= NA chr1 47765640 47997376 47765640 47997376 - transcript3660.chr1.nnic@TRABD2B transcript3660.chr1.nnic protein_coding 47996688,47994034,47801473,47794586,47778454,47775170,47765640 47997376,47994597,47801619,47794760,47778544,47775439,47766203 Gene ID= ENSG00000269113.3 TPM= 1.81 Transcript Type= NA chr1 48295374 48472208 48295374 48472208 - ENST00000396199.7@SPATA6 ENST00000396199.7 protein_coding 48471958,48452994,48451552,48411464,48403802,48399351,48395267,48385309,48359586,48355670,48305787,48295374 48472208,48453131,48451600,48411588,48403882,48399644,48395354,48385349,48359770,48355769,48305878,48298893 Gene ID= ENSG00000132122.11 TPM= 2.72 Transcript Type= protein_coding chr1 48727870 48776830 48727870 48776830 - transcript3676.chr1.nnic@BEND5 transcript3676.chr1.nnic protein_coding 48776606,48773060,48761337,48758900,48742623,48736239,48727870 48776830,48773136,48761470,48759284,48742771,48736452,48728043 Gene ID= ENSG00000162373.12 TPM= 1.81 Transcript Type= NA chr1 50960745 50974633 50960745 50974633 + ENST00000262662.5@CDKN2C ENST00000262662.5 protein_coding 50960745,50967936,50970358,50973893 50960803,50969899,50970497,50974633 Gene ID= ENSG00000123080.10 TPM= 12.68 Transcript Type= protein_coding chr1 51236281 51273445 51236281 51273445 + transcript3697.chr1.nnic@RNF11 transcript3697.chr1.nnic protein_coding 51236281,51236500,51269956,51271151 51236456,51236879,51270125,51273445 Gene ID= ENSG00000123091.4 TPM= 11.77 Transcript Type= NA chr1 51236271 51273455 51236271 51273455 + ENST00000242719.3@RNF11 ENST00000242719.3 protein_coding 51236271,51269956,51271151 51236879,51270125,51273455 Gene ID= ENSG00000123091.4 TPM= 157.56 Transcript Type= protein_coding chr1 51287113 51330789 51287113 51330789 - transcript3703.chr1.nic@TTC39A transcript3703.chr1.nic protein_coding 51330437,51321721,51312812,51312119,51311254,51309261,51305977,51305081,51303084,51302506,51302357,51301572,51296079,51294391,51290514,51290005,51288839,51287113 51330789,51321825,51312943,51312195,51311321,51309325,51306076,51305146,51303192,51302573,51302416,51301733,51296170,51294511,51290625,51290119,51288955,51288280 Gene ID= ENSG00000085831.15 TPM= 16.3 Transcript Type= NA chr1 51354264 51519273 51354264 51519273 - transcript3735.chr1.nnic@EPS15 transcript3735.chr1.nnic protein_coding 51519199,51481273,51472859,51471690,51468473,51465261,51463673,51461091,51447935,51446960,51444889,51440347,51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51354264 51519273,51481314,51472948,51471737,51468568,51465326,51463798,51461150,51448135,51447105,51445045,51440432,51421858,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846 Gene ID= ENSG00000085832.16 TPM= 5.89 Transcript Type= NA chr1 51354416 51519265 51354416 51519265 - transcript3741.chr1.nnic@EPS15 transcript3741.chr1.nnic protein_coding 51519199,51481273,51472859,51471690,51468473,51465261,51463673,51461091,51448046,51446960,51444889,51440347,51421786,51409535,51408135,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51354416 51519265,51481314,51472948,51471737,51468568,51465326,51463798,51461150,51448135,51447105,51445045,51440432,51421858,51409696,51408332,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846 Gene ID= ENSG00000085832.16 TPM= 4.07 Transcript Type= NA chr1 51354410 51422149 51354410 51422149 - transcript3760.chr1.nic@EPS15 transcript3760.chr1.nic protein_coding 51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51354410 51422149,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846 Gene ID= ENSG00000085832.16 TPM= 5.89 Transcript Type= NA chr1 51354263 51519328 51354263 51519328 - ENST00000371733.7@EPS15 ENST00000371733.7 protein_coding 51519199,51481273,51472859,51471690,51468473,51465261,51463673,51461091,51448046,51446960,51444889,51440347,51421786,51409535,51408135,51405905,51403419,51402435,51400918,51399032,51394381,51365953,51363866,51361171,51354263 51519328,51481314,51472948,51471737,51468568,51465326,51463798,51461150,51448135,51447105,51445045,51440432,51421858,51409696,51408332,51406108,51403532,51402525,51400953,51399165,51394447,51366029,51364028,51361355,51356846 Gene ID= ENSG00000085832.16 TPM= 76.52 Transcript Type= protein_coding chr1 51565515 51570696 51565515 51570696 - transcript3764.chr1.nnic@CALR4P transcript3764.chr1.nnic transcribed_unitary_pseudogene 51570550,51569548,51567174,51565515 51570696,51569750,51567332,51566541 Gene ID= ENSG00000227742.2 TPM= 1.81 Transcript Type= NA chr1 51565515 51570696 51565515 51570696 - transcript3765.chr1.nnic@CALR4P transcript3765.chr1.nnic transcribed_unitary_pseudogene 51570550,51569548,51567174,51565515 51570696,51569750,51567843,51566541 Gene ID= ENSG00000227742.2 TPM= 1.81 Transcript Type= NA chr1 51617109 51788469 51617109 51788469 + ENST00000428468.5@OSBPL9 ENST00000428468.5 protein_coding 51617109,51651991,51669434,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715 51617221,51652041,51669512,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469 Gene ID= ENSG00000117859.18 TPM= 49.7 Transcript Type= protein_coding chr1 51617092 51788469 51617092 51788469 + ENST00000495776.5@OSBPL9 ENST00000495776.5 protein_coding 51617092,51651991,51714003,51745536,51746710,51748369,51750145,51756320,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715 51617221,51652041,51714079,51745631,51746757,51748398,51750195,51756358,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469 Gene ID= ENSG00000117859.18 TPM= 17.1 Transcript Type= nonsense_mediated_decay chr1 51729815 51788469 51729815 51788469 + ENST00000361556.9@OSBPL9 ENST00000361556.9 protein_coding 51729815,51745536,51746710,51748369,51750145,51760690,51761867,51765822,51772070,51772605,51776833,51781164,51782559,51783915,51784264,51784442,51785808,51786526,51787353,51787715 51730001,51745631,51746757,51748398,51750195,51760780,51761971,51765981,51772182,51772723,51776918,51781335,51782643,51784025,51784327,51784582,51785886,51786617,51787488,51788469 Gene ID= ENSG00000117859.18 TPM= 3.51 Transcript Type= protein_coding chr1 51789191 51878805 51789191 51878805 - ENST00000354831.11@NRDC ENST00000354831.11 protein_coding 51878275,51840226,51837487,51836369,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191 51878805,51840514,51837620,51836438,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433 Gene ID= ENSG00000078618.21 TPM= 12.9 Transcript Type= protein_coding chr1 51789191 51878805 51789191 51878805 - ENST00000352171.11@NRDC ENST00000352171.11 protein_coding 51878275,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789191 51878805,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433 Gene ID= ENSG00000078618.21 TPM= 164.13 Transcript Type= protein_coding chr1 51789195 51878727 51789195 51878727 - transcript3721.chr1.nnic@NRDC transcript3721.chr1.nnic protein_coding 51878662,51840226,51836131,51834017,51827796,51825287,51823664,51821498,51819800,51818066,51816312,51814693,51814551,51814035,51811994,51810281,51809315,51806794,51805510,51803814,51800556,51798249,51794823,51794472,51792377,51792046,51791578,51790900,51790533,51789568,51789195 51878727,51840514,51836212,51834170,51827869,51825382,51823786,51821555,51819873,51818135,51816389,51814813,51814609,51814089,51812098,51810404,51809401,51806913,51805561,51803964,51800683,51798411,51794854,51794610,51792424,51792098,51791661,51790990,51790649,51789657,51789433 Gene ID= ENSG00000078618.21 TPM= 6.57 Transcript Type= NA chr1 52020131 52056171 52020131 52056171 - ENST00000371626.8@TXNDC12 ENST00000371626.8 protein_coding 52055000,52041537,52028578,52027275,52024510,52023491,52020131 52056171,52041597,52028630,52027348,52024579,52023574,52021012 Gene ID= ENSG00000117862.11 TPM= 71.54 Transcript Type= protein_coding chr1 52056125 52090716 52056125 52090716 + ENST00000313334.12@BTF3L4 ENST00000313334.12 protein_coding 52056125,52059835,52064825,52083340,52086112,52086712 52056379,52059901,52064938,52083541,52086171,52090716 Gene ID= ENSG00000134717.17 TPM= 70.18 Transcript Type= protein_coding chr1 52056244 52089891 52056244 52089891 + transcript3776.chr1.nic@BTF3L4 transcript3776.chr1.nic protein_coding 52056244,52064825,52086112,52086712 52056379,52064938,52086171,52089891 Gene ID= ENSG00000134717.17 TPM= 6.34 Transcript Type= NA chr1 52056304 52088418 52056304 52088418 + ENST00000472944.6@BTF3L4 ENST00000472944.6 protein_coding 52056304,52064825,52083340,52086112,52086712 52056379,52064938,52083541,52086171,52088418 Gene ID= ENSG00000134717.17 TPM= 21.28 Transcript Type= protein_coding chr1 52056271 52087155 52056271 52087155 + ENST00000489308.6@BTF3L4 ENST00000489308.6 protein_coding 52056271,52059835,52064825,52086112,52086712 52056379,52059901,52064938,52086171,52087155 Gene ID= ENSG00000134717.17 TPM= 5.43 Transcript Type= protein_coding chr1 52141889 52335206 52141889 52335206 + transcript3791.chr1.nic@ZFYVE9 transcript3791.chr1.nic protein_coding 52141889,52216369,52233171,52237488,52263773,52266655,52268463,52274464,52278492,52281661,52293453,52295895,52303821,52332768,52334688 52142403,52216474,52233276,52239595,52263872,52266831,52268632,52274584,52278614,52281816,52293677,52295977,52303925,52332918,52335206 Gene ID= ENSG00000157077.14 TPM= 1.81 Transcript Type= NA chr1 52345715 52366134 52345715 52366134 - transcript3779.chr1.nnic@CC2D1B transcript3779.chr1.nnic protein_coding 52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353603,52345715 52366134,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52346203 Gene ID= ENSG00000154222.14 TPM= 1.81 Transcript Type= NA chr1 52352524 52366162 52352524 52366162 - transcript3784.chr1.nic@CC2D1B transcript3784.chr1.nic protein_coding 52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352524 52366162,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357916,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223 Gene ID= ENSG00000154222.14 TPM= 2.11 Transcript Type= NA chr1 52352533 52366156 52352533 52366156 - transcript3786.chr1.nic@CC2D1B transcript3786.chr1.nic protein_coding 52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52352533 52366156,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647 Gene ID= ENSG00000154222.14 TPM= 2.11 Transcript Type= NA chr1 52352532 52366179 52352532 52366179 - ENST00000284376.7@CC2D1B ENST00000284376.7 protein_coding 52366069,52364552,52362602,52361513,52360974,52360424,52360074,52359705,52359459,52359250,52359027,52358686,52358331,52357781,52357526,52357001,52356384,52356186,52355771,52355608,52355398,52354840,52354608,52353518,52352532 52366179,52364634,52362746,52361616,52361132,52360549,52360233,52359883,52359534,52359357,52359157,52358758,52358461,52357898,52357698,52357126,52356442,52356302,52355844,52355666,52355449,52354939,52354698,52353647,52353223 Gene ID= ENSG00000154222.14 TPM= 21.13 Transcript Type= protein_coding chr1 52372829 52404459 52372829 52404459 - ENST00000371568.7@ORC1 ENST00000371568.7 protein_coding 52404246,52402129,52401362,52397685,52396046,52393443,52389217,52388442,52385852,52385161,52384550,52383830,52383420,52381642,52375430,52374810,52372829 52404459,52402228,52401489,52397863,52396364,52393803,52389321,52388637,52385949,52385262,52384721,52383937,52383569,52381761,52375599,52374897,52373375 Gene ID= ENSG00000085840.12 TPM= 1.81 Transcript Type= protein_coding chr1 52404564 52420839 52404564 52420839 + ENST00000257181.9@PRPF38A ENST00000257181.9 protein_coding 52404564,52405680,52408569,52411115,52412514,52413879,52414621,52414762,52415338,52416648 52404879,52405839,52408690,52411200,52412624,52413991,52414647,52414859,52415386,52420839 Gene ID= ENSG00000134748.12 TPM= 26.26 Transcript Type= protein_coding chr1 52423278 52553092 52423278 52553092 - transcript3794.chr1.nic@ZCCHC11 transcript3794.chr1.nic protein_coding 52552931,52525563,52515891,52509596,52497006,52495427,52493611,52490732,52488909,52481804,52481423,52477708,52474832,52471952,52468181,52465070,52461712,52461513,52461134,52458336,52446590,52446265,52445957,52445787,52438220,52436755,52435365,52431013,52425349,52423278 52553092,52526373,52516054,52509712,52497183,52495515,52493662,52490801,52489035,52481923,52481635,52477882,52475535,52472102,52468267,52465173,52461769,52461616,52461223,52458449,52446667,52446442,52446004,52445869,52438335,52436963,52435465,52431460,52425507,52423913 Gene ID= ENSG00000134744.13 TPM= 1.81 Transcript Type= NA chr1 52423278 52553090 52423278 52553090 - transcript3795.chr1.nic@ZCCHC11 transcript3795.chr1.nic protein_coding 52552931,52525563,52515891,52509596,52497006,52495427,52493611,52490732,52488909,52481804,52481423,52477708,52474832,52471952,52468181,52465070,52461712,52461513,52461134,52458336,52446590,52446265,52445957,52445787,52438220,52436755,52435365,52431013,52425349,52423278 52553090,52526373,52516054,52509712,52497183,52495515,52493662,52490801,52489035,52481923,52481635,52477882,52475535,52472102,52468267,52465173,52461769,52461616,52461223,52458449,52446667,52446442,52446004,52445869,52438335,52436963,52435465,52431460,52425507,52424002 Gene ID= ENSG00000134744.13 TPM= 4.98 Transcript Type= NA chr1 52423275 52553100 52423275 52553100 - ENST00000371544.7@ZCCHC11 ENST00000371544.7 protein_coding 52552931,52525563,52515891,52509596,52497006,52495427,52493611,52490732,52488909,52481804,52481423,52477708,52474832,52471952,52468181,52465070,52461712,52461513,52461134,52458336,52446590,52446265,52445957,52445787,52438220,52436755,52435365,52431013,52425349,52423275 52553100,52526373,52516054,52509712,52497183,52495515,52493662,52490801,52489035,52481923,52481635,52477882,52475535,52472102,52468267,52465173,52461769,52461616,52461223,52458449,52446667,52446442,52446004,52445869,52438335,52436975,52435465,52431460,52425507,52424002 Gene ID= ENSG00000134744.13 TPM= 7.7 Transcript Type= protein_coding chr1 52602372 52609051 52602372 52609051 + ENST00000361314.4@GPX7 ENST00000361314.4 protein_coding 52602372,52606684,52608262 52602547,52606945,52609051 Gene ID= ENSG00000116157.5 TPM= 12.68 Transcript Type= protein_coding chr1 52684451 52698366 52684451 52698366 - ENST00000371538.4@COA7 ENST00000371538.4 protein_coding 52698221,52692727,52684451 52698366,52692867,52688168 Gene ID= ENSG00000162377.5 TPM= 5.43 Transcript Type= protein_coding chr1 52726452 52771941 52726452 52771941 + transcript3806.chr1.nic@ZYG11B transcript3806.chr1.nic protein_coding 52726452,52756458,52771020 52726683,52756623,52771941 Gene ID= ENSG00000162378.12 TPM= 1.81 Transcript Type= NA chr1 52896233 52921706 52896233 52921706 - transcript3814.chr1.nic@ECHDC2 transcript3814.chr1.nic protein_coding 52921553,52913895,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52896233 52921706,52914095,52911790,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597 Gene ID= ENSG00000121310.16 TPM= 2.72 Transcript Type= NA chr1 52896233 52921748 52896233 52921748 - transcript3821.chr1.nic@ECHDC2 transcript3821.chr1.nic protein_coding 52921553,52913895,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896233 52921748,52914095,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597 Gene ID= ENSG00000121310.16 TPM= 2.72 Transcript Type= NA chr1 52895912 52921803 52895912 52921803 - transcript3830.chr1.nic@ECHDC2 transcript3830.chr1.nic protein_coding 52921553,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52895912 52921803,52911790,52911653,52907954,52906611,52904833,52899224,52897484,52896597 Gene ID= ENSG00000121310.16 TPM= 5.43 Transcript Type= NA chr1 52895984 52921767 52895984 52921767 - ENST00000371522.8@ECHDC2 ENST00000371522.8 protein_coding 52921553,52911723,52911566,52907868,52906519,52905034,52904646,52899174,52897437,52895984 52921767,52911790,52911653,52907954,52906611,52905090,52904833,52899224,52897484,52896597 Gene ID= ENSG00000121310.16 TPM= 37.72 Transcript Type= protein_coding chr1 52896233 52921726 52896233 52921726 - ENST00000358358.9@ECHDC2 ENST00000358358.9 protein_coding 52921553,52911723,52911566,52907868,52905034,52904646,52899174,52897437,52896233 52921726,52911790,52911653,52907954,52905090,52904833,52899224,52897484,52896597 Gene ID= ENSG00000121310.16 TPM= 29.57 Transcript Type= protein_coding chr1 52927229 53051703 52927229 53051703 + ENST00000371514.7@SCP2 ENST00000371514.7 protein_coding 52927229,52941796,52948009,52950755,52954740,52961503,52974769,52976683,52978217,52980396,52988029,53014890,53027969,53038917,53047858,53050609 52927465,52941853,52948080,52950886,52954804,52961629,52974832,52976769,52978367,52980543,52988136,53015043,53028071,53039046,53047937,53051703 Gene ID= ENSG00000116171.17 TPM= 153.49 Transcript Type= protein_coding chr1 53062213 53085502 53062213 53085502 + ENST00000312553.9@PODN ENST00000312553.9 protein_coding 53062213,53069801,53071535,53074606,53075862,53077190,53077685,53078365,53080728,53081981,53084513 53062308,53070167,53071628,53074670,53075971,53077346,53077800,53079022,53080876,53082188,53085502 Gene ID= ENSG00000174348.13 TPM= 13.58 Transcript Type= protein_coding chr1 53196429 53214197 53196429 53214197 + ENST00000371486.3@CPT2 ENST00000371486.3 protein_coding 53196429,53200719,53202323,53210015,53213264 53197095,53200799,53202429,53211319,53214197 Gene ID= ENSG00000157184.6 TPM= 110.48 Transcript Type= protein_coding chr1 53196800 53214177 53196800 53214177 + ENST00000637252.1@CPT2 ENST00000637252.1 protein_coding 53196800,53200719,53202323,53210015,53212781,53213264 53197095,53200799,53202429,53211319,53212816,53214177 Gene ID= ENSG00000157184.6 TPM= 1.81 Transcript Type= protein_coding chr1 53196792 53214178 53196792 53214178 + ENST00000636867.1@CPT2 ENST00000636867.1 protein_coding 53196792,53200719,53202323,53210015,53213264 53197095,53200799,53202429,53211250,53214178 Gene ID= ENSG00000157184.6 TPM= 10.87 Transcript Type= protein_coding chr1 53213356 53220634 53213356 53220634 - transcript3866.chr1.nic@C1orf123 transcript3866.chr1.nic protein_coding 53218414,53218172,53216782,53215991,53213356 53220634,53218203,53216859,53216056,53214736 Gene ID= ENSG00000162384.13 TPM= 4.53 Transcript Type= NA chr1 53214099 53220617 53214099 53220617 - ENST00000294360.4@C1orf123 ENST00000294360.4 protein_coding 53220570,53220261,53218867,53218414,53218172,53216782,53215991,53214099 53220617,53220344,53218923,53218495,53218203,53216859,53216056,53214736 Gene ID= ENSG00000162384.13 TPM= 27.17 Transcript Type= protein_coding chr1 53226892 53238610 53226892 53238610 - ENST00000371470.7@MAGOH ENST00000371470.7 protein_coding 53238361,53235577,53233542,53228872,53226892 53238610,53235635,53233652,53228954,53227144 Gene ID= ENSG00000162385.10 TPM= 9.96 Transcript Type= protein_coding chr1 53226926 53238499 53226926 53238499 - ENST00000371466.4@MAGOH ENST00000371466.4 protein_coding 53238361,53235577,53228872,53226926 53238499,53235635,53228954,53227144 Gene ID= ENSG00000162385.10 TPM= 7.24 Transcript Type= protein_coding chr1 53238610 53242783 53238610 53242783 + ENST00000458151.1@AL606760.1 ENST00000458151.1 antisense_RNA 53238610,53241847,53242438 53239345,53241945,53242783 Gene ID= ENSG00000226754.1 TPM= 2.72 Transcript Type= antisense_RNA chr1 53765460 53838860 53765460 53838860 - ENST00000371429.3@NDC1 ENST00000371429.3 protein_coding 53838205,53835500,53832490,53827999,53825798,53818971,53809695,53807656,53806425,53803928,53800693,53796899,53796689,53793229,53789133,53787158,53772329,53765460 53838860,53835620,53832591,53828173,53825936,53819079,53809746,53807791,53806517,53804009,53800848,53797144,53796804,53793279,53789196,53787258,53772489,53768033 Gene ID= ENSG00000058804.11 TPM= 7.24 Transcript Type= protein_coding chr1 53765463 53838330 53765463 53838330 - transcript3875.chr1.nic@NDC1 transcript3875.chr1.nic protein_coding 53838205,53832490,53827999,53825798,53818971,53809695,53807656,53806425,53803928,53800693,53796899,53796689,53793229,53789133,53787158,53772329,53765463 53838330,53832591,53828173,53825936,53819079,53809746,53807791,53806517,53804009,53800848,53797144,53796804,53793279,53789196,53787258,53772489,53768033 Gene ID= ENSG00000058804.11 TPM= 3.62 Transcript Type= NA chr1 53851733 53889811 53851733 53889811 - transcript3887.chr1.nic@YIPF1 transcript3887.chr1.nic protein_coding 53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851733 53889811,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270 Gene ID= ENSG00000058799.14 TPM= 23.54 Transcript Type= NA chr1 53851720 53889809 53851720 53889809 - transcript3892.chr1.nic@YIPF1 transcript3892.chr1.nic protein_coding 53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851720 53889809,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270 Gene ID= ENSG00000058799.14 TPM= 12.68 Transcript Type= NA chr1 53851719 53889733 53851719 53889733 - ENST00000464950.6@YIPF1 ENST00000464950.6 protein_coding 53889713,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53855001,53851719 53889733,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53855051,53852270 Gene ID= ENSG00000058799.14 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr1 53851733 53889834 53851733 53889834 - ENST00000072644.6@YIPF1 ENST00000072644.6 protein_coding 53889713,53889244,53888907,53883113,53878642,53878315,53871372,53866758,53866200,53860056,53851733 53889834,53889463,53888986,53883276,53878722,53878402,53871488,53866924,53866382,53860153,53852270 Gene ID= ENSG00000058799.14 TPM= 14.49 Transcript Type= protein_coding chr1 53921561 53945929 53921561 53945929 - ENST00000194214.9@HSPB11 ENST00000194214.9 protein_coding 53945555,53939985,53930039,53928372,53923904,53921561 53945929,53940097,53930145,53928440,53923947,53921767 Gene ID= ENSG00000081870.11 TPM= 22.19 Transcript Type= protein_coding chr1 53921557 53946305 53921557 53946305 - transcript3903.chr1.nnic@HSPB11 transcript3903.chr1.nnic protein_coding 53946237,53939985,53930039,53928372,53923904,53921557 53946305,53940097,53930145,53928440,53923947,53921767 Gene ID= ENSG00000081870.11 TPM= 19.47 Transcript Type= NA chr1 53946317 53968166 53946317 53968166 + transcript3897.chr1.nic@LRRC42 transcript3897.chr1.nic protein_coding 53946317,53947862,53951986,53958149,53960356,53962034,53962296,53966296,53967665 53946549,53947981,53952472,53958280,53960474,53962122,53962409,53966380,53968166 Gene ID= ENSG00000116212.14 TPM= 8.9 Transcript Type= NA chr1 53946643 53968627 53946643 53968627 + transcript3898.chr1.nnic@LRRC42 transcript3898.chr1.nnic protein_coding 53946643,53947788,53951986,53958149,53960356,53962034,53962296,53966296,53967665 53946688,53947821,53952472,53958280,53960474,53962122,53962409,53966380,53968627 Gene ID= ENSG00000116212.14 TPM= 5.28 Transcript Type= NA chr1 53946309 53968166 53946309 53968166 + transcript3900.chr1.nnic@LRRC42 transcript3900.chr1.nnic protein_coding 53946309,53951986,53960356,53962034,53962296,53966296,53967665 53946549,53952472,53960474,53962122,53962409,53966380,53968166 Gene ID= ENSG00000116212.14 TPM= 3.17 Transcript Type= NA chr1 53946353 53968168 53946353 53968168 + ENST00000319223.8@LRRC42 ENST00000319223.8 protein_coding 53946353,53951986,53958149,53960356,53962034,53962296,53966296,53967665 53946549,53952472,53958280,53960474,53962122,53962409,53966380,53968168 Gene ID= ENSG00000116212.14 TPM= 34.26 Transcript Type= protein_coding chr1 54026681 54053438 54026681 54053438 - ENST00000234831.9@TMEM59 ENST00000234831.9 protein_coding 54053000,54047267,54045692,54043373,54041724,54040756,54036610,54026681 54053438,54047372,54045786,54043525,54041805,54040837,54036718,54032305 Gene ID= ENSG00000116209.11 TPM= 515.86 Transcript Type= protein_coding chr1 54200167 54218383 54200167 54218383 + ENST00000360840.9@MRPL37 ENST00000360840.9 protein_coding 54200167,54205018,54205295,54209946,54212501,54216141,54218172 54200589,54205201,54205410,54210131,54212658,54216344,54218383 Gene ID= ENSG00000116221.15 TPM= 116.36 Transcript Type= protein_coding chr1 54200196 54225464 54200196 54225464 + ENST00000605337.5@MRPL37 ENST00000605337.5 protein_coding 54200196,54205018,54205295,54209946,54212501,54216141,54225125 54200589,54205201,54205410,54210131,54212658,54216344,54225464 Gene ID= ENSG00000116221.15 TPM= 3.62 Transcript Type= protein_coding chr1 54225315 54228676 54225315 54228676 - transcript3931.chr1.nic@SSBP3 transcript3931.chr1.nic protein_coding 54228449,54228255,54225315 54228676,54228356,54227160 Gene ID= ENSG00000157216.15 TPM= 7.24 Transcript Type= NA chr1 54225433 54406395 54225433 54406395 - ENST00000610401.4@SSBP3 ENST00000610401.4 protein_coding 54405953,54404858,54404576,54401861,54281438,54257127,54251794,54251616,54243235,54242164,54241474,54240905,54239129,54228748,54228449,54228255,54227134,54225433 54406395,54404930,54404637,54401945,54281527,54257186,54251860,54251692,54243299,54242212,54241509,54240959,54239199,54228826,54228477,54228356,54227160,54227130 Gene ID= ENSG00000157216.15 TPM= 9.06 Transcript Type= protein_coding chr1 54548228 54610327 54548228 54610327 + ENST00000343744.6@ACOT11 ENST00000343744.6 protein_coding 54548228,54584655,54585835,54592546,54593941,54594556,54597259,54599296,54601269,54602669,54603871,54604346,54605076,54607134,54607942,54608957 54548342,54584862,54585904,54592606,54594039,54594691,54597415,54599415,54601413,54602724,54603937,54604429,54605209,54607265,54608068,54610327 Gene ID= ENSG00000162390.17 TPM= 12.68 Transcript Type= protein_coding chr1 54715801 54742302 54715801 54742302 + transcript3942.chr1.nnic@TTC4 transcript3942.chr1.nnic protein_coding 54715801,54716600,54717492,54721163,54722675,54728346,54731486,54737582,54741411 54716019,54716717,54717653,54721240,54722799,54728432,54731700,54737664,54742302 Gene ID= ENSG00000243725.6 TPM= 1.81 Transcript Type= NA chr1 54715822 54742657 54715822 54742657 + ENST00000371281.3@TTC4 ENST00000371281.3 protein_coding 54715822,54716600,54717492,54721163,54722675,54728346,54731486,54733629,54737582,54741411 54716019,54716717,54717653,54721240,54722799,54728432,54731700,54733710,54737664,54742657 Gene ID= ENSG00000243725.6 TPM= 38.03 Transcript Type= protein_coding chr1 54756898 54764514 54756898 54764514 - ENST00000371279.3@PARS2 ENST00000371279.3 protein_coding 54764461,54756898 54764514,54759190 Gene ID= ENSG00000162396.5 TPM= 28.98 Transcript Type= protein_coding chr1 54779712 54801267 54779712 54801267 - ENST00000371276.8@TTC22 ENST00000371276.8 protein_coding 54800597,54788042,54787711,54786957,54785983,54782325,54779712 54801267,54788097,54787826,54787075,54786144,54782477,54781779 Gene ID= ENSG00000006555.10 TPM= 5.43 Transcript Type= protein_coding chr1 54849633 54887218 54849633 54887218 - ENST00000371269.7@DHCR24 ENST00000371269.7 protein_coding 54886889,54883618,54875942,54875093,54871350,54865303,54854037,54853434,54849633 54887218,54883773,54876047,54875211,54871613,54865446,54854234,54853612,54852386 Gene ID= ENSG00000116133.11 TPM= 6346.01 Transcript Type= protein_coding chr1 54849629 54887200 54849629 54887200 - transcript4033.chr1.nnic@DHCR24 transcript4033.chr1.nnic protein_coding 54886889,54883618,54875942,54875093,54871350,54865371,54849629 54887200,54883773,54876047,54875211,54871613,54865446,54849760 Gene ID= ENSG00000116133.11 TPM= 499.03 Transcript Type= NA chr1 54980608 54992292 54980608 54992292 + transcript4064.chr1.nnic@TMEM61 transcript4064.chr1.nnic protein_coding 54980608,54980954,54986097,54991836 54980668,54981080,54986446,54992292 Gene ID= ENSG00000143001.4 TPM= 3.17 Transcript Type= NA chr1 54980612 54992292 54980612 54992292 + transcript4067.chr1.nnic@TMEM61 transcript4067.chr1.nnic protein_coding 54980612,54986097,54991836 54980668,54986446,54992292 Gene ID= ENSG00000143001.4 TPM= 4.07 Transcript Type= NA chr1 56494747 56579568 56494747 56579568 - ENST00000371250.3@PLPP3 ENST00000371250.3 protein_coding 56578878,56536955,56524277,56523823,56511976,56494747 56579568,56537112,56524554,56523880,56512152,56496676 Gene ID= ENSG00000162407.8 TPM= 67.92 Transcript Type= protein_coding chr1 56645322 56715335 56645322 56715335 + ENST00000371244.8@PRKAA2 ENST00000371244.8 protein_coding 56645322,56674381,56691394,56692358,56693765,56695935,56703971,56706092,56707475 56645481,56674522,56691487,56692502,56693852,56696159,56704475,56706218,56715335 Gene ID= ENSG00000162409.10 TPM= 1.81 Transcript Type= protein_coding chr1 58480720 58546731 58480720 58546731 - transcript4080.chr1.nic@OMA1 transcript4080.chr1.nic protein_coding 58546664,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480720 58546731,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174 Gene ID= ENSG00000162600.11 TPM= 4.98 Transcript Type= NA chr1 58480719 58546800 58480719 58546800 - ENST00000371226.7@OMA1 ENST00000371226.7 protein_coding 58546703,58538795,58536513,58534158,58533953,58530601,58527261,58506060,58480719 58546800,58539310,58536741,58534331,58534060,58530729,58527335,58506209,58481174 Gene ID= ENSG00000162600.11 TPM= 9.51 Transcript Type= protein_coding chr1 58785123 58901120 58785123 58901120 + transcript4094.chr1.nnic@LINC01135 transcript4094.chr1.nnic lincRNA 58785123,58893545,58899047 58785305,58893717,58901120 Gene ID= ENSG00000234807.5 TPM= 5.43 Transcript Type= NA chr1 59296708 59762724 59296708 59762724 + transcript4103.chr1.nic@FGGY transcript4103.chr1.nic protein_coding 59296708,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503 59296907,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762724 Gene ID= ENSG00000172456.17 TPM= 9.51 Transcript Type= NA chr1 59296991 59762730 59296991 59762730 + ENST00000303721.11@FGGY ENST00000303721.11 protein_coding 59296991,59321536,59339958,59346247,59378749,59456961,59512311,59554124,59607803,59625988,59638228,59660219,59667283,59674039,59757931,59762503 59297150,59321750,59340069,59346398,59378837,59457076,59512439,59554227,59607910,59626049,59638375,59660293,59667403,59674133,59757992,59762730 Gene ID= ENSG00000172456.17 TPM= 14.04 Transcript Type= protein_coding chr1 59814861 59876378 59814861 59876378 + ENST00000371208.3@HOOK1 ENST00000371208.3 protein_coding 59814861,59821858,59828780,59832163,59833405,59835345,59836873,59840308,59843432,59847045,59848315,59849073,59858428,59858985,59860188,59862784,59864632,59865163,59865872,59868250,59871042,59872795 59815180,59821943,59828852,59832213,59833537,59835412,59836935,59840391,59843598,59847185,59848516,59849183,59858515,59859045,59860328,59862877,59864666,59865245,59865972,59868351,59871110,59876378 Gene ID= ENSG00000134709.10 TPM= 7.24 Transcript Type= protein_coding chr1 61082384 61458186 61082384 61458186 + transcript4122.chr1.nnic@NFIA transcript4122.chr1.nnic protein_coding 61082384,61088149,61277520,61332512,61352450,61359147,61383237,61404104,61406562,61426465,61455303 61082818,61088680,61277585,61332586,61352567,61359274,61383365,61404267,61406727,61426556,61458186 Gene ID= ENSG00000162599.15 TPM= 15.39 Transcript Type= NA chr1 61681045 61725478 61681045 61725478 - transcript4127.chr1.nic@TM2D1 transcript4127.chr1.nic protein_coding 61724957,61723713,61709329,61700934,61694697,61686792,61683417,61681045 61725478,61723786,61709437,61701025,61694770,61686921,61683546,61681350 Gene ID= ENSG00000162604.12 TPM= 17.21 Transcript Type= NA chr1 61681045 61725138 61681045 61725138 - transcript4128.chr1.nnic@TM2D1 transcript4128.chr1.nnic protein_coding 61724957,61723713,61709329,61700934,61686792,61683417,61681045 61725138,61723786,61709437,61701025,61686921,61683546,61681350 Gene ID= ENSG00000162604.12 TPM= 2.72 Transcript Type= NA chr1 62436304 62451802 62436304 62451802 + ENST00000371146.5@USP1 ENST00000371146.5 protein_coding 62436304,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246 62436562,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451802 Gene ID= ENSG00000162607.12 TPM= 4.83 Transcript Type= protein_coding chr1 62436356 62451737 62436356 62451737 + transcript4141.chr1.nic@USP1 transcript4141.chr1.nic protein_coding 62436356,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246 62436467,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451737 Gene ID= ENSG00000162607.12 TPM= 2.11 Transcript Type= NA chr1 62436655 62451804 62436655 62451804 + ENST00000339950.4@USP1 ENST00000339950.4 protein_coding 62436655,62439799,62441488,62442195,62443159,62444738,62447341,62448465,62450246 62437400,62440037,62441608,62442299,62443319,62445429,62447511,62448666,62451804 Gene ID= ENSG00000162607.12 TPM= 24.75 Transcript Type= protein_coding chr1 62784135 62865513 62784135 62865513 + ENST00000317868.8@ATG4C ENST00000317868.8 protein_coding 62784135,62803719,62805172,62816575,62819005,62821139,62829040,62834038,62834776,62841428,62863992 62784273,62803862,62805255,62816808,62819335,62821209,62829176,62834116,62834852,62841547,62865513 Gene ID= ENSG00000125703.14 TPM= 9.96 Transcript Type= protein_coding chr1 63440775 63523254 63440775 63523254 - transcript4167.chr1.nnic@ITGB3BP transcript4167.chr1.nnic protein_coding 63523129,63508528,63490083,63478764,63454890,63454380,63453918,63447565,63446806,63440775 63523254,63508570,63490218,63478833,63454968,63454473,63453974,63447609,63446856,63441103 Gene ID= ENSG00000142856.16 TPM= 1.81 Transcript Type= NA chr1 63440771 63593772 63440771 63593772 - transcript4170.chr1.nnic@ITGB3BP transcript4170.chr1.nnic protein_coding 63593525,63529131,63508528,63490083,63478764,63454890,63454380,63453918,63446806,63440771 63593772,63529186,63508570,63490218,63478833,63454968,63454473,63453974,63446856,63441103 Gene ID= ENSG00000142856.16 TPM= 2.72 Transcript Type= NA chr1 63440771 63523254 63440771 63523254 - transcript4174.chr1.nic@ITGB3BP transcript4174.chr1.nic protein_coding 63523129,63508528,63454890,63454380,63453918,63446806,63440771 63523254,63508570,63454968,63454473,63453974,63446856,63441103 Gene ID= ENSG00000142856.16 TPM= 2.72 Transcript Type= NA chr1 63452652 63523254 63452652 63523254 - transcript4175.chr1.nic@ITGB3BP transcript4175.chr1.nic protein_coding 63523129,63508528,63490083,63478764,63454890,63454380,63452652 63523254,63508570,63490218,63478833,63454968,63454473,63453974 Gene ID= ENSG00000142856.16 TPM= 1.81 Transcript Type= NA chr1 63440773 63523215 63440773 63523215 - ENST00000271002.14@ITGB3BP ENST00000271002.14 protein_coding 63523129,63508528,63490083,63478764,63454890,63454380,63453918,63446806,63440773 63523215,63508570,63490218,63478833,63454968,63454473,63453974,63446856,63441103 Gene ID= ENSG00000142856.16 TPM= 10.87 Transcript Type= protein_coding chr1 63523390 63572693 63523390 63572693 + ENST00000371088.4@EFCAB7 ENST00000371088.4 protein_coding 63523390,63525572,63531820,63532670,63533454,63534095,63545916,63551725,63555358,63557114,63561709,63568310,63571021,63572442 63523634,63525759,63532031,63532756,63533649,63534216,63546057,63551834,63555515,63557247,63561857,63568519,63571128,63572693 Gene ID= ENSG00000203965.12 TPM= 7.24 Transcript Type= protein_coding chr1 63593276 63660245 63593276 63660245 + ENST00000371084.7@PGM1 ENST00000371084.7 protein_coding 63593276,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586 63593734,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660245 Gene ID= ENSG00000079739.15 TPM= 357.24 Transcript Type= protein_coding chr1 63593809 63660241 63593809 63660241 + ENST00000540265.5@PGM1 ENST00000540265.5 protein_coding 63593809,63629425,63629942,63631657,63634829,63636234,63638685,63648517,63651669,63654332,63659586 63594144,63629587,63630088,63631782,63635019,63636388,63638800,63648652,63651852,63654466,63660241 Gene ID= ENSG00000079739.15 TPM= 5.89 Transcript Type= protein_coding chr1 64470125 64693055 64470125 64693055 + transcript4182.chr1.nic@CACHD1 transcript4182.chr1.nic protein_coding 64470125,64550594,64582156,64602806,64629355,64634044,64641820,64647801,64652161,64653758,64654686,64658705,64663695,64664498,64666057,64671564,64673158,64673348,64675401,64675897,64676895,64678159,64679595,64681258,64682005,64691323 64470942,64550656,64582304,64602912,64629481,64634260,64641969,64648034,64652310,64653881,64654803,64658873,64663837,64664679,64666167,64671686,64673257,64673464,64675561,64675983,64677011,64678310,64679756,64681335,64682106,64693055 Gene ID= ENSG00000158966.13 TPM= 10.41 Transcript Type= NA chr1 64470125 64676441 64470125 64676441 + transcript4185.chr1.nic@CACHD1 transcript4185.chr1.nic protein_coding 64470125,64550594,64582156,64602806,64629355,64632599,64634044,64641820,64647801,64652161,64653758,64654686,64658705,64663695,64664498,64666057,64671564,64673158,64673348,64675401,64675897 64470942,64550656,64582304,64602912,64629481,64632743,64634260,64641969,64648034,64652310,64653881,64654803,64658873,64663837,64664679,64666167,64671686,64673257,64673464,64675561,64676441 Gene ID= ENSG00000158966.13 TPM= 4.98 Transcript Type= NA chr1 64745095 64833232 64745095 64833232 + ENST00000371072.8@RAVER2 ENST00000371072.8 protein_coding 64745095,64768656,64777623,64781380,64789388,64802976,64804773,64804991,64807206,64812738,64814704,64830839 64745421,64768722,64778092,64781571,64789514,64803061,64804838,64805105,64807474,64812849,64814840,64833232 Gene ID= ENSG00000162437.14 TPM= 13.58 Transcript Type= protein_coding chr1 64833229 64966504 64833229 64966504 - ENST00000342505.4@JAK1 ENST00000342505.4 protein_coding 64966333,64886259,64883277,64879025,64873370,64869311,64866866,64864787,64860105,64857656,64855509,64850804,64847532,64846649,64845513,64844754,64844064,64841451,64841245,64839603,64838465,64837932,64836098,64835396,64833229 64966504,64886341,64883475,64879148,64873523,64869474,64867208,64864972,64860262,64857779,64855698,64850910,64847675,64846736,64845640,64844889,64844215,64841601,64841339,64839795,64838589,64838104,64836215,64835506,64834657 Gene ID= ENSG00000162434.11 TPM= 156.66 Transcript Type= protein_coding chr1 65147549 65232145 65147549 65232145 + ENST00000545314.5@AK4 ENST00000545314.5 protein_coding 65147549,65148278,65190710,65218754,65224752,65226063 65147665,65148552,65190829,65218926,65224870,65232145 Gene ID= ENSG00000162433.14 TPM= 3.62 Transcript Type= protein_coding chr1 65254428 65415269 65254428 65415269 + transcript4205.chr1.nic@DNAJC6 transcript4205.chr1.nic protein_coding 65254428,65364635,65365885,65366048,65379402,65384193,65385712,65386812,65388336,65389256,65389547,65392431,65394898,65398813,65401761,65405870,65408641,65411250,65412924 65254649,65364785,65365934,65366196,65379524,65384326,65385906,65386929,65388415,65389449,65389627,65392865,65395032,65398881,65401880,65406133,65408783,65411426,65415269 Gene ID= ENSG00000116675.15 TPM= 5.43 Transcript Type= NA chr1 65420587 65436007 65420587 65436007 + ENST00000371065.8@LEPROT ENST00000371065.8 protein_coding 65420587,65425303,65429862,65431803 65420740,65425378,65430048,65436007 Gene ID= ENSG00000213625.8 TPM= 194.69 Transcript Type= protein_coding chr1 65420668 65428009 65420668 65428009 + ENST00000497874.5@LEPROT ENST00000497874.5 protein_coding 65420668,65425303,65427782 65420740,65425378,65428009 Gene ID= ENSG00000213625.8 TPM= 4.53 Transcript Type= processed_transcript chr1 65420652 65630422 65420652 65630422 + ENST00000371059.7@LEPR ENST00000371059.7 protein_coding 65420652,65425303,65565546,65570473,65572326,65592657,65596448,65598660,65601392,65601843,65605038,65608753,65609947,65610214,65616008,65617964,65619928,65621353,65622906,65630202 65420740,65425378,65565605,65570802,65572449,65592865,65596593,65598804,65601682,65601960,65605237,65608901,65610106,65610296,65616224,65618146,65620023,65621458,65622981,65630422 Gene ID= ENSG00000116678.19 TPM= 1.81 Transcript Type= protein_coding chr1 65420652 65635428 65420652 65635428 + ENST00000371060.7@LEPR ENST00000371060.7 protein_coding 65420652,65425303,65565546,65570473,65572326,65592657,65596448,65598660,65601392,65601843,65605038,65608753,65609947,65610214,65616008,65617964,65619928,65621353,65622906,65633152 65420740,65425378,65565605,65570802,65572449,65592865,65596593,65598804,65601682,65601960,65605237,65608901,65610106,65610296,65616224,65618146,65620023,65621458,65622981,65635428 Gene ID= ENSG00000116678.19 TPM= 5.43 Transcript Type= protein_coding chr1 66812891 66924909 66812891 66924909 - transcript4220.chr1.nic@WDR78 transcript4220.chr1.nic protein_coding 66924662,66905201,66893229,66891154,66874781,66871370,66862147,66847484,66840469,66837710,66835626,66833991,66833585,66826820,66822361,66812891 66924909,66905375,66893413,66891266,66874937,66871509,66862302,66847678,66840671,66837796,66835777,66834148,66833706,66827046,66822517,66814180 Gene ID= ENSG00000152763.16 TPM= 1.81 Transcript Type= NA chr1 66812885 66924887 66812885 66924887 - ENST00000371026.7@WDR78 ENST00000371026.7 protein_coding 66924662,66905201,66893229,66891154,66874781,66871370,66862147,66847484,66840469,66837710,66835626,66833991,66833585,66827812,66826820,66822361,66812885 66924887,66905375,66893413,66891266,66874937,66871509,66862302,66847678,66840671,66837796,66835777,66834148,66833706,66827910,66827046,66822517,66814180 Gene ID= ENSG00000152763.16 TPM= 1.81 Transcript Type= protein_coding chr1 66930243 66988030 66930243 66988030 + ENST00000355356.3@MIER1 ENST00000355356.3 protein_coding 66930243,66940028,66946150,66958059,66958851,66959679,66963088,66970808,66971655,66972897,66976595,66981779,66984572 66930400,66940052,66946295,66958220,66958983,66959743,66963160,66970959,66971736,66972991,66976722,66981918,66988030 Gene ID= ENSG00000198160.14 TPM= 58.86 Transcript Type= protein_coding chr1 67411038 67430386 67411038 67430386 - ENST00000370995.6@SERBP1 ENST00000370995.6 protein_coding 67429988,67426135,67425083,67424888,67424200,67420009,67415166,67411038 67430386,67426285,67425223,67424977,67424322,67420186,67415339,67413263 Gene ID= ENSG00000142864.14 TPM= 53.43 Transcript Type= protein_coding chr1 67412867 67430372 67412867 67430372 - ENST00000370990.5@SERBP1 ENST00000370990.5 protein_coding 67429988,67426135,67425083,67424888,67424200,67420009,67415166,67412867 67430372,67426285,67425223,67424959,67424322,67420186,67415339,67413263 Gene ID= ENSG00000142864.14 TPM= 6.34 Transcript Type= protein_coding chr1 67685061 67688338 67685061 67688338 + ENST00000370986.8@GADD45A ENST00000370986.8 protein_coding 67685061,67686025,67686350,67687661 67685538,67686126,67686587,67688338 Gene ID= ENSG00000116717.11 TPM= 19.02 Transcript Type= protein_coding chr1 67701463 67832269 67701463 67832269 - transcript4249.chr1.nnic@GNG12 transcript4249.chr1.nnic protein_coding 67831819,67777458,67707594,67701463 67832269,67777507,67707712,67705576 Gene ID= ENSG00000172380.5 TPM= 5.43 Transcript Type= NA chr1 67701466 67833467 67701466 67833467 - ENST00000370982.3@GNG12 ENST00000370982.3 protein_coding 67833344,67777458,67707594,67701466 67833467,67777507,67707712,67705576 Gene ID= ENSG00000172380.5 TPM= 132.21 Transcript Type= protein_coding chr1 68097786 68232577 68097786 68232577 - transcript4252.chr1.nic@WLS transcript4252.chr1.nic protein_coding 68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68097786 68232577,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68098753 Gene ID= ENSG00000116729.13 TPM= 14.49 Transcript Type= NA chr1 68142704 68232577 68142704 68232577 - transcript4256.chr1.nic@WLS transcript4256.chr1.nic protein_coding 68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68142704 68232577,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68142862 Gene ID= ENSG00000116729.13 TPM= 2.72 Transcript Type= NA chr1 68098473 68232545 68098473 68232545 - ENST00000354777.6@WLS ENST00000354777.6 protein_coding 68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68098473 68232545,68194221,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68098753 Gene ID= ENSG00000116729.13 TPM= 14.49 Transcript Type= protein_coding chr1 68125358 68232553 68125358 68232553 - ENST00000262348.8@WLS ENST00000262348.8 protein_coding 68232194,68193955,68159123,68155099,68153517,68150188,68148563,68148136,68145869,68144569,68137780,68125358 68232553,68194227,68159247,68155260,68153653,68150356,68148660,68148199,68146012,68144652,68137933,68126335 Gene ID= ENSG00000116729.13 TPM= 54.33 Transcript Type= protein_coding chr1 70144801 70205550 70144801 70205550 - transcript4271.chr1.nnic@LRRC40 transcript4271.chr1.nnic protein_coding 70205390,70184785,70181086,70178851,70175810,70173622,70173465,70159330,70155689,70152433,70151128,70148487,70144801 70205550,70184914,70181209,70178993,70175982,70173709,70173510,70159438,70155796,70152543,70151205,70148672,70145905 Gene ID= ENSG00000066557.5 TPM= 1.81 Transcript Type= NA chr1 70148103 70158099 70148103 70158099 - transcript4283.chr1.nic@LRRC40 transcript4283.chr1.nic protein_coding 70155689,70152433,70151128,70148103 70158099,70152543,70151205,70148672 Gene ID= ENSG00000066557.5 TPM= 2.72 Transcript Type= NA chr1 70144805 70205620 70144805 70205620 - ENST00000370952.3@LRRC40 ENST00000370952.3 protein_coding 70205390,70189092,70187265,70184785,70181086,70178851,70175810,70173622,70173465,70159330,70155689,70152433,70151128,70148487,70144805 70205620,70189273,70187338,70184914,70181209,70178993,70175982,70173709,70173510,70159438,70155796,70152543,70151205,70148672,70145905 Gene ID= ENSG00000066557.5 TPM= 33.51 Transcript Type= protein_coding chr1 70221354 70253763 70221354 70253763 + transcript4280.chr1.nic@SRSF11 transcript4280.chr1.nic protein_coding 70221354,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250611 70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70253763 Gene ID= ENSG00000116754.13 TPM= 25.81 Transcript Type= NA chr1 70205724 70253052 70205724 70253052 + ENST00000370950.7@SRSF11 ENST00000370950.7 protein_coding 70205724,70221612,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250608 70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70253052 Gene ID= ENSG00000116754.13 TPM= 43.69 Transcript Type= protein_coding chr1 70205682 70251617 70205682 70251617 + ENST00000370951.5@SRSF11 ENST00000370951.5 protein_coding 70205682,70221615,70228422,70232268,70234696,70235501,70237425,70239439,70244684,70246818,70249952,70250365,70250611 70205780,70221839,70228555,70232377,70234788,70235550,70237552,70239520,70244815,70246907,70250047,70250503,70251617 Gene ID= ENSG00000116754.13 TPM= 3.62 Transcript Type= protein_coding chr1 70260594 70354725 70260594 70354725 - transcript4285.chr1.nnic@ANKRD13C transcript4285.chr1.nnic protein_coding 70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70260594 70354725,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70262847 Gene ID= ENSG00000118454.12 TPM= 1.81 Transcript Type= NA chr1 70260588 70354722 70260588 70354722 - ENST00000370944.8@ANKRD13C ENST00000370944.8 protein_coding 70353979,70336058,70324853,70315481,70313745,70306224,70300764,70296130,70292388,70276765,70274720,70270856,70260588 70354722,70336099,70324957,70315566,70313790,70306290,70300908,70296261,70292549,70276844,70274818,70270956,70262847 Gene ID= ENSG00000118454.12 TPM= 9.96 Transcript Type= protein_coding chr1 70354791 70368020 70354791 70368020 + transcript4289.chr1.nic@HHLA3 transcript4289.chr1.nic protein_coding 70354791,70366444,70366933,70367617 70355111,70366537,70366984,70368020 Gene ID= ENSG00000197568.13 TPM= 1.81 Transcript Type= NA chr1 70354836 70368021 70354836 70368021 + ENST00000370940.5@HHLA3 ENST00000370940.5 protein_coding 70354836,70366444,70367617 70355111,70366537,70368021 Gene ID= ENSG00000197568.13 TPM= 5.43 Transcript Type= protein_coding chr1 70354829 70368023 70354829 70368023 + ENST00000463058.5@HHLA3 ENST00000463058.5 protein_coding 70354829,70366444,70366933,70367617 70355107,70366537,70366984,70368023 Gene ID= ENSG00000197568.13 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr1 70970781 71047788 70970781 71047788 - ENST00000306666.9@PTGER3 ENST00000306666.9 protein_coding 71046681,71012305,70974297,70970781 71047788,71012484,70974388,70971733 Gene ID= ENSG00000050628.20 TPM= 12.68 Transcript Type= protein_coding chr1 71063291 71081297 71063291 71081297 - ENST00000370920.7@ZRANB2 ENST00000370920.7 protein_coding 71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71063291 71081297,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065137 Gene ID= ENSG00000132485.13 TPM= 26.26 Transcript Type= protein_coding chr1 71063291 71081263 71063291 71081263 - transcript4302.chr1.nic@ZRANB2 transcript4302.chr1.nic protein_coding 71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71065678,71063291 71081263,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065137 Gene ID= ENSG00000132485.13 TPM= 4.98 Transcript Type= NA chr1 71063300 71081263 71063300 71081263 - transcript4305.chr1.nic@ZRANB2 transcript4305.chr1.nic protein_coding 71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71063300 71081263,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934 Gene ID= ENSG00000132485.13 TPM= 3.32 Transcript Type= NA chr1 71063337 71081011 71063337 71081011 - ENST00000254821.10@ZRANB2 ENST00000254821.10 protein_coding 71080940,71078656,71078457,71076795,71072472,71072121,71070827,71069276,71066776,71065678,71063337 71081011,71078708,71078565,71076877,71072548,71072255,71070996,71069362,71066934,71065752,71065137 Gene ID= ENSG00000132485.13 TPM= 12.52 Transcript Type= protein_coding chr1 71402944 71935314 71402944 71935314 - transcript4307.chr1.nic@NEGR1 transcript4307.chr1.nic protein_coding 71935079,71776172,71698008,71611026,71592817,71402944 71935314,71776297,71698139,71611146,71592968,71407570 Gene ID= ENSG00000172260.14 TPM= 1.81 Transcript Type= NA chr1 74179316 74198152 74179316 74198152 - transcript4310.chr1.nic@LRRIQ3 transcript4310.chr1.nic protein_coding 74197996,74183436,74179316 74198152,74183684,74182861 Gene ID= ENSG00000162620.15 TPM= 2.72 Transcript Type= NA chr1 74198212 74207234 74198212 74207234 + ENST00000370898.7@FPGT ENST00000370898.7 protein_coding 74198212,74199664,74201318,74204391 74198360,74199831,74201410,74207234 Gene ID= ENSG00000254685.6 TPM= 19.92 Transcript Type= protein_coding chr1 74198216 74375846 74198216 74375846 + transcript4312.chr1.nic@FPGT-TNNI3K transcript4312.chr1.nic protein_coding 74198216,74199664,74201318,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391,74370288,74375565 74198360,74199831,74201410,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369585,74370392,74375846 Gene ID= ENSG00000259030.6 TPM= 1.81 Transcript Type= NA chr1 74198216 74369928 74198216 74369928 + transcript4313.chr1.nic@FPGT-TNNI3K transcript4313.chr1.nic protein_coding 74198216,74199664,74201318,74236102,74249459,74250672,74271598,74331450,74336011,74342842,74343075,74353266,74353980,74367256,74367908,74369022,74369207,74369391 74198360,74199831,74201410,74236210,74249544,74250769,74271708,74331548,74336149,74342986,74343179,74353360,74354129,74367342,74367964,74369114,74369264,74369928 Gene ID= ENSG00000259030.6 TPM= 1.81 Transcript Type= NA chr1 74198268 74207352 74198268 74207352 + transcript4319.chr1.nnic@FPGT-TNNI3K transcript4319.chr1.nnic protein_coding 74198268,74199664,74201318,74205219 74198360,74199831,74201410,74207352 Gene ID= ENSG00000259030.6 TPM= 1.81 Transcript Type= NA chr1 74705496 74733110 74705496 74733110 - transcript4323.chr1.nnic@CRYZ transcript4323.chr1.nnic protein_coding 74733071,74732956,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705496 74733110,74733047,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457 Gene ID= ENSG00000116791.13 TPM= 3.62 Transcript Type= NA chr1 74705486 74733030 74705486 74733030 - ENST00000340866.9@CRYZ ENST00000340866.9 protein_coding 74732956,74724711,74723118,74719209,74714579,74710098,74707103,74706899,74705486 74733030,74724834,74723270,74719372,74714630,74710247,74707204,74706994,74706457 Gene ID= ENSG00000116791.13 TPM= 41.66 Transcript Type= protein_coding chr1 74733156 74766674 74733156 74766674 + ENST00000370867.7@TYW3 ENST00000370867.7 protein_coding 74733156,74736542,74738690,74748751,74752292,74763894 74733418,74736622,74738788,74748822,74752425,74766674 Gene ID= ENSG00000162623.15 TPM= 19.92 Transcript Type= protein_coding chr1 74733152 74766674 74733152 74766674 + ENST00000457880.6@TYW3 ENST00000457880.6 protein_coding 74733152,74736542,74748751,74752292,74763894 74733418,74736622,74748822,74752425,74766674 Gene ID= ENSG00000162623.15 TPM= 1.81 Transcript Type= protein_coding chr1 75724351 75763679 75724351 75763679 + ENST00000370841.8@ACADM ENST00000370841.8 protein_coding 75724351,75728401,75732644,75732853,75733528,75734791,75739980,75745806,75749419,75750451,75761122,75762692 75724817,75728488,75732741,75732922,75733628,75734871,75740110,75745914,75749559,75750546,75761370,75763679 Gene ID= ENSG00000117054.13 TPM= 161.03 Transcript Type= protein_coding chr1 75786201 75795079 75786201 75795079 + ENST00000319942.7@RABGGTB ENST00000319942.7 protein_coding 75786201,75787497,75789159,75789952,75791285,75791461,75792181,75794084,75794510 75786274,75787604,75789356,75790057,75791337,75791571,75792306,75794233,75795079 Gene ID= ENSG00000137955.15 TPM= 62.48 Transcript Type= protein_coding chr1 76074719 76634601 76074719 76634601 + ENST00000328299.3@ST6GALNAC3 ENST00000328299.3 protein_coding 76074719,76313805,76412008,76627452,76628620 76074884,76313999,76412417,76627559,76634601 Gene ID= ENSG00000184005.10 TPM= 9.06 Transcript Type= protein_coding chr1 76867428 77045501 76867428 77045501 + transcript4348.chr1.nic@ST6GALNAC5 transcript4348.chr1.nic protein_coding 76867428,76868497,77044204 76867690,76868742,77045501 Gene ID= ENSG00000117069.14 TPM= 3.62 Transcript Type= NA chr1 76867480 77064058 76867480 77064058 + ENST00000318803.6@ST6GALNAC5 ENST00000318803.6 protein_coding 76867480,76868497,77044204,77050262,77062975 76867690,76868742,77044613,77050365,77064058 Gene ID= ENSG00000117069.14 TPM= 11.77 Transcript Type= nonsense_mediated_decay chr1 77190031 77219430 77190031 77219430 - transcript4353.chr1.nnic@PIGK transcript4353.chr1.nnic protein_coding 77219310,77210436,77206640,77190031 77219430,77210489,77206731,77190220 Gene ID= ENSG00000142892.14 TPM= 1.81 Transcript Type= NA chr1 77088990 77219426 77088990 77219426 - ENST00000370812.7@PIGK ENST00000370812.7 protein_coding 77219310,77210436,77206640,77169260,77166719,77163846,77161594,77161295,77154449,77122275,77088990 77219426,77210489,77206731,77169395,77166830,77163942,77161711,77161405,77154621,77122359,77092490 Gene ID= ENSG00000142892.14 TPM= 25.36 Transcript Type= protein_coding chr1 77564508 77683374 77564508 77683374 - transcript4358.chr1.nnic@ZZZ3 transcript4358.chr1.nnic protein_coding 77683262,77641522,77641384,77639449,77631835,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564508 77683374,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784 Gene ID= ENSG00000036549.12 TPM= 1.99 Transcript Type= NA chr1 77564504 77683443 77564504 77683443 - transcript4361.chr1.nnic@ZZZ3 transcript4361.chr1.nnic protein_coding 77683262,77641522,77641384,77639449,77633115,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564504 77683443,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784 Gene ID= ENSG00000036549.12 TPM= 4.71 Transcript Type= NA chr1 77564506 77682675 77564506 77682675 - transcript4368.chr1.nic@ZZZ3 transcript4368.chr1.nic protein_coding 77682585,77641522,77641384,77639449,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564506 77682675,77641655,77641446,77639602,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784 Gene ID= ENSG00000036549.12 TPM= 1.99 Transcript Type= NA chr1 77564500 77682658 77564500 77682658 - ENST00000370801.7@ZZZ3 ENST00000370801.7 protein_coding 77682585,77641522,77641384,77639449,77631850,77584517,77581979,77581776,77580998,77579527,77578774,77576068,77568332,77566081,77564500 77682658,77641655,77641446,77639602,77633405,77584655,77582126,77581891,77581069,77579628,77578869,77576220,77568466,77566181,77565784 Gene ID= ENSG00000036549.12 TPM= 13.76 Transcript Type= protein_coding chr1 77695990 77759838 77695990 77759838 - transcript4375.chr1.nic@USP33 transcript4375.chr1.nic protein_coding 77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695990 77759838,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474 Gene ID= ENSG00000077254.14 TPM= 3.12 Transcript Type= NA chr1 77695990 77759875 77695990 77759875 - transcript4377.chr1.nic@USP33 transcript4377.chr1.nic protein_coding 77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695990 77759875,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721901,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474 Gene ID= ENSG00000077254.14 TPM= 9.46 Transcript Type= NA chr1 77695990 77759875 77695990 77759875 - transcript4387.chr1.nic@USP33 transcript4387.chr1.nic protein_coding 77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77697863,77695990 77759875,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77697931,77697474 Gene ID= ENSG00000077254.14 TPM= 3.8 Transcript Type= NA chr1 77711649 77759784 77711649 77759784 - transcript4388.chr1.nic@USP33 transcript4388.chr1.nic protein_coding 77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711649 77759784,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855 Gene ID= ENSG00000077254.14 TPM= 1.81 Transcript Type= NA chr1 77711649 77759875 77711649 77759875 - transcript4392.chr1.nic@USP33 transcript4392.chr1.nic protein_coding 77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711649 77759875,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855 Gene ID= ENSG00000077254.14 TPM= 1.81 Transcript Type= NA chr1 77695991 77759852 77695991 77759852 - ENST00000370793.5@USP33 ENST00000370793.5 protein_coding 77759643,77745421,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695991 77759852,77745599,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474 Gene ID= ENSG00000077254.14 TPM= 10.37 Transcript Type= protein_coding chr1 77695987 77759852 77695987 77759852 - ENST00000370794.7@USP33 ENST00000370794.7 protein_coding 77759643,77741617,77741376,77740877,77739265,77736056,77734347,77730618,77729860,77728295,77725622,77723331,77722024,77721831,77721172,77718596,77717867,77715742,77714614,77713200,77711747,77701369,77697863,77695987 77759852,77741748,77741429,77740939,77739417,77736158,77734416,77730731,77729938,77728712,77725762,77723443,77722196,77721925,77721205,77718641,77718047,77715868,77714783,77713281,77711855,77701471,77697931,77697474 Gene ID= ENSG00000077254.14 TPM= 37.53 Transcript Type= protein_coding chr1 77779624 77879539 77779624 77879539 + ENST00000443751.3@MIGA1 ENST00000443751.3 protein_coding 77779624,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77873001,77874846 77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77873120,77879539 Gene ID= ENSG00000180488.14 TPM= 3.62 Transcript Type= protein_coding chr1 77779630 77868911 77779630 77868911 + transcript4395.chr1.nnic@MIGA1 transcript4395.chr1.nnic protein_coding 77779630,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77868248 77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77868911 Gene ID= ENSG00000180488.14 TPM= 4.53 Transcript Type= NA chr1 77779630 77874834 77779630 77874834 + transcript4396.chr1.nic@MIGA1 transcript4396.chr1.nic protein_coding 77779630,77783238,77801331,77803270,77806975,77813734,77815108,77843307,77858938,77859314,77860040,77861224,77863894,77866338,77873004 77779736,77783351,77801508,77803406,77807101,77813867,77815231,77843407,77859056,77859386,77860126,77861322,77864028,77866391,77874834 Gene ID= ENSG00000180488.14 TPM= 3.62 Transcript Type= NA chr1 77888506 77943891 77888506 77943891 + transcript4414.chr1.nnic@NEXN transcript4414.chr1.nnic protein_coding 77888506,77916055,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77942023,77942461 77888759,77916133,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77942208,77943891 Gene ID= ENSG00000162614.18 TPM= 3.85 Transcript Type= NA chr1 77888237 77943892 77888237 77943892 + transcript4415.chr1.nic@NEXN transcript4415.chr1.nic protein_coding 77888237,77916055,77917960,77918125,77926414,77926716,77929316,77933282,77935823,77942023,77942461 77888759,77916133,77918038,77918273,77926611,77926892,77929504,77933479,77936044,77942208,77943892 Gene ID= ENSG00000162614.18 TPM= 5.66 Transcript Type= NA chr1 77888506 77944160 77888506 77944160 + transcript4417.chr1.nnic@NEXN transcript4417.chr1.nnic protein_coding 77888506,77916055,77917960,77918125,77926414,77926716,77929316,77933282,77942023,77942461 77888759,77916133,77918038,77918273,77926611,77926892,77929504,77933479,77942208,77944160 Gene ID= ENSG00000162614.18 TPM= 2.94 Transcript Type= NA chr1 77888515 77943891 77888515 77943891 + ENST00000330010.12@NEXN ENST00000330010.12 protein_coding 77888515,77916055,77917960,77918125,77925188,77926414,77926716,77929316,77933282,77935823,77942023,77942461 77888759,77916133,77918038,77918273,77925229,77926611,77926892,77929504,77933479,77936044,77942208,77943891 Gene ID= ENSG00000162614.18 TPM= 21.05 Transcript Type= protein_coding chr1 77944056 77979076 77944056 77979076 - transcript4403.chr1.nic@FUBP1 transcript4403.chr1.nic protein_coding 77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77947453,77946530,77945506,77944056 77979076,77970015,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77947552,77946576,77945642,77944269 Gene ID= ENSG00000162613.16 TPM= 2.94 Transcript Type= NA chr1 77948270 77979086 77948270 77979086 - transcript4406.chr1.nic@FUBP1 transcript4406.chr1.nic protein_coding 77978885,77969925,77969022,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948270 77979086,77970015,77969084,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774 Gene ID= ENSG00000162613.16 TPM= 7.47 Transcript Type= NA chr1 77948138 77979503 77948138 77979503 - transcript4407.chr1.nnic@FUBP1 transcript4407.chr1.nnic protein_coding 77979397,77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948138 77979503,77979059,77970015,77968203,77967666,77967098,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774 Gene ID= ENSG00000162613.16 TPM= 9.28 Transcript Type= NA chr1 77948405 77979086 77948405 77979086 - ENST00000370768.6@FUBP1 ENST00000370768.6 protein_coding 77978885,77969925,77968165,77967627,77967049,77966884,77966694,77965069,77964870,77964646,77964254,77964062,77963574,77962770,77960344,77960184,77956572,77955255,77949155,77948405 77979086,77970015,77968203,77967666,77967101,77966955,77966751,77965231,77964968,77964747,77964356,77964162,77963715,77962930,77960495,77960263,77956700,77955329,77949300,77948774 Gene ID= ENSG00000162613.16 TPM= 85.35 Transcript Type= protein_coding chr1 78004854 78017964 78004854 78017964 + ENST00000370763.5@DNAJB4 ENST00000370763.5 protein_coding 78004854,78013051,78016014 78005321,78013619,78017964 Gene ID= ENSG00000162616.8 TPM= 186.54 Transcript Type= protein_coding chr1 78044805 78137241 78044805 78137241 + transcript4427.chr1.nnic@GIPC2 transcript4427.chr1.nnic protein_coding 78044805,78045604,78080675,78094952,78119393,78125881,78135592 78044939,78046334,78080860,78095132,78119499,78125962,78137241 Gene ID= ENSG00000137960.5 TPM= 2.72 Transcript Type= NA chr1 78045902 78138449 78045902 78138449 + ENST00000370759.3@GIPC2 ENST00000370759.3 protein_coding 78045902,78080675,78094952,78119393,78125881,78135592 78046334,78080860,78095132,78119499,78125962,78138449 Gene ID= ENSG00000137960.5 TPM= 81.5 Transcript Type= protein_coding chr1 78491072 78539749 78491072 78539749 + ENST00000370757.7@PTGFR ENST00000370757.7 protein_coding 78491072,78492672,78536406 78491236,78493541,78539749 Gene ID= ENSG00000122420.9 TPM= 2.72 Transcript Type= protein_coding chr1 78620403 78646145 78620403 78646145 + ENST00000370751.9@IFI44L ENST00000370751.9 protein_coding 78620403,78627906,78628951,78629720,78635337,78637032,78641021,78641435,78641775 78620571,78628393,78628999,78629915,78635489,78637203,78641121,78641609,78646145 Gene ID= ENSG00000137959.15 TPM= 3.62 Transcript Type= protein_coding chr1 78620431 78642796 78620431 78642796 + transcript4433.chr1.nic@IFI44L transcript4433.chr1.nic protein_coding 78620431,78628951,78629720,78635337,78637032,78641021,78641435,78641775 78620571,78628999,78629915,78635489,78637203,78641121,78641609,78642796 Gene ID= ENSG00000137959.15 TPM= 3.62 Transcript Type= NA chr1 78649833 78664078 78649833 78664078 + ENST00000495254.5@IFI44 ENST00000495254.5 protein_coding 78649833,78654243,78655014,78655362,78659312,78662704,78663765 78649905,78654279,78655209,78655511,78659483,78662878,78664078 Gene ID= ENSG00000137965.10 TPM= 1.81 Transcript Type= processed_transcript chr1 78649831 78664078 78649831 78664078 + ENST00000370747.8@IFI44 ENST00000370747.8 protein_coding 78649831,78650186,78654243,78655014,78655362,78659312,78660554,78662704,78663765 78649905,78650652,78654279,78655209,78655511,78659483,78660654,78662878,78664078 Gene ID= ENSG00000137965.10 TPM= 9.06 Transcript Type= protein_coding chr1 78889764 79006718 78889764 79006718 - ENST00000370742.3@ADGRL4 ENST00000370742.3 protein_coding 79006633,79005070,78946274,78939188,78938100,78937807,78936295,78926886,78921613,78920183,78917830,78917634,78893098,78891524,78889764 79006718,79005219,78946426,78939258,78938279,78937990,78936411,78927091,78921786,78920386,78918050,78917700,78893189,78891692,78891216 Gene ID= ENSG00000162618.13 TPM= 24.45 Transcript Type= protein_coding chr1 81306316 81992422 81306316 81992422 + transcript4446.chr1.nnic@ADGRL2 transcript4446.chr1.nnic protein_coding 81306316,81326720,81445021,81580876,81761811,81836885,81907017,81936728,81942969,81950189,81951018,81951957,81955877,81966058,81966404,81968026,81969178,81970314,81971852,81979869,81981808,81984583,81985259,81990391 81306509,81326775,81445089,81580980,81761852,81837057,81907230,81936837,81943769,81950482,81951121,81952142,81956060,81966183,81966609,81968199,81969387,81970534,81971918,81979960,81981976,81984711,81985355,81992422 Gene ID= ENSG00000117114.19 TPM= 3.02 Transcript Type= NA chr1 81800934 81992737 81800934 81992737 + transcript4450.chr1.nnic@ADGRL2 transcript4450.chr1.nnic protein_coding 81800934,81836885,81907017,81936728,81942969,81950189,81951018,81951957,81955877,81966058,81966404,81968026,81969178,81970314,81971852,81979869,81981808,81984583,81985259,81990391 81801068,81837057,81907230,81936837,81943769,81950482,81951121,81952142,81956060,81966183,81966609,81968199,81969387,81970534,81971918,81979960,81981976,81984711,81985355,81992737 Gene ID= ENSG00000117114.19 TPM= 5.73 Transcript Type= NA chr1 81801442 81992422 81801442 81992422 + transcript4451.chr1.nnic@ADGRL2 transcript4451.chr1.nnic protein_coding 81801442,81836885,81907017,81936728,81942969,81950189,81951018,81951957,81955877,81966058,81966404,81968026,81969178,81970314,81971852,81979869,81981808,81984583,81985259,81990391 81802229,81837057,81907230,81936837,81943769,81950482,81951121,81952142,81956060,81966183,81966609,81968199,81969387,81970534,81971918,81979960,81981976,81984711,81985355,81992422 Gene ID= ENSG00000117114.19 TPM= 4.83 Transcript Type= NA chr1 84078062 84238498 84078062 84238498 + ENST00000370689.6@PRKACB ENST00000370689.6 protein_coding 84078062,84179177,84182200,84184037,84185100,84196616,84197729,84202683,84214153,84235180 84078371,84179238,84182328,84184135,84185182,84196742,84197824,84202805,84214317,84238498 Gene ID= ENSG00000142875.19 TPM= 6.34 Transcript Type= protein_coding chr1 84144271 84238498 84144271 84238498 + ENST00000370685.7@PRKACB ENST00000370685.7 protein_coding 84144271,84179177,84182200,84184037,84185100,84196616,84197729,84202683,84214153,84235180 84144548,84179238,84182328,84184135,84185182,84196742,84197824,84202805,84214317,84238498 Gene ID= ENSG00000142875.19 TPM= 3.62 Transcript Type= protein_coding chr1 84298366 84350798 84298366 84350798 + ENST00000370673.7@SAMD13 ENST00000370673.7 protein_coding 84298366,84303203,84325637,84349631 84298567,84303287,84325748,84350798 Gene ID= ENSG00000203943.8 TPM= 1.36 Transcript Type= protein_coding chr1 84298365 84350797 84298365 84350797 + transcript4461.chr1.nnic@SAMD13 transcript4461.chr1.nnic protein_coding 84298365,84325637,84349631 84298567,84325748,84350797 Gene ID= ENSG00000203943.8 TPM= 3.17 Transcript Type= NA chr1 84479267 84497790 84479267 84497790 + ENST00000370654.5@RPF1 ENST00000370654.5 protein_coding 84479267,84480956,84482915,84489633,84490319,84495373,84495882,84496244,84497429 84479509,84481012,84482995,84489728,84490472,84495455,84496063,84496370,84497790 Gene ID= ENSG00000117133.10 TPM= 17.21 Transcript Type= protein_coding chr1 84498286 84574485 84498286 84574485 - transcript4466.chr1.nnic@CTBS transcript4466.chr1.nnic protein_coding 84574239,84570582,84569931,84565841,84563735,84563257,84501826,84498286 84574485,84570720,84570139,84566012,84563832,84563418,84501970,84498548 Gene ID= ENSG00000117151.12 TPM= 7.24 Transcript Type= NA chr1 84553123 84574422 84553123 84574422 - transcript4471.chr1.nnic@CTBS transcript4471.chr1.nnic protein_coding 84574239,84570582,84569931,84565841,84563735,84563245,84553123 84574422,84570720,84570139,84566012,84563832,84563418,84555199 Gene ID= ENSG00000117151.12 TPM= 3.62 Transcript Type= NA chr1 84553121 84574480 84553121 84574480 - ENST00000477677.5@CTBS ENST00000477677.5 protein_coding 84574239,84570582,84565841,84563735,84563257,84553121 84574480,84570720,84566012,84563832,84563418,84555199 Gene ID= ENSG00000117151.12 TPM= 10.41 Transcript Type= processed_transcript chr1 84554538 84574430 84554538 84574430 - ENST00000465118.6@CTBS ENST00000465118.6 protein_coding 84573916,84570582,84565841,84563735,84563257,84554538 84574430,84570720,84566012,84563832,84563418,84555199 Gene ID= ENSG00000117151.12 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr1 84498325 84506565 84498325 84506565 - ENST00000370645.8@GNG5 ENST00000370645.8 protein_coding 84506436,84506011,84501826,84498325 84506565,84506301,84501970,84498548 Gene ID= ENSG00000174021.10 TPM= 97.8 Transcript Type= protein_coding chr1 84498329 84506565 84498329 84506565 - ENST00000370641.3@GNG5 ENST00000370641.3 protein_coding 84506011,84501826,84498329 84506565,84501970,84498548 Gene ID= ENSG00000174021.10 TPM= 26.26 Transcript Type= protein_coding chr1 84574580 84583618 84574580 84583618 . transcript4479.chr1.nnic@NA transcript4479.chr1.nnic NA 84574580,84578019,84582940 84574760,84578135,84583618 Gene ID= novel_gene_chr1_4480 TPM= 1.81 Transcript Type= NA chr1 84643707 84690545 84643707 84690545 - ENST00000342203.7@SSX2IP ENST00000342203.7 protein_coding 84690371,84671177,84670646,84669681,84666122,84664417,84662455,84662198,84658318,84656348,84655832,84651883,84650362,84643707 84690545,84671308,84670815,84669893,84666232,84664552,84662530,84662375,84658468,84656484,84656005,84651997,84650527,84647607 Gene ID= ENSG00000117155.16 TPM= 1.81 Transcript Type= protein_coding chr1 84925582 84997113 84925582 84997113 - transcript4486.chr1.nic@MCOLN2 transcript4486.chr1.nic protein_coding 84996796,84971936,84965549,84958529,84956431,84952446,84952243,84947033,84940879,84939553,84937981,84937755,84931362,84929558,84925582 84997113,84972034,84965708,84958702,84956584,84952530,84952339,84947132,84940991,84939702,84938082,84937877,84931568,84929679,84926721 Gene ID= ENSG00000153898.12 TPM= 1.81 Transcript Type= NA chr1 84925582 84997160 84925582 84997160 - transcript4489.chr1.nnic@MCOLN2 transcript4489.chr1.nnic protein_coding 84996796,84965549,84958529,84952446,84952243,84947033,84940879,84939553,84937981,84937755,84931362,84929558,84925582 84997160,84965708,84958702,84952530,84952339,84947132,84940991,84939702,84938082,84937877,84931568,84929679,84926721 Gene ID= ENSG00000153898.12 TPM= 1.81 Transcript Type= NA chr1 85048580 85052033 85048580 85052033 + transcript4512.chr1.nnic@WDR63 transcript4512.chr1.nnic protein_coding 85048580,85049385,85051102 85048855,85049438,85052033 Gene ID= ENSG00000162643.12 TPM= 1.81 Transcript Type= NA chr1 85062321 85133137 85062321 85133137 + ENST00000294664.10@WDR63 ENST00000294664.10 protein_coding 85062321,85071928,85073054,85081234,85082300,85084546,85085831,85090116,85093458,85094431,85095931,85097569,85098530,85104524,85108033,85110048,85117729,85121751,85124121,85126511,85128708,85129990,85132855 85062486,85072005,85073092,85081415,85082404,85084695,85086030,85090232,85093648,85094555,85096020,85097655,85098658,85104597,85108177,85110135,85117859,85121814,85124251,85126715,85128799,85130112,85133137 Gene ID= ENSG00000162643.12 TPM= 12.68 Transcript Type= protein_coding chr1 85018073 85048889 85018073 85048889 - transcript4499.chr1.nic@MCOLN3 transcript4499.chr1.nic protein_coding 85048396,85047310,85045133,85041010,85034098,85032872,85032696,85029106,85026172,85025939,85022299,85022070,85021070,85018073 85048889,85047609,85045362,85041177,85034251,85032956,85032792,85029205,85026284,85026088,85022400,85022192,85021276,85019257 Gene ID= ENSG00000055732.12 TPM= 6.34 Transcript Type= NA chr1 85018073 85048667 85018073 85048667 - transcript4501.chr1.nic@MCOLN3 transcript4501.chr1.nic protein_coding 85048396,85047575,85045133,85041010,85034098,85032872,85032696,85029106,85026172,85025939,85022299,85022070,85021070,85018073 85048667,85047609,85045362,85041177,85034251,85032956,85032792,85029205,85026284,85026088,85022400,85022192,85021276,85019257 Gene ID= ENSG00000055732.12 TPM= 14.49 Transcript Type= NA chr1 85018073 85048173 85018073 85048173 - transcript4504.chr1.nic@MCOLN3 transcript4504.chr1.nic protein_coding 85047575,85045133,85041010,85034098,85032872,85032696,85029106,85026172,85025939,85022299,85022070,85021070,85018073 85048173,85045362,85041177,85034251,85032956,85032792,85029205,85026284,85026088,85022400,85022192,85021276,85019257 Gene ID= ENSG00000055732.12 TPM= 7.24 Transcript Type= NA chr1 85018082 85048446 85018082 85048446 - ENST00000370589.6@MCOLN3 ENST00000370589.6 protein_coding 85048396,85045133,85041010,85034098,85032872,85032696,85029106,85026172,85025939,85022299,85022070,85021070,85018082 85048446,85045362,85041177,85034251,85032956,85032792,85029205,85026284,85026088,85022400,85022192,85021276,85019257 Gene ID= ENSG00000055732.12 TPM= 30.79 Transcript Type= protein_coding chr1 85249953 85259672 85249953 85259672 - ENST00000294661.8@C1orf52 ENST00000294661.8 protein_coding 85259358,85258935,85258524,85249953 85259672,85259061,85258722,85252702 Gene ID= ENSG00000162642.13 TPM= 14.49 Transcript Type= processed_transcript chr1 85251968 85259642 85251968 85259642 - ENST00000471115.5@C1orf52 ENST00000471115.5 protein_coding 85259358,85258524,85251968 85259642,85258722,85252702 Gene ID= ENSG00000162642.13 TPM= 2.72 Transcript Type= protein_coding chr1 85266249 85276631 85266249 85276631 - transcript4517.chr1.nnic@BCL10 transcript4517.chr1.nnic protein_coding 85276296,85270618,85267092,85266249 85276631,85270906,85267982,85266844 Gene ID= ENSG00000142867.12 TPM= 3.17 Transcript Type= NA chr1 85266248 85277090 85266248 85277090 - ENST00000370580.5@BCL10 ENST00000370580.5 protein_coding 85276296,85270618,85266248 85277090,85270906,85267982 Gene ID= ENSG00000142867.12 TPM= 20.37 Transcript Type= protein_coding chr1 85318486 85578363 85318486 85578363 - ENST00000426972.7@DDAH1 ENST00000426972.7 protein_coding 85577984,85496166,85358748,85351506,85350415,85324740,85318486 85578363,85496281,85358847,85351579,85350534,85324883,85321568 Gene ID= ENSG00000153904.18 TPM= 20.37 Transcript Type= protein_coding chr1 85318485 85465140 85318485 85465140 - ENST00000284031.12@DDAH1 ENST00000284031.12 protein_coding 85464743,85358748,85351506,85350415,85324740,85318485 85465140,85358847,85351579,85350534,85324883,85321568 Gene ID= ENSG00000153904.18 TPM= 59.31 Transcript Type= protein_coding chr1 85580761 85583962 85580761 85583962 + ENST00000451137.6@CYR61 ENST00000451137.6 protein_coding 85580761,85581365,85581928,85582416,85582740 85581047,85581578,85582284,85582624,85583962 Gene ID= ENSG00000142871.16 TPM= 94.18 Transcript Type= protein_coding chr1 85652808 85708418 85652808 85708418 - ENST00000370574.3@ZNHIT6 ENST00000370574.3 protein_coding 85707629,85706442,85706249,85706078,85702157,85680836,85678701,85677236,85657847,85652808 85708418,85706507,85706355,85706163,85702260,85680904,85678781,85677313,85657971,85654098 Gene ID= ENSG00000117174.10 TPM= 9.96 Transcript Type= protein_coding chr1 86348108 86396342 86348108 86396342 - transcript4538.chr1.nic@ODF2L transcript4538.chr1.nic protein_coding 86396033,86386915,86385458,86384676,86383134,86382931,86382242,86376233,86372431,86371018,86360426,86358787,86356444,86354774,86354530,86352859,86348108 86396342,86387086,86385590,86384801,86383196,86383002,86382358,86376418,86372540,86371153,86360536,86358891,86356602,86354859,86354692,86352984,86348878 Gene ID= ENSG00000122417.15 TPM= 3.17 Transcript Type= NA chr1 86348332 86396274 86348332 86396274 - transcript4544.chr1.nic@ODF2L transcript4544.chr1.nic protein_coding 86396033,86386915,86384676,86383134,86382931,86382242,86376233,86372431,86371018,86360426,86358787,86354774,86354530,86352859,86348332 86396274,86387086,86384801,86383196,86383002,86382358,86376418,86372540,86371153,86360536,86358891,86354859,86354692,86352984,86348878 Gene ID= ENSG00000122417.15 TPM= 2.26 Transcript Type= NA chr1 86348108 86396342 86348108 86396342 - transcript4546.chr1.nic@ODF2L transcript4546.chr1.nic protein_coding 86396033,86386915,86385458,86384676,86383134,86382931,86376233,86372431,86371018,86360426,86358787,86354774,86354530,86352859,86348108 86396342,86387086,86385590,86384801,86383196,86383002,86376418,86372540,86371153,86360536,86358891,86354859,86354692,86352984,86348878 Gene ID= ENSG00000122417.15 TPM= 3.17 Transcript Type= NA chr1 86348108 86396342 86348108 86396342 - transcript4547.chr1.nic@ODF2L transcript4547.chr1.nic protein_coding 86396033,86386915,86384676,86383134,86382931,86376233,86372431,86371018,86360426,86358787,86354774,86354530,86352859,86348108 86396342,86387086,86384801,86383196,86383002,86376418,86372540,86371153,86360536,86358891,86354859,86354692,86352984,86348878 Gene ID= ENSG00000122417.15 TPM= 2.26 Transcript Type= NA chr1 86385728 86396323 86385728 86396323 - ENST00000478286.2@ODF2L ENST00000478286.2 protein_coding 86396033,86385728 86396323,86387086 Gene ID= ENSG00000122417.15 TPM= 2.72 Transcript Type= protein_coding chr1 86704570 86748176 86704570 86748176 + ENST00000535010.5@SH3GLB1 ENST00000535010.5 protein_coding 86704570,86719507,86722540,86724313,86734602,86735079,86742208,86743128 86704971,86719635,86722673,86724405,86734691,86735179,86742436,86748176 Gene ID= ENSG00000097033.14 TPM= 6.34 Transcript Type= protein_coding chr1 86704576 86748184 86704576 86748184 + ENST00000370558.8@SH3GLB1 ENST00000370558.8 protein_coding 86704576,86715724,86719507,86722540,86724313,86734602,86735079,86742208,86743128 86704971,86715865,86719635,86722673,86724405,86734691,86735179,86742436,86748184 Gene ID= ENSG00000097033.14 TPM= 93.27 Transcript Type= protein_coding chr1 86862447 86914424 86862447 86914424 - ENST00000611507.4@SELENOF ENST00000611507.4 protein_coding 86914028,86903281,86880693,86880662,86862447 86914424,86903448,86880725,86880689,86863605 Gene ID= ENSG00000183291.15 TPM= 7.4 Transcript Type= protein_coding chr1 86862445 86914365 86862445 86914365 - ENST00000331835.9@SELENOF ENST00000331835.9 protein_coding 86914028,86903281,86880662,86868053,86862445 86914365,86903448,86880725,86868102,86863605 Gene ID= ENSG00000183291.15 TPM= 131.46 Transcript Type= protein_coding chr1 86862725 86914134 86862725 86914134 - ENST00000370554.5@SELENOF ENST00000370554.5 protein_coding 86914028,86903281,86880662,86862725 86914134,86903448,86880725,86863605 Gene ID= ENSG00000183291.15 TPM= 5.13 Transcript Type= protein_coding chr1 86914648 87098445 86914648 87098445 + ENST00000370551.8@HS2ST1 ENST00000370551.8 protein_coding 86914648,87072934,87084194,87092531,87097838 86915160,87073172,87084279,87092669,87098445 Gene ID= ENSG00000153936.16 TPM= 28.52 Transcript Type= protein_coding chr1 86914674 87109998 86914674 87109998 + ENST00000370550.9@HS2ST1 ENST00000370550.9 protein_coding 86914674,87072934,87084194,87092531,87097838,87103432,87104470 86915160,87073172,87084279,87092669,87097935,87103589,87109998 Gene ID= ENSG00000153936.16 TPM= 83.76 Transcript Type= protein_coding chr1 87328468 87348923 87328468 87348923 + ENST00000370544.9@LMO4 ENST00000370544.9 protein_coding 87328468,87332013,87339536,87340047,87344788 87329244,87332251,87339632,87340202,87348923 Gene ID= ENSG00000143013.12 TPM= 9.06 Transcript Type= protein_coding chr1 88684239 88835921 88684239 88835921 + transcript4566.chr1.nnic@PKN2 transcript4566.chr1.nnic protein_coding 88684239,88740988,88760222,88770352,88771421,88771663,88784639,88786104,88804391,88804846,88805497,88805891,88807313,88807529,88807684,88813557,88821941,88824310,88828481,88832744,88833077,88833245 88684628,88741288,88760376,88770469,88771566,88771879,88784776,88786213,88804534,88804921,88805671,88806017,88807443,88807604,88807775,88813733,88822003,88824386,88828623,88832851,88833157,88835921 Gene ID= ENSG00000065243.19 TPM= 3.62 Transcript Type= NA chr1 88684222 88836255 88684222 88836255 + ENST00000370521.7@PKN2 ENST00000370521.7 protein_coding 88684222,88740988,88760222,88770352,88771421,88771663,88784639,88786104,88804391,88804846,88805497,88805891,88807313,88807529,88807684,88813557,88821941,88824310,88828481,88832744,88833077,88833245 88684628,88741288,88760376,88770469,88771566,88771879,88784824,88786213,88804534,88804921,88805671,88806017,88807443,88807604,88807775,88813733,88822003,88824386,88828623,88832851,88833157,88836255 Gene ID= ENSG00000065243.19 TPM= 9.96 Transcript Type= protein_coding chr1 88852932 88891618 88852932 88891618 - ENST00000370500.9@GTF2B ENST00000370500.9 protein_coding 88891483,88887261,88863981,88860140,88859882,88857206,88852932 88891618,88887367,88864114,88860286,88860011,88857487,88853346 Gene ID= ENSG00000137947.11 TPM= 35.32 Transcript Type= protein_coding chr1 88935773 88992776 88935773 88992776 - ENST00000370491.7@KYAT3 ENST00000370491.7 protein_coding 88992585,88969409,88968670,88964829,88962059,88961381,88961167,88955149,88953063,88949091,88943350,88943005,88935773 88992776,88969467,88968814,88964978,88962145,88961506,88961287,88955225,88953152,88949277,88943423,88943091,88936245 Gene ID= ENSG00000137944.17 TPM= 23.54 Transcript Type= protein_coding chr1 88979459 88992960 88979459 88992960 - ENST00000399794.6@RBMXL1 ENST00000399794.6 protein_coding 88992585,88988252,88979459 88992960,88988351,88984066 Gene ID= ENSG00000213516.9 TPM= 4.53 Transcript Type= protein_coding chr1 88979456 88992772 88979456 88992772 - ENST00000321792.5@RBMXL1 ENST00000321792.5 protein_coding 88992585,88979456 88992772,88984066 Gene ID= ENSG00000213516.9 TPM= 6.34 Transcript Type= protein_coding chr1 89006684 89022888 89006684 89022888 - transcript4580.chr1.nic@GBP3 transcript4580.chr1.nic protein_coding 89022684,89020532,89020126,89015287,89014405,89014083,89013185,89011747,89010904,89009392,89008947,89006684 89022888,89020743,89020211,89015414,89014656,89014279,89013427,89012027,89011116,89009494,89009140,89007852 Gene ID= ENSG00000117226.11 TPM= 2.72 Transcript Type= NA chr1 89006684 89022888 89006684 89022888 - transcript4586.chr1.nnic@GBP3 transcript4586.chr1.nnic protein_coding 89022684,89020532,89015287,89014547,89014083,89011747,89010904,89009392,89008947,89006684 89022888,89020743,89015414,89014656,89014279,89012027,89011116,89009494,89009140,89007852 Gene ID= ENSG00000117226.11 TPM= 4.53 Transcript Type= NA chr1 89006666 89022882 89006666 89022882 - ENST00000370481.8@GBP3 ENST00000370481.8 protein_coding 89022684,89020532,89015287,89014547,89014083,89013185,89011747,89010904,89009392,89008947,89006666 89022882,89020743,89015414,89014656,89014279,89013427,89012027,89011116,89009494,89009140,89007852 Gene ID= ENSG00000117226.11 TPM= 34.41 Transcript Type= protein_coding chr1 89052319 89065360 89052319 89065360 - ENST00000370473.4@GBP1 ENST00000370473.4 protein_coding 89065160,89063045,89060197,89059317,89058841,89057992,89056854,89056016,89055113,89054682,89052319 89065360,89063253,89060324,89059426,89059043,89058234,89057134,89056228,89055215,89054875,89053468 Gene ID= ENSG00000117228.9 TPM= 18.11 Transcript Type= protein_coding chr1 89106127 89126158 89106127 89126158 - transcript4593.chr1.nic@GBP2 transcript4593.chr1.nic protein_coding 89125863,89121777,89121143,89120179,89117577,89116992,89114016,89112472,89110164,89109677,89108023,89106127 89126158,89121983,89121270,89120288,89117773,89117234,89114296,89112684,89110266,89109870,89108291,89107052 Gene ID= ENSG00000162645.12 TPM= 13.43 Transcript Type= NA chr1 89108000 89126114 89108000 89126114 - ENST00000370466.3@GBP2 ENST00000370466.3 protein_coding 89125863,89121777,89121143,89120179,89117577,89116992,89114016,89112472,89110164,89109677,89108000 89126114,89121983,89121270,89120288,89117773,89117234,89114296,89112684,89110266,89109870,89108291 Gene ID= ENSG00000162645.12 TPM= 382.89 Transcript Type= protein_coding chr1 89258955 89272889 89258955 89272889 - transcript4604.chr1.nnic@GBP5 transcript4604.chr1.nnic protein_coding 89272452,89270755,89269366,89268729,89267417,89266957,89266346,89264686,89263736,89262683,89262220,89258955 89272889,89270862,89269574,89268856,89267526,89267153,89266588,89264966,89263948,89262785,89262401,89260817 Gene ID= ENSG00000154451.14 TPM= 2.72 Transcript Type= NA chr1 89524893 89596555 89524893 89596555 + transcript4607.chr1.nnic@LRRC8B transcript4607.chr1.nnic protein_coding 89524893,89549915,89568247,89568439,89579591,89582625,89592771 89525022,89549971,89568307,89568493,89579688,89584789,89596555 Gene ID= ENSG00000197147.13 TPM= 10.87 Transcript Type= NA chr1 89821033 89936000 89821033 89936000 + transcript4617.chr1.nnic@AC093423.3 transcript4617.chr1.nnic protein_coding 89821033,89843638,89933067 89821727,89843782,89936000 Gene ID= ENSG00000271949.1 TPM= 5.43 Transcript Type= NA chr1 89995112 90028222 89995112 90028222 + transcript4624.chr1.nnic@ZNF326 transcript4624.chr1.nnic protein_coding 89995112,89998110,90005003,90005133,90010088,90013126,90017317,90018685,90020792,90022250,90027354 89995273,89998154,90005038,90005244,90010286,90013237,90017464,90018784,90020922,90022345,90028222 Gene ID= ENSG00000162664.16 TPM= 6.34 Transcript Type= NA chr1 89995112 90028226 89995112 90028226 + ENST00000394583.7@ZNF326 ENST00000394583.7 protein_coding 89995112,89998110,90005003,90010088,90013126,90017317,90018685,90020792,90022250,90027354 89995273,89998154,90005092,90010286,90013237,90017464,90018784,90020922,90022345,90028226 Gene ID= ENSG00000162664.16 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr1 90915302 91022006 90915302 91022006 - transcript4636.chr1.nnic@ZNF644 transcript4636.chr1.nnic protein_coding 91021689,90982310,90938272,90937485,90918052,90915302 91022006,90982370,90941309,90938090,90918154,90916990 Gene ID= ENSG00000122482.20 TPM= 1.81 Transcript Type= NA chr1 90915302 91022006 90915302 91022006 - transcript4639.chr1.nnic@ZNF644 transcript4639.chr1.nnic protein_coding 91021689,90982310,90918052,90915302 91022006,90982370,90918154,90916990 Gene ID= ENSG00000122482.20 TPM= 2.72 Transcript Type= NA chr1 91680345 91886279 91680345 91886279 - ENST00000212355.8@TGFBR3 ENST00000212355.8 protein_coding 91885878,91861471,91797287,91758613,91734776,91729805,91727659,91721955,91719893,91719312,91716568,91716236,91712243,91708663,91698089,91695672,91680345 91886279,91861644,91797471,91758750,91734959,91729973,91727806,91722144,91720230,91719464,91716708,91716394,91712542,91708783,91698130,91695779,91683857 Gene ID= ENSG00000069702.10 TPM= 47.99 Transcript Type= protein_coding chr1 92080520 92183645 92080520 92183645 + transcript4651.chr1.nic@AC104836.1 transcript4651.chr1.nic protein_coding 92080520,92088698,92102473,92107884,92129687,92139350,92141115,92147180,92147684,92166958,92167848,92168866,92171399,92176829,92177811,92178312,92180265 92080720,92088895,92102669,92108001,92129776,92139430,92141211,92147268,92147786,92167140,92167985,92168995,92171460,92177546,92177898,92178451,92183645 Gene ID= ENSG00000189195.11 TPM= 4.53 Transcript Type= NA chr1 92246402 92298976 92246402 92298976 - ENST00000370360.7@GLMN ENST00000370360.7 protein_coding 92298925,92297961,92297404,92291418,92290198,92288914,92286490,92271465,92269723,92268105,92267913,92266700,92266419,92264554,92263623,92262863,92247878,92247062,92246402 92298976,92298029,92297529,92291537,92290306,92289151,92286592,92271652,92269776,92268135,92268002,92266741,92266492,92264638,92263732,92262926,92247989,92247144,92246646 Gene ID= ENSG00000174842.16 TPM= 3.62 Transcript Type= protein_coding chr1 92508700 92785139 92508700 92785139 - transcript4664.chr1.nnic@EVI5 transcript4664.chr1.nnic protein_coding 92784836,92736398,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92663420,92662719,92636202,92625794,92624176,92607581,92605307,92563642,92508700 92785139,92736627,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92663452,92662865,92636336,92625934,92624334,92607727,92605402,92563737,92513970 Gene ID= ENSG00000067208.14 TPM= 3.08 Transcript Type= NA chr1 92508700 92784779 92508700 92784779 - transcript4666.chr1.nnic@EVI5 transcript4666.chr1.nnic protein_coding 92784254,92736398,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92663420,92636202,92625794,92624176,92607581,92605307,92563642,92508700 92784779,92736627,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92663452,92636336,92625934,92624334,92607727,92605402,92563737,92513970 Gene ID= ENSG00000067208.14 TPM= 4.89 Transcript Type= NA chr1 92508700 92785139 92508700 92785139 - transcript4667.chr1.nnic@EVI5 transcript4667.chr1.nnic protein_coding 92784836,92736398,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92663420,92636202,92625794,92624176,92607581,92605307,92563642,92508700 92785139,92736627,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92663452,92636336,92625934,92624334,92607727,92605402,92563737,92513970 Gene ID= ENSG00000067208.14 TPM= 3.98 Transcript Type= NA chr1 92508700 92785139 92508700 92785139 - transcript4672.chr1.nnic@EVI5 transcript4672.chr1.nnic protein_coding 92784836,92736398,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92636202,92625794,92624176,92607581,92605307,92563642,92508700 92785139,92736627,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92636336,92625934,92624334,92607727,92605402,92563737,92513970 Gene ID= ENSG00000067208.14 TPM= 3.98 Transcript Type= NA chr1 92508700 92785108 92508700 92785108 - transcript4674.chr1.nic@EVI5 transcript4674.chr1.nic protein_coding 92784836,92704555,92703395,92702141,92697860,92695310,92694299,92693802,92677158,92665939,92636202,92625794,92624176,92607581,92605307,92563642,92508700 92785108,92704744,92703619,92702215,92697985,92695453,92694388,92693899,92677218,92665992,92636336,92625934,92624334,92607727,92605402,92563737,92513970 Gene ID= ENSG00000067208.14 TPM= 3.08 Transcript Type= NA chr1 92832025 92841924 92832025 92841924 + ENST00000370321.7@RPL5 ENST00000370321.7 protein_coding 92832025,92833389,92833545,92834779,92836190,92837456,92840551,92841766 92832117,92833458,92833660,92834913,92836392,92837633,92840639,92841924 Gene ID= ENSG00000122406.12 TPM= 399.35 Transcript Type= protein_coding chr1 92842167 92961500 92842167 92961500 - ENST00000370310.4@FAM69A ENST00000370310.4 protein_coding 92961376,92876296,92850848,92847183,92842167 92961500,92876430,92850955,92847359,92844195 Gene ID= ENSG00000154511.11 TPM= 2.72 Transcript Type= protein_coding chr1 93079235 93139079 93079235 93139079 + ENST00000545708.5@MTF2 ENST00000545708.5 protein_coding 93079235,93110230,93110327,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670 93079531,93110246,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139079 Gene ID= ENSG00000143033.17 TPM= 1.36 Transcript Type= protein_coding chr1 93079238 93139081 93079238 93139081 + ENST00000370298.8@MTF2 ENST00000370298.8 protein_coding 93079238,93110230,93110545,93114688,93114988,93115470,93118345,93119333,93120549,93127232,93129278,93133703,93133928,93134091,93136670 93079531,93110428,93110626,93114783,93115088,93115618,93118440,93119401,93120672,93127299,93129448,93133808,93133980,93134195,93139081 Gene ID= ENSG00000143033.17 TPM= 7.7 Transcript Type= protein_coding chr1 93079277 93120299 93079277 93120299 + transcript4686.chr1.nic@MTF2 transcript4686.chr1.nic protein_coding 93079277,93110230,93110545,93114688,93114988,93115470,93118345,93119333 93079531,93110428,93110626,93114783,93115088,93115618,93118440,93120299 Gene ID= ENSG00000143033.17 TPM= 2.72 Transcript Type= NA chr1 93149742 93180728 93149742 93180728 - ENST00000370282.7@TMED5 ENST00000370282.7 protein_coding 93180054,93160129,93156300,93149742 93180728,93160226,93156483,93154888 Gene ID= ENSG00000117500.12 TPM= 153.04 Transcript Type= protein_coding chr1 93151858 93180392 93151858 93180392 - transcript4693.chr1.nnic@TMED5 transcript4693.chr1.nnic protein_coding 93180054,93160129,93156417,93151858 93180392,93160226,93156483,93154888 Gene ID= ENSG00000117500.12 TPM= 5.43 Transcript Type= NA chr1 93310114 93345846 93310114 93345846 - transcript4699.chr1.nic@CCDC18-AS1 transcript4699.chr1.nic processed_transcript 93345724,93340458,93339649,93339357,93325769,93324635,93310114 93345846,93340510,93339679,93339536,93325895,93324729,93311608 Gene ID= ENSG00000223745.7 TPM= 1.81 Transcript Type= NA chr1 93332253 93345846 93332253 93345846 - transcript4702.chr1.nnic@CCDC18-AS1 transcript4702.chr1.nnic processed_transcript 93345724,93340458,93339649,93339357,93337377,93332253 93345846,93340510,93339679,93339536,93339274,93333463 Gene ID= ENSG00000223745.7 TPM= 3.62 Transcript Type= NA chr1 93345888 93369498 93345888 93369498 + ENST00000370272.8@DR1 ENST00000370272.8 protein_coding 93345888,93353908,93360493 93346865,93354071,93369498 Gene ID= ENSG00000117505.12 TPM= 94.18 Transcript Type= protein_coding chr1 93448057 93554659 93448057 93554659 + transcript4710.chr1.nnic@FNBP1L transcript4710.chr1.nnic protein_coding 93448057,93499468,93522082,93522888,93523344,93524261,93529652,93530755,93532922,93534705,93544107,93546842,93547347,93549278,93550947,93552409 93448305,93499583,93522135,93523091,93523491,93524323,93529756,93530883,93533068,93534908,93544216,93546974,93547441,93549426,93551105,93554659 Gene ID= ENSG00000137942.16 TPM= 3.17 Transcript Type= NA chr1 93448057 93554655 93448057 93554655 + transcript4712.chr1.nnic@FNBP1L transcript4712.chr1.nnic protein_coding 93448057,93499468,93522082,93523344,93524261,93529652,93530755,93532922,93534705,93544107,93546842,93547347,93549278,93550947,93553049 93448305,93499583,93522135,93523491,93524323,93529756,93530883,93533068,93534908,93544216,93546974,93547441,93549426,93551105,93554655 Gene ID= ENSG00000137942.16 TPM= 1.81 Transcript Type= NA chr1 93448131 93554659 93448131 93554659 + ENST00000260506.12@FNBP1L ENST00000260506.12 protein_coding 93448131,93499468,93522082,93523344,93524261,93529652,93530755,93532922,93534705,93544107,93546842,93547347,93549278,93550947 93448305,93499583,93522135,93523491,93524323,93529756,93530883,93533068,93534908,93544216,93546974,93547441,93549426,93554659 Gene ID= ENSG00000137942.16 TPM= 4.98 Transcript Type= protein_coding chr1 93561746 93681837 93561746 93681837 - transcript4720.chr1.nnic@BCAR3 transcript4720.chr1.nnic protein_coding 93681598,93674614,93642304,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561746 93681837,93674941,93642343,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419 Gene ID= ENSG00000137936.16 TPM= 2.26 Transcript Type= NA chr1 93561791 93681829 93561791 93681829 - ENST00000260502.10@BCAR3 ENST00000260502.10 protein_coding 93681598,93674614,93642304,93592265,93588977,93584018,93582301,93576014,93571670,93567740,93567279,93561791 93681829,93674941,93642343,93592393,93589419,93584121,93582953,93576129,93571841,93567851,93567491,93562419 Gene ID= ENSG00000137936.16 TPM= 72.9 Transcript Type= protein_coding chr1 93885205 93909410 93885205 93909410 - ENST00000370238.7@GCLM ENST00000370238.7 protein_coding 93909038,93904523,93901585,93897839,93896618,93894614,93885205 93909410,93904588,93901669,93897898,93896820,93894728,93889159 Gene ID= ENSG00000023909.9 TPM= 74.25 Transcript Type= protein_coding chr1 94172599 94247775 94172599 94247775 - transcript4733.chr1.nnic@ARHGAP29 transcript4733.chr1.nnic protein_coding 94247565,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172599 94247775,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749 Gene ID= ENSG00000137962.12 TPM= 4.83 Transcript Type= NA chr1 94172599 94247756 94172599 94247756 - transcript4734.chr1.nnic@ARHGAP29 transcript4734.chr1.nnic protein_coding 94247565,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94202544,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172599 94247756,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94201857,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749 Gene ID= ENSG00000137962.12 TPM= 2.11 Transcript Type= NA chr1 94172599 94237578 94172599 94237578 - transcript4735.chr1.nic@ARHGAP29 transcript4735.chr1.nic protein_coding 94237415,94231407,94220258,94209254,94208832,94205635,94205061,94203930,94203100,94202918,94201720,94189926,94189216,94188837,94186499,94185342,94184872,94184151,94179725,94177852,94177612,94172599 94237578,94231643,94220392,94209350,94208904,94205683,94205198,94203994,94203210,94202998,94202732,94190083,94189352,94188941,94186597,94185481,94185060,94184288,94179957,94178167,94177720,94174749 Gene ID= ENSG00000137962.12 TPM= 3.02 Transcript Type= NA chr1 94418395 94518662 94418395 94518662 + transcript4738.chr1.nnic@ABCD3 transcript4738.chr1.nnic protein_coding 94418395,94455733,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052 94418588,94455804,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518662 Gene ID= ENSG00000117528.11 TPM= 2.42 Transcript Type= NA chr1 94418370 94518662 94418370 94518662 + transcript4740.chr1.nnic@ABCD3 transcript4740.chr1.nnic protein_coding 94418370,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506496,94515146,94517052 94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518662 Gene ID= ENSG00000117528.11 TPM= 1.81 Transcript Type= NA chr1 94418395 94518496 94418395 94518496 + transcript4745.chr1.nnic@ABCD3 transcript4745.chr1.nnic protein_coding 94418395,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052 94418588,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518496 Gene ID= ENSG00000117528.11 TPM= 2.42 Transcript Type= NA chr1 94418455 94518663 94418455 94518663 + ENST00000370214.8@ABCD3 ENST00000370214.8 protein_coding 94418455,94458607,94464775,94467919,94473766,94475143,94475614,94478259,94480464,94483170,94487542,94487694,94487892,94489725,94489903,94491184,94498602,94498783,94498945,94499495,94506538,94515146,94517052 94418588,94458643,94464873,94468007,94473835,94475240,94475737,94478315,94480606,94483239,94487611,94487791,94487983,94489816,94489975,94491247,94498679,94498848,94499034,94499614,94506642,94515202,94518663 Gene ID= ENSG00000117528.11 TPM= 44.98 Transcript Type= protein_coding chr1 94616358 94820239 94616358 94820239 - transcript4762.chr1.nic@SLC44A3-AS1 transcript4762.chr1.nic transcribed_processed_pseudogene 94819956,94732258,94705439,94679425,94638437,94622719,94616358 94820239,94732437,94705557,94679607,94638558,94624609,94617071 Gene ID= ENSG00000224081.8 TPM= 1.81 Transcript Type= NA chr1 94864218 94895249 94864218 94895249 + transcript4767.chr1.nnic@SLC44A3 transcript4767.chr1.nnic protein_coding 94864218,94864743,94867331,94891130,94892281,94894818 94864277,94864899,94867417,94891267,94892517,94895249 Gene ID= ENSG00000143036.16 TPM= 7.24 Transcript Type= NA chr1 94820336 94829794 94820336 94829794 + transcript4772.chr1.nic@SLC44A3 transcript4772.chr1.nic protein_coding 94820336,94820949,94824493,94827507,94828493 94820478,94821056,94824635,94827643,94829794 Gene ID= ENSG00000143036.16 TPM= 2.72 Transcript Type= NA chr1 94820342 94895052 94820342 94895052 + ENST00000446120.6@SLC44A3 ENST00000446120.6 protein_coding 94820342,94824493,94827507,94828493,94837711,94839948,94842000,94845278,94857335,94864743,94867331,94891130,94892281,94894818 94820478,94824635,94827643,94828586,94837871,94840037,94842124,94845464,94857500,94864899,94867417,94891267,94892517,94895052 Gene ID= ENSG00000143036.16 TPM= 5.43 Transcript Type= protein_coding chr1 94896951 94927278 94896951 94927278 - ENST00000370206.8@CNN3 ENST00000370206.8 protein_coding 94926838,94903403,94903122,94902121,94901669,94899371,94896951 94927278,94903524,94903188,94902258,94901785,94899517,94898083 Gene ID= ENSG00000117519.15 TPM= 1222.56 Transcript Type= protein_coding chr1 94927307 94963269 94927307 94963269 + transcript4793.chr1.nnic@AC105942.1 transcript4793.chr1.nnic antisense_RNA 94927307,94931872,94939829,94961317,94962925 94928402,94931985,94939925,94961433,94963269 Gene ID= ENSG00000235501.5 TPM= 2.72 Transcript Type= NA chr1 94927307 94963269 94927307 94963269 + transcript4799.chr1.nic@AC105942.1 transcript4799.chr1.nic antisense_RNA 94927307,94931872,94961317,94962979 94928402,94931985,94961433,94963269 Gene ID= ENSG00000235501.5 TPM= 10.87 Transcript Type= NA chr1 94927367 94963269 94927367 94963269 + transcript4803.chr1.nnic@AC105942.1 transcript4803.chr1.nnic antisense_RNA 94927367,94931872,94962925 94928402,94931985,94963269 Gene ID= ENSG00000235501.5 TPM= 1.81 Transcript Type= NA chr1 94927363 94963269 94927363 94963269 + transcript4804.chr1.nic@AC105942.1 transcript4804.chr1.nic antisense_RNA 94927363,94931872,94962979 94928402,94931985,94963269 Gene ID= ENSG00000235501.5 TPM= 4.53 Transcript Type= NA chr1 94982599 95072921 94982599 95072921 - transcript4807.chr1.nnic@ALG14 transcript4807.chr1.nnic protein_coding 95072763,95064866,95041493,95027129,94982599 95072921,95065017,95041612,95027260,94983306 Gene ID= ENSG00000172339.9 TPM= 5.43 Transcript Type= NA chr1 94974407 95072945 94974407 95072945 - ENST00000370205.5@ALG14 ENST00000370205.5 protein_coding 95072763,95064866,95027129,94974407 95072945,95065017,95027260,94983306 Gene ID= ENSG00000172339.9 TPM= 43.47 Transcript Type= protein_coding chr1 95117380 95194947 95117380 95194947 + transcript4812.chr1.nnic@TMEM56 transcript4812.chr1.nnic protein_coding 95117380,95138275,95143891,95148702,95150208,95151325,95173816,95191550 95117617,95138402,95144056,95148791,95150266,95151419,95173889,95194947 Gene ID= ENSG00000152078.9 TPM= 1.81 Transcript Type= NA chr1 95117406 95195401 95117406 95195401 + transcript4815.chr1.nic@TMEM56 transcript4815.chr1.nic protein_coding 95117406,95143891,95148702,95150208,95151325,95173816,95191550 95118091,95144056,95148791,95150266,95151419,95173889,95195401 Gene ID= ENSG00000152078.9 TPM= 8.15 Transcript Type= NA chr1 95117338 95197607 95117338 95197607 + ENST00000370203.8@TMEM56 ENST00000370203.8 protein_coding 95117338,95143891,95148702,95150208,95151325,95173816,95191550 95117617,95144056,95148791,95150266,95151419,95173889,95197607 Gene ID= ENSG00000152078.9 TPM= 38.94 Transcript Type= protein_coding chr1 95234155 95247225 95234155 95247225 + ENST00000370202.4@RWDD3 ENST00000370202.4 protein_coding 95234155,95244211,95246542,95246756 95234315,95244698,95246657,95247225 Gene ID= ENSG00000122481.16 TPM= 3.62 Transcript Type= protein_coding chr1 95234211 95247223 95234211 95247223 + ENST00000263893.10@RWDD3 ENST00000263893.10 protein_coding 95234211,95244211,95246756 95234315,95244715,95247223 Gene ID= ENSG00000122481.16 TPM= 1.81 Transcript Type= protein_coding chr1 96721783 96823738 96721783 96823738 + ENST00000609116.5@PTBP2 ENST00000609116.5 protein_coding 96721783,96723564,96751425,96769703,96770708,96777585,96777836,96785059,96804800,96806419,96806866,96812712,96813029,96813273 96721872,96723594,96751500,96769875,96770851,96777749,96777946,96785254,96804939,96806452,96806958,96812928,96813106,96823738 Gene ID= ENSG00000117569.18 TPM= 1.81 Transcript Type= protein_coding chr1 96721783 96814787 96721783 96814787 + transcript4832.chr1.nic@PTBP2 transcript4832.chr1.nic protein_coding 96721783,96723564,96751425,96769703,96770708,96777585,96777836,96785059,96804785,96806866,96812712,96813029,96813276 96721872,96723594,96751500,96769875,96770851,96777749,96777946,96785254,96804939,96806958,96812928,96813106,96814787 Gene ID= ENSG00000117569.18 TPM= 2.72 Transcript Type= NA chr1 97077746 97921037 97077746 97921037 - transcript4846.chr1.nnic@DPYD transcript4846.chr1.nnic protein_coding 97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97515726,97450059,97382393,97373561,97306177,97234852,97193069,97098489,97082330,97077746 97921037,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97515941,97450223,97382461,97373644,97306297,97234994,97193248,97098632,97082470,97079146 Gene ID= ENSG00000188641.12 TPM= 1.81 Transcript Type= NA chr1 97731189 97921037 97731189 97921037 - transcript4848.chr1.nnic@DPYD transcript4848.chr1.nnic protein_coding 97920884,97883264,97828114,97740392,97731189 97921037,97883374,97828196,97740479,97732470 Gene ID= ENSG00000188641.12 TPM= 1.81 Transcript Type= NA chr1 97077743 97921023 97077743 97921023 - ENST00000370192.7@DPYD ENST00000370192.7 protein_coding 97920884,97883264,97828114,97740392,97721510,97699351,97691717,97679095,97595059,97593218,97573760,97549560,97515726,97450059,97382393,97373561,97306177,97305259,97234852,97193069,97098489,97082330,97077743 97921023,97883374,97828196,97740479,97721671,97699547,97691798,97679182,97595166,97593387,97573970,97549744,97515941,97450223,97382461,97373644,97306297,97305378,97234994,97193248,97098632,97082470,97079146 Gene ID= ENSG00000188641.12 TPM= 59.77 Transcript Type= protein_coding chr1 98661678 98760498 98661678 98760498 + transcript4852.chr1.nic@SNX7 transcript4852.chr1.nic protein_coding 98661678,98684885,98691075,98691535,98695518,98698706,98701817,98760054 98661911,98685067,98691185,98691699,98695716,98698905,98701903,98760498 Gene ID= ENSG00000162627.16 TPM= 4.53 Transcript Type= NA chr1 98661723 98760500 98661723 98760500 + ENST00000306121.7@SNX7 ENST00000306121.7 protein_coding 98661723,98684885,98691075,98691535,98695518,98698706,98701817,98738237,98760054 98661911,98685067,98691185,98691699,98695716,98698905,98701903,98738389,98760500 Gene ID= ENSG00000162627.16 TPM= 53.43 Transcript Type= protein_coding chr1 99645943 99694541 99645943 99694541 + ENST00000263174.8@PALMD ENST00000263174.8 protein_coding 99645943,99662319,99667642,99686676,99686930,99687076,99688775,99694019 99646362,99662399,99667766,99686790,99686963,99687189,99689872,99694541 Gene ID= ENSG00000099260.10 TPM= 139.45 Transcript Type= protein_coding chr1 99850489 99924020 99850489 99924020 + ENST00000294724.8@AGL ENST00000294724.8 protein_coding 99850489,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534 99850898,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020 Gene ID= ENSG00000162688.16 TPM= 2.26 Transcript Type= protein_coding chr1 99850084 99924020 99850084 99924020 + ENST00000361915.7@AGL ENST00000361915.7 protein_coding 99850084,99850975,99861503,99862257,99864386,99870400,99870758,99874687,99875154,99875358,99876458,99877641,99879923,99880632,99881076,99881292,99881541,99884120,99884339,99884569,99887978,99891220,99891606,99892432,99896286,99900636,99902683,99910712,99912405,99913527,99915389,99916410,99916598,99921534 99850415,99851124,99861713,99862423,99864589,99870581,99870869,99874810,99875256,99875455,99876597,99877828,99880046,99880795,99881177,99881447,99881691,99884244,99884451,99884703,99888108,99891356,99891739,99892607,99896388,99900861,99902794,99910847,99912517,99913738,99915486,99916497,99916731,99924020 Gene ID= ENSG00000162688.16 TPM= 4.07 Transcript Type= protein_coding chr1 99969561 100035637 99969561 100035637 + ENST00000533028.7@SLC35A3 ENST00000533028.7 protein_coding 99969561,99993537,99999261,100007034,100011365,100015302,100017682,100022386 99970162,99993741,99999415,100007156,100011533,100015420,100017815,100035637 Gene ID= ENSG00000117620.14 TPM= 10.87 Transcript Type= protein_coding chr1 100038097 100083377 100038097 100083377 + ENST00000370152.7@MFSD14A ENST00000370152.7 protein_coding 100038097,100049909,100058666,100059878,100061835,100067977,100068473,100069614,100077165,100078451,100080496,100082003 100038316,100050004,100058728,100060005,100061949,100068195,100068586,100069685,100077277,100078548,100080659,100083377 Gene ID= ENSG00000156875.13 TPM= 124.06 Transcript Type= protein_coding chr1 100083563 100132955 100083563 100132955 - ENST00000287482.5@SASS6 ENST00000287482.5 protein_coding 100132750,100125882,100123210,100122380,100121378,100120394,100119018,100110292,100107810,100107628,100107374,100106912,100105767,100102955,100088139,100085536,100083563 100132955,100125942,100123289,100122484,100121549,100120459,100119137,100110483,100108004,100107717,100107553,100106993,100105903,100103083,100088236,100085630,100085434 Gene ID= ENSG00000156876.9 TPM= 2.72 Transcript Type= protein_coding chr1 100133163 100150497 100133163 100150497 + transcript4886.chr1.nnic@TRMT13 transcript4886.chr1.nnic protein_coding 100133163,100136882,100137019,100139649,100140182,100140408,100140852,100143137,100144069,100148093,100148625 100133315,100136928,100137085,100139711,100140251,100140514,100141019,100143209,100144143,100148326,100150497 Gene ID= ENSG00000122435.9 TPM= 1.81 Transcript Type= NA chr1 100133163 100150497 100133163 100150497 + ENST00000370141.6@TRMT13 ENST00000370141.6 protein_coding 100133163,100136882,100137019,100139649,100140182,100140408,100140852,100143137,100144069,100147894,100148625 100133315,100136928,100137085,100139711,100140251,100140514,100141019,100143209,100144143,100148326,100150497 Gene ID= ENSG00000122435.9 TPM= 5.43 Transcript Type= protein_coding chr1 100147648 100178259 100147648 100178259 - transcript4895.chr1.nnic@LRRC39 transcript4895.chr1.nnic protein_coding 100178135,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100147648 100178259,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149097 Gene ID= ENSG00000122477.12 TPM= 3.62 Transcript Type= NA chr1 100148853 100178215 100148853 100178215 - ENST00000370137.5@LRRC39 ENST00000370137.5 protein_coding 100178135,100173331,100168404,100160466,100159259,100158231,100156172,100155051,100152385,100148853 100178215,100173370,100168594,100160571,100159415,100158367,100156317,100155203,100152524,100149097 Gene ID= ENSG00000122477.12 TPM= 7.24 Transcript Type= protein_coding chr1 100194078 100249846 100194078 100249846 - transcript4901.chr1.nnic@DBT transcript4901.chr1.nnic protein_coding 100249770,100240761,100235436,100230733,100218626,100215983,100214817,100210694,100206445,100206230,100200643,100194078 100249846,100240884,100235511,100230914,100218747,100216199,100214983,100210771,100206636,100206301,100200801,100196422 Gene ID= ENSG00000137992.14 TPM= 3.62 Transcript Type= NA chr1 100263733 100266136 100263733 100266136 - transcript4906.chr1.nic@RTCA-AS1 transcript4906.chr1.nic antisense_RNA 100266004,100265815,100263733 100266136,100265917,100265247 Gene ID= ENSG00000224616.1 TPM= 3.62 Transcript Type= NA chr1 100266166 100292767 100266166 100292767 + transcript4910.chr1.nic@RTCA transcript4910.chr1.nic protein_coding 100266166,100266524,100268074,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403 100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292767 Gene ID= ENSG00000137996.12 TPM= 1.81 Transcript Type= NA chr1 100266218 100292767 100266218 100292767 + transcript4911.chr1.nnic@RTCA transcript4911.chr1.nnic protein_coding 100266218,100266524,100268137,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403 100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292767 Gene ID= ENSG00000137996.12 TPM= 1.81 Transcript Type= NA chr1 100266207 100292769 100266207 100292769 + ENST00000370128.8@RTCA ENST00000370128.8 protein_coding 100266207,100266524,100268152,100270557,100273394,100274824,100275599,100277258,100285228,100287099,100291403 100266420,100266624,100268295,100270680,100273452,100274965,100275723,100277316,100285322,100287203,100292769 Gene ID= ENSG00000137996.12 TPM= 44.37 Transcript Type= protein_coding chr1 100719760 100739045 100719760 100739045 + ENST00000294728.6@VCAM1 ENST00000294728.6 protein_coding 100719760,100720476,100723020,100724624,100729107,100731198,100732418,100734502,100738123 100719924,100720751,100723340,100724890,100729382,100731518,100732684,100734768,100739045 Gene ID= ENSG00000162692.10 TPM= 139.75 Transcript Type= protein_coding chr1 100719755 100739045 100719755 100739045 + ENST00000347652.6@VCAM1 ENST00000347652.6 protein_coding 100719755,100720476,100723020,100724624,100731198,100732418,100734502,100738123 100719924,100720751,100723340,100724890,100731518,100732684,100734768,100739045 Gene ID= ENSG00000162692.10 TPM= 3.92 Transcript Type= protein_coding chr1 100872387 100894845 100872387 100894845 - transcript4924.chr1.nnic@EXTL2 transcript4924.chr1.nnic protein_coding 100894633,100888753,100877476,100876794,100876033,100872387 100894845,100888864,100877903,100876864,100876206,100874430 Gene ID= ENSG00000162694.13 TPM= 1.81 Transcript Type= NA chr1 100872387 100895998 100872387 100895998 - ENST00000370114.7@EXTL2 ENST00000370114.7 protein_coding 100894633,100888753,100877476,100876794,100872387 100895998,100888828,100877903,100876864,100874430 Gene ID= ENSG00000162694.13 TPM= 27.17 Transcript Type= protein_coding chr1 100872387 100894812 100872387 100894812 - ENST00000370113.7@EXTL2 ENST00000370113.7 protein_coding 100894633,100888753,100877476,100876794,100872387 100894812,100888864,100877903,100876864,100874430 Gene ID= ENSG00000162694.13 TPM= 10.87 Transcript Type= protein_coding chr1 100896076 100981753 100896076 100981753 + ENST00000370112.8@SLC30A7 ENST00000370112.8 protein_coding 100896076,100896570,100906852,100911063,100912112,100913663,100918077,100921706,100961828,100965769,100974810,100975219 100896342,100896671,100906965,100911150,100912238,100913806,100918127,100921841,100961918,100965918,100974902,100981753 Gene ID= ENSG00000162695.11 TPM= 79.69 Transcript Type= protein_coding chr1 100989629 101025816 100989629 101025816 - transcript4942.chr1.nic@DPH5 transcript4942.chr1.nic protein_coding 101025683,101025309,101021641,101013710,101001467,100995110,100989629 101025816,101025466,101021765,101013818,101001587,100995149,100990631 Gene ID= ENSG00000117543.20 TPM= 4.53 Transcript Type= NA chr1 101025859 101087261 101025859 101087261 + transcript4951.chr1.nic@AC093157.1 transcript4951.chr1.nic antisense_RNA 101025859,101072660,101075395,101077363,101083461,101086852 101026061,101072830,101075716,101077508,101083574,101087261 Gene ID= ENSG00000233184.6 TPM= 1.81 Transcript Type= NA chr1 101236888 101241518 101236888 101241518 + ENST00000305352.6@S1PR1 ENST00000305352.6 protein_coding 101236888,101238822 101237099,101241518 Gene ID= ENSG00000170989.8 TPM= 21.73 Transcript Type= protein_coding chr1 103561549 103579525 103561549 103579525 + transcript4959.chr1.nic@AMY2B transcript4959.chr1.nic protein_coding 103561549,103565435,103571557,103572110,103573063,103573708,103574260,103575223,103575441,103577490,103577720,103579311 103562094,103565594,103571770,103572256,103573260,103573938,103574393,103575345,103575540,103577608,103577845,103579525 Gene ID= ENSG00000240038.6 TPM= 2.72 Transcript Type= NA chr1 108134827 108200352 108134827 108200352 - transcript4961.chr1.nnic@SLC25A24 transcript4961.chr1.nnic protein_coding 108199956,108185828,108181941,108161182,108157462,108156701,108154983,108148279,108143543,108139058,108134827 108200352,108185954,108182028,108161293,108157620,108156885,108155135,108148386,108143710,108139208,108136837 Gene ID= ENSG00000085491.15 TPM= 4.53 Transcript Type= NA chr1 108560089 108639327 108560089 108639327 + ENST00000370035.7@FAM102B ENST00000370035.7 protein_coding 108560089,108600566,108606223,108612178,108616382,108624645,108628167,108628395,108628677,108629588,108635108 108560565,108600686,108606252,108612294,108616428,108624748,108628262,108628584,108628804,108629657,108639327 Gene ID= ENSG00000162636.15 TPM= 3.62 Transcript Type= protein_coding chr1 108647680 108661520 108647680 108661520 - transcript4968.chr1.nic@HENMT1 transcript4968.chr1.nic protein_coding 108660963,108657451,108655586,108654716,108651030,108650211,108647680 108661520,108657579,108655698,108654850,108651209,108650388,108648991 Gene ID= ENSG00000162639.15 TPM= 1.81 Transcript Type= NA chr1 108692301 108701798 108692301 108701798 + transcript4975.chr1.nnic@PRPF38B transcript4975.chr1.nnic protein_coding 108692301,108695702,108696043,108696277,108698604,108699162 108692867,108695770,108696194,108696351,108698827,108701798 Gene ID= ENSG00000134186.11 TPM= 2.42 Transcript Type= NA chr1 108692323 108701803 108692323 108701803 + ENST00000370025.8@PRPF38B ENST00000370025.8 protein_coding 108692323,108695702,108696043,108696277,108698604,108699162 108692867,108695770,108696194,108696337,108698827,108701803 Gene ID= ENSG00000134186.11 TPM= 30.49 Transcript Type= protein_coding chr1 108746674 108809517 108746674 108809517 + transcript4979.chr1.nnic@STXBP3 transcript4979.chr1.nnic protein_coding 108746674,108752257,108753063,108756690,108758510,108759985,108772665,108776333,108779286,108782422,108782649,108793582,108794827,108796234,108796620,108798145,108800220,108807401,108807622,108808783 108746786,108752306,108753144,108756766,108758588,108760085,108772819,108776423,108779410,108782517,108782706,108793647,108794907,108796372,108796726,108798237,108800305,108807549,108807719,108809517 Gene ID= ENSG00000116266.10 TPM= 1.81 Transcript Type= NA chr1 108746688 108809526 108746688 108809526 + ENST00000370008.3@STXBP3 ENST00000370008.3 protein_coding 108746688,108752257,108753063,108756690,108758510,108759985,108772665,108776333,108779286,108782422,108782649,108793582,108794827,108796234,108796620,108798145,108800220,108807401,108808783 108746786,108752306,108753144,108756766,108758588,108760085,108772819,108776423,108779410,108782517,108782706,108793647,108794907,108796372,108796726,108798237,108800305,108807549,108809526 Gene ID= ENSG00000116266.10 TPM= 64.29 Transcript Type= protein_coding chr1 108876981 108930421 108876981 108930421 + ENST00000264126.7@GPSM2 ENST00000264126.7 protein_coding 108876981,108885275,108896864,108897492,108897959,108898642,108898879,108901790,108903126,108904125,108914338,108918613,108922417,108924000,108929701 108877228,108885578,108897085,108897627,108898101,108898765,108898994,108901945,108903234,108904254,108914408,108918789,108922576,108924214,108930421 Gene ID= ENSG00000121957.12 TPM= 5.66 Transcript Type= protein_coding chr1 108929963 108963486 108929963 108963486 - transcript4993.chr1.nic@CLCC1 transcript4993.chr1.nic protein_coding 108963361,108962309,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929963 108963486,108962469,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501 Gene ID= ENSG00000121940.15 TPM= 5.43 Transcript Type= NA chr1 108929963 108963491 108929963 108963491 - transcript4998.chr1.nnic@CLCC1 transcript4998.chr1.nnic protein_coding 108963361,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929963 108963491,108950438,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501 Gene ID= ENSG00000121940.15 TPM= 4.53 Transcript Type= NA chr1 108929508 108963457 108929508 108963457 - ENST00000356970.6@CLCC1 ENST00000356970.6 protein_coding 108963361,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108934625,108929508 108963457,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942,108932501 Gene ID= ENSG00000121940.15 TPM= 16.07 Transcript Type= protein_coding chr1 108929939 108963462 108929939 108963462 - transcript5005.chr1.nnic@CLCC1 transcript5005.chr1.nnic protein_coding 108963348,108950309,108949820,108947611,108943836,108943475,108941405,108940045,108939636,108937077,108929939 108963462,108950448,108949921,108947718,108944057,108943615,108941498,108940142,108939782,108937418,108934942 Gene ID= ENSG00000121940.15 TPM= 5.43 Transcript Type= NA chr1 108970214 109042113 108970214 109042113 - ENST00000369965.8@WDR47 ENST00000369965.8 protein_coding 109041862,109023355,109017518,109013841,109010916,109004592,109002224,108995580,108991254,108986523,108983282,108982609,108981733,108974536,108970214 109042113,109023521,109017601,109013925,109011718,109004718,109002402,108995837,108991329,108986680,108983451,108982779,108981864,108974754,108971572 Gene ID= ENSG00000085433.15 TPM= 8.15 Transcript Type= protein_coding chr1 109089803 109096934 109089803 109096934 + ENST00000338272.8@TMEM167B ENST00000338272.8 protein_coding 109089803,109092890,109094417 109090882,109093021,109096934 Gene ID= ENSG00000215717.5 TPM= 100.52 Transcript Type= protein_coding chr1 109213918 109238120 109213918 109238120 + ENST00000234677.6@SARS ENST00000234677.6 protein_coding 109213918,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109237244,109237731 109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109237373,109238120 Gene ID= ENSG00000031698.12 TPM= 229.78 Transcript Type= protein_coding chr1 109213982 109238148 109213982 109238148 + ENST00000369923.4@SARS ENST00000369923.4 protein_coding 109213982,109223978,109228352,109229414,109230878,109231631,109235210,109235977,109236391,109236805,109237244,109237731 109214128,109224048,109228432,109229572,109231021,109231786,109235431,109236106,109236548,109236870,109237373,109238148 Gene ID= ENSG00000031698.12 TPM= 2.49 Transcript Type= protein_coding chr1 109309568 109393357 109309568 109393357 - ENST00000538502.5@SORT1 ENST00000538502.5 protein_coding 109393027,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309568 109393357,109369589,109367481,109355469,109354531,109351002,109347532,109345878,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057 Gene ID= ENSG00000134243.11 TPM= 6.79 Transcript Type= protein_coding chr1 109309570 109397951 109309570 109397951 - ENST00000256637.7@SORT1 ENST00000256637.7 protein_coding 109397587,109369530,109367408,109355367,109354367,109350929,109347483,109345751,109342014,109340724,109336240,109327499,109326992,109324899,109322932,109317853,109316850,109314672,109314261,109309570 109397951,109369589,109367481,109355469,109354531,109351002,109347532,109345881,109342158,109340879,109336346,109327601,109327160,109325089,109323121,109317969,109316958,109314778,109314384,109314057 Gene ID= ENSG00000134243.11 TPM= 29.43 Transcript Type= protein_coding chr1 109466542 109482141 109466542 109482141 + transcript5042.chr1.nnic@SYPL2 transcript5042.chr1.nnic protein_coding 109466542,109467059,109475581,109476776,109477818,109479378,109480118 109466897,109467133,109475705,109476977,109478009,109479544,109482141 Gene ID= ENSG00000143028.8 TPM= 3.62 Transcript Type= NA chr1 109466542 109477279 109466542 109477279 + transcript5044.chr1.nic@SYPL2 transcript5044.chr1.nic protein_coding 109466542,109467059,109475581,109476776 109466897,109467133,109475705,109477279 Gene ID= ENSG00000143028.8 TPM= 2.72 Transcript Type= NA chr1 109466628 109482137 109466628 109482137 + ENST00000369872.3@SYPL2 ENST00000369872.3 protein_coding 109466628,109467059,109475581,109476776,109477818,109479378 109466897,109467133,109475705,109476977,109478009,109482137 Gene ID= ENSG00000143028.8 TPM= 4.53 Transcript Type= protein_coding chr1 109483906 109492732 109483906 109492732 + transcript5046.chr1.nic@ATXN7L2 transcript5046.chr1.nic protein_coding 109483906,109486057,109486506,109487007,109487518,109488383,109488847,109489930,109490271,109490922,109492027,109492586 109484080,109486122,109486610,109487217,109487804,109488465,109489100,109490128,109490392,109491717,109492104,109492732 Gene ID= ENSG00000162650.16 TPM= 3.62 Transcript Type= NA chr1 109483906 109492732 109483906 109492732 + transcript5048.chr1.nic@ATXN7L2 transcript5048.chr1.nic protein_coding 109483906,109486057,109486506,109487007,109487518,109488383,109488847,109489930,109490271,109490922,109492586 109484080,109486122,109486610,109487217,109487804,109488465,109489100,109490128,109490392,109491717,109492732 Gene ID= ENSG00000162650.16 TPM= 5.43 Transcript Type= NA chr1 109494099 109500433 109494099 109500433 + ENST00000310611.8@CYB561D1 ENST00000310611.8 protein_coding 109494099,109494520,109495143,109495756 109494287,109494623,109495180,109500433 Gene ID= ENSG00000174151.14 TPM= 6.34 Transcript Type= protein_coding chr1 109504175 109509682 109504175 109509682 - ENST00000369864.4@AMIGO1 ENST00000369864.4 protein_coding 109509420,109504175 109509682,109508999 Gene ID= ENSG00000181754.6 TPM= 39.84 Transcript Type= protein_coding chr1 109619856 109632056 109619856 109632056 + transcript5067.chr1.nic@AMPD2 transcript5067.chr1.nic protein_coding 109619856,109625303,109625662,109626160,109626319,109626726,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943 109620278,109625433,109625792,109626228,109626427,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632056 Gene ID= ENSG00000116337.15 TPM= 4.83 Transcript Type= NA chr1 109619835 109632056 109619835 109632056 + transcript5068.chr1.nic@AMPD2 transcript5068.chr1.nic protein_coding 109619835,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943 109620278,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632056 Gene ID= ENSG00000116337.15 TPM= 7.24 Transcript Type= NA chr1 109619837 109632051 109619837 109632051 + ENST00000342115.8@AMPD2 ENST00000342115.8 protein_coding 109619837,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943 109620278,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051 Gene ID= ENSG00000116337.15 TPM= 61.42 Transcript Type= protein_coding chr1 109620654 109632051 109620654 109632051 + ENST00000256578.7@AMPD2 ENST00000256578.7 protein_coding 109620654,109625303,109625662,109626160,109626319,109626726,109627175,109627429,109627774,109628083,109628364,109628643,109629109,109629327,109629796,109630233,109630683,109630943 109621266,109625433,109625792,109626228,109626427,109626912,109627316,109627518,109627903,109628277,109628495,109628806,109629235,109629490,109629916,109630406,109630793,109632051 Gene ID= ENSG00000116337.15 TPM= 12.52 Transcript Type= protein_coding chr1 109656105 109661699 109656105 109661699 + transcript5077.chr1.nic@GSTM4 transcript5077.chr1.nic protein_coding 109656105,109656712,109657215,109657590,109657772,109658814,109659000,109659790,109661165 109656425,109656787,109657279,109657671,109657872,109658909,109659110,109659959,109661699 Gene ID= ENSG00000168765.16 TPM= 4.98 Transcript Type= NA chr1 109656081 109661700 109656081 109661700 + ENST00000369836.8@GSTM4 ENST00000369836.8 protein_coding 109656081,109656712,109657215,109657590,109657772,109658814,109659000,109661165 109656425,109656787,109657279,109657671,109657872,109658909,109659110,109661700 Gene ID= ENSG00000168765.16 TPM= 77.42 Transcript Type= protein_coding chr1 109656122 109665496 109656122 109665496 + ENST00000326729.9@GSTM4 ENST00000326729.9 protein_coding 109656122,109656712,109657215,109657590,109657772,109658814,109659000,109665011 109656425,109656787,109657279,109657671,109657872,109658909,109659110,109665496 Gene ID= ENSG00000168765.16 TPM= 7.24 Transcript Type= protein_coding chr1 109667997 109675286 109667997 109675286 + transcript5078.chr1.nnic@GSTM2 transcript5078.chr1.nnic protein_coding 109667997,109668425,109668925,109669290,109669471,109670151,109671287,109671473,109674747 109668151,109668500,109668989,109669371,109670063,109670234,109671382,109671583,109675286 Gene ID= ENSG00000213366.12 TPM= 7.24 Transcript Type= NA chr1 109667997 109675286 109667997 109675286 + transcript5079.chr1.nic@GSTM2 transcript5079.chr1.nic protein_coding 109667997,109668425,109668925,109669290,109669471,109670175,109671287,109671473,109674747 109668151,109668500,109668989,109669371,109670063,109670234,109671382,109671583,109675286 Gene ID= ENSG00000213366.12 TPM= 12.68 Transcript Type= NA chr1 109668081 109675286 109668081 109675286 + transcript5086.chr1.nic@GSTM2 transcript5086.chr1.nic protein_coding 109668081,109668425,109668925,109669290,109669471,109671287,109671473,109674747 109668151,109668500,109668989,109669371,109670234,109671382,109671583,109675286 Gene ID= ENSG00000213366.12 TPM= 2.72 Transcript Type= NA chr1 109668066 109675286 109668066 109675286 + ENST00000241337.8@GSTM2 ENST00000241337.8 protein_coding 109668066,109668425,109668925,109669290,109669471,109671287,109671473,109674747 109668151,109668500,109668989,109669371,109669571,109671382,109671583,109675286 Gene ID= ENSG00000213366.12 TPM= 50.71 Transcript Type= protein_coding chr1 109687820 109693745 109687820 109693745 + ENST00000309851.9@GSTM1 ENST00000309851.9 protein_coding 109687820,109688170,109688673,109689048,109689225,109690271,109690454,109693206 109687909,109688245,109688737,109689129,109689325,109690366,109690564,109693745 Gene ID= ENSG00000134184.12 TPM= 469.98 Transcript Type= protein_coding chr1 109687840 109693743 109687840 109693743 + ENST00000349334.7@GSTM1 ENST00000349334.7 protein_coding 109687840,109688170,109688673,109689048,109689225,109690271,109693206 109687909,109688245,109688737,109689129,109689325,109690366,109693743 Gene ID= ENSG00000134184.12 TPM= 13.58 Transcript Type= protein_coding chr1 109712255 109718266 109712255 109718266 + ENST00000256593.7@GSTM5 ENST00000256593.7 protein_coding 109712255,109712618,109713119,109713484,109713661,109714947,109715130,109717337 109712348,109712693,109713183,109713565,109713761,109715042,109715240,109718266 Gene ID= ENSG00000134201.10 TPM= 4.53 Transcript Type= protein_coding chr1 109733932 109740516 109733932 109740516 - ENST00000256594.7@GSTM3 ENST00000256594.7 protein_coding 109740240,109739833,109739429,109738285,109738091,109737656,109737457,109733932 109740516,109739908,109739493,109738366,109738191,109737751,109737567,109737169 Gene ID= ENSG00000134202.10 TPM= 99.61 Transcript Type= protein_coding chr1 109910633 109930992 109910633 109930992 + ENST00000329608.10@CSF1 ENST00000329608.10 protein_coding 109910633,109914259,109915634,109917293,109921847,109923166,109924776,109925147,109928852 109911062,109914381,109915696,109917463,109921994,109924190,109924828,109925202,109930992 Gene ID= ENSG00000184371.13 TPM= 85.12 Transcript Type= protein_coding chr1 110004131 110022389 110004131 110022389 + ENST00000359172.3@AHCYL1 ENST00000359172.3 protein_coding 110004131,110009034,110011214,110012362,110012897,110014763,110015425,110016344,110016667,110017495,110017946,110018373,110018552,110019051,110019548,110020731,110021674 110004451,110009145,110011357,110012462,110012999,110014857,110015531,110016460,110016730,110017583,110018016,110018467,110018650,110019119,110019626,110020851,110022389 Gene ID= ENSG00000168710.17 TPM= 2.11 Transcript Type= protein_coding chr1 110034616 110054641 110034616 110054641 + ENST00000369795.7@STRIP1 ENST00000369795.7 protein_coding 110034616,110037891,110038683,110039172,110039395,110040635,110041536,110041734,110043088,110043639,110044840,110045015,110046680,110047542,110047772,110049112,110049460,110050343,110050956,110051683,110053665 110034817,110037960,110038757,110039306,110039515,110040703,110041642,110041861,110043270,110043856,110044905,110045078,110046751,110047616,110047869,110049238,110049560,110050409,110051060,110051887,110054641 Gene ID= ENSG00000143093.14 TPM= 57.05 Transcript Type= protein_coding chr1 110210727 110234051 110210727 110234051 + transcript5145.chr1.nnic@KCNC4 transcript5145.chr1.nnic protein_coding 110210727,110225975,110232221 110212177,110226178,110234051 Gene ID= ENSG00000116396.14 TPM= 3.62 Transcript Type= NA chr1 110362848 110391082 110362848 110391082 - ENST00000369779.8@SLC16A4 ENST00000369779.8 protein_coding 110390865,110389237,110382834,110381652,110380982,110378853,110376950,110375458,110362848 110391082,110389355,110382966,110381795,110381143,110379356,110377161,110375551,110363893 Gene ID= ENSG00000168679.17 TPM= 3.62 Transcript Type= protein_coding chr1 110362851 110391082 110362851 110391082 - ENST00000541986.5@SLC16A4 ENST00000541986.5 protein_coding 110390865,110389237,110381652,110380982,110378853,110376950,110375458,110362851 110391082,110389355,110381795,110381143,110379356,110377161,110375551,110363893 Gene ID= ENSG00000168679.17 TPM= 3.62 Transcript Type= protein_coding chr1 110451200 110457354 110451200 110457354 + ENST00000271331.3@PROK1 ENST00000271331.3 protein_coding 110451200,110453961,110456232 110451288,110454086,110457354 Gene ID= ENSG00000143125.5 TPM= 5.43 Transcript Type= protein_coding chr1 110873154 110899928 110873154 110899928 + ENST00000271324.5@CD53 ENST00000271324.5 protein_coding 110873154,110891392,110892345,110894327,110894960,110896653,110897809,110899124 110873248,110891471,110892533,110894401,110895055,110896733,110897892,110899928 Gene ID= ENSG00000143119.12 TPM= 30.79 Transcript Type= protein_coding chr1 110947222 110963965 110947222 110963965 - ENST00000485275.2@LRIF1 ENST00000485275.2 protein_coding 110963621,110949851,110947222 110963965,110950123,110948399 Gene ID= ENSG00000121931.15 TPM= 8.15 Transcript Type= protein_coding chr1 111117335 111140179 111117335 111140179 - transcript5179.chr1.nic@DRAM2 transcript5179.chr1.nic protein_coding 111140038,111139501,111137523,111131424,111126227,111122616,111120516,111119877,111118805,111117335 111140179,111139666,111137586,111131568,111126294,111122643,111120693,111119959,111118897,111118267 Gene ID= ENSG00000156171.14 TPM= 2.72 Transcript Type= NA chr1 111115927 111140475 111115927 111140475 - transcript5181.chr1.nic@DRAM2 transcript5181.chr1.nic protein_coding 111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111115927 111140475,111139666,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267 Gene ID= ENSG00000156171.14 TPM= 27.62 Transcript Type= NA chr1 111115927 111140189 111115927 111140189 - transcript5182.chr1.nic@DRAM2 transcript5182.chr1.nic protein_coding 111140038,111139501,111137523,111131424,111126227,111124742,111120516,111119877,111118805,111115927 111140189,111139711,111137586,111131568,111126294,111124881,111120693,111119959,111118897,111118267 Gene ID= ENSG00000156171.14 TPM= 16.75 Transcript Type= NA chr1 111140226 111185102 111140226 111185102 + ENST00000357172.8@CEPT1 ENST00000357172.8 protein_coding 111140226,111147642,111159380,111161155,111174879,111182187,111182799,111183462,111184191 111140307,111148053,111159527,111161296,111174963,111182318,111182957,111183587,111185102 Gene ID= ENSG00000134255.13 TPM= 14.49 Transcript Type= protein_coding chr1 111186677 111204584 111186677 111204584 - transcript5170.chr1.nnic@DENND2D transcript5170.chr1.nnic protein_coding 111204296,111199623,111198630,111197706,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111186677 111204584,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681 Gene ID= ENSG00000162777.16 TPM= 2.47 Transcript Type= NA chr1 111186677 111204558 111186677 111204558 - transcript5174.chr1.nic@DENND2D transcript5174.chr1.nic protein_coding 111204146,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111186677 111204558,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681 Gene ID= ENSG00000162777.16 TPM= 2.47 Transcript Type= NA chr1 111185049 111204590 111185049 111204590 - transcript5176.chr1.nnic@DENND2D transcript5176.chr1.nnic protein_coding 111204490,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111185049 111204590,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681 Gene ID= ENSG00000162777.16 TPM= 6.09 Transcript Type= NA chr1 111187174 111204409 111187174 111204409 - ENST00000369752.5@DENND2D ENST00000369752.5 protein_coding 111204296,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174 111204409,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681 Gene ID= ENSG00000162777.16 TPM= 11.68 Transcript Type= protein_coding chr1 111187174 111200689 111187174 111200689 - ENST00000357640.8@DENND2D ENST00000357640.8 protein_coding 111200393,111199623,111198630,111197920,111197176,111195916,111194578,111192140,111189212,111188702,111188131,111187174 111200689,111199798,111198742,111197989,111197253,111196056,111194726,111192317,111189253,111188786,111188370,111187681 Gene ID= ENSG00000162777.16 TPM= 2.63 Transcript Type= protein_coding chr1 111346288 111353013 111346288 111353013 + ENST00000369738.8@PIFO ENST00000369738.8 protein_coding 111346288,111346910,111347674,111348516,111350106,111351259 111346671,111347049,111347772,111348646,111350223,111353013 Gene ID= ENSG00000173947.13 TPM= 1.81 Transcript Type= protein_coding chr1 111346607 111353017 111346607 111353017 + transcript5198.chr1.nnic@PIFO transcript5198.chr1.nnic protein_coding 111346607,111347674,111348516,111350106,111351259 111346671,111347772,111348646,111350223,111353017 Gene ID= ENSG00000173947.13 TPM= 1.81 Transcript Type= NA chr1 111440276 111449234 111440276 111449234 - transcript5202.chr1.nnic@WDR77 transcript5202.chr1.nnic protein_coding 111449055,111448619,111447435,111447095,111444054,111443867,111443667,111443323,111442653,111442025,111440276 111449234,111448804,111447576,111447144,111444124,111443921,111443725,111443394,111442761,111442093,111441389 Gene ID= ENSG00000116455.13 TPM= 3.32 Transcript Type= NA chr1 111440266 111449320 111440266 111449320 - transcript5203.chr1.nic@WDR77 transcript5203.chr1.nic protein_coding 111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111441499,111440266 111449320,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441604,111441389 Gene ID= ENSG00000116455.13 TPM= 8.76 Transcript Type= NA chr1 111440609 111449320 111440609 111449320 - transcript5204.chr1.nnic@WDR77 transcript5204.chr1.nnic protein_coding 111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111442025,111441211,111440609 111449320,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093,111441389,111440770 Gene ID= ENSG00000116455.13 TPM= 3.62 Transcript Type= NA chr1 111440266 111449255 111440266 111449255 - transcript5208.chr1.nic@WDR77 transcript5208.chr1.nic protein_coding 111449055,111448619,111447435,111447095,111444054,111443867,111443323,111442653,111440266 111449255,111448804,111447576,111447144,111444124,111443921,111443394,111442761,111442093 Gene ID= ENSG00000116455.13 TPM= 5.13 Transcript Type= NA chr1 111448936 111462773 111448936 111462773 + ENST00000369722.7@ATP5F1 ENST00000369722.7 protein_coding 111448936,111449837,111454211,111456086,111456630,111459457,111460917 111449581,111449873,111454356,111456249,111456755,111459636,111462773 Gene ID= ENSG00000116459.10 TPM= 204.95 Transcript Type= protein_coding chr1 111449465 111461332 111449465 111461332 + ENST00000369721.8@ATP5F1 ENST00000369721.8 protein_coding 111449465,111449837,111456086,111456630,111459457,111460917 111449581,111449873,111456249,111456755,111459636,111461332 Gene ID= ENSG00000116459.10 TPM= 3.17 Transcript Type= processed_transcript chr1 111473792 111478512 111473792 111478512 + ENST00000343534.9@C1orf162 ENST00000343534.9 protein_coding 111473792,111476018,111476798,111477334,111477651,111477983 111474030,111476065,111476867,111477428,111477775,111478512 Gene ID= ENSG00000143110.11 TPM= 1.2 Transcript Type= protein_coding chr1 111473946 111478509 111473946 111478509 + transcript5223.chr1.nnic@C1orf162 transcript5223.chr1.nnic protein_coding 111473946,111476018,111476798,111477334,111477983 111474030,111476065,111476867,111477428,111478509 Gene ID= ENSG00000143110.11 TPM= 3.02 Transcript Type= NA chr1 111473869 111478472 111473869 111478472 + ENST00000369718.3@C1orf162 ENST00000369718.3 protein_coding 111473869,111476018,111476798,111477334,111477726,111477983 111474030,111476065,111476867,111477428,111477775,111478472 Gene ID= ENSG00000143110.11 TPM= 9.35 Transcript Type= protein_coding chr1 111499429 111503760 111499429 111503760 - ENST00000241356.4@ADORA3 ENST00000241356.4 protein_coding 111503005,111499429 111503760,111500556 Gene ID= ENSG00000282608.1 TPM= 13.58 Transcript Type= protein_coding chr1 111619793 111714185 111619793 111714185 + transcript5237.chr1.nic@RAP1A transcript5237.chr1.nic protein_coding 111619793,111627470,111691334,111695341,111697441,111703336,111704343,111709149,111712431 111619934,111627563,111691417,111695409,111697497,111703476,111704486,111709264,111714185 Gene ID= ENSG00000116473.14 TPM= 4.23 Transcript Type= NA chr1 111619741 111716688 111619741 111716688 + transcript5241.chr1.nnic@RAP1A transcript5241.chr1.nnic protein_coding 111619741,111691334,111695341,111697441,111703336,111704343,111709149,111712431 111619934,111691364,111695409,111697497,111703476,111704486,111709264,111716688 Gene ID= ENSG00000116473.14 TPM= 1.81 Transcript Type= NA chr1 111619969 111713113 111619969 111713113 + transcript5245.chr1.nnic@RAP1A transcript5245.chr1.nnic protein_coding 111619969,111691334,111695341,111697441,111703336,111704343,111709149,111712431 111620347,111691417,111695409,111697497,111703476,111704486,111709264,111713113 Gene ID= ENSG00000116473.14 TPM= 2.42 Transcript Type= NA chr1 111619783 111716691 111619783 111716691 + ENST00000369709.3@RAP1A ENST00000369709.3 protein_coding 111619783,111691334,111695341,111697441,111703336,111704343,111709149,111712431 111619934,111691417,111695409,111697497,111703476,111704486,111709264,111716691 Gene ID= ENSG00000116473.14 TPM= 51.32 Transcript Type= protein_coding chr1 111755305 111768016 111755305 111768016 + ENST00000369702.4@DDX20 ENST00000369702.4 protein_coding 111755305,111756646,111759400,111760474,111760706,111760987,111761226,111762255,111762677,111762906,111765737 111756225,111756740,111759568,111760588,111760848,111761125,111761284,111762337,111762782,111763007,111768016 Gene ID= ENSG00000064703.11 TPM= 12.68 Transcript Type= protein_coding chr1 112396181 112461164 112396181 112461164 + ENST00000271277.10@CTTNBP2NL ENST00000271277.10 protein_coding 112396181,112412194,112416157,112448942,112454449,112455931 112396272,112412317,112416264,112449172,112454556,112461164 Gene ID= ENSG00000143079.14 TPM= 9.96 Transcript Type= protein_coding chr1 112523518 112619418 112523518 112619418 - ENST00000358039.8@ST7L ENST00000358039.8 protein_coding 112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112550601,112541951,112523518 112619418,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112550693,112542090,112526111 Gene ID= ENSG00000007341.18 TPM= 7.7 Transcript Type= protein_coding chr1 112523518 112619189 112523518 112619189 - ENST00000360743.8@ST7L ENST00000360743.8 protein_coding 112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112541951,112523518 112619189,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112542090,112526111 Gene ID= ENSG00000007341.18 TPM= 3.17 Transcript Type= protein_coding chr1 112541790 112619189 112541790 112619189 - ENST00000343210.11@ST7L ENST00000343210.11 protein_coding 112618909,112616813,112610841,112600794,112597971,112591525,112583972,112582375,112581992,112578345,112576986,112555868,112550601,112541790 112619189,112616895,112611003,112600848,112598086,112591603,112584126,112582472,112582106,112578417,112577088,112556018,112550693,112542090 Gene ID= ENSG00000007341.18 TPM= 1.81 Transcript Type= protein_coding chr1 112610459 112619774 112610459 112619774 - ENST00000467335.5@ST7L ENST00000467335.5 protein_coding 112619644,112618909,112616813,112610459 112619774,112619139,112616895,112611003 Gene ID= ENSG00000007341.18 TPM= 14.49 Transcript Type= processed_transcript chr1 112610455 112619111 112610455 112619111 - ENST00000470683.1@ST7L ENST00000470683.1 protein_coding 112618909,112610455 112619111,112611003 Gene ID= ENSG00000007341.18 TPM= 1.81 Transcript Type= processed_transcript chr1 112619173 112671619 112619173 112671619 + ENST00000263168.3@CAPZA1 ENST00000263168.3 protein_coding 112619173,112647210,112649418,112653598,112654465,112659022,112659701,112667074,112669543,112669992 112619883,112647273,112649469,112653661,112654671,112659101,112659779,112667145,112669605,112671619 Gene ID= ENSG00000116489.12 TPM= 111.38 Transcript Type= protein_coding chr1 112674702 112702390 112674702 112702390 + transcript5276.chr1.nnic@MOV10 transcript5276.chr1.nnic protein_coding 112674702,112674848,112675023,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416 112674729,112674882,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112702390 Gene ID= ENSG00000155363.18 TPM= 9.58 Transcript Type= NA chr1 112674421 112700746 112674421 112700746 + ENST00000413052.6@MOV10 ENST00000413052.6 protein_coding 112674421,112674832,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416 112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700746 Gene ID= ENSG00000155363.18 TPM= 37.35 Transcript Type= protein_coding chr1 112674487 112700739 112674487 112700739 + ENST00000369645.5@MOV10 ENST00000369645.5 protein_coding 112674487,112674848,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416 112674729,112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700739 Gene ID= ENSG00000155363.18 TPM= 69.95 Transcript Type= protein_coding chr1 112674745 112700710 112674745 112700710 + ENST00000357443.2@MOV10 ENST00000357443.2 protein_coding 112674745,112688935,112689415,112689840,112691665,112692761,112694018,112694453,112694749,112695416,112696148,112696437,112696630,112697994,112698287,112698715,112699685,112699894,112700219,112700416 112675049,112689138,112689650,112690098,112691799,112692929,112694172,112694629,112694896,112695574,112696251,112696534,112696846,112698111,112698478,112698789,112699810,112699982,112700340,112700710 Gene ID= ENSG00000155363.18 TPM= 10.57 Transcript Type= protein_coding chr1 112701106 112707403 112701106 112707403 - ENST00000339083.11@RHOC ENST00000339083.11 protein_coding 112707078,112705100,112703644,112702999,112702563,112701106 112707403,112705168,112703806,112703119,112702693,112701713 Gene ID= ENSG00000155366.16 TPM= 187.75 Transcript Type= protein_coding chr1 112701131 112707434 112701131 112707434 - ENST00000369642.7@RHOC ENST00000369642.7 protein_coding 112707078,112703644,112702999,112702563,112701131 112707434,112703806,112703119,112702693,112701713 Gene ID= ENSG00000155366.16 TPM= 107.15 Transcript Type= protein_coding chr1 112703493 112707114 112703493 112707114 - ENST00000478447.1@RHOC ENST00000478447.1 protein_coding 112707078,112705100,112703493 112707114,112705168,112703806 Gene ID= ENSG00000155366.16 TPM= 1.81 Transcript Type= retained_intron chr1 112709994 112715477 112709994 112715477 - ENST00000309276.10@PPM1J ENST00000309276.10 protein_coding 112714976,112713497,112712744,112712345,112711971,112711266,112711008,112710744,112710460,112709994 112715477,112713611,112713031,112712457,112712055,112711384,112711071,112710851,112710611,112710310 Gene ID= ENSG00000155367.15 TPM= 3.62 Transcript Type= protein_coding chr1 112911847 112956353 112911847 112956353 - ENST00000369626.7@SLC16A1 ENST00000369626.7 protein_coding 112956035,112929092,112921990,112917178,112911847 112956353,112929352,112922133,112918044,112914165 Gene ID= ENSG00000155380.11 TPM= 25.36 Transcript Type= protein_coding chr1 113697202 113759590 113697202 113759590 - transcript5325.chr1.nnic@PHTF1 transcript5325.chr1.nnic protein_coding 113759023,113758659,113757699,113749506,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697202 113759590,113758848,113757755,113749589,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725 Gene ID= ENSG00000116793.15 TPM= 3.02 Transcript Type= NA chr1 113697202 113759526 113697202 113759526 - transcript5327.chr1.nnic@PHTF1 transcript5327.chr1.nnic protein_coding 113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113698992,113698262,113697202 113759526,113758848,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113700243,113698387,113697725 Gene ID= ENSG00000116793.15 TPM= 1.81 Transcript Type= NA chr1 113697202 113759556 113697202 113759556 - transcript5328.chr1.nnic@PHTF1 transcript5328.chr1.nnic protein_coding 113758659,113757699,113749506,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697202 113759556,113757755,113749589,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725 Gene ID= ENSG00000116793.15 TPM= 3.02 Transcript Type= NA chr1 113697202 113759525 113697202 113759525 - transcript5330.chr1.nic@PHTF1 transcript5330.chr1.nic protein_coding 113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697202 113759525,113758848,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725 Gene ID= ENSG00000116793.15 TPM= 3.02 Transcript Type= NA chr1 113697202 113759450 113697202 113759450 - transcript5331.chr1.nnic@PHTF1 transcript5331.chr1.nnic protein_coding 113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113698992,113698262,113697202 113759450,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113700243,113698387,113697725 Gene ID= ENSG00000116793.15 TPM= 2.72 Transcript Type= NA chr1 113700267 113759473 113700267 113759473 - transcript5336.chr1.nic@PHTF1 transcript5336.chr1.nic protein_coding 113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700267 113759473,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949 Gene ID= ENSG00000116793.15 TPM= 2.72 Transcript Type= NA chr1 113705766 113759484 113705766 113759484 - transcript5341.chr1.nic@PHTF1 transcript5341.chr1.nic protein_coding 113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705766 113759484,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162 Gene ID= ENSG00000116793.15 TPM= 2.72 Transcript Type= NA chr1 113705766 113759556 113705766 113759556 - transcript5343.chr1.nic@PHTF1 transcript5343.chr1.nic protein_coding 113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705766 113759556,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162 Gene ID= ENSG00000116793.15 TPM= 3.62 Transcript Type= NA chr1 113725336 113759472 113725336 113759472 - transcript5344.chr1.nic@PHTF1 transcript5344.chr1.nic protein_coding 113759023,113758659,113757699,113738730,113738110,113726418,113725336 113759472,113758733,113757755,113738799,113738268,113726574,113725961 Gene ID= ENSG00000116793.15 TPM= 1.81 Transcript Type= NA chr1 113697205 113759476 113697205 113759476 - ENST00000369604.5@PHTF1 ENST00000369604.5 protein_coding 113759023,113758659,113757699,113738730,113738110,113726418,113724759,113713279,113711940,113711746,113710254,113706594,113705890,113704666,113704081,113700794,113699704,113698262,113697205 113759476,113758733,113757755,113738799,113738268,113726574,113724893,113713438,113712113,113711835,113710475,113706722,113706162,113704797,113704167,113700949,113699799,113698387,113697725 Gene ID= ENSG00000116793.15 TPM= 7.24 Transcript Type= protein_coding chr1 113894748 113904998 113894748 113904998 - ENST00000369569.5@AP4B1 ENST00000369569.5 protein_coding 113904605,113902638,113901755,113901236,113899904,113898718,113897840,113896258,113895757,113894748 113904998,113902862,113901885,113901383,113900400,113898801,113897943,113896465,113896038,113895492 Gene ID= ENSG00000134262.12 TPM= 9.96 Transcript Type= protein_coding chr1 113905141 113914086 113905141 113914086 + ENST00000369563.3@DCLRE1B ENST00000369563.3 protein_coding 113905141,113906996,113908009,113911131 113905775,113907161,113908191,113914086 Gene ID= ENSG00000118655.4 TPM= 7.24 Transcript Type= protein_coding chr1 113979443 113982254 113979443 113982254 + ENST00000320334.4@OLFML3 ENST00000320334.4 protein_coding 113979443,113980332,113980949 113979630,113980617,113982254 Gene ID= ENSG00000116774.11 TPM= 67.92 Transcript Type= protein_coding chr1 114397621 114511231 114397621 114511231 - transcript5360.chr1.nic@TRIM33 transcript5360.chr1.nic protein_coding 114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114420380,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397940,114397621 114511231,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114420451,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397990,114397860 Gene ID= ENSG00000197323.11 TPM= 2.72 Transcript Type= NA chr1 114397608 114511160 114397608 114511160 - ENST00000369543.6@TRIM33 ENST00000369543.6 protein_coding 114510551,114464270,114463412,114463104,114433617,114430798,114427748,114427177,114425449,114424591,114421436,114410184,114408677,114406941,114405410,114402760,114401389,114399457,114397608 114511160,114464388,114463556,114463236,114433733,114430912,114427894,114427294,114425723,114424755,114421636,114410316,114408740,114407100,114405759,114402883,114401463,114399609,114397860 Gene ID= ENSG00000197323.11 TPM= 9.96 Transcript Type= protein_coding chr1 114567557 114581639 114567557 114581639 - ENST00000369541.3@BCAS2 ENST00000369541.3 protein_coding 114581499,114581299,114576688,114575590,114570700,114569992,114567557 114581639,114581391,114576758,114575751,114570750,114570072,114568256 Gene ID= ENSG00000116752.5 TPM= 24.45 Transcript Type= protein_coding chr1 114704469 114716894 114704469 114716894 - ENST00000369535.4@NRAS ENST00000369535.4 protein_coding 114716658,114716050,114713800,114709569,114708531,114708154,114704469 114716894,114716177,114713978,114709728,114708654,114708192,114708050 Gene ID= ENSG00000213281.4 TPM= 20.83 Transcript Type= protein_coding chr1 114716913 114757983 114716913 114757983 - ENST00000339438.10@CSDE1 ENST00000339438.10 protein_coding 114757925,114749821,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716913 114757983,114750207,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216 Gene ID= ENSG00000009307.15 TPM= 431.25 Transcript Type= protein_coding chr1 114716917 114757964 114716917 114757964 - ENST00000358528.8@CSDE1 ENST00000358528.8 protein_coding 114757925,114749821,114739692,114737963,114737471,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114716917 114757964,114750207,114739890,114738072,114737563,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216 Gene ID= ENSG00000009307.15 TPM= 39.83 Transcript Type= protein_coding chr1 114717305 114758027 114717305 114758027 - ENST00000530886.5@CSDE1 ENST00000530886.5 protein_coding 114757925,114749821,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717305 114758027,114750207,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216 Gene ID= ENSG00000009307.15 TPM= 2.4 Transcript Type= protein_coding chr1 114717295 114757974 114717295 114757974 - ENST00000261443.9@CSDE1 ENST00000261443.9 protein_coding 114757925,114739692,114737963,114736758,114734442,114733989,114733732,114732604,114730508,114730258,114726983,114726211,114725221,114723883,114720539,114719579,114718613,114717295 114757974,114739890,114738072,114736855,114734523,114734117,114733857,114732816,114730648,114730422,114727090,114726386,114725333,114724002,114720717,114719742,114718745,114718216 Gene ID= ENSG00000009307.15 TPM= 3.69 Transcript Type= protein_coding chr1 114769479 114780685 114769479 114780685 - ENST00000369528.9@SIKE1 ENST00000369528.9 protein_coding 114780437,114780110,114779142,114776346,114769479 114780685,114780215,114779284,114776459,114774372 Gene ID= ENSG00000052723.11 TPM= 2.72 Transcript Type= protein_coding chr1 114772775 114780677 114772775 114780677 - ENST00000060969.5@SIKE1 ENST00000060969.5 protein_coding 114780449,114780110,114779142,114776346,114772775 114780677,114780215,114779284,114776459,114774372 Gene ID= ENSG00000052723.11 TPM= 2.72 Transcript Type= protein_coding chr1 115925826 115931578 115925826 115931578 + transcript5393.chr1.nnic@LINC01649 transcript5393.chr1.nnic lincRNA 115925826,115930888,115931315 115925982,115930983,115931578 Gene ID= ENSG00000228127.2 TPM= 6.34 Transcript Type= NA chr1 116373867 116404772 116373867 116404772 + ENST00000537345.5@ATP1A1 ENST00000537345.5 protein_coding 116373867,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416 116374241,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404772 Gene ID= ENSG00000163399.15 TPM= 17.43 Transcript Type= protein_coding chr1 116373260 116404774 116373260 116404774 + ENST00000295598.9@ATP1A1 ENST00000295598.9 protein_coding 116373260,116384014,116384783,116387288,116388131,116388638,116388902,116389439,116390213,116390782,116392854,116393531,116395110,116396598,116397888,116398621,116398930,116399420,116400861,116401130,116401554,116403884,116404416 116373523,116384124,116384842,116387491,116388244,116388772,116389019,116389707,116390411,116390891,116392988,116393723,116395285,116396734,116398038,116398789,116399084,116399543,116401006,116401260,116401655,116403975,116404774 Gene ID= ENSG00000163399.15 TPM= 258.31 Transcript Type= protein_coding chr1 116514535 116571039 116514535 116571039 - ENST00000369489.9@CD58 ENST00000369489.9 protein_coding 116570903,116544311,116535965,116521906,116519231,116514535 116571039,116544604,116536228,116521983,116519267,116514822 Gene ID= ENSG00000116815.15 TPM= 9.06 Transcript Type= protein_coding chr1 116521787 116571039 116521787 116571039 - ENST00000369487.3@CD58 ENST00000369487.3 protein_coding 116570903,116544311,116535965,116521787 116571039,116544604,116536228,116521983 Gene ID= ENSG00000116815.15 TPM= 1.81 Transcript Type= protein_coding chr1 116754385 116769228 116754385 116769228 + ENST00000369478.3@CD2 ENST00000369478.3 protein_coding 116754385,116754631,116760402,116764484,116768464 116754553,116754951,116760632,116764606,116769228 Gene ID= ENSG00000116824.4 TPM= 1.81 Transcript Type= protein_coding chr1 116909890 116968370 116909890 116968370 + transcript5419.chr1.nic@PTGFRN transcript5419.chr1.nic protein_coding 116909890,116941715,116944679,116949192,116961243,116966911 116910252,116942083,116945092,116949572,116961668,116968370 Gene ID= ENSG00000134247.9 TPM= 4.53 Transcript Type= NA chr1 116910057 116990358 116910057 116990358 + ENST00000393203.2@PTGFRN ENST00000393203.2 protein_coding 116910057,116941715,116944679,116949192,116961243,116966911,116974216,116984680,116986801 116910252,116942083,116945092,116949572,116961668,116967330,116974323,116984985,116990358 Gene ID= ENSG00000134247.9 TPM= 72.44 Transcript Type= protein_coding chr1 117060315 117102865 117060315 117102865 + transcript5422.chr1.nic@TTF2 transcript5422.chr1.nic protein_coding 117060315,117060455,117062387,117073661,117074870,117076180,117076641,117077916,117079568,117081828,117084018,117086417,117088801,117090055,117090532,117091328,117091817,117092731,117095309,117096149,117097351,117098833,117101380,117102194 117060374,117060557,117062473,117073727,117075859,117076294,117076823,117078043,117079649,117081947,117084168,117086522,117088982,117090208,117090623,117091410,117091950,117092901,117095367,117096299,117097433,117098907,117101562,117102865 Gene ID= ENSG00000116830.11 TPM= 2.72 Transcript Type= NA chr1 117060315 117102601 117060315 117102601 + transcript5423.chr1.nnic@TTF2 transcript5423.chr1.nnic protein_coding 117060315,117060455,117062387,117073661,117074870,117076180,117076641,117077916,117079568,117081828,117084018,117086417,117088801,117090055,117090532,117091328,117091817,117092731,117095309,117096149,117097351,117098833,117101380,117102267 117060374,117060557,117062473,117073727,117075859,117076294,117076823,117078043,117079649,117081947,117084168,117086522,117088982,117090208,117090623,117091410,117091950,117092901,117095367,117096299,117097433,117098907,117101562,117102601 Gene ID= ENSG00000116830.11 TPM= 1.81 Transcript Type= NA chr1 117060303 117107453 117060303 117107453 + ENST00000369466.8@TTF2 ENST00000369466.8 protein_coding 117060303,117060455,117062387,117073661,117074870,117076180,117076641,117077916,117079568,117081828,117084018,117086417,117088801,117090055,117090532,117091328,117091817,117092731,117095309,117096149,117097351,117098833,117101380 117060374,117060557,117062473,117073727,117075859,117076294,117076823,117078043,117079649,117081947,117084168,117086522,117088982,117090208,117090623,117091410,117091950,117092901,117095367,117096299,117097433,117098907,117107453 Gene ID= ENSG00000116830.11 TPM= 4.53 Transcript Type= protein_coding chr1 117111054 117121791 117111054 117121791 - transcript5426.chr1.nic@TRIM45 transcript5426.chr1.nic protein_coding 117120714,117118034,117116616,117115575,117113359,117112095,117111054 117121791,117118767,117116745,117115689,117113485,117112453,117111212 Gene ID= ENSG00000134253.9 TPM= 4.98 Transcript Type= NA chr1 117111060 117121728 117111060 117121728 - ENST00000256649.8@TRIM45 ENST00000256649.8 protein_coding 117120714,117118034,117116616,117115575,117113359,117111060 117121728,117118767,117116745,117115689,117113485,117112453 Gene ID= ENSG00000134253.9 TPM= 6.79 Transcript Type= protein_coding chr1 117367449 117528872 117367449 117528872 + ENST00000356554.7@MAN1A2 ENST00000356554.7 protein_coding 117367449,117402186,117405549,117414713,117420569,117442231,117460489,117466334,117493147,117496763,117499382,117502855,117522825 117368485,117402441,117405645,117414831,117420649,117442325,117460612,117466427,117493262,117496982,117499554,117502970,117528872 Gene ID= ENSG00000198162.12 TPM= 7.24 Transcript Type= protein_coding chr1 117605934 117628372 117605934 117628372 + ENST00000369448.3@FAM46C ENST00000369448.3 protein_coding 117605934,117622842 117606153,117628372 Gene ID= ENSG00000183508.4 TPM= 5.43 Transcript Type= protein_coding chr1 117863485 117929630 117863485 117929630 - ENST00000369443.9@GDAP2 ENST00000369443.9 protein_coding 117929448,117920182,117918597,117912530,117911994,117906506,117899057,117896833,117887698,117886577,117883488,117881823,117878009,117863485 117929630,117920424,117918736,117912683,117912082,117906582,117899216,117896989,117887774,117886653,117883627,117881877,117878152,117870616 Gene ID= ENSG00000196505.10 TPM= 9.96 Transcript Type= protein_coding chr1 117929763 117960885 117929763 117960885 + transcript5436.chr1.nic@WDR3 transcript5436.chr1.nic protein_coding 117929763,117933288,117934473,117936769,117938480,117939477,117940827,117941124,117941750,117942437,117943396,117946086,117948405,117949751,117949995,117950834,117951976,117952297,117952528,117952946,117953476,117954007,117954580,117955315,117957068,117958910,117959292 117929924,117933490,117934682,117936887,117938558,117939572,117940940,117941225,117941847,117942544,117943626,117946179,117948506,117949836,117950130,117950890,117952076,117952408,117952662,117952996,117953541,117954099,117954627,117955358,117957196,117959003,117960885 Gene ID= ENSG00000065183.15 TPM= 27.17 Transcript Type= NA chr1 119031218 119140792 119031218 119140792 - transcript5441.chr1.nnic@WARS2 transcript5441.chr1.nnic protein_coding 119140555,119076521,119045582,119042264,119034095,119031218 119140792,119076607,119045662,119042349,119034213,119033359 Gene ID= ENSG00000116874.11 TPM= 3.02 Transcript Type= NA chr1 119031221 119140671 119031221 119140671 - ENST00000235521.4@WARS2 ENST00000235521.4 protein_coding 119140555,119076350,119045582,119042264,119034095,119031221 119140671,119076607,119045662,119042349,119034213,119033359 Gene ID= ENSG00000116874.11 TPM= 26.56 Transcript Type= protein_coding chr1 119031216 119140648 119031216 119140648 - ENST00000369426.9@WARS2 ENST00000369426.9 protein_coding 119140555,119076350,119045582,119042264,119034095,119031216 119140648,119076607,119045662,119042349,119034213,119033388 Gene ID= ENSG00000116874.11 TPM= 3.92 Transcript Type= protein_coding chr1 119415084 119423034 119415084 119423034 + ENST00000369416.3@HSD3B2 ENST00000369416.3 protein_coding 119415084,119415331,119419418,119421809 119415202,119415561,119419582,119423034 Gene ID= ENSG00000203859.9 TPM= 9872.77 Transcript Type= protein_coding chr1 119415151 119419892 119415151 119419892 + ENST00000471656.5@HSD3B2 ENST00000471656.5 protein_coding 119415151,119415331,119419418 119415202,119415561,119419892 Gene ID= ENSG00000203859.9 TPM= 5.5 Transcript Type= processed_transcript chr1 119415120 119446504 119415120 119446504 + transcript5500.chr1.nnic@HSD3BP2 transcript5500.chr1.nnic unprocessed_pseudogene 119415120,119415331,119419418,119442878 119415202,119415561,119419582,119446504 Gene ID= ENSG00000203858.3 TPM= 68.82 Transcript Type= NA chr1 119711715 119744226 119711715 119744226 + ENST00000641023.1@PHGDH ENST00000641023.1 protein_coding 119711715,119721170,119723376,119726851,119727004,119734634,119735295,119737114,119740386,119741767,119742807,119743886 119712160,119721321,119723441,119726905,119727102,119734766,119735443,119737266,119740518,119741897,119743044,119744226 Gene ID= ENSG00000092621.12 TPM= 5.43 Transcript Type= protein_coding chr1 120155205 120176533 120155205 120176533 - transcript5511.chr1.nnic@SEC22B transcript5511.chr1.nnic protein_coding 120176307,120163210,120160384,120155205 120176533,120163370,120160530,120157192 Gene ID= ENSG00000265808.3 TPM= 86.03 Transcript Type= NA chr1 121087352 121096310 121087352 121096310 + ENST00000369384.8@FCGR1B ENST00000369384.8 protein_coding 121087352,121087821,121088654,121092996,121095872 121087425,121087841,121088908,121093250,121096310 Gene ID= ENSG00000198019.12 TPM= 3.62 Transcript Type= protein_coding chr1 121167646 121184340 121167646 121184340 - ENST00000369390.7@FAM72B ENST00000369390.7 protein_coding 121183338,121181271,121177208,121167646 121184340,121181348,121177332,121168835 Gene ID= ENSG00000188610.12 TPM= 3.62 Transcript Type= protein_coding chr1 121184810 121392822 121184810 121392822 + ENST00000367123.7@SRGAP2C ENST00000367123.7 protein_coding 121184810,121186905,121284803,121324478,121365293,121373971,121374826,121382701,121386506,121387634 121185124,121187513,121284995,121324640,121365355,121374186,121374954,121382925,121386607,121392822 Gene ID= ENSG00000171943.11 TPM= 28.98 Transcript Type= protein_coding chr1 143972664 144048525 143972664 144048525 + transcript5540.chr1.nnic@SRGAP2D transcript5540.chr1.nnic unprocessed_pseudogene 143972664,143974544,144045747 143972766,143975153,144048525 Gene ID= ENSG00000270872.2 TPM= 2.72 Transcript Type= NA chr1 144227030 144250288 144227030 144250288 - ENST00000452399.5@AC245595.1 ENST00000452399.5 lincRNA 144250225,144245686,144227030 144250288,144245820,144227379 Gene ID= ENSG00000232527.7 TPM= 2.72 Transcript Type= lincRNA chr1 144421491 144461662 144421491 144461662 - transcript5551.chr1.nnic@NBPF15 transcript5551.chr1.nnic protein_coding 144461381,144459366,144456537,144450772,144448775,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429700,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421491 144461662,144459464,144456805,144450802,144448916,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256 Gene ID= ENSG00000266338.6 TPM= 5.43 Transcript Type= NA chr1 144421491 144461637 144421491 144461637 - transcript5554.chr1.nic@NBPF15 transcript5554.chr1.nic protein_coding 144461381,144456537,144450772,144448775,144440141,144439829,144437945,144436895,144435781,144435111,144433773,144429700,144428606,144427818,144427047,144426278,144425517,144424690,144423870,144421491 144461637,144456805,144450870,144448916,144440295,144440038,144438047,144437109,144435853,144435316,144433824,144429863,144428657,144427990,144427098,144426450,144425568,144424862,144423975,144423256 Gene ID= ENSG00000266338.6 TPM= 5.43 Transcript Type= NA chr1 144449379 144461669 144449379 144461669 - transcript5558.chr1.nnic@NBPF15 transcript5558.chr1.nnic protein_coding 144461381,144460843,144459366,144456537,144449379 144461669,144460961,144459483,144456805,144452149 Gene ID= ENSG00000266338.6 TPM= 1.81 Transcript Type= NA chr1 145164100 145215895 145164100 145215895 - transcript5562.chr1.nic@AC241585.2 transcript5562.chr1.nic transcribed_unprocessed_pseudogene 145215639,145170942,145169527,145166946,145164100 145215895,145171185,145169615,145169086,145164638 Gene ID= ENSG00000272419.6 TPM= 3.62 Transcript Type= NA chr1 145607972 145670460 145607972 145670460 + transcript5576.chr1.nnic@GPR89A transcript5576.chr1.nnic protein_coding 145607972,145616234,145618320,145623054,145623613,145630687,145631664,145643869,145646184,145647175,145663329,145665562,145669834 145608175,145616293,145618423,145623160,145623714,145630807,145631744,145643978,145646272,145647267,145663424,145665651,145670460 Gene ID= ENSG00000117262.18 TPM= 3.62 Transcript Type= NA chr1 145607990 145670463 145607990 145670463 + ENST00000460277.5@GPR89A ENST00000460277.5 protein_coding 145607990,145616234,145618320,145623054,145623593,145630687,145631664,145643869,145646184,145647175,145663329,145665562,145669625,145669834 145608175,145616293,145618423,145623160,145623714,145630807,145631744,145643978,145646272,145647267,145663424,145665651,145669690,145670463 Gene ID= ENSG00000117262.18 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr1 145670855 145708248 145670855 145708248 - transcript5579.chr1.nic@PDZK1 transcript5579.chr1.nic protein_coding 145708018,145707317,145687812,145686477,145682500,145680912,145678449,145673657,145672730,145670855 145708248,145707400,145688023,145686726,145682636,145681107,145678645,145673881,145673020,145671489 Gene ID= ENSG00000174827.13 TPM= 2.72 Transcript Type= NA chr1 145670986 145721596 145670986 145721596 - transcript5581.chr1.nnic@PDZK1 transcript5581.chr1.nnic protein_coding 145721493,145687812,145686477,145682500,145680912,145678449,145673657,145672730,145670986 145721596,145688023,145686726,145682636,145681107,145678645,145673881,145673020,145671489 Gene ID= ENSG00000174827.13 TPM= 1.81 Transcript Type= NA chr1 145744434 145824131 145744434 145824131 - transcript5594.chr1.nnic@RNF115 transcript5594.chr1.nnic protein_coding 145823772,145788908,145784539,145771711,145752978,145751438,145750407,145747995,145746310,145744434 145824131,145788966,145784596,145771919,145753049,145751510,145750500,145748110,145746997,145745475 Gene ID= ENSG00000265491.4 TPM= 16.3 Transcript Type= NA chr1 145823774 145844399 145823774 145844399 + transcript5584.chr1.nic@POLR3C transcript5584.chr1.nic protein_coding 145823774,145825757,145826454,145826606,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339 145824369,145825923,145826492,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145844399 Gene ID= ENSG00000186141.8 TPM= 7.7 Transcript Type= NA chr1 145823898 145844399 145823898 145844399 + transcript5588.chr1.nic@POLR3C transcript5588.chr1.nic protein_coding 145823898,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339 145824547,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145844399 Gene ID= ENSG00000186141.8 TPM= 2.26 Transcript Type= NA chr1 145824181 145842197 145824181 145842197 + transcript5589.chr1.nic@POLR3C transcript5589.chr1.nic protein_coding 145824181,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922 145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145842197 Gene ID= ENSG00000186141.8 TPM= 1.81 Transcript Type= NA chr1 145824219 145842197 145824219 145842197 + transcript5592.chr1.nnic@POLR3C transcript5592.chr1.nnic protein_coding 145824219,145825757,145826454,145826606,145826820,145828749,145833260,145833490,145839890,145840116,145840922 145824369,145825923,145826492,145826709,145827005,145828837,145833364,145833582,145839991,145840165,145842197 Gene ID= ENSG00000186141.8 TPM= 1.81 Transcript Type= NA chr1 145824229 145842505 145824229 145842505 + ENST00000334163.3@POLR3C ENST00000334163.3 protein_coding 145824229,145825757,145826454,145826820,145828749,145833260,145833490,145836494,145836815,145837536,145838056,145839890,145840116,145840922,145842339 145824369,145825923,145826709,145827005,145828837,145833364,145833582,145836574,145836866,145837596,145838206,145839991,145840165,145841071,145842505 Gene ID= ENSG00000186141.8 TPM= 6.34 Transcript Type= protein_coding chr1 145845624 145848951 145845624 145848951 + transcript5606.chr1.nic@NUDT17 transcript5606.chr1.nic protein_coding 145845624,145846013,145846433,145847250,145847583,145848112,145848377 145845832,145846196,145846690,145847348,145847719,145848264,145848951 Gene ID= ENSG00000186364.11 TPM= 1.81 Transcript Type= NA chr1 145845624 145848951 145845624 145848951 + transcript5607.chr1.nic@NUDT17 transcript5607.chr1.nic protein_coding 145845624,145846433,145847250,145847583,145848112,145848377 145845832,145846690,145847348,145847719,145848264,145848951 Gene ID= ENSG00000186364.11 TPM= 2.72 Transcript Type= NA chr1 145848522 145859080 145848522 145859080 - ENST00000393045.6@PIAS3 ENST00000393045.6 protein_coding 145858967,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848522 145859080,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712 Gene ID= ENSG00000131788.15 TPM= 12.22 Transcript Type= protein_coding chr1 145848521 145859910 145848521 145859910 - transcript5597.chr1.nic@PIAS3 transcript5597.chr1.nic protein_coding 145859665,145856589,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848521 145859910,145857006,145856431,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712 Gene ID= ENSG00000131788.15 TPM= 21.28 Transcript Type= NA chr1 145848521 145859807 145848521 145859807 - transcript5601.chr1.nic@PIAS3 transcript5601.chr1.nic protein_coding 145859665,145856347,145856068,145855736,145854746,145854458,145853813,145853504,145851020,145850771,145850453,145850232,145848521 145859807,145857006,145856118,145855826,145854880,145854563,145853886,145853664,145851153,145850939,145850586,145850269,145849712 Gene ID= ENSG00000131788.15 TPM= 2.72 Transcript Type= NA chr1 145866560 145885845 145866560 145885845 - ENST00000355594.8@ANKRD35 ENST00000355594.8 protein_coding 145885720,145879258,145878391,145877968,145876816,145876569,145876140,145874822,145874155,145871982,145868311,145867991,145867287,145866560 145885845,145879388,145878479,145878032,145876873,145876639,145876246,145875006,145874192,145873985,145868400,145868056,145867392,145866765 Gene ID= ENSG00000198483.12 TPM= 2.72 Transcript Type= protein_coding chr1 145891208 145910189 145891208 145910189 - ENST00000369304.7@ITGA10 ENST00000369304.7 protein_coding 145909963,145907354,145907041,145906733,145906394,145904684,145904052,145902811,145902454,145902246,145901877,145901516,145901135,145900790,145900057,145899175,145898936,145898110,145897815,145897512,145897247,145897011,145896769,145896268,145895983,145895631,145895280,145893540,145893161,145891208 145910189,145907465,145907150,145906824,145906508,145904811,145904200,145902961,145902619,145902319,145902021,145901664,145901278,145900993,145900187,145899341,145899078,145898223,145897900,145897653,145897339,145897087,145896858,145896352,145896096,145895711,145895393,145893635,145893274,145892863 Gene ID= ENSG00000143127.12 TPM= 2.72 Transcript Type= protein_coding chr1 145911350 145918837 145911350 145918837 - ENST00000369306.7@PEX11B ENST00000369306.7 protein_coding 145918633,145917701,145916817,145911350 145918837,145917816,145917018,145912566 Gene ID= ENSG00000131779.10 TPM= 47.09 Transcript Type= protein_coding chr1 145933423 145958001 145933423 145958001 - ENST00000604000.3@LIX1L ENST00000604000.3 protein_coding 145957636,145947619,145942713,145937604,145936908,145933423 145958001,145947782,145942853,145937699,145936985,145936552 Gene ID= ENSG00000271601.3 TPM= 26.26 Transcript Type= protein_coding chr1 145960600 145978852 145960600 145978852 + transcript5617.chr1.nnic@POLR3GL transcript5617.chr1.nnic protein_coding 145960600,145961362,145964605,145974825,145975307,145977084,145977483,145977778,145977983,145978361 145960705,145961573,145964768,145974991,145975436,145977152,145977539,145977851,145978096,145978852 Gene ID= ENSG00000121851.12 TPM= 1.81 Transcript Type= NA chr1 145964703 145978848 145964703 145978848 + ENST00000369314.1@POLR3GL ENST00000369314.1 protein_coding 145964703,145974825,145975307,145977084,145977483,145977778,145977983,145978361 145964768,145974991,145975436,145977152,145977539,145977851,145978096,145978848 Gene ID= ENSG00000121851.12 TPM= 63.39 Transcript Type= protein_coding chr1 145992435 145996600 145992435 145996600 - ENST00000582401.5@TXNIP ENST00000582401.5 protein_coding 145996017,145995404,145995144,145994929,145994544,145994281,145994016,145992435 145996600,145995476,145995291,145995031,145994800,145994437,145994167,145993886 Gene ID= ENSG00000265972.5 TPM= 766.09 Transcript Type= protein_coding chr1 147155111 147172269 147155111 147172269 - transcript5645.chr1.nic@PRKAB2 transcript5645.chr1.nic protein_coding 147171989,147167767,147166846,147166498,147162440,147161712,147155111 147172269,147167933,147166939,147166618,147162573,147161780,147159642 Gene ID= ENSG00000131791.7 TPM= 4.07 Transcript Type= NA chr1 147155111 147172326 147155111 147172326 - transcript5649.chr1.nic@PRKAB2 transcript5649.chr1.nic protein_coding 147171989,147166846,147166498,147162440,147161712,147155111 147172326,147166939,147166618,147162573,147161780,147159642 Gene ID= ENSG00000131791.7 TPM= 2.26 Transcript Type= NA chr1 147186262 147225626 147186262 147225626 - transcript5641.chr1.nnic@FMO5 transcript5641.chr1.nnic protein_coding 147225287,147224895,147215754,147213308,147212393,147208852,147201152,147190177,147186626,147186262 147225626,147225066,147215942,147213470,147212535,147209051,147201504,147190249,147187245,147186481 Gene ID= ENSG00000131781.12 TPM= 2.72 Transcript Type= NA chr1 147203127 147225626 147203127 147225626 - transcript5648.chr1.nnic@FMO5 transcript5648.chr1.nnic protein_coding 147225287,147224895,147215754,147213308,147212393,147208852,147203127 147225626,147225066,147215942,147213470,147212535,147209051,147205009 Gene ID= ENSG00000131781.12 TPM= 2.72 Transcript Type= NA chr1 147242656 147295765 147242656 147295765 + transcript5657.chr1.nnic@CHD1L transcript5657.chr1.nnic protein_coding 147242656,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431 147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295765 Gene ID= ENSG00000131778.18 TPM= 3.02 Transcript Type= NA chr1 147242641 147295766 147242641 147295766 + ENST00000431239.5@CHD1L ENST00000431239.5 protein_coding 147242641,147252623,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431 147242830,147252735,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295766 Gene ID= ENSG00000131778.18 TPM= 4.37 Transcript Type= protein_coding chr1 147242684 147295762 147242684 147295762 + ENST00000369258.8@CHD1L ENST00000369258.8 protein_coding 147242684,147252623,147254870,147255813,147256531,147259837,147264422,147265932,147267426,147268782,147270932,147272171,147275354,147276104,147280026,147284351,147285324,147286298,147287635,147291482,147293608,147294409,147295431 147242830,147252735,147254976,147255927,147256562,147259918,147264584,147266087,147267518,147268878,147271005,147272281,147275468,147276257,147280191,147284499,147285487,147286500,147287733,147291552,147293722,147294517,147295762 Gene ID= ENSG00000131778.18 TPM= 57.8 Transcript Type= protein_coding chr1 147647366 147670540 147647366 147670540 - transcript5670.chr1.nic@ACP6 transcript5670.chr1.nic protein_coding 147669830,147659647,147659396,147658960,147655161,147654194,147652592,147650143,147648246,147647366 147670540,147659775,147659526,147659039,147655248,147654326,147652647,147650238,147648411,147647566 Gene ID= ENSG00000162836.11 TPM= 7.24 Transcript Type= NA chr1 147647368 147670540 147647368 147670540 - transcript5672.chr1.nic@ACP6 transcript5672.chr1.nic protein_coding 147669830,147659647,147659396,147658960,147655161,147654194,147652592,147650143,147647368 147670540,147659775,147659526,147659039,147655248,147654326,147652647,147650238,147648411 Gene ID= ENSG00000162836.11 TPM= 3.62 Transcript Type= NA chr1 147928393 147993339 147928393 147993339 + ENST00000314163.11@GPR89B ENST00000314163.11 protein_coding 147928393,147936627,147938714,147943438,147943997,147953345,147954322,147966554,147968875,147969867,147986199,147988432,147992502,147992711 147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966663,147968963,147969959,147986294,147988521,147992567,147993339 Gene ID= ENSG00000188092.14 TPM= 11.77 Transcript Type= protein_coding chr1 147928393 147993339 147928393 147993339 + ENST00000488165.5@GPR89B ENST00000488165.5 protein_coding 147928393,147936627,147938714,147943438,147943977,147953345,147954322,147966554,147968875,147969867,147986199,147988432,147992502,147992711 147928578,147936686,147938817,147943544,147944098,147953465,147954402,147966663,147968963,147969959,147986294,147988521,147992567,147993339 Gene ID= ENSG00000188092.14 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr1 148359994 148378663 148359994 148378663 - transcript5683.chr1.nnic@LINC01138 transcript5683.chr1.nnic processed_transcript 148378056,148363188,148359994 148378663,148363386,148362284 Gene ID= ENSG00000274020.2 TPM= 1.81 Transcript Type= NA chr1 148951937 148981746 148951937 148981746 + ENST00000479408.6@PDE4DIP ENST00000479408.6 protein_coding 148951937,148960654,148961837,148962196,148962428,148965484,148966543,148966839,148967726,148968836,148972180,148972511,148974514,148977937,148978278,148979737,148981270 148952154,148960785,148961956,148962288,148962640,148965642,148966656,148966976,148967905,148969030,148972344,148972592,148974605,148978053,148978415,148979849,148981746 Gene ID= ENSG00000178104.19 TPM= 1.81 Transcript Type= protein_coding chr1 149086618 149103561 149086618 149103561 - transcript5696.chr1.nnic@NBPF9 transcript5696.chr1.nnic protein_coding 149103271,149102729,149101262,149098438,149090753,149086618 149103561,149102847,149101379,149098706,149090894,149090428 Gene ID= ENSG00000269713.7 TPM= 1.81 Transcript Type= NA chr1 149091363 149103529 149091363 149103529 - transcript5698.chr1.nnic@NBPF9 transcript5698.chr1.nnic protein_coding 149103271,149102729,149101262,149098438,149091363 149103529,149102960,149101379,149098706,149094132 Gene ID= ENSG00000269713.7 TPM= 1.81 Transcript Type= NA chr1 149188437 149285824 149188437 149285824 - transcript5700.chr1.nnic@AC245297.1 transcript5700.chr1.nnic unprocessed_pseudogene 149285454,149266969,149261640,149240377,149201014,149198361,149197996,149188437 149285824,149267024,149261791,149240487,149201090,149198484,149198171,149190531 Gene ID= ENSG00000215861.5 TPM= 3.62 Transcript Type= NA chr1 149899597 149900792 149899597 149900792 + ENST00000369152.5@BOLA1 ENST00000369152.5 protein_coding 149899597,149900010 149899672,149900792 Gene ID= ENSG00000178096.8 TPM= 16.3 Transcript Type= protein_coding chr1 149903318 149917882 149903318 149917882 - ENST00000369146.7@SV2A ENST00000369146.7 protein_coding 149917739,149913219,149911800,149910826,149910570,149909801,149909461,149909192,149908042,149907700,149906650,149905880,149903318 149917882,149914187,149911980,149910977,149910703,149909890,149909571,149909280,149908206,149907833,149906856,149906039,149905197 Gene ID= ENSG00000159164.9 TPM= 5.43 Transcript Type= protein_coding chr1 149928650 149937339 149928650 149937339 - transcript5725.chr1.nnic@MTMR11 transcript5725.chr1.nnic protein_coding 149936582,149936154,149935584,149935299,149934986,149934448,149934191,149933855,149933610,149933406,149932264,149931944,149931260,149930792,149930365,149929623,149928650 149937339,149936229,149935705,149935359,149935128,149934526,149934326,149933942,149933698,149933530,149932330,149932014,149931379,149930965,149930547,149929916,149929317 Gene ID= ENSG00000014914.20 TPM= 3.8 Transcript Type= NA chr1 149928650 149936877 149928650 149936877 - transcript5731.chr1.nnic@MTMR11 transcript5731.chr1.nnic protein_coding 149936582,149936154,149935584,149935299,149934986,149934448,149934191,149933855,149933610,149933406,149932264,149931944,149931260,149930792,149930365,149929623,149928650 149936877,149936229,149935705,149935359,149935128,149934526,149934326,149933942,149933698,149933530,149932330,149932014,149931473,149930965,149930547,149929916,149929317 Gene ID= ENSG00000014914.20 TPM= 3.8 Transcript Type= NA chr1 149928650 149936869 149928650 149936869 - transcript5735.chr1.nic@MTMR11 transcript5735.chr1.nic protein_coding 149936582,149936154,149935584,149935299,149934986,149934448,149934191,149933855,149933610,149933406,149932264,149931944,149930792,149930365,149929623,149928650 149936869,149936229,149935705,149935359,149935128,149934526,149934326,149933942,149933698,149933530,149932330,149932014,149930965,149930547,149929916,149929317 Gene ID= ENSG00000014914.20 TPM= 2.9 Transcript Type= NA chr1 149928650 149931596 149928650 149931596 - transcript5739.chr1.nic@MTMR11 transcript5739.chr1.nic protein_coding 149931260,149930792,149930365,149929623,149928650 149931596,149930965,149930547,149929916,149929317 Gene ID= ENSG00000014914.20 TPM= 3.8 Transcript Type= NA chr1 149928652 149936867 149928652 149936867 - ENST00000439741.3@MTMR11 ENST00000439741.3 protein_coding 149936582,149936154,149935584,149935299,149934986,149934448,149934191,149933855,149933610,149933406,149932264,149931944,149931260,149930792,149930365,149929623,149928652 149936867,149936229,149935705,149935359,149935128,149934526,149934326,149933942,149933698,149933530,149932330,149932014,149931426,149930965,149930547,149929916,149929317 Gene ID= ENSG00000014914.20 TPM= 59.04 Transcript Type= protein_coding chr1 150067310 150145328 150067310 150145328 + transcript5748.chr1.nic@VPS45 transcript5748.chr1.nic protein_coding 150067310,150068630,150072166,150076233,150076916,150077094,150077669,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709 150067606,150068764,150072226,150076312,150076984,150077231,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145328 Gene ID= ENSG00000136631.12 TPM= 3.62 Transcript Type= NA chr1 150067312 150145327 150067312 150145327 + ENST00000369130.7@VPS45 ENST00000369130.7 protein_coding 150067312,150068630,150072166,150076233,150076916,150077094,150077669,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709 150067950,150068764,150072226,150076312,150076984,150077231,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145327 Gene ID= ENSG00000136631.12 TPM= 50.71 Transcript Type= protein_coding chr1 150067695 150145328 150067695 150145328 + transcript5754.chr1.nic@VPS45 transcript5754.chr1.nic protein_coding 150067695,150068630,150072166,150076233,150081342,150081884,150082716,150091937,150092302,150093527,150110496,150144709 150067950,150068764,150072226,150077779,150081476,150081997,150082883,150092095,150092409,150093648,150110627,150145328 Gene ID= ENSG00000136631.12 TPM= 3.62 Transcript Type= NA chr1 150149980 150160065 150149980 150160065 + ENST00000369124.4@PLEKHO1 ENST00000369124.4 protein_coding 150149980,150150912,150156066,150156911,150157385,150158819 150150287,150151058,150156206,150157015,150157486,150160065 Gene ID= ENSG00000023902.13 TPM= 155.3 Transcript Type= protein_coding chr1 150218417 150236156 150218417 150236156 - ENST00000583931.5@ANP32E ENST00000583931.5 protein_coding 150235733,150231777,150230571,150229072,150226608,150223186,150218417 150236156,150231926,150230693,150229237,150226795,150223240,150220761 Gene ID= ENSG00000143401.14 TPM= 55.24 Transcript Type= protein_coding chr1 150265405 150268419 150265405 150268419 - transcript5773.chr1.nnic@APH1A transcript5773.chr1.nnic protein_coding 150268308,150267957,150267716,150267356,150267075,150265405 150268419,150268127,150267789,150267478,150267202,150266656 Gene ID= ENSG00000117362.12 TPM= 8.15 Transcript Type= NA chr1 150265404 150268999 150265404 150268999 - ENST00000369109.7@APH1A ENST00000369109.7 protein_coding 150268698,150267957,150267716,150267356,150267075,150266533,150265404 150268999,150268127,150267789,150267478,150267202,150266656,150266194 Gene ID= ENSG00000117362.12 TPM= 35.32 Transcript Type= protein_coding chr1 150282543 150287093 150282543 150287093 + ENST00000369094.5@CIART ENST00000369094.5 protein_coding 150282543,150283462,150283805,150284426,150284597,150286430 150282618,150283633,150283880,150284504,150284708,150287093 Gene ID= ENSG00000159208.15 TPM= 2.42 Transcript Type= protein_coding chr1 150282543 150287093 150282543 150287093 + ENST00000369095.5@CIART ENST00000369095.5 protein_coding 150282543,150283208,150283805,150284426,150284597,150286430 150282618,150283633,150283880,150284504,150284708,150287093 Gene ID= ENSG00000159208.15 TPM= 1.51 Transcript Type= protein_coding chr1 150282819 150287093 150282819 150287093 + ENST00000290363.5@CIART ENST00000290363.5 protein_coding 150282819,150283805,150284426,150284597,150286430 150283633,150283880,150284504,150284708,150287093 Gene ID= ENSG00000159208.15 TPM= 4.23 Transcript Type= protein_coding chr1 150293920 150308979 150293920 150308979 + ENST00000581066.2@MRPS21 ENST00000581066.2 protein_coding 150293920,150308048 150294449,150308979 Gene ID= ENSG00000266472.5 TPM= 64.29 Transcript Type= protein_coding chr1 150321536 150353232 150321536 150353232 + transcript5788.chr1.nic@PRPF3 transcript5788.chr1.nic protein_coding 150321536,150324895,150325751,150327557,150328320,150332684,150332979,150334935,150338160,150340398,150343309,150344162,150344434,150346018,150346408,150349157,150352833 150321592,150325087,150325881,150327652,150328466,150332767,150333199,150335241,150338326,150340477,150343452,150344261,150344547,150346136,150346491,150349218,150353232 Gene ID= ENSG00000117360.12 TPM= 4.53 Transcript Type= NA chr1 150364650 150476566 150364650 150476566 + ENST00000401000.8@RPRD2 ENST00000401000.8 protein_coding 150364650,150417596,150440923,150443231,150444251,150446226,150457288,150460060,150464527,150470561 150364919,150417725,150441023,150443283,150444377,150446401,150457570,150460317,150464727,150476566 Gene ID= ENSG00000163125.15 TPM= 15.39 Transcript Type= protein_coding chr1 150487399 150507610 150487399 150507610 + transcript5805.chr1.nnic@TARS2 transcript5805.chr1.nnic protein_coding 150487399,150487858,150488964,150490601,150491394,150491598,150492411,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916 150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507610 Gene ID= ENSG00000143374.16 TPM= 7.4 Transcript Type= NA chr1 150487417 150507602 150487417 150507602 + ENST00000369064.7@TARS2 ENST00000369064.7 protein_coding 150487417,150487858,150488964,150490601,150491394,150491598,150492411,150496482,150496810,150497530,150498502,150498897,150499216,150504335,150504632,150504906,150505591,150506916 150487516,150488054,150489087,150490725,150491511,150491662,150492489,150496628,150496908,150497747,150498664,150499034,150499293,150504435,150504733,150504978,150505705,150507602 Gene ID= ENSG00000143374.16 TPM= 65.35 Transcript Type= protein_coding chr1 150508085 150513789 150508085 150513789 + ENST00000369047.8@ECM1 ENST00000369047.8 protein_coding 150508085,150509531,150509661,150509922,150510102,150510876,150511457,150512352,150512725,150513237 150508279,150509581,150509762,150510002,150510182,150511198,150511831,150512572,150512812,150513789 Gene ID= ENSG00000143369.14 TPM= 48.9 Transcript Type= protein_coding chr1 150549369 150560932 150549369 150560932 + ENST00000271643.8@ADAMTSL4 ENST00000271643.8 protein_coding 150549369,150549822,150552205,150552543,150552898,150553426,150554365,150555429,150556162,150556621,150556939,150557150,150557494,150557945,150558473,150558962,150559287,150559761,150560060 150549499,150549895,150552308,150552600,150553253,150554122,150554467,150555565,150556366,150556793,150557050,150557335,150557623,150558149,150558649,150559165,150559466,150559905,150560932 Gene ID= ENSG00000143382.14 TPM= 3.62 Transcript Type= protein_coding chr1 150574556 150579590 150574556 150579590 - ENST00000369026.2@MCL1 ENST00000369026.2 protein_coding 150578843,150578244,150574556 150579590,150578491,150577491 Gene ID= ENSG00000143384.12 TPM= 324.19 Transcript Type= protein_coding chr1 150621251 150629596 150621251 150629596 - ENST00000369014.9@ENSA ENST00000369014.9 protein_coding 150629414,150627467,150625642,150621251 150629596,150627592,150625808,150622859 Gene ID= ENSG00000143420.18 TPM= 26.26 Transcript Type= protein_coding chr1 150623281 150629577 150623281 150629577 - ENST00000271690.12@ENSA ENST00000271690.12 protein_coding 150629414,150627467,150623281 150629577,150627592,150625808 Gene ID= ENSG00000143420.18 TPM= 71.54 Transcript Type= protein_coding chr1 150627054 150629577 150627054 150629577 - ENST00000362052.7@ENSA ENST00000362052.7 protein_coding 150629414,150627054 150629577,150627592 Gene ID= ENSG00000143420.18 TPM= 2.72 Transcript Type= protein_coding chr1 150646223 150697189 150646223 150697189 - transcript5838.chr1.nnic@GOLPH3L transcript5838.chr1.nnic protein_coding 150696992,150694656,150661814,150646223 150697189,150694850,150661928,150648748 Gene ID= ENSG00000143457.10 TPM= 1.81 Transcript Type= NA chr1 150646225 150697024 150646225 150697024 - ENST00000271732.7@GOLPH3L ENST00000271732.7 protein_coding 150696992,150694656,150663632,150661814,150646225 150697024,150694850,150663763,150661928,150648748 Gene ID= ENSG00000143457.10 TPM= 5.43 Transcript Type= protein_coding chr1 150796208 150808323 150796208 150808323 - ENST00000271651.7@CTSK ENST00000271651.7 protein_coding 150808214,150806686,150806102,150805861,150804021,150799544,150799168,150796208 150808323,150806806,150806224,150806016,150804239,150799709,150799273,150796898 Gene ID= ENSG00000143387.12 TPM= 5.43 Transcript Type= protein_coding chr1 150809708 150876601 150809708 150876601 - transcript5843.chr1.nnic@ARNT transcript5843.chr1.nnic protein_coding 150876543,150861361,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150809708 150876601,150861395,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110 Gene ID= ENSG00000143437.20 TPM= 4.63 Transcript Type= NA chr1 150809705 150876768 150809705 150876768 - ENST00000358595.9@ARNT ENST00000358595.9 protein_coding 150876543,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817920,150817361,150817082,150816788,150816259,150814077,150813172,150809705 150876768,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150818030,150817433,150817202,150816890,150816406,150814239,150813338,150812110 Gene ID= ENSG00000143437.20 TPM= 56.7 Transcript Type= protein_coding chr1 150809708 150876598 150809708 150876598 - transcript5856.chr1.nnic@ARNT transcript5856.chr1.nnic protein_coding 150876543,150858349,150852762,150846263,150842424,150839441,150836280,150834538,150832334,150831818,150829904,150829093,150826543,150823194,150817361,150817082,150816788,150816259,150814077,150813172,150809708 150876598,150858460,150852806,150846307,150842468,150839654,150836493,150834640,150832399,150831903,150829980,150829227,150826617,150823345,150817433,150817202,150816890,150816406,150814239,150813338,150812110 Gene ID= ENSG00000143437.20 TPM= 4.72 Transcript Type= NA chr1 150926339 150964735 150926339 150964735 + ENST00000271640.9@SETDB1 ENST00000271640.9 protein_coding 150926339,150927704,150929967,150939940,150941329,150942563,150942852,150943920,150944918,150946886,150949122,150949370,150950458,150951365,150959178,150960563,150962130,150962587,150962974,150963530,150963995,150964247 150926517,150927974,150930118,150939974,150941428,150942688,150943053,150943993,150945108,150947012,150949278,150949525,150951090,150951481,150959347,150961191,150962158,150962719,150963139,150963741,150964083,150964735 Gene ID= ENSG00000143379.12 TPM= 3.62 Transcript Type= protein_coding chr1 150965173 150975003 150965173 150975003 - ENST00000271688.10@CERS2 ENST00000271688.10 protein_coding 150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173 150975003,150969131,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288 Gene ID= ENSG00000143418.19 TPM= 34.73 Transcript Type= protein_coding chr1 150965173 150975004 150965173 150975004 - ENST00000368954.9@CERS2 ENST00000368954.9 protein_coding 150974619,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173 150975004,150969091,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288 Gene ID= ENSG00000143418.19 TPM= 745.58 Transcript Type= protein_coding chr1 150965173 150974582 150965173 150974582 - transcript5874.chr1.nic@CERS2 transcript5874.chr1.nic protein_coding 150974318,150968918,150968395,150968083,150967820,150967664,150967392,150967074,150966756,150966476,150965173 150974582,150969091,150968512,150968201,150967877,150967714,150967484,150967202,150966862,150966629,150966288 Gene ID= ENSG00000143418.19 TPM= 33.82 Transcript Type= NA chr1 151008421 151035713 151008421 151035713 + transcript5908.chr1.nic@PRUNE1 transcript5908.chr1.nic protein_coding 151008421,151017812,151027233,151028786,151033806 151008671,151017904,151027327,151028944,151035713 Gene ID= ENSG00000143363.15 TPM= 3.17 Transcript Type= NA chr1 151008477 151035713 151008477 151035713 + ENST00000271620.7@PRUNE1 ENST00000271620.7 protein_coding 151008477,151017812,151018467,151024611,151025515,151027233,151028786,151033806 151008671,151017904,151018669,151024795,151025673,151027327,151028944,151035713 Gene ID= ENSG00000143363.15 TPM= 4.98 Transcript Type= protein_coding chr1 151047835 151051394 151047835 151051394 + transcript5914.chr1.nnic@C1orf56 transcript5914.chr1.nnic protein_coding 151047835,151050438,151050595 151048852,151050484,151051394 Gene ID= ENSG00000143443.9 TPM= 1.81 Transcript Type= NA chr1 151050349 151059628 151050349 151059628 - transcript5916.chr1.nic@CDC42SE1 transcript5916.chr1.nic protein_coding 151059479,151054231,151050349 151059628,151055993,151053327 Gene ID= ENSG00000197622.12 TPM= 9.06 Transcript Type= NA chr1 151057758 151068497 151057758 151068497 + ENST00000368921.4@MLLT11 ENST00000368921.4 protein_coding 151057758,151067219 151060553,151068497 Gene ID= ENSG00000213190.3 TPM= 5.43 Transcript Type= protein_coding chr1 151070604 151125542 151070604 151125542 + ENST00000368918.7@GABPB2 ENST00000368918.7 protein_coding 151070604,151088190,151090406,151093192,151097852,151103562,151107037,151117392,151117957 151070934,151088297,151090573,151093386,151098002,151103675,151107222,151117516,151125542 Gene ID= ENSG00000143458.11 TPM= 1.81 Transcript Type= protein_coding chr1 151131708 151146670 151131708 151146670 - transcript5927.chr1.nnic@SEMA6C transcript5927.chr1.nnic protein_coding 151146433,151144385,151142504,151139976,151139638,151139425,151138630,151138316,151137711,151136857,151136448,151136011,151135591,151135163,151134798,151134620,151134401,151131708 151146670,151144434,151142675,151140090,151139701,151139481,151138731,151138406,151137799,151137074,151136579,151136163,151135764,151135309,151134875,151134675,151134445,151133318 Gene ID= ENSG00000143434.15 TPM= 2.26 Transcript Type= NA chr1 151131685 151146628 151131685 151146628 - ENST00000368914.7@SEMA6C ENST00000368914.7 protein_coding 151146433,151144385,151142504,151139976,151139638,151139425,151138630,151138316,151137986,151137711,151136857,151136448,151136011,151135591,151135163,151134798,151134620,151134401,151131685 151146628,151144434,151142675,151140090,151139701,151139481,151138731,151138406,151138105,151137799,151137074,151136579,151136163,151135764,151135309,151134875,151134675,151134445,151133517 Gene ID= ENSG00000143434.15 TPM= 4.07 Transcript Type= protein_coding chr1 151156629 151159749 151156629 151159749 + ENST00000368910.3@TNFAIP8L2 ENST00000368910.3 protein_coding 151156629,151158666 151156722,151159749 Gene ID= ENSG00000163154.5 TPM= 3.62 Transcript Type= protein_coding chr1 151166042 151170297 151166042 151170297 + ENST00000368905.8@SCNM1 ENST00000368905.8 protein_coding 151166042,151166471,151166934,151167121,151167326,151168144,151168986 151166203,151166541,151167022,151167218,151167414,151168338,151170297 Gene ID= ENSG00000163156.11 TPM= 11.77 Transcript Type= protein_coding chr1 151166079 151169138 151166079 151169138 + ENST00000368902.1@SCNM1 ENST00000368902.1 protein_coding 151166079,151166471,151166934,151167121,151167326,151168144,151168986 151166252,151166541,151167022,151167218,151167414,151168338,151169138 Gene ID= ENSG00000163156.11 TPM= 4.53 Transcript Type= protein_coding chr1 151176304 151190213 151176304 151190213 - ENST00000368892.8@VPS72 ENST00000368892.8 protein_coding 151190005,151185798,151185506,151184317,151178001,151176304 151190213,151185950,151185620,151184493,151178145,151177031 Gene ID= ENSG00000163159.12 TPM= 28.07 Transcript Type= protein_coding chr1 151198551 151249536 151198551 151249536 + ENST00000349792.9@PIP5K1A ENST00000349792.9 protein_coding 151198551,151224248,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151242123,151242438,151246920,151247863 151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151242269,151242567,151246965,151249536 Gene ID= ENSG00000143398.19 TPM= 34.41 Transcript Type= protein_coding chr1 151198552 151249537 151198552 151249537 + transcript5941.chr1.nnic@PIP5K1A transcript5941.chr1.nnic protein_coding 151198552,151224248,151227320,151231671,151232248,151232551,151234197,151236558,151238182,151239130,151239955,151246920,151247863 151199081,151224279,151227400,151231801,151232365,151232703,151234496,151236763,151238265,151239178,151240039,151246965,151249537 Gene ID= ENSG00000143398.19 TPM= 6.34 Transcript Type= NA chr1 151254703 151267479 151254703 151267479 + ENST00000368884.7@PSMD4 ENST00000368884.7 protein_coding 151254703,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173 151254808,151262301,151264028,151264918,151265234,151265609,151266112,151266439,151266587,151267479 Gene ID= ENSG00000159352.15 TPM= 175.22 Transcript Type= protein_coding chr1 151254709 151267459 151254709 151267459 + ENST00000368881.8@PSMD4 ENST00000368881.8 protein_coding 151254709,151262161,151263914,151264832,151265166,151265394,151266004,151266308,151266520,151267173 151254808,151262301,151264028,151264918,151265234,151265609,151266121,151266439,151266587,151267459 Gene ID= ENSG00000159352.15 TPM= 6.79 Transcript Type= protein_coding chr1 151284830 151292153 151284830 151292153 + transcript5966.chr1.nic@ZNF687 transcript5966.chr1.nic protein_coding 151284830,151288528,151289095,151289378,151289678,151290122,151290432,151290715 151288406,151288706,151289271,151289540,151290007,151290234,151290573,151292153 Gene ID= ENSG00000143373.17 TPM= 12.68 Transcript Type= NA chr1 151291797 151327438 151291797 151327438 - transcript5947.chr1.nic@PI4KB transcript5947.chr1.nic protein_coding 151327271,151326172,151324745,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797 151327438,151326373,151324917,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033 Gene ID= ENSG00000143393.16 TPM= 12.12 Transcript Type= NA chr1 151291797 151327711 151291797 151327711 - transcript5956.chr1.nic@PI4KB transcript5956.chr1.nic protein_coding 151327271,151326172,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797 151327711,151326373,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033 Gene ID= ENSG00000143393.16 TPM= 29.32 Transcript Type= NA chr1 151291797 151327715 151291797 151327715 - ENST00000368874.8@PI4KB ENST00000368874.8 protein_coding 151327271,151315573,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151291797 151327715,151316509,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033 Gene ID= ENSG00000143393.16 TPM= 41.4 Transcript Type= protein_coding chr1 151292132 151327411 151292132 151327411 - ENST00000368873.5@PI4KB ENST00000368873.5 protein_coding 151327271,151315573,151310211,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292132 151327411,151316509,151310255,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033 Gene ID= ENSG00000143393.16 TPM= 14.38 Transcript Type= protein_coding chr1 151292133 151327657 151292133 151327657 - ENST00000529142.5@PI4KB ENST00000529142.5 protein_coding 151327271,151307574,151306136,151303541,151302194,151301844,151298808,151294409,151294018,151292133 151327657,151307801,151306363,151303650,151302298,151301967,151299073,151294541,151294138,151293033 Gene ID= ENSG00000143393.16 TPM= 2.38 Transcript Type= protein_coding chr1 151340640 151347219 151340640 151347219 - transcript5971.chr1.nic@RFX5 transcript5971.chr1.nic protein_coding 151347151,151346489,151346205,151345928,151345106,151344728,151344417,151344197,151343681,151343342,151340640 151347219,151346606,151346333,151345961,151345188,151344847,151344536,151344278,151343882,151343442,151343178 Gene ID= ENSG00000143390.17 TPM= 21.73 Transcript Type= NA chr1 151364302 151372733 151364302 151372733 - ENST00000368868.9@SELENBP1 ENST00000368868.9 protein_coding 151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364302 151372733,151369769,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705 Gene ID= ENSG00000143416.20 TPM= 28.98 Transcript Type= protein_coding chr1 151364305 151372703 151364305 151372703 - ENST00000426705.6@SELENBP1 ENST00000426705.6 protein_coding 151372638,151369713,151369442,151369004,151368199,151366722,151366275,151365768,151365563,151365189,151364926,151364305 151372703,151369978,151369554,151369189,151368319,151366904,151366453,151365846,151365684,151365281,151365044,151364705 Gene ID= ENSG00000143416.20 TPM= 1.81 Transcript Type= protein_coding chr1 151399534 151401944 151399534 151401944 + ENST00000290541.6@PSMB4 ENST00000290541.6 protein_coding 151399534,151399981,151400442,151400764,151401239,151401542,151401817 151399727,151400187,151400588,151400845,151401355,151401630,151401944 Gene ID= ENSG00000159377.10 TPM= 76.97 Transcript Type= protein_coding chr1 151402724 151459465 151402724 151459465 - ENST00000271715.6@POGZ ENST00000271715.6 protein_coding 151459152,151442081,151440928,151430666,151429603,151428123,151427823,151424955,151423949,151423397,151412296,151411625,151408694,151408409,151408100,151407235,151406911,151406607,151402724 151459465,151442205,151441086,151430841,151429711,151428413,151428041,151425061,151424286,151423551,151412396,151411771,151408828,151408581,151408240,151407291,151407023,151406631,151406464 Gene ID= ENSG00000143442.21 TPM= 10.87 Transcript Type= protein_coding chr1 151540305 151583583 151540305 151583583 + ENST00000368849.7@TUFT1 ENST00000368849.7 protein_coding 151540305,151562091,151562585,151563904,151564525,151566163,151569657,151574270,151574911,151578721,151579649,151580942,151581644 151540426,151562165,151562686,151563990,151564614,151566228,151569770,151574398,151575005,151578826,151579732,151581042,151583583 Gene ID= ENSG00000143367.15 TPM= 3.17 Transcript Type= protein_coding chr1 151540308 151583583 151540308 151583583 + ENST00000368848.6@TUFT1 ENST00000368848.6 protein_coding 151540308,151562585,151563904,151564525,151566163,151569657,151574270,151574911,151578721,151579649,151580942,151581644 151540426,151562686,151563990,151564614,151566228,151569770,151574398,151575005,151578826,151579732,151581042,151583583 Gene ID= ENSG00000143367.15 TPM= 14.94 Transcript Type= protein_coding chr1 151759643 151763564 151759643 151763564 - ENST00000368830.7@MRPL9 ENST00000368830.7 protein_coding 151763327,151762990,151762376,151762105,151761451,151760816,151759643 151763564,151763146,151762500,151762155,151761552,151760899,151760181 Gene ID= ENSG00000143436.10 TPM= 48.45 Transcript Type= protein_coding chr1 151759649 151763540 151759649 151763540 - transcript6000.chr1.nic@MRPL9 transcript6000.chr1.nic protein_coding 151763327,151762990,151762376,151762105,151761451,151760816,151759649 151763540,151763146,151762500,151762155,151761552,151760899,151760031 Gene ID= ENSG00000143436.10 TPM= 1.81 Transcript Type= NA chr1 151759647 151763496 151759647 151763496 - ENST00000467306.5@MRPL9 ENST00000467306.5 protein_coding 151763327,151762950,151762376,151762105,151761451,151760816,151759647 151763496,151763146,151762500,151762155,151761552,151760899,151760181 Gene ID= ENSG00000143436.10 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr1 151771564 151790522 151771564 151790522 - ENST00000368827.10@TDRKH ENST00000368827.10 protein_coding 151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151774413,151771564 151790522,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504,151771986 Gene ID= ENSG00000182134.15 TPM= 1.81 Transcript Type= protein_coding chr1 151773488 151790558 151773488 151790558 - transcript6007.chr1.nic@TDRKH transcript6007.chr1.nic protein_coding 151790380,151782899,151781481,151779951,151779103,151778685,151776439,151776096,151775820,151775392,151775065,151774710,151774413,151773488 151790558,151783049,151781587,151780140,151779242,151779006,151776599,151776268,151775884,151775543,151775166,151774806,151774504,151774227 Gene ID= ENSG00000182134.15 TPM= 3.62 Transcript Type= NA chr1 151842126 151851549 151842126 151851549 + transcript6018.chr1.nnic@AL450992.2 transcript6018.chr1.nnic antisense_RNA 151842126,151844045,151850233 151843308,151844242,151851549 Gene ID= ENSG00000234614.1 TPM= 1.81 Transcript Type= NA chr1 151872428 151909458 151872428 151909458 - transcript6019.chr1.nnic@THEM4 transcript6019.chr1.nnic protein_coding 151909360,151907321,151895008,151889983,151889214,151888273,151877001,151872428 151909458,151907406,151895194,151890214,151889373,151888383,151877125,151874928 Gene ID= ENSG00000159445.12 TPM= 2.72 Transcript Type= NA chr1 151874055 151909502 151874055 151909502 - ENST00000471464.5@THEM4 ENST00000471464.5 protein_coding 151909360,151895008,151889983,151889214,151888273,151877001,151874055 151909502,151895194,151890214,151889373,151888383,151877125,151874928 Gene ID= ENSG00000159445.12 TPM= 13.58 Transcript Type= nonsense_mediated_decay chr1 151982918 151992578 151982918 151992578 - ENST00000368809.1@S100A10 ENST00000368809.1 protein_coding 151992523,151986099,151982918 151992578,151986251,151983324 Gene ID= ENSG00000197747.8 TPM= 12.68 Transcript Type= protein_coding chr1 152032506 152037035 152032506 152037035 - ENST00000271638.2@S100A11 ENST00000271638.2 protein_coding 152036913,152033648,152032506 152037035,152033800,152032823 Gene ID= ENSG00000163191.5 TPM= 197.41 Transcript Type= protein_coding chr1 152189284 152365665 152189284 152365665 + transcript6026.chr1.nnic@FLG-AS1 transcript6026.chr1.nnic antisense_RNA 152189284,152248895,152332583,152335339,152337989,152341087,152363987 152189655,152249012,152332748,152335439,152338089,152341210,152365665 Gene ID= ENSG00000237975.6 TPM= 1.81 Transcript Type= NA chr1 153357822 153361021 153357822 153361021 + transcript6027.chr1.nnic@S100A9 transcript6027.chr1.nnic protein_coding 153357822,153358269,153360644 153357881,153358403,153361021 Gene ID= ENSG00000163220.10 TPM= 1.81 Transcript Type= NA chr1 153357854 153361027 153357854 153361027 + ENST00000368738.3@S100A9 ENST00000368738.3 protein_coding 153357854,153358269,153360644 153357881,153358433,153361027 Gene ID= ENSG00000163220.10 TPM= 71.54 Transcript Type= protein_coding chr1 153390032 153391188 153390032 153391188 - ENST00000368733.3@S100A8 ENST00000368733.3 protein_coding 153391041,153390395,153390032 153391188,153390557,153390243 Gene ID= ENSG00000143546.9 TPM= 46.18 Transcript Type= protein_coding chr1 153534599 153536222 153534599 153536222 - ENST00000368719.8@S100A6 ENST00000368719.8 protein_coding 153535949,153535202,153534599 153536222,153535360,153534830 Gene ID= ENSG00000197956.9 TPM= 367.65 Transcript Type= protein_coding chr1 153534599 153536215 153534599 153536215 - ENST00000496817.5@S100A6 ENST00000496817.5 protein_coding 153535949,153535202,153534599 153536215,153535375,153534830 Gene ID= ENSG00000197956.9 TPM= 3.62 Transcript Type= protein_coding chr1 153543613 153545802 153543613 153545802 - ENST00000354332.8@S100A4 ENST00000354332.8 protein_coding 153545753,153545470,153544654,153543613 153545802,153545518,153544809,153543923 Gene ID= ENSG00000196154.11 TPM= 1.2 Transcript Type= protein_coding chr1 153543613 153545885 153543613 153545885 - ENST00000368716.8@S100A4 ENST00000368716.8 protein_coding 153545753,153544654,153543613 153545885,153544809,153543923 Gene ID= ENSG00000196154.11 TPM= 65.5 Transcript Type= protein_coding chr1 153543613 153545063 153543613 153545063 - ENST00000368715.5@S100A4 ENST00000368715.5 protein_coding 153544958,153544654,153543613 153545063,153544809,153543923 Gene ID= ENSG00000196154.11 TPM= 1.2 Transcript Type= protein_coding chr1 153547329 153549437 153547329 153549437 - transcript6044.chr1.nnic@S100A3 transcript6044.chr1.nnic protein_coding 153549367,153548345,153547329 153549437,153548490,153547846 Gene ID= ENSG00000188015.9 TPM= 1.81 Transcript Type= NA chr1 153606886 153613083 153606886 153613083 - ENST00000368706.8@S100A16 ENST00000368706.8 protein_coding 153612952,153607999,153606886 153613083,153608177,153607692 Gene ID= ENSG00000188643.10 TPM= 82.4 Transcript Type= protein_coding chr1 153618782 153627650 153618782 153627650 - transcript6071.chr1.nic@S100A13 transcript6071.chr1.nic protein_coding 153627483,153626320,153618782 153627650,153626533,153619038 Gene ID= ENSG00000189171.14 TPM= 134.32 Transcript Type= NA chr1 153618804 153627268 153618804 153627268 - ENST00000392623.5@S100A13 ENST00000392623.5 protein_coding 153627139,153626320,153618804 153627268,153626533,153619038 Gene ID= ENSG00000189171.14 TPM= 7.54 Transcript Type= protein_coding chr1 153633982 153646305 153633982 153646305 + ENST00000368690.7@CHTOP ENST00000368690.7 protein_coding 153633982,153636572,153638295,153642243,153643227,153645064 153634343,153636653,153638448,153642429,153643364,153646305 Gene ID= ENSG00000160679.12 TPM= 19.65 Transcript Type= protein_coding chr1 153634027 153646305 153634027 153646305 + transcript6061.chr1.nic@CHTOP transcript6061.chr1.nic protein_coding 153634027,153636572,153642243,153643227,153645064 153634343,153638448,153642429,153643364,153646305 Gene ID= ENSG00000160679.12 TPM= 7.47 Transcript Type= NA chr1 153633982 153646305 153633982 153646305 + ENST00000614256.4@CHTOP ENST00000614256.4 protein_coding 153633982,153636572,153638295,153645064 153634343,153636653,153638448,153646305 Gene ID= ENSG00000160679.12 TPM= 1.31 Transcript Type= protein_coding chr1 153634049 153646306 153634049 153646306 + ENST00000368694.7@CHTOP ENST00000368694.7 protein_coding 153634049,153636572,153638295,153642246,153643227,153645064 153634343,153636653,153638448,153642429,153643364,153646306 Gene ID= ENSG00000160679.12 TPM= 21.46 Transcript Type= protein_coding chr1 153634075 153645470 153634075 153645470 + ENST00000495554.1@CHTOP ENST00000495554.1 protein_coding 153634075,153636572,153645064 153634343,153638448,153645470 Gene ID= ENSG00000160679.12 TPM= 3.8 Transcript Type= processed_transcript chr1 153634080 153646302 153634080 153646302 + ENST00000403433.5@CHTOP ENST00000403433.5 protein_coding 153634080,153636572,153638295,153642246,153645064 153634343,153636653,153638448,153642429,153646302 Gene ID= ENSG00000160679.12 TPM= 2.22 Transcript Type= protein_coding chr1 153658679 153661830 153658679 153661830 + transcript6079.chr1.nnic@SNAPIN transcript6079.chr1.nnic protein_coding 153658679,153659138,153659448,153661200,153661561 153658886,153659184,153659566,153661479,153661830 Gene ID= ENSG00000143553.10 TPM= 5.73 Transcript Type= NA chr1 153658654 153661830 153658654 153661830 + ENST00000368685.5@SNAPIN ENST00000368685.5 protein_coding 153658654,153659138,153659448,153661200 153658886,153659184,153659566,153661830 Gene ID= ENSG00000143553.10 TPM= 105.34 Transcript Type= protein_coding chr1 153658714 153661829 153658714 153661829 + ENST00000462880.1@SNAPIN ENST00000462880.1 protein_coding 153658714,153659448,153661200 153658886,153659566,153661829 Gene ID= ENSG00000143553.10 TPM= 6.64 Transcript Type= processed_transcript chr1 153661788 153671028 153661788 153671028 - ENST00000615950.4@ILF2 ENST00000615950.4 protein_coding 153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153661788 153671028,153670230,153669878,153668576,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556 Gene ID= ENSG00000143621.16 TPM= 9.06 Transcript Type= protein_coding chr1 153662036 153671048 153662036 153671048 - ENST00000361891.8@ILF2 ENST00000361891.8 protein_coding 153670918,153670171,153669836,153668453,153668000,153667555,153665663,153665220,153664396,153664043,153663215,153663019,153662705,153662036 153671048,153670230,153669878,153668557,153668077,153667657,153665728,153665336,153664474,153664130,153663276,153663133,153662795,153662556 Gene ID= ENSG00000143621.16 TPM= 127.68 Transcript Type= protein_coding chr1 153678601 153693991 153678601 153693991 + transcript6084.chr1.nic@NPR1 transcript6084.chr1.nic protein_coding 153678601,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153686646,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106 153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686200,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693991 Gene ID= ENSG00000169418.9 TPM= 3.62 Transcript Type= NA chr1 153678601 153693993 153678601 153693993 + transcript6085.chr1.nic@NPR1 transcript6085.chr1.nic protein_coding 153678601,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106,153693352 153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693197,153693993 Gene ID= ENSG00000169418.9 TPM= 1.81 Transcript Type= NA chr1 153678601 153693993 153678601 153693993 + transcript6087.chr1.nnic@NPR1 transcript6087.chr1.nnic protein_coding 153678601,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686646,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106,153693352 153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693197,153693993 Gene ID= ENSG00000169418.9 TPM= 13.58 Transcript Type= NA chr1 153678637 153693992 153678637 153693992 + ENST00000368680.3@NPR1 ENST00000368680.3 protein_coding 153678637,153680501,153681180,153681704,153682498,153683376,153683740,153684964,153685806,153686123,153686646,153687016,153687200,153687634,153688053,153688953,153689188,153689453,153689806,153690284,153693106,153693352 153679829,153680700,153681293,153681839,153682589,153683511,153683824,153685084,153685880,153686200,153686750,153687087,153687356,153687789,153688221,153689099,153689311,153689521,153689980,153690382,153693197,153693992 Gene ID= ENSG00000169418.9 TPM= 64.29 Transcript Type= protein_coding chr1 153728050 153774807 153728050 153774807 + transcript6097.chr1.nic@INTS3 transcript6097.chr1.nic protein_coding 153728050,153740651,153741285,153746957,153747279,153748689,153751095,153752279,153754642,153757572,153759526,153760311,153760827,153761570,153762728,153763233,153763832,153764118,153764690,153764944,153767674,153768893,153769769,153770198,153770685,153771796,153772340,153772639,153772925,153773193,153774518 153728784,153740734,153741368,153747070,153747363,153748755,153751239,153752408,153754739,153757763,153759613,153760390,153760918,153761676,153762847,153763362,153763886,153764221,153764734,153765063,153767827,153768961,153769844,153770311,153770733,153771963,153772440,153772711,153773081,153773331,153774807 Gene ID= ENSG00000143624.13 TPM= 1.81 Transcript Type= NA chr1 153728059 153774087 153728059 153774087 + transcript6102.chr1.nnic@INTS3 transcript6102.chr1.nnic protein_coding 153728059,153740651,153741285,153746957,153747279,153748689,153751095,153757572,153759526,153760311,153760827,153761570,153762728,153763233,153763832,153764118,153764690,153764944,153767674,153768893,153769769,153770198,153770685,153771796,153772340,153772639,153772925,153773193 153728784,153740734,153741368,153747070,153747363,153748755,153751239,153757763,153759613,153760390,153760918,153761676,153762847,153763362,153763886,153764221,153764734,153765063,153767827,153768961,153769844,153770311,153770733,153771963,153772440,153772711,153773081,153774087 Gene ID= ENSG00000143624.13 TPM= 17.21 Transcript Type= NA chr1 153774354 153780157 153774354 153780157 + ENST00000271857.6@SLC27A3 ENST00000271857.6 protein_coding 153774354,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779826 153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780157 Gene ID= ENSG00000143554.13 TPM= 23.09 Transcript Type= protein_coding chr1 153775283 153780150 153775283 153780150 + transcript6111.chr1.nic@SLC27A3 transcript6111.chr1.nic protein_coding 153775283,153776518,153777062,153777761,153778161,153778463,153778687,153779114,153779343,153779931 153776164,153776727,153777220,153777885,153778355,153778553,153778885,153779211,153779473,153780150 Gene ID= ENSG00000143554.13 TPM= 2.26 Transcript Type= NA chr1 153947675 153958625 153947675 153958625 - ENST00000368633.1@CRTC2 ENST00000368633.1 protein_coding 153958345,153955065,153954873,153954255,153953538,153953266,153952805,153952571,153952397,153952018,153951260,153949115,153948458,153947675 153958625,153955166,153954989,153954316,153953606,153953369,153952834,153952635,153952446,153952262,153951666,153949384,153948644,153948329 Gene ID= ENSG00000160741.16 TPM= 24.45 Transcript Type= protein_coding chr1 153959099 153963492 153959099 153963492 - ENST00000621013.4@SLC39A1 ENST00000621013.4 protein_coding 153963177,153962529,153962220,153959099 153963492,153962747,153962350,153960754 Gene ID= ENSG00000143570.17 TPM= 18.31 Transcript Type= protein_coding chr1 153959099 153963572 153959099 153963572 - ENST00000356205.8@SLC39A1 ENST00000356205.8 protein_coding 153963495,153962529,153962220,153959099 153963572,153962747,153962350,153960754 Gene ID= ENSG00000143570.17 TPM= 314.42 Transcript Type= protein_coding chr1 153959110 153963475 153959110 153963475 - ENST00000368623.7@SLC39A1 ENST00000368623.7 protein_coding 153962529,153962220,153959110 153963475,153962350,153960754 Gene ID= ENSG00000143570.17 TPM= 26.01 Transcript Type= protein_coding chr1 153959111 153963462 153959111 153963462 - ENST00000368621.5@SLC39A1 ENST00000368621.5 protein_coding 153963059,153962529,153962220,153959111 153963462,153962747,153962350,153960754 Gene ID= ENSG00000143570.17 TPM= 12.72 Transcript Type= protein_coding chr1 153959112 153967712 153959112 153967712 - ENST00000310483.10@SLC39A1 ENST00000310483.10 protein_coding 153967386,153963597,153962529,153962220,153959112 153967712,153963703,153962747,153962350,153960754 Gene ID= ENSG00000143570.17 TPM= 7.06 Transcript Type= protein_coding chr1 153967485 153974364 153967485 153974364 + transcript6132.chr1.nic@CREB3L4 transcript6132.chr1.nic protein_coding 153967485,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872 153967884,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974364 Gene ID= ENSG00000143578.15 TPM= 4.37 Transcript Type= NA chr1 153967836 153974364 153967836 153974364 + transcript6134.chr1.nic@CREB3L4 transcript6134.chr1.nic protein_coding 153967836,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872 153968164,153968639,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974364 Gene ID= ENSG00000143578.15 TPM= 2.26 Transcript Type= NA chr1 153967903 153974363 153967903 153974363 + ENST00000368607.7@CREB3L4 ENST00000368607.7 protein_coding 153967903,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872 153968164,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974363 Gene ID= ENSG00000143578.15 TPM= 4.37 Transcript Type= protein_coding chr1 153967921 153974359 153967921 153974359 + ENST00000271889.8@CREB3L4 ENST00000271889.8 protein_coding 153967921,153968522,153968930,153969334,153972744,153972972,153973195,153973380,153973620,153973872 153968184,153968699,153969176,153969455,153972836,153973078,153973263,153973464,153973716,153974359 Gene ID= ENSG00000143578.15 TPM= 1.66 Transcript Type= protein_coding chr1 153974512 153977698 153974512 153977698 - transcript6142.chr1.nic@JTB transcript6142.chr1.nic protein_coding 153977544,153977170,153976976,153976693,153975826,153974512 153977698,153977389,153977013,153976775,153975905,153974835 Gene ID= ENSG00000143543.14 TPM= 6.52 Transcript Type= NA chr1 153974269 153977688 153974269 153977688 - ENST00000271843.8@JTB ENST00000271843.8 protein_coding 153977170,153976976,153976693,153975826,153974269 153977688,153977013,153976775,153975905,153974835 Gene ID= ENSG00000143543.14 TPM= 114.28 Transcript Type= protein_coding chr1 153974512 153977660 153974512 153977660 - ENST00000368589.5@JTB ENST00000368589.5 protein_coding 153977170,153976693,153975826,153974512 153977660,153977013,153975905,153974835 Gene ID= ENSG00000143543.14 TPM= 7.43 Transcript Type= protein_coding chr1 153974510 153986384 153974510 153986384 - transcript6131.chr1.nnic@RAB13 transcript6131.chr1.nnic protein_coding 153986113,153984721,153983521,153983219,153982719,153982535,153982391,153982039,153977170,153976976,153976693,153975826,153974510 153986384,153984781,153983581,153983296,153982808,153982600,153982444,153982176,153978016,153977013,153976775,153975905,153974835 Gene ID= ENSG00000143545.8 TPM= 6.52 Transcript Type= NA chr1 153981651 153986352 153981651 153986352 - ENST00000368575.3@RAB13 ENST00000368575.3 protein_coding 153986113,153984721,153983521,153983219,153982719,153982535,153982391,153981651 153986352,153984781,153983581,153983296,153982808,153982600,153982444,153982176 Gene ID= ENSG00000143545.8 TPM= 124.06 Transcript Type= protein_coding chr1 153990759 153992150 153990759 153992150 + ENST00000368567.4@RPS27 ENST00000368567.4 protein_coding 153990759,153991115,153991566,153992065 153990802,153991223,153991676,153992150 Gene ID= ENSG00000177954.11 TPM= 681.42 Transcript Type= protein_coding chr1 153990763 153992150 153990763 153992150 + ENST00000477151.1@RPS27 ENST00000477151.1 protein_coding 153990763,153990914,153991115,153991566,153992065 153990802,153991034,153991223,153991676,153992150 Gene ID= ENSG00000177954.11 TPM= 13.13 Transcript Type= processed_transcript chr1 153990763 153992145 153990763 153992145 + ENST00000493224.5@RPS27 ENST00000493224.5 protein_coding 153990763,153991115,153991566,153992065 153991034,153991223,153991676,153992145 Gene ID= ENSG00000177954.11 TPM= 24.45 Transcript Type= processed_transcript chr1 154155308 154183172 154155308 154183172 - ENST00000368533.7@TPM3 ENST00000368533.7 protein_coding 154182988,154176115,154173084,154172908,154172029,154170649,154170400,154155308 154183172,154176248,154173201,154172978,154172104,154170711,154170469,154157721 Gene ID= ENSG00000143549.19 TPM= 297.09 Transcript Type= protein_coding chr1 154156364 154183205 154156364 154183205 - ENST00000330188.13@TPM3 ENST00000330188.13 protein_coding 154182988,154176115,154173084,154172908,154171413,154170649,154170400,154156364 154183205,154176248,154173201,154172978,154171488,154170711,154170469,154157721 Gene ID= ENSG00000143549.19 TPM= 3.85 Transcript Type= protein_coding chr1 154206666 154220599 154206666 154220599 - transcript6201.chr1.nnic@C1orf43 transcript6201.chr1.nnic protein_coding 154220342,154219836,154213893,154212458,154212320,154206666 154220599,154219937,154213946,154212624,154212378,154207648 Gene ID= ENSG00000143612.19 TPM= 9.35 Transcript Type= NA chr1 154206706 154220606 154206706 154220606 - ENST00000368521.9@C1orf43 ENST00000368521.9 protein_coding 154220342,154219836,154214457,154213893,154212458,154212320,154206706 154220606,154219937,154214574,154213946,154212624,154212378,154207648 Gene ID= ENSG00000143612.19 TPM= 137.94 Transcript Type= protein_coding chr1 154206720 154220624 154206720 154220624 - ENST00000350592.7@C1orf43 ENST00000350592.7 protein_coding 154220342,154214457,154213893,154212458,154212320,154206720 154220624,154214574,154213946,154212624,154212378,154207648 Gene ID= ENSG00000143612.19 TPM= 14.79 Transcript Type= protein_coding chr1 154220860 154270841 154220860 154270841 + transcript6173.chr1.nic@UBAP2L transcript6173.chr1.nic protein_coding 154220860,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154269362,154270200 154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154269412,154270841 Gene ID= ENSG00000143569.18 TPM= 2.72 Transcript Type= NA chr1 154220849 154270852 154220849 154270852 + ENST00000428931.5@UBAP2L ENST00000428931.5 protein_coding 154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200 154220975,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270852 Gene ID= ENSG00000143569.18 TPM= 6.64 Transcript Type= protein_coding chr1 154220943 154270852 154220943 154270852 + transcript6178.chr1.nic@UBAP2L transcript6178.chr1.nic protein_coding 154220943,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200 154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270852 Gene ID= ENSG00000143569.18 TPM= 5.73 Transcript Type= NA chr1 154220943 154271509 154220943 154271509 + transcript6179.chr1.nic@UBAP2L transcript6179.chr1.nic protein_coding 154220943,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270881 154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154271509 Gene ID= ENSG00000143569.18 TPM= 2.72 Transcript Type= NA chr1 154220849 154263505 154220849 154263505 + ENST00000613315.4@UBAP2L ENST00000613315.4 protein_coding 154220849,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103 154220975,154225213,154227359,154228725,154234738,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263505 Gene ID= ENSG00000143569.18 TPM= 19.7 Transcript Type= protein_coding chr1 154220860 154263503 154220860 154263503 + transcript6185.chr1.nic@UBAP2L transcript6185.chr1.nic protein_coding 154220860,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103 154220975,154225213,154227359,154228725,154234792,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263503 Gene ID= ENSG00000143569.18 TPM= 6.11 Transcript Type= NA chr1 154220943 154263503 154220943 154263503 + transcript6186.chr1.nic@UBAP2L transcript6186.chr1.nic protein_coding 154220943,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103 154221040,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263503 Gene ID= ENSG00000143569.18 TPM= 23.32 Transcript Type= NA chr1 154221138 154263503 154221138 154263503 + transcript6191.chr1.nic@UBAP2L transcript6191.chr1.nic protein_coding 154221138,154225084,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154263103 154221396,154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154263503 Gene ID= ENSG00000143569.18 TPM= 11.55 Transcript Type= NA chr1 154225082 154270853 154225082 154270853 + ENST00000361546.6@UBAP2L ENST00000361546.6 protein_coding 154225082,154227282,154228615,154234591,154235196,154236566,154237024,154241513,154243217,154246204,154249239,154251041,154251481,154253900,154254836,154255152,154255683,154257063,154257346,154258977,154259948,154260892,154261592,154266501,154268757,154270200 154225213,154227359,154228725,154234759,154235291,154236611,154237136,154241565,154243302,154246375,154249437,154251318,154251653,154254089,154254890,154255326,154255755,154257258,154257434,154259030,154260029,154261109,154261697,154266568,154268954,154270853 Gene ID= ENSG00000143569.18 TPM= 3.92 Transcript Type= protein_coding chr1 154272511 154275875 154272511 154275875 + ENST00000328703.11@HAX1 ENST00000328703.11 protein_coding 154272511,154273336,154273774,154274950,154275154,154275393,154275616 154272776,154273598,154273961,154275001,154275260,154275483,154275875 Gene ID= ENSG00000143575.14 TPM= 76.97 Transcript Type= protein_coding chr1 154325525 154351303 154325525 154351303 + transcript6214.chr1.nic@ATP8B2 transcript6214.chr1.nic protein_coding 154325525,154328105,154330396,154330815,154331048,154331444,154331606,154331954,154332618,154334107,154334503,154337348,154340854,154342480,154342796,154343113,154343453,154343893,154344143,154344395,154344641,154344971,154345322,154345800,154346231,154346620,154348408,154348840 154325702,154328172,154330454,154330928,154331146,154331505,154331678,154332024,154332697,154334265,154334591,154337544,154341062,154342523,154342961,154343301,154343568,154344057,154344254,154344500,154344785,154345154,154345545,154345883,154346476,154346758,154348538,154351303 Gene ID= ENSG00000143515.16 TPM= 10.87 Transcript Type= NA chr1 154405193 154469450 154405193 154469450 + ENST00000368485.7@IL6R ENST00000368485.7 protein_coding 154405193,154429196,154430483,154434519,154434990,154435969,154448125,154449911,154454488,154465134 154405714,154429444,154430606,154434700,154435156,154436110,154448171,154449980,154454581,154469450 Gene ID= ENSG00000160712.12 TPM= 1.81 Transcript Type= protein_coding chr1 154469640 154502640 154469640 154502640 - transcript6230.chr1.nic@SHE transcript6230.chr1.nic protein_coding 154501436,154499112,154489051,154486527,154485943,154469640 154502640,154499238,154489356,154486683,154486062,154470362 Gene ID= ENSG00000169291.9 TPM= 14.94 Transcript Type= NA chr1 154479481 154502113 154479481 154502113 - ENST00000304760.2@SHE ENST00000304760.2 protein_coding 154501436,154499112,154489051,154486527,154485943,154479481 154502113,154499238,154489356,154486683,154486062,154484335 Gene ID= ENSG00000169291.9 TPM= 10.87 Transcript Type= protein_coding chr1 154548577 154558633 154548577 154558633 - ENST00000292211.4@UBE2Q1 ENST00000292211.4 protein_coding 154558227,154555860,154555428,154554735,154553032,154552736,154552404,154552093,154551921,154551771,154551397,154550938,154548577 154558633,154555964,154555532,154554785,154553172,154552820,154552464,154552183,154551979,154551819,154551492,154551004,154550469 Gene ID= ENSG00000160714.9 TPM= 72.44 Transcript Type= protein_coding chr1 154582062 154608206 154582062 154608206 - ENST00000368474.8@ADAR ENST00000368474.8 protein_coding 154607992,154601041,154598402,154597828,154597123,154596805,154590184,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582062 154608206,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043 Gene ID= ENSG00000160710.15 TPM= 32.6 Transcript Type= protein_coding chr1 154582062 154608191 154582062 154608191 - transcript6244.chr1.nic@ADAR transcript6244.chr1.nic protein_coding 154607992,154601041,154598402,154597828,154597123,154596805,154590262,154589757,154589369,154588551,154588125,154586181,154585753,154585217,154582062 154608191,154602626,154598585,154597976,154597267,154596995,154590409,154589928,154589462,154588673,154588258,154586363,154585865,154585344,154585043 Gene ID= ENSG00000160710.15 TPM= 22.64 Transcript Type= NA chr1 154924734 154936991 154924734 154936991 - ENST00000368467.3@PMVK ENST00000368467.3 protein_coding 154936591,154932352,154929024,154926354,154924734 154936991,154932415,154929176,154926483,154925265 Gene ID= ENSG00000163344.5 TPM= 157.56 Transcript Type= protein_coding chr1 154944056 154954000 154944056 154954000 - transcript6266.chr1.nic@PBXIP1 transcript6266.chr1.nic protein_coding 154953671,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944056 154954000,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117 Gene ID= ENSG00000163346.16 TPM= 93.11 Transcript Type= NA chr1 154944080 154956104 154944080 154956104 - ENST00000368463.7@PBXIP1 ENST00000368463.7 protein_coding 154956069,154953671,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944080 154956104,154953757,154951921,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117 Gene ID= ENSG00000163346.16 TPM= 631 Transcript Type= protein_coding chr1 154944076 154956121 154944076 154956121 - ENST00000368465.5@PBXIP1 ENST00000368465.5 protein_coding 154956069,154951795,154951471,154951232,154948133,154947982,154947642,154947417,154945572,154944076 154956121,154951919,154951535,154951397,154948366,154948005,154947712,154947548,154946803,154945117 Gene ID= ENSG00000163346.16 TPM= 25.19 Transcript Type= protein_coding chr1 154957019 154961789 154957019 154961789 - transcript6293.chr1.nnic@PYGO2 transcript6293.chr1.nnic protein_coding 154961474,154960977,154957019 154961789,154961112,154959846 Gene ID= ENSG00000163348.3 TPM= 1.81 Transcript Type= NA chr1 154957026 154961748 154957026 154961748 - ENST00000368457.2@PYGO2 ENST00000368457.2 protein_coding 154961474,154960977,154957026 154961748,154961026,154959846 Gene ID= ENSG00000163348.3 TPM= 60.67 Transcript Type= protein_coding chr1 154962286 154974376 154962286 154974376 - transcript6275.chr1.nic@SHC1 transcript6275.chr1.nic protein_coding 154974248,154973293,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962286 154974376,154973508,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931 Gene ID= ENSG00000160691.18 TPM= 5.89 Transcript Type= NA chr1 154962299 154970748 154962299 154970748 - transcript6287.chr1.nic@SHC1 transcript6287.chr1.nic protein_coding 154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965639,154962299 154970748,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931 Gene ID= ENSG00000160691.18 TPM= 2.56 Transcript Type= NA chr1 154962298 154974376 154962298 154974376 - ENST00000368450.5@SHC1 ENST00000368450.5 protein_coding 154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298 154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931 Gene ID= ENSG00000160691.18 TPM= 7.54 Transcript Type= protein_coding chr1 154962298 154974376 154962298 154974376 - ENST00000368453.8@SHC1 ENST00000368453.8 protein_coding 154974248,154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298 154974376,154970199,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931 Gene ID= ENSG00000160691.18 TPM= 15.85 Transcript Type= protein_coding chr1 154962298 154970747 154962298 154970747 - ENST00000448116.6@SHC1 ENST00000448116.6 protein_coding 154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298 154970747,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966080,154965781,154963931 Gene ID= ENSG00000160691.18 TPM= 24 Transcript Type= protein_coding chr1 154962298 154970741 154962298 154970741 - ENST00000368445.9@SHC1 ENST00000368445.9 protein_coding 154970032,154969378,154968771,154968495,154968204,154967980,154967671,154966319,154966162,154965946,154965543,154962298 154970741,154969448,154968834,154968614,154968257,154968031,154967797,154966517,154966231,154966077,154965781,154963931 Gene ID= ENSG00000160691.18 TPM= 17.5 Transcript Type= protein_coding chr1 154974699 154979249 154974699 154979249 + ENST00000308987.5@CKS1B ENST00000308987.5 protein_coding 154974699,154977987,154978725 154974804,154978114,154979249 Gene ID= ENSG00000173207.12 TPM= 20.37 Transcript Type= protein_coding chr1 154974653 154979248 154974653 154979248 + ENST00000368439.5@CKS1B ENST00000368439.5 protein_coding 154974653,154977987,154978725 154974912,154978114,154979248 Gene ID= ENSG00000173207.12 TPM= 1.36 Transcript Type= protein_coding chr1 154975531 154979241 154975531 154979241 + ENST00000474215.5@CKS1B ENST00000474215.5 protein_coding 154975531,154977987,154978725 154975624,154978114,154979241 Gene ID= ENSG00000173207.12 TPM= 1.81 Transcript Type= processed_transcript chr1 154983322 154989012 154983322 154989012 + transcript6306.chr1.nic@FLAD1 transcript6306.chr1.nic protein_coding 154983322,154983842,154988105 154983397,154984066,154989012 Gene ID= ENSG00000160688.18 TPM= 8.15 Transcript Type= NA chr1 154983359 154993111 154983359 154993111 + ENST00000315144.14@FLAD1 ENST00000315144.14 protein_coding 154983359,154983842,154988105,154989560,154990159,154990339,154992713,154992902 154983397,154984066,154988849,154989707,154990257,154990528,154992786,154993111 Gene ID= ENSG00000160688.18 TPM= 18.56 Transcript Type= protein_coding chr1 154983373 154993111 154983373 154993111 + ENST00000292180.7@FLAD1 ENST00000292180.7 protein_coding 154983373,154988105,154989560,154990159,154990339,154992713,154992902 154984066,154988849,154989707,154990257,154990528,154992786,154993111 Gene ID= ENSG00000160688.18 TPM= 2.26 Transcript Type= protein_coding chr1 155002627 155018524 155002627 155018524 + transcript6311.chr1.nnic@ZBTB7B transcript6311.chr1.nnic protein_coding 155002627,155002843,155010258,155014655,155016220 155002669,155002943,155010397,155015814,155018524 Gene ID= ENSG00000160685.13 TPM= 5.43 Transcript Type= NA chr1 155002627 155018524 155002627 155018524 + transcript6314.chr1.nnic@ZBTB7B transcript6314.chr1.nnic protein_coding 155002627,155002843,155014655,155016220 155002669,155002943,155015814,155018524 Gene ID= ENSG00000160685.13 TPM= 8.45 Transcript Type= NA chr1 155002630 155018522 155002630 155018522 + ENST00000535420.5@ZBTB7B ENST00000535420.5 protein_coding 155002630,155014655,155016220 155002943,155015814,155018522 Gene ID= ENSG00000160685.13 TPM= 5.28 Transcript Type= protein_coding chr1 155002657 155018522 155002657 155018522 + ENST00000368426.3@ZBTB7B ENST00000368426.3 protein_coding 155002657,155002843,155014655,155016220 155002686,155002943,155015814,155018522 Gene ID= ENSG00000160685.13 TPM= 10.71 Transcript Type= protein_coding chr1 155051258 155062796 155051258 155062796 + transcript6322.chr1.nic@ADAM15 transcript6322.chr1.nic protein_coding 155051258,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061418,155062245,155062460 155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062369,155062796 Gene ID= ENSG00000143537.13 TPM= 4.75 Transcript Type= NA chr1 155051319 155062796 155051319 155062796 + transcript6325.chr1.nnic@ADAM15 transcript6325.chr1.nnic protein_coding 155051319,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061307,155062245,155062460 155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155061105,155062117,155062369,155062796 Gene ID= ENSG00000143537.13 TPM= 2.04 Transcript Type= NA chr1 155051258 155062796 155051258 155062796 + transcript6329.chr1.nic@ADAM15 transcript6329.chr1.nic protein_coding 155051258,155052671,155053417,155053910,155054150,155054314,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062460 155051465,155052777,155053493,155053988,155054226,155054506,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062796 Gene ID= ENSG00000143537.13 TPM= 2.49 Transcript Type= NA chr1 155051306 155062775 155051306 155062775 + ENST00000271836.10@ADAM15 ENST00000271836.10 protein_coding 155051306,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155062245,155062460 155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155062369,155062775 Gene ID= ENSG00000143537.13 TPM= 41.43 Transcript Type= protein_coding chr1 155051286 155062758 155051286 155062758 + ENST00000355956.6@ADAM15 ENST00000355956.6 protein_coding 155051286,155052671,155053417,155053910,155054150,155054314,155055790,155055932,155056080,155056386,155056953,155057188,155057637,155057851,155058246,155058710,155059902,155060205,155060763,155061415,155062245,155062460 155051465,155052777,155053493,155053988,155054226,155054506,155055852,155056000,155056249,155056470,155057101,155057362,155057729,155058155,155058441,155058787,155059974,155060343,155060832,155061489,155062369,155062758 Gene ID= ENSG00000143537.13 TPM= 9.96 Transcript Type= protein_coding chr1 155063731 155069553 155063731 155069553 + ENST00000368409.7@EFNA4 ENST00000368409.7 protein_coding 155063731,155066730,155067372,155068853 155063936,155067016,155067440,155069553 Gene ID= ENSG00000243364.7 TPM= 8.15 Transcript Type= protein_coding chr1 155084989 155087530 155084989 155087530 + transcript6337.chr1.nic@AL691442.1 transcript6337.chr1.nic protein_coding 155084989,155085877,155086128,155086413 155085404,155085942,155086205,155087530 Gene ID= ENSG00000251246.1 TPM= 4.53 Transcript Type= NA chr1 155084989 155087530 155084989 155087530 + transcript6338.chr1.nic@EFNA3 transcript6338.chr1.nic protein_coding 155084989,155085877,155086413 155085404,155085942,155087530 Gene ID= ENSG00000143590.13 TPM= 2.72 Transcript Type= NA chr1 155127460 155134857 155127460 155134857 + ENST00000368407.7@EFNA1 ENST00000368407.7 protein_coding 155127460,155131339,155133503,155133730,155133955 155128069,155131634,155133568,155133780,155134857 Gene ID= ENSG00000169242.11 TPM= 81.05 Transcript Type= protein_coding chr1 155127876 155134857 155127876 155134857 + ENST00000368406.2@EFNA1 ENST00000368406.2 protein_coding 155127876,155131339,155133730,155133955 155128069,155131634,155133780,155134857 Gene ID= ENSG00000169242.11 TPM= 5.89 Transcript Type= protein_coding chr1 155135361 155138856 155135361 155138856 + transcript6346.chr1.nic@SLC50A1 transcript6346.chr1.nic protein_coding 155135361,155136299,155136828,155137561,155137979,155138180 155135692,155136376,155136951,155137722,155138098,155138856 Gene ID= ENSG00000169241.17 TPM= 2.4 Transcript Type= NA chr1 155135373 155138856 155135373 155138856 + transcript6347.chr1.nic@SLC50A1 transcript6347.chr1.nic protein_coding 155135373,155136299,155136828,155137561,155137979,155138180 155135598,155136376,155136951,155137722,155138098,155138856 Gene ID= ENSG00000169241.17 TPM= 2.4 Transcript Type= NA chr1 155135839 155138853 155135839 155138853 + transcript6349.chr1.nic@SLC50A1 transcript6349.chr1.nic protein_coding 155135839,155136299,155136828,155137561,155137979,155138162 155135991,155136376,155136951,155137722,155138098,155138853 Gene ID= ENSG00000169241.17 TPM= 3.85 Transcript Type= NA chr1 155135813 155138856 155135813 155138856 + transcript6351.chr1.nnic@SLC50A1 transcript6351.chr1.nnic protein_coding 155135813,155136299,155136828,155137561,155137979,155138180 155135972,155136376,155136951,155137722,155138098,155138856 Gene ID= ENSG00000169241.17 TPM= 2.4 Transcript Type= NA chr1 155135812 155138857 155135812 155138857 + ENST00000622581.4@SLC50A1 ENST00000622581.4 protein_coding 155135812,155136828,155137561,155137979,155138180 155135972,155136951,155137722,155138098,155138857 Gene ID= ENSG00000169241.17 TPM= 1.49 Transcript Type= protein_coding chr1 155135850 155138853 155135850 155138853 + ENST00000368404.8@SLC50A1 ENST00000368404.8 protein_coding 155135850,155136299,155136828,155137561,155137979,155138180 155135991,155136376,155136951,155137722,155138098,155138853 Gene ID= ENSG00000169241.17 TPM= 43.15 Transcript Type= protein_coding chr1 155135858 155138851 155135858 155138851 + ENST00000368401.5@SLC50A1 ENST00000368401.5 protein_coding 155135858,155136299,155137561,155137979,155138180 155135991,155136376,155137722,155138098,155138851 Gene ID= ENSG00000169241.17 TPM= 16.53 Transcript Type= protein_coding chr1 155135859 155138851 155135859 155138851 + ENST00000368405.7@SLC50A1 ENST00000368405.7 protein_coding 155135859,155136299,155137979,155138180 155135991,155136376,155138098,155138851 Gene ID= ENSG00000169241.17 TPM= 1.13 Transcript Type= processed_transcript chr1 155139891 155140595 155139891 155140595 - ENST00000341298.3@DPM3 ENST00000341298.3 protein_coding 155140491,155139891 155140595,155140271 Gene ID= ENSG00000179085.7 TPM= 18.56 Transcript Type= protein_coding chr1 155139891 155140544 155139891 155140544 - ENST00000368400.4@DPM3 ENST00000368400.4 protein_coding 155140491,155139891 155140544,155140245 Gene ID= ENSG00000179085.7 TPM= 45.73 Transcript Type= protein_coding chr1 155169408 155173333 155169408 155173333 - ENST00000295682.4@KRTCAP2 ENST00000295682.4 protein_coding 155173221,155172738,155172565,155169791,155169408 155173333,155172892,155172628,155169857,155169560 Gene ID= ENSG00000163463.11 TPM= 131.76 Transcript Type= protein_coding chr1 155169408 155173238 155169408 155173238 - ENST00000487350.5@KRTCAP2 ENST00000487350.5 protein_coding 155172738,155172565,155169791,155169408 155173238,155172628,155169857,155169560 Gene ID= ENSG00000163463.11 TPM= 4.98 Transcript Type= processed_transcript chr1 155195590 155209177 155195590 155209177 - transcript6370.chr1.nic@THBS3 transcript6370.chr1.nic protein_coding 155208906,155206200,155205060,155204855,155203513,155203223,155203086,155202812,155202261,155201957,155201417,155201094,155200897,155200451,155199995,155199804,155198409,155198042,155197880,155197463,155197041,155195987,155195590 155209177,155206406,155205316,155204957,155203539,155203305,155203137,155202960,155202401,155202034,155201569,155201204,155201004,155200610,155200113,155199856,155198602,155198220,155197928,155197659,155197213,155196126,155195899 Gene ID= ENSG00000169231.13 TPM= 8.6 Transcript Type= NA chr1 155195588 155207897 155195588 155207897 - ENST00000368378.7@THBS3 ENST00000368378.7 protein_coding 155207798,155206200,155205060,155204855,155203513,155203223,155203086,155202812,155202261,155201957,155201417,155201094,155200897,155200451,155199995,155199804,155198409,155198042,155197880,155197463,155197041,155195987,155195588 155207897,155206406,155205316,155204957,155203539,155203305,155203137,155202960,155202401,155202034,155201569,155201204,155201004,155200610,155200113,155199856,155198602,155198220,155197928,155197659,155197213,155196126,155195899 Gene ID= ENSG00000169231.13 TPM= 4.98 Transcript Type= protein_coding chr1 155209243 155213831 155209243 155213831 + transcript6378.chr1.nic@MTX1 transcript6378.chr1.nic protein_coding 155209243,155210346,155210548,155212385,155212694,155213484 155209332,155210415,155212219,155212567,155213391,155213831 Gene ID= ENSG00000173171.14 TPM= 1.81 Transcript Type= NA chr1 155209247 155213824 155209247 155213824 + ENST00000609421.1@MTX1 ENST00000609421.1 protein_coding 155209247,155210346,155210548,155212127,155212385,155212694,155213237,155213484 155209332,155210415,155210627,155212219,155212567,155212770,155213391,155213824 Gene ID= ENSG00000173171.14 TPM= 38.94 Transcript Type= protein_coding chr1 155231263 155244699 155231263 155244699 - transcript6379.chr1.nnic@GBA transcript6379.chr1.nnic protein_coding 155244506,155244095,155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155231263 155244699,155244233,155241161,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100 Gene ID= ENSG00000177628.15 TPM= 6.09 Transcript Type= NA chr1 155231263 155244664 155231263 155244664 - transcript6382.chr1.nnic@GBA transcript6382.chr1.nnic protein_coding 155244506,155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155231263 155244664,155241161,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100 Gene ID= ENSG00000177628.15 TPM= 7.91 Transcript Type= NA chr1 155234452 155244670 155234452 155244670 - ENST00000327247.9@GBA ENST00000327247.9 protein_coding 155244506,155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452 155244670,155241180,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100 Gene ID= ENSG00000177628.15 TPM= 26.62 Transcript Type= protein_coding chr1 155234452 155241234 155234452 155241234 - ENST00000368373.7@GBA ENST00000368373.7 protein_coding 155241086,155240630,155239886,155239616,155238517,155238134,155237341,155236245,155235681,155235195,155234452 155241234,155240717,155240077,155239762,155238650,155238306,155237578,155236469,155235844,155235311,155235100 Gene ID= ENSG00000177628.15 TPM= 34.77 Transcript Type= protein_coding chr1 155247205 155255472 155247205 155255472 - transcript6391.chr1.nic@FAM189B transcript6391.chr1.nic protein_coding 155254653,155254400,155253625,155251733,155251502,155251095,155250276,155248405,155248050,155247205 155255472,155254456,155253732,155251905,155251601,155251164,155250821,155248473,155248303,155247955 Gene ID= ENSG00000160767.20 TPM= 11.77 Transcript Type= NA chr1 155247217 155255387 155247217 155255387 - ENST00000361361.6@FAM189B ENST00000361361.6 protein_coding 155254653,155254400,155254084,155253859,155253625,155251733,155251502,155251095,155250276,155248405,155248050,155247217 155255387,155254456,155254194,155253978,155253732,155251905,155251601,155251164,155250821,155248473,155248303,155247955 Gene ID= ENSG00000160767.20 TPM= 7.24 Transcript Type= protein_coding chr1 155255980 155262255 155255980 155262255 - transcript6399.chr1.nnic@SCAMP3 transcript6399.chr1.nnic protein_coding 155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255980 155262255,155261734,155260659,155260450,155258912,155257657,155257386,155256791,155256419 Gene ID= ENSG00000116521.10 TPM= 10.87 Transcript Type= NA chr1 155255981 155262430 155255981 155262430 - ENST00000355379.3@SCAMP3 ENST00000355379.3 protein_coding 155262086,155260537,155260330,155258826,155257498,155257285,155256674,155255981 155262430,155260659,155260450,155258954,155257657,155257386,155256791,155256419 Gene ID= ENSG00000116521.10 TPM= 9.06 Transcript Type= protein_coding chr1 155255979 155262259 155255979 155262259 - ENST00000302631.7@SCAMP3 ENST00000302631.7 protein_coding 155262086,155261657,155260537,155260330,155258826,155257498,155257285,155256674,155255979 155262259,155261734,155260659,155260450,155258954,155257657,155257386,155256791,155256419 Gene ID= ENSG00000116521.10 TPM= 83.31 Transcript Type= protein_coding chr1 155262868 155273516 155262868 155273516 - ENST00000368361.8@CLK2 ENST00000368361.8 protein_coding 155273201,155270808,155269488,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262868 155273516,155270977,155269716,155268795,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400 Gene ID= ENSG00000176444.18 TPM= 40.3 Transcript Type= protein_coding chr1 155262870 155273512 155262870 155273512 - transcript6412.chr1.nnic@CLK2 transcript6412.chr1.nnic protein_coding 155273201,155270808,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155263573,155262870 155273512,155270977,155269716,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263708,155263400 Gene ID= ENSG00000176444.18 TPM= 2.72 Transcript Type= NA chr1 155262868 155273512 155262868 155273512 - transcript6414.chr1.nic@CLK2 transcript6414.chr1.nic protein_coding 155273201,155270808,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262868 155273512,155270977,155269716,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400 Gene ID= ENSG00000176444.18 TPM= 19.02 Transcript Type= NA chr1 155262868 155273512 155262868 155273512 - transcript6419.chr1.nnic@CLK2 transcript6419.chr1.nnic protein_coding 155273201,155270808,155268293,155268010,155264645,155264468,155264221,155263950,155262868 155273512,155270977,155269716,155268126,155264774,155264550,155264300,155264040,155263400 Gene ID= ENSG00000176444.18 TPM= 1.81 Transcript Type= NA chr1 155262874 155273482 155262874 155273482 - ENST00000355560.4@CLK2 ENST00000355560.4 protein_coding 155273201,155270808,155269488,155268708,155268293,155268010,155266729,155265860,155264645,155264468,155264221,155263950,155262874 155273482,155270977,155269713,155268792,155268359,155268126,155266895,155265954,155264774,155264550,155264300,155264040,155263400 Gene ID= ENSG00000176444.18 TPM= 2.26 Transcript Type= protein_coding chr1 155277453 155289846 155277453 155289846 + transcript6422.chr1.nic@HCN3 transcript6422.chr1.nic protein_coding 155277453,155282411,155283974,155285165,155285724,155287173,155287781 155277868,155282840,155284757,155285311,155285964,155287337,155289846 Gene ID= ENSG00000143630.9 TPM= 1.81 Transcript Type= NA chr1 155308852 155320665 155308852 155320665 + ENST00000368356.8@FDPS ENST00000368356.8 protein_coding 155308852,155309789,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409 155308965,155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665 Gene ID= ENSG00000160752.14 TPM= 8.03 Transcript Type= protein_coding chr1 155308916 155320665 155308916 155320665 + ENST00000356657.10@FDPS ENST00000356657.10 protein_coding 155308916,155309789,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409 155309076,155309965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320665 Gene ID= ENSG00000160752.14 TPM= 3.5 Transcript Type= protein_coding chr1 155308748 155320666 155308748 155320666 + ENST00000611010.4@FDPS ENST00000611010.4 protein_coding 155308748,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409 155308965,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320666 Gene ID= ENSG00000160752.14 TPM= 1.54 Transcript Type= protein_coding chr1 155308813 155310972 155308813 155310972 + transcript6450.chr1.nnic@FDPS transcript6450.chr1.nnic protein_coding 155308813,155310064,155310336,155310547 155308965,155310205,155310453,155310972 Gene ID= ENSG00000160752.14 TPM= 2.72 Transcript Type= NA chr1 155308794 155320609 155308794 155320609 + ENST00000447866.5@FDPS ENST00000447866.5 protein_coding 155308794,155310043,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409 155308965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320609 Gene ID= ENSG00000160752.14 TPM= 1.06 Transcript Type= protein_coding chr1 155308889 155320647 155308889 155320647 + ENST00000467076.5@FDPS ENST00000467076.5 protein_coding 155308889,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409 155308965,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320647 Gene ID= ENSG00000160752.14 TPM= 34.56 Transcript Type= protein_coding chr1 155308970 155320637 155308970 155320637 + ENST00000612683.1@FDPS ENST00000612683.1 protein_coding 155308970,155310064,155312255,155317941,155318169,155318665,155318856,155319611,155319794,155320409 155309076,155310205,155312395,155318021,155318291,155318753,155318928,155319688,155319928,155320637 Gene ID= ENSG00000160752.14 TPM= 4.68 Transcript Type= protein_coding chr1 155320908 155331119 155320908 155331119 + transcript6428.chr1.nnic@RUSC1 transcript6428.chr1.nnic protein_coding 155320908,155321688,155323402,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155320991,155323130,155323812,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331119 Gene ID= ENSG00000160753.15 TPM= 4.96 Transcript Type= NA chr1 155320908 155331119 155320908 155331119 + transcript6436.chr1.nnic@RUSC1 transcript6436.chr1.nnic protein_coding 155320908,155321688,155323402,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155320991,155323130,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331119 Gene ID= ENSG00000160753.15 TPM= 8.58 Transcript Type= NA chr1 155323966 155331119 155323966 155331119 + transcript6442.chr1.nic@RUSC1 transcript6442.chr1.nic protein_coding 155323966,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155324364,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331119 Gene ID= ENSG00000160753.15 TPM= 2.84 Transcript Type= NA chr1 155320927 155331114 155320927 155331114 + ENST00000368352.9@RUSC1 ENST00000368352.9 protein_coding 155320927,155321688,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155320991,155323130,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114 Gene ID= ENSG00000160753.15 TPM= 2.25 Transcript Type= protein_coding chr1 155323937 155331114 155323937 155331114 + ENST00000368347.8@RUSC1 ENST00000368347.8 protein_coding 155323937,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155324544,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331114 Gene ID= ENSG00000160753.15 TPM= 3.75 Transcript Type= protein_coding chr1 155324513 155331112 155324513 155331112 + ENST00000368349.8@RUSC1 ENST00000368349.8 protein_coding 155324513,155324845,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155324587,155324943,155325178,155325490,155325672,155325910,155327132,155328275,155331112 Gene ID= ENSG00000160753.15 TPM= 4.65 Transcript Type= protein_coding chr1 155324522 155330730 155324522 155330730 + ENST00000490373.5@RUSC1 ENST00000490373.5 protein_coding 155324522,155325102,155325316,155325567,155325864,155326580,155328150,155330403 155324809,155325178,155325490,155325672,155325910,155327132,155328275,155330730 Gene ID= ENSG00000160753.15 TPM= 1.94 Transcript Type= protein_coding chr1 155324539 155331114 155324539 155331114 + ENST00000471876.5@RUSC1 ENST00000471876.5 protein_coding 155324539,155325102,155325316,155325567,155325864,155326898,155328150,155330403 155324809,155325178,155325490,155325672,155325910,155327132,155328275,155331114 Gene ID= ENSG00000160753.15 TPM= 2.72 Transcript Type= protein_coding chr1 155562073 155563944 155562073 155563944 + ENST00000452809.1@ASH1L-AS1 ENST00000452809.1 antisense_RNA 155562073,155563250 155562286,155563944 Gene ID= ENSG00000235919.4 TPM= 1.81 Transcript Type= antisense_RNA chr1 155610197 155614947 155610197 155614947 + transcript6455.chr1.nic@MSTO1 transcript6455.chr1.nic protein_coding 155610197,155610425,155611039,155611216,155611549,155611689,155611983,155612182,155612418,155612844,155613049,155613462,155613657,155614059 155610332,155610560,155611108,155611291,155611603,155611827,155612100,155612316,155612570,155612975,155613233,155613566,155613733,155614947 Gene ID= ENSG00000125459.14 TPM= 6.34 Transcript Type= NA chr1 155610225 155614967 155610225 155614967 + ENST00000245564.6@MSTO1 ENST00000245564.6 protein_coding 155610225,155610425,155611039,155611216,155611549,155611689,155611983,155612182,155612418,155612844,155613049,155613462,155613657,155614059 155610332,155610560,155611108,155611291,155611603,155611827,155612100,155612316,155612570,155612975,155613233,155613566,155613766,155614967 Gene ID= ENSG00000125459.14 TPM= 14.49 Transcript Type= protein_coding chr1 155659447 155688775 155659447 155688775 - transcript6488.chr1.nic@YY1AP1 transcript6488.chr1.nic protein_coding 155688659,155688071,155680416,155679409,155676548,155675010,155672521,155670320,155668627,155661307,155659447 155688775,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913 Gene ID= ENSG00000163374.19 TPM= 3.8 Transcript Type= NA chr1 155659455 155688775 155659455 155688775 - transcript6505.chr1.nic@YY1AP1 transcript6505.chr1.nic protein_coding 155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155659455 155688775,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423 Gene ID= ENSG00000163374.19 TPM= 3.8 Transcript Type= NA chr1 155659443 155688656 155659443 155688656 - ENST00000368339.9@YY1AP1 ENST00000368339.9 protein_coding 155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659443 155688656,155680456,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913 Gene ID= ENSG00000163374.19 TPM= 4.26 Transcript Type= protein_coding chr1 155659446 155688757 155659446 155688757 - ENST00000404643.5@YY1AP1 ENST00000404643.5 protein_coding 155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446 155688757,155688201,155680456,155679512,155676746,155675096,155672731,155670464,155668717,155661423,155660913 Gene ID= ENSG00000163374.19 TPM= 32.78 Transcript Type= protein_coding chr1 155659446 155688748 155659446 155688748 - ENST00000361140.8@YY1AP1 ENST00000361140.8 protein_coding 155688659,155688071,155680416,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446 155688748,155688201,155680456,155679512,155676746,155675096,155672727,155670464,155668777,155661423,155660913 Gene ID= ENSG00000163374.19 TPM= 12.86 Transcript Type= nonsense_mediated_decay chr1 155659446 155688705 155659446 155688705 - ENST00000361831.9@YY1AP1 ENST00000361831.9 protein_coding 155688659,155688071,155680416,155679928,155679409,155676548,155675010,155672560,155670320,155668627,155661307,155659446 155688705,155688201,155680456,155680008,155679512,155676746,155675096,155672731,155670464,155668777,155661423,155660913 Gene ID= ENSG00000163374.19 TPM= 1.09 Transcript Type= protein_coding chr1 155687939 155738971 155687939 155738971 + transcript6470.chr1.nic@DAP3 transcript6470.chr1.nic protein_coding 155687939,155689095,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155688192,155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738971 Gene ID= ENSG00000132676.15 TPM= 4.06 Transcript Type= NA chr1 155687939 155738971 155687939 155738971 + transcript6471.chr1.nic@DAP3 transcript6471.chr1.nic protein_coding 155687939,155689095,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155688192,155689243,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738971 Gene ID= ENSG00000132676.15 TPM= 2.25 Transcript Type= NA chr1 155689051 155738527 155689051 155738527 + transcript6473.chr1.nic@DAP3 transcript6473.chr1.nic protein_coding 155689051,155709033,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155689174,155709125,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738527 Gene ID= ENSG00000132676.15 TPM= 4.06 Transcript Type= NA chr1 155687943 155738527 155687943 155738527 + transcript6474.chr1.nnic@DAP3 transcript6474.chr1.nnic protein_coding 155687943,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155688192,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738527 Gene ID= ENSG00000132676.15 TPM= 3.15 Transcript Type= NA chr1 155689051 155738971 155689051 155738971 + transcript6486.chr1.nic@DAP3 transcript6486.chr1.nic protein_coding 155689051,155709773,155717006,155721517,155725382,155725927,155727608,155729208,155731356,155731944,155736946,155738157 155689243,155709824,155717128,155721618,155725490,155726019,155727738,155729366,155731415,155732033,155737063,155738971 Gene ID= ENSG00000132676.15 TPM= 1.81 Transcript Type= NA chr1 155689091 155738526 155689091 155738526 + ENST00000421487.6@DAP3 ENST00000421487.6 protein_coding 155689091,155709773,155717006,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155689174,155709824,155717128,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526 Gene ID= ENSG00000132676.15 TPM= 1.03 Transcript Type= protein_coding chr1 155689058 155739010 155689058 155739010 + ENST00000368336.9@DAP3 ENST00000368336.9 protein_coding 155689058,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155689174,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155739010 Gene ID= ENSG00000132676.15 TPM= 40.28 Transcript Type= protein_coding chr1 155689083 155738526 155689083 155738526 + ENST00000343043.7@DAP3 ENST00000343043.7 protein_coding 155689083,155709773,155717006,155721517,155725382,155725927,155727608,155729042,155729208,155731356,155731944,155736946,155738157 155689243,155709824,155717128,155721618,155725490,155726019,155727738,155729122,155729366,155731415,155732033,155737063,155738526 Gene ID= ENSG00000132676.15 TPM= 15.83 Transcript Type= protein_coding chr1 155749717 155859400 155749717 155859400 - ENST00000437809.5@GON4L ENST00000437809.5 protein_coding 155859304,155853276,155826837,155822286,155821474,155820606,155816212,155815805,155814330,155813634,155804949,155795050,155785334,155783986,155777622,155776395,155775002,155773066,155771067,155767425,155765000,155763312,155762190,155760444,155757891,155757180,155756958,155754375,155753204,155751960,155751767,155749717 155859400,155853806,155827028,155822476,155821548,155820656,155816262,155815900,155814449,155813804,155805141,155795151,155785374,155784089,155777820,155776481,155775173,155773210,155771217,155767541,155766709,155763564,155762374,155760641,155758034,155757323,155757077,155754488,155753414,155752587,155751869,155750733 Gene ID= ENSG00000116580.18 TPM= 4.53 Transcript Type= protein_coding chr1 155897808 155911404 155897808 155911404 - ENST00000368323.7@RIT1 ENST00000368323.7 protein_coding 155911243,155910656,155910450,155904731,155904311,155897808 155911404,155910804,155910506,155904804,155904502,155900618 Gene ID= ENSG00000143622.10 TPM= 16.3 Transcript Type= protein_coding chr1 155913043 155934412 155913043 155934412 - transcript6523.chr1.nnic@KIAA0907 transcript6523.chr1.nnic protein_coding 155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043 155934412,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921524,155917672,155916709,155915964,155914320 Gene ID= ENSG00000132680.10 TPM= 2.72 Transcript Type= NA chr1 155913043 155934412 155913043 155934412 - transcript6524.chr1.nic@KIAA0907 transcript6524.chr1.nic protein_coding 155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043 155934412,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921628,155917672,155916709,155915964,155914320 Gene ID= ENSG00000132680.10 TPM= 2.72 Transcript Type= NA chr1 155913045 155934412 155913045 155934412 - transcript6527.chr1.nnic@KIAA0907 transcript6527.chr1.nnic protein_coding 155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155913045 155934412,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921524,155917672,155916709,155915964 Gene ID= ENSG00000132680.10 TPM= 5.43 Transcript Type= NA chr1 155913043 155934397 155913043 155934397 - ENST00000368321.7@KIAA0907 ENST00000368321.7 protein_coding 155934336,155933633,155929712,155929296,155927104,155926676,155925632,155923627,155921861,155921375,155917499,155916625,155915873,155913043 155934397,155933849,155929840,155929375,155927156,155926839,155925843,155923687,155921918,155921628,155917672,155916737,155915964,155914320 Gene ID= ENSG00000132680.10 TPM= 10.87 Transcript Type= protein_coding chr1 156035302 156053776 156035302 156053776 - transcript6531.chr1.nnic@UBQLN4 transcript6531.chr1.nnic protein_coding 156053594,156051706,156051110,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035302 156053776,156051793,156051327,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130 Gene ID= ENSG00000160803.7 TPM= 1.81 Transcript Type= NA chr1 156035301 156053794 156035301 156053794 - ENST00000368309.3@UBQLN4 ENST00000368309.3 protein_coding 156053594,156051706,156051110,156050291,156048501,156043998,156042774,156042153,156041872,156041485,156035301 156053794,156051857,156051327,156050553,156048659,156044223,156042913,156042236,156041987,156041671,156037130 Gene ID= ENSG00000160803.7 TPM= 28.07 Transcript Type= protein_coding chr1 156054752 156058510 156054752 156058510 + ENST00000368305.8@LAMTOR2 ENST00000368305.8 protein_coding 156054752,156055263,156057978,156058315 156054957,156055425,156058067,156058510 Gene ID= ENSG00000116586.11 TPM= 115.91 Transcript Type= protein_coding chr1 156114707 156140089 156114707 156140089 + ENST00000368300.8@LMNA ENST00000368300.8 protein_coding 156114707,156130617,156134403,156134805,156135187,156135901,156136214,156136921,156137113,156137654,156138488,156139080 156115274,156130773,156134528,156134975,156135312,156136121,156136436,156137028,156137232,156137743,156138757,156140089 Gene ID= ENSG00000160789.19 TPM= 662.86 Transcript Type= protein_coding chr1 156154371 156177752 156154371 156177752 + ENST00000368282.1@SEMA4A ENST00000368282.1 protein_coding 156154371,156156414,156158070,156158388,156158719,156160443,156160905,156161346,156162944,156172826,156174822,156175086,156175556,156176405 156154717,156156574,156158132,156158486,156158824,156160559,156161029,156161518,156163094,156173006,156174940,156175243,156175656,156177752 Gene ID= ENSG00000196189.12 TPM= 2.72 Transcript Type= protein_coding chr1 156194112 156212795 156194112 156212795 + transcript6551.chr1.nnic@SLC25A44 transcript6551.chr1.nnic protein_coding 156194112,156196013,156199835,156207886,156210240 156194247,156196173,156200472,156208013,156212795 Gene ID= ENSG00000160785.13 TPM= 4.98 Transcript Type= NA chr1 156194089 156212796 156194089 156212796 + ENST00000359511.4@SLC25A44 ENST00000359511.4 protein_coding 156194089,156199835,156207886,156210240 156194247,156200472,156208013,156212796 Gene ID= ENSG00000160785.13 TPM= 24.9 Transcript Type= protein_coding chr1 156212982 156243332 156212982 156243332 + ENST00000490491.5@PMF1-BGLAP ENST00000490491.5 protein_coding 156212982,156232320,156233628,156236288,156242553,156242762,156243033 156213176,156232425,156233728,156236483,156242591,156242831,156243332 Gene ID= ENSG00000260238.6 TPM= 7.24 Transcript Type= protein_coding chr1 156213007 156240042 156213007 156240042 + ENST00000368277.3@PMF1 ENST00000368277.3 protein_coding 156213007,156232320,156233628,156236288,156239548 156213176,156232425,156233728,156236483,156240042 Gene ID= ENSG00000160783.19 TPM= 61.58 Transcript Type= protein_coding chr1 156249224 156282855 156249224 156282855 - transcript6568.chr1.nnic@SMG5 transcript6568.chr1.nnic protein_coding 156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156251403,156250858,156249224 156282855,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250996,156250670 Gene ID= ENSG00000198952.8 TPM= 7.24 Transcript Type= NA chr1 156249224 156282855 156249224 156282855 - transcript6572.chr1.nic@SMG5 transcript6572.chr1.nic protein_coding 156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156250858,156249224 156282855,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250670 Gene ID= ENSG00000198952.8 TPM= 10.87 Transcript Type= NA chr1 156249224 156282825 156249224 156282825 - ENST00000361813.5@SMG5 ENST00000361813.5 protein_coding 156282607,156278936,156277925,156277085,156274597,156273361,156272320,156268290,156268115,156267470,156266541,156265781,156263395,156261333,156260451,156259005,156253449,156252919,156252414,156251403,156250858,156249224 156282825,156279034,156278048,156277241,156274686,156273450,156272398,156268415,156268183,156267678,156266678,156266380,156263570,156261408,156260626,156259163,156253508,156253078,156252504,156251477,156250996,156250670 Gene ID= ENSG00000198952.8 TPM= 176.58 Transcript Type= protein_coding chr1 156282924 156292444 156282924 156292444 + transcript6595.chr1.nic@TMEM79 transcript6595.chr1.nic protein_coding 156282924,156285184,156291385 156283065,156286473,156292444 Gene ID= ENSG00000163472.18 TPM= 4.07 Transcript Type= NA chr1 156282948 156292443 156282948 156292443 + ENST00000295694.9@TMEM79 ENST00000295694.9 protein_coding 156282948,156285184,156286260,156291385 156283065,156285983,156286473,156292443 Gene ID= ENSG00000163472.18 TPM= 13.13 Transcript Type= protein_coding chr1 156290092 156295719 156290092 156295719 - transcript6584.chr1.nic@GLMP transcript6584.chr1.nic protein_coding 156295526,156294759,156294365,156294018,156293320,156290092 156295719,156295016,156294565,156294236,156293429,156293209 Gene ID= ENSG00000198715.11 TPM= 5.43 Transcript Type= NA chr1 156290092 156295685 156290092 156295685 - transcript6585.chr1.nnic@GLMP transcript6585.chr1.nnic protein_coding 156295526,156294676,156294365,156294018,156293320,156290092 156295685,156294759,156294565,156294236,156293576,156293209 Gene ID= ENSG00000198715.11 TPM= 7.54 Transcript Type= NA chr1 156292688 156295672 156292688 156295672 - ENST00000362007.5@GLMP ENST00000362007.5 protein_coding 156295526,156294759,156294365,156294018,156293320,156292688 156295672,156295016,156294565,156294236,156293576,156293209 Gene ID= ENSG00000198715.11 TPM= 115.91 Transcript Type= protein_coding chr1 156292687 156295689 156292687 156295689 - ENST00000612353.4@GLMP ENST00000612353.4 protein_coding 156295526,156294759,156294365,156294018,156292687 156295689,156295016,156294565,156294236,156293209 Gene ID= ENSG00000198715.11 TPM= 5.13 Transcript Type= protein_coding chr1 156292687 156295689 156292687 156295689 - ENST00000622703.4@GLMP ENST00000622703.4 protein_coding 156295526,156294365,156294018,156293320,156292687 156295689,156294565,156294236,156293576,156293209 Gene ID= ENSG00000198715.11 TPM= 18.11 Transcript Type= protein_coding chr1 156308968 156338465 156308968 156338465 - ENST00000295688.7@CCT3 ENST00000295688.7 protein_coding 156338154,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308968 156338465,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303 Gene ID= ENSG00000163468.14 TPM= 466.96 Transcript Type= protein_coding chr1 156309014 156338247 156309014 156338247 - ENST00000368262.7@CCT3 ENST00000368262.7 protein_coding 156338154,156337079,156335827,156334868,156334713,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156309014 156338247,156337240,156335888,156334918,156334775,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303 Gene ID= ENSG00000163468.14 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr1 156308969 156338245 156308969 156338245 - ENST00000368259.6@CCT3 ENST00000368259.6 protein_coding 156338154,156335827,156333547,156324972,156320839,156318868,156317415,156317166,156312041,156310950,156310558,156308969 156338245,156335888,156333643,156325089,156321025,156319017,156317547,156317247,156312221,156311195,156310689,156309303 Gene ID= ENSG00000163468.14 TPM= 6.04 Transcript Type= protein_coding chr1 156466218 156500824 156466218 156500824 - transcript6618.chr1.nnic@MEF2D transcript6618.chr1.nnic protein_coding 156500486,156495153,156483239,156482437,156480834,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156466218 156500824,156495266,156483430,156482640,156480971,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656 Gene ID= ENSG00000116604.17 TPM= 3.62 Transcript Type= NA chr1 156463727 156500828 156463727 156500828 - ENST00000348159.8@MEF2D ENST00000348159.8 protein_coding 156500486,156483239,156482437,156480834,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156463727 156500828,156483430,156482640,156480971,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656 Gene ID= ENSG00000116604.17 TPM= 58.86 Transcript Type= protein_coding chr1 156466211 156499934 156466211 156499934 - transcript6622.chr1.nnic@MEF2D transcript6622.chr1.nnic protein_coding 156499835,156483239,156482437,156480834,156479586,156479290,156477012,156476494,156475108,156468780,156467993,156466211 156499934,156483430,156482640,156480971,156479796,156479346,156477202,156476514,156475237,156469020,156468299,156467656 Gene ID= ENSG00000116604.17 TPM= 7.7 Transcript Type= NA chr1 156466216 156500825 156466216 156500825 - transcript6625.chr1.nic@MEF2D transcript6625.chr1.nic protein_coding 156500486,156483239,156482437,156480834,156479586,156479290,156477012,156476494,156475108,156468780,156466216 156500825,156483430,156482640,156480971,156479796,156479346,156477202,156476514,156475237,156469020,156468299 Gene ID= ENSG00000116604.17 TPM= 17.66 Transcript Type= NA chr1 156591762 156594299 156591762 156594299 + ENST00000368235.7@NAXE ENST00000368235.7 protein_coding 156591762,156592101,156592365,156592557,156593408,156593882 156591986,156592209,156592475,156592670,156593555,156594299 Gene ID= ENSG00000163382.11 TPM= 169.94 Transcript Type= protein_coding chr1 156594487 156601483 156594487 156601483 - ENST00000368232.8@GPATCH4 ENST00000368232.8 protein_coding 156601409,156598968,156598421,156598227,156598035,156596387,156596081,156594487 156601483,156599104,156598494,156598319,156598121,156596478,156596131,156595849 Gene ID= ENSG00000160818.16 TPM= 24.45 Transcript Type= protein_coding chr1 156668763 156677397 156668763 156677397 - ENST00000368223.3@NES ENST00000368223.3 protein_coding 156676482,156675216,156673454,156668763 156677397,156675340,156673527,156673205 Gene ID= ENSG00000132688.10 TPM= 4.53 Transcript Type= protein_coding chr1 156699618 156705816 156699618 156705816 - ENST00000621784.4@CRABP2 ENST00000621784.4 protein_coding 156705709,156705377,156700874,156700542,156699618 156705816,156705546,156701052,156700658,156700076 Gene ID= ENSG00000143320.8 TPM= 1.36 Transcript Type= protein_coding chr1 156699606 156705601 156699606 156705601 - ENST00000368222.7@CRABP2 ENST00000368222.7 protein_coding 156705377,156700874,156700542,156699606 156705601,156701052,156700658,156700076 Gene ID= ENSG00000143320.8 TPM= 4.98 Transcript Type= protein_coding chr1 156721851 156728448 156721851 156728448 - transcript6657.chr1.nic@ISG20L2 transcript6657.chr1.nic protein_coding 156728354,156726906,156724148,156721851 156728448,156727769,156724348,156723462 Gene ID= ENSG00000143319.16 TPM= 3.17 Transcript Type= NA chr1 156721851 156728455 156721851 156728455 - transcript6659.chr1.nic@ISG20L2 transcript6659.chr1.nic protein_coding 156728415,156726906,156724148,156721851 156728455,156727808,156724348,156723462 Gene ID= ENSG00000143319.16 TPM= 5.89 Transcript Type= NA chr1 156721891 156728435 156721891 156728435 - ENST00000313146.10@ISG20L2 ENST00000313146.10 protein_coding 156726906,156724148,156721891 156728435,156724348,156723462 Gene ID= ENSG00000143319.16 TPM= 19.92 Transcript Type= protein_coding chr1 156728461 156736957 156728461 156736957 + transcript6646.chr1.nic@RRNAD1 transcript6646.chr1.nic protein_coding 156728461,156731991,156732281,156732985,156733377,156734009,156735725,156736632 156729215,156732115,156732473,156733047,156733520,156734052,156735909,156736957 Gene ID= ENSG00000143303.11 TPM= 2.42 Transcript Type= NA chr1 156728442 156736949 156728442 156736949 + ENST00000368218.8@RRNAD1 ENST00000368218.8 protein_coding 156728442,156731991,156732281,156732985,156733377,156735725,156736632 156729215,156732115,156732473,156733047,156733520,156735909,156736949 Gene ID= ENSG00000143303.11 TPM= 4.23 Transcript Type= protein_coding chr1 156728475 156736949 156728475 156736949 + ENST00000368216.8@RRNAD1 ENST00000368216.8 protein_coding 156728475,156731991,156732281,156732985,156733377,156734009,156735725,156736632 156729215,156732115,156732473,156733047,156733520,156734493,156735909,156736949 Gene ID= ENSG00000143303.11 TPM= 7.85 Transcript Type= protein_coding chr1 156737305 156741131 156737305 156741131 - ENST00000368211.8@MRPL24 ENST00000368211.8 protein_coding 156741053,156738522,156738343,156738031,156737646,156737305 156741131,156738764,156738438,156738134,156737776,156737534 Gene ID= ENSG00000143314.12 TPM= 62.03 Transcript Type= protein_coding chr1 156737303 156741088 156737303 156741088 - ENST00000361531.6@MRPL24 ENST00000361531.6 protein_coding 156741012,156738522,156738343,156738031,156737646,156737303 156741088,156738764,156738438,156738134,156737776,156737534 Gene ID= ENSG00000143314.12 TPM= 41.2 Transcript Type= protein_coding chr1 156742107 156751744 156742107 156751744 - ENST00000357325.9@HDGF ENST00000357325.9 protein_coding 156751343,156745297,156745008,156744163,156743652,156742107 156751744,156745373,156745146,156744348,156743878,156743455 Gene ID= ENSG00000143321.18 TPM= 240.58 Transcript Type= protein_coding chr1 156767500 156800817 156767500 156800817 + ENST00000271526.8@PRCC ENST00000271526.8 protein_coding 156767500,156782282,156786608,156791697,156794665,156797276,156800374 156768239,156782329,156787174,156791792,156794808,156797341,156800817 Gene ID= ENSG00000143294.14 TPM= 89.65 Transcript Type= protein_coding chr1 156893720 156916429 156893720 156916429 + ENST00000338302.7@PEAR1 ENST00000338302.7 protein_coding 156893720,156902188,156903918,156904748,156905324,156906276,156906637,156907610,156907915,156908128,156908655,156908916,156909751,156910006,156910234,156910618,156912247,156912494,156912770,156913194,156913391,156913692,156913852,156914647 156893837,156902285,156904027,156904852,156905424,156906368,156906880,156907730,156908051,156908340,156908829,156909036,156909914,156910108,156910380,156910743,156912375,156912622,156912982,156913282,156913523,156913760,156914100,156916429 Gene ID= ENSG00000187800.13 TPM= 7.24 Transcript Type= protein_coding chr1 156934841 156942657 156934841 156942657 - transcript6695.chr1.nic@ARHGEF11 transcript6695.chr1.nic protein_coding 156941864,156941372,156940207,156938418,156937249,156936816,156934841 156942657,156941433,156940425,156939910,156937496,156937005,156936058 Gene ID= ENSG00000132694.18 TPM= 7.24 Transcript Type= NA chr1 158092366 158100261 158092366 158100261 + transcript6704.chr1.nnic@KIRREL1 transcript6704.chr1.nnic protein_coding 158092366,158093623,158094311,158094644 158093446,158093762,158094390,158100261 Gene ID= ENSG00000183853.17 TPM= 13.58 Transcript Type= NA chr1 158088503 158093326 158088503 158093326 + transcript6705.chr1.nic@KIRREL1 transcript6705.chr1.nic protein_coding 158088503,158089718,158091358 158089628,158089818,158093326 Gene ID= ENSG00000183853.17 TPM= 7.24 Transcript Type= NA chr1 158092366 158100261 158092366 158100261 + transcript6706.chr1.nnic@KIRREL1 transcript6706.chr1.nnic protein_coding 158092366,158094311,158094644 158093762,158094390,158100261 Gene ID= ENSG00000183853.17 TPM= 10.87 Transcript Type= NA chr1 158179947 158184896 158179947 158184896 + ENST00000368171.3@CD1D ENST00000368171.3 protein_coding 158179947,158180819,158181455,158182032,158182878,158183936,158184129 158180162,158181162,158181721,158182310,158183156,158184035,158184896 Gene ID= ENSG00000158473.6 TPM= 6.34 Transcript Type= protein_coding chr1 158831317 158849504 158831317 158849504 + ENST00000368141.4@MNDA ENST00000368141.4 protein_coding 158831317,158842134,158843279,158843955,158845587,158847728,158849190 158831557,158842418,158843415,158844122,158846003,158847916,158849504 Gene ID= ENSG00000163563.7 TPM= 9.06 Transcript Type= protein_coding chr1 158999939 159055154 158999939 159055154 + transcript6718.chr1.nic@IFI16 transcript6718.chr1.nic protein_coding 158999939,159010003,159014661,159015872,159016533,159018229,159020341,159032524,159049432,159051679,159053533,159054821 159000395,159010161,159014945,159015987,159016700,159018651,159020529,159032691,159049599,159052098,159053724,159055154 Gene ID= ENSG00000163565.18 TPM= 6.21 Transcript Type= NA chr1 158999939 159055154 158999939 159055154 + transcript6722.chr1.nic@IFI16 transcript6722.chr1.nic protein_coding 158999939,159010003,159014661,159015872,159016533,159018229,159020341,159032524,159051679,159053533,159054821 159000395,159010161,159014945,159015987,159016700,159018651,159020529,159032691,159052098,159053724,159055154 Gene ID= ENSG00000163565.18 TPM= 6.21 Transcript Type= NA chr1 159009895 159055154 159009895 159055154 + transcript6727.chr1.nic@IFI16 transcript6727.chr1.nic protein_coding 159009895,159014661,159015872,159016533,159018229,159020341,159032524,159051679,159053533,159054821 159010161,159014945,159015987,159016700,159018651,159020529,159032691,159052098,159053724,159055154 Gene ID= ENSG00000163565.18 TPM= 13.46 Transcript Type= NA chr1 159009927 159055155 159009927 159055155 + ENST00000295809.11@IFI16 ENST00000295809.11 protein_coding 159009927,159014661,159015872,159016533,159018229,159020341,159032524,159045297,159049432,159051679,159053533,159054821 159010161,159014945,159015987,159016700,159018651,159020529,159032691,159045464,159049599,159052098,159053724,159055155 Gene ID= ENSG00000163565.18 TPM= 30.21 Transcript Type= protein_coding chr1 159009918 159055151 159009918 159055151 + ENST00000368132.7@IFI16 ENST00000368132.7 protein_coding 159009918,159014661,159015872,159016533,159018229,159020341,159032524,159049432,159051679,159053533,159054821 159010161,159014945,159015987,159016700,159018651,159020529,159032691,159049599,159052098,159053724,159055151 Gene ID= ENSG00000163565.18 TPM= 58.73 Transcript Type= protein_coding chr1 159014681 159055124 159014681 159055124 + ENST00000448393.6@IFI16 ENST00000448393.6 protein_coding 159014681,159015872,159016533,159018229,159020341,159032524,159051679,159053533,159054821 159014945,159015987,159016700,159018651,159020529,159032691,159052098,159053724,159055124 Gene ID= ENSG00000163565.18 TPM= 1.81 Transcript Type= protein_coding chr1 159171609 159203313 159171609 159203313 + ENST00000368125.8@CADM3 ENST00000368125.8 protein_coding 159171609,159191936,159192578,159193423,159193870,159196364,159196891,159199751,159200804 159171853,159192076,159192730,159193560,159194040,159196454,159197060,159199876,159203313 Gene ID= ENSG00000162706.12 TPM= 1.81 Transcript Type= protein_coding chr1 159780960 159782543 159780960 159782543 + ENST00000368108.7@DUSP23 ENST00000368108.7 protein_coding 159780960,159781099,159782153 159780993,159781367,159782543 Gene ID= ENSG00000158716.8 TPM= 67.92 Transcript Type= protein_coding chr1 159781003 159782543 159781003 159782543 + ENST00000368107.1@DUSP23 ENST00000368107.1 protein_coding 159781003,159782153 159781367,159782543 Gene ID= ENSG00000158716.8 TPM= 133.12 Transcript Type= protein_coding chr1 159826731 159837491 159826731 159837491 + transcript6734.chr1.nnic@SLAMF8 transcript6734.chr1.nnic protein_coding 159826731,159829995,159832876,159833262,159835184 159826938,159830192,159833181,159833369,159837491 Gene ID= ENSG00000158714.10 TPM= 5.89 Transcript Type= NA chr1 159826750 159837249 159826750 159837249 + ENST00000289707.9@SLAMF8 ENST00000289707.9 protein_coding 159826750,159829866,159832876,159833262,159835184 159826938,159830192,159833181,159833369,159837249 Gene ID= ENSG00000158714.10 TPM= 20.37 Transcript Type= protein_coding chr1 159918108 159924610 159918108 159924610 - transcript6741.chr1.nnic@TAGLN2 transcript6741.chr1.nnic protein_coding 159924457,159920330,159919661,159919274,159918108 159924610,159920537,159919835,159919376,159918941 Gene ID= ENSG00000158710.14 TPM= 15.85 Transcript Type= NA chr1 160091338 160098901 160091338 160098901 - transcript6747.chr1.nic@IGSF8 transcript6747.chr1.nic protein_coding 160098834,160098409,160094869,160093710,160092924,160092282,160091808,160091338 160098901,160098517,160095246,160094171,160093331,160092695,160091938,160091608 Gene ID= ENSG00000162729.13 TPM= 4.23 Transcript Type= NA chr1 160091340 160098689 160091340 160098689 - ENST00000314485.11@IGSF8 ENST00000314485.11 protein_coding 160098409,160094869,160093710,160092924,160092282,160091808,160091340 160098689,160095246,160094171,160093331,160092695,160091938,160091608 Gene ID= ENSG00000162729.13 TPM= 74.86 Transcript Type= protein_coding chr1 160091340 160098689 160091340 160098689 - ENST00000368086.5@IGSF8 ENST00000368086.5 protein_coding 160098409,160094869,160093710,160092924,160092282,160091808,160091340 160098689,160095246,160094171,160093331,160092695,160091938,160091631 Gene ID= ENSG00000162729.13 TPM= 6.34 Transcript Type= protein_coding chr1 160091350 160098828 160091350 160098828 - ENST00000614243.4@IGSF8 ENST00000614243.4 protein_coding 160098799,160098409,160094869,160093710,160092924,160092282,160091808,160091350 160098828,160098517,160095246,160094171,160093331,160092695,160091938,160091608 Gene ID= ENSG00000162729.13 TPM= 3.32 Transcript Type= protein_coding chr1 160205337 160215376 160205337 160215376 + ENST00000360472.8@PEA15 ENST00000360472.8 protein_coding 160205337,160211543,160213110,160213422 160205522,160211716,160213265,160215376 Gene ID= ENSG00000162734.12 TPM= 55.24 Transcript Type= protein_coding chr1 160215715 160262451 160215715 160262451 - ENST00000368073.7@DCAF8 ENST00000368073.7 protein_coding 160262117,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262451,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 23 Transcript Type= protein_coding chr1 160215715 160262501 160215715 160262501 - ENST00000368074.5@DCAF8 ENST00000368074.5 protein_coding 160262449,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262501,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 5.8 Transcript Type= protein_coding chr1 160215715 160262465 160215715 160262465 - transcript6776.chr1.nic@DCAF8 transcript6776.chr1.nic protein_coding 160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262465,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 8.51 Transcript Type= NA chr1 160215715 160262479 160215715 160262479 - transcript6777.chr1.nic@DCAF8 transcript6777.chr1.nic protein_coding 160262117,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262479,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 10.69 Transcript Type= NA chr1 160215715 160262464 160215715 160262464 - transcript6778.chr1.nic@DCAF8 transcript6778.chr1.nic protein_coding 160262276,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262464,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 5.25 Transcript Type= NA chr1 160215715 160262600 160215715 160262600 - transcript6779.chr1.nic@DCAF8 transcript6779.chr1.nic protein_coding 160262449,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262600,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 30.61 Transcript Type= NA chr1 160215715 160262489 160215715 160262489 - transcript6782.chr1.nic@DCAF8 transcript6782.chr1.nic protein_coding 160262449,160261285,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262489,160261358,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 5.25 Transcript Type= NA chr1 160215715 160262476 160215715 160262476 - ENST00000326837.6@DCAF8 ENST00000326837.6 protein_coding 160262276,160261285,160243960,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262476,160261358,160244034,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000132716.18 TPM= 37.49 Transcript Type= protein_coding chr1 160215715 160262549 160215715 160262549 - transcript6788.chr1.nnic@AL139011.2 transcript6788.chr1.nnic protein_coding 160262449,160239697,160238607,160237135,160231297,160225591,160225062,160224442,160222651,160218849,160218324,160215715 160262549,160240370,160238747,160237229,160231407,160225663,160225119,160224549,160222781,160218968,160218440,160217708 Gene ID= ENSG00000258465.6 TPM= 8.87 Transcript Type= NA chr1 160276879 160285149 160276879 160285149 - transcript6799.chr1.nnic@PEX19 transcript6799.chr1.nnic protein_coding 160285055,160283530,160282944,160282417,160282039,160280070,160279801,160276879 160285149,160283639,160283109,160282502,160282200,160280246,160279845,160279582 Gene ID= ENSG00000162735.18 TPM= 7.24 Transcript Type= NA chr1 160276812 160285146 160276812 160285146 - ENST00000368072.9@PEX19 ENST00000368072.9 protein_coding 160285055,160283530,160282944,160282417,160282039,160280070,160279801,160276812 160285146,160283639,160283109,160282502,160282200,160280246,160279845,160279634 Gene ID= ENSG00000162735.18 TPM= 112.13 Transcript Type= protein_coding chr1 160276867 160285154 160276867 160285154 - ENST00000472750.5@PEX19 ENST00000472750.5 protein_coding 160285055,160282944,160282417,160282039,160280070,160279801,160276867 160285154,160283109,160282502,160282200,160280246,160279845,160279634 Gene ID= ENSG00000162735.18 TPM= 29.73 Transcript Type= nonsense_mediated_decay chr1 160288588 160343264 160288588 160343264 - transcript6813.chr1.nic@COPA transcript6813.chr1.nic protein_coding 160343131,160340181,160339909,160335242,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160288588 160343264,160340294,160339982,160335322,160333679,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305571,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216 Gene ID= ENSG00000122218.14 TPM= 17.66 Transcript Type= NA chr1 160289273 160343248 160289273 160343248 - ENST00000368069.7@COPA ENST00000368069.7 protein_coding 160343131,160340181,160339909,160335242,160333603,160332448,160325543,160323431,160313990,160313085,160311868,160310192,160309101,160307163,160306354,160305688,160305433,160299102,160298845,160297556,160297343,160296061,160295736,160294768,160294484,160293386,160293166,160292484,160292012,160291819,160291335,160290492,160289273 160343248,160340294,160339982,160335322,160333679,160332557,160325652,160323530,160314125,160313167,160312018,160310258,160309176,160307245,160306493,160305773,160305598,160299264,160298991,160297745,160297438,160296149,160295859,160294857,160294593,160293463,160293234,160292620,160292198,160291929,160291496,160290686,160290216 Gene ID= ENSG00000122218.14 TPM= 17.66 Transcript Type= protein_coding chr1 160343272 160358952 160343272 160358952 + ENST00000294785.9@NCSTN ENST00000294785.9 protein_coding 160343272,160344722,160348999,160349549,160350105,160351222,160351696,160352054,160352887,160353160,160354118,160355655,160355863,160356260,160356600,160357041,160358149 160343481,160344826,160349122,160349670,160350250,160351372,160351805,160352206,160352991,160353237,160354290,160355757,160355958,160356347,160356754,160357253,160358952 Gene ID= ENSG00000162736.15 TPM= 96.89 Transcript Type= protein_coding chr1 160739265 160754821 160739265 160754821 + ENST00000368043.7@SLAMF7 ENST00000368043.7 protein_coding 160739265,160748194,160749821,160750304,160751345,160752186,160753106 160739356,160748514,160750093,160750423,160751448,160752248,160754821 Gene ID= ENSG00000026751.16 TPM= 1.81 Transcript Type= protein_coding chr1 160995211 161021348 160995211 161021348 - ENST00000368026.10@F11R ENST00000368026.10 protein_coding 161021010,161001285,161001020,161000631,161000146,160999876,160999640,160999396,160999043,160995211 161021348,161001353,161001127,161000777,161000348,160999978,160999747,160999408,160999091,160998906 Gene ID= ENSG00000158769.17 TPM= 161.55 Transcript Type= protein_coding chr1 160995234 161038966 160995234 161038966 - transcript6838.chr1.nnic@AL591806.3 transcript6838.chr1.nnic protein_coding 161038880,161001285,161001020,161000631,161000146,160999876,160999640,160999396,160999043,160995234 161038966,161001353,161001127,161000777,161000348,160999978,160999747,160999408,160999091,160998906 Gene ID= ENSG00000270149.5 TPM= 11.23 Transcript Type= NA chr1 161037620 161038986 161037620 161038986 - transcript6847.chr1.nnic@TSTD1 transcript6847.chr1.nnic protein_coding 161038880,161038551,161037913,161037620 161038986,161038634,161038075,161037826 Gene ID= ENSG00000215845.10 TPM= 9.96 Transcript Type= NA chr1 161037631 161038977 161037631 161038977 - ENST00000368024.5@TSTD1 ENST00000368024.5 protein_coding 161038880,161037913,161037631 161038977,161038075,161037826 Gene ID= ENSG00000215845.10 TPM= 7.24 Transcript Type= protein_coding chr1 161037631 161038990 161037631 161038990 - ENST00000423014.2@TSTD1 ENST00000423014.2 protein_coding 161038880,161038551,161037913,161037631 161038990,161038673,161038075,161037826 Gene ID= ENSG00000215845.10 TPM= 93.72 Transcript Type= protein_coding chr1 161037631 161038950 161037631 161038950 - ENST00000368023.7@TSTD1 ENST00000368023.7 protein_coding 161038880,161038551,161037913,161037631 161038950,161038694,161038075,161037826 Gene ID= ENSG00000215845.10 TPM= 3.17 Transcript Type= protein_coding chr1 161039251 161045977 161039251 161045977 - ENST00000368021.7@USF1 ENST00000368021.7 protein_coding 161045858,161043268,161042833,161042555,161042116,161041651,161041324,161040814,161040576,161040202,161039251 161045977,161043360,161042882,161042670,161042217,161041846,161041411,161040872,161040670,161040330,161040009 Gene ID= ENSG00000158773.14 TPM= 8.15 Transcript Type= protein_coding chr1 161046943 161069830 161046943 161069830 - transcript6856.chr1.nnic@ARHGAP30 transcript6856.chr1.nnic protein_coding 161069528,161059614,161056388,161054623,161054366,161053258,161052626,161052440,161052286,161051314,161049595,161046943 161069830,161059716,161056532,161054705,161054473,161053385,161052797,161052543,161052363,161051715,161049689,161049334 Gene ID= ENSG00000186517.13 TPM= 9.06 Transcript Type= NA chr1 161098395 161100344 161098395 161100344 + transcript6859.chr1.nic@KLHDC9 transcript6859.chr1.nic protein_coding 161098395,161098666,161099346,161099598,161100061 161098481,161099062,161099505,161099796,161100344 Gene ID= ENSG00000162755.13 TPM= 3.17 Transcript Type= NA chr1 161098394 161100346 161098394 161100346 + ENST00000368011.8@KLHDC9 ENST00000368011.8 protein_coding 161098394,161099346,161099598,161100061 161099062,161099505,161099796,161100346 Gene ID= ENSG00000162755.13 TPM= 8.6 Transcript Type= protein_coding chr1 161098361 161100298 161098361 161100298 + ENST00000490724.6@KLHDC9 ENST00000490724.6 protein_coding 161098361,161098666,161099346,161099598,161100061 161098404,161099062,161099505,161099796,161100298 Gene ID= ENSG00000162755.13 TPM= 10.87 Transcript Type= processed_transcript chr1 161100556 161118111 161100556 161118111 - ENST00000368010.3@PFDN2 ENST00000368010.3 protein_coding 161117952,161102287,161102048,161100556 161118111,161102375,161102171,161100859 Gene ID= ENSG00000143256.4 TPM= 47.09 Transcript Type= protein_coding chr1 161118087 161122024 161118087 161122024 + transcript6866.chr1.nic@NIT1 transcript6866.chr1.nic protein_coding 161118087,161118786,161119134,161119509,161119819,161120107,161120499 161118239,161118881,161119388,161119612,161119952,161120232,161122024 Gene ID= ENSG00000158793.13 TPM= 6.64 Transcript Type= NA chr1 161118101 161121067 161118101 161121067 + ENST00000368009.6@NIT1 ENST00000368009.6 protein_coding 161118101,161118786,161119134,161119509,161119819,161120107,161120499 161118178,161118881,161119388,161119612,161119952,161120232,161121067 Gene ID= ENSG00000158793.13 TPM= 71.99 Transcript Type= protein_coding chr1 161118118 161125445 161118118 161125445 + ENST00000368008.5@NIT1 ENST00000368008.5 protein_coding 161118118,161118786,161119134,161119509,161119819,161120107,161124141 161118178,161118881,161119388,161119612,161119952,161120232,161125445 Gene ID= ENSG00000158793.13 TPM= 7.24 Transcript Type= protein_coding chr1 161118118 161121193 161118118 161121193 + ENST00000392190.9@NIT1 ENST00000392190.9 protein_coding 161118118,161118786,161119134,161119509,161119819,161120107,161120499 161118225,161118881,161119388,161119612,161119952,161120232,161121193 Gene ID= ENSG00000158793.13 TPM= 15.24 Transcript Type= protein_coding chr1 161153978 161158855 161153978 161158855 + transcript6888.chr1.nic@UFC1 transcript6888.chr1.nic protein_coding 161153978,161156950,161157254,161157617,161158121,161158412 161154070,161157017,161157317,161157693,161158211,161158855 Gene ID= ENSG00000143222.11 TPM= 1.81 Transcript Type= NA chr1 161153752 161158856 161153752 161158856 + ENST00000368003.5@UFC1 ENST00000368003.5 protein_coding 161153752,161156950,161157254,161157617,161158121,161158412 161154120,161157017,161157317,161157693,161158211,161158856 Gene ID= ENSG00000143222.11 TPM= 74.25 Transcript Type= protein_coding chr1 161159480 161165722 161159480 161165722 + transcript6891.chr1.nic@USP21 transcript6891.chr1.nic protein_coding 161159480,161160329,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357 161159678,161160506,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165722 Gene ID= ENSG00000143258.15 TPM= 4.07 Transcript Type= NA chr1 161159484 161165722 161159484 161165722 + transcript6892.chr1.nnic@USP21 transcript6892.chr1.nnic protein_coding 161159484,161160620,161161122,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357 161159678,161160979,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165722 Gene ID= ENSG00000143258.15 TPM= 3.17 Transcript Type= NA chr1 161159479 161165723 161159479 161165723 + ENST00000289865.12@USP21 ENST00000289865.12 protein_coding 161159479,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357 161159678,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165723 Gene ID= ENSG00000143258.15 TPM= 19.47 Transcript Type= protein_coding chr1 161159464 161165714 161159464 161165714 + ENST00000368002.7@USP21 ENST00000368002.7 protein_coding 161159464,161160366,161160620,161162038,161162270,161162615,161162919,161163555,161163878,161164164,161164534,161164835,161165029,161165357 161159678,161160506,161161240,161162097,161162390,161162726,161163074,161163619,161163981,161164250,161164612,161164942,161165143,161165714 Gene ID= ENSG00000143258.15 TPM= 16.75 Transcript Type= protein_coding chr1 161166392 161171181 161166392 161171181 + transcript6903.chr1.nnic@PPOX transcript6903.chr1.nnic protein_coding 161166392,161166840,161167100,161167355,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034 161166672,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171181 Gene ID= ENSG00000143224.17 TPM= 12.68 Transcript Type= NA chr1 161166392 161171181 161166392 161171181 + transcript6904.chr1.nnic@PPOX transcript6904.chr1.nnic protein_coding 161166392,161166840,161167100,161167355,161167995,161168432,161168993,161169660,161169906,161170490,161170680,161170907,161171034 161166672,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170581,161170769,161170949,161171181 Gene ID= ENSG00000143224.17 TPM= 1.81 Transcript Type= NA chr1 161166410 161171218 161166410 161171218 + ENST00000352210.9@PPOX ENST00000352210.9 protein_coding 161166410,161166840,161167100,161167371,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034 161166611,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171218 Gene ID= ENSG00000143224.17 TPM= 10.87 Transcript Type= protein_coding chr1 161166392 161171181 161166392 161171181 + transcript6920.chr1.nic@PPOX transcript6920.chr1.nic protein_coding 161166392,161166840,161167100,161167371,161168413,161168993,161169660,161169906,161170409,161170620,161170907,161171034 161166672,161166934,161167234,161167486,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171181 Gene ID= ENSG00000143224.17 TPM= 1.81 Transcript Type= NA chr1 161166415 161171216 161166415 161171216 + ENST00000367999.8@PPOX ENST00000367999.8 protein_coding 161166415,161166840,161167100,161167371,161167995,161168432,161168993,161169660,161169906,161170409,161170620,161170907,161171034 161166672,161166934,161167234,161167486,161168127,161168576,161169183,161169720,161170024,161170519,161170769,161170949,161171216 Gene ID= ENSG00000143224.17 TPM= 44.37 Transcript Type= protein_coding chr1 161171309 161177528 161171309 161177528 - transcript6931.chr1.nic@B4GALT3 transcript6931.chr1.nic protein_coding 161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171309 161177528,161176579,161175893,161175228,161174049,161173727,161172331,161172089 Gene ID= ENSG00000158850.14 TPM= 2.11 Transcript Type= NA chr1 161171311 161177968 161171311 161177968 - ENST00000622395.4@B4GALT3 ENST00000622395.4 protein_coding 161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171311 161177968,161176579,161176095,161175228,161174049,161173727,161172331,161172089 Gene ID= ENSG00000158850.14 TPM= 16.6 Transcript Type= protein_coding chr1 161171310 161177485 161171310 161177485 - ENST00000319769.9@B4GALT3 ENST00000319769.9 protein_coding 161177423,161176434,161175808,161174993,161173859,161173605,161172227,161171310 161177485,161176579,161176074,161175228,161174049,161173727,161172331,161172089 Gene ID= ENSG00000158850.14 TPM= 28.37 Transcript Type= protein_coding chr1 161184308 161199056 161184308 161199056 - ENST00000367996.5@ADAMTS4 ENST00000367996.5 protein_coding 161197995,161196557,161196171,161195465,161193935,161193640,161193213,161192065,161184308 161199056,161196880,161196303,161195635,161194221,161193826,161193388,161192240,161191564 Gene ID= ENSG00000158859.9 TPM= 17.21 Transcript Type= protein_coding chr1 161202363 161214403 161202363 161214403 + transcript6943.chr1.nic@NDUFS2 transcript6943.chr1.nic protein_coding 161202363,161203437,161206407,161209193,161209483,161209857,161210111,161210304,161210591,161212351,161212592,161213380,161213649,161213864,161214156 161202480,161203543,161206597,161209313,161209595,161209931,161210188,161210389,161210710,161212480,161212654,161213475,161213732,161213921,161214403 Gene ID= ENSG00000158864.12 TPM= 10.69 Transcript Type= NA chr1 161202278 161214403 161202278 161214403 + transcript6944.chr1.nic@NDUFS2 transcript6944.chr1.nic protein_coding 161202278,161203437,161206407,161209193,161209483,161209857,161210111,161210304,161210591,161212351,161213380,161213649,161213864,161214156 161202480,161203543,161206597,161209313,161209595,161209931,161210188,161210389,161210710,161212480,161213475,161213732,161213921,161214403 Gene ID= ENSG00000158864.12 TPM= 442.25 Transcript Type= NA chr1 161215234 161219248 161215234 161219248 + ENST00000490414.1@FCER1G ENST00000490414.1 protein_coding 161215234,161218241,161218703,161218881 161215370,161218276,161218723,161219248 Gene ID= ENSG00000158869.10 TPM= 9.06 Transcript Type= processed_transcript chr1 161215297 161219248 161215297 161219248 + ENST00000289902.1@FCER1G ENST00000289902.1 protein_coding 161215297,161217986,161218241,161218703,161218881 161215370,161218077,161218276,161218723,161219248 Gene ID= ENSG00000158869.10 TPM= 95.99 Transcript Type= protein_coding chr1 161314257 161375340 161314257 161375340 + ENST00000367975.6@SDHC ENST00000367975.6 protein_coding 161314257,161323614,161328396,161340594,161356677,161362329 161314425,161323670,161328497,161340655,161356840,161375340 Gene ID= ENSG00000143252.14 TPM= 146.7 Transcript Type= protein_coding chr1 161314381 161363189 161314381 161363189 + ENST00000342751.8@SDHC ENST00000342751.8 protein_coding 161314381,161323614,161328396,161340594,161362329 161314425,161323670,161328497,161340655,161363189 Gene ID= ENSG00000143252.14 TPM= 9.06 Transcript Type= protein_coding chr1 161505415 161519567 161505415 161519567 + transcript6980.chr1.nic@FCGR2A transcript6980.chr1.nic protein_coding 161505415,161505987,161506334,161509820,161513895,161517975 161505552,161506007,161506591,161510074,161513932,161519567 Gene ID= ENSG00000143226.13 TPM= 4.53 Transcript Type= NA chr1 161505430 161519568 161505430 161519568 + ENST00000271450.10@FCGR2A ENST00000271450.10 protein_coding 161505430,161505987,161506334,161509820,161510834,161513895,161517975 161505552,161506007,161506591,161510074,161510956,161513932,161519568 Gene ID= ENSG00000143226.13 TPM= 60.67 Transcript Type= protein_coding chr1 161541765 161550623 161541765 161550623 - ENST00000436743.5@FCGR3A ENST00000436743.5 protein_coding 161550531,161549697,161549011,161548421,161544701,161541765 161550623,161549798,161549031,161548678,161544958,161543199 Gene ID= ENSG00000203747.10 TPM= 119.98 Transcript Type= protein_coding chr1 161541796 161550591 161541796 161550591 - ENST00000367967.7@FCGR3A ENST00000367967.7 protein_coding 161550531,161549697,161549011,161548421,161544701,161541796 161550591,161549780,161549031,161548678,161544958,161543199 Gene ID= ENSG00000203747.10 TPM= 37.58 Transcript Type= protein_coding chr1 161581339 161600242 161581339 161600242 + ENST00000543859.5@FCGR2C ENST00000543859.5 polymorphic_pseudogene 161581339,161588422,161589562,161589600,161591144,161592129,161595553,161599630 161581549,161588442,161589596,161589819,161591398,161592242,161595590,161600242 Gene ID= ENSG00000244682.7 TPM= 2.72 Transcript Type= protein_coding chr1 161623200 161631462 161623200 161631462 - ENST00000294800.7@FCGR3B ENST00000294800.7 protein_coding 161631055,161630368,161629778,161626145,161623200 161631462,161630388,161630035,161626402,161624639 Gene ID= ENSG00000162747.9 TPM= 58.86 Transcript Type= protein_coding chr1 161663147 161678022 161663147 161678022 + ENST00000236937.13@FCGR2B ENST00000236937.13 protein_coding 161663147,161670252,161671392,161672975,161673960,161677328,161677476 161663353,161670272,161671649,161673229,161674073,161677365,161678022 Gene ID= ENSG00000072694.20 TPM= 19.02 Transcript Type= protein_coding chr1 161725901 161728142 161725901 161728142 + ENST00000495397.1@FCRLB ENST00000495397.1 protein_coding 161725901,161727247 161726993,161728142 Gene ID= ENSG00000162746.14 TPM= 2.72 Transcript Type= processed_transcript chr1 161749770 161757162 161749770 161757162 + ENST00000367943.4@DUSP12 ENST00000367943.4 protein_coding 161749770,161751668,161751866,161752368,161753075,161756786 161750145,161751781,161751984,161752464,161753261,161757162 Gene ID= ENSG00000081721.11 TPM= 13.58 Transcript Type= protein_coding chr1 161766321 161962109 161766321 161962109 + transcript7003.chr1.nnic@ATF6 transcript7003.chr1.nnic protein_coding 161766321,161778244,161778670,161781912,161783990,161791408,161792124,161802052,161819633,161821070,161846449,161851722,161853224,161860207,161863198,161912296,161958446 161766442,161778320,161778695,161781999,161784096,161791537,161792327,161802272,161819818,161821161,161846580,161851835,161853323,161860277,161863312,161912380,161962109 Gene ID= ENSG00000118217.5 TPM= 2.72 Transcript Type= NA chr1 161766531 161962109 161766531 161962109 + transcript7004.chr1.nnic@ATF6 transcript7004.chr1.nnic protein_coding 161766531,161770799,161778244,161781912,161783990,161791408,161792124,161802052,161819633,161821070,161846449,161851722,161853224,161860207,161863198,161912296,161958446 161766806,161770868,161778320,161781999,161784096,161791537,161792327,161802272,161819818,161821161,161846580,161851835,161853323,161860277,161863312,161912380,161962109 Gene ID= ENSG00000118217.5 TPM= 2.72 Transcript Type= NA chr1 161766502 161962109 161766502 161962109 + transcript7006.chr1.nnic@ATF6 transcript7006.chr1.nnic protein_coding 161766502,161778244,161781912,161783990,161791408,161792124,161802052,161819633,161821070,161846449,161851722,161853224,161860207,161863198,161912296,161958446 161766806,161778320,161781999,161784096,161791537,161792327,161802272,161819818,161821161,161846580,161851835,161853323,161860277,161863312,161912380,161962109 Gene ID= ENSG00000118217.5 TPM= 2.72 Transcript Type= NA chr1 162069693 162386816 162069693 162386816 + transcript7013.chr1.nic@NOS1AP transcript7013.chr1.nic protein_coding 162069693,162154405,162287344,162300648,162333017,162343835,162355187,162356960,162365404,162367052,162381891,162383182 162070282,162154476,162287436,162300706,162333125,162343976,162355353,162357136,162365569,162367204,162382218,162386816 Gene ID= ENSG00000198929.12 TPM= 3.62 Transcript Type= NA chr1 162497805 162529629 162497805 162529629 + ENST00000538489.5@UHMK1 ENST00000538489.5 protein_coding 162497805,162499955,162500913,162503754,162512500,162512725,162522404 162498268,162500247,162501104,162503848,162512576,162512823,162529629 Gene ID= ENSG00000152332.15 TPM= 4.53 Transcript Type= protein_coding chr1 162497843 162529610 162497843 162529610 + ENST00000489294.1@UHMK1 ENST00000489294.1 protein_coding 162497843,162499955,162500913,162503754,162512500,162512725,162518102,162522404 162498268,162500247,162501104,162503848,162512576,162512823,162518190,162529610 Gene ID= ENSG00000152332.15 TPM= 19.02 Transcript Type= protein_coding chr1 162561487 162600584 162561487 162600584 + transcript7020.chr1.nnic@UAP1 transcript7020.chr1.nnic protein_coding 162561487,162562473,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271 162561777,162562584,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162600584 Gene ID= ENSG00000117143.13 TPM= 6.52 Transcript Type= NA chr1 162561506 162599842 162561506 162599842 + ENST00000271469.7@UAP1 ENST00000271469.7 protein_coding 162561506,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162592732,162597792,162599271 162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162592782,162597858,162599842 Gene ID= ENSG00000117143.13 TPM= 134.2 Transcript Type= protein_coding chr1 162561533 162599837 162561533 162599837 + ENST00000367926.8@UAP1 ENST00000367926.8 protein_coding 162561533,162566012,162576777,162579428,162581287,162587475,162588693,162590323,162597792,162599271 162561777,162566348,162576981,162579603,162581459,162587668,162588833,162590511,162597858,162599837 Gene ID= ENSG00000117143.13 TPM= 63.57 Transcript Type= protein_coding chr1 162630862 162786623 162630862 162786623 + transcript7031.chr1.nnic@DDR2 transcript7031.chr1.nnic protein_coding 162630862,162631349,162655211,162719037,162753095,162754624,162755156,162755664,162759796,162761211,162766001,162767229,162770302,162772024,162773469,162775652,162776136,162778580,162780112 162630892,162631447,162655374,162719145,162753197,162754855,162755303,162755769,162759979,162761454,162766063,162767359,162770512,162772247,162773596,162775843,162776370,162778729,162786623 Gene ID= ENSG00000162733.16 TPM= 20.37 Transcript Type= NA chr1 162630907 162786623 162630907 162786623 + transcript7034.chr1.nic@DDR2 transcript7034.chr1.nic protein_coding 162630907,162655211,162719037,162753095,162754624,162755156,162755664,162759796,162761211,162766001,162767229,162770302,162772024,162773469,162775652,162776136,162778580,162780112 162631447,162655374,162719145,162753197,162754855,162755303,162755769,162759979,162761454,162766063,162767359,162770512,162772247,162773596,162775843,162776370,162778729,162786623 Gene ID= ENSG00000162733.16 TPM= 18.56 Transcript Type= NA chr1 162632470 162780421 162632470 162780421 + ENST00000367921.7@DDR2 ENST00000367921.7 protein_coding 162632470,162655211,162719037,162753095,162754624,162755156,162755664,162759796,162761211,162766001,162767229,162770302,162772024,162773469,162775652,162776136,162778580,162780112 162632631,162655374,162719145,162753197,162754855,162755303,162755769,162759979,162761454,162766063,162767359,162770512,162772247,162773596,162775843,162776370,162778729,162780421 Gene ID= ENSG00000162733.16 TPM= 9.06 Transcript Type= protein_coding chr1 162790673 162812817 162790673 162812817 + transcript7041.chr1.nic@HSD17B7 transcript7041.chr1.nic protein_coding 162790673,162792659,162796585,162797828,162799743,162803431,162804267,162805394,162812298 162790835,162792862,162796677,162797916,162799937,162803535,162804323,162805492,162812817 Gene ID= ENSG00000132196.13 TPM= 3.62 Transcript Type= NA chr1 163142304 163203113 163142304 163203113 - ENST00000313961.9@RGS5 ENST00000313961.9 protein_coding 163202792,163168258,163161915,163152550,163142304 163203113,163168368,163161976,163152716,163147503 Gene ID= ENSG00000143248.12 TPM= 44.37 Transcript Type= protein_coding chr1 164792492 164851821 164792492 164851821 + ENST00000540236.3@PBX1 ENST00000540236.3 protein_coding 164792492,164799699,164807542,164811990,164820072,164821537,164846584 164792738,164799889,164807677,164812149,164820184,164821626,164851821 Gene ID= ENSG00000185630.18 TPM= 19.02 Transcript Type= protein_coding chr1 164792492 164851821 164792492 164851821 + ENST00000612123.3@PBX1 ENST00000612123.3 protein_coding 164792492,164799699,164807542,164811990,164821537,164846584 164792738,164799889,164807677,164812149,164821626,164851821 Gene ID= ENSG00000185630.18 TPM= 16.3 Transcript Type= protein_coding chr1 164792492 164886045 164792492 164886045 + transcript7055.chr1.nnic@PBX1 transcript7055.chr1.nnic protein_coding 164792492,164799699,164807542,164811990,164821537,164884542 164792738,164799889,164807677,164812149,164821626,164886045 Gene ID= ENSG00000185630.18 TPM= 4.53 Transcript Type= NA chr1 165401117 165424986 165401117 165424986 - transcript7056.chr1.nic@RXRG transcript7056.chr1.nic protein_coding 165424751,165419870,165417041,165410949,165410702,165409558,165408227,165406812,165401117 165424986,165420014,165417220,165411109,165410831,165409690,165408318,165406917,165401410 Gene ID= ENSG00000143171.12 TPM= 1.81 Transcript Type= NA chr1 165630861 165655620 165630861 165655620 + ENST00000367889.7@MGST3 ENST00000367889.7 protein_coding 165630861,165649841,165651014,165651978,165654279,165655368 165631293,165649964,165651087,165652035,165654351,165655620 Gene ID= ENSG00000143198.12 TPM= 231.21 Transcript Type= protein_coding chr1 165631240 165655620 165631240 165655620 + ENST00000367885.5@MGST3 ENST00000367885.5 protein_coding 165631240,165632231,165649841,165651014,165651978,165654279,165655368 165631293,165632274,165649964,165651087,165652035,165654351,165655620 Gene ID= ENSG00000143198.12 TPM= 7.54 Transcript Type= protein_coding chr1 165631239 165655617 165631239 165655617 + ENST00000495447.5@MGST3 ENST00000495447.5 protein_coding 165631239,165649755,165651014,165651978,165654279,165655368 165631293,165649964,165651087,165652035,165654351,165655617 Gene ID= ENSG00000143198.12 TPM= 5.73 Transcript Type= retained_intron chr1 165662216 165698863 165662216 165698863 - ENST00000354775.4@ALDH9A1 ENST00000354775.4 protein_coding 165698378,165695252,165682981,165682107,165680487,165679442,165669262,165668926,165667309,165665018,165662216 165698863,165695397,165683110,165682241,165680683,165679582,165669450,165669013,165667450,165665130,165663144 Gene ID= ENSG00000143149.12 TPM= 547.85 Transcript Type= protein_coding chr1 165727538 165768876 165727538 165768876 - ENST00000464650.5@TMCO1 ENST00000464650.5 protein_coding 165768759,165768192,165759525,165754228,165752102,165743167,165727538 165768876,165768269,165759584,165754274,165752169,165743311,165728121 Gene ID= ENSG00000143183.16 TPM= 6.34 Transcript Type= protein_coding chr1 165902595 165911618 165902595 165911618 + ENST00000479872.5@UCK2 ENST00000479872.5 protein_coding 165902595,165905921,165907684 165903279,165905969,165911618 Gene ID= ENSG00000143179.14 TPM= 6.34 Transcript Type= retained_intron chr1 166839457 166856344 166839457 166856344 + ENST00000367876.8@POGK ENST00000367876.8 protein_coding 166839457,166840955,166846612,166847494,166848938,166852585 166839604,166841088,166846738,166847592,166850423,166856344 Gene ID= ENSG00000143157.11 TPM= 6.34 Transcript Type= protein_coding chr1 166839479 166854469 166839479 166854469 + transcript7087.chr1.nic@POGK transcript7087.chr1.nic protein_coding 166839479,166840955,166846612,166847494,166848938,166852585 166839769,166841088,166846738,166847592,166850423,166854469 Gene ID= ENSG00000143157.11 TPM= 9.06 Transcript Type= NA chr1 166856510 166876327 166856510 166876327 - ENST00000367874.4@TADA1 ENST00000367874.4 protein_coding 166876160,166869763,166869445,166863824,166862203,166860186,166858119,166856510 166876327,166869854,166869510,166863921,166862412,166860337,166858281,166857719 Gene ID= ENSG00000152382.5 TPM= 20.83 Transcript Type= protein_coding chr1 167220829 167427345 167220829 167427345 + ENST00000367866.6@POU2F1 ENST00000367866.6 protein_coding 167220829,167332470,167365467,167370161,167371917,167374108,167376029,167383857,167389588,167396286,167397994,167399186,167401451,167411959,167413026,167415500 167220958,167332535,167365567,167370214,167372036,167374296,167376155,167383951,167389761,167396427,167398133,167399365,167401556,167412304,167413114,167427345 Gene ID= ENSG00000143190.21 TPM= 2.72 Transcript Type= protein_coding chr1 167541013 167553767 167541013 167553767 - ENST00000370509.4@CREG1 ENST00000370509.4 protein_coding 167553388,167548002,167546101,167541013 167553767,167548121,167546285,167542301 Gene ID= ENSG00000143162.7 TPM= 453.68 Transcript Type= protein_coding chr1 167721950 167791919 167721950 167791919 + ENST00000359523.6@MPZL1 ENST00000359523.6 protein_coding 167721950,167765583,167772275,167773236,167776064,167787820 167722242,167765749,167772488,167773368,167776166,167791919 Gene ID= ENSG00000197965.11 TPM= 117.27 Transcript Type= protein_coding chr1 167721989 167790819 167721989 167790819 + ENST00000392121.7@MPZL1 ENST00000392121.7 protein_coding 167721989,167765583,167787820 167722242,167765749,167790819 Gene ID= ENSG00000197965.11 TPM= 11.32 Transcript Type= protein_coding chr1 167916729 167936040 167916729 167936040 - ENST00000367846.8@MPC2 ENST00000367846.8 protein_coding 167935733,167924497,167920547,167919979,167916729 167936040,167924537,167920631,167920090,167918359 Gene ID= ENSG00000143158.10 TPM= 168.43 Transcript Type= protein_coding chr1 167936578 168075842 167936578 168075842 + transcript7109.chr1.nic@DCAF6 transcript7109.chr1.nic protein_coding 167936578,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168015781,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371 167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168015951,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075842 Gene ID= ENSG00000143164.15 TPM= 22.77 Transcript Type= NA chr1 167936661 168075843 167936661 168075843 + ENST00000367843.7@DCAF6 ENST00000367843.7 protein_coding 167936661,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168022988,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371 167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168023047,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075843 Gene ID= ENSG00000143164.15 TPM= 87.06 Transcript Type= protein_coding chr1 167936708 168075834 167936708 168075834 + ENST00000312263.10@DCAF6 ENST00000312263.10 protein_coding 167936708,167951800,167966629,167974830,167987495,167991204,167993226,168002482,168003870,168004533,168038371,168043025,168044585,168044900,168063621,168065590,168066377,168068358,168075371 167937008,167951861,167966721,167975015,167987608,167991339,167993440,168002575,168003989,168004793,168038488,168043140,168044671,168045227,168063759,168065746,168066465,168068463,168075834 Gene ID= ENSG00000143164.15 TPM= 261.83 Transcript Type= protein_coding chr1 168084632 168096944 168084632 168096944 - transcript7131.chr1.nic@GPR161 transcript7131.chr1.nic protein_coding 168096508,168090564,168087585,168084632 168096944,168090668,168087704,168085796 Gene ID= ENSG00000143147.14 TPM= 1.81 Transcript Type= NA chr1 168178894 168202111 168178894 168202111 + transcript7132.chr1.nnic@TIPRL transcript7132.chr1.nnic protein_coding 168178894,168183902,168184779,168191369,168196547,168198919,168199903,168201777 168179181,168184081,168184878,168191500,168196642,168198981,168200704,168202111 Gene ID= ENSG00000143155.12 TPM= 5.43 Transcript Type= NA chr1 168178933 168202114 168178933 168202114 + ENST00000367833.6@TIPRL ENST00000367833.6 protein_coding 168178933,168183902,168184779,168191369,168196547,168198919,168199903 168179181,168184081,168184878,168191500,168196642,168198981,168202114 Gene ID= ENSG00000143155.12 TPM= 27.17 Transcript Type= protein_coding chr1 168226008 168253025 168226008 168253025 + ENST00000271375.6@SFT2D2 ENST00000271375.6 protein_coding 168226008,168231514,168231834,168235101,168236589,168236712,168239131,168242501 168226142,168231600,168231919,168235182,168236624,168236770,168239160,168253025 Gene ID= ENSG00000213064.9 TPM= 130.4 Transcript Type= protein_coding chr1 168695459 168729264 168695459 168729264 - ENST00000367817.3@DPT ENST00000367817.3 protein_coding 168728870,168714221,168701017,168695459 168729264,168714346,168701124,168696615 Gene ID= ENSG00000143196.4 TPM= 11.77 Transcript Type= protein_coding chr1 169132531 169367967 169132531 169367967 - ENST00000367811.7@NME7 ENST00000367811.7 protein_coding 169367708,169324393,169323117,169309970,169303145,169298556,169287303,169237623,169235131,169230718,169169447,169132531 169367967,169324500,169323283,169310080,169303195,169298763,169287408,169237687,169235199,169230819,169169554,169132817 Gene ID= ENSG00000143156.13 TPM= 13.58 Transcript Type= protein_coding chr1 169367970 169388305 169367970 169388305 + ENST00000367808.7@BLZF1 ENST00000367808.7 protein_coding 169367970,169369473,169376540,169378330,169380481,169382062,169386997 169368342,169369550,169376979,169378529,169380609,169382281,169388305 Gene ID= ENSG00000117475.13 TPM= 21.73 Transcript Type= protein_coding chr1 169463909 169486003 169463909 169486003 - ENST00000236137.9@SLC19A2 ENST00000236137.9 protein_coding 169485563,169477155,169469964,169468644,169468111,169463909 169486003,169477757,169470186,169468836,169468252,169465977 Gene ID= ENSG00000117479.12 TPM= 5.43 Transcript Type= protein_coding chr1 169588422 169630121 169588422 169630121 - transcript7159.chr1.nic@SELP transcript7159.chr1.nic protein_coding 169630072,169619129,169617028,169613586,169612929,169612217,169611492,169609504,169606949,169603026,169596991,169595925,169594692,169593605,169591426,169590147,169588422 169630121,169619219,169617414,169613693,169613114,169612402,169611677,169609689,169607134,169603211,169597176,169596134,169594877,169593724,169591456,169590202,169589565 Gene ID= ENSG00000174175.16 TPM= 2.72 Transcript Type= NA chr1 169690667 169711698 169690667 169711698 - ENST00000236147.4@SELL ENST00000236147.4 protein_coding 169711496,169710436,169708417,169707342,169704568,169703255,169701560,169696535,169690667 169711698,169710517,169708803,169707449,169704753,169703440,169701688,169696553,169691802 Gene ID= ENSG00000188404.8 TPM= 1.81 Transcript Type= protein_coding chr1 169722641 169734062 169722641 169734062 - ENST00000333360.11@SELE ENST00000333360.11 protein_coding 169733971,169733576,169732615,169731835,169730432,169729488,169729186,169728058,169727739,169727349,169726699,169725907,169725729,169722641 169734062,169733660,169732998,169731942,169730617,169729673,169729374,169728246,169727927,169727525,169726806,169725928,169725801,169724509 Gene ID= ENSG00000007908.15 TPM= 1.81 Transcript Type= protein_coding chr1 169794747 169853261 169794747 169853261 + transcript7163.chr1.nic@C1orf112 transcript7163.chr1.nic protein_coding 169794747,169798919,169800883,169802621,169803169,169804075,169806004,169807791,169821679,169823408,169827051,169827711,169829263,169830259,169830696,169832417,169836927,169842417,169843674,169847690,169849500,169850265,169851817,169852790 169795213,169798958,169800971,169802725,169803309,169804240,169806088,169807929,169821759,169823472,169827199,169827840,169829449,169830341,169830747,169832506,169837112,169842539,169843769,169847803,169849604,169850345,169851936,169853261 Gene ID= ENSG00000000460.16 TPM= 3.62 Transcript Type= NA chr1 169792529 169794966 169792529 169794966 - ENST00000310392.4@METTL18 ENST00000310392.4 protein_coding 169794815,169792529 169794966,169793897 Gene ID= ENSG00000171806.11 TPM= 5.43 Transcript Type= protein_coding chr1 169851074 169893947 169851074 169893947 - transcript7167.chr1.nnic@SCYL3 transcript7167.chr1.nnic protein_coding 169893476,169888676,169878634,169875978,169873696,169870255,169868928,169866896,169864369,169862613,169859041,169854270,169851074 169893947,169888890,169878819,169876091,169873752,169870357,169869039,169866973,169864508,169862797,169859212,169854964,169853772 Gene ID= ENSG00000000457.13 TPM= 7.24 Transcript Type= NA chr1 169853074 169893959 169853074 169893959 - ENST00000367772.8@SCYL3 ENST00000367772.8 protein_coding 169893788,169888676,169878634,169875978,169873696,169870255,169868928,169866896,169864369,169862613,169859041,169855796,169854270,169853074 169893959,169888890,169878819,169876091,169873752,169870357,169869039,169866973,169864508,169862797,169859212,169855957,169854964,169853772 Gene ID= ENSG00000000457.13 TPM= 1.81 Transcript Type= protein_coding chr1 169921076 170074727 169921076 170074727 - transcript7174.chr1.nnic@KIFAP3 transcript7174.chr1.nnic protein_coding 170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169925787,169921076 170074727,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169925855,169921781 Gene ID= ENSG00000075945.12 TPM= 5.43 Transcript Type= NA chr1 169921326 170074695 169921326 170074695 - ENST00000361580.6@KIFAP3 ENST00000361580.6 protein_coding 170074436,170055305,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326 170074695,170055436,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781 Gene ID= ENSG00000075945.12 TPM= 66.56 Transcript Type= protein_coding chr1 169921326 170074588 169921326 170074588 - ENST00000367767.5@KIFAP3 ENST00000367767.5 protein_coding 170074436,170046712,170039233,170038290,170035454,170034372,170031886,170024418,170016462,169992155,169984582,169983270,169982702,169981972,169978085,169972513,169961046,169954011,169921326 170074588,170046866,170039288,170038431,170035553,170034496,170031984,170024596,170016624,169992255,169984690,169983382,169982867,169982097,169978183,169972598,169961235,169954110,169921781 Gene ID= ENSG00000075945.12 TPM= 1.36 Transcript Type= protein_coding chr1 170460453 170538279 170460453 170538279 - transcript7190.chr1.nnic@AL354732.1 transcript7190.chr1.nnic antisense_RNA 170538199,170517594,170460453 170538279,170517703,170462419 Gene ID= ENSG00000231407.5 TPM= 2.72 Transcript Type= NA chr1 170532131 170553833 170532131 170553833 + transcript7181.chr1.nnic@GORAB transcript7181.chr1.nnic protein_coding 170532131,170533464,170539210,170542491,170544705,170552015 170532284,170533651,170539571,170542592,170544845,170553833 Gene ID= ENSG00000120370.12 TPM= 2.04 Transcript Type= NA chr1 170532127 170553443 170532127 170553443 + transcript7186.chr1.nic@GORAB transcript7186.chr1.nic protein_coding 170532127,170539210,170542491,170544705,170552015 170532284,170539571,170542592,170544845,170553443 Gene ID= ENSG00000120370.12 TPM= 2.94 Transcript Type= NA chr1 170532129 170553446 170532129 170553446 + ENST00000367763.7@GORAB ENST00000367763.7 protein_coding 170532129,170539210,170542491,170544705,170552015 170532284,170539567,170542592,170544845,170553446 Gene ID= ENSG00000120370.12 TPM= 13.36 Transcript Type= protein_coding chr1 170532151 170553446 170532151 170553446 + ENST00000498166.5@GORAB ENST00000498166.5 protein_coding 170532151,170533464,170536310,170539210,170542491,170544705,170552015 170532284,170533651,170536421,170539567,170542592,170544845,170553446 Gene ID= ENSG00000120370.12 TPM= 1.58 Transcript Type= nonsense_mediated_decay chr1 171185195 171212601 171185195 171212601 + transcript7195.chr1.nnic@FMO2 transcript7195.chr1.nnic protein_coding 171185195,171185708,171193335,171196649,171199346,171203865,171205279,171207718,171208794,171210800 171185359,171185845,171193523,171196811,171199488,171204064,171205634,171207790,171210717,171212601 Gene ID= ENSG00000094963.13 TPM= 56.44 Transcript Type= NA chr1 171185195 171211229 171185195 171211229 + transcript7196.chr1.nnic@FMO2 transcript7196.chr1.nnic protein_coding 171185195,171185708,171193335,171196649,171199346,171203865,171205279,171207718,171208794,171210852 171185359,171185845,171193523,171196811,171199488,171204064,171205634,171207790,171210770,171211229 Gene ID= ENSG00000094963.13 TPM= 4.83 Transcript Type= NA chr1 171185195 171211230 171185195 171211230 + transcript7198.chr1.nnic@FMO2 transcript7198.chr1.nnic protein_coding 171185195,171185708,171193335,171196649,171199346,171203865,171205279,171207718,171208794,171210934 171185359,171185845,171193523,171196811,171199488,171204064,171205634,171207790,171210852,171211230 Gene ID= ENSG00000094963.13 TPM= 3.92 Transcript Type= NA chr1 171258081 171285973 171258081 171285973 + transcript7202.chr1.nic@FMO1 transcript7202.chr1.nic protein_coding 171258081,171267543,171275346,171278729,171280786,171281978,171283144,171285202 171258219,171267731,171275508,171278871,171280985,171282065,171283216,171285973 Gene ID= ENSG00000010932.16 TPM= 1.81 Transcript Type= NA chr1 171257957 171285974 171257957 171285974 + ENST00000354841.4@FMO1 ENST00000354841.4 protein_coding 171257957,171267543,171275346,171278729,171280786,171281978,171283144,171285202 171258219,171267731,171275508,171278871,171280985,171282333,171283216,171285974 Gene ID= ENSG00000010932.16 TPM= 7.24 Transcript Type= protein_coding chr1 171314234 171342084 171314234 171342084 + ENST00000367749.3@FMO4 ENST00000367749.3 protein_coding 171314234,171316186,171319818,171323004,171324138,171331640,171332709,171334411,171337356,171341413 171314413,171316327,171319957,171323192,171324300,171331782,171332908,171334763,171337425,171342084 Gene ID= ENSG00000076258.9 TPM= 3.62 Transcript Type= protein_coding chr1 171485530 171532918 171485530 171532918 + transcript7210.chr1.nic@PRRC2C transcript7210.chr1.nic protein_coding 171485530,171512032,171512995,171514536,171515734,171517591,171522177,171523221,171523435,171524821,171527791,171532343 171485735,171512200,171513172,171514645,171515859,171517814,171522259,171523354,171523522,171524965,171527844,171532918 Gene ID= ENSG00000117523.15 TPM= 8.15 Transcript Type= NA chr1 171635417 171652683 171635417 171652683 - ENST00000037502.10@MYOC ENST00000037502.10 protein_coding 171652008,171638597,171635417 171652683,171638722,171636709 Gene ID= ENSG00000034971.16 TPM= 1.81 Transcript Type= protein_coding chr1 171700160 171742247 171700160 171742247 - ENST00000236192.11@VAMP4 ENST00000236192.11 protein_coding 171741910,171738349,171728524,171719171,171710714,171709665,171706367,171700160 171742247,171738463,171728570,171719221,171710814,171709744,171706418,171704534 Gene ID= ENSG00000117533.14 TPM= 27.17 Transcript Type= protein_coding chr1 171724910 171742087 171724910 171742087 - transcript7223.chr1.nnic@VAMP4 transcript7223.chr1.nnic protein_coding 171741910,171738349,171728524,171724910 171742087,171738463,171728570,171728082 Gene ID= ENSG00000117533.14 TPM= 2.72 Transcript Type= NA chr1 171781682 171797717 171781682 171797717 + ENST00000362019.7@METTL13 ENST00000362019.7 protein_coding 171781682,171783740,171785879,171787735,171790452,171792017,171794396,171796482 171781795,171784499,171786078,171787930,171790616,171792235,171794527,171797717 Gene ID= ENSG00000010165.19 TPM= 3.02 Transcript Type= protein_coding chr1 171781670 171797721 171781670 171797721 + transcript7232.chr1.nic@METTL13 transcript7232.chr1.nic protein_coding 171781670,171783740,171785879,171787735,171792017,171794396,171796482 171782120,171784499,171786078,171787930,171792235,171794527,171797721 Gene ID= ENSG00000010165.19 TPM= 6.64 Transcript Type= NA chr1 171781702 171797717 171781702 171797717 + ENST00000361735.3@METTL13 ENST00000361735.3 protein_coding 171781702,171783740,171785879,171787735,171790452,171792017,171794396,171796482 171782120,171784499,171786078,171787930,171790616,171792235,171794527,171797717 Gene ID= ENSG00000010165.19 TPM= 51.01 Transcript Type= protein_coding chr1 171841449 172418461 171841449 172418461 + transcript7237.chr1.nic@DNM3 transcript7237.chr1.nic protein_coding 171841449,171921748,171987656,171988945,172032402,172033105,172038319,172042009,172044385,172048612,172068819,172081832,172092824,172093696,172131175,172253573,172308728,172379018,172387133,172388573,172418281 171841817,171921821,171987805,171989148,172032500,172033265,172038461,172042144,172044452,172048750,172068905,172081902,172092875,172093725,172131288,172253682,172308839,172379182,172387359,172388809,172418461 Gene ID= ENSG00000197959.13 TPM= 2.72 Transcript Type= NA chr1 171817886 172418461 171817886 172418461 + transcript7239.chr1.nnic@DNM3 transcript7239.chr1.nnic protein_coding 171817886,171921748,171987656,171988945,172032402,172033105,172038319,172042009,172044385,172048612,172068819,172081832,172092824,172131175,172253573,172308728,172379018,172387133,172388573,172418281 171818043,171921821,171987805,171989148,172032500,172033265,172038461,172042144,172044452,172048750,172068905,172081902,172092875,172131288,172253682,172308839,172379182,172387359,172388809,172418461 Gene ID= ENSG00000197959.13 TPM= 2.26 Transcript Type= NA chr1 171841498 172133392 171841498 172133392 + ENST00000367733.6@DNM3 ENST00000367733.6 protein_coding 171841498,171921748,171987656,171988945,172032402,172033105,172038319,172042009,172044385,172048612,172068819,172081832,172092824,172131175,172132889 171841817,171921821,171987805,171989148,172032500,172033265,172038461,172042144,172044452,172048750,172068905,172081902,172092875,172131288,172133392 Gene ID= ENSG00000197959.13 TPM= 2.72 Transcript Type= protein_coding chr1 172138399 172144794 172138399 172144794 - transcript7253.chr1.nnic@DNM3OS transcript7253.chr1.nnic antisense_RNA 172144558,172144365,172142136,172138399 172144794,172144437,172142213,172140596 Gene ID= ENSG00000230630.4 TPM= 1.81 Transcript Type= NA chr1 172138589 172144793 172138589 172144793 - transcript7257.chr1.nic@DNM3OS transcript7257.chr1.nic antisense_RNA 172144365,172142136,172138589 172144793,172142213,172140596 Gene ID= ENSG00000230630.4 TPM= 1.81 Transcript Type= NA chr1 172393132 172444092 172393132 172444092 - transcript7258.chr1.nnic@PIGC transcript7258.chr1.nnic protein_coding 172443988,172399819,172393132 172444092,172399916,172394410 Gene ID= ENSG00000135845.9 TPM= 2.72 Transcript Type= NA chr1 172441457 172444060 172441457 172444060 - ENST00000344529.4@PIGC ENST00000344529.4 protein_coding 172443988,172441457 172444060,172442830 Gene ID= ENSG00000135845.9 TPM= 41.66 Transcript Type= protein_coding chr1 172533142 172611833 172533142 172611833 + transcript7265.chr1.nic@SUCO transcript7265.chr1.nic protein_coding 172533142,172551512,172555869,172557280,172557644,172569019,172570047,172570663,172573891,172575518,172577539,172577764,172578298,172579202,172585018,172585858,172588760,172590984,172600064,172602064,172602696,172608747,172609816 172533497,172551626,172556023,172557417,172557794,172569142,172570171,172570730,172573998,172575623,172577559,172577819,172578389,172579267,172585086,172585948,172589926,172591071,172600168,172602218,172602787,172608802,172611833 Gene ID= ENSG00000094975.13 TPM= 3.92 Transcript Type= NA chr1 172533217 172611831 172533217 172611831 + ENST00000263688.3@SUCO ENST00000263688.3 protein_coding 172533217,172551512,172553260,172555869,172557280,172557644,172569019,172570047,172570663,172573891,172575518,172577539,172577764,172578298,172579202,172585018,172585858,172588760,172590984,172600064,172602064,172602696,172608747,172609816 172533497,172551626,172553370,172556023,172557417,172557794,172569142,172570171,172570730,172573998,172575623,172577559,172577819,172578389,172579267,172585086,172585948,172589926,172591071,172600168,172602218,172602787,172608802,172611831 Gene ID= ENSG00000094975.13 TPM= 3.02 Transcript Type= protein_coding chr1 173183735 173207313 173183735 173207313 - ENST00000281834.3@TNFSF4 ENST00000281834.3 protein_coding 173207024,173188521,173183735 173207313,173188569,173186865 Gene ID= ENSG00000117586.10 TPM= 2.72 Transcript Type= protein_coding chr1 173477266 173488807 173477266 173488807 + ENST00000340385.5@PRDX6 ENST00000340385.5 protein_coding 173477266,173481326,173485361,173486255,173487735 173477492,173481482,173485507,173486401,173488807 Gene ID= ENSG00000117592.8 TPM= 366.29 Transcript Type= protein_coding chr1 173714938 173786696 173714938 173786696 + transcript7281.chr1.nic@KLHL20 transcript7281.chr1.nic protein_coding 173714938,173715523,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163 173715078,173715654,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786696 Gene ID= ENSG00000076321.10 TPM= 3.17 Transcript Type= NA chr1 173714937 173786824 173714937 173786824 + transcript7283.chr1.nic@KLHL20 transcript7283.chr1.nic protein_coding 173714937,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163 173715654,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786824 Gene ID= ENSG00000076321.10 TPM= 9.51 Transcript Type= NA chr1 173714984 173786702 173714984 173786702 + ENST00000209884.4@KLHL20 ENST00000209884.4 protein_coding 173714984,173716003,173733713,173751764,173753213,173755923,173756976,173766146,173774305,173775634,173782124,173785163 173715078,173716066,173734286,173751922,173753307,173756038,173757159,173766289,173774438,173775842,173782230,173786702 Gene ID= ENSG00000076321.10 TPM= 17.21 Transcript Type= protein_coding chr1 173799552 173824848 173799552 173824848 - transcript7298.chr1.nic@CENPL transcript7298.chr1.nic protein_coding 173824212,173823926,173811132,173807267,173802963,173799552 173824848,173824019,173811306,173807518,173803505,173800519 Gene ID= ENSG00000120334.15 TPM= 5.43 Transcript Type= NA chr1 173824503 173858546 173824503 173858546 + ENST00000361951.4@DARS2 ENST00000361951.4 protein_coding 173824503,173826687,173828333,173830660,173831535,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173853349,173853795,173856666,173857518 173825356,173826786,173828399,173830761,173831630,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173853567,173853905,173856741,173858546 Gene ID= ENSG00000117593.9 TPM= 6.34 Transcript Type= protein_coding chr1 173824503 173858544 173824503 173858544 + transcript7292.chr1.nnic@DARS2 transcript7292.chr1.nnic protein_coding 173824503,173826687,173828333,173830660,173833376,173834473,173836940,173838190,173839367,173840866,173845229,173850327,173853349,173853795,173856666,173857518 173825356,173826786,173828399,173830761,173833499,173834519,173837046,173838259,173839546,173840973,173845291,173850479,173853567,173853905,173856741,173858544 Gene ID= ENSG00000117593.9 TPM= 9.06 Transcript Type= NA chr1 173863896 173868010 173863896 173868010 - transcript7300.chr1.nic@GAS5 transcript7300.chr1.nic processed_transcript 173867960,173866991,173866761,173866528,173866177,173865857,173865510,173865229,173864675,173864484,173864257,173863896 173868010,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075 Gene ID= ENSG00000234741.7 TPM= 46.64 Transcript Type= NA chr1 173863896 173868010 173863896 173868010 - transcript7307.chr1.nic@GAS5 transcript7307.chr1.nic processed_transcript 173867960,173866991,173866528,173866177,173865857,173864257,173863896 173868010,173867043,173866796,173866206,173865894,173865547,173864075 Gene ID= ENSG00000234741.7 TPM= 2.72 Transcript Type= NA chr1 173863901 173867987 173863901 173867987 - ENST00000450589.5@GAS5 ENST00000450589.5 processed_transcript 173867960,173866991,173866761,173866528,173866177,173865857,173865471,173865229,173864675,173864484,173864257,173863901 173867987,173867043,173866796,173866567,173866206,173865894,173865547,173865282,173864704,173864506,173864304,173864075 Gene ID= ENSG00000234741.7 TPM= 39.39 Transcript Type= lincRNA chr1 174159481 174394146 174159481 174394146 + transcript7313.chr1.nic@RABGAP1L transcript7313.chr1.nic protein_coding 174159481,174219125,174220972,174231145,174241483,174250475,174252480,174272414,174275833,174278613,174304986,174370979,174393995 174159657,174219295,174221164,174231355,174241657,174250632,174252590,174272480,174275935,174278779,174305127,174371072,174394146 Gene ID= ENSG00000152061.23 TPM= 3.62 Transcript Type= NA chr1 175012958 175023425 175012958 175023425 - ENST00000476371.1@MRPS14 ENST00000476371.1 protein_coding 175023364,175018418,175012958 175023425,175018576,175014851 Gene ID= ENSG00000120333.4 TPM= 48.9 Transcript Type= protein_coding chr1 175944829 176207289 175944829 176207289 - transcript7335.chr1.nic@RFWD2 transcript7335.chr1.nic protein_coding 176206572,176184633,176175910,176163827,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944829 176207289,176184692,176176007,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170 Gene ID= ENSG00000143207.19 TPM= 20.83 Transcript Type= NA chr1 175944831 176207493 175944831 176207493 - ENST00000367669.7@RFWD2 ENST00000367669.7 protein_coding 176206572,176184633,176175910,176163815,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831 176207493,176184692,176176007,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170 Gene ID= ENSG00000143207.19 TPM= 35.32 Transcript Type= protein_coding chr1 175944831 176207289 175944831 176207289 - transcript7337.chr1.nic@RFWD2 transcript7337.chr1.nic protein_coding 176206572,176184633,176163815,176162869,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944831 176207289,176184692,176163891,176162988,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170 Gene ID= ENSG00000143207.19 TPM= 1.81 Transcript Type= NA chr1 175944599 176207289 175944599 176207289 - transcript7339.chr1.nic@RFWD2 transcript7339.chr1.nic protein_coding 176206572,176184633,176175910,176163815,176162869,176149006,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944599 176207289,176184692,176176007,176163891,176162988,176149074,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170 Gene ID= ENSG00000143207.19 TPM= 8.15 Transcript Type= NA chr1 175944832 176207289 175944832 176207289 - transcript7347.chr1.nnic@RFWD2 transcript7347.chr1.nnic protein_coding 176206572,176184633,176149006,176136488,176135010,176116624,176085776,176081152,176046181,176043710,176043186,176027572,175989362,175988288,175986943,175947195,175944832 176207289,176184692,176149074,176136547,176135086,176116681,176085890,176081287,176046324,176043818,176043267,176027688,175989479,175988412,175987103,175947239,175945170 Gene ID= ENSG00000143207.19 TPM= 3.62 Transcript Type= NA chr1 176868818 177164937 176868818 177164937 - transcript7355.chr1.nnic@ASTN1 transcript7355.chr1.nnic protein_coding 177164394,177061078,177032456,177030806,177029634,177024583,177023404,177014791,176965163,176958345,176957678,176949185,176945926,176943891,176936266,176934152,176894562,176888071,176884339,176882859,176876537,176868818 177164937,177061265,177032849,177030952,177029741,177024732,177023571,177014875,176965237,176958482,176957828,176949351,176946120,176944018,176936370,176934292,176894830,176888204,176884490,176882994,176876637,176869027 Gene ID= ENSG00000152092.15 TPM= 2.72 Transcript Type= NA chr1 176868817 177164905 176868817 177164905 - transcript7357.chr1.nnic@ASTN1 transcript7357.chr1.nnic protein_coding 177164394,177061078,177032456,177030806,177029634,177024583,177023380,177014791,176965163,176958345,176957678,176949185,176945926,176943891,176936266,176934152,176894562,176888071,176884339,176882859,176876537,176868817 177164905,177061265,177032849,177030952,177029741,177024732,177023571,177014875,176965237,176958482,176957828,176949351,176946120,176944018,176936370,176934340,176894830,176888204,176884490,176882994,176876637,176869027 Gene ID= ENSG00000152092.15 TPM= 4.53 Transcript Type= NA chr1 176857302 177164867 176857302 177164867 - ENST00000367657.7@ASTN1 ENST00000367657.7 protein_coding 177164394,177061078,177032456,177030806,177029634,177024583,177023404,177014791,176965163,176958345,176957678,176949185,176945926,176943891,176936266,176934152,176894562,176888071,176884339,176882859,176876537,176868844,176857302 177164867,177061265,177032849,177030952,177029741,177024732,177023571,177014875,176965237,176958482,176957828,176949351,176946120,176944018,176936370,176934340,176894830,176888204,176884490,176882994,176876637,176869027,176857650 Gene ID= ENSG00000152092.15 TPM= 17.21 Transcript Type= protein_coding chr1 176861067 177164690 176861067 177164690 - ENST00000361833.6@ASTN1 ENST00000361833.6 protein_coding 177164394,177061078,177032456,177030806,177029634,177024583,177023404,177014791,176965163,176958345,176957678,176949185,176945926,176943891,176936266,176934152,176894562,176888071,176884339,176882859,176876537,176868844,176861067 177164690,177061265,177032849,177030952,177029741,177024732,177023571,177014875,176965237,176958482,176957828,176949351,176946120,176944018,176936370,176934340,176894830,176888204,176884490,176882994,176876637,176869027,176864521 Gene ID= ENSG00000152092.15 TPM= 2.72 Transcript Type= protein_coding chr1 176868813 177164683 176868813 177164683 - ENST00000424564.2@ASTN1 ENST00000424564.2 protein_coding 177164394,177061078,177032456,177030806,177029634,177024583,177023404,177014791,176965163,176958345,176957678,176949185,176945926,176943891,176936266,176934152,176894562,176888071,176884339,176882859,176876537,176868813 177164683,177061265,177032849,177030952,177029741,177024732,177023571,177014875,176965237,176958482,176957828,176949351,176946120,176944018,176936370,176934340,176894830,176888204,176884490,176882994,176876637,176869027 Gene ID= ENSG00000152092.15 TPM= 11.77 Transcript Type= protein_coding chr1 177170892 177282312 177170892 177282312 + transcript7365.chr1.nnic@BRINP2 transcript7365.chr1.nnic protein_coding 177170892,177229801,177255919,177257176,177273488,177275083,177276198,177278563,177280412 177171732,177230145,177256109,177257384,177273593,177275180,177276434,177278785,177282312 Gene ID= ENSG00000198797.6 TPM= 2.72 Transcript Type= NA chr1 177170920 177282421 177170920 177282421 + transcript7366.chr1.nnic@BRINP2 transcript7366.chr1.nnic protein_coding 177170920,177209597,177229801,177255919,177257176,177273488,177276198,177278563,177280412 177171732,177209710,177230145,177256109,177257384,177273593,177276434,177278785,177282421 Gene ID= ENSG00000198797.6 TPM= 9.06 Transcript Type= NA chr1 177170958 177282312 177170958 177282312 + transcript7367.chr1.nnic@BRINP2 transcript7367.chr1.nnic protein_coding 177170958,177171661,177229801,177255919,177257176,177273488,177276198,177278563,177280412 177171144,177171732,177230145,177256109,177257384,177273593,177276434,177278785,177282312 Gene ID= ENSG00000198797.6 TPM= 1.81 Transcript Type= NA chr1 177170958 177282312 177170958 177282312 + transcript7372.chr1.nnic@BRINP2 transcript7372.chr1.nnic protein_coding 177170958,177229801,177255919,177257176,177273488,177276198,177278563,177280412 177171144,177230145,177256109,177257384,177273593,177276434,177278785,177282312 Gene ID= ENSG00000198797.6 TPM= 1.81 Transcript Type= NA chr1 177171497 177282422 177171497 177282422 + ENST00000361539.4@BRINP2 ENST00000361539.4 protein_coding 177171497,177229801,177255919,177257176,177273488,177276198,177278563,177280412 177171732,177230145,177256109,177257384,177273593,177276434,177278785,177282422 Gene ID= ENSG00000198797.6 TPM= 7.24 Transcript Type= protein_coding chr1 178006141 178037990 178006141 178037990 - transcript7380.chr1.nic@AL359075.1 transcript7380.chr1.nic transcribed_unitary_pseudogene 178037897,178037694,178034705,178033027,178032430,178031551,178026155,178022440,178006141 178037990,178037801,178034801,178033085,178032495,178031660,178026255,178022668,178008149 Gene ID= ENSG00000242193.10 TPM= 11.77 Transcript Type= NA chr1 178006142 178037990 178006142 178037990 - transcript7382.chr1.nnic@AL359075.1 transcript7382.chr1.nnic transcribed_unitary_pseudogene 178037897,178037694,178034705,178033027,178032430,178031551,178026155,178006142 178037990,178037801,178034801,178033085,178032495,178031660,178026255,178008149 Gene ID= ENSG00000242193.10 TPM= 1.81 Transcript Type= NA chr1 178006136 178037950 178006136 178037950 - ENST00000476232.6@AL359075.1 ENST00000476232.6 transcribed_unitary_pseudogene 178037897,178037694,178034705,178033027,178032430,178031551,178026155,178024404,178022440,178006136 178037950,178037801,178034801,178033085,178032495,178031660,178026255,178024486,178022668,178008149 Gene ID= ENSG00000242193.10 TPM= 3.62 Transcript Type= processed_transcript chr1 178849706 178869332 178849706 178869332 - transcript7398.chr1.nic@ANGPTL1 transcript7398.chr1.nic protein_coding 178869114,178864954,178853594,178852683,178849706 178869332,178865802,178853787,178852953,178851316 Gene ID= ENSG00000116194.12 TPM= 25.65 Transcript Type= NA chr1 178849705 178871052 178849705 178871052 - ENST00000234816.6@ANGPTL1 ENST00000234816.6 protein_coding 178870741,178869114,178864954,178853594,178852683,178849705 178871052,178869223,178865802,178853787,178852953,178851316 Gene ID= ENSG00000116194.12 TPM= 25.65 Transcript Type= protein_coding chr1 178850624 178871022 178850624 178871022 - ENST00000367629.1@ANGPTL1 ENST00000367629.1 protein_coding 178870741,178864954,178853594,178852683,178850624 178871022,178865802,178853787,178852953,178851316 Gene ID= ENSG00000116194.12 TPM= 1.2 Transcript Type= protein_coding chr1 179025896 179076562 179025896 179076562 + ENST00000263733.4@FAM20B ENST00000263733.4 protein_coding 179025896,179043715,179050279,179054529,179063927,179064305,179066800,179071913 179026098,179044224,179050365,179054638,179064098,179064496,179066859,179076562 Gene ID= ENSG00000116199.11 TPM= 11.77 Transcript Type= protein_coding chr1 179081377 179095996 179081377 179095996 + ENST00000367627.7@TOR3A ENST00000367627.7 protein_coding 179081377,179082940,179085628,179087911,179094093,179094968 179082387,179083053,179085893,179088089,179094217,179095996 Gene ID= ENSG00000186283.13 TPM= 78.51 Transcript Type= protein_coding chr1 179082052 179095995 179082052 179095995 + transcript7414.chr1.nic@TOR3A transcript7414.chr1.nic protein_coding 179082052,179082940,179087911,179094093,179094968 179082387,179083053,179088089,179094217,179095995 Gene ID= ENSG00000186283.13 TPM= 6.67 Transcript Type= NA chr1 179082038 179095995 179082038 179095995 + transcript7415.chr1.nic@TOR3A transcript7415.chr1.nic protein_coding 179082038,179085628,179087911,179094093,179094968 179083053,179085893,179088089,179094217,179095995 Gene ID= ENSG00000186283.13 TPM= 4.26 Transcript Type= NA chr1 179293714 179358677 179293714 179358677 + ENST00000539888.5@SOAT1 ENST00000539888.5 protein_coding 179293714,179323437,179335506,179337837,179339438,179341028,179342114,179342862,179343590,179344947,179347600,179348844,179350296,179351317,179353585 179293936,179323495,179335657,179337896,179339545,179341310,179342192,179342943,179343635,179345076,179347697,179348942,179350431,179351462,179358677 Gene ID= ENSG00000057252.12 TPM= 9.73 Transcript Type= protein_coding chr1 179840907 179877805 179840907 179877805 - transcript7442.chr1.nnic@TOR1AIP2 transcript7442.chr1.nnic protein_coding 179877693,179877239,179865436,179856058,179852632,179850845,179847535,179840907 179877805,179877373,179865854,179856170,179852811,179851363,179847636,179846828 Gene ID= ENSG00000169905.12 TPM= 17.66 Transcript Type= NA chr1 179840907 179877805 179840907 179877805 - transcript7443.chr1.nnic@TOR1AIP2 transcript7443.chr1.nnic protein_coding 179877693,179877239,179856058,179852632,179850845,179847535,179840907 179877805,179877373,179856170,179852811,179851363,179847636,179846828 Gene ID= ENSG00000169905.12 TPM= 14.94 Transcript Type= NA chr1 179862438 179877805 179862438 179877805 - transcript7448.chr1.nnic@TOR1AIP2 transcript7448.chr1.nnic protein_coding 179877693,179877239,179863714,179862438 179877805,179877373,179865854,179862946 Gene ID= ENSG00000169905.12 TPM= 5.43 Transcript Type= NA chr1 180154812 180198035 180154812 180198035 + transcript7456.chr1.nic@QSOX1 transcript7456.chr1.nic protein_coding 180154812,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333 180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196890,180198035 Gene ID= ENSG00000116260.16 TPM= 35.32 Transcript Type= NA chr1 180154897 180198034 180154897 180198034 + ENST00000367600.5@QSOX1 ENST00000367600.5 protein_coding 180154897,180166491,180175321,180175931,180178794,180182174,180183916,180186053,180189552,180190433,180194213,180196262,180197333 180155172,180166591,180175366,180176033,180178884,180182319,180184050,180186182,180189674,180190580,180194392,180196599,180198034 Gene ID= ENSG00000116260.16 TPM= 48.9 Transcript Type= protein_coding chr1 180270672 180502621 180270672 180502621 - transcript7464.chr1.nnic@ACBD6 transcript7464.chr1.nnic protein_coding 180502045,180495461,180492269,180430180,180413366,180314692,180288270,180281306,180274651,180273937,180270672 180502621,180495525,180492365,180430262,180413471,180314722,180288517,180281386,180275412,180274112,180273572 Gene ID= ENSG00000230124.6 TPM= 2.72 Transcript Type= NA chr1 180288218 180502832 180288218 180502832 - transcript7469.chr1.nnic@ACBD6 transcript7469.chr1.nnic protein_coding 180502045,180430180,180413366,180397516,180314692,180288218 180502832,180430262,180413471,180397605,180314722,180288517 Gene ID= ENSG00000230124.6 TPM= 1.81 Transcript Type= NA chr1 180288230 180502954 180288230 180502954 - ENST00000367595.3@ACBD6 ENST00000367595.3 protein_coding 180502045,180495461,180492269,180430180,180413366,180397516,180314692,180288230 180502954,180495525,180492365,180430262,180413471,180397605,180314722,180288517 Gene ID= ENSG00000230124.6 TPM= 28.07 Transcript Type= protein_coding chr1 180632004 180890251 180632004 180890251 + ENST00000367590.8@XPR1 ENST00000367590.8 protein_coding 180632004,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522,180863708,180873803,180880076,180884006 180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180836716,180863874,180873942,180880297,180890251 Gene ID= ENSG00000143324.13 TPM= 17.21 Transcript Type= protein_coding chr1 180632006 180838869 180632006 180838869 + transcript7475.chr1.nic@XPR1 transcript7475.chr1.nic protein_coding 180632006,180682360,180787753,180803388,180806062,180806474,180811407,180824753,180825165,180834874,180836522 180632270,180682411,180787854,180803611,180806211,180806557,180811488,180824943,180825344,180835045,180838869 Gene ID= ENSG00000143324.13 TPM= 2.72 Transcript Type= NA chr1 180949693 181022925 180949693 181022925 - transcript7477.chr1.nnic@STX6 transcript7477.chr1.nnic protein_coding 181022639,181005294,181002606,180993363,180989984,180988239,180984677,180949693 181022925,181005463,181002700,180993425,180990109,180988345,180984771,180950918 Gene ID= ENSG00000135823.13 TPM= 1.81 Transcript Type= NA chr1 180973029 181022925 180973029 181022925 - transcript7480.chr1.nnic@STX6 transcript7480.chr1.nnic protein_coding 181022639,181005220,180993363,180989984,180988239,180984677,180973029 181022925,181005463,180993425,180990109,180988345,180984771,180976646 Gene ID= ENSG00000135823.13 TPM= 4.07 Transcript Type= NA chr1 180972725 181022911 180972725 181022911 - ENST00000258301.5@STX6 ENST00000258301.5 protein_coding 181022639,181005294,181002606,180993363,180989984,180988239,180984677,180972725 181022911,181005463,181002700,180993425,180990109,180988345,180984771,180976646 Gene ID= ENSG00000135823.13 TPM= 32.15 Transcript Type= protein_coding chr1 181033425 181061938 181033425 181061938 + ENST00000614012.4@MR1 ENST00000614012.4 protein_coding 181033425,181033887,181049052,181050011,181052235,181053573,181055225 181033464,181034074,181049312,181050286,181052510,181053677,181061938 Gene ID= ENSG00000153029.14 TPM= 6.34 Transcript Type= protein_coding chr1 181033425 181061938 181033425 181061938 + ENST00000617803.4@MR1 ENST00000617803.4 protein_coding 181033425,181033887,181049052,181050011,181053573,181055225 181033464,181034074,181049312,181050286,181053677,181061938 Gene ID= ENSG00000153029.14 TPM= 11.77 Transcript Type= protein_coding chr1 182381704 182392206 182381704 182392206 - ENST00000331872.10@GLUL ENST00000331872.10 protein_coding 182391679,182388572,182387131,182386256,182385760,182385357,182381704 182392206,182388750,182387292,182386402,182385887,182385556,182384723 Gene ID= ENSG00000135821.17 TPM= 374.44 Transcript Type= protein_coding chr1 182382894 182391792 182382894 182391792 - ENST00000339526.8@GLUL ENST00000339526.8 protein_coding 182390497,182388572,182387131,182386256,182385760,182385357,182382894 182391792,182388750,182387292,182386402,182385887,182385556,182384723 Gene ID= ENSG00000135821.17 TPM= 14.94 Transcript Type= protein_coding chr1 182573634 182589256 182573634 182589256 - ENST00000367559.7@RNASEL ENST00000367559.7 protein_coding 182589167,182585327,182584081,182582053,182581225,182576256,182573634 182589256,182586970,182584166,182582258,182581357,182576389,182575578 Gene ID= ENSG00000135828.11 TPM= 30.79 Transcript Type= protein_coding chr1 182581500 182589276 182581500 182589276 - transcript7494.chr1.nic@RNASEL transcript7494.chr1.nic protein_coding 182589167,182585327,182584081,182581500 182589276,182586970,182584166,182582258 Gene ID= ENSG00000135828.11 TPM= 1.81 Transcript Type= NA chr1 182598623 182604408 182598623 182604408 - ENST00000367558.5@RGS16 ENST00000367558.5 protein_coding 182604216,182603229,182602420,182601966,182598623 182604408,182603339,182602484,182602132,182600513 Gene ID= ENSG00000143333.6 TPM= 17.21 Transcript Type= protein_coding chr1 182789711 182831013 182789711 182831013 + transcript7503.chr1.nic@NPL transcript7503.chr1.nic protein_coding 182789711,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182828724 182789805,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182831013 Gene ID= ENSG00000135838.13 TPM= 18.72 Transcript Type= NA chr1 182789773 182830805 182789773 182830805 + transcript7505.chr1.nnic@NPL transcript7505.chr1.nnic protein_coding 182789773,182792232,182794356,182795730,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182825781,182828724 182789904,182792286,182794439,182795840,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182825820,182830805 Gene ID= ENSG00000135838.13 TPM= 1.97 Transcript Type= NA chr1 182789773 182830467 182789773 182830467 + transcript7506.chr1.nnic@NPL transcript7506.chr1.nnic protein_coding 182789773,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182828724 182789904,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830467 Gene ID= ENSG00000135838.13 TPM= 2.42 Transcript Type= NA chr1 182789773 182830803 182789773 182830803 + transcript7507.chr1.nic@NPL transcript7507.chr1.nic protein_coding 182789773,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182825781,182828724 182789805,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182825820,182830803 Gene ID= ENSG00000135838.13 TPM= 9.21 Transcript Type= NA chr1 182789773 182831013 182789773 182831013 + transcript7508.chr1.nnic@NPL transcript7508.chr1.nnic protein_coding 182789773,182792232,182794356,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182825781,182828724 182789904,182792286,182794439,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182825820,182831013 Gene ID= ENSG00000135838.13 TPM= 5.59 Transcript Type= NA chr1 182789777 182830383 182789777 182830383 + transcript7511.chr1.nic@NPL transcript7511.chr1.nic protein_coding 182789777,182803698,182806145,182812156,182814783,182816714,182818541,182818813,182822115,182825781,182828724 182789805,182803771,182806232,182812213,182814858,182816806,182818689,182818859,182822199,182825820,182830383 Gene ID= ENSG00000135838.13 TPM= 1.97 Transcript Type= NA chr1 182839306 182887979 182839306 182887979 + transcript7514.chr1.nic@DHX9 transcript7514.chr1.nic protein_coding 182839306,182842545,182843294,182852233,182853306,182854030,182855577,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083 182839456,182842677,182843434,182852344,182853418,182854178,182855713,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887979 Gene ID= ENSG00000135829.16 TPM= 5.43 Transcript Type= NA chr1 182839369 182887751 182839369 182887751 + ENST00000367549.3@DHX9 ENST00000367549.3 protein_coding 182839369,182842545,182843294,182852233,182853306,182854030,182856532,182858104,182858551,182858733,182859040,182859993,182866444,182866961,182872337,182874854,182876050,182876447,182876830,182878021,182879250,182880497,182881264,182881520,182883139,182883520,182884613,182887083 182839456,182842677,182843434,182852344,182853418,182854178,182856578,182858240,182858640,182858894,182859117,182860184,182866585,182867043,182872493,182874954,182876263,182876541,182876903,182878173,182879410,182880608,182881425,182881647,182883368,182883635,182884813,182887751 Gene ID= ENSG00000135829.16 TPM= 67.92 Transcript Type= protein_coding chr1 183023197 183117161 183023197 183117161 + transcript7525.chr1.nic@LAMC1 transcript7525.chr1.nic protein_coding 183023197,183103328,183108276,183110488,183114531,183115520,183116577,183116767 183024134,183103632,183108406,183110654,183114719,183115637,183116675,183117161 Gene ID= ENSG00000135862.5 TPM= 8.15 Transcript Type= NA chr1 183023460 183145592 183023460 183145592 + ENST00000258341.4@LAMC1 ENST00000258341.4 protein_coding 183023460,183103328,183108276,183110488,183114531,183115520,183116577,183116767,183117320,183117534,183118034,183121723,183122063,183124631,183125397,183126120,183127226,183128594,183130344,183131299,183132400,183133406,183134660,183135042,183136386,183137669,183140404,183142534 183024134,183103632,183108406,183110654,183114719,183115637,183116675,183116903,183117442,183117723,183118146,183121944,183122251,183124876,183125550,183126262,183127404,183128750,183130549,183131378,183132537,183133550,183134809,183135156,183136585,183137827,183140503,183145592 Gene ID= ENSG00000135862.5 TPM= 22.64 Transcript Type= protein_coding chr1 183472478 183554193 183472478 183554193 + ENST00000367537.7@SMG7 ENST00000367537.7 protein_coding 183472478,183502253,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183547103,183549208,183549764,183550751,183551045,183551818 183472649,183502391,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183547252,183549288,183549923,183550921,183551190,183554193 Gene ID= ENSG00000116698.21 TPM= 1.81 Transcript Type= protein_coding chr1 183472502 183554186 183472502 183554186 + ENST00000347615.6@SMG7 ENST00000347615.6 protein_coding 183472502,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183549208,183549764,183550751,183551045,183551818 183472649,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542502,183544497,183545312,183546337,183549288,183549923,183550921,183551190,183554186 Gene ID= ENSG00000116698.21 TPM= 1.81 Transcript Type= protein_coding chr1 183472527 183554190 183472527 183554190 + ENST00000515829.6@SMG7 ENST00000515829.6 protein_coding 183472527,183512837,183515874,183517688,183526596,183527956,183528892,183529398,183533164,183533676,183537145,183538380,183540984,183542076,183544353,183544930,183545966,183549208,183549764,183550751,183551045,183551818 183472649,183512868,183515991,183517820,183526767,183528027,183529042,183529533,183533326,183533832,183537215,183538440,183541103,183542364,183544497,183545312,183546337,183549288,183549923,183550921,183551190,183554190 Gene ID= ENSG00000116698.21 TPM= 2.72 Transcript Type= protein_coding chr1 183877553 183928547 183877553 183928547 + transcript7544.chr1.nnic@RGL1 transcript7544.chr1.nnic protein_coding 183877553,183880616,183883786,183884723,183888474,183892077,183897808,183900150,183902568,183904850,183907012,183912082,183916447,183922222,183926105 183877917,183880800,183883910,183884938,183888577,183892161,183897897,183900236,183902600,183904971,183907101,183912268,183916701,183922336,183928547 Gene ID= ENSG00000143344.15 TPM= 15.85 Transcript Type= NA chr1 183805120 183928531 183805120 183928531 + ENST00000360851.3@RGL1 ENST00000360851.3 protein_coding 183805120,183806375,183847566,183865996,183880616,183883786,183884723,183888474,183892077,183897808,183900150,183902568,183904850,183907012,183912082,183916447,183922222,183926105 183805324,183806485,183847774,183866073,183880800,183883910,183884938,183888577,183892161,183897897,183900236,183902600,183904971,183907101,183912268,183916701,183922336,183928531 Gene ID= ENSG00000143344.15 TPM= 69.27 Transcript Type= protein_coding chr1 183935837 184037729 183935837 184037729 - ENST00000361927.8@COLGALT2 ENST00000361927.8 protein_coding 184037095,183978410,183975097,183973616,183969269,183963901,183954762,183951007,183945432,183944196,183940581,183935837 184037729,183978520,183975214,183973750,183969473,183964020,183954838,183951113,183945564,183944323,183940787,183939037 Gene ID= ENSG00000198756.10 TPM= 3.62 Transcript Type= protein_coding chr1 184051652 184095845 184051652 184095845 + transcript7552.chr1.nnic@TSEN15 transcript7552.chr1.nnic protein_coding 184051652,184054354,184054728,184095690 184051890,184054435,184054863,184095845 Gene ID= ENSG00000198860.11 TPM= 9.06 Transcript Type= NA chr1 184051677 184074212 184051677 184074212 + ENST00000361641.5@TSEN15 ENST00000361641.5 protein_coding 184051677,184054354,184054728,184072157,184072827 184051890,184054435,184054863,184072298,184074212 Gene ID= ENSG00000198860.11 TPM= 6.34 Transcript Type= protein_coding chr1 184051746 184074206 184051746 184074206 + ENST00000423085.6@TSEN15 ENST00000423085.6 protein_coding 184051746,184054354,184054728,184072827 184051890,184054435,184054863,184074206 Gene ID= ENSG00000198860.11 TPM= 5.43 Transcript Type= protein_coding chr1 184387029 184622073 184387029 184622073 + transcript7564.chr1.nnic@C1orf21 transcript7564.chr1.nnic protein_coding 184387029,184477386,184590739,184598401,184619518 184387368,184477603,184590815,184598461,184622073 Gene ID= ENSG00000116667.12 TPM= 8.15 Transcript Type= NA chr1 184690231 184754913 184690231 184754913 - ENST00000318130.12@EDEM3 ENST00000318130.12 protein_coding 184754489,184749547,184737611,184737025,184734531,184732837,184726255,184723751,184721289,184719443,184719162,184717540,184716888,184712433,184711723,184710394,184708153,184706643,184702811,184690231 184754913,184749592,184737711,184737064,184734643,184732990,184726389,184723856,184721386,184719568,184719245,184717623,184717012,184712598,184711877,184710547,184708344,184706808,184702996,184694472 Gene ID= ENSG00000116406.18 TPM= 16.3 Transcript Type= protein_coding chr1 184791030 184974550 184791030 184974550 - ENST00000367511.3@FAM129A ENST00000367511.3 protein_coding 184974302,184899179,184894075,184890108,184884633,184831847,184823638,184823167,184818638,184808074,184805946,184803585,184798079,184791030 184974550,184899309,184894206,184890222,184884800,184831962,184823742,184823329,184818825,184808235,184806056,184803692,184798190,184796097 Gene ID= ENSG00000135842.16 TPM= 3.62 Transcript Type= protein_coding chr1 185045341 185102052 185045341 185102052 + transcript7572.chr1.nnic@RNF2 transcript7572.chr1.nnic protein_coding 185045341,185071580,185087552,185091579,185093061,185098072,185099791,185100200 185045649,185071696,185087640,185091739,185093276,185098344,185099962,185102052 Gene ID= ENSG00000121481.10 TPM= 2.72 Transcript Type= NA chr1 185045489 185101057 185045489 185101057 + transcript7573.chr1.nnic@RNF2 transcript7573.chr1.nnic protein_coding 185045489,185087552,185091565,185093061,185098072,185099791,185100200 185045649,185087640,185091739,185093276,185098344,185099962,185101057 Gene ID= ENSG00000121481.10 TPM= 3.62 Transcript Type= NA chr1 185119343 185157071 185119343 185157071 - transcript7575.chr1.nnic@TRMT1L transcript7575.chr1.nnic protein_coding 185156478,185151825,185150379,185147182,185145439,185143906,185143357,185139973,185139367,185137606,185137442,185128669,185124944,185123857,185120383,185119343 185157071,185151935,185150492,185147246,185145568,185144029,185143436,185140222,185139579,185137796,185137506,185128747,185125110,185123919,185120509,185120271 Gene ID= ENSG00000121486.11 TPM= 1.81 Transcript Type= NA chr1 185118098 185156981 185118098 185156981 - ENST00000367506.9@TRMT1L ENST00000367506.9 protein_coding 185156478,185151825,185150379,185147182,185145439,185143906,185143357,185139973,185139367,185137606,185128669,185124944,185123857,185120383,185118098 185156981,185151935,185150492,185147246,185145568,185144029,185143436,185140222,185139579,185137796,185128747,185125110,185123919,185120509,185120271 Gene ID= ENSG00000121486.11 TPM= 36.22 Transcript Type= protein_coding chr1 185296391 185317345 185296391 185317345 - transcript7585.chr1.nic@IVNS1ABP transcript7585.chr1.nic protein_coding 185316953,185311095,185309383,185309003,185308800,185307489,185307014,185305536,185301434,185300972,185300437,185300217,185299999,185299710,185296391 185317345,185311322,185309511,185309172,185308875,185307662,185307139,185306625,185301563,185301196,185300558,185300343,185300130,185299883,185298288 Gene ID= ENSG00000116679.15 TPM= 5.43 Transcript Type= NA chr1 185296388 185317329 185296388 185317329 - ENST00000367498.7@IVNS1ABP ENST00000367498.7 protein_coding 185316953,185311095,185309383,185309003,185308800,185307489,185307014,185305536,185301434,185300972,185300437,185300217,185299999,185299710,185296388 185317329,185311322,185309511,185309172,185308875,185307662,185307139,185305643,185301563,185301196,185300558,185300343,185300130,185299883,185298288 Gene ID= ENSG00000116679.15 TPM= 61.58 Transcript Type= protein_coding chr1 186312361 186375697 186312361 186375697 - transcript7589.chr1.nic@TPR transcript7589.chr1.nic protein_coding 186375559,186374878,186373359,186370970,186367886,186363342,186362837,186362288,186361789,186361622,186360765,186360273,186359799,186358543,186357397,186356286,186355635,186355410,186353688,186351976,186351330,186350223,186347292,186346135,186345580,186344375,186343906,186343326,186341252,186341028,186339642,186338033,186337013,186336496,186335338,186335068,186334325,186333122,186332195,186331498,186327460,186326104,186325764,186323686,186322518,186322318,186320312,186318733,186318447,186317482,186314629,186312361 186375697,186375186,186373463,186371043,186367982,186363445,186363001,186362380,186361869,186361709,186360905,186360364,186359996,186358650,186357623,186356449,186355768,186355558,186353850,186352110,186351470,186350388,186347458,186346287,186345696,186344578,186344090,186343473,186341389,186341159,186339772,186338243,186337156,186336694,186335543,186335129,186334533,186333394,186332343,186331581,186327660,186326235,186325854,186323870,186322586,186322412,186320418,186318828,186318603,186317600,186314724,186314026 Gene ID= ENSG00000047410.13 TPM= 7.24 Transcript Type= NA chr1 186375842 186421373 186375842 186421373 + transcript7598.chr1.nnic@C1orf27 transcript7598.chr1.nnic protein_coding 186375842,186379767,186383022,186385988,186388442,186389588,186390711,186391696,186393947,186398313,186398954,186406083,186417544,186419009,186420088 186375974,186379884,186383156,186386083,186388548,186389624,186390851,186391791,186394015,186398441,186399044,186406268,186417654,186419077,186421373 Gene ID= ENSG00000157181.15 TPM= 4.53 Transcript Type= NA chr1 186375869 186421378 186375869 186421378 + ENST00000287859.10@C1orf27 ENST00000287859.10 protein_coding 186375869,186379767,186383022,186385988,186388442,186389588,186390711,186391696,186393947,186398313,186398954,186406083,186417544,186419009 186375974,186379884,186383156,186386083,186388548,186389624,186390851,186391791,186394015,186398441,186399044,186406268,186417654,186421378 Gene ID= ENSG00000157181.15 TPM= 27.17 Transcript Type= protein_coding chr1 186828953 186988981 186828953 186988981 + ENST00000367466.3@PLA2G4A ENST00000367466.3 protein_coding 186828953,186854286,186870435,186893011,186894098,186906965,186911248,186932763,186939008,186939980,186946637,186946869,186950657,186956102,186965409,186977593,186979315,186988377 186829035,186854387,186870516,186893159,186894211,186907002,186911389,186932899,186939230,186940094,186946774,186946961,186950728,186956344,186965593,186977788,186979472,186988981 Gene ID= ENSG00000116711.9 TPM= 10.87 Transcript Type= protein_coding chr1 192158457 192185815 192158457 192185815 + ENST00000367460.3@RGS18 ENST00000367460.3 protein_coding 192158457,192159220,192160378,192181292,192184297 192158756,192159321,192160439,192181458,192185815 Gene ID= ENSG00000150681.9 TPM= 1.81 Transcript Type= protein_coding chr1 192809041 192812283 192809041 192812283 + ENST00000235382.6@RGS2 ENST00000235382.6 protein_coding 192809041,192810166,192810370,192810981,192811402 192809181,192810267,192810431,192811147,192812283 Gene ID= ENSG00000116741.7 TPM= 301.55 Transcript Type= protein_coding chr1 193014334 193059397 193014334 193059397 - transcript7623.chr1.nic@UCHL5 transcript7623.chr1.nic protein_coding 193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193014334 193059397,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193020381,193016395 Gene ID= ENSG00000116750.13 TPM= 1.81 Transcript Type= NA chr1 193012250 193059496 193012250 193059496 - ENST00000367455.8@UCHL5 ENST00000367455.8 protein_coding 193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193012250 193059496,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023039,193021195,193016395 Gene ID= ENSG00000116750.13 TPM= 27.17 Transcript Type= protein_coding chr1 193018405 193059409 193018405 193059409 - ENST00000367449.5@UCHL5 ENST00000367449.5 protein_coding 193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193018405 193059409,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193018820 Gene ID= ENSG00000116750.13 TPM= 1.36 Transcript Type= protein_coding chr1 193018405 193059361 193018405 193059361 - ENST00000367448.5@UCHL5 ENST00000367448.5 protein_coding 193059185,193051754,193049746,193029532,193029388,193029179,193028085,193023844,193022926,193021097,193020307,193018405 193059361,193051817,193049851,193029657,193029449,193029309,193028148,193023946,193023036,193021195,193020381,193018820 Gene ID= ENSG00000116750.13 TPM= 1.36 Transcript Type= protein_coding chr1 193059562 193091774 193059562 193091774 + transcript7637.chr1.nic@TROVE2 transcript7637.chr1.nic protein_coding 193059562,193069034,193070554,193075820,193076501,193076913,193081364,193082186,193082562,193084579 193059776,193069634,193070619,193076040,193076647,193077050,193081480,193082299,193082708,193091774 Gene ID= ENSG00000116747.12 TPM= 10.57 Transcript Type= NA chr1 193059623 193091774 193059623 193091774 + transcript7638.chr1.nic@TROVE2 transcript7638.chr1.nic protein_coding 193059623,193059874,193069034,193075820,193076501,193076913,193081364,193082186,193082562,193084579 193059776,193060222,193069634,193076040,193076647,193077050,193081480,193082299,193082708,193091774 Gene ID= ENSG00000116747.12 TPM= 8.76 Transcript Type= NA chr1 193059562 193091774 193059562 193091774 + transcript7640.chr1.nnic@TROVE2 transcript7640.chr1.nnic protein_coding 193059562,193069034,193076501,193076913,193081364,193082186,193082562,193084579 193059776,193069634,193076647,193077050,193081480,193082299,193082708,193091774 Gene ID= ENSG00000116747.12 TPM= 8.76 Transcript Type= NA chr1 193096468 193105431 193096468 193105431 - ENST00000367439.7@GLRX2 ENST00000367439.7 protein_coding 193105264,193101141,193097584,193096468 193105431,193101204,193097760,193096759 Gene ID= ENSG00000023572.8 TPM= 24.45 Transcript Type= protein_coding chr1 193122017 193253901 193122017 193253901 + ENST00000367435.3@CDC73 ENST00000367435.3 protein_coding 193122017,193125112,193130174,193135391,193135537,193138085,193141850,193147867,193150304,193152380,193203795,193212065,193212390,193232993,193236256,193249730,193250676 193122331,193125217,193130243,193135453,193135589,193138173,193142066,193147965,193150382,193152444,193203852,193212100,193212477,193233154,193236356,193249871,193253901 Gene ID= ENSG00000134371.10 TPM= 38.94 Transcript Type= protein_coding chr1 196652043 196754574 196652043 196754574 + transcript7649.chr1.nnic@CFH transcript7649.chr1.nnic protein_coding 196652043,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196713735,196715593,196725121,196726470,196726761,196728346,196736824,196737475,196740619,196741875,196743452,196745817,196747111,196752072 196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196713917,196715769,196725297,196726652,196726940,196728522,196737006,196737660,196740792,196742051,196743628,196745999,196747197,196754574 Gene ID= ENSG00000000971.15 TPM= 1.81 Transcript Type= NA chr1 196651878 196747504 196651878 196747504 + ENST00000367429.8@CFH ENST00000367429.8 protein_coding 196651878,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196713735,196715593,196725121,196726470,196726761,196728346,196736824,196737475,196740619,196741875,196743452,196745817,196747111 196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196713917,196715769,196725297,196726652,196726940,196728522,196737006,196737660,196740792,196742051,196743628,196745999,196747504 Gene ID= ENSG00000000971.15 TPM= 47.09 Transcript Type= protein_coding chr1 196652045 196701566 196652045 196701566 + ENST00000630130.2@CFH ENST00000630130.2 protein_coding 196652045,196672978,196673857,196675989,196677476,196679623,196685064,196689420,196690063,196701318 196652175,196673163,196673962,196676065,196677667,196679793,196685237,196689614,196690239,196701566 Gene ID= ENSG00000000971.15 TPM= 5.43 Transcript Type= protein_coding chr1 197902647 197907367 197902647 197907367 + ENST00000367393.7@C1orf53 ENST00000367393.7 protein_coding 197902647,197905796,197907149 197902913,197905897,197907367 Gene ID= ENSG00000203724.10 TPM= 10.87 Transcript Type= protein_coding chr1 198156980 198322416 198156980 198322416 + transcript7664.chr1.nic@NEK7 transcript7664.chr1.nic protein_coding 198156980,198220999,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198297127,198319412 198157276,198221110,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198297240,198322416 Gene ID= ENSG00000151414.14 TPM= 18.2 Transcript Type= NA chr1 198156963 198322420 198156963 198322420 + ENST00000367385.8@NEK7 ENST00000367385.8 protein_coding 198156963,198232553,198253040,198262575,198264125,198277961,198278954,198292945,198297127,198319412 198157276,198232637,198253180,198262637,198264235,198278069,198279061,198293039,198297240,198322420 Gene ID= ENSG00000151414.14 TPM= 205.65 Transcript Type= protein_coding chr1 198156794 198322416 198156794 198322416 + transcript7671.chr1.nnic@NEK7 transcript7671.chr1.nnic protein_coding 198156794,198232553,198262575,198264125,198277961,198278954,198292945,198297127,198319412 198157276,198232637,198262637,198264235,198278069,198279061,198293039,198297240,198322416 Gene ID= ENSG00000151414.14 TPM= 11.41 Transcript Type= NA chr1 198156998 198322383 198156998 198322383 + transcript7679.chr1.nnic@NEK7 transcript7679.chr1.nnic protein_coding 198156998,198232553,198253040,198262575,198264125,198319412 198157276,198232637,198253180,198262637,198264235,198322383 Gene ID= ENSG00000151414.14 TPM= 15.85 Transcript Type= NA chr1 198639095 198757196 198639095 198757196 + transcript7681.chr1.nic@PTPRC transcript7681.chr1.nic protein_coding 198639095,198639226,198692347,198699564,198703298,198704472,198706734,198708133,198709687,198712953,198716682,198718094,198722416,198728340,198729137,198731617,198732300,198732480,198734196,198734328,198735127,198741869,198742232,198744054,198748109,198749416,198750492,198752249,198752594,198754269,198755906 198639137,198639341,198692373,198699704,198703372,198704498,198706952,198708261,198709824,198713072,198716840,198718302,198722476,198728448,198729171,198731726,198732390,198732556,198734232,198734425,198735252,198742026,198742367,198744203,198748199,198749549,198750626,198752371,198752772,198754404,198757196 Gene ID= ENSG00000081237.18 TPM= 1.81 Transcript Type= NA chr1 198639095 198757283 198639095 198757283 + ENST00000348564.10@PTPRC ENST00000348564.10 protein_coding 198639095,198639226,198692347,198703298,198704472,198706734,198708133,198709687,198712953,198716682,198718094,198722416,198728340,198729137,198731617,198732300,198732480,198734196,198734328,198735127,198741869,198742232,198744054,198748109,198749416,198750492,198752249,198752594,198754269,198755906 198639137,198639341,198692373,198703372,198704498,198706952,198708261,198709824,198713072,198716840,198718302,198722476,198728448,198729171,198731726,198732390,198732556,198734232,198734425,198735252,198742026,198742367,198744203,198748199,198749549,198750626,198752371,198752772,198754404,198757283 Gene ID= ENSG00000081237.18 TPM= 5.43 Transcript Type= protein_coding chr1 200039551 200177411 200039551 200177411 + transcript7684.chr1.nic@NR5A2 transcript7684.chr1.nic protein_coding 200039551,200043774,200045443,200048172,200111202,200120808,200173963 200039795,200043892,200045584,200048818,200111321,200120955,200177411 Gene ID= ENSG00000116833.13 TPM= 1.81 Transcript Type= NA chr1 200404940 200410056 200404940 200410056 - ENST00000294740.3@ZNF281 ENST00000294740.3 protein_coding 200409946,200404940 200410056,200409719 Gene ID= ENSG00000162702.7 TPM= 8.15 Transcript Type= protein_coding chr1 200640816 200669996 200640816 200669996 - transcript7693.chr1.nic@DDX59 transcript7693.chr1.nic protein_coding 200669767,200665937,200663919,200659027,200650425,200649074,200648439,200640816 200669996,200666751,200664086,200659116,200650676,200649226,200648567,200641256 Gene ID= ENSG00000118197.13 TPM= 4.53 Transcript Type= NA chr1 200644035 200669922 200644035 200669922 - transcript7698.chr1.nnic@DDX59 transcript7698.chr1.nnic protein_coding 200669767,200665937,200663919,200659027,200649074,200648439,200644035 200669922,200666751,200664086,200659116,200649226,200648567,200644517 Gene ID= ENSG00000118197.13 TPM= 2.72 Transcript Type= NA chr1 200644038 200669996 200644038 200669996 - transcript7699.chr1.nnic@DDX59 transcript7699.chr1.nnic protein_coding 200669767,200665937,200663919,200659027,200650425,200649074,200644038 200669996,200666751,200664086,200659116,200650676,200649226,200644517 Gene ID= ENSG00000118197.13 TPM= 2.72 Transcript Type= NA chr1 200644039 200669969 200644039 200669969 - ENST00000331314.10@DDX59 ENST00000331314.10 protein_coding 200669767,200665937,200663919,200659027,200650425,200649074,200648439,200644039 200669969,200666751,200664086,200659116,200650676,200649226,200648567,200644517 Gene ID= ENSG00000118197.13 TPM= 33.51 Transcript Type= protein_coding chr1 200739558 200860704 200739558 200860704 + ENST00000358823.6@CAMSAP2 ENST00000358823.6 protein_coding 200739558,200760839,200807376,200815561,200832200,200832706,200841994,200844782,200847210,200847640,200848032,200852541,200853275,200854817,200856010,200857306,200857754 200739966,200761098,200807537,200815644,200832341,200832845,200842087,200844869,200847292,200847709,200850234,200852677,200853495,200854889,200856125,200857424,200860704 Gene ID= ENSG00000118200.14 TPM= 10.87 Transcript Type= protein_coding chr1 201134773 201154440 201134773 201154440 - ENST00000367330.5@TMEM9 ENST00000367330.5 protein_coding 201153858,201151761,201146740,201143820,201134773 201154440,201151852,201146848,201143951,201135815 Gene ID= ENSG00000116857.16 TPM= 26.26 Transcript Type= protein_coding chr1 201134773 201154501 201134773 201154501 - ENST00000367332.5@TMEM9 ENST00000367332.5 protein_coding 201154445,201153849,201151761,201146740,201143820,201134773 201154501,201153959,201151852,201146848,201143951,201135815 Gene ID= ENSG00000116857.16 TPM= 13.58 Transcript Type= protein_coding chr1 201465493 201469410 201465493 201469410 - transcript7712.chr1.nnic@PHLDA3 transcript7712.chr1.nnic protein_coding 201468341,201467486,201465493 201469410,201467583,201466178 Gene ID= ENSG00000174307.6 TPM= 1.81 Transcript Type= NA chr1 201464383 201469184 201464383 201469184 - ENST00000367311.4@PHLDA3 ENST00000367311.4 protein_coding 201468341,201464383 201469184,201466178 Gene ID= ENSG00000174307.6 TPM= 57.95 Transcript Type= protein_coding chr1 201483530 201509456 201483530 201509456 - ENST00000367306.5@CSRP1 ENST00000367306.5 protein_coding 201509437,201507070,201496192,201490176,201488855,201485283,201483530 201509456,201507412,201496304,201490344,201488984,201485376,201484789 Gene ID= ENSG00000159176.13 TPM= 201.03 Transcript Type= protein_coding chr1 201829141 201876976 201829141 201876976 + transcript7716.chr1.nic@IPO9 transcript7716.chr1.nic protein_coding 201829141,201834954,201847279,201847552,201848393,201852104,201853011,201854595,201854823,201855124,201855783,201857096,201858447,201858855,201863448,201866733,201868648,201869590,201870583,201871161,201872828,201874250,201874832,201875152,201875944 201829372,201835064,201847340,201847638,201848594,201852192,201853097,201854714,201854923,201855182,201855934,201857194,201858553,201858994,201863607,201866959,201868796,201869718,201870858,201871327,201872961,201874372,201874936,201875228,201876976 Gene ID= ENSG00000198700.9 TPM= 10.87 Transcript Type= NA chr1 201829141 201884294 201829141 201884294 + ENST00000361565.8@IPO9 ENST00000361565.8 protein_coding 201829141,201847279,201847552,201848393,201852104,201853011,201854595,201854823,201855124,201855783,201857096,201858447,201858855,201863448,201866733,201868648,201869590,201870583,201871161,201872828,201874250,201874832,201875152,201875944 201829372,201847340,201847638,201848594,201852192,201853097,201854714,201854923,201855182,201855934,201857194,201858553,201858994,201863607,201866959,201868796,201869718,201870858,201871327,201872961,201874372,201874936,201875228,201884294 Gene ID= ENSG00000198700.9 TPM= 46.18 Transcript Type= protein_coding chr1 201888576 201899977 201888576 201899977 + transcript7723.chr1.nnic@SHISA4 transcript7723.chr1.nnic protein_coding 201888576,201889445,201890454,201891401,201891800,201893554,201899730 201889067,201889616,201890587,201891568,201892506,201893727,201899977 Gene ID= ENSG00000198892.6 TPM= 5.43 Transcript Type= NA chr1 201888677 201899977 201888677 201899977 + transcript7724.chr1.nnic@SHISA4 transcript7724.chr1.nnic protein_coding 201888677,201889445,201890454,201891401,201891800,201893554,201899730 201888781,201889616,201890587,201891568,201892506,201893727,201899977 Gene ID= ENSG00000198892.6 TPM= 10.87 Transcript Type= NA chr1 201888708 201892306 201888708 201892306 + ENST00000362011.6@SHISA4 ENST00000362011.6 protein_coding 201888708,201889445,201890454,201891401,201891800 201889067,201889616,201890587,201891568,201892306 Gene ID= ENSG00000198892.6 TPM= 112.29 Transcript Type= protein_coding chr1 201896450 201946583 201896450 201946583 - transcript7739.chr1.nnic@LMOD1 transcript7739.chr1.nnic protein_coding 201946160,201899233,201896450 201946583,201900751,201898398 Gene ID= ENSG00000163431.12 TPM= 8.15 Transcript Type= NA chr1 201896452 201946587 201896452 201946587 - ENST00000367288.4@LMOD1 ENST00000367288.4 protein_coding 201946080,201899237,201896452 201946587,201900751,201898398 Gene ID= ENSG00000163431.12 TPM= 140.36 Transcript Type= protein_coding chr1 201982598 202006180 201982598 202006180 + transcript7756.chr1.nic@RNPEP transcript7756.chr1.nic protein_coding 201982598,201988904,201996147,201997319,201999902,202001376,202001659,202003237,202004354,202005558 201983113,201989044,201996263,201997554,202000015,202001488,202001767,202003461,202004496,202006180 Gene ID= ENSG00000176393.10 TPM= 6.53 Transcript Type= NA chr1 201982624 202006147 201982624 202006147 + ENST00000295640.8@RNPEP ENST00000295640.8 protein_coding 201982624,201988904,201989383,201996147,201997319,201999902,202001376,202001659,202003237,202004354,202005558 201983113,201989044,201989531,201996263,201997554,202000015,202001488,202001767,202003461,202004496,202006147 Gene ID= ENSG00000176393.10 TPM= 226.58 Transcript Type= protein_coding chr1 201982652 202006147 201982652 202006147 + ENST00000367286.7@RNPEP ENST00000367286.7 protein_coding 201982652,201988904,201989383,201997319,201999902,202001376,202001659,202003237,202004354,202005558 201983113,201989044,201989531,201997554,202000015,202001488,202001767,202003461,202004496,202006147 Gene ID= ENSG00000176393.10 TPM= 2 Transcript Type= protein_coding chr1 202133404 202144741 202133404 202144741 - ENST00000272217.6@ARL8A ENST00000272217.6 protein_coding 202144450,202138368,202137965,202135707,202135459,202135150,202133404 202144741,202138448,202138038,202135800,202135526,202135220,202134516 Gene ID= ENSG00000143862.7 TPM= 94.18 Transcript Type= protein_coding chr1 202147013 202161581 202147013 202161581 - ENST00000309017.7@PTPN7 ENST00000309017.7 protein_coding 202160545,202159281,202158118,202157739,202155533,202154186,202153725,202152542,202150311,202147013 202161581,202159454,202158301,202157823,202155609,202154323,202153835,202152699,202150424,202148699 Gene ID= ENSG00000143851.15 TPM= 10.41 Transcript Type= protein_coding chr1 202147013 202159991 202147013 202159991 - ENST00000367279.8@PTPN7 ENST00000367279.8 protein_coding 202159281,202158118,202157739,202155533,202154186,202153725,202152542,202150311,202147013 202159991,202158301,202157823,202155609,202154323,202153835,202152699,202150424,202148699 Gene ID= ENSG00000143851.15 TPM= 2.26 Transcript Type= protein_coding chr1 202331657 202341980 202331657 202341980 - ENST00000367274.8@UBE2T ENST00000367274.8 protein_coding 202341895,202335646,202334989,202333450,202333237,202333010,202331657 202341980,202335818,202335058,202333555,202333335,202333093,202331960 Gene ID= ENSG00000077152.9 TPM= 8.15 Transcript Type= protein_coding chr1 202348720 202438242 202348720 202438242 + ENST00000480184.5@PPP1R12B ENST00000480184.5 protein_coding 202348720,202416787,202422620,202425566,202427040,202428855,202430731,202431480,202434656,202437821 202349142,202416917,202422738,202425725,202427184,202428929,202430810,202431619,202434768,202438242 Gene ID= ENSG00000077157.21 TPM= 1.81 Transcript Type= protein_coding chr1 202724491 202809470 202724491 202809470 - ENST00000367265.7@KDM5B ENST00000367265.7 protein_coding 202808102,202777017,202774613,202773118,202766926,202764049,202762699,202760415,202758391,202756358,202755271,202752905,202750659,202748945,202746142,202745858,202742655,202742391,202741367,202740674,202736213,202735429,202733401,202731828,202730909,202729707,202724491 202809470,202777094,202774735,202773288,202767060,202764145,202762808,202760573,202758510,202756516,202755452,202753067,202750778,202749139,202746323,202745982,202742805,202742505,202741722,202740812,202736392,202735587,202733886,202731939,202731063,202730027,202729173 Gene ID= ENSG00000117139.16 TPM= 11.77 Transcript Type= protein_coding chr1 202878957 202889135 202878957 202889135 - ENST00000367262.3@RABIF ENST00000367262.3 protein_coding 202888973,202878957 202889135,202881223 Gene ID= ENSG00000183155.4 TPM= 21.73 Transcript Type= protein_coding chr1 202891123 202927271 202891123 202927271 - transcript7777.chr1.nic@KLHL12 transcript7777.chr1.nic protein_coding 202927089,202924968,202919755,202918171,202911054,202909010,202896854,202895522,202894591,202894184,202891123 202927271,202925207,202919908,202918388,202911203,202909124,202896960,202895717,202894749,202894282,202892659 Gene ID= ENSG00000117153.15 TPM= 1.81 Transcript Type= NA chr1 202891100 202927262 202891100 202927262 - ENST00000367261.7@KLHL12 ENST00000367261.7 protein_coding 202927089,202924968,202919755,202918171,202911054,202909010,202896854,202895522,202894591,202894184,202893239,202891100 202927262,202925207,202919908,202918388,202911203,202909124,202896960,202895717,202894749,202894282,202893425,202892659 Gene ID= ENSG00000117153.15 TPM= 27.17 Transcript Type= protein_coding chr1 202940823 202958389 202940823 202958389 - ENST00000340990.9@ADIPOR1 ENST00000340990.9 protein_coding 202958185,202950930,202948304,202946439,202944983,202943758,202942025,202940823 202958389,202951164,202948420,202946610,202945169,202943945,202942218,202941701 Gene ID= ENSG00000159346.12 TPM= 190.46 Transcript Type= protein_coding chr1 202961869 202967280 202961869 202967280 - ENST00000367249.8@CYB5R1 ENST00000367249.8 protein_coding 202967191,202966749,202966528,202965887,202965371,202964612,202963642,202963066,202961869 202967280,202966898,202966600,202965993,202965500,202964695,202963727,202963165,202962699 Gene ID= ENSG00000159348.12 TPM= 134.93 Transcript Type= protein_coding chr1 203007344 203023540 203007344 203023540 + transcript7793.chr1.nic@TMEM183A transcript7793.chr1.nic protein_coding 203007344,203007774,203008643,203014889,203015960,203017756,203018481,203020793,203022855 203007574,203007863,203008810,203015048,203016140,203017919,203018561,203020948,203023540 Gene ID= ENSG00000163444.11 TPM= 4.53 Transcript Type= NA chr1 203007397 203023539 203007397 203023539 + transcript7798.chr1.nic@TMEM183A transcript7798.chr1.nic protein_coding 203007397,203007774,203008643,203014889,203017756,203018481,203020793,203022855 203007574,203007863,203008810,203016140,203017919,203018561,203020948,203023539 Gene ID= ENSG00000163444.11 TPM= 1.81 Transcript Type= NA chr1 203007344 203023539 203007344 203023539 + transcript7799.chr1.nic@TMEM183A transcript7799.chr1.nic protein_coding 203007344,203007774,203008643,203014889,203018481,203020793,203022855 203007574,203007863,203008810,203016140,203018561,203020948,203023539 Gene ID= ENSG00000163444.11 TPM= 2.72 Transcript Type= NA chr1 203007388 203024847 203007388 203024847 + transcript7800.chr1.nic@TMEM183A transcript7800.chr1.nic protein_coding 203007388,203008643,203014889,203015960,203018481,203020793,203022855 203007863,203008810,203015048,203016140,203018561,203020948,203024847 Gene ID= ENSG00000163444.11 TPM= 6.34 Transcript Type= NA chr1 203007386 203024848 203007386 203024848 + ENST00000367242.3@TMEM183A ENST00000367242.3 protein_coding 203007386,203007774,203008643,203014889,203015960,203018481,203020793,203022855 203007574,203007863,203008810,203015048,203016140,203018561,203020948,203024848 Gene ID= ENSG00000163444.11 TPM= 66.1 Transcript Type= protein_coding chr1 203178931 203186749 203178931 203186749 - ENST00000255409.7@CHI3L1 ENST00000255409.7 protein_coding 203186599,203186316,203185184,203184576,203183641,203182731,203181162,203180470,203179761,203178931 203186749,203186345,203185385,203184632,203183791,203182852,203181285,203180652,203179877,203179585 Gene ID= ENSG00000133048.12 TPM= 1.81 Transcript Type= protein_coding chr1 203305536 203309602 203305536 203309602 + ENST00000290551.4@BTG2 ENST00000290551.4 protein_coding 203305536,203307104 203305748,203309602 Gene ID= ENSG00000159388.5 TPM= 153.94 Transcript Type= protein_coding chr1 203340628 203351489 203340628 203351489 - ENST00000354955.4@FMOD ENST00000354955.4 protein_coding 203351033,203347292,203340628 203351489,203348277,203342494 Gene ID= ENSG00000122176.10 TPM= 26.26 Transcript Type= protein_coding chr1 203475805 203489608 203475805 203489608 + transcript7812.chr1.nnic@PRELP transcript7812.chr1.nnic protein_coding 203475805,203483169,203486706 203475928,203484157,203489608 Gene ID= ENSG00000188783.5 TPM= 11.77 Transcript Type= NA chr1 203626802 203733629 203626802 203733629 + transcript7814.chr1.nic@ATP2B4 transcript7814.chr1.nic protein_coding 203626802,203682742,203698157,203699460,203700206,203700798,203702044,203703652,203707009,203707862,203709301,203710877,203711960,203713165,203714171,203720549,203721197,203722478,203723881,203727395,203733223 203627219,203683398,203698354,203699717,203700331,203700923,203702079,203703813,203707223,203708104,203709542,203711108,203712139,203713252,203714277,203720740,203721410,203722689,203723988,203727571,203733629 Gene ID= ENSG00000058668.14 TPM= 4.53 Transcript Type= NA chr1 203626561 203744081 203626561 203744081 + ENST00000357681.9@ATP2B4 ENST00000357681.9 protein_coding 203626561,203682742,203698157,203699460,203700206,203700798,203702044,203703652,203707009,203707862,203709301,203710877,203711960,203713165,203714171,203720549,203721197,203722478,203723881,203727395,203739546 203627219,203683398,203698354,203699717,203700331,203700923,203702079,203703813,203707223,203708104,203709542,203711108,203712139,203713252,203714277,203720740,203721410,203722689,203723988,203727571,203744081 Gene ID= ENSG00000058668.14 TPM= 42.56 Transcript Type= protein_coding chr1 203795616 203854125 203795616 203854125 + transcript7820.chr1.nnic@ZC3H11A transcript7820.chr1.nnic protein_coding 203795616,203801575,203802569,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141 203795794,203801628,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854125 Gene ID= ENSG00000058673.16 TPM= 5.05 Transcript Type= NA chr1 203795616 203854124 203795616 203854124 + transcript7821.chr1.nic@ZC3H11A transcript7821.chr1.nic protein_coding 203795616,203801575,203802652,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141 203795794,203801628,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854124 Gene ID= ENSG00000058673.16 TPM= 5.05 Transcript Type= NA chr1 203795616 203854124 203795616 203854124 + transcript7822.chr1.nic@ZC3H11A transcript7822.chr1.nic protein_coding 203795616,203801575,203802957,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141 203795794,203801628,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854124 Gene ID= ENSG00000058673.16 TPM= 4.83 Transcript Type= NA chr1 203795635 203854125 203795635 203854125 + transcript7825.chr1.nic@ZC3H11A transcript7825.chr1.nic protein_coding 203795635,203796293,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141 203795794,203796496,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854125 Gene ID= ENSG00000058673.16 TPM= 5.96 Transcript Type= NA chr1 203795660 203854121 203795660 203854121 + ENST00000367210.2@ZC3H11A ENST00000367210.2 protein_coding 203795660,203801575,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141 203795794,203803016,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854121 Gene ID= ENSG00000058673.16 TPM= 15.92 Transcript Type= protein_coding chr1 203795635 203854124 203795635 203854124 + transcript7832.chr1.nnic@ZBED6 transcript7832.chr1.nnic protein_coding 203795635,203816926,203818570,203828299,203829451,203829780,203830123,203831661,203833791,203837966,203840306,203847184,203848331,203849711,203850515,203851057,203852141 203795794,203817124,203818689,203828422,203829654,203829896,203830203,203831771,203833853,203838064,203840374,203847687,203848407,203850026,203850681,203851124,203854124 Gene ID= ENSG00000257315.2 TPM= 3.02 Transcript Type= NA chr1 203861603 203870084 203861603 203870084 + ENST00000475035.5@SNRPE ENST00000475035.5 protein_coding 203861603,203862182,203863663,203865041,203869877 203861743,203862222,203863725,203865119,203870084 Gene ID= ENSG00000182004.12 TPM= 1.81 Transcript Type= processed_transcript chr1 204131062 204152003 204131062 204152003 - ENST00000367202.8@ETNK2 ENST00000367202.8 protein_coding 204151595,204149703,204146642,204141315,204140035,204137104,204134515,204131062 204152003,204149962,204146764,204141457,204140118,204137249,204134588,204132256 Gene ID= ENSG00000143845.14 TPM= 12.68 Transcript Type= protein_coding chr1 204403387 204411791 204403387 204411791 - ENST00000367188.4@PPP1R15B ENST00000367188.4 protein_coding 204409492,204403387 204411791,204406313 Gene ID= ENSG00000158615.8 TPM= 24.45 Transcript Type= protein_coding chr1 204617170 204685733 204617170 204685733 - ENST00000367177.3@LRRN2 ENST00000367177.3 protein_coding 204685320,204617170 204685733,204620218 Gene ID= ENSG00000170382.11 TPM= 9.96 Transcript Type= protein_coding chr1 204828633 204984311 204828633 204984311 + transcript7855.chr1.nic@NFASC transcript7855.chr1.nic protein_coding 204828633,204920632,204944226,204950557,204952011,204954188,204954829,204957656,204968249,204968798,204970616,204973276,204974179,204974657,204975271,204976671,204977681,204978968,204979362,204980370,204981798,204984027 204828782,204920740,204944406,204950574,204952116,204954384,204954951,204957826,204968360,204968982,204970747,204973419,204974290,204974823,204975418,204976795,204977725,204979069,204979559,204980440,204982020,204984311 Gene ID= ENSG00000163531.15 TPM= 7.24 Transcript Type= NA chr1 204828695 204977139 204828695 204977139 + ENST00000403080.5@NFASC ENST00000403080.5 protein_coding 204828695,204920632,204944226,204950557,204952011,204954188,204954829,204957656,204968249,204968798,204970616,204973276,204974179,204974657,204975271,204976671 204828782,204920740,204944406,204950574,204952116,204954384,204954951,204957826,204968360,204968982,204970747,204973419,204974290,204974823,204975418,204977139 Gene ID= ENSG00000163531.15 TPM= 3.62 Transcript Type= protein_coding chr1 205086142 205122015 205086142 205122015 - ENST00000367164.1@RBBP5 ENST00000367164.1 protein_coding 205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094987,205086142 205122015,205115883,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815 Gene ID= ENSG00000117222.13 TPM= 5.43 Transcript Type= protein_coding chr1 205086142 205122015 205086142 205122015 - ENST00000264515.10@RBBP5 ENST00000264515.10 protein_coding 205121855,205115858,205114789,205105028,205103857,205101600,205100152,205099911,205099741,205098989,205097326,205096682,205094873,205086142 205122015,205115883,205114961,205105168,205104019,205101709,205100271,205100064,205099812,205099106,205097395,205096911,205095064,205088815 Gene ID= ENSG00000117222.13 TPM= 5.43 Transcript Type= protein_coding chr1 205142505 205211566 205142505 205211566 - ENST00000367162.7@DSTYK ENST00000367162.7 protein_coding 205211271,205187418,205169163,205163723,205162923,205162036,205161258,205160114,205159547,205157273,205150680,205148205,205142505 205211566,205187806,205169832,205163955,205163006,205162212,205161387,205160270,205159679,205157386,205150794,205148339,205147745 Gene ID= ENSG00000133059.16 TPM= 10.87 Transcript Type= protein_coding chr1 205228176 205273343 205228176 205273343 + ENST00000358024.7@TMCC2 ENST00000358024.7 protein_coding 205228176,205241505,205268950,205271120,205271813 205228771,205242044,205269884,205271255,205273343 Gene ID= ENSG00000133069.15 TPM= 4.98 Transcript Type= protein_coding chr1 205229732 205273343 205229732 205273343 + ENST00000495538.5@TMCC2 ENST00000495538.5 protein_coding 205229732,205241505,205268950,205271120,205271813 205230169,205242044,205269884,205271255,205273343 Gene ID= ENSG00000133069.15 TPM= 3.17 Transcript Type= processed_transcript chr1 205302059 205321791 205302059 205321791 - ENST00000367157.4@NUAK2 ENST00000367157.4 protein_coding 205321398,205311705,205308581,205308165,205306188,205305199,205302059 205321791,205311825,205308732,205308230,205306307,205305331,205304513 Gene ID= ENSG00000163545.8 TPM= 23.54 Transcript Type= protein_coding chr1 205336012 205357087 205336012 205357087 - transcript7879.chr1.nic@KLHDC8A transcript7879.chr1.nic protein_coding 205356533,205344134,205343229,205339644,205339194,205338495,205336012 205357087,205344458,205343793,205339808,205339409,205338596,205337592 Gene ID= ENSG00000162873.14 TPM= 16.08 Transcript Type= NA chr1 205336012 205357127 205336012 205357127 - transcript7881.chr1.nic@KLHDC8A transcript7881.chr1.nic protein_coding 205356988,205356533,205343229,205339644,205339194,205338495,205336012 205357127,205356569,205343793,205339808,205339409,205338596,205337592 Gene ID= ENSG00000162873.14 TPM= 14.58 Transcript Type= NA chr1 205336012 205344118 205336012 205344118 - transcript7885.chr1.nic@KLHDC8A transcript7885.chr1.nic protein_coding 205343229,205339644,205339194,205338495,205336012 205344118,205339808,205339409,205338596,205337592 Gene ID= ENSG00000162873.14 TPM= 9.15 Transcript Type= NA chr1 205336092 205356911 205336092 205356911 - ENST00000367155.7@KLHDC8A ENST00000367155.7 protein_coding 205356533,205343229,205339644,205339194,205338495,205336092 205356911,205343793,205339808,205339409,205338596,205337592 Gene ID= ENSG00000162873.14 TPM= 67.4 Transcript Type= protein_coding chr1 205373252 205387440 205373252 205387440 + ENST00000447832.1@LEMD1-AS1 ENST00000447832.1 antisense_RNA 205373252,205379054,205382027,205385233 205373434,205379325,205382144,205387440 Gene ID= ENSG00000226235.1 TPM= 3.62 Transcript Type= antisense_RNA chr1 205504599 205532793 205504599 205532793 + ENST00000360066.6@CDK18 ENST00000360066.6 protein_coding 205504599,205523147,205523483,205524232,205525139,205526065,205526367,205526775,205527794,205528048,205528999,205529324,205529521,205530259,205530628,205531344 205504878,205523297,205523625,205524357,205525195,205526179,205526461,205526837,205527917,205528168,205529096,205529429,205529563,205530349,205530705,205532793 Gene ID= ENSG00000117266.15 TPM= 12.68 Transcript Type= protein_coding chr1 205619268 205631962 205619268 205631962 - ENST00000289703.8@ELK4 ENST00000289703.8 protein_coding 205631632,205623676,205619268 205631962,205623891,205620838 Gene ID= ENSG00000158711.13 TPM= 2.72 Transcript Type= protein_coding chr1 205657852 205680068 205657852 205680068 - transcript7903.chr1.nnic@SLC45A3 transcript7903.chr1.nnic protein_coding 205679812,205664485,205662833,205662308,205661861,205657852 205680068,205664886,205663618,205662648,205662126,205659671 Gene ID= ENSG00000158715.5 TPM= 2.49 Transcript Type= NA chr1 205657852 205680462 205657852 205680462 - transcript7904.chr1.nnic@SLC45A3 transcript7904.chr1.nnic protein_coding 205680394,205664485,205662833,205662308,205661861,205657852 205680462,205664886,205663618,205662648,205662126,205659671 Gene ID= ENSG00000158715.5 TPM= 2.49 Transcript Type= NA chr1 205657852 205680068 205657852 205680068 - transcript7907.chr1.nnic@SLC45A3 transcript7907.chr1.nnic protein_coding 205679812,205664485,205662833,205661861,205657852 205680068,205664886,205663618,205662126,205659671 Gene ID= ENSG00000158715.5 TPM= 7.47 Transcript Type= NA chr1 205657851 205680459 205657851 205680459 - ENST00000367145.3@SLC45A3 ENST00000367145.3 protein_coding 205680394,205664485,205662833,205661861,205657851 205680459,205664886,205663618,205662126,205659671 Gene ID= ENSG00000158715.5 TPM= 6.57 Transcript Type= protein_coding chr1 205712819 205750276 205712819 205750276 - ENST00000367142.4@NUCKS1 ENST00000367142.4 protein_coding 205749957,205729572,205727700,205723926,205720501,205719527,205712819 205750276,205729621,205727805,205723981,205720653,205719676,205718479 Gene ID= ENSG00000069275.12 TPM= 118.63 Transcript Type= protein_coding chr1 205767983 205775457 205767983 205775457 - transcript7916.chr1.nnic@RAB29 transcript7916.chr1.nnic protein_coding 205775374,205774833,205772496,205771472,205770733,205767983 205775457,205774958,205772567,205771653,205770854,205770453 Gene ID= ENSG00000117280.12 TPM= 1.81 Transcript Type= NA chr1 205767983 205775479 205767983 205775479 - transcript7920.chr1.nnic@RAB29 transcript7920.chr1.nnic protein_coding 205775402,205774833,205772496,205771472,205770733,205767983 205775479,205775086,205772567,205771653,205770854,205770453 Gene ID= ENSG00000117280.12 TPM= 5.43 Transcript Type= NA chr1 205767983 205775479 205767983 205775479 - transcript7924.chr1.nnic@RAB29 transcript7924.chr1.nnic protein_coding 205775374,205772496,205771472,205770733,205767983 205775479,205772567,205771653,205770854,205770453 Gene ID= ENSG00000117280.12 TPM= 3.62 Transcript Type= NA chr1 205767986 205775446 205767986 205775446 - ENST00000367139.7@RAB29 ENST00000367139.7 protein_coding 205775273,205774833,205772496,205771472,205770733,205767986 205775446,205775086,205772567,205771653,205770854,205770453 Gene ID= ENSG00000117280.12 TPM= 18.11 Transcript Type= protein_coding chr1 205769437 205775449 205769437 205775449 - ENST00000235932.8@RAB29 ENST00000235932.8 protein_coding 205775374,205774833,205772496,205771472,205770733,205769437 205775449,205775086,205772567,205771653,205770854,205770453 Gene ID= ENSG00000117280.12 TPM= 1.81 Transcript Type= protein_coding chr1 205789093 205813176 205789093 205813176 - ENST00000367137.3@SLC41A1 ENST00000367137.3 protein_coding 205812808,205810070,205800953,205799759,205798957,205798669,205797904,205796924,205795344,205794870,205789093 205813176,205811087,205801060,205799830,205799101,205798815,205798051,205797003,205795478,205795018,205791718 Gene ID= ENSG00000133065.10 TPM= 28.07 Transcript Type= protein_coding chr1 206203513 206462747 206203513 206462747 + transcript7935.chr1.nic@SRGAP2 transcript7935.chr1.nic protein_coding 206203513,206205429,206303281,206342846,206384014,206392689,206393545,206401421,206405249,206406377,206415889,206419373,206421250,206430162,206436965,206437964,206439976,206446075,206450386,206453200,206454878,206458623,206461037 206203650,206206037,206303473,206343008,206384076,206392904,206393673,206401645,206405350,206406574,206415973,206419400,206421274,206430222,206437042,206438098,206440081,206446299,206450465,206453380,206455024,206458947,206462747 Gene ID= ENSG00000266028.7 TPM= 2.84 Transcript Type= NA chr1 206203513 206456159 206203513 206456159 + transcript7937.chr1.nic@SRGAP2 transcript7937.chr1.nic protein_coding 206203513,206205429,206303281,206342846,206384014,206392689,206393545,206401421,206405249,206406377,206415889,206419373,206421250,206430162,206436965,206437964,206439976,206446075,206450386,206453200,206454878,206455773 206203650,206206037,206303473,206343008,206384076,206392904,206393673,206401645,206405350,206406574,206415973,206419400,206421274,206430222,206437042,206438098,206440081,206446299,206450465,206453380,206455024,206456159 Gene ID= ENSG00000266028.7 TPM= 3.75 Transcript Type= NA chr1 206203513 206456158 206203513 206456158 + transcript7939.chr1.nic@SRGAP2 transcript7939.chr1.nic protein_coding 206203513,206205429,206303281,206342846,206384014,206392689,206393545,206401421,206405249,206406377,206415889,206419373,206421250,206430162,206436965,206437964,206439976,206446075,206450386,206453200,206454144 206203650,206206037,206303473,206343008,206384076,206392904,206393673,206401645,206405350,206406574,206415973,206419400,206421274,206430222,206437042,206438098,206440081,206446299,206450465,206453380,206456158 Gene ID= ENSG00000266028.7 TPM= 3.75 Transcript Type= NA chr1 206203513 206456158 206203513 206456158 + transcript7940.chr1.nic@SRGAP2 transcript7940.chr1.nic protein_coding 206203513,206205429,206303281,206342846,206384014,206392689,206393545,206401421,206405249,206406377,206415889,206419373,206421250,206430162,206436965,206437964,206439976,206446075,206450386,206453200,206454878 206203650,206206037,206303473,206343008,206384076,206392904,206393673,206401645,206405350,206406574,206415973,206419400,206421274,206430222,206437042,206438098,206440081,206446299,206450465,206453380,206456158 Gene ID= ENSG00000266028.7 TPM= 3.75 Transcript Type= NA chr1 206470438 206496889 206470438 206496889 + transcript7950.chr1.nnic@IKBKE transcript7950.chr1.nnic protein_coding 206470438,206471156,206473196,206474331,206474865,206476181,206476678,206477749,206478160,206478943,206479870,206480022,206480447,206484997,206485194,206487914,206490819,206491648,206493023,206493266,206493920,206496112 206470698,206471245,206473314,206474471,206474994,206476362,206476838,206477859,206478339,206479133,206479934,206480113,206480533,206485072,206485289,206487990,206490858,206491749,206493119,206493378,206493991,206496889 Gene ID= ENSG00000263528.7 TPM= 3.62 Transcript Type= NA chr1 206470495 206496889 206470495 206496889 + ENST00000581977.6@IKBKE ENST00000581977.6 protein_coding 206470495,206471156,206473196,206474331,206474865,206476181,206476678,206477749,206478160,206478943,206479870,206480022,206480447,206484997,206485194,206487914,206490819,206491648,206493023,206493266,206493920,206496112 206470698,206471245,206473314,206474471,206474994,206476362,206476838,206477859,206478339,206479133,206479934,206480113,206480533,206485072,206485306,206487990,206490858,206491749,206493119,206493378,206493991,206496889 Gene ID= ENSG00000263528.7 TPM= 9.96 Transcript Type= protein_coding chr1 206557165 206589267 206557165 206589267 + ENST00000577571.5@RASSF5 ENST00000577571.5 protein_coding 206557165,206583269,206584387,206585180,206586826 206557693,206583379,206584684,206585295,206589267 Gene ID= ENSG00000266094.7 TPM= 47.99 Transcript Type= protein_coding chr1 206591644 206612472 206591644 206612472 - transcript7965.chr1.nic@EIF2D transcript7965.chr1.nic protein_coding 206612287,206611184,206609376,206608280,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591644 206612472,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845 Gene ID= ENSG00000143486.15 TPM= 6.64 Transcript Type= NA chr1 206591642 206612459 206591642 206612459 - ENST00000271764.6@EIF2D ENST00000271764.6 protein_coding 206612287,206611184,206609376,206608236,206605400,206602951,206602336,206600263,206599733,206599463,206599003,206597100,206595718,206593619,206591642 206612459,206611374,206609459,206608326,206605507,206603204,206602453,206600308,206599836,206599612,206599092,206597195,206595838,206593793,206591845 Gene ID= ENSG00000143486.15 TPM= 80.89 Transcript Type= protein_coding chr1 206685639 206734282 206685639 206734282 + transcript7983.chr1.nnic@MAPKAPK2 transcript7983.chr1.nnic protein_coding 206685639,206728710,206729035,206729396,206729972,206730688,206731138,206731640,206731839,206732575 206685857,206728849,206729099,206729475,206730098,206730763,206731262,206731725,206731919,206734282 Gene ID= ENSG00000162889.10 TPM= 2.72 Transcript Type= NA chr1 206685037 206734283 206685037 206734283 + ENST00000367103.3@MAPKAPK2 ENST00000367103.3 protein_coding 206685037,206728710,206729035,206729396,206729972,206730688,206731138,206731640,206731839,206732575 206685508,206728849,206729099,206729475,206730098,206730763,206731262,206731725,206731919,206734283 Gene ID= ENSG00000162889.10 TPM= 7.24 Transcript Type= protein_coding chr1 207043849 207051077 207043849 207051077 - ENST00000315927.8@YOD1 ENST00000315927.8 protein_coding 207050688,207043849 207051077,207049723 Gene ID= ENSG00000180667.10 TPM= 4.53 Transcript Type= protein_coding chr1 207053040 207080959 207053040 207080959 + transcript7990.chr1.nnic@PFKFB2 transcript7990.chr1.nnic protein_coding 207053040,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207078954 207053207,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207080959 Gene ID= ENSG00000123836.14 TPM= 2.72 Transcript Type= NA chr1 207053260 207077823 207053260 207077823 + ENST00000367080.7@PFKFB2 ENST00000367080.7 protein_coding 207053260,207054701,207061953,207062620,207063143,207063347,207063773,207065036,207067499,207068163,207069424,207070280,207071188,207071509,207072204 207053366,207054802,207062078,207062716,207063209,207063421,207063829,207065160,207067706,207068309,207069528,207070409,207071250,207071573,207077823 Gene ID= ENSG00000123836.14 TPM= 1.81 Transcript Type= protein_coding chr1 207321508 207360966 207321508 207360966 + ENST00000367064.7@CD55 ENST00000367064.7 protein_coding 207321508,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207359546 207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207360966 Gene ID= ENSG00000196352.14 TPM= 648.37 Transcript Type= protein_coding chr1 207321532 207340766 207321532 207340766 + ENST00000367063.6@CD55 ENST00000367063.6 protein_coding 207321532,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391 207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340766 Gene ID= ENSG00000196352.14 TPM= 80.14 Transcript Type= protein_coding chr1 207321701 207360501 207321701 207360501 + ENST00000314754.12@CD55 ENST00000314754.12 protein_coding 207321701,207322382,207324559,207325622,207326752,207331108,207336693,207337329,207339397,207340391,207359546 207321865,207322567,207324750,207325721,207326837,207331296,207336818,207337409,207339417,207340508,207360501 Gene ID= ENSG00000196352.14 TPM= 35.77 Transcript Type= protein_coding chr1 207737635 207739608 207737635 207739608 + transcript8055.chr1.nnic@CR1L transcript8055.chr1.nnic protein_coding 207737635,207738404,207739151 207737741,207738571,207739608 Gene ID= ENSG00000197721.16 TPM= 2.72 Transcript Type= NA chr1 207752057 207795513 207752057 207795513 + ENST00000367042.5@CD46 ENST00000367042.5 protein_coding 207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207790253,207793519 207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207790345,207795513 Gene ID= ENSG00000117335.19 TPM= 157.43 Transcript Type= protein_coding chr1 207752057 207795513 207752057 207795513 + ENST00000354848.5@CD46 ENST00000354848.5 protein_coding 207752057,207757014,207757540,207759639,207761249,207767013,207767779,207770321,207783292,207785071,207785619,207793519 207752309,207757202,207757642,207759724,207761446,207767195,207767823,207770362,207783330,207785106,207785682,207795513 Gene ID= ENSG00000117335.19 TPM= 433.39 Transcript Type= protein_coding chr1 207752057 207795513 207752057 207795513 + ENST00000357714.5@CD46 ENST00000357714.5 protein_coding 207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207793519 207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207795513 Gene ID= ENSG00000117335.19 TPM= 140 Transcript Type= protein_coding chr1 207752057 207795513 207752057 207795513 + ENST00000367041.5@CD46 ENST00000367041.5 protein_coding 207752057,207757014,207757540,207759639,207761249,207767013,207770321,207783292,207785071,207785619,207790253,207793519 207752309,207757202,207757642,207759724,207761446,207767195,207770362,207783330,207785106,207785682,207790345,207795513 Gene ID= ENSG00000117335.19 TPM= 43.33 Transcript Type= protein_coding chr1 207752057 207795513 207752057 207795513 + ENST00000322875.8@CD46 ENST00000322875.8 protein_coding 207752057,207757014,207757540,207759639,207761249,207767013,207767607,207767779,207770321,207783292,207785071,207785619,207793519 207752309,207757202,207757642,207759724,207761446,207767195,207767651,207767823,207770362,207783330,207785106,207785682,207795513 Gene ID= ENSG00000117335.19 TPM= 1.45 Transcript Type= protein_coding chr1 207880972 207911402 207880972 207911402 - ENST00000310833.11@CD34 ENST00000310833.11 protein_coding 207911002,207899821,207898973,207897493,207889465,207889161,207888682,207880972 207911402,207900003,207899226,207897573,207889621,207889213,207888846,207887923 Gene ID= ENSG00000174059.16 TPM= 16.3 Transcript Type= protein_coding chr1 207886539 207911402 207886539 207911402 - ENST00000356522.4@CD34 ENST00000356522.4 protein_coding 207911002,207899821,207898973,207897493,207889465,207889161,207888682,207886539 207911402,207900003,207899226,207897573,207889621,207889213,207888846,207888118 Gene ID= ENSG00000174059.16 TPM= 8.15 Transcript Type= protein_coding chr1 209583729 209613938 209583729 209613938 + ENST00000361322.2@CAMK1G ENST00000361322.2 protein_coding 209583729,209594955,209599983,209603214,209605536,209606320,209607858,209608980,209609851,209611465,209611792,209612785,209613040 209583772,209595075,209600111,209603288,209605674,209606443,209607933,209609092,209609929,209611552,209612216,209612912,209613938 Gene ID= ENSG00000008118.9 TPM= 3.62 Transcript Type= protein_coding chr1 209614874 209651415 209614874 209651415 - transcript8062.chr1.nic@LAMB3 transcript8062.chr1.nic protein_coding 209651088,209650917,209649964,209638534,209637908,209634447,209633070,209632583,209630615,209629737,209628035,209627383,209626867,209625648,209623840,209623505,209622982,209622536,209618452,209617907,209617410,209616471,209614874 209651415,209650981,209650118,209638648,209637981,209634638,209633133,209632776,209630735,209629925,209628190,209627579,209626978,209626026,209624000,209623725,209623179,209622680,209618659,209618048,209617586,209616624,209615407 Gene ID= ENSG00000196878.14 TPM= 76.97 Transcript Type= NA chr1 209614875 209651334 209614875 209651334 - ENST00000391911.5@LAMB3 ENST00000391911.5 protein_coding 209650917,209649964,209638534,209637908,209634447,209633070,209632583,209630615,209629737,209628035,209627383,209626867,209625648,209623840,209623505,209622982,209622536,209618452,209617907,209617410,209616471,209614875 209651334,209650118,209638648,209637981,209634638,209633133,209632776,209630735,209629925,209628190,209627579,209626978,209626026,209624000,209623725,209623179,209622680,209618659,209618048,209617586,209616624,209615407 Gene ID= ENSG00000196878.14 TPM= 61.58 Transcript Type= protein_coding chr1 209661364 209675247 209661364 209675247 - ENST00000445272.5@AL031316.1 ENST00000445272.5 antisense_RNA 209675222,209662911,209661364 209675247,209663061,209661567 Gene ID= ENSG00000227591.5 TPM= 5.43 Transcript Type= antisense_RNA chr1 209675420 209676388 209675420 209676388 + ENST00000367029.4@G0S2 ENST00000367029.4 protein_coding 209675420,209675653 209675549,209676388 Gene ID= ENSG00000123689.5 TPM= 320.56 Transcript Type= protein_coding chr1 209686180 209734949 209686180 209734949 + ENST00000367028.6@HSD11B1 ENST00000367028.6 protein_coding 209686180,209704895,209705811,209706709,209706943,209732436,209734304 209686285,209705030,209705941,209706820,209707128,209732579,209734949 Gene ID= ENSG00000117594.9 TPM= 1.81 Transcript Type= protein_coding chr1 209785259 209806201 209785259 209806201 - transcript8070.chr1.nnic@IRF6 transcript8070.chr1.nnic protein_coding 209806109,209801972,209801240,209796348,209795290,209792269,209790495,209789667,209785259 209806201,209802043,209801416,209796552,209795418,209792427,209790887,209789785,209788644 Gene ID= ENSG00000117595.10 TPM= 12.68 Transcript Type= NA chr1 210328903 210676808 210328903 210676808 + transcript8078.chr1.nnic@HHAT transcript8078.chr1.nnic protein_coding 210328903,210348933,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210630997,210674288 210329104,210349066,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210631176,210676808 Gene ID= ENSG00000054392.12 TPM= 3.85 Transcript Type= NA chr1 210328262 210676296 210328262 210676296 + transcript8084.chr1.nnic@HHAT transcript8084.chr1.nnic protein_coding 210328262,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210674288 210328384,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210676296 Gene ID= ENSG00000054392.12 TPM= 2.49 Transcript Type= NA chr1 210328252 210676296 210328252 210676296 + ENST00000413764.6@HHAT ENST00000413764.6 protein_coding 210328252,210348933,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210674288 210328384,210349066,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210676296 Gene ID= ENSG00000054392.12 TPM= 19.02 Transcript Type= protein_coding chr1 210328953 210676296 210328953 210676296 + ENST00000261458.7@HHAT ENST00000261458.7 protein_coding 210328953,210348933,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210674288 210329104,210349066,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210676296 Gene ID= ENSG00000054392.12 TPM= 9.06 Transcript Type= protein_coding chr1 210328906 210676296 210328906 210676296 + ENST00000545154.5@HHAT ENST00000545154.5 protein_coding 210328906,210362852,210387468,210400468,210404464,210418154,210464505,210513153,210587898,210623526,210674288 210329104,210362919,210387581,210400662,210404679,210418325,210464655,210513188,210588099,210623670,210676296 Gene ID= ENSG00000054392.12 TPM= 3.62 Transcript Type= protein_coding chr1 211259837 211313313 211259837 211313313 + transcript8106.chr1.nic@RCOR3 transcript8106.chr1.nic protein_coding 211259837,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312720 211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211313313 Gene ID= ENSG00000117625.13 TPM= 1.81 Transcript Type= NA chr1 211259388 211313298 211259388 211313298 + ENST00000452621.6@RCOR3 ENST00000452621.6 protein_coding 211259388,211260108,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312720 211259726,211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211313298 Gene ID= ENSG00000117625.13 TPM= 8.15 Transcript Type= protein_coding chr1 211259975 211316385 211259975 211316385 + ENST00000367005.8@RCOR3 ENST00000367005.8 protein_coding 211259975,211271232,211274210,211276257,211278117,211279238,211289178,211295676,211304083,211312720,211313424 211260164,211271309,211274262,211276418,211278241,211279316,211289396,211295753,211304140,211312961,211316385 Gene ID= ENSG00000117625.13 TPM= 3.62 Transcript Type= protein_coding chr1 211326837 211374946 211326837 211374946 + ENST00000261464.9@TRAF5 ENST00000261464.9 protein_coding 211326837,211353239,211354410,211356367,211359912,211360702,211361088,211365376,211369452,211371302,211372128 211326889,211353457,211354467,211356468,211360076,211360779,211361162,211365468,211369592,211371470,211374946 Gene ID= ENSG00000082512.14 TPM= 2.72 Transcript Type= protein_coding chr1 211571568 211578742 211571568 211578742 - ENST00000367001.4@SLC30A1 ENST00000367001.4 protein_coding 211577991,211571568 211578742,211576289 Gene ID= ENSG00000170385.9 TPM= 6.34 Transcript Type= protein_coding chr1 211743458 211830779 211743458 211830779 - transcript8121.chr1.nnic@LPGAT1 transcript8121.chr1.nnic protein_coding 211830573,211830183,211829059,211793072,211787632,211783229,211778918,211750961,211749939,211747203,211745913,211743458 211830779,211830330,211829323,211793190,211787727,211783502,211779044,211751067,211750050,211747258,211745989,211743801 Gene ID= ENSG00000123684.12 TPM= 1.81 Transcript Type= NA chr1 211743458 211830338 211743458 211830338 - transcript8122.chr1.nnic@LPGAT1 transcript8122.chr1.nnic protein_coding 211830183,211829059,211793072,211787632,211783229,211778918,211750961,211749939,211747203,211745913,211743458 211830338,211829323,211793190,211787727,211783502,211779044,211751067,211750050,211747258,211745989,211743801 Gene ID= ENSG00000123684.12 TPM= 2.72 Transcript Type= NA chr1 211744983 211830779 211744983 211830779 - transcript8127.chr1.nnic@LPGAT1 transcript8127.chr1.nnic protein_coding 211830573,211830183,211829059,211793072,211787632,211783229,211778918,211750961,211744983 211830779,211830330,211829323,211793190,211787727,211783502,211779044,211751067,211750050 Gene ID= ENSG00000123684.12 TPM= 18.26 Transcript Type= NA chr1 211744983 211830496 211744983 211830496 - transcript8129.chr1.nnic@LPGAT1 transcript8129.chr1.nnic protein_coding 211830183,211829059,211793072,211787632,211783229,211778918,211750961,211744983 211830496,211829323,211793190,211787727,211783502,211779044,211751067,211750050 Gene ID= ENSG00000123684.12 TPM= 15.55 Transcript Type= NA chr1 211743457 211830772 211743457 211830772 - ENST00000366997.8@LPGAT1 ENST00000366997.8 protein_coding 211830573,211829059,211793072,211787632,211783229,211778918,211750961,211743457 211830772,211829323,211793190,211787727,211783502,211779044,211751067,211750050 Gene ID= ENSG00000123684.12 TPM= 4.23 Transcript Type= protein_coding chr1 211744983 211830345 211744983 211830345 - transcript8131.chr1.nnic@LPGAT1 transcript8131.chr1.nnic protein_coding 211830183,211829059,211793072,211783229,211778918,211750961,211744983 211830345,211829323,211793190,211783502,211779044,211751067,211750050 Gene ID= ENSG00000123684.12 TPM= 2.72 Transcript Type= NA chr1 211940401 212035542 211940401 212035542 - ENST00000366994.7@INTS7 ENST00000366994.7 protein_coding 212035344,212021083,212020122,212016886,212011375,212007250,212006639,211987886,211982676,211981093,211978272,211976582,211975166,211968513,211967878,211966430,211952569,211946607,211944784,211940401 212035542,212021212,212020268,212017023,212011421,212007449,212006761,211988003,211982810,211981190,211978511,211976719,211975372,211968707,211967981,211966498,211952701,211946705,211944969,211942111 Gene ID= ENSG00000143493.12 TPM= 9.96 Transcript Type= protein_coding chr1 212285408 212361862 212285408 212361862 + transcript8139.chr1.nnic@PPP2R5A transcript8139.chr1.nnic protein_coding 212285408,212306783,212329135,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638 212286291,212306900,212329331,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361862 Gene ID= ENSG00000066027.11 TPM= 1.81 Transcript Type= NA chr1 212285382 212361862 212285382 212361862 + transcript8144.chr1.nnic@PPP2R5A transcript8144.chr1.nnic protein_coding 212285382,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638 212286291,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361862 Gene ID= ENSG00000066027.11 TPM= 2.72 Transcript Type= NA chr1 212285537 212361863 212285537 212361863 + ENST00000261461.6@PPP2R5A ENST00000261461.6 protein_coding 212285537,212329135,212333497,212342188,212345803,212347347,212348389,212349189,212356626,212356950,212357157,212358686,212360638 212286291,212329331,212333598,212342280,212345933,212347406,212348497,212349242,212356676,212357069,212357284,212358787,212361863 Gene ID= ENSG00000066027.11 TPM= 9.96 Transcript Type= protein_coding chr1 212363931 212414895 212363931 212414895 - ENST00000261455.8@TMEM206 ENST00000261455.8 protein_coding 212414722,212410425,212386891,212385274,212379895,212377562,212375193,212363931 212414895,212410521,212387100,212385425,212380037,212377706,212375300,212365376 Gene ID= ENSG00000065600.12 TPM= 8.15 Transcript Type= protein_coding chr1 212364482 212414898 212364482 212414898 - transcript8147.chr1.nnic@TMEM206 transcript8147.chr1.nnic protein_coding 212414722,212410425,212386891,212385274,212379895,212375193,212364482 212414898,212410521,212387100,212385425,212380037,212375300,212365376 Gene ID= ENSG00000065600.12 TPM= 1.81 Transcript Type= NA chr1 212432973 212446372 212432973 212446372 + ENST00000473900.1@NENF ENST00000473900.1 protein_coding 212432973,212442546,212444339,212445830 212433120,212442625,212444442,212446372 Gene ID= ENSG00000117691.9 TPM= 1.81 Transcript Type= processed_transcript chr1 212432887 212446379 212432887 212446379 + ENST00000366988.4@NENF ENST00000366988.4 protein_coding 212432887,212442565,212444339,212445830 212433120,212442625,212444442,212446379 Gene ID= ENSG00000117691.9 TPM= 132.21 Transcript Type= protein_coding chr1 212608670 212620777 212608670 212620777 + ENST00000341491.8@ATF3 ENST00000341491.8 protein_coding 212608670,212615018,212618127,212619358 212608930,212615261,212618234,212620777 Gene ID= ENSG00000162772.16 TPM= 3.62 Transcript Type= protein_coding chr1 212686418 212699985 212686418 212699985 - ENST00000243440.1@BATF3 ENST00000243440.1 protein_coding 212699673,212696961,212686418 212699985,212697065,212686979 Gene ID= ENSG00000123685.8 TPM= 6.34 Transcript Type= protein_coding chr1 212737619 212791798 212737619 212791798 - transcript8167.chr1.nnic@NSL1 transcript8167.chr1.nnic protein_coding 212791530,212787559,212784363,212782372,212766189,212737619 212791798,212787637,212784493,212782426,212766273,212738686 Gene ID= ENSG00000117697.14 TPM= 2.72 Transcript Type= NA chr1 212736956 212791782 212736956 212791782 - ENST00000366977.7@NSL1 ENST00000366977.7 protein_coding 212791530,212787559,212784363,212782372,212739534,212736956 212791782,212787637,212784493,212782426,212739601,212738686 Gene ID= ENSG00000117697.14 TPM= 20.83 Transcript Type= protein_coding chr1 212791859 212816619 212791859 212816619 + transcript8159.chr1.nnic@TATDN3 transcript8159.chr1.nnic protein_coding 212791859,212795095,212796517,212797153,212802701,212804320,212804596,212807736,212812227,212815013 212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816619 Gene ID= ENSG00000203705.10 TPM= 1.81 Transcript Type= NA chr1 212791884 212816617 212791884 212816617 + ENST00000366973.8@TATDN3 ENST00000366973.8 protein_coding 212791884,212795095,212796517,212797112,212802701,212804320,212804596,212807736,212812251,212815013 212791987,212795127,212796590,212797196,212802763,212804429,212804651,212807848,212812328,212816617 Gene ID= ENSG00000203705.10 TPM= 18.11 Transcript Type= protein_coding chr1 212856604 212858088 212856604 212858088 - ENST00000426161.5@FLVCR1-AS1 ENST00000426161.5 lincRNA 212857766,212856604 212858088,212857172 Gene ID= ENSG00000198468.7 TPM= 4.53 Transcript Type= lincRNA chr1 212992183 213015511 212992183 213015511 - transcript8176.chr1.nic@ANGEL2 transcript8176.chr1.nic protein_coding 213015226,213013093,213008210,213007129,213005033,213000786,213000326,212997155,212992183 213015511,213013418,213008466,213007198,213005454,213000912,213000383,212997318,212995192 Gene ID= ENSG00000174606.13 TPM= 9.51 Transcript Type= NA chr1 212992183 213015511 212992183 213015511 - transcript8181.chr1.nnic@ANGEL2 transcript8181.chr1.nnic protein_coding 213015226,213013093,213008210,213007129,213005033,213000326,212997155,212992183 213015511,213013418,213008466,213007198,213005454,213000383,212997318,212995192 Gene ID= ENSG00000174606.13 TPM= 2.26 Transcript Type= NA chr1 213051238 213273464 213051238 213273464 + transcript8187.chr1.nnic@RPS6KC1 transcript8187.chr1.nnic protein_coding 213051238,213071006,213077696,213087962,213104454,213117317,213129527,213167858,213176400,213230497,213232123,213240702,213242569,213261558,213262721,213272524 213051509,213071041,213077816,213088030,213104569,213117410,213129889,213167973,213176492,213230544,213232255,213242297,213242658,213261640,213262816,213273464 Gene ID= ENSG00000136643.11 TPM= 3.62 Transcript Type= NA chr1 213051233 213273464 213051233 213273464 + ENST00000543354.5@RPS6KC1 ENST00000543354.5 protein_coding 213051233,213071006,213104454,213117317,213129527,213167858,213176400,213230497,213232123,213240702,213242569,213261558,213262721,213272524 213051509,213071041,213104569,213117410,213129889,213167973,213176492,213230544,213232255,213242297,213242658,213261640,213262816,213273464 Gene ID= ENSG00000136643.11 TPM= 3.62 Transcript Type= protein_coding chr1 213051233 213273464 213051233 213273464 + ENST00000615329.4@RPS6KC1 ENST00000615329.4 protein_coding 213051233,213071006,213077696,213104454,213117317,213129527,213167858,213176400,213240702,213242569,213261558,213262721,213272524 213051509,213071041,213077816,213104569,213117410,213129889,213167973,213176492,213242297,213242658,213261640,213262816,213273464 Gene ID= ENSG00000136643.11 TPM= 1.81 Transcript Type= protein_coding chr1 213989682 214037447 213989682 214037447 + transcript8207.chr1.nic@PROX1 transcript8207.chr1.nic protein_coding 213989682,213996469,214005165,214011521,214035649 213989781,213998260,214005272,214011715,214037447 Gene ID= ENSG00000117707.15 TPM= 3.62 Transcript Type= NA chr1 214281233 214337131 214281233 214337131 + ENST00000366957.9@SMYD2 ENST00000366957.9 protein_coding 214281233,214305187,214314762,214318079,214318859,214324641,214327622,214330168,214330950,214332018,214334200,214336704 214281427,214305250,214314872,214318139,214318983,214324708,214327724,214330278,214331070,214332192,214334308,214337131 Gene ID= ENSG00000143499.13 TPM= 14.49 Transcript Type= protein_coding chr1 215081649 215237092 215081649 215237092 + transcript8231.chr1.nnic@KCNK2 transcript8231.chr1.nnic protein_coding 215081649,215086368,215124633,215169199,215171997,215194953,215234828 215081861,215086678,215124750,215169359,215172183,215195092,215237092 Gene ID= ENSG00000082482.13 TPM= 4.53 Transcript Type= NA chr1 215005281 215237089 215005281 215237089 + transcript8239.chr1.nic@KCNK2 transcript8239.chr1.nic protein_coding 215005281,215086368,215169199,215171997,215194953,215234828 215005955,215086678,215169359,215172183,215195092,215237089 Gene ID= ENSG00000082482.13 TPM= 5.89 Transcript Type= NA chr1 215082688 215237089 215082688 215237089 + transcript8242.chr1.nic@KCNK2 transcript8242.chr1.nic protein_coding 215082688,215086368,215169199,215171997,215194953,215234828 215083431,215086678,215169359,215172183,215195092,215237089 Gene ID= ENSG00000082482.13 TPM= 4.75 Transcript Type= NA chr1 215083236 215237093 215083236 215237093 + ENST00000444842.6@KCNK2 ENST00000444842.6 protein_coding 215083236,215086368,215124633,215169199,215171997,215194953,215234828 215083431,215086678,215124750,215169359,215172183,215195092,215237093 Gene ID= ENSG00000082482.13 TPM= 19.02 Transcript Type= protein_coding chr1 215423613 215457808 215423613 215457808 . transcript8250.chr1.nnic@NA transcript8250.chr1.nnic NA 215423613,215423896,215435332,215456409,215456853 215423711,215423991,215435473,215456446,215457808 Gene ID= novel_gene_chr1_8251 TPM= 1.81 Transcript Type= NA chr1 215567022 215621829 215567022 215621829 + transcript8258.chr1.nnic@KCTD3 transcript8258.chr1.nnic protein_coding 215567022,215567311,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057 215567141,215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621829 Gene ID= ENSG00000136636.12 TPM= 82.02 Transcript Type= NA chr1 215567374 215621829 215567374 215621829 + transcript8260.chr1.nnic@KCTD3 transcript8260.chr1.nnic protein_coding 215567374,215567469,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057 215567419,215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621829 Gene ID= ENSG00000136636.12 TPM= 10.49 Transcript Type= NA chr1 215567123 215621829 215567123 215621829 + transcript8261.chr1.nnic@KCTD3 transcript8261.chr1.nnic protein_coding 215567123,215573786,215574073,215575901,215577670,215577929,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057 215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621829 Gene ID= ENSG00000136636.12 TPM= 8.38 Transcript Type= NA chr1 215567392 215621807 215567392 215621807 + ENST00000259154.8@KCTD3 ENST00000259154.8 protein_coding 215567392,215573786,215574073,215575901,215577670,215578001,215579000,215579909,215586495,215595356,215601867,215602085,215604132,215608017,215611825,215618886,215619153,215620057 215567768,215573839,215574118,215575974,215577728,215578081,215579137,215579999,215586685,215595471,215601954,215602201,215604302,215608172,215611921,215619070,215619291,215621807 Gene ID= ENSG00000136636.12 TPM= 171.67 Transcript Type= protein_coding chr1 216503246 216723472 216503246 216723472 - ENST00000391890.7@ESRRG ENST00000391890.7 protein_coding 216723240,216715074,216714516,216677076,216650973,216567988,216564219,216519152,216503246 216723472,216715249,216714634,216677491,216651089,216568098,216564380,216519421,216507183 Gene ID= ENSG00000196482.16 TPM= 1.81 Transcript Type= protein_coding chr1 216503254 216723453 216503254 216723453 - ENST00000408911.7@ESRRG ENST00000408911.7 protein_coding 216723244,216677076,216650973,216567988,216564219,216519152,216503254 216723453,216677491,216651089,216568098,216564380,216519421,216507183 Gene ID= ENSG00000196482.16 TPM= 5.43 Transcript Type= protein_coding chr1 217608184 217631082 217608184 217631082 - ENST00000366934.3@GPATCH2 ENST00000366934.3 protein_coding 217630916,217619783,217614141,217610889,217610321,217608184 217631082,217620499,217614202,217611071,217610400,217610192 Gene ID= ENSG00000092978.10 TPM= 2.72 Transcript Type= protein_coding chr1 218285287 218337983 218285287 218337983 + ENST00000366932.3@RRP15 ENST00000366932.3 protein_coding 218285287,218302294,218305028,218307431,218330948 218285455,218302559,218305125,218307632,218337983 Gene ID= ENSG00000067533.5 TPM= 6.34 Transcript Type= protein_coding chr1 219173844 219212865 219173844 219212865 + ENST00000366928.9@LYPLAL1 ENST00000366928.9 protein_coding 219173844,219179147,219193082,219210532,219211492 219173981,219179246,219193251,219210647,219212865 Gene ID= ENSG00000143353.11 TPM= 36.45 Transcript Type= protein_coding chr1 219173869 219212865 219173869 219212865 + ENST00000460522.5@LYPLAL1 ENST00000460522.5 protein_coding 219173869,219179147,219210532,219211492 219173981,219179246,219210647,219212865 Gene ID= ENSG00000143353.11 TPM= 4.75 Transcript Type= processed_transcript chr1 219173875 219212865 219173875 219212865 + ENST00000366927.3@LYPLAL1 ENST00000366927.3 protein_coding 219173875,219179147,219193130,219210532,219211492 219173981,219179246,219193251,219210647,219212865 Gene ID= ENSG00000143353.11 TPM= 8.38 Transcript Type= protein_coding chr1 219173895 219212865 219173895 219212865 + ENST00000463964.5@LYPLAL1 ENST00000463964.5 protein_coding 219173895,219179147,219179400,219193082,219210532,219211492 219173981,219179246,219179426,219193251,219210647,219212865 Gene ID= ENSG00000143353.11 TPM= 1.13 Transcript Type= processed_transcript chr1 219968601 220046658 219968601 220046658 - ENST00000366923.7@EPRS ENST00000366923.7 protein_coding 220046343,220040185,220034914,220033502,220032387,220030386,220025132,220024264,220022347,220019988,220018995,220018449,220010946,220007202,220006106,220005248,220001138,219996983,219988590,219987142,219984206,219983189,219982772,219981378,219980756,219980085,219979418,219978546,219973238,219972069,219969058,219968601 220046658,220040269,220035013,220033658,220032526,220030480,220025258,220024456,220022518,220020221,220019079,220018508,220011056,220007338,220006313,220005360,220001255,219997342,219988823,219987404,219984257,219983398,219982844,219981457,219980857,219980240,219979615,219978719,219973398,219972147,219969122,219968956 Gene ID= ENSG00000136628.17 TPM= 29.88 Transcript Type= protein_coding chr1 220057484 220089803 220057484 220089803 - transcript8291.chr1.nic@BPNT1 transcript8291.chr1.nic protein_coding 220089644,220079727,220073967,220072850,220069384,220067302,220062757,220059686,220057484 220089803,220079854,220074071,220072957,220069432,220067393,220062954,220059791,220058992 Gene ID= ENSG00000162813.17 TPM= 4.53 Transcript Type= NA chr1 220094102 220148041 220094102 220148041 + ENST00000366922.2@IARS2 ENST00000366922.2 protein_coding 220094102,220096104,220100490,220102129,220102363,220102495,220102687,220103447,220105891,220107061,220110786,220114314,220125237,220126750,220134402,220136809,220137918,220139008,220140183,220141803,220142944,220145509,220147493 220094483,220096226,220100649,220102277,220102412,220102604,220102777,220103562,220106060,220107151,220110937,220114474,220125339,220126843,220134510,220136911,220138043,220139139,220140289,220141948,220143134,220145653,220148041 Gene ID= ENSG00000067704.9 TPM= 268.95 Transcript Type= protein_coding chr1 220148293 220272454 220148293 220272454 - ENST00000358951.6@RAB3GAP2 ENST00000358951.6 protein_coding 220272223,220232799,220213856,220212887,220210955,220210801,220210388,220205907,220202276,220196250,220195298,220195078,220193240,220191068,220190377,220190064,220189703,220185651,220184036,220182718,220182257,220172637,220171889,220170892,220167502,220167293,220164733,220162198,220159386,220157802,220157270,220153968,220153185,220151606,220148293 220272454,220232863,220213979,220212968,220211002,220210876,220210489,220206006,220202374,220196398,220195377,220195167,220193379,220191284,220190520,220190146,220189767,220185741,220184163,220182931,220182354,220172742,220172049,220171120,220167675,220167399,220164799,220162268,220159421,220157876,220157488,220154057,220153406,220151764,220151406 Gene ID= ENSG00000118873.15 TPM= 10.87 Transcript Type= protein_coding chr1 220528168 220582899 220528168 220582899 + transcript8316.chr1.nic@MARK1 transcript8316.chr1.nic protein_coding 220528168,220579354,220581065 220528873,220579557,220582899 Gene ID= ENSG00000116141.15 TPM= 1.81 Transcript Type= NA chr1 220689845 220699157 220689845 220699157 + ENST00000294889.5@C1orf115 ENST00000294889.5 protein_coding 220689845,220696612 220690711,220699157 Gene ID= ENSG00000162817.6 TPM= 25.36 Transcript Type= protein_coding chr1 220748334 220784815 220748334 220784815 + ENST00000366913.7@MARC2 ENST00000366913.7 protein_coding 220748334,220754947,220761658,220762910,220780018,220780168,220781778,220783919 220748803,220755120,220761820,220763050,220780079,220780239,220781932,220784815 Gene ID= ENSG00000117791.15 TPM= 17.21 Transcript Type= protein_coding chr1 220879400 220885059 220879400 220885059 + ENST00000366903.7@HLX ENST00000366903.7 protein_coding 220879400,220881194,220882164,220884195 220880449,220881373,220882348,220885059 Gene ID= ENSG00000136630.12 TPM= 15.39 Transcript Type= protein_coding chr1 222644303 222665823 222644303 222665823 + ENST00000340535.11@MIA3 ENST00000340535.11 protein_coding 222644303,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222663998,222665309 222644586,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222664148,222665823 Gene ID= ENSG00000154305.16 TPM= 1.81 Transcript Type= protein_coding chr1 222618086 222668012 222618086 222668012 + ENST00000344922.9@MIA3 ENST00000344922.9 protein_coding 222618086,222621159,222624768,222627575,222632165,222633104,222645554,222648829,222650292,222650634,222650793,222651977,222652228,222653008,222653228,222654243,222654389,222654655,222658722,222659453,222659622,222659734,222659906,222660177,222662056,222662253,222663998,222665309 222618243,222621292,222624854,222630389,222632326,222633249,222645685,222648850,222650380,222650711,222650903,222652048,222652332,222653130,222653339,222654298,222654479,222654793,222658823,222659513,222659657,222659801,222660006,222660314,222662124,222662332,222664148,222668012 Gene ID= ENSG00000154305.16 TPM= 11.77 Transcript Type= protein_coding chr1 222668013 222712524 222668013 222712524 - ENST00000340020.10@AIDA ENST00000340020.10 protein_coding 222712208,222703148,222694210,222693789,222687595,222686930,222676096,222673313,222670133,222668013 222712524,222703217,222694263,222693843,222687658,222687036,222676218,222673435,222670250,222669989 Gene ID= ENSG00000186063.12 TPM= 57.05 Transcript Type= protein_coding chr1 222712553 222735196 222712553 222735196 + ENST00000340934.9@BROX ENST00000340934.9 protein_coding 222712553,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628 222712942,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735196 Gene ID= ENSG00000162819.11 TPM= 33.96 Transcript Type= protein_coding chr1 222713324 222735185 222713324 222735185 + transcript8345.chr1.nic@BROX transcript8345.chr1.nic protein_coding 222713324,222715684,222718925,222719263,222722419,222724092,222725450,222727168,222728743,222729620,222730027,222731357,222732628 222713416,222715800,222719031,222719359,222722514,222724164,222725555,222727257,222728828,222729701,222730177,222731516,222735185 Gene ID= ENSG00000162819.11 TPM= 36.67 Transcript Type= NA chr1 222815022 222837384 222815022 222837384 + ENST00000450784.5@AL392172.1 ENST00000450784.5 lincRNA 222815022,222835119,222836996 222815078,222835215,222837384 Gene ID= ENSG00000228106.5 TPM= 1.81 Transcript Type= lincRNA chr1 222928424 223005995 222928424 223005995 + ENST00000284476.7@DISP1 ENST00000284476.7 protein_coding 222928424,222942807,222983080,222990625,222991520,222992013,222994885,223002385 222928570,222943332,222983109,222990748,222991647,222992110,222994982,223005995 Gene ID= ENSG00000154309.8 TPM= 13.58 Transcript Type= protein_coding chr1 223110242 223143248 223110242 223143248 - transcript8362.chr1.nnic@TLR5 transcript8362.chr1.nnic protein_coding 223143196,223141648,223137178,223134682,223134389,223132475,223110242 223143248,223141763,223137263,223134864,223134482,223132639,223113035 Gene ID= ENSG00000187554.11 TPM= 4.53 Transcript Type= NA chr1 223220827 223364277 223220827 223364277 - transcript8370.chr1.nnic@SUSD4 transcript8370.chr1.nnic protein_coding 223364057,223363278,223296727,223292439,223268502,223264630,223229197,223227594,223223249,223220827 223364277,223363460,223296890,223292651,223268675,223264818,223229394,223227738,223223631,223222220 Gene ID= ENSG00000143502.14 TPM= 2.42 Transcript Type= NA chr1 223220827 223364333 223220827 223364333 - transcript8372.chr1.nic@SUSD4 transcript8372.chr1.nic protein_coding 223364057,223363278,223292439,223268502,223264630,223229197,223227594,223223249,223220827 223364333,223363460,223292651,223268675,223264818,223229394,223227738,223223631,223222220 Gene ID= ENSG00000143502.14 TPM= 3.32 Transcript Type= NA chr1 223220821 223364202 223220821 223364202 - ENST00000366878.8@SUSD4 ENST00000366878.8 protein_coding 223364057,223363278,223292439,223268502,223264630,223229197,223227594,223223249,223220821 223364202,223363460,223292651,223268675,223264818,223229388,223227738,223223631,223222220 Gene ID= ENSG00000143502.14 TPM= 6.04 Transcript Type= protein_coding chr1 223234915 223364167 223234915 223364167 - ENST00000344029.6@SUSD4 ENST00000344029.6 protein_coding 223364057,223363278,223292439,223268502,223264630,223234915 223364167,223363460,223292651,223268675,223264818,223235100 Gene ID= ENSG00000143502.14 TPM= 2.72 Transcript Type= protein_coding chr1 223712332 223776018 223712332 223776018 + ENST00000295006.5@CAPN2 ENST00000295006.5 protein_coding 223712332,223717762,223744100,223745306,223746997,223749039,223750890,223751997,223752796,223755480,223757369,223759270,223761581,223762186,223764150,223766367,223769841,223770447,223771809,223772181,223774834 223712877,223717831,223744218,223745439,223747165,223749122,223750975,223752071,223752956,223755649,223757380,223759481,223761617,223762251,223764207,223766431,223769909,223770525,223771925,223772239,223776018 Gene ID= ENSG00000162909.17 TPM= 550.42 Transcript Type= protein_coding chr1 223712508 223776016 223712508 223776016 + transcript8390.chr1.nic@CAPN2 transcript8390.chr1.nic protein_coding 223712508,223717762,223744100,223745306,223746997,223749039,223750890,223751997,223752796,223755480,223757369,223759270,223761581,223762186,223764150,223766367,223769841,223771809,223772181,223774834 223712877,223717831,223744218,223745439,223747165,223749122,223750975,223752071,223752956,223755649,223757380,223759481,223761617,223762251,223764207,223766431,223770525,223771925,223772239,223776016 Gene ID= ENSG00000162909.17 TPM= 31.77 Transcript Type= NA chr1 223779894 223845597 223779894 223845597 - transcript8405.chr1.nnic@TP53BP2 transcript8405.chr1.nnic protein_coding 223845236,223821220,223814240,223810431,223806846,223804174,223803271,223802731,223802116,223800700,223799899,223798215,223795815,223793303,223792389,223789008,223784115,223779894 223845597,223821367,223814353,223810513,223806947,223804348,223803452,223802895,223802344,223800810,223800047,223798677,223796590,223793440,223792522,223789174,223784314,223780894 Gene ID= ENSG00000143514.16 TPM= 3.62 Transcript Type= NA chr1 223779899 223845972 223779899 223845972 - ENST00000343537.11@TP53BP2 ENST00000343537.11 protein_coding 223845654,223821220,223814240,223810431,223806846,223804174,223803271,223802731,223802116,223800700,223799899,223798215,223795815,223793303,223792389,223789008,223784115,223779899 223845972,223821367,223814353,223810513,223806947,223804348,223803452,223802895,223802344,223800810,223800047,223798677,223796590,223793440,223792522,223789174,223784314,223780894 Gene ID= ENSG00000143514.16 TPM= 28.98 Transcript Type= protein_coding chr1 223992766 224010605 223992766 224010605 + transcript8413.chr1.nic@AC138393.1 transcript8413.chr1.nic transcribed_unprocessed_pseudogene 223992766,224003520,224009320 223993047,224003654,224010605 Gene ID= ENSG00000185495.10 TPM= 2.72 Transcript Type= NA chr1 224114087 224162047 224114087 224162047 + ENST00000366862.9@FBXO28 ENST00000366862.9 protein_coding 224114087,224130472,224134074,224153142,224157352 224114396,224130581,224134212,224153337,224162047 Gene ID= ENSG00000143756.11 TPM= 24.45 Transcript Type= protein_coding chr1 224183239 224193437 224183239 224193437 + transcript8417.chr1.nic@DEGS1 transcript8417.chr1.nic protein_coding 224183239,224189577,224191092,224192332 224183418,224190319,224191156,224193437 Gene ID= ENSG00000143753.12 TPM= 8.3 Transcript Type= NA chr1 224183171 224193441 224183171 224193441 + ENST00000323699.8@DEGS1 ENST00000323699.8 protein_coding 224183171,224189577,224192332 224183418,224190319,224193441 Gene ID= ENSG00000143753.12 TPM= 65.35 Transcript Type= protein_coding chr1 224183182 224201986 224183182 224201986 + transcript8419.chr1.nnic@DEGS1 transcript8419.chr1.nnic protein_coding 224183182,224189577,224200959 224183418,224190319,224201986 Gene ID= ENSG00000143753.12 TPM= 3.32 Transcript Type= NA chr1 224227337 224330189 224227337 224330189 - ENST00000482491.5@NVL ENST00000482491.5 protein_coding 224330071,224326391,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224301691,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227337 224330189,224326464,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224301771,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670 Gene ID= ENSG00000143748.17 TPM= 3.62 Transcript Type= protein_coding chr1 224227334 224330387 224227334 224330387 - ENST00000281701.10@NVL ENST00000281701.10 protein_coding 224330071,224326391,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227334 224330387,224326464,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670 Gene ID= ENSG00000143748.17 TPM= 10.87 Transcript Type= protein_coding chr1 224227334 224330170 224227334 224330170 - ENST00000391875.6@NVL ENST00000391875.6 protein_coding 224330071,224317878,224317694,224311800,224307991,224305034,224304736,224303723,224300562,224296501,224294267,224289484,224287775,224286026,224281123,224275339,224268034,224250212,224236506,224233201,224231226,224227334 224330170,224317930,224317793,224311857,224308263,224305166,224304812,224303857,224300663,224296618,224294411,224289733,224287993,224286130,224281185,224275458,224268133,224250318,224236582,224233289,224231296,224227670 Gene ID= ENSG00000143748.17 TPM= 2.72 Transcript Type= protein_coding chr1 224356850 224379452 224356850 224379452 + ENST00000465271.5@CNIH4 ENST00000465271.5 protein_coding 224356850,224360495,224365879,224371283,224375795 224356993,224360563,224365991,224371423,224379452 Gene ID= ENSG00000143771.11 TPM= 90.55 Transcript Type= protein_coding chr1 224356893 224379452 224356893 224379452 + ENST00000366856.3@CNIH4 ENST00000366856.3 protein_coding 224356893,224360495,224365879,224371283,224379069 224356993,224360563,224365991,224371423,224379452 Gene ID= ENSG00000143771.11 TPM= 2.72 Transcript Type= protein_coding chr1 224387841 224434411 224387841 224434411 - transcript8438.chr1.nic@WDR26 transcript8438.chr1.nic protein_coding 224433684,224431682,224431525,224424518,224419518,224418260,224411427,224404430,224400950,224398889,224398515,224398097,224393828,224387841 224434411,224431781,224431581,224424654,224419615,224418416,224411565,224404570,224401069,224399034,224398593,224398226,224394013,224389860 Gene ID= ENSG00000162923.14 TPM= 7.24 Transcript Type= NA chr1 225401502 225428114 225401502 225428114 - transcript8447.chr1.nnic@LBR transcript8447.chr1.nnic protein_coding 225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225406664,225404626,225404404,225401502 225428114,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225406832,225404706,225404526,225403463 Gene ID= ENSG00000143815.14 TPM= 1.81 Transcript Type= NA chr1 225401502 225428035 225401502 225428035 - ENST00000272163.8@LBR ENST00000272163.8 protein_coding 225427954,225423911,225422077,225419715,225419263,225417984,225415278,225412454,225411337,225410291,225406664,225404626,225404404,225401502 225428035,225424089,225422277,225419798,225419452,225418180,225415332,225412645,225411440,225410416,225406832,225404706,225404526,225403463 Gene ID= ENSG00000143815.14 TPM= 31.69 Transcript Type= protein_coding chr1 225518259 225653143 225518259 225653143 - transcript8450.chr1.nic@ENAH transcript8450.chr1.nic protein_coding 225652686,225567249,225554906,225530554,225518259 225653143,225567414,225555083,225530638,225519565 Gene ID= ENSG00000154380.17 TPM= 3.62 Transcript Type= NA chr1 225777829 225790466 225777829 225790466 + ENST00000304786.11@SRP9 ENST00000304786.11 protein_coding 225777829,225783300,225789240 225778012,225783368,225790466 Gene ID= ENSG00000143742.12 TPM= 338.22 Transcript Type= protein_coding chr1 225777837 225790466 225777837 225790466 + ENST00000366839.8@SRP9 ENST00000366839.8 protein_coding 225777837,225783300,225786862,225789240 225778012,225783368,225786985,225790466 Gene ID= ENSG00000143742.12 TPM= 58.41 Transcript Type= protein_coding chr1 225810095 225845559 225810095 225845559 + ENST00000272167.9@EPHX1 ENST00000272167.9 protein_coding 225810095,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146 225810169,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845559 Gene ID= ENSG00000143819.12 TPM= 1167.91 Transcript Type= protein_coding chr1 225810412 225845559 225810412 225845559 + ENST00000614058.4@EPHX1 ENST00000614058.4 protein_coding 225810412,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146 225810615,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845559 Gene ID= ENSG00000143819.12 TPM= 12.89 Transcript Type= protein_coding chr1 225825354 225845563 225825354 225845563 + ENST00000366837.5@EPHX1 ENST00000366837.5 protein_coding 225825354,225828725,225831779,225838654,225839217,225839829,225842366,225844498,225845146 225825544,225828912,225831959,225838881,225839346,225840037,225842474,225844623,225845563 Gene ID= ENSG00000143819.12 TPM= 44.58 Transcript Type= protein_coding chr1 225840884 225882343 225840884 225882343 - transcript8458.chr1.nnic@TMEM63A transcript8458.chr1.nnic protein_coding 225882304,225879220,225877395,225874288,225871987,225871076,225867888,225865897,225862771,225862455,225862218,225860860,225859196,225856911,225856652,225855878,225853629,225852664,225849912,225848897,225848492,225847034,225846838,225842707,225840884 225882343,225879410,225877594,225874367,225872053,225871113,225868030,225867163,225862851,225862578,225862351,225860997,225859349,225857017,225856738,225855940,225853791,225852769,225850079,225849012,225848554,225847213,225846932,225842843,225841187 Gene ID= ENSG00000196187.11 TPM= 1.81 Transcript Type= NA chr1 225845536 225882369 225845536 225882369 - ENST00000366835.7@TMEM63A ENST00000366835.7 protein_coding 225882304,225879220,225877395,225874288,225871987,225871076,225867888,225867112,225866574,225865897,225862771,225862455,225862218,225860860,225859196,225856911,225856652,225855878,225853629,225852664,225849912,225848897,225848492,225847034,225845536 225882369,225879410,225877594,225874367,225872053,225871113,225868030,225867163,225866682,225865967,225862851,225862578,225862351,225860997,225859349,225857017,225856738,225855940,225853791,225852769,225850079,225849012,225848554,225847213,225846932 Gene ID= ENSG00000196187.11 TPM= 62.48 Transcript Type= protein_coding chr1 225919878 225924259 225919878 225924259 - ENST00000343818.10@PYCR2 ENST00000343818.10 protein_coding 225924044,225923701,225922204,225921858,225921552,225921208,225919878 225924259,225923771,225922383,225922079,225921644,225921371,225920620 Gene ID= ENSG00000143811.18 TPM= 174.77 Transcript Type= protein_coding chr1 225982702 225999331 225982702 225999331 - ENST00000272091.7@SDE2 ENST00000272091.7 protein_coding 225999193,225995266,225992891,225992398,225991243,225987896,225982702 225999331,225995383,225993002,225992567,225991363,225988388,225985523 Gene ID= ENSG00000143751.9 TPM= 19.92 Transcript Type= protein_coding chr1 226062678 226071999 226062678 226071999 + ENST00000366815.7@H3F3A ENST00000366815.7 protein_coding 226062678,226064329,226065656,226071351 226062811,226064479,226065809,226071999 Gene ID= ENSG00000163041.9 TPM= 513.9 Transcript Type= protein_coding chr1 226144679 226186730 226144679 226186730 - ENST00000366812.5@ACBD3 ENST00000366812.5 protein_coding 226186390,226165859,226164789,226161531,226159184,226154647,226152335,226144679 226186730,226166000,226164929,226161689,226159358,226154833,226152619,226146821 Gene ID= ENSG00000182827.8 TPM= 42.56 Transcript Type= protein_coding chr1 226231157 226309733 226231157 226309733 - ENST00000328205.9@LIN9 ENST00000328205.9 protein_coding 226309109,226301173,226297719,226295842,226287664,226286333,226277775,226267957,226266213,226265533,226250839,226238971,226233344,226233096,226231157 226309733,226301205,226297813,226295946,226287797,226286458,226277932,226268090,226266332,226265634,226250919,226239096,226233523,226233193,226232606 Gene ID= ENSG00000183814.15 TPM= 4.53 Transcript Type= protein_coding chr1 226360691 226408073 226360691 226408073 - ENST00000366794.9@PARP1 ENST00000366794.9 protein_coding 226407810,226402214,226392199,226390410,226388656,226386326,226385504,226383036,226381068,226379922,226379573,226379142,226377108,226374226,226370434,226368199,226367480,226365954,226365002,226363943,226363099,226361969,226360691 226408073,226402379,226392314,226390624,226388755,226386442,226385680,226383183,226381208,226380164,226379641,226379274,226377303,226374354,226370517,226368321,226367608,226366052,226365154,226364070,226363160,226362083,226361541 Gene ID= ENSG00000143799.12 TPM= 195.6 Transcript Type= protein_coding chr1 226631691 226739331 226631691 226739331 - transcript8512.chr1.nnic@ITPKB transcript8512.chr1.nnic protein_coding 226739041,226735527,226648672,226647167,226641921,226639557,226637679,226631691 226739331,226737665,226648771,226647380,226642125,226639658,226637750,226634886 Gene ID= ENSG00000143772.9 TPM= 6.34 Transcript Type= NA chr1 226870640 226896094 226870640 226896094 + transcript8515.chr1.nnic@PSEN2 transcript8515.chr1.nnic protein_coding 226870640,226875365,226881888,226883705,226885538,226888091,226888829,226889758,226890035,226890656,226891278,226891746,226894007,226895424 226871404,226875550,226882048,226883919,226885679,226888158,226889049,226889926,226890133,226890965,226891361,226891844,226894125,226896094 Gene ID= ENSG00000143801.16 TPM= 1.81 Transcript Type= NA chr1 226870640 226896101 226870640 226896101 + transcript8522.chr1.nic@PSEN2 transcript8522.chr1.nic protein_coding 226870640,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424 226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896101 Gene ID= ENSG00000143801.16 TPM= 20.37 Transcript Type= NA chr1 226870563 226896102 226870563 226896102 + ENST00000366783.7@PSEN2 ENST00000366783.7 protein_coding 226870563,226871262,226875365,226881888,226883705,226885538,226888091,226888829,226890035,226891278,226891743,226894007,226895424 226870649,226871404,226875550,226882048,226883919,226885679,226888158,226889049,226890133,226891361,226891844,226894125,226896102 Gene ID= ENSG00000143801.16 TPM= 46.64 Transcript Type= protein_coding chr1 226943283 226987597 226943283 226987597 + transcript8551.chr1.nnic@COQ8A transcript8551.chr1.nnic protein_coding 226943283,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453 226943403,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987597 Gene ID= ENSG00000163050.16 TPM= 104.93 Transcript Type= NA chr1 226940288 226987544 226940288 226987544 + ENST00000366777.3@COQ8A ENST00000366777.3 protein_coding 226940288,226961377,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453 226940399,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987544 Gene ID= ENSG00000163050.16 TPM= 2216.1 Transcript Type= protein_coding chr1 226940286 226987544 226940286 226987544 + ENST00000366778.5@COQ8A ENST00000366778.5 protein_coding 226940286,226961508,226965000,226965671,226977449,226982027,226982678,226982894,226983552,226983761,226984094,226984548,226984876,226985254,226986453 226940399,226961562,226965410,226965737,226977523,226982149,226982763,226983034,226983633,226983854,226984235,226984655,226984941,226985340,226987544 Gene ID= ENSG00000163050.16 TPM= 19.43 Transcript Type= protein_coding chr1 226992038 227318733 226992038 227318733 - transcript8572.chr1.nnic@CDC42BPA transcript8572.chr1.nnic protein_coding 227317005,227254064,227213136,227199557,227193786,227160543,227147359,227145489,227142945,227139576,227129109,227119804,227112671,227112312,227100992,227091886,227080893,227074259,227073864,227072204,227069777,227047927,227040131,227035471,227034655,227033334,227031298,227030408,227028657,227026055,227023263,227016927,227016080,227004994,226994823,226992038 227318733,227254155,227213219,227199652,227193936,227160636,227147559,227145737,227143024,227139745,227129231,227119937,227112913,227112422,227101239,227091991,227081017,227074364,227074012,227072299,227069853,227048010,227040238,227035607,227034794,227033415,227031514,227030474,227029250,227026152,227023347,227017052,227016199,227005111,226994980,226994401 Gene ID= ENSG00000143776.18 TPM= 16.3 Transcript Type= NA chr1 227137629 227318465 227137629 227318465 - transcript8580.chr1.nnic@CDC42BPA transcript8580.chr1.nnic protein_coding 227317005,227254064,227213136,227199557,227193786,227160543,227147359,227145489,227142945,227139576,227137629 227318465,227254155,227213219,227199652,227193936,227160636,227147559,227145737,227143024,227139745,227138004 Gene ID= ENSG00000143776.18 TPM= 4.53 Transcript Type= NA chr1 227728581 227783021 227728581 227783021 + transcript8585.chr1.nic@SNAP47 transcript8585.chr1.nic protein_coding 227728581,227731585,227732389,227747692,227758995,227766959,227780527 227728786,227731747,227735499,227748233,227759485,227767083,227783021 Gene ID= ENSG00000143740.14 TPM= 128.59 Transcript Type= NA chr1 227735675 227783021 227735675 227783021 + transcript8598.chr1.nnic@SNAP47 transcript8598.chr1.nnic protein_coding 227735675,227747692,227758995,227766959,227780527 227735730,227748233,227759485,227767083,227783021 Gene ID= ENSG00000143740.14 TPM= 19.92 Transcript Type= NA chr1 227728549 227734352 227728549 227734352 + ENST00000480265.1@SNAP47 ENST00000480265.1 protein_coding 227728549,227732389 227728786,227734352 Gene ID= ENSG00000143740.14 TPM= 22.64 Transcript Type= processed_transcript chr1 227731226 227735582 227731226 227735582 - transcript8593.chr1.nic@JMJD4 transcript8593.chr1.nic protein_coding 227734651,227733907,227733414,227732881,227731226 227735582,227734032,227733681,227733027,227732676 Gene ID= ENSG00000081692.12 TPM= 9.51 Transcript Type= NA chr1 227731234 227735348 227731234 227735348 - transcript8594.chr1.nic@JMJD4 transcript8594.chr1.nic protein_coding 227735012,227734651,227733907,227732881,227731234 227735348,227734816,227734032,227733681,227732676 Gene ID= ENSG00000081692.12 TPM= 9.51 Transcript Type= NA chr1 228082660 228099211 228082660 228099211 + ENST00000540651.5@ARF1 ENST00000540651.5 protein_coding 228082660,228097078,228097342,228097591,228097852 228082850,228097262,228097452,228097715,228099211 Gene ID= ENSG00000143761.15 TPM= 22.87 Transcript Type= protein_coding chr1 228082660 228099212 228082660 228099212 + ENST00000272102.9@ARF1 ENST00000272102.9 protein_coding 228082660,228097078,228097342,228097591,228097852 228082765,228097262,228097452,228097715,228099212 Gene ID= ENSG00000143761.15 TPM= 863.21 Transcript Type= protein_coding chr1 228083150 228099211 228083150 228099211 + ENST00000541182.1@ARF1 ENST00000541182.1 protein_coding 228083150,228097078,228097342,228097591,228097852 228083374,228097262,228097452,228097715,228099211 Gene ID= ENSG00000143761.15 TPM= 10.19 Transcript Type= protein_coding chr1 228100722 228102907 228100722 228102907 - transcript8618.chr1.nnic@C1orf35 transcript8618.chr1.nnic protein_coding 228102876,228102643,228102478,228102310,228102080,228101339,228100722 228102907,228102688,228102560,228102382,228102165,228101473,228101254 Gene ID= ENSG00000143793.12 TPM= 2.42 Transcript Type= NA chr1 228100722 228103355 228100722 228103355 - transcript8622.chr1.nic@C1orf35 transcript8622.chr1.nic protein_coding 228103134,228102899,228102643,228102080,228101339,228100722 228103355,228103049,228102688,228102560,228101473,228101254 Gene ID= ENSG00000143793.12 TPM= 3.62 Transcript Type= NA chr1 228100731 228103462 228100731 228103462 - ENST00000272139.4@C1orf35 ENST00000272139.4 protein_coding 228103134,228102899,228102643,228102478,228102310,228102080,228101339,228100731 228103462,228103049,228102688,228102560,228102382,228102165,228101473,228101254 Gene ID= ENSG00000143793.12 TPM= 51.32 Transcript Type= protein_coding chr1 228100731 228103320 228100731 228103320 - ENST00000485896.5@C1orf35 ENST00000485896.5 protein_coding 228103134,228102899,228102643,228102478,228102080,228101339,228100731 228103320,228103049,228102688,228102560,228102382,228101473,228101254 Gene ID= ENSG00000143793.12 TPM= 4.23 Transcript Type= processed_transcript chr1 228106681 228109305 228106681 228109305 - transcript8631.chr1.nic@MRPL55 transcript8631.chr1.nic protein_coding 228109149,228108955,228108437,228108235,228107668,228106681 228109305,228109021,228108474,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 3.75 Transcript Type= NA chr1 228106679 228109299 228106679 228109299 - ENST00000366747.7@MRPL55 ENST00000366747.7 protein_coding 228109261,228108437,228108235,228107668,228106679 228109299,228108474,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 1.03 Transcript Type= protein_coding chr1 228106681 228109305 228106681 228109305 - transcript8637.chr1.nic@MRPL55 transcript8637.chr1.nic protein_coding 228109149,228108437,228108235,228107668,228106681 228109305,228109021,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 8.6 Transcript Type= NA chr1 228106681 228109347 228106681 228109347 - transcript8638.chr1.nic@MRPL55 transcript8638.chr1.nic protein_coding 228109261,228108437,228108235,228107668,228106681 228109347,228109021,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 3.17 Transcript Type= NA chr1 228106681 228109305 228106681 228109305 - transcript8650.chr1.nic@MRPL55 transcript8650.chr1.nic protein_coding 228109149,228107668,228106681 228109305,228109021,228106918 Gene ID= ENSG00000162910.18 TPM= 9.35 Transcript Type= NA chr1 228106679 228109299 228106679 228109299 - ENST00000295008.8@MRPL55 ENST00000295008.8 protein_coding 228109261,228108955,228108235,228107668,228106679 228109299,228109021,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 10.99 Transcript Type= protein_coding chr1 228106679 228109299 228106679 228109299 - ENST00000336520.7@MRPL55 ENST00000336520.7 protein_coding 228109149,228108955,228108235,228107668,228106679 228109299,228109021,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 14.62 Transcript Type= protein_coding chr1 228106679 228109283 228106679 228109283 - ENST00000348259.9@MRPL55 ENST00000348259.9 protein_coding 228109149,228108235,228107668,228106679 228109283,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 11.9 Transcript Type= protein_coding chr1 228106679 228109299 228106679 228109299 - ENST00000366746.7@MRPL55 ENST00000366746.7 protein_coding 228109261,228108235,228107668,228106679 228109299,228108318,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 4.65 Transcript Type= protein_coding chr1 228106680 228109312 228106680 228109312 - ENST00000391867.7@MRPL55 ENST00000391867.7 protein_coding 228109261,228108955,228108437,228108235,228107668,228106680 228109312,228109021,228108474,228108321,228107869,228106918 Gene ID= ENSG00000162910.18 TPM= 1.94 Transcript Type= protein_coding chr1 228140281 228148952 228140281 228148952 + transcript8653.chr1.nic@GUK1 transcript8653.chr1.nic protein_coding 228140281,228141124,228141626,228145511,228146026,228146842,228147406,228147615,228148371,228148665 228140363,228141288,228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148952 Gene ID= ENSG00000143774.16 TPM= 12.9 Transcript Type= NA chr1 228140230 228148952 228140230 228148952 + transcript8663.chr1.nic@GUK1 transcript8663.chr1.nic protein_coding 228140230,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665 228140363,228141829,228145624,228146067,228146938,228147544,228147699,228148456,228148952 Gene ID= ENSG00000143774.16 TPM= 10.19 Transcript Type= NA chr1 228140228 228148955 228140228 228148955 + ENST00000391865.7@GUK1 ENST00000391865.7 protein_coding 228140228,228145511,228146026,228146842,228147406,228147615,228148371,228148665 228140363,228145624,228146067,228146938,228147544,228147699,228148456,228148955 Gene ID= ENSG00000143774.16 TPM= 182.38 Transcript Type= protein_coding chr1 228140290 228148946 228140290 228148946 + ENST00000312726.8@GUK1 ENST00000312726.8 protein_coding 228140290,228141124,228145511,228146026,228146842,228147406,228147615,228148371,228148665 228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946 Gene ID= ENSG00000143774.16 TPM= 88.97 Transcript Type= protein_coding chr1 228140290 228148955 228140290 228148955 + ENST00000366728.6@GUK1 ENST00000366728.6 protein_coding 228140290,228145511,228146026,228146842,228147406,228147615,228148665 228140363,228145624,228146067,228146938,228147544,228147699,228148955 Gene ID= ENSG00000143774.16 TPM= 11.9 Transcript Type= protein_coding chr1 228140290 228148946 228140290 228148946 + ENST00000492871.5@GUK1 ENST00000492871.5 protein_coding 228140290,228141124,228145511,228146026,228146861,228147406,228147615,228148371,228148665 228140363,228141288,228145624,228146067,228146938,228147544,228147699,228148456,228148946 Gene ID= ENSG00000143774.16 TPM= 4.75 Transcript Type= processed_transcript chr1 228371140 228378874 228371140 228378874 + transcript8694.chr1.nic@OBSCN transcript8694.chr1.nic protein_coding 228371140,228373932,228374314,228374585,228375702,228376008,228376793,228377052,228377489,228377931,228378271,228378618 228373081,228374012,228374424,228374752,228375824,228376178,228376874,228377291,228377712,228378006,228378420,228378874 Gene ID= ENSG00000154358.20 TPM= 5.43 Transcript Type= NA chr1 228393676 228406840 228393676 228406840 - ENST00000284551.10@TRIM11 ENST00000284551.10 protein_coding 228406154,228402066,228400964,228397143,228396947,228393676 228406840,228402161,228401194,228397165,228397047,228395252 Gene ID= ENSG00000154370.15 TPM= 90.55 Transcript Type= protein_coding chr1 228486804 228496996 228486804 228496996 + transcript8704.chr1.nnic@RNF187 transcript8704.chr1.nnic protein_coding 228486804,228487002,228488960,228493053,228493883 228486907,228487878,228489052,228493274,228496996 Gene ID= ENSG00000168159.11 TPM= 771.52 Transcript Type= NA chr1 228735077 228746669 228735077 228746669 + ENST00000366691.3@RHOU ENST00000366691.3 protein_coding 228735077,228737673,228743285 228736004,228737731,228746669 Gene ID= ENSG00000116574.5 TPM= 22.64 Transcript Type= protein_coding chr1 229271143 229305502 229271143 229305502 + transcript8717.chr1.nic@RAB4A transcript8717.chr1.nic protein_coding 229271143,229286486,229288729,229295848,229297520,229298977,229302862,229303806 229271370,229286566,229288843,229295910,229297636,229299072,229302989,229305502 Gene ID= ENSG00000168118.11 TPM= 2.72 Transcript Type= NA chr1 229271062 229305891 229271062 229305891 + ENST00000618010.4@RAB4A ENST00000618010.4 protein_coding 229271062,229295848,229297520,229298977,229302862,229303806 229271370,229295910,229297636,229299072,229302989,229305891 Gene ID= ENSG00000168118.11 TPM= 1.81 Transcript Type= protein_coding chr1 229441298 229508050 229441298 229508050 - transcript8724.chr1.nnic@NUP133 transcript8724.chr1.nnic protein_coding 229507919,229506040,229501999,229500756,229499684,229498136,229495892,229495495,229489955,229487466,229486371,229484054,229477597,229475638,229470580,229466634,229465420,229464624,229463543,229460611,229458161,229452525,229450525,229449126,229444914,229441298 229508050,229506158,229502102,229500863,229499818,229498306,229496047,229495565,229490102,229487613,229486528,229484145,229477760,229475732,229470804,229466756,229465519,229464875,229463676,229460769,229458296,229452643,229450605,229449190,229445002,229442040 Gene ID= ENSG00000069248.11 TPM= 2.72 Transcript Type= NA chr1 229440260 229508341 229440260 229508341 - ENST00000261396.5@NUP133 ENST00000261396.5 protein_coding 229508068,229506040,229501999,229500756,229499684,229498136,229495892,229495495,229489955,229487466,229486371,229484054,229477597,229475638,229470580,229466634,229465420,229464624,229463543,229460611,229458161,229452525,229450525,229449126,229444914,229440260 229508341,229506158,229502102,229500863,229499818,229498306,229496047,229495565,229490102,229487613,229486528,229484145,229477760,229475732,229470804,229466756,229465519,229464875,229463676,229460769,229458296,229452643,229450605,229449190,229445002,229442040 Gene ID= ENSG00000069248.11 TPM= 63.39 Transcript Type= protein_coding chr1 229516582 229558695 229516582 229558695 - ENST00000344517.4@ABCB10 ENST00000344517.4 protein_coding 229558136,229549234,229547499,229542237,229540606,229539456,229531636,229530199,229527229,229525936,229521592,229518841,229516582 229558695,229549434,229547701,229542371,229540752,229539591,229531731,229530408,229527308,229526116,229521635,229518875,229518410 Gene ID= ENSG00000135776.4 TPM= 48.9 Transcript Type= protein_coding chr1 229593121 229626047 229593121 229626047 - ENST00000258281.6@TAF5L ENST00000258281.6 protein_coding 229625885,229614341,229610106,229602195,229593121 229626047,229614485,229610210,229602919,229595094 Gene ID= ENSG00000135801.9 TPM= 1.81 Transcript Type= protein_coding chr1 229626234 229660199 229626234 229660199 + ENST00000258243.6@URB2 ENST00000258243.6 protein_coding 229626234,229627621,229632269,229634917,229643533,229645859,229647510,229651235,229654249,229659100 229626356,229627759,229632445,229638247,229643693,229645969,229647752,229651322,229654388,229660199 Gene ID= ENSG00000135763.9 TPM= 3.62 Transcript Type= protein_coding chr1 230067209 230282124 230067209 230282124 + ENST00000366672.4@GALNT2 ENST00000366672.4 protein_coding 230067209,230178218,230203137,230236014,230236353,230236660,230243306,230246063,230249184,230250457,230255218,230262573,230262922,230265241,230274445,230279303 230067406,230178311,230203290,230236112,230236420,230236725,230243427,230246150,230249271,230250560,230255344,230262665,230263005,230265367,230274564,230282124 Gene ID= ENSG00000143641.9 TPM= 103.68 Transcript Type= protein_coding chr1 230321647 230337466 230321647 230337466 - transcript8755.chr1.nic@PGBD5 transcript8755.chr1.nic protein_coding 230337108,230332844,230325310,230321647 230337466,230333041,230325415,230323620 Gene ID= ENSG00000177614.10 TPM= 7.24 Transcript Type= NA chr1 230702523 230714297 230702523 230714297 - ENST00000366667.4@AGT ENST00000366667.4 protein_coding 230714086,230709995,230705933,230704193,230702523 230714297,230710853,230706200,230704337,230703329 Gene ID= ENSG00000135744.7 TPM= 55.24 Transcript Type= protein_coding chr1 230837119 230869589 230837119 230869589 - ENST00000470540.5@C1orf198 ENST00000470540.5 protein_coding 230869482,230868812,230868180,230855668,230843354,230837119 230869589,230868915,230868402,230855718,230843896,230839908 Gene ID= ENSG00000119280.16 TPM= 5.43 Transcript Type= protein_coding chr1 230837119 230868653 230837119 230868653 - ENST00000366663.9@C1orf198 ENST00000366663.9 protein_coding 230868180,230855668,230843354,230837119 230868653,230855718,230843896,230839908 Gene ID= ENSG00000119280.16 TPM= 131.3 Transcript Type= protein_coding chr1 230906244 230978869 230906244 230978869 - transcript8772.chr1.nic@TTC13 transcript8772.chr1.nic protein_coding 230978560,230961209,230958224,230954333,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906244 230978869,230961303,230958299,230954403,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019 Gene ID= ENSG00000143643.12 TPM= 3.62 Transcript Type= NA chr1 230906243 230978859 230906243 230978859 - ENST00000366662.8@TTC13 ENST00000366662.8 protein_coding 230978560,230961209,230958224,230954333,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243 230978859,230961303,230958299,230954403,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916299,230912758,230911549,230909020,230908791,230907019 Gene ID= ENSG00000143643.12 TPM= 2.72 Transcript Type= protein_coding chr1 230906243 230978838 230906243 230978838 - ENST00000366661.8@TTC13 ENST00000366661.8 protein_coding 230978560,230961209,230958224,230954333,230945389,230943806,230940440,230939386,230933779,230931736,230931298,230928937,230925517,230924841,230923841,230921421,230920510,230916193,230912623,230911470,230908942,230908712,230906243 230978838,230961303,230958299,230954403,230945454,230943898,230940556,230939496,230933861,230931877,230931472,230929093,230925647,230924973,230923933,230921504,230920594,230916302,230912758,230911549,230909020,230908791,230907019 Gene ID= ENSG00000143643.12 TPM= 6.34 Transcript Type= protein_coding chr1 230979074 231000593 230979074 231000593 + transcript8773.chr1.nic@ARV1 transcript8773.chr1.nic protein_coding 230979074,230988320,230990110,230990600,230995760,230997121,231000138 230979279,230988439,230990263,230990698,230995984,230997267,231000593 Gene ID= ENSG00000173409.13 TPM= 2.26 Transcript Type= NA chr1 230979049 231000595 230979049 231000595 + ENST00000310256.6@ARV1 ENST00000310256.6 protein_coding 230979049,230988320,230990110,230995760,230997121,231000138 230979279,230988439,230990263,230995984,230997267,231000595 Gene ID= ENSG00000173409.13 TPM= 22.19 Transcript Type= protein_coding chr1 231018958 231040246 231018958 231040246 - ENST00000366654.4@FAM89A ENST00000366654.4 protein_coding 231039921,231018958 231040246,231020126 Gene ID= ENSG00000182118.7 TPM= 65.2 Transcript Type= protein_coding chr1 231223764 231241181 231223764 231241181 - transcript8790.chr1.nic@C1orf131 transcript8790.chr1.nic protein_coding 231241024,231238857,231229150,231226973,231226739,231226391,231225471,231223764 231241181,231239188,231229209,231227068,231226825,231226492,231225523,231224414 Gene ID= ENSG00000143633.12 TPM= 2.72 Transcript Type= NA chr1 231223763 231241178 231223763 231241178 - ENST00000366651.7@C1orf131 ENST00000366651.7 protein_coding 231241024,231238857,231229150,231226973,231226739,231225471,231223763 231241178,231239188,231229206,231227068,231226825,231225523,231224414 Gene ID= ENSG00000143633.12 TPM= 11.77 Transcript Type= protein_coding chr1 231241176 231277886 231241176 231277886 + transcript8784.chr1.nnic@GNPAT transcript8784.chr1.nnic protein_coding 231241176,231250961,231258222,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499 231241456,231251143,231258309,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277886 Gene ID= ENSG00000116906.11 TPM= 3.62 Transcript Type= NA chr1 231241205 231277793 231241205 231277793 + transcript8789.chr1.nic@GNPAT transcript8789.chr1.nic protein_coding 231241205,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499 231241456,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277793 Gene ID= ENSG00000116906.11 TPM= 11.77 Transcript Type= NA chr1 231241210 231277973 231241210 231277973 + ENST00000366647.8@GNPAT ENST00000366647.8 protein_coding 231241210,231250961,231260507,231262723,231265293,231265712,231266014,231266277,231267680,231270758,231272312,231273922,231275221,231275405,231276135,231277499 231241456,231251143,231260683,231262852,231265420,231265787,231266165,231266407,231267903,231271000,231272391,231274062,231275320,231275498,231276196,231277973 Gene ID= ENSG00000116906.11 TPM= 126.78 Transcript Type= protein_coding chr1 231363751 231422749 231363751 231422749 - transcript8795.chr1.nnic@EGLN1 transcript8795.chr1.nnic protein_coding 231422516,231420998,231373980,231370562,231367569,231363751 231422749,231421963,231374099,231370698,231367636,231366475 Gene ID= ENSG00000135766.8 TPM= 16.3 Transcript Type= NA chr1 231363751 231425044 231363751 231425044 - ENST00000366641.3@EGLN1 ENST00000366641.3 protein_coding 231420998,231373980,231370562,231367569,231363751 231425044,231374099,231370698,231367636,231366475 Gene ID= ENSG00000135766.8 TPM= 108.67 Transcript Type= protein_coding chr1 231363751 231422318 231363751 231422318 - transcript8800.chr1.nnic@EGLN1 transcript8800.chr1.nnic protein_coding 231420998,231373980,231367569,231363751 231422318,231374099,231367636,231366475 Gene ID= ENSG00000135766.8 TPM= 5.43 Transcript Type= NA chr1 231363759 231422745 231363759 231422745 - transcript8802.chr1.nnic@EGLN1 transcript8802.chr1.nnic protein_coding 231420998,231373980,231370562,231363759 231422745,231374099,231370698,231366475 Gene ID= ENSG00000135766.8 TPM= 8.15 Transcript Type= NA chr1 231528637 231565722 231528637 231565722 + transcript8808.chr1.nic@TSNAX-DISC1 transcript8808.chr1.nic protein_coding 231528637,231529255,231537213,231542481,231561128 231528826,231529359,231537327,231542611,231565722 Gene ID= ENSG00000270106.5 TPM= 6.34 Transcript Type= NA chr1 231528653 231566524 231528653 231566524 + ENST00000366639.8@TSNAX ENST00000366639.8 protein_coding 231528653,231529255,231537213,231542481,231561128,231564528 231528826,231529359,231537327,231542611,231561255,231566524 Gene ID= ENSG00000116918.13 TPM= 102.33 Transcript Type= protein_coding chr1 232397645 232630126 232397645 232630126 - transcript8816.chr1.nnic@SIPA1L2 transcript8816.chr1.nnic protein_coding 232629869,232608912,232574174,232533490,232513857,232493527,232490874,232483792,232479627,232471371,232464840,232460887,232445529,232443602,232441768,232441291,232439108,232432247,232428411,232425589,232415494,232403448,232402392,232397645 232630126,232608988,232574222,232533583,232515608,232493660,232491062,232483966,232479730,232471528,232465416,232461161,232445786,232443685,232441868,232441394,232439496,232432471,232428564,232425808,232415625,232403571,232402473,232399273 Gene ID= ENSG00000116991.10 TPM= 3.62 Transcript Type= NA chr1 232397645 232630119 232397645 232630119 - transcript8818.chr1.nnic@SIPA1L2 transcript8818.chr1.nnic protein_coding 232629869,232574174,232513857,232493527,232490874,232483792,232479627,232471371,232464840,232460887,232445529,232443602,232441768,232441291,232439108,232432247,232428411,232425589,232415494,232403448,232402392,232397645 232630119,232574222,232515608,232493660,232491062,232483966,232479730,232471528,232465416,232461161,232445786,232443685,232441868,232441394,232439496,232432471,232428564,232425808,232415625,232403571,232402473,232399273 Gene ID= ENSG00000116991.10 TPM= 3.62 Transcript Type= NA chr1 232950624 232983882 232950624 232983882 + ENST00000366628.9@NTPCR ENST00000366628.9 protein_coding 232950624,232955557,232956347,232969909,232978163 232950744,232955719,232956443,232970118,232983882 Gene ID= ENSG00000135778.11 TPM= 61.58 Transcript Type= protein_coding chr1 232950605 232978482 232950605 232978482 + ENST00000494689.5@NTPCR ENST00000494689.5 protein_coding 232950605,232956347,232969909,232978163 232950744,232956443,232970118,232978482 Gene ID= ENSG00000135778.11 TPM= 1.81 Transcript Type= processed_transcript chr1 233095657 233295582 233095657 233295582 - transcript8826.chr1.nic@PCNX2 transcript8826.chr1.nic protein_coding 233295326,233262958,233262045,233261285,233258028,233252641,233252354,233250739,233236845,233227226,233218031,233217899,233208518,233200154,233198939,233179066,233177802,233161271,233160283,233139714,233135013,233095657 233295582,233263163,233262165,233261321,233259344,233252788,233252499,233250832,233236980,233227371,233218184,233217931,233208689,233200264,233199030,233179175,233177898,233161363,233160433,233139855,233135190,233095863 Gene ID= ENSG00000135749.18 TPM= 2.72 Transcript Type= NA chr1 234372807 234373593 234372807 234373593 - ENST00000451795.1@AL355472.1 ENST00000451795.1 antisense_RNA 234373423,234372807 234373593,234373210 Gene ID= ENSG00000231663.1 TPM= 1.81 Transcript Type= antisense_RNA chr1 234373683 234384045 234373683 234384045 + ENST00000366613.1@COA6 ENST00000366613.1 protein_coding 234373683,234374230,234383723 234373840,234374389,234384045 Gene ID= ENSG00000168275.14 TPM= 9.96 Transcript Type= protein_coding chr1 234373701 234384046 234373701 234384046 + ENST00000366612.1@COA6 ENST00000366612.1 protein_coding 234373701,234383723 234374389,234384046 Gene ID= ENSG00000168275.14 TPM= 1.81 Transcript Type= protein_coding chr1 234391321 234479179 234391321 234479179 - transcript8839.chr1.nnic@TARBP1 transcript8839.chr1.nnic protein_coding 234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234448480,234446803,234437275,234433410,234430087,234429416,234429136,234427576,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391321 234479179,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234448579,234446975,234437372,234433571,234430301,234429677,234429324,234427766,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745 Gene ID= ENSG00000059588.9 TPM= 1.81 Transcript Type= NA chr1 234391313 234479103 234391313 234479103 - ENST00000040877.1@TARBP1 ENST00000040877.1 protein_coding 234478173,234472714,234471188,234467502,234465656,234463837,234460261,234459230,234457667,234450428,234448480,234446803,234437275,234433410,234430087,234429416,234429136,234427576,234427317,234425673,234420702,234418084,234410445,234405903,234401181,234398382,234393646,234393362,234392416,234391313 234479103,234472811,234471257,234467650,234465708,234463934,234460396,234459326,234457756,234450566,234448579,234446975,234437372,234433571,234430301,234429677,234429324,234427766,234427388,234425793,234420812,234418233,234410531,234406099,234401262,234398553,234393837,234393486,234392552,234391745 Gene ID= ENSG00000059588.9 TPM= 18.11 Transcript Type= protein_coding chr1 234604271 234610146 234604271 234610146 - transcript8842.chr1.nnic@IRF2BP2 transcript8842.chr1.nnic protein_coding 234609934,234608447,234604271 234610146,234609539,234607852 Gene ID= ENSG00000168264.10 TPM= 11.32 Transcript Type= NA chr1 234604269 234609525 234604269 234609525 - ENST00000366609.3@IRF2BP2 ENST00000366609.3 protein_coding 234608447,234604269 234609525,234607852 Gene ID= ENSG00000168264.10 TPM= 20.37 Transcript Type= protein_coding chr1 235109336 235128936 235109336 235128936 - ENST00000366607.4@TOMM20 ENST00000366607.4 protein_coding 235128595,235122326,235119818,235113768,235109336 235128936,235122372,235119899,235113910,235112108 Gene ID= ENSG00000173726.10 TPM= 146.7 Transcript Type= protein_coding chr1 235131183 235161457 235131183 235161457 - ENST00000408888.7@RBM34 ENST00000408888.7 protein_coding 235161174,235160893,235160511,235154881,235152706,235148404,235138091,235137877,235136034,235135652,235131183 235161457,235161067,235160647,235155112,235152765,235148447,235138174,235137940,235136073,235135770,235131997 Gene ID= ENSG00000188739.14 TPM= 10.87 Transcript Type= protein_coding chr1 235166895 235328219 235166895 235328219 - ENST00000349213.7@ARID4B ENST00000349213.7 protein_coding 235327769,235326914,235260642,235257160,235255660,235252730,235246420,235240313,235234413,235231113,235229231,235224703,235223166,235221565,235220302,235219793,235196031,235194013,235181585,235177800,235175184,235172618,235166895 235328219,235326968,235260752,235257225,235255750,235252809,235246511,235240451,235234492,235231189,235229385,235224775,235223260,235221662,235220545,235219968,235196115,235194211,235182793,235177913,235175399,235172764,235168652 Gene ID= ENSG00000054267.21 TPM= 6.34 Transcript Type= protein_coding chr1 235328953 235344559 235328953 235344559 + transcript8868.chr1.nnic@GGPS1 transcript8868.chr1.nnic protein_coding 235328953,235335242,235341708,235342011 235330500,235335334,235341778,235344559 Gene ID= ENSG00000152904.11 TPM= 2.26 Transcript Type= NA chr1 235328570 235344532 235328570 235344532 + ENST00000282841.9@GGPS1 ENST00000282841.9 protein_coding 235328570,235335242,235341708,235342011 235328778,235335334,235341778,235344532 Gene ID= ENSG00000152904.11 TPM= 46.64 Transcript Type= protein_coding chr1 235328571 235343138 235328571 235343138 + ENST00000391855.2@GGPS1 ENST00000391855.2 protein_coding 235328571,235341708,235342011 235328778,235341778,235343138 Gene ID= ENSG00000152904.11 TPM= 1.81 Transcript Type= protein_coding chr1 235367409 235448966 235367409 235448966 + transcript8870.chr1.nnic@TBCE transcript8870.chr1.nnic protein_coding 235367409,235380019,235401503,235414433,235419473,235427140,235430705,235432946,235434204,235435745,235436386,235436544,235437322,235438769,235441814,235442852,235448349,235448670 235367504,235380149,235401587,235414618,235419561,235427239,235430804,235433171,235434280,235435840,235436450,235436608,235437474,235438922,235441882,235442911,235448440,235448966 Gene ID= ENSG00000116957.12 TPM= 3.85 Transcript Type= NA chr1 235367360 235448968 235367360 235448968 + ENST00000366601.7@TBCE ENST00000366601.7 protein_coding 235367360,235380019,235401503,235414433,235419473,235427140,235430705,235434204,235435745,235436386,235436544,235437322,235438769,235441814,235442852,235448349,235448670 235367504,235380149,235401587,235414618,235419561,235427239,235430804,235434280,235435840,235436450,235436608,235437474,235438922,235441882,235442911,235448440,235448968 Gene ID= ENSG00000116957.12 TPM= 10.19 Transcript Type= protein_coding chr1 235367360 235448966 235367360 235448966 + ENST00000406207.4@TBCE ENST00000406207.4 protein_coding 235367360,235380019,235401503,235414433,235419473,235427140,235430705,235434204,235435745,235436386,235436544,235437322,235438769,235441814,235442852,235448349,235448670 235367552,235380149,235401587,235414618,235419561,235427239,235430804,235434280,235435840,235436450,235436608,235437474,235438922,235441882,235442911,235448440,235448966 Gene ID= ENSG00000116957.12 TPM= 1.13 Transcript Type= protein_coding chr1 235367409 235448966 235367409 235448966 + transcript8873.chr1.nic@TBCE transcript8873.chr1.nic protein_coding 235367409,235380019,235414433,235419473,235427140,235430705,235434204,235435745,235436386,235436544,235437322,235438769,235441814,235442852,235448349,235448670 235367504,235380149,235414618,235419561,235427239,235430804,235434280,235435840,235436450,235436608,235437474,235438922,235441882,235442911,235448440,235448966 Gene ID= ENSG00000116957.12 TPM= 2.04 Transcript Type= NA chr1 235447192 235504481 235447192 235504481 - transcript8877.chr1.nic@B3GALNT2 transcript8877.chr1.nic protein_coding 235504141,235496186,235494681,235489168,235484322,235480054,235470850,235465636,235458603,235455559,235454156,235453090,235447192 235504481,235496308,235494828,235489268,235484515,235480149,235470960,235465714,235458786,235455684,235454315,235453146,235450340 Gene ID= ENSG00000162885.12 TPM= 9.06 Transcript Type= NA chr1 235478598 235504481 235478598 235504481 - transcript8885.chr1.nic@B3GALNT2 transcript8885.chr1.nic protein_coding 235504141,235494681,235489168,235484322,235478598 235504481,235494828,235489268,235484515,235480149 Gene ID= ENSG00000162885.12 TPM= 1.81 Transcript Type= NA chr1 235449923 235504481 235449923 235504481 - ENST00000366600.7@B3GALNT2 ENST00000366600.7 protein_coding 235504141,235494681,235489168,235484322,235480054,235470850,235465636,235458603,235455559,235454156,235453090,235449923 235504481,235494828,235489268,235484515,235480149,235470960,235465714,235458786,235455684,235454315,235453146,235450340 Gene ID= ENSG00000162885.12 TPM= 4.53 Transcript Type= protein_coding chr1 235826330 235866938 235826330 235866938 - transcript8888.chr1.nic@LYST transcript8888.chr1.nic protein_coding 235866843,235833578,235830226,235826330 235866938,235833667,235830424,235829036 Gene ID= ENSG00000143669.13 TPM= 5.43 Transcript Type= NA chr1 235871964 235883711 235871964 235883711 - transcript8889.chr1.nnic@LYST transcript8889.chr1.nnic protein_coding 235883187,235872661,235871964 235883711,235872747,235872575 Gene ID= ENSG00000143669.13 TPM= 1.81 Transcript Type= NA chr1 236063544 236083982 236063544 236083982 - transcript8899.chr1.nnic@NID1 transcript8899.chr1.nnic protein_coding 236083794,236065309,236063544 236083982,236065524,236064956 Gene ID= ENSG00000116962.14 TPM= 1.81 Transcript Type= NA chr1 235975830 236065162 235975830 236065162 - ENST00000264187.6@NID1 ENST00000264187.6 protein_coding 236064855,236048690,236045457,236041910,236038104,236032401,236029550,236025896,236024070,236017148,236013411,236011921,235993645,235990886,235985379,235981611,235980496,235979822,235978995,235975830 236065162,236048989,236045683,236042292,236038253,236032652,236029750,236026141,236024213,236017273,236013560,236012043,235993872,235991058,235985505,235981782,235980653,235979945,235979107,235977988 Gene ID= ENSG00000116962.14 TPM= 52.52 Transcript Type= protein_coding chr1 236142532 236208909 236142532 236208909 + ENST00000366592.7@GPR137B ENST00000366592.7 protein_coding 236142532,236168706,236178414,236179879,236183778,236205126,236208050 236143036,236168755,236178636,236180028,236183906,236205250,236208909 Gene ID= ENSG00000077585.13 TPM= 13.58 Transcript Type= protein_coding chr1 236215555 236281985 236215555 236281985 - ENST00000354619.9@ERO1B ENST00000354619.9 protein_coding 236281682,236269875,236253422,236252050,236249885,236243422,236236278,236235789,236232828,236230224,236226647,236226269,236225070,236221924,236220832,236215555 236281985,236269994,236253505,236252091,236249967,236243495,236236398,236235835,236232839,236230250,236226739,236226515,236225139,236222010,236220965,236218576 Gene ID= ENSG00000086619.13 TPM= 4.53 Transcript Type= protein_coding chr1 236523926 236550993 236523926 236550993 + transcript8911.chr1.nic@LGALS8 transcript8911.chr1.nic protein_coding 236523926,236525968,236537497,236538879,236540564,236541654,236542761,236542915,236543560,236544750,236548012 236524061,236526115,236537585,236539089,236540683,236541710,236542787,236543040,236543648,236544915,236550993 Gene ID= ENSG00000116977.18 TPM= 3.62 Transcript Type= NA chr1 236523599 236551010 236523599 236551010 + ENST00000366584.8@LGALS8 ENST00000366584.8 protein_coding 236523599,236525968,236537497,236538879,236540564,236541654,236542761,236543560,236544750,236548012 236524061,236526115,236537585,236539089,236540683,236541710,236542787,236543648,236544915,236551010 Gene ID= ENSG00000116977.18 TPM= 11.77 Transcript Type= protein_coding chr1 241497603 241519761 241497603 241519761 - ENST00000366560.3@FH ENST00000366560.3 protein_coding 241519591,241517182,241513603,241511967,241508603,241506003,241504042,241502443,241500437,241497603 241519761,241517316,241513713,241512143,241508785,241506168,241504245,241502570,241500590,241497970 Gene ID= ENSG00000091483.6 TPM= 141.27 Transcript Type= protein_coding chr1 241593602 241640355 241593602 241640355 - ENST00000490673.5@OPN3 ENST00000490673.5 protein_coding 241639882,241597746,241593602 241640355,241597997,241594691 Gene ID= ENSG00000054277.13 TPM= 8.15 Transcript Type= nonsense_mediated_decay chr1 243256070 243500092 243256070 243500092 + transcript8943.chr1.nnic@SDCCAG8 transcript8943.chr1.nnic protein_coding 243256070,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756 243256240,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500092 Gene ID= ENSG00000054282.15 TPM= 1.81 Transcript Type= NA chr1 243256012 243306548 243256012 243306548 + transcript8944.chr1.nic@SDCCAG8 transcript8944.chr1.nic protein_coding 243256012,243270105,243270978,243274543,243286272,243293091,243304713,243305012 243256240,243270257,243271063,243274656,243286397,243293219,243304777,243306548 Gene ID= ENSG00000054282.15 TPM= 15.39 Transcript Type= NA chr1 243256056 243500092 243256056 243500092 + ENST00000366541.7@SDCCAG8 ENST00000366541.7 protein_coding 243256056,243270105,243270978,243274543,243286272,243293091,243304713,243307989,243316755,243330540,243341039,243344215,243378721,243415702,243417968,243426427,243489014,243499756 243256240,243270257,243271063,243274656,243286397,243293219,243304777,243308177,243316893,243330692,243341173,243344331,243378863,243415829,243418076,243426558,243489140,243500092 Gene ID= ENSG00000054282.15 TPM= 6.34 Transcript Type= protein_coding chr1 243612488 243850307 243612488 243850307 - transcript8945.chr1.nic@AKT3 transcript8945.chr1.nic protein_coding 243850040,243843125,243695591,243664772,243645893,243637611,243615096,243613671,243612488 243850307,243843282,243695716,243664883,243646037,243637742,243615161,243613739,243613034 Gene ID= ENSG00000117020.16 TPM= 1.81 Transcript Type= NA chr1 244408494 244452134 244408494 244452134 - ENST00000366535.3@ADSS ENST00000366535.3 protein_coding 244451635,244437666,244436825,244432545,244424321,244423953,244422835,244420170,244418760,244417628,244415981,244411287,244408494 244452134,244437768,244436893,244432595,244424387,244424060,244422916,244420296,244418914,244417752,244416078,244411436,244409638 Gene ID= ENSG00000035687.9 TPM= 62.48 Transcript Type= protein_coding chr1 244653090 244709030 244653090 244709030 + transcript8952.chr1.nnic@DESI2 transcript8952.chr1.nnic protein_coding 244653090,244679064,244686597,244689249,244691879,244705556 244653355,244679139,244686669,244689342,244692020,244709030 Gene ID= ENSG00000121644.18 TPM= 1.81 Transcript Type= NA chr1 244653112 244709030 244653112 244709030 + transcript8954.chr1.nnic@DESI2 transcript8954.chr1.nnic protein_coding 244653112,244653913,244686597,244689249,244691879,244705556 244653355,244654025,244686669,244689342,244692020,244709030 Gene ID= ENSG00000121644.18 TPM= 1.81 Transcript Type= NA chr1 244652935 244709033 244652935 244709033 + ENST00000302550.15@DESI2 ENST00000302550.15 protein_coding 244652935,244686597,244689249,244691879,244705556 244653355,244686669,244689342,244692020,244709033 Gene ID= ENSG00000121644.18 TPM= 28.98 Transcript Type= protein_coding chr1 244835337 244845055 244835337 244845055 + transcript8965.chr1.nnic@COX20 transcript8965.chr1.nnic protein_coding 244835337,244841944,244842195,244843041 244835736,244842058,244842258,244845055 Gene ID= ENSG00000203667.9 TPM= 4.23 Transcript Type= NA chr1 244835322 244845057 244835322 244845057 + ENST00000411948.6@COX20 ENST00000411948.6 protein_coding 244835322,244841944,244842195,244843041 244835756,244842058,244842258,244845057 Gene ID= ENSG00000203667.9 TPM= 65.81 Transcript Type= protein_coding chr1 244970362 245087661 244970362 245087661 + transcript8976.chr1.nic@EFCAB2 transcript8976.chr1.nic protein_coding 244970362,245017242,245059386,245082083,245083442,245083622,245087245 244970443,245017326,245059458,245082162,245083484,245083688,245087661 Gene ID= ENSG00000203666.12 TPM= 2.72 Transcript Type= NA chr1 244969780 244972957 244969780 244972957 + transcript8980.chr1.nnic@EFCAB2 transcript8980.chr1.nnic protein_coding 244969780,244970329,244972509 244970043,244970443,244972957 Gene ID= ENSG00000203666.12 TPM= 1.81 Transcript Type= NA chr1 245511002 245709431 245511002 245709431 + ENST00000366518.4@KIF26B ENST00000366518.4 protein_coding 245511002,245540767,245602577,245607651,245609266,245611793,245646121,245684233,245685405,245698106,245698887,245702458 245511128,245540950,245602783,245607744,245609528,245611976,245646280,245684395,245688807,245698308,245699037,245709431 Gene ID= ENSG00000162849.15 TPM= 6.34 Transcript Type= protein_coding chr1 246540570 246566283 246540570 246566283 - transcript9006.chr1.nnic@TFB2M transcript9006.chr1.nnic protein_coding 246565826,246564346,246556573,246551213,246548545,246544521,246540570 246566283,246564434,246556721,246551302,246548607,246544681,246541202 Gene ID= ENSG00000162851.7 TPM= 2.72 Transcript Type= NA chr1 246540563 246566211 246540563 246566211 - transcript9007.chr1.nnic@TFB2M transcript9007.chr1.nnic protein_coding 246565826,246564346,246551213,246548545,246544521,246540563 246566211,246564434,246551302,246548607,246544681,246541202 Gene ID= ENSG00000162851.7 TPM= 2.72 Transcript Type= NA chr1 246566325 246668336 246566325 246668336 + transcript8987.chr1.nnic@CNST transcript8987.chr1.nnic protein_coding 246566325,246591512,246618258,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700 246566663,246591941,246618401,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668336 Gene ID= ENSG00000162852.13 TPM= 2.72 Transcript Type= NA chr1 246566325 246668339 246566325 246668339 + transcript8994.chr1.nnic@CNST transcript8994.chr1.nnic protein_coding 246566325,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700 246566663,246591941,246621584,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668339 Gene ID= ENSG00000162852.13 TPM= 6.34 Transcript Type= NA chr1 246566376 246668594 246566376 246668594 + transcript8998.chr1.nic@CNST transcript8998.chr1.nic protein_coding 246566376,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700 246566789,246591941,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668594 Gene ID= ENSG00000162852.13 TPM= 4.53 Transcript Type= NA chr1 246566451 246668337 246566451 246668337 + transcript9001.chr1.nic@CNST transcript9001.chr1.nic protein_coding 246566451,246591512,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700 246566663,246591941,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668337 Gene ID= ENSG00000162852.13 TPM= 5.43 Transcript Type= NA chr1 246566446 246668584 246566446 246668584 + ENST00000366513.8@CNST ENST00000366513.8 protein_coding 246566446,246591512,246621429,246631894,246633924,246634473,246641749,246641941,246647139,246660199,246665700 246566663,246591941,246621634,246631924,246634010,246634587,246641770,246642037,246648037,246660334,246668584 Gene ID= ENSG00000162852.13 TPM= 67.01 Transcript Type= protein_coding chr1 246724047 246768137 246724047 246768137 + ENST00000366510.3@SCCPDH ENST00000366510.3 protein_coding 246724047,246726892,246735975,246740172,246744076,246758226,246759034,246759957,246760171,246764246,246766058,246767195 246724612,246727004,246736055,246740301,246744125,246758356,246759151,246760076,246760227,246764357,246766139,246768137 Gene ID= ENSG00000143653.9 TPM= 222.76 Transcript Type= protein_coding chr1 246839377 246931990 246839377 246931990 - transcript9022.chr1.nic@AHCTF1 transcript9022.chr1.nic protein_coding 246931578,246918250,246916142,246913232,246907551,246905541,246903949,246902525,246900337,246900065,246899451,246898208,246895835,246894659,246891779,246890956,246889966,246888394,246888177,246887211,246885493,246877158,246876950,246876037,246867661,246867244,246863924,246861959,246860899,246857691,246855730,246853091,246849615,246843795,246842694,246839377 246931990,246918377,246916395,246913412,246907758,246905657,246904033,246902675,246900469,246900246,246899512,246898336,246895925,246894748,246891919,246891060,246890059,246888517,246888233,246887357,246885680,246877302,246877081,246876187,246867811,246867351,246864116,246862153,246861295,246857814,246855827,246853299,246851442,246843928,246842776,246840998 Gene ID= ENSG00000153207.14 TPM= 6.34 Transcript Type= NA chr1 247036784 247078755 247036784 247078755 - ENST00000366503.2@ZNF670 ENST00000366503.2 protein_coding 247078594,247039411,247038810,247036784 247078755,247039537,247038870,247038427 Gene ID= ENSG00000277462.1 TPM= 5.43 Transcript Type= protein_coding chr1 247298180 247331912 247298180 247331912 - transcript9042.chr1.nic@ZNF496 transcript9042.chr1.nic protein_coding 247331790,247331432,247329966,247329189,247328683,247323154,247310324,247309699,247308475,247298180 247331912,247331647,247330081,247329615,247328866,247323230,247310456,247309806,247308588,247301276 Gene ID= ENSG00000162714.12 TPM= 7.09 Transcript Type= NA chr1 247298180 247331912 247298180 247331912 - transcript9044.chr1.nic@ZNF496 transcript9044.chr1.nic protein_coding 247331790,247331432,247329966,247329189,247328683,247323154,247310324,247308475,247298180 247331912,247331647,247330081,247329615,247328866,247323230,247310456,247309806,247301276 Gene ID= ENSG00000162714.12 TPM= 3.02 Transcript Type= NA chr1 247298180 247331870 247298180 247331870 - transcript9045.chr1.nic@ZNF496 transcript9045.chr1.nic protein_coding 247331432,247329189,247328683,247323154,247310324,247309699,247308475,247298180 247331870,247330081,247328866,247323230,247310456,247309806,247308588,247301276 Gene ID= ENSG00000162714.12 TPM= 3.47 Transcript Type= NA chr1 247416173 247449102 247416173 247449102 + transcript9050.chr1.nic@NLRP3 transcript9050.chr1.nic protein_coding 247416173,247418053,247423230,247423847,247434103,247435970,247443972,247444651,247448405 247416193,247419077,247423349,247425599,247434273,247436140,247444142,247444821,247449102 Gene ID= ENSG00000162711.16 TPM= 1.81 Transcript Type= NA chr1 248810451 248826633 248810451 248826633 - ENST00000366472.5@SH3BP5L ENST00000366472.5 protein_coding 248825835,248824753,248816822,248816534,248814449,248812989,248810451 248826633,248825366,248816884,248816662,248814610,248813162,248812370 Gene ID= ENSG00000175137.10 TPM= 20.83 Transcript Type= protein_coding chr1 248839050 248849517 248839050 248849517 + transcript9058.chr1.nnic@ZNF672 transcript9058.chr1.nnic protein_coding 248839050,248844483,248845566,248847052 248839230,248844636,248845662,248849517 Gene ID= ENSG00000171161.12 TPM= 1.81 Transcript Type= NA chr1 248838280 248849517 248838280 248849517 + ENST00000306562.7@ZNF672 ENST00000306562.7 protein_coding 248838280,248844483,248845566,248847052 248838551,248844636,248845662,248849517 Gene ID= ENSG00000171161.12 TPM= 68.82 Transcript Type= protein_coding chr1 248850005 248859121 248850005 248859121 - transcript9062.chr1.nic@ZNF692 transcript9062.chr1.nic protein_coding 248858918,248858131,248857828,248857234,248856514,248856373,248855725,248855558,248855380,248853937,248850682,248850005 248859121,248858321,248857859,248857497,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 2.44 Transcript Type= NA chr1 248850005 248859121 248850005 248859121 - transcript9063.chr1.nic@ZNF692 transcript9063.chr1.nic protein_coding 248858918,248857234,248856514,248856373,248855725,248855558,248855380,248853937,248850863,248850682,248850005 248859121,248858321,248856562,248856422,248855946,248855635,248855458,248854051,248850947,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 1.81 Transcript Type= NA chr1 248850005 248859121 248850005 248859121 - transcript9064.chr1.nic@ZNF692 transcript9064.chr1.nic protein_coding 248858918,248858131,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850005 248859121,248858321,248857859,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 4.1 Transcript Type= NA chr1 248850005 248859121 248850005 248859121 - transcript9066.chr1.nic@ZNF692 transcript9066.chr1.nic protein_coding 248858918,248858131,248857828,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850005 248859121,248858321,248857859,248857497,248856562,248856422,248855946,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 4.83 Transcript Type= NA chr1 248850005 248859121 248850005 248859121 - transcript9071.chr1.nic@ZNF692 transcript9071.chr1.nic protein_coding 248858918,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850005 248859121,248858321,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 7.72 Transcript Type= NA chr1 248850005 248859121 248850005 248859121 - transcript9072.chr1.nic@ZNF692 transcript9072.chr1.nic protein_coding 248858918,248857234,248856514,248856373,248855725,248855558,248855380,248853937,248850682,248850005 248859121,248858321,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 8.78 Transcript Type= NA chr1 248850005 248858961 248850005 248858961 - transcript9074.chr1.nic@ZNF692 transcript9074.chr1.nic protein_coding 248858918,248858131,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850005 248858961,248858321,248857859,248856562,248856422,248855946,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 3.02 Transcript Type= NA chr1 248850005 248859121 248850005 248859121 - transcript9078.chr1.nic@ZNF692 transcript9078.chr1.nic protein_coding 248858918,248857234,248856514,248856288,248855558,248855380,248853937,248850682,248850005 248859121,248858321,248856562,248856422,248855946,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 7.54 Transcript Type= NA chr1 248850006 248859072 248850006 248859072 - ENST00000306601.8@ZNF692 ENST00000306601.8 protein_coding 248858918,248858131,248857828,248857234,248856514,248856288,248855725,248855558,248855380,248853937,248850682,248850006 248859072,248858321,248857859,248857497,248856562,248856422,248855946,248855635,248855458,248854051,248850781,248850516 Gene ID= ENSG00000171163.15 TPM= 6.82 Transcript Type= protein_coding chr1 248906196 248919946 248906196 248919946 + ENST00000355360.8@PGBD2 ENST00000355360.8 protein_coding 248906196,248913816,248917279 248906342,248913879,248919946 Gene ID= ENSG00000185220.11 TPM= 3.62 Transcript Type= protein_coding chr2 38814 46385 38814 46385 - ENST00000327669.4@FAM110C ENST00000327669.4 protein_coding 45440,38814 46385,41627 Gene ID= ENSG00000184731.5 TPM= 1.81 Transcript Type= protein_coding chr2 161728 175854 161728 175854 - transcript4.chr2.nnic@NA transcript4.chr2.nnic NA 175558,166705,162985,161728 175854,167035,163189,161855 Gene ID= novel_gene_chr2_5 TPM= 3.62 Transcript Type= NA chr2 218138 264838 218138 264838 - transcript18.chr2.nic@SH3YL1 transcript18.chr2.nic protein_coding 264782,253005,249731,247538,234160,233101,231023,229966,224864,218138 264838,253115,249844,247602,234272,233229,231191,230044,224920,219001 Gene ID= ENSG00000035115.21 TPM= 5.6 Transcript Type= NA chr2 218151 264563 218151 264563 - transcript21.chr2.nic@SH3YL1 transcript21.chr2.nic protein_coding 264084,253005,249731,247538,234160,233101,231023,229966,218151 264563,253115,249844,247602,234272,233229,231191,230044,219001 Gene ID= ENSG00000035115.21 TPM= 4.53 Transcript Type= NA chr2 218146 264838 218146 264838 - transcript23.chr2.nic@SH3YL1 transcript23.chr2.nic protein_coding 264782,253005,249731,247538,234160,233101,231023,229966,218146 264838,253115,249844,247602,234272,233229,231191,230044,219001 Gene ID= ENSG00000035115.21 TPM= 13.58 Transcript Type= NA chr2 218136 264032 218136 264032 - ENST00000403712.6@SH3YL1 ENST00000403712.6 protein_coding 263984,253005,249731,247538,234160,233101,231023,229966,218136 264032,253115,249844,247602,234272,233229,231191,230044,219001 Gene ID= ENSG00000035115.21 TPM= 28.62 Transcript Type= protein_coding chr2 218158 264065 218158 264065 - ENST00000356150.9@SH3YL1 ENST00000356150.9 protein_coding 263984,253005,249731,247538,234160,233101,231023,229966,224864,218158 264065,253115,249844,247602,234272,233229,231191,230044,224920,219001 Gene ID= ENSG00000035115.21 TPM= 19.79 Transcript Type= protein_coding chr2 218149 264392 218149 264392 - ENST00000463865.5@SH3YL1 ENST00000463865.5 protein_coding 264084,253005,249731,247538,234160,233101,231023,229966,224864,218149 264392,253115,249844,247602,234272,233229,231191,230044,224920,219001 Gene ID= ENSG00000035115.21 TPM= 5.6 Transcript Type= processed_transcript chr2 264872 278283 264872 278283 + ENST00000272065.9@ACP1 ENST00000272065.9 protein_coding 264872,271866,272037,275140,276980,277227 265007,271939,272150,275201,277085,278283 Gene ID= ENSG00000143727.15 TPM= 115 Transcript Type= protein_coding chr2 264869 278283 264869 278283 + ENST00000272067.10@ACP1 ENST00000272067.10 protein_coding 264869,271866,272192,275140,276980,277227 265007,271939,272305,275201,277085,278283 Gene ID= ENSG00000143727.15 TPM= 105.95 Transcript Type= protein_coding chr2 279557 289035 279557 289035 - transcript37.chr2.nnic@ALKAL2 transcript37.chr2.nnic protein_coding 288988,288553,287583,286290,286123,283111,279557 289035,288789,287892,286343,286203,283175,280152 Gene ID= ENSG00000189292.15 TPM= 53.05 Transcript Type= NA chr2 279557 288984 279557 288984 - transcript47.chr2.nic@ALKAL2 transcript47.chr2.nic protein_coding 288553,287583,286290,286123,283111,279557 288984,287892,286343,286203,283175,280152 Gene ID= ENSG00000189292.15 TPM= 68.44 Transcript Type= NA chr2 279559 288082 279559 288082 - transcript50.chr2.nic@ALKAL2 transcript50.chr2.nic protein_coding 287583,286290,286123,283111,279559 288082,286343,286203,283175,280152 Gene ID= ENSG00000189292.15 TPM= 11.09 Transcript Type= NA chr2 278287 288855 278287 288855 - transcript51.chr2.nnic@ALKAL2 transcript51.chr2.nnic protein_coding 288553,287583,286290,283111,278287 288855,287892,286343,283175,280152 Gene ID= ENSG00000189292.15 TPM= 14.49 Transcript Type= NA chr2 1631888 1744547 1631888 1744547 - transcript75.chr2.nic@PXDN transcript75.chr2.nic protein_coding 1744256,1693063,1691928,1684080,1683656,1680193,1676927,1673643,1666214,1664958,1663605,1662072,1660881,1654400,1653628,1648172,1644618,1643368,1639302,1638846,1635408,1631888 1744547,1693134,1691999,1684151,1683727,1680362,1677044,1673812,1666486,1665074,1663763,1662184,1661037,1654508,1653785,1649675,1644752,1643576,1639422,1638978,1635521,1634323 Gene ID= ENSG00000130508.10 TPM= 3.62 Transcript Type= NA chr2 1631887 1744506 1631887 1744506 - ENST00000252804.8@PXDN ENST00000252804.8 protein_coding 1744256,1693063,1691928,1687632,1684080,1683656,1680193,1676927,1673643,1666214,1664958,1663605,1662072,1660881,1654400,1653628,1648172,1644618,1643368,1639302,1638846,1635408,1631887 1744506,1693134,1691999,1687703,1684151,1683727,1680362,1677044,1673812,1666486,1665074,1663763,1662184,1661037,1654508,1653785,1649675,1644752,1643576,1639422,1638978,1635521,1634323 Gene ID= ENSG00000130508.10 TPM= 16.3 Transcript Type= protein_coding chr2 3188925 3377882 3188925 3377882 - ENST00000382125.8@EIPR1 ENST00000382125.8 protein_coding 3377648,3354550,3338017,3257299,3214149,3196881,3193999,3192414,3188925 3377882,3354633,3338149,3257455,3214248,3197017,3194166,3192581,3189508 Gene ID= ENSG00000032389.12 TPM= 40.75 Transcript Type= protein_coding chr2 3379675 3479567 3379675 3479567 + ENST00000382110.6@TRAPPC12 ENST00000382110.6 protein_coding 3379675,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219 3379839,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479567 Gene ID= ENSG00000171853.15 TPM= 6.79 Transcript Type= protein_coding chr2 3379685 3479571 3379685 3479571 + transcript85.chr2.nic@TRAPPC12 transcript85.chr2.nic protein_coding 3379685,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3478846,3479219 3379876,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3478933,3479571 Gene ID= ENSG00000171853.15 TPM= 5.43 Transcript Type= NA chr2 3379686 3479566 3379686 3479566 + ENST00000324266.9@TRAPPC12 ENST00000324266.9 protein_coding 3379686,3387620,3401777,3421881,3424525,3443779,3457621,3460263,3465597,3477695,3478846,3479219 3379876,3388670,3401893,3421994,3424663,3443891,3457693,3460336,3465695,3477795,3478933,3479566 Gene ID= ENSG00000171853.15 TPM= 54.79 Transcript Type= protein_coding chr2 3497361 3519736 3497361 3519736 - ENST00000327435.10@ADI1 ENST00000327435.10 protein_coding 3519368,3513857,3500814,3497361 3519736,3513976,3500993,3499082 Gene ID= ENSG00000182551.13 TPM= 217.33 Transcript Type= protein_coding chr2 3558454 3562142 3558454 3562142 + transcript98.chr2.nnic@RNASEH1-AS1 transcript98.chr2.nnic antisense_RNA 3558454,3559404,3561317 3558998,3559729,3562142 Gene ID= ENSG00000234171.2 TPM= 5.43 Transcript Type= NA chr2 3558474 3561721 3558474 3561721 + transcript99.chr2.nnic@RNASEH1-AS1 transcript99.chr2.nnic antisense_RNA 3558474,3558625,3561317 3558521,3558998,3561721 Gene ID= ENSG00000234171.2 TPM= 1.81 Transcript Type= NA chr2 3558492 3561745 3558492 3561745 + ENST00000438436.2@RNASEH1-AS1 ENST00000438436.2 antisense_RNA 3558492,3559448,3561317 3558998,3559729,3561745 Gene ID= ENSG00000234171.2 TPM= 1.81 Transcript Type= antisense_RNA chr2 3575205 3580919 3575205 3580919 + ENST00000304921.9@RPS7 ENST00000304921.9 protein_coding 3575205,3575592,3575817,3576487,3577710,3580110,3580805 3575350,3575684,3575888,3576630,3577774,3580260,3580919 Gene ID= ENSG00000171863.12 TPM= 250.23 Transcript Type= protein_coding chr2 3575325 3580919 3575325 3580919 + ENST00000403564.5@RPS7 ENST00000403564.5 protein_coding 3575325,3575592,3575817,3576487,3577710,3580110,3580805 3575448,3575684,3575888,3576630,3577774,3580260,3580919 Gene ID= ENSG00000171863.12 TPM= 5.73 Transcript Type= protein_coding chr2 3575325 3580919 3575325 3580919 + ENST00000462576.5@RPS7 ENST00000462576.5 protein_coding 3575325,3575817,3576487,3577710,3580110,3580805 3575684,3575888,3576630,3577774,3580260,3580919 Gene ID= ENSG00000171863.12 TPM= 7.54 Transcript Type= retained_intron chr2 3595092 3644458 3595092 3644458 + ENST00000349077.8@COLEC11 ENST00000349077.8 protein_coding 3595092,3604315,3613311,3637533,3640278,3643444,3643727 3595168,3604470,3613382,3637604,3640331,3643539,3644458 Gene ID= ENSG00000118004.17 TPM= 52.52 Transcript Type= protein_coding chr2 6848316 6865696 6848316 6865696 - ENST00000256722.9@CMPK2 ENST00000256722.9 protein_coding 6865022,6863464,6861184,6851450,6848316 6865696,6863578,6861385,6851683,6849973 Gene ID= ENSG00000134326.11 TPM= 12.68 Transcript Type= protein_coding chr2 6865759 6898232 6865759 6898232 + transcript116.chr2.nic@RSAD2 transcript116.chr2.nic protein_coding 6865759,6883371,6886935,6890176,6893671,6895778 6866045,6883532,6887164,6890325,6893703,6898232 Gene ID= ENSG00000134321.11 TPM= 4.53 Transcript Type= NA chr2 6912280 6918680 6912280 6918680 - transcript123.chr2.nnic@RNF144A-AS1 transcript123.chr2.nnic processed_transcript 6918402,6916816,6915823,6914193,6912280 6918680,6917224,6915967,6914255,6913664 Gene ID= ENSG00000228203.6 TPM= 1.81 Transcript Type= NA chr2 6912280 6918680 6912280 6918680 - transcript124.chr2.nnic@RNF144A-AS1 transcript124.chr2.nnic processed_transcript 6918402,6916850,6915823,6914193,6912280 6918680,6917224,6915967,6914255,6913664 Gene ID= ENSG00000228203.6 TPM= 1.81 Transcript Type= NA chr2 6914552 6918682 6914552 6918682 - ENST00000424351.1@RNF144A-AS1 ENST00000424351.1 processed_transcript 6918402,6914552 6918682,6917224 Gene ID= ENSG00000228203.6 TPM= 2.72 Transcript Type= retained_intron chr2 6917392 7044182 6917392 7044182 + ENST00000320892.10@RNF144A ENST00000320892.10 protein_coding 6917392,6940948,6996916,7014454,7014712,7020473,7024369,7030126,7039629 6917622,6941147,6997061,7014558,7014772,7020680,7024516,7030215,7044182 Gene ID= ENSG00000151692.14 TPM= 23.09 Transcript Type= protein_coding chr2 7023783 7044094 7023783 7044094 + transcript128.chr2.nnic@RNF144A transcript128.chr2.nnic protein_coding 7023783,7024369,7030126,7039629 7023901,7024516,7030215,7044094 Gene ID= ENSG00000151692.14 TPM= 4.98 Transcript Type= NA chr2 8570205 8583810 8570205 8583810 - transcript138.chr2.nic@LINC01814 transcript138.chr2.nic lincRNA 8583717,8579911,8578570,8576911,8570205 8583810,8580047,8578711,8577141,8570581 Gene ID= ENSG00000236008.1 TPM= 1.81 Transcript Type= NA chr2 8728857 8837613 8728857 8837613 - transcript145.chr2.nic@KIDINS220 transcript145.chr2.nic protein_coding 8837480,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747887,8736868,8734655,8733444,8728857 8837613,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8736999,8734753,8733680,8731982 Gene ID= ENSG00000134313.15 TPM= 13.58 Transcript Type= NA chr2 8728929 8837630 8728929 8837630 - ENST00000473731.5@KIDINS220 ENST00000473731.5 protein_coding 8837469,8826986,8818695,8817618,8813237,8812395,8806271,8802930,8800400,8798202,8796771,8793810,8791060,8789880,8788647,8786206,8785741,8779674,8778896,8778639,8776748,8770670,8751466,8750112,8747887,8736868,8734655,8733444,8728929 8837630,8827129,8818793,8817716,8813335,8812493,8806369,8803127,8800498,8798300,8796869,8793987,8791224,8790059,8788812,8786357,8786030,8779814,8779139,8778727,8776892,8770832,8751644,8750335,8748000,8736999,8734753,8733680,8731982 Gene ID= ENSG00000134313.15 TPM= 28.98 Transcript Type= protein_coding chr2 9405672 9423252 9405672 9423252 - transcript161.chr2.nnic@ITGB1BP1 transcript161.chr2.nnic protein_coding 9422479,9419990,9418626,9414178,9412269,9408113,9407449,9406298,9405672 9423252,9420100,9418732,9414256,9412405,9408205,9407598,9406905,9406021 Gene ID= ENSG00000119185.12 TPM= 20.15 Transcript Type= NA chr2 9405672 9423252 9405672 9423252 - transcript163.chr2.nnic@ITGB1BP1 transcript163.chr2.nnic protein_coding 9422479,9418626,9414178,9412269,9408113,9407449,9406298,9405672 9423252,9418732,9414256,9412405,9408205,9407598,9406905,9406021 Gene ID= ENSG00000119185.12 TPM= 12.9 Transcript Type= NA chr2 9405671 9423252 9405671 9423252 - transcript167.chr2.nic@ITGB1BP1 transcript167.chr2.nic protein_coding 9422479,9418626,9414178,9412269,9408113,9407449,9405671 9423252,9418732,9414256,9412405,9408205,9407598,9406905 Gene ID= ENSG00000119185.12 TPM= 12.9 Transcript Type= NA chr2 9405684 9423547 9405684 9423547 - ENST00000355346.8@ITGB1BP1 ENST00000355346.8 protein_coding 9423373,9418626,9414178,9412269,9408113,9407449,9405684 9423547,9418732,9414256,9412405,9408205,9407598,9406905 Gene ID= ENSG00000119185.12 TPM= 21.96 Transcript Type= protein_coding chr2 9422671 9473098 9422671 9473098 + transcript154.chr2.nic@CPSF3 transcript154.chr2.nic protein_coding 9422671,9428765,9429923,9430752,9432511,9433871,9436211,9440491,9441818,9443515,9448198,9452913,9455659,9456933,9459531,9467707,9471343,9472916 9424052,9428828,9430020,9430880,9432688,9433960,9436361,9440666,9441976,9443661,9448350,9453021,9455757,9457027,9459618,9467776,9471439,9473098 Gene ID= ENSG00000119203.13 TPM= 1.81 Transcript Type= NA chr2 9423568 9473101 9423568 9473101 + ENST00000238112.7@CPSF3 ENST00000238112.7 protein_coding 9423568,9428765,9429923,9430752,9432511,9433871,9436211,9440491,9441818,9443515,9448198,9452913,9455659,9456933,9459531,9467707,9471343,9472916 9423823,9428828,9430020,9430880,9432688,9433960,9436361,9440666,9441976,9443661,9448350,9453021,9455757,9457027,9459618,9467776,9471439,9473101 Gene ID= ENSG00000119203.13 TPM= 49.8 Transcript Type= protein_coding chr2 9474537 9489742 9474537 9489742 + ENST00000470914.5@IAH1 ENST00000470914.5 protein_coding 9474537,9478222,9481286,9484432,9488147 9474647,9478370,9481447,9484550,9489742 Gene ID= ENSG00000134330.18 TPM= 10.41 Transcript Type= protein_coding chr2 9474578 9488462 9474578 9488462 + ENST00000351760.11@IAH1 ENST00000351760.11 protein_coding 9474578,9475987,9478254,9481286,9484432,9488147 9474647,9476039,9478370,9481447,9484550,9488462 Gene ID= ENSG00000134330.18 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr2 9488486 9555788 9488486 9555788 - ENST00000310823.7@ADAM17 ENST00000310823.7 protein_coding 9555509,9543153,9536698,9535834,9527786,9526111,9523249,9521203,9518103,9517901,9509979,9505166,9502173,9497114,9494637,9493747,9492898,9491101,9488486 9555788,9543285,9536828,9535922,9527954,9526244,9523338,9521316,9518247,9517989,9510131,9505365,9502276,9497248,9494767,9493825,9492986,9491151,9490518 Gene ID= ENSG00000151694.12 TPM= 9.06 Transcript Type= protein_coding chr2 9583972 9631014 9583972 9631014 - ENST00000238081.7@YWHAQ ENST00000238081.7 protein_coding 9630941,9630159,9591392,9588165,9587414,9583972 9631014,9630534,9591515,9588328,9587509,9585345 Gene ID= ENSG00000134308.13 TPM= 340.03 Transcript Type= protein_coding chr2 9583972 9630616 9583972 9630616 - ENST00000381844.8@YWHAQ ENST00000381844.8 protein_coding 9630159,9591392,9588165,9587414,9583972 9630616,9591515,9588328,9587509,9585345 Gene ID= ENSG00000134308.13 TPM= 79.24 Transcript Type= protein_coding chr2 9843354 9934416 9843354 9934416 + ENST00000263663.9@TAF1B ENST00000263663.9 protein_coding 9843354,9845220,9849373,9851541,9854326,9868276,9875865,9882706,9904859,9910736,9911511,9913159,9919041,9919598,9933783 9843559,9845318,9849460,9851638,9854421,9868429,9876018,9882805,9905006,9910913,9911557,9913249,9919111,9919820,9934416 Gene ID= ENSG00000115750.16 TPM= 6.34 Transcript Type= protein_coding chr2 9843522 9876575 9843522 9876575 + transcript188.chr2.nic@TAF1B transcript188.chr2.nic protein_coding 9843522,9845220,9849373,9851541,9854326,9868276,9875865 9843559,9845318,9849460,9851638,9854421,9868429,9876575 Gene ID= ENSG00000115750.16 TPM= 1.81 Transcript Type= NA chr2 10044245 10054836 10044245 10054836 + ENST00000535335.1@KLF11 ENST00000535335.1 protein_coding 10044245,10046150,10047650,10052227 10044451,10046419,10048595,10054836 Gene ID= ENSG00000172059.10 TPM= 4.53 Transcript Type= protein_coding chr2 10043555 10054836 10043555 10054836 + ENST00000305883.5@KLF11 ENST00000305883.5 protein_coding 10043555,10046150,10047650,10052227 10043758,10046419,10048595,10054836 Gene ID= ENSG00000172059.10 TPM= 34.41 Transcript Type= protein_coding chr2 10302867 10427619 10302867 10427619 + transcript206.chr2.nic@HPCAL1 transcript206.chr2.nic protein_coding 10302867,10396835,10408562,10419734,10422983,10426724 10303177,10396920,10408734,10420135,10423088,10427619 Gene ID= ENSG00000115756.12 TPM= 23.77 Transcript Type= NA chr2 10302907 10427609 10302907 10427609 + ENST00000307845.7@HPCAL1 ENST00000307845.7 protein_coding 10302907,10396835,10419734,10422983,10426724 10303177,10396920,10420135,10423088,10427609 Gene ID= ENSG00000115756.12 TPM= 201.1 Transcript Type= protein_coding chr2 10368678 10427616 10368678 10427616 + ENST00000613496.4@HPCAL1 ENST00000613496.4 protein_coding 10368678,10396835,10419734,10422983,10426724 10368737,10396920,10420135,10423088,10427616 Gene ID= ENSG00000115756.12 TPM= 1.88 Transcript Type= protein_coding chr2 10571655 10689967 10571655 10689967 - ENST00000381685.9@NOL10 ENST00000381685.9 protein_coding 10689796,10684567,10681971,10675794,10673520,10671554,10668658,10667218,10662959,10659172,10657742,10654481,10644320,10607185,10603078,10602776,10600853,10589578,10589043,10577636,10571655 10689967,10684612,10682069,10675871,10673557,10671690,10668723,10667278,10663044,10659250,10657891,10654547,10644372,10607311,10603157,10602874,10600942,10589751,10589290,10577738,10572190 Gene ID= ENSG00000115761.15 TPM= 14.49 Transcript Type= protein_coding chr2 10783391 10812844 10783391 10812844 - ENST00000272227.7@PDIA6 ENST00000272227.7 protein_coding 10812678,10802499,10797700,10797081,10793096,10791795,10790719,10789749,10788897,10788697,10787281,10784934,10783391 10812844,10802640,10797757,10797207,10793202,10791925,10790833,10789889,10788981,10788769,10787439,10785030,10784326 Gene ID= ENSG00000143870.12 TPM= 598.57 Transcript Type= protein_coding chr2 11155372 11178874 11155372 11178874 + ENST00000295083.7@PQLC3 ENST00000295083.7 protein_coding 11155372,11160466,11160625,11164204,11171925,11174968,11177737 11155689,11160548,11160694,11164261,11172045,11175009,11178874 Gene ID= ENSG00000162976.12 TPM= 57.05 Transcript Type= protein_coding chr2 11155464 11178854 11155464 11178854 + transcript254.chr2.nnic@PQLC3 transcript254.chr2.nnic protein_coding 11155464,11160466,11160625,11164204,11177737 11155689,11160548,11160694,11164261,11178854 Gene ID= ENSG00000162976.12 TPM= 1.81 Transcript Type= NA chr2 11155372 11178870 11155372 11178870 + ENST00000441908.6@PQLC3 ENST00000441908.6 protein_coding 11155372,11160466,11160625,11164204,11171925,11177737 11155689,11160548,11160694,11164261,11172045,11178870 Gene ID= ENSG00000162976.12 TPM= 10.87 Transcript Type= protein_coding chr2 11179761 11344585 11179761 11344585 - ENST00000315872.10@ROCK2 ENST00000315872.10 protein_coding 11343996,11287655,11286539,11249661,11235702,11227254,11224322,11222083,11221198,11218966,11218455,11217090,11216158,11215510,11215321,11214840,11214357,11211681,11208287,11207726,11202052,11201310,11200957,11198681,11198491,11197526,11197180,11194955,11194256,11193779,11192451,11192148,11179761 11344585,11287736,11286639,11249798,11235962,11227398,11224460,11222174,11221357,11219026,11218466,11217169,11216206,11215645,11215412,11215086,11214463,11211840,11208447,11207910,11202121,11201413,11201143,11198774,11198585,11197705,11197348,11195025,11194344,11193857,11192712,11192361,11183440 Gene ID= ENSG00000134318.13 TPM= 9.06 Transcript Type= protein_coding chr2 11444375 11466177 11444375 11466177 - ENST00000307236.8@E2F6 ENST00000307236.8 protein_coding 11465772,11458281,11457179,11453582,11451651,11450012,11447627,11444375 11466177,11458351,11457233,11453798,11451806,11450126,11447774,11446523 Gene ID= ENSG00000169016.16 TPM= 4.07 Transcript Type= protein_coding chr2 11444375 11466177 11444375 11466177 - ENST00000546212.2@E2F6 ENST00000546212.2 protein_coding 11465772,11453582,11451651,11450012,11447627,11444375 11466177,11453798,11451806,11450126,11447774,11446523 Gene ID= ENSG00000169016.16 TPM= 6.79 Transcript Type= protein_coding chr2 11658178 11670164 11658178 11670164 - ENST00000306928.5@NTSR2 ENST00000306928.5 protein_coding 11669506,11661967,11660043,11658178 11670164,11662240,11660133,11658722 Gene ID= ENSG00000169006.6 TPM= 1.81 Transcript Type= protein_coding chr2 11746585 11827405 11746585 11827405 + transcript269.chr2.nnic@LPIN1 transcript269.chr2.nnic protein_coding 11746585,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829,11784763,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632 11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827405 Gene ID= ENSG00000134324.11 TPM= 3.4 Transcript Type= NA chr2 11746585 11827405 11746585 11827405 + transcript270.chr2.nic@LPIN1 transcript270.chr2.nic protein_coding 11746585,11765533,11767763,11771372,11773620,11776086,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632 11746671,11765733,11767858,11771679,11773745,11776193,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827405 Gene ID= ENSG00000134324.11 TPM= 18.18 Transcript Type= NA chr2 11746592 11827405 11746592 11827405 + transcript271.chr2.nnic@LPIN1 transcript271.chr2.nnic protein_coding 11746592,11755747,11765533,11767763,11771372,11773620,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632 11746671,11755864,11765733,11767858,11771679,11773745,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827405 Gene ID= ENSG00000134324.11 TPM= 3.69 Transcript Type= NA chr2 11746588 11827409 11746588 11827409 + ENST00000256720.6@LPIN1 ENST00000256720.6 protein_coding 11746588,11765533,11767763,11771372,11773620,11779519,11782201,11783829,11784886,11787074,11788387,11791914,11795408,11802907,11804423,11805070,11815088,11819484,11820411,11824632 11746671,11765733,11767858,11771679,11773745,11779645,11782507,11783922,11785076,11787167,11788456,11792006,11795487,11803033,11804571,11805156,11815240,11819598,11820514,11827409 Gene ID= ENSG00000134324.11 TPM= 15.47 Transcript Type= protein_coding chr2 12716878 12724823 12716878 12724823 + transcript277.chr2.nnic@TRIB2 transcript277.chr2.nnic protein_coding 12716878,12717252,12717850,12718322,12723260,12724629 12717010,12717685,12718128,12718577,12723552,12724823 Gene ID= ENSG00000071575.11 TPM= 2.72 Transcript Type= NA chr2 12715884 12742731 12715884 12742731 + transcript281.chr2.nnic@TRIB2 transcript281.chr2.nnic protein_coding 12715884,12717837,12723260,12740326 12717685,12718577,12723552,12742731 Gene ID= ENSG00000071575.11 TPM= 6.52 Transcript Type= NA chr2 12716878 12724823 12716878 12724823 + transcript282.chr2.nic@TRIB2 transcript282.chr2.nic protein_coding 12716878,12717252,12723260,12724629 12717010,12718577,12723552,12724823 Gene ID= ENSG00000071575.11 TPM= 7.24 Transcript Type= NA chr2 12716878 12742731 12716878 12742731 + transcript283.chr2.nic@TRIB2 transcript283.chr2.nic protein_coding 12716878,12717252,12723260,12740326 12717010,12718577,12723552,12742731 Gene ID= ENSG00000071575.11 TPM= 20.4 Transcript Type= NA chr2 12716889 12742734 12716889 12742734 + ENST00000155926.8@TRIB2 ENST00000155926.8 protein_coding 12716889,12723260,12740326 12718577,12723552,12742734 Gene ID= ENSG00000071575.11 TPM= 53.91 Transcript Type= protein_coding chr2 14632686 14640046 14632686 14640046 + ENST00000295092.2@FAM84A ENST00000295092.2 protein_coding 14632686,14633944 14632937,14640046 Gene ID= ENSG00000162981.13 TPM= 6.34 Transcript Type= protein_coding chr2 15166909 15561330 15166909 15561330 - ENST00000281513.9@NBAS ENST00000281513.9 protein_coding 15561188,15558580,15556783,15554061,15553426,15551493,15539223,15536418,15534543,15511212,15504145,15488894,15478226,15475687,15474067,15473222,15468382,15467664,15467329,15461687,15461201,15427711,15424315,15417527,15415546,15402168,15396413,15394227,15383215,15379602,15374608,15366580,15356303,15353553,15351992,15330598,15328199,15327750,15309171,15308216,15292537,15287073,15276851,15275484,15238468,15234545,15232422,15218773,15190264,15186742,15178988,15166909 15561330,15558634,15556819,15554138,15553473,15551536,15539356,15536551,15534641,15511350,15504213,15489022,15478289,15475880,15474324,15473347,15468533,15467804,15467407,15461791,15461337,15427794,15424468,15417712,15415719,15402301,15396475,15394349,15383317,15379831,15374720,15366693,15356416,15353710,15352081,15330765,15328312,15327870,15309247,15308353,15292766,15287183,15277101,15275818,15238686,15234747,15232511,15218968,15190403,15186880,15179116,15167323 Gene ID= ENSG00000151779.12 TPM= 8.15 Transcript Type= protein_coding chr2 16549459 16665834 16549459 16665834 - ENST00000381323.7@FAM49A ENST00000381323.7 protein_coding 16665780,16623864,16588050,16565646,16563989,16562005,16561456,16561161,16560990,16559460,16555069,16549459 16665834,16624019,16588129,16565767,16564094,16562141,16561533,16561277,16561069,16559586,16555139,16552999 Gene ID= ENSG00000197872.11 TPM= 15.39 Transcript Type= protein_coding chr2 17540653 17656439 17540653 17656439 + ENST00000295156.8@VSNL1 ENST00000295156.8 protein_coding 17540653,17592070,17649410,17655197 17540918,17592236,17649625,17656439 Gene ID= ENSG00000163032.11 TPM= 19.92 Transcript Type= protein_coding chr2 17663812 17753803 17663812 17753803 - ENST00000448223.6@SMC6 ENST00000448223.6 protein_coding 17753626,17752978,17745827,17741612,17738221,17731741,17731078,17726389,17725257,17721142,17720940,17718077,17717088,17716741,17716086,17714861,17708639,17707219,17703157,17701829,17700208,17696289,17695152,17683638,17678859,17670423,17666420,17663812 17753803,17753064,17745951,17741729,17738326,17731877,17731139,17726469,17725358,17721261,17721038,17718223,17717176,17716905,17716264,17715065,17708753,17707379,17703292,17701909,17700378,17696426,17695297,17683763,17678964,17670575,17666517,17665613 Gene ID= ENSG00000163029.15 TPM= 2.26 Transcript Type= protein_coding chr2 17663812 17753830 17663812 17753830 - ENST00000351948.8@SMC6 ENST00000351948.8 protein_coding 17753626,17745827,17741612,17738221,17731741,17731078,17726389,17725257,17721142,17720940,17718077,17717088,17716741,17716086,17714861,17708639,17707219,17703157,17701829,17700208,17696289,17695152,17683638,17678859,17670423,17666420,17663812 17753830,17745951,17741729,17738326,17731877,17731139,17726469,17725358,17721261,17721038,17718223,17717176,17716905,17716264,17715065,17708753,17707379,17703292,17701909,17700378,17696426,17695297,17683763,17678964,17670575,17666517,17665613 Gene ID= ENSG00000163029.15 TPM= 7.7 Transcript Type= protein_coding chr2 17878678 17932961 17878678 17932961 + ENST00000304101.8@KCNS3 ENST00000304101.8 protein_coding 17878678,17917680,17930950 17878806,17917871,17932961 Gene ID= ENSG00000170745.11 TPM= 5.43 Transcript Type= protein_coding chr2 18554723 18560680 18554723 18560680 - ENST00000381249.3@RDH14 ENST00000381249.3 protein_coding 18560180,18554723 18560680,18555808 Gene ID= ENSG00000240857.1 TPM= 61.58 Transcript Type= protein_coding chr2 19351485 19358653 19351485 19358653 - ENST00000272223.2@OSR1 ENST00000272223.2 protein_coding 19358341,19353141,19351485 19358653,19353837,19352410 Gene ID= ENSG00000143867.6 TPM= 4.53 Transcript Type= protein_coding chr2 19896759 19901685 19896759 19901685 - transcript324.chr2.nnic@TTC32 transcript324.chr2.nnic protein_coding 19901476,19897869,19896759 19901685,19898035,19897126 Gene ID= ENSG00000183891.5 TPM= 3.62 Transcript Type= NA chr2 19992111 20012694 19992111 20012694 - ENST00000407540.7@MATN3 ENST00000407540.7 protein_coding 20012409,20005744,20003161,20001955,20000441,19997134,19994299,19992111 20012694,20006310,20003286,20002080,20000566,19997259,19994409,19993166 Gene ID= ENSG00000132031.12 TPM= 2.72 Transcript Type= protein_coding chr2 20032650 20052028 20032650 20052028 - ENST00000175091.4@LAPTM4A ENST00000175091.4 protein_coding 20051410,20040891,20037538,20037316,20034967,20034317,20032650 20052028,20041011,20037614,20037438,20035062,20034415,20033279 Gene ID= ENSG00000068697.6 TPM= 408.4 Transcript Type= protein_coding chr2 20200799 20225433 20200799 20225433 - ENST00000381150.5@SDC1 ENST00000381150.5 protein_coding 20225262,20224802,20205343,20203813,20203087,20200799 20225433,20225086,20205424,20204291,20203222,20202935 Gene ID= ENSG00000115884.10 TPM= 3.62 Transcript Type= protein_coding chr2 20248716 20350847 20248716 20350847 - transcript342.chr2.nic@PUM2 transcript342.chr2.nic protein_coding 20350810,20327310,20318537,20312236,20311494,20308314,20307978,20297553,20294376,20290652,20283343,20282947,20263193,20260337,20258243,20256033,20255216,20254863,20253822,20248716 20350847,20327378,20318645,20312423,20311663,20308584,20308071,20297678,20294518,20290790,20283486,20283231,20263460,20260466,20258371,20256170,20255341,20254984,20254014,20251716 Gene ID= ENSG00000055917.15 TPM= 7.24 Transcript Type= NA chr2 20447074 20449445 20447074 20449445 + ENST00000272233.5@RHOB ENST00000272233.5 protein_coding 20447074 20449445 Gene ID= ENSG00000143878.9 TPM= 364.03 Transcript Type= protein_coding chr2 20622188 20651103 20622188 20651103 - transcript352.chr2.nic@HS1BP3 transcript352.chr2.nic protein_coding 20651032,20645340,20640973,20638436,20624732,20622188 20651103,20645505,20641180,20638652,20624892,20624031 Gene ID= ENSG00000118960.12 TPM= 2.72 Transcript Type= NA chr2 20622188 20651092 20622188 20651092 - transcript354.chr2.nnic@HS1BP3 transcript354.chr2.nnic protein_coding 20651032,20645340,20638436,20624732,20622188 20651092,20645505,20638652,20624892,20624031 Gene ID= ENSG00000118960.12 TPM= 1.81 Transcript Type= NA chr2 20634730 20651158 20634730 20651158 - transcript355.chr2.nnic@HS1BP3 transcript355.chr2.nnic protein_coding 20651032,20645340,20640973,20638436,20634730 20651158,20645505,20641180,20638652,20635002 Gene ID= ENSG00000118960.12 TPM= 1.81 Transcript Type= NA chr2 20617822 20651089 20617822 20651089 - ENST00000304031.7@HS1BP3 ENST00000304031.7 protein_coding 20651032,20645340,20640973,20638436,20624732,20623896,20617822 20651089,20645505,20641180,20638652,20624892,20624031,20619245 Gene ID= ENSG00000118960.12 TPM= 40.75 Transcript Type= protein_coding chr2 20685052 20823084 20685052 20823084 - transcript358.chr2.nnic@LDAH transcript358.chr2.nnic protein_coding 20823037,20809038,20801310,20790255,20774810,20739971,20701570,20685052 20823084,20809225,20801465,20790398,20774979,20740205,20701652,20687094 Gene ID= ENSG00000118961.14 TPM= 3.2 Transcript Type= NA chr2 20685054 20823114 20685054 20823114 - ENST00000237822.7@LDAH ENST00000237822.7 protein_coding 20823037,20801310,20790255,20774810,20739971,20701570,20685054 20823114,20801465,20790398,20774979,20740205,20701652,20687094 Gene ID= ENSG00000118961.14 TPM= 23.12 Transcript Type= protein_coding chr2 20684014 20823130 20684014 20823130 - ENST00000541941.5@LDAH ENST00000541941.5 protein_coding 20823037,20790255,20774810,20739971,20701570,20684014 20823130,20790398,20774979,20740205,20701652,20687094 Gene ID= ENSG00000118961.14 TPM= 1.39 Transcript Type= protein_coding chr2 20684014 20823130 20684014 20823130 - ENST00000435420.6@LDAH ENST00000435420.6 protein_coding 20823037,20801292,20774810,20739971,20701570,20684014 20823130,20801465,20774979,20740205,20701652,20687094 Gene ID= ENSG00000118961.14 TPM= 1.99 Transcript Type= protein_coding chr2 20684014 20823130 20684014 20823130 - ENST00000440866.6@LDAH ENST00000440866.6 protein_coding 20823037,20801310,20790255,20774810,20701570,20684014 20823130,20801465,20790398,20774979,20701652,20687094 Gene ID= ENSG00000118961.14 TPM= 1.81 Transcript Type= protein_coding chr2 20684014 20823130 20684014 20823130 - ENST00000619656.4@LDAH ENST00000619656.4 protein_coding 20823037,20774810,20739971,20701570,20684014 20823130,20774979,20740205,20701652,20687094 Gene ID= ENSG00000118961.14 TPM= 1.09 Transcript Type= protein_coding chr2 23523818 23708605 23523818 23708605 + transcript371.chr2.nnic@KLHL29 transcript371.chr2.nnic protein_coding 23523818,23562152,23639139,23642338,23645054,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481 23523938,23562481,23639280,23642850,23645104,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708605 Gene ID= ENSG00000119771.14 TPM= 1.81 Transcript Type= NA chr2 23385175 23708605 23385175 23708605 + transcript372.chr2.nnic@KLHL29 transcript372.chr2.nnic protein_coding 23385175,23562152,23639139,23642338,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481 23385780,23562481,23639280,23642850,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708605 Gene ID= ENSG00000119771.14 TPM= 5.43 Transcript Type= NA chr2 23385177 23708605 23385177 23708605 + transcript373.chr2.nnic@KLHL29 transcript373.chr2.nnic protein_coding 23385177,23475560,23562152,23639139,23642338,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481 23385780,23475667,23562481,23639280,23642850,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708605 Gene ID= ENSG00000119771.14 TPM= 2.72 Transcript Type= NA chr2 23523818 23708605 23523818 23708605 + transcript374.chr2.nnic@KLHL29 transcript374.chr2.nnic protein_coding 23523818,23562152,23639139,23642338,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481 23523938,23562481,23639280,23642850,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708605 Gene ID= ENSG00000119771.14 TPM= 1.81 Transcript Type= NA chr2 23385177 23644271 23385177 23644271 + transcript377.chr2.nic@KLHL29 transcript377.chr2.nic protein_coding 23385177,23475560,23562152,23639139,23642338 23385780,23475667,23562481,23639280,23644271 Gene ID= ENSG00000119771.14 TPM= 2.72 Transcript Type= NA chr2 23385217 23708606 23385217 23708606 + ENST00000486442.5@KLHL29 ENST00000486442.5 protein_coding 23385217,23475560,23562152,23639139,23642338,23684399,23691674,23693269,23695623,23695951,23696333,23703186,23703719,23706481 23385780,23475667,23562481,23639280,23642850,23684537,23691876,23693528,23695821,23696133,23696513,23703379,23703863,23708606 Gene ID= ENSG00000119771.14 TPM= 10.87 Transcript Type= protein_coding chr2 23940417 24000821 23940417 24000821 + transcript386.chr2.nnic@UBXN2A transcript386.chr2.nnic protein_coding 23940417,23958301,23971276,23976969,23982896,23984673,23987478,23999672 23940648,23958355,23971414,23977075,23983033,23984831,23987547,24000821 Gene ID= ENSG00000173960.13 TPM= 1.81 Transcript Type= NA chr2 23940440 24000830 23940440 24000830 + transcript387.chr2.nnic@UBXN2A transcript387.chr2.nnic protein_coding 23940440,23952470,23958301,23971276,23976969,23982896,23984673,23999672 23940648,23952587,23958355,23971414,23977075,23983033,23984831,24000830 Gene ID= ENSG00000173960.13 TPM= 2.72 Transcript Type= NA chr2 23940419 24004909 23940419 24004909 + ENST00000309033.4@UBXN2A ENST00000309033.4 protein_coding 23940419,23958301,23971276,23976969,23982896,23984673,23999672 23940648,23958355,23971414,23977075,23983033,23984831,24004909 Gene ID= ENSG00000173960.13 TPM= 15.39 Transcript Type= protein_coding chr2 23940681 24000830 23940681 24000830 + transcript390.chr2.nnic@UBXN2A transcript390.chr2.nnic protein_coding 23940681,23958301,23971276,23976969,23982896,23984673,23999672 23940856,23958355,23971414,23977075,23983033,23984831,24000830 Gene ID= ENSG00000173960.13 TPM= 1.81 Transcript Type= NA chr2 24029340 24047353 24029340 24047353 - ENST00000295148.8@WDCP ENST00000295148.8 protein_coding 24047314,24037677,24032829,24029340 24047353,24039512,24032946,24031162 Gene ID= ENSG00000163026.11 TPM= 12.68 Transcript Type= protein_coding chr2 24049694 24063679 24049694 24063679 + transcript397.chr2.nnic@MFSD2B transcript397.chr2.nnic protein_coding 24049694,24053902,24060814,24063019 24049773,24053949,24060926,24063679 Gene ID= ENSG00000205639.10 TPM= 1.81 Transcript Type= NA chr2 24049714 24063681 24049714 24063681 + ENST00000380986.8@FKBP1B ENST00000380986.8 protein_coding 24049714,24053902,24060814,24063064 24049886,24053949,24060926,24063681 Gene ID= ENSG00000119782.13 TPM= 4.53 Transcript Type= protein_coding chr2 24049701 24063681 24049701 24063681 + ENST00000380991.8@FKBP1B ENST00000380991.8 protein_coding 24049701,24053902,24060814,24063019 24049886,24053949,24060926,24063681 Gene ID= ENSG00000119782.13 TPM= 5.43 Transcript Type= protein_coding chr2 24067584 24076443 24067584 24076443 - ENST00000233468.4@SF3B6 ENST00000233468.4 protein_coding 24076200,24074076,24068321,24067584 24076443,24074194,24068459,24067851 Gene ID= ENSG00000115128.6 TPM= 98.7 Transcript Type= protein_coding chr2 24123466 24169637 24123466 24169637 + transcript412.chr2.nic@FAM228B transcript412.chr2.nic protein_coding 24123466,24135119,24137909,24139370,24146748,24146930,24161506,24164198,24169356 24124460,24135187,24138100,24139450,24146835,24147086,24161613,24164335,24169637 Gene ID= ENSG00000219626.8 TPM= 1.81 Transcript Type= NA chr2 24123466 24169637 24123466 24169637 + transcript413.chr2.nic@FAM228B transcript413.chr2.nic protein_coding 24123466,24135119,24139370,24146748,24146930,24161506,24164198,24167627,24169356 24124460,24135187,24139450,24146835,24147086,24161613,24164335,24167683,24169637 Gene ID= ENSG00000219626.8 TPM= 1.81 Transcript Type= NA chr2 24076828 24169637 24076828 24169637 + transcript421.chr2.nnic@FAM228B transcript421.chr2.nnic protein_coding 24076828,24080876,24095141,24135119,24169356 24076969,24080955,24095229,24135187,24169637 Gene ID= ENSG00000219626.8 TPM= 1.81 Transcript Type= NA chr2 24076828 24097451 24076828 24097451 + transcript429.chr2.nic@FAM228B transcript429.chr2.nic protein_coding 24076828,24080876,24095141 24076969,24080955,24097451 Gene ID= ENSG00000219626.8 TPM= 1.81 Transcript Type= NA chr2 24076828 24176278 24076828 24176278 + transcript416.chr2.nnic@AC008073.3 transcript416.chr2.nnic protein_coding 24076828,24080876,24095141,24164198,24174551,24175467,24175665 24076969,24080955,24095229,24164335,24174718,24175573,24176278 Gene ID= ENSG00000276087.1 TPM= 1.81 Transcript Type= NA chr2 24080752 24085051 24080752 24085051 - transcript427.chr2.nic@TP53I3 transcript427.chr2.nic protein_coding 24084731,24084189,24082885,24080752 24085051,24084331,24083152,24081031 Gene ID= ENSG00000115129.13 TPM= 3.62 Transcript Type= NA chr2 24080746 24084311 24080746 24084311 - ENST00000413037.1@TP53I3 ENST00000413037.1 protein_coding 24084189,24082885,24080746 24084311,24083152,24081031 Gene ID= ENSG00000115129.13 TPM= 3.62 Transcript Type= protein_coding chr2 24202866 24360755 24202866 24360755 - transcript404.chr2.nnic@ITSN2 transcript404.chr2.nnic protein_coding 24360304,24328052,24315132,24313460,24312212,24310489,24310284,24308617,24303799,24301965,24301154,24299909,24298665,24295664,24293688,24286212,24275713,24271805,24270671,24261561,24261106,24257888,24254367,24252345,24248837,24248629,24246797,24246129,24220945,24217907,24216049,24212650,24210780,24209818,24209100,24208237,24205214,24204245,24202866 24360755,24328115,24315224,24313523,24312375,24310692,24310380,24308756,24303862,24302102,24301239,24300171,24298814,24295804,24293775,24286351,24275849,24271941,24270768,24261742,24261250,24258093,24254431,24252511,24248882,24248750,24246893,24246320,24221066,24218013,24216232,24212748,24210947,24210033,24209221,24208319,24205297,24204418,24203783 Gene ID= ENSG00000198399.14 TPM= 4.53 Transcript Type= NA chr2 24490996 24770500 24490996 24770500 + transcript437.chr2.nnic@NCOA1 transcript437.chr2.nnic protein_coding 24490996,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221 24491602,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24770500 Gene ID= ENSG00000084676.15 TPM= 24.15 Transcript Type= NA chr2 24491752 24770500 24491752 24770500 + transcript440.chr2.nic@NCOA1 transcript440.chr2.nic protein_coding 24491752,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221 24492188,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24770500 Gene ID= ENSG00000084676.15 TPM= 4.83 Transcript Type= NA chr2 24491055 24769391 24491055 24769391 + transcript441.chr2.nnic@NCOA1 transcript441.chr2.nnic protein_coding 24491055,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768221 24491602,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24769391 Gene ID= ENSG00000084676.15 TPM= 13.28 Transcript Type= NA chr2 24491255 24769835 24491255 24769835 + transcript442.chr2.nnic@NCOA1 transcript442.chr2.nnic protein_coding 24491255,24564295,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24739432,24741784,24751982,24757973,24762687,24768079,24768221 24491602,24564430,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24739533,24742186,24752156,24758156,24762776,24768135,24769835 Gene ID= ENSG00000084676.15 TPM= 2.42 Transcript Type= NA chr2 24491242 24770500 24491242 24770500 + transcript443.chr2.nnic@NCOA1 transcript443.chr2.nnic protein_coding 24491242,24564295,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221 24491602,24564430,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24770500 Gene ID= ENSG00000084676.15 TPM= 3.02 Transcript Type= NA chr2 24491248 24770590 24491248 24770590 + transcript444.chr2.nnic@NCOA1 transcript444.chr2.nnic protein_coding 24491248,24584476,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221 24491602,24584560,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24770590 Gene ID= ENSG00000084676.15 TPM= 3.92 Transcript Type= NA chr2 24491251 24768517 24491251 24768517 + transcript447.chr2.nnic@NCOA1 transcript447.chr2.nnic protein_coding 24491251,24564295,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768221 24491602,24564430,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768517 Gene ID= ENSG00000084676.15 TPM= 4.83 Transcript Type= NA chr2 24491248 24770500 24491248 24770500 + transcript449.chr2.nnic@NCOA1 transcript449.chr2.nnic protein_coding 24491248,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768079,24768221 24491602,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768135,24770500 Gene ID= ENSG00000084676.15 TPM= 4.83 Transcript Type= NA chr2 24491248 24768516 24491248 24768516 + transcript452.chr2.nnic@NCOA1 transcript452.chr2.nnic protein_coding 24491248,24643966,24658661,24665749,24673366,24682951,24691481,24693252,24697658,24705086,24706568,24710931,24726589,24728308,24729501,24739432,24741784,24751982,24757973,24762687,24768221 24491602,24644122,24658766,24665915,24673463,24683128,24691660,24693347,24697798,24705233,24707888,24711111,24726706,24728476,24729815,24739533,24742186,24752156,24758156,24762776,24768516 Gene ID= ENSG00000084676.15 TPM= 3.92 Transcript Type= NA chr2 24789734 24793382 24789734 24793382 - ENST00000328379.5@PTRHD1 ENST00000328379.5 protein_coding 24793126,24789734 24793382,24790581 Gene ID= ENSG00000184924.5 TPM= 106.85 Transcript Type= protein_coding chr2 24793113 24822379 24793113 24822379 + transcript464.chr2.nic@CENPO transcript464.chr2.nic protein_coding 24793113,24793306,24793852,24799675,24814376,24815497,24816646,24817670,24819354 24793164,24793501,24793965,24799844,24814493,24815756,24816817,24817841,24822379 Gene ID= ENSG00000138092.10 TPM= 2.72 Transcript Type= NA chr2 24793145 24822376 24793145 24822376 + ENST00000380834.6@CENPO ENST00000380834.6 protein_coding 24793145,24793852,24799675,24814376,24815497,24816646,24817670,24819354 24793501,24793965,24799844,24814493,24815756,24816817,24817841,24822376 Gene ID= ENSG00000138092.10 TPM= 2.72 Transcript Type= protein_coding chr2 24793145 24822376 24793145 24822376 + ENST00000473706.5@CENPO ENST00000473706.5 protein_coding 24793145,24799675,24814376,24815497,24816646,24817670,24819354 24793501,24799844,24814493,24815756,24816817,24817841,24822376 Gene ID= ENSG00000138092.10 TPM= 3.62 Transcript Type= protein_coding chr2 24819172 24920272 24819172 24920272 - transcript457.chr2.nic@ADCY3 transcript457.chr2.nic protein_coding 24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24820384,24819172 24920272,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820451,24820114 Gene ID= ENSG00000138031.14 TPM= 5.59 Transcript Type= NA chr2 24819172 24920212 24819172 24920212 - transcript458.chr2.nic@ADCY3 transcript458.chr2.nic protein_coding 24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838847,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819172 24920212,24919184,24872719,24842384,24841667,24841386,24840031,24838912,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114 Gene ID= ENSG00000138031.14 TPM= 3.69 Transcript Type= NA chr2 24819172 24920624 24819172 24920624 - transcript459.chr2.nic@ADCY3 transcript459.chr2.nic protein_coding 24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819172 24920624,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828023,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114 Gene ID= ENSG00000138031.14 TPM= 5.81 Transcript Type= NA chr2 24819172 24920245 24819172 24920245 - transcript461.chr2.nic@ADCY3 transcript461.chr2.nic protein_coding 24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819172 24920245,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114 Gene ID= ENSG00000138031.14 TPM= 41.73 Transcript Type= NA chr2 24819172 24920212 24819172 24920212 - transcript462.chr2.nnic@ADCY3 transcript462.chr2.nnic protein_coding 24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24820724,24819172 24920212,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834993,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848,24820114 Gene ID= ENSG00000138031.14 TPM= 3.69 Transcript Type= NA chr2 24819172 24920212 24819172 24920212 - transcript463.chr2.nic@ADCY3 transcript463.chr2.nic protein_coding 24919683,24918313,24872570,24842254,24841556,24841259,24839873,24838445,24836917,24834794,24834485,24831662,24830709,24827902,24827546,24826045,24824378,24823209,24822511,24821517,24819172 24920212,24919184,24872719,24842384,24841667,24841386,24840031,24838622,24837045,24834936,24834646,24831749,24830825,24828161,24827608,24826126,24824536,24823355,24822630,24821640,24820848 Gene ID= ENSG00000138031.14 TPM= 4.68 Transcript Type= NA chr2 24943636 24972094 24943636 24972094 - ENST00000264711.6@DNAJC27 ENST00000264711.6 protein_coding 24971818,24967211,24963405,24957810,24957043,24951394,24943636 24972094,24967293,24963474,24957974,24957165,24951554,24947748 Gene ID= ENSG00000115137.11 TPM= 7.24 Transcript Type= protein_coding chr2 24972183 24972830 24972183 24972830 + ENST00000421842.1@DNAJC27-AS1 ENST00000421842.1 antisense_RNA 24972183,24972626 24972232,24972830 Gene ID= ENSG00000224165.5 TPM= 3.62 Transcript Type= antisense_RNA chr2 25233000 25252162 25233000 25252162 - transcript478.chr2.nic@DNMT3A transcript478.chr2.nic protein_coding 25251912,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25233000 25252162,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420 Gene ID= ENSG00000119772.16 TPM= 4.98 Transcript Type= NA chr2 25281451 25341963 25281451 25341963 - transcript485.chr2.nic@DNMT3A transcript485.chr2.nic protein_coding 25341826,25313913,25300139,25281451 25341963,25314161,25300243,25282711 Gene ID= ENSG00000119772.16 TPM= 3.62 Transcript Type= NA chr2 25232976 25341885 25232976 25341885 - ENST00000321117.9@DNMT3A ENST00000321117.9 protein_coding 25341826,25313913,25300139,25282441,25275500,25274941,25248037,25247591,25247051,25246620,25246160,25246020,25245253,25244540,25244155,25243898,25241562,25240640,25240302,25239130,25236936,25235707,25232976 25341885,25314161,25300243,25282711,25275543,25275087,25248252,25247749,25247158,25246776,25246309,25246064,25245332,25244652,25244338,25243982,25241707,25240730,25240450,25239215,25237005,25235825,25234420 Gene ID= ENSG00000119772.16 TPM= 4.98 Transcript Type= protein_coding chr2 25377245 25673647 25377245 25673647 - ENST00000288642.12@DTNB ENST00000288642.12 protein_coding 25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25388202,25387289,25383836,25379290,25377245 25673647,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25388361,25387378,25383889,25379323,25377553 Gene ID= ENSG00000138101.18 TPM= 1.81 Transcript Type= protein_coding chr2 25377243 25673634 25377243 25673634 - ENST00000407661.7@DTNB ENST00000407661.7 protein_coding 25673386,25652594,25639014,25628171,25607236,25596086,25580721,25576838,25531473,25482796,25455405,25451548,25433910,25432886,25427535,25419515,25388202,25387289,25379290,25377243 25673634,25652661,25639094,25628384,25607321,25596240,25580826,25577004,25531597,25482873,25455494,25451635,25433995,25432999,25427631,25419535,25388361,25387378,25379323,25377553 Gene ID= ENSG00000138101.18 TPM= 4.53 Transcript Type= protein_coding chr2 25926596 25982497 25926596 25982497 - ENST00000264712.7@KIF3C ENST00000264712.7 protein_coding 25980373,25956343,25955541,25954267,25951789,25929955,25929305,25926596 25982497,25956444,25955663,25954385,25951905,25930063,25929477,25929071 Gene ID= ENSG00000084731.14 TPM= 12.68 Transcript Type= protein_coding chr2 26034110 26137454 26034110 26137454 + ENST00000264710.4@RAB10 ENST00000264710.4 protein_coding 26034110,26098662,26109768,26127144,26127850,26134938 26034735,26098722,26109906,26127233,26127951,26137454 Gene ID= ENSG00000084733.10 TPM= 248.12 Transcript Type= protein_coding chr2 26173091 26189663 26173091 26189663 + ENST00000401533.6@GAREM2 ENST00000401533.6 protein_coding 26173091,26176344,26182967,26184233,26186189,26187231 26173332,26176484,26183097,26185276,26186358,26189663 Gene ID= ENSG00000157833.12 TPM= 4.53 Transcript Type= protein_coding chr2 26190635 26244726 26190635 26244726 - ENST00000380649.7@HADHA ENST00000380649.7 protein_coding 26244530,26239102,26238934,26236855,26234217,26232160,26230192,26215053,26214443,26212570,26209780,26204062,26201149,26197691,26195092,26194570,26193577,26192310,26191483,26190635 26244726,26239143,26239004,26236988,26234355,26232279,26230294,26215175,26214561,26212626,26209889,26204196,26201320,26197777,26195232,26194638,26193772,26192424,26191628,26191395 Gene ID= ENSG00000084754.10 TPM= 708.14 Transcript Type= protein_coding chr2 26244895 26290468 26244895 26290468 + ENST00000317799.9@HADHB ENST00000317799.9 protein_coding 26244895,26254247,26254430,26263380,26269953,26273651,26277073,26278614,26279135,26279994,26282845,26283004,26284117,26284883,26285407,26289918 26244990,26254318,26254474,26263479,26269997,26273750,26277160,26278801,26279315,26280115,26282924,26283051,26284204,26284957,26285571,26290468 Gene ID= ENSG00000138029.13 TPM= 861.87 Transcript Type= protein_coding chr2 26244926 26290412 26244926 26290412 + ENST00000405867.7@HADHB ENST00000405867.7 protein_coding 26244926,26254247,26254430,26263380,26269953,26273651,26277073,26279994,26282845,26283004,26284117,26284883,26285407,26289918 26244990,26254318,26254474,26263479,26269997,26273750,26277160,26280115,26282924,26283051,26284204,26284957,26285571,26290412 Gene ID= ENSG00000138029.13 TPM= 5.28 Transcript Type= protein_coding chr2 26457204 26483707 26457204 26483707 - transcript541.chr2.nic@OTOF transcript541.chr2.nic protein_coding 26483462,26482406,26480786,26480203,26479473,26479264,26477649,26477416,26477172,26476891,26476128,26475914,26475359,26474513,26473991,26473406,26473132,26472519,26471121,26470593,26468408,26467365,26467099,26466714,26465949,26465672,26464869,26463964,26463483,26462083,26461696,26460852,26460647,26457204 26483707,26482592,26481009,26480311,26479653,26479384,26477749,26477506,26477288,26477043,26476317,26476038,26475493,26474674,26474110,26473567,26473294,26472589,26471150,26470721,26468474,26467501,26467233,26466851,26466076,26465842,26465029,26464106,26463571,26462181,26461937,26461030,26460747,26458220 Gene ID= ENSG00000115155.16 TPM= 3.62 Transcript Type= NA chr2 26457204 26470843 26457204 26470843 - transcript545.chr2.nnic@OTOF transcript545.chr2.nnic protein_coding 26470593,26468408,26467365,26467099,26466714,26465949,26465672,26464869,26463964,26463651,26463483,26462083,26461696,26460852,26460647,26457204 26470843,26468474,26467501,26467233,26466851,26466076,26465842,26465029,26464106,26463737,26463571,26462181,26461937,26461030,26460747,26458220 Gene ID= ENSG00000115155.16 TPM= 1.81 Transcript Type= NA chr2 26578955 26605573 26578955 26605573 - transcript548.chr2.nnic@CIB4 transcript548.chr2.nnic protein_coding 26605502,26583789,26582825,26578955 26605573,26583898,26582913,26581393 Gene ID= ENSG00000157884.10 TPM= 2.72 Transcript Type= NA chr2 26596204 26605562 26596204 26605562 - transcript550.chr2.nnic@CIB4 transcript550.chr2.nnic protein_coding 26605502,26603859,26596204 26605562,26603999,26596744 Gene ID= ENSG00000157884.10 TPM= 1.81 Transcript Type= NA chr2 26581207 26605563 26581207 26605563 - ENST00000403670.7@CIB4 ENST00000403670.7 protein_coding 26605502,26595176,26583789,26582825,26581207 26605563,26595317,26583898,26582913,26581393 Gene ID= ENSG00000157884.10 TPM= 2.72 Transcript Type= processed_transcript chr2 26692705 26731198 26692705 26731198 + transcript565.chr2.nnic@KCNK3 transcript565.chr2.nnic protein_coding 26692705,26727667,26729914 26693158,26728932,26731198 Gene ID= ENSG00000171303.6 TPM= 41.05 Transcript Type= NA chr2 26692722 26731195 26692722 26731195 + transcript572.chr2.nnic@KCNK3 transcript572.chr2.nnic protein_coding 26692722,26727476,26727667 26693158,26727568,26731195 Gene ID= ENSG00000171303.6 TPM= 3.92 Transcript Type= NA chr2 26692751 26733420 26692751 26733420 + ENST00000302909.3@KCNK3 ENST00000302909.3 protein_coding 26692751,26727667 26693158,26733420 Gene ID= ENSG00000171303.6 TPM= 2628.8 Transcript Type= protein_coding chr2 26764288 26781231 26764288 26781231 + ENST00000344420.9@SLC35F6 ENST00000344420.9 protein_coding 26764288,26774251,26775044,26775464,26776372,26778042 26764426,26774323,26775215,26775676,26776482,26781231 Gene ID= ENSG00000213699.8 TPM= 69.73 Transcript Type= protein_coding chr2 26970612 27027196 26970612 27027196 + ENST00000233121.6@MAPRE3 ENST00000233121.6 protein_coding 26970612,27022212,27023332,27024096,27025583,27025880,27026280 26970802,27022339,27023477,27024297,27025737,27026032,27027196 Gene ID= ENSG00000084764.10 TPM= 13.13 Transcript Type= protein_coding chr2 26970614 27027197 26970614 27027197 + transcript587.chr2.nic@MAPRE3 transcript587.chr2.nic protein_coding 26970614,27022212,27023332,27025583,27025880,27026280 26970802,27022339,27024297,27025737,27026032,27027197 Gene ID= ENSG00000084764.10 TPM= 4.98 Transcript Type= NA chr2 26970614 27027197 26970614 27027197 + transcript588.chr2.nic@MAPRE3 transcript588.chr2.nic protein_coding 26970614,27022212,27023332,27025880,27026280 26970802,27022339,27025737,27026032,27027197 Gene ID= ENSG00000084764.10 TPM= 7.24 Transcript Type= NA chr2 26970658 27027196 26970658 27027196 + ENST00000405074.7@MAPRE3 ENST00000405074.7 protein_coding 26970658,27022212,27023332,27024096,27025583,27025880,27026280 26970802,27022339,27023477,27024252,27025737,27026032,27027196 Gene ID= ENSG00000084764.10 TPM= 8.15 Transcript Type= protein_coding chr2 27032970 27041695 27032970 27041695 + transcript597.chr2.nic@TMEM214 transcript597.chr2.nic protein_coding 27032970,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27040030,27040345,27040711 27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27040198,27040496,27041695 Gene ID= ENSG00000119777.18 TPM= 4.35 Transcript Type= NA chr2 27032954 27041695 27032954 27041695 + ENST00000238788.13@TMEM214 ENST00000238788.13 protein_coding 27032954,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711 27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041695 Gene ID= ENSG00000119777.18 TPM= 129.16 Transcript Type= protein_coding chr2 27032954 27041694 27032954 27041694 + ENST00000321326.11@TMEM214 ENST00000321326.11 protein_coding 27032954,27034067,27035135,27035594,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711,27041244 27033166,27034266,27035285,27035728,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27040954,27041694 Gene ID= ENSG00000119777.18 TPM= 1.2 Transcript Type= nonsense_mediated_decay chr2 27032977 27041693 27032977 27041693 + ENST00000404032.7@TMEM214 ENST00000404032.7 protein_coding 27032977,27034067,27035135,27035970,27036487,27036705,27037077,27037561,27038146,27038484,27038702,27039047,27039741,27040030,27040345,27040711 27033166,27034266,27035285,27036052,27036592,27036786,27037178,27037702,27038237,27038532,27038815,27039164,27039837,27040198,27040496,27041693 Gene ID= ENSG00000119777.18 TPM= 7.81 Transcript Type= protein_coding chr2 27051646 27070622 27051646 27070622 + ENST00000487078.5@AGBL5 ENST00000487078.5 protein_coding 27051646,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190,27067494,27068632,27069048,27069573,27070092 27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059404,27067646,27068744,27069094,27069706,27070622 Gene ID= ENSG00000084693.15 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr2 27051678 27059535 27051678 27059535 + ENST00000323064.12@AGBL5 ENST00000323064.12 protein_coding 27051678,27052913,27053402,27053896,27054630,27055075,27055682,27056623,27057303,27058400,27059190 27051793,27053173,27053573,27054059,27054807,27055253,27056138,27056792,27057438,27058602,27059535 Gene ID= ENSG00000084693.15 TPM= 46.18 Transcript Type= protein_coding chr2 27070487 27071649 27070487 27071649 - ENST00000429985.1@OST4 ENST00000429985.1 protein_coding 27071326,27070487 27071649,27070721 Gene ID= ENSG00000228474.5 TPM= 11.77 Transcript Type= protein_coding chr2 27078567 27086408 27078567 27086408 + ENST00000380320.8@EMILIN1 ENST00000380320.8 protein_coding 27078567,27080151,27080732,27082083,27084415,27084991,27085160,27085678 27079235,27080270,27080952,27084011,27084531,27085008,27085297,27086408 Gene ID= ENSG00000138080.13 TPM= 246.31 Transcript Type= protein_coding chr2 27086733 27100721 27086733 27100721 + transcript622.chr2.nic@KHK transcript622.chr2.nic protein_coding 27086733,27092332,27094477,27094800,27096729,27097503,27099196,27099420,27099665 27087351,27092448,27094611,27094934,27096801,27097649,27099284,27099577,27100721 Gene ID= ENSG00000138030.12 TPM= 2.72 Transcript Type= NA chr2 27086733 27099968 27086733 27099968 + transcript627.chr2.nnic@KHK transcript627.chr2.nnic protein_coding 27086733,27092332,27096729,27097503,27099196,27099420,27099665 27087351,27092448,27096801,27097649,27099284,27099577,27099968 Gene ID= ENSG00000138030.12 TPM= 3.62 Transcript Type= NA chr2 27086746 27099969 27086746 27099969 + transcript630.chr2.nnic@KHK transcript630.chr2.nnic protein_coding 27086746,27096729,27097503,27099196,27099420,27099665 27087351,27096801,27097649,27099284,27099577,27099969 Gene ID= ENSG00000138030.12 TPM= 1.81 Transcript Type= NA chr2 27086747 27100751 27086747 27100751 + ENST00000260599.10@KHK ENST00000260599.10 protein_coding 27086747,27092332,27094477,27096729,27097503,27099196,27099420,27099665 27087351,27092448,27094611,27096801,27097649,27099284,27099577,27100751 Gene ID= ENSG00000138030.12 TPM= 44.37 Transcript Type= protein_coding chr2 27130759 27134675 27130759 27134675 - transcript638.chr2.nic@PREB transcript638.chr2.nic protein_coding 27134287,27133117,27132843,27132603,27132230,27132010,27131672,27130759 27134675,27133721,27132923,27132727,27132403,27132082,27131831,27131508 Gene ID= ENSG00000138073.13 TPM= 6.57 Transcript Type= NA chr2 27130756 27134675 27130756 27134675 - ENST00000260643.6@PREB ENST00000260643.6 protein_coding 27134287,27133532,27133117,27132843,27132603,27132230,27132010,27131672,27130756 27134675,27133721,27133337,27132923,27132727,27132403,27132082,27131831,27131508 Gene ID= ENSG00000138073.13 TPM= 117.95 Transcript Type= protein_coding chr2 27130756 27134629 27130756 27134629 - ENST00000468045.5@PREB ENST00000468045.5 protein_coding 27133117,27132843,27132603,27132230,27131672,27130756 27134629,27132923,27132727,27132403,27132082,27131508 Gene ID= ENSG00000138073.13 TPM= 1.13 Transcript Type= retained_intron chr2 27199588 27211967 27199588 27211967 - transcript644.chr2.nic@SLC5A6 transcript644.chr2.nic protein_coding 27211900,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199588 27211967,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579 Gene ID= ENSG00000138074.14 TPM= 7.24 Transcript Type= NA chr2 27199588 27212304 27199588 27212304 - transcript651.chr2.nic@SLC5A6 transcript651.chr2.nic protein_coding 27212020,27211467,27207258,27206877,27206483,27206026,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199588 27212304,27211533,27207790,27206942,27206534,27206093,27205504,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579 Gene ID= ENSG00000138074.14 TPM= 2.72 Transcript Type= NA chr2 27199587 27212286 27199587 27212286 - ENST00000310574.7@SLC5A6 ENST00000310574.7 protein_coding 27212020,27211467,27207258,27206877,27206483,27206026,27205350,27204791,27204461,27203779,27203233,27202813,27201988,27201666,27201350,27200998,27199587 27212286,27211533,27207790,27206942,27206534,27206093,27205504,27204931,27204590,27203867,27203345,27202880,27202074,27201847,27201453,27201113,27200579 Gene ID= ENSG00000138074.14 TPM= 37.13 Transcript Type= protein_coding chr2 27212370 27217178 27212370 27217178 + ENST00000405489.7@ATRAID ENST00000405489.7 protein_coding 27212370,27213177,27215321,27215474,27215632,27216523,27216844 27212607,27213298,27215392,27215545,27215753,27216620,27217178 Gene ID= ENSG00000138085.16 TPM= 50.71 Transcript Type= protein_coding chr2 27254572 27263259 27254572 27263259 - ENST00000233535.8@SLC30A3 ENST00000233535.8 protein_coding 27262812,27258753,27258161,27257905,27257154,27256788,27256386,27254572 27263259,27258934,27258307,27258058,27257352,27256893,27256520,27255460 Gene ID= ENSG00000115194.10 TPM= 15.39 Transcript Type= protein_coding chr2 27282392 27307435 27282392 27307435 + ENST00000380075.6@TRIM54 ENST00000380075.6 protein_coding 27282392,27298567,27299245,27304959,27305584,27306080,27306213,27306456,27306887 27282899,27298739,27299416,27305054,27305817,27306102,27306337,27306542,27307435 Gene ID= ENSG00000138100.13 TPM= 10.87 Transcript Type= protein_coding chr2 27282462 27307439 27282462 27307439 + ENST00000296098.4@TRIM54 ENST00000296098.4 protein_coding 27282462,27298567,27299245,27299530,27304959,27305584,27306080,27306213,27306456,27306887 27282899,27298739,27299416,27299655,27305054,27305817,27306102,27306337,27306542,27307439 Gene ID= ENSG00000138100.13 TPM= 5.43 Transcript Type= protein_coding chr2 27309493 27323112 27309493 27323112 - transcript666.chr2.nnic@MPV17 transcript666.chr2.nnic protein_coding 27323052,27322448,27312994,27312680,27312481,27312214,27311899,27309493 27323112,27322522,27313109,27312772,27312589,27312246,27311951,27309981 Gene ID= ENSG00000115204.14 TPM= 3.08 Transcript Type= NA chr2 27309493 27323057 27309493 27323057 - transcript668.chr2.nnic@MPV17 transcript668.chr2.nnic protein_coding 27322990,27322448,27312994,27312680,27312494,27312214,27311899,27309493 27323057,27322522,27313109,27312772,27312589,27312246,27311951,27309981 Gene ID= ENSG00000115204.14 TPM= 16.21 Transcript Type= NA chr2 27309494 27323102 27309494 27323102 - ENST00000380044.5@MPV17 ENST00000380044.5 protein_coding 27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309494 27323102,27322522,27313109,27312772,27312589,27312246,27311951,27309981 Gene ID= ENSG00000115204.14 TPM= 89.56 Transcript Type= protein_coding chr2 27309540 27323083 27309540 27323083 - ENST00000426513.6@MPV17 ENST00000426513.6 protein_coding 27323052,27322448,27312994,27312680,27312494,27312214,27311899,27309540 27323083,27322522,27313074,27312772,27312589,27312246,27311951,27309981 Gene ID= ENSG00000115204.14 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr2 27325849 27357034 27325849 27357034 - ENST00000264720.7@GTF3C2 ENST00000264720.7 protein_coding 27356739,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328468,27328037,27327177,27325849 27357034,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27328189,27327284,27326893 Gene ID= ENSG00000115207.13 TPM= 24.45 Transcript Type= protein_coding chr2 27325856 27357026 27325856 27357026 - transcript682.chr2.nic@GTF3C2 transcript682.chr2.nic protein_coding 27356739,27343308,27342826,27341948,27337926,27337481,27337244,27336198,27335917,27335598,27333974,27333655,27329379,27329121,27328844,27328468,27328037,27327177,27325856 27357026,27343578,27343147,27342233,27338020,27337558,27337342,27336425,27336028,27335706,27333999,27333784,27329523,27329282,27328931,27328596,27328189,27327284,27326218 Gene ID= ENSG00000115207.13 TPM= 2.72 Transcript Type= NA chr2 27364354 27370468 27364354 27370468 - transcript711.chr2.nic@EIF2B4 transcript711.chr2.nic protein_coding 27370284,27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367074,27366759,27364718,27364354 27370468,27369919,27369549,27369209,27368733,27368463,27368139,27367822,27367559,27366936,27364898,27364599 Gene ID= ENSG00000115211.15 TPM= 5.73 Transcript Type= NA chr2 27364363 27370300 27364363 27370300 - ENST00000622434.4@EIF2B4 ENST00000622434.4 protein_coding 27370106,27369876,27369414,27369006,27368654,27368372,27368025,27367805,27367746,27367457,27367074,27366759,27364718,27364363 27370300,27369919,27369549,27369212,27368733,27368463,27368139,27367822,27367802,27367559,27367201,27366936,27364898,27364599 Gene ID= ENSG00000115211.15 TPM= 3.02 Transcript Type= protein_coding chr2 27364399 27370326 27364399 27370326 - ENST00000493344.6@EIF2B4 ENST00000493344.6 protein_coding 27369876,27369414,27369006,27368654,27368372,27368025,27367746,27367457,27367074,27366759,27364718,27364399 27370326,27369549,27369212,27368733,27368463,27368139,27367822,27367559,27367201,27366936,27364898,27364599 Gene ID= ENSG00000115211.15 TPM= 6.34 Transcript Type= protein_coding chr2 27370612 27377346 27370612 27377346 + transcript695.chr2.nic@SNX17 transcript695.chr2.nic protein_coding 27370612,27371269,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606 27370806,27371343,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377346 Gene ID= ENSG00000115234.10 TPM= 15.26 Transcript Type= NA chr2 27370522 27377128 27370522 27377128 + ENST00000233575.6@SNX17 ENST00000233575.6 protein_coding 27370522,27371269,27372623,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606 27370806,27371343,27372740,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377128 Gene ID= ENSG00000115234.10 TPM= 343.37 Transcript Type= protein_coding chr2 27370617 27377127 27370617 27377127 + ENST00000440760.5@SNX17 ENST00000440760.5 protein_coding 27370617,27371269,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606 27370806,27371468,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377127 Gene ID= ENSG00000115234.10 TPM= 2.58 Transcript Type= nonsense_mediated_decay chr2 27370628 27377123 27370628 27377123 + ENST00000427123.5@SNX17 ENST00000427123.5 protein_coding 27370628,27371269,27372623,27373040,27373247,27373861,27374085,27374346,27374689,27375061,27375506,27375846,27376106,27376313,27376479,27376606 27370806,27371343,27372740,27373113,27373311,27373971,27374175,27374433,27374758,27375153,27375709,27375971,27376183,27376387,27376520,27377123 Gene ID= ENSG00000115234.10 TPM= 1.39 Transcript Type= nonsense_mediated_decay chr2 27377237 27380780 27377237 27380780 - transcript719.chr2.nic@ZNF513 transcript719.chr2.nic protein_coding 27380472,27380093,27378884,27378467,27377237 27380780,27380248,27379054,27378615,27378371 Gene ID= ENSG00000163795.13 TPM= 4.23 Transcript Type= NA chr2 27377237 27380780 27377237 27380780 - transcript723.chr2.nnic@ZNF513 transcript723.chr2.nnic protein_coding 27380472,27380093,27378884,27378467,27377237 27380780,27380248,27379054,27378777,27378371 Gene ID= ENSG00000163795.13 TPM= 7.85 Transcript Type= NA chr2 27377241 27380780 27377241 27380780 - transcript726.chr2.nnic@ZNF513 transcript726.chr2.nnic protein_coding 27380472,27380093,27378467,27378195,27377241 27380780,27380248,27379054,27378371,27378030 Gene ID= ENSG00000163795.13 TPM= 2.26 Transcript Type= NA chr2 27377241 27380794 27377241 27380794 - transcript727.chr2.nnic@ZNF513 transcript727.chr2.nnic protein_coding 27380761,27380093,27378467,27378195,27377241 27380794,27380248,27379054,27378371,27378030 Gene ID= ENSG00000163795.13 TPM= 2.26 Transcript Type= NA chr2 27377237 27380794 27377237 27380794 - transcript731.chr2.nic@ZNF513 transcript731.chr2.nic protein_coding 27380761,27380093,27378467,27377237 27380794,27380248,27379054,27378371 Gene ID= ENSG00000163795.13 TPM= 3.32 Transcript Type= NA chr2 27377231 27380725 27377231 27380725 - ENST00000323703.10@ZNF513 ENST00000323703.10 protein_coding 27380472,27380093,27378467,27377231 27380725,27380248,27379054,27378371 Gene ID= ENSG00000163795.13 TPM= 29.58 Transcript Type= protein_coding chr2 27377235 27380444 27377235 27380444 - ENST00000407879.1@ZNF513 ENST00000407879.1 protein_coding 27380093,27378467,27377235 27380444,27379054,27378371 Gene ID= ENSG00000163795.13 TPM= 2.42 Transcript Type= protein_coding chr2 27381194 27409687 27381194 27409687 - ENST00000344034.4@PPM1G ENST00000344034.4 protein_coding 27409303,27387089,27386194,27385747,27384673,27383952,27383366,27382476,27382126,27381194 27409687,27387158,27386279,27385879,27385088,27384092,27383600,27382605,27382228,27381805 Gene ID= ENSG00000115241.10 TPM= 212.35 Transcript Type= protein_coding chr2 27428640 27442255 27428640 27442255 + ENST00000379852.7@NRBP1 ENST00000379852.7 protein_coding 27428640,27433254,27433673,27433989,27434471,27434722,27435133,27436753,27437047,27437262,27439766,27440403,27440652,27440805,27441127,27441267,27441567,27441708 27428731,27433483,27433795,27434090,27434560,27434762,27435227,27436836,27437105,27437360,27439898,27440508,27440702,27440940,27441180,27441330,27441622,27442255 Gene ID= ENSG00000115216.13 TPM= 20.83 Transcript Type= protein_coding chr2 27442381 27444297 27442381 27444297 + ENST00000288873.7@KRTCAP3 ENST00000288873.7 protein_coding 27442381,27442579,27442842,27443074,27443398,27443949,27444186 27442440,27442763,27442901,27443280,27443532,27444061,27444297 Gene ID= ENSG00000157992.12 TPM= 1.81 Transcript Type= protein_coding chr2 27442398 27444295 27442398 27444295 + ENST00000453171.5@KRTCAP3 ENST00000453171.5 protein_coding 27442398,27442842,27443074,27443398,27443949,27444189 27442440,27442901,27443280,27443532,27444061,27444295 Gene ID= ENSG00000157992.12 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr2 27444371 27489757 27444371 27489757 - ENST00000260570.7@IFT172 ENST00000260570.7 protein_coding 27489615,27485360,27485018,27484227,27483872,27483580,27483289,27481046,27480026,27479509,27477995,27477559,27477217,27476641,27472250,27470928,27465746,27465411,27463097,27462701,27461759,27461269,27461015,27459709,27459378,27458779,27458126,27457841,27457639,27456511,27454567,27454354,27453982,27453630,27453384,27449998,27449691,27449499,27449294,27448915,27447812,27447515,27446260,27445929,27445745,27445296,27445014,27444371 27489757,27485503,27485130,27484266,27483937,27483659,27483376,27481260,27480149,27479604,27478156,27477612,27477320,27476726,27472362,27471095,27465882,27465518,27463181,27462793,27461836,27461517,27461093,27459829,27459522,27458868,27458223,27457976,27457755,27456653,27454660,27454418,27454162,27453739,27453513,27450096,27449800,27449562,27449380,27449031,27447922,27447634,27446355,27445988,27445843,27445449,27445105,27444521 Gene ID= ENSG00000138002.14 TPM= 9.06 Transcript Type= protein_coding chr2 27491883 27495245 27491883 27495245 - ENST00000264703.3@FNDC4 ENST00000264703.3 protein_coding 27494878,27494547,27494351,27493930,27493389,27492666,27491883 27495245,27494703,27494466,27494134,27493478,27492790,27492478 Gene ID= ENSG00000115226.9 TPM= 277.55 Transcript Type= protein_coding chr2 27494401 27523687 27494401 27523687 + transcript754.chr2.nnic@GCKR transcript754.chr2.nnic protein_coding 27494401,27497244,27497562,27498255,27498724,27499142,27499397,27501135,27503514,27505718,27506481,27506788,27507235,27507681,27507977,27508168,27518788,27522460,27523269 27494428,27497399,27497630,27498323,27498797,27499208,27499450,27501229,27503619,27505836,27506579,27506885,27507311,27507777,27508074,27508251,27518937,27522594,27523687 Gene ID= ENSG00000084734.8 TPM= 1.81 Transcript Type= NA chr2 27496842 27523684 27496842 27523684 + ENST00000264717.6@GCKR ENST00000264717.6 protein_coding 27496842,27497244,27497562,27498255,27498724,27499142,27499397,27501135,27503514,27505718,27506481,27506788,27507235,27507681,27507977,27508168,27518788,27522460,27523269 27496964,27497399,27497630,27498323,27498797,27499208,27499450,27501229,27503619,27505836,27506579,27506885,27507311,27507777,27508074,27508251,27518937,27522594,27523684 Gene ID= ENSG00000084734.8 TPM= 1.81 Transcript Type= protein_coding chr2 27582969 27623215 27582969 27623215 + ENST00000556601.5@ZNF512 ENST00000556601.5 protein_coding 27582969,27598067,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153 27583142,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623215 Gene ID= ENSG00000243943.9 TPM= 18.11 Transcript Type= protein_coding chr2 27583030 27623094 27583030 27623094 + ENST00000379717.5@ZNF512 ENST00000379717.5 protein_coding 27583030,27583658,27598070,27599583,27599970,27600691,27601356,27602463,27603140,27607845,27615168,27616262,27617473,27621153 27583142,27583716,27598254,27599678,27600053,27600815,27601442,27602561,27603307,27608039,27615269,27616324,27617571,27623094 Gene ID= ENSG00000243943.9 TPM= 14.49 Transcript Type= protein_coding chr2 27625639 27629012 27625639 27629012 - ENST00000324364.3@CCDC121 ENST00000324364.3 protein_coding 27628950,27625639 27629012,27627917 Gene ID= ENSG00000176714.9 TPM= 3.62 Transcript Type= protein_coding chr2 27628996 27651508 27628996 27651508 + ENST00000264718.7@GPN1 ENST00000264718.7 protein_coding 27628996,27629859,27631027,27631834,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115 27629169,27629952,27631066,27631900,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27651508 Gene ID= ENSG00000198522.13 TPM= 46.64 Transcript Type= protein_coding chr2 27629024 27650849 27629024 27650849 + transcript784.chr2.nic@GPN1 transcript784.chr2.nic protein_coding 27629024,27629859,27632633,27634846,27635140,27638210,27638885,27640043,27641240,27642429,27647836,27650115 27629169,27629952,27632670,27634924,27635234,27638255,27639031,27640125,27641279,27642519,27647943,27650849 Gene ID= ENSG00000198522.13 TPM= 5.89 Transcript Type= NA chr2 27650812 27663809 27650812 27663809 - ENST00000337768.9@SUPT7L ENST00000337768.9 protein_coding 27663329,27662179,27660984,27657345,27655365,27650812 27663809,27662281,27661388,27657669,27655602,27653747 Gene ID= ENSG00000119760.15 TPM= 30.18 Transcript Type= protein_coding chr2 27653052 27663640 27653052 27663640 - ENST00000406540.5@SUPT7L ENST00000406540.5 protein_coding 27663329,27660984,27657345,27655365,27653052 27663640,27662281,27657669,27655602,27653747 Gene ID= ENSG00000119760.15 TPM= 6.18 Transcript Type= protein_coding chr2 27653063 27663639 27653063 27663639 - ENST00000405491.5@SUPT7L ENST00000405491.5 protein_coding 27663329,27662179,27660984,27657345,27655365,27653063 27663639,27662281,27661601,27657669,27655602,27653747 Gene ID= ENSG00000119760.15 TPM= 2.56 Transcript Type= protein_coding chr2 27771717 27779741 27771717 27779741 + ENST00000296102.7@MRPL33 ENST00000296102.7 protein_coding 27771717,27772674,27774424,27779433 27771799,27772692,27774530,27779741 Gene ID= ENSG00000243147.7 TPM= 356.56 Transcript Type= protein_coding chr2 27771717 27779734 27771717 27779734 + ENST00000379666.7@MRPL33 ENST00000379666.7 protein_coding 27771717,27772674,27779433 27771799,27772692,27779734 Gene ID= ENSG00000243147.7 TPM= 371.27 Transcript Type= protein_coding chr2 27771975 27779731 27771975 27779731 + ENST00000483992.5@MRPL33 ENST00000483992.5 protein_coding 27771975,27772674,27779433 27772385,27772692,27779731 Gene ID= ENSG00000243147.7 TPM= 35.32 Transcript Type= processed_transcript chr2 27781388 27890697 27781388 27890697 - transcript891.chr2.nnic@RBKS transcript891.chr2.nnic protein_coding 27890597,27858439,27848034,27847042,27843067,27832686,27827567,27781388 27890697,27858571,27848097,27847104,27843231,27832777,27827755,27781788 Gene ID= ENSG00000171174.13 TPM= 3.62 Transcript Type= NA chr2 27808315 27890488 27808315 27890488 - transcript894.chr2.nic@RBKS transcript894.chr2.nic protein_coding 27890257,27858439,27848034,27847042,27843067,27832686,27827567,27808315 27890488,27858571,27848097,27847104,27843231,27832777,27827755,27810045 Gene ID= ENSG00000171174.13 TPM= 6.34 Transcript Type= NA chr2 27781486 27890488 27781486 27890488 - transcript899.chr2.nnic@RBKS transcript899.chr2.nnic protein_coding 27890257,27858439,27847042,27843067,27832686,27827567,27781486 27890488,27858571,27847104,27843231,27832777,27827755,27781788 Gene ID= ENSG00000171174.13 TPM= 7.24 Transcript Type= NA chr2 27890729 28338901 27890729 28338901 + ENST00000344773.6@BABAM2 ENST00000344773.6 protein_coding 27890729,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28327274,28338450 27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28327447,28338901 Gene ID= ENSG00000158019.20 TPM= 20.41 Transcript Type= protein_coding chr2 27978173 28339184 27978173 28339184 + transcript859.chr2.nnic@BABAM2 transcript859.chr2.nnic protein_coding 27978173,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28310082,28338450 27978374,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28310153,28339184 Gene ID= ENSG00000158019.20 TPM= 43.99 Transcript Type= NA chr2 27978193 28338899 27978193 28338899 + transcript864.chr2.nnic@BABAM2 transcript864.chr2.nnic protein_coding 27978193,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28327274,28338450 27978374,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28327447,28338899 Gene ID= ENSG00000158019.20 TPM= 78.55 Transcript Type= NA chr2 27978097 28339190 27978097 28339190 + transcript875.chr2.nnic@BABAM2 transcript875.chr2.nnic protein_coding 27978097,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450 27978374,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28339190 Gene ID= ENSG00000158019.20 TPM= 208.54 Transcript Type= NA chr2 27890750 28338901 27890750 28338901 + ENST00000379624.5@BABAM2 ENST00000379624.5 protein_coding 27890750,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450 27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28338901 Gene ID= ENSG00000158019.20 TPM= 96.54 Transcript Type= protein_coding chr2 27890793 28338901 27890793 28338901 + ENST00000361704.6@BABAM2 ENST00000361704.6 protein_coding 27890793,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28310082,28338450 27890842,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28310153,28338901 Gene ID= ENSG00000158019.20 TPM= 11.13 Transcript Type= protein_coding chr2 27890792 28338901 27890792 28338901 + ENST00000342045.6@BABAM2 ENST00000342045.6 protein_coding 27890792,27892383,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28338450 27890842,27892448,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28338901 Gene ID= ENSG00000158019.20 TPM= 8.7 Transcript Type= protein_coding chr2 27890793 28338901 27890793 28338901 + ENST00000379632.6@BABAM2 ENST00000379632.6 protein_coding 27890793,27892383,27894533,27929832,27987993,28025226,28045725,28129271,28237202,28241323,28244780,28298338,28310082,28338450 27890842,27892448,27894684,27929908,27988087,28025420,28045799,28129380,28237301,28241393,28244862,28298491,28310153,28338901 Gene ID= ENSG00000158019.20 TPM= 2.07 Transcript Type= protein_coding chr2 28384409 28394672 28384409 28394672 - ENST00000427929.5@FLJ31356 ENST00000427929.5 antisense_RNA 28394548,28384409 28394672,28387133 Gene ID= ENSG00000229951.5 TPM= 2.72 Transcript Type= antisense_RNA chr2 28392858 28417312 28392858 28417312 + ENST00000264716.8@FOSL2 ENST00000264716.8 protein_coding 28392858,28404107,28408759,28411930 28393822,28404358,28408866,28417312 Gene ID= ENSG00000075426.11 TPM= 347.35 Transcript Type= protein_coding chr2 28751853 28802940 28751853 28802940 + ENST00000395366.2@PPP1CB ENST00000395366.2 protein_coding 28751853,28776851,28778809,28781738,28783907,28788658,28793863,28799199 28752176,28776982,28779039,28781842,28783978,28788809,28793997,28802940 Gene ID= ENSG00000213639.9 TPM= 109.12 Transcript Type= protein_coding chr2 28849821 28870301 28849821 28870301 - ENST00000306108.9@TRMT61B ENST00000306108.9 protein_coding 28869579,28865017,28861118,28852408,28851072,28850328,28849821 28870301,28865119,28861308,28852499,28851298,28850405,28850242 Gene ID= ENSG00000171103.10 TPM= 28.98 Transcript Type= protein_coding chr2 28849824 28870309 28849824 28870309 - transcript956.chr2.nic@TRMT61B transcript956.chr2.nic protein_coding 28869579,28865017,28861118,28852408,28851099,28850328,28849824 28870309,28865119,28861308,28852499,28851298,28850405,28850242 Gene ID= ENSG00000171103.10 TPM= 1.81 Transcript Type= NA chr2 28894643 28948222 28894643 28948222 + ENST00000407426.7@WDR43 ENST00000407426.7 protein_coding 28894643,28901987,28906460,28912590,28914069,28917893,28922919,28924982,28926468,28927569,28929579,28935521,28936922,28937931,28941461,28942312,28946450,28946600 28894923,28902124,28906581,28912710,28914208,28917995,28922983,28925153,28926554,28927700,28929710,28935607,28936953,28937994,28941574,28942381,28946499,28948222 Gene ID= ENSG00000163811.11 TPM= 16.3 Transcript Type= protein_coding chr2 28997507 29052228 28997507 29052228 + transcript969.chr2.nnic@TOGARAM2 transcript969.chr2.nnic protein_coding 28997507,28998143,28999181,29002536,29003492,29011455,29014395,29015601,29017154,29020959,29023086,29024139,29026853,29032934,29033469,29035464,29036541,29045324,29051756 28997666,28998253,28999468,29002747,29003682,29011501,29014561,29015677,29017304,29021056,29023191,29024374,29027122,29033051,29033563,29035656,29036757,29045410,29052228 Gene ID= ENSG00000189350.12 TPM= 2.72 Transcript Type= NA chr2 29115522 29174712 29115522 29174712 + transcript973.chr2.nic@CLIP4 transcript973.chr2.nic protein_coding 29115522,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373 29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174712 Gene ID= ENSG00000115295.19 TPM= 1.81 Transcript Type= NA chr2 29115426 29183813 29115426 29183813 + ENST00000320081.9@CLIP4 ENST00000320081.9 protein_coding 29115426,29121374,29131258,29132152,29133655,29135548,29143709,29145232,29152685,29156354,29157204,29160333,29163831,29167476,29174373,29181572 29115665,29121521,29131397,29132245,29133816,29135666,29143945,29145367,29152828,29156443,29157347,29160467,29163954,29167540,29174445,29183813 Gene ID= ENSG00000115295.19 TPM= 11.77 Transcript Type= protein_coding chr2 30146969 30160540 30146969 30160540 + transcript977.chr2.nnic@YPEL5 transcript977.chr2.nnic protein_coding 30146969,30155850,30156628,30158619 30147062,30155910,30156792,30160540 Gene ID= ENSG00000119801.12 TPM= 4.23 Transcript Type= NA chr2 30146961 30160533 30146961 30160533 + ENST00000261353.8@YPEL5 ENST00000261353.8 protein_coding 30146961,30156628,30158619 30147062,30156792,30160533 Gene ID= ENSG00000119801.12 TPM= 116.52 Transcript Type= protein_coding chr2 30146941 30160533 30146941 30160533 + ENST00000379519.7@YPEL5 ENST00000379519.7 protein_coding 30146941,30148245,30156628,30158619 30147062,30148541,30156792,30160533 Gene ID= ENSG00000119801.12 TPM= 6.95 Transcript Type= protein_coding chr2 30231531 30260028 30231531 30260028 + ENST00000395323.7@LBH ENST00000395323.7 protein_coding 30231531,30234405,30257433 30231764,30234507,30260028 Gene ID= ENSG00000213626.11 TPM= 22.64 Transcript Type= protein_coding chr2 30447236 30644224 30447236 30644224 + ENST00000379509.7@LCLAT1 ENST00000379509.7 protein_coding 30447236,30525587,30533116,30562146,30568060,30640117 30447383,30525755,30533314,30562292,30568176,30644224 Gene ID= ENSG00000172954.13 TPM= 9.96 Transcript Type= protein_coding chr2 30447257 30644225 30447257 30644225 + ENST00000309052.8@LCLAT1 ENST00000309052.8 protein_coding 30447257,30459552,30525587,30533116,30562146,30568060,30640117 30447404,30459722,30525755,30533314,30562292,30568176,30644225 Gene ID= ENSG00000172954.13 TPM= 5.43 Transcript Type= protein_coding chr2 30910467 31138726 30910467 31138726 - ENST00000349752.9@GALNT14 ENST00000349752.9 protein_coding 31137958,30992838,30966204,30958397,30955912,30955618,30945783,30944858,30942201,30932068,30929395,30924740,30924119,30912223,30910467 31138726,30993007,30966302,30958464,30955977,30955739,30945870,30944942,30942304,30932194,30929487,30924823,30924263,30912342,30911059 Gene ID= ENSG00000158089.14 TPM= 1.81 Transcript Type= protein_coding chr2 31867827 32010643 31867827 32010643 - transcript998.chr2.nnic@MEMO1 transcript998.chr2.nnic protein_coding 32010187,31943302,31932067,31920798,31917926,31883386,31869848,31867827 32010643,31943383,31932135,31920910,31918037,31883462,31869952,31868492 Gene ID= ENSG00000162959.13 TPM= 2.72 Transcript Type= NA chr2 31867823 32010974 31867823 32010974 - ENST00000404530.5@MEMO1 ENST00000404530.5 protein_coding 32010942,32010187,31943302,31932067,31920798,31917926,31891992,31883386,31869848,31867823 32010974,32010264,31943383,31932135,31920910,31918037,31892134,31883462,31869952,31868492 Gene ID= ENSG00000162959.13 TPM= 4.53 Transcript Type= protein_coding chr2 32011907 32039793 32011907 32039793 - ENST00000414013.5@DPY30 ENST00000414013.5 protein_coding 32039733,32039421,32039279,32029594,32023422,32011907 32039793,32039492,32039326,32029736,32023474,32012052 Gene ID= ENSG00000162961.13 TPM= 3.62 Transcript Type= processed_transcript chr2 32023892 32039812 32023892 32039812 - ENST00000342166.9@DPY30 ENST00000342166.9 protein_coding 32039733,32039421,32039279,32029594,32023892 32039812,32039492,32039326,32029736,32024256 Gene ID= ENSG00000162961.13 TPM= 45.28 Transcript Type= protein_coding chr2 32165846 32224099 32165846 32224099 + transcript1012.chr2.nic@SLC30A6 transcript1012.chr2.nic protein_coding 32165846,32171287,32174063,32175319,32184273,32192336,32192918,32193889,32197707,32204590,32206886,32209493,32220213 32165903,32171373,32174147,32175361,32184338,32192416,32192953,32193983,32197826,32204692,32206933,32209561,32224099 Gene ID= ENSG00000152683.14 TPM= 8.15 Transcript Type= NA chr2 32224454 32264880 32224454 32264880 - ENST00000402280.5@NLRC4 ENST00000402280.5 protein_coding 32264738,32256775,32252419,32249607,32241033,32238132,32236247,32235401,32224454 32264880,32256893,32252679,32251601,32241125,32238302,32236339,32235568,32224765 Gene ID= ENSG00000091106.18 TPM= 3.62 Transcript Type= protein_coding chr2 32357028 32618899 32357028 32618899 + ENST00000421745.6@BIRC6 ENST00000421745.6 protein_coding 32357028,32377588,32380153,32388750,32392039,32395511,32401163,32401463,32406499,32414769,32429146,32430865,32433644,32435496,32436053,32439508,32441329,32442065,32442324,32443491,32445521,32448795,32453808,32463194,32464509,32465065,32467525,32467903,32468437,32469395,32470168,32471014,32473112,32476213,32477368,32478635,32479462,32481320,32482429,32485643,32487647,32488588,32490041,32491425,32493540,32499547,32501713,32502795,32503042,32505005,32507980,32509738,32510526,32512933,32514990,32518254,32518817,32524888,32525464,32529651,32531355,32543241,32545643,32547850,32549313,32575156,32593915,32595034,32597751,32599739,32603006,32607455,32611448,32617725 32357486,32377769,32380290,32388943,32392150,32395593,32401385,32401623,32406557,32416163,32429295,32431090,32433804,32435585,32436184,32439686,32441462,32442226,32442455,32443588,32445668,32448928,32453942,32463381,32464823,32465164,32467739,32468111,32468783,32469614,32470301,32471124,32473239,32476344,32477583,32478818,32479617,32481453,32482582,32485759,32487801,32488714,32490151,32491558,32493667,32500109,32501888,32502891,32503236,32505205,32508259,32509994,32510634,32513154,32515770,32518397,32518946,32525019,32525628,32529824,32531551,32543541,32545860,32548014,32549481,32575366,32594060,32595144,32597968,32599900,32603083,32607643,32611582,32618899 Gene ID= ENSG00000115760.13 TPM= 7.24 Transcript Type= protein_coding chr2 32628062 32821051 32628062 32821051 + ENST00000317907.8@TTC27 ENST00000317907.8 protein_coding 32628062,32630523,32633876,32640270,32650131,32664303,32666635,32672272,32678856,32702807,32733828,32736694,32758292,32777882,32782626,32786984,32811024,32812504,32817457,32820816 32628380,32630700,32634005,32640410,32650233,32664467,32666768,32672384,32678922,32702920,32733923,32736816,32758519,32777980,32782678,32787149,32811221,32812615,32817557,32821051 Gene ID= ENSG00000018699.11 TPM= 38.03 Transcript Type= protein_coding chr2 33583658 33599362 33583658 33599362 - ENST00000238823.12@FAM98A ENST00000238823.12 protein_coding 33599169,33595489,33592080,33588335,33587240,33586562,33585530,33583658 33599362,33595637,33592214,33588519,33587320,33586678,33585697,33585444 Gene ID= ENSG00000119812.18 TPM= 39.84 Transcript Type= protein_coding chr2 36552294 36598142 36552294 36598142 - ENST00000405912.7@FEZ2 ENST00000405912.7 protein_coding 36597877,36590903,36583353,36581290,36578597,36558438,36555683,36552294 36598142,36591011,36583469,36581431,36578865,36558513,36555748,36553179 Gene ID= ENSG00000171055.14 TPM= 17.21 Transcript Type= protein_coding chr2 36552304 36598166 36552304 36598166 - ENST00000451623.5@FEZ2 ENST00000451623.5 protein_coding 36597877,36590903,36583353,36581290,36578597,36555683,36552304 36598166,36591011,36583469,36581431,36578865,36555748,36553179 Gene ID= ENSG00000171055.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr2 36980897 37084342 36980897 37084342 - ENST00000233099.5@HEATR5B ENST00000233099.5 protein_coding 37084269,37083289,37079120,37076911,37075485,37072110,37070230,37068681,37065755,37064740,37061939,37060581,37058888,37058451,37057317,37056440,37053502,37049653,37041133,37040329,37037855,37032629,37028681,37027923,37020655,37019809,37013841,37008611,37007050,37005632,37003542,37002306,37000586,36990648,36988646,36980897 37084342,37083436,37079331,37077019,37075634,37072281,37070387,37068930,37065910,37064990,37062050,37060733,37058987,37058560,37057480,37056615,37053607,37049843,37041292,37040518,37038024,37032773,37028920,37028174,37020836,37019877,37014020,37008848,37007304,37005759,37003686,37002572,37000813,36990799,36988859,36981794 Gene ID= ENSG00000008869.11 TPM= 6.34 Transcript Type= protein_coding chr2 37084451 37099244 37084451 37099244 + ENST00000409774.5@GPATCH11 ENST00000409774.5 protein_coding 37084451,37088369,37089640,37090681,37091916,37092165,37094082,37095437,37096208 37084570,37088440,37089866,37090722,37092036,37092255,37094195,37095518,37099244 Gene ID= ENSG00000152133.14 TPM= 11.77 Transcript Type= protein_coding chr2 37084518 37099244 37084518 37099244 + ENST00000281932.5@GPATCH11 ENST00000281932.5 protein_coding 37084518,37088369,37091916,37092165,37094082,37095437,37096208 37084570,37088440,37092036,37092255,37094195,37095518,37099244 Gene ID= ENSG00000152133.14 TPM= 1.81 Transcript Type= protein_coding chr2 37196508 37204739 37196508 37204739 + ENST00000392061.6@CEBPZOS ENST00000392061.6 protein_coding 37196508,37199704,37201048,37201642,37204304 37196520,37199819,37201092,37201726,37204739 Gene ID= ENSG00000218739.9 TPM= 19.92 Transcript Type= protein_coding chr2 37196488 37204741 37196488 37204741 + ENST00000402297.5@CEBPZOS ENST00000402297.5 protein_coding 37196488,37199704,37201048,37201642,37201863 37196520,37199819,37201092,37201726,37204741 Gene ID= ENSG00000218739.9 TPM= 70.63 Transcript Type= protein_coding chr2 37231635 37249158 37231635 37249158 + transcript1093.chr2.nic@NDUFAF7 transcript1093.chr2.nic protein_coding 37231635,37232106,37236096,37237757,37241578,37242635,37243863,37246052,37247456,37248135 37231760,37232266,37236176,37237867,37241637,37242693,37243973,37246195,37247629,37249158 Gene ID= ENSG00000003509.15 TPM= 3.4 Transcript Type= NA chr2 37231691 37249158 37231691 37249158 + transcript1098.chr2.nic@NDUFAF7 transcript1098.chr2.nic protein_coding 37231691,37232106,37236096,37237757,37241578,37243863,37246052,37247456,37248135 37231760,37232266,37236176,37237835,37241637,37243973,37246195,37247629,37249158 Gene ID= ENSG00000003509.15 TPM= 2.49 Transcript Type= NA chr2 37231635 37249158 37231635 37249158 + transcript1099.chr2.nic@NDUFAF7 transcript1099.chr2.nic protein_coding 37231635,37232106,37236096,37237757,37241578,37243863,37246052,37247456,37248135 37231760,37232266,37236176,37237867,37241637,37243973,37246195,37247629,37249158 Gene ID= ENSG00000003509.15 TPM= 11.55 Transcript Type= NA chr2 37231635 37249158 37231635 37249158 + transcript1102.chr2.nnic@NDUFAF7 transcript1102.chr2.nnic protein_coding 37231635,37232106,37236096,37237757,37241578,37243863,37246052,37247499,37248135 37231760,37232266,37236176,37237867,37242693,37243973,37246195,37247629,37249158 Gene ID= ENSG00000003509.15 TPM= 1.81 Transcript Type= NA chr2 37231666 37249160 37231666 37249160 + ENST00000002125.8@NDUFAF7 ENST00000002125.8 protein_coding 37231666,37232106,37236096,37237757,37241578,37242635,37243863,37246052,37247456,37248135 37231760,37232266,37236176,37237867,37241791,37242693,37243973,37246195,37247629,37249160 Gene ID= ENSG00000003509.15 TPM= 32.37 Transcript Type= protein_coding chr2 37250505 37324833 37250505 37324833 - transcript1084.chr2.nnic@PRKD3 transcript1084.chr2.nnic protein_coding 37324681,37317787,37316237,37293133,37290868,37289356,37286177,37282542,37279746,37277866,37275767,37274421,37272380,37269615,37267430,37260223,37259583,37256662,37254204,37250505 37324833,37317899,37317179,37293271,37290999,37289513,37286369,37282619,37279929,37277989,37275844,37274697,37272432,37269687,37267536,37260384,37259681,37256929,37254289,37253350 Gene ID= ENSG00000115825.9 TPM= 7.54 Transcript Type= NA chr2 37250505 37324833 37250505 37324833 - transcript1087.chr2.nnic@PRKD3 transcript1087.chr2.nnic protein_coding 37324681,37316237,37293133,37290868,37289356,37286177,37282542,37279746,37277866,37275767,37274421,37272380,37269615,37267430,37260223,37259583,37256662,37254204,37250505 37324833,37317179,37293271,37290999,37289513,37286369,37282619,37279929,37277989,37275844,37274697,37272432,37269687,37267536,37260384,37259681,37256929,37254289,37253350 Gene ID= ENSG00000115825.9 TPM= 31.99 Transcript Type= NA chr2 37250505 37324849 37250505 37324849 - transcript1088.chr2.nic@PRKD3 transcript1088.chr2.nic protein_coding 37324681,37293133,37290868,37289356,37286177,37282542,37279746,37277866,37275767,37274421,37272380,37269615,37267430,37260223,37259583,37256662,37254204,37250505 37324849,37293271,37290999,37289513,37286369,37282619,37279929,37277989,37275844,37274697,37272432,37269687,37267536,37260384,37259681,37256929,37254289,37253350 Gene ID= ENSG00000115825.9 TPM= 14.79 Transcript Type= NA chr2 37344574 37373322 37344574 37373322 + ENST00000338415.7@QPCT ENST00000338415.7 protein_coding 37344574,37352789,37359580,37367232,37369685,37372356,37372682 37344851,37352935,37359858,37367408,37369784,37372472,37373322 Gene ID= ENSG00000115828.15 TPM= 1494.15 Transcript Type= protein_coding chr2 37920809 38017741 37920809 38017741 + transcript1115.chr2.nnic@RMDN2 transcript1115.chr2.nnic protein_coding 37920809,37929262,37974040,37975212,37981283,37989541,37991220,37997416,38003991,38004136,38017186 37920953,37929729,37974214,37975314,37981343,37989616,37991297,37997514,38004044,38004216,38017741 Gene ID= ENSG00000115841.19 TPM= 12.68 Transcript Type= NA chr2 38067507 38076181 38067507 38076181 - ENST00000610745.4@CYP1B1 ENST00000610745.4 protein_coding 38075780,38074346,38067507 38076181,38075389,38071310 Gene ID= ENSG00000138061.11 TPM= 24.45 Transcript Type= protein_coding chr2 38293946 38377286 38293946 38377286 - transcript1121.chr2.nic@ATL2 transcript1121.chr2.nic protein_coding 38377143,38354067,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38293946 38377286,38354177,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113 Gene ID= ENSG00000119787.13 TPM= 1.81 Transcript Type= NA chr2 38294889 38376263 38294889 38376263 - transcript1122.chr2.nnic@ATL2 transcript1122.chr2.nnic protein_coding 38376116,38358443,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38294889 38376263,38358688,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113 Gene ID= ENSG00000119787.13 TPM= 1.81 Transcript Type= NA chr2 38294889 38376763 38294889 38376763 - transcript1125.chr2.nnic@ATL2 transcript1125.chr2.nnic protein_coding 38376723,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38294889 38376763,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113 Gene ID= ENSG00000119787.13 TPM= 1.81 Transcript Type= NA chr2 38294880 38377262 38294880 38377262 - ENST00000378954.8@ATL2 ENST00000378954.8 protein_coding 38377143,38343268,38318885,38318535,38315284,38314608,38313151,38310309,38309379,38300272,38299256,38298144,38294880 38377262,38343512,38319019,38318639,38315334,38314664,38313243,38310447,38309506,38300328,38299327,38298575,38296113 Gene ID= ENSG00000119787.13 TPM= 47.99 Transcript Type= protein_coding chr2 38481851 38482804 38481851 38482804 + ENST00000394878.2@RPLP0P6 ENST00000394878.2 processed_pseudogene 38481851 38482804 Gene ID= ENSG00000213553.4 TPM= 72.44 Transcript Type= processed_pseudogene chr2 38563185 38603060 38563185 38603060 - transcript1131.chr2.nic@HNRNPLL transcript1131.chr2.nic protein_coding 38602857,38602438,38591530,38585644,38583841,38582072,38581913,38577920,38577461,38573210,38569804,38569133,38568386,38568199,38563185 38603060,38602600,38591648,38585881,38583926,38582168,38581985,38578002,38577532,38573427,38569925,38569334,38568443,38568297,38564237 Gene ID= ENSG00000143889.15 TPM= 4.26 Transcript Type= NA chr2 38561971 38603028 38561971 38603028 - transcript1133.chr2.nic@HNRNPLL transcript1133.chr2.nic protein_coding 38602438,38591530,38585644,38583841,38582072,38581913,38577920,38577461,38573210,38569804,38569133,38568386,38568199,38561971 38603028,38591648,38585881,38583926,38582168,38581985,38578002,38577532,38573427,38569925,38569334,38568443,38568297,38564237 Gene ID= ENSG00000143889.15 TPM= 18.74 Transcript Type= NA chr2 38563509 38602897 38563509 38602897 - transcript1137.chr2.nnic@HNRNPLL transcript1137.chr2.nnic protein_coding 38602438,38591530,38585644,38583841,38582072,38581913,38577461,38573210,38569804,38569133,38568386,38568199,38566107,38563509 38602897,38591648,38585881,38583926,38582168,38581985,38577532,38573427,38569925,38569334,38568443,38568297,38566200,38564237 Gene ID= ENSG00000143889.15 TPM= 5.43 Transcript Type= NA chr2 38562559 38602928 38562559 38602928 - transcript1139.chr2.nnic@HNRNPLL transcript1139.chr2.nnic protein_coding 38602438,38585644,38583841,38582072,38581913,38577920,38577461,38573210,38569804,38569133,38568386,38568199,38562559 38602928,38585881,38583926,38582168,38581985,38578002,38577532,38573427,38569925,38569334,38568443,38568297,38564237 Gene ID= ENSG00000143889.15 TPM= 2.9 Transcript Type= NA chr2 38563185 38602906 38563185 38602906 - transcript1141.chr2.nnic@HNRNPLL transcript1141.chr2.nnic protein_coding 38602636,38591530,38585644,38583841,38582072,38581913,38577461,38573210,38569804,38569133,38568386,38568199,38563185 38602906,38591648,38585881,38583926,38582168,38581985,38577532,38573427,38569925,38569334,38568443,38568297,38564237 Gene ID= ENSG00000143889.15 TPM= 2.9 Transcript Type= NA chr2 38579105 38602896 38579105 38602896 - transcript1146.chr2.nic@HNRNPLL transcript1146.chr2.nic protein_coding 38602438,38591530,38585644,38583841,38582072,38579105 38602896,38591648,38585881,38583926,38582168,38581985 Gene ID= ENSG00000143889.15 TPM= 4.53 Transcript Type= NA chr2 38561978 38602966 38561978 38602966 - ENST00000449105.7@HNRNPLL ENST00000449105.7 protein_coding 38602438,38591530,38585644,38583841,38582072,38581913,38577461,38573210,38569804,38569133,38568386,38568199,38561978 38602966,38591648,38585881,38583926,38582168,38581985,38577532,38573427,38569925,38569334,38568443,38568297,38564237 Gene ID= ENSG00000143889.15 TPM= 52.7 Transcript Type= protein_coding chr2 38666096 38734768 38666096 38734768 + transcript1152.chr2.nic@GALM transcript1152.chr2.nic protein_coding 38666096,38675912,38681280,38689813,38698366,38729556,38731735,38733488 38666351,38676066,38681486,38689894,38698436,38729697,38731909,38734768 Gene ID= ENSG00000143891.16 TPM= 21.91 Transcript Type= NA chr2 38665910 38734768 38665910 38734768 + ENST00000272252.9@GALM ENST00000272252.9 protein_coding 38665910,38675912,38681280,38689813,38729556,38731735,38733488 38666351,38676066,38681486,38689894,38729697,38731909,38734768 Gene ID= ENSG00000143891.16 TPM= 864.68 Transcript Type= protein_coding chr2 38743601 38751415 38743601 38751415 - ENST00000425778.5@SRSF7 ENST00000425778.5 protein_coding 38751229,38750014,38749529,38748898,38748579,38748047,38746694,38746144,38743601 38751415,38750194,38749705,38749346,38748653,38748157,38746747,38746179,38745187 Gene ID= ENSG00000115875.18 TPM= 9.06 Transcript Type= nonsense_mediated_decay chr2 38744894 38751357 38744894 38751357 - transcript1166.chr2.nnic@SRSF7 transcript1166.chr2.nnic protein_coding 38751229,38750014,38749529,38749240,38748579,38748047,38746694,38746144,38744894 38751357,38750194,38749705,38749346,38748653,38748157,38746747,38746179,38745187 Gene ID= ENSG00000115875.18 TPM= 1.81 Transcript Type= NA chr2 38743599 38751494 38743599 38751494 - ENST00000313117.10@SRSF7 ENST00000313117.10 protein_coding 38751229,38750014,38749529,38748579,38748047,38746694,38746144,38743599 38751494,38750194,38749705,38748653,38748157,38746747,38746179,38745187 Gene ID= ENSG00000115875.18 TPM= 29.88 Transcript Type= protein_coding chr2 38743601 38751359 38743601 38751359 - transcript1169.chr2.nic@SRSF7 transcript1169.chr2.nic protein_coding 38751229,38750014,38749529,38748579,38748047,38746694,38746144,38743601 38751359,38750194,38749705,38749346,38748157,38746747,38746179,38745187 Gene ID= ENSG00000115875.18 TPM= 2.72 Transcript Type= NA chr2 38743599 38751494 38743599 38751494 - ENST00000446327.6@SRSF7 ENST00000446327.6 protein_coding 38751229,38750014,38749529,38748579,38748047,38746694,38743599 38751494,38750194,38749705,38748653,38748157,38746747,38745187 Gene ID= ENSG00000115875.18 TPM= 6.34 Transcript Type= protein_coding chr2 38744896 38751357 38744896 38751357 - transcript1173.chr2.nic@SRSF7 transcript1173.chr2.nic protein_coding 38751229,38750014,38748579,38748047,38746694,38744896 38751357,38750194,38749705,38748157,38746747,38745187 Gene ID= ENSG00000115875.18 TPM= 1.81 Transcript Type= NA chr2 38744918 38751352 38744918 38751352 - ENST00000443213.5@SRSF7 ENST00000443213.5 protein_coding 38751229,38750014,38748579,38748047,38746694,38746144,38744918 38751352,38750194,38749705,38748157,38746747,38746179,38745187 Gene ID= ENSG00000115875.18 TPM= 9.06 Transcript Type= nonsense_mediated_decay chr2 38778185 38785000 38778185 38785000 + ENST00000281950.7@GEMIN6 ENST00000281950.7 protein_coding 38778185,38778972,38781517 38778281,38779118,38785000 Gene ID= ENSG00000152147.10 TPM= 9.06 Transcript Type= protein_coding chr2 38778210 38781947 38778210 38781947 + ENST00000409566.1@GEMIN6 ENST00000409566.1 protein_coding 38778210,38778972,38779258,38781517 38778281,38779118,38779441,38781947 Gene ID= ENSG00000152147.10 TPM= 2.72 Transcript Type= protein_coding chr2 38797729 38875908 38797729 38875908 - ENST00000457308.5@DHX57 ENST00000457308.5 protein_coding 38875787,38868182,38863361,38862145,38860999,38858661,38856340,38855057,38854054,38848269,38847019,38843005,38837831,38828340,38826516,38825847,38822993,38819049,38818877,38815521,38813821,38806559,38802715,38797729 38875908,38868411,38863519,38862333,38861837,38858836,38856461,38855252,38854178,38848402,38847073,38843210,38837947,38828436,38826689,38826047,38823269,38819144,38818960,38815655,38813895,38806693,38802915,38798442 Gene ID= ENSG00000163214.20 TPM= 5.43 Transcript Type= protein_coding chr2 38875962 38882709 38875962 38882709 + ENST00000340556.10@MORN2 ENST00000340556.10 protein_coding 38875962,38880179,38880600,38881442,38882413 38876110,38880229,38880706,38881578,38882709 Gene ID= ENSG00000188010.12 TPM= 15.39 Transcript Type= protein_coding chr2 38960543 38975468 38960543 38975468 + transcript1187.chr2.nic@ARHGEF33 transcript1187.chr2.nic protein_coding 38960543,38966006,38973714 38960639,38966145,38975468 Gene ID= ENSG00000214694.10 TPM= 2.72 Transcript Type= NA chr2 38996480 39121060 38996480 39121060 - transcript1191.chr2.nic@SOS1 transcript1191.chr2.nic protein_coding 39120336,39067628,39058673,39056702,39054614,39051144,39035390,39035212,39024010,39022570,39014765,39013867,39013460,39012126,39010584,39007031,39006412,38997253,38996480 39121060,39067753,39058804,39056866,39054823,39051287,39035500,39035310,39024137,39023225,39014846,39013989,39013563,39012348,39010703,39007193,39006529,38997425,38997038 Gene ID= ENSG00000115904.12 TPM= 1.81 Transcript Type= NA chr2 39249267 39437284 39249267 39437284 - transcript1199.chr2.nnic@MAP4K3 transcript1199.chr2.nnic protein_coding 39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249267 39437284,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254545,39251885,39250705 Gene ID= ENSG00000011566.14 TPM= 1.81 Transcript Type= NA chr2 39249283 39437301 39249283 39437301 - ENST00000341681.9@MAP4K3 ENST00000341681.9 protein_coding 39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249283 39437301,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705 Gene ID= ENSG00000011566.14 TPM= 26.26 Transcript Type= protein_coding chr2 39249266 39437312 39249266 39437312 - ENST00000263881.7@MAP4K3 ENST00000263881.7 protein_coding 39436892,39378066,39356249,39343388,39337526,39336920,39333532,39331917,39326146,39325899,39325730,39325518,39315310,39309461,39307943,39299743,39293230,39292773,39290292,39288121,39286852,39282513,39280272,39278407,39272482,39272283,39267189,39265203,39260606,39258519,39258348,39254450,39251830,39249266 39437312,39378123,39356339,39343452,39337581,39336967,39333574,39331989,39326277,39325961,39325811,39325628,39315388,39309519,39308005,39299801,39293268,39292826,39290334,39288280,39286964,39282554,39280356,39278486,39272542,39272400,39267247,39265306,39260777,39258587,39258440,39254520,39251885,39250705 Gene ID= ENSG00000011566.14 TPM= 17.21 Transcript Type= protein_coding chr2 39735687 39779275 39735687 39779275 - transcript1219.chr2.nic@THUMPD2 transcript1219.chr2.nic protein_coding 39779114,39771505,39769710,39768901,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39735687 39779275,39771640,39770119,39769093,39768501,39766109,39761418,39757368,39755960,39755409,39744478,39737059 Gene ID= ENSG00000138050.14 TPM= 3.62 Transcript Type= NA chr2 39736305 39779267 39736305 39779267 - ENST00000505747.5@THUMPD2 ENST00000505747.5 protein_coding 39779114,39771505,39769710,39768424,39766057,39761331,39755889,39755295,39744370,39736305 39779267,39771640,39770119,39768501,39766109,39761418,39755960,39755409,39744478,39737059 Gene ID= ENSG00000138050.14 TPM= 6.34 Transcript Type= protein_coding chr2 39736307 39779267 39736307 39779267 - ENST00000378727.8@THUMPD2 ENST00000378727.8 protein_coding 39779114,39771505,39769710,39768424,39766057,39761331,39757248,39755889,39755295,39744370,39736307 39779267,39771640,39770119,39768501,39766109,39761418,39757368,39755960,39755409,39744478,39737059 Gene ID= ENSG00000138050.14 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr2 42048022 42058526 42048022 42058526 + transcript1233.chr2.nnic@PKDCC transcript1233.chr2.nnic protein_coding 42048022,42048337,42053239,42054036,42054941,42055286,42057221,42057603 42048149,42048838,42053361,42054307,42055020,42055393,42057394,42058526 Gene ID= ENSG00000162878.12 TPM= 1.81 Transcript Type= NA chr2 42048001 42058526 42048001 42058526 + transcript1239.chr2.nic@PKDCC transcript1239.chr2.nic protein_coding 42048001,42053239,42054036,42054941,42057256,42057603 42048838,42053361,42054307,42055020,42057394,42058526 Gene ID= ENSG00000162878.12 TPM= 3.62 Transcript Type= NA chr2 42048001 42058526 42048001 42058526 + transcript1240.chr2.nic@PKDCC transcript1240.chr2.nic protein_coding 42048001,42053239,42054036,42055286,42057221,42057603 42048838,42053361,42055020,42055393,42057394,42058526 Gene ID= ENSG00000162878.12 TPM= 6.34 Transcript Type= NA chr2 42048021 42058526 42048021 42058526 + transcript1241.chr2.nnic@PKDCC transcript1241.chr2.nnic protein_coding 42048021,42054036,42054941,42055286,42057221,42057603 42048838,42054307,42055020,42055393,42057394,42058526 Gene ID= ENSG00000162878.12 TPM= 4.53 Transcript Type= NA chr2 42048020 42058528 42048020 42058528 + ENST00000294964.5@PKDCC ENST00000294964.5 protein_coding 42048020,42053239,42054036,42054941,42055286,42057221,42057603 42048838,42053361,42054307,42055020,42055393,42057394,42058528 Gene ID= ENSG00000162878.12 TPM= 67.92 Transcript Type= protein_coding chr2 42169593 42332547 42169593 42332547 + transcript1246.chr2.nnic@EML4 transcript1246.chr2.nnic protein_coding 42169593,42237271,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286269,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326154,42328886,42329734 42169636,42237352,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42332547 Gene ID= ENSG00000143924.18 TPM= 2.72 Transcript Type= NA chr2 42169348 42332547 42169348 42332547 + transcript1249.chr2.nnic@EML4 transcript1249.chr2.nnic protein_coding 42169348,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286323,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326154,42328886,42329734 42169636,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42332547 Gene ID= ENSG00000143924.18 TPM= 2.72 Transcript Type= NA chr2 42169350 42332548 42169350 42332548 + ENST00000318522.9@EML4 ENST00000318522.9 protein_coding 42169350,42245505,42256501,42261121,42263178,42264706,42280850,42282823,42284634,42286269,42288227,42295125,42295381,42301241,42303104,42303315,42304484,42315962,42317427,42325467,42326154,42328886,42329734 42169636,42245687,42256630,42261294,42263306,42264731,42280973,42282972,42284703,42286379,42288322,42295259,42295516,42301392,42303229,42303446,42304551,42316050,42317524,42325554,42326252,42329016,42332548 Gene ID= ENSG00000143924.18 TPM= 36.22 Transcript Type= protein_coding chr2 42350507 42361216 42350507 42361216 - ENST00000234301.2@COX7A2L ENST00000234301.2 protein_coding 42361090,42353212,42350507 42361216,42353343,42351359 Gene ID= ENSG00000115944.14 TPM= 351.8 Transcript Type= protein_coding chr2 42442032 42493977 42442032 42493977 - ENST00000394973.4@KCNG3 ENST00000394973.4 protein_coding 42492870,42442032 42493977,42444579 Gene ID= ENSG00000171126.7 TPM= 1.81 Transcript Type= protein_coding chr2 42568510 42756946 42568510 42756946 + transcript1264.chr2.nic@MTA3 transcript1264.chr2.nic protein_coding 42568510,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707903,42708874,42718988,42722889,42753374 42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709096,42719074,42723035,42756946 Gene ID= ENSG00000057935.13 TPM= 5.89 Transcript Type= NA chr2 42494092 42709543 42494092 42709543 + transcript1268.chr2.nic@MTA3 transcript1268.chr2.nic protein_coding 42494092,42495163,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704194,42707903,42708874 42495006,42495254,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709543 Gene ID= ENSG00000057935.13 TPM= 7.24 Transcript Type= NA chr2 42568517 42709544 42568517 42709544 + ENST00000407270.7@MTA3 ENST00000407270.7 protein_coding 42568517,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704194,42707903,42708874 42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544 Gene ID= ENSG00000057935.13 TPM= 56.14 Transcript Type= protein_coding chr2 42568675 42709544 42568675 42709544 + ENST00000406911.5@MTA3 ENST00000406911.5 protein_coding 42568675,42570437,42579107,42609458,42640173,42644127,42656200,42659763,42682401,42695765,42697776,42704197,42707903,42708874 42568773,42570504,42579200,42609584,42640236,42644244,42656302,42659862,42682589,42695839,42697834,42704318,42708054,42709544 Gene ID= ENSG00000057935.13 TPM= 21.73 Transcript Type= protein_coding chr2 42767089 42792592 42767089 42792592 - ENST00000294973.10@HAAO ENST00000294973.10 protein_coding 42792457,42788529,42783784,42783314,42770493,42770143,42769713,42767860,42767595,42767089 42792592,42788607,42783867,42783420,42770582,42770186,42769858,42767928,42767677,42767515 Gene ID= ENSG00000162882.14 TPM= 13.58 Transcript Type= protein_coding chr2 43224010 43226606 43224010 43226606 - transcript1308.chr2.nnic@ZFP36L2 transcript1308.chr2.nnic protein_coding 43226265,43225960,43224010 43226606,43226162,43225752 Gene ID= ENSG00000152518.7 TPM= 1.81 Transcript Type= NA chr2 43222402 43226609 43222402 43226609 - ENST00000282388.3@ZFP36L2 ENST00000282388.3 protein_coding 43226265,43222402 43226609,43225752 Gene ID= ENSG00000152518.7 TPM= 1726.87 Transcript Type= protein_coding chr2 43484732 43596046 43484732 43596046 - transcript1314.chr2.nnic@THADA transcript1314.chr2.nnic protein_coding 43595931,43592317,43591952,43590824,43586854,43586702,43586401,43581741,43578513,43577022,43574336,43572814,43571707,43570388,43566698,43552204,43551789,43549210,43541159,43527879,43508648,43505622,43498833,43484732 43596046,43592416,43592046,43590954,43587002,43586734,43586449,43581928,43578607,43577242,43575027,43572992,43571862,43570510,43566821,43552339,43551925,43549368,43541316,43527988,43508780,43505735,43498955,43485325 Gene ID= ENSG00000115970.18 TPM= 1.81 Transcript Type= NA chr2 43552077 43596046 43552077 43596046 - transcript1316.chr2.nnic@THADA transcript1316.chr2.nnic protein_coding 43595931,43592317,43591952,43590824,43586854,43586702,43586401,43581741,43578513,43577022,43574336,43572814,43571707,43570388,43566698,43560234,43556345,43552077 43596046,43592416,43592046,43590954,43587002,43586734,43586449,43581928,43578607,43577122,43575027,43572992,43571862,43570510,43566821,43560385,43556555,43552339 Gene ID= ENSG00000115970.18 TPM= 1.81 Transcript Type= NA chr2 43552077 43596046 43552077 43596046 - transcript1317.chr2.nic@THADA transcript1317.chr2.nic protein_coding 43595931,43592317,43591952,43590824,43586854,43586702,43586401,43581741,43578513,43577022,43574336,43572814,43571707,43570388,43566698,43560234,43556345,43552077 43596046,43592416,43592046,43590954,43587002,43586734,43586449,43581928,43578607,43577242,43575027,43572992,43571862,43570510,43566821,43560385,43556555,43552339 Gene ID= ENSG00000115970.18 TPM= 2.72 Transcript Type= NA chr2 43774039 43810010 43774039 43810010 + ENST00000260605.12@DYNC2LI1 ENST00000260605.12 protein_coding 43774039,43776782,43783520,43787181,43789633,43794457,43795890,43796718,43800841,43801639,43804642,43805154,43809705 43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805246,43810010 Gene ID= ENSG00000138036.18 TPM= 16.3 Transcript Type= protein_coding chr2 43774041 43805794 43774041 43805794 + transcript1326.chr2.nic@DYNC2LI1 transcript1326.chr2.nic protein_coding 43774041,43776782,43783520,43787181,43789633,43794457,43795887,43796718,43800841,43801639,43804642,43805154 43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805794 Gene ID= ENSG00000138036.18 TPM= 4.07 Transcript Type= NA chr2 43774082 43809997 43774082 43809997 + ENST00000605786.5@DYNC2LI1 ENST00000605786.5 protein_coding 43774082,43776782,43783520,43787181,43789633,43794457,43795887,43796718,43800841,43801639,43804642,43805154,43809705 43774146,43776899,43783554,43787250,43789721,43794643,43795958,43796795,43800917,43801709,43804739,43805246,43809997 Gene ID= ENSG00000138036.18 TPM= 5.43 Transcript Type= protein_coding chr2 43886508 43996005 43886508 43996005 - ENST00000260665.11@LRPPRC ENST00000260665.11 protein_coding 43995799,43982238,43979826,43977155,43976994,43976143,43975091,43974614,43974150,43973795,43973607,43963588,43960541,43957385,43950573,43949602,43948412,43948122,43947731,43947257,43946113,43945332,43943687,43934754,43934190,43925893,43925067,43918256,43918025,43912432,43905692,43901320,43899466,43899219,43896634,43894545,43889734,43886508 43996005,43982434,43979948,43977276,43977052,43976229,43975217,43974758,43974295,43973900,43973714,43963706,43960634,43957451,43950600,43949659,43948518,43948199,43947775,43947370,43946243,43945417,43943894,43934878,43934296,43925961,43925157,43918398,43918133,43912558,43905780,43901524,43899605,43899334,43896708,43894629,43889876,43888656 Gene ID= ENSG00000138095.18 TPM= 173.86 Transcript Type= protein_coding chr2 44168876 44234072 44168876 44234072 + transcript1343.chr2.nnic@PPM1B transcript1343.chr2.nnic protein_coding 44168876,44194198,44201186,44209210,44217967,44218480,44232316 44169274,44194326,44202045,44209327,44218078,44218537,44234072 Gene ID= ENSG00000138032.20 TPM= 4.53 Transcript Type= NA chr2 44168877 44231472 44168877 44231472 + ENST00000282412.8@PPM1B ENST00000282412.8 protein_coding 44168877,44201186,44209210,44217967,44218480,44230413 44169274,44202045,44209327,44218078,44218537,44231472 Gene ID= ENSG00000138032.20 TPM= 28.98 Transcript Type= protein_coding chr2 44318766 44361494 44318766 44361494 - ENST00000409936.5@PREPL ENST00000409936.5 protein_coding 44361380,44359497,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318766 44361494,44360038,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445 Gene ID= ENSG00000138078.15 TPM= 2.94 Transcript Type= protein_coding chr2 44318763 44361561 44318763 44361561 - ENST00000409957.5@PREPL ENST00000409957.5 protein_coding 44361417,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763 44361561,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445 Gene ID= ENSG00000138078.15 TPM= 7.47 Transcript Type= protein_coding chr2 44317611 44361862 44317611 44361862 - ENST00000541738.5@PREPL ENST00000541738.5 protein_coding 44361524,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44317611 44361862,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445 Gene ID= ENSG00000138078.15 TPM= 10.19 Transcript Type= protein_coding chr2 44318763 44361546 44318763 44361546 - ENST00000409411.5@PREPL ENST00000409411.5 protein_coding 44361380,44346268,44344520,44343745,44342417,44339147,44338351,44332459,44328937,44326712,44323262,44322731,44321827,44318763 44361546,44346390,44344586,44343951,44342552,44339363,44338536,44332656,44329112,44326928,44323411,44322854,44321900,44321445 Gene ID= ENSG00000138078.15 TPM= 27.39 Transcript Type= protein_coding chr2 44361964 44772592 44361964 44772592 + ENST00000378494.7@CAMKMT ENST00000378494.7 protein_coding 44361964,44372716,44390241,44704283,44706287,44707399,44715287,44743622,44754055,44766430,44772036 44362145,44372888,44390305,44704343,44706341,44707462,44715353,44743696,44754118,44766561,44772592 Gene ID= ENSG00000143919.14 TPM= 6.34 Transcript Type= protein_coding chr2 45388680 45611281 45388680 45611281 - ENST00000263736.4@SRBD1 ENST00000263736.4 protein_coding 45611219,45605362,45601903,45599449,45585608,45581693,45579875,45574627,45573207,45562653,45553623,45551125,45547522,45546732,45488240,45476993,45419788,45418365,45413114,45392945,45388680 45611281,45605441,45602083,45599835,45585774,45581810,45580013,45574723,45573342,45562756,45553730,45551282,45547612,45546839,45488331,45477075,45419894,45418541,45413293,45393129,45389599 Gene ID= ENSG00000068784.12 TPM= 19.02 Transcript Type= protein_coding chr2 45651162 46086430 45651162 46086430 + transcript1368.chr2.nic@PRKCE transcript1368.chr2.nic protein_coding 45651162,45843000,45976429,45978976,45980296,45984551,46001404,46004542,46007462,46010344,46086208 45652448,45843063,45976588,45979010,45980381,45984680,46001546,46004638,46007661,46010517,46086430 Gene ID= ENSG00000171132.13 TPM= 1.81 Transcript Type= NA chr2 46297402 46386703 46297402 46386703 + ENST00000263734.4@EPAS1 ENST00000263734.4 protein_coding 46297402,46346873,46356151,46356724,46360638,46360885,46369827,46375690,46376539,46377894,46378657,46380227,46381596,46381975,46382425,46384509 46297937,46347063,46356302,46356808,46360756,46361090,46369933,46375837,46376753,46378087,46378767,46380717,46381722,46382089,46382598,46386703 Gene ID= ENSG00000116016.13 TPM= 25.36 Transcript Type= protein_coding chr2 46542722 46583114 46542722 46583114 + transcript1389.chr2.nic@RHOQ transcript1389.chr2.nic protein_coding 46542722,46576087,46576561,46580928 46543188,46576251,46576656,46583114 Gene ID= ENSG00000119729.11 TPM= 9.51 Transcript Type= NA chr2 46542728 46583121 46542728 46583121 + ENST00000238738.8@RHOQ ENST00000238738.8 protein_coding 46542728,46543754,46576087,46576561,46580928 46543188,46543812,46576251,46576656,46583121 Gene ID= ENSG00000119729.11 TPM= 62.03 Transcript Type= protein_coding chr2 46580937 46617119 46580937 46617119 - ENST00000281382.10@PIGF ENST00000281382.10 protein_coding 46616970,46614937,46613694,46612228,46592475,46580937 46617119,46615185,46613785,46612344,46592583,46581591 Gene ID= ENSG00000151665.12 TPM= 44.37 Transcript Type= protein_coding chr2 46581275 46617105 46581275 46617105 - transcript1385.chr2.nnic@PIGF transcript1385.chr2.nnic protein_coding 46616970,46613694,46612228,46592475,46581275 46617105,46613785,46612344,46592583,46581591 Gene ID= ENSG00000151665.12 TPM= 4.98 Transcript Type= NA chr2 46581285 46617051 46581285 46617051 - ENST00000306465.8@PIGF ENST00000306465.8 protein_coding 46616970,46614937,46613694,46612228,46592475,46588075,46581285 46617051,46615185,46613785,46612344,46592583,46588179,46581591 Gene ID= ENSG00000151665.12 TPM= 1.36 Transcript Type= protein_coding chr2 46617151 46625742 46617151 46625742 + ENST00000238892.3@CRIPT ENST00000238892.3 protein_coding 46617151,46618773,46619627,46623764,46624163 46617298,46618838,46619681,46623867,46625742 Gene ID= ENSG00000119878.5 TPM= 21.73 Transcript Type= protein_coding chr2 46699187 46762313 46699187 46762313 + ENST00000394861.2@SOCS5 ENST00000394861.2 protein_coding 46699187,46758519 46699449,46762313 Gene ID= ENSG00000171150.7 TPM= 6.34 Transcript Type= protein_coding chr2 46901874 46915868 46901874 46915868 - ENST00000319466.8@MCFD2 ENST00000319466.8 protein_coding 46915723,46909023,46907810,46901874 46915868,46909177,46907969,46905594 Gene ID= ENSG00000180398.11 TPM= 234.69 Transcript Type= protein_coding chr2 46901874 46915816 46901874 46915816 - ENST00000409913.5@MCFD2 ENST00000409913.5 protein_coding 46915723,46907810,46901874 46915816,46907969,46905594 Gene ID= ENSG00000180398.11 TPM= 25.51 Transcript Type= protein_coding chr2 46941206 47076137 46941206 47076137 + transcript1407.chr2.nic@TTC7A transcript1407.chr2.nic protein_coding 46941206,46950363,46956839,46958495,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47021862,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702 46941725,46950526,46957007,46958552,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47021979,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47076137 Gene ID= ENSG00000068724.15 TPM= 14.51 Transcript Type= NA chr2 46940506 47076137 46940506 47076137 + transcript1411.chr2.nic@TTC7A transcript1411.chr2.nic protein_coding 46940506,46950363,46956839,46958495,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702 46941725,46950526,46957007,46958552,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47076137 Gene ID= ENSG00000068724.15 TPM= 5.9 Transcript Type= NA chr2 46941224 47076137 46941224 47076137 + transcript1415.chr2.nic@TTC7A transcript1415.chr2.nic protein_coding 46941224,46950363,46956839,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47021862,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702 46941725,46950526,46958552,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47021979,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47076137 Gene ID= ENSG00000068724.15 TPM= 7.26 Transcript Type= NA chr2 46941174 47076135 46941174 47076135 + ENST00000319190.9@TTC7A ENST00000319190.9 protein_coding 46941174,46950363,46956839,46974973,46978792,46993450,46994357,46995136,47005922,47006641,47011331,47021862,47023408,47024287,47029224,47046315,47049949,47051746,47060769,47073702 46941725,46950526,46957007,46975103,46978907,46993528,46994514,46995199,47006059,47006724,47011435,47021979,47023465,47024359,47029384,47046431,47050046,47051880,47060971,47076135 Gene ID= ENSG00000068724.15 TPM= 60.69 Transcript Type= protein_coding chr2 47034204 47076137 47034204 47076137 + transcript1427.chr2.nic@TTC7A transcript1427.chr2.nic protein_coding 47034204,47046315,47049949,47051746,47060769,47073702 47034369,47046431,47050046,47051880,47060971,47076137 Gene ID= ENSG00000068724.15 TPM= 25.65 Transcript Type= NA chr2 46941226 46960670 46941226 46960670 + transcript1440.chr2.nnic@TTC7A transcript1440.chr2.nnic protein_coding 46941226,46950363,46956839,46957744 46941725,46950526,46957007,46960670 Gene ID= ENSG00000068724.15 TPM= 6.34 Transcript Type= NA chr2 47160082 47176601 47160082 47176601 - ENST00000272298.11@CALM2 ENST00000272298.11 protein_coding 47176441,47170734,47162519,47162286,47161723,47160082 47176601,47170764,47162662,47162392,47161858,47160804 Gene ID= ENSG00000143933.16 TPM= 939.5 Transcript Type= protein_coding chr2 47331380 47344989 47331380 47344989 - ENST00000413185.2@AC106869.1 ENST00000413185.2 lincRNA 47344901,47332934,47332273,47331380 47344989,47333026,47332408,47332107 Gene ID= ENSG00000234690.6 TPM= 1.81 Transcript Type= lincRNA chr2 47369148 47387034 47369148 47387034 + ENST00000263735.8@EPCAM ENST00000263735.8 protein_coding 47369148,47373463,47373808,47375234,47377014,47378953,47379769,47385166,47386572 47369581,47373570,47374048,47375299,47377077,47379054,47379969,47385210,47387034 Gene ID= ENSG00000119888.10 TPM= 32.6 Transcript Type= protein_coding chr2 47402969 47483228 47402969 47483228 + ENST00000233146.6@MSH2 ENST00000233146.6 protein_coding 47402969,47408401,47410094,47412414,47414269,47416296,47429742,47445548,47463031,47466658,47470965,47475025,47476367,47478272,47480696,47482779 47403402,47408555,47410372,47412560,47414418,47416429,47429941,47445657,47463154,47466808,47471062,47475270,47476571,47478519,47480871,47483228 Gene ID= ENSG00000095002.13 TPM= 25.36 Transcript Type= protein_coding chr2 47783082 47810101 47783082 47810101 + ENST00000234420.9@MSH6 ENST00000234420.9 protein_coding 47783082,47790927,47795894,47798611,47803420,47804910,47805618,47806204,47806452,47806779 47783493,47791123,47796063,47801155,47803685,47805027,47805707,47806358,47806651,47810101 Gene ID= ENSG00000116062.14 TPM= 37.13 Transcript Type= protein_coding chr2 47783082 47806953 47783082 47806953 + ENST00000445503.5@MSH6 ENST00000445503.5 protein_coding 47783082,47790927,47798611,47803420,47804910,47805618,47806204,47806452,47806779 47783493,47791123,47801155,47803685,47805027,47805707,47806358,47806651,47806953 Gene ID= ENSG00000116062.14 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr2 47806920 47905793 47806920 47905793 - ENST00000403359.7@FBXO11 ENST00000403359.7 protein_coding 47905489,47839642,47839419,47838859,47835872,47834788,47834579,47832964,47832769,47832572,47832349,47823143,47822218,47820362,47818956,47818779,47813791,47813234,47810316,47809600,47809158,47808329,47806920 47905793,47839769,47839500,47839003,47836001,47834871,47834711,47833070,47832880,47832678,47832486,47823360,47822303,47820456,47819078,47818864,47813867,47813377,47810426,47809707,47809266,47808427,47808247 Gene ID= ENSG00000138081.20 TPM= 4.53 Transcript Type= protein_coding chr2 48440742 48515386 48440742 48515386 + transcript1474.chr2.nnic@PPP1R21 transcript1474.chr2.nnic protein_coding 48440742,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48505718,48507269,48510015,48511340,48514715 48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48505857,48507385,48510113,48511468,48515386 Gene ID= ENSG00000162869.15 TPM= 1.81 Transcript Type= NA chr2 48440795 48471452 48440795 48471452 + transcript1487.chr2.nic@PPP1R21 transcript1487.chr2.nic protein_coding 48440795,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279 48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471452 Gene ID= ENSG00000162869.15 TPM= 3.62 Transcript Type= NA chr2 48440769 48515385 48440769 48515385 + ENST00000416913.5@PPP1R21 ENST00000416913.5 protein_coding 48440769,48451008,48454556,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48507269,48510015,48511340,48514715 48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48507385,48510113,48511468,48515385 Gene ID= ENSG00000162869.15 TPM= 10.87 Transcript Type= nonsense_mediated_decay chr2 48440769 48515386 48440769 48515386 + ENST00000281394.8@PPP1R21 ENST00000281394.8 protein_coding 48440769,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48507269,48510015,48511340,48514715 48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48507385,48510113,48511468,48515386 Gene ID= ENSG00000162869.15 TPM= 8.15 Transcript Type= protein_coding chr2 48440797 48515386 48440797 48515386 + ENST00000294952.12@PPP1R21 ENST00000294952.12 protein_coding 48440797,48451008,48454595,48458126,48459754,48460095,48461138,48464937,48465493,48471087,48471279,48474683,48479924,48486631,48491018,48495679,48498493,48505564,48507269,48510015,48511340,48514715 48441010,48451076,48454741,48458227,48459918,48460153,48461232,48464989,48465642,48471188,48471367,48474819,48480016,48486758,48491170,48495771,48498735,48505596,48507385,48510113,48511468,48515386 Gene ID= ENSG00000162869.15 TPM= 37.13 Transcript Type= protein_coding chr2 53669981 53786942 53669981 53786942 - ENST00000263634.7@ASB3 ENST00000263634.7 protein_coding 53786821,53765377,53750783,53729458,53728712,53716566,53714384,53700271,53693884,53669981 53786942,53765585,53750941,53729570,53728847,53716743,53714581,53700528,53694014,53670690 Gene ID= ENSG00000115239.21 TPM= 19.02 Transcript Type= protein_coding chr2 53670319 53787009 53670319 53787009 - ENST00000394717.3@ASB3 ENST00000394717.3 protein_coding 53786821,53750783,53729458,53728712,53716566,53714384,53700271,53693884,53670319 53787009,53750941,53729570,53728847,53716743,53714581,53700528,53694014,53670690 Gene ID= ENSG00000115239.21 TPM= 3.62 Transcript Type= protein_coding chr2 53767792 53775196 53767792 53775196 + ENST00000295304.4@CHAC2 ENST00000295304.4 protein_coding 53767792,53771907,53774142 53768021,53771942,53775196 Gene ID= ENSG00000143942.4 TPM= 8.15 Transcript Type= protein_coding chr2 53787080 53818819 53787080 53818819 + ENST00000378239.5@ERLEC1 ENST00000378239.5 protein_coding 53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53809214,53812949,53814543,53814860,53817898 53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53809273,53813073,53814620,53814935,53818819 Gene ID= ENSG00000068912.13 TPM= 33.05 Transcript Type= protein_coding chr2 53787080 53818819 53787080 53818819 + ENST00000185150.8@ERLEC1 ENST00000185150.8 protein_coding 53787080,53794345,53795933,53797515,53797732,53799047,53801397,53801713,53808299,53809214,53812949,53814543,53814860,53817898 53787372,53794449,53796013,53797592,53797795,53799081,53801620,53801842,53808460,53809273,53813073,53814620,53814935,53818819 Gene ID= ENSG00000068912.13 TPM= 113.65 Transcript Type= protein_coding chr2 53864067 53970840 53864067 53970840 - ENST00000404125.5@PSME4 ENST00000404125.5 protein_coding 53970543,53949143,53948421,53939956,53937391,53936764,53936087,53934605,53932668,53931835,53928117,53927394,53925959,53925539,53923321,53923049,53922517,53920889,53920193,53919151,53910075,53908784,53908510,53908320,53906806,53906598,53904025,53901350,53899881,53898301,53897870,53896804,53895583,53895007,53893674,53892808,53890104,53888721,53887858,53887259,53885690,53875627,53874339,53869376,53866747,53866085,53864067 53970840,53949283,53948537,53940000,53937540,53936827,53936161,53934727,53932760,53932100,53928303,53927483,53926023,53925689,53923419,53923118,53922584,53921104,53920350,53919246,53910130,53908840,53908565,53908418,53906868,53906693,53904156,53901559,53900017,53898354,53897999,53896885,53895736,53895076,53893799,53892960,53890208,53888812,53887989,53887467,53885775,53875755,53874494,53869538,53866880,53866223,53865573 Gene ID= ENSG00000068878.14 TPM= 4.53 Transcript Type= protein_coding chr2 54115454 54305136 54115454 54305136 + transcript1517.chr2.nnic@ACYP2 transcript1517.chr2.nnic protein_coding 54115454,54135453,54138639,54146462,54147392,54304688 54115756,54135469,54138748,54146552,54147432,54305136 Gene ID= ENSG00000170634.12 TPM= 2.72 Transcript Type= NA chr2 53971072 54052250 53971072 54052250 + transcript1525.chr2.nic@ACYP2 transcript1525.chr2.nic protein_coding 53971072,53973713,54050958 53971321,53973810,54052250 Gene ID= ENSG00000170634.12 TPM= 4.53 Transcript Type= NA chr2 54115504 54305300 54115504 54305300 + ENST00000394666.7@ACYP2 ENST00000394666.7 protein_coding 54115504,54135453,54138639,54304688 54115756,54135469,54138748,54305300 Gene ID= ENSG00000170634.12 TPM= 57.05 Transcript Type= protein_coding chr2 54557769 54669682 54557769 54669682 + transcript1533.chr2.nic@SPTBN1 transcript1533.chr2.nic protein_coding 54557769,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54664453,54665915,54667604,54668351 54558887,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54664691,54666088,54667646,54669682 Gene ID= ENSG00000115306.15 TPM= 69.16 Transcript Type= NA chr2 54456285 54669675 54456285 54669675 + ENST00000356805.8@SPTBN1 ENST00000356805.8 protein_coding 54456285,54526372,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936,54664453,54665915,54667604,54668351 54456518,54526566,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54659999,54664691,54666088,54667646,54669675 Gene ID= ENSG00000115306.15 TPM= 132.54 Transcript Type= protein_coding chr2 54558394 54662308 54558394 54662308 + ENST00000333896.5@SPTBN1 ENST00000333896.5 protein_coding 54558394,54599092,54612161,54616207,54617608,54618078,54621400,54622300,54623479,54624804,54625932,54628097,54628933,54629892,54630855,54632566,54637713,54642983,54644323,54645229,54645928,54646194,54647131,54648986,54649615,54653609,54655070,54655914,54657850,54659154,54659936 54558887,54599243,54612334,54616298,54617688,54618193,54621512,54622487,54623596,54624962,54626234,54628250,54629803,54630029,54631611,54632768,54637803,54643129,54644586,54645453,54646017,54646475,54647261,54649190,54649989,54653853,54655208,54655998,54658046,54659266,54662308 Gene ID= ENSG00000115306.15 TPM= 12.86 Transcript Type= protein_coding chr2 54972189 55050544 54972189 55050544 - ENST00000317610.11@RTN4 ENST00000317610.11 protein_coding 55049745,54987491,54982515,54974695,54973821,54973563,54972189 55050544,54987698,54982653,54974764,54973867,54973621,54973198 Gene ID= ENSG00000115310.17 TPM= 490.26 Transcript Type= protein_coding chr2 54972189 55050544 54972189 55050544 - ENST00000357732.8@RTN4 ENST00000357732.8 protein_coding 55049745,55028164,54987491,54982515,54974695,54973821,54973563,54972189 55050544,55028220,54987698,54982653,54974764,54973867,54973621,54973198 Gene ID= ENSG00000115310.17 TPM= 29.04 Transcript Type= protein_coding chr2 55236621 55269253 55236621 55269253 - transcript1576.chr2.nic@MTIF2 transcript1576.chr2.nic protein_coding 55269169,55268578,55267569,55266381,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236621 55269253,55268739,55267635,55266518,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820 Gene ID= ENSG00000085760.14 TPM= 4.07 Transcript Type= NA chr2 55236620 55269248 55236620 55269248 - ENST00000263629.8@MTIF2 ENST00000263629.8 protein_coding 55269169,55268578,55267569,55263640,55262316,55254654,55254041,55252477,55249395,55246337,55244029,55243416,55242940,55240011,55237288,55236620 55269248,55268739,55267635,55263865,55262427,55254825,55254201,55252653,55249534,55246461,55244233,55243668,55243080,55240175,55237428,55236820 Gene ID= ENSG00000085760.14 TPM= 14.04 Transcript Type= protein_coding chr2 55548377 55617621 55548377 55617621 - transcript1591.chr2.nnic@PPP4R3B transcript1591.chr2.nnic protein_coding 55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55573619,55568194,55564902,55564313,55558775,55548377 55617621,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55573777,55568363,55565041,55564476,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 1.81 Transcript Type= NA chr2 55547293 55617618 55547293 55617618 - transcript1594.chr2.nnic@PPP4R3B transcript1594.chr2.nnic protein_coding 55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55547293 55617618,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564476,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 2.72 Transcript Type= NA chr2 55547293 55617622 55547293 55617622 - transcript1595.chr2.nnic@PPP4R3B transcript1595.chr2.nnic protein_coding 55617144,55615451,55603978,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55573619,55568194,55564902,55564313,55558775,55547293 55617622,55615506,55604076,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55573777,55568363,55565041,55564497,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 5.66 Transcript Type= NA chr2 55547293 55617621 55547293 55617621 - transcript1602.chr2.nnic@PPP4R3B transcript1602.chr2.nnic protein_coding 55617144,55615451,55603978,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55547293 55617621,55615506,55604076,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 6.57 Transcript Type= NA chr2 55547292 55617614 55547292 55617614 - ENST00000611717.4@PPP4R3B ENST00000611717.4 protein_coding 55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55568194,55564902,55564313,55558775,55547292 55617614,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55568363,55565041,55564497,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 8.15 Transcript Type= protein_coding chr2 55548378 55617608 55548378 55617608 - ENST00000616288.4@PPP4R3B ENST00000616288.4 protein_coding 55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55577315,55573619,55568194,55564902,55564313,55558775,55548378 55617608,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55577356,55573777,55568363,55565041,55564497,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 28.3 Transcript Type= protein_coding chr2 55548379 55617588 55548379 55617588 - ENST00000616407.1@PPP4R3B ENST00000616407.1 protein_coding 55617144,55615451,55603978,55598416,55588879,55586618,55585051,55581567,55579679,55578247,55577315,55573619,55568194,55564902,55564313,55558775,55548379 55617588,55615506,55604076,55599039,55588956,55586734,55585167,55581698,55579781,55578342,55577356,55573777,55568363,55565041,55564497,55558968,55550006 Gene ID= ENSG00000275052.4 TPM= 15.62 Transcript Type= protein_coding chr2 55635996 55693856 55635996 55693856 - transcript1612.chr2.nic@PNPT1 transcript1612.chr2.nic protein_coding 55693663,55687645,55686370,55684943,55683785,55680855,55680712,55679682,55672893,55671995,55671319,55667862,55666991,55661956,55660157,55656305,55656131,55654900,55647347,55646415,55646259,55644637,55643319,55643158,55640627,55637552,55635996 55693856,55687705,55686444,55685048,55683834,55680918,55680759,55679795,55673079,55672046,55671376,55667958,55667093,55662026,55660193,55656371,55656220,55654953,55647453,55646486,55646322,55645432,55643425,55643213,55640705,55637599,55636392 Gene ID= ENSG00000138035.14 TPM= 1.81 Transcript Type= NA chr2 55865967 55924139 55865967 55924139 - ENST00000394555.6@EFEMP1 ENST00000394555.6 protein_coding 55923711,55922360,55918219,55917665,55881612,55877746,55876623,55874946,55871000,55870720,55865967 55924139,55922447,55918267,55918051,55881734,55877865,55876742,55875065,55871123,55870915,55867234 Gene ID= ENSG00000115380.19 TPM= 73.5 Transcript Type= protein_coding chr2 55865968 55923790 55865968 55923790 - transcript1619.chr2.nic@EFEMP1 transcript1619.chr2.nic protein_coding 55923711,55922899,55922360,55918219,55917665,55881612,55874946,55871000,55870720,55865968 55923790,55922939,55922447,55918267,55918051,55881734,55875065,55871123,55870915,55867234 Gene ID= ENSG00000115380.19 TPM= 4.07 Transcript Type= NA chr2 55865968 55923832 55865968 55923832 - transcript1620.chr2.nic@EFEMP1 transcript1620.chr2.nic protein_coding 55923711,55922360,55918219,55917665,55881612,55874946,55871000,55870720,55865968 55923832,55922447,55918267,55918051,55881734,55875065,55871123,55870915,55867234 Gene ID= ENSG00000115380.19 TPM= 4.68 Transcript Type= NA chr2 56183848 56386171 56183848 56386171 + transcript1621.chr2.nic@CCDC85A transcript1621.chr2.nic protein_coding 56183848,56192477,56342879,56384266 56184900,56193440,56342955,56386171 Gene ID= ENSG00000055813.5 TPM= 1.81 Transcript Type= NA chr2 58046656 58161642 58046656 58161642 + transcript1623.chr2.nic@VRK2 transcript1623.chr2.nic protein_coding 58046656,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154754,58159349 58046821,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58161642 Gene ID= ENSG00000028116.16 TPM= 1.81 Transcript Type= NA chr2 58046684 58161642 58046684 58161642 + transcript1625.chr2.nic@VRK2 transcript1625.chr2.nic protein_coding 58046684,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58154754,58159349 58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58154802,58161642 Gene ID= ENSG00000028116.16 TPM= 1.81 Transcript Type= NA chr2 58046656 58161642 58046656 58161642 + transcript1630.chr2.nic@VRK2 transcript1630.chr2.nic protein_coding 58046656,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58159349 58046821,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58161642 Gene ID= ENSG00000028116.16 TPM= 2.72 Transcript Type= NA chr2 58046765 58134843 58046765 58134843 + transcript1646.chr2.nic@VRK2 transcript1646.chr2.nic protein_coding 58046765,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808 58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58134843 Gene ID= ENSG00000028116.16 TPM= 5.43 Transcript Type= NA chr2 58046684 58060660 58046684 58060660 + transcript1654.chr2.nnic@VRK2 transcript1654.chr2.nnic protein_coding 58046684,58048827,58057862 58046868,58048967,58060660 Gene ID= ENSG00000028116.16 TPM= 1.81 Transcript Type= NA chr2 58046691 58159871 58046691 58159871 + ENST00000340157.8@VRK2 ENST00000340157.8 protein_coding 58046691,58048827,58084089,58084881,58086339,58088341,58089631,58123101,58131808,58135141,58139666,58146316,58159349 58046868,58048967,58084138,58084950,58086426,58088446,58089723,58123233,58131928,58135199,58139832,58146474,58159871 Gene ID= ENSG00000028116.16 TPM= 5.43 Transcript Type= protein_coding chr2 58159242 58241376 58159242 58241376 - transcript1622.chr2.nic@FANCL transcript1622.chr2.nic protein_coding 58241218,58232054,58229814,58226728,58221942,58204130,58198594,58194229,58165724,58163434,58163029,58162866,58161522,58160108,58159242 58241376,58232112,58229874,58226784,58222042,58204226,58198662,58194273,58165874,58163517,58163074,58162947,58161638,58160179,58159800 Gene ID= ENSG00000115392.11 TPM= 2.94 Transcript Type= NA chr2 58159242 58222096 58159242 58222096 - transcript1642.chr2.nic@FANCL transcript1642.chr2.nic protein_coding 58221942,58204130,58198594,58165724,58163434,58163029,58162866,58161522,58160108,58159242 58222096,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800 Gene ID= ENSG00000115392.11 TPM= 4.75 Transcript Type= NA chr2 58159247 58241350 58159247 58241350 - ENST00000402135.7@FANCL ENST00000402135.7 protein_coding 58241218,58232054,58229814,58226728,58221942,58204130,58198579,58165724,58163434,58163029,58162866,58161522,58160108,58159247 58241350,58232112,58229874,58226784,58222042,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800 Gene ID= ENSG00000115392.11 TPM= 13.81 Transcript Type= protein_coding chr2 58159247 58241350 58159247 58241350 - ENST00000233741.8@FANCL ENST00000233741.8 protein_coding 58241218,58232054,58229814,58226728,58221942,58204130,58198594,58165724,58163434,58163029,58162866,58161522,58160108,58159247 58241350,58232112,58229874,58226784,58222042,58204226,58198662,58165874,58163517,58163074,58162947,58161638,58160179,58159800 Gene ID= ENSG00000115392.11 TPM= 36.45 Transcript Type= protein_coding chr2 60451167 60553567 60451167 60553567 - ENST00000359629.9@BCL11A ENST00000359629.9 protein_coding 60553216,60545971,60468732,60462282,60451167 60553567,60546300,60468833,60462424,60452666 Gene ID= ENSG00000119866.20 TPM= 12.68 Transcript Type= protein_coding chr2 60457198 60553498 60457198 60553498 - ENST00000335712.10@BCL11A ENST00000335712.10 protein_coding 60553216,60545971,60468732,60457198 60553498,60546300,60468833,60462424 Gene ID= ENSG00000119866.20 TPM= 18.11 Transcript Type= protein_coding chr2 60756230 60798963 60756230 60798963 + ENST00000238714.7@PAPOLG ENST00000238714.7 protein_coding 60756230,60760134,60761741,60768470,60768781,60770458,60771519,60775034,60779637,60780707,60781885,60782686,60783156,60786947,60787511,60791761,60792129,60793627,60793971,60794710,60794964,60797062 60756495,60760295,60761807,60768551,60768890,60770511,60771630,60775123,60779775,60780779,60782005,60782770,60783209,60787066,60787620,60791882,60792289,60793715,60794191,60794775,60795020,60798963 Gene ID= ENSG00000115421.12 TPM= 5.43 Transcript Type= protein_coding chr2 61009847 61017448 61009847 61017448 - transcript1678.chr2.nic@PUS10 transcript1678.chr2.nic protein_coding 61017237,61011765,61009847 61017448,61011905,61010888 Gene ID= ENSG00000162927.13 TPM= 1.81 Transcript Type= NA chr2 61017701 61051986 61017701 61051986 + transcript1669.chr2.nnic@PEX13 transcript1669.chr2.nnic protein_coding 61017701,61031419,61045726,61048472,61050906 61017851,61032113,61045851,61049493,61051986 Gene ID= ENSG00000162928.8 TPM= 17.66 Transcript Type= NA chr2 61017701 61051723 61017701 61051723 + transcript1670.chr2.nnic@PEX13 transcript1670.chr2.nnic protein_coding 61017701,61031419,61045726,61048472,61050877 61017851,61032113,61045851,61050106,61051723 Gene ID= ENSG00000162928.8 TPM= 13.13 Transcript Type= NA chr2 61145097 61164845 61145097 61164845 + transcript1682.chr2.nnic@AC016747.4 transcript1682.chr2.nnic processed_transcript 61145097,61159318,61160530,61162842,61163052,61164354 61145196,61159439,61160603,61162955,61163232,61164845 Gene ID= ENSG00000274769.1 TPM= 2.34 Transcript Type= NA chr2 61145104 61164845 61145104 61164845 + transcript1684.chr2.nnic@AC016747.4 transcript1684.chr2.nnic processed_transcript 61145104,61148738,61162842,61163052,61164354 61145196,61148859,61162955,61163232,61164845 Gene ID= ENSG00000274769.1 TPM= 3.24 Transcript Type= NA chr2 61145116 61164845 61145116 61164845 + transcript1685.chr2.nnic@AC016747.4 transcript1685.chr2.nnic processed_transcript 61145116,61160530,61162842,61163052,61164354 61145196,61160603,61162955,61163232,61164845 Gene ID= ENSG00000274769.1 TPM= 2.34 Transcript Type= NA chr2 61141592 61144950 61141592 61144950 - ENST00000420918.3@AC016747.1 ENST00000420918.3 processed_transcript 61144773,61141592 61144950,61143945 Gene ID= ENSG00000212978.6 TPM= 21.73 Transcript Type= lincRNA chr2 61145097 61164845 61145097 61164845 + transcript1683.chr2.nnic@C2orf74 transcript1683.chr2.nnic protein_coding 61145097,61159318,61162842,61163052,61164354 61145196,61159439,61162955,61163232,61164845 Gene ID= ENSG00000237651.6 TPM= 5.96 Transcript Type= NA chr2 61145068 61164808 61145068 61164808 + ENST00000426997.5@C2orf74 ENST00000426997.5 protein_coding 61145068,61162842,61163052,61164354 61145196,61162955,61163232,61164808 Gene ID= ENSG00000237651.6 TPM= 12.07 Transcript Type= protein_coding chr2 61145108 61164809 61145108 61164809 + ENST00000464909.2@C2orf74 ENST00000464909.2 protein_coding 61145108,61163052,61164354 61145196,61163232,61164809 Gene ID= ENSG00000237651.6 TPM= 3.92 Transcript Type= protein_coding chr2 61177400 61187550 61177400 61187550 + transcript1695.chr2.nnic@AHSA2 transcript1695.chr2.nnic protein_coding 61177400,61178981,61181320,61184712,61185502,61186446,61186617 61177789,61179171,61181405,61184800,61185618,61186497,61187550 Gene ID= ENSG00000173209.22 TPM= 8.15 Transcript Type= NA chr2 61177418 61191207 61177418 61191207 + transcript1702.chr2.nnic@AHSA2 transcript1702.chr2.nnic protein_coding 61177418,61181320,61184712,61185502,61186446,61187909 61179171,61181405,61184800,61185618,61186497,61191207 Gene ID= ENSG00000173209.22 TPM= 2.72 Transcript Type= NA chr2 61177458 61186922 61177458 61186922 + transcript1708.chr2.nnic@AHSA2 transcript1708.chr2.nnic protein_coding 61177458,61181320,61184712,61185502,61186659 61179171,61181405,61184800,61186497,61186922 Gene ID= ENSG00000173209.22 TPM= 2.72 Transcript Type= NA chr2 61187463 61470769 61187463 61470769 - ENST00000398571.6@USP34 ENST00000398571.6 protein_coding 61470650,61420746,61405708,61395183,61394853,61383269,61380169,61378363,61370498,61370321,61350568,61350260,61349250,61348756,61347870,61343815,61339566,61339351,61333882,61331276,61325375,61319173,61317654,61314875,61314585,61311784,61311540,61301354,61300951,61296800,61295168,61294949,61293464,61288677,61284875,61283409,61283145,61281090,61280244,61278388,61278165,61265984,61265397,61259711,61257204,61257052,61256873,61256384,61248511,61246324,61245210,61241766,61241560,61236325,61236161,61236026,61235845,61232452,61229548,61228827,61228645,61227067,61223248,61223060,61222619,61221502,61220310,61214060,61211772,61208899,61206760,61206017,61204497,61204256,61203140,61192901,61190518,61190271,61188910,61187463 61470769,61420833,61406128,61395233,61395002,61383336,61380361,61378424,61370579,61370413,61350693,61350389,61349285,61348886,61348480,61344029,61339681,61339478,61333971,61331371,61325457,61319327,61317767,61314974,61314744,61311910,61311687,61301454,61301160,61296925,61295290,61295032,61293550,61288877,61284957,61283449,61283269,61281242,61280348,61278443,61278285,61266167,61265557,61259776,61257350,61257108,61256950,61256478,61248683,61246477,61245288,61241819,61241655,61236389,61236236,61236073,61235910,61232532,61229633,61228995,61228719,61227218,61223296,61223164,61222663,61221606,61220457,61214694,61211929,61208977,61206886,61206124,61204601,61204380,61203263,61192980,61190658,61190414,61189069,61188709 Gene ID= ENSG00000115464.14 TPM= 1.81 Transcript Type= protein_coding chr2 61226794 61470737 61226794 61470737 - transcript1712.chr2.nic@USP34 transcript1712.chr2.nic protein_coding 61470650,61420746,61405708,61395183,61394853,61383269,61380169,61378363,61370498,61370321,61350568,61350260,61349250,61348756,61347870,61343815,61339566,61339351,61333882,61331276,61325375,61319173,61317654,61314875,61314585,61311784,61311540,61301354,61300951,61296800,61295168,61294949,61293464,61288677,61284875,61283409,61283145,61281090,61280244,61278388,61278165,61265984,61265397,61259711,61257204,61257052,61256873,61256384,61248511,61246324,61245210,61241766,61241560,61236325,61236161,61236026,61235845,61232452,61229548,61228827,61228645,61226794 61470737,61420833,61406128,61395233,61395002,61383336,61380361,61378424,61370579,61370413,61350693,61350389,61349285,61348886,61348480,61344029,61339681,61339478,61333971,61331371,61325457,61319327,61317767,61314974,61314744,61311910,61311687,61301454,61301160,61296925,61295290,61295032,61293550,61288877,61284957,61283449,61283269,61281242,61280348,61278443,61278285,61266167,61265557,61259776,61257350,61257108,61256950,61256478,61248683,61246477,61245288,61241819,61241655,61236389,61236236,61236073,61235910,61232532,61229633,61228995,61228719,61227218 Gene ID= ENSG00000115464.14 TPM= 2.72 Transcript Type= NA chr2 61868089 61888804 61868089 61888804 - ENST00000394440.7@CCT4 ENST00000394440.7 protein_coding 61888381,61885020,61883459,61880286,61878869,61877393,61876920,61876095,61873197,61873002,61872458,61872082,61869440,61868089 61888804,61885072,61883548,61880394,61879011,61877514,61877052,61876234,61873293,61873112,61872588,61872316,61869553,61868706 Gene ID= ENSG00000115484.14 TPM= 174.77 Transcript Type= protein_coding chr2 61905653 62149124 61905653 62149124 + transcript1732.chr2.nnic@COMMD1 transcript1732.chr2.nnic protein_coding 61905653,62000701,62135831,62146266 61905858,62000982,62135979,62149124 Gene ID= ENSG00000173163.10 TPM= 9.06 Transcript Type= NA chr2 62196113 62224731 62196113 62224731 + ENST00000301998.4@B3GNT2 ENST00000301998.4 protein_coding 62196113,62222212 62196355,62224731 Gene ID= ENSG00000170340.10 TPM= 40.75 Transcript Type= protein_coding chr2 62500221 62506341 62500221 62506341 - ENST00000335390.5@TMEM17 ENST00000335390.5 protein_coding 62506030,62502691,62502437,62500221 62506341,62502794,62502550,62501487 Gene ID= ENSG00000186889.9 TPM= 9.06 Transcript Type= protein_coding chr2 63121383 63588799 63121383 63588799 - ENST00000272321.11@WDPCP ENST00000272321.11 protein_coding 63588197,63492856,63487447,63486542,63484917,63484604,63439757,63437421,63433745,63404048,63381906,63378386,63313248,63259307,63174670,63153495,63152914,63121383 63588799,63492940,63487494,63486586,63484987,63484663,63439871,63437554,63433936,63404657,63382094,63378509,63313311,63259409,63174832,63153574,63152945,63122056 Gene ID= ENSG00000143951.15 TPM= 8.15 Transcript Type= protein_coding chr2 63588609 63607197 63588609 63607197 + ENST00000233114.12@MDH1 ENST00000233114.12 protein_coding 63588609,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862 63589046,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607197 Gene ID= ENSG00000014641.17 TPM= 408.85 Transcript Type= protein_coding chr2 63589151 63607194 63589151 63607194 + ENST00000539945.5@MDH1 ENST00000539945.5 protein_coding 63589151,63594488,63595423,63597399,63599170,63604696,63605280,63605939,63606862 63589384,63594586,63595519,63597574,63599292,63604872,63605393,63606028,63607194 Gene ID= ENSG00000014641.17 TPM= 13.13 Transcript Type= protein_coding chr2 63841871 63891575 63841871 63891575 + transcript1763.chr2.nic@UGP2 transcript1763.chr2.nic protein_coding 63841871,63842539,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120 63842204,63842599,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891575 Gene ID= ENSG00000169764.15 TPM= 12.3 Transcript Type= NA chr2 63840940 63891562 63840940 63891562 + ENST00000394417.6@UGP2 ENST00000394417.6 protein_coding 63840940,63856306,63857829,63882466,63883960,63885589,63886341,63887402,63890081,63891120 63841232,63856433,63857936,63882651,63884093,63885886,63886538,63887644,63890185,63891562 Gene ID= ENSG00000169764.15 TPM= 100.14 Transcript Type= protein_coding chr2 63892146 64019072 63892146 64019072 - ENST00000409558.8@VPS54 ENST00000409558.8 protein_coding 64018938,63983864,63981646,63972166,63968957,63965835,63962058,63949037,63947383,63944600,63942465,63933673,63921206,63920446,63919883,63916900,63914182,63913223,63912540,63912345,63899474,63897496,63892146 64019072,63984019,63981851,63972244,63968991,63965966,63962443,63949163,63947490,63944655,63942561,63934013,63921335,63920627,63919995,63916963,63914287,63913310,63912661,63912425,63899581,63897590,63893535 Gene ID= ENSG00000143952.19 TPM= 2.72 Transcript Type= protein_coding chr2 64092652 64144454 64092652 64144454 - ENST00000358912.4@PELI1 ENST00000358912.4 protein_coding 64144081,64108240,64104701,64100398,64096413,64096125,64092652 64144454,64108379,64104830,64100499,64096610,64096313,64095268 Gene ID= ENSG00000197329.11 TPM= 6.34 Transcript Type= protein_coding chr2 64454627 64461377 64454627 64461377 + transcript1788.chr2.nic@LGALSL transcript1788.chr2.nic protein_coding 64454627,64455589,64456288,64458285 64455415,64455677,64456465,64461377 Gene ID= ENSG00000119862.12 TPM= 4.98 Transcript Type= NA chr2 64454092 64461381 64454092 64461381 + ENST00000238875.9@LGALSL ENST00000238875.9 protein_coding 64454092,64455344,64455589,64456288,64458285 64454581,64455415,64455677,64456465,64461381 Gene ID= ENSG00000119862.12 TPM= 38.49 Transcript Type= protein_coding chr2 64524305 64592997 64524305 64592997 + ENST00000238855.11@AFTPH ENST00000238855.11 protein_coding 64524305,64551443,64567562,64569092,64569623,64572946,64579486,64581190,64585422,64591888 64524612,64553409,64567713,64569218,64569679,64573068,64579546,64581273,64585545,64592997 Gene ID= ENSG00000119844.15 TPM= 5.73 Transcript Type= protein_coding chr2 64524305 64593005 64524305 64593005 + ENST00000238856.8@AFTPH ENST00000238856.8 protein_coding 64524305,64551443,64567562,64569092,64569623,64572946,64579486,64585422,64591885 64524612,64553409,64567713,64569218,64569679,64573068,64579546,64585545,64593005 Gene ID= ENSG00000119844.15 TPM= 30.18 Transcript Type= protein_coding chr2 64524301 64592981 64524301 64592981 + transcript1791.chr2.nic@AFTPH transcript1791.chr2.nic protein_coding 64524301,64551443,64567562,64569092,64569623,64572946,64585422,64591885 64524612,64553409,64567713,64569218,64569679,64573068,64585545,64592981 Gene ID= ENSG00000119844.15 TPM= 3.92 Transcript Type= NA chr2 64631621 64653913 64631621 64653913 - ENST00000313349.3@SERTAD2 ENST00000313349.3 protein_coding 64653620,64631621 64653913,64636875 Gene ID= ENSG00000179833.4 TPM= 2.72 Transcript Type= protein_coding chr2 64988399 65023870 64988399 65023870 + transcript1797.chr2.nic@SLC1A4 transcript1797.chr2.nic protein_coding 64988399,65001448,65003953,65010597,65016440,65018071,65018545,65020912 64988620,65001490,65004015,65010763,65016673,65018265,65018679,65023870 Gene ID= ENSG00000115902.10 TPM= 14.6 Transcript Type= NA chr2 64989401 65023865 64989401 65023865 + ENST00000234256.3@SLC1A4 ENST00000234256.3 protein_coding 64989401,65001448,65003953,65010597,65016440,65018071,65018545,65020912 64990170,65001490,65004015,65010763,65016673,65018265,65018679,65023865 Gene ID= ENSG00000115902.10 TPM= 238.27 Transcript Type= protein_coding chr2 65056360 65074488 65056360 65074488 + transcript1815.chr2.nic@CEP68 transcript1815.chr2.nic protein_coding 65056360,65069399,65071454,65072884,65074282 65056528,65069801,65072569,65072980,65074488 Gene ID= ENSG00000011523.13 TPM= 2.26 Transcript Type= NA chr2 65056416 65074488 65056416 65074488 + transcript1818.chr2.nic@CEP68 transcript1818.chr2.nic protein_coding 65056416,65069399,65071454,65074282 65056528,65069801,65072980,65074488 Gene ID= ENSG00000011523.13 TPM= 3.17 Transcript Type= NA chr2 65056372 65087004 65056372 65087004 + ENST00000377990.6@CEP68 ENST00000377990.6 protein_coding 65056372,65069399,65071454,65074282,65077868,65082536,65083639 65056528,65069801,65072980,65074404,65077964,65082709,65087004 Gene ID= ENSG00000011523.13 TPM= 20.83 Transcript Type= protein_coding chr2 65086852 65130127 65086852 65130127 - transcript1816.chr2.nnic@RAB1A transcript1816.chr2.nnic protein_coding 65129893,65104734,65097971,65088939,65086852 65130127,65104806,65098066,65089070,65088690 Gene ID= ENSG00000138069.16 TPM= 4.83 Transcript Type= NA chr2 65086855 65130106 65086855 65130106 - ENST00000409784.7@RAB1A ENST00000409784.7 protein_coding 65129893,65104734,65097971,65090983,65088939,65086855 65130106,65104806,65098066,65091078,65089070,65088690 Gene ID= ENSG00000138069.16 TPM= 212.65 Transcript Type= protein_coding chr2 65227753 65271253 65227753 65271253 + ENST00000260641.9@ACTR2 ENST00000260641.9 protein_coding 65227753,65239852,65246524,65251027,65253728,65255545,65261247,65265043,65268564 65227957,65239962,65246739,65251099,65253864,65255694,65261392,65265175,65271253 Gene ID= ENSG00000138071.13 TPM= 107.76 Transcript Type= protein_coding chr2 66435125 66572795 66435125 66572795 + transcript1832.chr2.nnic@MEIS1 transcript1832.chr2.nnic protein_coding 66435125,66436896,66437734,66439843,66440562,66441414,66442902,66464107,66512147,66547943,66567451,66568665,66569050,66571244 66435868,66436940,66437963,66439984,66440612,66441468,66443048,66464220,66512294,66548019,66567511,66568756,66569145,66572795 Gene ID= ENSG00000143995.19 TPM= 10.94 Transcript Type= NA chr2 66435125 66572795 66435125 66572795 + transcript1841.chr2.nnic@MEIS1 transcript1841.chr2.nnic protein_coding 66435125,66437737,66439843,66440562,66441414,66442902,66464107,66512147,66547943,66567451,66568665,66571244 66435872,66437963,66439984,66440612,66441468,66443048,66464220,66512294,66548019,66567511,66568756,66572795 Gene ID= ENSG00000143995.19 TPM= 82.02 Transcript Type= NA chr2 66435572 66549139 66435572 66549139 + transcript1854.chr2.nnic@MEIS1 transcript1854.chr2.nnic protein_coding 66435572,66437737,66439843,66440562,66441414,66442902,66464107,66512147,66547943 66435872,66437963,66439984,66440612,66441468,66443048,66464220,66512294,66549139 Gene ID= ENSG00000143995.19 TPM= 22.87 Transcript Type= NA chr2 66439321 66572759 66439321 66572759 + ENST00000495021.6@MEIS1 ENST00000495021.6 protein_coding 66439321,66439843,66440562,66441414,66442902,66464109,66512149,66547943,66567453,66568667,66569050,66571246 66439671,66439984,66440612,66441464,66443048,66464220,66512294,66548019,66567511,66568756,66569145,66572759 Gene ID= ENSG00000143995.19 TPM= 5.43 Transcript Type= protein_coding chr2 67175149 67213702 67175149 67213702 - transcript1869.chr2.nnic@LINC01829 transcript1869.chr2.nnic lincRNA 67213639,67205509,67177582,67175149 67213702,67205563,67177712,67175699 Gene ID= ENSG00000236780.5 TPM= 2.26 Transcript Type= NA chr2 67175149 67215398 67175149 67215398 - transcript1870.chr2.nnic@LINC01829 transcript1870.chr2.nnic lincRNA 67215228,67205509,67177582,67175149 67215398,67205563,67177712,67175699 Gene ID= ENSG00000236780.5 TPM= 2.26 Transcript Type= NA chr2 67397315 67410406 67397315 67410406 + transcript1864.chr2.nnic@ETAA1 transcript1864.chr2.nnic protein_coding 67397315,67399169,67399550,67402862,67403225,67404997,67409911 67397671,67399297,67399626,67402974,67403844,67405335,67410406 Gene ID= ENSG00000143971.7 TPM= 1.81 Transcript Type= NA chr2 67397319 67410545 67397319 67410545 + ENST00000272342.5@ETAA1 ENST00000272342.5 protein_coding 67397319,67399169,67399550,67402862,67403225,67409911 67397671,67399297,67399626,67402974,67405335,67410545 Gene ID= ENSG00000143971.7 TPM= 4.53 Transcript Type= protein_coding chr2 67397315 67410538 67397315 67410538 + transcript1867.chr2.nnic@ETAA1 transcript1867.chr2.nnic protein_coding 67397315,67399169,67399550,67402862,67405236,67409911 67397671,67399297,67399626,67402974,67405335,67410538 Gene ID= ENSG00000143971.7 TPM= 5.43 Transcript Type= NA chr2 68129867 68157534 68129867 68157534 - transcript1877.chr2.nic@WDR92 transcript1877.chr2.nic protein_coding 68157374,68147467,68144585,68141694,68138742,68137299,68134702,68129867 68157534,68147567,68144715,68141795,68138857,68137433,68134799,68131445 Gene ID= ENSG00000243667.6 TPM= 3.17 Transcript Type= NA chr2 68129806 68157527 68129806 68157527 - transcript1879.chr2.nnic@AC017083.4 transcript1879.chr2.nnic protein_coding 68157374,68144585,68141694,68138742,68137299,68134702,68129806 68157527,68144715,68141795,68138857,68137433,68134799,68131445 Gene ID= ENSG00000273398.6 TPM= 2.26 Transcript Type= NA chr2 68157844 68176238 68157844 68176238 + ENST00000263657.6@PNO1 ENST00000263657.6 protein_coding 68157844,68158380,68161683,68162265,68162546,68173347,68174735 68158141,68158529,68161766,68162325,68162663,68173417,68176238 Gene ID= ENSG00000115946.7 TPM= 34.41 Transcript Type= protein_coding chr2 68178857 68252531 68178857 68252531 - ENST00000234310.7@PPP3R1 ENST00000234310.7 protein_coding 68252125,68217092,68188514,68187255,68186468,68178857 68252531,68217131,68188690,68187314,68186652,68181010 Gene ID= ENSG00000221823.10 TPM= 9.96 Transcript Type= protein_coding chr2 68293010 68320006 68293010 68320006 - ENST00000263655.3@CNRIP1 ENST00000263655.3 protein_coding 68319222,68317157,68293010 68320006,68317307,68294026 Gene ID= ENSG00000119865.8 TPM= 17.21 Transcript Type= protein_coding chr2 68467561 68580162 68467561 68580162 + ENST00000303795.8@APLF ENST00000303795.8 protein_coding 68467561,68490190,68502731,68513080,68513548,68526061,68537872,68545187,68567341,68577820 68467827,68490261,68502903,68513227,68513680,68526242,68538227,68545312,68567387,68580162 Gene ID= ENSG00000169621.9 TPM= 1.81 Transcript Type= protein_coding chr2 68679570 68826816 68679570 68826816 + transcript1892.chr2.nic@ARHGAP25 transcript1892.chr2.nic protein_coding 68679570,68710505,68775221,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987 68679729,68710698,68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826816 Gene ID= ENSG00000163219.11 TPM= 1.81 Transcript Type= NA chr2 68774801 68826833 68774801 68826833 + ENST00000409220.5@ARHGAP25 ENST00000409220.5 protein_coding 68774801,68782233,68787840,68807273,68813287,68816289,68817873,68819123,68822340,68825987 68775420,68782320,68787956,68807480,68813419,68816362,68817994,68819319,68822872,68826833 Gene ID= ENSG00000163219.11 TPM= 12.68 Transcript Type= protein_coding chr2 69013178 69249327 69013178 69249327 + ENST00000303714.8@ANTXR1 ENST00000303714.8 protein_coding 69013178,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842,69123017,69124565,69152169,69170248,69181786,69182493,69193335,69245225 69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69102940,69123086,69124643,69152264,69170289,69181881,69182660,69193415,69249327 Gene ID= ENSG00000169604.19 TPM= 15.39 Transcript Type= protein_coding chr2 69013370 69195166 69013370 69195166 + transcript1901.chr2.nic@ANTXR1 transcript1901.chr2.nic protein_coding 69013370,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842,69123017,69124565,69152169,69170248,69181786,69182493,69193335 69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69102940,69123086,69124643,69152264,69170289,69181881,69182660,69195166 Gene ID= ENSG00000169604.19 TPM= 1.81 Transcript Type= NA chr2 69013306 69146401 69013306 69146401 + ENST00000409829.7@ANTXR1 ENST00000409829.7 protein_coding 69013306,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842,69123017,69124565,69145326 69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69102940,69123086,69124643,69146401 Gene ID= ENSG00000169604.19 TPM= 6.34 Transcript Type= protein_coding chr2 69013357 69103432 69013357 69103432 + ENST00000463335.1@ANTXR1 ENST00000463335.1 protein_coding 69013357,69040044,69044742,69070647,69071754,69073022,69075590,69077408,69090859,69102842 69013651,69040115,69044813,69070728,69071787,69073101,69075658,69077488,69090919,69103432 Gene ID= ENSG00000169604.19 TPM= 3.62 Transcript Type= retained_intron chr2 69321672 69387297 69321672 69387297 - transcript1916.chr2.nnic@GFPT1 transcript1916.chr2.nnic protein_coding 69387065,69374006,69370001,69363545,69359268,69358329,69356496,69354489,69350078,69348171,69345904,69342152,69338445,69337898,69329684,69329297,69326914,69321672 69387297,69374113,69370108,69363670,69359326,69358463,69356557,69354568,69350183,69348334,69345999,69342249,69338565,69338055,69329798,69329424,69327075,69326233 Gene ID= ENSG00000198380.12 TPM= 6.34 Transcript Type= NA chr2 69395750 69437628 69395750 69437628 - ENST00000410022.6@NFU1 ENST00000410022.6 protein_coding 69437361,69431902,69423582,69419538,69415185,69406022,69400364,69395750 69437628,69432005,69423717,69419604,69415299,69406082,69400538,69396290 Gene ID= ENSG00000169599.12 TPM= 21.73 Transcript Type= protein_coding chr2 69396115 69437438 69396115 69437438 - transcript1923.chr2.nic@NFU1 transcript1923.chr2.nic protein_coding 69437361,69431902,69419538,69415185,69406022,69400364,69396115 69437438,69432005,69419604,69415299,69406082,69400538,69396290 Gene ID= ENSG00000169599.12 TPM= 1.81 Transcript Type= NA chr2 69464538 69643679 69464538 69643679 - transcript1928.chr2.nnic@AAK1 transcript1928.chr2.nnic protein_coding 69643575,69642878,69556860,69544436,69542523,69532041,69530625,69530008,69527216,69525033,69520834,69518954,69514471,69509231,69507421,69505569,69495985,69464538 69643679,69643276,69556980,69544546,69542665,69532162,69530706,69530140,69527319,69525112,69520988,69519242,69514749,69509460,69507582,69505673,69496083,69466551 Gene ID= ENSG00000115977.18 TPM= 13.88 Transcript Type= NA chr2 69465126 69643679 69465126 69643679 - transcript1930.chr2.nnic@AAK1 transcript1930.chr2.nnic protein_coding 69643575,69642878,69556860,69544436,69542523,69532041,69530625,69530008,69527216,69525033,69520834,69518954,69514471,69509231,69507421,69505569,69465126 69643679,69643276,69556980,69544546,69542665,69532162,69530706,69530140,69527319,69525112,69520988,69519242,69514749,69509460,69507582,69505673,69466551 Gene ID= ENSG00000115977.18 TPM= 13.88 Transcript Type= NA chr2 69555306 69643679 69555306 69643679 - transcript1937.chr2.nnic@AAK1 transcript1937.chr2.nnic protein_coding 69643575,69642878,69555306 69643679,69643276,69556980 Gene ID= ENSG00000115977.18 TPM= 5.73 Transcript Type= NA chr2 69643110 69826468 69643110 69826468 + transcript1932.chr2.nic@ANXA4 transcript1932.chr2.nic protein_coding 69643110,69652998,69720774,69781520,69788054,69804533,69806385,69807906,69810594,69812653,69816101,69818599,69819280,69820699,69825456 69644905,69653282,69720871,69781574,69788141,69804627,69806498,69807996,69810673,69812709,69816194,69818694,69819338,69820821,69826468 Gene ID= ENSG00000196975.15 TPM= 10.87 Transcript Type= NA chr2 69829642 69881396 69829642 69881396 + ENST00000282570.3@GMCL1 ENST00000282570.3 protein_coding 69829642,69837547,69839457,69840942,69843149,69844131,69847543,69849652,69854823,69861278,69864900,69869719,69871745,69878909 69830152,69837670,69839553,69841039,69843261,69844196,69847627,69849742,69854960,69861347,69864975,69869864,69871832,69881396 Gene ID= ENSG00000087338.4 TPM= 46.18 Transcript Type= protein_coding chr2 69893964 69904671 69893964 69904671 + ENST00000450162.6@SNRNP27 ENST00000450162.6 protein_coding 69893964,69895094,69896436,69897377,69903181,69904254,69904512 69894018,69895214,69896548,69897456,69903245,69904425,69904671 Gene ID= ENSG00000124380.10 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr2 69915071 69942945 69915071 69942945 + ENST00000264444.6@MXD1 ENST00000264444.6 protein_coding 69915071,69916121,69921736,69935351,69937235,69938097 69915403,69916220,69921765,69935465,69937394,69942945 Gene ID= ENSG00000059728.10 TPM= 12.68 Transcript Type= protein_coding chr2 69993779 70087013 69993779 70087013 - transcript1949.chr2.nnic@PCBP1-AS1 transcript1949.chr2.nnic processed_transcript 70086882,70085547,70083538,70059643,70051203,70018015,69996686,69993779 70087013,70085624,70083687,70059680,70051305,70018131,69996888,69994250 Gene ID= ENSG00000179818.13 TPM= 1.81 Transcript Type= NA chr2 70124036 70125317 70124036 70125317 - ENST00000414141.1@LINC01816 ENST00000414141.1 lincRNA 70125046,70124036 70125317,70124425 Gene ID= ENSG00000231327.1 TPM= 1.81 Transcript Type= lincRNA chr2 70149881 70190702 70149881 70190702 - transcript1971.chr2.nic@C2orf42 transcript1971.chr2.nic protein_coding 70190543,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149881 70190702,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564 Gene ID= ENSG00000115998.7 TPM= 6.34 Transcript Type= NA chr2 70149881 70190973 70149881 70190973 - transcript1972.chr2.nic@C2orf42 transcript1972.chr2.nic protein_coding 70190691,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149881 70190973,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564 Gene ID= ENSG00000115998.7 TPM= 4.53 Transcript Type= NA chr2 70149880 70191071 70149880 70191071 - ENST00000264434.6@C2orf42 ENST00000264434.6 protein_coding 70190973,70182667,70181163,70179532,70175673,70169557,70165528,70165092,70160625,70149880 70191071,70182935,70181997,70179642,70175777,70169661,70165635,70165192,70160787,70150564 Gene ID= ENSG00000115998.7 TPM= 5.43 Transcript Type= protein_coding chr2 70209446 70248632 70209446 70248632 - transcript1979.chr2.nic@TIA1 transcript1979.chr2.nic protein_coding 70248405,70236079,70230756,70229264,70229059,70228344,70227735,70225328,70224554,70216886,70216404,70216208,70215371,70214349,70209446 70248632,70236175,70230854,70229318,70229091,70228462,70227822,70225393,70224629,70216994,70216499,70216292,70215494,70214494,70212845 Gene ID= ENSG00000116001.15 TPM= 2.04 Transcript Type= NA chr2 70209446 70248633 70209446 70248633 - transcript1982.chr2.nic@TIA1 transcript1982.chr2.nic protein_coding 70248405,70236079,70230756,70229264,70229059,70228344,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70209446 70248633,70236175,70230854,70229318,70229091,70228462,70227822,70224629,70216994,70216499,70216292,70215494,70214494,70212845 Gene ID= ENSG00000116001.15 TPM= 2.04 Transcript Type= NA chr2 70209446 70248659 70209446 70248659 - transcript1983.chr2.nic@TIA1 transcript1983.chr2.nic protein_coding 70248405,70236079,70230756,70229264,70229059,70227735,70224554,70216753,70216404,70216208,70215371,70214349,70209446 70248659,70236175,70230854,70229318,70229091,70227822,70224629,70216994,70216499,70216292,70215494,70214494,70212845 Gene ID= ENSG00000116001.15 TPM= 2.04 Transcript Type= NA chr2 70209446 70248632 70209446 70248632 - transcript1989.chr2.nnic@TIA1 transcript1989.chr2.nnic protein_coding 70248405,70230756,70229264,70229059,70227735,70224554,70216886,70216404,70216208,70215371,70214349,70209446 70248632,70230854,70229318,70229091,70227822,70224629,70216994,70216499,70216292,70215494,70214494,70212845 Gene ID= ENSG00000116001.15 TPM= 2.94 Transcript Type= NA chr2 70258137 70281191 70258137 70281191 + ENST00000433351.6@PCYOX1 ENST00000433351.6 protein_coding 70258137,70259360,70261212,70274959,70275514,70276734 70258276,70259566,70261386,70275170,70275666,70281191 Gene ID= ENSG00000116005.11 TPM= 50.71 Transcript Type= protein_coding chr2 70281362 70293771 70281362 70293771 - ENST00000272348.6@SNRPG ENST00000272348.6 protein_coding 70293618,70289350,70288068,70281362 70293771,70289372,70288192,70281684 Gene ID= ENSG00000143977.13 TPM= 97.8 Transcript Type= protein_coding chr2 70295975 70302113 70295975 70302113 - transcript2001.chr2.nnic@FAM136A transcript2001.chr2.nnic protein_coding 70301925,70301522,70300840,70295975 70302113,70301603,70300980,70297477 Gene ID= ENSG00000035141.7 TPM= 7.24 Transcript Type= NA chr2 70295975 70302090 70295975 70302090 - ENST00000037869.7@FAM136A ENST00000037869.7 protein_coding 70301925,70300840,70295975 70302090,70300980,70297477 Gene ID= ENSG00000035141.7 TPM= 29.88 Transcript Type= protein_coding chr2 70295976 70302056 70295976 70302056 - ENST00000460307.1@FAM136A ENST00000460307.1 protein_coding 70301925,70300840,70295976 70302056,70301603,70297477 Gene ID= ENSG00000035141.7 TPM= 2.72 Transcript Type= retained_intron chr2 70673238 70680707 70673238 70680707 + transcript2005.chr2.nnic@NA transcript2005.chr2.nnic NA 70673238,70678017,70679473 70673379,70678182,70680707 Gene ID= novel_gene_chr2_2006 TPM= 2.72 Transcript Type= NA chr2 70978453 70985950 70978453 70985950 + transcript2008.chr2.nic@ANKRD53 transcript2008.chr2.nic protein_coding 70978453,70979199,70979661,70981936,70982577,70984123,70984611 70978815,70979343,70979860,70982100,70982697,70984249,70985950 Gene ID= ENSG00000144031.11 TPM= 1.81 Transcript Type= NA chr2 70985938 70994945 70985938 70994945 - ENST00000272438.8@TEX261 ENST00000272438.8 protein_coding 70994688,70993696,70991830,70989749,70988915,70985938 70994945,70993775,70991983,70989816,70989017,70988715 Gene ID= ENSG00000144043.11 TPM= 164.36 Transcript Type= protein_coding chr2 71068293 71078643 71068293 71078643 + transcript2017.chr2.nic@NAGK transcript2017.chr2.nic protein_coding 71068293,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318 71068336,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078643 Gene ID= ENSG00000124357.12 TPM= 5.59 Transcript Type= NA chr2 71068597 71078643 71068597 71078643 + transcript2021.chr2.nic@NAGK transcript2021.chr2.nic protein_coding 71068597,71070502,71070741,71071686,71072641,71075555,71076604,71077558,71078318 71068712,71070586,71070839,71071827,71073594,71075642,71076701,71077636,71078643 Gene ID= ENSG00000124357.12 TPM= 2.42 Transcript Type= NA chr2 71068588 71079805 71068588 71079805 + ENST00000418807.7@NAGK ENST00000418807.7 protein_coding 71068588,71070741,71071686,71072641,71073482,71075555,71076604,71077558,71078318 71068712,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71079805 Gene ID= ENSG00000124357.12 TPM= 2.42 Transcript Type= protein_coding chr2 71068619 71078641 71068619 71078641 + ENST00000443938.6@NAGK ENST00000443938.6 protein_coding 71068619,71070502,71070741,71071686,71072641,71073482,71075555,71076604,71077570,71078318 71068712,71070586,71070839,71071827,71072751,71073594,71075642,71076701,71077636,71078641 Gene ID= ENSG00000124357.12 TPM= 2.26 Transcript Type= protein_coding chr2 71068665 71078620 71068665 71078620 + ENST00000472519.5@NAGK ENST00000472519.5 protein_coding 71068665,71070502,71070741,71071686,71072641,71075555,71077558,71078318 71068712,71070586,71070839,71071827,71073594,71076701,71077636,71078620 Gene ID= ENSG00000124357.12 TPM= 1.81 Transcript Type= retained_intron chr2 71109668 71130270 71109668 71130270 - transcript2025.chr2.nic@MCEE transcript2025.chr2.nic protein_coding 71129717,71124206,71109668 71130270,71124543,71110122 Gene ID= ENSG00000124370.10 TPM= 7.24 Transcript Type= NA chr2 71109688 71130270 71109688 71130270 - transcript2027.chr2.nic@MCEE transcript2027.chr2.nic protein_coding 71129717,71124368,71109688 71130270,71124543,71110122 Gene ID= ENSG00000124370.10 TPM= 1.81 Transcript Type= NA chr2 71109688 71130279 71109688 71130279 - transcript2028.chr2.nic@MCEE transcript2028.chr2.nic protein_coding 71130180,71124368,71109688 71130279,71124543,71110122 Gene ID= ENSG00000124370.10 TPM= 4.98 Transcript Type= NA chr2 71109684 71130237 71109684 71130237 - ENST00000244217.5@MCEE ENST00000244217.5 protein_coding 71130180,71124206,71109684 71130237,71124543,71110122 Gene ID= ENSG00000124370.10 TPM= 23.09 Transcript Type= protein_coding chr2 71130314 71150101 71130314 71150101 + ENST00000244230.6@MPHOSPH10 ENST00000244230.6 protein_coding 71130314,71132898,71133948,71134626,71138490,71139795,71141232,71144428,71147999,71149223,71149866 71130754,71133576,71134105,71134797,71138631,71139862,71141369,71144538,71148106,71149453,71150101 Gene ID= ENSG00000124383.8 TPM= 25.36 Transcript Type= protein_coding chr2 71331731 71435060 71331731 71435060 + transcript2030.chr2.nic@ZNF638 transcript2030.chr2.nic protein_coding 71331731,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742 71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435060 Gene ID= ENSG00000075292.18 TPM= 3.62 Transcript Type= NA chr2 71331764 71435061 71331764 71435061 + ENST00000264447.8@ZNF638 ENST00000264447.8 protein_coding 71331764,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742 71331875,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435061 Gene ID= ENSG00000075292.18 TPM= 9.96 Transcript Type= protein_coding chr2 71331764 71435060 71331764 71435060 + transcript2033.chr2.nic@ZNF638 transcript2033.chr2.nic protein_coding 71331764,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71396141,71398701,71399559,71400112,71400478,71401956,71403870,71405601,71406128,71408122,71418602,71422814,71424650,71426460,71428547,71431327,71433165,71434742 71331865,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71396191,71398772,71399645,71400180,71400518,71402087,71403998,71405642,71406262,71408247,71418639,71424038,71424715,71427414,71428651,71431428,71433283,71435060 Gene ID= ENSG00000075292.18 TPM= 4.07 Transcript Type= NA chr2 71331731 71395751 71331731 71395751 + transcript2036.chr2.nic@ZNF638 transcript2036.chr2.nic protein_coding 71331731,71348753,71355719,71363153,71363954,71365429,71368382,71369883,71380222,71380513,71388623,71393394,71395247 71331865,71350271,71355780,71363191,71364252,71365706,71368528,71370005,71380280,71380565,71388723,71393645,71395751 Gene ID= ENSG00000075292.18 TPM= 5.89 Transcript Type= NA chr2 72129238 72148038 72129238 72148038 - ENST00000001146.6@CYP26B1 ENST00000001146.6 protein_coding 72147631,72143989,72135144,72134761,72133023,72129238 72148038,72144213,72135419,72134916,72133307,72132619 Gene ID= ENSG00000003137.8 TPM= 13.58 Transcript Type= protein_coding chr2 72887360 72892158 72887360 72892158 + ENST00000234454.5@SPR ENST00000234454.5 protein_coding 72887360,72888314,72891347 72887736,72888604,72892158 Gene ID= ENSG00000116096.5 TPM= 171.15 Transcript Type= protein_coding chr2 72942034 73071708 72942034 73071708 - transcript2065.chr2.nic@SFXN5 transcript2065.chr2.nic protein_coding 73071604,73058528,73041607,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72942034 73071708,73058596,73041661,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099 Gene ID= ENSG00000144040.12 TPM= 4.98 Transcript Type= NA chr2 72942035 73071709 72942035 73071709 - transcript2068.chr2.nnic@SFXN5 transcript2068.chr2.nnic protein_coding 73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72944846,72942035 73071709,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099,72943904 Gene ID= ENSG00000144040.12 TPM= 3.98 Transcript Type= NA chr2 72942037 73071772 72942037 73071772 - transcript2069.chr2.nnic@SFXN5 transcript2069.chr2.nnic protein_coding 73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72945026,72942037 73071772,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099,72943904 Gene ID= ENSG00000144040.12 TPM= 3.08 Transcript Type= NA chr2 72942034 73071282 72942034 73071282 - transcript2072.chr2.nic@SFXN5 transcript2072.chr2.nic protein_coding 73070460,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72942034 73071282,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099 Gene ID= ENSG00000144040.12 TPM= 9.15 Transcript Type= NA chr2 72942036 73071836 72942036 73071836 - ENST00000272433.6@SFXN5 ENST00000272433.6 protein_coding 73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72942036 73071836,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099 Gene ID= ENSG00000144040.12 TPM= 50.26 Transcript Type= protein_coding chr2 72942034 73071282 72942034 73071282 - transcript2075.chr2.nic@SFXN5 transcript2075.chr2.nic protein_coding 73070460,73058528,73040854,73023188,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72961131,72942034 73071282,73058596,73040931,73023214,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72961248,72945099 Gene ID= ENSG00000144040.12 TPM= 3.71 Transcript Type= NA chr2 72942037 73071709 72942037 73071709 - transcript2079.chr2.nic@SFXN5 transcript2079.chr2.nic protein_coding 73071604,73058528,73040854,73023188,73022522,73020239,73001525,73000431,72998949,72988258,72971570,72968448,72942037 73071709,73058596,73040931,73023214,73022576,73020264,73001578,73000487,72999014,72988348,72971685,72968533,72945099 Gene ID= ENSG00000144040.12 TPM= 3.62 Transcript Type= NA chr2 73073379 73112959 73073379 73112959 - transcript2085.chr2.nnic@RAB11FIP5 transcript2085.chr2.nnic protein_coding 73112347,73088879,73088050,73079651,73075993,73073379 73112959,73089315,73088749,73081345,73076182,73075724 Gene ID= ENSG00000135631.16 TPM= 9.51 Transcript Type= NA chr2 73073382 73113018 73073382 73113018 - ENST00000258098.6@RAB11FIP5 ENST00000258098.6 protein_coding 73112347,73088879,73088050,73075993,73073382 73113018,73089315,73088749,73076182,73075724 Gene ID= ENSG00000135631.16 TPM= 63.84 Transcript Type= protein_coding chr2 73113018 73113630 73113018 73113630 + ENST00000608612.1@AC010913.1 ENST00000608612.1 processed_transcript 73113018,73113400 73113206,73113630 Gene ID= ENSG00000272702.1 TPM= 1.81 Transcript Type= antisense_RNA chr2 73214245 73227235 73214245 73227235 + transcript2089.chr2.nic@SMYD5 transcript2089.chr2.nic protein_coding 73214245,73218861,73219952,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796 73214362,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227235 Gene ID= ENSG00000135632.11 TPM= 2.49 Transcript Type= NA chr2 73214222 73227237 73214222 73227237 + ENST00000389501.8@SMYD5 ENST00000389501.8 protein_coding 73214222,73218861,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796 73214362,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227237 Gene ID= ENSG00000135632.11 TPM= 38.11 Transcript Type= protein_coding chr2 73214538 73227235 73214538 73227235 + transcript2092.chr2.nnic@SMYD5 transcript2092.chr2.nnic protein_coding 73214538,73218861,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796 73214862,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227235 Gene ID= ENSG00000135632.11 TPM= 4.6 Transcript Type= NA chr2 73214587 73227235 73214587 73227235 + transcript2093.chr2.nic@SMYD5 transcript2093.chr2.nic protein_coding 73214587,73218861,73220051,73220661,73221165,73221826,73222755,73223036,73223426,73223947,73224866,73225631,73225796 73214705,73218969,73220190,73220782,73221234,73221930,73222817,73223106,73223532,73224003,73224960,73225701,73227235 Gene ID= ENSG00000135632.11 TPM= 3.69 Transcript Type= NA chr2 73228007 73233239 73228007 73233239 - transcript2108.chr2.nnic@PRADC1 transcript2108.chr2.nnic protein_coding 73233094,73230113,73229472,73228795,73228007 73233239,73230213,73229570,73228962,73228574 Gene ID= ENSG00000135617.3 TPM= 1.81 Transcript Type= NA chr2 73228006 73233228 73228006 73233228 - ENST00000258083.2@PRADC1 ENST00000258083.2 protein_coding 73233094,73230113,73229461,73228795,73228006 73233228,73230213,73229570,73228962,73228574 Gene ID= ENSG00000135617.3 TPM= 50.71 Transcript Type= protein_coding chr2 73234236 73253021 73234236 73253021 + ENST00000540468.5@CCT7 ENST00000540468.5 protein_coding 73234236,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640 73234384,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253021 Gene ID= ENSG00000135624.15 TPM= 4.23 Transcript Type= protein_coding chr2 73234238 73253004 73234238 73253004 + ENST00000258091.9@CCT7 ENST00000258091.9 protein_coding 73234238,73239643,73240437,73243004,73243997,73244544,73247762,73248991,73249819,73250306,73251226,73252640 73234384,73239796,73240543,73243129,73244049,73244715,73247926,73249179,73249916,73250438,73251432,73253004 Gene ID= ENSG00000135624.15 TPM= 358.75 Transcript Type= protein_coding chr2 73234308 73253004 73234308 73253004 + ENST00000398422.2@CCT7 ENST00000398422.2 protein_coding 73234308,73247762,73248991,73249819,73250306,73251226,73252640 73234384,73247926,73249179,73249916,73250438,73251432,73253004 Gene ID= ENSG00000135624.15 TPM= 2.72 Transcript Type= protein_coding chr2 73729830 73737386 73729830 73737386 - ENST00000272424.9@TPRKB ENST00000272424.9 protein_coding 73737302,73734429,73732163,73730560,73729830 73737386,73734591,73732285,73730736,73730029 Gene ID= ENSG00000144034.14 TPM= 18.11 Transcript Type= protein_coding chr2 73730264 73737340 73730264 73737340 - ENST00000497464.5@TPRKB ENST00000497464.5 protein_coding 73737302,73734429,73732163,73730264 73737340,73734591,73732285,73730736 Gene ID= ENSG00000144034.14 TPM= 1.81 Transcript Type= retained_intron chr2 73762184 73780157 73762184 73780157 - ENST00000272444.7@DUSP11 ENST00000272444.7 protein_coding 73779874,73778301,73774913,73773800,73769265,73767161,73766828,73766418,73762184 73780157,73778376,73775044,73773923,73769325,73767207,73766903,73766594,73762859 Gene ID= ENSG00000144048.10 TPM= 19.02 Transcript Type= protein_coding chr2 73828987 73867168 73828987 73867168 + ENST00000394073.5@STAMBP ENST00000394073.5 protein_coding 73828987,73829405,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203 73829070,73829510,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168 Gene ID= ENSG00000124356.15 TPM= 9.06 Transcript Type= protein_coding chr2 73828916 73867168 73828916 73867168 + ENST00000339566.7@STAMBP ENST00000339566.7 protein_coding 73828916,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203 73828996,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73867168 Gene ID= ENSG00000124356.15 TPM= 11.77 Transcript Type= protein_coding chr2 73828969 73862883 73828969 73862883 + transcript2124.chr2.nic@STAMBP transcript2124.chr2.nic protein_coding 73828969,73830845,73844813,73845167,73847387,73849363,73850376,73859254,73860052,73862203 73829070,73831059,73844888,73845262,73847753,73849487,73850513,73859366,73860151,73862883 Gene ID= ENSG00000124356.15 TPM= 2.72 Transcript Type= NA chr2 73892979 73919865 73892979 73919865 + ENST00000345517.7@ACTG2 ENST00000345517.7 protein_coding 73892979,73901276,73902360,73908673,73909055,73913485,73914680,73916584,73919432 73893051,73901437,73902488,73908783,73909139,73913646,73914871,73916765,73919865 Gene ID= ENSG00000163017.13 TPM= 4.53 Transcript Type= protein_coding chr2 73926826 73958961 73926826 73958961 + ENST00000264093.8@DGUOK ENST00000264093.8 protein_coding 73926826,73938910,73946719,73950585,73957125,73958146,73958710 73927052,73939022,73946906,73950732,73957240,73958245,73958961 Gene ID= ENSG00000114956.19 TPM= 28.98 Transcript Type= protein_coding chr2 73926878 73958959 73926878 73958959 + transcript2128.chr2.nnic@DGUOK transcript2128.chr2.nnic protein_coding 73926878,73943172,73946719,73950585,73957125,73958146,73958710 73927052,73943275,73946906,73950732,73957240,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 1.81 Transcript Type= NA chr2 73926829 73958959 73926829 73958959 + transcript2130.chr2.nic@DGUOK transcript2130.chr2.nic protein_coding 73926829,73938910,73946719,73950585,73958146,73958710 73927052,73939022,73946906,73950732,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 2.72 Transcript Type= NA chr2 73926885 73958959 73926885 73958959 + transcript2132.chr2.nic@DGUOK transcript2132.chr2.nic protein_coding 73926885,73946719,73950585,73958146,73958710 73927052,73946906,73950732,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 1.81 Transcript Type= NA chr2 73926826 73958961 73926826 73958961 + ENST00000348222.3@DGUOK ENST00000348222.3 protein_coding 73926826,73938910,73946719,73958146,73958710 73927052,73939022,73946906,73958245,73958961 Gene ID= ENSG00000114956.19 TPM= 6.79 Transcript Type= protein_coding chr2 73926893 73958959 73926893 73958959 + transcript2135.chr2.nnic@DGUOK transcript2135.chr2.nnic protein_coding 73926893,73946719,73958146,73958710 73927052,73946888,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 1.81 Transcript Type= NA chr2 73926821 73958959 73926821 73958959 + transcript2138.chr2.nnic@DGUOK transcript2138.chr2.nnic protein_coding 73926821,73957125,73958146,73958710 73927052,73957240,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 1.81 Transcript Type= NA chr2 73926880 73958959 73926880 73958959 + transcript2139.chr2.nnic@DGUOK transcript2139.chr2.nnic protein_coding 73926880,73958146,73958710 73927052,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 1.81 Transcript Type= NA chr2 73926875 73958946 73926875 73958946 + ENST00000418996.5@DGUOK ENST00000418996.5 protein_coding 73926875,73946719,73958146,73958710 73927052,73946906,73958245,73958946 Gene ID= ENSG00000114956.19 TPM= 18.56 Transcript Type= nonsense_mediated_decay chr2 73926826 73958959 73926826 73958959 + ENST00000629438.2@DGUOK ENST00000629438.2 protein_coding 73926826,73946719,73950585,73957125,73958146,73958710 73927052,73946906,73950732,73957240,73958245,73958959 Gene ID= ENSG00000114956.19 TPM= 17.21 Transcript Type= protein_coding chr2 73957970 73981433 73957970 73981433 - ENST00000439192.1@DGUOK-AS1 ENST00000439192.1 antisense_RNA 73981109,73957970 73981433,73958207 Gene ID= ENSG00000237883.1 TPM= 1.81 Transcript Type= antisense_RNA chr2 74135398 74147994 74135398 74147994 - ENST00000327428.9@BOLA3 ENST00000327428.9 protein_coding 74147821,74145189,74142272,74135398 74147994,74145303,74142360,74135658 Gene ID= ENSG00000163170.11 TPM= 25.36 Transcript Type= protein_coding chr2 74135415 74147905 74135415 74147905 - ENST00000295326.4@BOLA3 ENST00000295326.4 protein_coding 74147821,74145189,74135415 74147905,74145303,74135658 Gene ID= ENSG00000163170.11 TPM= 14.49 Transcript Type= protein_coding chr2 74198613 74217564 74198613 74217564 + transcript2152.chr2.nnic@MTHFD2 transcript2152.chr2.nnic protein_coding 74198613,74201382,74205705,74207704,74208569,74209942,74211199,74211741,74214079 74198742,74201479,74205889,74207826,74208721,74210049,74211291,74211866,74217564 Gene ID= ENSG00000065911.11 TPM= 3.62 Transcript Type= NA chr2 74198562 74217565 74198562 74217565 + ENST00000394053.6@MTHFD2 ENST00000394053.6 protein_coding 74198562,74205705,74207704,74208569,74209942,74211199,74211741,74214079 74198742,74205889,74207826,74208721,74210049,74211291,74211866,74217565 Gene ID= ENSG00000065911.11 TPM= 8.15 Transcript Type= protein_coding chr2 74361154 74380355 74361154 74380355 - ENST00000394003.7@DCTN1 ENST00000394003.7 protein_coding 74380005,74378000,74377648,74377432,74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363614,74363294,74362994,74362650,74362052,74361154 74380355,74378245,74377726,74377466,74374340,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363628,74363427,74363177,74362729,74362141,74361636 Gene ID= ENSG00000204843.12 TPM= 6.57 Transcript Type= protein_coding chr2 74361157 74392087 74361157 74392087 - ENST00000409240.5@DCTN1 ENST00000409240.5 protein_coding 74391794,74378000,74377648,74377432,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157 74392087,74378245,74377726,74377466,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636 Gene ID= ENSG00000204843.12 TPM= 292.4 Transcript Type= protein_coding chr2 74361157 74374735 74361157 74374735 - ENST00000409438.5@DCTN1 ENST00000409438.5 protein_coding 74374323,74372928,74371537,74370979,74370621,74370466,74370186,74369965,74369300,74369098,74368728,74367971,74367696,74367352,74367045,74366783,74366459,74366244,74365893,74365515,74365075,74363294,74362994,74362650,74362052,74361157 74374735,74372948,74371728,74371176,74370825,74370544,74370345,74370069,74369491,74369214,74368880,74368131,74367864,74367420,74367107,74366932,74366620,74366375,74366018,74365657,74365241,74363427,74363177,74362729,74362141,74361636 Gene ID= ENSG00000204843.12 TPM= 16.66 Transcript Type= protein_coding chr2 74421745 74425755 74421745 74425755 + transcript2191.chr2.nic@WDR54 transcript2191.chr2.nic protein_coding 74421745,74423319,74423478,74423855,74424875,74425075,74425417,74425570 74422932,74423385,74423531,74423982,74424975,74425237,74425491,74425755 Gene ID= ENSG00000005448.16 TPM= 1.81 Transcript Type= NA chr2 74421730 74425755 74421730 74425755 + ENST00000348227.4@WDR54 ENST00000348227.4 protein_coding 74421730,74422153,74422870,74423319,74423478,74423855,74424875,74425075,74425417,74425570 74421816,74422375,74422932,74423385,74423531,74423982,74424975,74425237,74425491,74425755 Gene ID= ENSG00000005448.16 TPM= 28.07 Transcript Type= protein_coding chr2 74425884 74440578 74425884 74440578 - transcript2183.chr2.nnic@RTKN transcript2183.chr2.nnic protein_coding 74440353,74432490,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425884 74440578,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574 Gene ID= ENSG00000114993.16 TPM= 1.81 Transcript Type= NA chr2 74425878 74440578 74425878 74440578 - transcript2190.chr2.nic@RTKN transcript2190.chr2.nic protein_coding 74440353,74432467,74430616,74430465,74430252,74429828,74428848,74427424,74427169,74425878 74440578,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74427273,74426574 Gene ID= ENSG00000114993.16 TPM= 1.81 Transcript Type= NA chr2 74425836 74440583 74425836 74440583 - ENST00000305557.9@RTKN ENST00000305557.9 protein_coding 74440353,74439551,74432467,74430616,74430465,74430252,74429828,74428848,74428631,74428268,74427424,74427169,74425836 74440583,74439977,74432666,74430677,74430518,74430369,74430037,74428942,74428737,74428396,74427592,74427273,74426574 Gene ID= ENSG00000114993.16 TPM= 9.96 Transcript Type= protein_coding chr2 74455023 74457960 74455023 74457960 + ENST00000233331.11@INO80B ENST00000233331.11 protein_coding 74455023,74455406,74455818,74456103,74457334 74455174,74455598,74455936,74456272,74457960 Gene ID= ENSG00000115274.14 TPM= 28.98 Transcript Type= protein_coding chr2 74458329 74460891 74458329 74460891 + ENST00000233615.6@WBP1 ENST00000233615.6 protein_coding 74458329,74459643,74459873,74460221 74458671,74459745,74460049,74460891 Gene ID= ENSG00000239779.6 TPM= 82.18 Transcript Type= protein_coding chr2 74458400 74460891 74458400 74460891 + ENST00000393972.7@WBP1 ENST00000393972.7 protein_coding 74458400,74458997,74459643,74459873,74460221 74458671,74459098,74459745,74460049,74460891 Gene ID= ENSG00000239779.6 TPM= 8.83 Transcript Type= protein_coding chr2 74461058 74465410 74461058 74465410 - ENST00000452063.6@MOGS ENST00000452063.6 protein_coding 74465314,74464896,74464496,74463190,74461058 74465410,74464987,74464722,74463386,74463012 Gene ID= ENSG00000115275.11 TPM= 2.64 Transcript Type= protein_coding chr2 74461060 74465413 74461060 74465413 - transcript2227.chr2.nic@MOGS transcript2227.chr2.nic protein_coding 74464896,74464496,74463190,74461060 74465413,74464722,74463386,74462834 Gene ID= ENSG00000115275.11 TPM= 4.3 Transcript Type= NA chr2 74461058 74465403 74461058 74465403 - transcript2231.chr2.nnic@MOGS transcript2231.chr2.nnic protein_coding 74464896,74463190,74461058 74465403,74463386,74463012 Gene ID= ENSG00000115275.11 TPM= 5.81 Transcript Type= NA chr2 74461057 74465410 74461057 74465410 - ENST00000233616.8@MOGS ENST00000233616.8 protein_coding 74464896,74464496,74463190,74461057 74465410,74464722,74463386,74463012 Gene ID= ENSG00000115275.11 TPM= 52.45 Transcript Type= protein_coding chr2 74471946 74483028 74471946 74483028 - transcript2238.chr2.nnic@CCDC142 transcript2238.chr2.nnic protein_coding 74481817,74481452,74481223,74480956,74480769,74475612,74475225,74474916,74474698,74472569,74472358,74471946 74483028,74481538,74481372,74481086,74480882,74475726,74475402,74475115,74474802,74472796,74472470,74472252 Gene ID= ENSG00000135637.13 TPM= 58.86 Transcript Type= NA chr2 74471946 74483028 74471946 74483028 - transcript2241.chr2.nic@CCDC142 transcript2241.chr2.nic protein_coding 74481817,74481452,74481223,74480956,74480769,74475612,74475225,74474916,74472569,74472358,74471946 74483028,74481538,74481372,74481065,74480882,74475726,74475402,74475115,74474802,74472470,74472252 Gene ID= ENSG00000135637.13 TPM= 59.77 Transcript Type= NA chr2 74471986 74472687 74471986 74472687 - ENST00000409710.1@MRPL53 ENST00000409710.1 protein_coding 74472569,74471986 74472687,74472252 Gene ID= ENSG00000204822.6 TPM= 2.11 Transcript Type= protein_coding chr2 74471992 74472547 74471992 74472547 - ENST00000467349.1@MRPL53 ENST00000467349.1 protein_coding 74472358,74471992 74472547,74472252 Gene ID= ENSG00000204822.6 TPM= 1.2 Transcript Type= retained_intron chr2 74471993 74472664 74471993 74472664 - ENST00000468875.1@MRPL53 ENST00000468875.1 protein_coding 74472569,74471993 74472664,74472470 Gene ID= ENSG00000204822.6 TPM= 2.11 Transcript Type= retained_intron chr2 74483074 74494558 74483074 74494558 + transcript2235.chr2.nic@TTC31 transcript2235.chr2.nic protein_coding 74483074,74483322,74490025,74490244,74490656,74491128,74491295,74491481,74492004,74492139,74492304,74492646,74492922 74483135,74483410,74490127,74490473,74490739,74491184,74491375,74491666,74492055,74492229,74492445,74492747,74494558 Gene ID= ENSG00000115282.19 TPM= 9.96 Transcript Type= NA chr2 74505043 74508580 74505043 74508580 - ENST00000233630.10@PCGF1 ENST00000233630.10 protein_coding 74507576,74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043 74508580,74507147,74506884,74506252,74506057,74505770,74505638,74505419,74505190 Gene ID= ENSG00000115289.13 TPM= 9.96 Transcript Type= protein_coding chr2 74505043 74507416 74505043 74507416 - ENST00000475863.5@PCGF1 ENST00000475863.5 protein_coding 74507042,74506732,74506181,74505952,74505737,74505552,74505339,74505043 74507416,74506884,74506252,74506057,74505770,74505638,74505419,74505190 Gene ID= ENSG00000115289.13 TPM= 1.81 Transcript Type= retained_intron chr2 74526652 74529697 74526652 74529697 - ENST00000463900.5@AUP1 ENST00000463900.5 protein_coding 74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526652 74529697,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527059,74526836 Gene ID= ENSG00000115307.16 TPM= 26.26 Transcript Type= retained_intron chr2 74526645 74529760 74526645 74529760 - ENST00000425118.5@AUP1 ENST00000425118.5 protein_coding 74529580,74529362,74529132,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526645 74529760,74529499,74529282,74528935,74528489,74528321,74528006,74527838,74527590,74527363,74527121,74526836 Gene ID= ENSG00000115307.16 TPM= 3.92 Transcript Type= nonsense_mediated_decay chr2 74526689 74529685 74526689 74529685 - ENST00000466894.5@AUP1 ENST00000466894.5 protein_coding 74529580,74529362,74528751,74528417,74528248,74527940,74527736,74527471,74527248,74526941,74526689 74529685,74529499,74529282,74528489,74528321,74528006,74527838,74527590,74527363,74527121,74526836 Gene ID= ENSG00000115307.16 TPM= 4.53 Transcript Type= retained_intron chr2 74529918 74533350 74529918 74533350 + transcript2300.chr2.nic@HTRA2 transcript2300.chr2.nic protein_coding 74529918,74530617,74530911,74531856,74532619,74532820 74530512,74530821,74531702,74531925,74532714,74533350 Gene ID= ENSG00000115317.11 TPM= 3.62 Transcript Type= NA chr2 74529377 74533348 74529377 74533348 + ENST00000258080.7@HTRA2 ENST00000258080.7 protein_coding 74529377,74530617,74530911,74531339,74531597,74531856,74532619,74532820 74530512,74530821,74531105,74531371,74531702,74531925,74532714,74533348 Gene ID= ENSG00000115317.11 TPM= 91.46 Transcript Type= protein_coding chr2 74530046 74533192 74530046 74533192 + ENST00000437202.1@HTRA2 ENST00000437202.1 protein_coding 74530046,74530617,74530911,74531339,74531567,74531856,74532820 74530512,74530821,74531105,74531371,74531702,74531925,74533192 Gene ID= ENSG00000115317.11 TPM= 1.81 Transcript Type= protein_coding chr2 74532577 74553943 74532577 74553943 - transcript2265.chr2.nnic@LOXL3 transcript2265.chr2.nnic protein_coding 74553876,74552322,74550183,74549369,74536707,74536291,74535996,74535588,74535292,74534531,74534316,74534100,74533882,74532577 74553943,74552650,74550350,74549583,74536928,74536471,74536150,74535757,74535454,74534774,74534433,74534236,74533995,74533679 Gene ID= ENSG00000115318.11 TPM= 16.3 Transcript Type= NA chr2 74554086 74557554 74554086 74557554 + ENST00000233668.9@DOK1 ENST00000233668.9 protein_coding 74554086,74555154,74555575,74555894,74556308 74554814,74555453,74555668,74556078,74557554 Gene ID= ENSG00000115325.13 TPM= 29.43 Transcript Type= protein_coding chr2 74554733 74557546 74554733 74557546 + transcript2311.chr2.nic@DOK1 transcript2311.chr2.nic protein_coding 74554733,74555154,74555575 74554814,74555453,74557546 Gene ID= ENSG00000115325.13 TPM= 3.62 Transcript Type= NA chr2 74554731 74557551 74554731 74557551 + ENST00000340004.6@DOK1 ENST00000340004.6 protein_coding 74554731,74555154,74555575,74556308 74554814,74555453,74555668,74557551 Gene ID= ENSG00000115325.13 TPM= 1.36 Transcript Type= protein_coding chr2 74654228 74682059 74654228 74682059 + ENST00000357877.6@SEMA4F ENST00000357877.6 protein_coding 74654228,74656534,74657565,74657853,74662732,74673457,74673677,74674498,74674888,74675162,74675525,74675749,74679276,74679599 74654521,74656685,74657624,74657951,74662825,74673576,74673828,74674676,74675035,74675384,74675634,74675909,74679334,74682059 Gene ID= ENSG00000135622.12 TPM= 3.17 Transcript Type= protein_coding chr2 74654228 74683853 74654228 74683853 + ENST00000611975.4@SEMA4F ENST00000611975.4 protein_coding 74654228,74656534,74657565,74662732,74673457,74673677,74674498,74674888,74675162,74675525,74675749,74679276,74679599 74654521,74656685,74657624,74662825,74673576,74673828,74674676,74675035,74675384,74675634,74675909,74679334,74683853 Gene ID= ENSG00000135622.12 TPM= 3.17 Transcript Type= protein_coding chr2 74833981 74893359 74833981 74893359 + ENST00000290573.6@HK2 ENST00000290573.6 protein_coding 74833981,74854293,74867636,74872300,74873276,74873844,74874266,74877166,74878688,74880265,74881711,74882120,74885494,74886294,74886490,74887903,74889245,74890797 74834643,74854455,74867784,74872419,74873371,74873943,74874449,74877321,74878921,74880569,74881859,74882239,74885589,74886393,74886673,74888058,74889478,74893359 Gene ID= ENSG00000159399.9 TPM= 8.15 Transcript Type= protein_coding chr2 74958492 74970128 74958492 74970128 + ENST00000483063.1@POLE4 ENST00000483063.1 protein_coding 74958492,74959341,74960105,74969409 74958892,74959425,74960146,74970128 Gene ID= ENSG00000115350.11 TPM= 36.22 Transcript Type= protein_coding chr2 75646783 75657860 75646783 75657860 + ENST00000393909.6@MRPL19 ENST00000393909.6 protein_coding 75646783,75647102,75652142,75652523,75654736,75655064 75646910,75647219,75652260,75652657,75654917,75657860 Gene ID= ENSG00000115364.13 TPM= 46.18 Transcript Type= protein_coding chr2 75662706 75710989 75662706 75710989 - ENST00000321027.7@GCFC2 ENST00000321027.7 protein_coding 75710591,75706523,75702199,75701190,75696200,75694241,75691977,75690638,75689969,75689026,75687827,75680193,75673444,75671950,75670138,75665929,75662706 75710989,75706651,75702423,75701287,75696315,75694427,75692100,75690719,75690081,75689225,75687977,75680314,75673520,75672016,75670284,75666053,75664783 Gene ID= ENSG00000005436.13 TPM= 9.06 Transcript Type= protein_coding chr2 75701796 75710899 75701796 75710899 - ENST00000470503.1@GCFC2 ENST00000470503.1 protein_coding 75710591,75706523,75701796 75710899,75706651,75702423 Gene ID= ENSG00000005436.13 TPM= 1.81 Transcript Type= protein_coding chr2 79025686 79028505 79025686 79028505 + ENST00000393897.6@REG3G ENST00000393897.6 protein_coding 79025686,79026083,79026713,79027034,79027807,79028209 79025773,79026169,79026831,79027171,79027933,79028505 Gene ID= ENSG00000143954.12 TPM= 3.62 Transcript Type= protein_coding chr2 79025701 79028502 79025701 79028502 + ENST00000272324.9@REG3G ENST00000272324.9 protein_coding 79025701,79025983,79026713,79027034,79027807,79028209 79025773,79026169,79026831,79027171,79027933,79028502 Gene ID= ENSG00000143954.12 TPM= 3.62 Transcript Type= protein_coding chr2 84423523 84459480 84423523 84459480 - ENST00000393868.6@SUCLG1 ENST00000393868.6 protein_coding 84459173,84449649,84443284,84441247,84441047,84433352,84431508,84425415,84423523 84459480,84449752,84443400,84441459,84441104,84433435,84431659,84425603,84423772 Gene ID= ENSG00000163541.11 TPM= 137.64 Transcript Type= protein_coding chr2 84905625 84906675 84905625 84906675 + ENST00000233143.5@TMSB10 ENST00000233143.5 protein_coding 84905625,84906003,84906389 84905718,84906117,84906675 Gene ID= ENSG00000034510.5 TPM= 923.66 Transcript Type= protein_coding chr2 85133410 85310388 85133410 85310388 + ENST00000282111.3@TCF7L1 ENST00000282111.3 protein_coding 85133410,85134016,85134323,85283495,85302484,85303895,85304255,85305260,85306206,85306452,85307642,85309029 85133933,85134079,85134450,85283578,85302616,85303997,85304338,85305403,85306365,85306559,85307717,85310388 Gene ID= ENSG00000152284.4 TPM= 6.34 Transcript Type= protein_coding chr2 85318036 85327996 85318036 85327996 - transcript2366.chr2.nnic@TGOLN2 transcript2366.chr2.nnic protein_coding 85327917,85326508,85324915,85321847,85318036 85327996,85327685,85324998,85322741,85321106 Gene ID= ENSG00000152291.13 TPM= 22.64 Transcript Type= NA chr2 85318024 85328425 85318024 85328425 - ENST00000377386.7@TGOLN2 ENST00000377386.7 protein_coding 85327917,85326508,85324915,85318024 85328425,85327685,85324998,85322741 Gene ID= ENSG00000152291.13 TPM= 37.13 Transcript Type= protein_coding chr2 85341945 85354666 85341945 85354666 - transcript2373.chr2.nic@RETSAT transcript2373.chr2.nic protein_coding 85354336,85350780,85350040,85349384,85345975,85344594,85344239,85343999,85343639,85341945 85354666,85351021,85350241,85349581,85346094,85344732,85344348,85344165,85343798,85343381 Gene ID= ENSG00000042445.13 TPM= 11.32 Transcript Type= NA chr2 85342088 85354620 85342088 85354620 - ENST00000295802.8@RETSAT ENST00000295802.8 protein_coding 85354336,85351680,85350780,85350040,85349384,85345975,85344594,85344239,85343999,85343639,85342088 85354620,85351862,85351021,85350241,85349581,85346094,85344732,85344348,85344165,85343798,85343381 Gene ID= ENSG00000042445.13 TPM= 205.11 Transcript Type= protein_coding chr2 85354726 85391754 85354726 85391754 + transcript2381.chr2.nic@ELMOD3 transcript2381.chr2.nic protein_coding 85354726,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355170,85355716,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391754 Gene ID= ENSG00000115459.17 TPM= 2.15 Transcript Type= NA chr2 85354734 85391754 85354734 85391754 + transcript2384.chr2.nnic@ELMOD3 transcript2384.chr2.nnic protein_coding 85354734,85355555,85356446,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355896,85356533,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391754 Gene ID= ENSG00000115459.17 TPM= 2.15 Transcript Type= NA chr2 85354726 85391754 85354726 85391754 + transcript2385.chr2.nic@ELMOD3 transcript2385.chr2.nic protein_coding 85354726,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85377344,85389751,85390138,85390760 85354829,85355170,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85377474,85389827,85390265,85391754 Gene ID= ENSG00000115459.17 TPM= 2.01 Transcript Type= NA chr2 85354734 85391754 85354734 85391754 + transcript2392.chr2.nic@ELMOD3 transcript2392.chr2.nic protein_coding 85354734,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391754 Gene ID= ENSG00000115459.17 TPM= 2.15 Transcript Type= NA chr2 85354734 85391754 85354734 85391754 + transcript2393.chr2.nic@ELMOD3 transcript2393.chr2.nic protein_coding 85354734,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355896,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391754 Gene ID= ENSG00000115459.17 TPM= 3.05 Transcript Type= NA chr2 85354731 85391754 85354731 85391754 + transcript2400.chr2.nic@ELMOD3 transcript2400.chr2.nic protein_coding 85354731,85356967,85362186,85363097,85368686,85369739,85371086,85377344,85389751,85390138,85390760 85354829,85357252,85362260,85363166,85368754,85369830,85371209,85377474,85389827,85390265,85391754 Gene ID= ENSG00000115459.17 TPM= 2.01 Transcript Type= NA chr2 85354757 85391748 85354757 85391748 + ENST00000393852.8@ELMOD3 ENST00000393852.8 protein_coding 85354757,85355076,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355170,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748 Gene ID= ENSG00000115459.17 TPM= 7.58 Transcript Type= protein_coding chr2 85354720 85391748 85354720 85391748 + ENST00000409013.7@ELMOD3 ENST00000409013.7 protein_coding 85354720,85355076,85355555,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355170,85355598,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748 Gene ID= ENSG00000115459.17 TPM= 10.3 Transcript Type= protein_coding chr2 85354753 85391748 85354753 85391748 + ENST00000409344.7@ELMOD3 ENST00000409344.7 protein_coding 85354753,85355076,85355555,85356602,85356967,85362186,85363097,85368686,85369739,85371086,85371440,85377344,85389751,85390138,85390760 85354829,85355170,85355716,85356667,85357252,85362260,85363166,85368754,85369830,85371209,85371562,85377474,85389827,85390265,85391748 Gene ID= ENSG00000115459.17 TPM= 1.24 Transcript Type= protein_coding chr2 85394748 85410553 85394748 85410553 - ENST00000263867.8@CAPG ENST00000263867.8 protein_coding 85410317,85402123,85401785,85401529,85401165,85399136,85398690,85398020,85395538,85394748 85410553,85402158,85401957,85401683,85401329,85399285,85398782,85398152,85395626,85394958 Gene ID= ENSG00000042493.15 TPM= 19.92 Transcript Type= protein_coding chr2 85539147 85545279 85539147 85545279 + transcript2420.chr2.nic@MAT2A transcript2420.chr2.nic protein_coding 85539147,85541083,85541255,85541633,85541829,85542155,85542565,85542901 85539378,85541160,85541377,85541745,85541972,85542373,85542747,85545279 Gene ID= ENSG00000168906.12 TPM= 22.48 Transcript Type= NA chr2 85539165 85545280 85539165 85545280 + ENST00000306434.7@MAT2A ENST00000306434.7 protein_coding 85539165,85541083,85541255,85541633,85541829,85542155,85542565,85542901,85543670 85539378,85541160,85541377,85541745,85541972,85542373,85542747,85543034,85545280 Gene ID= ENSG00000168906.12 TPM= 162.39 Transcript Type= protein_coding chr2 85544723 85561509 85544723 85561509 - ENST00000233838.8@GGCX ENST00000233838.8 protein_coding 85561386,85560815,85558917,85558440,85556182,85555484,85554143,85553232,85552939,85552416,85551812,85551480,85550925,85550555,85544723 85561509,85560985,85559075,85558605,85556260,85555590,85554306,85553497,85553070,85552567,85551981,85551610,85551072,85550750,85550126 Gene ID= ENSG00000115486.11 TPM= 47.09 Transcript Type= protein_coding chr2 85549830 85561532 85549830 85561532 - ENST00000430215.7@GGCX ENST00000430215.7 protein_coding 85561386,85558917,85558440,85556182,85555484,85554143,85553232,85552939,85552416,85551812,85551480,85550925,85550555,85549830 85561532,85559075,85558605,85556260,85555590,85554306,85553497,85553070,85552567,85551981,85551610,85551072,85550750,85550126 Gene ID= ENSG00000115486.11 TPM= 1.81 Transcript Type= protein_coding chr2 85558725 85561547 85558725 85561547 - ENST00000496962.1@GGCX ENST00000496962.1 protein_coding 85561386,85560815,85558725 85561547,85560985,85559075 Gene ID= ENSG00000115486.11 TPM= 2.72 Transcript Type= processed_transcript chr2 85577491 85582031 85577491 85582031 + ENST00000263864.9@VAMP8 ENST00000263864.9 protein_coding 85577491,85579009,85581576 85577649,85579167,85582031 Gene ID= ENSG00000118640.10 TPM= 28.98 Transcript Type= protein_coding chr2 85561562 85581997 85561562 85581997 + ENST00000432071.1@VAMP8 ENST00000432071.1 protein_coding 85561562,85579009,85581576 85561644,85579167,85581997 Gene ID= ENSG00000118640.10 TPM= 1.81 Transcript Type= protein_coding chr2 85584408 85593412 85584408 85593412 + ENST00000306384.4@VAMP5 ENST00000306384.4 protein_coding 85584408,85591725,85592948 85584493,85591862,85593412 Gene ID= ENSG00000168899.4 TPM= 92.37 Transcript Type= protein_coding chr2 85595734 85597581 85595734 85597581 + ENST00000306368.8@RNF181 ENST00000306368.8 protein_coding 85595734,85596519,85596822,85597104,85597445 85595849,85596649,85596931,85597178,85597581 Gene ID= ENSG00000168894.9 TPM= 87.39 Transcript Type= protein_coding chr2 85595756 85597604 85595756 85597604 + ENST00000443647.5@RNF181 ENST00000443647.5 protein_coding 85595756,85596519,85596857,85597104,85597445 85595849,85596649,85596931,85597178,85597604 Gene ID= ENSG00000168894.9 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr2 85598547 85602394 85598547 85602394 - transcript2444.chr2.nnic@TMEM150A transcript2444.chr2.nnic protein_coding 85602296,85601884,85601435,85601021,85600345,85599891,85599525,85598547 85602394,85602064,85601482,85601107,85600412,85600018,85599702,85599317 Gene ID= ENSG00000168890.13 TPM= 6.34 Transcript Type= NA chr2 85598547 85602415 85598547 85602415 - transcript2453.chr2.nic@TMEM150A transcript2453.chr2.nic protein_coding 85601884,85601021,85600345,85599891,85599525,85598547 85602415,85601482,85600412,85600018,85599702,85599317 Gene ID= ENSG00000168890.13 TPM= 2.72 Transcript Type= NA chr2 85598562 85602678 85598562 85602678 - ENST00000334462.9@TMEM150A ENST00000334462.9 protein_coding 85602607,85601884,85601435,85601021,85600345,85599891,85599525,85598562 85602678,85602064,85601482,85601107,85600412,85600018,85599702,85599317 Gene ID= ENSG00000168890.13 TPM= 13.58 Transcript Type= protein_coding chr2 85598584 85602416 85598584 85602416 - ENST00000409668.1@TMEM150A ENST00000409668.1 protein_coding 85601884,85601435,85601021,85600345,85599891,85599525,85598584 85602416,85601482,85601107,85600412,85600018,85599702,85599317 Gene ID= ENSG00000168890.13 TPM= 12.68 Transcript Type= protein_coding chr2 85616145 85649285 85616145 85649285 + transcript2434.chr2.nic@USP39 transcript2434.chr2.nic protein_coding 85616145,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85645814,85647930,85648761 85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85645899,85648016,85649285 Gene ID= ENSG00000168883.19 TPM= 2.72 Transcript Type= NA chr2 85602443 85649285 85602443 85649285 + transcript2436.chr2.nic@USP39 transcript2436.chr2.nic protein_coding 85602443,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761 85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649285 Gene ID= ENSG00000168883.19 TPM= 11.47 Transcript Type= NA chr2 85616246 85649285 85616246 85649285 + transcript2438.chr2.nic@USP39 transcript2438.chr2.nic protein_coding 85616246,85619220,85621485,85623626,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761 85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649285 Gene ID= ENSG00000168883.19 TPM= 2.42 Transcript Type= NA chr2 85602856 85649280 85602856 85649280 + ENST00000459775.5@USP39 ENST00000459775.5 protein_coding 85602856,85619220,85621485,85623626,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761 85603081,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649280 Gene ID= ENSG00000168883.19 TPM= 9.96 Transcript Type= processed_transcript chr2 85612103 85649282 85612103 85649282 + ENST00000613444.4@USP39 ENST00000613444.4 protein_coding 85612103,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761 85612359,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649282 Gene ID= ENSG00000168883.19 TPM= 1.51 Transcript Type= protein_coding chr2 85616186 85649277 85616186 85649277 + ENST00000323701.10@USP39 ENST00000323701.10 protein_coding 85616186,85619220,85621485,85623646,85625539,85630721,85636053,85637369,85639203,85640976,85644948,85647930,85648761 85616463,85619289,85621579,85623782,85625691,85630946,85636130,85637436,85639391,85641118,85645083,85648016,85649277 Gene ID= ENSG00000168883.19 TPM= 51.62 Transcript Type= protein_coding chr2 85606654 85612029 85606654 85612029 - ENST00000306336.5@C2orf68 ENST00000306336.5 protein_coding 85611878,85611668,85609435,85606654 85612029,85611786,85609586,85609067 Gene ID= ENSG00000168887.10 TPM= 48.9 Transcript Type= protein_coding chr2 85837120 85889055 85837120 85889055 - ENST00000638572.1@ST3GAL5 ENST00000638572.1 protein_coding 85888824,85863362,85861181,85847861,85846377,85844396,85837120 85889055,85863485,85861292,85848204,85846563,85844554,85840392 Gene ID= ENSG00000115525.17 TPM= 85.76 Transcript Type= protein_coding chr2 85839169 85888958 85839169 85888958 - ENST00000377332.8@ST3GAL5 ENST00000377332.8 protein_coding 85888824,85863362,85861181,85847861,85846377,85844396,85839169 85888958,85863485,85861292,85848084,85846563,85844554,85840392 Gene ID= ENSG00000115525.17 TPM= 3.28 Transcript Type= protein_coding chr2 85839194 85889000 85839194 85889000 - ENST00000638227.1@ST3GAL5 ENST00000638227.1 protein_coding 85888824,85870072,85863362,85861181,85847861,85846377,85844396,85839194 85889000,85870258,85863485,85861292,85848204,85846563,85844554,85840392 Gene ID= ENSG00000115525.17 TPM= 10.07 Transcript Type= nonsense_mediated_decay chr2 85839169 85888963 85839169 85888963 - ENST00000639119.1@ST3GAL5 ENST00000639119.1 protein_coding 85888824,85863362,85861181,85847861,85846377,85839169 85888963,85863485,85861292,85848204,85846563,85840392 Gene ID= ENSG00000115525.17 TPM= 2.37 Transcript Type= protein_coding chr2 85839196 85888967 85839196 85888967 - ENST00000640024.1@ST3GAL5 ENST00000640024.1 protein_coding 85888824,85863362,85861181,85852860,85851264,85847861,85846377,85844396,85839196 85888967,85863485,85861292,85853000,85851703,85848204,85846563,85844554,85840392 Gene ID= ENSG00000115525.17 TPM= 2.83 Transcript Type= nonsense_mediated_decay chr2 86020216 86106155 86020216 86106155 - ENST00000263857.10@POLR1A ENST00000263857.10 protein_coding 86105700,86099968,86098611,86089822,86088785,86088566,86083082,86081601,86080816,86078114,86077859,86075030,86070018,86065274,86054140,86052817,86049160,86048884,86047165,86045617,86045278,86044139,86042974,86041889,86040392,86039327,86038700,86033661,86032272,86031330,86030196,86028594,86027885,86020216 86106155,86100172,86098760,86089929,86088870,86088669,86083168,86081706,86080978,86078284,86077981,86075260,86070272,86065465,86054289,86053000,86049242,86049042,86047263,86045769,86045360,86044304,86043195,86042103,86040559,86039462,86038857,86033787,86032382,86031635,86030396,86028711,86028049,86027523 Gene ID= ENSG00000068654.15 TPM= 9.06 Transcript Type= protein_coding chr2 86106182 86142157 86106182 86142157 + ENST00000254630.11@PTCD3 ENST00000254630.11 protein_coding 86106182,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521,86136982,86137469 86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136562,86137140,86142157 Gene ID= ENSG00000132300.18 TPM= 105.88 Transcript Type= protein_coding chr2 86106223 86136878 86106223 86136878 + transcript2511.chr2.nic@PTCD3 transcript2511.chr2.nic protein_coding 86106223,86108350,86108500,86111113,86116530,86117055,86118921,86121479,86123701,86124995,86125455,86125795,86127161,86127941,86130648,86131078,86132318,86133178,86133346,86134292,86134839,86136521 86106351,86108402,86108536,86111158,86116598,86117159,86119044,86121594,86123762,86125082,86125515,86125880,86127305,86127991,86130737,86131106,86132424,86133256,86133436,86134377,86134987,86136878 Gene ID= ENSG00000132300.18 TPM= 11.09 Transcript Type= NA chr2 86143932 86195770 86143932 86195770 - ENST00000410111.7@IMMT ENST00000410111.7 protein_coding 86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932 86195770,86181372,86179622,86173761,86171345,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881 Gene ID= ENSG00000132305.20 TPM= 75.01 Transcript Type= protein_coding chr2 86143932 86195472 86143932 86195472 - ENST00000449247.6@IMMT ENST00000449247.6 protein_coding 86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143932 86195472,86181372,86179622,86173761,86171312,86170844,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881 Gene ID= ENSG00000132305.20 TPM= 232.57 Transcript Type= protein_coding chr2 86143936 86195403 86143936 86195403 - ENST00000442664.6@IMMT ENST00000442664.6 protein_coding 86195338,86181299,86179433,86173650,86171208,86170749,86166508,86161976,86159536,86158592,86153560,86151297,86147702,86146068,86143936 86195403,86181372,86179622,86173761,86171345,86170841,86166644,86162079,86159671,86158721,86153574,86151520,86147833,86146197,86144881 Gene ID= ENSG00000132305.20 TPM= 2.56 Transcript Type= protein_coding chr2 86199457 86213794 86199457 86213794 + ENST00000337109.8@MRPL35 ENST00000337109.8 protein_coding 86199457,86206106,86207183,86210480 86199533,86206295,86207327,86213794 Gene ID= ENSG00000132313.14 TPM= 36.22 Transcript Type= protein_coding chr2 86441329 86492716 86441329 86492716 + transcript2529.chr2.nic@KDM3A transcript2529.chr2.nic protein_coding 86441329,86442018,86449807,86451103,86455085,86456442,86456805,86456983,86460779,86464053,86466372,86470204,86474776,86477877,86478170,86478608,86480167,86481930,86482458,86483987,86484942,86485729,86489318,86489520,86490881,86491141,86492039 86441444,86442233,86449962,86451213,86455187,86456566,86456877,86457071,86460831,86464216,86466883,86470408,86474990,86478029,86478265,86478735,86480362,86482102,86482694,86484158,86485029,86485859,86489437,86489659,86491057,86491275,86492716 Gene ID= ENSG00000115548.16 TPM= 3.17 Transcript Type= NA chr2 86440801 86492716 86440801 86492716 + ENST00000409556.5@KDM3A ENST00000409556.5 protein_coding 86440801,86441272,86442018,86449807,86451103,86455085,86456442,86456805,86456983,86464053,86466372,86470204,86474776,86477877,86478170,86478608,86480167,86481930,86482458,86483987,86484942,86485729,86489318,86489520,86490881,86491141,86492039 86440962,86441444,86442233,86449962,86451213,86455187,86456566,86456877,86457071,86464216,86466883,86470408,86474990,86478029,86478265,86478735,86480362,86482102,86482694,86484158,86485029,86485859,86489437,86489659,86491057,86491275,86492716 Gene ID= ENSG00000115548.16 TPM= 24.9 Transcript Type= protein_coding chr2 86499593 86563491 86499593 86563491 - transcript2534.chr2.nnic@CHMP3 transcript2534.chr2.nnic protein_coding 86563304,86542252,86541117,86529218,86510358,86507479,86499593 86563491,86542312,86541364,86529397,86510479,86507593,86505949 Gene ID= ENSG00000115561.15 TPM= 6.34 Transcript Type= NA chr2 86503431 86563477 86503431 86563477 - ENST00000263856.8@CHMP3 ENST00000263856.8 protein_coding 86563304,86542252,86529218,86510358,86507479,86503431 86563477,86542312,86529397,86510479,86507593,86505949 Gene ID= ENSG00000115561.15 TPM= 111.83 Transcript Type= protein_coding chr2 86505444 86563479 86505444 86563479 - ENST00000409225.2@CHMP3 ENST00000409225.2 protein_coding 86563304,86529218,86510358,86507479,86505444 86563479,86529397,86510479,86507593,86505949 Gene ID= ENSG00000115561.15 TPM= 3.17 Transcript Type= protein_coding chr2 86603393 86623855 86603393 86623855 - ENST00000237455.4@RNF103 ENST00000237455.4 protein_coding 86622661,86620330,86612159,86603393 86623855,86620469,86612274,86605418 Gene ID= ENSG00000239305.6 TPM= 80.59 Transcript Type= protein_coding chr2 86720173 86778041 86720173 86778041 + ENST00000283632.4@RMND5A ENST00000283632.4 protein_coding 86720173,86740927,86751896,86753458,86765027,86765859,86770023,86771558,86773348 86720809,86741069,86752030,86753558,86765193,86766024,86770125,86771712,86778041 Gene ID= ENSG00000153561.12 TPM= 48.9 Transcript Type= protein_coding chr2 87012315 87076428 87012315 87076428 - transcript2546.chr2.nnic@AC125232.1 transcript2546.chr2.nnic unprocessed_pseudogene 87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87023455,87022161,87017553,87016302,87012315 87076428,87055800,87052992,87049803,87047306,87043984,87037528,87034243,87032203,87031898,87023533,87022353,87017688,87016408,87013119 Gene ID= ENSG00000231259.4 TPM= 1.81 Transcript Type= NA chr2 87030677 87076459 87030677 87076459 - transcript2550.chr2.nnic@AC125232.1 transcript2550.chr2.nnic unprocessed_pseudogene 87075919,87055658,87052814,87049589,87047188,87043713,87037294,87034152,87032069,87031816,87030677 87076459,87055800,87052992,87049803,87047306,87043984,87037528,87034243,87032203,87031898,87030907 Gene ID= ENSG00000231259.4 TPM= 13.58 Transcript Type= NA chr2 87439523 87459044 87439523 87459044 - ENST00000625410.1@LINC01943 ENST00000625410.1 lincRNA 87458857,87439523 87459044,87439893 Gene ID= ENSG00000280721.1 TPM= 1.81 Transcript Type= lincRNA chr2 87455429 87521518 87455429 87521518 + ENST00000331944.10@CYTOR ENST00000331944.10 lincRNA 87455429,87521207 87455645,87521518 Gene ID= ENSG00000222041.10 TPM= 10.87 Transcript Type= lincRNA chr2 87757276 87825848 87757276 87825848 - transcript2564.chr2.nnic@RGPD2 transcript2564.chr2.nnic protein_coding 87825658,87818559,87816866,87816269,87811976,87806696,87800605,87797965,87795667,87795408,87795117,87794035,87793631,87793222,87792162,87791990,87788722,87785075,87782124,87774944,87772169,87757276 87825848,87818623,87816977,87816421,87812206,87806891,87800692,87798174,87795848,87795583,87795240,87794193,87793768,87793368,87792341,87792073,87788839,87785169,87784347,87775083,87772364,87757426 Gene ID= ENSG00000185304.14 TPM= 2.72 Transcript Type= NA chr2 88027204 88055793 88027204 88055793 - transcript2566.chr2.nnic@KRCC1 transcript2566.chr2.nnic protein_coding 88055626,88036943,88034134,88027204 88055793,88037051,88034231,88028585 Gene ID= ENSG00000172086.7 TPM= 2.72 Transcript Type= NA chr2 88027205 88055729 88027205 88055729 - ENST00000347055.3@KRCC1 ENST00000347055.3 protein_coding 88055626,88036943,88034134,88027205 88055729,88037051,88034292,88028585 Gene ID= ENSG00000172086.7 TPM= 11.77 Transcript Type= protein_coding chr2 88170324 88186630 88170324 88186630 + transcript2570.chr2.nic@THNSL2 transcript2570.chr2.nic protein_coding 88170324,88173139,88174639,88175249,88178783,88182699,88182948,88185328,88185898 88170456,88173373,88174833,88175401,88179013,88182847,88183073,88185479,88186630 Gene ID= ENSG00000144115.16 TPM= 27.47 Transcript Type= NA chr2 88170324 88186632 88170324 88186632 + transcript2571.chr2.nic@THNSL2 transcript2571.chr2.nic protein_coding 88170324,88173139,88174639,88175249,88178783,88182699,88182948,88185328,88185898 88170456,88173373,88174833,88175401,88179013,88182847,88183073,88185724,88186632 Gene ID= ENSG00000144115.16 TPM= 3.92 Transcript Type= NA chr2 88170324 88186630 88170324 88186630 + transcript2573.chr2.nic@THNSL2 transcript2573.chr2.nic protein_coding 88170324,88173139,88174639,88175249,88178783,88182699,88182948,88185898 88170456,88173373,88174833,88175401,88179013,88182847,88183073,88186630 Gene ID= ENSG00000144115.16 TPM= 2.11 Transcript Type= NA chr2 88170726 88186630 88170726 88186630 + transcript2578.chr2.nic@THNSL2 transcript2578.chr2.nic protein_coding 88170726,88174639,88175249,88178783,88182699,88182948,88185898 88173373,88174833,88175401,88179013,88182847,88183073,88186630 Gene ID= ENSG00000144115.16 TPM= 1.81 Transcript Type= NA chr2 88556743 88627487 88556743 88627487 - transcript2582.chr2.nnic@EIF2AK3 transcript2582.chr2.nnic protein_coding 88626967,88613724,88595469,88593913,88593272,88590818,88590443,88588761,88587982,88585841,88583430,88579518,88576554,88574666,88570874,88562289,88558917,88556743 88627487,88613853,88595663,88594108,88593405,88591052,88590605,88588901,88588104,88586061,88583542,88579640,88576703,88575446,88571041,88562390,88558979,88557936 Gene ID= ENSG00000172071.11 TPM= 2.72 Transcript Type= NA chr2 88556743 88627576 88556743 88627576 - ENST00000303236.7@EIF2AK3 ENST00000303236.7 protein_coding 88626967,88613724,88595469,88593272,88590818,88590443,88588761,88587982,88585841,88583430,88579518,88576554,88574666,88570874,88562289,88558917,88556743 88627576,88613853,88595663,88593405,88591052,88590605,88588901,88588104,88586061,88583542,88579640,88576703,88575446,88571041,88562390,88558979,88557936 Gene ID= ENSG00000172071.11 TPM= 8.15 Transcript Type= protein_coding chr2 88691644 88750935 88691644 88750935 + ENST00000283646.4@RPIA ENST00000283646.4 protein_coding 88691644,88698484,88700009,88729278,88734552,88735669,88736535,88737977,88749981 88691983,88698544,88700064,88729337,88734616,88735737,88736676,88738076,88750935 Gene ID= ENSG00000153574.8 TPM= 29.88 Transcript Type= protein_coding chr2 88857157 89143141 88857157 89143141 - transcript2628.chr2.nnic@AC244205.1 transcript2628.chr2.nnic processed_transcript 89143060,89027185,88861525,88857157 89143141,89027466,88861556,88857683 Gene ID= ENSG00000240040.6 TPM= 11.99 Transcript Type= NA chr2 88857160 89143141 88857160 89143141 - transcript2664.chr2.nnic@AC244205.1 transcript2664.chr2.nnic processed_transcript 89143060,89027185,88860886,88857160 89143141,89027466,88860936,88857683 Gene ID= ENSG00000240040.6 TPM= 5.65 Transcript Type= NA chr2 88857157 89143156 88857157 89143156 - transcript2598.chr2.nnic@IGKV3-20 transcript2598.chr2.nnic IG_V_gene 89143060,89142649,89027185,88861525,88857157 89143156,89142872,89027245,88861556,88857683 Gene ID= ENSG00000239951.1 TPM= 117.94 Transcript Type= NA chr2 88857157 89143156 88857157 89143156 - transcript2631.chr2.nnic@IGKV3-20 transcript2631.chr2.nnic IG_V_gene 89143060,89142568,88861525,88857157 89143156,89142872,88861556,88857683 Gene ID= ENSG00000239951.1 TPM= 11.08 Transcript Type= NA chr2 88857159 89143156 88857159 89143156 - transcript2644.chr2.nnic@IGKV3-20 transcript2644.chr2.nnic IG_V_gene 89143060,89142574,88861886,88857159 89143156,89142872,88861925,88857683 Gene ID= ENSG00000239951.1 TPM= 30.1 Transcript Type= NA chr2 88857159 88947803 88857159 88947803 - transcript2641.chr2.nnic@IGKV1-5 transcript2641.chr2.nnic IG_V_gene 88947722,88947302,88861886,88857159 88947803,88947596,88861923,88857683 Gene ID= ENSG00000243466.1 TPM= 11.08 Transcript Type= NA chr2 88857161 88947803 88857161 88947803 - transcript2667.chr2.nnic@IGKV1-5 transcript2667.chr2.nnic IG_V_gene 88947722,88947302,88861221,88857161 88947803,88947596,88861258,88857683 Gene ID= ENSG00000243466.1 TPM= 7.46 Transcript Type= NA chr2 88857159 89085731 88857159 89085731 - transcript2639.chr2.nnic@IGKV3-15 transcript2639.chr2.nnic IG_V_gene 89085642,89085176,88861886,88857159 89085731,89085472,88861921,88857683 Gene ID= ENSG00000244437.1 TPM= 6.56 Transcript Type= NA chr2 88857167 89085731 88857167 89085731 - transcript2672.chr2.nnic@IGKV3-15 transcript2672.chr2.nnic IG_V_gene 89085642,89085171,88860568,88857167 89085731,89085472,88860601,88857683 Gene ID= ENSG00000244437.1 TPM= 4.75 Transcript Type= NA chr2 89562338 89585647 89562338 89585647 - transcript2692.chr2.nnic@AC006453.2 transcript2692.chr2.nnic lincRNA 89585550,89581006,89562338 89585647,89581140,89562829 Gene ID= ENSG00000283196.1 TPM= 1.81 Transcript Type= NA chr2 89562335 89585608 89562335 89585608 - ENST00000636560.1@AC006453.2 ENST00000636560.1 lincRNA 89585550,89581006,89580558,89562335 89585608,89581140,89580635,89562684 Gene ID= ENSG00000283196.1 TPM= 1.81 Transcript Type= lincRNA chr2 91617160 91659972 91617160 91659972 - ENST00000609777.5@AC116050.1 ENST00000609777.5 transcribed_unprocessed_pseudogene 91659909,91655368,91617160 91659972,91655502,91618154 Gene ID= ENSG00000143429.10 TPM= 2.72 Transcript Type= processed_transcript chr2 95087207 95122000 95087207 95122000 - ENST00000272418.6@MRPS5 ENST00000272418.6 protein_coding 95121734,95117865,95115066,95109916,95108175,95106423,95104640,95101677,95100837,95100474,95090386,95087207 95122000,95117945,95115203,95110041,95108408,95106457,95104730,95101723,95100894,95100536,95090522,95087581 Gene ID= ENSG00000144029.11 TPM= 84.67 Transcript Type= protein_coding chr2 95402694 95413131 95402694 95413131 + transcript2713.chr2.nic@FAHD2A transcript2713.chr2.nic protein_coding 95402694,95405553,95406941,95410527,95410864,95412434,95412677,95412895 95402992,95405803,95407157,95410586,95411026,95412542,95412764,95413131 Gene ID= ENSG00000115042.9 TPM= 9.81 Transcript Type= NA chr2 95402726 95416616 95402726 95416616 + ENST00000233379.8@FAHD2A ENST00000233379.8 protein_coding 95402726,95405553,95406941,95410527,95410864,95412434,95412677,95412895 95402872,95405803,95407157,95410586,95411026,95412542,95412764,95416616 Gene ID= ENSG00000115042.9 TPM= 16.6 Transcript Type= protein_coding chr2 95402676 95413131 95402676 95413131 + transcript2716.chr2.nic@FAHD2A transcript2716.chr2.nic protein_coding 95402676,95405553,95406941,95410527,95412434,95412677,95412895 95402872,95405803,95407157,95411026,95412542,95412764,95413131 Gene ID= ENSG00000115042.9 TPM= 2.56 Transcript Type= NA chr2 95402723 95413096 95402723 95413096 + ENST00000447036.5@FAHD2A ENST00000447036.5 protein_coding 95402723,95405277,95405553,95406941,95410527,95410864,95412434,95412677,95412895 95402872,95405402,95405803,95407157,95410586,95411026,95412542,95412764,95413096 Gene ID= ENSG00000115042.9 TPM= 8.15 Transcript Type= protein_coding chr2 96021945 96034937 96021945 96034937 - transcript2725.chr2.nnic@GPAT2 transcript2725.chr2.nnic protein_coding 96034817,96032297,96032033,96030406,96026183,96025930,96024427,96024189,96023309,96022958,96022668,96021945 96034937,96032419,96032146,96031334,96028090,96026012,96025603,96024337,96024000,96023023,96022723,96022275 Gene ID= ENSG00000186281.12 TPM= 1.81 Transcript Type= NA chr2 96143166 96145440 96143166 96145440 - ENST00000288943.4@DUSP2 ENST00000288943.4 protein_coding 96144967,96144761,96144154,96143166 96145440,96144882,96144373,96144037 Gene ID= ENSG00000158050.4 TPM= 3.62 Transcript Type= protein_coding chr2 96184866 96208837 96184866 96208837 - transcript2738.chr2.nnic@STARD7 transcript2738.chr2.nnic protein_coding 96208145,96196941,96195341,96194958,96193242,96193078,96192369,96187217,96184866 96208837,96197038,96195549,96195007,96193352,96193160,96192468,96187301,96186914 Gene ID= ENSG00000084090.13 TPM= 24.75 Transcript Type= NA chr2 96184866 96208825 96184866 96208825 - transcript2743.chr2.nic@STARD7 transcript2743.chr2.nic protein_coding 96208539,96195341,96194958,96193242,96193078,96192369,96187217,96184866 96208825,96195549,96195007,96193352,96193160,96192468,96187301,96186914 Gene ID= ENSG00000084090.13 TPM= 20.22 Transcript Type= NA chr2 96184859 96208818 96184859 96208818 - ENST00000337288.9@STARD7 ENST00000337288.9 protein_coding 96208145,96195341,96194958,96193242,96193078,96192369,96187217,96184859 96208818,96195549,96195007,96193352,96193160,96192468,96187301,96186914 Gene ID= ENSG00000084090.13 TPM= 368.86 Transcript Type= protein_coding chr2 96208388 96243376 96208388 96243376 + transcript2751.chr2.nnic@STARD7-AS1 transcript2751.chr2.nnic processed_transcript 96208388,96237905,96239713,96241877 96208979,96238099,96240688,96243376 Gene ID= ENSG00000204685.6 TPM= 4.53 Transcript Type= NA chr2 96248516 96265994 96248516 96265994 - ENST00000258439.7@TMEM127 ENST00000258439.7 protein_coding 96265869,96265138,96254833,96248516 96265994,96265512,96254997,96254115 Gene ID= ENSG00000135956.8 TPM= 79.69 Transcript Type= protein_coding chr2 96251660 96265994 96251660 96265994 - ENST00000432959.1@TMEM127 ENST00000432959.1 protein_coding 96265869,96265138,96254833,96251660 96265994,96265489,96254997,96254115 Gene ID= ENSG00000135956.8 TPM= 28.07 Transcript Type= protein_coding chr2 96266225 96274154 96266225 96274154 + transcript2757.chr2.nic@CIAO1 transcript2757.chr2.nic protein_coding 96266225,96267290,96267625,96267836,96268457,96269268,96271111 96266489,96267469,96267736,96267924,96268658,96269355,96274154 Gene ID= ENSG00000144021.2 TPM= 8.3 Transcript Type= NA chr2 96266224 96274154 96266224 96274154 + transcript2759.chr2.nic@CIAO1 transcript2759.chr2.nic protein_coding 96266224,96267321,96267625,96267836,96268457,96271111 96266489,96267469,96267736,96267924,96269355,96274154 Gene ID= ENSG00000144021.2 TPM= 10.11 Transcript Type= NA chr2 96266132 96271645 96266132 96271645 + ENST00000488633.1@CIAO1 ENST00000488633.1 protein_coding 96266132,96267321,96267625,96267836,96268457,96269268,96271111 96266489,96267469,96267736,96267924,96268658,96269355,96271645 Gene ID= ENSG00000144021.2 TPM= 57.95 Transcript Type= protein_coding chr2 96274336 96305515 96274336 96305515 - ENST00000323853.9@SNRNP200 ENST00000323853.9 protein_coding 96305393,96304705,96303159,96301524,96300998,96299329,96298815,96298603,96298284,96297637,96297363,96296933,96296536,96295488,96293316,96292972,96291751,96291392,96290684,96290326,96289799,96289227,96289037,96288663,96287863,96287439,96287006,96286688,96286311,96285180,96284358,96283813,96283535,96283201,96281814,96279451,96278809,96278547,96278237,96277807,96277539,96277081,96276904,96275257,96274336 96305515,96304868,96303330,96301716,96301053,96299427,96298967,96298702,96298420,96297720,96297536,96297070,96296691,96295658,96293509,96293095,96291900,96291502,96290815,96290514,96289996,96289379,96289117,96288746,96287969,96287557,96287160,96286877,96286484,96285340,96284585,96284004,96283713,96283352,96281922,96279559,96278998,96278711,96278358,96277950,96277715,96277241,96276985,96275349,96275155 Gene ID= ENSG00000144028.14 TPM= 77.88 Transcript Type= protein_coding chr2 96536709 96552637 96536709 96552637 + transcript2777.chr2.nnic@ARID5A transcript2777.chr2.nnic protein_coding 96536709,96547402,96549321,96549753,96550029,96550574,96551099 96536830,96547517,96549459,96549805,96550285,96550733,96552637 Gene ID= ENSG00000196843.15 TPM= 2.72 Transcript Type= NA chr2 96536709 96552637 96536709 96552637 + transcript2779.chr2.nic@ARID5A transcript2779.chr2.nic protein_coding 96536709,96547402,96549321,96549753,96550574,96551099 96536830,96547517,96549459,96550285,96550733,96552637 Gene ID= ENSG00000196843.15 TPM= 4.53 Transcript Type= NA chr2 96536749 96552638 96536749 96552638 + ENST00000357485.7@ARID5A ENST00000357485.7 protein_coding 96536749,96547402,96549321,96549753,96550188,96550574,96551099 96536830,96547517,96549459,96549805,96550285,96550733,96552638 Gene ID= ENSG00000196843.15 TPM= 4.53 Transcript Type= protein_coding chr2 96536752 96552630 96536752 96552630 + ENST00000412735.5@ARID5A ENST00000412735.5 protein_coding 96536752,96547402,96549753,96550188,96550574,96551099 96536830,96547517,96549805,96550285,96550733,96552630 Gene ID= ENSG00000196843.15 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr2 96593153 96638366 96593153 96638366 - transcript2793.chr2.nic@KANSL3 transcript2793.chr2.nic protein_coding 96638283,96636921,96631312,96619672,96619359,96613488,96612818,96612462,96612282,96611064,96610726,96609499,96608864,96608508,96605320,96604779,96604250,96602753,96601643,96593153 96638366,96637185,96631482,96619762,96619544,96613619,96612934,96612563,96612353,96611138,96610883,96609562,96609064,96608664,96605511,96604863,96604380,96602862,96601776,96595631 Gene ID= ENSG00000114982.17 TPM= 6.34 Transcript Type= NA chr2 96593172 96638309 96593172 96638309 - ENST00000431828.5@KANSL3 ENST00000431828.5 protein_coding 96638283,96636921,96631312,96619672,96619359,96613488,96612818,96612462,96612282,96611064,96610726,96609499,96608864,96608508,96605320,96604779,96604250,96602753,96602116,96601643,96593172 96638309,96637185,96631482,96619762,96619544,96613619,96612934,96612563,96612353,96611138,96610883,96609562,96609064,96608664,96605511,96604863,96604380,96602862,96602338,96601776,96595631 Gene ID= ENSG00000114982.17 TPM= 30.79 Transcript Type= protein_coding chr2 96705927 96740072 96705927 96740072 - transcript2799.chr2.nic@LMAN2L transcript2799.chr2.nic protein_coding 96739854,96737949,96737137,96734409,96711864,96711656,96707714,96705927 96740072,96738067,96737217,96734526,96712025,96711770,96707833,96707398 Gene ID= ENSG00000114988.11 TPM= 2.72 Transcript Type= NA chr2 96705929 96740063 96705929 96740063 - ENST00000264963.8@LMAN2L ENST00000264963.8 protein_coding 96739854,96737949,96734409,96733519,96711864,96711656,96707714,96705929 96740063,96738067,96734526,96733601,96712025,96711770,96707833,96707398 Gene ID= ENSG00000114988.11 TPM= 60.67 Transcript Type= protein_coding chr2 96760902 96811891 96760902 96811891 + ENST00000377075.2@CNNM4 ENST00000377075.2 protein_coding 96760902,96797012,96797513,96799057,96799552,96808561,96809320 96762401,96797155,96797647,96799226,96799648,96808742,96811891 Gene ID= ENSG00000158158.11 TPM= 7.24 Transcript Type= protein_coding chr2 96816234 96835381 96816234 96835381 + transcript2815.chr2.nnic@CNNM3 transcript2815.chr2.nnic protein_coding 96816234,96825058,96827731,96828099,96828567,96828996,96832552 96817502,96825201,96827900,96828195,96828700,96829134,96835381 Gene ID= ENSG00000168763.15 TPM= 9.96 Transcript Type= NA chr2 96816250 96833911 96816250 96833911 + ENST00000305510.3@CNNM3 ENST00000305510.3 protein_coding 96816250,96825058,96826833,96827731,96828099,96828567,96828996,96832552 96817502,96825201,96826982,96827900,96828195,96828700,96829134,96833911 Gene ID= ENSG00000168763.15 TPM= 54.33 Transcript Type= protein_coding chr2 96837913 96858059 96837913 96858059 - transcript2808.chr2.nic@ANKRD39 transcript2808.chr2.nic protein_coding 96857888,96854338,96853401,96848269,96842365,96842060,96840416,96840232,96839997,96839727,96837913 96858059,96854441,96853604,96848444,96842511,96842185,96840912,96840330,96840095,96839825,96839644 Gene ID= ENSG00000213337.8 TPM= 2.72 Transcript Type= NA chr2 96847985 96858095 96847985 96858095 - ENST00000393537.4@ANKRD39 ENST00000393537.4 protein_coding 96857888,96854338,96853401,96847985 96858095,96854441,96853604,96848444 Gene ID= ENSG00000213337.8 TPM= 31.69 Transcript Type= protein_coding chr2 96859720 96869386 96859720 96869386 - transcript2823.chr2.nnic@SEMA4C transcript2823.chr2.nnic protein_coding 96869187,96868416,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859720 96869386,96868484,96867926,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455 Gene ID= ENSG00000168758.10 TPM= 4.3 Transcript Type= NA chr2 96859720 96868545 96859720 96868545 - transcript2828.chr2.nic@SEMA4C transcript2828.chr2.nic protein_coding 96868416,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859720 96868545,96867926,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455 Gene ID= ENSG00000168758.10 TPM= 5.21 Transcript Type= NA chr2 96859720 96869513 96859720 96869513 - transcript2829.chr2.nnic@SEMA4C transcript2829.chr2.nnic protein_coding 96869187,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859720 96869513,96867926,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455 Gene ID= ENSG00000168758.10 TPM= 10.64 Transcript Type= NA chr2 96859716 96869971 96859716 96869971 - ENST00000305476.9@SEMA4C ENST00000305476.9 protein_coding 96869876,96867778,96866283,96865867,96865666,96865441,96865204,96864964,96864705,96864238,96863926,96863682,96861737,96861579,96859716 96869971,96867923,96866431,96865929,96865764,96865537,96865320,96865115,96864880,96864382,96864148,96863794,96861894,96861649,96861455 Gene ID= ENSG00000168758.10 TPM= 8.83 Transcript Type= protein_coding chr2 97083583 97094882 97083583 97094882 - ENST00000272610.3@FAHD2B ENST00000272610.3 protein_coding 97094701,97091462,97090109,97086139,97085699,97084169,97083948,97083583 97094882,97091712,97090325,97086198,97085861,97084277,97084035,97083817 Gene ID= ENSG00000144199.11 TPM= 7.24 Transcript Type= protein_coding chr2 97083583 97094839 97083583 97094839 - ENST00000414820.5@FAHD2B ENST00000414820.5 protein_coding 97094701,97091863,97091462,97090109,97086139,97085699,97084169,97083948,97083583 97094839,97091988,97091712,97090325,97086198,97085861,97084277,97084035,97083817 Gene ID= ENSG00000144199.11 TPM= 8.15 Transcript Type= protein_coding chr2 97646040 97648383 97646040 97648383 + ENST00000258424.2@COX5B ENST00000258424.2 protein_coding 97646040,97647067,97647344,97647996 97646189,97647140,97647443,97648383 Gene ID= ENSG00000135940.6 TPM= 344.56 Transcript Type= protein_coding chr2 97646097 97648191 97646097 97648191 + ENST00000464949.5@COX5B ENST00000464949.5 protein_coding 97646097,97646517,97647067,97647344,97647996 97646189,97646666,97647140,97647443,97648191 Gene ID= ENSG00000135940.6 TPM= 1.36 Transcript Type= processed_transcript chr2 97655939 97664012 97655939 97664012 - transcript2862.chr2.nic@ACTR1B transcript2862.chr2.nic protein_coding 97663843,97661882,97660571,97659352,97658427,97658224,97657943,97657448,97657152,97655939 97664012,97661946,97660646,97659477,97659003,97658316,97658117,97657509,97657192,97656960 Gene ID= ENSG00000115073.7 TPM= 11.77 Transcript Type= NA chr2 97655939 97664071 97655939 97664071 - transcript2866.chr2.nic@ACTR1B transcript2866.chr2.nic protein_coding 97663843,97661882,97660571,97659352,97658427,97657943,97657448,97657152,97655939 97664071,97661946,97660646,97659477,97659003,97658316,97657509,97657192,97656960 Gene ID= ENSG00000115073.7 TPM= 5.43 Transcript Type= NA chr2 97655963 97664107 97655963 97664107 - ENST00000289228.6@ACTR1B ENST00000289228.6 protein_coding 97663843,97661882,97660571,97659352,97658879,97658427,97658224,97657943,97657448,97657152,97655963 97664107,97661946,97660646,97659477,97659003,97658643,97658316,97658117,97657509,97657192,97656960 Gene ID= ENSG00000115073.7 TPM= 109.57 Transcript Type= protein_coding chr2 97713560 97739860 97713560 97739860 + ENST00000264972.9@ZAP70 ENST00000264972.9 protein_coding 97713560,97713916,97724016,97725092,97732883,97733125,97733297,97733544,97734520,97735250,97737473,97737757,97737995,97739375 97713674,97713994,97724438,97725252,97733021,97733212,97733343,97733595,97734712,97735456,97737665,97737897,97738107,97739860 Gene ID= ENSG00000115085.13 TPM= 1.81 Transcript Type= protein_coding chr2 97793302 97995948 97793302 97995948 - transcript2871.chr2.nic@TMEM131 transcript2871.chr2.nic protein_coding 97995476,97927426,97908658,97888052,97859304,97844145,97841815,97837077,97834775,97834621,97833365,97818613,97815199,97814235,97813971,97812639,97812421,97811128,97809688,97805551,97805376,97805088,97802652,97802428,97801895,97797365,97796844,97796218,97794930,97793302 97995948,97927487,97908698,97888120,97859427,97844261,97841937,97837157,97834925,97834677,97833426,97818721,97815307,97814388,97814141,97812749,97812555,97811232,97809774,97805703,97805451,97805205,97802790,97802537,97801961,97797516,97796986,97796404,97795115,97793553 Gene ID= ENSG00000075568.16 TPM= 2.72 Transcript Type= NA chr2 97756340 97995891 97756340 97995891 - ENST00000186436.9@TMEM131 ENST00000186436.9 protein_coding 97995476,97927426,97908658,97888052,97859304,97844145,97841815,97837077,97834775,97834621,97833365,97818613,97815199,97814235,97813971,97812639,97812421,97811128,97809688,97805551,97805376,97805088,97802652,97802428,97801895,97797365,97796844,97796218,97794930,97793395,97792386,97775843,97772297,97766478,97766114,97762035,97760793,97760593,97759652,97758893,97756340 97995891,97927487,97908698,97888120,97859427,97844261,97841937,97837157,97834925,97834677,97833426,97818721,97815307,97814388,97814141,97812749,97812555,97811232,97809774,97805703,97805451,97805205,97802790,97802537,97801961,97797516,97796986,97796404,97795115,97793553,97792984,97776018,97772424,97766602,97766263,97762200,97760914,97760689,97759749,97759053,97757383 Gene ID= ENSG00000075568.16 TPM= 6.34 Transcript Type= protein_coding chr2 98444839 98590153 98444839 98590153 + transcript2879.chr2.nnic@INPP4A transcript2879.chr2.nnic protein_coding 98444839,98518964,98519946,98520687,98533377,98535729,98536129,98537863,98538891,98539528,98543877,98545969,98546586,98548955,98552786,98554271,98555553,98563465,98564640,98565640,98566029,98568571,98572815,98576989,98587476 98445085,98519025,98520154,98520731,98533495,98535845,98536208,98537974,98538981,98539675,98544007,98546073,98546694,98548969,98552969,98554489,98555691,98563637,98564763,98565766,98566169,98568668,98572927,98577143,98590153 Gene ID= ENSG00000040933.15 TPM= 2.72 Transcript Type= NA chr2 98444839 98590153 98444839 98590153 + transcript2880.chr2.nnic@INPP4A transcript2880.chr2.nnic protein_coding 98444839,98518964,98519946,98520687,98533377,98535729,98536129,98537863,98538891,98539528,98543877,98545969,98546586,98548955,98552786,98554271,98555553,98563465,98564640,98565640,98566029,98568571,98572815,98576989,98587476 98445085,98519025,98520154,98520731,98533495,98535845,98536208,98537974,98538981,98539675,98544007,98546073,98546694,98548969,98552969,98554489,98555808,98563637,98564763,98565766,98566169,98568668,98572927,98577143,98590153 Gene ID= ENSG00000040933.15 TPM= 2.72 Transcript Type= NA chr2 98444839 98577974 98444839 98577974 + transcript2882.chr2.nnic@INPP4A transcript2882.chr2.nnic protein_coding 98444839,98518964,98519946,98520687,98533377,98535729,98536129,98537863,98538891,98539528,98543877,98545969,98546586,98552786,98554271,98555553,98559463,98563465,98564640,98565640,98566029,98568571,98572815,98576989,98577732 98445085,98519025,98520154,98520731,98533495,98535845,98536208,98537974,98538981,98539675,98544007,98546073,98546694,98552969,98554489,98555808,98559495,98563637,98564763,98565766,98566169,98568668,98572927,98577143,98577974 Gene ID= ENSG00000040933.15 TPM= 2.72 Transcript Type= NA chr2 98599403 98608512 98599403 98608512 - transcript2885.chr2.nnic@COA5 transcript2885.chr2.nnic protein_coding 98608197,98604108,98599403 98608512,98604191,98600793 Gene ID= ENSG00000183513.8 TPM= 2.72 Transcript Type= NA chr2 98599310 98608492 98599310 98608492 - ENST00000328709.7@COA5 ENST00000328709.7 protein_coding 98608307,98604108,98599310 98608492,98604191,98600793 Gene ID= ENSG00000183513.8 TPM= 84.22 Transcript Type= protein_coding chr2 98608545 98618512 98608545 98618512 + transcript2892.chr2.nnic@UNC50 transcript2892.chr2.nnic protein_coding 98608545,98609643,98610775,98616207,98616432,98618168 98608726,98610039,98610895,98616346,98616533,98618512 Gene ID= ENSG00000115446.11 TPM= 10.41 Transcript Type= NA chr2 98608568 98613287 98608568 98613287 + transcript2896.chr2.nnic@UNC50 transcript2896.chr2.nnic protein_coding 98608568,98609756,98610775,98612431 98608726,98610039,98610895,98613287 Gene ID= ENSG00000115446.11 TPM= 3.62 Transcript Type= NA chr2 98608579 98618515 98608579 98618515 + ENST00000357765.6@UNC50 ENST00000357765.6 protein_coding 98608579,98609756,98610775,98616207,98616432,98618168 98608726,98610039,98610895,98616346,98616533,98618515 Gene ID= ENSG00000115446.11 TPM= 42.11 Transcript Type= protein_coding chr2 98608579 98618515 98608579 98618515 + ENST00000409975.5@UNC50 ENST00000409975.5 protein_coding 98608579,98610775,98616207,98616432,98618168 98610039,98610895,98616346,98616533,98618515 Gene ID= ENSG00000115446.11 TPM= 3.62 Transcript Type= protein_coding chr2 98793845 98822891 98793845 98822891 - transcript2898.chr2.nnic@KIAA1211L transcript2898.chr2.nnic protein_coding 98822494,98821857,98797350,98796120,98793845 98822891,98822326,98797537,98796264,98794671 Gene ID= ENSG00000196872.11 TPM= 1.81 Transcript Type= NA chr2 98793846 98936259 98793846 98936259 - ENST00000397899.6@KIAA1211L ENST00000397899.6 protein_coding 98935938,98846731,98838119,98832862,98832348,98826975,98821857,98797350,98796120,98793846 98936259,98846810,98838287,98832997,98832512,98827169,98823537,98797537,98796264,98794671 Gene ID= ENSG00000196872.11 TPM= 12.68 Transcript Type= protein_coding chr2 99154955 99163148 99154955 99163148 + ENST00000393471.2@LIPT1 ENST00000393471.2 protein_coding 99154955,99161957 99155051,99163148 Gene ID= ENSG00000144182.16 TPM= 4.53 Transcript Type= protein_coding chr2 99161429 99181351 99161429 99181351 - transcript2914.chr2.nic@MITD1 transcript2914.chr2.nic protein_coding 99180831,99173915,99171510,99171343,99170537,99169550,99161429 99181351,99174016,99171646,99171429,99170652,99169610,99161668 Gene ID= ENSG00000158411.11 TPM= 1.81 Transcript Type= NA chr2 99169263 99181058 99169263 99181058 - ENST00000289359.6@MITD1 ENST00000289359.6 protein_coding 99180831,99173915,99171510,99171343,99170537,99169550,99169263 99181058,99174016,99171646,99171429,99170652,99169610,99169470 Gene ID= ENSG00000158411.11 TPM= 10.87 Transcript Type= protein_coding chr2 99181079 99197626 99181079 99197626 + ENST00000338148.7@MRPL30 ENST00000338148.7 protein_coding 99181079,99186177,99188177,99194751,99195116,99195573 99181249,99186254,99188257,99194897,99195189,99197626 Gene ID= ENSG00000185414.19 TPM= 27.17 Transcript Type= protein_coding chr2 99337353 99401326 99337353 99401326 + ENST00000289371.10@EIF5B ENST00000289371.10 protein_coding 99337353,99360236,99360465,99361148,99363645,99364271,99368493,99369392,99371656,99376347,99379019,99379318,99382159,99382780,99389718,99390219,99390544,99392967,99394267,99394509,99394719,99396760,99398748,99399307 99337589,99360361,99360549,99361820,99363862,99364421,99368591,99369481,99371730,99376636,99379126,99379428,99382226,99382921,99389849,99390401,99390705,99393098,99394398,99394585,99394883,99396898,99398909,99401326 Gene ID= ENSG00000158417.10 TPM= 36.22 Transcript Type= protein_coding chr2 99400942 99490021 99400942 99490021 - transcript2937.chr2.nnic@REV1 transcript2937.chr2.nnic protein_coding 99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99431741,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400942 99490021,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99431940,99429945,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352 Gene ID= ENSG00000135945.9 TPM= 6.34 Transcript Type= NA chr2 99400476 99490050 99400476 99490050 - transcript2938.chr2.nic@REV1 transcript2938.chr2.nic protein_coding 99489817,99464922,99462496,99451345,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400476 99490050,99464985,99462622,99451501,99449504,99442469,99439310,99435941,99434448,99429948,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352 Gene ID= ENSG00000135945.9 TPM= 1.81 Transcript Type= NA chr2 99436099 99490056 99436099 99490056 - transcript2946.chr2.nic@REV1 transcript2946.chr2.nic protein_coding 99489817,99464922,99462496,99449336,99442317,99436099 99490056,99464985,99462622,99449504,99442469,99439310 Gene ID= ENSG00000135945.9 TPM= 4.53 Transcript Type= NA chr2 99400475 99490035 99400475 99490035 - ENST00000258428.7@REV1 ENST00000258428.7 protein_coding 99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400475 99490035,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99429948,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352 Gene ID= ENSG00000135945.9 TPM= 22.64 Transcript Type= protein_coding chr2 99400475 99489973 99400475 99489973 - ENST00000393445.7@REV1 ENST00000393445.7 protein_coding 99489817,99464922,99462496,99449336,99442317,99438601,99435834,99434332,99429840,99424152,99421499,99418828,99412731,99410695,99408029,99406325,99405910,99404444,99403695,99402889,99402644,99402244,99400475 99489973,99464985,99462622,99449504,99442469,99439310,99435941,99434448,99429945,99424280,99421653,99418947,99412951,99410867,99408131,99406490,99406106,99404677,99403815,99403106,99402800,99402346,99401352 Gene ID= ENSG00000135945.9 TPM= 5.43 Transcript Type= protein_coding chr2 100281024 100322497 100281024 100322497 - transcript2948.chr2.nnic@LONRF2 transcript2948.chr2.nnic protein_coding 100321415,100309107,100302921,100300644,100299717,100299226,100298836,100295432,100294229,100290258,100286914,100282850,100281024 100322497,100309225,100303043,100300787,100299918,100299319,100298950,100295553,100294387,100290420,100287063,100284492,100282800 Gene ID= ENSG00000170500.12 TPM= 9.96 Transcript Type= NA chr2 100391860 100417656 100391860 100417656 - ENST00000264249.7@CHST10 ENST00000264249.7 protein_coding 100417374,100415041,100406576,100402564,100397908,100395509,100391860 100417656,100415111,100406707,100402655,100398142,100395614,100393782 Gene ID= ENSG00000115526.10 TPM= 15.39 Transcript Type= protein_coding chr2 100820173 100996820 100820173 100996820 + transcript2961.chr2.nic@NPAS2 transcript2961.chr2.nic protein_coding 100820173,100904733,100925146,100932910,100937753,100948235,100949367,100964058,100964861,100965660,100968281,100970990,100974803,100975458,100977710,100982231,100988079,100990256,100990780,100993347,100995796 100820414,100904786,100925294,100933001,100937842,100948355,100949480,100964176,100964943,100965766,100968428,100971074,100974944,100975567,100977799,100982377,100988276,100990446,100990872,100993527,100996820 Gene ID= ENSG00000170485.16 TPM= 1.81 Transcript Type= NA chr2 100820152 100996829 100820152 100996829 + ENST00000335681.9@NPAS2 ENST00000335681.9 protein_coding 100820152,100904733,100925146,100932910,100937753,100948235,100949367,100964058,100964861,100965660,100968281,100970990,100974803,100975458,100977710,100982231,100988079,100990256,100990780,100993347,100995400 100820414,100904786,100925294,100933001,100937842,100948355,100949480,100964176,100964943,100965766,100968428,100971074,100974944,100975567,100977799,100982377,100988276,100990446,100990872,100993527,100996829 Gene ID= ENSG00000170485.16 TPM= 6.34 Transcript Type= protein_coding chr2 101001715 101007267 101001715 101007267 + ENST00000264258.7@RPL31 ENST00000264258.7 protein_coding 101001715,101002702,101004158,101005959,101006350 101002315,101002808,101004283,101006071,101007267 Gene ID= ENSG00000071082.10 TPM= 444.62 Transcript Type= protein_coding chr2 101002293 101006418 101002293 101006418 + ENST00000409320.7@RPL31 ENST00000409320.7 protein_coding 101002293,101002702,101004158,101005959 101002315,101002808,101004283,101006418 Gene ID= ENSG00000071082.10 TPM= 5.43 Transcript Type= protein_coding chr2 101002283 101019728 101002283 101019728 + ENST00000409028.8@RPL31 ENST00000409028.8 protein_coding 101002283,101002702,101004158,101005959,101018998 101002315,101002808,101004283,101006071,101019728 Gene ID= ENSG00000071082.10 TPM= 6.34 Transcript Type= protein_coding chr2 101007229 101151380 101007229 101151380 - transcript2969.chr2.nic@TBC1D8 transcript2969.chr2.nic protein_coding 101151127,101090254,101059421,101054108,101050401,101040178,101038461,101037532,101036018,101032268,101029491,101028303,101028048,101027383,101022281,101021681,101011451,101010929,101007229 101151380,101090364,101059539,101054336,101050641,101040385,101038655,101037708,101036168,101033758,101029776,101028432,101028146,101027451,101022521,101021746,101011540,101011026,101008273 Gene ID= ENSG00000204634.12 TPM= 1.81 Transcript Type= NA chr2 101011032 101151448 101011032 101151448 - transcript2972.chr2.nic@TBC1D8 transcript2972.chr2.nic protein_coding 101151127,101090254,101059421,101054108,101050401,101040178,101038461,101037532,101036018,101033544,101032268,101029491,101028303,101028048,101027383,101022281,101021681,101011032 101151448,101090364,101059539,101054336,101050641,101040385,101038655,101037708,101036168,101033758,101032385,101029776,101028432,101028146,101027451,101022521,101021746,101011540 Gene ID= ENSG00000204634.12 TPM= 4.53 Transcript Type= NA chr2 101252802 101270316 101252802 101270316 + ENST00000289382.7@CNOT11 ENST00000289382.7 protein_coding 101252802,101257791,101262539,101264845,101266677,101269040,101269216 101253478,101257955,101262691,101265047,101266879,101269136,101270316 Gene ID= ENSG00000158435.7 TPM= 96.29 Transcript Type= protein_coding chr2 101276091 101308696 101276091 101308696 - ENST00000295317.3@RNF149 ENST00000295317.3 protein_coding 101308129,101294931,101294014,101288973,101286081,101281859,101276091 101308696,101295181,101294082,101289055,101286177,101282057,101277281 Gene ID= ENSG00000163162.8 TPM= 85.12 Transcript Type= protein_coding chr2 101697708 101891987 101697708 101891987 + transcript2998.chr2.nic@MAP4K4 transcript2998.chr2.nic protein_coding 101697708,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166 101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891987 Gene ID= ENSG00000071054.16 TPM= 2.11 Transcript Type= NA chr2 101697616 101891495 101697616 101891495 + transcript3000.chr2.nic@MAP4K4 transcript3000.chr2.nic protein_coding 101697616,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859736,101864930,101866428,101867212,101869622,101870295,101871494,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166 101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101871685,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891495 Gene ID= ENSG00000071054.16 TPM= 3.92 Transcript Type= NA chr2 101697708 101891987 101697708 101891987 + transcript3002.chr2.nic@MAP4K4 transcript3002.chr2.nic protein_coding 101697708,101698473,101790720,101823928,101825319,101829504,101831721,101834409,101835900,101839819,101842609,101844101,101855977,101858996,101859643,101864930,101866428,101867212,101869622,101870295,101873647,101874082,101877003,101882551,101885187,101887088,101887778,101888796,101891166 101698137,101698538,101790776,101824053,101825429,101829594,101831851,101834463,101835978,101839994,101842681,101844311,101856138,101859082,101859864,101865036,101866579,101867309,101869797,101870415,101873764,101874252,101877146,101882685,101885287,101887237,101887937,101888935,101891987 Gene ID= ENSG00000071054.16 TPM= 4.83 Transcript Type= NA chr2 101991835 102028418 101991835 102028418 + transcript3012.chr2.nnic@IL1R2 transcript3012.chr2.nnic protein_coding 101991835,102008515,102009562,102015871,102019638,102022187,102024533,102026111,102028226 101991996,102008642,102009826,102016051,102019812,102022249,102024668,102026253,102028418 Gene ID= ENSG00000115590.13 TPM= 4.53 Transcript Type= NA chr2 101991844 102028544 101991844 102028544 + ENST00000332549.7@IL1R2 ENST00000332549.7 protein_coding 101991844,102008515,102009562,102015871,102019638,102022187,102024533,102026111,102028226 101992011,102008642,102009826,102016051,102019812,102022249,102024668,102026253,102028544 Gene ID= ENSG00000115590.13 TPM= 9.96 Transcript Type= protein_coding chr2 102006474 102028542 102006474 102028542 + transcript3015.chr2.nnic@IL1R2 transcript3015.chr2.nnic protein_coding 102006474,102008515,102009562,102015871,102019638,102022187,102024533,102026111,102028226 102006592,102008642,102009826,102016051,102019812,102022249,102024668,102026253,102028542 Gene ID= ENSG00000115590.13 TPM= 4.53 Transcript Type= NA chr2 102070391 102179875 102070391 102179875 + transcript3019.chr2.nic@IL1R1 transcript3019.chr2.nic protein_coding 102070391,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353 102070533,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179875 Gene ID= ENSG00000115594.11 TPM= 7.7 Transcript Type= NA chr2 102142786 102179874 102142786 102179874 + ENST00000410023.5@IL1R1 ENST00000410023.5 protein_coding 102142786,102153941,102157719,102164774,102165115,102166113,102168598,102171801,102172687,102174587,102175478,102176353 102143020,102154017,102157785,102165008,102165304,102166281,102168663,102171918,102172838,102174730,102175645,102179874 Gene ID= ENSG00000115594.11 TPM= 46.64 Transcript Type= protein_coding chr2 102337148 102346100 102337148 102346100 + ENST00000311734.6@IL1RL1 ENST00000311734.6 protein_coding 102337148,102338116,102338837,102340098,102340666,102342223,102343036,102343270 102337337,102338325,102339047,102340272,102340828,102342294,102343177,102346100 Gene ID= ENSG00000115602.16 TPM= 17.21 Transcript Type= protein_coding chr2 102715845 102736888 102715845 102736888 - transcript3036.chr2.nic@MFSD9 transcript3036.chr2.nic protein_coding 102736530,102732322,102731025,102726845,102723700,102715845 102736888,102732409,102731068,102726974,102723878,102719207 Gene ID= ENSG00000135953.10 TPM= 1.81 Transcript Type= NA chr2 102714834 102736887 102714834 102736887 - transcript3037.chr2.nic@MFSD9 transcript3037.chr2.nic protein_coding 102736646,102732322,102731025,102726845,102723700,102714834 102736887,102732409,102731068,102726974,102723878,102719207 Gene ID= ENSG00000135953.10 TPM= 2.72 Transcript Type= NA chr2 102715840 102736854 102715840 102736854 - ENST00000258436.9@MFSD9 ENST00000258436.9 protein_coding 102736646,102732322,102731025,102726845,102723700,102715840 102736854,102732409,102731068,102726974,102723909,102719207 Gene ID= ENSG00000135953.10 TPM= 3.62 Transcript Type= protein_coding chr2 102736908 102817416 102736908 102817416 + ENST00000409528.5@TMEM182 ENST00000409528.5 protein_coding 102736908,102762587,102764329,102797863,102814748 102737013,102762686,102764427,102798000,102817416 Gene ID= ENSG00000170417.15 TPM= 6.34 Transcript Type= protein_coding chr2 105038069 105099959 105038069 105099959 + transcript3041.chr2.nnic@MRPS9 transcript3041.chr2.nnic protein_coding 105038069,105049171,105071313,105071459,105079983,105088984,105089411,105092401,105093530,105097155,105099670 105038227,105049350,105071375,105071489,105080062,105089069,105089995,105092569,105093638,105097324,105099959 Gene ID= ENSG00000135972.8 TPM= 4.53 Transcript Type= NA chr2 105037983 105099960 105037983 105099960 + ENST00000258455.7@MRPS9 ENST00000258455.7 protein_coding 105037983,105049171,105071313,105071459,105079983,105088984,105089920,105092401,105093530,105097155,105099670 105038227,105049350,105071375,105071489,105080062,105089069,105089995,105092569,105093638,105097324,105099960 Gene ID= ENSG00000135972.8 TPM= 83.31 Transcript Type= protein_coding chr2 105264361 105330093 105264361 105330093 - transcript3044.chr2.nnic@TGFBRAP1 transcript3044.chr2.nnic protein_coding 105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105267217,105264361 105330093,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105267559,105267188 Gene ID= ENSG00000135966.12 TPM= 31.24 Transcript Type= NA chr2 105249407 105329735 105249407 105329735 - transcript3050.chr2.nnic@TGFBRAP1 transcript3050.chr2.nnic protein_coding 105329625,105307614,105298511,105296356,105284316,105280382,105277614,105275560,105273544,105272855,105269272,105249407 105329735,105308318,105298705,105296510,105284398,105280723,105277671,105275703,105273690,105273014,105269705,105250412 Gene ID= ENSG00000135966.12 TPM= 1.81 Transcript Type= NA chr2 105337359 105349211 105337359 105349211 + ENST00000258457.6@C2orf49 ENST00000258457.6 protein_coding 105337359,105339583,105342848,105345315 105337686,105339749,105343223,105349211 Gene ID= ENSG00000135974.9 TPM= 17.21 Transcript Type= protein_coding chr2 105360826 105438503 105360826 105438503 - ENST00000393352.7@FHL2 ENST00000393352.7 protein_coding 105438399,105386361,105373559,105367570,105363285,105360826 105438503,105386540,105373733,105367739,105363471,105361434 Gene ID= ENSG00000115641.18 TPM= 74.71 Transcript Type= protein_coding chr2 105360861 105399050 105360861 105399050 - ENST00000408995.5@FHL2 ENST00000408995.5 protein_coding 105398970,105386361,105373559,105367570,105363285,105360861 105399050,105386540,105373733,105367739,105363471,105361434 Gene ID= ENSG00000115641.18 TPM= 29.88 Transcript Type= protein_coding chr2 105360828 105399061 105360828 105399061 - ENST00000322142.12@FHL2 ENST00000322142.12 protein_coding 105398970,105396647,105386361,105373559,105367570,105363285,105360828 105399061,105396697,105386540,105373733,105367739,105363471,105361434 Gene ID= ENSG00000115641.18 TPM= 21.73 Transcript Type= protein_coding chr2 105360857 105396957 105360857 105396957 - ENST00000409807.5@FHL2 ENST00000409807.5 protein_coding 105396647,105386361,105373559,105367570,105363285,105360857 105396957,105386540,105373733,105367739,105363471,105361434 Gene ID= ENSG00000115641.18 TPM= 1.81 Transcript Type= protein_coding chr2 105360826 105399051 105360826 105399051 - ENST00000393353.7@FHL2 ENST00000393353.7 protein_coding 105398842,105386361,105373559,105367570,105363285,105360826 105399051,105386540,105373733,105367739,105363471,105361434 Gene ID= ENSG00000115641.18 TPM= 33.05 Transcript Type= protein_coding chr2 105744897 105894274 105744897 105894274 + ENST00000233154.8@NCK2 ENST00000233154.8 protein_coding 105744897,105816430,105855048,105881328,105892982 105745138,105816613,105855289,105882049,105894274 Gene ID= ENSG00000071051.13 TPM= 100.06 Transcript Type= protein_coding chr2 105745063 105894274 105745063 105894274 + ENST00000451463.6@NCK2 ENST00000451463.6 protein_coding 105745063,105816430,105855048,105892982 105745138,105816613,105855289,105894274 Gene ID= ENSG00000071051.13 TPM= 3.17 Transcript Type= protein_coding chr2 106065656 106078159 106065656 106078159 + ENST00000238044.7@C2orf40 ENST00000238044.7 protein_coding 106065656,106071844,106073886,106077765 106065843,106071891,106074043,106078159 Gene ID= ENSG00000119147.9 TPM= 9.06 Transcript Type= protein_coding chr2 106093304 106194392 106093304 106194392 - transcript3085.chr2.nnic@UXS1 transcript3085.chr2.nnic protein_coding 106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106093304 106194392,106166083,106164784,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106094157 Gene ID= ENSG00000115652.14 TPM= 4.98 Transcript Type= NA chr2 106093303 106194339 106093303 106194339 - ENST00000283148.11@UXS1 ENST00000283148.11 protein_coding 106194148,106166056,106164736,106163667,106158058,106145190,106129674,106125620,106122970,106112646,106104794,106101058,106098716,106096718,106093303 106194339,106166083,106164799,106163710,106158118,106145370,106129778,106125679,106123091,106112765,106104837,106101118,106098773,106096821,106094157 Gene ID= ENSG00000115652.14 TPM= 43.92 Transcript Type= protein_coding chr2 108448561 108509398 108448561 108509398 + ENST00000309863.10@GCC2 ENST00000309863.10 protein_coding 108448561,108449633,108451028,108452399,108468980,108469651,108472827,108475535,108475752,108481697,108482287,108483062,108484149,108485636,108485831,108486511,108487699,108489838,108492573,108495291,108496970,108499553,108507560 108449280,108449689,108451112,108452466,108469084,108472116,108472899,108475635,108475850,108481816,108482451,108483166,108484311,108485736,108485908,108486648,108487820,108490014,108492790,108495485,108497109,108499754,108509398 Gene ID= ENSG00000135968.20 TPM= 8.15 Transcript Type= protein_coding chr2 108504628 108534201 108504628 108534201 - transcript3098.chr2.nnic@GCC2-AS1 transcript3098.chr2.nnic antisense_RNA 108533933,108511930,108504628 108534201,108512012,108505789 Gene ID= ENSG00000214184.3 TPM= 2.72 Transcript Type= NA chr2 108570687 108687244 108570687 108687244 + transcript3101.chr2.nnic@LIMS1 transcript3101.chr2.nnic protein_coding 108570687,108659605,108670781,108672325,108672880,108675878,108676606,108677979,108680695,108683885 108570800,108659764,108670847,108672445,108673029,108676028,108676698,108678027,108680770,108687244 Gene ID= ENSG00000169756.16 TPM= 15.39 Transcript Type= NA chr2 108719481 108785811 108719481 108785811 + ENST00000283195.10@RANBP2 ENST00000283195.10 protein_coding 108719481,108729132,108730774,108731322,108735532,108736104,108740489,108746711,108748920,108751264,108751528,108751871,108752998,108753426,108753825,108754905,108755176,108758413,108762101,108763237,108771701,108772489,108772868,108775732,108777130,108781269,108782128,108782528,108783596 108719678,108729199,108730885,108731474,108735762,108736249,108740681,108746798,108749129,108751445,108751703,108751994,108753159,108753563,108753971,108755084,108755259,108758548,108762195,108768388,108771871,108772581,108773046,108775936,108777231,108781429,108782401,108782862,108785811 Gene ID= ENSG00000153201.15 TPM= 7.24 Transcript Type= protein_coding chr2 109128236 109450343 109128236 109450343 + transcript3111.chr2.nic@SH3RF3 transcript3111.chr2.nic protein_coding 109128236,109347674,109371586,109398590,109419539,109432501,109436893,109449170 109130113,109347949,109371681,109398943,109419642,109432671,109437146,109450343 Gene ID= ENSG00000172985.10 TPM= 2.72 Transcript Type= NA chr2 109542982 109614206 109542982 109614206 - ENST00000397712.6@SEPT10 ENST00000397712.6 protein_coding 109613798,109593051,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542982 109614206,109593119,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324 Gene ID= ENSG00000186522.14 TPM= 67.46 Transcript Type= protein_coding chr2 109542986 109613927 109542986 109613927 - ENST00000397714.6@SEPT10 ENST00000397714.6 protein_coding 109613798,109585721,109585126,109574581,109567815,109565763,109564366,109553087,109546050,109542986 109613927,109585838,109585321,109574767,109567976,109565859,109564534,109553219,109546237,109544324 Gene ID= ENSG00000186522.14 TPM= 4.98 Transcript Type= protein_coding chr2 109819178 109824365 109819178 109824365 + ENST00000493394.1@RGPD5 ENST00000493394.1 protein_coding 109819178,109821905,109824222 109819783,109822114,109824365 Gene ID= ENSG00000015568.12 TPM= 4.53 Transcript Type= retained_intron chr2 109898428 109906456 109898428 109906456 + ENST00000437679.3@LIMS3 ENST00000437679.3 protein_coding 109898428,109903253,109905880 109898910,109903412,109906456 Gene ID= ENSG00000256977.12 TPM= 4.53 Transcript Type= protein_coding chr2 110083870 110116566 110083870 110116566 - ENST00000272462.2@MALL ENST00000272462.2 protein_coding 110115688,110091603,110087572,110083870 110116566,110091770,110087697,110085757 Gene ID= ENSG00000144063.3 TPM= 13.13 Transcript Type= protein_coding chr2 110083874 110118195 110083874 110118195 - transcript3125.chr2.nnic@MALL transcript3125.chr2.nnic protein_coding 110118017,110091603,110087572,110083874 110118195,110091770,110087697,110085757 Gene ID= ENSG00000144063.3 TPM= 4.98 Transcript Type= NA chr2 110178049 110205023 110178049 110205023 - transcript3129.chr2.nic@NPHP1 transcript3129.chr2.nic protein_coding 110204900,110201421,110179624,110178049 110205023,110201494,110179684,110178935 Gene ID= ENSG00000144061.12 TPM= 1.81 Transcript Type= NA chr2 110178041 110204999 110178041 110204999 - ENST00000418527.1@NPHP1 ENST00000418527.1 protein_coding 110204900,110201421,110179624,110178041 110204999,110201494,110179684,110178547 Gene ID= ENSG00000144061.12 TPM= 2.72 Transcript Type= protein_coding chr2 110211530 110212562 110211530 110212562 - ENST00000611969.4@LINC00116 ENST00000611969.4 protein_coding 110212215,110211530 110212562,110211622 Gene ID= ENSG00000175701.10 TPM= 70.63 Transcript Type= protein_coding chr2 110465052 110473075 110465052 110473075 - ENST00000413601.3@LIMS4 ENST00000413601.3 protein_coding 110472597,110468095,110465052 110473075,110468254,110465627 Gene ID= ENSG00000256671.6 TPM= 7.24 Transcript Type= protein_coding chr2 110513821 110577101 110513821 110577101 - ENST00000329516.7@RGPD6 ENST00000329516.7 protein_coding 110576953,110569657,110567964,110567376,110563103,110562612,110557852,110551724,110549393,110547104,110546845,110546554,110545473,110545069,110544660,110543536,110543359,110540055,110536416,110533465,110526265,110523496,110513821 110577101,110569724,110568075,110567528,110563333,110562757,110558047,110551811,110549602,110547285,110547020,110546677,110545631,110545206,110544806,110543715,110543442,110540190,110536510,110535688,110526404,110523697,110515645 Gene ID= ENSG00000183054.11 TPM= 4.53 Transcript Type= protein_coding chr2 111224395 111495099 111224395 111495099 - transcript3149.chr2.nnic@MIR4435-2HG transcript3149.chr2.nnic lincRNA 111494885,111365561,111344061,111248148,111233628,111224471,111224395 111495099,111367575,111344237,111248243,111233739,111225214,111224407 Gene ID= ENSG00000172965.14 TPM= 1.81 Transcript Type= NA chr2 111207781 111495099 111207781 111495099 - transcript3156.chr2.nnic@MIR4435-2HG transcript3156.chr2.nnic lincRNA 111494885,111365561,111344061,111207781 111495099,111367575,111344237,111208661 Gene ID= ENSG00000172965.14 TPM= 1.81 Transcript Type= NA chr2 111429309 111495086 111429309 111495086 - ENST00000409569.2@MIR4435-2HG ENST00000409569.2 lincRNA 111494885,111429309 111495086,111429620 Gene ID= ENSG00000172965.14 TPM= 9.06 Transcript Type= lincRNA chr2 111767637 111884690 111767637 111884690 - ENST00000341068.7@ANAPC1 ENST00000341068.7 protein_coding 111883942,111880613,111878810,111873613,111873308,111872630,111868023,111864806,111863675,111862389,111858306,111856796,111856614,111850776,111847725,111847138,111843412,111838438,111834604,111833220,111831286,111825777,111825131,111824966,111822422,111821239,111818840,111815370,111808947,111805802,111803705,111803448,111802428,111800797,111794818,111794233,111794078,111792362,111788234,111785360,111784323,111783897,111782369,111780299,111778675,111776859,111772341,111767637 111884690,111880849,111878971,111873664,111873408,111872712,111868096,111864951,111863895,111862598,111858401,111856886,111856679,111850910,111847865,111847198,111843599,111838512,111834872,111833311,111831434,111825855,111825167,111825036,111822600,111821453,111818958,111815641,111809181,111805893,111803839,111803530,111802506,111800871,111794894,111794323,111794131,111792555,111788320,111785477,111784400,111783964,111782507,111780385,111778770,111777057,111772475,111769406 Gene ID= ENSG00000153107.11 TPM= 7.24 Transcript Type= protein_coding chr2 111898479 112029561 111898479 112029561 + ENST00000295408.8@MERTK ENST00000295408.8 protein_coding 111898479,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112003904,112008383,112009948,112019413,112021422,112022258,112028351 111898796,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003187,112003984,112008475,112010066,112019522,112021581,112022394,112029561 Gene ID= ENSG00000153208.16 TPM= 35.32 Transcript Type= protein_coding chr2 111898580 112040637 111898580 112040637 + transcript3172.chr2.nnic@MERTK transcript3172.chr2.nnic protein_coding 111898580,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112003904,112008383,112009948,112019413,112021422,112022258,112039351 111898796,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003187,112003984,112008475,112010066,112019522,112021581,112022394,112040637 Gene ID= ENSG00000153208.16 TPM= 5.43 Transcript Type= NA chr2 111898607 112029369 111898607 112029369 + transcript3179.chr2.nic@MERTK transcript3179.chr2.nic protein_coding 111898607,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112008383,112009948,112019413,112021422,112022258,112028351 111898796,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003984,112008475,112010066,112019522,112021581,112022394,112029369 Gene ID= ENSG00000153208.16 TPM= 8.6 Transcript Type= NA chr2 111898850 112029369 111898850 112029369 + transcript3180.chr2.nnic@MERTK transcript3180.chr2.nnic protein_coding 111898850,111929120,111944960,111947394,111965191,111968137,111975289,111982842,111994251,111997323,112001201,112003092,112008383,112009948,112019413,112021422,112022258,112028351 111899137,111929540,111945060,111947567,111965277,111968252,111975472,111982993,111994404,111997476,112001286,112003984,112008475,112010066,112019522,112021581,112022394,112029369 Gene ID= ENSG00000153208.16 TPM= 3.17 Transcript Type= NA chr2 112055266 112116492 112055266 112116492 + transcript3185.chr2.nnic@TMEM87B transcript3185.chr2.nnic protein_coding 112055266,112059977,112064162,112066936,112074912,112077192,112081057,112081335,112086005,112089625,112091712,112097044,112097233,112098595,112100622,112106002,112107788,112116084 112055756,112060037,112064253,112067067,112074962,112077282,112081118,112081518,112086104,112089718,112091783,112097152,112097291,112098698,112100695,112106075,112107840,112116492 Gene ID= ENSG00000153214.9 TPM= 1.81 Transcript Type= NA chr2 112055328 112119314 112055328 112119314 + transcript3186.chr2.nic@TMEM87B transcript3186.chr2.nic protein_coding 112055328,112059977,112064162,112066936,112077192,112081057,112081335,112086005,112089625,112091712,112097044,112097233,112098595,112100622,112106002,112107788,112112899,112116084 112055756,112060037,112064253,112067067,112077282,112081118,112081518,112086104,112089718,112091783,112097152,112097291,112098698,112100695,112106075,112107840,112112929,112119314 Gene ID= ENSG00000153214.9 TPM= 1.81 Transcript Type= NA chr2 112055223 112119318 112055223 112119318 + ENST00000283206.8@TMEM87B ENST00000283206.8 protein_coding 112055223,112059977,112064162,112066936,112074912,112077192,112081057,112081335,112086005,112089625,112091712,112097044,112097233,112098595,112100622,112106002,112107788,112112899,112116084 112055756,112060037,112064253,112067067,112074962,112077282,112081118,112081518,112086104,112089718,112091783,112097152,112097291,112098698,112100695,112106075,112107840,112112929,112119318 Gene ID= ENSG00000153214.9 TPM= 40.75 Transcript Type= protein_coding chr2 112138385 112188216 112138385 112188216 + ENST00000331203.6@FBLN7 ENST00000331203.6 protein_coding 112138385,112159676,112165001,112175714,112181739,112182791,112185201,112187134 112138730,112159835,112165171,112175839,112181876,112182928,112185339,112188216 Gene ID= ENSG00000144152.12 TPM= 9.06 Transcript Type= protein_coding chr2 112211525 112255111 112211525 112255111 - ENST00000409573.6@ZC3H8 ENST00000409573.6 protein_coding 112254908,112250191,112238315,112236562,112234120,112233260,112231838,112230903,112211525 112255111,112250272,112238528,112236695,112234236,112233371,112231947,112230950,112216468 Gene ID= ENSG00000144161.12 TPM= 4.53 Transcript Type= protein_coding chr2 112275572 112312186 112275572 112312186 + transcript3195.chr2.nic@ZC3H6 transcript3195.chr2.nic protein_coding 112275572,112299849,112303229,112309885,112311804 112276026,112300029,112303351,112310161,112312186 Gene ID= ENSG00000188177.13 TPM= 1.81 Transcript Type= NA chr2 112370092 112433645 112370092 112433645 - ENST00000302558.7@RGPD8 ENST00000302558.7 protein_coding 112433382,112424240,112422548,112421960,112417684,112417193,112412431,112406297,112403966,112401667,112401408,112401117,112400036,112399632,112399223,112398099,112397922,112394618,112390975,112388024,112380824,112378053,112370092 112433645,112424307,112422659,112422112,112417914,112417338,112412626,112406384,112404175,112401848,112401583,112401240,112400194,112399769,112399369,112398278,112398005,112394753,112391069,112390247,112380963,112378254,112370212 Gene ID= ENSG00000169629.11 TPM= 1.81 Transcript Type= protein_coding chr2 112482121 112532404 112482121 112532404 + transcript3197.chr2.nnic@TTL transcript3197.chr2.nnic protein_coding 112482121,112485917,112494143,112501206,112502912,112520282,112521222,112528681 112482501,112485995,112494375,112501341,112503181,112520425,112521341,112532404 Gene ID= ENSG00000114999.7 TPM= 8.15 Transcript Type= NA chr2 112482171 112532409 112482171 112532409 + transcript3200.chr2.nnic@TTL transcript3200.chr2.nnic protein_coding 112482171,112494143,112501206,112502912,112520282,112528681 112482501,112494375,112501341,112503181,112520425,112532409 Gene ID= ENSG00000114999.7 TPM= 5.43 Transcript Type= NA chr2 112584441 112589040 112584441 112589040 + ENST00000324913.9@CHCHD5 ENST00000324913.9 protein_coding 112584441,112585974,112586200,112588866 112584649,112586114,112586365,112589040 Gene ID= ENSG00000125611.15 TPM= 37.13 Transcript Type= protein_coding chr2 112645898 112663821 112645898 112663821 + transcript3207.chr2.nic@SLC20A1 transcript3207.chr2.nic protein_coding 112645898,112646563,112647324,112647653,112652702,112657122,112658951,112659204,112660387,112661142,112662864 112646129,112647162,112647464,112647738,112652798,112657241,112659094,112659762,112660572,112661226,112663821 Gene ID= ENSG00000144136.10 TPM= 2.26 Transcript Type= NA chr2 112645857 112663827 112645857 112663827 + ENST00000272542.7@SLC20A1 ENST00000272542.7 protein_coding 112645857,112646563,112647324,112647653,112652702,112657122,112658825,112659204,112660387,112661142,112662864 112646129,112647162,112647464,112647738,112652798,112657241,112659094,112659762,112660572,112661226,112663827 Gene ID= ENSG00000144136.10 TPM= 38.49 Transcript Type= protein_coding chr2 113157440 113203232 113157440 113203232 + transcript3211.chr2.nnic@PSD4 transcript3211.chr2.nnic protein_coding 113157440,113182346,113182658,113184957,113185365,113185877,113192380,113193048,113193258,113193592,113193859,113195727,113196147,113197564,113197750,113198740,113199083,113201158 113157535,113182578,113183512,113185073,113185440,113186255,113192589,113193128,113193370,113193650,113193948,113195770,113196307,113197634,113197913,113198884,113199226,113203232 Gene ID= ENSG00000125637.15 TPM= 3.78 Transcript Type= NA chr2 113157338 113203232 113157338 113203232 + transcript3214.chr2.nic@PSD4 transcript3214.chr2.nic protein_coding 113157338,113182346,113184957,113185365,113185877,113192380,113193048,113193258,113193592,113193859,113195727,113196147,113197564,113197747,113198740,113199083,113201158 113157535,113183512,113185073,113185440,113186255,113192589,113193128,113193370,113193650,113193948,113195770,113196307,113197634,113197913,113198884,113199226,113203232 Gene ID= ENSG00000125637.15 TPM= 8.76 Transcript Type= NA chr2 113198558 113202912 113198558 113202912 + ENST00000464559.1@PSD4 ENST00000464559.1 protein_coding 113198558,113201158 113199226,113202912 Gene ID= ENSG00000125637.15 TPM= 17.21 Transcript Type= retained_intron chr2 113211482 113266939 113211482 113266939 + transcript3222.chr2.nnic@PAX8-AS1 transcript3222.chr2.nnic processed_transcript 113211482,113225602,113263278,113265476 113211619,113225677,113263454,113266939 Gene ID= ENSG00000189223.14 TPM= 1.81 Transcript Type= NA chr2 113325082 113396399 113325082 113396399 + transcript3225.chr2.nnic@NA transcript3225.chr2.nnic NA 113325082,113328679,113393741 113325553,113328777,113396399 Gene ID= novel_gene_chr2_3226 TPM= 4.53 Transcript Type= NA chr2 113437791 113496119 113437791 113496119 + ENST00000358604.7@CBWD2 ENST00000358604.7 protein_coding 113437791,113439020,113441351,113443767,113444964,113453139,113454741,113460673,113462408,113465129,113471033,113482177,113493757,113493929,113495120,113495637 113438022,113439117,113441437,113443863,113445055,113453198,113454778,113460719,113462494,113465173,113471089,113482228,113493825,113493994,113495249,113496119 Gene ID= ENSG00000136682.14 TPM= 11.77 Transcript Type= nonsense_mediated_decay chr2 113584097 113599078 113584097 113599078 + transcript3246.chr2.nnic@WASH2P transcript3246.chr2.nnic transcribed_unprocessed_pseudogene 113584097,113588550,113595063,113595369,113595693,113596381,113596671,113597486,113598398,113598607 113584136,113588703,113595161,113595515,113596203,113596578,113596829,113597638,113598466,113599078 Gene ID= ENSG00000146556.14 TPM= 14.04 Transcript Type= NA chr2 113588550 113599034 113588550 113599034 + ENST00000453662.6@WASH2P ENST00000453662.6 transcribed_unprocessed_pseudogene 113588550,113595063,113595369,113595693,113596068,113596381,113596671,113597486,113598398,113598607 113588703,113595161,113595515,113595829,113596203,113596582,113596829,113597638,113598466,113599034 Gene ID= ENSG00000146556.14 TPM= 51.16 Transcript Type= transcribed_unprocessed_pseudogene chr2 113599021 113603817 113599021 113603817 - transcript3253.chr2.nnic@DDX11L2 transcript3253.chr2.nnic unprocessed_pseudogene 113603595,113601212,113599021 113603817,113601429,113600826 Gene ID= ENSG00000236397.3 TPM= 11.77 Transcript Type= NA chr2 113609688 113627131 113609688 113627131 - transcript3262.chr2.nnic@RPL23AP7 transcript3262.chr2.nnic transcribed_processed_pseudogene 113626881,113625609,113609688 113627131,113625729,113612247 Gene ID= ENSG00000240356.6 TPM= 18.11 Transcript Type= NA chr2 113611684 113627090 113611684 113627090 - ENST00000391616.3@RPL23AP7 ENST00000391616.3 transcribed_processed_pseudogene 113627038,113625609,113611684 113627090,113625729,113612247 Gene ID= ENSG00000240356.6 TPM= 2.72 Transcript Type= processed_transcript chr2 113627229 113643396 113627229 113643396 + ENST00000393167.7@RABL2A ENST00000393167.7 protein_coding 113627229,113628554,113632915,113634153,113635051,113640894,113641356,113641781,113642031 113627400,113628713,113632944,113634232,113635130,113641005,113641450,113641864,113643396 Gene ID= ENSG00000144134.18 TPM= 4.53 Transcript Type= protein_coding chr2 113712228 113756619 113712228 113756619 - transcript3281.chr2.nnic@SLC35F5 transcript3281.chr2.nnic protein_coding 113756468,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113717753,113712228 113756619,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113717850,113715195 Gene ID= ENSG00000115084.13 TPM= 62.78 Transcript Type= NA chr2 113711381 113756652 113711381 113756652 - transcript3282.chr2.nnic@SLC35F5 transcript3282.chr2.nnic protein_coding 113756370,113755454,113755165,113750425,113746277,113743713,113742692,113735777,113734586,113731584,113729401,113725378,113723104,113719154,113711381 113756652,113755544,113755306,113750568,113746339,113743794,113742879,113735858,113734673,113731648,113729505,113725537,113723194,113719308,113715195 Gene ID= ENSG00000115084.13 TPM= 146.54 Transcript Type= NA chr2 113741909 113756587 113741909 113756587 - ENST00000498768.1@SLC35F5 ENST00000498768.1 protein_coding 113756370,113755454,113755165,113750425,113746277,113743713,113741909 113756587,113755544,113755306,113750568,113746339,113743794,113742879 Gene ID= ENSG00000115084.13 TPM= 3.62 Transcript Type= retained_intron chr2 113890087 113959928 113890087 113959928 + transcript3300.chr2.nnic@ACTR3 transcript3300.chr2.nnic protein_coding 113890087,113890296,113913172,113916884,113927345,113931301,113934279,113939959,113942186,113951479,113951720,113955623,113957360 113890237,113890323,113913227,113917008,113927455,113931396,113934386,113940102,113942359,113951571,113951845,113955706,113959928 Gene ID= ENSG00000115091.11 TPM= 11.77 Transcript Type= NA chr2 115161405 115843330 115161405 115843330 + transcript3315.chr2.nnic@DPP10 transcript3315.chr2.nnic protein_coding 115161405,115309239,115343817,115499510,115525898,115689687,115689840,115727816,115739739,115746086,115753174,115768297,115777208,115777787,115780874,115782352,115791081,115791287,115814793,115815675,115836157,115836507,115836674,115840750,115842211 115162028,115309353,115343912,115499604,115525972,115689739,115689921,115727936,115739893,115746183,115753297,115768404,115777299,115777834,115780995,115782399,115791179,115791356,115814987,115815729,115836256,115836565,115836746,115840823,115843330 Gene ID= ENSG00000175497.16 TPM= 2.72 Transcript Type= NA chr2 117814650 117832379 117814650 117832379 + ENST00000263239.6@DDX18 ENST00000263239.6 protein_coding 117814650,117817444,117819649,117821161,117821650,117821862,117822147,117824569,117824940,117825447,117826269,117828949,117829289,117830582 117814862,117817728,117819792,117821296,117821750,117822061,117822261,117824708,117825101,117825599,117826382,117829005,117829466,117832379 Gene ID= ENSG00000088205.12 TPM= 41.2 Transcript Type= protein_coding chr2 117814663 117831051 117814663 117831051 + transcript3327.chr2.nnic@DDX18 transcript3327.chr2.nnic protein_coding 117814663,117817444,117819649,117821161,117821650,117821862,117822147,117824569,117824940,117825447,117826269,117829421,117830582 117814862,117817728,117819792,117821296,117821750,117822061,117822261,117824708,117825101,117825599,117826382,117829466,117831051 Gene ID= ENSG00000088205.12 TPM= 4.07 Transcript Type= NA chr2 117915478 118014133 117915478 118014133 - ENST00000376300.6@CCDC93 ENST00000376300.6 protein_coding 118013954,118008545,118006722,118000821,117996264,117995446,117985969,117977994,117975188,117974850,117973908,117958365,117952373,117949322,117948105,117946811,117945529,117944024,117941189,117939029,117936702,117935495,117931037,117915478 118014133,118008658,118006816,118000932,117996362,117995502,117986069,117978030,117975280,117974900,117973994,117958481,117952435,117949395,117948186,117946882,117945582,117944086,117941297,117939111,117936739,117935579,117931150,117920396 Gene ID= ENSG00000125633.10 TPM= 11.77 Transcript Type= protein_coding chr2 118088430 118110029 118088430 118110029 + transcript3332.chr2.nnic@INSIG2 transcript3332.chr2.nnic protein_coding 118088430,118096419,118103197,118107090,118108281 118088541,118096800,118103281,118107189,118110029 Gene ID= ENSG00000125629.14 TPM= 1.81 Transcript Type= NA chr2 118088474 118110028 118088474 118110028 + ENST00000245787.8@INSIG2 ENST00000245787.8 protein_coding 118088474,118096419,118103197,118106737,118107090,118108281 118088541,118096800,118103321,118106903,118107189,118110028 Gene ID= ENSG00000125629.14 TPM= 29.88 Transcript Type= protein_coding chr2 118942166 118994660 118942166 118994660 + ENST00000327097.4@MARCO ENST00000327097.4 protein_coding 118942166,118969160,118970114,118971499,118974333,118974521,118977471,118977828,118981409,118981621,118982156,118982348,118990589,118991777,118992432,118993124,118994387 118942397,118969261,118970338,118971534,118974440,118974565,118977515,118977935,118981507,118981656,118982254,118982410,118990633,118991875,118992476,118993300,118994660 Gene ID= ENSG00000019169.10 TPM= 86.48 Transcript Type= protein_coding chr2 118942222 118994664 118942222 118994664 + transcript3335.chr2.nnic@MARCO transcript3335.chr2.nnic protein_coding 118942222,118974333,118974521,118977471,118977828,118981409,118981621,118982156,118982348,118990589,118991777,118992432,118993124,118994387 118942397,118974440,118974565,118977515,118977935,118981507,118981656,118982254,118982410,118990633,118991875,118992476,118993300,118994664 Gene ID= ENSG00000019169.10 TPM= 5.89 Transcript Type= NA chr2 119223821 119265650 119223821 119265650 + transcript3339.chr2.nnic@STEAP3 transcript3339.chr2.nnic protein_coding 119223821,119230620,119239363,119245489,119247679,119254684,119263057 119223888,119231034,119239430,119245988,119248206,119254848,119265650 Gene ID= ENSG00000115107.19 TPM= 9.06 Transcript Type= NA chr2 119223834 119265650 119223834 119265650 + transcript3341.chr2.nnic@STEAP3 transcript3341.chr2.nnic protein_coding 119223834,119230740,119239363,119245489,119247679,119254684,119263057 119223888,119231034,119239430,119245988,119248206,119254848,119265650 Gene ID= ENSG00000115107.19 TPM= 4.53 Transcript Type= NA chr2 119223821 119265650 119223821 119265650 + transcript3346.chr2.nnic@STEAP3 transcript3346.chr2.nnic protein_coding 119223821,119239313,119245489,119247679,119254684,119263057 119223888,119239430,119245988,119248206,119254848,119265650 Gene ID= ENSG00000115107.19 TPM= 4.53 Transcript Type= NA chr2 119223831 119265652 119223831 119265652 + ENST00000393106.6@STEAP3 ENST00000393106.6 protein_coding 119223831,119239363,119245489,119247679,119254684,119263057 119223888,119239430,119245988,119248206,119254848,119265652 Gene ID= ENSG00000115107.19 TPM= 10.87 Transcript Type= protein_coding chr2 119223831 119265652 119223831 119265652 + ENST00000393110.6@STEAP3 ENST00000393110.6 protein_coding 119223831,119230620,119245489,119247679,119254684,119263057 119223888,119231034,119245988,119248206,119254848,119265652 Gene ID= ENSG00000115107.19 TPM= 10.87 Transcript Type= protein_coding chr2 119302220 119366850 119302220 119366850 - transcript3354.chr2.nnic@C2orf76 transcript3354.chr2.nnic protein_coding 119366790,119339827,119317466,119311622,119302220 119366850,119339971,119317503,119311703,119302548 Gene ID= ENSG00000186132.14 TPM= 1.81 Transcript Type= NA chr2 119302228 119366828 119302228 119366828 - ENST00000334816.11@C2orf76 ENST00000334816.11 protein_coding 119366790,119339827,119321154,119317466,119311622,119302228 119366828,119339971,119321204,119317503,119311703,119302548 Gene ID= ENSG00000186132.14 TPM= 6.34 Transcript Type= protein_coding chr2 119366921 119372560 119366921 119372560 + ENST00000355857.7@DBI ENST00000355857.7 protein_coding 119366921,119368188,119370740,119372245 119367060,119368305,119370802,119372560 Gene ID= ENSG00000155368.16 TPM= 145.34 Transcript Type= protein_coding chr2 119367070 119372546 119367070 119372546 + ENST00000311521.8@DBI ENST00000311521.8 protein_coding 119367070,119367559,119368188,119370740,119372245 119367214,119367644,119368305,119370802,119372546 Gene ID= ENSG00000155368.16 TPM= 2.26 Transcript Type= protein_coding chr2 119431869 119438520 119431869 119438520 + ENST00000306406.4@TMEM37 ENST00000306406.4 protein_coding 119431869,119436889 119431924,119438520 Gene ID= ENSG00000171227.6 TPM= 42.56 Transcript Type= protein_coding chr2 119439843 119524494 119439843 119524494 - ENST00000019103.7@SCTR ENST00000019103.7 protein_coding 119524155,119494428,119478811,119473453,119465789,119464123,119461847,119453287,119452010,119448689,119446759,119441558,119439843 119524494,119494548,119478918,119473556,119465886,119464255,119462000,119453347,119452079,119448780,119446885,119441599,119440257 Gene ID= ENSG00000080293.9 TPM= 1.81 Transcript Type= protein_coding chr2 119544429 119632671 119544429 119632671 + transcript3365.chr2.nic@CFAP221 transcript3365.chr2.nic protein_coding 119544429,119546085,119549085,119559689,119559928,119562014,119587119,119601218,119604672,119604876,119605181,119608502,119611653,119615611,119625583,119627653,119629875,119630570,119630767 119544510,119546270,119549185,119559775,119560026,119562114,119587222,119601377,119604792,119604987,119605289,119608589,119611742,119615709,119625688,119627786,119629955,119630677,119632671 Gene ID= ENSG00000163075.12 TPM= 4.53 Transcript Type= NA chr2 119544498 119632671 119544498 119632671 + transcript3366.chr2.nnic@CFAP221 transcript3366.chr2.nnic protein_coding 119544498,119546085,119549085,119559689,119559928,119562014,119587119,119601218,119604672,119604876,119605181,119608502,119611653,119615611,119625583,119627653,119629875,119630570,119630767 119544779,119546270,119549185,119559775,119560026,119562114,119587222,119601377,119604792,119604987,119605289,119608589,119611742,119615709,119625688,119627786,119629955,119630677,119632671 Gene ID= ENSG00000163075.12 TPM= 1.81 Transcript Type= NA chr2 119544425 119603741 119544425 119603741 + transcript3367.chr2.nic@CFAP221 transcript3367.chr2.nic protein_coding 119544425,119546085,119549085,119559689,119559928,119562014,119587119,119601218 119544510,119546270,119549185,119559775,119560026,119562114,119587222,119603741 Gene ID= ENSG00000163075.12 TPM= 4.53 Transcript Type= NA chr2 119544471 119656661 119544471 119656661 + ENST00000413369.7@CFAP221 ENST00000413369.7 protein_coding 119544471,119546085,119549085,119559689,119559928,119562014,119587119,119601218,119604672,119604876,119605181,119608502,119611653,119615611,119625583,119627653,119629875,119630570,119630767,119638259,119639781,119646958,119651974,119656362 119544510,119546270,119549185,119559775,119560026,119562114,119587222,119601377,119604792,119604987,119605289,119608589,119611742,119615709,119625688,119627786,119629955,119630677,119630901,119638417,119639872,119647050,119652069,119656661 Gene ID= ENSG00000163075.12 TPM= 1.81 Transcript Type= protein_coding chr2 119679167 119682118 119679167 119682118 + ENST00000401466.5@TMEM177 ENST00000401466.5 protein_coding 119679167,119680832 119679225,119682118 Gene ID= ENSG00000144120.12 TPM= 12.68 Transcript Type= protein_coding chr2 119679170 119682118 119679170 119682118 + ENST00000272521.6@TMEM177 ENST00000272521.6 protein_coding 119679170,119680832 119679276,119682118 Gene ID= ENSG00000144120.12 TPM= 3.62 Transcript Type= protein_coding chr2 119723199 119759798 119723199 119759798 - transcript3382.chr2.nnic@NA transcript3382.chr2.nnic NA 119759632,119730286,119723199 119759798,119730375,119723319 Gene ID= novel_gene_chr2_3383 TPM= 2.72 Transcript Type= NA chr2 119727441 119759717 119727441 119759717 - transcript3384.chr2.nnic@NA transcript3384.chr2.nnic NA 119759632,119730286,119727441 119759717,119730375,119728856 Gene ID= novel_gene_chr2_3385 TPM= 1.81 Transcript Type= NA chr2 119759631 119983818 119759631 119983818 + ENST00000263708.6@PTPN4 ENST00000263708.6 protein_coding 119759631,119809837,119862536,119877323,119877464,119881786,119882097,119882503,119885795,119900718,119915179,119920069,119926598,119932424,119934800,119945081,119946341,119946518,119951973,119955157,119956844,119957016,119960807,119962616,119965497,119967837,119976984 119760384,119809991,119862643,119877365,119877542,119881830,119882149,119882623,119885882,119900806,119915242,119920241,119926666,119932549,119934958,119945240,119946424,119946574,119952129,119955323,119956934,119957077,119960953,119962744,119965645,119967972,119983818 Gene ID= ENSG00000088179.8 TPM= 7.24 Transcript Type= protein_coding chr2 120013005 120179119 120013005 120179119 + ENST00000263713.9@EPB41L5 ENST00000263713.9 protein_coding 120013005,120019077,120042006,120073178,120074100,120075476,120075701,120076971,120077229,120078493,120087171,120090347,120091555,120093249,120100244,120100699,120127688,120131618,120143003,120146225,120160881,120164836,120167466,120167877,120174841 120013210,120019264,120042110,120073220,120074178,120075520,120075753,120077091,120077316,120078581,120087240,120090516,120091661,120093276,120100286,120100814,120127851,120131715,120143131,120146289,120160974,120164910,120167507,120168007,120179119 Gene ID= ENSG00000115109.13 TPM= 19.02 Transcript Type= protein_coding chr2 120252845 120294725 120252845 120294725 + transcript3398.chr2.nnic@RALB transcript3398.chr2.nnic protein_coding 120252845,120278618,120289580,120293141 120252980,120278778,120289757,120294725 Gene ID= ENSG00000144118.13 TPM= 6.64 Transcript Type= NA chr2 121337776 121649476 121337776 121649476 - ENST00000541377.5@CLASP1 ENST00000541377.5 protein_coding 121649372,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448276,121447337,121445449,121430073,121425139,121410866,121409024,121407471,121404371,121401868,121401509,121398322,121397140,121387763,121387122,121377499,121367588,121365094,121363172,121348512,121347038,121337776 121649476,121606180,121530325,121528780,121527890,121525920,121515762,121503234,121469960,121462605,121461193,121460125,121458975,121457757,121451849,121450990,121449120,121448325,121447507,121445496,121430177,121425306,121410969,121409047,121407712,121404434,121401870,121401672,121398400,121397283,121387906,121387228,121377649,121367831,121365284,121363300,121348718,121347154,121340947 Gene ID= ENSG00000074054.17 TPM= 15.39 Transcript Type= protein_coding chr2 121410789 121649463 121410789 121649463 - transcript3406.chr2.nnic@CLASP1 transcript3406.chr2.nnic protein_coding 121649374,121605701,121530247,121528677,121527799,121525845,121515665,121503167,121469808,121462532,121461101,121459980,121458840,121457687,121451790,121450913,121448953,121448282,121447337,121445449,121430073,121425139,121410789 121649463,121606187,121530327,121528780,121527892,121525920,121515762,121503236,121469960,121462607,121461195,121460125,121458975,121457759,121451849,121450990,121449120,121448325,121447512,121445496,121430177,121425306,121410969 Gene ID= ENSG00000074054.17 TPM= 25.36 Transcript Type= NA chr2 121650082 121651535 121650082 121651535 + ENST00000447668.2@NIFK-AS1 ENST00000447668.2 antisense_RNA 121650082,121650468 121650381,121651535 Gene ID= ENSG00000236859.6 TPM= 2.72 Transcript Type= antisense_RNA chr2 121726945 121736923 121726945 121736923 - ENST00000285814.8@NIFK ENST00000285814.8 protein_coding 121736746,121735613,121732096,121730893,121728477,121728288,121726945 121736923,121735750,121732204,121731104,121728536,121728356,121727912 Gene ID= ENSG00000155438.11 TPM= 31.69 Transcript Type= protein_coding chr2 121755533 121767853 121755533 121767853 + ENST00000389682.7@TSN ENST00000389682.7 protein_coding 121755533,121757240,121758710,121761409,121763005,121765134 121755845,121757333,121758806,121761524,121763084,121767853 Gene ID= ENSG00000211460.11 TPM= 145.34 Transcript Type= protein_coding chr2 121755659 121767294 121755659 121767294 + ENST00000467324.5@TSN ENST00000467324.5 protein_coding 121755659,121757240,121758710,121761409,121763005,121765134 121755953,121757333,121758806,121761524,121763084,121767294 Gene ID= ENSG00000211460.11 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr2 126655933 126696670 126655933 126696670 + ENST00000259254.8@GYPC ENST00000259254.8 protein_coding 126655933,126690255,126693864,126695946 126656312,126690311,126693947,126696670 Gene ID= ENSG00000136732.14 TPM= 117.27 Transcript Type= protein_coding chr2 126656184 126696664 126656184 126696664 + ENST00000409836.3@GYPC ENST00000409836.3 protein_coding 126656184,126693864,126695946 126656312,126693947,126696664 Gene ID= ENSG00000136732.14 TPM= 14.04 Transcript Type= protein_coding chr2 127048038 127107278 127048038 127107278 - ENST00000409400.1@BIN1 ENST00000409400.1 protein_coding 127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127051154,127050802,127050421,127048038 127107278,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127051243,127050912,127050522,127048633 Gene ID= ENSG00000136717.14 TPM= 144.1 Transcript Type= protein_coding chr2 127048027 127107288 127048027 127107288 - ENST00000348750.8@BIN1 ENST00000348750.8 protein_coding 127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127050802,127050421,127048027 127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127050912,127050522,127048633 Gene ID= ENSG00000136717.14 TPM= 28.8 Transcript Type= protein_coding chr2 127048027 127107288 127048027 127107288 - ENST00000393040.7@BIN1 ENST00000393040.7 protein_coding 127106860,127076626,127070762,127070553,127069995,127068924,127063933,127063571,127062115,127059011,127057473,127051154,127050802,127050421,127048027 127107288,127076706,127070816,127070647,127070090,127069031,127064018,127063646,127062197,127059155,127057601,127051243,127050912,127050522,127048633 Gene ID= ENSG00000136717.14 TPM= 56.26 Transcript Type= protein_coding chr2 127257283 127294174 127257283 127294174 - transcript3451.chr2.nic@ERCC3 transcript3451.chr2.nic protein_coding 127294054,127293513,127292610,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257283 127294174,127293718,127292846,127290273,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727 Gene ID= ENSG00000163161.12 TPM= 2.11 Transcript Type= NA chr2 127257283 127294174 127257283 127294174 - transcript3454.chr2.nic@ERCC3 transcript3454.chr2.nic protein_coding 127294054,127293513,127292610,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257283 127294174,127293718,127292846,127290273,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727 Gene ID= ENSG00000163161.12 TPM= 3.02 Transcript Type= NA chr2 127257290 127294176 127257290 127294176 - ENST00000285398.6@ERCC3 ENST00000285398.6 protein_coding 127294054,127293513,127292610,127290224,127289689,127289337,127288660,127286703,127280447,127279173,127272865,127271336,127261228,127259296,127257290 127294176,127293718,127292846,127290273,127289824,127289501,127288864,127287017,127280631,127279375,127272961,127271453,127261346,127259448,127257727 Gene ID= ENSG00000163161.12 TPM= 73.65 Transcript Type= protein_coding chr2 127304347 127387978 127304347 127387978 - transcript3459.chr2.nic@MAP3K2 transcript3459.chr2.nic protein_coding 127387452,127343126,127338932,127337738,127335870,127330392,127329921,127326687,127325728,127324174,127323902,127322046,127318169,127317629,127314754,127308585,127304347 127387978,127343194,127339050,127337778,127335969,127330505,127330008,127326817,127325807,127324241,127323994,127322252,127318317,127317760,127314883,127308762,127307804 Gene ID= ENSG00000169967.16 TPM= 15.39 Transcript Type= NA chr2 127387491 127389409 127387491 127389409 + transcript3461.chr2.nnic@AC068282.1 transcript3461.chr2.nnic lincRNA 127387491,127388881,127389111 127388311,127388998,127389409 Gene ID= ENSG00000236682.1 TPM= 2.72 Transcript Type= NA chr2 127480804 127526474 127480804 127526474 - transcript3468.chr2.nic@IWS1 transcript3468.chr2.nic protein_coding 127526175,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127480804 127526474,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127481175 Gene ID= ENSG00000163166.14 TPM= 1.81 Transcript Type= NA chr2 127480806 127526468 127480806 127526468 - ENST00000295321.8@IWS1 ENST00000295321.8 protein_coding 127526175,127523676,127504684,127503387,127502815,127498140,127495998,127494872,127493281,127491971,127489832,127489179,127486553,127480806 127526468,127523791,127505752,127503576,127502872,127498237,127496148,127494954,127493410,127492088,127489943,127489235,127486664,127481175 Gene ID= ENSG00000163166.14 TPM= 26.26 Transcript Type= protein_coding chr2 127638428 127675190 127638428 127675190 - ENST00000355119.8@LIMS2 ENST00000355119.8 protein_coding 127675014,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638428 127675190,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428 Gene ID= ENSG00000072163.19 TPM= 11.77 Transcript Type= protein_coding chr2 127638426 127664546 127638426 127664546 - ENST00000324938.9@LIMS2 ENST00000324938.9 protein_coding 127664306,127657403,127654830,127654424,127642923,127642049,127640896,127640270,127640070,127638426 127664546,127657562,127654896,127654544,127643072,127642199,127640988,127640318,127640145,127639428 Gene ID= ENSG00000072163.19 TPM= 4.53 Transcript Type= protein_coding chr2 127705289 127811182 127705289 127811182 - transcript3480.chr2.nnic@WDR33 transcript3480.chr2.nnic protein_coding 127811012,127770778,127768933,127768189,127765174,127764828,127763062,127726651,127725061,127724887,127724333,127723253,127722958,127722591,127721836,127719265,127717155,127709693,127709490,127708677,127705289 127811182,127771004,127769001,127768293,127765269,127764979,127763159,127726777,127725215,127724965,127724443,127723347,127723044,127722730,127721988,127720353,127717263,127709856,127709582,127708892,127706552 Gene ID= ENSG00000136709.11 TPM= 7.24 Transcript Type= NA chr2 127762533 127811171 127762533 127811171 - ENST00000409658.7@WDR33 ENST00000409658.7 protein_coding 127811012,127770778,127768933,127768189,127765174,127762533 127811171,127771004,127769001,127768293,127765269,127764979 Gene ID= ENSG00000136709.11 TPM= 24.45 Transcript Type= protein_coding chr2 127843551 127858157 127843551 127858157 - ENST00000272645.8@POLR2D ENST00000272645.8 protein_coding 127858028,127852925,127850590,127843551 127858157,127853105,127850685,127848185 Gene ID= ENSG00000144231.10 TPM= 37.13 Transcript Type= protein_coding chr2 127845394 127858144 127845394 127858144 - transcript3489.chr2.nnic@POLR2D transcript3489.chr2.nnic protein_coding 127858028,127850590,127845394 127858144,127850685,127848185 Gene ID= ENSG00000144231.10 TPM= 13.58 Transcript Type= NA chr2 127861634 127886090 127861634 127886090 - transcript3491.chr2.nnic@AMMECR1L transcript3491.chr2.nnic protein_coding 127885810,127884203,127873828,127871249,127870814,127869454,127867145,127866900,127861634 127886090,127884312,127874272,127871359,127870928,127869544,127867279,127866996,127865205 Gene ID= ENSG00000144233.9 TPM= 4.07 Transcript Type= NA chr2 127861630 127885922 127861630 127885922 - ENST00000272647.9@AMMECR1L ENST00000272647.9 protein_coding 127885810,127884203,127873828,127871249,127870814,127869454,127866900,127861630 127885922,127884312,127874272,127871359,127870928,127869544,127866996,127865205 Gene ID= ENSG00000144233.9 TPM= 7.7 Transcript Type= protein_coding chr2 127941217 128027295 127941217 128027295 - ENST00000357702.9@SAP130 ENST00000357702.9 protein_coding 128027092,128026181,128017680,128016389,128014803,128013030,128010269,128000307,128000056,127999741,127996350,127993187,127989564,127986785,127977985,127954986,127950160,127949869,127945456,127942424,127941217 128027295,128026298,128017915,128016547,128014914,128013154,128010393,128000454,128000146,127999845,127996491,127993308,127989866,127986962,127978089,127955344,127950408,127949994,127945559,127942537,127942164 Gene ID= ENSG00000136715.17 TPM= 2.72 Transcript Type= protein_coding chr2 128091211 128191428 128091211 128191428 + ENST00000376723.7@UGGT1 ENST00000376723.7 protein_coding 128091211,128097429,128103932,128107938,128109634,128113084,128115124,128116265,128120356,128121199,128123186,128127361,128129029,128133141,128134876,128138717,128143094,128145803,128152784,128155489,128156392,128157252,128159514,128160460,128161138,128164730,128170288,128171205,128172573,128173781,128174773,128176814,128177832,128178468,128179786,128180890,128182130,128183675,128186683,128187449,128189717 128091596,128097564,128104014,128108068,128109746,128113258,128115220,128116343,128120456,128121298,128123246,128127452,128129179,128133260,128134961,128138852,128143225,128145967,128152904,128155587,128156415,128157346,128159720,128160591,128161268,128164825,128170390,128171284,128172762,128173939,128174858,128176898,128177920,128178569,128179870,128181072,128182290,128183789,128186799,128187614,128191428 Gene ID= ENSG00000136731.12 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr2 128091311 128195677 128091311 128195677 + ENST00000259253.10@UGGT1 ENST00000259253.10 protein_coding 128091311,128097429,128103932,128107938,128109634,128113084,128115124,128116265,128120356,128121199,128123186,128127361,128129029,128133141,128134876,128138717,128143094,128145803,128152784,128155489,128156392,128157252,128159514,128160460,128161138,128164730,128170288,128171205,128172573,128173781,128174773,128176814,128177832,128178468,128179786,128180890,128182130,128183675,128186683,128187449,128189717 128091415,128097564,128104014,128108068,128109746,128113258,128115220,128116343,128120456,128121298,128123246,128127452,128129179,128133260,128134961,128138852,128143225,128145967,128152904,128155587,128156415,128157346,128159720,128160591,128161268,128164825,128170390,128171284,128172762,128173939,128174858,128176898,128177920,128178569,128179870,128181072,128182290,128183789,128186799,128187614,128195677 Gene ID= ENSG00000136731.12 TPM= 3.17 Transcript Type= protein_coding chr2 128265480 128318577 128265480 128318577 - ENST00000259241.6@HS6ST1 ENST00000259241.6 protein_coding 128318037,128265480 128318577,128268870 Gene ID= ENSG00000136720.6 TPM= 228.2 Transcript Type= protein_coding chr2 130151392 130183933 130151392 130183933 - transcript3515.chr2.nnic@SMPD4 transcript3515.chr2.nnic protein_coding 130182264,130176554,130174914,130173514,130173279,130172787,130172625,130172349,130167458,130164374,130161186,130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151392 130183933,130176637,130175000,130173656,130173354,130172895,130172677,130172500,130167590,130164445,130161272,130157396,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884 Gene ID= ENSG00000136699.19 TPM= 8.83 Transcript Type= NA chr2 130151392 130183933 130151392 130183933 - transcript3519.chr2.nnic@SMPD4 transcript3519.chr2.nnic protein_coding 130182264,130176554,130174914,130173514,130173279,130172787,130172625,130172349,130167458,130164374,130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151392 130183933,130176637,130175000,130173656,130173354,130172895,130172677,130172500,130167590,130164445,130157396,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884 Gene ID= ENSG00000136699.19 TPM= 7.02 Transcript Type= NA chr2 130151392 130159635 130151392 130159635 - transcript3525.chr2.nic@SMPD4 transcript3525.chr2.nic protein_coding 130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151392 130159635,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884 Gene ID= ENSG00000136699.19 TPM= 6.11 Transcript Type= NA chr2 130151408 130181601 130151408 130181601 - ENST00000351288.10@SMPD4 ENST00000351288.10 protein_coding 130181530,130176554,130174914,130173514,130173279,130172787,130172625,130172349,130167458,130164374,130157251,130156585,130156035,130155096,130154277,130153702,130153319,130153043,130151408 130181601,130176637,130175000,130173656,130173354,130172895,130172677,130172500,130167590,130164445,130157396,130156675,130156135,130155259,130154482,130153935,130153450,130153171,130152884 Gene ID= ENSG00000136699.19 TPM= 26.94 Transcript Type= protein_coding chr2 130181772 130190695 130181772 130190695 + ENST00000457492.5@MZT2B ENST00000457492.5 protein_coding 130181772,130182627,130190469 130181830,130182775,130190695 Gene ID= ENSG00000152082.13 TPM= 2.72 Transcript Type= protein_coding chr2 130181737 130190713 130181737 130190713 + ENST00000425361.5@MZT2B ENST00000425361.5 protein_coding 130181737,130182627,130190469 130181797,130182775,130190713 Gene ID= ENSG00000152082.13 TPM= 6.34 Transcript Type= protein_coding chr2 130182313 130190729 130182313 130190729 + ENST00000455239.1@MZT2B ENST00000455239.1 protein_coding 130182313,130190469 130182452,130190729 Gene ID= ENSG00000152082.13 TPM= 7.7 Transcript Type= protein_coding chr2 130342225 130346624 130342225 130346624 + ENST00000259239.7@IMP4 ENST00000259239.7 protein_coding 130342225,130343086,130344629,130345376,130345567,130345779,130346018,130346201,130346356 130342935,130343194,130344712,130345485,130345699,130345933,130346112,130346274,130346624 Gene ID= ENSG00000136718.9 TPM= 36.22 Transcript Type= protein_coding chr2 130342922 130347810 130342922 130347810 + ENST00000460766.5@IMP4 ENST00000460766.5 protein_coding 130342922,130344629,130345376,130345567,130345779,130346018,130346201,130346356 130343194,130344712,130345485,130345699,130345933,130346112,130346274,130347810 Gene ID= ENSG00000136718.9 TPM= 23.54 Transcript Type= retained_intron chr2 130356007 130375409 130356007 130375409 + ENST00000175756.9@PTPN18 ENST00000175756.9 protein_coding 130356007,130358867,130359233,130359397,130359608,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157 130356200,130358975,130359309,130359492,130359646,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130375409 Gene ID= ENSG00000072135.12 TPM= 9.21 Transcript Type= protein_coding chr2 130356028 130375406 130356028 130375406 + transcript3553.chr2.nic@PTPN18 transcript3553.chr2.nic protein_coding 130356028,130358867,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157 130356200,130358975,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130375406 Gene ID= ENSG00000072135.12 TPM= 10.11 Transcript Type= NA chr2 130356045 130374571 130356045 130374571 + ENST00000347849.7@PTPN18 ENST00000347849.7 protein_coding 130356045,130369133,130369765,130370048,130370557,130370705,130370875,130371199,130372257,130372873,130373157 130356200,130369201,130369827,130370190,130370623,130370782,130370964,130371287,130372483,130372947,130374571 Gene ID= ENSG00000072135.12 TPM= 3.32 Transcript Type= protein_coding chr2 131047875 131093448 131047875 131093448 - transcript3569.chr2.nnic@FAM168B transcript3569.chr2.nnic protein_coding 131093214,131082577,131079350,131071855,131055553,131055272,131052891,131047875 131093448,131082657,131079447,131071938,131055695,131055449,131053015,131052452 Gene ID= ENSG00000152102.17 TPM= 1.81 Transcript Type= NA chr2 131047875 131093457 131047875 131093457 - transcript3570.chr2.nnic@FAM168B transcript3570.chr2.nnic protein_coding 131093214,131091809,131082577,131071855,131055553,131055272,131052891,131047875 131093457,131091963,131082657,131071938,131055695,131055449,131053015,131052452 Gene ID= ENSG00000152102.17 TPM= 2.72 Transcript Type= NA chr2 131047876 131093428 131047876 131093428 - ENST00000409185.5@FAM168B ENST00000409185.5 protein_coding 131093332,131082577,131071855,131055553,131055272,131052891,131047876 131093428,131082657,131071938,131055695,131055449,131053015,131052452 Gene ID= ENSG00000152102.17 TPM= 28.07 Transcript Type= protein_coding chr2 131104847 131149851 131104847 131149851 + ENST00000403716.5@PLEKHB2 ENST00000403716.5 protein_coding 131104847,131120934,131125753,131126684,131130721,131132902,131140167,131144408,131146637 131105398,131120978,131125905,131126786,131130760,131132991,131140275,131144449,131149851 Gene ID= ENSG00000115762.16 TPM= 14.94 Transcript Type= protein_coding chr2 131104944 131149852 131104944 131149852 + ENST00000234115.10@PLEKHB2 ENST00000234115.10 protein_coding 131104944,131120934,131125753,131126684,131130721,131132902,131140170,131146637 131105398,131120978,131125905,131126786,131130760,131132991,131140275,131149852 Gene ID= ENSG00000115762.16 TPM= 193.33 Transcript Type= protein_coding chr2 131104847 131149851 131104847 131149851 + ENST00000439822.6@PLEKHB2 ENST00000439822.6 protein_coding 131104847,131120934,131125753,131126684,131140167,131146637 131105398,131120978,131125905,131126786,131140275,131149851 Gene ID= ENSG00000115762.16 TPM= 8.6 Transcript Type= protein_coding chr2 131483768 131493068 131483768 131493068 - transcript3600.chr2.nnic@MZT2A transcript3600.chr2.nnic protein_coding 131492992,131492207,131491876,131483768 131493068,131492719,131492024,131484218 Gene ID= ENSG00000173272.15 TPM= 24.68 Transcript Type= NA chr2 131483961 131492414 131483961 131492414 - transcript3602.chr2.nnic@MZT2A transcript3602.chr2.nnic protein_coding 131492207,131491876,131483961 131492414,131491972,131484218 Gene ID= ENSG00000173272.15 TPM= 6.27 Transcript Type= NA chr2 131483960 131492422 131483960 131492422 - ENST00000309451.6@MZT2A ENST00000309451.6 protein_coding 131492207,131491876,131483960 131492422,131492024,131484218 Gene ID= ENSG00000173272.15 TPM= 102.25 Transcript Type= protein_coding chr2 131518444 131521574 131518444 131521574 + transcript3608.chr2.nic@AC073869.1 transcript3608.chr2.nic transcribed_processed_pseudogene 131518444,131519535,131520097 131519283,131519666,131521574 Gene ID= ENSG00000152117.17 TPM= 9.96 Transcript Type= NA chr2 131492813 131521573 131492813 131521573 + ENST00000438378.2@AC073869.1 ENST00000438378.2 transcribed_processed_pseudogene 131492813,131497210,131498867,131500204,131500506,131500962,131501181,131501358,131506312,131508537,131515602,131516314,131516857,131517727,131518503,131519050,131519535,131520097 131493140,131497293,131498953,131500346,131500581,131501070,131501233,131501508,131506442,131508608,131515747,131516404,131516957,131517890,131518708,131519283,131519666,131521573 Gene ID= ENSG00000152117.17 TPM= 23.54 Transcript Type= processed_transcript chr2 131527833 131533666 131527833 131533666 + ENST00000295171.10@CCDC74A ENST00000295171.10 protein_coding 131527833,131529647,131530579,131531664,131532589,131532864,131533013,131533269 131528220,131529691,131530827,131531802,131532781,131532937,131533069,131533666 Gene ID= ENSG00000163040.14 TPM= 32.84 Transcript Type= protein_coding chr2 131527865 131533669 131527865 131533669 + transcript3632.chr2.nic@CCDC74A transcript3632.chr2.nic protein_coding 131527865,131529647,131530777,131531664,131532710,131532864,131533013,131533269 131528220,131529691,131530827,131531802,131532781,131532937,131533069,131533669 Gene ID= ENSG00000163040.14 TPM= 6.39 Transcript Type= NA chr2 131527868 131533669 131527868 131533669 + transcript3640.chr2.nic@CCDC74A transcript3640.chr2.nic protein_coding 131527868,131529647,131530777,131531664,131532589,131532864,131533013,131533269 131528346,131529691,131530827,131531802,131532781,131532937,131533069,131533669 Gene ID= ENSG00000163040.14 TPM= 5.55 Transcript Type= NA chr2 131527865 131533669 131527865 131533669 + transcript3653.chr2.nic@CCDC74A transcript3653.chr2.nic protein_coding 131527865,131529647,131531664,131532589,131532864,131533013,131533269 131528220,131530827,131531802,131532781,131532937,131533069,131533669 Gene ID= ENSG00000163040.14 TPM= 3.87 Transcript Type= NA chr2 131527865 131533669 131527865 131533669 + transcript3661.chr2.nic@CCDC74A transcript3661.chr2.nic protein_coding 131527865,131529647,131532864,131533013,131533269 131528220,131532781,131532937,131533069,131533669 Gene ID= ENSG00000163040.14 TPM= 8.27 Transcript Type= NA chr2 131527880 131533666 131527880 131533666 + ENST00000409856.7@CCDC74A ENST00000409856.7 protein_coding 131527880,131529647,131530777,131531664,131532589,131532864,131533013,131533269 131528220,131529691,131530827,131531802,131532781,131532937,131533069,131533666 Gene ID= ENSG00000163040.14 TPM= 35.43 Transcript Type= protein_coding chr2 131682474 131767404 131682474 131767404 + transcript3666.chr2.nnic@C2orf27A transcript3666.chr2.nnic transcribed_unprocessed_pseudogene 131682474,131684709,131686064,131686330,131688166,131722417,131733833,131750633,131751509,131766619 131682557,131684819,131686211,131686441,131688303,131722648,131733952,131750830,131751585,131767404 Gene ID= ENSG00000197927.12 TPM= 1.81 Transcript Type= NA chr2 131682486 131722947 131682486 131722947 + transcript3669.chr2.nnic@C2orf27A transcript3669.chr2.nnic transcribed_unprocessed_pseudogene 131682486,131684709,131686064,131686330,131688166,131722417 131682988,131684819,131686211,131686441,131688303,131722947 Gene ID= ENSG00000197927.12 TPM= 1.81 Transcript Type= NA chr2 134455759 134719000 134455759 134719000 - ENST00000281924.6@TMEM163 ENST00000281924.6 protein_coding 134718734,134713200,134552048,134550570,134502901,134466114,134458032,134455759 134719000,134713319,134552091,134550661,134502997,134466225,134458173,134456776 Gene ID= ENSG00000152128.13 TPM= 13.58 Transcript Type= protein_coding chr2 134918822 134957404 134918822 134957404 + transcript3681.chr2.nic@CCNT2 transcript3681.chr2.nic protein_coding 134918822,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230,134954481 134919012,134919891,134936969,134939062,134942674,134946465,134947899,134952711,134954379,134957404 Gene ID= ENSG00000082258.12 TPM= 1.81 Transcript Type= NA chr2 134918825 134959342 134918825 134959342 + ENST00000264157.9@CCNT2 ENST00000264157.9 protein_coding 134918825,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230 134919012,134919891,134936969,134939062,134942674,134946146,134947899,134952711,134959342 Gene ID= ENSG00000082258.12 TPM= 8.15 Transcript Type= protein_coding chr2 134918822 134957406 134918822 134957406 + transcript3684.chr2.nic@CCNT2 transcript3684.chr2.nic protein_coding 134918822,134919810,134936841,134939002,134942612,134946101,134947736,134952641,134953230 134919012,134919891,134936969,134939062,134942674,134946465,134947899,134952711,134957406 Gene ID= ENSG00000082258.12 TPM= 2.72 Transcript Type= NA chr2 135052265 135170706 135052265 135170706 + ENST00000264158.12@RAB3GAP1 ENST00000264158.12 protein_coding 135052265,135052430,135058011,135090998,135093615,135113151,135115216,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135168545 135052325,135052485,135058086,135091130,135093693,135113270,135115381,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135170706 Gene ID= ENSG00000115839.17 TPM= 11.77 Transcript Type= protein_coding chr2 135052284 135170285 135052284 135170285 + transcript3689.chr2.nnic@RAB3GAP1 transcript3689.chr2.nnic protein_coding 135052284,135052430,135058011,135090998,135093615,135113151,135120819,135124165,135126181,135126583,135129995,135130552,135132895,135133861,135135265,135135564,135150369,135153649,135162555,135162748,135162986,135164594,135168545 135052325,135052485,135058086,135091130,135093693,135113270,135120918,135124246,135126249,135126656,135130087,135130721,135132984,135134033,135135319,135135932,135150506,135153876,135162651,135162851,135163101,135164696,135170285 Gene ID= ENSG00000115839.17 TPM= 2.72 Transcript Type= NA chr2 135199653 135531236 135199653 135531236 - ENST00000264159.10@ZRANB3 ENST00000264159.10 protein_coding 135531127,135504329,135390802,135353450,135349984,135345550,135315359,135313489,135275636,135271768,135268962,135265534,135230513,135227812,135224426,135219077,135217465,135208868,135207434,135202832,135199653 135531236,135504496,135390820,135353628,135350215,135345635,135315530,135313605,135275755,135271887,135269141,135265686,135230927,135228015,135224517,135219178,135217607,135208978,135207836,135202963,135200440 Gene ID= ENSG00000121988.17 TPM= 2.72 Transcript Type= protein_coding chr2 135531513 135725270 135531513 135725270 + ENST00000264160.8@R3HDM1 ENST00000264160.8 protein_coding 135531513,135602500,135604806,135616152,135616668,135621494,135622654,135631718,135631861,135635890,135636088,135638618,135638739,135638896,135641536,135645379,135651733,135661270,135675332,135680173,135709433,135710059,135715550,135721924,135722469,135723937 135531633,135602708,135605016,135616193,135616757,135621608,135622732,135631777,135632001,135635998,135636183,135638655,135638789,135639122,135641790,135645527,135652032,135661393,135675486,135680324,135709536,135710231,135715694,135722006,135722553,135725270 Gene ID= ENSG00000048991.16 TPM= 1.81 Transcript Type= protein_coding chr2 135531501 135725266 135531501 135725266 + ENST00000409478.5@R3HDM1 ENST00000409478.5 protein_coding 135531501,135602500,135604806,135621494,135622654,135631718,135631861,135635890,135636088,135638618,135638739,135638896,135645379,135651730,135661270,135675332,135680173,135709433,135710059,135715550,135721924,135722469,135723937 135531633,135602708,135605016,135621608,135622732,135631777,135632001,135635998,135636183,135638655,135638789,135639122,135645527,135652032,135661393,135675486,135680324,135709536,135710231,135715694,135722006,135722553,135725266 Gene ID= ENSG00000048991.16 TPM= 1.81 Transcript Type= protein_coding chr2 135741790 135785062 135741790 135785062 + transcript3703.chr2.nnic@UBXN4 transcript3703.chr2.nnic protein_coding 135741790,135748267,135753539,135754159,135755517,135761818,135769769,135770571,135772420,135776249,135778948,135780183,135782749,135783509 135742011,135748369,135753567,135754277,135755691,135761911,135769823,135770735,135772547,135776351,135779079,135780385,135782895,135785062 Gene ID= ENSG00000144224.16 TPM= 4.17 Transcript Type= NA chr2 135741619 135785055 135741619 135785055 + ENST00000272638.13@UBXN4 ENST00000272638.13 protein_coding 135741619,135748267,135753539,135754159,135755517,135761818,135769769,135770571,135772420,135776249,135778948,135780183,135782749 135742011,135748369,135753567,135754277,135755691,135761911,135769823,135770735,135772547,135776351,135779079,135780385,135785055 Gene ID= ENSG00000144224.16 TPM= 134.86 Transcript Type= protein_coding chr2 135839626 135876426 135839626 135876426 - ENST00000264156.2@MCM6 ENST00000264156.2 protein_coding 135876259,135872697,135870251,135868611,135866563,135866132,135865013,135862607,135859301,135857897,135856728,135852787,135851402,135848053,135846237,135844545,135839626 135876426,135872843,135870361,135868860,135866728,135866277,135865163,135862748,135859442,135858004,135856883,135852915,135851563,135848188,135846392,135844684,135840951 Gene ID= ENSG00000076003.4 TPM= 25.36 Transcript Type= protein_coding chr2 135906684 135985626 135906684 135985626 - transcript3719.chr2.nnic@DARS transcript3719.chr2.nnic protein_coding 135985403,135983397,135961396,135943378,135933910,135932783,135924387,135922784,135920453,135916226,135914469,135912486,135911382,135911139,135906684 135985626,135983454,135961498,135943480,135933990,135932842,135924498,135922918,135920600,135916372,135914511,135912566,135911493,135911210,135907407 Gene ID= ENSG00000115866.10 TPM= 4.98 Transcript Type= NA chr2 135906677 135985684 135906677 135985684 - ENST00000264161.8@DARS ENST00000264161.8 protein_coding 135985403,135983397,135979274,135961396,135943378,135933910,135932783,135924387,135922784,135920453,135916226,135914469,135912486,135911382,135911139,135906677 135985684,135983454,135979366,135961498,135943480,135933990,135932842,135924498,135922918,135920600,135916372,135914511,135912566,135911493,135911210,135907407 Gene ID= ENSG00000115866.10 TPM= 166.17 Transcript Type= protein_coding chr2 136114351 136118165 136114351 136118165 - ENST00000241393.3@CXCR4 ENST00000241393.3 protein_coding 136118046,136114351 136118165,136115912 Gene ID= ENSG00000121966.6 TPM= 127.68 Transcript Type= protein_coding chr2 137964473 137967444 137964473 137967444 + ENST00000280096.5@HNMT ENST00000280096.5 protein_coding 137964473,137967097 137964628,137967444 Gene ID= ENSG00000150540.13 TPM= 2.72 Transcript Type= protein_coding chr2 142877498 143055832 142877498 143055832 + ENST00000264170.8@KYNU ENST00000264170.8 protein_coding 142877498,142885349,142918609,142927659,142954810,142956203,142957641,142960624,142985084,142985948,143029627,143033236,143040428,143042047 142877736,142885536,142918729,142927741,142954871,142956274,142957715,142960770,142985182,142986021,143029679,143033321,143040658,143055832 Gene ID= ENSG00000115919.14 TPM= 9.06 Transcript Type= protein_coding chr2 142877666 142947421 142877666 142947421 + ENST00000410015.6@KYNU ENST00000410015.6 protein_coding 142877666,142885349,142918609,142927659,142947109 142877736,142885536,142918729,142927741,142947421 Gene ID= ENSG00000115919.14 TPM= 1.81 Transcript Type= protein_coding chr2 143435314 143768351 143435314 143768351 + transcript3742.chr2.nic@ARHGAP15 transcript3742.chr2.nic protein_coding 143435314,143436913,143487373,143519266,143556408,143624133,143703419,143767989 143435699,143437042,143487495,143519364,143556485,143624267,143703524,143768351 Gene ID= ENSG00000075884.13 TPM= 5.43 Transcript Type= NA chr2 143946010 144332263 143946010 144332263 - transcript3750.chr2.nnic@GTDC1 transcript3750.chr2.nnic protein_coding 144331494,144328529,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946010 144332263,144328663,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135 Gene ID= ENSG00000121964.14 TPM= 1.99 Transcript Type= NA chr2 143946010 144332596 143946010 144332596 - transcript3754.chr2.nic@GTDC1 transcript3754.chr2.nic protein_coding 144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946010 144332596,144235737,144211579,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135 Gene ID= ENSG00000121964.14 TPM= 7.43 Transcript Type= NA chr2 143946010 144145983 143946010 144145983 - transcript3760.chr2.nic@GTDC1 transcript3760.chr2.nic protein_coding 144145880,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946010 144145983,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135 Gene ID= ENSG00000121964.14 TPM= 6.52 Transcript Type= NA chr2 143946010 144332167 143946010 144332167 - transcript3762.chr2.nnic@GTDC1 transcript3762.chr2.nnic protein_coding 144331733,144235676,144211515,144208603,144145572,144141882,143970653,143951982,143946010 144332167,144235737,144211579,144208804,144145739,144142055,143970762,143952073,143947135 Gene ID= ENSG00000121964.14 TPM= 1.99 Transcript Type= NA chr2 143946016 144332534 143946016 144332534 - ENST00000542155.5@GTDC1 ENST00000542155.5 protein_coding 144332439,144235676,144211515,144208603,144145572,144141882,144007182,143970653,143957195,143952773,143951982,143946016 144332534,144235737,144211597,144208804,144145739,144142055,144007535,143970762,143957339,143952843,143952073,143947135 Gene ID= ENSG00000121964.14 TPM= 6.52 Transcript Type= protein_coding chr2 144384081 144520395 144384081 144520395 - ENST00000627532.2@ZEB2 ENST00000627532.2 protein_coding 144519939,144517278,144429769,144424796,144404836,144403916,144401199,144398301,144396412,144384081 144520395,144517419,144430026,144424867,144405024,144404130,144401307,144400270,144396592,144390028 Gene ID= ENSG00000169554.18 TPM= 20.83 Transcript Type= protein_coding chr2 144511389 144517755 144511389 144517755 - ENST00000470879.5@ZEB2 ENST00000470879.5 protein_coding 144517659,144517278,144511389 144517755,144517419,144513797 Gene ID= ENSG00000169554.18 TPM= 2.72 Transcript Type= protein_coding chr2 144426513 144520119 144426513 144520119 - ENST00000472146.5@ZEB2 ENST00000472146.5 protein_coding 144519939,144517278,144426513 144520119,144517419,144430026 Gene ID= ENSG00000169554.18 TPM= 2.72 Transcript Type= retained_intron chr2 147845028 147928118 147845028 147928118 + transcript3781.chr2.nnic@ACVR2A transcript3781.chr2.nnic protein_coding 147845028,147896364,147899456,147899742,147915191,147917283,147918447,147920230,147922973,147926031,147927080 147845207,147896508,147899567,147899898,147915334,147917426,147918592,147920344,147923111,147926161,147928118 Gene ID= ENSG00000121989.14 TPM= 1.81 Transcript Type= NA chr2 147935262 148020775 147935262 148020775 - transcript3783.chr2.nnic@ORC4 transcript3783.chr2.nnic protein_coding 148020633,147975902,147973448,147972739,147958791,147958298,147955347,147952373,147948051,147943436,147939140,147938298,147938146,147936940,147935262 148020775,147975975,147973524,147972829,147958866,147958383,147955395,147952524,147948224,147943522,147939248,147938393,147938213,147937015,147935698 Gene ID= ENSG00000115947.13 TPM= 1.81 Transcript Type= NA chr2 147933965 148020741 147933965 148020741 - transcript3785.chr2.nic@ORC4 transcript3785.chr2.nic protein_coding 148020608,147975902,147973448,147972739,147958791,147958298,147955347,147952373,147948051,147943436,147939140,147938298,147938146,147933965 148020741,147975975,147973524,147972829,147958866,147958383,147955395,147952524,147948224,147943522,147939248,147938393,147938213,147935698 Gene ID= ENSG00000115947.13 TPM= 4.53 Transcript Type= NA chr2 147930397 148021604 147930397 148021604 - ENST00000264169.6@ORC4 ENST00000264169.6 protein_coding 148021448,147975902,147973448,147972739,147958791,147958298,147955347,147952373,147948051,147943436,147939140,147938298,147938146,147930397 148021604,147975975,147973524,147972829,147958866,147958383,147955395,147952524,147948224,147943522,147939248,147938393,147938213,147935698 Gene ID= ENSG00000115947.13 TPM= 2.72 Transcript Type= protein_coding chr2 148643860 148788491 148643860 148788491 + transcript3790.chr2.nnic@EPC2 transcript3790.chr2.nnic protein_coding 148643860,148690214,148743622,148753927,148761782,148762670,148764955,148769151,148770792,148771044,148781644,148783597,148784668,148786305 148644147,148690373,148743767,148754133,148761930,148762802,148765146,148769240,148770937,148771387,148781780,148783756,148785001,148788491 Gene ID= ENSG00000135999.11 TPM= 5.43 Transcript Type= NA chr2 148644984 148787568 148644984 148787568 + ENST00000258484.10@EPC2 ENST00000258484.10 protein_coding 148644984,148690214,148743622,148753927,148761782,148762670,148764955,148769151,148770792,148771044,148781644,148783597,148784668,148786305 148645170,148690373,148743767,148754133,148761930,148762802,148765146,148769240,148770937,148771387,148781780,148783756,148785001,148787568 Gene ID= ENSG00000135999.11 TPM= 6.34 Transcript Type= protein_coding chr2 148875196 148998831 148875196 148998831 + transcript3797.chr2.nic@KIF5C transcript3797.chr2.nic protein_coding 148875196,148922137,148929281,148937284,148941610,148941935,148942673,148946899,148949839,148950314,148961971,148973336,148978922,148981355,148983620,148991010,148994421,148997264,148998400 148875743,148922227,148929354,148937388,148941658,148941990,148942760,148947023,148949943,148950462,148962119,148973511,148978990,148981561,148983766,148991198,148994538,148997340,148998831 Gene ID= ENSG00000168280.16 TPM= 2.72 Transcript Type= NA chr2 148875250 149026759 148875250 149026759 + ENST00000435030.5@KIF5C ENST00000435030.5 protein_coding 148875250,148922137,148929281,148937284,148941610,148941935,148942673,148946899,148949839,148950314,148961971,148973336,148978922,148981355,148983620,148991010,148994421,148997264,148998400,149000423,149000722,149005393,149007963,149010135,149011570,149023078 148875743,148922227,148929354,148937388,148941658,148941990,148942760,148947023,148949943,148950462,148962119,148973511,148978990,148981561,148983766,148991198,148994538,148997340,148998509,149000524,149000782,149005464,149008067,149010351,149011683,149026759 Gene ID= ENSG00000168280.16 TPM= 21.73 Transcript Type= protein_coding chr2 149569634 149587816 149569634 149587816 - ENST00000303319.9@MMADHC ENST00000303319.9 protein_coding 149587664,149587089,149582127,149579431,149576437,149575711,149571085,149569634 149587816,149587149,149582271,149579648,149576542,149575841,149571171,149570168 Gene ID= ENSG00000168288.12 TPM= 80.59 Transcript Type= protein_coding chr2 150468195 150487694 150468195 150487694 - ENST00000263895.8@RND3 ENST00000263895.8 protein_coding 150487549,150487268,150486694,150474875,150471627,150468195 150487694,150487455,150486781,150474984,150471761,150470238 Gene ID= ENSG00000115963.13 TPM= 46.93 Transcript Type= protein_coding chr2 150468195 150487667 150468195 150487667 - ENST00000375734.6@RND3 ENST00000375734.6 protein_coding 150487268,150486694,150474875,150471627,150468195 150487667,150486781,150474984,150471761,150470238 Gene ID= ENSG00000115963.13 TPM= 117.57 Transcript Type= protein_coding chr2 150468209 150485382 150468209 150485382 - ENST00000409557.5@RND3 ENST00000409557.5 protein_coding 150485286,150474875,150471627,150468209 150485382,150474984,150471761,150470238 Gene ID= ENSG00000115963.13 TPM= 7.54 Transcript Type= protein_coding chr2 151270465 151290057 151270465 151290057 - ENST00000243346.9@NMI ENST00000243346.9 protein_coding 151289593,151282868,151281948,151278828,151275758,151275484,151271626,151270465 151290057,151282954,151282043,151278990,151275864,151275670,151271732,151270875 Gene ID= ENSG00000123609.10 TPM= 37.13 Transcript Type= protein_coding chr2 151798802 151828488 151798802 151828488 - ENST00000295087.12@ARL5A ENST00000295087.12 protein_coding 151828131,151815139,151814169,151812357,151806821,151798802 151828488,151815199,151814316,151812440,151806972,151803324 Gene ID= ENSG00000162980.16 TPM= 141.27 Transcript Type= protein_coding chr2 152116801 152175992 152116801 152175992 - ENST00000263904.4@STAM2 ENST00000263904.4 protein_coding 152175603,152150145,152148225,152148024,152147162,152144888,152143827,152135509,152133402,152133173,152132114,152126226,152123766,152116801 152175992,152150229,152148300,152148122,152147308,152144957,152144013,152135603,152133484,152133260,152132168,152126379,152123935,152120802 Gene ID= ENSG00000115145.9 TPM= 14.49 Transcript Type= protein_coding chr2 152335101 152649831 152335101 152649831 + transcript3827.chr2.nnic@FMNL2 transcript3827.chr2.nnic protein_coding 152335101,152521943,152542739,152549021,152558740,152560883,152575136,152578888,152580956,152607339,152611495,152614851,152617091,152618846,152619509,152625438,152626525,152628299,152629656,152629825,152632008,152636427,152637573,152639958,152640791,152645434,152647796 152335720,152522026,152542819,152549097,152558823,152561035,152575244,152578964,152581049,152607413,152611605,152615000,152617192,152619158,152619718,152625562,152626727,152628533,152629724,152629905,152632137,152636590,152637674,152640056,152640914,152645480,152649831 Gene ID= ENSG00000157827.19 TPM= 2.72 Transcript Type= NA chr2 152655327 152718004 152655327 152718004 - transcript3833.chr2.nic@PRPF40A transcript3833.chr2.nic protein_coding 152717831,152717356,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152655327 152718004,152717625,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398 Gene ID= ENSG00000196504.15 TPM= 24 Transcript Type= NA chr2 152655323 152717460 152655323 152717460 - transcript3836.chr2.nic@PRPF40A transcript3836.chr2.nic protein_coding 152717230,152715995,152694542,152693038,152690962,152681226,152679352,152679056,152677451,152676405,152673598,152672978,152672459,152671273,152670231,152669137,152664138,152663876,152663655,152663035,152662603,152659270,152659093,152658948,152657889,152655323 152717460,152716126,152694622,152693068,152690978,152681336,152679472,152679109,152677475,152676779,152673706,152673042,152672623,152671381,152670381,152669270,152664252,152663967,152663771,152663172,152662698,152659356,152659189,152659009,152658020,152656398 Gene ID= ENSG00000196504.15 TPM= 4.98 Transcript Type= NA chr2 156324432 156332716 156324432 156332716 - ENST00000339562.8@NR4A2 ENST00000339562.8 protein_coding 156332480,156330668,156329323,156328404,156327851,156326718,156326150,156324432 156332716,156330791,156330188,156328533,156328014,156326920,156326328,156326000 Gene ID= ENSG00000153234.13 TPM= 62.48 Transcript Type= protein_coding chr2 156435441 156586403 156435441 156586403 + ENST00000310454.10@GPD2 ENST00000310454.10 protein_coding 156435441,156476098,156496044,156510796,156512220,156513333,156549608,156550602,156557389,156568825,156569363,156570087,156571134,156578889,156579086,156579690,156582793 156435804,156476207,156496215,156510920,156512317,156513496,156549772,156550746,156557582,156568959,156569538,156570218,156571292,156579001,156579164,156579788,156586403 Gene ID= ENSG00000115159.15 TPM= 2.72 Transcript Type= protein_coding chr2 157736429 157876373 157736429 157876373 - transcript3866.chr2.nic@ACVR1 transcript3866.chr2.nic protein_coding 157875796,157826528,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736429 157876373,157826646,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665 Gene ID= ENSG00000115170.13 TPM= 7.32 Transcript Type= NA chr2 157736249 157876114 157736249 157876114 - transcript3867.chr2.nnic@ACVR1 transcript3867.chr2.nnic protein_coding 157875796,157818269,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736249 157876114,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665 Gene ID= ENSG00000115170.13 TPM= 4.3 Transcript Type= NA chr2 157736449 157876102 157736449 157876102 - transcript3868.chr2.nnic@ACVR1 transcript3868.chr2.nnic protein_coding 157875742,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449 157876102,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665 Gene ID= ENSG00000115170.13 TPM= 6.41 Transcript Type= NA chr2 157736449 157875862 157736449 157875862 - ENST00000434821.5@ACVR1 ENST00000434821.5 protein_coding 157875796,157818385,157799427,157780337,157778131,157774088,157770368,157765921,157760880,157738440,157736449 157875862,157818559,157799500,157780600,157778342,157774187,157770514,157766196,157761077,157738570,157737665 Gene ID= ENSG00000115170.13 TPM= 8.22 Transcript Type= protein_coding chr2 158795317 158815993 158795317 158815993 + ENST00000309950.7@DAPL1 ENST00000309950.7 protein_coding 158795317,158804282,158807055,158815705 158795430,158804369,158807115,158815993 Gene ID= ENSG00000163331.11 TPM= 10.87 Transcript Type= protein_coding chr2 159235793 159286737 159235793 159286737 - transcript3883.chr2.nnic@WDSUB1 transcript3883.chr2.nnic protein_coding 159286583,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235793 159286737,159282873,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190 Gene ID= ENSG00000196151.10 TPM= 3.62 Transcript Type= NA chr2 159235793 159286799 159235793 159286799 - ENST00000359774.8@WDSUB1 ENST00000359774.8 protein_coding 159286583,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235793 159286799,159283093,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190 Gene ID= ENSG00000196151.10 TPM= 20.37 Transcript Type= protein_coding chr2 159235801 159286592 159235801 159286592 - ENST00000409990.7@WDSUB1 ENST00000409990.7 protein_coding 159286360,159282672,159279761,159275546,159271702,159259810,159257945,159257758,159256196,159248372,159235801 159286592,159283093,159279945,159275638,159271795,159259843,159257985,159257864,159256375,159248512,159236190 Gene ID= ENSG00000196151.10 TPM= 1.36 Transcript Type= protein_coding chr2 159615296 159617082 159615296 159617082 + ENST00000418474.1@AC009506.1 ENST00000418474.1 antisense_RNA 159615296,159615747 159615453,159617082 Gene ID= ENSG00000224152.1 TPM= 6.34 Transcript Type= antisense_RNA chr2 159712476 159768585 159712476 159768585 + transcript3904.chr2.nic@MARCH7 transcript3904.chr2.nic protein_coding 159712476,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159764626,159767284 159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159764674,159768585 Gene ID= ENSG00000136536.14 TPM= 69.95 Transcript Type= NA chr2 159712501 159768572 159712501 159768572 + transcript3908.chr2.nic@MARCH7 transcript3908.chr2.nic protein_coding 159712501,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159767284 159712606,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159768572 Gene ID= ENSG00000136536.14 TPM= 3.62 Transcript Type= NA chr2 159712476 159768842 159712476 159768842 + transcript3910.chr2.nic@MARCH7 transcript3910.chr2.nic protein_coding 159712476,159729009,159743061,159745770,159747805,159752402,159759226,159762880,159767284 159712661,159729175,159743253,159745937,159748903,159752571,159759335,159762993,159768842 Gene ID= ENSG00000136536.14 TPM= 7.24 Transcript Type= NA chr2 159768853 159798242 159768853 159798242 - ENST00000259053.5@CD302 ENST00000259053.5 protein_coding 159798132,159783359,159780882,159780005,159777938,159768853 159798242,159783469,159780998,159780178,159777964,159772053 Gene ID= ENSG00000241399.6 TPM= 14.49 Transcript Type= protein_coding chr2 159955391 160062636 159955391 160062636 - transcript3929.chr2.nic@PLA2R1 transcript3929.chr2.nic protein_coding 160062295,160044774,160042025,160032959,160028850,160028218,160022665,160020106,160016614,160013263,160005652,159987156,159983928,159979830,159977284,159976685,159976068,159970148,159969256,159967539,159956510,159955391 160062636,160045157,160042198,160033132,160028963,160028361,160022859,160020263,160016712,160013375,160005821,159987358,159984073,159979914,159977416,159976720,159976225,159970212,159969359,159967678,159956627,159955828 Gene ID= ENSG00000153246.12 TPM= 2.72 Transcript Type= NA chr2 160274301 160407902 160274301 160407902 - transcript3933.chr2.nic@RBMS1 transcript3933.chr2.nic protein_coding 160407464,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160282257,160281314,160278548,160277303,160275630,160274301 160407902,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160282304,160281364,160278658,160277383,160275714,160274764 Gene ID= ENSG00000153250.19 TPM= 5.61 Transcript Type= NA chr2 160274301 160493853 160274301 160493853 - transcript3935.chr2.nic@RBMS1 transcript3935.chr2.nic protein_coding 160493289,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160282257,160281314,160278548,160277303,160275630,160274301 160493853,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160282304,160281364,160278658,160277383,160275714,160274764 Gene ID= ENSG00000153250.19 TPM= 2.9 Transcript Type= NA chr2 160274004 160408043 160274004 160408043 - transcript3939.chr2.nic@RBMS1 transcript3939.chr2.nic protein_coding 160407464,160367216,160318169,160313156,160303330,160300651,160286969,160284995,160284775,160281314,160278548,160277303,160275630,160274004 160408043,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764 Gene ID= ENSG00000153250.19 TPM= 11.05 Transcript Type= NA chr2 160274301 160493837 160274301 160493837 - transcript3942.chr2.nic@RBMS1 transcript3942.chr2.nic protein_coding 160493289,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160281314,160278548,160277303,160275630,160274301 160493837,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764 Gene ID= ENSG00000153250.19 TPM= 3.8 Transcript Type= NA chr2 160274520 160407889 160274520 160407889 - ENST00000409972.5@RBMS1 ENST00000409972.5 protein_coding 160407464,160367216,160318169,160313156,160303330,160300651,160286978,160284995,160284775,160281314,160278548,160277303,160275630,160274520 160407889,160367391,160318227,160313247,160303487,160300730,160287084,160285044,160284868,160281364,160278658,160277383,160275714,160274764 Gene ID= ENSG00000153250.19 TPM= 14.49 Transcript Type= protein_coding chr2 161160297 161236172 161160297 161236172 + ENST00000392749.6@TANK ENST00000392749.6 protein_coding 161160297,161179614,161203487,161204675,161223915,161224631,161230971,161235342 161160486,161179761,161203595,161204793,161223991,161224746,161231551,161236172 Gene ID= ENSG00000136560.13 TPM= 45.73 Transcript Type= protein_coding chr2 161160712 161236176 161160712 161236176 + transcript3945.chr2.nic@TANK transcript3945.chr2.nic protein_coding 161160712,161179614,161203487,161204675,161223915,161224631,161230971,161235342 161160822,161179761,161203595,161204793,161223991,161224746,161231551,161236176 Gene ID= ENSG00000136560.13 TPM= 3.17 Transcript Type= NA chr2 161308038 161411717 161308038 161411717 + ENST00000409682.7@PSMD14 ENST00000409682.7 protein_coding 161308038,161316437,161318822,161367478,161367784,161370107,161371172,161385464,161391104,161395078,161408837,161411302 161308604,161316569,161318873,161367549,161367903,161370177,161371322,161385571,161391178,161395203,161408899,161411717 Gene ID= ENSG00000115233.11 TPM= 77.88 Transcript Type= protein_coding chr2 161992241 162074542 161992241 162074542 - ENST00000360534.7@DPP4 ENST00000360534.7 protein_coding 162073976,162073399,162047403,162046915,162045532,162039132,162038949,162038302,162035164,162033541,162024804,162022755,162020581,162020229,162019223,162018729,162017108,162016768,162014396,162011793,162009241,162008562,162005745,161995300,161994961,161992241 162074542,162073486,162047501,162047006,162045612,162039184,162039021,162038422,162035324,162033653,162024939,162022799,162020688,162020296,162019276,162018850,162017155,162016866,162014465,162011987,162009295,162008661,162005809,161995372,161995034,161993384 Gene ID= ENSG00000197635.9 TPM= 3.62 Transcript Type= protein_coding chr2 162267079 162318703 162267079 162318703 - ENST00000263642.2@IFIH1 ENST00000263642.2 protein_coding 162317855,162310765,162306709,162293564,162288135,162282366,162281328,162279996,162278205,162277415,162276687,162273795,162272226,162268087,162267479,162267079 162318703,162310933,162306855,162293668,162288355,162282576,162281545,162280112,162278328,162277693,162276946,162273944,162272387,162268277,162267569,162267379 Gene ID= ENSG00000115267.5 TPM= 16.3 Transcript Type= protein_coding chr2 162344088 162361420 162344088 162361420 + ENST00000437150.6@GCA ENST00000437150.6 protein_coding 162344088,162347578,162352338,162356438,162356758,162359044,162359494,162360217 162344275,162347742,162352407,162356481,162356905,162359157,162359552,162361420 Gene ID= ENSG00000115271.10 TPM= 42.56 Transcript Type= protein_coding chr2 164492814 164568593 164492814 164568593 - transcript3960.chr2.nic@GRB14 transcript3960.chr2.nic protein_coding 164568315,164547660,164527014,164525004,164521980,164508742,164508455,164502255,164497374,164497211,164497008,164494431,164492814 164568593,164547816,164527135,164525078,164522117,164508852,164508550,164502335,164497490,164497283,164497095,164494524,164493182 Gene ID= ENSG00000115290.9 TPM= 31.92 Transcript Type= NA chr2 164492814 164568593 164492814 164568593 - transcript3961.chr2.nnic@GRB14 transcript3961.chr2.nnic protein_coding 164568315,164547660,164527014,164525004,164521980,164508691,164508455,164502255,164497374,164497211,164497008,164494431,164492814 164568593,164547816,164527135,164525078,164522117,164508852,164508603,164502335,164497490,164497283,164497095,164494524,164493182 Gene ID= ENSG00000115290.9 TPM= 2.04 Transcript Type= NA chr2 164492814 164568530 164492814 164568530 - transcript3963.chr2.nic@GRB14 transcript3963.chr2.nic protein_coding 164568315,164547660,164527014,164525004,164521980,164508742,164508455,164502255,164497374,164497211,164497008,164494431,164492814 164568530,164547816,164527135,164525078,164522117,164508852,164508603,164502335,164497490,164497283,164497095,164494524,164493182 Gene ID= ENSG00000115290.9 TPM= 3.85 Transcript Type= NA chr2 164492814 164568530 164492814 164568530 - transcript3965.chr2.nic@GRB14 transcript3965.chr2.nic protein_coding 164568315,164547660,164527014,164525004,164521980,164508455,164502255,164497374,164497211,164497008,164494431,164492814 164568530,164547816,164527135,164525078,164522117,164508852,164502335,164497490,164497283,164497095,164494524,164493182 Gene ID= ENSG00000115290.9 TPM= 2.04 Transcript Type= NA chr2 164684727 164841864 164684727 164841864 - transcript3968.chr2.nic@COBLL1 transcript3968.chr2.nic protein_coding 164841156,164743687,164729914,164727969,164727106,164722425,164722075,164704952,164704444,164700522,164699405,164694269,164692221,164684727 164841864,164743875,164730115,164728197,164727144,164722522,164722311,164705105,164704518,164700756,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 4.28 Transcript Type= NA chr2 164684727 164841401 164684727 164841401 - transcript3970.chr2.nic@COBLL1 transcript3970.chr2.nic protein_coding 164841156,164779655,164743687,164729914,164727969,164722425,164722075,164704952,164704444,164700522,164699405,164694269,164692221,164684727 164841401,164779785,164743875,164730115,164728197,164722522,164722311,164705105,164704518,164700756,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 3.68 Transcript Type= NA chr2 164684727 164841823 164684727 164841823 - transcript3972.chr2.nic@COBLL1 transcript3972.chr2.nic protein_coding 164841710,164841156,164743687,164729914,164727969,164722425,164722075,164704952,164704444,164700522,164699405,164694269,164692221,164684727 164841823,164841246,164743875,164730115,164728197,164722522,164722311,164705105,164704518,164700756,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 11.83 Transcript Type= NA chr2 164684727 164840670 164684727 164840670 - transcript3975.chr2.nnic@COBLL1 transcript3975.chr2.nnic protein_coding 164840509,164743687,164729914,164727969,164722425,164722075,164704952,164704444,164700522,164699405,164694269,164692221,164684727 164840670,164743875,164730115,164728197,164722522,164722311,164705105,164704518,164700756,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 3.68 Transcript Type= NA chr2 164684727 164841823 164684727 164841823 - transcript3977.chr2.nnic@COBLL1 transcript3977.chr2.nnic protein_coding 164841710,164841156,164743687,164729914,164727969,164722425,164704952,164704444,164700522,164699405,164694269,164692221,164684727 164841823,164841246,164743875,164730115,164728197,164722522,164705105,164704518,164700756,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 3.45 Transcript Type= NA chr2 164684727 164841795 164684727 164841795 - transcript3978.chr2.nic@COBLL1 transcript3978.chr2.nic protein_coding 164841156,164743687,164704952,164704444,164700522,164699405,164694269,164692221,164684727 164841795,164743875,164705105,164704518,164700756,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 3.45 Transcript Type= NA chr2 164684727 164841823 164684727 164841823 - transcript3981.chr2.nnic@COBLL1 transcript3981.chr2.nnic protein_coding 164841710,164841156,164700522,164699405,164694269,164692221,164684727 164841823,164841246,164700687,164699499,164695836,164692397,164686032 Gene ID= ENSG00000082438.15 TPM= 3.15 Transcript Type= NA chr2 165747810 165794743 165747810 165794743 - transcript3984.chr2.nnic@GALNT3 transcript3984.chr2.nnic protein_coding 165794325,165770186,165764884,165761905,165759336,165758747,165757047,165754932,165754627,165749742,165747810 165794743,165770808,165765056,165762054,165759570,165758864,165757247,165755063,165754728,165749894,165748903 Gene ID= ENSG00000115339.13 TPM= 1.81 Transcript Type= NA chr2 165873362 165953843 165873362 165953843 - ENST00000243344.7@TTC21B ENST00000243344.7 protein_coding 165953685,165949595,165949394,165945524,165943219,165941027,165932973,165931758,165930172,165929650,165929135,165924549,165919276,165917257,165915201,165913574,165912514,165911327,165907678,165901722,165899770,165898686,165890838,165890479,165888279,165883794,165880679,165876165,165873362 165953843,165949724,165949504,165945690,165943341,165941184,165933057,165931856,165930364,165929747,165929335,165924678,165919433,165917481,165915439,165913646,165912624,165911465,165907784,165901910,165899880,165898767,165890988,165890640,165888474,165884018,165880799,165876232,165874832 Gene ID= ENSG00000123607.14 TPM= 9.96 Transcript Type= protein_coding chr2 166440591 166494248 166440591 166494248 - transcript3990.chr2.nic@SCN7A transcript3990.chr2.nic protein_coding 166493968,166477463,166474226,166473799,166472317,166470615,166465781,166465462,166462389,166456870,166447612,166444762,166443503,166440591 166494248,166477710,166474344,166473888,166472445,166470706,166465987,166465531,166462530,166457076,166447708,166445000,166443676,166441752 Gene ID= ENSG00000136546.13 TPM= 1.81 Transcript Type= NA chr2 167954020 168248141 167954020 168248141 - ENST00000355999.4@STK39 ENST00000355999.4 protein_coding 168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168065319,168063500,168017043,168012634,167964662,167954020 168248141,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168065381,168063570,168017095,168012702,167964726,167955570 Gene ID= ENSG00000198648.10 TPM= 4.53 Transcript Type= protein_coding chr2 167954021 168247665 167954021 168247665 - transcript3992.chr2.nnic@STK39 transcript3992.chr2.nnic protein_coding 168247228,168181978,168167299,168163739,168161787,168140649,168140289,168138088,168129710,168129541,168075109,168074982,168063500,168017043,168012634,167964662,167954021 168247665,168182090,168167407,168163880,168161842,168140758,168140390,168138221,168129758,168129606,168075231,168075011,168063570,168017095,168012702,167964726,167955570 Gene ID= ENSG00000198648.10 TPM= 1.81 Transcript Type= NA chr2 168455862 168775137 168455862 168775137 + ENST00000305747.10@CERS6 ENST00000305747.10 protein_coding 168455862,168547596,168561192,168630985,168691034,168694959,168715001,168717872,168765592,168769510 168456618,168547701,168561322,168631042,168691084,168695051,168715129,168717978,168765748,168775137 Gene ID= ENSG00000172292.14 TPM= 11.77 Transcript Type= protein_coding chr2 168802635 168865056 168802635 168865056 + transcript3997.chr2.nic@NOSTRIN transcript3997.chr2.nic protein_coding 168802635,168811567,168824634,168828158,168828420,168831472,168834227,168842992,168850836,168851084,168851279,168855352,168856690,168859512,168860795,168861960,168864834 168802673,168811652,168824717,168828220,168828501,168831534,168834325,168843117,168851006,168851182,168851404,168855460,168856778,168859637,168860909,168862049,168865056 Gene ID= ENSG00000163072.15 TPM= 1.81 Transcript Type= NA chr2 168802413 168865056 168802413 168865056 + transcript4000.chr2.nnic@NOSTRIN transcript4000.chr2.nnic protein_coding 168802413,168811567,168824634,168828158,168828420,168834227,168842992,168851084,168851279,168855352,168856690,168859512,168860795,168861960,168864834 168802673,168811652,168824717,168828220,168828501,168834325,168843117,168851182,168851404,168855460,168856778,168859637,168860909,168862049,168865056 Gene ID= ENSG00000163072.15 TPM= 1.81 Transcript Type= NA chr2 169479464 169506654 169479464 169506654 + transcript4004.chr2.nnic@BBS5 transcript4004.chr2.nnic protein_coding 169479464,169482251,169487069,169487806,169487987,169492874,169493741,169497627,169499486,169503095,169504303,169504481,169506001 169479612,169482333,169487134,169487855,169488114,169493009,169493836,169497689,169499620,169503178,169504326,169505951,169506654 Gene ID= ENSG00000163093.11 TPM= 9.21 Transcript Type= NA chr2 169479470 169506654 169479470 169506654 + transcript4007.chr2.nnic@BBS5 transcript4007.chr2.nnic protein_coding 169479470,169482251,169487069,169487806,169487987,169492874,169493741,169499486,169503095,169504303,169504481,169506001 169479612,169482333,169487134,169487855,169488114,169493009,169493836,169499620,169503178,169504326,169505951,169506654 Gene ID= ENSG00000163093.11 TPM= 6.49 Transcript Type= NA chr2 169479483 169506655 169479483 169506655 + ENST00000392663.6@BBS5 ENST00000392663.6 protein_coding 169479483,169482251,169487069,169487806,169487987,169492874,169493741,169499486,169503095,169504303,169504481 169479612,169482333,169487134,169487855,169488114,169493009,169493836,169499620,169503178,169504326,169506655 Gene ID= ENSG00000163093.11 TPM= 6.95 Transcript Type= protein_coding chr2 169529755 169573832 169529755 169573832 - ENST00000453929.6@FASTKD1 ENST00000453929.6 protein_coding 169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169537227,169531352,169530587,169529755 169573832,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169537340,169531490,169530701,169529926 Gene ID= ENSG00000138399.17 TPM= 1.81 Transcript Type= protein_coding chr2 169529749 169573873 169529749 169573873 - ENST00000453153.6@FASTKD1 ENST00000453153.6 protein_coding 169573669,169571653,169569184,169563225,169560387,169557187,169555124,169546218,169544721,169540051,169538013,169537227,169531352,169530587,169529749 169573873,169572171,169569252,169563350,169560785,169557297,169555255,169546704,169544835,169540179,169538141,169537340,169531490,169530701,169529926 Gene ID= ENSG00000138399.17 TPM= 3.62 Transcript Type= protein_coding chr2 169584340 169641406 169584340 169641406 + ENST00000260970.7@PPIG ENST00000260970.7 protein_coding 169584340,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413 169584490,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169641406 Gene ID= ENSG00000138398.15 TPM= 25.36 Transcript Type= protein_coding chr2 169584568 169641403 169584568 169641403 + transcript4017.chr2.nic@PPIG transcript4017.chr2.nic protein_coding 169584568,169603642,169604026,169604187,169606039,169607104,169608671,169614464,169614585,169630774,169631766,169633160,169636092,169636413 169584899,169603694,169604102,169604261,169606146,169607148,169608758,169614493,169614724,169630987,169631933,169633247,169636228,169641403 Gene ID= ENSG00000138398.15 TPM= 17.21 Transcript Type= NA chr2 169694465 169701708 169694465 169701708 + ENST00000359744.7@PHOSPHO2 ENST00000359744.7 protein_coding 169694465,169695215,169697361,169700946 169694622,169695247,169697531,169701708 Gene ID= ENSG00000144362.11 TPM= 2.72 Transcript Type= protein_coding chr2 169733846 169751888 169733846 169751888 + ENST00000392647.6@KLHL23 ENST00000392647.6 protein_coding 169733846,169735013,169741385,169749422 169734087,169736227,169741537,169751888 Gene ID= ENSG00000213160.9 TPM= 1.81 Transcript Type= protein_coding chr2 169798812 169812064 169798812 169812064 + ENST00000260956.8@SSB ENST00000260956.8 protein_coding 169798812,169800952,169805474,169805665,169806785,169806971,169808482,169808860,169810283,169810858,169811183,169811668 169798976,169801026,169805577,169805839,169806892,169807071,169808553,169808902,169810423,169811044,169811323,169812064 Gene ID= ENSG00000138385.15 TPM= 95.08 Transcript Type= protein_coding chr2 169811757 169824925 169811757 169824925 - ENST00000409965.5@METTL5 ENST00000409965.5 protein_coding 169824782,169824489,169821943,169821092,169819561,169815477,169812457,169811757 169824925,169824640,169822057,169821273,169819643,169815528,169812506,169811858 Gene ID= ENSG00000138382.14 TPM= 21.73 Transcript Type= protein_coding chr2 169811757 169824931 169811757 169824931 - ENST00000392640.6@METTL5 ENST00000392640.6 protein_coding 169824868,169824489,169821943,169821092,169819561,169815477,169812457,169811757 169824931,169824640,169822057,169821273,169819643,169815528,169812506,169811858 Gene ID= ENSG00000138382.14 TPM= 16.3 Transcript Type= protein_coding chr2 169811759 169824921 169811759 169824921 - transcript4037.chr2.nic@METTL5 transcript4037.chr2.nic protein_coding 169824489,169821943,169821092,169819561,169815477,169812457,169811759 169824921,169822057,169821273,169819643,169815528,169812524,169811858 Gene ID= ENSG00000138382.14 TPM= 1.81 Transcript Type= NA chr2 169811757 169824914 169811757 169824914 - ENST00000260953.9@METTL5 ENST00000260953.9 protein_coding 169824489,169821943,169821092,169819561,169815477,169812457,169811757 169824914,169822057,169821273,169819643,169815528,169812506,169811858 Gene ID= ENSG00000138382.14 TPM= 9.06 Transcript Type= protein_coding chr2 169827417 170084127 169827417 170084127 + transcript4042.chr2.nic@UBR3 transcript4042.chr2.nic protein_coding 169827417,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928727,169932912,169942493,169946288,169947542,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726 169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927405,169928868,169933008,169942634,169946392,169947715,169950065,169958526,169986794,169994456,170001414,170007202,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084127 Gene ID= ENSG00000144357.16 TPM= 12.68 Transcript Type= NA chr2 169827458 170084131 169827458 170084131 + ENST00000272793.9@UBR3 ENST00000272793.9 protein_coding 169827458,169872236,169875791,169877494,169878525,169891165,169895181,169896507,169905114,169906031,169914060,169923929,169924084,169925619,169926692,169926838,169927320,169928729,169932912,169942493,169946288,169947542,169949605,169958438,169986645,169994323,170001304,170006990,170008804,170015281,170029346,170040882,170055460,170061079,170061318,170073428,170079814,170080545,170081726 169828052,169872375,169875949,169877637,169878574,169891231,169895311,169896735,169905293,169906164,169914146,169923994,169924173,169925747,169926744,169926971,169927407,169928868,169933008,169942634,169946392,169947715,169950065,169958526,169986794,169994456,170001414,170007190,170008940,170015366,170029448,170040985,170055584,170061186,170061443,170073607,170080023,170080684,170084131 Gene ID= ENSG00000144357.16 TPM= 16.3 Transcript Type= protein_coding chr2 170771045 170778107 170771045 170778107 + transcript4051.chr2.nnic@AC007405.3 transcript4051.chr2.nnic lincRNA 170771045,170777377,170777644 170771427,170777425,170778107 Gene ID= ENSG00000239467.5 TPM= 1.81 Transcript Type= NA chr2 170816887 170861147 170816887 170861147 + transcript4054.chr2.nnic@GAD1 transcript4054.chr2.nnic protein_coding 170816887,170818529,170822087,170829475,170830950,170836793,170842569,170844045,170845506,170845706,170846009,170847676,170849286,170852714,170853873,170857018,170858804,170859709 170817048,170818673,170822149,170829633,170831192,170836883,170842654,170844157,170845621,170845785,170846063,170847792,170849350,170852792,170854022,170857125,170858893,170861147 Gene ID= ENSG00000128683.13 TPM= 4.53 Transcript Type= NA chr2 170816562 170861151 170816562 170861151 + ENST00000358196.7@GAD1 ENST00000358196.7 protein_coding 170816562,170818529,170822087,170829475,170830950,170836793,170844045,170845506,170845706,170846009,170847676,170849286,170852714,170853873,170857018,170858804,170859709 170817048,170818673,170822149,170829633,170831192,170836883,170844157,170845621,170845785,170846063,170847792,170849350,170852792,170854022,170857125,170858893,170861151 Gene ID= ENSG00000128683.13 TPM= 9.96 Transcript Type= protein_coding chr2 170816690 170842756 170816690 170842756 + ENST00000375272.5@GAD1 ENST00000375272.5 protein_coding 170816690,170818529,170822087,170829475,170830950,170836793,170842569 170817052,170818673,170822149,170829633,170831192,170836883,170842756 Gene ID= ENSG00000128683.13 TPM= 1.81 Transcript Type= protein_coding chr2 170928526 170967129 170928526 170967129 + ENST00000234160.4@GORASP2 ENST00000234160.4 protein_coding 170928526,170948350,170949539,170950204,170951328,170954650,170956436,170961663,170962839,170965790 170929403,170948430,170949742,170950290,170951458,170954782,170956559,170961749,170962946,170967129 Gene ID= ENSG00000115806.12 TPM= 174.47 Transcript Type= protein_coding chr2 170929460 170967131 170929460 170967131 + transcript4068.chr2.nic@GORASP2 transcript4068.chr2.nic protein_coding 170929460,170948350,170949539,170950204,170951328,170954650,170956436,170961663,170962839,170965790 170929941,170948430,170949742,170950290,170951458,170954782,170956559,170961749,170962946,170967131 Gene ID= ENSG00000115806.12 TPM= 6.95 Transcript Type= NA chr2 170992176 171161004 170992176 171161004 - transcript4071.chr2.nic@TLK1 transcript4071.chr2.nic protein_coding 171160290,171117739,171082781,171081640,171061081,171058151,171056471,171055083,171053761,171050064,171049814,171046174,171028339,171014851,171011373,171006972,171006800,171006474,171006147,170997712,170996653,170992176 171161004,171117857,171082852,171081708,171061156,171058197,171056566,171055172,171053853,171050174,171049950,171046362,171028405,171014948,171011454,171007063,171006889,171006643,171006282,170997823,170996760,170993956 Gene ID= ENSG00000198586.13 TPM= 6.34 Transcript Type= NA chr2 170990823 171160833 170990823 171160833 - ENST00000431350.6@TLK1 ENST00000431350.6 protein_coding 171160290,171117739,171082781,171061081,171058151,171056471,171055083,171053761,171050064,171049814,171046174,171028339,171014851,171011373,171006972,171006800,171006474,171006147,170997712,170996653,170990823 171160833,171117857,171082852,171061156,171058197,171056566,171055172,171053853,171050174,171049950,171046362,171028405,171014948,171011454,171007063,171006889,171006643,171006282,170997823,170996760,170993956 Gene ID= ENSG00000198586.13 TPM= 15.39 Transcript Type= protein_coding chr2 171522348 171558133 171522348 171558133 + ENST00000321348.8@CYBRD1 ENST00000321348.8 protein_coding 171522348,171541585,171553346,171554524 171522738,171541793,171553500,171558133 Gene ID= ENSG00000071967.11 TPM= 114.1 Transcript Type= protein_coding chr2 171687672 171748411 171687672 171748411 + ENST00000409197.5@DYNC1I2 ENST00000409197.5 protein_coding 171687672,171690147,171692777,171707287,171715328,171725618,171725919,171726194,171726791,171727821,171728305,171728717,171729709,171744049,171745802,171747776 171687873,171690263,171692894,171707377,171715443,171725713,171726081,171726293,171726916,171727967,171728418,171728850,171729853,171744189,171745927,171748411 Gene ID= ENSG00000077380.15 TPM= 92.37 Transcript Type= protein_coding chr2 171784371 171894511 171784371 171894511 - transcript4095.chr2.nic@SLC25A12 transcript4095.chr2.nic protein_coding 171894203,171893205,171868681,171855834,171848173,171844369,171837121,171834727,171833963,171826798,171815121,171813339,171810224,171809606,171793627,171791451,171787789,171787571,171784371 171894511,171893258,171868823,171855949,171848276,171844508,171837267,171834865,171834056,171826882,171815202,171813497,171810276,171809686,171793767,171791589,171787947,171787661,171785475 Gene ID= ENSG00000115840.13 TPM= 1.81 Transcript Type= NA chr2 171784370 171894252 171784370 171894252 - ENST00000422440.6@SLC25A12 ENST00000422440.6 protein_coding 171894203,171893205,171868681,171855834,171844369,171837121,171834727,171833963,171826798,171815121,171813339,171810224,171809606,171793627,171791451,171787789,171787571,171784370 171894252,171893258,171868823,171855949,171844508,171837267,171834865,171834056,171826882,171815202,171813497,171810276,171809686,171793767,171791589,171787947,171787661,171785475 Gene ID= ENSG00000115840.13 TPM= 10.87 Transcript Type= protein_coding chr2 171922465 171983682 171922465 171983682 + ENST00000264108.4@HAT1 ENST00000264108.4 protein_coding 171922465,171925537,171946708,171952881,171965338,171965787,171966409,171966843,171976157,171979247,171983185 171922507,171925641,171946783,171953001,171965517,171965908,171966513,171966949,171976308,171979363,171983682 Gene ID= ENSG00000128708.12 TPM= 41.66 Transcript Type= protein_coding chr2 171999943 172082427 171999943 172082427 + transcript4107.chr2.nnic@METAP1D transcript4107.chr2.nnic protein_coding 171999943,172061498,172063711,172065604,172066264,172070907,172077797,172079215,172080128,172080328 172000009,172061655,172063946,172065752,172066306,172071070,172077894,172079262,172080206,172082427 Gene ID= ENSG00000172878.13 TPM= 1.81 Transcript Type= NA chr2 171999943 172082427 171999943 172082427 + transcript4108.chr2.nic@METAP1D transcript4108.chr2.nic protein_coding 171999943,172061498,172063711,172065604,172066264,172070907,172077797,172079215,172080128 172000009,172061655,172063860,172065752,172066306,172071070,172077894,172079262,172082427 Gene ID= ENSG00000172878.13 TPM= 2.72 Transcript Type= NA chr2 172427555 172506230 172427555 172506230 + ENST00000264107.11@ITGA6 ENST00000264107.11 protein_coding 172427555,172465539,172467481,172469125,172470974,172474055,172474929,172475597,172476395,172479641,172479990,172484782,172485121,172487023,172487264,172487547,172487728,172487961,172488126,172489485,172491024,172491221,172491425,172497975,172501772,172504091 172427970,172465663,172467560,172469380,172471105,172474265,172475122,172475685,172476513,172479739,172480051,172484942,172485264,172487138,172487453,172487630,172487807,172488038,172488228,172489658,172491122,172491331,172491523,172498100,172501901,172506230 Gene ID= ENSG00000091409.14 TPM= 4.53 Transcript Type= protein_coding chr2 172556052 172598824 172556052 172598824 + transcript4119.chr2.nnic@PDK1 transcript4119.chr2.nnic protein_coding 172556052,172558708,172562220,172564503,172564978,172566856,172568741,172570726,172586278,172592935,172595829,172597132 172556346,172558849,172562291,172564687,172565073,172566933,172568817,172570824,172586388,172593048,172596023,172598824 Gene ID= ENSG00000152256.13 TPM= 3.62 Transcript Type= NA chr2 172556012 172598784 172556012 172598784 + transcript4126.chr2.nic@PDK1 transcript4126.chr2.nic protein_coding 172556012,172558708,172562220,172564503,172564978,172566856,172570726,172586278,172592935,172595829 172556346,172558849,172562291,172564687,172565073,172566933,172570824,172586388,172593048,172598784 Gene ID= ENSG00000152256.13 TPM= 1.81 Transcript Type= NA chr2 172927970 173052996 172927970 173052996 + transcript4154.chr2.nic@RAPGEF4 transcript4154.chr2.nic protein_coding 172927970,172960760,172961122,172965562,172967261,172983496,172985433,172988196,172988693,172990810,172996466,173001266,173014464,173016349,173017174,173017426,173018656,173020618,173026572,173027081,173030164,173033914,173036125,173036628,173048600,173051640 172928224,172960813,172961228,172965683,172967444,172983580,172985493,172988272,172988839,172990925,172996554,173001344,173014614,173016437,173017204,173017504,173018802,173020715,173026697,173027259,173030254,173033964,173036212,173036692,173048654,173052996 Gene ID= ENSG00000091428.17 TPM= 146.91 Transcript Type= NA chr2 172821575 173052893 172821575 173052893 + ENST00000397087.7@RAPGEF4 ENST00000397087.7 protein_coding 172821575,172917802,172922281,172960760,172961122,172965562,172967261,172983496,172985433,172988196,172988693,172990810,172996466,173001266,173014464,173016349,173017174,173017426,173018656,173020618,173026572,173027081,173030164,173033914,173036125,173036628,173048600,173051640 172821976,172917874,172922300,172960813,172961228,172965683,172967444,172983580,172985493,172988272,172988839,172990925,172996554,173001344,173014614,173016437,173017204,173017504,173018802,173020715,173026697,173027259,173030254,173033964,173036212,173036692,173048654,173052893 Gene ID= ENSG00000091428.17 TPM= 12.28 Transcript Type= protein_coding chr2 172860038 173052887 172860038 173052887 + ENST00000540783.5@RAPGEF4 ENST00000540783.5 protein_coding 172860038,172917802,172922281,172960760,172961122,172965562,172967261,172983496,172985433,172988196,172988693,172990810,172996466,173001266,173014464,173016349,173017174,173017426,173018656,173020618,173026572,173027081,173030164,173033914,173036125,173036628,173048600,173051640 172860299,172917874,172922300,172960813,172961228,172965683,172967444,172983580,172985493,172988272,172988839,172990925,172996554,173001344,173014614,173016437,173017204,173017504,173018802,173020715,173026697,173027259,173030254,173033964,173036212,173036692,173048654,173052887 Gene ID= ENSG00000091428.17 TPM= 153.42 Transcript Type= protein_coding chr2 173075870 173268920 173075870 173268920 + transcript4173.chr2.nic@MAP3K20 transcript4173.chr2.nic protein_coding 173075870,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173229689,173232192,173232320,173238373,173239404,173258699,173261063,173263745,173266050 173076002,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173229733,173232222,173232459,173238435,173239496,173258815,173261137,173263895,173268920 Gene ID= ENSG00000091436.16 TPM= 2.72 Transcript Type= NA chr2 173160011 173268920 173160011 173268920 + transcript4174.chr2.nic@MAP3K20 transcript4174.chr2.nic protein_coding 173160011,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173229689,173232192,173232320,173238373,173239404,173258699,173261063,173263745,173266050 173160407,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173229733,173232222,173232459,173238435,173239496,173258815,173261137,173263895,173268920 Gene ID= ENSG00000091436.16 TPM= 3.62 Transcript Type= NA chr2 173075842 173227146 173075842 173227146 + ENST00000338983.7@MAP3K20 ENST00000338983.7 protein_coding 173075842,173090998,173169805,173182854,173187558,173190895,173191040,173198026,173203796,173209729,173217115,173221150 173076002,173091190,173169892,173182955,173187623,173190923,173191177,173198112,173203870,173209835,173217250,173227146 Gene ID= ENSG00000091436.16 TPM= 9.06 Transcript Type= protein_coding chr2 173906460 173965818 173906460 173965818 - transcript4186.chr2.nic@SP3 transcript4186.chr2.nic protein_coding 173964405,173963761,173954873,173918593,173913070,173906460 173965818,173963883,173956232,173918785,173913266,173910257 Gene ID= ENSG00000172845.14 TPM= 20.83 Transcript Type= NA chr2 174072447 174248698 174072447 174248698 - ENST00000284719.7@OLA1 ENST00000284719.7 protein_coding 174248452,174246715,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174072447 174248698,174246815,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527 Gene ID= ENSG00000138430.15 TPM= 62.94 Transcript Type= protein_coding chr2 174075008 174248599 174075008 174248599 - ENST00000344357.9@OLA1 ENST00000344357.9 protein_coding 174248452,174229308,174223033,174141825,174123595,174123180,174081924,174081152,174078968,174075008 174248599,174229451,174223160,174142000,174123675,174123277,174082064,174081248,174079090,174075527 Gene ID= ENSG00000138430.15 TPM= 4.98 Transcript Type= protein_coding chr2 174348022 174395715 174348022 174395715 - ENST00000342016.7@CIR1 ENST00000342016.7 protein_coding 174395551,174387685,174381704,174380804,174380651,174380202,174378923,174351619,174350660,174348022 174395715,174387779,174381777,174380814,174380715,174380250,174379040,174351725,174350745,174349172 Gene ID= ENSG00000138433.15 TPM= 34.41 Transcript Type= protein_coding chr2 174395750 174428242 174395750 174428242 + transcript4201.chr2.nnic@SCRN3 transcript4201.chr2.nnic protein_coding 174395750,174398275,174399922,174400990,174404103,174422885,174424475,174427713 174396226,174398442,174400103,174401189,174404315,174423047,174424649,174428242 Gene ID= ENSG00000144306.14 TPM= 3.62 Transcript Type= NA chr2 174395742 174430074 174395742 174430074 + transcript4204.chr2.nic@SCRN3 transcript4204.chr2.nic protein_coding 174395742,174399922,174400990,174404103,174422885,174424475,174427713 174395817,174400103,174401189,174404315,174423047,174424649,174430074 Gene ID= ENSG00000144306.14 TPM= 1.81 Transcript Type= NA chr2 174434152 174487094 174434152 174487094 - ENST00000392551.6@GPR155 ENST00000392551.6 protein_coding 174486873,174482873,174481497,174472965,174470390,174468912,174466544,174465785,174461588,174461402,174459878,174453737,174446611,174445081,174442119,174439898,174434152 174487094,174482918,174481987,174473364,174470555,174469067,174466627,174465902,174461672,174461492,174460088,174453841,174446747,174445176,174442183,174440035,174436416 Gene ID= ENSG00000163328.13 TPM= 2.72 Transcript Type= protein_coding chr2 174559575 174597804 174559575 174597804 - transcript4218.chr2.nic@WIPF1 transcript4218.chr2.nic protein_coding 174597601,174585523,174581310,174575204,174571676,174567861,174567070,174559575 174597804,174585611,174581439,174575380,174572446,174568073,174567183,174562602 Gene ID= ENSG00000115935.17 TPM= 3.92 Transcript Type= NA chr2 174559575 174682849 174559575 174682849 - transcript4221.chr2.nnic@WIPF1 transcript4221.chr2.nnic protein_coding 174682774,174585523,174581310,174567861,174567070,174559575 174682849,174585611,174581439,174567937,174567183,174562602 Gene ID= ENSG00000115935.17 TPM= 1.81 Transcript Type= NA chr2 174559572 174634579 174559572 174634579 - ENST00000392547.6@WIPF1 ENST00000392547.6 protein_coding 174634518,174585523,174581310,174575204,174571676,174567861,174567070,174559572 174634579,174585611,174581439,174575380,174572446,174568073,174567183,174562602 Gene ID= ENSG00000115935.17 TPM= 6.64 Transcript Type= protein_coding chr2 174562204 174682883 174562204 174682883 - ENST00000359761.7@WIPF1 ENST00000359761.7 protein_coding 174682774,174585523,174581310,174575204,174571676,174567861,174567070,174562204 174682883,174585611,174581439,174575380,174572446,174568073,174567183,174562602 Gene ID= ENSG00000115935.17 TPM= 2.11 Transcript Type= protein_coding chr2 174799383 175005368 174799383 175005368 - transcript4224.chr2.nnic@CHN1 transcript4224.chr2.nnic protein_coding 175005206,175004894,174952164,174944888,174940816,174918534,174915058,174877840,174846880,174824434,174812309,174811511,174808905,174801707,174799383 175005368,175005080,174952202,174944943,174940894,174918565,174915171,174878128,174846957,174824518,174812482,174811588,174809042,174801812,174800287 Gene ID= ENSG00000128656.13 TPM= 3.02 Transcript Type= NA chr2 174799383 175005377 174799383 175005377 - transcript4225.chr2.nic@CHN1 transcript4225.chr2.nic protein_coding 175005206,175004894,174952164,174944888,174918534,174915058,174877840,174846880,174824434,174812309,174811511,174808905,174801707,174799383 175005377,175005080,174952202,174944943,174918565,174915171,174878128,174846957,174824518,174812482,174811588,174809042,174801812,174800287 Gene ID= ENSG00000128656.13 TPM= 10.26 Transcript Type= NA chr2 174799383 174847773 174799383 174847773 - transcript4230.chr2.nic@CHN1 transcript4230.chr2.nic protein_coding 174847719,174846880,174824434,174812309,174811511,174808905,174801707,174799383 174847773,174846957,174824518,174812482,174811588,174809042,174801812,174800287 Gene ID= ENSG00000128656.13 TPM= 2.11 Transcript Type= NA chr2 174799383 174847594 174799383 174847594 - transcript4233.chr2.nnic@CHN1 transcript4233.chr2.nnic protein_coding 174846880,174824434,174812309,174811511,174808905,174801707,174799383 174847594,174824518,174812482,174811588,174809042,174801833,174800287 Gene ID= ENSG00000128656.13 TPM= 1.81 Transcript Type= NA chr2 174799492 174847549 174799492 174847549 - ENST00000295497.11@CHN1 ENST00000295497.11 protein_coding 174846880,174824434,174812309,174811511,174808905,174801707,174799492 174847549,174824518,174812482,174811588,174809042,174801812,174800287 Gene ID= ENSG00000128656.13 TPM= 4.53 Transcript Type= protein_coding chr2 175072250 175168206 175072250 175168206 - ENST00000264110.6@ATF2 ENST00000264110.6 protein_coding 175168050,175151060,175136412,175130138,175121444,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250 175168206,175151158,175136486,175130207,175121540,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835 Gene ID= ENSG00000115966.16 TPM= 20.83 Transcript Type= protein_coding chr2 175072250 175168206 175072250 175168206 - ENST00000345739.9@ATF2 ENST00000345739.9 protein_coding 175168050,175151060,175136412,175130138,175118251,175117990,175114690,175113994,175111568,175097444,175093061,175080660,175072250 175168206,175151158,175136486,175130207,175118369,175118118,175114868,175114108,175111654,175097593,175093267,175080765,175074835 Gene ID= ENSG00000115966.16 TPM= 9.96 Transcript Type= protein_coding chr2 175176258 175184607 175176258 175184607 - ENST00000284727.8@ATP5G3 ENST00000284727.8 protein_coding 175181656,175181355,175180098,175179057,175176258 175184607,175181466,175180178,175179250,175178402 Gene ID= ENSG00000154518.9 TPM= 227.29 Transcript Type= protein_coding chr2 175178145 175181663 175178145 175181663 - ENST00000392541.3@ATP5G3 ENST00000392541.3 protein_coding 175181355,175180098,175179057,175178145 175181663,175180178,175179250,175178402 Gene ID= ENSG00000154518.9 TPM= 20.83 Transcript Type= protein_coding chr2 175178186 175181710 175178186 175181710 - ENST00000497075.5@ATP5G3 ENST00000497075.5 protein_coding 175181656,175181355,175180098,175178186 175181710,175181466,175180178,175179250 Gene ID= ENSG00000154518.9 TPM= 3.62 Transcript Type= retained_intron chr2 175923892 176002345 175923892 176002345 - ENST00000272748.8@LNPK ENST00000272748.8 protein_coding 176002160,175995558,175993182,175992231,175979810,175970764,175964506,175964372,175947480,175939552,175938313,175937344,175923892 176002345,175995646,175993223,175992418,175979868,175970804,175964589,175964423,175947692,175939657,175938383,175937514,175930199 Gene ID= ENSG00000144320.13 TPM= 35.32 Transcript Type= protein_coding chr2 176122720 176124937 176122720 176124937 + ENST00000249499.7@HOXD9 ENST00000249499.7 protein_coding 176122720,176123934 176123585,176124937 Gene ID= ENSG00000128709.12 TPM= 22.64 Transcript Type= protein_coding chr2 176131267 176136894 176131267 176136894 - transcript4256.chr2.nnic@HOXD-AS2 transcript4256.chr2.nnic antisense_RNA 176136621,176135319,176131267 176136894,176135422,176132610 Gene ID= ENSG00000237380.6 TPM= 2.26 Transcript Type= NA chr2 176134606 176137098 176134606 176137098 - ENST00000426965.1@HOXD-AS2 ENST00000426965.1 antisense_RNA 176136621,176135319,176134606 176137098,176135422,176134950 Gene ID= ENSG00000237380.6 TPM= 8.15 Transcript Type= antisense_RNA chr2 176129694 176132695 176129694 176132695 + ENST00000429017.2@HOXD8 ENST00000429017.2 protein_coding 176129694,176130796,176131317 176129774,176130943,176132695 Gene ID= ENSG00000175879.8 TPM= 3.17 Transcript Type= protein_coding chr2 176129740 176132029 176129740 176132029 + ENST00000313173.5@HOXD8 ENST00000313173.5 protein_coding 176129740,176131317 176130943,176132029 Gene ID= ENSG00000175879.8 TPM= 7.24 Transcript Type= protein_coding chr2 176136176 176140398 176136176 176140398 + transcript4258.chr2.nnic@HOXD3 transcript4258.chr2.nnic protein_coding 176136176,176136635,176138997 176136272,176136999,176140398 Gene ID= ENSG00000128652.11 TPM= 3.62 Transcript Type= NA chr2 176177717 176179008 176177717 176179008 + ENST00000426615.3@HAGLROS ENST00000426615.3 lincRNA 176177717,176178425 176178253,176179008 Gene ID= ENSG00000226363.3 TPM= 2.72 Transcript Type= lincRNA chr2 176269395 176338025 176269395 176338025 + ENST00000420864.5@MTX2 ENST00000420864.5 protein_coding 176269395,176270216,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493 176269669,176270419,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025 Gene ID= ENSG00000128654.13 TPM= 10.87 Transcript Type= nonsense_mediated_decay chr2 176269419 176338025 176269419 176338025 + ENST00000249442.10@MTX2 ENST00000249442.10 protein_coding 176269419,176296860,176297849,176323392,176326825,176328293,176328874,176329301,176330584,176337493 176269669,176296907,176297895,176323464,176326901,176328385,176328912,176329426,176330660,176338025 Gene ID= ENSG00000128654.13 TPM= 50.71 Transcript Type= protein_coding chr2 176629589 176637931 176629589 176637931 - ENST00000295549.8@LINC01116 ENST00000295549.8 lincRNA 176637462,176633033,176629589 176637931,176633125,176630432 Gene ID= ENSG00000163364.9 TPM= 12.68 Transcript Type= lincRNA chr2 177212741 177223958 177212741 177223958 + transcript4274.chr2.nnic@HNRNPA3 transcript4274.chr2.nnic protein_coding 177212741,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177222060 177212871,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223958 Gene ID= ENSG00000170144.20 TPM= 4.53 Transcript Type= NA chr2 177212749 177223958 177212749 177223958 + ENST00000411529.6@HNRNPA3 ENST00000411529.6 protein_coding 177212749,177215539,177215750,177215978,177216503,177216676,177216860,177217705,177219037,177219247,177219408 177212805,177215661,177215896,177216188,177216592,177216771,177216940,177217845,177219159,177219314,177223958 Gene ID= ENSG00000170144.20 TPM= 12.68 Transcript Type= protein_coding chr2 177212741 177216379 177212741 177216379 + transcript4279.chr2.nic@HNRNPA3 transcript4279.chr2.nic protein_coding 177212741,177215539,177215750,177215978 177212871,177215661,177215896,177216379 Gene ID= ENSG00000170144.20 TPM= 2.72 Transcript Type= NA chr2 177230305 177265131 177230305 177265131 - ENST00000397062.7@NFE2L2 ENST00000397062.7 protein_coding 177264532,177234005,177233250,177232392,177230305 177265131,177234271,177233339,177232583,177232008 Gene ID= ENSG00000116044.15 TPM= 113.65 Transcript Type= protein_coding chr2 177230305 177263800 177230305 177263800 - ENST00000397063.8@NFE2L2 ENST00000397063.8 protein_coding 177263403,177234005,177233250,177232392,177230305 177263800,177234271,177233339,177232583,177232008 Gene ID= ENSG00000116044.15 TPM= 40.3 Transcript Type= protein_coding chr2 177321513 177392689 177321513 177392689 - transcript4289.chr2.nnic@AC019080.1 transcript4289.chr2.nnic sense_overlapping 177392573,177338598,177334393,177323239,177321513 177392689,177338699,177334529,177323396,177322237 Gene ID= ENSG00000213963.6 TPM= 2.72 Transcript Type= NA chr2 177392644 177543836 177392644 177543836 + ENST00000264167.8@AGPS ENST00000264167.8 protein_coding 177392644,177420269,177434327,177436764,177436980,177440965,177442407,177445546,177461893,177468416,177482059,177493148,177497689,177499618,177505506,177507970,177513819,177521269,177523748,177538074 177393049,177420358,177434417,177436884,177437054,177441036,177442486,177445626,177462018,177468524,177482186,177493199,177497765,177499730,177505575,177508031,177513908,177521368,177523805,177543836 Gene ID= ENSG00000018510.13 TPM= 17.66 Transcript Type= protein_coding chr2 177393049 177540138 177393049 177540138 + transcript4293.chr2.nnic@AGPS transcript4293.chr2.nnic protein_coding 177393049,177420269,177434327,177436764,177436980,177440965,177442407,177445546,177461893,177468416,177482059,177493148,177497689,177499618,177505506,177507970,177513819,177521269,177523748,177538074 177393124,177420358,177434417,177436884,177437054,177441036,177442486,177445626,177462018,177468524,177482186,177493199,177497765,177499730,177505575,177508031,177513908,177521368,177523805,177540138 Gene ID= ENSG00000018510.13 TPM= 4.07 Transcript Type= NA chr2 178431414 178451231 178431414 178451231 - ENST00000325748.8@PRKRA ENST00000325748.8 protein_coding 178450966,178450242,178447505,178444422,178443267,178441610,178436145,178431414 178451231,178450411,178447586,178444500,178443384,178441704,178436319,178432254 Gene ID= ENSG00000180228.12 TPM= 52.52 Transcript Type= protein_coding chr2 178463664 178478558 178463664 178478558 - ENST00000424785.6@FKBP7 ENST00000424785.6 protein_coding 178478279,178477062,178469652,178463664 178478558,178477213,178469785,178465931 Gene ID= ENSG00000079150.17 TPM= 4.53 Transcript Type= protein_coding chr2 178480461 178505062 178480461 178505062 + transcript4309.chr2.nic@PLEKHA3 transcript4309.chr2.nic protein_coding 178480461,178485641,178488968,178490659,178493853,178495496,178499211,178501061,178503760 178480909,178485757,178489014,178490814,178493989,178495660,178499254,178501176,178505062 Gene ID= ENSG00000116095.10 TPM= 9.06 Transcript Type= NA chr2 179108808 179264784 179108808 179264784 - transcript4327.chr2.nnic@SESTD1 transcript4327.chr2.nnic protein_coding 179264499,179191787,179183080,179176448,179172120,179151278,179149297,179146402,179143592,179132304,179124364,179123715,179121770,179117532,179115065,179112724,179108808 179264784,179191866,179183188,179176538,179172233,179151391,179149394,179146457,179143803,179132426,179124558,179123829,179121929,179117613,179115256,179112845,179110028 Gene ID= ENSG00000187231.13 TPM= 1.81 Transcript Type= NA chr2 179441993 179544972 179441993 179544972 - transcript4330.chr2.nic@ZNF385B transcript4330.chr2.nic protein_coding 179544827,179518528,179483272,179446525,179445550,179444876,179441993 179544972,179518638,179483434,179446770,179445728,179444977,179443468 Gene ID= ENSG00000144331.18 TPM= 7.24 Transcript Type= NA chr2 180980347 181063439 180980347 181063439 + transcript4334.chr2.nnic@UBE2E3 transcript4334.chr2.nnic protein_coding 180980347,180981413,180982018,180984043,181057693,181060665,181062791 180980973,180981477,180982236,180984093,181057825,181060812,181063439 Gene ID= ENSG00000170035.15 TPM= 2.49 Transcript Type= NA chr2 180980360 181063439 180980360 181063439 + transcript4335.chr2.nic@UBE2E3 transcript4335.chr2.nic protein_coding 180980360,180980942,180982018,180984043,181057693,181060665,181062791 180980546,180980973,180982236,180984093,181057825,181060812,181063439 Gene ID= ENSG00000170035.15 TPM= 3.4 Transcript Type= NA chr2 180981124 181063441 180981124 181063441 + ENST00000602710.5@UBE2E3 ENST00000602710.5 protein_coding 180981124,180982018,180984043,181057693,181060665,181062791 180981477,180982236,180984093,181057825,181060812,181063441 Gene ID= ENSG00000170035.15 TPM= 1.58 Transcript Type= protein_coding chr2 180980606 181063441 180980606 181063441 + ENST00000410062.8@UBE2E3 ENST00000410062.8 protein_coding 180980606,180982018,180984043,181057693,181060665,181062791 180980973,180982236,180984093,181057825,181060812,181063441 Gene ID= ENSG00000170035.15 TPM= 39.62 Transcript Type= protein_coding chr2 181457225 181536187 181457225 181536187 + ENST00000397033.6@ITGA4 ENST00000397033.6 protein_coding 181457225,181458196,181474960,181475159,181478757,181480137,181481598,181482360,181482514,181485881,181493325,181494722,181495371,181495783,181498623,181509658,181511699,181522191,181523437,181524171,181525202,181527297,181529541,181530524,181531657,181534272,181534816,181535432 181457851,181458317,181475066,181475288,181478824,181480266,181481683,181482422,181482651,181485992,181493419,181494812,181495416,181495937,181498777,181509807,181511775,181522341,181523532,181524250,181525291,181527387,181529648,181530649,181531776,181534370,181534935,181536187 Gene ID= ENSG00000115232.13 TPM= 1.81 Transcript Type= protein_coding chr2 181891964 181930736 181891964 181930736 + transcript4341.chr2.nic@SSFA2 transcript4341.chr2.nic protein_coding 181891964,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181928161,181929561 181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920650,181922412,181928278,181930736 Gene ID= ENSG00000138434.16 TPM= 3.62 Transcript Type= NA chr2 181891828 181930736 181891828 181930736 + transcript4348.chr2.nic@SSFA2 transcript4348.chr2.nic protein_coding 181891828,181892615,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181928161,181929561 181892277,181892660,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920662,181922412,181928278,181930736 Gene ID= ENSG00000138434.16 TPM= 2.72 Transcript Type= NA chr2 181891888 181930738 181891888 181930738 + ENST00000431877.6@SSFA2 ENST00000431877.6 protein_coding 181891888,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181928161,181929561 181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920662,181922412,181928278,181930738 Gene ID= ENSG00000138434.16 TPM= 20.83 Transcript Type= protein_coding chr2 181891955 181930738 181891955 181930738 + ENST00000320370.11@SSFA2 ENST00000320370.11 protein_coding 181891955,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181920597,181921948,181929561 181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181920662,181922412,181930738 Gene ID= ENSG00000138434.16 TPM= 1.81 Transcript Type= protein_coding chr2 181891985 181930738 181891985 181930738 + ENST00000409001.5@SSFA2 ENST00000409001.5 protein_coding 181891985,181892615,181896030,181896908,181898880,181899014,181900696,181901766,181909899,181913845,181915216,181918598,181918755,181919296,181921948,181928161,181929561 181892277,181892660,181896079,181896964,181898919,181899112,181900904,181902466,181909971,181913933,181916427,181918675,181918882,181919446,181922412,181928278,181930738 Gene ID= ENSG00000138434.16 TPM= 1.81 Transcript Type= protein_coding chr2 182140046 182427062 182140046 182427062 - transcript4351.chr2.nic@PDE1A transcript4351.chr2.nic protein_coding 182426578,182264301,182240110,182234432,182231015,182230006,182223864,182205940,182201688,182201439,182188979,182186468,182185892,182147036,182140046 182427062,182264414,182240292,182234498,182231131,182230146,182223964,182206065,182201789,182201559,182189060,182186588,182186079,182147152,182143038 Gene ID= ENSG00000115252.18 TPM= 3.62 Transcript Type= NA chr2 182167887 182427048 182167887 182427048 - ENST00000351439.9@PDE1A ENST00000351439.9 protein_coding 182426578,182264301,182240110,182234432,182231015,182230006,182223864,182205940,182201688,182201439,182188979,182186468,182185892,182167887 182427048,182264414,182240292,182234498,182231131,182230146,182223964,182206065,182201789,182201559,182189060,182186588,182186079,182168290 Gene ID= ENSG00000115252.18 TPM= 2.72 Transcript Type= protein_coding chr2 182715998 182778507 182715998 182778507 + transcript4353.chr2.nic@DNAJC10 transcript4353.chr2.nic protein_coding 182715998,182717016,182717941,182720007,182722025,182728576,182728863,182729848,182731030,182732499,182736249,182739545,182741243,182743598,182751658,182752072,182755003,182756314,182757692,182758837,182759160,182762682,182775316,182777121 182716483,182717072,182718290,182720169,182722075,182728658,182728994,182729941,182731107,182732542,182736386,182740388,182741356,182743712,182751785,182752188,182755104,182756469,182757825,182758890,182759307,182762801,182775420,182778507 Gene ID= ENSG00000077232.17 TPM= 3.62 Transcript Type= NA chr2 182833275 182867162 182833275 182867162 - ENST00000295113.4@FRZB ENST00000295113.4 protein_coding 182866075,182858786,182842478,182838409,182837948,182833275 182867162,182858833,182842543,182838613,182838011,182834965 Gene ID= ENSG00000162998.4 TPM= 8.15 Transcript Type= protein_coding chr2 183124355 183161680 183124355 183161680 + ENST00000295119.8@NUP35 ENST00000295119.8 protein_coding 183124355,183128287,183130418,183133566,183151508,183157444,183158283,183159488,183161054 183124497,183128457,183130545,183133623,183151649,183157513,183158411,183159652,183161680 Gene ID= ENSG00000163002.12 TPM= 14.49 Transcript Type= protein_coding chr2 186486212 186509359 186486212 186509359 + transcript4375.chr2.nic@ZC3H15 transcript4375.chr2.nic protein_coding 186486212,186495233,186500182,186501273,186502496,186504032,186505451,186505740,186506713,186508543 186486457,186495334,186500293,186501425,186502552,186504214,186505597,186505841,186506836,186509359 Gene ID= ENSG00000065548.17 TPM= 2.72 Transcript Type= NA chr2 186486212 186509357 186486212 186509357 + transcript4378.chr2.nic@ZC3H15 transcript4378.chr2.nic protein_coding 186486212,186495233,186500182,186501273,186502496,186504032,186505740,186506713,186508543 186486457,186495334,186500293,186501425,186502587,186505597,186505841,186506836,186509357 Gene ID= ENSG00000065548.17 TPM= 5.43 Transcript Type= NA chr2 186590065 186680901 186590065 186680901 + ENST00000261023.7@ITGAV ENST00000261023.7 protein_coding 186590065,186602021,186622339,186625473,186630797,186633329,186636082,186637065,186638277,186638409,186640915,186641386,186646686,186649840,186651982,186654650,186656247,186659038,186663768,186664494,186665126,186666704,186667150,186667671,186668762,186669701,186675604,186675820,186676813,186677197 186590523,186602151,186622430,186625587,186630858,186633374,186636207,186637109,186638320,186638465,186640967,186641588,186646877,186649885,186652089,186654708,186656401,186659175,186663835,186664641,186665218,186666783,186667230,186667776,186668920,186669814,186675717,186675927,186676935,186680901 Gene ID= ENSG00000138448.11 TPM= 65.2 Transcript Type= protein_coding chr2 187343129 187448460 187343129 187448460 - ENST00000409998.5@CALCRL ENST00000409998.5 protein_coding 187448039,187431297,187387666,187387329,187385545,187383173,187380677,187380467,187378940,187363376,187360598,187359212,187359063,187352114,187351920,187343129 187448460,187431364,187387756,187387493,187385631,187383305,187380787,187380579,187379031,187363502,187360751,187359272,187359129,187352332,187351961,187346399 Gene ID= ENSG00000064989.12 TPM= 6.79 Transcript Type= protein_coding chr2 187343129 187448460 187343129 187448460 - ENST00000392370.7@CALCRL ENST00000392370.7 protein_coding 187448039,187387666,187387329,187385545,187383173,187380677,187380467,187378940,187363376,187360598,187359212,187359063,187352114,187351920,187343129 187448460,187387756,187387493,187385631,187383305,187380787,187380579,187379031,187363502,187360751,187359272,187359129,187352332,187351961,187346399 Gene ID= ENSG00000064989.12 TPM= 5.89 Transcript Type= protein_coding chr2 187461965 187557894 187461965 187557894 + transcript4401.chr2.nnic@AC007319.1 transcript4401.chr2.nnic antisense_RNA 187461965,187499506,187547078,187547483,187554317,187555935 187462016,187499605,187547163,187547707,187554393,187557894 Gene ID= ENSG00000224063.5 TPM= 3.17 Transcript Type= NA chr2 187461554 187557966 187461554 187557966 + transcript4402.chr2.nnic@AC007319.1 transcript4402.chr2.nnic antisense_RNA 187461554,187499506,187547078,187547544,187554276,187555935 187462016,187499605,187547163,187547707,187554393,187557966 Gene ID= ENSG00000224063.5 TPM= 3.62 Transcript Type= NA chr2 187461469 187557894 187461469 187557894 + transcript4403.chr2.nnic@AC007319.1 transcript4403.chr2.nnic antisense_RNA 187461469,187499506,187547078,187547544,187554317,187555935 187462016,187499605,187547163,187547707,187554393,187557894 Gene ID= ENSG00000224063.5 TPM= 3.17 Transcript Type= NA chr2 187461605 187557894 187461605 187557894 + transcript4404.chr2.nnic@AC007319.1 transcript4404.chr2.nnic antisense_RNA 187461605,187499506,187547078,187547581,187554276,187555935 187462016,187499605,187547163,187547707,187554393,187557894 Gene ID= ENSG00000224063.5 TPM= 1.81 Transcript Type= NA chr2 187464233 187554505 187464233 187554505 - transcript4392.chr2.nic@TFPI transcript4392.chr2.nic protein_coding 187554200,187529364,187503648,187496881,187488337,187484811,187484124,187467753,187464233 187554505,187529485,187503770,187497078,187488375,187484987,187484216,187467932,187467042 Gene ID= ENSG00000003436.15 TPM= 8.45 Transcript Type= NA chr2 187478581 187554449 187478581 187554449 - transcript4396.chr2.nic@TFPI transcript4396.chr2.nic protein_coding 187554200,187529364,187503648,187496881,187488337,187484811,187484124,187478581 187554449,187529485,187503770,187497078,187488375,187484987,187484216,187478803 Gene ID= ENSG00000003436.15 TPM= 2.72 Transcript Type= NA chr2 187464230 187513641 187464230 187513641 - ENST00000392365.5@TFPI ENST00000392365.5 protein_coding 187513616,187503648,187496881,187488337,187484811,187484124,187467753,187464230 187513641,187503770,187497078,187488375,187484987,187484216,187467932,187467042 Gene ID= ENSG00000003436.15 TPM= 4.83 Transcript Type= protein_coding chr2 187464261 187554492 187464261 187554492 - ENST00000233156.8@TFPI ENST00000233156.8 protein_coding 187554200,187503648,187496881,187488337,187484811,187484124,187467753,187464261 187554492,187503770,187497078,187488375,187484987,187484216,187467932,187467042 Gene ID= ENSG00000003436.15 TPM= 26.56 Transcript Type= protein_coding chr2 188291537 188595949 188291537 188595949 + transcript4413.chr2.nic@GULP1 transcript4413.chr2.nic protein_coding 188291537,188383763,188466475,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940 188292219,188383889,188466568,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595949 Gene ID= ENSG00000144366.15 TPM= 5.46 Transcript Type= NA chr2 188291598 188595949 188291598 188595949 + transcript4414.chr2.nic@GULP1 transcript4414.chr2.nic protein_coding 188291598,188383763,188466475,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940 188292166,188383889,188466568,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595949 Gene ID= ENSG00000144366.15 TPM= 9.08 Transcript Type= NA chr2 188292774 188595949 188292774 188595949 + transcript4420.chr2.nic@GULP1 transcript4420.chr2.nic protein_coding 188292774,188383763,188466475,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940 188293112,188383889,188466568,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595949 Gene ID= ENSG00000144366.15 TPM= 5.46 Transcript Type= NA chr2 188291857 188595949 188291857 188595949 + transcript4424.chr2.nic@GULP1 transcript4424.chr2.nic protein_coding 188291857,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940 188292219,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595949 Gene ID= ENSG00000144366.15 TPM= 3.47 Transcript Type= NA chr2 188291930 188595949 188291930 188595949 + transcript4434.chr2.nic@GULP1 transcript4434.chr2.nic protein_coding 188291930,188383763,188477659,188483431,188522756,188529097,188569239,188570028,188584265,188587855,188593940 188292166,188383889,188477730,188483492,188522827,188529195,188569355,188570120,188584403,188587949,188595949 Gene ID= ENSG00000144366.15 TPM= 2.72 Transcript Type= NA chr2 188291669 188595059 188291669 188595059 + ENST00000409843.5@GULP1 ENST00000409843.5 protein_coding 188291669,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188589740,188593940 188292166,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188589750,188595059 Gene ID= ENSG00000144366.15 TPM= 2.72 Transcript Type= protein_coding chr2 188292772 188595931 188292772 188595931 + ENST00000359135.7@GULP1 ENST00000359135.7 protein_coding 188292772,188383763,188477659,188483431,188522756,188529097,188541181,188569239,188570028,188584265,188587855,188593940 188293112,188383889,188477730,188483492,188522827,188529195,188541318,188569355,188570120,188584403,188587949,188595931 Gene ID= ENSG00000144366.15 TPM= 18.86 Transcript Type= protein_coding chr2 188974320 189012746 188974320 189012746 + ENST00000304636.7@COL3A1 ENST00000304636.7 protein_coding 188974320,188984760,188985197,188985665,188987059,188988081,188988590,188989396,188990096,188990307,188991004,188991487,188991669,188992184,188992887,188993361,188994038,188994234,188994541,188994724,188995046,188995692,188996125,188996398,188997165,188997336,188997700,188998266,188998674,188999285,188999470,188999842,189001397,189001536,189002298,189002955,189003411,189003734,189003982,189004257,189005350,189006206,189006345,189006937,189007500,189007885,189008035,189008924,189010178,189010648,189011628 188974568,188984962,188985247,188985778,188987139,188988134,188988643,188989449,188990149,188990360,188991057,188991531,188991722,188992228,188992940,188993459,188994082,188994332,188994594,188994831,188995099,188995790,188996178,188996496,188997218,188997389,188997753,188998319,188998718,188999383,188999577,188999895,189001450,189001589,189002351,189003062,189003464,189003787,189004143,189004364,189005457,189006259,189006452,189006990,189007607,189007938,189008142,189009221,189010365,189010890,189012746 Gene ID= ENSG00000168542.14 TPM= 490.96 Transcript Type= protein_coding chr2 189032515 189441123 189032515 189441123 - transcript4469.chr2.nnic@COL5A2 transcript4469.chr2.nnic protein_coding 189441023,189348142,189346225,189225148,189110225,189104264,189100107,189098727,189097277,189092310,189088695,189086726,189085719,189085160,189083984,189080990,189079978,189079063,189078516,189075393,189072040,189068786,189068226,189068015,189066729,189066390,189065004,189064557,189063980,189063172,189063010,189062865,189061562,189060730,189058849,189058429,189057320,189056973,189054159,189053895,189053424,189052911,189052749,189052172,189051320,189050569,189049347,189048209,189045800,189045179,189043151,189042720,189041586,189039272,189036616,189034916,189032515 189441123,189348196,189346294,189225332,189110449,189104277,189100139,189098759,189097330,189092420,189088772,189086770,189085772,189085213,189084037,189081043,189080031,189079107,189078569,189075437,189072093,189068884,189068270,189068113,189066782,189066497,189065057,189064655,189064033,189063270,189063063,189062918,189061615,189060783,189058893,189058527,189057427,189057026,189054212,189053948,189053477,189053018,189052802,189052225,189051481,189050676,189049454,189048262,189045907,189045232,189043258,189042773,189041693,189039563,189036803,189035155,189034216 Gene ID= ENSG00000204262.11 TPM= 6.79 Transcript Type= NA chr2 189031896 189179879 189031896 189179879 - ENST00000374866.7@COL5A2 ENST00000374866.7 protein_coding 189179508,189110225,189104264,189100107,189098727,189097277,189092310,189088695,189086726,189085719,189085160,189083984,189080990,189079978,189079063,189078516,189075393,189072040,189068786,189068226,189068015,189066729,189066390,189065004,189064557,189063980,189063172,189063010,189062865,189061562,189060730,189058849,189058429,189057320,189056973,189054159,189053895,189053424,189052911,189052749,189052172,189051320,189050569,189049347,189048209,189045800,189045179,189043151,189042720,189041586,189039272,189036616,189034916,189031896 189179879,189110449,189104277,189100139,189098759,189097330,189092420,189088772,189086770,189085772,189085213,189084037,189081043,189080031,189079107,189078569,189075437,189072093,189068884,189068270,189068113,189066782,189066497,189065057,189064655,189064033,189063270,189063063,189062918,189061615,189060783,189058893,189058527,189057427,189057026,189054212,189053948,189053477,189053018,189052802,189052225,189051481,189050676,189049454,189048262,189045907,189045232,189043258,189042773,189041693,189039563,189036803,189035155,189034216 Gene ID= ENSG00000204262.11 TPM= 10.41 Transcript Type= protein_coding chr2 189441433 189475565 189441433 189475565 + ENST00000314761.8@WDR75 ENST00000314761.8 protein_coding 189441433,189448379,189450903,189451805,189455320,189457311,189458753,189459336,189462484,189463694,189463846,189465079,189466425,189467468,189468475,189469344,189470076,189470819,189474186,189474717,189475213 189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189463753,189463961,189465254,189466582,189467648,189468569,189469439,189470245,189470878,189474332,189474808,189475565 Gene ID= ENSG00000115368.9 TPM= 43.92 Transcript Type= protein_coding chr2 189441482 189475552 189441482 189475552 + ENST00000427960.5@WDR75 ENST00000427960.5 protein_coding 189441482,189448379,189449245,189451805,189455320,189457311,189458753,189459336,189462484,189463694,189463846,189465079,189466425,189467468,189468475,189469344,189470076,189470819,189474186,189474717,189475213 189441578,189448508,189450968,189451895,189455444,189457381,189458872,189459424,189462642,189463753,189463961,189465254,189466582,189467648,189468569,189469439,189470245,189470878,189474332,189474808,189475552 Gene ID= ENSG00000115368.9 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr2 189560579 189580887 189560579 189580887 - ENST00000261024.6@SLC40A1 ENST00000261024.6 protein_coding 189580418,189579813,189575161,189572846,189571715,189565354,189563584,189560579 189580887,189579880,189575320,189572961,189571841,189565599,189564225,189562191 Gene ID= ENSG00000138449.10 TPM= 7583.04 Transcript Type= protein_coding chr2 189572521 189580741 189572521 189580741 - ENST00000479598.5@SLC40A1 ENST00000479598.5 protein_coding 189580418,189579813,189575161,189572521 189580741,189579880,189575320,189572961 Gene ID= ENSG00000138449.10 TPM= 9.06 Transcript Type= retained_intron chr2 189661399 189670830 189661399 189670830 + transcript4502.chr2.nic@ASNSD1 transcript4502.chr2.nic protein_coding 189661399,189663901,189665422,189666041,189667764,189670441 189661610,189663954,189665451,189667596,189667945,189670830 Gene ID= ENSG00000138381.9 TPM= 16.3 Transcript Type= NA chr2 189661420 189670831 189661420 189670831 + ENST00000260952.8@ASNSD1 ENST00000260952.8 protein_coding 189661420,189663901,189665376,189666041,189667764,189670441 189661610,189663954,189665451,189667596,189667945,189670831 Gene ID= ENSG00000138381.9 TPM= 57.95 Transcript Type= protein_coding chr2 189746689 189762770 189746689 189762770 - transcript4508.chr2.nic@OSGEPL1 transcript4508.chr2.nic protein_coding 189762567,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746689 189762770,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747331 Gene ID= ENSG00000128694.11 TPM= 2.56 Transcript Type= NA chr2 189746422 189762795 189746422 189762795 - transcript4509.chr2.nic@OSGEPL1 transcript4509.chr2.nic protein_coding 189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746422 189762795,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747331 Gene ID= ENSG00000128694.11 TPM= 14.33 Transcript Type= NA chr2 189746660 189762767 189746660 189762767 - ENST00000264151.9@OSGEPL1 ENST00000264151.9 protein_coding 189762685,189761420,189755173,189754141,189753916,189752849,189752653,189750550,189746660 189762767,189761660,189755560,189754345,189754064,189752979,189752724,189750656,189747168 Gene ID= ENSG00000128694.11 TPM= 7.54 Transcript Type= protein_coding chr2 189770324 189784030 189770324 189784030 - transcript4527.chr2.nnic@ORMDL1 transcript4527.chr2.nnic protein_coding 189783879,189783014,189782422,189775565,189770324 189784030,189783123,189782602,189775716,189771902 Gene ID= ENSG00000128699.13 TPM= 1.81 Transcript Type= NA chr2 189771313 189784344 189771313 189784344 - transcript4529.chr2.nnic@ORMDL1 transcript4529.chr2.nnic protein_coding 189784269,189783014,189782422,189775565,189771313 189784344,189783402,189782602,189775716,189771902 Gene ID= ENSG00000128699.13 TPM= 1.81 Transcript Type= NA chr2 189770324 189784038 189770324 189784038 - transcript4532.chr2.nic@ORMDL1 transcript4532.chr2.nic protein_coding 189783014,189782422,189775565,189770324 189784038,189782602,189775716,189771902 Gene ID= ENSG00000128699.13 TPM= 4.53 Transcript Type= NA chr2 189770323 189784364 189770323 189784364 - ENST00000392350.7@ORMDL1 ENST00000392350.7 protein_coding 189784269,189782422,189775565,189770323 189784364,189782602,189775716,189771902 Gene ID= ENSG00000128699.13 TPM= 32.6 Transcript Type= protein_coding chr2 189771312 189784371 189771312 189784371 - ENST00000392349.8@ORMDL1 ENST00000392349.8 protein_coding 189784269,189783014,189782422,189775565,189771312 189784371,189783123,189782602,189775716,189771902 Gene ID= ENSG00000128699.13 TPM= 11.77 Transcript Type= protein_coding chr2 189784381 189877629 189784381 189877629 + ENST00000441310.6@PMS1 ENST00000441310.6 protein_coding 189784381,189791790,189795769,189805652,189818017,189843964,189852655,189853939,189854239,189863743,189867799,189873496,189877272 189784593,189791941,189795951,189805754,189818180,189844080,189852777,189854082,189855128,189864228,189867929,189873656,189877629 Gene ID= ENSG00000064933.17 TPM= 9.06 Transcript Type= protein_coding chr2 190180863 190203484 190180863 190203484 + ENST00000340623.4@C2orf88 ENST00000340623.4 protein_coding 190180863,190199697 190181109,190203484 Gene ID= ENSG00000187699.10 TPM= 7.24 Transcript Type= protein_coding chr2 190204627 190344378 190204627 190344378 - transcript4548.chr2.nic@HIBCH transcript4548.chr2.nic protein_coding 190343992,190310754,190296813,190294546,190290405,190287586,190261156,190252162,190249640,190246154,190244887,190212956,190208880,190204627 190344378,190310796,190296953,190294630,190290485,190287638,190261234,190252307,190249726,190246212,190244968,190213075,190208913,190205232 Gene ID= ENSG00000198130.15 TPM= 9.06 Transcript Type= NA chr2 190343470 190371664 190343470 190371664 + ENST00000392329.6@INPP1 ENST00000392329.6 protein_coding 190343470,190348888,190360039,190362627,190366695,190369103,190370844 190343961,190349031,190360306,190362687,190366895,190369277,190371664 Gene ID= ENSG00000151689.12 TPM= 15.13 Transcript Type= protein_coding chr2 190334674 190371665 190334674 190371665 + transcript4566.chr2.nnic@INPP1 transcript4566.chr2.nnic protein_coding 190334674,190360039,190362627,190366695,190369103,190370844 190334900,190360306,190362687,190366895,190369277,190371665 Gene ID= ENSG00000151689.12 TPM= 10.6 Transcript Type= NA chr2 190343901 190371665 190343901 190371665 + transcript4568.chr2.nic@INPP1 transcript4568.chr2.nic protein_coding 190343901,190360039,190362627,190366695,190369103,190370844 190344078,190360306,190362687,190366895,190369277,190371665 Gene ID= ENSG00000151689.12 TPM= 5.17 Transcript Type= NA chr2 190344019 190371665 190344019 190371665 + transcript4570.chr2.nic@INPP1 transcript4570.chr2.nic protein_coding 190344019,190360039,190362627,190366695,190369103,190370844 190344218,190360306,190362687,190366895,190369277,190371665 Gene ID= ENSG00000151689.12 TPM= 6.98 Transcript Type= NA chr2 190343570 190371665 190343570 190371665 + ENST00000322522.8@INPP1 ENST00000322522.8 protein_coding 190343570,190360039,190362627,190366695,190369103,190370844 190343961,190360306,190362687,190366895,190369277,190371665 Gene ID= ENSG00000151689.12 TPM= 93.01 Transcript Type= protein_coding chr2 190407861 190502313 190407861 190502313 + transcript4578.chr2.nic@MFSD6 transcript4578.chr2.nic protein_coding 190407861,190435977,190469758,190488657,190489768,190497439,190500015 190408503,190437561,190469855,190488818,190489866,190497719,190502313 Gene ID= ENSG00000151690.14 TPM= 86.48 Transcript Type= NA chr2 190469493 190502313 190469493 190502313 + transcript4581.chr2.nic@MFSD6 transcript4581.chr2.nic protein_coding 190469493,190469758,190488657,190489768,190497439,190500015 190469649,190469855,190488818,190489866,190497719,190502313 Gene ID= ENSG00000151690.14 TPM= 8.6 Transcript Type= NA chr2 190408355 190502315 190408355 190502315 + ENST00000392328.5@MFSD6 ENST00000392328.5 protein_coding 190408355,190415292,190435977,190469758,190488657,190489768,190497439,190500015 190408503,190415413,190437561,190469855,190488818,190489866,190497719,190502315 Gene ID= ENSG00000151690.14 TPM= 43.01 Transcript Type= protein_coding chr2 190454091 190534744 190454091 190534744 - transcript4575.chr2.nnic@NEMP2 transcript4575.chr2.nnic protein_coding 190534559,190525263,190518952,190518736,190517520,190516270,190514453,190510361,190454091 190534744,190525378,190519183,190518808,190517613,190516384,190514678,190510537,190455571 Gene ID= ENSG00000189362.11 TPM= 1.81 Transcript Type= NA chr2 190648759 190692765 190648759 190692765 + transcript4582.chr2.nnic@NAB1 transcript4582.chr2.nnic protein_coding 190648759,190649846,190659158,190670326,190673101,190683738,190685476,190687201,190690245 190648971,190649982,190659995,190670459,190673152,190683827,190685638,190687317,190692765 Gene ID= ENSG00000138386.16 TPM= 2.72 Transcript Type= NA chr2 190880816 190935288 190880816 190935288 + transcript4615.chr2.nic@GLS transcript4615.chr2.nic protein_coding 190880816,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190932657 190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190935288 Gene ID= ENSG00000115419.12 TPM= 12.92 Transcript Type= NA chr2 190880834 190935289 190880834 190935289 + ENST00000338435.8@GLS ENST00000338435.8 protein_coding 190880834,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190932716 190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190935289 Gene ID= ENSG00000115419.12 TPM= 184.84 Transcript Type= protein_coding chr2 190880827 190965552 190880827 190965552 + ENST00000320717.7@GLS ENST00000320717.7 protein_coding 190880827,190895152,190895604,190900564,190901947,190905004,190910263,190921024,190921145,190923917,190924543,190927306,190930437,190931545,190953565,190954584,190954755,190962830 190881470,190895248,190895725,190900693,190902026,190905167,190910321,190921056,190921203,190923983,190924593,190927482,190930568,190931637,190953626,190954660,190954818,190965552 Gene ID= ENSG00000115419.12 TPM= 124.3 Transcript Type= protein_coding chr2 190969151 191014232 190969151 191014232 - transcript4632.chr2.nic@STAT1 transcript4632.chr2.nic protein_coding 191014018,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969151 191014232,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717 Gene ID= ENSG00000115415.18 TPM= 18.56 Transcript Type= NA chr2 190969034 191014250 190969034 191014250 - ENST00000361099.7@STAT1 ENST00000361099.7 protein_coding 191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975812,190974830,190969034 191014250,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887,190974932,190970717 Gene ID= ENSG00000115415.18 TPM= 139 Transcript Type= protein_coding chr2 190975537 191014168 190975537 191014168 - ENST00000392322.7@STAT1 ENST00000392322.7 protein_coding 191014018,191013525,191009876,191008963,191007563,191001074,190999626,190998217,190997856,190995061,190991228,190989615,190987039,190986854,190985619,190984310,190983642,190982383,190980620,190979772,190978856,190976840,190975537 191014168,191013678,191010004,191009107,191007661,191001163,190999704,190998308,190998007,190995219,190991320,190989674,190987068,190986947,190985660,190984393,190983740,190982518,190980669,190979866,190979001,190977025,190975887 Gene ID= ENSG00000115415.18 TPM= 19.02 Transcript Type= protein_coding chr2 191678096 191686940 191678096 191686940 + transcript4649.chr2.nic@NABP1 transcript4649.chr2.nic protein_coding 191678096,191678990,191681946,191682492,191684230,191685599 191678241,191679128,191682017,191683804,191684296,191686940 Gene ID= ENSG00000173559.12 TPM= 4.98 Transcript Type= NA chr2 191678136 191687688 191678136 191687688 + transcript4651.chr2.nic@NABP1 transcript4651.chr2.nic protein_coding 191678136,191678990,191681946,191682492,191684230,191685599 191678705,191679128,191682017,191683804,191684296,191687688 Gene ID= ENSG00000173559.12 TPM= 13.13 Transcript Type= NA chr2 191678127 191686939 191678127 191686939 + ENST00000307834.9@NABP1 ENST00000307834.9 protein_coding 191678127,191678990,191681946,191682492,191683729,191684230,191685599 191678241,191679128,191682017,191682595,191683804,191684296,191686939 Gene ID= ENSG00000173559.12 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr2 191834302 191847255 191834302 191847255 - ENST00000304141.4@CAVIN2 ENST00000304141.4 protein_coding 191846443,191834302 191847255,191836717 Gene ID= ENSG00000168497.4 TPM= 123.15 Transcript Type= protein_coding chr2 195657128 195737702 195657128 195737702 + ENST00000359634.9@SLC39A10 ENST00000359634.9 protein_coding 195657128,195680032,195683699,195706616,195708656,195713433,195716637,195718252,195728159,195734883 195657281,195681050,195683906,195706785,195708844,195713553,195717005,195718332,195728349,195737702 Gene ID= ENSG00000196950.13 TPM= 30.79 Transcript Type= protein_coding chr2 196764259 196799700 196764259 196799700 - transcript4667.chr2.nnic@GTF3C3 transcript4667.chr2.nnic protein_coding 196799510,196797797,196792956,196791337,196789879,196789204,196785441,196784768,196780559,196778896,196776427,196776010,196775116,196772916,196771748,196769915,196766565,196764259 196799700,196797908,196793152,196791460,196790070,196789369,196785588,196784929,196780662,196779067,196776629,196776111,196775251,196773153,196771938,196770039,196766717,196764685 Gene ID= ENSG00000119041.10 TPM= 1.81 Transcript Type= NA chr2 196763948 196799697 196763948 196799697 - transcript4670.chr2.nnic@GTF3C3 transcript4670.chr2.nnic protein_coding 196799510,196797797,196792956,196791337,196789879,196789204,196785441,196784857,196780559,196778896,196776427,196776010,196775116,196772916,196771748,196769915,196763948 196799697,196797908,196793152,196791460,196790070,196789369,196785588,196784929,196780662,196779067,196776629,196776111,196775251,196773153,196771938,196770039,196764685 Gene ID= ENSG00000119041.10 TPM= 2.72 Transcript Type= NA chr2 196763032 196799701 196763032 196799701 - ENST00000263956.7@GTF3C3 ENST00000263956.7 protein_coding 196799510,196797797,196792956,196791337,196789879,196789204,196785441,196784857,196780559,196778896,196776427,196776010,196775116,196772916,196771748,196769915,196766565,196763032 196799701,196797908,196793152,196791460,196790070,196789369,196785588,196784929,196780662,196779067,196776629,196776111,196775251,196773153,196771938,196770039,196766717,196764685 Gene ID= ENSG00000119041.10 TPM= 52.52 Transcript Type= protein_coding chr2 197389787 197435057 197389787 197435057 - transcript4682.chr2.nnic@SF3B1 transcript4682.chr2.nnic protein_coding 197434972,197423808,197421029,197420428,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398969,197398461,197397985,197396056,197392972,197389787 197435057,197423974,197421133,197420542,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197399038,197398581,197398116,197396328,197393188,197392461 Gene ID= ENSG00000115524.15 TPM= 8.33 Transcript Type= NA chr2 197389787 197435057 197389787 197435057 - transcript4683.chr2.nic@SF3B1 transcript4683.chr2.nic protein_coding 197434972,197423808,197421029,197420428,197418896,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197389787 197435057,197423974,197421133,197420542,197418951,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461 Gene ID= ENSG00000115524.15 TPM= 11.95 Transcript Type= NA chr2 197389784 197435091 197389784 197435091 - ENST00000335508.10@SF3B1 ENST00000335508.10 protein_coding 197434972,197423808,197421029,197420428,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197389784 197435091,197423974,197421133,197420542,197418588,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461 Gene ID= ENSG00000115524.15 TPM= 195.78 Transcript Type= protein_coding chr2 197389787 197435057 197389787 197435057 - transcript4688.chr2.nic@SF3B1 transcript4688.chr2.nic protein_coding 197434972,197423808,197421029,197418509,197416741,197409770,197408369,197407998,197405275,197405076,197403585,197402949,197402556,197401985,197401742,197401400,197400715,197400252,197400055,197398461,197397985,197396056,197392972,197389787 197435057,197423974,197421133,197420542,197416911,197410007,197408581,197408119,197405472,197405177,197403764,197403035,197402826,197402130,197401888,197401525,197400936,197400434,197400166,197398581,197398116,197396328,197393188,197392461 Gene ID= ENSG00000115524.15 TPM= 11.05 Transcript Type= NA chr2 197418796 197435079 197418796 197435079 - ENST00000414963.2@SF3B1 ENST00000414963.2 protein_coding 197434972,197423808,197421029,197420428,197418796 197435079,197423974,197421133,197420542,197418951 Gene ID= ENSG00000115524.15 TPM= 1.81 Transcript Type= protein_coding chr2 197453423 197475308 197453423 197475308 + ENST00000263960.6@COQ10B ENST00000263960.6 protein_coding 197453423,197459932,197462539,197470070,197473757 197453664,197460081,197462731,197470171,197475308 Gene ID= ENSG00000115520.8 TPM= 105.04 Transcript Type= protein_coding chr2 197486581 197500047 197486581 197500047 - ENST00000388968.7@HSPD1 ENST00000388968.7 protein_coding 197499782,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486581 197500047,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198 Gene ID= ENSG00000144381.16 TPM= 2008.24 Transcript Type= protein_coding chr2 197486586 197500274 197486586 197500274 - ENST00000345042.6@HSPD1 ENST00000345042.6 protein_coding 197500160,197498675,197497140,197495294,197494657,197494157,197493324,197490197,197489002,197488317,197487858,197486586 197500274,197498850,197497392,197495376,197494752,197494250,197493492,197490296,197489247,197488491,197488036,197487198 Gene ID= ENSG00000144381.16 TPM= 32.03 Transcript Type= protein_coding chr2 197499994 197503457 197499994 197503457 + ENST00000233893.9@HSPE1 ENST00000233893.9 protein_coding 197499994,197501074,197503039,197503209 197500439,197501238,197503128,197503457 Gene ID= ENSG00000115541.10 TPM= 391.8 Transcript Type= protein_coding chr2 197500379 197503382 197500379 197503382 + ENST00000409468.1@HSPE1 ENST00000409468.1 protein_coding 197500379,197501074,197503039 197500439,197501238,197503382 Gene ID= ENSG00000115541.10 TPM= 3.02 Transcript Type= protein_coding chr2 197515832 197553699 197515832 197553699 + ENST00000323303.8@MOB4 ENST00000323303.8 protein_coding 197515832,197523624,197535530,197540111,197540351,197548336,197550275,197550515 197516146,197523686,197535630,197540153,197540437,197548415,197550386,197553699 Gene ID= ENSG00000115540.14 TPM= 71.54 Transcript Type= protein_coding chr2 197568224 197675995 197568224 197675995 - ENST00000295049.8@RFTN2 ENST00000295049.8 protein_coding 197675320,197646483,197644158,197633718,197631011,197617800,197615876,197595991,197568224 197675995,197646666,197644272,197633997,197631220,197617921,197615979,197596069,197572280 Gene ID= ENSG00000162944.10 TPM= 17.66 Transcript Type= protein_coding chr2 197629861 197675588 197629861 197675588 - transcript4755.chr2.nnic@RFTN2 transcript4755.chr2.nnic protein_coding 197675320,197646483,197644158,197633718,197629861 197675588,197646666,197644274,197633997,197631220 Gene ID= ENSG00000162944.10 TPM= 4.07 Transcript Type= NA chr2 199269500 199458096 199269500 199458096 - ENST00000417098.5@SATB2 ENST00000417098.5 protein_coding 199457339,199455869,199433338,199381694,199380364,199368605,199348701,199328698,199323803,199308760,199269500 199458096,199456096,199433514,199381820,199380487,199368707,199349173,199328910,199323958,199308957,199272672 Gene ID= ENSG00000119042.16 TPM= 3.62 Transcript Type= protein_coding chr2 199660757 199851206 199660757 199851206 - transcript4759.chr2.nnic@FTCDNL1 transcript4759.chr2.nnic protein_coding 199850759,199848848,199846075,199667338,199660757 199851206,199848969,199846170,199667469,199664037 Gene ID= ENSG00000226124.6 TPM= 4.53 Transcript Type= NA chr2 199760503 199851212 199760503 199851212 - transcript4767.chr2.nnic@FTCDNL1 transcript4767.chr2.nnic protein_coding 199851072,199848848,199846075,199760503 199851212,199848969,199846170,199760835 Gene ID= ENSG00000226124.6 TPM= 3.02 Transcript Type= NA chr2 199818361 199851206 199818361 199851206 - transcript4769.chr2.nic@FTCDNL1 transcript4769.chr2.nic protein_coding 199850759,199848848,199846075,199818361 199851206,199848969,199846170,199819757 Gene ID= ENSG00000226124.6 TPM= 9.96 Transcript Type= NA chr2 199818361 199851212 199818361 199851212 - transcript4770.chr2.nnic@FTCDNL1 transcript4770.chr2.nnic protein_coding 199851072,199848848,199846075,199818361 199851212,199848969,199846170,199819757 Gene ID= ENSG00000226124.6 TPM= 2.72 Transcript Type= NA chr2 199842757 199851212 199842757 199851212 - transcript4772.chr2.nnic@FTCDNL1 transcript4772.chr2.nnic protein_coding 199851072,199848848,199846075,199842757 199851212,199848969,199846170,199844532 Gene ID= ENSG00000226124.6 TPM= 1.81 Transcript Type= NA chr2 199760544 199851173 199760544 199851173 - ENST00000416668.5@FTCDNL1 ENST00000416668.5 protein_coding 199850740,199848848,199846075,199760544 199851173,199848969,199846170,199760835 Gene ID= ENSG00000226124.6 TPM= 2.11 Transcript Type= protein_coding chr2 199760550 199850873 199760550 199850873 - ENST00000420922.6@FTCDNL1 ENST00000420922.6 protein_coding 199850759,199848848,199846075,199844380,199760550 199850873,199848969,199846170,199844532,199760835 Gene ID= ENSG00000226124.6 TPM= 1.2 Transcript Type= protein_coding chr2 199818360 199851120 199818360 199851120 - ENST00000622774.1@FTCDNL1 ENST00000622774.1 protein_coding 199850740,199848848,199846075,199818360 199851120,199848969,199846170,199819757 Gene ID= ENSG00000226124.6 TPM= 11.77 Transcript Type= protein_coding chr2 199911324 199928267 199911324 199928267 + transcript4775.chr2.nnic@C2orf69 transcript4775.chr2.nnic protein_coding 199911324,199918383,199925062 199911771,199918504,199928267 Gene ID= ENSG00000178074.5 TPM= 3.17 Transcript Type= NA chr2 199911329 199927307 199911329 199927307 + transcript4776.chr2.nnic@C2orf69 transcript4776.chr2.nnic protein_coding 199911329,199923831,199925062 199911771,199923933,199927307 Gene ID= ENSG00000178074.5 TPM= 1.81 Transcript Type= NA chr2 199911256 199928273 199911256 199928273 + ENST00000319974.5@C2orf69 ENST00000319974.5 protein_coding 199911256,199925062 199911771,199928273 Gene ID= ENSG00000178074.5 TPM= 62.94 Transcript Type= protein_coding chr2 199929975 199955736 199929975 199955736 - ENST00000354611.8@TYW5 ENST00000354611.8 protein_coding 199955393,199948318,199943765,199940089,199938933,199936405,199935931,199929975 199955736,199948472,199943834,199940133,199939070,199936492,199936047,199933323 Gene ID= ENSG00000162971.10 TPM= 2.26 Transcript Type= protein_coding chr2 199929975 199955736 199929975 199955736 - ENST00000483328.5@TYW5 ENST00000483328.5 protein_coding 199955393,199948337,199943765,199940089,199938933,199936405,199935931,199929975 199955736,199948472,199943834,199940133,199939070,199936492,199936047,199933323 Gene ID= ENSG00000162971.10 TPM= 4.07 Transcript Type= nonsense_mediated_decay chr2 200306922 200478529 200306922 200478529 + transcript4789.chr2.nnic@SPATS2L transcript4789.chr2.nnic protein_coding 200306922,200308887,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636 200307878,200309090,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478529 Gene ID= ENSG00000196141.13 TPM= 2.72 Transcript Type= NA chr2 200306542 200478531 200306542 200478531 + transcript4798.chr2.nic@SPATS2L transcript4798.chr2.nic protein_coding 200306542,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636 200306922,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478531 Gene ID= ENSG00000196141.13 TPM= 29.73 Transcript Type= NA chr2 200306524 200478530 200306524 200478530 + ENST00000360760.9@SPATS2L ENST00000360760.9 protein_coding 200306524,200329431,200389223,200412311,200416379,200419250,200440649,200459769,200467290,200469914,200472832,200477636 200306601,200329480,200389283,200412419,200416428,200419496,200440784,200459827,200467399,200470016,200473052,200478530 Gene ID= ENSG00000196141.13 TPM= 9.81 Transcript Type= protein_coding chr2 200306708 200478530 200306708 200478530 + ENST00000409140.7@SPATS2L ENST00000409140.7 protein_coding 200306708,200329431,200389223,200412311,200416379,200419250,200439122,200440649,200459769,200467290,200469914,200472832,200477636 200306922,200329480,200389283,200412419,200416428,200419496,200439328,200440784,200459827,200467399,200470016,200473052,200478530 Gene ID= ENSG00000196141.13 TPM= 17.5 Transcript Type= protein_coding chr2 200488952 200510063 200488952 200510063 - ENST00000359878.7@KCTD18 ENST00000359878.7 protein_coding 200509628,200506857,200504748,200498891,200497753,200493172,200488952 200510063,200507091,200504959,200499084,200497847,200493274,200490616 Gene ID= ENSG00000155729.12 TPM= 10.87 Transcript Type= protein_coding chr2 200488958 200510068 200488958 200510068 - ENST00000409157.5@KCTD18 ENST00000409157.5 protein_coding 200510011,200506857,200504748,200498891,200497753,200493172,200488958 200510068,200507091,200504959,200499084,200497847,200493274,200490616 Gene ID= ENSG00000155729.12 TPM= 11.77 Transcript Type= protein_coding chr2 200510200 200583803 200510200 200583803 + transcript4807.chr2.nic@SGO2 transcript4807.chr2.nic protein_coding 200510200,200526136,200532974,200534996,200536065,200542579,200569663,200571050,200575311,200583449 200510266,200526252,200533108,200535171,200536142,200542664,200569892,200573977,200575461,200583803 Gene ID= ENSG00000163535.17 TPM= 1.81 Transcript Type= NA chr2 200526157 200583782 200526157 200583782 + ENST00000357799.8@SGO2 ENST00000357799.8 protein_coding 200526157,200532974,200534996,200536065,200542579,200569663,200571050,200575311,200583449 200526252,200533108,200535171,200536142,200542664,200569892,200573977,200575461,200583782 Gene ID= ENSG00000163535.17 TPM= 3.62 Transcript Type= protein_coding chr2 200585868 200671495 200585868 200671495 + ENST00000374700.6@AOX1 ENST00000374700.6 protein_coding 200585868,200593146,200595272,200597397,200599620,200602284,200603267,200604017,200604696,200605536,200608984,200609321,200611384,200612609,200613804,200615971,200620650,200621120,200623861,200627353,200634791,200636911,200638215,200641098,200642610,200650974,200656842,200659165,200659995,200661579,200662855,200666687,200668615,200669575,200670629 200586153,200593203,200595368,200597505,200599746,200602345,200603356,200604097,200604840,200605628,200609135,200609414,200611493,200612793,200613966,200616063,200620819,200621246,200623983,200627449,200634915,200637044,200638302,200641184,200642801,200651201,200656937,200659293,200660069,200661631,200662969,200666752,200668803,200669742,200671495 Gene ID= ENSG00000138356.13 TPM= 1130.91 Transcript Type= protein_coding chr2 200811546 200824543 200811546 200824543 + transcript4862.chr2.nic@BZW1 transcript4862.chr2.nic protein_coding 200811546,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147 200811727,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200824543 Gene ID= ENSG00000082153.17 TPM= 39.09 Transcript Type= NA chr2 200811546 200827338 200811546 200827338 + ENST00000409600.5@BZW1 ENST00000409600.5 protein_coding 200811546,200813208,200815341,200815667,200816325,200817106,200817974,200818223,200818755,200819982,200821183,200822147 200811990,200813281,200815517,200815761,200816390,200817241,200818083,200818393,200818901,200820120,200821305,200827338 Gene ID= ENSG00000082153.17 TPM= 269.55 Transcript Type= protein_coding chr2 200853009 200864744 200853009 200864744 - ENST00000621181.4@CLK1 ENST00000621181.4 protein_coding 200864564,200861702,200861238,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853009 200864744,200861862,200861466,200859747,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449 Gene ID= ENSG00000013441.15 TPM= 2.72 Transcript Type= protein_coding chr2 200853009 200864699 200853009 200864699 - ENST00000321356.8@CLK1 ENST00000321356.8 protein_coding 200864564,200861702,200861238,200860125,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853009 200864699,200861862,200861466,200860215,200859746,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449 Gene ID= ENSG00000013441.15 TPM= 10.87 Transcript Type= protein_coding chr2 200853081 200864691 200853081 200864691 - ENST00000473565.5@CLK1 ENST00000473565.5 protein_coding 200864564,200861702,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081 200864691,200861862,200861466,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449 Gene ID= ENSG00000013441.15 TPM= 18.11 Transcript Type= retained_intron chr2 200853081 200864656 200853081 200864656 - ENST00000432425.5@CLK1 ENST00000432425.5 protein_coding 200864564,200861702,200861238,200859680,200857973,200857718,200856891,200856682,200855004,200854616,200853903,200853081 200864656,200861862,200861466,200859746,200858089,200857884,200856985,200856811,200855086,200854695,200853993,200853449 Gene ID= ENSG00000013441.15 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr2 200870974 200889292 200870974 200889292 - transcript4878.chr2.nic@PPIL3 transcript4878.chr2.nic protein_coding 200889244,200887613,200885698,200882342,200881421,200876919,200870974 200889292,200887685,200885772,200882435,200881488,200877037,200871521 Gene ID= ENSG00000240344.8 TPM= 4.53 Transcript Type= NA chr2 200870907 200889269 200870907 200889269 - ENST00000286175.12@PPIL3 ENST00000286175.12 protein_coding 200888956,200887613,200885698,200885262,200881421,200876919,200870907 200889269,200887685,200885772,200885367,200881488,200877037,200871521 Gene ID= ENSG00000240344.8 TPM= 2.72 Transcript Type= protein_coding chr2 200870956 200889154 200870956 200889154 - ENST00000392283.8@PPIL3 ENST00000392283.8 protein_coding 200888956,200887613,200885698,200882342,200881421,200876919,200870956 200889154,200887685,200885772,200882435,200881488,200877037,200871521 Gene ID= ENSG00000240344.8 TPM= 7.24 Transcript Type= protein_coding chr2 200889356 200904962 200889356 200904962 + transcript4881.chr2.nnic@NIF3L1 transcript4881.chr2.nnic protein_coding 200889356,200891918,200893246,200895264,200897076,200899385,200903494 200889391,200892379,200893408,200895390,200897214,200899468,200904962 Gene ID= ENSG00000196290.14 TPM= 10.64 Transcript Type= NA chr2 200889402 200903939 200889402 200903939 + transcript4887.chr2.nic@NIF3L1 transcript4887.chr2.nic protein_coding 200889402,200893246,200895264,200897076,200899385,200903494 200892379,200893408,200895390,200897214,200899468,200903939 Gene ID= ENSG00000196290.14 TPM= 3.4 Transcript Type= NA chr2 200889385 200903930 200889385 200903930 + ENST00000409020.5@NIF3L1 ENST00000409020.5 protein_coding 200889385,200891918,200893246,200895264,200897076,200899385,200903494 200889652,200892379,200893408,200895390,200897214,200899468,200903930 Gene ID= ENSG00000196290.14 TPM= 5.66 Transcript Type= protein_coding chr2 200889388 200903930 200889388 200903930 + ENST00000359683.8@NIF3L1 ENST00000359683.8 protein_coding 200889388,200891969,200893246,200895264,200897076,200899385,200903494 200889652,200892379,200893408,200895390,200897214,200899468,200903930 Gene ID= ENSG00000196290.14 TPM= 6.57 Transcript Type= protein_coding chr2 200978492 201071636 200978492 201071636 - transcript4896.chr2.nnic@FAM126B transcript4896.chr2.nnic protein_coding 201071454,201045496,201023959,201022831,201016991,201011392,201008973,200997445,200992887,200992281,200988262,200978492 201071636,201045593,201024039,201022932,201017170,201011472,201009088,200997540,200993003,200992368,200988421,200981871 Gene ID= ENSG00000155744.9 TPM= 1.81 Transcript Type= NA chr2 200973718 201071669 200973718 201071669 - ENST00000418596.7@FAM126B ENST00000418596.7 protein_coding 201071610,201045496,201023959,201022831,201016991,201011392,201008973,200997445,200992887,200992281,200988262,200973718 201071669,201045593,201024039,201022932,201017170,201011472,201009088,200997540,200993003,200992368,200988421,200981871 Gene ID= ENSG00000155744.9 TPM= 5.43 Transcript Type= protein_coding chr2 201072030 201085750 201072030 201085750 + ENST00000454214.1@NDUFB3 ENST00000454214.1 protein_coding 201072030,201072279,201078881,201085459 201072059,201072361,201079022,201085750 Gene ID= ENSG00000119013.8 TPM= 24.9 Transcript Type= protein_coding chr2 201071739 201085750 201071739 201085750 + ENST00000237889.8@NDUFB3 ENST00000237889.8 protein_coding 201071739,201078881,201085459 201072059,201079022,201085750 Gene ID= ENSG00000119013.8 TPM= 100.06 Transcript Type= protein_coding chr2 201116162 201164313 201116162 201164313 + transcript4900.chr2.nic@CFLAR transcript4900.chr2.nic protein_coding 201116162,201129729,201133029,201135972,201140357,201145378,201149003,201149754,201160432,201162996 201116481,201130146,201133134,201136107,201140439,201145432,201149052,201149835,201160942,201164313 Gene ID= ENSG00000003402.19 TPM= 3.92 Transcript Type= NA chr2 201116161 201141602 201116161 201141602 + transcript4907.chr2.nnic@CFLAR transcript4907.chr2.nnic protein_coding 201116161,201129729,201133029,201135972,201136198,201140357,201141374 201116481,201130146,201133134,201136107,201138964,201140439,201141602 Gene ID= ENSG00000003402.19 TPM= 2.11 Transcript Type= NA chr2 201116824 201141600 201116824 201141600 + transcript4911.chr2.nic@CFLAR transcript4911.chr2.nic protein_coding 201116824,201129729,201133029,201135972,201140357,201141374 201118901,201130146,201133134,201136107,201140439,201141600 Gene ID= ENSG00000003402.19 TPM= 9.51 Transcript Type= NA chr2 201117773 201139877 201117773 201139877 + transcript4913.chr2.nic@CFLAR transcript4913.chr2.nic protein_coding 201117773,201129729,201133029,201135972,201136198 201118901,201130146,201133134,201136107,201139877 Gene ID= ENSG00000003402.19 TPM= 2.72 Transcript Type= NA chr2 201116167 201141598 201116167 201141598 + ENST00000341222.10@CFLAR ENST00000341222.10 protein_coding 201116167,201129729,201133029,201135972,201140357,201141374 201116481,201130146,201133134,201136107,201140439,201141598 Gene ID= ENSG00000003402.19 TPM= 9.81 Transcript Type= protein_coding chr2 201116407 201139877 201116407 201139877 + ENST00000395148.6@CFLAR ENST00000395148.6 protein_coding 201116407,201129729,201133029,201135972,201136198 201116481,201130146,201133134,201136107,201139877 Gene ID= ENSG00000003402.19 TPM= 3.62 Transcript Type= protein_coding chr2 201258022 201287720 201258022 201287720 + transcript4921.chr2.nic@CASP8 transcript4921.chr2.nic protein_coding 201258022,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459 201258154,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287720 Gene ID= ENSG00000064012.21 TPM= 7.37 Transcript Type= NA chr2 201260538 201287720 201260538 201287720 + transcript4926.chr2.nic@CASP8 transcript4926.chr2.nic protein_coding 201260538,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459 201260613,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287720 Gene ID= ENSG00000064012.21 TPM= 1.94 Transcript Type= NA chr2 201260538 201287720 201260538 201287720 + transcript4927.chr2.nic@CASP8 transcript4927.chr2.nic protein_coding 201260538,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459 201260613,201266791,201271621,201272776,201272942,201274953,201277104,201285317,201287720 Gene ID= ENSG00000064012.21 TPM= 1.94 Transcript Type= NA chr2 201258022 201287720 201258022 201287720 + transcript4929.chr2.nic@CASP8 transcript4929.chr2.nic protein_coding 201258022,201266461,201271516,201272638,201274889,201276827,201284816,201286459 201258154,201266791,201271621,201272776,201274953,201276968,201285317,201287720 Gene ID= ENSG00000064012.21 TPM= 5.56 Transcript Type= NA chr2 201258035 201287720 201258035 201287720 + transcript4931.chr2.nic@CASP8 transcript4931.chr2.nic protein_coding 201258035,201266461,201271516,201272638,201274889,201276827,201284816,201286459 201258382,201266791,201271621,201272776,201274953,201276968,201285317,201287720 Gene ID= ENSG00000064012.21 TPM= 6.47 Transcript Type= NA chr2 201258036 201287711 201258036 201287711 + ENST00000358485.8@CASP8 ENST00000358485.8 protein_coding 201258036,201266461,201271516,201272638,201272898,201274889,201276827,201284816,201286459 201258382,201266791,201271621,201272776,201272942,201274953,201276968,201285317,201287711 Gene ID= ENSG00000064012.21 TPM= 5.56 Transcript Type= protein_coding chr2 201377207 201451579 201377207 201451579 - ENST00000332624.7@TRAK2 ENST00000332624.7 protein_coding 201451350,201420417,201407403,201401018,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201377207 201451579,201420706,201407597,201401094,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218 Gene ID= ENSG00000115993.12 TPM= 24.45 Transcript Type= protein_coding chr2 201377229 201451578 201377229 201451578 - transcript4936.chr2.nnic@TRAK2 transcript4936.chr2.nnic protein_coding 201451350,201420417,201407403,201399377,201398145,201397502,201395314,201394798,201392909,201389801,201389300,201387703,201386218,201384111,201377229 201451578,201420706,201407597,201399493,201398354,201397580,201395444,201394872,201393046,201389880,201389503,201388001,201386484,201384216,201381218 Gene ID= ENSG00000115993.12 TPM= 2.72 Transcript Type= NA chr2 201451669 201480846 201451669 201480846 + ENST00000194530.7@STRADB ENST00000194530.7 protein_coding 201451669,201454746,201458784,201469953,201472955,201474647,201475619,201477619,201478087,201478357,201479489,201480032 201451938,201454852,201458864,201470052,201473076,201474755,201475742,201477790,201478191,201478601,201479531,201480846 Gene ID= ENSG00000082146.12 TPM= 156.89 Transcript Type= protein_coding chr2 201620184 201642944 201620184 201642944 - ENST00000409444.6@TMEM237 ENST00000409444.6 protein_coding 201642609,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184 201642944,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322 Gene ID= ENSG00000155755.18 TPM= 25.36 Transcript Type= protein_coding chr2 201620184 201643517 201620184 201643517 - ENST00000409883.6@TMEM237 ENST00000409883.6 protein_coding 201643359,201640893,201640261,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201620184 201643517,201640924,201640265,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322 Gene ID= ENSG00000155755.18 TPM= 8.15 Transcript Type= protein_coding chr2 201623756 201643484 201623756 201643484 - ENST00000286196.9@TMEM237 ENST00000286196.9 protein_coding 201643359,201640893,201638989,201636748,201633311,201632051,201629729,201629230,201628076,201627321,201626026,201623756 201643484,201640924,201639045,201636885,201633431,201632208,201629852,201629421,201628149,201627414,201626147,201624322 Gene ID= ENSG00000155755.18 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr2 201700554 201781189 201700554 201781189 - ENST00000264276.10@ALS2 ENST00000264276.10 protein_coding 201780877,201768866,201767229,201760881,201757402,201754503,201753146,201749712,201746566,201744258,201741674,201738670,201733276,201729052,201728512,201727705,201727212,201726664,201726484,201725356,201724295,201723330,201723043,201718077,201715672,201710991,201709881,201707869,201706846,201705416,201705139,201704454,201704122,201700554 201781189,201768945,201767383,201761818,201757759,201754671,201753242,201749789,201746748,201744429,201741854,201738735,201733438,201729183,201728640,201727775,201727278,201726866,201726549,201725454,201724459,201723441,201723120,201718210,201715839,201711108,201710038,201707991,201707022,201705461,201705200,201704603,201704218,201701889 Gene ID= ENSG00000003393.14 TPM= 6.34 Transcript Type= protein_coding chr2 201759457 201780956 201759457 201780956 - ENST00000467448.5@ALS2 ENST00000467448.5 protein_coding 201780877,201768866,201767229,201759457 201780956,201768945,201767383,201761818 Gene ID= ENSG00000003393.14 TPM= 9.96 Transcript Type= protein_coding chr2 202206187 202238599 202206187 202238599 - ENST00000392245.5@SUMO1 ENST00000392245.5 protein_coding 202238440,202220032,202214357,202210735,202207253,202206187 202238599,202220106,202214434,202210806,202207321,202206803 Gene ID= ENSG00000116030.16 TPM= 1.81 Transcript Type= protein_coding chr2 202206180 202238608 202206180 202238608 - ENST00000392246.6@SUMO1 ENST00000392246.6 protein_coding 202238440,202220032,202214357,202210735,202206180 202238608,202220106,202214434,202210806,202207321 Gene ID= ENSG00000116030.16 TPM= 181.11 Transcript Type= protein_coding chr2 202265722 202303659 202265722 202303659 + transcript4966.chr2.nic@NOP58 transcript4966.chr2.nic protein_coding 202265722,202275113,202277950,202278212,202282351,202284345,202287660,202290323,202291125,202292777,202295674,202297379,202297845,202300234,202302921,202303386 202265986,202275189,202278002,202278329,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202303057,202303659 Gene ID= ENSG00000055044.10 TPM= 1.81 Transcript Type= NA chr2 202265722 202303659 202265722 202303659 + transcript4967.chr2.nic@NOP58 transcript4967.chr2.nic protein_coding 202265722,202275113,202277950,202282351,202284345,202287660,202290323,202291021,202292777,202295674,202297379,202297845,202300234,202302921,202303386 202265986,202275189,202278002,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202303057,202303659 Gene ID= ENSG00000055044.10 TPM= 1.81 Transcript Type= NA chr2 202265716 202303666 202265716 202303666 + ENST00000264279.9@NOP58 ENST00000264279.9 protein_coding 202265716,202275113,202277950,202282351,202284345,202287660,202290323,202291125,202292777,202295674,202297379,202297845,202300234,202302921,202303386 202265986,202275189,202278002,202282472,202284481,202287724,202290457,202291270,202292903,202295837,202297513,202297906,202300367,202303057,202303666 Gene ID= ENSG00000055044.10 TPM= 31.69 Transcript Type= protein_coding chr2 202634851 202769762 202634851 202769762 + transcript4976.chr2.nnic@FAM117B transcript4976.chr2.nnic protein_coding 202634851,202635614,202695881,202724917,202726250,202755538,202757213,202759233,202765446 202635341,202635788,202696032,202725009,202726363,202755681,202757438,202759353,202769762 Gene ID= ENSG00000138439.11 TPM= 9.06 Transcript Type= NA chr2 202874782 202912226 202874782 202912226 - ENST00000261015.4@WDR12 ENST00000261015.4 protein_coding 202911436,202907865,202901025,202899531,202897300,202896065,202894581,202892617,202884395,202884198,202883609,202882711,202874782 202912226,202907959,202901119,202899637,202897415,202896219,202894626,202892702,202884535,202884303,202883741,202882783,202880937 Gene ID= ENSG00000138442.9 TPM= 22.64 Transcript Type= protein_coding chr2 202912214 202987063 202912214 202987063 + ENST00000402905.7@CARF ENST00000402905.7 protein_coding 202912214,202917877,202941860,202942740,202952559,202954005,202955674,202961237,202966978,202969919,202971505,202974334,202977269,202981555,202982072,202983506 202912324,202918043,202941980,202942967,202952679,202954134,202955758,202961426,202967098,202970062,202971738,202974496,202977332,202981685,202982441,202987063 Gene ID= ENSG00000138380.17 TPM= 4.53 Transcript Type= protein_coding chr2 203238969 203327501 203238969 203327501 + transcript4995.chr2.nnic@CYP20A1 transcript4995.chr2.nnic protein_coding 203238969,203245846,203246755,203251967,203266514,203272670,203278573,203280059,203285612,203289765,203292262,203296474,203324985,203326826 203239134,203245895,203246921,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203325117,203327501 Gene ID= ENSG00000119004.15 TPM= 1.81 Transcript Type= NA chr2 203238982 203297014 203238982 203297014 + ENST00000461371.5@CYP20A1 ENST00000461371.5 protein_coding 203238982,203251967,203266514,203272670,203278573,203280059,203285612,203289765,203292262,203296474,203296758 203239134,203252109,203266681,203272748,203278688,203280113,203285732,203289876,203292326,203296563,203297014 Gene ID= ENSG00000119004.15 TPM= 3.62 Transcript Type= processed_transcript chr2 203328280 203432173 203328280 203432173 + ENST00000261017.9@ABI2 ENST00000261017.9 protein_coding 203328280,203366877,203380208,203391046,203394700,203395656,203402576,203411285,203416908,203427177 203328631,203367044,203380384,203391143,203394846,203395780,203402734,203411371,203417081,203432173 Gene ID= ENSG00000138443.15 TPM= 10.41 Transcript Type= protein_coding chr2 203328279 203432168 203328279 203432168 + transcript5007.chr2.nic@ABI2 transcript5007.chr2.nic protein_coding 203328279,203366877,203380208,203391046,203394700,203395656,203402576,203416908,203427177 203328631,203367044,203380384,203391143,203394846,203395780,203402734,203417081,203432168 Gene ID= ENSG00000138443.15 TPM= 8.6 Transcript Type= NA chr2 204965150 205554505 204965150 205554505 + transcript5010.chr2.nic@PARD3B transcript5010.chr2.nic protein_coding 204965150,205047581,205104426,205113491,205118921,205121591,205124327,205125609,205158722,205172211,205176445,205185764,205193205,205245778,205300530,205301464,205401013,205440370,205499896,205553324 204965323,205047690,205104514,205113577,205119046,205121949,205124466,205125737,205158907,205172381,205176577,205185863,205193320,205245822,205300736,205301701,205401123,205440672,205500031,205554505 Gene ID= ENSG00000116117.17 TPM= 2.72 Transcript Type= NA chr2 205682449 205798132 205682449 205798132 + transcript5012.chr2.nic@NRP2 transcript5012.chr2.nic protein_coding 205682449,205683091,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203,205745746,205749725,205752835,205763674,205765474,205766783,205792235,205794754 205682905,205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743552,205745890,205749841,205752975,205763936,205765570,205766803,205792285,205798132 Gene ID= ENSG00000118257.16 TPM= 2.72 Transcript Type= NA chr2 205682451 205795573 205682451 205795573 + transcript5013.chr2.nic@NRP2 transcript5013.chr2.nic protein_coding 205682451,205683091,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203,205745746,205749725,205752835,205763674,205765474,205766783,205792235,205794754 205682578,205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743552,205745890,205749841,205752975,205763936,205765570,205766803,205792285,205795573 Gene ID= ENSG00000118257.16 TPM= 1.81 Transcript Type= NA chr2 205682501 205779711 205682501 205779711 + transcript5017.chr2.nic@NRP2 transcript5017.chr2.nic protein_coding 205682501,205683091,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203,205745746,205749725,205752835,205763674,205765474,205766783,205776246 205682905,205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743552,205745890,205749841,205752975,205763936,205765570,205766803,205779711 Gene ID= ENSG00000118257.16 TPM= 14.49 Transcript Type= NA chr2 205682431 205743697 205682431 205743697 + transcript5027.chr2.nic@NRP2 transcript5027.chr2.nic protein_coding 205682431,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203 205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743697 Gene ID= ENSG00000118257.16 TPM= 1.81 Transcript Type= NA chr2 205682500 205798133 205682500 205798133 + ENST00000360409.7@NRP2 ENST00000360409.7 protein_coding 205682500,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203,205745746,205749725,205752835,205763674,205765474,205766783,205792235,205794754 205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743552,205745890,205749841,205752975,205763936,205765570,205766818,205792285,205798133 Gene ID= ENSG00000118257.16 TPM= 23.54 Transcript Type= protein_coding chr2 205682507 205743698 205682507 205743698 + ENST00000417189.5@NRP2 ENST00000417189.5 protein_coding 205682507,205683091,205697544,205716193,205722478,205723785,205725913,205727891,205740519,205743203 205682905,205683363,205697721,205716374,205722708,205723940,205726082,205728046,205740663,205743698 Gene ID= ENSG00000118257.16 TPM= 1.81 Transcript Type= protein_coding chr2 206114817 206159603 206114817 206159603 - ENST00000233190.10@NDUFS1 ENST00000233190.10 protein_coding 206159341,206153618,206152419,206149818,206149020,206147753,206147531,206146903,206144892,206144018,206142686,206141941,206138485,206132945,206130088,206127797,206126710,206126539,206114817 206159603,206153682,206152510,206149925,206149096,206147834,206147661,206147088,206145026,206144132,206142831,206142069,206138614,206133105,206130242,206127972,206126844,206126611,206124276 Gene ID= ENSG00000023228.13 TPM= 284.79 Transcript Type= protein_coding chr2 206159585 206162928 206159585 206162928 + ENST00000236957.9@EEF1B2 ENST00000236957.9 protein_coding 206159585,206159959,206160588,206161346,206162038,206162489,206162729 206159684,206160059,206160710,206161472,206162104,206162614,206162928 Gene ID= ENSG00000114942.13 TPM= 19.4 Transcript Type= protein_coding chr2 206159594 206162927 206159594 206162927 + ENST00000392221.5@EEF1B2 ENST00000392221.5 protein_coding 206159594,206159913,206160588,206161346,206162038,206162489,206162729 206159684,206160059,206160710,206161472,206162104,206162614,206162927 Gene ID= ENSG00000114942.13 TPM= 17.59 Transcript Type= protein_coding chr2 206159605 206162928 206159605 206162928 + ENST00000392222.6@EEF1B2 ENST00000392222.6 protein_coding 206159605,206160588,206161346,206162038,206162489,206162729 206160059,206160710,206161472,206162104,206162614,206162928 Gene ID= ENSG00000114942.13 TPM= 198.69 Transcript Type= protein_coding chr2 206443364 206618972 206443364 206618972 + transcript5050.chr2.nic@ADAM23 transcript5050.chr2.nic protein_coding 206443364,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051,206617579 206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206596162,206618972 Gene ID= ENSG00000114948.12 TPM= 8.15 Transcript Type= NA chr2 206443532 206596429 206443532 206596429 + transcript5051.chr2.nic@ADAM23 transcript5051.chr2.nic protein_coding 206443532,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051 206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206596429 Gene ID= ENSG00000114948.12 TPM= 1.81 Transcript Type= NA chr2 206443539 206621130 206443539 206621130 + ENST00000264377.7@ADAM23 ENST00000264377.7 protein_coding 206443539,206445307,206481232,206530885,206542052,206543253,206547429,206548281,206550095,206557427,206559955,206561128,206562203,206565020,206567223,206570740,206571727,206573115,206587325,206588091,206589409,206592617,206594737,206596051,206609910,206617579 206444080,206445524,206481308,206530948,206542134,206543316,206547501,206548354,206550160,206557498,206560118,206561212,206562293,206565068,206567322,206570811,206571816,206573195,206587375,206588154,206589514,206592736,206594905,206596162,206610000,206621130 Gene ID= ENSG00000114948.12 TPM= 18.11 Transcript Type= protein_coding chr2 206737763 206765547 206737763 206765547 - ENST00000374412.7@MDH1B ENST00000374412.7 protein_coding 206765250,206760901,206757237,206756898,206755009,206750934,206749020,206746287,206745622,206741054,206739593,206737763 206765547,206761013,206757371,206757040,206755505,206751075,206749183,206746426,206745673,206741104,206739661,206738511 Gene ID= ENSG00000138400.12 TPM= 1.81 Transcript Type= protein_coding chr2 206765585 206926902 206765585 206926902 + transcript5052.chr2.nnic@FASTKD2 transcript5052.chr2.nnic protein_coding 206765585,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206879383,206881770,206925922,206926273 206765747,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206879440,206881891,206926039,206926902 Gene ID= ENSG00000118246.13 TPM= 1.81 Transcript Type= NA chr2 206765357 206792509 206765357 206792509 + ENST00000236980.10@FASTKD2 ENST00000236980.10 protein_coding 206765357,206766644,206770091,206771182,206771894,206772181,206774225,206786733,206787937,206788819,206790572,206791683 206765654,206767470,206770194,206771290,206772017,206772320,206774397,206786899,206788155,206788903,206790686,206792509 Gene ID= ENSG00000118246.13 TPM= 43.47 Transcript Type= protein_coding chr2 207529892 207603431 207529892 207603431 + ENST00000432329.6@CREB1 ENST00000432329.6 protein_coding 207529892,207555628,207560226,207561119,207567463,207570179,207575272,207577505,207596914 207530134,207555749,207560372,207561160,207567563,207570321,207575454,207577655,207603431 Gene ID= ENSG00000118260.14 TPM= 4.98 Transcript Type= protein_coding chr2 207529926 207587390 207529926 207587390 + transcript5064.chr2.nnic@CREB1 transcript5064.chr2.nnic protein_coding 207529926,207555628,207560226,207561119,207567463,207570179,207575272,207577505,207584900 207530134,207555749,207560372,207561160,207567563,207570321,207575454,207577655,207587390 Gene ID= ENSG00000118260.14 TPM= 1.81 Transcript Type= NA chr2 207529912 207603431 207529912 207603431 + ENST00000353267.7@CREB1 ENST00000353267.7 protein_coding 207529912,207555628,207560226,207567463,207570179,207575272,207577505,207596914 207530134,207555749,207560372,207567563,207570321,207575454,207577655,207603431 Gene ID= ENSG00000118260.14 TPM= 8.6 Transcript Type= protein_coding chr2 207609117 207625247 207609117 207625247 - transcript5068.chr2.nic@METTL21A transcript5068.chr2.nic protein_coding 207625062,207624229,207621806,207612068,207609117 207625247,207624404,207621917,207613443,207609765 Gene ID= ENSG00000144401.14 TPM= 6.34 Transcript Type= NA chr2 207581353 207625331 207581353 207625331 - ENST00000458426.5@METTL21A ENST00000458426.5 protein_coding 207625062,207624229,207621806,207581353 207625331,207624404,207621917,207582160 Gene ID= ENSG00000144401.14 TPM= 3.62 Transcript Type= protein_coding chr2 207711686 207756174 207711686 207756174 + ENST00000295414.7@CCNYL1 ENST00000295414.7 protein_coding 207711686,207724800,207726842,207733947,207737411,207740655,207742223,207747047,207750957,207753588 207712116,207724874,207726876,207734047,207737446,207740706,207742342,207747213,207751119,207756174 Gene ID= ENSG00000163249.11 TPM= 3.62 Transcript Type= protein_coding chr2 208236227 208255133 208236227 208255133 - ENST00000345146.6@IDH1 ENST00000345146.6 protein_coding 208254939,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236227 208255133,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169 Gene ID= ENSG00000138413.13 TPM= 835.82 Transcript Type= protein_coding chr2 208236232 208254458 208236232 208254458 - ENST00000446179.5@IDH1 ENST00000446179.5 protein_coding 208254343,208253886,208251430,208248369,208245319,208243427,208241994,208239863,208239071,208236232 208254458,208253959,208251567,208248660,208245424,208243604,208242145,208240003,208239233,208237169 Gene ID= ENSG00000138413.13 TPM= 29.88 Transcript Type= protein_coding chr2 208255247 208256181 208255247 208256181 + ENST00000440574.1@IDH1-AS1 ENST00000440574.1 antisense_RNA 208255247,208255903 208255431,208256181 Gene ID= ENSG00000231908.1 TPM= 5.43 Transcript Type= antisense_RNA chr2 210002565 210021576 210002565 210021576 + ENST00000359429.10@RPE ENST00000359429.10 protein_coding 210002565,210009657,210015973,210016507,210017473,210019669 210002783,210009736,210016112,210016641,210017559,210021576 Gene ID= ENSG00000197713.14 TPM= 59.77 Transcript Type= protein_coding chr2 210096317 210171383 210096317 210171383 - transcript5114.chr2.nic@KANSL1L transcript5114.chr2.nic protein_coding 210171149,210153495,210129031,210104104,210096317 210171383,210154611,210129172,210104301,210098207 Gene ID= ENSG00000144445.16 TPM= 1.81 Transcript Type= NA chr2 210187939 210225491 210187939 210225491 - ENST00000233710.3@ACADL ENST00000233710.3 protein_coding 210225187,210220647,210217965,210216347,210210196,210205632,210204581,210203331,210195211,210192804,210187939 210225491,210220802,210218102,210216511,210210262,210205796,210204682,210203444,210195338,210192890,210189054 Gene ID= ENSG00000115361.7 TPM= 1.81 Transcript Type= protein_coding chr2 210431249 210476767 210431249 210476767 - ENST00000450366.6@LANCL1 ENST00000450366.6 protein_coding 210476620,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249 210476767,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563 Gene ID= ENSG00000115365.11 TPM= 39.55 Transcript Type= protein_coding chr2 210431249 210476757 210431249 210476757 - ENST00000441020.7@LANCL1 ENST00000441020.7 protein_coding 210476709,210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249 210476757,210476412,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563 Gene ID= ENSG00000115365.11 TPM= 25.06 Transcript Type= protein_coding chr2 210431249 210476739 210431249 210476739 - ENST00000443314.5@LANCL1 ENST00000443314.5 protein_coding 210476316,210471959,210455107,210441308,210440598,210437690,210436216,210435387,210431249 210476739,210472076,210455314,210441443,210440744,210437872,210436392,210435459,210434563 Gene ID= ENSG00000115365.11 TPM= 7.85 Transcript Type= protein_coding chr2 213284382 213370741 213284382 213370741 + transcript5123.chr2.nnic@SPAG16 transcript5123.chr2.nnic protein_coding 213284382,213296064,213297262,213310059,213317219,213340163,213350528,213364076,213368814 213284619,213296110,213297357,213310177,213317356,213340270,213350645,213364145,213370741 Gene ID= ENSG00000144451.18 TPM= 2.72 Transcript Type= NA chr2 213284392 213317978 213284392 213317978 + ENST00000432529.6@SPAG16 ENST00000432529.6 protein_coding 213284392,213296064,213297262,213310059,213317219 213284619,213296110,213297357,213310177,213317978 Gene ID= ENSG00000144451.18 TPM= 28.07 Transcript Type= protein_coding chr2 215312091 215349763 215312091 215349763 + ENST00000435675.5@ATIC ENST00000435675.5 protein_coding 215312091,215318157,215319665,215325241,215325987,215326822,215332382,215333350,215334919,215336035,215338779,215344779,215346759,215349094,215349536 215312624,215318233,215319731,215325329,215326138,215326978,215332507,215333457,215335004,215336124,215338907,215344871,215346941,215349249,215349763 Gene ID= ENSG00000138363.14 TPM= 22.64 Transcript Type= protein_coding chr2 215360864 215436068 215360864 215436068 - transcript5137.chr2.nic@FN1 transcript5137.chr2.nic protein_coding 215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215392931,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360864 215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215393203,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215372015,215370432,215368027,215365630,215364985,215362079,215361626 Gene ID= ENSG00000115414.18 TPM= 8.15 Transcript Type= NA chr2 215360864 215436030 215360864 215436030 - transcript5140.chr2.nic@FN1 transcript5140.chr2.nic protein_coding 215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215380811,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360864 215436030,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215381080,215379317,215378262,215376674,215375718,215375393,215373411,215372015,215370432,215368027,215365630,215364985,215362079,215361626 Gene ID= ENSG00000115414.18 TPM= 2.26 Transcript Type= NA chr2 215360864 215436068 215360864 215436068 - transcript5146.chr2.nic@FN1 transcript5146.chr2.nic protein_coding 215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360864 215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372300,215370432,215368027,215365630,215364985,215362079,215361626 Gene ID= ENSG00000115414.18 TPM= 4.07 Transcript Type= NA chr2 215360862 215436073 215360862 215436073 - ENST00000443816.5@FN1 ENST00000443816.5 protein_coding 215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360862 215436073,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215372015,215370432,215368027,215365630,215364985,215362079,215361626 Gene ID= ENSG00000115414.18 TPM= 24.45 Transcript Type= protein_coding chr2 215360862 215436068 215360862 215436068 - ENST00000446046.5@FN1 ENST00000446046.5 protein_coding 215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215380811,215379130,215378175,215376498,215375629,215375214,215373322,215372109,215371909,215370294,215367863,215365505,215364879,215361969,215360862 215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215381080,215379317,215378262,215376674,215375718,215375393,215373411,215372300,215372015,215370432,215368027,215365630,215364985,215362079,215361626 Gene ID= ENSG00000115414.18 TPM= 3.17 Transcript Type= protein_coding chr2 215360866 215436068 215360866 215436068 - ENST00000356005.8@FN1 ENST00000356005.8 protein_coding 215435655,215434696,215433324,215431833,215430715,215428180,215425094,215424146,215423350,215422091,215420673,215419242,215414837,215409934,215409563,215408298,215408108,215407127,215406238,215404389,215399257,215397680,215397137,215394528,215391632,215388212,215386689,215384860,215384020,215383328,215382212,215379130,215378175,215376498,215375629,215375214,215373322,215371909,215370294,215367863,215365505,215364879,215361969,215360866 215436068,215434824,215433461,215431964,215430852,215428338,215425285,215424325,215423526,215422243,215420801,215419385,215414958,215410114,215409739,215408426,215408197,215407321,215406510,215404655,215399351,215397848,215397223,215394719,215391814,215388301,215386958,215384976,215384184,215383483,215382325,215379317,215378262,215376674,215375718,215375393,215373411,215372375,215370432,215368027,215365630,215364985,215362079,215361626 Gene ID= ENSG00000115414.18 TPM= 6.79 Transcript Type= protein_coding chr2 215942585 216013339 215942585 216013339 - transcript5150.chr2.nnic@MREG transcript5150.chr2.nnic protein_coding 216013233,215996306,215947023,215945571,215944270,215942585 216013339,215996465,215947113,215945734,215944997,215943587 Gene ID= ENSG00000118242.15 TPM= 2.72 Transcript Type= NA chr2 216038409 216081816 216038409 216081816 - ENST00000265322.7@PECR ENST00000265322.7 protein_coding 216081618,216066385,216065312,216058895,216051449,216049263,216043904,216038409 216081816,216066518,216065477,216058976,216051545,216049373,216044015,216039360 Gene ID= ENSG00000115425.13 TPM= 12.68 Transcript Type= protein_coding chr2 216107464 216206303 216107464 216206303 + ENST00000392133.7@XRCC5 ENST00000392133.7 protein_coding 216107464,216107653,216109091,216113016,216116659,216117746,216119043,216122062,216125917,216127536,216130875,216132325,216137088,216138089,216141186,216148083,216160068,216161979,216190225,216192639,216194919,216204322,216205188 216107532,216107698,216109457,216113129,216116842,216117794,216119165,216122253,216126031,216127674,216130987,216132387,216137225,216138179,216141319,216148276,216160161,216162048,216190334,216192735,216194986,216204396,216206303 Gene ID= ENSG00000079246.15 TPM= 225.93 Transcript Type= protein_coding chr2 216412414 216483053 216412414 216483053 + ENST00000357276.8@SMARCAL1 ENST00000357276.8 protein_coding 216412414,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738 216412648,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483053 Gene ID= ENSG00000138375.12 TPM= 19.47 Transcript Type= protein_coding chr2 216412743 216483017 216412743 216483017 + ENST00000358207.9@SMARCAL1 ENST00000358207.9 protein_coding 216412743,216413856,216414647,216416257,216420299,216423633,216428596,216432718,216435338,216438420,216447018,216450846,216464597,216467944,216475269,216477109,216478203,216482738 216412798,216413892,216415515,216416307,216420532,216423683,216428782,216432868,216435496,216438485,216447158,216451064,216464667,216468046,216475451,216477209,216478299,216483017 Gene ID= ENSG00000138375.12 TPM= 14.94 Transcript Type= protein_coding chr2 216498189 216504086 216498189 216504086 + ENST00000491306.5@RPL37A ENST00000491306.5 protein_coding 216498189,216499270,216499949,216501341 216498877,216499398,216500031,216504086 Gene ID= ENSG00000197756.9 TPM= 466.81 Transcript Type= protein_coding chr2 216498825 216501467 216498825 216501467 + ENST00000490649.1@RPL37A ENST00000490649.1 protein_coding 216498825,216499270,216499949 216498877,216499398,216501467 Gene ID= ENSG00000197756.9 TPM= 2.72 Transcript Type= retained_intron chr2 216498867 216501467 216498867 216501467 + ENST00000359681.3@RPL37A ENST00000359681.3 protein_coding 216498867,216499949,216501341 216499398,216500031,216501467 Gene ID= ENSG00000197756.9 TPM= 34.86 Transcript Type= retained_intron chr2 216633395 216664436 216633395 216664436 + ENST00000233809.8@IGFBP2 ENST00000233809.8 protein_coding 216633395,216660557,216661858,216663940 216633965,216660786,216661998,216664436 Gene ID= ENSG00000115457.9 TPM= 532.46 Transcript Type= protein_coding chr2 216673352 216695331 216673352 216695331 - transcript5183.chr2.nnic@IGFBP5 transcript5183.chr2.nnic protein_coding 216695295,216694439,216678850,216678112,216673352 216695331,216694957,216679079,216678231,216676882 Gene ID= ENSG00000115461.4 TPM= 3.92 Transcript Type= NA chr2 216672105 216695525 216672105 216695525 - ENST00000233813.4@IGFBP5 ENST00000233813.4 protein_coding 216694439,216678850,216678112,216672105 216695525,216679079,216678231,216676882 Gene ID= ENSG00000115461.4 TPM= 406.89 Transcript Type= protein_coding chr2 217284024 217434345 217284024 217434345 - transcript5188.chr2.nic@DIRC3 transcript5188.chr2.nic protein_coding 217433948,217432923,217427391,217426591,217425302,217327997,217325846,217318920,217317966,217284024 217434345,217433021,217427473,217426786,217425522,217328152,217325970,217319177,217318201,217284863 Gene ID= ENSG00000231672.6 TPM= 4.53 Transcript Type= NA chr2 218217094 218254348 218217094 218254348 + ENST00000315717.9@ARPC2 ENST00000315717.9 protein_coding 218217094,218217463,218225920,218228738,218234352,218238664,218239391,218245420,218249364,218249821,218253891 218217254,218217544,218225954,218228850,218234397,218238850,218239484,218245546,218249464,218249921,218254348 Gene ID= ENSG00000163466.15 TPM= 326 Transcript Type= protein_coding chr2 218261015 218263859 218261015 218263859 + ENST00000522678.5@GPBAR1 ENST00000522678.5 protein_coding 218261015,218262059 218261216,218263859 Gene ID= ENSG00000179921.14 TPM= 1.81 Transcript Type= protein_coding chr2 218261015 218263859 218261015 218263859 + ENST00000519574.1@GPBAR1 ENST00000519574.1 protein_coding 218261015,218262680 218261216,218263859 Gene ID= ENSG00000179921.14 TPM= 8.15 Transcript Type= protein_coding chr2 218264123 218270257 218264123 218270257 - ENST00000248450.8@AAMP ENST00000248450.8 protein_coding 218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264123 218270257,218269534,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608 Gene ID= ENSG00000127837.9 TPM= 236.95 Transcript Type= protein_coding chr2 218264129 218270178 218264129 218270178 - ENST00000444053.5@AAMP ENST00000444053.5 protein_coding 218269966,218269382,218267494,218266847,218266443,218266064,218265831,218265579,218265371,218265020,218264129 218270178,218269537,218267613,218266986,218266587,218266147,218265946,218265682,218265461,218265174,218264608 Gene ID= ENSG00000127837.9 TPM= 40.45 Transcript Type= protein_coding chr2 218264130 218270088 218264130 218270088 - ENST00000475678.5@AAMP ENST00000475678.5 protein_coding 218269966,218269382,218267494,218266847,218265579,218265371,218265020,218264130 218270088,218269534,218267613,218266986,218266587,218265461,218265174,218264608 Gene ID= ENSG00000127837.9 TPM= 8.76 Transcript Type= retained_intron chr2 218270392 218272947 218270392 218272947 + ENST00000248451.7@PNKD ENST00000248451.7 protein_coding 218270392,218271381,218272570 218270602,218271549,218272947 Gene ID= ENSG00000127838.13 TPM= 145.34 Transcript Type= protein_coding chr2 218270519 218272947 218270519 218272947 + transcript5229.chr2.nnic@PNKD transcript5229.chr2.nnic protein_coding 218270519,218271424,218272570 218270602,218271549,218272947 Gene ID= ENSG00000127838.13 TPM= 12.22 Transcript Type= NA chr2 218270520 218272911 218270520 218272911 + ENST00000469689.1@PNKD ENST00000469689.1 protein_coding 218270520,218272570 218271549,218272911 Gene ID= ENSG00000127838.13 TPM= 4.53 Transcript Type= retained_intron chr2 218273663 218292565 218273663 218292565 - transcript5203.chr2.nic@TMBIM1 transcript5203.chr2.nic protein_coding 218292466,218285763,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218273663 218292565,218285938,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621 Gene ID= ENSG00000135926.14 TPM= 36.63 Transcript Type= NA chr2 218274192 218287306 218274192 218287306 - transcript5208.chr2.nic@TMBIM1 transcript5208.chr2.nic protein_coding 218287207,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274192 218287306,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621 Gene ID= ENSG00000135926.14 TPM= 35.72 Transcript Type= NA chr2 218274192 218292577 218274192 218292577 - ENST00000258412.7@TMBIM1 ENST00000258412.7 protein_coding 218292466,218281940,218280026,218279289,218279038,218278515,218277935,218277633,218277366,218277004,218276026,218274192 218292577,218282181,218280126,218279353,218279091,218278565,218277974,218277670,218277453,218277099,218276079,218275621 Gene ID= ENSG00000135926.14 TPM= 340.89 Transcript Type= protein_coding chr2 218323173 218346791 218323173 218346791 + ENST00000258362.7@PNKD ENST00000258362.7 protein_coding 218323173,218339783,218340029,218340728,218341534,218341981,218343500,218344455,218344808 218323431,218339898,218340141,218340786,218341626,218342144,218343586,218344570,218346791 Gene ID= ENSG00000127838.13 TPM= 31.69 Transcript Type= protein_coding chr2 218366666 218367887 218366666 218367887 - transcript5244.chr2.nnic@CATIP-AS1 transcript5244.chr2.nnic processed_transcript 218367591,218366927,218366666 218367887,218367082,218366798 Gene ID= ENSG00000225062.1 TPM= 2.72 Transcript Type= NA chr2 218382029 218396894 218382029 218396894 + ENST00000233202.10@SLC11A1 ENST00000233202.10 protein_coding 218382029,218382960,218384243,218385147,218386635,218387160,218387565,218387800,218389870,218391198,218391376,218392981,218394120,218394632,218394925 218382375,218383102,218384365,218385266,218386741,218387230,218387632,218387955,218390028,218391287,218391495,218393130,218394193,218394785,218396894 Gene ID= ENSG00000018280.16 TPM= 15.39 Transcript Type= protein_coding chr2 218398695 218405941 218398695 218405941 + transcript5246.chr2.nic@CTDSP1 transcript5246.chr2.nic protein_coding 218398695,218401564,218402114,218402349,218403035,218403232,218404297 218399129,218401712,218402215,218402405,218403127,218403417,218405941 Gene ID= ENSG00000144579.7 TPM= 21.89 Transcript Type= NA chr2 218399755 218405941 218399755 218405941 + ENST00000273062.6@CTDSP1 ENST00000273062.6 protein_coding 218399755,218401564,218402111,218402349,218403035,218403232,218404297 218400157,218401712,218402215,218402405,218403127,218403417,218405941 Gene ID= ENSG00000144579.7 TPM= 22.34 Transcript Type= protein_coding chr2 218400565 218405941 218400565 218405941 + transcript5250.chr2.nic@CTDSP1 transcript5250.chr2.nic protein_coding 218400565,218401564,218402114,218402349,218403035,218403232,218404297 218400897,218401712,218402215,218402405,218403127,218403417,218405941 Gene ID= ENSG00000144579.7 TPM= 20.98 Transcript Type= NA chr2 218450251 218568361 218450251 218568361 - ENST00000258399.7@USP37 ENST00000258399.7 protein_coding 218568178,218562673,218560820,218558498,218553553,218549809,218546919,218546221,218534609,218529956,218509979,218498026,218497734,218495760,218488304,218485664,218482070,218479650,218476840,218474630,218466010,218463306,218459790,218457092,218455580,218450251 218568361,218562813,218560883,218558677,218553724,218549909,218547091,218546298,218534706,218530040,218510140,218498157,218497857,218495950,218488421,218485743,218482234,218479715,218476981,218474885,218466176,218463366,218459905,218457161,218455718,218455017 Gene ID= ENSG00000135913.10 TPM= 4.53 Transcript Type= protein_coding chr2 218526161 218568350 218526161 218568350 - transcript5256.chr2.nnic@USP37 transcript5256.chr2.nnic protein_coding 218568178,218562673,218560820,218558498,218553553,218549809,218546919,218546221,218534609,218529956,218526161 218568350,218562813,218560883,218558677,218553724,218549909,218547091,218546298,218534706,218530040,218526726 Gene ID= ENSG00000135913.10 TPM= 1.81 Transcript Type= NA chr2 218568580 218597080 218568580 218597080 + ENST00000273064.10@CNOT9 ENST00000273064.10 protein_coding 218568580,218580561,218582971,218584612,218587586,218592304,218592616,218594108 218568978,218580740,218583086,218584721,218587695,218592402,218592707,218597080 Gene ID= ENSG00000144580.13 TPM= 7.7 Transcript Type= protein_coding chr2 218568875 218593842 218568875 218593842 + ENST00000295701.9@CNOT9 ENST00000295701.9 protein_coding 218568875,218580561,218582971,218584612,218587586,218592304,218592616,218593528 218568978,218580740,218583086,218584721,218587695,218592402,218592707,218593842 Gene ID= ENSG00000144580.13 TPM= 4.98 Transcript Type= protein_coding chr2 218659715 218663446 218659715 218663446 + transcript5265.chr2.nic@BCS1L transcript5265.chr2.nic protein_coding 218659715,218660307,218660939,218661406,218661759,218662197,218662510,218662883,218663134 218659743,218660421,218661307,218661545,218661953,218662260,218662679,218663000,218663446 Gene ID= ENSG00000074582.12 TPM= 2.26 Transcript Type= NA chr2 218659656 218663443 218659656 218663443 + ENST00000359273.7@BCS1L ENST00000359273.7 protein_coding 218659656,218660939,218661406,218661759,218662197,218662510,218662883,218663134 218659743,218661307,218661545,218661953,218662260,218662679,218663000,218663443 Gene ID= ENSG00000074582.12 TPM= 24.9 Transcript Type= protein_coding chr2 218659684 218663446 218659684 218663446 + transcript5272.chr2.nic@BCS1L transcript5272.chr2.nic protein_coding 218659684,218661406,218661759,218662197,218662510,218662883,218663134 218661307,218661520,218661953,218662260,218662679,218663000,218663446 Gene ID= ENSG00000074582.12 TPM= 3.62 Transcript Type= NA chr2 218659714 218663442 218659714 218663442 + ENST00000392110.6@BCS1L ENST00000392110.6 protein_coding 218659714,218660037,218660939,218661406,218661759,218662197,218662510,218662883,218663134 218659743,218660166,218661307,218661545,218661953,218662260,218662679,218663000,218663442 Gene ID= ENSG00000074582.12 TPM= 1.36 Transcript Type= protein_coding chr2 218659737 218663443 218659737 218663443 + ENST00000412366.5@BCS1L ENST00000412366.5 protein_coding 218659737,218660939,218661406,218661759,218662197,218662510,218662883,218663134 218659800,218661307,218661545,218661953,218662260,218662679,218663000,218663443 Gene ID= ENSG00000074582.12 TPM= 3.17 Transcript Type= protein_coding chr2 218663864 218672411 218663864 218672411 - ENST00000295704.6@RNF25 ENST00000295704.6 protein_coding 218671930,218668605,218668239,218668079,218667912,218666159,218665916,218665155,218664739,218663864 218672411,218668679,218668341,218668146,218667981,218666230,218666059,218665247,218664873,218664535 Gene ID= ENSG00000163481.7 TPM= 30.34 Transcript Type= protein_coding chr2 218663892 218671977 218663892 218671977 - ENST00000473034.5@RNF25 ENST00000473034.5 protein_coding 218671930,218668079,218667912,218666159,218665916,218665155,218664739,218663892 218671977,218668679,218667981,218666230,218666059,218665247,218664873,218664535 Gene ID= ENSG00000163481.7 TPM= 2.26 Transcript Type= retained_intron chr2 218672026 218702715 218672026 218702715 + ENST00000295709.7@STK36 ENST00000295709.7 protein_coding 218672026,218672741,218673625,218673879,218675343,218676029,218679168,218679560,218679893,218680603,218685085,218688697,218689859,218690450,218692143,218692583,218693240,218693723,218693895,218694264,218694525,218696527,218697039,218697463,218697854,218698602,218701866 218672215,218672913,218673765,218673956,218675473,218676278,218679261,218679729,218680080,218680702,218685228,218688876,218689956,218690555,218692293,218692710,218693344,218693821,218693983,218694327,218694635,218696601,218697213,218697610,218698001,218699348,218702715 Gene ID= ENSG00000163482.11 TPM= 6.34 Transcript Type= protein_coding chr2 218672069 218702709 218672069 218702709 + ENST00000392105.7@STK36 ENST00000392105.7 protein_coding 218672069,218672741,218673625,218673879,218675343,218676029,218679168,218679560,218679893,218680603,218685085,218688697,218689859,218690450,218692143,218692583,218693240,218693723,218693895,218694264,218694525,218696590,218697039,218697463,218697854,218698602,218701866 218672215,218672913,218673765,218673956,218675473,218676278,218679261,218679729,218680080,218680702,218685228,218688876,218689956,218690555,218692293,218692710,218693344,218693821,218693983,218694327,218694635,218696601,218697213,218697610,218698001,218699348,218702709 Gene ID= ENSG00000163482.11 TPM= 1.81 Transcript Type= protein_coding chr2 218672296 218702623 218672296 218702623 + ENST00000440309.5@STK36 ENST00000440309.5 protein_coding 218672296,218672741,218673625,218673879,218675343,218676029,218679168,218679560,218679893,218680603,218685085,218688697,218689859,218690450,218692143,218692583,218693240,218693723,218693895,218694264,218694525,218696527,218697039,218697463,218697854,218698602,218701866 218672365,218672913,218673765,218673956,218675473,218676278,218679261,218679729,218680080,218680702,218685228,218688876,218689956,218690555,218692293,218692710,218693344,218693821,218693983,218694327,218694635,218696601,218697213,218697610,218698001,218699348,218702623 Gene ID= ENSG00000163482.11 TPM= 2.72 Transcript Type= protein_coding chr2 218710882 218739377 218710882 218739377 + transcript5300.chr2.nic@TTLL4 transcript5300.chr2.nic protein_coding 218710882,218727269,218737579 218711037,218727347,218739377 Gene ID= ENSG00000135912.10 TPM= 1.81 Transcript Type= NA chr2 218710875 218755416 218710875 218755416 + ENST00000392102.5@TTLL4 ENST00000392102.5 protein_coding 218710875,218727269,218737579,218740058,218740521,218745109,218745691,218746155,218747003,218747290,218747597,218748105,218748836,218749253,218750009,218751704,218752763,218753115,218753584,218754134 218711037,218727347,218739163,218740167,218740584,218745233,218745801,218746231,218747194,218747372,218747725,218748227,218748934,218749387,218750146,218751806,218752973,218753185,218753669,218755416 Gene ID= ENSG00000135912.10 TPM= 8.15 Transcript Type= protein_coding chr2 218781756 218815293 218781756 218815293 + ENST00000258415.8@CYP27A1 ENST00000258415.8 protein_coding 218781756,218809577,218812222,218812552,218812924,218814021,218814380,218814545,218814911 218782437,218809767,218812421,218812749,218813096,218814187,218814458,218814757,218815293 Gene ID= ENSG00000135929.8 TPM= 347.28 Transcript Type= protein_coding chr2 219075321 219160853 219075321 219160853 - ENST00000356853.9@NHEJ1 ENST00000356853.9 protein_coding 219160720,219158186,219157472,219147657,219146680,219078089,219077246,219075321 219160853,219158362,219157684,219147795,219146738,219078206,219077364,219076455 Gene ID= ENSG00000187736.12 TPM= 15.39 Transcript Type= protein_coding chr2 219171895 219178148 219171895 219178148 - transcript5320.chr2.nnic@CNPPD1 transcript5320.chr2.nnic protein_coding 219178121,219177104,219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171895 219178148,219177313,219176847,219176331,219175672,219175108,219174906,219174207,219173467,219173128 Gene ID= ENSG00000115649.15 TPM= 8.15 Transcript Type= NA chr2 219171895 219178169 219171895 219178169 - transcript5328.chr2.nnic@CNPPD1 transcript5328.chr2.nnic protein_coding 219178121,219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171895 219178169,219176847,219176331,219175672,219175108,219174906,219174207,219173467,219173128 Gene ID= ENSG00000115649.15 TPM= 68.82 Transcript Type= NA chr2 219171897 219176966 219171897 219176966 - ENST00000360507.9@CNPPD1 ENST00000360507.9 protein_coding 219176760,219176223,219175591,219174988,219174778,219174146,219173350,219171897 219176966,219176331,219175672,219175108,219174906,219174207,219173467,219173128 Gene ID= ENSG00000115649.15 TPM= 309.7 Transcript Type= protein_coding chr2 219178199 219183723 219178199 219183723 + transcript5323.chr2.nic@RETREG2 transcript5323.chr2.nic protein_coding 219178199,219178922,219179733,219180110,219180670,219181062,219181369,219181640,219182013,219182414 219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219182308,219183723 Gene ID= ENSG00000144567.10 TPM= 35.47 Transcript Type= NA chr2 219178217 219185479 219178217 219185479 + ENST00000430297.6@RETREG2 ENST00000430297.6 protein_coding 219178217,219178922,219179733,219180110,219180670,219181062,219181369,219181640,219182013 219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219185479 Gene ID= ENSG00000144567.10 TPM= 219.59 Transcript Type= protein_coding chr2 219178227 219183492 219178227 219183492 + ENST00000273048.2@RETREG2 ENST00000273048.2 protein_coding 219178227,219178922,219179733,219180198,219180670,219181062,219181369,219181640,219182013 219178633,219179028,219179763,219180245,219180754,219181205,219181463,219181775,219183492 Gene ID= ENSG00000144567.10 TPM= 25.51 Transcript Type= nonsense_mediated_decay chr2 219206793 219209651 219206793 219209651 + ENST00000289528.9@ZFAND2B ENST00000289528.9 protein_coding 219206793,219207327,219207648,219207887,219208256,219208426,219208572,219208977,219209262 219207042,219207421,219207779,219208038,219208348,219208486,219208639,219209049,219209651 Gene ID= ENSG00000158552.12 TPM= 21.73 Transcript Type= protein_coding chr2 219209768 219218990 219209768 219218990 - ENST00000265316.7@ABCB6 ENST00000265316.7 protein_coding 219218125,219217670,219216652,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209768 219218990,219217807,219216832,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046 Gene ID= ENSG00000115657.12 TPM= 85.12 Transcript Type= protein_coding chr2 219209765 219218875 219209765 219218875 - transcript5361.chr2.nnic@ABCB6 transcript5361.chr2.nnic protein_coding 219218125,219217670,219216652,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209765 219218875,219217807,219216832,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210589,219210298,219210046 Gene ID= ENSG00000115657.12 TPM= 2.72 Transcript Type= NA chr2 219209765 219219009 219209765 219219009 - transcript5364.chr2.nic@ABCB6 transcript5364.chr2.nic protein_coding 219218125,219217670,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209765 219219009,219217807,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046 Gene ID= ENSG00000115657.12 TPM= 4.53 Transcript Type= NA chr2 219209765 219218862 219209765 219218862 - transcript5365.chr2.nic@ABCB6 transcript5365.chr2.nic protein_coding 219218125,219217670,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209765 219218862,219217807,219216832,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046 Gene ID= ENSG00000115657.12 TPM= 3.62 Transcript Type= NA chr2 219209765 219218958 219209765 219218958 - transcript5369.chr2.nnic@ABCB6 transcript5369.chr2.nnic protein_coding 219218125,219216364,219215997,219214961,219214389,219214121,219213826,219213590,219213439,219213241,219213008,219212387,219210934,219210711,219210381,219210230,219209765 219218958,219216465,219216180,219215082,219214498,219214186,219213951,219213666,219213502,219213326,219213065,219212491,219211108,219210823,219210475,219210298,219210046 Gene ID= ENSG00000115657.12 TPM= 3.62 Transcript Type= NA chr2 219219382 219229637 219219382 219229637 - transcript5379.chr2.nic@ATG9A transcript5379.chr2.nic protein_coding 219229535,219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382 219229637,219229174,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452 Gene ID= ENSG00000198925.10 TPM= 20.87 Transcript Type= NA chr2 219219382 219229363 219219382 219229363 - transcript5386.chr2.nic@ATG9A transcript5386.chr2.nic protein_coding 219229010,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382 219229363,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452 Gene ID= ENSG00000198925.10 TPM= 11.82 Transcript Type= NA chr2 219219380 219229717 219219380 219229717 - ENST00000396761.6@ATG9A ENST00000396761.6 protein_coding 219229535,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219380 219229717,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452 Gene ID= ENSG00000198925.10 TPM= 30.83 Transcript Type= protein_coding chr2 219219382 219229368 219219382 219229368 - ENST00000409618.5@ATG9A ENST00000409618.5 protein_coding 219229010,219228434,219227922,219227770,219226869,219225411,219225071,219224106,219223869,219223585,219222645,219222272,219222050,219221080,219220747,219219382 219229368,219228485,219228053,219227813,219226933,219225572,219225212,219224854,219224022,219223764,219222893,219222450,219222167,219221302,219220892,219220452 Gene ID= ENSG00000198925.10 TPM= 18.16 Transcript Type= protein_coding chr2 219229843 219236650 219229843 219236650 + transcript5398.chr2.nnic@ANKZF1 transcript5398.chr2.nnic protein_coding 219229843,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219234826,219235474,219235708,219236010,219236322 219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219234288,219235293,219235585,219235875,219236095,219236650 Gene ID= ENSG00000163516.13 TPM= 1.81 Transcript Type= NA chr2 219229757 219236669 219229757 219236669 + ENST00000323348.9@ANKZF1 ENST00000323348.9 protein_coding 219229757,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219234826,219235474,219235708,219236010,219236322 219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219234288,219235312,219235585,219235875,219236095,219236669 Gene ID= ENSG00000163516.13 TPM= 24 Transcript Type= protein_coding chr2 219229845 219236650 219229845 219236650 + transcript5408.chr2.nic@ANKZF1 transcript5408.chr2.nic protein_coding 219229845,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219235708,219236010,219236322 219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219235585,219235875,219236095,219236650 Gene ID= ENSG00000163516.13 TPM= 1.81 Transcript Type= NA chr2 219229772 219236650 219229772 219236650 + transcript5409.chr2.nic@ANKZF1 transcript5409.chr2.nic protein_coding 219229772,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219235708,219236010,219236322 219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219235585,219235875,219236095,219236650 Gene ID= ENSG00000163516.13 TPM= 6.34 Transcript Type= NA chr2 219229772 219236650 219229772 219236650 + transcript5411.chr2.nic@ANKZF1 transcript5411.chr2.nic protein_coding 219229772,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219236010,219236322 219229900,219230405,219232040,219232362,219232683,219233191,219233433,219233943,219235875,219236095,219236650 Gene ID= ENSG00000163516.13 TPM= 6.34 Transcript Type= NA chr2 219229844 219236650 219229844 219236650 + transcript5412.chr2.nic@ANKZF1 transcript5412.chr2.nic protein_coding 219229844,219230228,219231928,219232260,219232490,219233286,219233715,219234133,219236010,219236322 219229900,219230350,219232040,219232362,219233191,219233433,219233943,219235875,219236095,219236650 Gene ID= ENSG00000163516.13 TPM= 1.81 Transcript Type= NA chr2 219229838 219236651 219229838 219236651 + ENST00000463792.5@ANKZF1 ENST00000463792.5 protein_coding 219229838,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219236010,219236322 219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219235875,219236095,219236651 Gene ID= ENSG00000163516.13 TPM= 5.43 Transcript Type= retained_intron chr2 219229827 219236618 219229827 219236618 + ENST00000477479.5@ANKZF1 ENST00000477479.5 protein_coding 219229827,219230228,219231928,219232260,219232490,219233079,219233286,219233715,219234133,219235474,219235708,219236010,219236322 219229900,219230350,219232040,219232362,219232683,219233191,219233433,219233943,219235312,219235585,219235875,219236095,219236618 Gene ID= ENSG00000163516.13 TPM= 1.81 Transcript Type= retained_intron chr2 219236606 219245472 219236606 219245472 - ENST00000295759.11@GLB1L ENST00000295759.11 protein_coding 219245229,219243502,219243148,219242768,219242514,219240191,219239920,219239775,219239561,219239411,219239092,219238705,219238495,219238250,219237826,219237512,219236606 219245472,219243643,219243314,219242918,219242574,219240285,219240094,219239833,219239682,219239451,219239210,219238779,219238584,219238363,219237957,219237727,219237347 Gene ID= ENSG00000163521.15 TPM= 8.15 Transcript Type= protein_coding chr2 219245455 219250337 219245455 219250337 + ENST00000409638.7@STK16 ENST00000409638.7 protein_coding 219245455,219245896,219246657,219247113,219247415,219247662,219248193,219248421 219245522,219246085,219246876,219247246,219247535,219247757,219248314,219250337 Gene ID= ENSG00000115661.13 TPM= 6.34 Transcript Type= protein_coding chr2 219245479 219248892 219245479 219248892 + ENST00000396738.6@STK16 ENST00000396738.6 protein_coding 219245479,219245896,219246657,219247113,219247415,219247662,219248193,219248421 219245796,219246085,219246876,219247246,219247535,219247757,219248314,219248892 Gene ID= ENSG00000115661.13 TPM= 1.81 Transcript Type= protein_coding chr2 219245463 219248910 219245463 219248910 + transcript5421.chr2.nic@STK16 transcript5421.chr2.nic protein_coding 219245463,219245896,219246657,219247415,219247662,219248193,219248421 219245522,219246085,219246876,219247535,219247757,219248314,219248910 Gene ID= ENSG00000115661.13 TPM= 2.72 Transcript Type= NA chr2 219249711 219254032 219249711 219254032 - ENST00000248437.8@TUBA4A ENST00000248437.8 protein_coding 219253856,219252008,219251565,219249711 219254032,219252230,219251713,219251323 Gene ID= ENSG00000127824.13 TPM= 19.47 Transcript Type= protein_coding chr2 219250281 219254716 219250281 219254716 - transcript5428.chr2.nnic@TUBA4A transcript5428.chr2.nnic protein_coding 219254220,219252008,219251565,219250281 219254716,219252230,219251713,219251323 Gene ID= ENSG00000127824.13 TPM= 6.79 Transcript Type= NA chr2 219279344 219286898 219279344 219286898 + ENST00000392086.8@DNAJB2 ENST00000392086.8 protein_coding 219279344,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632,219285987 219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219284835,219286898 Gene ID= ENSG00000135924.15 TPM= 50.71 Transcript Type= protein_coding chr2 219279267 219286900 219279267 219286900 + ENST00000336576.9@DNAJB2 ENST00000336576.9 protein_coding 219279267,219279798,219280578,219281718,219281939,219282837,219283133,219283419,219284632 219279518,219279898,219280687,219281771,219282061,219282929,219283235,219283489,219286900 Gene ID= ENSG00000135924.15 TPM= 4.53 Transcript Type= protein_coding chr2 219372035 219387373 219372035 219387373 - transcript5444.chr2.nic@DNPEP transcript5444.chr2.nic protein_coding 219387278,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219372035 219387373,219387163,219386980,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342 Gene ID= ENSG00000123992.18 TPM= 8.3 Transcript Type= NA chr2 219374196 219387929 219374196 219387929 - ENST00000373963.5@DNPEP ENST00000373963.5 protein_coding 219387759,219387070,219386892,219386665,219386286,219385968,219385631,219385424,219384366,219383131,219381979,219381545,219381335,219374855,219374196 219387929,219387163,219386948,219386778,219386411,219386098,219385706,219385531,219384443,219383214,219382139,219381584,219381436,219375022,219374342 Gene ID= ENSG00000123992.18 TPM= 11.02 Transcript Type= nonsense_mediated_decay chr2 219418377 219426739 219418377 219426739 + ENST00000373960.3@DES ENST00000373960.3 protein_coding 219418377,219420095,219420251,219420495,219420828,219421340,219423777,219425663,219425949 219419040,219420155,219420346,219420656,219420953,219421560,219423820,219425745,219426739 Gene ID= ENSG00000175084.11 TPM= 12.68 Transcript Type= protein_coding chr2 219498894 219506988 219498894 219506988 + transcript5457.chr2.nic@GMPPA transcript5457.chr2.nic protein_coding 219498894,219499956,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698 219499254,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506988 Gene ID= ENSG00000144591.18 TPM= 2.34 Transcript Type= NA chr2 219498901 219506989 219498901 219506989 + ENST00000358215.8@GMPPA ENST00000358215.8 protein_coding 219498901,219499961,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698 219499254,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506989 Gene ID= ENSG00000144591.18 TPM= 4.15 Transcript Type= protein_coding chr2 219498906 219506988 219498906 219506988 + ENST00000373908.5@GMPPA ENST00000373908.5 protein_coding 219498906,219499961,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698 219498938,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506988 Gene ID= ENSG00000144591.18 TPM= 1.43 Transcript Type= protein_coding chr2 219498915 219506987 219498915 219506987 + ENST00000341142.7@GMPPA ENST00000341142.7 protein_coding 219498915,219499961,219500121,219501476,219501851,219502382,219504083,219505228,219505458,219505715,219505980,219506254,219506698 219498971,219500015,219500218,219501579,219502037,219502441,219504213,219505362,219505555,219505761,219506072,219506422,219506987 Gene ID= ENSG00000144591.18 TPM= 1.13 Transcript Type= protein_coding chr2 219538947 219543930 219538947 219543930 - transcript5510.chr2.nic@CHPF transcript5510.chr2.nic protein_coding 219543225,219540946,219538947 219543930,219542189,219540642 Gene ID= ENSG00000123989.13 TPM= 13.58 Transcript Type= NA chr2 219538947 219543787 219538947 219543787 - ENST00000243776.10@CHPF ENST00000243776.10 protein_coding 219543225,219541616,219540946,219538947 219543787,219542189,219541125,219540642 Gene ID= ENSG00000123989.13 TPM= 229.1 Transcript Type= protein_coding chr2 219541460 219543573 219541460 219543573 - ENST00000373891.2@CHPF ENST00000373891.2 protein_coding 219543225,219541460 219543573,219542189 Gene ID= ENSG00000123989.13 TPM= 3.62 Transcript Type= protein_coding chr2 219543176 219550593 219543176 219550593 + transcript5501.chr2.nic@TMEM198 transcript5501.chr2.nic protein_coding 219543176,219544724,219547506,219549152,219549717 219544377,219544893,219548081,219549354,219550593 Gene ID= ENSG00000188760.10 TPM= 7.24 Transcript Type= NA chr2 219544023 219550595 219544023 219550595 + ENST00000373883.3@TMEM198 ENST00000373883.3 protein_coding 219544023,219544689,219547506,219549152,219549717 219544377,219544893,219548081,219549354,219550595 Gene ID= ENSG00000188760.10 TPM= 10.87 Transcript Type= protein_coding chr2 219555150 219572061 219555150 219572061 - transcript5469.chr2.nic@OBSL1 transcript5469.chr2.nic protein_coding 219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219556454,219555150 219572061,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219556723,219556292 Gene ID= ENSG00000124006.14 TPM= 23.09 Transcript Type= NA chr2 219555156 219571535 219555156 219571535 - transcript5471.chr2.nic@OBSL1 transcript5471.chr2.nic protein_coding 219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219555156 219571535,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219556723 Gene ID= ENSG00000124006.14 TPM= 9.06 Transcript Type= NA chr2 219555166 219571289 219555166 219571289 - ENST00000603926.5@OBSL1 ENST00000603926.5 protein_coding 219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219559225,219558184,219557823,219557343,219556454,219555166 219571289,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219559497,219558459,219558110,219557618,219556723,219556292 Gene ID= ENSG00000124006.14 TPM= 7.24 Transcript Type= protein_coding chr2 219561722 219571289 219561722 219571289 - ENST00000373873.8@OBSL1 ENST00000373873.8 protein_coding 219570221,219568055,219567718,219567273,219566830,219565242,219563355,219562402,219561722 219571289,219568324,219567969,219567575,219567126,219565514,219563627,219562674,219562008 Gene ID= ENSG00000124006.14 TPM= 55.24 Transcript Type= protein_coding chr2 219572195 219575713 219572195 219575713 + ENST00000243786.2@INHA ENST00000243786.2 protein_coding 219572195,219574694 219572642,219575713 Gene ID= ENSG00000123999.4 TPM= 124.06 Transcript Type= protein_coding chr2 219598193 219616452 219598193 219616452 + transcript5524.chr2.nnic@STK11IP transcript5524.chr2.nnic protein_coding 219598193,219601235,219601641,219601988,219602468,219602705,219605608,219605956,219606195,219606476,219606712,219607053,219608047,219608583,219609097,219609363,219611604,219611955,219613128,219613752,219614161,219614476,219615094,219616044 219598322,219601440,219601715,219602083,219602575,219602776,219605734,219606059,219606290,219606517,219606858,219607137,219608430,219608788,219609213,219609540,219611834,219612058,219613225,219613930,219614242,219614546,219615341,219616452 Gene ID= ENSG00000144589.21 TPM= 4.53 Transcript Type= NA chr2 219597860 219616451 219597860 219616451 + ENST00000456909.5@STK11IP ENST00000456909.5 protein_coding 219597860,219598094,219601235,219601641,219601988,219602468,219602705,219605608,219605956,219606195,219606476,219606712,219607053,219608047,219608583,219609097,219609363,219611604,219611955,219613128,219613752,219614161,219614476,219615094,219616044 219597923,219598180,219601440,219601715,219602083,219602575,219602776,219605734,219606059,219606290,219606517,219606858,219607137,219608430,219608788,219609213,219609540,219611834,219612058,219613225,219613930,219614242,219614546,219615341,219616451 Gene ID= ENSG00000144589.21 TPM= 19.92 Transcript Type= protein_coding chr2 219627539 219641979 219627539 219641979 + transcript5535.chr2.nic@SLC4A3 transcript5535.chr2.nic protein_coding 219627539,219627900,219628405,219629144,219629580,219630153,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651 219627745,219628043,219628766,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641979 Gene ID= ENSG00000114923.16 TPM= 19.7 Transcript Type= NA chr2 219627521 219641979 219627521 219641979 + transcript5539.chr2.nic@SLC4A3 transcript5539.chr2.nic protein_coding 219627521,219627960,219628405,219629144,219629580,219630153,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651 219627745,219628043,219628766,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641979 Gene ID= ENSG00000114923.16 TPM= 10.64 Transcript Type= NA chr2 219627806 219641979 219627806 219641979 + transcript5543.chr2.nic@SLC4A3 transcript5543.chr2.nic protein_coding 219627806,219628405,219629580,219630153,219631968,219632262,219632874,219633274,219633855,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651 219628043,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641979 Gene ID= ENSG00000114923.16 TPM= 4.75 Transcript Type= NA chr2 219627661 219641980 219627661 219641980 + ENST00000317151.7@SLC4A3 ENST00000317151.7 protein_coding 219627661,219627960,219628405,219629144,219629580,219630153,219631968,219632262,219632874,219633274,219633880,219634420,219635271,219635673,219636302,219636680,219637581,219638164,219638703,219639482,219640430,219640789,219641651 219627745,219628043,219628570,219629421,219629695,219630352,219632116,219632442,219633009,219633457,219633979,219634604,219635496,219635891,219636450,219636874,219637811,219638253,219638869,219639735,219640599,219640962,219641980 Gene ID= ENSG00000114923.16 TPM= 8.38 Transcript Type= protein_coding chr2 222319265 222355652 222319265 222355652 + transcript5546.chr2.nnic@AC010980.1 transcript5546.chr2.nnic transcribed_unprocessed_pseudogene 222319265,222342192,222352980,222353906 222319370,222342693,222353012,222355652 Gene ID= ENSG00000237732.9 TPM= 2.72 Transcript Type= NA chr2 222318471 222321722 222318471 222321722 + ENST00000555502.5@AC010980.1 ENST00000555502.5 transcribed_unprocessed_pseudogene 222318471,222321467 222319370,222321722 Gene ID= ENSG00000237732.9 TPM= 6.34 Transcript Type= processed_transcript chr2 222424423 222562620 222424423 222562620 + transcript5554.chr2.nnic@SGPP2 transcript5554.chr2.nnic protein_coding 222424423,222474568,222521767,222524944,222558347,222560992 222424821,222474726,222521946,222525033,222559532,222562620 Gene ID= ENSG00000163082.9 TPM= 4.53 Transcript Type= NA chr2 222571745 222656098 222571745 222656098 - transcript5558.chr2.nnic@FARSB transcript5558.chr2.nnic protein_coding 222656016,222648740,222646801,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222571745 222656098,222648795,222646996,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022 Gene ID= ENSG00000116120.9 TPM= 4.53 Transcript Type= NA chr2 222570536 222656337 222570536 222656337 - ENST00000281828.6@FARSB ENST00000281828.6 protein_coding 222656016,222648740,222642851,222640862,222639580,222634391,222633199,222631604,222630113,222628837,222624714,222624272,222623650,222619645,222613811,222599928,222570536 222656337,222648795,222643005,222640931,222639695,222634541,222633307,222631674,222630174,222628888,222624775,222624479,222623730,222619737,222613928,222600083,222572022 Gene ID= ENSG00000116120.9 TPM= 27.17 Transcript Type= protein_coding chr2 222860934 222944639 222860934 222944639 + ENST00000357430.7@ACSL3 ENST00000357430.7 protein_coding 222860934,222887830,222900674,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497 222861258,222887888,222900780,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222944639 Gene ID= ENSG00000123983.13 TPM= 38.78 Transcript Type= protein_coding chr2 222860942 222942222 222860942 222942222 + ENST00000392066.7@ACSL3 ENST00000392066.7 protein_coding 222860942,222887830,222908733,222916319,222918046,222919064,222921280,222922708,222923078,222924456,222927017,222928862,222930621,222933166,222934530,222941497 222861258,222887888,222909150,222916496,222918155,222919202,222921430,222922831,222923149,222924595,222927189,222928936,222930812,222933280,222934687,222942222 Gene ID= ENSG00000123983.13 TPM= 37.43 Transcript Type= protein_coding chr2 223051814 223055637 223051814 223055637 + ENST00000281830.3@KCNE4 ENST00000281830.3 protein_coding 223051814,223052808 223052274,223055637 Gene ID= ENSG00000152049.6 TPM= 3.62 Transcript Type= protein_coding chr2 223596940 223602503 223596940 223602503 - ENST00000305409.2@SCG2 ENST00000305409.2 protein_coding 223602285,223596940 223602503,223599296 Gene ID= ENSG00000171951.4 TPM= 4.53 Transcript Type= protein_coding chr2 223875347 223945387 223875347 223945387 - ENST00000233055.8@WDFY1 ENST00000233055.8 protein_coding 223945148,223917943,223912253,223905947,223901183,223898958,223895504,223894234,223884648,223881942,223880124,223875347 223945387,223918010,223912326,223906001,223901333,223899070,223895630,223894339,223884749,223882072,223880232,223878730 Gene ID= ENSG00000085449.14 TPM= 20.83 Transcript Type= protein_coding chr2 223957404 223967714 223957404 223967714 + ENST00000258383.3@MRPL44 ENST00000258383.3 protein_coding 223957404,223959534,223963756,223966863 223957651,223960002,223963934,223967714 Gene ID= ENSG00000135900.3 TPM= 74.25 Transcript Type= protein_coding chr2 223975112 224039319 223975112 224039319 - ENST00000258405.8@SERPINE2 ENST00000258405.8 protein_coding 224039099,224001642,223998115,223991803,223984752,223982681,223980311,223977544,223975112 224039319,224001922,223998342,223992000,223984950,223982781,223980400,223977627,223975904 Gene ID= ENSG00000135919.12 TPM= 11.77 Transcript Type= protein_coding chr2 223975112 224039288 223975112 224039288 - ENST00000409304.5@SERPINE2 ENST00000409304.5 protein_coding 224039099,224001642,223998115,223991803,223984752,223982681,223980311,223977544,223975112 224039288,224001922,223998342,223992000,223984950,223982781,223980397,223977627,223975904 Gene ID= ENSG00000135919.12 TPM= 9.96 Transcript Type= protein_coding chr2 224470150 224585397 224470150 224585397 - ENST00000344951.8@CUL3 ENST00000344951.8 protein_coding 224584944,224535528,224514612,224513524,224511354,224506858,224505956,224503652,224502965,224500363,224497753,224495832,224481892,224478200,224470150 224585397,224535641,224514772,224513638,224511582,224507003,224506132,224503822,224503072,224500487,224497849,224495966,224482078,224478345,224474376 Gene ID= ENSG00000036257.12 TPM= 4.83 Transcript Type= protein_coding chr2 224765090 225042442 224765090 225042442 - ENST00000258390.11@DOCK10 ENST00000258390.11 protein_coding 225042252,224931549,224916695,224896295,224886459,224886063,224885671,224876038,224874666,224874266,224873996,224864866,224864553,224862664,224856860,224854963,224852935,224852377,224849507,224845519,224845203,224844753,224841804,224839954,224837762,224834150,224830541,224823501,224819446,224816617,224814320,224807911,224807668,224806126,224805408,224805206,224805058,224804794,224804112,224801916,224800151,224797832,224796964,224796316,224794879,224793400,224792974,224789064,224787275,224787022,224778138,224774905,224773157,224770545,224770211,224765090 225042442,224931668,224916784,224896377,224886531,224886185,224885805,224876221,224874751,224874349,224874151,224865087,224864675,224862746,224856982,224855042,224853122,224852442,224849599,224845642,224845324,224844839,224841896,224840072,224837831,224834263,224830612,224823647,224819529,224816713,224814364,224808086,224807784,224806237,224805529,224805320,224805124,224804841,224804213,224802040,224800263,224797969,224797146,224796426,224795094,224793457,224793072,224789170,224787397,224787135,224778284,224775115,224773347,224770645,224770349,224765837 Gene ID= ENSG00000135905.18 TPM= 1.81 Transcript Type= protein_coding chr2 226731317 226799759 226731317 226799759 - ENST00000305123.5@IRS1 ENST00000305123.5 protein_coding 226794989,226731317 226799759,226736250 Gene ID= ENSG00000169047.5 TPM= 63.39 Transcript Type= protein_coding chr2 226792138 226795246 226792138 226795246 - ENST00000498335.1@IRS1 ENST00000498335.1 protein_coding 226794989,226792138 226795246,226792385 Gene ID= ENSG00000169047.5 TPM= 1.81 Transcript Type= processed_transcript chr2 226796216 226810540 226796216 226810540 + transcript5594.chr2.nnic@AC010735.2 transcript5594.chr2.nnic lincRNA 226796216,226807486,226808389,226809226 226796559,226807625,226808637,226810540 Gene ID= ENSG00000272622.1 TPM= 2.72 Transcript Type= NA chr2 226796216 226813764 226796216 226813764 + transcript5595.chr2.nnic@AC010735.2 transcript5595.chr2.nnic lincRNA 226796216,226807486,226808389,226810912 226796559,226807625,226808637,226813764 Gene ID= ENSG00000272622.1 TPM= 5.43 Transcript Type= NA chr2 226835955 226999201 226835955 226999201 + ENST00000392062.6@RHBDD1 ENST00000392062.6 protein_coding 226835955,226838073,226839409,226864604,226867186,226906793,226908822,226914208,226995431 226836087,226838154,226839627,226865126,226867318,226906881,226908878,226914351,226999201 Gene ID= ENSG00000144468.16 TPM= 3.78 Transcript Type= protein_coding chr2 226836065 226999201 226836065 226999201 + transcript5624.chr2.nic@RHBDD1 transcript5624.chr2.nic protein_coding 226836065,226838073,226839409,226864604,226867186,226906793,226908822,226914208,226995431 226837770,226838154,226839627,226865126,226867318,226906881,226908878,226914351,226999201 Gene ID= ENSG00000144468.16 TPM= 4.68 Transcript Type= NA chr2 226835936 226999215 226835936 226999215 + ENST00000341329.7@RHBDD1 ENST00000341329.7 protein_coding 226835936,226864604,226867186,226906793,226908822,226914208,226995431 226836087,226865126,226867318,226906881,226908878,226914351,226999215 Gene ID= ENSG00000144468.16 TPM= 12.38 Transcript Type= protein_coding chr2 227009828 227164231 227009828 227164231 - transcript5603.chr2.nic@COL4A4 transcript5603.chr2.nic protein_coding 227164007,227147413,227144516,227140161,227121014,227119895,227118645,227114628,227111678,227109224,227108833,227108581,227103972,227103144,227102789,227101865,227101504,227099620,227098694,227094125,227089868,227088653,227082115,227080443,227077894,227062530,227060136,227059405,227057439,227055945,227054594,227052305,227050977,227050068,227047475,227043077,227042148,227033410,227032148,227031945,227030443,227027902,227025802,227022048,227012181,227009828 227164231,227147584,227144558,227140238,227121148,227119939,227118761,227114696,227111713,227109286,227108868,227108622,227104052,227103197,227102848,227101909,227101557,227099689,227098798,227094289,227089957,227088816,227082187,227080549,227078077,227062598,227060243,227059623,227057600,227056115,227054737,227052412,227051158,227050131,227047549,227043184,227042255,227033481,227032276,227032055,227030598,227028009,227025810,227022173,227012297,227010501 Gene ID= ENSG00000081052.11 TPM= 4.53 Transcript Type= NA chr2 227009828 227164509 227009828 227164509 - transcript5604.chr2.nnic@COL4A4 transcript5604.chr2.nnic protein_coding 227164396,227147413,227144516,227140161,227121014,227119895,227118645,227114628,227111678,227109224,227108833,227108581,227103972,227103144,227102789,227101865,227101504,227099620,227098694,227094125,227089868,227088653,227082115,227080443,227077894,227062530,227060136,227059405,227057439,227055945,227054594,227052305,227050977,227050068,227047475,227043077,227042148,227033410,227032148,227031945,227030443,227027902,227025802,227022048,227012181,227009828 227164509,227147584,227144558,227140238,227121148,227119939,227118761,227114696,227111713,227109286,227108868,227108622,227104052,227103197,227102848,227101909,227101557,227099689,227098798,227094289,227089957,227088816,227082187,227080549,227078077,227062598,227060243,227059623,227057600,227056115,227054737,227052412,227051158,227050131,227047549,227043184,227042255,227033481,227032276,227032055,227030598,227028009,227025810,227022173,227012297,227010501 Gene ID= ENSG00000081052.11 TPM= 3.62 Transcript Type= NA chr2 227164542 227304777 227164542 227304777 + transcript5605.chr2.nic@COL4A3 transcript5605.chr2.nic protein_coding 227164542,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949,227276385,227277449,227279793,227280440,227280893,227282365,227283767,227284211,227289150,227289999,227290747,227293191,227294490,227294964,227295269,227297674,227298682,227303038,227303859,227304019 227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227273117,227276477,227277553,227279890,227280590,227281006,227282532,227283856,227284345,227289248,227290088,227290886,227293317,227294570,227295062,227295316,227297859,227298812,227303110,227303930,227304777 Gene ID= ENSG00000169031.18 TPM= 4.53 Transcript Type= NA chr2 227164624 227304330 227164624 227304330 + transcript5609.chr2.nnic@COL4A3 transcript5609.chr2.nnic protein_coding 227164624,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949,227276385,227279793,227280440,227280893,227282365,227283767,227284211,227289150,227289999,227290747,227293191,227294490,227294964,227295269,227297674,227298682,227303038,227303859,227304019 227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227273117,227276477,227279890,227280590,227281006,227282532,227283856,227284345,227289248,227290088,227290886,227293317,227294570,227295062,227295316,227297859,227298812,227303110,227303930,227304330 Gene ID= ENSG00000169031.18 TPM= 1.81 Transcript Type= NA chr2 227164542 227274486 227164542 227274486 + transcript5614.chr2.nic@COL4A3 transcript5614.chr2.nic protein_coding 227164542,227237968,227240143,227244320,227244951,227245954,227246685,227247558,227248443,227251140,227251336,227253296,227253561,227254112,227254656,227256026,227256343,227257603,227259793,227261082,227263780,227266417,227266993,227269910,227270770,227272949 227164813,227238024,227240232,227244364,227244995,227246016,227246738,227247584,227248520,227251202,227251371,227253337,227253638,227254174,227254715,227256070,227256396,227257644,227259877,227261117,227263944,227266509,227267088,227269980,227270952,227274486 Gene ID= ENSG00000169031.18 TPM= 12.68 Transcript Type= NA chr2 227325234 227357828 227325234 227357828 + transcript5620.chr2.nic@MFF transcript5620.chr2.nic protein_coding 227325234,227328678,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986 227325427,227328789,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357828 Gene ID= ENSG00000168958.19 TPM= 8.33 Transcript Type= NA chr2 227325232 227357827 227325232 227357827 + transcript5628.chr2.nic@MFF transcript5628.chr2.nic protein_coding 227325232,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986 227325427,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357827 Gene ID= ENSG00000168958.19 TPM= 4.71 Transcript Type= NA chr2 227325232 227357835 227325232 227357835 + transcript5637.chr2.nic@MFF transcript5637.chr2.nic protein_coding 227325232,227330626,227332419,227340292,227347226,227352514,227355677,227356986 227325427,227330846,227332588,227340380,227347384,227352573,227355761,227357835 Gene ID= ENSG00000168958.19 TPM= 12.86 Transcript Type= NA chr2 227325253 227357836 227325253 227357836 + transcript5652.chr2.nic@MFF transcript5652.chr2.nic protein_coding 227325253,227332419,227340292,227347226,227352514,227355677,227356986 227325427,227332588,227340380,227347384,227352573,227355761,227357836 Gene ID= ENSG00000168958.19 TPM= 17.39 Transcript Type= NA chr2 227325268 227357833 227325268 227357833 + ENST00000337110.11@MFF ENST00000337110.11 protein_coding 227325268,227328678,227330626,227332419,227340292,227342745,227355677,227356986 227325427,227328789,227330846,227332588,227340380,227342819,227355761,227357833 Gene ID= ENSG00000168958.19 TPM= 2.72 Transcript Type= protein_coding chr2 227325250 227357215 227325250 227357215 + ENST00000354503.10@MFF ENST00000354503.10 protein_coding 227325250,227328678,227330626,227332419,227340292,227355677,227356986 227325427,227328789,227330846,227332588,227340380,227355761,227357215 Gene ID= ENSG00000168958.19 TPM= 2.72 Transcript Type= protein_coding chr2 227325276 227357812 227325276 227357812 + ENST00000349901.11@MFF ENST00000349901.11 protein_coding 227325276,227328678,227330626,227332419,227340292,227352514,227355677,227356986 227325427,227328789,227330846,227332588,227340380,227352573,227355761,227357812 Gene ID= ENSG00000168958.19 TPM= 4.53 Transcript Type= protein_coding chr2 227325239 227357833 227325239 227357833 + ENST00000353339.7@MFF ENST00000353339.7 protein_coding 227325239,227328678,227329606,227330626,227332419,227340292,227342745,227347226,227352514,227355677,227356986 227325427,227328789,227329783,227330846,227332588,227340380,227342819,227347384,227352573,227355761,227357833 Gene ID= ENSG00000168958.19 TPM= 1.99 Transcript Type= protein_coding chr2 227325259 227357799 227325259 227357799 + ENST00000409565.5@MFF ENST00000409565.5 protein_coding 227325259,227330626,227332419,227340292,227355677,227356986 227325427,227330846,227332588,227340380,227355761,227357799 Gene ID= ENSG00000168958.19 TPM= 4.53 Transcript Type= protein_coding chr2 227472135 227561208 227472135 227561208 + transcript5657.chr2.nic@AGFG1 transcript5657.chr2.nic protein_coding 227472135,227491547,227519948,227523763,227524762,227531091,227533549,227534845,227536625,227536901,227550059,227551959,227553704,227554436 227472588,227491640,227520063,227523925,227524915,227531210,227533758,227535025,227536704,227536993,227550106,227552117,227553795,227561208 Gene ID= ENSG00000173744.17 TPM= 3.62 Transcript Type= NA chr2 228483265 228611381 228483265 228611381 - transcript5669.chr2.nnic@LINC01807 transcript5669.chr2.nnic lincRNA 228611252,228568254,228488683,228483265 228611381,228568372,228488793,228483498 Gene ID= ENSG00000232023.2 TPM= 4.07 Transcript Type= NA chr2 228480778 228611452 228480778 228611452 - transcript5671.chr2.nnic@LINC01807 transcript5671.chr2.nnic lincRNA 228611252,228488683,228480778 228611452,228488793,228483498 Gene ID= ENSG00000232023.2 TPM= 46.64 Transcript Type= NA chr2 229023975 229271284 229023975 229271284 - transcript5674.chr2.nnic@PID1 transcript5674.chr2.nnic protein_coding 229271014,229155818,229025257,229023975 229271284,229155964,229026108,229024925 Gene ID= ENSG00000153823.18 TPM= 4.23 Transcript Type= NA chr2 229023995 229271285 229023995 229271285 - ENST00000392055.7@PID1 ENST00000392055.7 protein_coding 229271014,229155818,229023995 229271285,229155964,229026108 Gene ID= ENSG00000153823.18 TPM= 66.71 Transcript Type= protein_coding chr2 229023974 229271265 229023974 229271265 - ENST00000392054.7@PID1 ENST00000392054.7 protein_coding 229271014,229262683,229155818,229023974 229271265,229262893,229155964,229026108 Gene ID= ENSG00000153823.18 TPM= 5.13 Transcript Type= protein_coding chr2 229357629 229714558 229357629 229714558 - ENST00000341772.4@DNER ENST00000341772.4 protein_coding 229714148,229591580,229588394,229585858,229546947,229512783,229477140,229447316,229418108,229407232,229388265,229366873,229357629 229714558,229591888,229588488,229586024,229547092,229512936,229477253,229447540,229418230,229407345,229388396,229367119,229358651 Gene ID= ENSG00000187957.7 TPM= 805.94 Transcript Type= protein_coding chr2 229767214 229921955 229767214 229921955 - transcript5702.chr2.nnic@TRIP12 transcript5702.chr2.nnic protein_coding 229921880,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767214 229921955,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793130,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750 Gene ID= ENSG00000153827.13 TPM= 2.26 Transcript Type= NA chr2 229767213 229921777 229767213 229921777 - transcript5705.chr2.nic@TRIP12 transcript5705.chr2.nic protein_coding 229921564,229879982,229860406,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767213 229921777,229880128,229860531,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750 Gene ID= ENSG00000153827.13 TPM= 2.72 Transcript Type= NA chr2 229767214 229922061 229767214 229922061 - transcript5710.chr2.nnic@TRIP12 transcript5710.chr2.nnic protein_coding 229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767214 229922061,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793130,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750 Gene ID= ENSG00000153827.13 TPM= 3.47 Transcript Type= NA chr2 229767214 229922061 229767214 229922061 - transcript5711.chr2.nic@TRIP12 transcript5711.chr2.nic protein_coding 229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767214 229922061,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805802,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750 Gene ID= ENSG00000153827.13 TPM= 2.11 Transcript Type= NA chr2 229767214 229921777 229767214 229921777 - transcript5713.chr2.nic@TRIP12 transcript5713.chr2.nic protein_coding 229921564,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229767214 229921777,229880128,229859574,229840927,229836984,229830839,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805883,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750 Gene ID= ENSG00000153827.13 TPM= 2.26 Transcript Type= NA chr2 229763838 229922009 229763838 229922009 - ENST00000283943.9@TRIP12 ENST00000283943.9 protein_coding 229921880,229879982,229858772,229840822,229836848,229830756,229829193,229818364,229815273,229815099,229814233,229813870,229811136,229810880,229808252,229807708,229805730,229803999,229803571,229802252,229799283,229798875,229797690,229796591,229795179,229792973,229792153,229791866,229791124,229789611,229788798,229787505,229785757,229778876,229778433,229777315,229774097,229771519,229769231,229768616,229763838 229922009,229880128,229859574,229840927,229836984,229830821,229829288,229818512,229815308,229815194,229814325,229814031,229811204,229811045,229808369,229807864,229805802,229804227,229803689,229802459,229799383,229799049,229797831,229796782,229795330,229793145,229792226,229792065,229791251,229789762,229788940,229787661,229785855,229778990,229778587,229777479,229774261,229771632,229769325,229768719,229767750 Gene ID= ENSG00000153827.13 TPM= 11.77 Transcript Type= protein_coding chr2 229922487 230013240 229922487 230013240 + transcript5718.chr2.nnic@FBXO36 transcript5718.chr2.nnic protein_coding 229922487,229976241,229992180,229996751,230010696 229922609,229976349,229992280,229996923,230013240 Gene ID= ENSG00000153832.11 TPM= 3.17 Transcript Type= NA chr2 229922496 230013109 229922496 230013109 + ENST00000283946.7@FBXO36 ENST00000283946.7 protein_coding 229922496,229976241,229996751,230010696 229922609,229976349,229996923,230013109 Gene ID= ENSG00000153832.11 TPM= 8.6 Transcript Type= protein_coding chr2 230034974 230068999 230034974 230068999 - ENST00000295190.8@SLC16A14 ENST00000295190.8 protein_coding 230068555,230059094,230049761,230045745,230034974 230068999,230059366,230049904,230046722,230037531 Gene ID= ENSG00000163053.10 TPM= 9.06 Transcript Type= protein_coding chr2 230045657 230068907 230045657 230068907 - ENST00000457406.5@SLC16A14 ENST00000457406.5 protein_coding 230068555,230059094,230049761,230045657 230068907,230059366,230049904,230046722 Gene ID= ENSG00000163053.10 TPM= 7.24 Transcript Type= protein_coding chr2 230176475 230220112 230176475 230220112 - ENST00000258382.9@SP110 ENST00000258382.9 protein_coding 230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230202579,230200885,230185994,230183572,230178157,230177538,230176475 230220112,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230202728,230200965,230186143,230183640,230178255,230177680,230176724 Gene ID= ENSG00000135899.17 TPM= 11.77 Transcript Type= protein_coding chr2 230168918 230219950 230168918 230219950 - ENST00000258381.10@SP110 ENST00000258381.10 protein_coding 230219874,230216781,230214950,230212761,230212347,230211470,230209931,230207991,230202579,230200885,230185994,230183572,230178157,230177538,230172844,230172066,230171696,230170621,230168918 230219950,230216928,230215118,230213027,230212430,230211553,230210008,230208059,230202728,230200965,230186143,230183640,230178255,230177680,230172959,230172174,230171767,230170761,230169237 Gene ID= ENSG00000135899.17 TPM= 1.81 Transcript Type= protein_coding chr2 230327169 230403736 230327169 230403736 + transcript5738.chr2.nic@SP140L transcript5738.chr2.nic protein_coding 230327169,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230389919,230392087,230393414,230396757,230400127,230400334,230400955,230401366,230401664,230402798 230327301,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230390023,230392229,230393461,230396798,230400242,230400413,230401063,230401443,230401807,230403736 Gene ID= ENSG00000185404.16 TPM= 3.62 Transcript Type= NA chr2 230327169 230403736 230327169 230403736 + transcript5741.chr2.nnic@SP140L transcript5741.chr2.nnic protein_coding 230327169,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230389919,230392087,230393414,230396757,230400127,230400982,230401366,230401664,230402798 230327301,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230390023,230392229,230393461,230396798,230400242,230401063,230401443,230401807,230403736 Gene ID= ENSG00000185404.16 TPM= 1.81 Transcript Type= NA chr2 230327152 230388731 230327152 230388731 + transcript5744.chr2.nic@SP140L transcript5744.chr2.nic protein_coding 230327152,230328757,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559 230327301,230328831,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388731 Gene ID= ENSG00000185404.16 TPM= 1.81 Transcript Type= NA chr2 230327184 230403732 230327184 230403732 + ENST00000415673.6@SP140L ENST00000415673.6 protein_coding 230327184,230328757,230357805,230358964,230361614,230370908,230371598,230383510,230385224,230388559,230389919,230392087,230393414,230396757,230400127,230400955,230401366,230401664,230402798 230327301,230328831,230357967,230359132,230361697,230370967,230371651,230383575,230385304,230388633,230390023,230392229,230393461,230396798,230400242,230401063,230401443,230401807,230403732 Gene ID= ENSG00000185404.16 TPM= 7.24 Transcript Type= protein_coding chr2 230416156 230470534 230416156 230470534 + ENST00000427101.6@SP100 ENST00000427101.6 protein_coding 230416156,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015 230416328,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467206,230469096,230470534 Gene ID= ENSG00000067066.16 TPM= 30.79 Transcript Type= protein_coding chr2 230416247 230470517 230416247 230470517 + ENST00000409341.5@SP100 ENST00000409341.5 protein_coding 230416247,230417591,230442937,230444178,230446819,230449088,230449561,230450172,230461262,230462435,230464067,230466301,230467120,230469043,230470015 230416328,230417665,230443099,230444346,230446902,230449150,230449710,230450255,230461414,230462518,230464150,230466354,230467215,230469096,230470517 Gene ID= ENSG00000067066.16 TPM= 64.14 Transcript Type= protein_coding chr2 230712845 230821075 230712845 230821075 + ENST00000258418.9@CAB39 ENST00000258418.9 protein_coding 230712845,230759959,230790872,230793213,230798729,230810263,230814049,230817754,230818516 230713230,230760115,230791036,230793331,230798897,230810322,230814114,230817897,230821075 Gene ID= ENSG00000135932.10 TPM= 129.49 Transcript Type= protein_coding chr2 230864900 230879247 230864900 230879247 + ENST00000326427.10@ITM2C ENST00000326427.10 protein_coding 230864900,230873417,230875620,230876857,230877400,230878008 230865145,230873557,230875808,230876967,230877550,230879247 Gene ID= ENSG00000135916.15 TPM= 101.12 Transcript Type= protein_coding chr2 230864948 230879247 230864948 230879247 + ENST00000335005.10@ITM2C ENST00000335005.10 protein_coding 230864948,230875620,230876857,230877400,230878008 230865145,230875808,230876967,230877550,230879247 Gene ID= ENSG00000135916.15 TPM= 3.32 Transcript Type= protein_coding chr2 231056864 231172827 231056864 231172827 + ENST00000308696.10@PSMD1 ENST00000308696.10 protein_coding 231056864,231061267,231062248,231062506,231066906,231070025,231072189,231075511,231077034,231078659,231079536,231080141,231082883,231083567,231085019,231087117,231138736,231146240,231153564,231161340,231163635,231165200,231165871,231170566,231172535 231057041,231061310,231062321,231062675,231067111,231070168,231072415,231075571,231077162,231078747,231079614,231080314,231082994,231083763,231085114,231087181,231138850,231146356,231153666,231161509,231163727,231165286,231166017,231170721,231172827 Gene ID= ENSG00000173692.12 TPM= 215.97 Transcript Type= protein_coding chr2 231108238 231125110 231108238 231125110 - transcript5783.chr2.nnic@HTR2B transcript5783.chr2.nnic protein_coding 231124972,231123413,231113729,231108238 231125110,231123659,231113929,231109409 Gene ID= ENSG00000135914.5 TPM= 13.58 Transcript Type= NA chr2 231108238 231125076 231108238 231125076 - transcript5784.chr2.nnic@HTR2B transcript5784.chr2.nnic protein_coding 231124972,231123413,231113729,231108238 231125076,231123747,231113929,231109409 Gene ID= ENSG00000135914.5 TPM= 2.72 Transcript Type= NA chr2 231104957 231125081 231104957 231125081 - transcript5787.chr2.nnic@HTR2B transcript5787.chr2.nnic protein_coding 231124972,231113729,231104957 231125081,231113929,231109409 Gene ID= ENSG00000135914.5 TPM= 18.11 Transcript Type= NA chr2 231108230 231125118 231108230 231125118 - ENST00000258400.3@HTR2B ENST00000258400.3 protein_coding 231124972,231123413,231113729,231108230 231125118,231124130,231113929,231109409 Gene ID= ENSG00000135914.5 TPM= 31.69 Transcript Type= protein_coding chr2 231198698 231376848 231198698 231376848 + transcript5794.chr2.nic@ARMC9 transcript5794.chr2.nic protein_coding 231198698,231206198,231208127,231214831,231216638,231222728,231226774,231235224,231239943,231256586,231258991,231262306,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975,231355798,231360754,231369953,231371513 231198941,231206289,231208252,231215001,231216793,231222820,231226798,231235381,231240041,231256620,231259102,231262398,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345090,231355934,231360883,231370125,231376848 Gene ID= ENSG00000135931.17 TPM= 7.7 Transcript Type= NA chr2 231198636 231345203 231198636 231345203 + transcript5802.chr2.nic@ARMC9 transcript5802.chr2.nic protein_coding 231198636,231206198,231208127,231214831,231216638,231222728,231226774,231235224,231239943,231256586,231258991,231262306,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975 231198941,231206289,231208252,231215001,231216793,231222820,231226798,231235381,231240041,231256620,231259102,231262398,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345203 Gene ID= ENSG00000135931.17 TPM= 38.49 Transcript Type= NA chr2 231270696 231376848 231270696 231376848 + transcript5806.chr2.nic@ARMC9 transcript5806.chr2.nic protein_coding 231270696,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975,231355798,231360754,231369953,231371513 231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345090,231355934,231360883,231370125,231376848 Gene ID= ENSG00000135931.17 TPM= 4.07 Transcript Type= NA chr2 231270518 231345203 231270518 231345203 + transcript5810.chr2.nic@ARMC9 transcript5810.chr2.nic protein_coding 231270518,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975 231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345203 Gene ID= ENSG00000135931.17 TPM= 19.47 Transcript Type= NA chr2 231198580 231373895 231198580 231373895 + ENST00000614261.4@ARMC9 ENST00000614261.4 protein_coding 231198580,231206200,231208127,231214831,231216638,231222728,231226774,231235224,231239943,231256586,231258991,231262306,231270982,231272955,231276636,231278382,231282059,231291353,231296198,231331793,231344975,231355798,231360754,231369953,231371513 231198698,231206289,231208252,231215001,231216793,231222820,231226798,231235381,231240041,231256620,231259102,231262398,231271072,231273078,231276775,231278458,231282133,231291443,231296253,231331897,231345090,231355934,231360883,231370125,231373895 Gene ID= ENSG00000135931.17 TPM= 4.53 Transcript Type= protein_coding chr2 231395438 231401162 231395438 231401162 + transcript5812.chr2.nnic@B3GNT7 transcript5812.chr2.nnic protein_coding 231395438,231397731,231400145 231395814,231398916,231401162 Gene ID= ENSG00000156966.6 TPM= 2.72 Transcript Type= NA chr2 231395543 231401164 231395543 231401164 + ENST00000287590.5@B3GNT7 ENST00000287590.5 protein_coding 231395543,231397731 231395814,231401164 Gene ID= ENSG00000156966.6 TPM= 69.73 Transcript Type= protein_coding chr2 231523160 231530495 231523160 231530495 - ENST00000305141.4@NMUR1 ENST00000305141.4 protein_coding 231530359,231528123,231523160 231530495,231529017,231525425 Gene ID= ENSG00000171596.6 TPM= 5.43 Transcript Type= protein_coding chr2 231710467 231713550 231710467 231713550 + transcript5835.chr2.nic@PTMA transcript5835.chr2.nic protein_coding 231710467,231711348,231711890,231712443,231712804 231710676,231711419,231711983,231712516,231713550 Gene ID= ENSG00000187514.16 TPM= 12.22 Transcript Type= NA chr2 231708516 231713536 231708516 231713536 + ENST00000341369.11@PTMA ENST00000341369.11 protein_coding 231708516,231711348,231711887,231712443,231712804 231708751,231711419,231711983,231712516,231713536 Gene ID= ENSG00000187514.16 TPM= 34.86 Transcript Type= protein_coding chr2 231732425 231781309 231732425 231781309 - ENST00000287600.8@PDE6D ENST00000287600.8 protein_coding 231781065,231739100,231738013,231737187,231732425 231781309,231739188,231738138,231737292,231733033 Gene ID= ENSG00000156973.13 TPM= 22.64 Transcript Type= protein_coding chr2 231781730 231808727 231781730 231808727 + transcript5846.chr2.nnic@COPS7B transcript5846.chr2.nnic protein_coding 231781730,231788555,231791733,231794246,231796106,231798859,231807487 231781883,231788732,231791808,231794351,231796308,231798964,231808727 Gene ID= ENSG00000144524.17 TPM= 2.56 Transcript Type= NA chr2 231786439 231808727 231786439 231808727 + transcript5848.chr2.nnic@COPS7B transcript5848.chr2.nnic protein_coding 231786439,231788555,231791733,231794246,231796106,231798859,231807487 231786538,231788732,231791808,231794351,231796308,231798964,231808727 Gene ID= ENSG00000144524.17 TPM= 2.56 Transcript Type= NA chr2 231781728 231808727 231781728 231808727 + transcript5853.chr2.nic@COPS7B transcript5853.chr2.nic protein_coding 231781728,231788555,231794263,231796106,231798859,231807487 231781883,231791808,231794351,231796308,231798964,231808727 Gene ID= ENSG00000144524.17 TPM= 3.02 Transcript Type= NA chr2 231961583 232337197 231961583 232337197 + ENST00000325385.11@DIS3L2 ENST00000325385.11 protein_coding 231961583,232014835,232015514,232024277,232029979,232087487,232130619,232136472,232163459,232210326,232238533,232249239,232263207,232300040,232329813,232330690,232333840,232334369,232334631,232335773,232336469 231961765,232014979,232015671,232024330,232030080,232087721,232130719,232136719,232163632,232210405,232238645,232249346,232263440,232300119,232329996,232330776,232333987,232334499,232334735,232335874,232337197 Gene ID= ENSG00000144535.19 TPM= 11.77 Transcript Type= protein_coding chr2 232479827 232487828 232479827 232487828 - ENST00000304546.5@ECEL1 ENST00000304546.5 protein_coding 232487719,232485868,232485199,232484981,232484801,232484472,232484001,232483416,232483105,232482851,232482550,232482418,232481782,232481506,232481091,232480718,232480399,232479827 232487828,232486754,232485267,232485091,232484893,232484596,232484223,232483514,232483179,232482954,232482608,232482469,232481849,232481630,232481156,232480813,232480475,232480252 Gene ID= ENSG00000171551.11 TPM= 24.45 Transcript Type= protein_coding chr2 232550052 232569210 232550052 232569210 + ENST00000258416.7@EIF4E2 ENST00000258416.7 protein_coding 232550052,232556416,232557884,232564247,232566829,232567078,232568945 232550744,232556530,232558018,232564351,232566981,232567214,232569210 Gene ID= ENSG00000135930.13 TPM= 31.69 Transcript Type= protein_coding chr2 232551066 232569210 232551066 232569210 + transcript5868.chr2.nic@EIF4E2 transcript5868.chr2.nic protein_coding 232551066,232556416,232557884,232564247,232566829,232567078,232568945 232551218,232556530,232558018,232564351,232566981,232567214,232569210 Gene ID= ENSG00000135930.13 TPM= 2.72 Transcript Type= NA chr2 232550683 232583644 232550683 232583644 + ENST00000409098.5@EIF4E2 ENST00000409098.5 protein_coding 232550683,232556416,232557884,232564247,232566829,232567078,232580904 232550744,232556530,232558018,232564351,232566981,232567214,232583644 Gene ID= ENSG00000135930.13 TPM= 14.94 Transcript Type= protein_coding chr2 232550683 232583642 232550683 232583642 + ENST00000409514.5@EIF4E2 ENST00000409514.5 protein_coding 232550683,232556416,232557884,232564247,232566829,232567078,232574263,232580904 232550744,232556530,232558018,232564351,232566981,232567214,232574341,232583642 Gene ID= ENSG00000135930.13 TPM= 15.85 Transcript Type= protein_coding chr2 232633228 232682781 232633228 232682781 + ENST00000264059.7@EFHD1 ENST00000264059.7 protein_coding 232633228,232662802,232672309,232681585 232634006,232662949,232672443,232682781 Gene ID= ENSG00000115468.11 TPM= 8.15 Transcript Type= protein_coding chr2 232697331 232858627 232697331 232858627 + ENST00000409547.5@GIGYF2 ENST00000409547.5 protein_coding 232697331,232700585,232703424,232734417,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793 232697392,232700654,232703489,232734486,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858627 Gene ID= ENSG00000204120.14 TPM= 2.79 Transcript Type= protein_coding chr2 232697307 232858626 232697307 232858626 + transcript5881.chr2.nic@GIGYF2 transcript5881.chr2.nic protein_coding 232697307,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793 232697392,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858626 Gene ID= ENSG00000204120.14 TPM= 5.51 Transcript Type= NA chr2 232697307 232858612 232697307 232858612 + ENST00000373563.8@GIGYF2 ENST00000373563.8 protein_coding 232697307,232703424,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790698,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793 232697392,232703489,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858612 Gene ID= ENSG00000204120.14 TPM= 17.28 Transcript Type= protein_coding chr2 232697338 232858627 232697338 232858627 + ENST00000409196.7@GIGYF2 ENST00000409196.7 protein_coding 232697338,232735155,232747615,232748987,232756223,232760480,232761396,232787150,232790716,232791008,232791258,232794748,232796062,232806491,232809720,232811244,232812391,232815637,232816871,232819827,232832857,232839849,232844046,232844369,232845732,232847348,232850262,232856793 232697392,232735238,232747744,232749082,232756334,232760591,232761436,232787329,232790915,232791170,232791446,232794944,232796221,232806657,232809811,232811351,232812491,232815737,232817032,232819985,232833093,232839971,232844255,232844574,232845886,232847571,232850409,232858627 Gene ID= ENSG00000204120.14 TPM= 5.21 Transcript Type= protein_coding chr2 232878680 232902146 232878680 232902146 - transcript5887.chr2.nic@NGEF transcript5887.chr2.nic protein_coding 232901362,232894756,232892898,232891358,232888033,232885280,232883981,232883311,232882186,232881146,232878680 232902146,232894916,232893050,232891487,232888107,232885369,232884144,232883466,232882265,232881250,232879679 Gene ID= ENSG00000066248.14 TPM= 95.08 Transcript Type= NA chr2 232878680 232901518 232878680 232901518 - transcript5889.chr2.nic@NGEF transcript5889.chr2.nic protein_coding 232901362,232894756,232892898,232891358,232888033,232883981,232883311,232882186,232881146,232878680 232901518,232894916,232893050,232891487,232888107,232885369,232883466,232882265,232881250,232879679 Gene ID= ENSG00000066248.14 TPM= 5.43 Transcript Type= NA chr2 232878680 232891030 232878680 232891030 - transcript5892.chr2.nic@NGEF transcript5892.chr2.nic protein_coding 232890934,232888033,232885280,232883981,232883311,232882186,232881146,232878680 232891030,232888107,232885369,232884144,232883466,232882265,232881250,232879679 Gene ID= ENSG00000066248.14 TPM= 15.39 Transcript Type= NA chr2 233059967 233207903 233059967 233207903 + ENST00000359570.9@INPP5D ENST00000359570.9 protein_coding 233059967,233079335,233122107,233125748,233130508,233139842,233146162,233146367,233147471,233158313,233161724,233163707,233164307,233169305,233170026,233170496,233171064,233177265,233182410,233184408,233185843,233189850,233193812,233195399,233198095,233204126,233206706 233060612,233079398,233122257,233125919,233130648,233139929,233146242,233146438,233147594,233158419,233161826,233163903,233164424,233169401,233170164,233170604,233171152,233177346,233182499,233184521,233185925,233189937,233193961,233195495,233198376,233204717,233207903 Gene ID= ENSG00000168918.13 TPM= 11.77 Transcript Type= protein_coding chr2 233251571 233295674 233251571 233295674 + ENST00000392017.8@ATG16L1 ENST00000392017.8 protein_coding 233251571,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257 233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674 Gene ID= ENSG00000085978.21 TPM= 9.96 Transcript Type= protein_coding chr2 233251706 233295674 233251706 233295674 + ENST00000392020.8@ATG16L1 ENST00000392020.8 protein_coding 233251706,233256102,233263130,233263992,233264892,233270002,233272966,233274676,233277568,233281105,233282682,233289854,233290248,233292128,233292387,233293256,233294257 233251942,233256195,233263235,233264065,233265143,233270067,233273052,233274778,233277673,233281175,233282753,233289974,233290353,233292277,233292434,233293357,233295674 Gene ID= ENSG00000085978.21 TPM= 10.87 Transcript Type= protein_coding chr2 233251682 233295666 233251682 233295666 + ENST00000479942.5@ATG16L1 ENST00000479942.5 protein_coding 233251682,233256102,233263130,233263992,233264892,233270002,233272966,233273721,233274676,233277568,233281105,233282682,233289854,233292128,233292387,233293256,233294257 233251942,233256195,233263235,233264065,233265143,233270067,233273052,233273777,233274778,233277673,233281175,233282753,233290353,233292277,233292434,233293357,233295666 Gene ID= ENSG00000085978.21 TPM= 1.81 Transcript Type= retained_intron chr2 233354487 233472097 233354487 233472097 + transcript5908.chr2.nnic@DGKD transcript5908.chr2.nnic protein_coding 233354487,233388257,233390403,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371 233354674,233388367,233390483,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472097 Gene ID= ENSG00000077044.10 TPM= 4.37 Transcript Type= NA chr2 233354507 233472100 233354507 233472100 + ENST00000264057.6@DGKD ENST00000264057.6 protein_coding 233354507,233388257,233390403,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371 233354674,233388367,233390483,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472100 Gene ID= ENSG00000077044.10 TPM= 14.79 Transcript Type= protein_coding chr2 233388154 233472096 233388154 233472096 + ENST00000409813.7@DGKD ENST00000409813.7 protein_coding 233388154,233390403,233434380,233434769,233435818,233436316,233437377,233438217,233441887,233445623,233446712,233448087,233448276,233449103,233449982,233450922,233451964,233454763,233456899,233457221,233458284,233459757,233460194,233462348,233462643,233464164,233467086,233468423,233469371 233388367,233390483,233434484,233434901,233435924,233436441,233437479,233438379,233441995,233445762,233446796,233448181,233448375,233449376,233450131,233451050,233452060,233454873,233456995,233457328,233458397,233459891,233460345,233462459,233462735,233464283,233467203,233468553,233472096 Gene ID= ENSG00000077044.10 TPM= 3.47 Transcript Type= protein_coding chr2 233475526 233566782 233475526 233566782 - ENST00000251722.10@USP40 ENST00000251722.10 protein_coding 233566684,233565356,233562736,233559811,233556855,233554380,233551376,233549101,233542268,233540662,233533479,233529431,233527407,233525478,233524492,233523170,233520991,233519614,233512569,233511709,233510049,233499879,233498548,233496758,233493425,233491167,233489365,233488239,233485767,233485531,233481203,233475526 233566782,233565573,233562803,233559924,233557019,233554526,233551519,233549229,233542363,233540766,233533779,233529512,233527578,233525562,233524562,233523489,233521114,233519671,233512622,233511797,233510135,233499915,233498612,233496832,233493551,233491261,233489483,233488304,233485977,233485626,233481297,233477503 Gene ID= ENSG00000085982.13 TPM= 15.39 Transcript Type= protein_coding chr2 235027735 235055712 235027735 235055712 + transcript5929.chr2.nnic@SH3BP4 transcript5929.chr2.nnic protein_coding 235027735,235034871,235040888,235052562,235053592 235027855,235035120,235043247,235052750,235055712 Gene ID= ENSG00000130147.15 TPM= 5.43 Transcript Type= NA chr2 234951973 235055714 234951973 235055714 + ENST00000392011.6@SH3BP4 ENST00000392011.6 protein_coding 234951973,234995303,235034871,235040888,235052562,235053592 234952170,234995376,235035120,235043247,235052750,235055714 Gene ID= ENSG00000130147.15 TPM= 19.92 Transcript Type= protein_coding chr2 235709177 236131800 235709177 236131800 + ENST00000614409.4@AGAP1 ENST00000614409.4 protein_coding 235709177,235717557,235740963,235744698,235750354,235797759,235799367,235807239,235883345,235908738,235968462,236036561,236040751,236049059,236120192,236123919 235709237,235717644,235741048,235744839,235750488,235797886,235799522,235807331,235883449,235908906,235968623,236036715,236040841,236049281,236120447,236131800 Gene ID= ENSG00000157985.18 TPM= 7.24 Transcript Type= protein_coding chr2 237085312 237100466 237085312 237100466 + ENST00000354371.6@COPS8 ENST00000354371.6 protein_coding 237085312,237087127,237088605,237089862,237094090,237095822,237096822,237097663 237086042,237087197,237088653,237089994,237094197,237095884,237096869,237100466 Gene ID= ENSG00000198612.10 TPM= 73.35 Transcript Type= protein_coding chr2 237371617 237414207 237371617 237414207 - ENST00000392003.6@COL6A3 ENST00000392003.6 protein_coding 237413953,237396727,237380915,237378636,237376772,237374412,237371617 237414207,237396847,237381499,237379235,237377344,237375020,237372337 Gene ID= ENSG00000163359.15 TPM= 1.81 Transcript Type= protein_coding chr2 237574322 237591093 237574322 237591093 - ENST00000264601.7@RAB17 ENST00000264601.7 protein_coding 237590467,237585998,237578004,237577257,237575387,237574322 237591093,237586157,237578155,237577382,237575480,237575128 Gene ID= ENSG00000124839.12 TPM= 5.43 Transcript Type= protein_coding chr2 237627571 237780309 237627571 237780309 + transcript5945.chr2.nic@LRRFIP1 transcript5945.chr2.nic protein_coding 237627571,237708544,237748364,237749199,237753309,237756095,237760064,237769943,237772081,237772866,237774358,237779422 237627740,237708630,237748399,237749324,237753479,237756187,237760205,237769992,237772198,237772945,237774462,237780309 Gene ID= ENSG00000124831.18 TPM= 3.17 Transcript Type= NA chr2 237692147 237780309 237692147 237780309 + transcript5949.chr2.nic@LRRFIP1 transcript5949.chr2.nic protein_coding 237692147,237708544,237748364,237749199,237753309,237756095,237760064,237769943,237772081,237772866,237774358,237779422 237692521,237708630,237748399,237749324,237753479,237756187,237760205,237769992,237772198,237772945,237774462,237780309 Gene ID= ENSG00000124831.18 TPM= 4.07 Transcript Type= NA chr2 237627571 237765913 237627571 237765913 + transcript5953.chr2.nic@LRRFIP1 transcript5953.chr2.nic protein_coding 237627571,237708544,237748364,237749199,237753309,237756095,237760064,237762603 237627740,237708630,237748399,237749324,237753479,237756187,237760205,237765913 Gene ID= ENSG00000124831.18 TPM= 12.68 Transcript Type= NA chr2 237859544 237912114 237859544 237912114 + ENST00000254661.4@RAMP1 ENST00000254661.4 protein_coding 237859544,237877224,237911528 237859727,237877362,237912114 Gene ID= ENSG00000132329.10 TPM= 8.15 Transcript Type= protein_coding chr2 237966955 238042595 237966955 238042595 + ENST00000272930.8@UBE2F ENST00000272930.8 protein_coding 237966955,237973092,237987963,237994744,238016566,238025342,238030556,238032222,238035878,238041288 237967132,237973225,237987992,237994809,238016633,238025412,238030613,238032254,238035940,238042595 Gene ID= ENSG00000184182.18 TPM= 53.43 Transcript Type= protein_coding chr2 238060889 238099413 238060889 238099413 + ENST00000254663.10@SCLY ENST00000254663.10 protein_coding 238060889,238064357,238068065,238069297,238081709,238082045,238083248,238091218,238093861,238094420,238096801,238098202 238061143,238064469,238068165,238069477,238081836,238082209,238083354,238091254,238093944,238094522,238096876,238099413 Gene ID= ENSG00000132330.16 TPM= 6.34 Transcript Type= protein_coding chr2 238170403 238203676 238170403 238203676 - transcript5967.chr2.nic@ILKAP transcript5967.chr2.nic protein_coding 238203499,238194782,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170403 238203676,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676 Gene ID= ENSG00000132323.8 TPM= 2.72 Transcript Type= NA chr2 238170403 238203653 238170403 238203653 - transcript5971.chr2.nnic@ILKAP transcript5971.chr2.nnic protein_coding 238203499,238194805,238194275,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170403 238203653,238194870,238194331,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676 Gene ID= ENSG00000132323.8 TPM= 1.81 Transcript Type= NA chr2 238170401 238203729 238170401 238203729 - ENST00000254654.7@ILKAP ENST00000254654.7 protein_coding 238203499,238194805,238194275,238189853,238188131,238185181,238184020,238183653,238182065,238173534,238170943,238170401 238203729,238194870,238194331,238189972,238188257,238185287,238184113,238183740,238182186,238173653,238171024,238170676 Gene ID= ENSG00000132323.8 TPM= 31.69 Transcript Type= protein_coding chr2 238238267 238240124 238238267 238240124 - ENST00000272937.9@HES6 ENST00000272937.9 protein_coding 238239825,238239661,238239487,238238267 238240124,238239747,238239568,238239251 Gene ID= ENSG00000144485.10 TPM= 12.22 Transcript Type= protein_coding chr2 238238270 238240038 238238270 238240038 - ENST00000409160.7@HES6 ENST00000409160.7 protein_coding 238239825,238239661,238238270 238240038,238239747,238239568 Gene ID= ENSG00000144485.10 TPM= 4.98 Transcript Type= protein_coding chr2 238848032 238910543 238848032 238910543 + ENST00000612363.1@TWIST2 ENST00000612363.1 protein_coding 238848032,238909842 238848733,238910543 Gene ID= ENSG00000233608.3 TPM= 3.62 Transcript Type= protein_coding chr2 239092880 239401000 239092880 239401000 - transcript5999.chr2.nnic@HDAC4 transcript5999.chr2.nnic protein_coding 239400692,239352678,239236593,239189833,239176413,239163803,239156652,239144583,239139684,239134527,239134245,239126456,239115053,239111526,239108050,239102776,239092880 239401000,239352918,239236664,239190077,239176563,239163923,239156773,239144714,239139796,239134643,239134443,239126679,239115310,239111712,239108183,239102896,239095056 Gene ID= ENSG00000068024.16 TPM= 4.53 Transcript Type= NA chr2 239957372 240025402 239957372 240025402 - ENST00000252711.6@NDUFA10 ENST00000252711.6 protein_coding 240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239957372 240025402,240022340,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186 Gene ID= ENSG00000130414.11 TPM= 306.53 Transcript Type= protein_coding chr2 239960741 240025345 239960741 240025345 - ENST00000620965.4@NDUFA10 ENST00000620965.4 protein_coding 240025245,240025227,240022172,240021197,240018553,240014739,240011617,240007316,240005210,239990074,239960741 240025345,240025243,240022341,240021412,240018639,240014860,240011696,240007370,240005295,239990182,239961186 Gene ID= ENSG00000130414.11 TPM= 3.62 Transcript Type= protein_coding chr2 239960741 240025323 239960741 240025323 - ENST00000485344.6@NDUFA10 ENST00000485344.6 protein_coding 240025227,240022172,240021197,240018553,240011617,240007316,240005210,239990074,239960741 240025323,240022340,240021412,240018639,240014860,240007370,240005295,239990182,239961186 Gene ID= ENSG00000130414.11 TPM= 9.06 Transcript Type= retained_intron chr2 240018407 240025307 240018407 240025307 - ENST00000407129.3@NDUFA10 ENST00000407129.3 protein_coding 240025227,240022172,240021197,240018407 240025307,240022340,240021412,240018639 Gene ID= ENSG00000130414.11 TPM= 2.72 Transcript Type= protein_coding chr2 240130826 240136303 240130826 240136303 - ENST00000607357.1@COPS9 ENST00000607357.1 protein_coding 240136222,240133933,240130826 240136303,240134005,240131088 Gene ID= ENSG00000172428.10 TPM= 57.95 Transcript Type= protein_coding chr2 240435347 240468076 240435347 240468076 + transcript6009.chr2.nic@GPC1 transcript6009.chr2.nic protein_coding 240435347,240459030,240462191,240463347,240464616,240464856,240465077,240465473,240466058,240466446 240436084,240459188,240462582,240463512,240464746,240464975,240465210,240465648,240466369,240468076 Gene ID= ENSG00000063660.8 TPM= 34.56 Transcript Type= NA chr2 240435671 240468078 240435671 240468078 + ENST00000264039.6@GPC1 ENST00000264039.6 protein_coding 240435671,240459030,240462191,240463347,240464616,240464856,240465077,240465473,240466058 240436084,240459188,240462582,240463512,240464746,240464975,240465210,240465648,240468078 Gene ID= ENSG00000063660.8 TPM= 781.64 Transcript Type= protein_coding chr2 240521938 240561091 240521938 240561091 - ENST00000405002.5@ANKMY1 ENST00000405002.5 protein_coding 240560731,240554866,240552914,240525685,240521938 240561091,240555055,240553057,240525849,240524381 Gene ID= ENSG00000144504.15 TPM= 1.81 Transcript Type= protein_coding chr2 240560302 240564014 240560302 240564014 + ENST00000405954.1@DUSP28 ENST00000405954.1 protein_coding 240560302,240561330 240561077,240564014 Gene ID= ENSG00000188542.9 TPM= 5.43 Transcript Type= protein_coding chr2 240560792 240564014 240560792 240564014 + ENST00000438823.1@DUSP28 ENST00000438823.1 protein_coding 240560792,240561330,240563674 240561077,240561519,240564014 Gene ID= ENSG00000188542.9 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr2 240568440 240578733 240568440 240578733 + transcript6064.chr2.nic@RNPEPL1 transcript6064.chr2.nic protein_coding 240568440,240572423,240573110,240573775,240574113,240574515,240575030,240575502,240576568,240576848,240577599 240569114,240572563,240573261,240573891,240574348,240574628,240575142,240575610,240576765,240576990,240578733 Gene ID= ENSG00000142327.12 TPM= 25.36 Transcript Type= NA chr2 240586366 240599123 240586366 240599123 + transcript6074.chr2.nic@CAPN10 transcript6074.chr2.nic protein_coding 240586366,240589343,240590815,240591933,240593906,240594543,240595024,240595934,240596319,240596681,240597888,240598352,240598651 240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596152,240596521,240596942,240598087,240598397,240599123 Gene ID= ENSG00000142330.19 TPM= 3.05 Transcript Type= NA chr2 240586730 240599123 240586730 240599123 + transcript6091.chr2.nic@CAPN10 transcript6091.chr2.nic protein_coding 240586730,240589343,240590815,240591933,240593906,240594543,240595024,240596681,240597888,240598352,240598651 240587052,240589474,240591011,240592150,240594047,240594709,240596521,240596942,240598087,240598397,240599123 Gene ID= ENSG00000142330.19 TPM= 5.77 Transcript Type= NA chr2 240586366 240599123 240586366 240599123 + transcript6097.chr2.nic@CAPN10 transcript6097.chr2.nic protein_coding 240586366,240589343,240590815,240591933,240593906,240594543,240595024,240597888,240598352,240598651 240587052,240589474,240591011,240592150,240594047,240594709,240596942,240598087,240598397,240599123 Gene ID= ENSG00000142330.19 TPM= 7.58 Transcript Type= NA chr2 240586716 240599109 240586716 240599109 + ENST00000391984.6@CAPN10 ENST00000391984.6 protein_coding 240586716,240589343,240590815,240591933,240593906,240594543,240595024,240596319,240596681,240597888,240598352,240598651 240587052,240589474,240591011,240592150,240594047,240594709,240595304,240596521,240596942,240598087,240598397,240599109 Gene ID= ENSG00000142330.19 TPM= 70.06 Transcript Type= protein_coding chr2 240998618 241055603 240998618 241055603 + transcript6105.chr2.nic@SNED1 transcript6105.chr2.nic protein_coding 240998618,241030284,241033735,241034568,241036790,241037240,241040075,241040300,241048315,241048662,241049022,241049817,241051744,241052041,241052355,241053153 240999050,241030571,241033875,241034730,241036915,241037353,241040188,241040413,241048440,241048766,241049135,241049933,241051860,241052157,241052468,241055603 Gene ID= ENSG00000162804.13 TPM= 3.62 Transcript Type= NA chr2 240998618 241050404 240998618 241050404 + transcript6106.chr2.nic@SNED1 transcript6106.chr2.nic protein_coding 240998618,241030284,241033735,241034568,241036790,241037240,241040075,241040300,241048315,241048662,241049022,241049817 240999050,241030571,241033875,241034730,241036915,241037353,241040188,241040413,241048440,241048766,241049135,241050404 Gene ID= ENSG00000162804.13 TPM= 1.81 Transcript Type= NA chr2 240998618 241041361 240998618 241041361 + transcript6107.chr2.nic@SNED1 transcript6107.chr2.nic protein_coding 240998618,241030284,241033735,241034568,241036790,241037240,241040075,241040300 240999050,241030571,241033875,241034730,241036915,241037353,241040188,241041361 Gene ID= ENSG00000162804.13 TPM= 1.81 Transcript Type= NA chr2 241074411 241102318 241074411 241102318 - transcript6111.chr2.nic@MTERF4 transcript6111.chr2.nic protein_coding 241102253,241097243,241094277,241089980,241089188,241074411 241102318,241097427,241094432,241090044,241089365,241075682 Gene ID= ENSG00000122085.16 TPM= 2.72 Transcript Type= NA chr2 241087153 241102324 241087153 241102324 - transcript6113.chr2.nic@MTERF4 transcript6113.chr2.nic protein_coding 241102253,241099396,241097243,241094277,241089980,241087153 241102324,241099894,241097427,241094432,241090044,241089365 Gene ID= ENSG00000122085.16 TPM= 3.62 Transcript Type= NA chr2 241072169 241102332 241072169 241102332 - ENST00000464344.6@MTERF4 ENST00000464344.6 protein_coding 241102253,241094277,241089980,241089188,241072169 241102332,241094432,241090044,241089365,241075682 Gene ID= ENSG00000122085.16 TPM= 1.81 Transcript Type= processed_transcript chr2 241095566 241102332 241095566 241102332 - ENST00000391980.6@MTERF4 ENST00000391980.6 protein_coding 241102253,241099396,241097243,241095566 241102332,241099894,241097427,241096438 Gene ID= ENSG00000122085.16 TPM= 30.79 Transcript Type= protein_coding chr2 241106099 241149504 241106099 241149504 - ENST00000234040.8@PASK ENST00000234040.8 protein_coding 241149414,241142837,241140521,241139885,241138654,241137953,241137004,241135871,241132874,241126196,241123949,241122732,241115288,241115043,241112240,241108167,241107353,241106099 241149504,241143074,241140753,241140055,241138794,241138087,241137264,241136039,241133030,241127451,241124133,241122899,241115413,241115177,241112439,241108300,241107499,241106723 Gene ID= ENSG00000115687.13 TPM= 2.72 Transcript Type= protein_coding chr2 241150022 241183652 241150022 241183652 + ENST00000234038.10@PPP1R7 ENST00000234038.10 protein_coding 241150022,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241169781,241182647 241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241169867,241183652 Gene ID= ENSG00000115685.14 TPM= 55.24 Transcript Type= protein_coding chr2 241150464 241180262 241150464 241180262 + transcript6123.chr2.nnic@PPP1R7 transcript6123.chr2.nnic protein_coding 241150464,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241169781,241178644 241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241169867,241180262 Gene ID= ENSG00000115685.14 TPM= 1.81 Transcript Type= NA chr2 241150464 241183024 241150464 241183024 + transcript6127.chr2.nnic@PPP1R7 transcript6127.chr2.nnic protein_coding 241150464,241153476,241157807,241158484,241160332,241163285,241166337,241169781,241182647 241150547,241153604,241157862,241158549,241160494,241163401,241166441,241169867,241183024 Gene ID= ENSG00000115685.14 TPM= 1.81 Transcript Type= NA chr2 241150480 241167174 241150480 241167174 + ENST00000406106.7@PPP1R7 ENST00000406106.7 protein_coding 241150480,241153476,241157807,241158484,241159213,241160332,241163285,241166337,241167045 241150547,241153604,241157862,241158549,241159343,241160494,241163401,241166441,241167174 Gene ID= ENSG00000115685.14 TPM= 16.3 Transcript Type= protein_coding chr2 241218185 241225184 241218185 241225184 + ENST00000487192.1@ANO7 ENST00000487192.1 protein_coding 241218185,241223186 241218381,241225184 Gene ID= ENSG00000146205.13 TPM= 1.81 Transcript Type= retained_intron chr2 241227264 241272886 241227264 241272886 - ENST00000391975.5@HDLBP ENST00000391975.5 protein_coding 241272761,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241227264 241272886,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687 Gene ID= ENSG00000115677.16 TPM= 370.99 Transcript Type= protein_coding chr2 241227288 241272659 241227288 241272659 - transcript6162.chr2.nic@HDLBP transcript6162.chr2.nic protein_coding 241271917,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241227288 241272659,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687 Gene ID= ENSG00000115677.16 TPM= 44.36 Transcript Type= NA chr2 241229212 241315292 241229212 241315292 - ENST00000391976.6@HDLBP ENST00000391976.6 protein_coding 241315102,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212 241315292,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687 Gene ID= ENSG00000115677.16 TPM= 210.74 Transcript Type= protein_coding chr2 241229212 241315842 241229212 241315842 - ENST00000310931.8@HDLBP ENST00000310931.8 protein_coding 241315570,241268477,241266794,241264448,241262711,241256600,241256184,241255374,241255051,241253393,241252957,241249841,241248244,241248003,241247056,241246752,241242460,241239901,241239602,241238649,241236615,241235490,241235121,241233820,241230759,241230153,241229833,241229212 241315842,241268541,241266906,241264605,241262926,241256806,241256399,241255580,241255158,241253497,241253035,241249980,241248348,241248116,241247142,241246883,241242678,241240122,241239820,241238787,241236769,241235594,241235255,241233963,241230944,241230269,241229961,241229687 Gene ID= ENSG00000115677.16 TPM= 128.33 Transcript Type= protein_coding chr2 241315289 241354024 241315289 241354024 + ENST00000360051.7@SEPT2 ENST00000360051.7 protein_coding 241315289,241317499,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967 241315610,241317599,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354024 Gene ID= ENSG00000168385.17 TPM= 4.68 Transcript Type= protein_coding chr2 241315864 241354026 241315864 241354026 + transcript6191.chr2.nic@SEPT2 transcript6191.chr2.nic protein_coding 241315864,241317499,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967 241315982,241317599,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354026 Gene ID= ENSG00000168385.17 TPM= 15.55 Transcript Type= NA chr2 241315861 241354027 241315861 241354027 + ENST00000391971.6@SEPT2 ENST00000391971.6 protein_coding 241315861,241324216,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967 241315982,241324241,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027 Gene ID= ENSG00000168385.17 TPM= 348.56 Transcript Type= protein_coding chr2 241315883 241354027 241315883 241354027 + ENST00000407971.5@SEPT2 ENST00000407971.5 protein_coding 241315883,241325993,241335126,241335975,241337382,241337673,241342992,241343752,241346166,241348134,241350073,241351967 241315982,241326113,241335212,241336098,241337516,241337790,241343093,241343897,241346249,241348191,241350203,241354027 Gene ID= ENSG00000168385.17 TPM= 6.09 Transcript Type= protein_coding chr2 241356243 241494841 241356243 241494841 + ENST00000264042.7@FARP2 ENST00000264042.7 protein_coding 241356243,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304,241456747,241462523,241463335,241463899,241468140,241475857,241483465,241484242,241489962,241491061,241491516,241492929,241493293,241494008 241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241441556,241456922,241462612,241463468,241463980,241468377,241475987,241483533,241484331,241490044,241491179,241491679,241493036,241493444,241494841 Gene ID= ENSG00000006607.13 TPM= 24.45 Transcript Type= protein_coding chr2 241356315 241447137 241356315 241447137 + transcript6234.chr2.nic@FARP2 transcript6234.chr2.nic protein_coding 241356315,241373084,241403828,241404799,241407537,241411033,241413307,241417962,241431679,241434158,241434962,241436481,241441304 241356388,241373290,241403932,241404841,241407615,241411130,241413421,241418109,241431774,241434321,241435030,241436538,241447137 Gene ID= ENSG00000006607.13 TPM= 2.72 Transcript Type= NA chr2 241492674 241508692 241492674 241508692 - ENST00000316586.8@STK25 ENST00000316586.8 protein_coding 241508443,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241492674 241508692,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701 Gene ID= ENSG00000115694.14 TPM= 156.7 Transcript Type= protein_coding chr2 241494713 241508638 241494713 241508638 - transcript6240.chr2.nic@STK25 transcript6240.chr2.nic protein_coding 241508443,241508006,241501528,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241494713 241508638,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701 Gene ID= ENSG00000115694.14 TPM= 22.68 Transcript Type= NA chr2 241494715 241508617 241494715 241508617 - transcript6245.chr2.nic@STK25 transcript6245.chr2.nic protein_coding 241508443,241508006,241501478,241500740,241499257,241498989,241498639,241498235,241497616,241496398,241494715 241508617,241508135,241501708,241500796,241500281,241499174,241498784,241498349,241497687,241496534,241495701 Gene ID= ENSG00000115694.14 TPM= 19.74 Transcript Type= NA chr2 241495017 241508688 241495017 241508688 - ENST00000403346.7@STK25 ENST00000403346.7 protein_coding 241508505,241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495017 241508688,241508135,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701 Gene ID= ENSG00000115694.14 TPM= 33.55 Transcript Type= protein_coding chr2 241495019 241508362 241495019 241508362 - ENST00000401869.5@STK25 ENST00000401869.5 protein_coding 241508006,241501478,241500740,241500173,241499257,241498989,241498639,241498235,241497616,241496398,241495019 241508362,241501708,241500796,241500281,241499414,241499174,241498784,241498349,241497687,241496534,241495701 Gene ID= ENSG00000115694.14 TPM= 38.08 Transcript Type= protein_coding chr2 241558750 241574136 241558750 241574136 + transcript6249.chr2.nnic@BOK transcript6249.chr2.nnic protein_coding 241558750,241559455,241562348,241570125,241572297 241558993,241559678,241562476,241570288,241574136 Gene ID= ENSG00000176720.5 TPM= 1.81 Transcript Type= NA chr2 241558750 241574136 241558750 241574136 + transcript6251.chr2.nnic@BOK transcript6251.chr2.nnic protein_coding 241558750,241559455,241562348,241570125,241572297 241559088,241559703,241562476,241570288,241574136 Gene ID= ENSG00000176720.5 TPM= 4.53 Transcript Type= NA chr2 241559057 241574136 241559057 241574136 + transcript6253.chr2.nic@BOK transcript6253.chr2.nic protein_coding 241559057,241562348,241570125,241572297 241559703,241562476,241570288,241574136 Gene ID= ENSG00000176720.5 TPM= 10.87 Transcript Type= NA chr2 241558721 241574138 241558721 241574138 + ENST00000318407.4@BOK ENST00000318407.4 protein_coding 241558721,241559455,241562348,241570125,241572297 241558993,241559703,241562476,241570288,241574138 Gene ID= ENSG00000176720.5 TPM= 67.01 Transcript Type= protein_coding chr2 241637628 241673849 241637628 241673849 + transcript6256.chr2.nic@ATG4B transcript6256.chr2.nic protein_coding 241637628,241651010,241651264,241651884,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312 241637724,241651111,241651335,241651974,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241673849 Gene ID= ENSG00000168397.16 TPM= 4.75 Transcript Type= NA chr2 241637692 241673852 241637692 241673852 + transcript6259.chr2.nic@ATG4B transcript6259.chr2.nic protein_coding 241637692,241651010,241651264,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191 241637724,241651111,241651335,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673852 Gene ID= ENSG00000168397.16 TPM= 7.02 Transcript Type= NA chr2 241637651 241673849 241637651 241673849 + transcript6265.chr2.nic@ATG4B transcript6265.chr2.nic protein_coding 241637651,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312 241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241673849 Gene ID= ENSG00000168397.16 TPM= 19.24 Transcript Type= NA chr2 241637689 241672630 241637689 241672630 + transcript6268.chr2.nic@ATG4B transcript6268.chr2.nic protein_coding 241637689,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241671312 241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241670782,241672630 Gene ID= ENSG00000168397.16 TPM= 2.72 Transcript Type= NA chr2 241637612 241673857 241637612 241673857 + ENST00000404914.7@ATG4B ENST00000404914.7 protein_coding 241637612,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191 241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671405,241673857 Gene ID= ENSG00000168397.16 TPM= 69.5 Transcript Type= protein_coding chr2 241637612 241672628 241637612 241672628 + ENST00000402096.5@ATG4B ENST00000402096.5 protein_coding 241637612,241651010,241651264,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312,241672191 241637724,241651111,241651335,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241671441,241672628 Gene ID= ENSG00000168397.16 TPM= 1.81 Transcript Type= protein_coding chr2 241637698 241672631 241637698 241672631 + ENST00000482507.5@ATG4B ENST00000482507.5 protein_coding 241637698,241651010,241651264,241653307,241653512,241654546,241655271,241659108,241666645,241668143,241668540,241670726,241671312 241637724,241651111,241651335,241653369,241653610,241654647,241655343,241659187,241666838,241668221,241668685,241670782,241672631 Gene ID= ENSG00000168397.16 TPM= 11.77 Transcript Type= retained_intron chr2 241675739 241686821 241675739 241686821 - transcript6277.chr2.nnic@DTYMK transcript6277.chr2.nnic protein_coding 241686654,241685769,241680229,241678452,241675739 241686821,241685877,241680319,241678577,241676237 Gene ID= ENSG00000168393.12 TPM= 2.26 Transcript Type= NA chr2 241675742 241686991 241675742 241686991 - ENST00000305784.6@DTYMK ENST00000305784.6 protein_coding 241686654,241685769,241680229,241678452,241675742 241686991,241685877,241680319,241678649,241676237 Gene ID= ENSG00000168393.12 TPM= 28.52 Transcript Type= protein_coding chr2 241702040 241729478 241702040 241729478 + ENST00000313552.10@ING5 ENST00000313552.10 protein_coding 241702040,241704653,241709216,241711377,241711978,241722939,241723210,241724989 241702102,241704724,241709382,241711488,241712071,241723074,241723271,241729478 Gene ID= ENSG00000168395.15 TPM= 6.34 Transcript Type= protein_coding chr2 241734579 241768816 241734579 241768816 + transcript6296.chr2.nic@D2HGDH transcript6296.chr2.nic protein_coding 241734579,241735133,241741033,241742435,241743622,241744709,241748865,241750151,241751246,241755849,241767710 241734695,241735516,241741090,241742574,241743815,241744877,241748942,241750294,241751388,241756014,241768816 Gene ID= ENSG00000180902.17 TPM= 63.2 Transcript Type= NA chr2 241734579 241768816 241734579 241768816 + transcript6304.chr2.nnic@D2HGDH transcript6304.chr2.nnic protein_coding 241734579,241735133,241741033,241742435,241743622,241744709,241748865,241750151,241751246,241767710 241734695,241735516,241741090,241742574,241743815,241744877,241748942,241750294,241751388,241768816 Gene ID= ENSG00000180902.17 TPM= 5.7 Transcript Type= NA chr2 241734579 241768811 241734579 241768811 + ENST00000321264.8@D2HGDH ENST00000321264.8 protein_coding 241734579,241735133,241741033,241742435,241743622,241744709,241750151,241751246,241755849,241767710 241734695,241735516,241741090,241742574,241743815,241744877,241750294,241751388,241756014,241768811 Gene ID= ENSG00000180902.17 TPM= 57.76 Transcript Type= protein_coding chr2 241734615 241768811 241734615 241768811 + ENST00000436747.5@D2HGDH ENST00000436747.5 protein_coding 241734615,241735133,241741033,241742435,241743639,241744709,241748865,241750151,241751246,241754631,241755045,241767710 241734695,241735516,241741090,241742574,241743815,241744877,241749929,241750294,241751388,241754746,241756014,241768811 Gene ID= ENSG00000180902.17 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr2 241849881 241858908 241849881 241858908 - ENST00000334409.9@PDCD1 ENST00000334409.9 protein_coding 241858763,241852621,241852198,241851949,241849881 241858908,241852980,241852353,241851983,241851297 Gene ID= ENSG00000188389.10 TPM= 2.72 Transcript Type= protein_coding chr3 1092576 1404217 1092576 1404217 + ENST00000446702.6@CNTN6 ENST00000446702.6 protein_coding 1092576,1147927,1220687,1227818,1278413,1295601,1297889,1321650,1325815,1327457,1329785,1352324,1372299,1372838,1373604,1373924,1377005,1382942,1383293,1385611,1401433,1402318,1403318 1093120,1148063,1220813,1227993,1278508,1295804,1297991,1321834,1325951,1327586,1329935,1352451,1372474,1372955,1373762,1374073,1377075,1383176,1383408,1385797,1401545,1402486,1404217 Gene ID= ENSG00000134115.12 TPM= 11.77 Transcript Type= protein_coding chr3 1092722 1403606 1092722 1403606 + transcript4.chr3.nnic@CNTN6 transcript4.chr3.nnic protein_coding 1092722,1147927,1220687,1227818,1278413,1295601,1297889,1321650,1325815,1327457,1329785,1352324,1372838,1373604,1373924,1377005,1382942,1383293,1385611,1401433,1402318,1403318 1093120,1148063,1220813,1227993,1278508,1295804,1297991,1321834,1325951,1327586,1329935,1352451,1372955,1373762,1374073,1377075,1383176,1383408,1385797,1401545,1402486,1403606 Gene ID= ENSG00000134115.12 TPM= 2.72 Transcript Type= NA chr3 1203408 1403589 1203408 1403589 + transcript5.chr3.nnic@CNTN6 transcript5.chr3.nnic protein_coding 1203408,1220687,1227818,1278413,1295601,1297889,1321650,1325815,1327457,1329785,1352324,1372299,1372838,1373604,1373924,1377005,1382942,1383293,1385611,1401433,1402318,1403318 1203545,1220813,1227993,1278508,1295804,1297991,1321834,1325951,1327586,1329935,1352451,1372474,1372955,1373762,1374073,1377075,1383176,1383408,1385797,1401545,1402486,1403589 Gene ID= ENSG00000134115.12 TPM= 1.81 Transcript Type= NA chr3 1092893 1280247 1092893 1280247 + transcript9.chr3.nic@CNTN6 transcript9.chr3.nic protein_coding 1092893,1147927,1220687,1227818,1278413 1093120,1148063,1220813,1227993,1280247 Gene ID= ENSG00000134115.12 TPM= 1.81 Transcript Type= NA chr3 3126916 3149023 3126916 3149023 + ENST00000251607.10@TRNT1 ENST00000251607.10 protein_coding 3126916,3129014,3137260,3140510,3144584,3146430,3147450,3147906 3126990,3129188,3137453,3140648,3144710,3146623,3147703,3149023 Gene ID= ENSG00000072756.16 TPM= 18.11 Transcript Type= protein_coding chr3 3126951 3130679 3126951 3130679 + ENST00000339437.10@TRNT1 ENST00000339437.10 protein_coding 3126951,3129014,3129919 3126990,3129188,3130679 Gene ID= ENSG00000072756.16 TPM= 6.34 Transcript Type= protein_coding chr3 4303622 4317266 4303622 4317266 + transcript22.chr3.nnic@SETMAR transcript22.chr3.nnic protein_coding 4303622,4312898,4313667,4316212 4303868,4313229,4313761,4317266 Gene ID= ENSG00000170364.12 TPM= 1.81 Transcript Type= NA chr3 4303341 4317264 4303341 4317264 + transcript24.chr3.nnic@SETMAR transcript24.chr3.nnic protein_coding 4303341,4313667,4316212 4303526,4313761,4317264 Gene ID= ENSG00000170364.12 TPM= 2.72 Transcript Type= NA chr3 4303337 4317265 4303337 4317265 + ENST00000425046.1@SETMAR ENST00000425046.1 protein_coding 4303337,4313647,4316212 4303526,4313761,4317265 Gene ID= ENSG00000170364.12 TPM= 6.79 Transcript Type= nonsense_mediated_decay chr3 4303371 4317265 4303371 4317265 + ENST00000425863.5@SETMAR ENST00000425863.5 protein_coding 4303371,4312898,4313647,4316212 4303526,4313229,4313761,4317265 Gene ID= ENSG00000170364.12 TPM= 2.26 Transcript Type= protein_coding chr3 4361146 4467281 4361146 4467281 - ENST00000272902.9@SUMF1 ENST00000272902.9 protein_coding 4466976,4452876,4449266,4420064,4418010,4417128,4410865,4376330,4361146 4467281,4453049,4449340,4420146,4418132,4417242,4410978,4376389,4362254 Gene ID= ENSG00000144455.13 TPM= 106.85 Transcript Type= protein_coding chr3 4979116 4985323 4979116 4985323 + ENST00000256495.3@BHLHE40 ENST00000256495.3 protein_coding 4979116,4979962,4980301,4981392,4982836 4979798,4980031,4980408,4981515,4985323 Gene ID= ENSG00000134107.4 TPM= 314.52 Transcript Type= protein_coding chr3 4979426 4985192 4979426 4985192 + transcript53.chr3.nic@BHLHE40 transcript53.chr3.nic protein_coding 4979426,4979962,4982836 4979798,4981515,4985192 Gene ID= ENSG00000134107.4 TPM= 6.64 Transcript Type= NA chr3 5122245 5180912 5122245 5180912 + ENST00000611208.4@ARL8B ENST00000611208.4 protein_coding 5122245,5170503,5172150,5172647,5174017,5174344,5178664 5122588,5170583,5172223,5172740,5174084,5174414,5180912 Gene ID= ENSG00000134108.12 TPM= 59.77 Transcript Type= protein_coding chr3 5187673 5219957 5187673 5219957 + ENST00000256497.8@EDEM1 ENST00000256497.8 protein_coding 5187673,5195209,5199592,5201753,5202966,5205067,5207153,5208093,5210175,5211120,5213319,5215829 5188314,5195281,5199695,5201924,5203149,5205241,5207273,5208263,5210248,5211216,5213522,5219957 Gene ID= ENSG00000134109.10 TPM= 20.83 Transcript Type= protein_coding chr3 8501707 8574673 8501707 8574673 + ENST00000157600.7@LMCD1 ENST00000157600.7 protein_coding 8501707,8532737,8537185,8548568,8565432,8567440 8501980,8532825,8537440,8548903,8565647,8574673 Gene ID= ENSG00000071282.11 TPM= 28.98 Transcript Type= protein_coding chr3 8877076 8963502 8877076 8963502 - ENST00000264926.6@RAD18 ENST00000264926.6 protein_coding 8963335,8958920,8948509,8947220,8941467,8939554,8935871,8913644,8912312,8902380,8898894,8890389,8877076 8963502,8959001,8948570,8947290,8941804,8939653,8936055,8913720,8912372,8902520,8899047,8890451,8881459 Gene ID= ENSG00000070950.9 TPM= 4.53 Transcript Type= protein_coding chr3 8980591 9249379 8980591 9249379 - ENST00000383836.7@SRGAP3 ENST00000383836.7 protein_coding 9248885,9124725,9104680,9080025,9064396,9060231,9058251,9056233,9053027,9047391,9038063,9032650,9026935,9025261,9015597,9013737,9013308,9010308,8994343,8992906,8990512,8980591 9249379,9124917,9104842,9080087,9064581,9060359,9058472,9056334,9053224,9047475,9038090,9032752,9026995,9025338,9015731,9013842,9013535,9010387,8994523,8993055,8990839,8985932 Gene ID= ENSG00000196220.15 TPM= 5.43 Transcript Type= protein_coding chr3 9323981 9363021 9323981 9363021 - transcript75.chr3.nic@SRGAP3 transcript75.chr3.nic protein_coding 9362840,9330528,9323981 9363021,9330596,9326168 Gene ID= ENSG00000196220.15 TPM= 1.81 Transcript Type= NA chr3 9363042 9385704 9363042 9385704 + transcript80.chr3.nic@THUMPD3 transcript80.chr3.nic protein_coding 9363042,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524 9363525,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9385704 Gene ID= ENSG00000134077.15 TPM= 4.07 Transcript Type= NA chr3 9363052 9386791 9363052 9386791 + ENST00000345094.7@THUMPD3 ENST00000345094.7 protein_coding 9363052,9365016,9366908,9371060,9374516,9377819,9380503,9383199,9384212,9384524 9363332,9365320,9366985,9371536,9374646,9377888,9380618,9383309,9384335,9386791 Gene ID= ENSG00000134077.15 TPM= 12.22 Transcript Type= protein_coding chr3 9397621 9430831 9397621 9430831 + transcript93.chr3.nic@SETD5 transcript93.chr3.nic protein_coding 9397621,9424467,9428823,9429827 9397977,9424526,9429009,9430831 Gene ID= ENSG00000168137.15 TPM= 1.81 Transcript Type= NA chr3 9649449 9702387 9649449 9702387 + transcript102.chr3.nnic@MTMR14 transcript102.chr3.nnic protein_coding 9649449,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697752,9701790 9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702387 Gene ID= ENSG00000163719.19 TPM= 4.64 Transcript Type= NA chr3 9649433 9702393 9649433 9702393 + ENST00000353332.9@MTMR14 ENST00000353332.9 protein_coding 9649433,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9701790 9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9702393 Gene ID= ENSG00000163719.19 TPM= 45.69 Transcript Type= protein_coding chr3 9649462 9702392 9649462 9702392 + ENST00000296003.8@MTMR14 ENST00000296003.8 protein_coding 9649462,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9689964,9697711,9701790 9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9690143,9697866,9702392 Gene ID= ENSG00000163719.19 TPM= 54.44 Transcript Type= protein_coding chr3 9649512 9702389 9649512 9702389 + ENST00000351233.9@MTMR14 ENST00000351233.9 protein_coding 9649512,9653621,9662267,9668719,9669432,9671048,9672685,9677317,9677984,9683178,9684585,9684888,9685211,9687821,9688696,9688944,9701790 9649742,9653769,9662375,9668794,9669492,9671170,9672758,9677387,9678058,9683244,9684670,9684964,9685247,9687891,9688754,9689082,9702389 Gene ID= ENSG00000163719.19 TPM= 8.26 Transcript Type= protein_coding chr3 9731745 9748015 9731745 9748015 + ENST00000424362.5@BRPF1 ENST00000424362.5 protein_coding 9731745,9734131,9738999,9740779,9741308,9742025,9742944,9743581,9744224,9745008,9745573,9745812,9746300,9747166 9732138,9734739,9739958,9740941,9741439,9742153,9743253,9743901,9744508,9745155,9745709,9745930,9746454,9748015 Gene ID= ENSG00000156983.15 TPM= 16.3 Transcript Type= protein_coding chr3 9749944 9766737 9749944 9766737 + ENST00000302036.11@OGG1 ENST00000302036.11 protein_coding 9749944,9750945,9751770,9754704,9756471,9756767,9765809 9750423,9751192,9751949,9754885,9756621,9756816,9766737 Gene ID= ENSG00000114026.21 TPM= 9.06 Transcript Type= protein_coding chr3 9749944 9757407 9749944 9757407 + ENST00000302003.11@OGG1 ENST00000302003.11 protein_coding 9749944,9750945,9751770,9754704,9756471,9756767,9757044 9750423,9751192,9751949,9754885,9756621,9756816,9757407 Gene ID= ENSG00000114026.21 TPM= 2.72 Transcript Type= protein_coding chr3 9749981 9757377 9749981 9757377 + ENST00000339511.9@OGG1 ENST00000339511.9 protein_coding 9749981,9750945,9751770,9754704,9756471,9756767 9750423,9751192,9751949,9754885,9756621,9757377 Gene ID= ENSG00000114026.21 TPM= 4.53 Transcript Type= protein_coding chr3 9757342 9769957 9757342 9769957 - transcript134.chr3.nic@CAMK1 transcript134.chr3.nic protein_coding 9769832,9767667,9766125,9765759,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342 9769957,9767781,9766213,9765890,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621 Gene ID= ENSG00000134072.10 TPM= 16.53 Transcript Type= NA chr3 9757342 9769977 9757342 9769977 - ENST00000256460.7@CAMK1 ENST00000256460.7 protein_coding 9769832,9767667,9765759,9763139,9762914,9761631,9761461,9760656,9759672,9759488,9757729,9757342 9769977,9767781,9765890,9763213,9763052,9761757,9761536,9760768,9759750,9759575,9757846,9757621 Gene ID= ENSG00000134072.10 TPM= 175 Transcript Type= protein_coding chr3 9779860 9792747 9779860 9792747 - ENST00000301964.6@TADA3 ENST00000301964.6 protein_coding 9792216,9791260,9789713,9789509,9787199,9787006,9785316,9784028,9779860 9792747,9791493,9789963,9789614,9787340,9787109,9785425,9784213,9780549 Gene ID= ENSG00000171148.13 TPM= 212.96 Transcript Type= protein_coding chr3 9783128 9792736 9783128 9792736 - ENST00000343450.2@TADA3 ENST00000343450.2 protein_coding 9792216,9791260,9789713,9789509,9787199,9787006,9785316,9783128 9792736,9791493,9789963,9789614,9787340,9787109,9785425,9784213 Gene ID= ENSG00000171148.13 TPM= 2.72 Transcript Type= protein_coding chr3 9792484 9807106 9792484 9807106 + transcript179.chr3.nnic@ARPC4 transcript179.chr3.nnic protein_coding 9792484,9797659,9800185,9801661,9803843,9806210 9792560,9797777,9800296,9801756,9804013,9807106 Gene ID= ENSG00000241553.12 TPM= 32.6 Transcript Type= NA chr3 9841258 9844018 9841258 9844018 - transcript199.chr3.nnic@RPUSD3 transcript199.chr3.nnic protein_coding 9843890,9843465,9842199,9841983,9841258 9844018,9843601,9842243,9842082,9841790 Gene ID= ENSG00000156990.14 TPM= 4.53 Transcript Type= NA chr3 9841257 9844059 9841257 9844059 - ENST00000433972.1@RPUSD3 ENST00000433972.1 protein_coding 9843890,9843465,9842199,9841257 9844059,9843601,9842243,9842082 Gene ID= ENSG00000156990.14 TPM= 19.02 Transcript Type= protein_coding chr3 9837849 9844016 9837849 9844016 - ENST00000383820.9@RPUSD3 ENST00000383820.9 protein_coding 9843890,9843465,9842199,9841983,9840698,9840532,9840184,9839032,9837849 9844016,9843601,9842243,9842082,9840805,9840616,9840307,9839171,9838207 Gene ID= ENSG00000156990.14 TPM= 59.77 Transcript Type= protein_coding chr3 9890554 9894349 9890554 9894349 + ENST00000307768.4@JAGN1 ENST00000307768.4 protein_coding 9890554,9892915 9890811,9894349 Gene ID= ENSG00000171135.13 TPM= 78.78 Transcript Type= protein_coding chr3 9917059 9933630 9917059 9933630 + transcript224.chr3.nic@IL17RC transcript224.chr3.nic protein_coding 9917059,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953 9917420,9917734,9918075,9918409,9918609,9920602,9924137,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933630 Gene ID= ENSG00000163702.18 TPM= 7.47 Transcript Type= NA chr3 9917059 9933631 9917059 9933631 + transcript237.chr3.nic@IL17RC transcript237.chr3.nic protein_coding 9917059,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932953 9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9933631 Gene ID= ENSG00000163702.18 TPM= 42.57 Transcript Type= NA chr3 9917074 9933617 9917074 9933617 + ENST00000383812.8@IL17RC ENST00000383812.8 protein_coding 9917074,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953 9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933617 Gene ID= ENSG00000163702.18 TPM= 59.02 Transcript Type= protein_coding chr3 9917119 9933621 9917119 9933621 + ENST00000403601.7@IL17RC ENST00000403601.7 protein_coding 9917119,9917713,9917923,9918335,9918500,9920491,9920925,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953 9917420,9917734,9918075,9918409,9918609,9920602,9920969,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933621 Gene ID= ENSG00000163702.18 TPM= 9.28 Transcript Type= protein_coding chr3 9917098 9933593 9917098 9933593 + ENST00000466046.5@IL17RC ENST00000466046.5 protein_coding 9917098,9917713,9917923,9918335,9918500,9920491,9923881,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953 9917420,9917734,9918075,9918409,9918609,9920602,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933593 Gene ID= ENSG00000163702.18 TPM= 4.53 Transcript Type= retained_intron chr3 9917163 9933617 9917163 9933617 + ENST00000455057.5@IL17RC ENST00000455057.5 protein_coding 9917163,9917713,9917923,9918335,9918500,9920491,9923881,9924232,9928166,9928305,9929852,9930028,9930400,9930895,9932608,9932820,9932953 9917420,9917734,9918075,9918409,9918609,9920602,9924020,9924291,9928220,9928486,9929897,9930149,9930459,9930943,9932703,9932858,9933617 Gene ID= ENSG00000163702.18 TPM= 7.41 Transcript Type= protein_coding chr3 9917098 9933620 9917098 9933620 + ENST00000295981.7@IL17RC ENST00000295981.7 protein_coding 9917098,9917713,9917923,9918335,9918500,9920491,9920925,9923881,9924232,9928166,9928305,9928580,9929852,9930028,9930400,9930895,9932608,9932820,9932953 9917633,9917734,9918075,9918409,9918609,9920602,9920969,9924020,9924291,9928220,9928486,9928630,9929897,9930149,9930459,9930943,9932703,9932858,9933620 Gene ID= ENSG00000163702.18 TPM= 1.13 Transcript Type= protein_coding chr3 9939355 9947281 9939355 9947281 + transcript294.chr3.nnic@CRELD1 transcript294.chr3.nnic protein_coding 9939355,9941362,9946362 9940634,9941491,9947281 Gene ID= ENSG00000163703.17 TPM= 1.81 Transcript Type= NA chr3 9933822 9944994 9933822 9944994 + ENST00000397170.7@CRELD1 ENST00000397170.7 protein_coding 9933822,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365 9933852,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944994 Gene ID= ENSG00000163703.17 TPM= 20.83 Transcript Type= protein_coding chr3 9933845 9944999 9933845 9944999 + ENST00000452070.5@CRELD1 ENST00000452070.5 protein_coding 9933845,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365 9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944999 Gene ID= ENSG00000163703.17 TPM= 47.09 Transcript Type= protein_coding chr3 9933856 9945032 9933856 9945032 + ENST00000326434.9@CRELD1 ENST00000326434.9 protein_coding 9933856,9934420,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9943902,9944365 9933920,9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9944095,9945032 Gene ID= ENSG00000163703.17 TPM= 2.72 Transcript Type= protein_coding chr3 9933840 9945413 9933840 9945413 + ENST00000383811.7@CRELD1 ENST00000383811.7 protein_coding 9933840,9934835,9937562,9938015,9940850,9941111,9942813,9943077,9943381,9944365 9934612,9934917,9937672,9938106,9941026,9941206,9942896,9943172,9943515,9945413 Gene ID= ENSG00000163703.17 TPM= 20.83 Transcript Type= protein_coding chr3 9945542 9952394 9945542 9952394 - ENST00000412055.5@PRRT3 ENST00000412055.5 protein_coding 9952322,9949101,9948758,9945542 9952394,9950172,9948913,9948001 Gene ID= ENSG00000163704.11 TPM= 13.58 Transcript Type= protein_coding chr3 9962682 9986847 9962682 9986847 - transcript298.chr3.nic@EMC3 transcript298.chr3.nic protein_coding 9986507,9981634,9977389,9976957,9974384,9973628,9970582,9969719,9962682 9986847,9981747,9977446,9977050,9974488,9973709,9970661,9969801,9964197 Gene ID= ENSG00000125037.12 TPM= 7.24 Transcript Type= NA chr3 9961656 10011161 9961656 10011161 - transcript299.chr3.nic@EMC3 transcript299.chr3.nic protein_coding 10011023,9986507,9977389,9976957,9974384,9973628,9970582,9969719,9961656 10011161,9986902,9977446,9977050,9974488,9973709,9970661,9969801,9964197 Gene ID= ENSG00000125037.12 TPM= 112.29 Transcript Type= NA chr3 10014238 10026357 10014238 10026357 - ENST00000432401.5@CIDECP ENST00000432401.5 transcribed_unprocessed_pseudogene 10026041,10023560,10014238 10026357,10023747,10015526 Gene ID= ENSG00000186162.10 TPM= 1.81 Transcript Type= processed_transcript chr3 10017497 10026365 10017497 10026365 - ENST00000424691.1@CIDECP ENST00000424691.1 transcribed_unprocessed_pseudogene 10026041,10023560,10017497 10026365,10023747,10018071 Gene ID= ENSG00000186162.10 TPM= 8.15 Transcript Type= processed_transcript chr3 10115592 10127190 10115592 10127190 + ENST00000530758.1@BRK1 ENST00000530758.1 protein_coding 10115592,10125626,10126269 10115819,10125708,10127190 Gene ID= ENSG00000254999.3 TPM= 134.02 Transcript Type= protein_coding chr3 10141008 10152220 10141008 10152220 + ENST00000256474.2@VHL ENST00000256474.2 protein_coding 10141008,10146514,10149787 10142187,10146636,10152220 Gene ID= ENSG00000134086.7 TPM= 11.32 Transcript Type= protein_coding chr3 10142362 10151426 10142362 10151426 + transcript313.chr3.nnic@VHL transcript313.chr3.nnic protein_coding 10142362,10146510,10149780 10143021,10146629,10151426 Gene ID= ENSG00000134086.7 TPM= 3.17 Transcript Type= NA chr3 10141788 10152082 10141788 10152082 + ENST00000345392.2@VHL ENST00000345392.2 protein_coding 10141788,10149787 10142187,10152082 Gene ID= ENSG00000134086.7 TPM= 1.81 Transcript Type= protein_coding chr3 10164865 10243743 10164865 10243743 + ENST00000256458.4@IRAK2 ENST00000256458.4 protein_coding 10164865,10177838,10200369,10209589,10213207,10213484,10216934,10219680,10222636,10226371,10234459,10238748,10242116 10165048,10178020,10200515,10209692,10213401,10213548,10217048,10219789,10222831,10226433,10234659,10239039,10243743 Gene ID= ENSG00000134070.4 TPM= 26.26 Transcript Type= protein_coding chr3 10248023 10281216 10248023 10281216 + ENST00000287652.8@TATDN2 ENST00000287652.8 protein_coding 10248023,10249195,10260137,10270131,10276361,10278279,10278885,10279221 10249067,10249614,10260670,10271015,10276488,10278462,10279034,10281216 Gene ID= ENSG00000157014.10 TPM= 2.72 Transcript Type= protein_coding chr3 10248453 10279174 10248453 10279174 + transcript324.chr3.nic@TATDN2 transcript324.chr3.nic protein_coding 10248453,10249195,10260137,10270131,10276361,10278279,10278885 10249067,10249614,10260670,10271015,10276488,10278462,10279174 Gene ID= ENSG00000157014.10 TPM= 3.62 Transcript Type= NA chr3 10300928 10321112 10300928 10321112 - transcript333.chr3.nic@SEC13 transcript333.chr3.nic protein_coding 10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300928 10321112,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301147 Gene ID= ENSG00000157020.17 TPM= 9.06 Transcript Type= NA chr3 10300932 10321077 10300932 10321077 - transcript335.chr3.nic@SEC13 transcript335.chr3.nic protein_coding 10320509,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300932 10321077,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374 Gene ID= ENSG00000157020.17 TPM= 7.4 Transcript Type= NA chr3 10300931 10321178 10300931 10321178 - ENST00000350697.7@SEC13 ENST00000350697.7 protein_coding 10321050,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931 10321178,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374 Gene ID= ENSG00000157020.17 TPM= 98.86 Transcript Type= protein_coding chr3 10300931 10321082 10300931 10321082 - ENST00000337354.8@SEC13 ENST00000337354.8 protein_coding 10321050,10319139,10318050,10315321,10312579,10311965,10305559,10305033,10304026,10300931 10321082,10319172,10318094,10315436,10312730,10312098,10305692,10305156,10304172,10301374 Gene ID= ENSG00000157020.17 TPM= 3.78 Transcript Type= protein_coding chr3 11192126 11225919 11192126 11225919 + transcript342.chr3.nnic@HRH1 transcript342.chr3.nnic protein_coding 11192126,11194993,11225700 11193887,11195204,11225919 Gene ID= ENSG00000196639.6 TPM= 1.81 Transcript Type= NA chr3 11272399 11557658 11272399 11557658 + transcript344.chr3.nic@ATG7 transcript344.chr3.nic protein_coding 11272399,11282193,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11379972,11426804,11554811 11272430,11282438,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11380052,11426926,11557658 Gene ID= ENSG00000197548.12 TPM= 2.61 Transcript Type= NA chr3 11272375 11477318 11272375 11477318 + transcript347.chr3.nic@ATG7 transcript347.chr3.nic protein_coding 11272375,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11379972,11426804,11477134 11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11380052,11426926,11477318 Gene ID= ENSG00000197548.12 TPM= 1.81 Transcript Type= NA chr3 11272375 11557658 11272375 11557658 + transcript351.chr3.nnic@ATG7 transcript351.chr3.nnic protein_coding 11272375,11298686,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11361310,11362813,11364659,11379972,11426804,11554811 11272430,11298855,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11361427,11362928,11364734,11380052,11426926,11557658 Gene ID= ENSG00000197548.12 TPM= 2.61 Transcript Type= NA chr3 11272375 11557521 11272375 11557521 + transcript354.chr3.nnic@ATG7 transcript354.chr3.nnic protein_coding 11272375,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11358418,11360581,11362813,11364659,11379972,11426804,11554811 11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11358612,11360784,11362928,11364734,11380052,11426926,11557521 Gene ID= ENSG00000197548.12 TPM= 2.61 Transcript Type= NA chr3 11272375 11557521 11272375 11557521 + transcript355.chr3.nic@ATG7 transcript355.chr3.nic protein_coding 11272375,11298686,11299362,11306943,11308984,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11379972,11426804,11554811 11272430,11298855,11299416,11307060,11309061,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11380052,11426926,11557521 Gene ID= ENSG00000197548.12 TPM= 2.61 Transcript Type= NA chr3 11272416 11557665 11272416 11557665 + ENST00000354449.7@ATG7 ENST00000354449.7 protein_coding 11272416,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11379972,11426804,11554811 11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11380052,11426926,11557665 Gene ID= ENSG00000197548.12 TPM= 44.26 Transcript Type= protein_coding chr3 11272416 11555083 11272416 11555083 + ENST00000354956.9@ATG7 ENST00000354956.9 protein_coding 11272416,11298686,11299362,11306943,11308984,11313304,11315344,11331340,11332972,11340645,11342135,11347877,11358418,11360581,11362813,11364659,11426804,11554811 11272430,11298855,11299416,11307060,11309061,11313420,11315493,11331428,11333093,11340735,11342279,11348035,11358612,11360784,11362928,11364734,11426926,11555083 Gene ID= ENSG00000197548.12 TPM= 1.81 Transcript Type= protein_coding chr3 11556070 11719675 11556070 11719675 - transcript357.chr3.nnic@VGLL4 transcript357.chr3.nnic protein_coding 11719417,11702971,11601833,11564797,11559332,11558499,11556070 11719675,11703047,11602022,11565019,11559455,11558827,11556591 Gene ID= ENSG00000144560.14 TPM= 6.34 Transcript Type= NA chr3 11556068 11719675 11556068 11719675 - transcript358.chr3.nic@VGLL4 transcript358.chr3.nic protein_coding 11719417,11702971,11601833,11564797,11559332,11556068 11719675,11703047,11602022,11565019,11559455,11558827 Gene ID= ENSG00000144560.14 TPM= 40.94 Transcript Type= NA chr3 11556070 11720746 11556070 11720746 - ENST00000273038.7@VGLL4 ENST00000273038.7 protein_coding 11720394,11702971,11601833,11564797,11559332,11556070 11720746,11703047,11602022,11565019,11559455,11558827 Gene ID= ENSG00000144560.14 TPM= 28.26 Transcript Type= protein_coding chr3 12151522 12158915 12151522 12158915 - transcript380.chr3.nnic@TIMP4 transcript380.chr3.nnic protein_coding 12158702,12157407,12156820,12154327,12151522 12158915,12157482,12156934,12154451,12153712 Gene ID= ENSG00000157150.4 TPM= 1.81 Transcript Type= NA chr3 12287860 12434344 12287860 12434344 + ENST00000309576.10@PPARG ENST00000309576.10 protein_coding 12287860,12312380,12379704,12381322,12392614,12405882,12416704,12433898 12288020,12312453,12379931,12381491,12392752,12406081,12417154,12434344 Gene ID= ENSG00000132170.19 TPM= 4.53 Transcript Type= protein_coding chr3 12288838 12434344 12288838 12434344 + ENST00000397012.6@PPARG ENST00000397012.6 protein_coding 12288838,12312380,12379704,12381322,12392614,12405882,12416704,12433898 12289134,12312453,12379931,12381491,12392752,12406081,12417154,12434344 Gene ID= ENSG00000132170.19 TPM= 1.81 Transcript Type= protein_coding chr3 12484480 12533312 12484480 12533312 + transcript387.chr3.nic@TSEN2 transcript387.chr3.nic protein_coding 12484480,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12532662 12484517,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12533312 Gene ID= ENSG00000154743.17 TPM= 3.62 Transcript Type= NA chr3 12484480 12539629 12484480 12539629 + transcript388.chr3.nic@TSEN2 transcript388.chr3.nic protein_coding 12484480,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12539161 12484517,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12539629 Gene ID= ENSG00000154743.17 TPM= 2.72 Transcript Type= NA chr3 12484491 12533317 12484491 12533317 + ENST00000402228.7@TSEN2 ENST00000402228.7 protein_coding 12484491,12489784,12492136,12496518,12503262,12505154,12516611,12519059,12528888,12529762,12531570,12532662 12484628,12489989,12492217,12496554,12503784,12505231,12516661,12519197,12528924,12529873,12531659,12533317 Gene ID= ENSG00000154743.17 TPM= 1.81 Transcript Type= protein_coding chr3 12557014 12583713 12557014 12583713 + ENST00000170447.11@MKRN2 ENST00000170447.11 protein_coding 12557014,12568875,12570071,12572069,12574792,12576631,12581808,12582116 12557176,12569003,12570252,12572373,12575006,12576741,12581952,12583713 Gene ID= ENSG00000075975.15 TPM= 54.33 Transcript Type= protein_coding chr3 12583603 12664183 12583603 12664183 - transcript399.chr3.nic@RAF1 transcript399.chr3.nic protein_coding 12663813,12618515,12611950,12609233,12608766,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583603 12664183,12618747,12612062,12609335,12608923,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657 Gene ID= ENSG00000132155.11 TPM= 14.49 Transcript Type= NA chr3 12583601 12664226 12583601 12664226 - ENST00000251849.8@RAF1 ENST00000251849.8 protein_coding 12663813,12618515,12611950,12609233,12608766,12606201,12604136,12600388,12600152,12599691,12591708,12590798,12587591,12585681,12585122,12584847,12583601 12664226,12618747,12612062,12609335,12608923,12606299,12604289,12600415,12600279,12599808,12591792,12590974,12587637,12585799,12585253,12584981,12584657 Gene ID= ENSG00000132155.11 TPM= 68.82 Transcript Type= protein_coding chr3 12796680 12834803 12796680 12834803 + ENST00000456430.6@CAND2 ENST00000456430.6 protein_coding 12796680,12803488,12807306,12808210,12810059,12812990,12813246,12815141,12815867,12816374,12820086,12825470,12827440,12831465,12833755 12796788,12803631,12807460,12808333,12810324,12813095,12813388,12815433,12816008,12817876,12820181,12825639,12827604,12831572,12834803 Gene ID= ENSG00000144712.11 TPM= 18.11 Transcript Type= protein_coding chr3 12834485 12841588 12834485 12841588 - ENST00000429711.6@RPL32 ENST00000429711.6 protein_coding 12841494,12840142,12839349,12834485 12841588,12840242,12839530,12836223 Gene ID= ENSG00000144713.12 TPM= 562.19 Transcript Type= protein_coding chr3 12834946 12841582 12834946 12841582 - ENST00000396957.5@RPL32 ENST00000396957.5 protein_coding 12841494,12840142,12839349,12834946 12841582,12840341,12839530,12836223 Gene ID= ENSG00000144713.12 TPM= 8.9 Transcript Type= protein_coding chr3 12836050 12841545 12836050 12841545 - ENST00000435983.5@RPL32 ENST00000435983.5 protein_coding 12841494,12840142,12839349,12836050 12841545,12840353,12839530,12836223 Gene ID= ENSG00000144713.12 TPM= 6.64 Transcript Type= protein_coding chr3 12897221 13019493 12897221 13019493 - transcript418.chr3.nnic@IQSEC1 transcript418.chr3.nnic protein_coding 13019150,12941571,12935448,12924581,12922120,12920430,12915594,12915104,12913428,12911629,12909273,12908349,12897221 13019493,12941865,12936697,12924742,12922242,12920596,12915733,12915133,12913553,12911728,12909434,12908525,12899434 Gene ID= ENSG00000144711.13 TPM= 8.15 Transcript Type= NA chr3 13316235 13420309 13316235 13420309 - ENST00000254508.6@NUP210 ENST00000254508.6 protein_coding 13420060,13399725,13397357,13391211,13388303,13386275,13379563,13378912,13377456,13376291,13375504,13373718,13371834,13365946,13360270,13358222,13353915,13353554,13352080,13351879,13343175,13341996,13341748,13340236,13339854,13337837,13336787,13335454,13332293,13330460,13328771,13327217,13325795,13323309,13322193,13321585,13319763,13319230,13319072,13316235 13420309,13399861,13397488,13391307,13388453,13386407,13379721,13378980,13377562,13376431,13375641,13373873,13372032,13366091,13360491,13358395,13354107,13353660,13352184,13351980,13343303,13342123,13341883,13340298,13340033,13337917,13336918,13335612,13332384,13330634,13328946,13327437,13325931,13323432,13322339,13321835,13319979,13319325,13319155,13317781 Gene ID= ENSG00000132182.11 TPM= 6.34 Transcript Type= protein_coding chr3 13480324 13506421 13480324 13506421 + transcript429.chr3.nic@HDAC11 transcript429.chr3.nic protein_coding 13480324,13481246,13483464,13496736,13498513,13500713,13501871,13502884,13504094,13504468 13480446,13481394,13483564,13496852,13498555,13500789,13501933,13502980,13504272,13506421 Gene ID= ENSG00000163517.14 TPM= 25.36 Transcript Type= NA chr3 13549131 13638422 13549131 13638422 + ENST00000404922.7@FBLN2 ENST00000404922.7 protein_coding 13549131,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13621775,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562 13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13621915,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422 Gene ID= ENSG00000163520.13 TPM= 2.72 Transcript Type= protein_coding chr3 13549181 13638422 13549181 13638422 + ENST00000295760.11@FBLN2 ENST00000295760.11 protein_coding 13549181,13570315,13608062,13609513,13613984,13618076,13618904,13619730,13626445,13627832,13628905,13629164,13629820,13630699,13631329,13636445,13637562 13549208,13571661,13608173,13609642,13614164,13618285,13619017,13619831,13626579,13627969,13629048,13629292,13629945,13630815,13631457,13636568,13638422 Gene ID= ENSG00000163520.13 TPM= 6.34 Transcript Type= protein_coding chr3 14112077 14124870 14112077 14124870 - ENST00000295767.9@CHCHD4 ENST00000295767.9 protein_coding 14124655,14121917,14116426,14112077 14124870,14122086,14116524,14113194 Gene ID= ENSG00000163528.12 TPM= 2.26 Transcript Type= protein_coding chr3 14112093 14124858 14112093 14124858 - ENST00000396914.3@CHCHD4 ENST00000396914.3 protein_coding 14124655,14116426,14112093 14124858,14116524,14113194 Gene ID= ENSG00000163528.12 TPM= 21.28 Transcript Type= protein_coding chr3 14124940 14143679 14124940 14143679 + ENST00000306077.4@TMEM43 ENST00000306077.4 protein_coding 14124940,14129412,14130822,14131580,14132546,14132866,14133739,14134770,14135158,14135807,14139180,14141593 14125205,14129561,14130956,14131674,14132595,14132935,14133809,14134891,14135232,14135908,14139297,14143679 Gene ID= ENSG00000170876.7 TPM= 201.94 Transcript Type= protein_coding chr3 14145147 14178783 14145147 14178783 - ENST00000285021.11@XPC ENST00000285021.11 protein_coding 14178466,14172867,14170438,14168257,14167169,14165428,14164813,14159741,14158011,14156335,14152335,14148814,14148562,14147908,14147290,14145147 14178783,14173062,14170550,14168380,14167253,14165585,14164933,14159830,14158892,14156495,14152416,14148948,14148731,14148001,14147379,14146159 Gene ID= ENSG00000154767.14 TPM= 91.46 Transcript Type= protein_coding chr3 14178358 14201119 14178358 14201119 + ENST00000306024.3@LSM3 ENST00000306024.3 protein_coding 14178358,14181560,14183937,14198036 14178881,14181670,14184032,14201119 Gene ID= ENSG00000170860.3 TPM= 51.62 Transcript Type= protein_coding chr3 14402576 14489347 14402576 14489347 + ENST00000622186.4@SLC6A6 ENST00000622186.4 protein_coding 14402576,14416412,14443624,14445717,14447582,14457950,14466516,14467853,14468088,14472205,14477205,14478466,14479085,14481671,14484867 14402847,14416453,14443863,14445851,14447816,14458082,14466650,14467956,14468212,14472317,14477342,14478568,14479185,14481841,14489347 Gene ID= ENSG00000131389.16 TPM= 40.75 Transcript Type= protein_coding chr3 14651735 14671200 14651735 14671200 + transcript474.chr3.nic@CCDC174 transcript474.chr3.nic protein_coding 14651735,14654426,14655529,14658871,14661530,14665028,14666805,14669934,14670896 14651878,14654530,14655629,14658929,14661707,14665123,14668181,14670086,14671200 Gene ID= ENSG00000154781.15 TPM= 1.81 Transcript Type= NA chr3 14651764 14672659 14651764 14672659 + ENST00000383794.6@CCDC174 ENST00000383794.6 protein_coding 14651764,14654426,14655529,14658871,14661530,14665028,14666805,14667424,14668049,14669934,14670896 14651878,14654530,14655629,14658929,14661707,14665123,14666947,14667518,14668181,14670086,14672659 Gene ID= ENSG00000154781.15 TPM= 16.3 Transcript Type= protein_coding chr3 14810544 14934570 14810544 14934570 + transcript476.chr3.nic@FGD5 transcript476.chr3.nic protein_coding 14810544,14818956,14864128,14880572,14880742,14897509,14897939,14898739,14900403,14901003,14907640,14910861,14917249,14918754,14921918,14922411,14923046,14924008,14926070,14932577,14933131 14810865,14821596,14864260,14880630,14880772,14897669,14898095,14898826,14900453,14901061,14907711,14910929,14917332,14918833,14922017,14922548,14923175,14924138,14926198,14932731,14934570 Gene ID= ENSG00000154783.11 TPM= 14.49 Transcript Type= NA chr3 14942784 14947507 14942784 14947507 - ENST00000424349.1@FGD5-AS1 ENST00000424349.1 antisense_RNA 14947087,14942784 14947507,14946154 Gene ID= ENSG00000225733.5 TPM= 47.09 Transcript Type= antisense_RNA chr3 15042405 15065317 15042405 15065317 - transcript488.chr3.nic@MRPS25 transcript488.chr3.nic protein_coding 15065061,15059369,15053380,15049708,15042405 15065317,15059475,15053467,15052633,15043022 Gene ID= ENSG00000131368.7 TPM= 3.17 Transcript Type= NA chr3 15048542 15065317 15048542 15065317 - transcript492.chr3.nnic@MRPS25 transcript492.chr3.nnic protein_coding 15065061,15059369,15048542 15065317,15059475,15049935 Gene ID= ENSG00000131368.7 TPM= 1.81 Transcript Type= NA chr3 15048518 15065335 15048518 15065335 - ENST00000253686.6@MRPS25 ENST00000253686.6 protein_coding 15065061,15059369,15053380,15048518 15065335,15059475,15053467,15052633 Gene ID= ENSG00000131368.7 TPM= 50.26 Transcript Type= protein_coding chr3 15070073 15099148 15070073 15099148 - ENST00000253699.7@RBSN ENST00000253699.7 protein_coding 15099035,15098119,15096535,15095973,15090399,15085861,15085000,15084735,15082367,15080732,15078075,15077062,15075606,15070073 15099148,15098274,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15080802,15078161,15077164,15075710,15074930 Gene ID= ENSG00000131381.12 TPM= 5.43 Transcript Type= protein_coding chr3 15070072 15099141 15070072 15099141 - transcript498.chr3.nnic@RBSN transcript498.chr3.nnic protein_coding 15099035,15096535,15095973,15090399,15085861,15085000,15084735,15082377,15070072 15099141,15096710,15096288,15090539,15085961,15085045,15084896,15082608,15073240 Gene ID= ENSG00000131381.12 TPM= 1.81 Transcript Type= NA chr3 15206228 15252302 15206228 15252302 + transcript502.chr3.nic@CAPN7 transcript502.chr3.nic protein_coding 15206228,15210802,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116 15206597,15210922,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252302 Gene ID= ENSG00000131375.9 TPM= 3.17 Transcript Type= NA chr3 15206201 15252302 15206201 15252302 + transcript505.chr3.nic@CAPN7 transcript505.chr3.nic protein_coding 15206201,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15245526,15246732,15247327,15250931,15251116 15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15245671,15246794,15247457,15251023,15252302 Gene ID= ENSG00000131375.9 TPM= 6.79 Transcript Type= NA chr3 15206201 15252301 15206201 15252301 + transcript506.chr3.nnic@CAPN7 transcript506.chr3.nnic protein_coding 15206201,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15242178,15246732,15247327,15250931,15251116 15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15242253,15246794,15247457,15251023,15252301 Gene ID= ENSG00000131375.9 TPM= 4.07 Transcript Type= NA chr3 15206243 15252918 15206243 15252918 + ENST00000253693.6@CAPN7 ENST00000253693.6 protein_coding 15206243,15212104,15217425,15218473,15220781,15223475,15227839,15228974,15230442,15232519,15233867,15235025,15240473,15240754,15241453,15242178,15245526,15246732,15247327,15250931,15251116 15206597,15212212,15217582,15218540,15220981,15223561,15227965,15229059,15230535,15232665,15233973,15235145,15240617,15240853,15241588,15242253,15245671,15246794,15247457,15251023,15252918 Gene ID= ENSG00000131375.9 TPM= 35.77 Transcript Type= protein_coding chr3 15254853 15332629 15254853 15332629 - ENST00000383791.7@SH3BP5 ENST00000383791.7 protein_coding 15332271,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853 15332629,15330566,15304231,15269877,15262289,15259803,15259050,15257113,15256303 Gene ID= ENSG00000131370.15 TPM= 231.97 Transcript Type= protein_coding chr3 15254853 15333263 15254853 15333263 - transcript518.chr3.nic@SH3BP5 transcript518.chr3.nic protein_coding 15333088,15330504,15304103,15269713,15262159,15259761,15258831,15256853,15254853 15333263,15330566,15304231,15269877,15262289,15259803,15259050,15257113,15256303 Gene ID= ENSG00000131370.15 TPM= 8.3 Transcript Type= NA chr3 15410108 15427545 15410108 15427545 - transcript531.chr3.nic@METTL6 transcript531.chr3.nic protein_coding 15427402,15426287,15424955,15415772,15415498,15414021,15410108 15427545,15426635,15425089,15415942,15415583,15414162,15411437 Gene ID= ENSG00000206562.11 TPM= 3.62 Transcript Type= NA chr3 15413671 15427545 15413671 15427545 - transcript533.chr3.nic@METTL6 transcript533.chr3.nic protein_coding 15427402,15426287,15424955,15415772,15415498,15413671 15427545,15426635,15425089,15415942,15415583,15413945 Gene ID= ENSG00000206562.11 TPM= 4.53 Transcript Type= NA chr3 15427355 15442613 15427355 15442613 + ENST00000396842.6@EAF1 ENST00000396842.6 protein_coding 15427355,15429913,15432087,15434348,15436342,15439109 15427882,15430007,15432223,15434538,15436575,15442613 Gene ID= ENSG00000144597.13 TPM= 7.24 Transcript Type= protein_coding chr3 15560706 15601816 15560706 15601816 - transcript548.chr3.nic@HACL1 transcript548.chr3.nic protein_coding 15601383,15601090,15596384,15591600,15589540,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560706 15601816,15601194,15596424,15591680,15589612,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897 Gene ID= ENSG00000131373.14 TPM= 4.53 Transcript Type= NA chr3 15560771 15601568 15560771 15601568 - transcript549.chr3.nnic@HACL1 transcript549.chr3.nnic protein_coding 15601383,15601090,15596384,15591600,15589540,15586525,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560771 15601568,15601194,15596424,15591680,15589612,15586602,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897 Gene ID= ENSG00000131373.14 TPM= 1.81 Transcript Type= NA chr3 15560706 15601569 15560706 15601569 - transcript554.chr3.nic@HACL1 transcript554.chr3.nic protein_coding 15601383,15601090,15596384,15591600,15589540,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560706 15601569,15601194,15596424,15591680,15589612,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897 Gene ID= ENSG00000131373.14 TPM= 3.62 Transcript Type= NA chr3 15560746 15601587 15560746 15601587 - ENST00000451445.6@HACL1 ENST00000451445.6 protein_coding 15601383,15601090,15596384,15591600,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560746 15601587,15601194,15596424,15591680,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897 Gene ID= ENSG00000131373.14 TPM= 3.62 Transcript Type= protein_coding chr3 15560747 15601569 15560747 15601569 - ENST00000456194.6@HACL1 ENST00000456194.6 protein_coding 15601383,15601090,15596384,15589540,15586525,15585248,15582877,15579910,15574977,15573159,15571668,15568432,15567844,15564551,15563358,15560747 15601569,15601194,15596424,15589612,15586602,15585342,15582989,15580045,15575082,15573242,15571769,15568586,15568002,15564658,15563544,15560897 Gene ID= ENSG00000131373.14 TPM= 1.81 Transcript Type= protein_coding chr3 15601728 15642241 15601728 15642241 + transcript563.chr3.nic@BTD transcript563.chr3.nic protein_coding 15601728,15635424,15641908 15601770,15635688,15642241 Gene ID= ENSG00000169814.12 TPM= 2.72 Transcript Type= NA chr3 15601745 15643123 15601745 15643123 + transcript564.chr3.nic@BTD transcript564.chr3.nic protein_coding 15601745,15635424,15641908 15601894,15635688,15643123 Gene ID= ENSG00000169814.12 TPM= 11.77 Transcript Type= NA chr3 15601742 15645822 15601742 15645822 + ENST00000303498.9@BTD ENST00000303498.9 protein_coding 15601742,15635424,15641908,15644316 15601894,15635688,15642057,15645822 Gene ID= ENSG00000169814.12 TPM= 41.66 Transcript Type= protein_coding chr3 15667241 15859675 15667241 15859675 - transcript536.chr3.nic@ANKRD28 transcript536.chr3.nic protein_coding 15859377,15814240,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667241 15859675,15814309,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556 Gene ID= ENSG00000206560.11 TPM= 2.49 Transcript Type= NA chr3 15667241 15797981 15667241 15797981 - transcript539.chr3.nic@ANKRD28 transcript539.chr3.nic protein_coding 15796405,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667241 15797981,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556 Gene ID= ENSG00000206560.11 TPM= 3.85 Transcript Type= NA chr3 15667241 15797981 15667241 15797981 - transcript541.chr3.nic@ANKRD28 transcript541.chr3.nic protein_coding 15796405,15795223,15766234,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667241 15797981,15795306,15766312,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556 Gene ID= ENSG00000206560.11 TPM= 5.66 Transcript Type= NA chr3 15667236 15859771 15667236 15859771 - ENST00000399451.6@ANKRD28 ENST00000399451.6 protein_coding 15859377,15795223,15766234,15751750,15737033,15735410,15724382,15720915,15714578,15713527,15712140,15711211,15709668,15707924,15696134,15695188,15694739,15690019,15686222,15686002,15685226,15679476,15679301,15678209,15677480,15676974,15675898,15667236 15859771,15795306,15766312,15751820,15737233,15735497,15724524,15721127,15714656,15713641,15712222,15711274,15709736,15708064,15696245,15695214,15694813,15690220,15686309,15686119,15685445,15679563,15679384,15678354,15677562,15677056,15675989,15670556 Gene ID= ENSG00000206560.11 TPM= 5.21 Transcript Type= protein_coding chr3 16174681 16229745 16174681 16229745 + transcript568.chr3.nic@GALNT15 transcript568.chr3.nic protein_coding 16174681,16195760,16200619,16208503,16211124,16212569,16219403,16219910,16222615,16227354 16175690,16195957,16200823,16208670,16211241,16212763,16219534,16220014,16222758,16229745 Gene ID= ENSG00000131386.17 TPM= 1.81 Transcript Type= NA chr3 16174629 16229036 16174629 16229036 + transcript569.chr3.nnic@GALNT15 transcript569.chr3.nnic protein_coding 16174629,16195760,16208503,16211124,16212569,16219403,16219910,16222615,16227354 16175690,16195957,16208670,16211241,16212763,16219534,16220014,16222758,16229036 Gene ID= ENSG00000131386.17 TPM= 1.81 Transcript Type= NA chr3 16174649 16229746 16174649 16229746 + ENST00000339732.9@GALNT15 ENST00000339732.9 protein_coding 16174649,16195760,16200619,16208503,16211124,16212569,16219403,16219910,16222615,16227354 16175690,16195926,16200823,16208670,16211241,16212763,16219534,16220014,16222758,16229746 Gene ID= ENSG00000131386.17 TPM= 34.41 Transcript Type= protein_coding chr3 16257978 16264972 16257978 16264972 - ENST00000488423.1@DPH3 ENST00000488423.1 protein_coding 16264769,16264155,16257978 16264972,16264229,16260829 Gene ID= ENSG00000154813.9 TPM= 27.62 Transcript Type= protein_coding chr3 16257979 16264969 16257979 16264969 - ENST00000383775.4@DPH3 ENST00000383775.4 protein_coding 16264769,16257979 16264969,16260829 Gene ID= ENSG00000154813.9 TPM= 14.94 Transcript Type= protein_coding chr3 16265191 16303601 16265191 16303601 + transcript576.chr3.nnic@OXNAD1 transcript576.chr3.nnic protein_coding 16265191,16269126,16270945,16271659,16272248,16286342,16294856,16301626,16302640,16303408 16265505,16269275,16271071,16271722,16272321,16286448,16294997,16301868,16302748,16303601 Gene ID= ENSG00000154814.13 TPM= 1.81 Transcript Type= NA chr3 16265199 16306087 16265199 16306087 + ENST00000285083.9@OXNAD1 ENST00000285083.9 protein_coding 16265199,16269126,16270945,16271659,16286342,16294856,16301626,16302640,16303408 16265505,16269275,16271071,16271722,16286448,16294997,16301868,16302748,16306087 Gene ID= ENSG00000154814.13 TPM= 9.06 Transcript Type= protein_coding chr3 16315856 16513706 16315856 16513706 - ENST00000334133.8@RFTN1 ENST00000334133.8 protein_coding 16513442,16493725,16433851,16409375,16377718,16370076,16357932,16326773,16323376,16315856 16513706,16493877,16434037,16409483,16378102,16370279,16358047,16326876,16323457,16317232 Gene ID= ENSG00000131378.13 TPM= 21.73 Transcript Type= protein_coding chr3 16884232 17091326 16884232 17091326 + transcript586.chr3.nnic@PLCL2 transcript586.chr3.nnic protein_coding 16884232,16884822,17009674,17014708,17042874,17067956,17089733 16884536,16885366,17012160,17014911,17042949,17068065,17091326 Gene ID= ENSG00000154822.17 TPM= 10.03 Transcript Type= NA chr3 16884513 17091326 16884513 17091326 + transcript587.chr3.nnic@PLCL2 transcript587.chr3.nnic protein_coding 16884513,16884822,17009674,17014708,17042874,17067956,17089733 16884638,16885366,17012160,17014911,17042949,17068065,17091326 Gene ID= ENSG00000154822.17 TPM= 3.69 Transcript Type= NA chr3 16884977 17091326 16884977 17091326 + transcript590.chr3.nnic@PLCL2 transcript590.chr3.nnic protein_coding 16884977,16937555,17009674,17014708,17042874,17067956,17089733 16885366,16937658,17012160,17014911,17042949,17068065,17091326 Gene ID= ENSG00000154822.17 TPM= 5.51 Transcript Type= NA chr3 16884959 17090594 16884959 17090594 + ENST00000615277.4@PLCL2 ENST00000615277.4 protein_coding 16884959,17009674,17014708,17042874,17067956,17089733 16885366,17012160,17014911,17042949,17068065,17090594 Gene ID= ENSG00000154822.17 TPM= 64.97 Transcript Type= protein_coding chr3 16882709 16885129 16882709 16885129 - transcript592.chr3.nnic@NA transcript592.chr3.nnic NA 16884633,16883841,16883406,16882709 16885129,16884030,16883570,16883264 Gene ID= novel_gene_chr3_593 TPM= 2.72 Transcript Type= NA chr3 16882709 16885557 16882709 16885557 - transcript594.chr3.nnic@NA transcript594.chr3.nnic NA 16883841,16883406,16882709 16885557,16883570,16883264 Gene ID= novel_gene_chr3_595 TPM= 1.81 Transcript Type= NA chr3 17157165 17742631 17157165 17742631 - transcript601.chr3.nic@TBC1D5 transcript601.chr3.nic protein_coding 17742481,17623849,17508474,17428450,17406418,17404872,17404694,17403181,17383913,17376525,17374629,17374471,17372075,17307992,17291895,17258506,17238163,17214207,17185109,17167749,17166767,17157165 17742631,17623913,17508605,17428519,17406526,17404961,17404768,17403248,17384015,17376613,17374679,17374540,17372247,17308134,17292001,17258591,17238419,17214370,17185208,17167828,17166928,17161256 Gene ID= ENSG00000131374.14 TPM= 21.73 Transcript Type= NA chr3 18345387 18425337 18345387 18425337 - ENST00000338745.10@SATB1 ENST00000338745.10 protein_coding 18423627,18420757,18416902,18416007,18415111,18397179,18394462,18386399,18378170,18351992,18345387 18425337,18420991,18417078,18416133,18415234,18397290,18394916,18386611,18378325,18352195,18349682 Gene ID= ENSG00000182568.16 TPM= 15.39 Transcript Type= protein_coding chr3 19879476 19947009 19879476 19947009 - transcript611.chr3.nnic@EFHB transcript611.chr3.nnic protein_coding 19946919,19936141,19920505,19919833,19918232,19915303,19905620,19899432,19898778,19896687,19888444,19884403,19882550,19879476 19947009,19936334,19920567,19919976,19918412,19915413,19905749,19899515,19898845,19896841,19888651,19884615,19882731,19879804 Gene ID= ENSG00000163576.17 TPM= 3.62 Transcript Type= NA chr3 19945914 19947025 19945914 19947025 - ENST00000474780.1@EFHB ENST00000474780.1 protein_coding 19946919,19945914 19947025,19946254 Gene ID= ENSG00000163576.17 TPM= 1.81 Transcript Type= processed_transcript chr3 19947061 19985173 19947061 19985173 + transcript615.chr3.nnic@RAB5A transcript615.chr3.nnic protein_coding 19947061,19950806,19975601,19976047,19978310,19979004,19983708 19947521,19951061,19975752,19976169,19978403,19979119,19985173 Gene ID= ENSG00000144566.10 TPM= 2.72 Transcript Type= NA chr3 19947079 19985175 19947079 19985175 + ENST00000273047.8@RAB5A ENST00000273047.8 protein_coding 19947079,19950806,19975601,19976047,19978310,19983708 19947521,19951061,19975752,19976169,19978403,19985175 Gene ID= ENSG00000144566.10 TPM= 57.05 Transcript Type= protein_coding chr3 20040023 20154404 20040023 20154404 + ENST00000263754.4@KAT2B ENST00000263754.4 protein_coding 20040023,20072333,20095263,20099862,20101287,20111596,20114882,20119598,20122668,20125905,20127423,20136942,20140221,20146316,20147963,20148243,20148403,20152332 20040780,20072459,20095408,20099954,20101468,20111787,20114988,20119723,20122804,20126113,20127549,20137052,20140364,20146430,20147999,20148306,20148487,20154404 Gene ID= ENSG00000114166.7 TPM= 1.81 Transcript Type= protein_coding chr3 23203126 23218480 23203126 23218480 + transcript624.chr3.nic@UBE2E2 transcript624.chr3.nic protein_coding 23203126,23208692,23217262 23203262,23208875,23218480 Gene ID= ENSG00000182247.9 TPM= 1.81 Transcript Type= NA chr3 23203293 23591793 23203293 23591793 + ENST00000396703.5@UBE2E2 ENST00000396703.5 protein_coding 23203293,23208692,23217262,23499608,23532554,23589734 23203464,23208875,23217312,23499740,23532701,23591793 Gene ID= ENSG00000182247.9 TPM= 38.94 Transcript Type= protein_coding chr3 23805903 23891316 23805903 23891316 + ENST00000306627.7@UBE2E1 ENST00000306627.7 protein_coding 23805903,23807237,23811460,23887567,23889112,23890509 23806088,23807421,23811510,23887699,23889259,23891316 Gene ID= ENSG00000170142.11 TPM= 3.62 Transcript Type= protein_coding chr3 23892081 23917065 23892081 23917065 - ENST00000425478.6@NKIRAS1 ENST00000425478.6 protein_coding 23916784,23911329,23910811,23900808,23892081 23917065,23911450,23910921,23901049,23893337 Gene ID= ENSG00000197885.10 TPM= 10.87 Transcript Type= protein_coding chr3 23916545 23920977 23916545 23920977 + ENST00000307839.9@RPL15 ENST00000307839.9 protein_coding 23916545,23917850,23918440,23919196 23917173,23918031,23918576,23920977 Gene ID= ENSG00000174748.18 TPM= 970.29 Transcript Type= protein_coding chr3 23917131 23920820 23917131 23920820 + ENST00000413699.5@RPL15 ENST00000413699.5 protein_coding 23917131,23917850,23918440,23919196 23917239,23918031,23918576,23920820 Gene ID= ENSG00000174748.18 TPM= 129.95 Transcript Type= protein_coding chr3 23917148 23919552 23917148 23919552 + ENST00000465786.1@RPL15 ENST00000465786.1 protein_coding 23917148,23917850 23917173,23919552 Gene ID= ENSG00000174748.18 TPM= 19.92 Transcript Type= retained_intron chr3 23945260 23980618 23945260 23980618 + ENST00000312521.8@NR1D2 ENST00000312521.8 protein_coding 23945260,23954537,23956037,23959671,23961977,23964977,23967813,23977223 23945594,23954803,23956125,23959815,23962605,23965162,23968023,23980618 Gene ID= ENSG00000174738.12 TPM= 39.84 Transcript Type= protein_coding chr3 24119003 24494850 24119003 24494850 - transcript641.chr3.nic@THRB transcript641.chr3.nic protein_coding 24494795,24337300,24228938,24190074,24152390,24146675,24143501,24133316,24127499,24119003 24494850,24337371,24229001,24190334,24152490,24146822,24143706,24133462,24127757,24123125 Gene ID= ENSG00000151090.17 TPM= 4.53 Transcript Type= NA chr3 25428311 25597932 25428311 25597932 + ENST00000330688.8@RARB ENST00000330688.8 protein_coding 25428311,25461193,25501182,25569758,25580546,25593503,25594520,25596420 25428888,25461341,25501323,25569918,25580722,25593707,25594678,25597932 Gene ID= ENSG00000077092.18 TPM= 9.96 Transcript Type= protein_coding chr3 25718945 25783447 25718945 25783447 - transcript657.chr3.nic@NGLY1 transcript657.chr3.nic protein_coding 25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25729133,25720014,25718945 25783447,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25729318,25720191,25719635 Gene ID= ENSG00000151092.16 TPM= 6.34 Transcript Type= NA chr3 25719142 25783441 25719142 25783441 - transcript660.chr3.nic@NGLY1 transcript660.chr3.nic protein_coding 25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25729133,25719142 25783441,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25729318,25719635 Gene ID= ENSG00000151092.16 TPM= 9.06 Transcript Type= NA chr3 25719271 25783438 25719271 25783438 - ENST00000396649.7@NGLY1 ENST00000396649.7 protein_coding 25783260,25778574,25764066,25751098,25739577,25737334,25736004,25733872,25732319,25729133,25719271 25783438,25778688,25764311,25751263,25739799,25737455,25736149,25733982,25732483,25729318,25719635 Gene ID= ENSG00000151092.16 TPM= 15.39 Transcript Type= protein_coding chr3 25790080 25794534 25790080 25794534 + ENST00000280701.7@OXSM ENST00000280701.7 protein_coding 25790080,25790990,25794092 25790147,25791997,25794534 Gene ID= ENSG00000151093.7 TPM= 18.11 Transcript Type= protein_coding chr3 27372723 27424086 27372723 27424086 - ENST00000419036.5@SLC4A7 ENST00000419036.5 protein_coding 27424037,27420700,27418486,27411642,27409356,27404830,27403139,27400764,27398192,27397684,27394954,27394518,27391740,27389931,27385892,27383153,27379249,27372723 27424086,27420787,27418632,27411748,27409530,27404963,27403384,27400869,27398353,27397797,27395115,27394769,27391808,27390104,27386023,27383250,27379356,27376845 Gene ID= ENSG00000033867.16 TPM= 3.62 Transcript Type= protein_coding chr3 28241618 28319771 28241618 28319771 + ENST00000423894.5@CMC1 ENST00000423894.5 protein_coding 28241618,28316333,28319509 28241812,28316423,28319771 Gene ID= ENSG00000187118.12 TPM= 16.3 Transcript Type= protein_coding chr3 28322362 28349090 28322362 28349090 - transcript678.chr3.nnic@AZI2 transcript678.chr3.nnic protein_coding 28348601,28340402,28338493,28336737,28332369,28326832,28322362 28349090,28340622,28338615,28336885,28332427,28326950,28324454 Gene ID= ENSG00000163512.13 TPM= 1.81 Transcript Type= NA chr3 28323537 28348978 28323537 28348978 - transcript681.chr3.nic@AZI2 transcript681.chr3.nic protein_coding 28348601,28340402,28336737,28332369,28326832,28323537 28348978,28340622,28338615,28332427,28326950,28324454 Gene ID= ENSG00000163512.13 TPM= 1.81 Transcript Type= NA chr3 28321047 28349127 28321047 28349127 - ENST00000479665.5@AZI2 ENST00000479665.5 protein_coding 28348601,28340402,28338493,28337937,28336737,28332369,28326832,28321047 28349127,28340622,28338615,28338036,28336885,28332427,28326950,28324454 Gene ID= ENSG00000163512.13 TPM= 43.47 Transcript Type= protein_coding chr3 28331691 28349050 28331691 28349050 - ENST00000420543.6@AZI2 ENST00000420543.6 protein_coding 28348601,28340402,28338493,28337937,28336737,28332369,28331691 28349050,28340622,28338615,28338036,28336885,28332427,28331954 Gene ID= ENSG00000163512.13 TPM= 9.96 Transcript Type= protein_coding chr3 29281052 30010362 29281052 30010362 + transcript686.chr3.nnic@RBMS3 transcript686.chr3.nnic protein_coding 29281052,29434743,29488441,29587112,29739715,29762910,29868858,29884160,29897379,29936086,29988143,29991082,30003856 29281756,29434915,29488499,29587200,29739877,29762989,29868964,29884208,29897475,29936196,29988223,29991209,30010362 Gene ID= ENSG00000144642.21 TPM= 19.47 Transcript Type= NA chr3 29280951 29766664 29280951 29766664 + transcript689.chr3.nnic@RBMS3 transcript689.chr3.nnic protein_coding 29280951,29434743,29488441,29587112,29739715,29762910 29281756,29434915,29488499,29587200,29739877,29766664 Gene ID= ENSG00000144642.21 TPM= 111.83 Transcript Type= NA chr3 30614581 30694248 30614581 30694248 + transcript702.chr3.nnic@TGFBR2 transcript702.chr3.nnic protein_coding 30614581,30623199,30644747,30650270,30671638,30674105,30688384,30691420 30614706,30623273,30644915,30650460,30672437,30674246,30688511,30694248 Gene ID= ENSG00000163513.17 TPM= 12.38 Transcript Type= NA chr3 30606502 30694134 30606502 30694134 + ENST00000295754.9@TGFBR2 ENST00000295754.9 protein_coding 30606502,30644747,30650270,30671638,30674105,30688384,30691420 30606977,30644915,30650460,30672437,30674246,30688511,30694134 Gene ID= ENSG00000163513.17 TPM= 114.71 Transcript Type= protein_coding chr3 30606601 30694142 30606601 30694142 + ENST00000359013.4@TGFBR2 ENST00000359013.4 protein_coding 30606601,30623199,30644747,30650270,30671638,30674105,30688384,30691420 30606977,30623273,30644915,30650460,30672437,30674246,30688511,30694142 Gene ID= ENSG00000163513.17 TPM= 38.64 Transcript Type= protein_coding chr3 31532604 31637616 31532604 31637616 + transcript712.chr3.nic@STT3B transcript712.chr3.nic protein_coding 31532604,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984 31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633184,31637616 Gene ID= ENSG00000163527.9 TPM= 5.43 Transcript Type= NA chr3 31532790 31637622 31532790 31637622 + ENST00000295770.3@STT3B ENST00000295770.3 protein_coding 31532790,31576396,31579809,31596798,31600360,31615105,31616929,31617940,31619676,31622097,31623674,31624914,31625954,31629298,31632935,31635984 31533312,31576504,31580096,31596863,31600459,31615203,31617075,31617988,31619830,31622308,31623861,31625085,31626127,31629411,31633147,31637622 Gene ID= ENSG00000163527.9 TPM= 108.67 Transcript Type= protein_coding chr3 32106511 32168713 32106511 32168713 + ENST00000282541.9@GPD1L ENST00000282541.9 protein_coding 32106511,32128076,32138587,32140228,32146622,32158876,32159568,32165814 32106758,32128253,32138727,32140366,32146734,32159109,32159674,32168713 Gene ID= ENSG00000152642.10 TPM= 97.8 Transcript Type= protein_coding chr3 32238167 32370323 32238167 32370323 + transcript732.chr3.nnic@CMTM8 transcript732.chr3.nnic protein_coding 32238167,32238742,32357373,32367872,32369884 32238269,32239119,32357546,32367988,32370323 Gene ID= ENSG00000170293.8 TPM= 5.43 Transcript Type= NA chr3 32238679 32370325 32238679 32370325 + ENST00000307526.3@CMTM8 ENST00000307526.3 protein_coding 32238679,32357373,32367872,32369884 32239119,32357546,32367988,32370325 Gene ID= ENSG00000170293.8 TPM= 27.17 Transcript Type= protein_coding chr3 32391671 32455528 32391671 32455528 + ENST00000334983.9@CMTM7 ENST00000334983.9 protein_coding 32391671,32441840,32449454,32452392,32454241 32392065,32442013,32449552,32452473,32455528 Gene ID= ENSG00000153551.13 TPM= 28.07 Transcript Type= protein_coding chr3 32481312 32503408 32481312 32503408 - ENST00000205636.3@CMTM6 ENST00000205636.3 protein_coding 32502608,32491710,32487938,32481312 32503408,32491886,32488036,32484097 Gene ID= ENSG00000091317.7 TPM= 174.77 Transcript Type= protein_coding chr3 32525971 32570874 32525971 32570874 - ENST00000273130.8@DYNC1LI1 ENST00000273130.8 protein_coding 32570625,32570346,32545849,32544876,32541037,32537011,32534511,32532986,32530461,32530284,32529540,32528446,32525971 32570874,32570419,32545965,32545106,32541206,32537104,32534646,32533097,32530520,32530328,32529660,32528601,32526908 Gene ID= ENSG00000144635.8 TPM= 28.98 Transcript Type= protein_coding chr3 32685145 32773875 32685145 32773875 + ENST00000328834.9@CNOT10 ENST00000328834.9 protein_coding 32685145,32703868,32704811,32708670,32713227,32716225,32717154,32720114,32725450,32727668,32733423,32734800,32737410,32759458,32762733,32764455,32764682,32769887,32773457 32685482,32703962,32704972,32708820,32713369,32716311,32717237,32720231,32725599,32727870,32733544,32734976,32737490,32759571,32762863,32764490,32764809,32769962,32773875 Gene ID= ENSG00000182973.18 TPM= 8.15 Transcript Type= protein_coding chr3 32996608 33097230 32996608 33097230 - ENST00000307363.9@GLB1 ENST00000307363.9 protein_coding 33097011,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996608 33097230,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344 Gene ID= ENSG00000170266.15 TPM= 218.44 Transcript Type= protein_coding chr3 32996609 33096835 32996609 33096835 - ENST00000399402.7@GLB1 ENST00000399402.7 protein_coding 33096719,33072544,33068820,33068230,33065463,33058089,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996609 33096835,33072713,33068970,33068290,33065557,33058269,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344 Gene ID= ENSG00000170266.15 TPM= 21.04 Transcript Type= protein_coding chr3 32996729 33097146 32996729 33097146 - ENST00000307377.12@GLB1 ENST00000307377.12 protein_coding 33097011,33072544,33065463,33053491,33051883,33051758,33046120,33024251,33021566,33018448,33016709,33014056,32996729 33097146,33072713,33065557,33053549,33052004,33051798,33046232,33024325,33021655,33018561,33016840,33014310,32997344 Gene ID= ENSG00000170266.15 TPM= 3.69 Transcript Type= protein_coding chr3 33113979 33147773 33113979 33147773 + ENST00000320954.10@CRTAP ENST00000320954.10 protein_coding 33113979,33120344,33124408,33129939,33132555,33134182,33142395 33114548,33120493,33124579,33130067,33132700,33134265,33147773 Gene ID= ENSG00000170275.14 TPM= 187 Transcript Type= protein_coding chr3 33114050 33145038 33114050 33145038 + transcript780.chr3.nnic@CRTAP transcript780.chr3.nnic protein_coding 33114050,33120344,33124408,33129939,33134182,33142395 33114548,33120493,33124579,33130067,33134265,33145038 Gene ID= ENSG00000170275.14 TPM= 46.64 Transcript Type= NA chr3 33277422 33388092 33277422 33388092 + ENST00000484457.5@FBXL2 ENST00000484457.5 protein_coding 33277422,33297664,33358967,33359283,33364625,33373092,33373260,33373578,33373847,33375288,33377273,33378103,33378685,33383989,33385501 33277515,33297725,33359021,33359357,33364719,33373160,33373355,33373704,33373921,33375418,33377333,33378147,33378741,33384201,33388092 Gene ID= ENSG00000153558.13 TPM= 14.49 Transcript Type= protein_coding chr3 33388336 33440378 33388336 33440378 - ENST00000283629.7@UBP1 ENST00000283629.7 protein_coding 33439736,33425590,33416758,33412722,33411581,33409449,33409236,33408690,33402801,33400962,33400189,33397045,33396162,33393312,33392563,33388336 33440378,33425741,33416834,33412827,33411687,33409601,33409346,33408797,33402904,33401016,33400282,33397135,33396280,33393454,33392614,33390368 Gene ID= ENSG00000153560.11 TPM= 7.24 Transcript Type= protein_coding chr3 33388339 33440010 33388339 33440010 - ENST00000447368.6@UBP1 ENST00000447368.6 protein_coding 33439736,33425590,33416758,33412722,33411581,33409449,33409236,33402801,33400962,33400189,33397045,33396162,33393312,33392563,33388339 33440010,33425741,33416834,33412827,33411687,33409601,33409346,33402904,33401016,33400282,33397135,33396280,33393454,33392614,33390368 Gene ID= ENSG00000153560.11 TPM= 2.72 Transcript Type= protein_coding chr3 33496249 33718185 33496249 33718185 - transcript798.chr3.nnic@CLASP2 transcript798.chr3.nnic protein_coding 33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33559125,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496249 33718185,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33559175,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717 Gene ID= ENSG00000163539.16 TPM= 2.04 Transcript Type= NA chr3 33496249 33718246 33496249 33718246 - transcript799.chr3.nnic@CLASP2 transcript799.chr3.nnic protein_coding 33717808,33696855,33689829,33688277,33687060,33684359,33663445,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496249 33718246,33696933,33689932,33688368,33687135,33684456,33663515,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717 Gene ID= ENSG00000163539.16 TPM= 14.72 Transcript Type= NA chr3 33496249 33659130 33496249 33659130 - transcript805.chr3.nnic@CLASP2 transcript805.chr3.nnic protein_coding 33658974,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33573110,33570727,33563964,33560808,33559307,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496249 33659130,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33573354,33570790,33563966,33560971,33559385,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717 Gene ID= ENSG00000163539.16 TPM= 3.85 Transcript Type= NA chr3 33496249 33659130 33496249 33659130 - transcript807.chr3.nnic@CLASP2 transcript807.chr3.nnic protein_coding 33658974,33644757,33632292,33626988,33622135,33619603,33612001,33608567,33607384,33606591,33604154,33602952,33592395,33584750,33581821,33576169,33574473,33573110,33570727,33560808,33559307,33551252,33544698,33543433,33538789,33535233,33516981,33516023,33510558,33501652,33496249 33659130,33644903,33632371,33627080,33622280,33619738,33612071,33608626,33607461,33606758,33604209,33603125,33592496,33584920,33581928,33576275,33574496,33573354,33570790,33560971,33559385,33551395,33544841,33543539,33538942,33535461,33517174,33516151,33510764,33501768,33498717 Gene ID= ENSG00000163539.16 TPM= 3.85 Transcript Type= NA chr3 33681647 33718246 33681647 33718246 - transcript809.chr3.nic@CLASP2 transcript809.chr3.nic protein_coding 33717808,33696855,33689829,33688277,33687060,33684359,33681647 33718246,33696933,33689932,33688368,33687135,33684456,33683604 Gene ID= ENSG00000163539.16 TPM= 3.62 Transcript Type= NA chr3 33798571 33869707 33798571 33869707 + ENST00000457054.6@PDCD6IP ENST00000457054.6 protein_coding 33798571,33812072,33813559,33821955,33825187,33826480,33828838,33836044,33838204,33841897,33844112,33845419,33852488,33853879,33855166,33864006,33865243,33866351 33798937,33812126,33813628,33822082,33825340,33826580,33828969,33836266,33838327,33842074,33844223,33845588,33852736,33854013,33855260,33864129,33865430,33869707 Gene ID= ENSG00000170248.13 TPM= 14.49 Transcript Type= protein_coding chr3 36380344 36548007 36380344 36548007 + ENST00000273183.7@STAC ENST00000273183.7 protein_coding 36380344,36443364,36482992,36484977,36486134,36493151,36504393,36505746,36528696,36528848,36546191 36380754,36443640,36483092,36485058,36486249,36493229,36504457,36505834,36528747,36528985,36548007 Gene ID= ENSG00000144681.10 TPM= 5.43 Transcript Type= protein_coding chr3 36993332 37050918 36993332 37050918 + ENST00000231790.6@MLH1 ENST00000231790.6 protein_coding 36993332,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486 36993663,36996709,37001053,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050918 Gene ID= ENSG00000076242.14 TPM= 27.17 Transcript Type= protein_coding chr3 36993804 37050844 36993804 37050844 + ENST00000435176.5@MLH1 ENST00000435176.5 protein_coding 36993804,36996619,37000955,37004401,37006991,37008814,37011820,37012011,37014432,37017506,37020310,37025637,37028784,37040186,37042268,37047519,37048517,37048904,37050486 36993890,36996709,37001048,37004474,37007063,37008905,37011862,37012099,37014544,37017599,37020463,37026007,37028932,37040294,37042331,37047683,37048609,37049017,37050844 Gene ID= ENSG00000076242.14 TPM= 7.24 Transcript Type= protein_coding chr3 37053687 37176348 37053687 37176348 - transcript841.chr3.nnic@LRRFIP2 transcript841.chr3.nnic protein_coding 37175818,37174539,37154614,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053687 37176348,37174605,37154724,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961 Gene ID= ENSG00000093167.17 TPM= 1.81 Transcript Type= NA chr3 37053006 37176348 37053006 37176348 - transcript848.chr3.nic@LRRFIP2 transcript848.chr3.nic protein_coding 37175818,37174539,37148894,37129063,37096616,37094792,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053006 37176348,37174605,37149038,37129149,37096660,37094908,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961 Gene ID= ENSG00000093167.17 TPM= 6.34 Transcript Type= NA chr3 37168438 37176277 37168438 37176277 - transcript854.chr3.nic@LRRFIP2 transcript854.chr3.nic protein_coding 37175818,37174539,37168438 37176277,37174605,37171066 Gene ID= ENSG00000093167.17 TPM= 1.81 Transcript Type= NA chr3 37170025 37176354 37170025 37176354 - transcript857.chr3.nnic@LRRFIP2 transcript857.chr3.nnic protein_coding 37176060,37174539,37170025 37176354,37174605,37173194 Gene ID= ENSG00000093167.17 TPM= 2.72 Transcript Type= NA chr3 37053004 37176337 37053004 37176337 - ENST00000421276.6@LRRFIP2 ENST00000421276.6 protein_coding 37176060,37174539,37148894,37129063,37096616,37094792,37091467,37083636,37075024,37065810,37063742,37058790,37055086,37054411,37053004 37176337,37174605,37149038,37129149,37096660,37094908,37091538,37083806,37075116,37065942,37063791,37058910,37055165,37054515,37053961 Gene ID= ENSG00000093167.17 TPM= 32.6 Transcript Type= protein_coding chr3 37243258 37366747 37243258 37366747 + transcript862.chr3.nic@GOLGA4 transcript862.chr3.nic protein_coding 37243258,37251395,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37366080 37243622,37251484,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37366747 Gene ID= ENSG00000144674.16 TPM= 11.77 Transcript Type= NA chr3 37243258 37366747 37243258 37366747 + transcript864.chr3.nic@GOLGA4 transcript864.chr3.nic protein_coding 37243258,37251395,37273536,37281958,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337143,37337666,37340124,37347193,37355101,37361243,37366080 37243622,37251484,37273601,37282272,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337163,37337734,37340199,37347296,37355187,37361305,37366747 Gene ID= ENSG00000144674.16 TPM= 3.62 Transcript Type= NA chr3 37243252 37366745 37243252 37366745 + ENST00000356847.8@GOLGA4 ENST00000356847.8 protein_coding 37243252,37251395,37273536,37281958,37286014,37289235,37294979,37296087,37298833,37299288,37302185,37315420,37319063,37321731,37323588,37328416,37328963,37335053,37337666,37340124,37347193,37355101,37366080 37243622,37251484,37273601,37282272,37286061,37289291,37295077,37296219,37299020,37299371,37302332,37315598,37319194,37321886,37327825,37328537,37329093,37335166,37337734,37340199,37347296,37355187,37366745 Gene ID= ENSG00000144674.16 TPM= 3.62 Transcript Type= protein_coding chr3 37452119 37823514 37452119 37823514 + ENST00000264741.9@ITGA9 ENST00000264741.9 protein_coding 37452119,37471007,37473354,37481484,37494501,37503178,37506000,37508559,37513763,37517504,37519260,37523521,37526026,37533314,37542425,37629187,37653714,37683865,37732712,37736904,37741730,37743926,37750462,37777392,37779902,37784977,37803823,37818891 37452559,37471134,37473460,37481607,37494568,37503307,37506085,37508627,37513900,37517609,37519354,37523611,37526071,37533468,37542585,37629336,37653790,37684015,37732798,37736983,37741819,37744034,37750569,37777517,37780021,37785078,37803942,37823514 Gene ID= ENSG00000144668.11 TPM= 39.84 Transcript Type= protein_coding chr3 37787946 37861768 37787946 37861768 - transcript876.chr3.nnic@ITGA9-AS1 transcript876.chr3.nnic processed_transcript 37861701,37834679,37821014,37808704,37806079,37790843,37787946 37861768,37834767,37821100,37808880,37806185,37790911,37788496 Gene ID= ENSG00000235257.8 TPM= 1.81 Transcript Type= NA chr3 37994133 38007187 37994133 38007187 + transcript885.chr3.nic@VILL transcript885.chr3.nic protein_coding 37994133,37995739,37997077,37997483,37998090,37998266,37998912,37999339,38001456,38001702,38002396,38003168,38004255,38005792,38006181,38006449,38006942 37994466,37995847,37997187,37997685,37998168,37998364,37999050,37999439,38001593,38001860,38002575,38003313,38004399,38005974,38006252,38006700,38007187 Gene ID= ENSG00000136059.14 TPM= 17.21 Transcript Type= NA chr3 38007498 38029762 38007498 38029762 - ENST00000334661.4@PLCD1 ENST00000334661.4 protein_coding 38029506,38020188,38016491,38011544,38011214,38010361,38010131,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007498 38029762,38020352,38016719,38011673,38011445,38010562,38010275,38010053,38009811,38009431,38009158,38008636,38008367,38008163,38007858 Gene ID= ENSG00000187091.13 TPM= 46.64 Transcript Type= protein_coding chr3 38007497 38024541 38007497 38024541 - transcript893.chr3.nic@PLCD1 transcript893.chr3.nic protein_coding 38024337,38020188,38016491,38011544,38011214,38010361,38009904,38009653,38009272,38009042,38008458,38008235,38008014,38007497 38024541,38020352,38016719,38011673,38011445,38010562,38010275,38009811,38009431,38009158,38008636,38008367,38008163,38007858 Gene ID= ENSG00000187091.13 TPM= 4.98 Transcript Type= NA chr3 38122710 38137208 38122710 38137208 - ENST00000333167.12@ACAA1 ENST00000333167.12 protein_coding 38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38126162,38125826,38125565,38122710 38137208,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38126341,38125881,38125710,38123122 Gene ID= ENSG00000060971.17 TPM= 212.29 Transcript Type= protein_coding chr3 38122709 38137127 38122709 38137127 - transcript905.chr3.nic@ACAA1 transcript905.chr3.nic protein_coding 38136865,38136592,38133952,38131926,38131596,38129290,38127786,38126510,38125826,38125565,38122709 38137127,38136685,38134009,38132005,38131638,38129388,38127866,38126700,38125881,38125710,38123122 Gene ID= ENSG00000060971.17 TPM= 5.82 Transcript Type= NA chr3 38122710 38137242 38122710 38137242 - ENST00000411549.5@ACAA1 ENST00000411549.5 protein_coding 38136865,38136592,38133952,38131926,38129290,38127786,38126162,38125826,38125565,38122710 38137242,38136685,38134009,38132005,38129388,38127866,38126700,38125881,38125710,38123122 Gene ID= ENSG00000060971.17 TPM= 5.82 Transcript Type= nonsense_mediated_decay chr3 38138478 38143022 38138478 38143022 + ENST00000396334.7@MYD88 ENST00000396334.7 protein_coding 38138478,38139864,38140388,38140757,38141132 38139028,38139998,38140568,38140848,38143022 Gene ID= ENSG00000172936.12 TPM= 57.05 Transcript Type= protein_coding chr3 38165505 38255488 38165505 38255488 + ENST00000311806.7@OXSR1 ENST00000311806.7 protein_coding 38165505,38183003,38190731,38198722,38216096,38221578,38223812,38224571,38229687,38230365,38236839,38242743,38246075,38247668,38249966,38251403,38252328,38252817 38165946,38183115,38190839,38198863,38216151,38221687,38223913,38224704,38229735,38230430,38236961,38242778,38246221,38247732,38250018,38251471,38252392,38255488 Gene ID= ENSG00000172939.8 TPM= 53.43 Transcript Type= protein_coding chr3 38346765 38428434 38346765 38428434 + transcript922.chr3.nnic@XYLB transcript922.chr3.nnic protein_coding 38346765,38348550,38360339,38365199,38365608,38366808,38368185,38370056,38372655,38374462,38375144,38376117,38376918,38379246,38395505,38397072,38400891,38425686 38346925,38348632,38360408,38365285,38365736,38366873,38368257,38370174,38372736,38374502,38375259,38376232,38376991,38379342,38395563,38397159,38400985,38428434 Gene ID= ENSG00000093217.9 TPM= 1.81 Transcript Type= NA chr3 38453851 38493142 38453851 38493142 + ENST00000352511.4@ACVR2B ENST00000352511.4 protein_coding 38453851,38477287,38477861,38478141,38478375,38479128,38479678,38481351,38482198,38482430,38483138 38454374,38477494,38477970,38478292,38478518,38479271,38479826,38481465,38482336,38482560,38493142 Gene ID= ENSG00000114739.13 TPM= 2.72 Transcript Type= protein_coding chr3 38459422 38483457 38459422 38483457 + transcript925.chr3.nnic@ACVR2B transcript925.chr3.nnic protein_coding 38459422,38477287,38477861,38478141,38478375,38479128,38479678,38481351,38482198,38482430,38483138 38459689,38477494,38477970,38478292,38478518,38479271,38479826,38481465,38482336,38482560,38483457 Gene ID= ENSG00000114739.13 TPM= 2.72 Transcript Type= NA chr3 39051996 39096658 39051996 39096658 + transcript929.chr3.nic@WDR48 transcript929.chr3.nic protein_coding 39051996,39063050,39065811,39066548,39066746,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648,39095481 39052073,39063190,39065889,39066630,39066875,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39095414,39096658 Gene ID= ENSG00000114742.13 TPM= 3.62 Transcript Type= NA chr3 39051998 39096388 39051998 39096388 + ENST00000302313.9@WDR48 ENST00000302313.9 protein_coding 39051998,39063050,39065811,39066548,39066746,39068771,39069643,39074726,39077139,39078137,39079711,39084155,39084645,39085515,39088128,39089231,39091625,39093874,39094648 39052073,39063190,39065889,39066630,39066875,39068859,39069744,39074950,39077213,39078239,39079808,39084262,39084741,39085610,39088233,39089318,39091701,39094066,39096388 Gene ID= ENSG00000114742.13 TPM= 6.34 Transcript Type= protein_coding chr3 39096600 39107627 39096600 39107627 - transcript934.chr3.nnic@GORASP1 transcript934.chr3.nnic protein_coding 39107479,39103473,39102678,39101016,39100788,39100305,39099353,39098741,39096600 39107627,39103553,39102881,39101102,39100877,39100454,39099503,39098893,39098489 Gene ID= ENSG00000114745.13 TPM= 3.98 Transcript Type= NA chr3 39096600 39107638 39096600 39107638 - transcript940.chr3.nic@GORASP1 transcript940.chr3.nic protein_coding 39107479,39103473,39102678,39100747,39100305,39099353,39098741,39096600 39107638,39103553,39102881,39101102,39100503,39099503,39098893,39098489 Gene ID= ENSG00000114745.13 TPM= 3.98 Transcript Type= NA chr3 39096665 39107569 39096665 39107569 - ENST00000453680.5@GORASP1 ENST00000453680.5 protein_coding 39107479,39103473,39102678,39101016,39100747,39100305,39099353,39098741,39096665 39107569,39103553,39102881,39101102,39100877,39100454,39099503,39098893,39098489 Gene ID= ENSG00000114745.13 TPM= 5.19 Transcript Type= nonsense_mediated_decay chr3 39096668 39107638 39096668 39107638 - ENST00000422110.6@GORASP1 ENST00000422110.6 protein_coding 39107479,39101016,39100305,39099353,39098741,39096668 39107638,39101102,39100454,39099503,39098893,39098489 Gene ID= ENSG00000114745.13 TPM= 1.57 Transcript Type= protein_coding chr3 39096665 39107621 39096665 39107621 - ENST00000452389.6@GORASP1 ENST00000452389.6 protein_coding 39107479,39103473,39102678,39101016,39100788,39100305,39099353,39098741,39096665 39107621,39103553,39102881,39101102,39100877,39100503,39099503,39098893,39098489 Gene ID= ENSG00000114745.13 TPM= 1.57 Transcript Type= nonsense_mediated_decay chr3 39139835 39153633 39139835 39153633 - transcript956.chr3.nic@CSRNP1 transcript956.chr3.nic protein_coding 39153438,39146478,39144137,39139835 39153633,39146722,39145256,39144044 Gene ID= ENSG00000144655.14 TPM= 6.29 Transcript Type= NA chr3 39141855 39153575 39141855 39153575 - ENST00000273153.9@CSRNP1 ENST00000273153.9 protein_coding 39153438,39146478,39144997,39144137,39141855 39153575,39146722,39145256,39144451,39144044 Gene ID= ENSG00000144655.14 TPM= 174.95 Transcript Type= protein_coding chr3 39383321 39397227 39383321 39397227 + transcript965.chr3.nic@SLC25A38 transcript965.chr3.nic protein_coding 39383321,39389495,39390423,39394410,39396398 39383793,39389616,39392021,39394576,39397227 Gene ID= ENSG00000144659.10 TPM= 2.72 Transcript Type= NA chr3 39383348 39397351 39383348 39397351 + ENST00000273158.8@SLC25A38 ENST00000273158.8 protein_coding 39383348,39389495,39390423,39391441,39391853,39394410,39396398 39383793,39389616,39390507,39391620,39392021,39394576,39397351 Gene ID= ENSG00000144659.10 TPM= 100.52 Transcript Type= protein_coding chr3 39406689 39412542 39406689 39412542 + ENST00000301821.10@RPSA ENST00000301821.10 protein_coding 39406689,39407621,39408606,39410754,39411649,39411896,39412274 39406764,39407786,39408724,39410999,39411777,39412061,39412542 Gene ID= ENSG00000168028.13 TPM= 211.9 Transcript Type= protein_coding chr3 40173145 40309542 40173145 40309542 - ENST00000625390.2@EIF1B-AS1 ENST00000625390.2 processed_transcript 40309323,40301237,40173145 40309542,40301396,40174722 Gene ID= ENSG00000280739.2 TPM= 3.62 Transcript Type= lincRNA chr3 40184385 40309542 40184385 40309542 - transcript973.chr3.nnic@EIF1B-AS1 transcript973.chr3.nnic processed_transcript 40309323,40301237,40184385 40309542,40301396,40184585 Gene ID= ENSG00000280739.2 TPM= 2.72 Transcript Type= NA chr3 40309684 40312424 40309684 40312424 + ENST00000232905.3@EIF1B ENST00000232905.3 protein_coding 40309684,40310893,40311470,40311970 40309972,40311056,40311571,40312424 Gene ID= ENSG00000114784.3 TPM= 196.5 Transcript Type= protein_coding chr3 40457292 40468587 40457292 40468587 + ENST00000338970.10@RPL14 ENST00000338970.10 protein_coding 40457292,40457890,40458642,40461407,40461608,40461939 40457363,40457991,40458736,40461506,40461661,40468587 Gene ID= ENSG00000188846.13 TPM= 150.32 Transcript Type= protein_coding chr3 40457340 40462368 40457340 40462368 + ENST00000396203.6@RPL14 ENST00000396203.6 protein_coding 40457340,40457890,40458642,40461407,40461608,40461939 40457474,40457991,40458736,40461506,40461661,40462368 Gene ID= ENSG00000188846.13 TPM= 127.68 Transcript Type= protein_coding chr3 40506039 40518720 40506039 40518720 + transcript989.chr3.nnic@ZNF620 transcript989.chr3.nnic protein_coding 40506039,40506304,40508813,40511470,40512402,40515860 40506138,40506376,40508947,40511596,40512515,40518720 Gene ID= ENSG00000177842.11 TPM= 1.81 Transcript Type= NA chr3 40524885 40537696 40524885 40537696 + ENST00000339296.9@ZNF621 ENST00000339296.9 protein_coding 40524885,40525779,40529319,40530209,40532030 40525274,40525864,40529445,40530316,40537696 Gene ID= ENSG00000172888.11 TPM= 2.72 Transcript Type= protein_coding chr3 41199470 41237447 41199470 41237447 + transcript1002.chr3.nic@CTNNB1 transcript1002.chr3.nic protein_coding 41199470,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588 41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41237447 Gene ID= ENSG00000168036.16 TPM= 3.62 Transcript Type= NA chr3 41199439 41240453 41199439 41240453 + ENST00000349496.9@CTNNB1 ENST00000349496.9 protein_coding 41199439,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134 41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41240453 Gene ID= ENSG00000168036.16 TPM= 49.58 Transcript Type= protein_coding chr3 41199505 41240443 41199505 41240443 + ENST00000396185.7@CTNNB1 ENST00000396185.7 protein_coding 41199505,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239660 41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443 Gene ID= ENSG00000168036.16 TPM= 13.36 Transcript Type= protein_coding chr3 41199434 41240443 41199434 41240443 + ENST00000396183.7@CTNNB1 ENST00000396183.7 protein_coding 41199434,41224021,41224526,41224954,41225334,41225660,41227208,41233341,41233529,41234139,41235724,41236349,41236588,41238016,41239134,41239819 41199670,41224081,41224753,41225207,41225572,41225861,41227352,41233444,41233867,41234297,41235843,41236499,41236709,41238076,41239354,41240443 Gene ID= ENSG00000168036.16 TPM= 23.32 Transcript Type= protein_coding chr3 41937095 41962130 41937095 41962130 - ENST00000414606.1@ULK4 ENST00000414606.1 protein_coding 41962016,41954622,41938098,41937095 41962130,41954807,41938197,41937340 Gene ID= ENSG00000168038.10 TPM= 1.81 Transcript Type= protein_coding chr3 42013643 42225768 42013643 42225768 + transcript1010.chr3.nnic@TRAK1 transcript1010.chr3.nnic protein_coding 42013643,42086499,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767,42217243,42219494,42222942 42014117,42086667,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42209985,42217315,42219596,42225768 Gene ID= ENSG00000182606.14 TPM= 2.49 Transcript Type= NA chr3 42013593 42225773 42013593 42225773 + transcript1011.chr3.nnic@TRAK1 transcript1011.chr3.nnic protein_coding 42013593,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767,42217243,42219494,42222942 42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42209922,42217315,42219596,42225773 Gene ID= ENSG00000182606.14 TPM= 4.3 Transcript Type= NA chr3 42013593 42225775 42013593 42225775 + transcript1014.chr3.nnic@TRAK1 transcript1014.chr3.nnic protein_coding 42013593,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767,42219494,42222942 42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42209922,42219596,42225775 Gene ID= ENSG00000182606.14 TPM= 6.11 Transcript Type= NA chr3 42013593 42225889 42013593 42225889 + transcript1016.chr3.nnic@TRAK1 transcript1016.chr3.nnic protein_coding 42013593,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767,42219494,42222942 42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42210123,42219596,42225889 Gene ID= ENSG00000182606.14 TPM= 3.4 Transcript Type= NA chr3 42013593 42212615 42013593 42212615 + transcript1019.chr3.nic@TRAK1 transcript1019.chr3.nic protein_coding 42013593,42087104,42125420,42176814,42184685,42188045,42189016,42191558,42193075,42193824,42194804,42199177,42200818,42202436,42209767 42014117,42087400,42125614,42176890,42184801,42188145,42189124,42191636,42193205,42193898,42194941,42199253,42201054,42202752,42212615 Gene ID= ENSG00000182606.14 TPM= 18.11 Transcript Type= NA chr3 42502623 42537567 42502623 42537567 + ENST00000325123.4@VIPR1 ENST00000325123.4 protein_coding 42502623,42513749,42519223,42525887,42527393,42527991,42530779,42531471,42531803,42532242,42534975,42535343,42536090 42502813,42513854,42519330,42525993,42527496,42528123,42530932,42531531,42531869,42532333,42535104,42535384,42537567 Gene ID= ENSG00000114812.12 TPM= 3.62 Transcript Type= protein_coding chr3 42547971 42582028 42547971 42582028 - ENST00000273156.11@SEC22C ENST00000273156.11 protein_coding 42581846,42568865,42563523,42561117,42557578,42555930,42547971 42582028,42569073,42563686,42561296,42557696,42555995,42548657 Gene ID= ENSG00000093183.13 TPM= 29.28 Transcript Type= protein_coding chr3 42547967 42601298 42547967 42601298 - transcript1028.chr3.nnic@SEC22C transcript1028.chr3.nnic protein_coding 42600997,42568865,42563523,42561117,42557578,42555930,42547967 42601298,42569073,42563686,42561296,42557696,42555995,42548657 Gene ID= ENSG00000093183.13 TPM= 3.92 Transcript Type= NA chr3 42547969 42581942 42547969 42581942 - ENST00000423701.6@SEC22C ENST00000423701.6 protein_coding 42581846,42568865,42563523,42561117,42557578,42547969 42581942,42569073,42563686,42561296,42557696,42548657 Gene ID= ENSG00000093183.13 TPM= 2.11 Transcript Type= protein_coding chr3 42600614 42648741 42600614 42648741 + ENST00000232978.12@NKTR ENST00000232978.12 protein_coding 42600614,42600984,42617570,42619020,42619664,42621429,42630546,42631171,42632601,42633580,42634613,42635221,42636868,42642501,42643339,42643902,42645888 42600778,42601064,42617644,42619127,42619708,42621516,42630575,42631316,42632823,42633735,42634700,42635366,42639750,42642596,42643395,42644003,42648741 Gene ID= ENSG00000114857.17 TPM= 3.62 Transcript Type= protein_coding chr3 42654345 42667580 42654345 42667580 + transcript1035.chr3.nnic@ZBTB47 transcript1035.chr3.nnic protein_coding 42654345,42658275,42661485,42663012,42663797,42664237 42654695,42659828,42661632,42663127,42663941,42667580 Gene ID= ENSG00000114853.13 TPM= 29.88 Transcript Type= NA chr3 42782964 42804526 42782964 42804526 - transcript1038.chr3.nnic@HIGD1A transcript1038.chr3.nnic protein_coding 42804436,42794157,42788622,42786028,42782964 42804526,42794275,42788881,42786162,42785320 Gene ID= ENSG00000181061.13 TPM= 4.53 Transcript Type= NA chr3 42784298 42804531 42784298 42804531 - ENST00000321331.11@HIGD1A ENST00000321331.11 protein_coding 42804436,42794157,42786028,42784298 42804531,42794275,42786162,42785320 Gene ID= ENSG00000181061.13 TPM= 150.32 Transcript Type= protein_coding chr3 42936360 42942792 42936360 42942792 + ENST00000383748.8@KRBOX1 ENST00000383748.8 protein_coding 42936360,42938850,42941226,42941958,42942538 42936455,42938931,42941352,42942071,42942792 Gene ID= ENSG00000240747.7 TPM= 3.62 Transcript Type= protein_coding chr3 43079234 43106076 43079234 43106076 - ENST00000344697.2@POMGNT2 ENST00000344697.2 protein_coding 43105836,43079234 43106076,43081536 Gene ID= ENSG00000144647.5 TPM= 75.16 Transcript Type= protein_coding chr3 43286540 43351138 43286540 43351138 + ENST00000296088.11@SNRK ENST00000296088.11 protein_coding 43286540,43299754,43303098,43332169,43340287,43343344,43347339 43286675,43299815,43303792,43332310,43340499,43343478,43351138 Gene ID= ENSG00000163788.13 TPM= 6.04 Transcript Type= protein_coding chr3 43286616 43351140 43286616 43351140 + transcript1057.chr3.nnic@SNRK transcript1057.chr3.nnic protein_coding 43286616,43299754,43303098,43332169,43340287,43343344,43347339 43286808,43299815,43303792,43332310,43340499,43343478,43351140 Gene ID= ENSG00000163788.13 TPM= 2.42 Transcript Type= NA chr3 43286538 43351143 43286538 43351143 + ENST00000429705.6@SNRK ENST00000429705.6 protein_coding 43286538,43303098,43332169,43340287,43343344,43347339 43286675,43303792,43332310,43340499,43343478,43351143 Gene ID= ENSG00000163788.13 TPM= 6.95 Transcript Type= protein_coding chr3 43286559 43333358 43286559 43333358 + transcript1060.chr3.nic@SNRK transcript1060.chr3.nic protein_coding 43286559,43289740,43299754,43303098,43332169 43286675,43289789,43299815,43303792,43333358 Gene ID= ENSG00000163788.13 TPM= 1.81 Transcript Type= NA chr3 43366325 43621928 43366325 43621928 - transcript1063.chr3.nic@ANO10 transcript1063.chr3.nic protein_coding 43621773,43605714,43600384,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43366325 43621928,43605863,43600581,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974 Gene ID= ENSG00000160746.12 TPM= 6.79 Transcript Type= NA chr3 43366359 43621984 43366359 43621984 - ENST00000396091.7@ANO10 ENST00000396091.7 protein_coding 43621909,43605714,43598532,43580353,43576692,43574809,43565653,43561220,43555278,43549720,43432611,43366359 43621984,43605863,43598666,43580472,43577261,43574864,43565727,43561402,43555469,43549848,43432727,43366974 Gene ID= ENSG00000160746.12 TPM= 4.07 Transcript Type= protein_coding chr3 43690870 43719049 43690870 43719049 + ENST00000458276.6@ABHD5 ENST00000458276.6 protein_coding 43690870,43699276,43702215,43711709,43714947,43717671,43718443 43691039,43699361,43702587,43711863,43715058,43717857,43719049 Gene ID= ENSG00000011198.7 TPM= 10.87 Transcript Type= protein_coding chr3 44338102 44409447 44338102 44409447 + transcript1075.chr3.nic@TCAIM transcript1075.chr3.nic protein_coding 44338102,44354739,44357741,44361365,44367532,44392855,44396400,44396743,44400355,44401203,44407442 44338319,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409447 Gene ID= ENSG00000179152.19 TPM= 15.39 Transcript Type= NA chr3 44338757 44409451 44338757 44409451 + ENST00000412611.6@TCAIM ENST00000412611.6 protein_coding 44338757,44354739,44357741,44361365,44367532,44392855,44396400,44396743,44400355,44401203,44407442 44338834,44354811,44357876,44361518,44367708,44392977,44396497,44396834,44400587,44401334,44409451 Gene ID= ENSG00000179152.19 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr3 44555208 44572158 44555208 44572158 + ENST00000273320.7@ZKSCAN7 ENST00000273320.7 protein_coding 44555208,44556930,44565487,44567912,44568307,44569922 44555518,44557470,44565655,44568003,44568433,44572158 Gene ID= ENSG00000196345.12 TPM= 1.81 Transcript Type= protein_coding chr3 44625028 44644898 44625028 44644898 + transcript1090.chr3.nic@ZNF197 transcript1090.chr3.nic protein_coding 44625028,44629074,44630814,44631062,44632105,44632473,44641900 44625143,44629544,44630946,44631221,44632196,44632599,44644898 Gene ID= ENSG00000186448.14 TPM= 2.72 Transcript Type= NA chr3 44625049 44648471 44625049 44648471 + ENST00000383745.6@ZNF197 ENST00000383745.6 protein_coding 44625049,44629065,44631062,44632105,44632473,44646491 44625143,44629544,44631221,44632196,44632599,44648471 Gene ID= ENSG00000186448.14 TPM= 1.81 Transcript Type= protein_coding chr3 44648727 44660789 44648727 44660789 + ENST00000396056.6@ZNF35 ENST00000396056.6 protein_coding 44648727,44650941,44652557,44658701 44648834,44651259,44652701,44660789 Gene ID= ENSG00000169981.10 TPM= 2.72 Transcript Type= protein_coding chr3 44712646 44723831 44712646 44723831 + ENST00000296091.8@ZNF502 ENST00000296091.8 protein_coding 44712646,44714591,44720203,44720873 44712744,44714688,44720316,44723831 Gene ID= ENSG00000196653.11 TPM= 1.81 Transcript Type= protein_coding chr3 44753037 44761618 44753037 44761618 - transcript1101.chr3.nnic@KIAA1143 transcript1101.chr3.nnic protein_coding 44761495,44754224,44753037 44761618,44754368,44753607 Gene ID= ENSG00000163807.5 TPM= 1.81 Transcript Type= NA chr3 44748744 44761662 44748744 44761662 - ENST00000296121.5@KIAA1143 ENST00000296121.5 protein_coding 44761495,44754224,44748744 44761662,44754368,44753552 Gene ID= ENSG00000163807.5 TPM= 15.39 Transcript Type= protein_coding chr3 44861869 44865670 44861869 44865670 + ENST00000302392.4@TMEM42 ENST00000302392.4 protein_coding 44861869,44864197,44865040 44862116,44864343,44865670 Gene ID= ENSG00000169964.7 TPM= 14.49 Transcript Type= protein_coding chr3 44861889 44865660 44861889 44865660 + transcript1107.chr3.nnic@TMEM42 transcript1107.chr3.nnic protein_coding 44861889,44864197,44865135 44862116,44864343,44865660 Gene ID= ENSG00000169964.7 TPM= 1.81 Transcript Type= NA chr3 44861890 44865661 44861890 44865661 + transcript1108.chr3.nnic@TMEM42 transcript1108.chr3.nnic protein_coding 44861890,44864197,44865040 44862015,44864343,44865661 Gene ID= ENSG00000169964.7 TPM= 4.53 Transcript Type= NA chr3 44915262 44976187 44915262 44976187 - transcript1128.chr3.nic@ZDHHC3 transcript1128.chr3.nic protein_coding 44975933,44959131,44945168,44933888,44933118,44929306,44915262 44976187,44959460,44945292,44933984,44933199,44929436,44918143 Gene ID= ENSG00000163812.13 TPM= 8.15 Transcript Type= NA chr3 44925171 44976177 44925171 44976177 - ENST00000424952.6@ZDHHC3 ENST00000424952.6 protein_coding 44975933,44959131,44945168,44933888,44933118,44929306,44925171 44976177,44959460,44945292,44933984,44933199,44929436,44926847 Gene ID= ENSG00000163812.13 TPM= 137.19 Transcript Type= protein_coding chr3 44976226 45012667 44976226 45012667 + transcript1111.chr3.nic@EXOSC7 transcript1111.chr3.nic protein_coding 44976226,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183,45012504 44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012290,45012667 Gene ID= ENSG00000075914.12 TPM= 4.53 Transcript Type= NA chr3 44975201 45011479 44975201 45011479 + transcript1125.chr3.nic@EXOSC7 transcript1125.chr3.nic protein_coding 44975201,44989140,44989550,44997087,45001538,45005291,45007420,45011235 44975476,44989241,44989644,44997252,45001608,45005414,45007575,45011479 Gene ID= ENSG00000075914.12 TPM= 6.34 Transcript Type= NA chr3 44975241 45012666 44975241 45012666 + ENST00000461361.5@EXOSC7 ENST00000461361.5 protein_coding 44975241,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183 44975476,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012666 Gene ID= ENSG00000075914.12 TPM= 1.81 Transcript Type= processed_transcript chr3 44976230 45011470 44976230 45011470 + ENST00000265564.7@EXOSC7 ENST00000265564.7 protein_coding 44976230,44989140,44989550,44997087,45001538,45005291,45007420,45011235 44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011470 Gene ID= ENSG00000075914.12 TPM= 65.2 Transcript Type= protein_coding chr3 44976264 45012633 44976264 45012633 + ENST00000491476.5@EXOSC7 ENST00000491476.5 protein_coding 44976264,44989140,44989550,44997087,45001538,45005291,45007420,45011235,45012183 44976334,44989241,44989644,44997252,45001608,45005414,45007575,45011393,45012633 Gene ID= ENSG00000075914.12 TPM= 19.02 Transcript Type= processed_transcript chr3 45026183 45036071 45026183 45036071 + ENST00000296130.4@CLEC3B ENST00000296130.4 protein_coding 45026183,45030827,45035524 45026471,45030925,45036071 Gene ID= ENSG00000163815.5 TPM= 101.42 Transcript Type= protein_coding chr3 45388561 45549421 45388561 45549421 + ENST00000415258.5@LARS2 ENST00000415258.5 protein_coding 45388561,45394433,45400245,45417482,45419669,45446891,45458743,45474243,45476468,45485692,45488697,45491517,45496275,45500442,45513135,45516094,45517903,45520219,45523997,45541829,45547351 45388680,45394687,45400373,45417573,45419729,45446980,45458886,45474350,45476627,45485796,45488812,45491800,45496373,45500579,45513235,45516276,45518072,45520296,45524108,45541956,45549421 Gene ID= ENSG00000011376.9 TPM= 7.24 Transcript Type= protein_coding chr3 45388506 45548837 45388506 45548837 + ENST00000265537.7@LARS2 ENST00000265537.7 protein_coding 45388506,45391583,45394433,45400245,45417482,45419669,45446891,45458743,45474243,45476468,45485692,45488697,45491517,45496275,45500442,45513135,45516094,45517903,45520219,45523997,45541829,45547351 45388680,45391648,45394687,45400373,45417573,45419729,45446980,45458886,45474350,45476627,45485796,45488812,45491800,45496373,45500579,45513235,45516276,45518072,45520296,45524108,45541956,45548837 Gene ID= ENSG00000011376.9 TPM= 40.75 Transcript Type= protein_coding chr3 45689262 45745424 45689262 45745424 + ENST00000389061.9@SACM1L ENST00000389061.9 protein_coding 45689262,45703438,45705135,45706780,45709498,45713137,45714046,45719500,45722000,45722869,45723475,45731301,45732053,45735235,45737583,45737772,45738578,45738781,45739587,45743533 45689497,45703535,45705209,45706907,45709647,45713196,45714079,45719601,45722085,45722955,45723543,45731380,45732151,45735373,45737652,45737844,45738671,45738873,45739644,45745424 Gene ID= ENSG00000211456.10 TPM= 50.71 Transcript Type= protein_coding chr3 45823316 45842166 45823316 45842166 - ENST00000296135.10@LZTFL1 ENST00000296135.10 protein_coding 45841989,45837927,45835590,45834238,45833050,45831073,45830913,45828439,45827356,45823316 45842166,45838051,45835784,45834298,45833121,45831138,45830990,45828615,45827459,45826332 Gene ID= ENSG00000163818.16 TPM= 8.15 Transcript Type= protein_coding chr3 45917904 45995815 45917904 45995815 - ENST00000296137.6@FYCO1 ENST00000296137.6 protein_coding 45995722,45984856,45981570,45979705,45975239,45973088,45969675,45966277,45965033,45964336,45962225,45959393,45958408,45955249,45936448,45931071,45923656,45917904 45995815,45985022,45981676,45979830,45975345,45973231,45969765,45968703,45965125,45964454,45962392,45959542,45958619,45955393,45936543,45931281,45923765,45921840 Gene ID= ENSG00000163820.14 TPM= 27.17 Transcript Type= protein_coding chr3 45995868 46001243 45995868 46001243 . transcript1162.chr3.nnic@NA transcript1162.chr3.nnic NA 45995868,46000913,46001084 45996089,46000955,46001243 Gene ID= novel_gene_chr3_1163 TPM= 1.81 Transcript Type= NA chr3 46201709 46208396 46201709 46208396 - ENST00000296140.3@CCR1 ENST00000296140.3 protein_coding 46208282,46201709 46208396,46204324 Gene ID= ENSG00000163823.3 TPM= 45.28 Transcript Type= protein_coding chr3 46515423 46566550 46515423 46566550 - ENST00000395905.7@LRRC2 ENST00000395905.7 protein_coding 46566177,46551467,46545046,46539045,46532773,46529905,46527426,46521522,46515423 46566550,46551610,46545253,46539201,46532909,46530050,46527581,46521658,46519063 Gene ID= ENSG00000163827.12 TPM= 6.34 Transcript Type= protein_coding chr3 46577237 46582463 46577237 46582463 + ENST00000296145.5@TDGF1 ENST00000296145.5 protein_coding 46577237,46579095,46579232,46579739,46579951,46581132 46578004,46579147,46579366,46579853,46580060,46582463 Gene ID= ENSG00000241186.9 TPM= 55.24 Transcript Type= protein_coding chr3 46669050 46693675 46669050 46693675 - transcript1179.chr3.nic@ALS2CL transcript1179.chr3.nic protein_coding 46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46676245,46674566,46673339,46672140,46671884,46671488,46669050 46693675,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46675686,46673381,46672201,46672033,46671584,46671064 Gene ID= ENSG00000178038.16 TPM= 4.98 Transcript Type= NA chr3 46669050 46693747 46669050 46693747 - transcript1181.chr3.nic@ALS2CL transcript1181.chr3.nic protein_coding 46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46674566,46673339,46672140,46671884,46671488,46669050 46693747,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46673381,46672201,46672033,46671584,46671064 Gene ID= ENSG00000178038.16 TPM= 7.7 Transcript Type= NA chr3 46669189 46693701 46669189 46693701 - ENST00000318962.8@ALS2CL ENST00000318962.8 protein_coding 46693643,46689338,46688098,46687619,46686983,46686308,46685525,46683989,46683782,46683130,46682029,46681500,46681246,46680430,46679210,46678259,46676849,46676642,46676245,46675618,46674566,46673339,46672140,46671884,46671488,46669189 46693701,46689465,46688296,46687684,46687148,46686439,46685644,46684047,46683848,46683326,46682094,46681598,46681407,46680541,46679287,46678389,46677022,46676738,46676402,46675686,46674739,46673381,46672201,46672033,46671584,46671064 Gene ID= ENSG00000178038.16 TPM= 4.53 Transcript Type= protein_coding chr3 46693781 46711739 46693781 46711739 + transcript1185.chr3.nnic@TMIE transcript1185.chr3.nnic protein_coding 46693781,46705790,46709126,46709579 46694618,46705907,46709275,46711739 Gene ID= ENSG00000181585.3 TPM= 3.62 Transcript Type= NA chr3 46835110 46882125 46835110 46882125 - transcript1223.chr3.nnic@MYL3 transcript1223.chr3.nnic protein_coding 46882074,46866508,46863262,46860960,46860676,46859475,46858384,46858231,46835110 46882125,46866600,46863396,46860987,46860825,46859648,46858461,46858272,46836203 Gene ID= ENSG00000160808.9 TPM= 2.72 Transcript Type= NA chr3 46857877 46882178 46857877 46882178 - transcript1224.chr3.nic@MYL3 transcript1224.chr3.nic protein_coding 46882074,46866390,46863262,46860960,46860676,46859475,46858384,46858231,46857877 46882178,46866600,46863396,46860987,46860825,46859648,46858461,46858272,46858101 Gene ID= ENSG00000160808.9 TPM= 1.81 Transcript Type= NA chr3 46883237 46903815 46883237 46903815 + transcript1209.chr3.nnic@PTH1R transcript1209.chr3.nnic protein_coding 46883237,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270 46883634,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903815 Gene ID= ENSG00000160801.13 TPM= 17.11 Transcript Type= NA chr3 46883357 46903794 46883357 46903794 + ENST00000313049.9@PTH1R ENST00000313049.9 protein_coding 46883357,46893907,46895735,46897855,46898074,46898378,46898662,46899303,46901025,46901414,46901766,46902526,46902749,46903270 46883634,46894009,46895869,46897965,46898192,46898472,46898857,46899456,46901085,46901480,46901860,46902667,46902790,46903794 Gene ID= ENSG00000160801.13 TPM= 10.31 Transcript Type= protein_coding chr3 46921731 46976494 46921731 46976494 - transcript1230.chr3.nic@CCDC12 transcript1230.chr3.nic protein_coding 46976353,46940998,46925456,46923607,46923329,46922236,46921731 46976494,46941065,46925535,46923668,46923363,46922312,46922139 Gene ID= ENSG00000160799.11 TPM= 4.07 Transcript Type= NA chr3 46921731 46925686 46921731 46925686 - transcript1231.chr3.nic@CCDC12 transcript1231.chr3.nic protein_coding 46925456,46923607,46923329,46922236,46921731 46925686,46923668,46923363,46922312,46922139 Gene ID= ENSG00000160799.11 TPM= 4.07 Transcript Type= NA chr3 46979688 46990335 46979688 46990335 + transcript1233.chr3.nic@NBEAL2 transcript1233.chr3.nic protein_coding 46979688,46988669,46988842,46989085,46989260,46989511 46979912,46988757,46988970,46989166,46989381,46990335 Gene ID= ENSG00000160796.16 TPM= 3.62 Transcript Type= NA chr3 46979683 47009703 46979683 47009703 + ENST00000450053.7@NBEAL2 ENST00000450053.7 protein_coding 46979683,46988669,46988842,46989085,46989260,46989511,46991219,46991406,46991840,46992475,46993937,46994455,46995032,46995714,46995932,46996271,46996751,46996954,46997259,46997561,46998067,46998463,46998717,46998959,46999315,46999630,46999889,47001001,47001279,47001689,47001920,47002371,47002645,47002957,47003174,47003816,47004077,47004495,47004972,47005181,47005489,47005738,47005946,47006165,47006333,47007066,47007241,47007525,47007816,47008070,47008283,47008520,47008989,47009219 46979912,46988757,46988970,46989166,46989381,46989593,46991304,46991688,46991946,46992555,46994020,46994553,46995633,46995846,46996051,46996592,46996833,46997046,46997433,46997694,46998226,46998565,46998879,46999117,46999474,46999715,47000404,47001179,47001438,47001826,47002288,47002520,47002802,47003081,47003309,47003976,47004393,47004590,47005096,47005321,47005619,47005847,47006063,47006262,47006449,47007155,47007350,47007697,47007910,47008186,47008441,47008668,47009124,47009703 Gene ID= ENSG00000160796.16 TPM= 4.53 Transcript Type= protein_coding chr3 47275228 47282766 47275228 47282766 - ENST00000432493.5@KIF9 ENST00000432493.5 protein_coding 47282495,47277282,47275228 47282766,47277379,47275490 Gene ID= ENSG00000088727.12 TPM= 9.96 Transcript Type= protein_coding chr3 47282623 47346815 47282623 47346815 + transcript1242.chr3.nnic@KLHL18 transcript1242.chr3.nnic protein_coding 47282623,47319653,47322568,47329951,47333157,47334683,47336520,47340572,47342719,47343555 47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346815 Gene ID= ENSG00000114648.11 TPM= 5.43 Transcript Type= NA chr3 47282919 47346815 47282919 47346815 + transcript1245.chr3.nnic@KLHL18 transcript1245.chr3.nnic protein_coding 47282919,47322568,47329951,47333157,47334683,47336520,47340572,47342719,47343555 47283094,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346815 Gene ID= ENSG00000114648.11 TPM= 1.81 Transcript Type= NA chr3 47282946 47346816 47282946 47346816 + ENST00000232766.5@KLHL18 ENST00000232766.5 protein_coding 47282946,47319653,47322568,47329951,47333157,47334683,47336535,47340572,47342719,47343555 47283094,47319783,47322708,47330149,47333317,47334819,47336757,47340676,47342830,47346816 Gene ID= ENSG00000114648.11 TPM= 14.49 Transcript Type= protein_coding chr3 47410812 47413435 47410812 47413435 + transcript1251.chr3.nic@PTPN23 transcript1251.chr3.nic protein_coding 47410812,47411783,47412094,47412283,47412514,47412706 47411686,47411967,47412198,47412421,47412627,47413435 Gene ID= ENSG00000076201.14 TPM= 4.53 Transcript Type= NA chr3 47410919 47413435 47410919 47413435 + transcript1252.chr3.nic@PTPN23 transcript1252.chr3.nic protein_coding 47410919,47411783,47412094,47412283,47412514 47411686,47411967,47412198,47412421,47413435 Gene ID= ENSG00000076201.14 TPM= 1.81 Transcript Type= NA chr3 47413721 47475940 47413721 47475940 - transcript1254.chr3.nnic@SCAP transcript1254.chr3.nnic protein_coding 47475799,47466376,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413721 47475940,47466447,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47415180,47414993,47414652,47414386,47414099 Gene ID= ENSG00000114650.18 TPM= 85.06 Transcript Type= NA chr3 47413713 47476113 47413713 47476113 - ENST00000265565.9@SCAP ENST00000265565.9 protein_coding 47475799,47442872,47435008,47428513,47427447,47427157,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713 47476113,47443091,47435137,47428670,47427667,47427262,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417826,47417207,47415180,47414993,47414652,47414386,47414099 Gene ID= ENSG00000114650.18 TPM= 55.33 Transcript Type= protein_coding chr3 47413713 47475955 47413713 47475955 - ENST00000441517.6@SCAP ENST00000441517.6 protein_coding 47475799,47442872,47435008,47425997,47425485,47423933,47422442,47420931,47420554,47419328,47418655,47418321,47418134,47417304,47417122,47415098,47414827,47414572,47414180,47413713 47475955,47443091,47435137,47426169,47425611,47424045,47422536,47421029,47420772,47419704,47418843,47418522,47418249,47417823,47417207,47415180,47414993,47414652,47414386,47414099 Gene ID= ENSG00000114650.18 TPM= 39.78 Transcript Type= nonsense_mediated_decay chr3 47495640 47513363 47495640 47513363 - transcript1285.chr3.nic@ELP6 transcript1285.chr3.nic protein_coding 47512992,47511148,47510184,47504330,47501650,47498286,47495640 47513363,47511226,47510254,47504448,47501851,47498432,47496197 Gene ID= ENSG00000163832.15 TPM= 4.07 Transcript Type= NA chr3 47495640 47513706 47495640 47513706 - transcript1294.chr3.nic@ELP6 transcript1294.chr3.nic protein_coding 47513537,47504330,47501650,47498286,47495640 47513706,47504448,47501851,47498432,47496197 Gene ID= ENSG00000163832.15 TPM= 2.26 Transcript Type= NA chr3 47495640 47513761 47495640 47513761 - ENST00000296149.8@ELP6 ENST00000296149.8 protein_coding 47513537,47511148,47510184,47504330,47501650,47498286,47495640 47513761,47511226,47510254,47504448,47501851,47498432,47496197 Gene ID= ENSG00000163832.15 TPM= 33.05 Transcript Type= protein_coding chr3 47495641 47513709 47495641 47513709 - ENST00000442215.6@ELP6 ENST00000442215.6 protein_coding 47513537,47511148,47504330,47501650,47498286,47495641 47513709,47511226,47504448,47501851,47498432,47496197 Gene ID= ENSG00000163832.15 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr3 47585272 47781917 47585272 47781917 - ENST00000254480.9@SMARCC1 ENST00000254480.9 protein_coding 47781603,47772817,47745908,47738029,47736034,47729025,47720666,47714415,47710683,47706409,47701278,47693241,47689387,47686049,47680437,47678198,47676629,47675475,47670658,47662334,47661294,47638725,47636022,47635190,47622207,47610066,47590661,47585272 47781917,47772936,47745993,47738110,47736126,47729094,47720735,47714490,47710808,47706530,47701402,47693300,47689424,47686170,47680508,47678311,47676782,47675588,47670717,47662592,47661455,47638780,47636136,47635344,47622341,47610327,47590837,47588306 Gene ID= ENSG00000173473.10 TPM= 15.39 Transcript Type= protein_coding chr3 47802928 47850193 47802928 47850193 + ENST00000445061.5@DHX30 ENST00000445061.5 protein_coding 47802928,47805326,47810657,47818022,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867 47803212,47805420,47810711,47818117,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850193 Gene ID= ENSG00000132153.14 TPM= 22.98 Transcript Type= protein_coding chr3 47802909 47816972 47802909 47816972 + ENST00000472718.5@DHX30 ENST00000472718.5 protein_coding 47802909,47805326,47810657,47815963 47803212,47805420,47810711,47816972 Gene ID= ENSG00000132153.14 TPM= 9.06 Transcript Type= retained_intron chr3 47803165 47850193 47803165 47850193 + ENST00000348968.8@DHX30 ENST00000348968.8 protein_coding 47803165,47805326,47810657,47815963,47818022,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867 47803212,47805420,47810711,47816128,47818117,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850193 Gene ID= ENSG00000132153.14 TPM= 6.68 Transcript Type= protein_coding chr3 47803134 47850192 47803134 47850192 + ENST00000395745.6@DHX30 ENST00000395745.6 protein_coding 47803134,47805326,47810657,47818022,47819236,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867 47803212,47805420,47810711,47818117,47819264,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850192 Gene ID= ENSG00000132153.14 TPM= 9.94 Transcript Type= nonsense_mediated_decay chr3 47825028 47850187 47825028 47850187 + ENST00000457607.1@DHX30 ENST00000457607.1 protein_coding 47825028,47827347,47829024,47840877,47841617,47843106,47845700,47846165,47847273,47847432,47847781,47848180,47848469,47848624,47848920,47849192,47849451,47849630,47849867 47825247,47827477,47829134,47841178,47841737,47843255,47845852,47847001,47847348,47847536,47847956,47848386,47848550,47848817,47849079,47849349,47849554,47849769,47850187 Gene ID= ENSG00000132153.14 TPM= 75.29 Transcript Type= protein_coding chr3 47850696 48088895 47850696 48088895 - transcript1320.chr3.nic@MAP4 transcript1320.chr3.nic protein_coding 48088773,47998638,47977865,47928228,47921765,47918719,47915951,47914817,47877417,47875685,47871917,47871227,47870813,47869214,47867246,47857431,47855248,47853163,47850696 48088895,47998879,47977933,47928350,47921878,47918841,47917174,47914939,47877523,47875900,47872100,47871286,47871105,47869327,47867338,47857512,47855360,47853352,47852938 Gene ID= ENSG00000047849.21 TPM= 66.1 Transcript Type= NA chr3 48241060 48270987 48241060 48270987 + transcript1329.chr3.nnic@ZNF589 transcript1329.chr3.nnic protein_coding 48241060,48247625,48260813,48267915,48269064 48241214,48247677,48260939,48268848,48270987 Gene ID= ENSG00000164048.13 TPM= 2.26 Transcript Type= NA chr3 48241100 48270987 48241100 48270987 + ENST00000354698.7@ZNF589 ENST00000354698.7 protein_coding 48241100,48247625,48260813,48267915 48241214,48247677,48260939,48270987 Gene ID= ENSG00000164048.13 TPM= 14.04 Transcript Type= protein_coding chr3 48290247 48301422 48290247 48301422 - transcript1332.chr3.nic@NME6 transcript1332.chr3.nic protein_coding 48301279,48298427,48296727,48296119,48295075,48290247 48301422,48298523,48296829,48296158,48295235,48294803 Gene ID= ENSG00000172113.8 TPM= 9.96 Transcript Type= NA chr3 48403856 48429463 48403856 48429463 - ENST00000358536.8@PLXNB1 ENST00000358536.8 protein_coding 48429253,48425281,48423505,48422765,48422331,48422105,48421674,48421228,48420848,48420665,48419577,48419244,48418917,48418449,48418191,48417911,48416346,48416031,48415583,48415176,48414799,48413895,48413670,48413069,48412742,48412442,48412238,48411863,48410868,48410455,48410296,48409905,48409571,48409329,48407027,48406823,48405724,48403856 48429463,48425333,48424617,48422947,48422459,48422205,48421806,48421384,48420956,48420773,48420257,48419366,48419039,48418542,48418363,48418062,48416451,48416167,48415759,48415347,48415041,48414071,48413818,48413169,48412959,48412620,48412304,48412009,48411036,48410558,48410380,48410077,48409731,48409476,48407091,48406898,48405798,48404590 Gene ID= ENSG00000164050.12 TPM= 10.87 Transcript Type= protein_coding chr3 48432174 48440122 48432174 48440122 - transcript1363.chr3.nic@CCDC51 transcript1363.chr3.nic protein_coding 48440096,48434817,48433707,48432174 48440122,48435136,48433871,48433166 Gene ID= ENSG00000164051.13 TPM= 12 Transcript Type= NA chr3 48432164 48440081 48432164 48440081 - ENST00000447018.5@CCDC51 ENST00000447018.5 protein_coding 48439988,48434817,48433707,48432164 48440081,48435015,48433871,48433166 Gene ID= ENSG00000164051.13 TPM= 6.57 Transcript Type= protein_coding chr3 48432170 48440065 48432170 48440065 - ENST00000395694.6@CCDC51 ENST00000395694.6 protein_coding 48439988,48434817,48433707,48432170 48440065,48435136,48433871,48433166 Gene ID= ENSG00000164051.13 TPM= 17.43 Transcript Type= protein_coding chr3 48432170 48440119 48432170 48440119 - ENST00000412398.6@CCDC51 ENST00000412398.6 protein_coding 48440096,48434817,48433707,48432170 48440119,48435015,48433871,48433166 Gene ID= ENSG00000164051.13 TPM= 3.85 Transcript Type= protein_coding chr3 48440257 48444208 48440257 48444208 + ENST00000438607.2@TMA7 ENST00000438607.2 protein_coding 48440257,48440403,48440541,48443848 48440312,48440458,48440628,48444208 Gene ID= ENSG00000232112.3 TPM= 372.03 Transcript Type= protein_coding chr3 48440284 48444203 48440284 48444203 + ENST00000477624.1@TMA7 ENST00000477624.1 protein_coding 48440284,48440541,48443848 48440458,48440628,48444203 Gene ID= ENSG00000232112.3 TPM= 14.33 Transcript Type= retained_intron chr3 48446699 48461501 48446699 48461501 + transcript1350.chr3.nic@AC134772.2 transcript1350.chr3.nic protein_coding 48446699,48450037,48451729,48454300,48457259,48459359,48459787,48460110 48447092,48450170,48451899,48454418,48457416,48459454,48459916,48461501 Gene ID= ENSG00000282827.2 TPM= 1.81 Transcript Type= NA chr3 48446735 48465656 48446735 48465656 + transcript1347.chr3.nic@ATRIP transcript1347.chr3.nic protein_coding 48446735,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464582,48464831,48465487 48446799,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48464662,48465083,48465656 Gene ID= ENSG00000164053.19 TPM= 3.17 Transcript Type= NA chr3 48446733 48465655 48446733 48465655 + ENST00000320211.8@ATRIP ENST00000320211.8 protein_coding 48446733,48450037,48451729,48454300,48457259,48459359,48459787,48460110,48463745,48464041,48464582,48464831,48465487 48447092,48450170,48451899,48454418,48457416,48459454,48459916,48460799,48463881,48464132,48464662,48465083,48465655 Gene ID= ENSG00000164053.19 TPM= 10.41 Transcript Type= protein_coding chr3 48465788 48467645 48465788 48467645 + transcript1369.chr3.nic@TREX1 transcript1369.chr3.nic protein_coding 48465788,48466251,48466630 48465938,48466309,48467645 Gene ID= ENSG00000213689.11 TPM= 23.54 Transcript Type= NA chr3 48465841 48467644 48465841 48467644 + transcript1370.chr3.nic@TREX1 transcript1370.chr3.nic protein_coding 48465841,48466630,48466740 48466309,48466641,48467644 Gene ID= ENSG00000213689.11 TPM= 3.62 Transcript Type= NA chr3 48465811 48467645 48465811 48467645 + ENST00000433541.1@TREX1 ENST00000433541.1 protein_coding 48465811,48466251,48466630,48466740 48465938,48466309,48466641,48467645 Gene ID= ENSG00000213689.11 TPM= 3.62 Transcript Type= protein_coding chr3 48466262 48467645 48466262 48467645 + ENST00000456089.1@TREX1 ENST00000456089.1 protein_coding 48466262,48467065 48466309,48467645 Gene ID= ENSG00000213689.11 TPM= 2.72 Transcript Type= protein_coding chr3 48467798 48504431 48467798 48504431 - ENST00000296444.6@SHISA5 ENST00000296444.6 protein_coding 48504019,48501137,48479177,48469728,48469361,48467798 48504431,48501293,48479257,48469843,48469573,48469186 Gene ID= ENSG00000164054.15 TPM= 119.91 Transcript Type= protein_coding chr3 48467876 48473208 48467876 48473208 - ENST00000426002.5@SHISA5 ENST00000426002.5 protein_coding 48473010,48469728,48469361,48467876 48473208,48469843,48469573,48469186 Gene ID= ENSG00000164054.15 TPM= 151.61 Transcript Type= protein_coding chr3 48467877 48504795 48467877 48504795 - ENST00000442747.5@SHISA5 ENST00000442747.5 protein_coding 48504423,48501137,48479177,48469728,48469361,48467877 48504795,48501293,48479257,48469843,48469573,48469186 Gene ID= ENSG00000164054.15 TPM= 18.49 Transcript Type= protein_coding chr3 48467876 48473103 48467876 48473103 - ENST00000494854.5@SHISA5 ENST00000494854.5 protein_coding 48473010,48469728,48467876 48473103,48469843,48469573 Gene ID= ENSG00000164054.15 TPM= 7.85 Transcript Type= retained_intron chr3 48467870 48504826 48467870 48504826 - ENST00000444115.5@SHISA5 ENST00000444115.5 protein_coding 48504630,48501137,48479177,48469728,48469361,48467870 48504826,48501293,48479257,48469843,48469573,48469186 Gene ID= ENSG00000164054.15 TPM= 11.25 Transcript Type= protein_coding chr3 48517684 48556890 48517684 48556890 - ENST00000232375.7@PFKFB4 ENST00000232375.7 protein_coding 48556681,48550118,48549864,48543580,48539697,48539254,48538498,48536256,48535512,48525565,48523701,48523537,48521986,48517684 48556890,48550234,48549960,48543646,48539771,48539310,48538619,48536463,48535658,48525669,48523830,48523599,48522050,48519806 Gene ID= ENSG00000114268.11 TPM= 16.3 Transcript Type= protein_coding chr3 48599003 48610037 48599003 48610037 - ENST00000203407.5@UQCRC1 ENST00000203407.5 protein_coding 48609552,48609162,48605770,48604651,48604233,48603564,48601352,48600975,48600680,48600482,48600063,48599635,48599003 48610037,48609302,48605856,48604780,48604431,48603643,48601467,48601118,48600840,48600567,48600151,48599710,48599192 Gene ID= ENSG00000010256.10 TPM= 711.83 Transcript Type= protein_coding chr3 48625719 48635492 48625719 48635492 - transcript1415.chr3.nic@SLC26A6 transcript1415.chr3.nic protein_coding 48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629642,48628622,48628434,48626876,48626631,48626218,48625719 48635492,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48628714,48628541,48628038,48626685,48626354,48626000 Gene ID= ENSG00000225697.12 TPM= 1.81 Transcript Type= NA chr3 48625719 48635492 48625719 48635492 - transcript1416.chr3.nic@SLC26A6 transcript1416.chr3.nic protein_coding 48633477,48633251,48632974,48632245,48631880,48631649,48631253,48630993,48630607,48630438,48630062,48629642,48628622,48628434,48626876,48626631,48626218,48625719 48635492,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48628714,48628541,48628038,48626685,48626354,48626000 Gene ID= ENSG00000225697.12 TPM= 1.81 Transcript Type= NA chr3 48625723 48635483 48625723 48635483 - ENST00000420764.6@SLC26A6 ENST00000420764.6 protein_coding 48635371,48633477,48633251,48632974,48632245,48631880,48631649,48631224,48630993,48630607,48630438,48630062,48629872,48629642,48628622,48628434,48627946,48626876,48626631,48626218,48625723 48635483,48633635,48633390,48633084,48632396,48632044,48631801,48631306,48631140,48630720,48630515,48630157,48629978,48629711,48628714,48628541,48628038,48627052,48626685,48626354,48626000 Gene ID= ENSG00000225697.12 TPM= 15.39 Transcript Type= protein_coding chr3 48664426 48685925 48664426 48685925 - transcript1421.chr3.nnic@NCKIPSD transcript1421.chr3.nnic protein_coding 48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48664426 48685925,48683012,48682552,48682135,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48664960 Gene ID= ENSG00000213672.7 TPM= 3.62 Transcript Type= NA chr3 48673844 48685884 48673844 48685884 - ENST00000416649.6@NCKIPSD ENST00000416649.6 protein_coding 48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844 48685884,48683012,48682552,48682135,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747 Gene ID= ENSG00000213672.7 TPM= 21.73 Transcript Type= protein_coding chr3 48673844 48685927 48673844 48685927 - ENST00000294129.6@NCKIPSD ENST00000294129.6 protein_coding 48685637,48682903,48682348,48682045,48681287,48680059,48679801,48679575,48679377,48679055,48678877,48678564,48673844 48685927,48683012,48682552,48682156,48681780,48680229,48679887,48679713,48679457,48679183,48678969,48678736,48674747 Gene ID= ENSG00000213672.7 TPM= 35.32 Transcript Type= protein_coding chr3 48688003 48717250 48688003 48717250 - ENST00000328631.9@IP6K2 ENST00000328631.9 protein_coding 48717157,48695090,48692954,48691307,48689538,48688003 48717250,48695421,48693179,48691482,48689713,48688773 Gene ID= ENSG00000068745.14 TPM= 43.17 Transcript Type= protein_coding chr3 48688003 48717239 48688003 48717239 - transcript1440.chr3.nic@IP6K2 transcript1440.chr3.nic protein_coding 48717157,48692954,48691307,48689538,48688003 48717239,48695421,48691482,48689713,48688773 Gene ID= ENSG00000068745.14 TPM= 19.62 Transcript Type= NA chr3 48693448 48717216 48693448 48717216 - ENST00000340879.8@IP6K2 ENST00000340879.8 protein_coding 48717157,48695090,48693448 48717216,48695421,48694240 Gene ID= ENSG00000068745.14 TPM= 13.74 Transcript Type= protein_coding chr3 48693488 48717203 48693488 48717203 - ENST00000416707.1@IP6K2 ENST00000416707.1 protein_coding 48717157,48695090,48694694,48693488 48717203,48695418,48694824,48694240 Gene ID= ENSG00000068745.14 TPM= 4.07 Transcript Type= nonsense_mediated_decay chr3 48693521 48717216 48693521 48717216 - ENST00000431721.6@IP6K2 ENST00000431721.6 protein_coding 48717157,48715315,48693521 48717216,48715527,48695421 Gene ID= ENSG00000068745.14 TPM= 3.62 Transcript Type= protein_coding chr3 48746579 48847846 48746579 48847846 - ENST00000265563.12@PRKAR2A ENST00000265563.12 protein_coding 48847335,48807649,48793997,48790544,48782986,48772955,48765248,48765004,48756379,48752176,48746579 48847846,48807684,48794049,48790627,48783092,48773108,48765349,48765078,48756444,48752317,48751718 Gene ID= ENSG00000114302.15 TPM= 19.92 Transcript Type= protein_coding chr3 48856925 48898869 48856925 48898869 - transcript1455.chr3.nnic@SLC25A20 transcript1455.chr3.nnic protein_coding 48898690,48891980,48883997,48879358,48862542,48856925 48898869,48892072,48884124,48879448,48862659,48857772 Gene ID= ENSG00000178537.9 TPM= 1.81 Transcript Type= NA chr3 48918231 48985539 48918231 48985539 + transcript1458.chr3.nic@ARIH2 transcript1458.chr3.nic protein_coding 48918231,48922748,48924718,48927462,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199 48918998,48922811,48924839,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985539 Gene ID= ENSG00000177479.19 TPM= 7.37 Transcript Type= NA chr3 48918861 48985539 48918861 48985539 + transcript1463.chr3.nic@ARIH2 transcript1463.chr3.nic protein_coding 48918861,48922748,48924718,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199 48918998,48922811,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985539 Gene ID= ENSG00000177479.19 TPM= 6.24 Transcript Type= NA chr3 48918821 48985539 48918821 48985539 + transcript1464.chr3.nic@ARIH2 transcript1464.chr3.nic protein_coding 48918821,48922748,48927462,48945136,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199 48918998,48922811,48927813,48945181,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985539 Gene ID= ENSG00000177479.19 TPM= 4.65 Transcript Type= NA chr3 48918842 48985539 48918842 48985539 + transcript1474.chr3.nic@ARIH2 transcript1474.chr3.nic protein_coding 48918842,48924718,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199 48918998,48924839,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48985539 Gene ID= ENSG00000177479.19 TPM= 6.47 Transcript Type= NA chr3 48918842 48937662 48918842 48937662 + transcript1521.chr3.nnic@ARIH2 transcript1521.chr3.nnic protein_coding 48918842,48922748,48924718,48927462,48933566 48918998,48922811,48924839,48927813,48937662 Gene ID= ENSG00000177479.19 TPM= 2.72 Transcript Type= NA chr3 48918843 48928664 48918843 48928664 + transcript1530.chr3.nic@ARIH2 transcript1530.chr3.nic protein_coding 48918843,48922748,48924718,48927462 48918998,48922811,48924839,48928664 Gene ID= ENSG00000177479.19 TPM= 4.53 Transcript Type= NA chr3 48918836 48983620 48918836 48983620 + ENST00000449376.5@ARIH2 ENST00000449376.5 protein_coding 48918836,48922748,48924718,48927462,48961612,48964919,48967125,48968534,48970595,48973699,48974817,48974958,48979482,48980353,48981660,48982896,48983199 48918998,48922811,48924839,48927813,48961679,48964982,48967275,48968655,48970704,48973816,48974867,48974979,48979633,48980496,48981728,48982979,48983620 Gene ID= ENSG00000177479.19 TPM= 2.72 Transcript Type= protein_coding chr3 48989886 49007154 48989886 49007154 + ENST00000383729.8@P4HTM ENST00000383729.8 protein_coding 48989886,48990833,49001438,49002500,49004098,49004861,49005777,49006064,49006687 48990610,48990914,49001628,49002596,49004260,49005046,49005867,49006187,49007154 Gene ID= ENSG00000178467.17 TPM= 238.61 Transcript Type= protein_coding chr3 48989908 49007115 48989908 49007115 + ENST00000472301.5@P4HTM ENST00000472301.5 protein_coding 48989908,48990833,49001438,49002500,49004098,49004861,49006064,49006687 48990610,48990914,49001628,49002596,49004260,49005867,49006187,49007115 Gene ID= ENSG00000178467.17 TPM= 28.07 Transcript Type= retained_intron chr3 49015491 49018588 49015491 49018588 - transcript1490.chr3.nic@DALRD3 transcript1490.chr3.nic protein_coding 49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015819,49015491 49018588,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707 Gene ID= ENSG00000178149.16 TPM= 2.9 Transcript Type= NA chr3 49015490 49018580 49015490 49018580 - transcript1493.chr3.nic@DALRD3 transcript1493.chr3.nic protein_coding 49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015490 49018580,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707 Gene ID= ENSG00000178149.16 TPM= 7.88 Transcript Type= NA chr3 49015490 49018077 49015490 49018077 - transcript1496.chr3.nic@DALRD3 transcript1496.chr3.nic protein_coding 49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015490 49018077,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707 Gene ID= ENSG00000178149.16 TPM= 3.8 Transcript Type= NA chr3 49015488 49018571 49015488 49018571 - ENST00000341949.8@DALRD3 ENST00000341949.8 protein_coding 49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488 49018571,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016086,49015872,49015707 Gene ID= ENSG00000178149.16 TPM= 37.76 Transcript Type= protein_coding chr3 49015488 49018564 49015488 49018564 - ENST00000441576.6@DALRD3 ENST00000441576.6 protein_coding 49018400,49018023,49017613,49017434,49017228,49016774,49016612,49016429,49016158,49015973,49015804,49015488 49018564,49018318,49017869,49017513,49017356,49016847,49016673,49016511,49016340,49016060,49015872,49015707 Gene ID= ENSG00000178149.16 TPM= 5.61 Transcript Type= protein_coding chr3 49021657 49025859 49021657 49025859 + transcript1561.chr3.nic@NDUFAF3 transcript1561.chr3.nic protein_coding 49021657,49022346,49023056 49022221,49022976,49025859 Gene ID= ENSG00000178057.14 TPM= 9.96 Transcript Type= NA chr3 49021605 49023288 49021605 49023288 + ENST00000451378.2@NDUFAF3 ENST00000451378.2 protein_coding 49021605,49022346,49022702,49022876,49023056 49021784,49022538,49022768,49022976,49023288 Gene ID= ENSG00000178057.14 TPM= 2.72 Transcript Type= protein_coding chr3 49022113 49023287 49022113 49023287 + ENST00000496152.1@NDUFAF3 ENST00000496152.1 protein_coding 49022113,49022702,49022876,49023056 49022538,49022768,49022976,49023287 Gene ID= ENSG00000178057.14 TPM= 6.34 Transcript Type= retained_intron chr3 49024325 49029390 49024325 49029390 - ENST00000326739.8@IMPDH2 ENST00000326739.8 protein_coding 49029253,49028758,49028431,49028248,49027710,49026960,49026687,49026519,49026324,49025126,49024896,49024659,49024495,49024325 49029390,49028806,49028532,49028322,49027916,49027047,49026886,49026609,49026419,49025269,49025040,49024802,49024578,49024404 Gene ID= ENSG00000178035.11 TPM= 110.78 Transcript Type= protein_coding chr3 49095932 49105135 49095932 49105135 - ENST00000306125.11@QARS ENST00000306125.11 protein_coding 49104617,49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095932 49105135,49104471,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079 Gene ID= ENSG00000172053.17 TPM= 208.52 Transcript Type= protein_coding chr3 49095932 49104803 49095932 49104803 - transcript1567.chr3.nic@QARS transcript1567.chr3.nic protein_coding 49104617,49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095932 49104803,49104471,49104098,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079 Gene ID= ENSG00000172053.17 TPM= 7.49 Transcript Type= NA chr3 49095939 49104532 49095939 49104532 - ENST00000464962.6@QARS ENST00000464962.6 protein_coding 49104324,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095939 49104532,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079 Gene ID= ENSG00000172053.17 TPM= 11.26 Transcript Type= protein_coding chr3 49095933 49104757 49095933 49104757 - ENST00000430182.5@QARS ENST00000430182.5 protein_coding 49104617,49104373,49103863,49103631,49103345,49102419,49102205,49101828,49101620,49101355,49100575,49100380,49100190,49099961,49099761,49099510,49099344,49099110,49098885,49098600,49098353,49098192,49097992,49095933 49104757,49104471,49103972,49103706,49103409,49102472,49102265,49101899,49101705,49101441,49100674,49100458,49100298,49100091,49099853,49099647,49099431,49099253,49098989,49098692,49098480,49098258,49098117,49096079 Gene ID= ENSG00000172053.17 TPM= 2.96 Transcript Type= nonsense_mediated_decay chr3 49105741 49120934 49105741 49120934 - transcript1577.chr3.nic@USP19 transcript1577.chr3.nic protein_coding 49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49105741 49120934,49119281,49118120,49117785,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528 Gene ID= ENSG00000172046.18 TPM= 21.73 Transcript Type= NA chr3 49108675 49120934 49108675 49120934 - transcript1579.chr3.nic@USP19 transcript1579.chr3.nic protein_coding 49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108675 49120934,49119281,49118120,49117785,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49109185 Gene ID= ENSG00000172046.18 TPM= 3.62 Transcript Type= NA chr3 49108050 49120808 49108050 49120808 - ENST00000417901.5@USP19 ENST00000417901.5 protein_coding 49120756,49119022,49117947,49117657,49117437,49117059,49116727,49116451,49116280,49116047,49115724,49115444,49115228,49114959,49114763,49114174,49113992,49112489,49112284,49111911,49111500,49111255,49110950,49110711,49110444,49110184,49108050 49120808,49119281,49118120,49117830,49117570,49117361,49116943,49116607,49116351,49116162,49115944,49115639,49115361,49115117,49114873,49114284,49114093,49112629,49112402,49112048,49111813,49111365,49111166,49110863,49110604,49110362,49108528 Gene ID= ENSG00000172046.18 TPM= 48.9 Transcript Type= protein_coding chr3 49121114 49133118 49121114 49133118 - ENST00000418109.5@LAMB2 ENST00000418109.5 protein_coding 49132955,49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121114 49133118,49132868,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362 Gene ID= ENSG00000172037.13 TPM= 239.04 Transcript Type= protein_coding chr3 49121133 49133020 49121133 49133020 - ENST00000305544.8@LAMB2 ENST00000305544.8 protein_coding 49132792,49132491,49132270,49132116,49131535,49131379,49130950,49130740,49130231,49129839,49129604,49129245,49129020,49128661,49128458,49126365,49125967,49125747,49125253,49125006,49124701,49124395,49124190,49123728,49123447,49123132,49122704,49122163,49121944,49121684,49121433,49121133 49133020,49132663,49132405,49132189,49131723,49131442,49131152,49130860,49130419,49130018,49129716,49129324,49129152,49128819,49128585,49126497,49126159,49125890,49125484,49125169,49124925,49124612,49124286,49124100,49123631,49123373,49123052,49122370,49122085,49121860,49121592,49121362 Gene ID= ENSG00000172037.13 TPM= 474.05 Transcript Type= protein_coding chr3 49171555 49176494 49171555 49176494 + transcript1633.chr3.nic@KLHDC8B transcript1633.chr3.nic protein_coding 49171555,49172636,49174239,49174742,49175062,49175605 49171685,49172801,49174403,49174966,49175163,49176494 Gene ID= ENSG00000185909.14 TPM= 70.63 Transcript Type= NA chr3 49171584 49176494 49171584 49176494 + transcript1636.chr3.nnic@KLHDC8B transcript1636.chr3.nnic protein_coding 49171584,49172636,49174239,49174721,49175062,49175605 49171685,49173145,49174403,49174966,49175163,49176494 Gene ID= ENSG00000185909.14 TPM= 13.58 Transcript Type= NA chr3 49171611 49176486 49171611 49176486 + ENST00000332780.3@KLHDC8B ENST00000332780.3 protein_coding 49171611,49172636,49174239,49174742,49175062,49175605 49171685,49173145,49174403,49174966,49175163,49176486 Gene ID= ENSG00000185909.14 TPM= 378.52 Transcript Type= protein_coding chr3 49277831 49340033 49277831 49340033 - ENST00000351842.8@USP4 ENST00000351842.8 protein_coding 49339924,49335469,49327686,49325719,49324894,49324702,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49277831 49340033,49335596,49327816,49325845,49325039,49324763,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451 Gene ID= ENSG00000114316.12 TPM= 24 Transcript Type= protein_coding chr3 49278106 49340071 49278106 49340071 - ENST00000265560.8@USP4 ENST00000265560.8 protein_coding 49339924,49335469,49327686,49325719,49324894,49324702,49311514,49310620,49305715,49302384,49300467,49298552,49297870,49294407,49292510,49286098,49284849,49284466,49283987,49280744,49278814,49278106 49340071,49335596,49327816,49325845,49325039,49324763,49311654,49310737,49305888,49302542,49300691,49298635,49297964,49294598,49292598,49286325,49284919,49284584,49284136,49280847,49278902,49278451 Gene ID= ENSG00000114316.12 TPM= 26.71 Transcript Type= protein_coding chr3 49359145 49412202 49359145 49412202 - ENST00000418115.5@RHOA ENST00000418115.5 protein_coding 49411820,49375434,49368428,49362496,49359145 49412202,49375591,49368548,49362626,49360382 Gene ID= ENSG00000067560.10 TPM= 1050.43 Transcript Type= protein_coding chr3 49412206 49416475 49412206 49416475 + ENST00000273590.3@TCTA ENST00000273590.3 protein_coding 49412206,49413056,49414820 49412640,49413110,49416475 Gene ID= ENSG00000145022.4 TPM= 144.89 Transcript Type= protein_coding chr3 49416778 49422554 49416778 49422554 - ENST00000395338.7@AMT ENST00000395338.7 protein_coding 49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49417615,49416778 49422554,49422271,49421572,49420342,49419788,49419405,49419151,49417973,49417718,49417367 Gene ID= ENSG00000145020.15 TPM= 3.62 Transcript Type= protein_coding chr3 49416775 49422753 49416775 49422753 - ENST00000273588.8@AMT ENST00000273588.8 protein_coding 49422361,49422104,49421492,49420211,49419710,49419260,49418971,49417818,49416775 49422753,49422271,49421572,49420342,49419788,49419405,49419151,49417973,49417718 Gene ID= ENSG00000145020.15 TPM= 61.58 Transcript Type= protein_coding chr3 49416794 49422473 49416794 49422473 - ENST00000636991.1@AMT ENST00000636991.1 protein_coding 49422361,49422104,49421492,49419710,49419260,49418971,49417818,49416794 49422473,49422271,49421572,49420342,49419405,49419151,49417973,49417718 Gene ID= ENSG00000145020.15 TPM= 2.72 Transcript Type= retained_intron chr3 49422944 49429315 49422944 49429315 - transcript1701.chr3.nnic@AC104452.1 transcript1701.chr3.nnic protein_coding 49429108,49426252,49425883,49425367,49424949,49424355,49422944 49429315,49426428,49425996,49425438,49425053,49424874,49423514 Gene ID= ENSG00000283189.2 TPM= 2.04 Transcript Type= NA chr3 49422947 49429315 49422947 49429315 - transcript1705.chr3.nnic@AC104452.1 transcript1705.chr3.nnic protein_coding 49429108,49426252,49425883,49425367,49424949,49424161,49422947 49429315,49426428,49425996,49425438,49425053,49424874,49423505 Gene ID= ENSG00000283189.2 TPM= 2.04 Transcript Type= NA chr3 49422946 49429326 49422946 49429326 - ENST00000273598.7@NICN1 ENST00000273598.7 protein_coding 49429108,49426252,49425883,49425367,49424949,49422946 49429326,49426428,49425996,49425438,49425053,49424874 Gene ID= ENSG00000145029.13 TPM= 1.13 Transcript Type= protein_coding chr3 49422947 49429288 49422947 49429288 - ENST00000615713.4@NICN1 ENST00000615713.4 protein_coding 49429108,49426252,49425883,49425367,49424949,49424162,49422947 49429288,49426428,49425996,49425438,49425053,49424874,49423505 Gene ID= ENSG00000145029.13 TPM= 5.66 Transcript Type= protein_coding chr3 49422993 49429308 49422993 49429308 - ENST00000423832.5@NICN1 ENST00000423832.5 protein_coding 49429108,49426252,49425883,49425367,49424949,49424075,49422993 49429308,49426428,49425996,49425438,49425053,49424874,49423563 Gene ID= ENSG00000145029.13 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr3 49470132 49535615 49470132 49535615 + ENST00000308775.6@DAG1 ENST00000308775.6 protein_coding 49470132,49510419,49530797 49470433,49510819,49535615 Gene ID= ENSG00000173402.11 TPM= 33.51 Transcript Type= protein_coding chr3 49674002 49683963 49674002 49683963 + ENST00000296456.9@APEH ENST00000296456.9 protein_coding 49674002,49674489,49675183,49675694,49675891,49676056,49676378,49676609,49676777,49676903,49677573,49678852,49679593,49680541,49681101,49681722,49681887,49682348,49682546,49682843,49683040,49683237 49674413,49674621,49675309,49675787,49675966,49676219,49676515,49676700,49676817,49677024,49677633,49678949,49679644,49680629,49681239,49681805,49681967,49682436,49682736,49682945,49683146,49683963 Gene ID= ENSG00000164062.12 TPM= 243.59 Transcript Type= protein_coding chr3 49683922 49689516 49683922 49689516 - transcript1751.chr3.nic@MST1 transcript1751.chr3.nic protein_coding 49688598,49687750,49687556,49687364,49687149,49686947,49686684,49686062,49685860,49685596,49685471,49685262,49685012,49684738,49684550,49684314,49683922 49689516,49687897,49687668,49687478,49687285,49687067,49686802,49686481,49685962,49685732,49685506,49685382,49685089,49684884,49684656,49684453,49684189 Gene ID= ENSG00000173531.15 TPM= 4.53 Transcript Type= NA chr3 49689499 49721527 49689499 49721527 + ENST00000327697.10@RNF123 ENST00000327697.10 protein_coding 49689499,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185 49689606,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705182,49705679,49706065,49706898,49712656,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721527 Gene ID= ENSG00000164068.15 TPM= 62.1 Transcript Type= protein_coding chr3 49689544 49721527 49689544 49721527 + ENST00000457726.5@RNF123 ENST00000457726.5 protein_coding 49689544,49691130,49691425,49697143,49697363,49697885,49698052,49698440,49698755,49698980,49699468,49699668,49700227,49700472,49700636,49701491,49701811,49702083,49702334,49702633,49703427,49704650,49704984,49705534,49705982,49706791,49712479,49713513,49713738,49713910,49714090,49715575,49715822,49716102,49716393,49720511,49720800,49721020,49721185 49689606,49691247,49691509,49697222,49697457,49697939,49698137,49698526,49698822,49699105,49699582,49699772,49700352,49700564,49700709,49701608,49701910,49702144,49702405,49702753,49703528,49704756,49705186,49705679,49706065,49706898,49712892,49713587,49713825,49713997,49714174,49715714,49716010,49716177,49716477,49720653,49720894,49721105,49721527 Gene ID= ENSG00000164068.15 TPM= 3.24 Transcript Type= nonsense_mediated_decay chr3 49719924 49723951 49719924 49723951 - ENST00000308375.10@GMPPB ENST00000308375.10 protein_coding 49723598,49723392,49723254,49722972,49722596,49722432,49722231,49719924 49723951,49723472,49723302,49723114,49722754,49722510,49722358,49722147 Gene ID= ENSG00000173540.12 TPM= 5.43 Transcript Type= protein_coding chr3 49721476 49723949 49721476 49723949 - ENST00000308388.6@GMPPB ENST00000308388.6 protein_coding 49723598,49723392,49723254,49722972,49722596,49722432,49722231,49721965,49721476 49723949,49723472,49723302,49723114,49722754,49722510,49722358,49722147,49721883 Gene ID= ENSG00000173540.12 TPM= 54.79 Transcript Type= protein_coding chr3 49724295 49786541 49724295 49786541 - transcript1765.chr3.nnic@IP6K1 transcript1765.chr3.nnic protein_coding 49786354,49785393,49747818,49738212,49732791,49728103,49724295 49786541,49785500,49748168,49738422,49732972,49728278,49727655 Gene ID= ENSG00000176095.11 TPM= 15.24 Transcript Type= NA chr3 49724295 49786540 49724295 49786540 - ENST00000395238.5@IP6K1 ENST00000395238.5 protein_coding 49786354,49738212,49732791,49728103,49724295 49786540,49738422,49732972,49728278,49727655 Gene ID= ENSG00000176095.11 TPM= 14.79 Transcript Type= protein_coding chr3 49724294 49786527 49724294 49786527 - ENST00000321599.8@IP6K1 ENST00000321599.8 protein_coding 49786354,49747818,49738212,49732791,49728103,49724294 49786527,49748168,49738422,49732972,49728278,49727655 Gene ID= ENSG00000176095.11 TPM= 44.22 Transcript Type= protein_coding chr3 49803254 49805030 49803254 49805030 + ENST00000333323.4@FAM212A ENST00000333323.4 protein_coding 49803254,49804181 49803443,49805030 Gene ID= ENSG00000185614.4 TPM= 2.72 Transcript Type= protein_coding chr3 49805204 49813965 49805204 49813965 - transcript1785.chr3.nnic@UBA7 transcript1785.chr3.nnic protein_coding 49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49808976,49808386,49808020,49807736,49806073,49805897,49805204 49813965,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809159,49808468,49808112,49807927,49806165,49805997,49805437 Gene ID= ENSG00000182179.12 TPM= 9.96 Transcript Type= NA chr3 49805204 49813965 49805204 49813965 - transcript1787.chr3.nnic@UBA7 transcript1787.chr3.nnic protein_coding 49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809650,49808976,49808386,49808020,49807736,49806073,49805897,49805204 49813965,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809159,49808468,49808112,49807927,49806165,49805997,49805437 Gene ID= ENSG00000182179.12 TPM= 2.72 Transcript Type= NA chr3 49805204 49813965 49805204 49813965 - transcript1793.chr3.nic@UBA7 transcript1793.chr3.nic protein_coding 49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805204 49813965,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437 Gene ID= ENSG00000182179.12 TPM= 3.62 Transcript Type= NA chr3 49805204 49813965 49805204 49813965 - transcript1795.chr3.nic@UBA7 transcript1795.chr3.nic protein_coding 49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49808976,49808386,49808020,49807736,49806073,49805897,49805204 49813965,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49808468,49808112,49807927,49806165,49805997,49805437 Gene ID= ENSG00000182179.12 TPM= 3.02 Transcript Type= NA chr3 49805204 49813965 49805204 49813965 - transcript1802.chr3.nic@UBA7 transcript1802.chr3.nic protein_coding 49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49810984,49810752,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805204 49813965,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49810832,49810672,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437 Gene ID= ENSG00000182179.12 TPM= 2.72 Transcript Type= NA chr3 49805207 49813946 49805207 49813946 - ENST00000333486.3@UBA7 ENST00000333486.3 protein_coding 49813732,49813479,49813249,49813062,49812648,49812408,49812109,49811870,49811273,49810984,49810752,49810517,49810263,49809978,49809815,49809542,49809390,49808976,49808386,49808020,49807736,49806073,49805897,49805207 49813946,49813647,49813383,49813168,49812738,49812543,49812206,49812016,49811455,49811091,49810832,49810672,49810428,49810183,49809879,49809725,49809464,49809159,49808468,49808112,49807927,49806165,49805997,49805437 Gene ID= ENSG00000182179.12 TPM= 52.52 Transcript Type= protein_coding chr3 49908862 49930145 49908862 49930145 - ENST00000296473.7@MON1A ENST00000296473.7 protein_coding 49929609,49913220,49911526,49910119,49909253,49908862 49930145,49913359,49912011,49910884,49909400,49909154 Gene ID= ENSG00000164077.13 TPM= 21.73 Transcript Type= protein_coding chr3 49908865 49929877 49908865 49929877 - transcript1826.chr3.nic@MON1A transcript1826.chr3.nic protein_coding 49929609,49913220,49910119,49909253,49908865 49929877,49913359,49912011,49909400,49909154 Gene ID= ENSG00000164077.13 TPM= 2.72 Transcript Type= NA chr3 49908873 49929889 49908873 49929889 - ENST00000455683.6@MON1A ENST00000455683.6 protein_coding 49929609,49913220,49910119,49909253,49908873 49929889,49913359,49910884,49909400,49909154 Gene ID= ENSG00000164077.13 TPM= 2.72 Transcript Type= protein_coding chr3 49940085 50077255 49940085 50077255 + transcript1829.chr3.nnic@RBM6 transcript1829.chr3.nnic protein_coding 49940085,49962576,49967470,49972059,49975323,49999440,50047160,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,49968748,49972148,49975392,49999513,50047326,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077255 Gene ID= ENSG00000004534.14 TPM= 1.81 Transcript Type= NA chr3 49940033 50077252 49940033 50077252 + ENST00000266022.8@RBM6 ENST00000266022.8 protein_coding 49940033,49962576,49967470,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077252 Gene ID= ENSG00000004534.14 TPM= 17.66 Transcript Type= protein_coding chr3 49940443 50077255 49940443 50077255 + transcript1835.chr3.nnic@RBM6 transcript1835.chr3.nnic protein_coding 49940443,49962576,49967470,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940549,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077255 Gene ID= ENSG00000004534.14 TPM= 2.26 Transcript Type= NA chr3 49940033 50077255 49940033 50077255 + transcript1837.chr3.nic@RBM6 transcript1837.chr3.nic protein_coding 49940033,49962576,49967470,49972059,49975323,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,49968748,49972148,49975392,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077255 Gene ID= ENSG00000004534.14 TPM= 5.43 Transcript Type= NA chr3 49940110 50077255 49940110 50077255 + transcript1838.chr3.nic@RBM6 transcript1838.chr3.nic protein_coding 49940110,49962576,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077255 Gene ID= ENSG00000004534.14 TPM= 2.17 Transcript Type= NA chr3 49940096 50077255 49940096 50077255 + transcript1844.chr3.nnic@RBM6 transcript1844.chr3.nnic protein_coding 49940096,49962576,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061983,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077255 Gene ID= ENSG00000004534.14 TPM= 2.17 Transcript Type= NA chr3 49940007 50077249 49940007 50077249 + ENST00000442092.5@RBM6 ENST00000442092.5 protein_coding 49940007,49962576,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077249 Gene ID= ENSG00000004534.14 TPM= 9.42 Transcript Type= protein_coding chr3 49940041 50077248 49940041 50077248 + ENST00000443081.5@RBM6 ENST00000443081.5 protein_coding 49940041,49962576,49967198,49972059,49975323,49999440,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,49968748,49972148,49975392,49999513,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077248 Gene ID= ENSG00000004534.14 TPM= 3.62 Transcript Type= protein_coding chr3 49940063 50077248 49940063 50077248 + ENST00000419610.5@RBM6 ENST00000419610.5 protein_coding 49940063,49962576,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077248 Gene ID= ENSG00000004534.14 TPM= 1.27 Transcript Type= nonsense_mediated_decay chr3 49940102 50077248 49940102 50077248 + ENST00000422955.5@RBM6 ENST00000422955.5 protein_coding 49940102,49962576,49972059,49975323,50048245,50054335,50057728,50058402,50059649,50060956,50061140,50061462,50061962,50065031,50066242,50068690,50070455,50075201,50077008 49940225,49962685,49972148,49975392,50048319,50054395,50058003,50058562,50059746,50060998,50061221,50061547,50062108,50065126,50066502,50068764,50070552,50075330,50077248 Gene ID= ENSG00000004534.14 TPM= 3.08 Transcript Type= protein_coding chr3 50088892 50118964 50088892 50118964 + transcript1851.chr3.nic@RBM5 transcript1851.chr3.nic protein_coding 50088892,50090382,50092043,50093720,50099982,50103083,50104248,50105077,50105549,50106767,50107482,50108070,50108232,50109603,50110379,50110679,50113383,50113950,50114180,50115428,50115906,50117074,50117250,50118331 50089029,50090451,50092208,50093875,50100051,50103166,50104308,50105142,50105709,50106864,50107569,50108147,50108304,50109688,50110463,50110770,50113544,50114099,50114251,50115607,50115980,50117171,50117379,50118964 Gene ID= ENSG00000003756.16 TPM= 10.87 Transcript Type= NA chr3 50155058 50189074 50155058 50189074 + transcript1856.chr3.nic@SEMA3F transcript1856.chr3.nic protein_coding 50155058,50159575,50173793,50174052,50174231,50176768,50182284,50182644,50182904,50183186,50183420,50184592,50185443,50185666,50185889,50186281,50186613,50187705 50155564,50159734,50173953,50174114,50174350,50176861,50182403,50182783,50183018,50183255,50183564,50184814,50185531,50185707,50186046,50186348,50186746,50189074 Gene ID= ENSG00000001617.11 TPM= 6.34 Transcript Type= NA chr3 50229065 50259345 50229065 50259345 + ENST00000491100.5@GNAI2 ENST00000491100.5 protein_coding 50229065,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368 50230998,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50259345 Gene ID= ENSG00000114353.16 TPM= 2.11 Transcript Type= processed_transcript chr3 50235952 50259355 50235952 50259355 + ENST00000313601.10@GNAI2 ENST00000313601.10 protein_coding 50235952,50252100,50252397,50253024,50256192,50256723,50256937,50257500,50258368 50236453,50252142,50252538,50253184,50256320,50256852,50257090,50257714,50259355 Gene ID= ENSG00000114353.16 TPM= 341.24 Transcript Type= protein_coding chr3 50236204 50259354 50236204 50259354 + ENST00000441156.5@GNAI2 ENST00000441156.5 protein_coding 50236204,50252397,50253024,50256192,50256723,50256937,50257500,50258368 50236453,50252538,50253184,50256320,50256852,50257090,50257714,50259354 Gene ID= ENSG00000114353.16 TPM= 12.52 Transcript Type= nonsense_mediated_decay chr3 50265958 50271559 50265958 50271559 - transcript1915.chr3.nnic@SEMA3B-AS1 transcript1915.chr3.nnic antisense_RNA 50271413,50268170,50265958 50271559,50268317,50266887 Gene ID= ENSG00000232352.1 TPM= 3.62 Transcript Type= NA chr3 50267608 50277139 50267608 50277139 + ENST00000618865.4@SEMA3B ENST00000618865.4 protein_coding 50267608,50269161,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302 50267769,50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277139 Gene ID= ENSG00000012171.19 TPM= 46.51 Transcript Type= protein_coding chr3 50269006 50277179 50269006 50277179 + ENST00000616701.4@SEMA3B ENST00000616701.4 protein_coding 50269006,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273913,50274363,50274843,50275012,50275302,50275560,50275705,50276302 50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277179 Gene ID= ENSG00000012171.19 TPM= 821.84 Transcript Type= protein_coding chr3 50269169 50277142 50269169 50277142 + ENST00000433753.4@SEMA3B ENST00000433753.4 protein_coding 50269169,50270127,50270433,50270890,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302 50269349,50270284,50270495,50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277142 Gene ID= ENSG00000012171.19 TPM= 127.87 Transcript Type= protein_coding chr3 50270561 50277170 50270561 50277170 + ENST00000441915.5@SEMA3B ENST00000441915.5 protein_coding 50270561,50271088,50271361,50273298,50273535,50273759,50273916,50274363,50274843,50275012,50275302,50275560,50275705,50276302 50271009,50271181,50271480,50273443,50273646,50273828,50274057,50274582,50274934,50275053,50275459,50275615,50275844,50277170 Gene ID= ENSG00000012171.19 TPM= 55.77 Transcript Type= retained_intron chr3 50287732 50292595 50287732 50292595 - ENST00000417626.6@IFRD2 ENST00000417626.6 protein_coding 50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50288409,50287732 50292595,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504,50288271 Gene ID= ENSG00000214706.10 TPM= 181.06 Transcript Type= protein_coding chr3 50287734 50292432 50287734 50292432 - transcript1931.chr3.nic@IFRD2 transcript1931.chr3.nic protein_coding 50292217,50290560,50290388,50290170,50289929,50289712,50289447,50289255,50288800,50288583,50287734 50292432,50290679,50290472,50290294,50290086,50289762,50289628,50289360,50288937,50288711,50288504 Gene ID= ENSG00000214706.10 TPM= 10.22 Transcript Type= NA chr3 50292831 50299468 50292831 50299468 - ENST00000336307.5@HYAL3 ENST00000336307.5 protein_coding 50299213,50294709,50293632,50292831 50299468,50295619,50293721,50293515 Gene ID= ENSG00000186792.16 TPM= 2.72 Transcript Type= protein_coding chr3 50296418 50299421 50296418 50299421 - ENST00000443094.2@NAT6 ENST00000443094.2 protein_coding 50299213,50296418 50299421,50297672 Gene ID= ENSG00000243477.5 TPM= 7.24 Transcript Type= protein_coding chr3 50296402 50299416 50296402 50299416 - ENST00000354862.4@NAT6 ENST00000354862.4 protein_coding 50299213,50296402 50299416,50297527 Gene ID= ENSG00000243477.5 TPM= 1.81 Transcript Type= protein_coding chr3 50299889 50303620 50299889 50303620 - ENST00000395144.6@HYAL1 ENST00000395144.6 protein_coding 50303466,50302057,50300988,50299889 50303620,50302980,50301077,50300800 Gene ID= ENSG00000114378.16 TPM= 37.13 Transcript Type= protein_coding chr3 50299890 50303572 50299890 50303572 - ENST00000266031.8@HYAL1 ENST00000266031.8 protein_coding 50302057,50300988,50299890 50303572,50301077,50300800 Gene ID= ENSG00000114378.16 TPM= 8.15 Transcript Type= protein_coding chr3 50317812 50322777 50317812 50322777 - ENST00000442581.1@HYAL2 ENST00000442581.1 protein_coding 50322653,50321366,50319569,50318956,50317812 50322777,50321773,50320535,50319045,50318539 Gene ID= ENSG00000068001.13 TPM= 95.99 Transcript Type= protein_coding chr3 50317790 50322782 50317790 50322782 - ENST00000447092.5@HYAL2 ENST00000447092.5 protein_coding 50319569,50318956,50317790 50322782,50319045,50318539 Gene ID= ENSG00000068001.13 TPM= 6.34 Transcript Type= protein_coding chr3 50324909 50328221 50324909 50328221 - transcript1961.chr3.nic@TUSC2 transcript1961.chr3.nic protein_coding 50327954,50327038,50326357,50324909 50328221,50327224,50326477,50326186 Gene ID= ENSG00000114383.9 TPM= 1.81 Transcript Type= NA chr3 50324907 50328243 50324907 50328243 - ENST00000232496.4@TUSC2 ENST00000232496.4 protein_coding 50327954,50326357,50324907 50328243,50326477,50326186 Gene ID= ENSG00000114383.9 TPM= 74.25 Transcript Type= protein_coding chr3 50329788 50340912 50329788 50340912 - ENST00000359365.8@RASSF1 ENST00000359365.8 protein_coding 50340556,50337905,50332050,50331559,50331334,50329788 50340912,50338011,50332154,50331856,50331449,50330727 Gene ID= ENSG00000068028.17 TPM= 9.06 Transcript Type= protein_coding chr3 50329785 50338184 50329785 50338184 - transcript1957.chr3.nic@RASSF1 transcript1957.chr3.nic protein_coding 50337905,50332050,50331559,50331334,50329785 50338184,50332154,50331856,50331449,50330727 Gene ID= ENSG00000068028.17 TPM= 1.81 Transcript Type= NA chr3 50329782 50337464 50329782 50337464 - ENST00000327761.7@RASSF1 ENST00000327761.7 protein_coding 50337173,50332050,50331559,50331334,50329782 50337464,50332154,50331856,50331449,50330727 Gene ID= ENSG00000068028.17 TPM= 22.64 Transcript Type= protein_coding chr3 50347488 50351091 50347488 50351091 - ENST00000232501.7@NPRL2 ENST00000232501.7 protein_coding 50350575,50349931,50349665,50349386,50348874,50348685,50348527,50348317,50348124,50347759,50347488 50351091,50350022,50349833,50349494,50349010,50348782,50348563,50348410,50348241,50347901,50347673 Gene ID= ENSG00000114388.12 TPM= 48.9 Transcript Type= protein_coding chr3 50350695 50354079 50350695 50354079 + ENST00000425346.5@CYB561D2 ENST00000425346.5 protein_coding 50350695,50351409,50352009,50353241 50350984,50351560,50352046,50354079 Gene ID= ENSG00000114395.10 TPM= 21.73 Transcript Type= protein_coding chr3 50350845 50354069 50350845 50354069 + ENST00000232508.9@CYB561D2 ENST00000232508.9 protein_coding 50350845,50351343,50352009,50353241 50350984,50351560,50352046,50354069 Gene ID= ENSG00000114395.10 TPM= 6.34 Transcript Type= protein_coding chr3 50350858 50354032 50350858 50354032 + ENST00000418577.1@CYB561D2 ENST00000418577.1 protein_coding 50350858,50352009,50353241 50351560,50352046,50354032 Gene ID= ENSG00000114395.10 TPM= 8.15 Transcript Type= protein_coding chr3 50354749 50359610 50354749 50359610 - ENST00000266025.3@TMEM115 ENST00000266025.3 protein_coding 50358213,50354749 50359610,50355547 Gene ID= ENSG00000126062.3 TPM= 170.24 Transcript Type= protein_coding chr3 50558032 50567789 50558032 50567789 - transcript1993.chr3.nnic@C3orf18 transcript1993.chr3.nnic protein_coding 50567463,50561722,50558032 50567789,50561747,50559737 Gene ID= ENSG00000088543.14 TPM= 2.42 Transcript Type= NA chr3 50558031 50567751 50558031 50567751 - ENST00000357203.7@C3orf18 ENST00000357203.7 protein_coding 50567463,50566006,50565466,50561722,50560917,50558031 50567751,50566094,50565861,50561747,50561064,50559737 Gene ID= ENSG00000088543.14 TPM= 4.23 Transcript Type= protein_coding chr3 50558025 50567665 50558025 50567665 - ENST00000426034.5@C3orf18 ENST00000426034.5 protein_coding 50567463,50565466,50561722,50560917,50558025 50567665,50565861,50561747,50561064,50559737 Gene ID= ENSG00000088543.14 TPM= 3.32 Transcript Type= protein_coding chr3 50569499 50580681 50569499 50580681 + transcript1998.chr3.nnic@HEMK1 transcript1998.chr3.nnic protein_coding 50569499,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381 50569574,50571294,50571801,50572208,50577186,50577573,50577875,50579740,50579939,50580229,50580681 Gene ID= ENSG00000114735.9 TPM= 1.81 Transcript Type= NA chr3 50569489 50580681 50569489 50580681 + transcript2002.chr3.nnic@HEMK1 transcript2002.chr3.nnic protein_coding 50569489,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381 50569574,50571332,50571801,50572208,50577186,50577573,50577875,50579740,50579939,50580229,50580681 Gene ID= ENSG00000114735.9 TPM= 2.72 Transcript Type= NA chr3 50569493 50580672 50569493 50580672 + ENST00000455834.5@HEMK1 ENST00000455834.5 protein_coding 50569493,50570931,50571710,50572115,50577052,50577509,50577826,50578821,50579844,50580116,50580381 50569545,50571332,50571801,50572208,50577186,50577573,50577875,50578926,50579939,50580229,50580672 Gene ID= ENSG00000114735.9 TPM= 5.43 Transcript Type= protein_coding chr3 50606522 50611831 50606522 50611831 - ENST00000348721.3@CISH ENST00000348721.3 protein_coding 50611631,50608373,50606522 50611831,50608593,50608142 Gene ID= ENSG00000114737.15 TPM= 10.87 Transcript Type= protein_coding chr3 50617314 50649299 50617314 50649299 + transcript2019.chr3.nic@MAPKAPK3 transcript2019.chr3.nic protein_coding 50617314,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894 50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649299 Gene ID= ENSG00000114738.10 TPM= 14.19 Transcript Type= NA chr3 50617131 50649297 50617131 50649297 + ENST00000621469.4@MAPKAPK3 ENST00000621469.4 protein_coding 50617131,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894 50617241,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649297 Gene ID= ENSG00000114738.10 TPM= 53.13 Transcript Type= protein_coding chr3 50617170 50649288 50617170 50649288 + ENST00000357955.6@MAPKAPK3 ENST00000357955.6 protein_coding 50617170,50617514,50640366,50641707,50642253,50644409,50645710,50646140,50646740,50647123,50647894 50617226,50617784,50640505,50641771,50642332,50644532,50645785,50646264,50646825,50647203,50649288 Gene ID= ENSG00000114738.10 TPM= 36.83 Transcript Type= protein_coding chr3 51385047 51389397 51385047 51389397 + ENST00000528157.5@MANF ENST00000528157.5 protein_coding 51385047,51386208,51387737,51388905 51385436,51386335,51387878,51389397 Gene ID= ENSG00000145050.15 TPM= 28.98 Transcript Type= protein_coding chr3 51397841 51500116 51397841 51500116 - transcript2020.chr3.nnic@DCAF1 transcript2020.chr3.nnic protein_coding 51499873,51496734,51492385,51483719,51470929,51466803,51463114,51443766,51441385,51440970,51433106,51430033,51429261,51427372,51422307,51419734,51418678,51418116,51416787,51414624,51413950,51413282,51412993,51412379,51403143,51397841 51500116,51496780,51492488,51483834,51471005,51466876,51463227,51443903,51441897,51441071,51433264,51430212,51429470,51427541,51422431,51420997,51418876,51418198,51416871,51414857,51414043,51413386,51413066,51412480,51403395,51398827 Gene ID= ENSG00000145041.15 TPM= 12.07 Transcript Type= NA chr3 51397842 51500115 51397842 51500115 - transcript2022.chr3.nnic@DCAF1 transcript2022.chr3.nnic protein_coding 51499873,51492385,51483719,51470929,51466803,51463114,51443766,51441385,51440970,51433106,51430033,51429261,51427372,51422307,51419734,51418678,51418116,51416787,51414624,51413950,51413282,51412993,51412379,51403143,51397842 51500115,51492488,51483834,51471005,51466876,51463227,51443903,51441897,51441071,51433264,51430212,51429470,51427541,51422431,51420997,51418876,51418198,51416871,51414857,51414043,51413386,51413066,51412480,51403395,51398827 Gene ID= ENSG00000145041.15 TPM= 4.83 Transcript Type= NA chr3 51397841 51500116 51397841 51500116 - transcript2024.chr3.nic@DCAF1 transcript2024.chr3.nic protein_coding 51499873,51483719,51470929,51466803,51463114,51443766,51441385,51440970,51433106,51430033,51429261,51427372,51422307,51419734,51418678,51418116,51416787,51414624,51413950,51413282,51412993,51412379,51403143,51397841 51500116,51483836,51471005,51466876,51463227,51443903,51441897,51441071,51433264,51430212,51429470,51427541,51422431,51420997,51418876,51418198,51416871,51414857,51414043,51413386,51413066,51412480,51403395,51398827 Gene ID= ENSG00000145041.15 TPM= 11.17 Transcript Type= NA chr3 51671175 51704322 51671175 51704322 + ENST00000611400.4@TEX264 ENST00000611400.4 protein_coding 51671175,51672210,51674271,51684413,51699406,51703724 51671288,51672301,51674562,51684634,51699574,51704322 Gene ID= ENSG00000164081.12 TPM= 19.41 Transcript Type= protein_coding chr3 51671175 51704322 51671175 51704322 + ENST00000457573.5@TEX264 ENST00000457573.5 protein_coding 51671175,51672341,51674271,51684413,51699406,51703724 51671288,51672392,51674562,51684634,51699574,51704322 Gene ID= ENSG00000164081.12 TPM= 7.63 Transcript Type= protein_coding chr3 51671175 51704322 51671175 51704322 + ENST00000614067.4@TEX264 ENST00000614067.4 protein_coding 51671175,51674271,51699406,51703724 51671288,51674562,51699574,51704322 Gene ID= ENSG00000164081.12 TPM= 1.03 Transcript Type= protein_coding chr3 51671232 51704323 51671232 51704323 + ENST00000341333.9@TEX264 ENST00000341333.9 protein_coding 51671232,51674271,51684413,51699406,51703724 51671288,51674562,51684634,51699574,51704323 Gene ID= ENSG00000164081.12 TPM= 185.12 Transcript Type= protein_coding chr3 51671274 51704321 51671274 51704321 + ENST00000395057.5@TEX264 ENST00000395057.5 protein_coding 51671274,51674271,51684413,51699406,51703724 51671547,51674562,51684634,51699574,51704321 Gene ID= ENSG00000164081.12 TPM= 4.69 Transcript Type= protein_coding chr3 51671296 51704317 51671296 51704317 + ENST00000416589.5@TEX264 ENST00000416589.5 protein_coding 51671296,51674271,51684413,51699406,51703724 51671331,51674562,51684634,51699574,51704317 Gene ID= ENSG00000164081.12 TPM= 4.24 Transcript Type= protein_coding chr3 51671255 51704283 51671255 51704283 + ENST00000415259.5@TEX264 ENST00000415259.5 protein_coding 51671255,51674271,51684413,51699406,51703724 51672301,51674562,51684634,51699574,51704283 Gene ID= ENSG00000164081.12 TPM= 1.81 Transcript Type= protein_coding chr3 51933425 51941904 51933425 51941904 - transcript2055.chr3.nnic@RRP9 transcript2055.chr3.nnic protein_coding 51941781,51941409,51938095,51937669,51937545,51937192,51936442,51936257,51935592,51935342,51935197,51934631,51934472,51933708,51933425 51941904,51941491,51938204,51937736,51937586,51937318,51936555,51936349,51935692,51935476,51935259,51934776,51934551,51933781,51933599 Gene ID= ENSG00000114767.6 TPM= 1.81 Transcript Type= NA chr3 51933430 51941941 51933430 51941941 - ENST00000232888.6@RRP9 ENST00000232888.6 protein_coding 51941781,51941409,51938095,51937669,51937545,51937192,51936431,51936257,51935592,51935342,51935197,51934631,51934472,51933708,51933430 51941941,51941491,51938204,51937736,51937586,51937318,51936555,51936349,51935692,51935476,51935259,51934776,51934551,51933781,51933599 Gene ID= ENSG00000114767.6 TPM= 47.99 Transcript Type= protein_coding chr3 51942379 51951452 51942379 51951452 + transcript2066.chr3.nic@PARP3 transcript2066.chr3.nic protein_coding 51942379,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311 51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51951452 Gene ID= ENSG00000041880.14 TPM= 5.73 Transcript Type= NA chr3 51943250 51951452 51943250 51951452 + transcript2072.chr3.nic@PARP3 transcript2072.chr3.nic protein_coding 51943250,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311 51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51951452 Gene ID= ENSG00000041880.14 TPM= 15.69 Transcript Type= NA chr3 51942359 51948862 51942359 51948862 + ENST00000398755.7@PARP3 ENST00000398755.7 protein_coding 51942359,51943354,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311 51942708,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862 Gene ID= ENSG00000041880.14 TPM= 20.45 Transcript Type= protein_coding chr3 51942345 51948862 51942345 51948862 + ENST00000417220.6@PARP3 ENST00000417220.6 protein_coding 51942345,51942930,51943349,51944089,51944390,51944778,51944998,51945495,51945853,51946166,51947740,51948311 51942708,51943046,51943538,51944217,51944578,51944910,51945224,51945644,51945939,51946343,51947895,51948862 Gene ID= ENSG00000041880.14 TPM= 64.82 Transcript Type= protein_coding chr3 51957457 51967505 51957457 51967505 - transcript2084.chr3.nic@PCBP4 transcript2084.chr3.nic protein_coding 51967326,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957457 51967505,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152 Gene ID= ENSG00000090097.21 TPM= 4.07 Transcript Type= NA chr3 51957457 51967507 51957457 51967507 - transcript2093.chr3.nic@PCBP4 transcript2093.chr3.nic protein_coding 51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957457 51967507,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958152 Gene ID= ENSG00000090097.21 TPM= 8.6 Transcript Type= NA chr3 51957454 51967457 51957454 51967457 - ENST00000355852.6@PCBP4 ENST00000355852.6 protein_coding 51967326,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957454 51967457,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349 Gene ID= ENSG00000090097.21 TPM= 20.37 Transcript Type= protein_coding chr3 51957458 51967445 51957458 51967445 - ENST00000461554.5@PCBP4 ENST00000461554.5 protein_coding 51967326,51961941,51961160,51961010,51960866,51960526,51960189,51959895,51959577,51959367,51959229,51959047,51958790,51957458 51967445,51962088,51961304,51961033,51960898,51960642,51960320,51960023,51959651,51959411,51959292,51959099,51958959,51958349 Gene ID= ENSG00000090097.21 TPM= 3.17 Transcript Type= protein_coding chr3 51968510 51983409 51968510 51983409 - ENST00000483233.5@ABHD14B ENST00000483233.5 protein_coding 51983201,51973965,51971460,51969943,51968510 51983409,51974234,51971698,51970184,51969605 Gene ID= ENSG00000114779.19 TPM= 176.74 Transcript Type= protein_coding chr3 51968516 51974630 51968516 51974630 - ENST00000487005.1@ABHD14B ENST00000487005.1 protein_coding 51973965,51969943,51968516 51974630,51970184,51969605 Gene ID= ENSG00000114779.19 TPM= 26.41 Transcript Type= processed_transcript chr3 51968530 51974031 51968530 51974031 - ENST00000395008.6@ABHD14B ENST00000395008.6 protein_coding 51973965,51971460,51969943,51968530 51974031,51971892,51970184,51969605 Gene ID= ENSG00000114779.19 TPM= 8.76 Transcript Type= protein_coding chr3 51973622 51981194 51973622 51981194 + transcript2113.chr3.nic@ABHD14A transcript2113.chr3.nic protein_coding 51973622,51977871,51978259,51980393,51980836 51973905,51978082,51978374,51980628,51981194 Gene ID= ENSG00000248487.8 TPM= 29.28 Transcript Type= NA chr3 51975068 51981196 51975068 51981196 + ENST00000273596.7@ABHD14A ENST00000273596.7 protein_coding 51975068,51977871,51978259,51980393,51980836 51975204,51978082,51978374,51980628,51981196 Gene ID= ENSG00000248487.8 TPM= 31.09 Transcript Type= protein_coding chr3 51983278 51989202 51983278 51989202 + ENST00000636358.1@ACY1 ENST00000636358.1 protein_coding 51983278,51984047,51985207,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911 51983589,51984158,51985271,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989202 Gene ID= ENSG00000243989.8 TPM= 93.57 Transcript Type= protein_coding chr3 51983435 51989197 51983435 51989197 + ENST00000636880.1@ACY1 ENST00000636880.1 protein_coding 51983435,51984047,51985361,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911 51983589,51984158,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989197 Gene ID= ENSG00000243989.8 TPM= 3.92 Transcript Type= nonsense_mediated_decay chr3 51983443 51989197 51983443 51989197 + ENST00000476351.5@ACY1 ENST00000476351.5 protein_coding 51983443,51984047,51985401,51985852,51986255,51986415,51986605,51986988,51987147,51987309,51987556,51988524,51988766,51988911 51983589,51984158,51985465,51985946,51986331,51986504,51986661,51987061,51987196,51987453,51987624,51988603,51988826,51989197 Gene ID= ENSG00000243989.8 TPM= 1.81 Transcript Type= protein_coding chr3 51993600 51995942 51993600 51995942 - ENST00000294189.10@RPL29 ENST00000294189.10 protein_coding 51995857,51995425,51995042,51993600 51995942,51995469,51995106,51994126 Gene ID= ENSG00000162244.10 TPM= 442.81 Transcript Type= protein_coding chr3 51993629 51995830 51993629 51995830 - ENST00000479017.5@RPL29 ENST00000479017.5 protein_coding 51995769,51995425,51995042,51993629 51995830,51995469,51995106,51994126 Gene ID= ENSG00000162244.10 TPM= 15.39 Transcript Type= protein_coding chr3 52048919 52056550 52048919 52056550 - ENST00000495880.1@DUSP7 ENST00000495880.1 protein_coding 52055850,52053940,52048919 52056550,52054374,52051122 Gene ID= ENSG00000164086.9 TPM= 22.64 Transcript Type= protein_coding chr3 52075286 52154690 52075286 52154690 - ENST00000394970.6@POC1A ENST00000394970.6 protein_coding 52154355,52151016,52149816,52149210,52146988,52145846,52138169,52125113,52122379,52075286 52154690,52151100,52149987,52149389,52147095,52145961,52138302,52125181,52122477,52075985 Gene ID= ENSG00000164087.7 TPM= 1.81 Transcript Type= protein_coding chr3 52198132 52214324 52198132 52214324 + ENST00000310271.6@ALAS1 ENST00000310271.6 protein_coding 52198132,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020 52198255,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214324 Gene ID= ENSG00000023330.14 TPM= 1420.93 Transcript Type= protein_coding chr3 52198094 52214327 52198094 52214327 + ENST00000394965.6@ALAS1 ENST00000394965.6 protein_coding 52198094,52198672,52199221,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020 52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214327 Gene ID= ENSG00000023330.14 TPM= 26.39 Transcript Type= protein_coding chr3 52198144 52214292 52198144 52214292 + ENST00000484952.5@ALAS1 ENST00000484952.5 protein_coding 52198144,52198672,52199210,52202507,52203863,52204693,52205839,52206572,52208083,52211283,52212258,52214020 52198255,52198848,52199440,52202734,52204012,52204915,52206023,52206751,52208247,52211551,52212420,52214292 Gene ID= ENSG00000023330.14 TPM= 171.78 Transcript Type= protein_coding chr3 52228610 52239260 52228610 52239260 - ENST00000305533.9@TWF2 ENST00000305533.9 protein_coding 52238992,52235029,52231944,52231444,52231127,52230870,52229920,52229661,52228610 52239260,52235106,52232122,52231539,52231231,52230995,52230070,52229782,52229201 Gene ID= ENSG00000247596.8 TPM= 111.38 Transcript Type= protein_coding chr3 52245793 52250595 52245793 52250595 + ENST00000323588.8@PPM1M ENST00000323588.8 protein_coding 52245793,52246695,52246974,52247682,52248153,52248335,52248637,52248956,52249174,52249670 52246048,52246812,52247228,52247794,52248237,52248453,52248700,52249063,52249322,52250595 Gene ID= ENSG00000164088.17 TPM= 19.92 Transcript Type= protein_coding chr3 52254407 52278668 52254407 52278668 - transcript2215.chr3.nnic@WDR82 transcript2215.chr3.nnic protein_coding 52278201,52266952,52261380,52260385,52259717,52259197,52258536,52254407 52278668,52267018,52261479,52260501,52259872,52259266,52258678,52257519 Gene ID= ENSG00000164091.11 TPM= 3.62 Transcript Type= NA chr3 52254421 52278643 52254421 52278643 - ENST00000296490.7@WDR82 ENST00000296490.7 protein_coding 52278201,52270712,52266952,52261380,52260385,52259717,52259197,52258536,52254421 52278643,52270809,52267018,52261479,52260501,52259872,52259266,52258678,52257519 Gene ID= ENSG00000164091.11 TPM= 42.56 Transcript Type= protein_coding chr3 52287806 52293476 52287806 52293476 + transcript2217.chr3.nic@GLYCTK transcript2217.chr3.nic protein_coding 52287806,52290304,52290960,52291747,52292260,52293046,52293307 52287876,52290719,52291111,52291922,52292569,52293192,52293476 Gene ID= ENSG00000168237.17 TPM= 5.43 Transcript Type= NA chr3 52287805 52293480 52287805 52293480 + transcript2223.chr3.nic@GLYCTK transcript2223.chr3.nic protein_coding 52287805,52290960,52291747,52292260 52287876,52291111,52291922,52293480 Gene ID= ENSG00000168237.17 TPM= 1.81 Transcript Type= NA chr3 52287806 52295255 52287806 52295255 + transcript2226.chr3.nic@GLYCTK transcript2226.chr3.nic protein_coding 52287806,52290304,52290960,52292260 52287876,52290719,52291922,52295255 Gene ID= ENSG00000168237.17 TPM= 3.62 Transcript Type= NA chr3 52287835 52293471 52287835 52293471 + ENST00000471180.5@GLYCTK ENST00000471180.5 protein_coding 52287835,52290960,52291747,52292260,52293046,52293307 52287876,52291111,52291922,52292569,52293192,52293471 Gene ID= ENSG00000168237.17 TPM= 3.62 Transcript Type= protein_coding chr3 52287820 52293475 52287820 52293475 + ENST00000486393.5@GLYCTK ENST00000486393.5 protein_coding 52287820,52290304,52290960,52291745,52292260 52287876,52290719,52291111,52291922,52293475 Gene ID= ENSG00000168237.17 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr3 52287856 52293476 52287856 52293476 + ENST00000436784.6@GLYCTK ENST00000436784.6 protein_coding 52287856,52290304,52290960,52291747,52292260 52287876,52290719,52291111,52291922,52293476 Gene ID= ENSG00000168237.17 TPM= 3.62 Transcript Type= protein_coding chr3 52401013 52410350 52401013 52410350 - ENST00000460680.5@BAP1 ENST00000460680.5 protein_coding 52409842,52409714,52409554,52408474,52407958,52407399,52407174,52406829,52406253,52405765,52405110,52404453,52403416,52403138,52402779,52402602,52401013 52410350,52409743,52409608,52408606,52408077,52407460,52407316,52406907,52406376,52405912,52405294,52404586,52403894,52403298,52402871,52402674,52402421 Gene ID= ENSG00000163930.9 TPM= 120.44 Transcript Type= protein_coding chr3 52451102 52454070 52451102 52454070 - ENST00000232975.7@TNNC1 ENST00000232975.7 protein_coding 52453992,52452483,52452106,52451744,52451391,52451102 52454070,52452513,52452252,52451858,52451527,52451306 Gene ID= ENSG00000114854.7 TPM= 3.62 Transcript Type= protein_coding chr3 52480061 52493078 52480061 52493078 + transcript2251.chr3.nic@NISCH transcript2251.chr3.nic protein_coding 52480061,52484513,52485778,52487196,52489336,52490075,52490705,52491352,52491872 52480295,52484637,52485827,52488605,52489678,52490231,52490833,52491513,52493078 Gene ID= ENSG00000010322.15 TPM= 37.43 Transcript Type= NA chr3 52455508 52493071 52455508 52493071 + ENST00000345716.8@NISCH ENST00000345716.8 protein_coding 52455508,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52484513,52485778,52487196,52489336,52490075,52490705,52491352,52491872 52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52484637,52485827,52488605,52489678,52490231,52490833,52491513,52493071 Gene ID= ENSG00000010322.15 TPM= 69.12 Transcript Type= protein_coding chr3 52455617 52481914 52455617 52481914 + ENST00000420808.2@NISCH ENST00000420808.2 protein_coding 52455617,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184,52480879 52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52480295,52481914 Gene ID= ENSG00000010322.15 TPM= 45.73 Transcript Type= protein_coding chr3 52455617 52481910 52455617 52481910 + ENST00000488380.5@NISCH ENST00000488380.5 protein_coding 52455617,52457843,52458662,52470859,52471814,52472303,52473734,52476447,52477574,52478097,52478449,52479749,52480184 52455734,52457926,52458844,52470907,52471977,52472398,52473829,52476599,52477642,52478282,52478577,52479862,52481910 Gene ID= ENSG00000010322.15 TPM= 7.7 Transcript Type= protein_coding chr3 52495338 52524495 52495338 52524495 + ENST00000321725.10@STAB1 ENST00000321725.10 protein_coding 52495338,52501166,52501638,52502006,52502159,52502632,52502999,52503344,52503772,52504028,52504461,52504739,52505003,52505319,52505668,52505883,52506170,52506692,52507613,52507931,52508273,52509210,52509870,52510142,52510349,52511650,52512341,52512596,52512828,52513130,52513717,52513883,52514115,52514365,52514701,52514989,52515423,52516043,52516356,52516542,52516692,52516984,52517320,52517550,52517881,52518312,52518536,52518723,52519264,52519505,52519944,52520204,52520400,52520642,52520804,52521361,52521596,52521844,52522037,52522330,52522555,52522775,52523025,52523222,52523427,52523652,52523871,52524100,52524300 52495491,52501302,52501753,52502091,52502228,52502727,52503109,52503540,52503902,52504155,52504549,52504876,52505143,52505381,52505781,52505936,52506250,52506850,52507675,52508026,52508359,52509321,52510056,52510235,52510507,52511745,52512436,52512643,52512958,52513241,52513794,52513981,52514213,52514496,52514829,52515045,52515506,52516238,52516451,52516587,52516768,52517109,52517393,52517624,52518003,52518359,52518613,52518869,52519404,52519564,52520120,52520290,52520549,52520698,52521005,52521510,52521700,52521951,52522230,52522474,52522688,52522940,52523134,52523341,52523576,52523756,52524017,52524213,52524495 Gene ID= ENSG00000010327.10 TPM= 118.17 Transcript Type= protein_coding chr3 52495337 52524497 52495337 52524497 + transcript2259.chr3.nic@STAB1 transcript2259.chr3.nic protein_coding 52495337,52501166,52501638,52502006,52502159,52502632,52502999,52503344,52503772,52504028,52504461,52504739,52505003,52505319,52505668,52505883,52506170,52506692,52507613,52507931,52508273,52509210,52509870,52510142,52510349,52511650,52512341,52512596,52512828,52513130,52513717,52513883,52514115,52514365,52514701,52514989,52515423,52516043,52516356,52516542,52516692,52517320,52517550,52517881,52518312,52518536,52518723,52519264,52519505,52519944,52520204,52520400,52520642,52520804,52521361,52521596,52521844,52522037,52522330,52522555,52522775,52523025,52523222,52523427,52523652,52523871,52524100,52524300 52495491,52501302,52501753,52502091,52502228,52502727,52503109,52503540,52503902,52504155,52504549,52504876,52505143,52505381,52505781,52505936,52506250,52506850,52507675,52508026,52508359,52509321,52510056,52510235,52510507,52511745,52512436,52512643,52512958,52513241,52513794,52513981,52514213,52514496,52514829,52515045,52515506,52516238,52516451,52516587,52517109,52517393,52517624,52518003,52518359,52518613,52518869,52519404,52519564,52520120,52520290,52520549,52520698,52521005,52521510,52521700,52521951,52522230,52522474,52522688,52522940,52523134,52523341,52523576,52523756,52524017,52524213,52524497 Gene ID= ENSG00000010327.10 TPM= 62.94 Transcript Type= NA chr3 52524387 52533809 52524387 52533809 - transcript2288.chr3.nic@NT5DC2 transcript2288.chr3.nic protein_coding 52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524387 52533809,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524611 Gene ID= ENSG00000168268.10 TPM= 8.38 Transcript Type= NA chr3 52524370 52533810 52524370 52533810 - transcript2290.chr3.nnic@NT5DC2 transcript2290.chr3.nnic protein_coding 52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52524963,52524817,52524370 52533810,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525103,52524881,52524731 Gene ID= ENSG00000168268.10 TPM= 4.75 Transcript Type= NA chr3 52524386 52533777 52524386 52533777 - transcript2291.chr3.nnic@NT5DC2 transcript2291.chr3.nnic protein_coding 52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524386 52533777,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524611 Gene ID= ENSG00000168268.10 TPM= 3.85 Transcript Type= NA chr3 52524389 52533777 52524389 52533777 - ENST00000422318.6@NT5DC2 ENST00000422318.6 protein_coding 52533506,52529150,52528861,52528637,52528446,52528183,52528013,52527829,52527617,52527294,52525209,52524963,52524817,52524389 52533777,52529334,52528935,52528692,52528539,52528311,52528073,52527931,52527718,52527375,52525295,52525103,52524881,52524731 Gene ID= ENSG00000168268.10 TPM= 99.84 Transcript Type= protein_coding chr3 52536605 52541891 52536605 52541891 + ENST00000477703.5@SMIM4 ENST00000477703.5 protein_coding 52536605,52540424 52536906,52541891 Gene ID= ENSG00000168273.7 TPM= 36.22 Transcript Type= protein_coding chr3 52534013 52540526 52534013 52540526 + ENST00000491607.5@SMIM4 ENST00000491607.5 protein_coding 52534013,52534803,52540424 52534148,52534877,52540526 Gene ID= ENSG00000168273.7 TPM= 10.87 Transcript Type= processed_transcript chr3 52536602 52540525 52536602 52540525 + ENST00000307106.3@SMIM4 ENST00000307106.3 protein_coding 52536602,52540424 52536773,52540525 Gene ID= ENSG00000168273.7 TPM= 38.94 Transcript Type= protein_coding chr3 52686033 52694492 52686033 52694492 + transcript2299.chr3.nic@GNL3 transcript2299.chr3.nic protein_coding 52686033,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193 52686105,52686827,52687383,52687615,52688206,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694492 Gene ID= ENSG00000163938.16 TPM= 3.92 Transcript Type= NA chr3 52685666 52694492 52685666 52694492 + transcript2300.chr3.nnic@GNL3 transcript2300.chr3.nnic protein_coding 52685666,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193 52686055,52686827,52687383,52687615,52688192,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694492 Gene ID= ENSG00000163938.16 TPM= 3.92 Transcript Type= NA chr3 52686016 52694492 52686016 52694492 + ENST00000394799.6@GNL3 ENST00000394799.6 protein_coding 52686016,52686769,52687246,52687502,52688109,52689074,52690592,52690945,52691542,52692872,52693187,52693408,52693632,52694037,52694193 52686202,52686827,52687383,52687615,52688192,52689206,52690704,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694492 Gene ID= ENSG00000163938.16 TPM= 2.11 Transcript Type= protein_coding chr3 52686049 52694459 52686049 52694459 + ENST00000496254.5@GNL3 ENST00000496254.5 protein_coding 52686049,52686769,52687246,52687502,52688109,52689074,52690592,52691542,52692872,52693187,52693408,52693632,52694037,52694193 52686105,52686827,52687383,52687615,52688192,52689206,52691071,52691629,52693046,52693329,52693544,52693807,52694103,52694459 Gene ID= ENSG00000163938.16 TPM= 2.72 Transcript Type= retained_intron chr3 52692383 52705790 52692383 52705790 - transcript2313.chr3.nnic@GLT8D1 transcript2313.chr3.nnic protein_coding 52705447,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52693602,52692383 52705790,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52693681,52693513 Gene ID= ENSG00000016864.18 TPM= 1.81 Transcript Type= NA chr3 52694492 52705735 52694492 52705735 - transcript2317.chr3.nnic@GLT8D1 transcript2317.chr3.nnic protein_coding 52705447,52703504,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694492 52705735,52703698,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035 Gene ID= ENSG00000016864.18 TPM= 2.04 Transcript Type= NA chr3 52694157 52706036 52694157 52706036 - transcript2319.chr3.nic@GLT8D1 transcript2319.chr3.nic protein_coding 52705447,52704724,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694157 52706036,52704952,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035 Gene ID= ENSG00000016864.18 TPM= 12.9 Transcript Type= NA chr3 52694488 52705786 52694488 52705786 - ENST00000266014.10@GLT8D1 ENST00000266014.10 protein_coding 52705447,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694488 52705786,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035 Gene ID= ENSG00000016864.18 TPM= 40.98 Transcript Type= protein_coding chr3 52694503 52705781 52694503 52705781 - ENST00000491606.5@GLT8D1 ENST00000491606.5 protein_coding 52705699,52700445,52700262,52697721,52696542,52696234,52695928,52695421,52695190,52694503 52705781,52700496,52700360,52697934,52696659,52696318,52696040,52695587,52695302,52695035 Gene ID= ENSG00000016864.18 TPM= 4.53 Transcript Type= protein_coding chr3 52705636 52711146 52705636 52711146 + ENST00000619898.4@SPCS1 ENST00000619898.4 protein_coding 52705636,52706644,52706793,52707687 52706282,52706703,52706879,52711146 Gene ID= ENSG00000114902.13 TPM= 207.37 Transcript Type= protein_coding chr3 52708449 52770949 52708449 52770949 - ENST00000233027.9@NEK4 ENST00000233027.9 protein_coding 52770654,52768338,52766178,52765887,52763470,52760795,52751932,52749692,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52708449 52770949,52768604,52766375,52765994,52763624,52760936,52752336,52749829,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869 Gene ID= ENSG00000114904.12 TPM= 22.19 Transcript Type= protein_coding chr3 52710780 52770939 52710780 52770939 - transcript2334.chr3.nnic@NEK4 transcript2334.chr3.nnic protein_coding 52770654,52768338,52766178,52765887,52763470,52751932,52749692,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52710780 52770939,52768604,52766375,52765994,52763624,52752336,52749829,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869 Gene ID= ENSG00000114904.12 TPM= 3.62 Transcript Type= NA chr3 52710780 52770939 52710780 52770939 - transcript2335.chr3.nic@NEK4 transcript2335.chr3.nic protein_coding 52770654,52768338,52766178,52765887,52763470,52760795,52751932,52746734,52746061,52744239,52743352,52741411,52739429,52737586,52710780 52770939,52768604,52766375,52765994,52763624,52760936,52752336,52746904,52746210,52744305,52743461,52741499,52739634,52737719,52711869 Gene ID= ENSG00000114904.12 TPM= 7.7 Transcript Type= NA chr3 52802152 52808813 52802152 52808813 + transcript2337.chr3.nic@ITIH3 transcript2337.chr3.nic protein_coding 52802152,52802667,52803855,52804726,52805808,52806103,52806293,52806901,52807747,52808110,52808552 52802519,52802806,52804009,52804734,52805840,52806138,52806406,52807105,52807916,52808221,52808813 Gene ID= ENSG00000162267.12 TPM= 7.24 Transcript Type= NA chr3 52812975 52830739 52812975 52830739 - ENST00000266041.8@ITIH4 ENST00000266041.8 protein_coding 52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52819940,52819754,52819393,52818462,52818257,52818052,52816884,52814209,52813975,52812975 52830739,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819990,52819792,52819518,52818536,52818283,52818168,52817058,52814363,52814071,52813490 Gene ID= ENSG00000055955.15 TPM= 19.56 Transcript Type= protein_coding chr3 52813284 52830713 52813284 52830713 - transcript2352.chr3.nic@ITIH4 transcript2352.chr3.nic protein_coding 52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52819754,52819393,52818462,52818052,52816884,52814209,52813975,52813284 52830713,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819990,52819518,52818536,52818283,52817058,52814363,52814071,52813490 Gene ID= ENSG00000055955.15 TPM= 5.07 Transcript Type= NA chr3 52813284 52830713 52813284 52830713 - transcript2359.chr3.nic@ITIH4 transcript2359.chr3.nic protein_coding 52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52819393,52818052,52816884,52814209,52813975,52813284 52830713,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819518,52818536,52817058,52814363,52814071,52813490 Gene ID= ENSG00000055955.15 TPM= 3.26 Transcript Type= NA chr3 52813282 52830672 52813282 52830672 - ENST00000406595.5@ITIH4 ENST00000406595.5 protein_coding 52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52819393,52818462,52818257,52818052,52816884,52814209,52813975,52813282 52830672,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819518,52818536,52818283,52818168,52817058,52814363,52814071,52813490 Gene ID= ENSG00000055955.15 TPM= 29.52 Transcript Type= protein_coding chr3 52813313 52830687 52813313 52830687 - ENST00000491663.5@ITIH4 ENST00000491663.5 protein_coding 52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52819754,52819393,52818462,52818257,52818052,52816884,52814209,52813975,52813313 52830687,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819990,52819518,52818536,52818283,52818168,52817058,52814363,52814071,52813490 Gene ID= ENSG00000055955.15 TPM= 2.72 Transcript Type= retained_intron chr3 52813270 52830673 52813270 52830673 - ENST00000485816.5@ITIH4 ENST00000485816.5 protein_coding 52830553,52829119,52827093,52826791,52826541,52825886,52824842,52824397,52824190,52823823,52823556,52820991,52820631,52820291,52819940,52819754,52819393,52818462,52818257,52818052,52816884,52814209,52813975,52813270 52830673,52829279,52827197,52826953,52826651,52826014,52824958,52824565,52824315,52824004,52823741,52821130,52820785,52820317,52819990,52819807,52819518,52818536,52818283,52818168,52817058,52814363,52814071,52813490 Gene ID= ENSG00000055955.15 TPM= 2.35 Transcript Type= protein_coding chr3 52836742 52897595 52836742 52897595 - transcript2371.chr3.nic@TMEM110 transcript2371.chr3.nic protein_coding 52897291,52895878,52855396,52852603,52849792,52844829,52843721,52842811,52836742 52897595,52895955,52855444,52852698,52849913,52844941,52843798,52842960,52840610 Gene ID= ENSG00000213533.11 TPM= 9.51 Transcript Type= NA chr3 52836756 52897596 52836756 52897596 - ENST00000355083.9@TMEM110 ENST00000355083.9 protein_coding 52897291,52855396,52852603,52849792,52844829,52843721,52842811,52836756 52897596,52855444,52852698,52849913,52844941,52843798,52842960,52840610 Gene ID= ENSG00000213533.11 TPM= 53.88 Transcript Type= protein_coding chr3 53088483 53130462 53088483 53130462 - ENST00000296292.7@RFT1 ENST00000296292.7 protein_coding 53130338,53125909,53123724,53122374,53121699,53119884,53111830,53106819,53105673,53103953,53099381,53092369,53088483 53130462,53125994,53123840,53122563,53121800,53120021,53111908,53106869,53105803,53104097,53099486,53092618,53092070 Gene ID= ENSG00000163933.9 TPM= 38.33 Transcript Type= protein_coding chr3 53091649 53130435 53091649 53130435 - transcript2390.chr3.nnic@RFT1 transcript2390.chr3.nnic protein_coding 53130338,53123724,53122374,53121699,53119884,53111830,53106819,53105673,53103953,53099381,53092369,53091649 53130435,53123840,53122563,53121800,53120021,53111908,53106869,53105803,53104097,53099486,53092618,53092070 Gene ID= ENSG00000163933.9 TPM= 2.11 Transcript Type= NA chr3 53091650 53130464 53091650 53130464 - transcript2391.chr3.nnic@RFT1 transcript2391.chr3.nnic protein_coding 53130338,53125909,53123724,53122374,53121699,53119884,53111830,53105673,53103953,53099381,53092369,53091650 53130464,53125994,53123840,53122563,53121800,53120021,53111908,53105803,53104097,53099486,53092618,53092070 Gene ID= ENSG00000163933.9 TPM= 2.11 Transcript Type= NA chr3 53161209 53192717 53161209 53192717 + transcript2396.chr3.nnic@PRKCD transcript2396.chr3.nnic protein_coding 53161209,53165104,53173493,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108 53161428,53165215,53173608,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717 Gene ID= ENSG00000163932.13 TPM= 12.59 Transcript Type= NA chr3 53161177 53192717 53161177 53192717 + transcript2403.chr3.nnic@PRKCD transcript2403.chr3.nnic protein_coding 53161177,53173493,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108 53161428,53173608,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717 Gene ID= ENSG00000163932.13 TPM= 17.11 Transcript Type= NA chr3 53168704 53192717 53168704 53192717 + transcript2412.chr3.nnic@PRKCD transcript2412.chr3.nnic protein_coding 53168704,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108 53168811,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192717 Gene ID= ENSG00000163932.13 TPM= 14.4 Transcript Type= NA chr3 53161199 53192554 53161199 53192554 + ENST00000330452.7@PRKCD ENST00000330452.7 protein_coding 53161199,53165104,53178404,53179577,53181207,53181444,53181701,53183121,53183452,53184874,53185604,53185927,53186167,53186604,53187340,53188720,53189058,53189873,53192108 53161428,53165215,53178537,53179776,53181267,53181606,53181732,53183206,53183581,53184974,53185700,53186027,53186340,53186695,53187402,53188858,53189246,53190001,53192554 Gene ID= ENSG00000163932.13 TPM= 10.48 Transcript Type= protein_coding chr3 53224714 53256000 53224714 53256000 - ENST00000423525.6@TKT ENST00000423525.6 protein_coding 53255836,53242125,53241132,53240251,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225751,53224714 53256000,53242242,53241245,53240348,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931,53225609 Gene ID= ENSG00000163931.15 TPM= 3.62 Transcript Type= protein_coding chr3 53225657 53256022 53225657 53256022 - ENST00000423516.5@TKT ENST00000423516.5 protein_coding 53255836,53242125,53241132,53240251,53237797,53234983,53233156,53231357,53230457,53229280,53229007,53228276,53228056,53226756,53225657 53256022,53242242,53241245,53240348,53237820,53235174,53233274,53231550,53230621,53229436,53229137,53228359,53228149,53226878,53225931 Gene ID= ENSG00000163931.15 TPM= 7.09 Transcript Type= protein_coding chr3 53283428 53347610 53283428 53347610 - ENST00000610213.5@DCP1A ENST00000610213.5 protein_coding 53347383,53344902,53342144,53319407,53312241,53304177,53292069,53290791,53288065,53283428 53347610,53344942,53342271,53319473,53312379,53304290,53292827,53290856,53288283,53287660 Gene ID= ENSG00000272886.5 TPM= 32.6 Transcript Type= protein_coding chr3 53287370 53347525 53287370 53347525 - ENST00000294241.10@DCP1A ENST00000294241.10 protein_coding 53347383,53344902,53342144,53319407,53312241,53292069,53290791,53288065,53287370 53347525,53344942,53342271,53319473,53312379,53292827,53290856,53288283,53287660 Gene ID= ENSG00000272886.5 TPM= 1.81 Transcript Type= protein_coding chr3 53816300 53846453 53816300 53846453 - transcript2459.chr3.nnic@CHDH transcript2459.chr3.nnic protein_coding 53846083,53840929,53823306,53822491,53821647,53820474,53819532,53819189,53818938,53816300 53846453,53840999,53824067,53822642,53821776,53820608,53819674,53819331,53819040,53818195 Gene ID= ENSG00000016391.10 TPM= 2.04 Transcript Type= NA chr3 53816300 53846453 53816300 53846453 - transcript2467.chr3.nnic@CHDH transcript2467.chr3.nnic protein_coding 53846083,53840929,53823306,53822491,53821647,53820474,53818938,53816300 53846453,53840999,53824067,53822642,53821776,53820608,53819040,53818195 Gene ID= ENSG00000016391.10 TPM= 2.94 Transcript Type= NA chr3 53816300 53846453 53816300 53846453 - transcript2468.chr3.nic@CHDH transcript2468.chr3.nic protein_coding 53846083,53840929,53823306,53822491,53821647,53820474,53818938,53816300 53846453,53840999,53824067,53822642,53821776,53820608,53819674,53818195 Gene ID= ENSG00000016391.10 TPM= 6.57 Transcript Type= NA chr3 53816300 53846453 53816300 53846453 - transcript2470.chr3.nic@CHDH transcript2470.chr3.nic protein_coding 53846083,53840929,53823306,53822491,53821647,53818938,53816300 53846453,53840999,53824067,53822642,53821776,53820608,53818195 Gene ID= ENSG00000016391.10 TPM= 2.04 Transcript Type= NA chr3 53846584 53865588 53846584 53865588 + ENST00000475124.1@IL17RB ENST00000475124.1 protein_coding 53846584,53848664,53849655,53851999,53852871,53855294,53856844,53857616,53860130,53864746 53846648,53848688,53849795,53852126,53852997,53855341,53856986,53858818,53860228,53865588 Gene ID= ENSG00000056736.9 TPM= 1.81 Transcript Type= retained_intron chr3 53863038 53882180 53863038 53882180 - transcript2454.chr3.nnic@ACTR8 transcript2454.chr3.nnic protein_coding 53881979,53879939,53878357,53877647,53877214,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53868674,53863038 53882180,53880109,53878467,53877751,53877387,53876713,53876080,53874364,53873127,53872524,53871496,53870145,53868862,53865019 Gene ID= ENSG00000113812.13 TPM= 1.81 Transcript Type= NA chr3 53867066 53882202 53867066 53882202 - ENST00000335754.7@ACTR8 ENST00000335754.7 protein_coding 53881979,53879939,53878357,53877647,53877214,53876620,53875948,53874211,53873032,53872384,53871232,53869982,53867066 53882202,53880109,53878467,53877751,53877387,53876713,53876080,53874364,53873127,53872524,53871496,53870145,53868862 Gene ID= ENSG00000113812.13 TPM= 20.83 Transcript Type= protein_coding chr3 56557175 56621818 56557175 56621818 + transcript2484.chr3.nnic@CCDC66 transcript2484.chr3.nnic protein_coding 56557175,56558846,56559569,56563684,56566594,56566950,56571181,56592970,56593491,56593944,56613589,56615128,56615904,56617112,56618172,56619271,56619777,56621532 56557253,56558910,56559594,56564125,56566759,56567053,56571302,56593101,56593741,56594028,56613750,56615272,56616053,56617605,56618212,56619527,56619901,56621818 Gene ID= ENSG00000180376.16 TPM= 1.81 Transcript Type= NA chr3 56557173 56621797 56557173 56621797 + ENST00000394672.7@CCDC66 ENST00000394672.7 protein_coding 56557173,56558846,56559569,56563684,56566594,56566950,56571181,56592970,56593491,56593944,56613589,56615128,56615922,56617112,56618172,56619271,56619777,56621532 56557253,56558910,56559594,56564125,56566759,56567053,56571302,56593101,56593741,56594028,56613750,56615272,56616053,56617605,56618212,56619527,56619901,56621797 Gene ID= ENSG00000180376.16 TPM= 3.62 Transcript Type= protein_coding chr3 56622860 56683305 56622860 56683305 - transcript2492.chr3.nic@FAM208A transcript2492.chr3.nic protein_coding 56682676,56673580,56671600,56670073,56669700,56668397,56666260,56663541,56662385,56660914,56660731,56648985,56648822,56646522,56641349,56639986,56638706,56633044,56628492,56627582,56627037,56624828,56624479,56622860 56683305,56673725,56671692,56670145,56669791,56668558,56666384,56663572,56662490,56661017,56660834,56649057,56648893,56647223,56641752,56640130,56638765,56633843,56628614,56627741,56627145,56625006,56624643,56623843 Gene ID= ENSG00000163946.13 TPM= 3.62 Transcript Type= NA chr3 56727417 57079534 56727417 57079534 - transcript2496.chr3.nic@ARHGEF3 transcript2496.chr3.nic protein_coding 57079226,57076746,57035088,56958823,56882292,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727417 57079534,57076892,57035176,56958889,56882354,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622 Gene ID= ENSG00000163947.11 TPM= 8.05 Transcript Type= NA chr3 56727418 56801967 56727418 56801967 - ENST00000296315.7@ARHGEF3 ENST00000296315.7 protein_coding 56801703,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418 56801967,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622 Gene ID= ENSG00000163947.11 TPM= 70.53 Transcript Type= protein_coding chr3 56727418 56801967 56727418 56801967 - transcript2510.chr3.nnic@ARHGEF3 transcript2510.chr3.nnic protein_coding 56801703,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732287,56727418 56801967,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622 Gene ID= ENSG00000163947.11 TPM= 3.88 Transcript Type= NA chr3 56727418 57079308 56727418 57079308 - ENST00000338458.8@ARHGEF3 ENST00000338458.8 protein_coding 57079226,57035088,56958823,56882292,56773709,56754981,56753504,56751300,56751056,56745205,56737185,56732238,56727418 57079308,57035176,56958889,56882354,56773816,56755151,56753566,56751396,56751132,56745462,56737355,56732424,56729622 Gene ID= ENSG00000163947.11 TPM= 16.2 Transcript Type= protein_coding chr3 57197924 57227646 57197924 57227646 - transcript2512.chr3.nic@HESX1 transcript2512.chr3.nic protein_coding 57226296,57199762,57198753,57198391,57197924 57227646,57200028,57198952,57198492,57198295 Gene ID= ENSG00000163666.8 TPM= 1.81 Transcript Type= NA chr3 57227737 57273468 57227737 57273468 + ENST00000288266.7@APPL1 ENST00000288266.7 protein_coding 57227737,57235566,57237492,57238045,57240465,57242101,57242856,57246076,57247395,57248193,57249360,57252269,57253682,57256957,57257246,57259028,57259845,57260117,57260628,57267742,57268398,57269541 57227937,57235664,57237551,57238116,57240552,57242142,57242914,57246222,57247477,57248351,57249548,57252311,57253738,57257051,57257428,57259080,57260019,57260153,57260774,57267792,57268487,57273468 Gene ID= ENSG00000157500.10 TPM= 17.21 Transcript Type= protein_coding chr3 57571363 57597408 57571363 57597408 - ENST00000303436.10@ARF4 ENST00000303436.10 protein_coding 57597074,57584384,57583898,57577316,57575548,57571363 57597408,57584464,57584007,57577387,57575673,57572298 Gene ID= ENSG00000168374.10 TPM= 153.04 Transcript Type= protein_coding chr3 57756262 57930001 57756262 57930001 + transcript2524.chr3.nic@SLMAP transcript2524.chr3.nic protein_coding 57756262,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57865242,57871636,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296 57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57865292,57871698,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57930001 Gene ID= ENSG00000163681.14 TPM= 7.59 Transcript Type= NA chr3 57756309 57929167 57756309 57929167 + transcript2525.chr3.nic@SLMAP transcript2525.chr3.nic protein_coding 57756309,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57865242,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296 57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57865292,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929167 Gene ID= ENSG00000163681.14 TPM= 3.06 Transcript Type= NA chr3 57756262 57930001 57756262 57930001 + transcript2526.chr3.nic@SLMAP transcript2526.chr3.nic protein_coding 57756262,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57871636,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296 57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57871698,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57930001 Gene ID= ENSG00000163681.14 TPM= 19.36 Transcript Type= NA chr3 57756261 57929877 57756261 57929877 + transcript2530.chr3.nnic@SLMAP transcript2530.chr3.nnic protein_coding 57756261,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57864807,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296 57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57864857,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929877 Gene ID= ENSG00000163681.14 TPM= 14.83 Transcript Type= NA chr3 57756281 57929167 57756281 57929167 + transcript2531.chr3.nic@SLMAP transcript2531.chr3.nic protein_coding 57756281,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57871636,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296 57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57871698,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57929167 Gene ID= ENSG00000163681.14 TPM= 3.97 Transcript Type= NA chr3 57756275 57930001 57756275 57930001 + transcript2534.chr3.nic@SLMAP transcript2534.chr3.nic protein_coding 57756275,57756548,57831383,57841299,57847197,57849754,57857733,57858088,57860699,57861949,57864548,57890041,57896511,57896873,57907884,57909076,57912381,57913158,57916906,57922889,57925845,57927296 57756342,57757849,57831530,57841371,57847233,57849816,57857828,57858159,57860839,57862086,57864716,57890100,57896591,57896932,57908006,57909150,57912701,57913275,57917077,57923023,57925934,57930001 Gene ID= ENSG00000163681.14 TPM= 26.6 Transcript Type= NA chr3 58008365 58172254 58008365 58172254 + transcript2546.chr3.nnic@FLNB transcript2546.chr3.nnic protein_coding 58008365,58077046,58078717,58081629,58094836,58096141,58097815,58098711,58102203,58103959,58105080,58168440,58169590,58170575 58008856,58077294,58078814,58081776,58094954,58096218,58097977,58098908,58102340,58104085,58105216,58168658,58169793,58172254 Gene ID= ENSG00000136068.14 TPM= 3.62 Transcript Type= NA chr3 58008400 58172251 58008400 58172251 + ENST00000295956.8@FLNB ENST00000295956.8 protein_coding 58008400,58077046,58078717,58081629,58094836,58096141,58097815,58098711,58102203,58103959,58105080,58106680,58108458,58109179,58109576,58110010,58111791,58112149,58118872,58121241,58123093,58124332,58125581,58126602,58130741,58132808,58134616,58135979,58138282,58141858,58142650,58143473,58145921,58146820,58148206,58148649,58149850,58150105,58153375,58154791,58155960,58159554,58163154,58168440,58169590,58170575 58008856,58077294,58078814,58081776,58094954,58096218,58097977,58098908,58102340,58104085,58105216,58106873,58108571,58109322,58109699,58110170,58111881,58112318,58118989,58121503,58123690,58124505,58125743,58126762,58130908,58132931,58134772,58136168,58138529,58141929,58142752,58143613,58146049,58146993,58148364,58148852,58150002,58150227,58153641,58154928,58156075,58159686,58163330,58168658,58169793,58172251 Gene ID= ENSG00000136068.14 TPM= 17.05 Transcript Type= protein_coding chr3 58008400 58172251 58008400 58172251 + ENST00000358537.7@FLNB ENST00000358537.7 protein_coding 58008400,58077046,58078717,58081629,58094836,58096141,58097815,58098711,58102203,58103959,58105080,58106680,58108458,58109179,58109576,58110010,58111791,58112149,58118872,58121241,58123093,58124332,58125581,58126602,58130741,58132808,58134616,58135979,58138282,58142650,58143473,58145921,58146820,58148206,58148649,58149850,58150105,58153375,58154791,58155960,58159554,58163154,58168440,58169590,58170575 58008856,58077294,58078814,58081776,58094954,58096218,58097977,58098908,58102340,58104085,58105216,58106873,58108571,58109322,58109699,58110170,58111881,58112318,58118989,58121503,58123690,58124505,58125743,58126762,58130908,58132931,58134772,58136168,58138529,58142752,58143613,58146049,58146993,58148364,58148852,58150002,58150227,58153641,58154928,58156075,58159686,58163330,58168658,58169793,58172251 Gene ID= ENSG00000136068.14 TPM= 16.6 Transcript Type= protein_coding chr3 58008400 58170774 58008400 58170774 + ENST00000490882.5@FLNB ENST00000490882.5 protein_coding 58008400,58077046,58078717,58081629,58094836,58096141,58097815,58098711,58102203,58103959,58105080,58106680,58108458,58109179,58109576,58110010,58111791,58112149,58118872,58121241,58123093,58124332,58125581,58126602,58130741,58131927,58132808,58134616,58135979,58138282,58141858,58142650,58143473,58145921,58146820,58148206,58148649,58149850,58150105,58153375,58154791,58155960,58159554,58163154,58168440,58169590,58170575 58008856,58077294,58078814,58081776,58094954,58096218,58097977,58098908,58102340,58104085,58105216,58106873,58108571,58109322,58109699,58110170,58111881,58112318,58118989,58121503,58123690,58124505,58125743,58126762,58130908,58132019,58132931,58134772,58136168,58138529,58141929,58142752,58143613,58146049,58146993,58148364,58148852,58150002,58150227,58153641,58154928,58156075,58159686,58163330,58168658,58169793,58170774 Gene ID= ENSG00000136068.14 TPM= 1.66 Transcript Type= protein_coding chr3 58192628 58211223 58192628 58211223 - ENST00000394549.6@DNASE1L3 ENST00000394549.6 protein_coding 58210766,58208218,58205471,58204769,58200997,58197821,58193343,58192628 58211223,58208306,58205560,58204881,58201109,58197978,58193439,58192803 Gene ID= ENSG00000163687.13 TPM= 51.62 Transcript Type= protein_coding chr3 58237506 58294732 58237506 58294732 + ENST00000478253.5@ABHD6 ENST00000478253.5 protein_coding 58237506,58249878,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589 58237916,58249942,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294732 Gene ID= ENSG00000163686.14 TPM= 45.73 Transcript Type= protein_coding chr3 58237532 58294734 58237532 58294734 + ENST00000295962.8@ABHD6 ENST00000295962.8 protein_coding 58237532,58256562,58267189,58269321,58270932,58274658,58285085,58285353,58293589 58237916,58256705,58267345,58269434,58271064,58274815,58285139,58285453,58294734 Gene ID= ENSG00000163686.14 TPM= 46.64 Transcript Type= protein_coding chr3 58306262 58324695 58306262 58324695 + ENST00000445193.7@RPP14 ENST00000445193.7 protein_coding 58306262,58310309,58310507,58316515,58316915,58317440 58306651,58310406,58310591,58316591,58316993,58324695 Gene ID= ENSG00000163684.11 TPM= 11.77 Transcript Type= protein_coding chr3 58306275 58320078 58306275 58320078 + ENST00000295959.9@RPP14 ENST00000295959.9 protein_coding 58306275,58310309,58310507,58316515,58316915,58317440 58306417,58310406,58310591,58316591,58316993,58320078 Gene ID= ENSG00000163684.11 TPM= 14.49 Transcript Type= protein_coding chr3 58332880 58425151 58332880 58425151 + ENST00000356151.6@PXK ENST00000356151.6 protein_coding 58332880,58365874,58369431,58382514,58390582,58391147,58391773,58394998,58395658,58397039,58397605,58399299,58403862,58408924,58409532,58410090,58412901,58424752 58333090,58365924,58369478,58382700,58390659,58391220,58391847,58395102,58395759,58397200,58397722,58399377,58403910,58409001,58409618,58410159,58412963,58425151 Gene ID= ENSG00000168297.15 TPM= 1.81 Transcript Type= protein_coding chr3 58427630 58433852 58427630 58433852 - ENST00000302746.10@PDHB ENST00000302746.10 protein_coding 58433768,58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427630 58433852,58433684,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179 Gene ID= ENSG00000168291.12 TPM= 219.59 Transcript Type= protein_coding chr3 58427692 58433839 58427692 58433839 - ENST00000461692.5@PDHB ENST00000461692.5 protein_coding 58433631,58431877,58431731,58431593,58430657,58430128,58429708,58428473,58427692 58433839,58431984,58431793,58431628,58430942,58430238,58429799,58428614,58428179 Gene ID= ENSG00000168291.12 TPM= 4.07 Transcript Type= retained_intron chr3 58492119 58502327 58492119 58502327 + ENST00000490264.1@KCTD6 ENST00000490264.1 protein_coding 58492119,58494153,58498713,58500946 58492169,58494408,58498782,58502327 Gene ID= ENSG00000168301.12 TPM= 2.26 Transcript Type= protein_coding chr3 58492114 58502352 58492114 58502352 + ENST00000404589.7@KCTD6 ENST00000404589.7 protein_coding 58492114,58498713,58500946 58492169,58498782,58502352 Gene ID= ENSG00000168301.12 TPM= 23.09 Transcript Type= protein_coding chr3 58564117 58577764 58564117 58577764 - ENST00000360997.6@FAM107A ENST00000360997.6 protein_coding 58577309,58569691,58567208,58564117 58577764,58569865,58567364,58566695 Gene ID= ENSG00000168309.16 TPM= 8.15 Transcript Type= protein_coding chr3 58742000 59050084 58742000 59050084 - transcript2602.chr3.nic@C3orf67 transcript2602.chr3.nic protein_coding 59049611,59047165,59046229,59039557,58937648,58884545,58870173,58869328,58867817,58866566,58863558,58849032,58831686,58806395,58753769,58742000 59050084,59047254,59046322,59039629,58937762,58884709,58870309,58869490,58867936,58866688,58863892,58849409,58831889,58806456,58753863,58742572 Gene ID= ENSG00000163689.19 TPM= 1.81 Transcript Type= NA chr3 59747278 60014266 59747278 60014266 - transcript2607.chr3.nic@FHIT transcript2607.chr3.nic protein_coding 60014007,60011371,59922346,59752221,59747278 60014266,60011400,59922414,59752321,59749579 Gene ID= ENSG00000189283.9 TPM= 9.06 Transcript Type= NA chr3 61561911 62297613 61561911 62297613 + ENST00000474889.5@PTPRG ENST00000474889.5 protein_coding 61561911,61748878,61989625,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62231225,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161 61562372,61748982,61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62231311,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62297613 Gene ID= ENSG00000144724.19 TPM= 5.43 Transcript Type= protein_coding chr3 61989624 62297608 61989624 62297608 + transcript2613.chr3.nic@PTPRG transcript2613.chr3.nic protein_coding 61989624,62003349,62078163,62132602,62157067,62167971,62191469,62195062,62201505,62203173,62218851,62243807,62255124,62262798,62267410,62267685,62269035,62271383,62272946,62273698,62275873,62276972,62277551,62281563,62282727,62292421,62293161 61989804,62003497,62078258,62132668,62157224,62168163,62191653,62195170,62201554,62203950,62218983,62243898,62255215,62262894,62267492,62267819,62269169,62271555,62273081,62273844,62275966,62277048,62277679,62281709,62282869,62292556,62297608 Gene ID= ENSG00000144724.19 TPM= 18.11 Transcript Type= NA chr3 62319721 62333646 62319721 62333646 + ENST00000542214.2@C3orf14 ENST00000542214.2 protein_coding 62319721,62320460,62321930,62331325,62333255 62319832,62320524,62322053,62331399,62333646 Gene ID= ENSG00000114405.10 TPM= 1.81 Transcript Type= protein_coding chr3 63832834 63864275 63832834 63864275 - transcript2622.chr3.nnic@THOC7 transcript2622.chr3.nnic protein_coding 63864200,63863772,63839656,63838372,63837976,63836301,63835324,63835154,63832834 63864275,63863810,63839773,63838499,63838062,63836358,63835390,63835223,63834199 Gene ID= ENSG00000163634.11 TPM= 2.94 Transcript Type= NA chr3 63833871 63863781 63833871 63863781 - transcript2624.chr3.nic@THOC7 transcript2624.chr3.nic protein_coding 63863504,63839656,63838372,63837976,63836301,63835324,63835154,63833871 63863781,63839773,63838499,63838062,63836358,63835390,63835223,63834199 Gene ID= ENSG00000163634.11 TPM= 2.94 Transcript Type= NA chr3 63833870 63863903 63833870 63863903 - ENST00000295899.9@THOC7 ENST00000295899.9 protein_coding 63863772,63839656,63838372,63837976,63836301,63835324,63835154,63833870 63863903,63839773,63838499,63838062,63836358,63835390,63835223,63834199 Gene ID= ENSG00000163634.11 TPM= 32.83 Transcript Type= protein_coding chr3 63833871 63863868 63833871 63863868 - ENST00000469584.5@THOC7 ENST00000469584.5 protein_coding 63863772,63838372,63837976,63836301,63835324,63835154,63833871 63863868,63838499,63838062,63836358,63835390,63835223,63834199 Gene ID= ENSG00000163634.11 TPM= 3.85 Transcript Type= protein_coding chr3 64010549 64023560 64010549 64023560 - ENST00000295901.8@PSMD6 ENST00000295901.8 protein_coding 64023275,64022318,64019296,64018818,64018599,64013439,64010878,64010549 64023560,64022523,64019441,64019037,64018707,64013607,64010955,64010764 Gene ID= ENSG00000163636.10 TPM= 117.11 Transcript Type= protein_coding chr3 64010555 64023472 64010555 64023472 - ENST00000492933.5@PSMD6 ENST00000492933.5 protein_coding 64023275,64022643,64022318,64019296,64018818,64018599,64013439,64010878,64010555 64023472,64022801,64022523,64019441,64019037,64018707,64013607,64010955,64010764 Gene ID= ENSG00000163636.10 TPM= 4.83 Transcript Type= protein_coding chr3 64010555 64023437 64010555 64023437 - ENST00000476464.5@PSMD6 ENST00000476464.5 protein_coding 64022318,64019296,64018818,64018599,64013439,64010878,64010555 64023437,64019441,64019037,64018707,64013607,64010955,64010764 Gene ID= ENSG00000163636.10 TPM= 1.2 Transcript Type= retained_intron chr3 64685101 64869283 64685101 64869283 + transcript2641.chr3.nnic@ADAMTS9-AS2 transcript2641.chr3.nnic antisense_RNA 64685101,64799465,64809795,64867168 64685338,64799745,64809897,64869283 Gene ID= ENSG00000241684.5 TPM= 1.81 Transcript Type= NA chr3 65353527 65622090 65353527 65622090 - transcript2646.chr3.nic@MAGI1 transcript2646.chr3.nic protein_coding 65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65375745,65364853,65364665,65363465,65361199,65353527 65622090,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65375948,65364946,65364725,65363608,65361337,65357132 Gene ID= ENSG00000151276.23 TPM= 4.53 Transcript Type= NA chr3 65353527 65622090 65353527 65622090 - transcript2648.chr3.nic@MAGI1 transcript2648.chr3.nic protein_coding 65621972,65493512,65478592,65470283,65453258,65448022,65442792,65439879,65437155,65430699,65429520,65401439,65391142,65383532,65381877,65379261,65364853,65364665,65363465,65361199,65353527 65622090,65493631,65478798,65470484,65453340,65448057,65442849,65440012,65437247,65430881,65430140,65401470,65391358,65383623,65382069,65379554,65364946,65364725,65363608,65361337,65357132 Gene ID= ENSG00000151276.23 TPM= 6.34 Transcript Type= NA chr3 66220732 66380020 66220732 66380020 + transcript2653.chr3.nic@SLC25A26 transcript2653.chr3.nic protein_coding 66220732,66236544,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690 66221127,66236700,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66380020 Gene ID= ENSG00000144741.17 TPM= 19.02 Transcript Type= NA chr3 66221012 66378079 66221012 66378079 + ENST00000336733.10@SLC25A26 ENST00000336733.10 protein_coding 66221012,66243203,66262051,66263332,66346364,66362860,66369478,66370529,66377690 66221127,66243312,66262155,66263379,66346408,66362929,66369542,66370602,66378079 Gene ID= ENSG00000144741.17 TPM= 2.72 Transcript Type= protein_coding chr3 66378797 66500932 66378797 66500932 - ENST00000273261.7@LRIG1 ENST00000273261.7 protein_coding 66500190,66462438,66451559,66417129,66414920,66412871,66410129,66407348,66405198,66398970,66398112,66394040,66385981,66383991,66382982,66382273,66381479,66380577,66378797 66500932,66462509,66451633,66417266,66415063,66413014,66410272,66407491,66405278,66399041,66398183,66394203,66386301,66384272,66383401,66382398,66381631,66380861,66380489 Gene ID= ENSG00000144749.13 TPM= 4.53 Transcript Type= protein_coding chr3 67374719 67654614 67374719 67654614 - ENST00000307227.9@SUCLG2 ENST00000307227.9 protein_coding 67654503,67609455,67529087,67528132,67520482,67518247,67508807,67498134,67495798,67400731,67374719 67654614,67609596,67529186,67528222,67520634,67518336,67508903,67498295,67495940,67400851,67375859 Gene ID= ENSG00000172340.14 TPM= 154.85 Transcript Type= protein_coding chr3 68730936 68932610 68730936 68932610 - transcript2673.chr3.nic@FAM19A4 transcript2673.chr3.nic protein_coding 68932322,68885175,68880730,68752863,68739075,68730936 68932610,68885310,68880845,68753018,68739199,68733153 Gene ID= ENSG00000163377.15 TPM= 4.53 Transcript Type= NA chr3 68975215 69013702 68975215 69013702 - transcript2678.chr3.nnic@EOGT transcript2678.chr3.nnic protein_coding 69013574,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68991822,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975215 69013702,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68991872,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764 Gene ID= ENSG00000163378.13 TPM= 2.26 Transcript Type= NA chr3 68975215 69013702 68975215 69013702 - transcript2679.chr3.nic@EOGT transcript2679.chr3.nic protein_coding 69013574,69012368,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975215 69013702,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764 Gene ID= ENSG00000163378.13 TPM= 2.26 Transcript Type= NA chr3 68975215 69013378 68975215 69013378 - transcript2680.chr3.nnic@EOGT transcript2680.chr3.nnic protein_coding 69012991,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975215 69013378,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764 Gene ID= ENSG00000163378.13 TPM= 3.17 Transcript Type= NA chr3 68975214 69013961 68975214 69013961 - ENST00000383701.7@EOGT ENST00000383701.7 protein_coding 69013574,69012515,69011936,69009637,69008428,69007713,69005140,69004378,69001608,68998011,68988925,68988506,68988295,68987445,68982811,68979668,68978333,68975214 69013961,69012799,69011991,69009860,69008528,69007821,69005234,69004482,69001714,68998114,68989017,68988577,68988381,68987513,68982872,68979787,68978435,68977764 Gene ID= ENSG00000163378.13 TPM= 5.89 Transcript Type= protein_coding chr3 69019827 69052303 69019827 69052303 - ENST00000398559.6@TMF1 ENST00000398559.6 protein_coding 69051945,69047358,69044492,69043750,69042807,69039551,69038843,69038564,69035023,69033548,69029815,69028226,69027900,69025996,69025560,69024055,69019827 69052303,69048562,69044595,69043876,69042912,69039693,69039009,69038720,69035115,69033704,69030007,69028295,69027992,69026097,69025712,69024180,69023320 Gene ID= ENSG00000144747.15 TPM= 19.92 Transcript Type= protein_coding chr3 69054730 69080408 69054730 69080408 - ENST00000349511.8@UBA3 ENST00000349511.8 protein_coding 69080334,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730 69080408,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525 Gene ID= ENSG00000144744.16 TPM= 16.75 Transcript Type= protein_coding chr3 69054730 69080408 69054730 69080408 - ENST00000361055.8@UBA3 ENST00000361055.8 protein_coding 69080334,69080112,69077798,69075430,69071535,69067928,69064068,69063439,69062982,69062077,69061814,69057256,69056779,69056612,69056183,69056000,69055851,69054730 69080408,69080153,69077918,69075510,69071617,69068008,69064111,69063503,69063137,69062179,69061927,69057309,69056815,69056693,69056283,69056063,69055905,69055525 Gene ID= ENSG00000144744.16 TPM= 47.54 Transcript Type= protein_coding chr3 69084944 69106066 69084944 69106066 + ENST00000273258.3@ARL6IP5 ENST00000273258.3 protein_coding 69084944,69101839,69104464 69085223,69102056,69106066 Gene ID= ENSG00000144746.6 TPM= 651.09 Transcript Type= protein_coding chr3 69739435 69968336 69739435 69968336 + ENST00000352241.8@MITF ENST00000352241.8 protein_coding 69739435,69879134,69937822,69939098,69941236,69949051,69951830,69956455,69959273,69964847 69739701,69879383,69938049,69939181,69941331,69949168,69951886,69956530,69959420,69968336 Gene ID= ENSG00000187098.14 TPM= 19.92 Transcript Type= protein_coding chr3 70959204 71583753 70959204 71583753 - ENST00000493089.5@FOXP1 ENST00000493089.5 protein_coding 71583571,71581549,71493426,71359150,71299820,71198202,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959204 71583753,71581697,71493555,71359244,71299880,71198392,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977719,70977042,70972676,70970805,70966056,70959391 Gene ID= ENSG00000114861.18 TPM= 1.81 Transcript Type= protein_coding chr3 70959191 71130837 70959191 71130837 - ENST00000491238.5@FOXP1 ENST00000491238.5 protein_coding 71130498,71112536,71053636,71052537,71046942,71041328,71015549,71000972,70987994,70977828,70977643,70976941,70972555,70970736,70965890,70959191 71130837,71112637,71053773,71052626,71047095,71041532,71015653,71001059,70988077,70978029,70977722,70977042,70972676,70970805,70966056,70959391 Gene ID= ENSG00000114861.18 TPM= 1.81 Transcript Type= protein_coding chr3 72749279 72848480 72749279 72848480 - ENST00000325599.12@SHQ1 ENST00000325599.12 protein_coding 72848198,72844359,72842280,72841045,72832369,72824424,72817230,72815350,72812671,72792916,72749279 72848480,72844423,72842402,72841199,72832481,72824551,72817384,72815403,72812794,72793036,72750836 Gene ID= ENSG00000144736.13 TPM= 20.83 Transcript Type= protein_coding chr3 72888073 72976926 72888073 72976926 + ENST00000389617.8@GXYLT2 ENST00000389617.8 protein_coding 72888073,72908367,72922204,72955098,72957229,72967547,72974977 72888508,72908559,72922335,72955349,72957352,72967719,72976926 Gene ID= ENSG00000172986.12 TPM= 9.96 Transcript Type= protein_coding chr3 72996785 73069199 72996785 73069199 + ENST00000356692.9@PPP4R2 ENST00000356692.9 protein_coding 72996785,72998077,73047186,73059037,73061023,73063673,73064003,73064852,73065397 72997071,72998158,73047356,73059130,73061060,73063747,73064146,73065141,73069199 Gene ID= ENSG00000163605.14 TPM= 69.95 Transcript Type= protein_coding chr3 72996792 73069177 72996792 73069177 + transcript2737.chr3.nic@PPP4R2 transcript2737.chr3.nic protein_coding 72996792,72998077,73047186,73059037,73061023,73063673,73064003,73064852 72997071,72998158,73047356,73059130,73061060,73063747,73064146,73069177 Gene ID= ENSG00000163605.14 TPM= 12.45 Transcript Type= NA chr3 72996792 73069200 72996792 73069200 + transcript2740.chr3.nic@PPP4R2 transcript2740.chr3.nic protein_coding 72996792,72998077,73059037,73061023,73063673,73064003,73064852,73065397 72997071,72998158,73059130,73061060,73063747,73064146,73065141,73069200 Gene ID= ENSG00000163605.14 TPM= 4.75 Transcript Type= NA chr3 73382433 73624940 73382433 73624940 - ENST00000263666.8@PDZRN3 ENST00000263666.8 protein_coding 73624103,73608598,73602354,73404148,73400922,73391018,73389816,73387968,73385669,73382433 73624940,73608684,73602461,73404395,73401009,73391116,73389878,73388069,73385785,73384930 Gene ID= ENSG00000121440.14 TPM= 161.19 Transcript Type= protein_coding chr3 75421549 75435125 75421549 75435125 - transcript2752.chr3.nnic@FAM86DP transcript2752.chr3.nnic transcribed_unprocessed_pseudogene 75434918,75432808,75430832,75429136,75426450,75421549 75435125,75432870,75430914,75429237,75426599,75423061 Gene ID= ENSG00000244026.6 TPM= 2.72 Transcript Type= NA chr3 75421376 75435124 75421376 75435124 - transcript2755.chr3.nic@FAM86DP transcript2755.chr3.nic transcribed_unprocessed_pseudogene 75434918,75432808,75430832,75426450,75421376 75435124,75432870,75430914,75426621,75423061 Gene ID= ENSG00000244026.6 TPM= 1.81 Transcript Type= NA chr3 75425311 75435125 75425311 75435125 - transcript2757.chr3.nic@FAM86DP transcript2757.chr3.nic transcribed_unprocessed_pseudogene 75434918,75432808,75430832,75425311 75435125,75432870,75430914,75426599 Gene ID= ENSG00000244026.6 TPM= 1.81 Transcript Type= NA chr3 75729961 75785553 75729961 75785553 - ENST00000477374.5@ZNF717 ENST00000477374.5 protein_coding 75785384,75783306,75741610,75741276,75732060,75729961 75785553,75783364,75741736,75741368,75732121,75730618 Gene ID= ENSG00000227124.8 TPM= 2.72 Transcript Type= protein_coding chr3 78597240 79019459 78597240 79019459 - ENST00000618833.4@ROBO1 ENST00000618833.4 protein_coding 79018407,78938601,78746743,78717763,78717275,78714397,78688648,78685746,78670096,78668484,78668134,78667883,78661993,78661030,78659686,78657098,78651732,78646148,78639744,78635773,78633935,78631161,78627321,78617635,78614648,78606733,78600113,78597240 79019459,78938927,78746900,78717883,78717413,78714524,78688781,78685917,78670301,78668565,78668302,78668049,78662114,78661261,78659807,78657269,78651929,78646190,78639898,78636108,78634042,78631305,78627569,78618041,78614800,78607041,78600309,78598927 Gene ID= ENSG00000169855.19 TPM= 9.96 Transcript Type= protein_coding chr3 81489699 81762161 81489699 81762161 - ENST00000429644.6@GBE1 ENST00000429644.6 protein_coding 81761375,81705444,81670838,81649796,81648856,81646392,81642781,81593908,81591037,81586092,81581165,81577925,81536911,81535195,81499110,81489699 81762161,81705613,81670953,81649921,81648991,81646482,81642990,81594023,81591164,81586190,81581275,81578096,81537095,81535325,81499227,81490463 Gene ID= ENSG00000114480.12 TPM= 277.1 Transcript Type= protein_coding chr3 87227285 87255498 87227285 87255498 + transcript2784.chr3.nic@CHMP2B transcript2784.chr3.nic protein_coding 87227285,87240323,87240699,87245714,87249875,87253404,87253712 87227556,87240453,87240790,87245908,87249977,87253510,87255498 Gene ID= ENSG00000083937.8 TPM= 2.72 Transcript Type= NA chr3 87227285 87255499 87227285 87255499 + ENST00000263780.8@CHMP2B ENST00000263780.8 protein_coding 87227285,87240699,87245714,87249875,87253404,87253712 87227556,87240790,87245908,87249977,87253510,87255499 Gene ID= ENSG00000083937.8 TPM= 69.73 Transcript Type= protein_coding chr3 87227271 87255548 87227271 87255548 + ENST00000471660.5@CHMP2B ENST00000471660.5 protein_coding 87227271,87245714,87249875,87253404,87253712 87227556,87245908,87249977,87253510,87255548 Gene ID= ENSG00000083937.8 TPM= 3.62 Transcript Type= protein_coding chr3 87227302 87254224 87227302 87254224 + ENST00000494980.5@CHMP2B ENST00000494980.5 protein_coding 87227302,87240699,87245714,87249875,87253404,87253712 87227556,87240790,87245818,87249977,87253510,87254224 Gene ID= ENSG00000083937.8 TPM= 1.81 Transcript Type= protein_coding chr3 88051944 88059048 88051944 88059048 - ENST00000309534.10@CGGBP1 ENST00000309534.10 protein_coding 88058815,88058019,88051944 88059048,88058223,88055999 Gene ID= ENSG00000163320.10 TPM= 57.05 Transcript Type= protein_coding chr3 93873112 93973924 93873112 93973924 - transcript2796.chr3.nic@PROS1 transcript2796.chr3.nic protein_coding 93973674,93928702,93927250,93924240,93910619,93906021,93905784,93900804,93898448,93896576,93892933,93886336,93884728,93879163,93876966,93873112 93973924,93928797,93927407,93924264,93910705,93906143,93905915,93900929,93898569,93896691,93893122,93886503,93884896,93879314,93877191,93874405 Gene ID= ENSG00000184500.14 TPM= 6.04 Transcript Type= NA chr3 93873033 93974066 93873033 93974066 - ENST00000394236.7@PROS1 ENST00000394236.7 protein_coding 93973674,93927250,93924240,93910619,93906021,93905784,93900804,93898448,93896576,93892933,93886336,93884728,93879163,93876966,93873033 93974066,93927407,93924264,93910705,93906143,93905915,93900929,93898569,93896691,93893122,93886503,93884896,93879314,93877191,93874405 Gene ID= ENSG00000184500.14 TPM= 42.26 Transcript Type= protein_coding chr3 93873112 93973906 93873112 93973906 - transcript2800.chr3.nnic@PROS1 transcript2800.chr3.nnic protein_coding 93973674,93910619,93906021,93905784,93900804,93898448,93896576,93892933,93886336,93884728,93879163,93876966,93873112 93973906,93910705,93906143,93905915,93900929,93898569,93896691,93893122,93886503,93884896,93879314,93877191,93874405 Gene ID= ENSG00000184500.14 TPM= 3.32 Transcript Type= NA chr3 93980143 94055277 93980143 94055277 + transcript2803.chr3.nic@ARL13B transcript2803.chr3.nic protein_coding 93980143,93988672,93995874,93996563,94003659,94035331,94036552,94039880,94043015,94049406,94050824,94053187 93980482,93988711,93995944,93996684,94003908,94035436,94036754,94039988,94043240,94049522,94050892,94055277 Gene ID= ENSG00000169379.15 TPM= 1.81 Transcript Type= NA chr3 94057922 94062987 94057922 94062987 - ENST00000314636.2@DHFR2 ENST00000314636.2 protein_coding 94062746,94057922 94062987,94061606 Gene ID= ENSG00000178700.7 TPM= 5.43 Transcript Type= protein_coding chr3 94057924 94063223 94057924 94063223 - ENST00000394221.2@DHFR2 ENST00000394221.2 protein_coding 94062869,94057924 94063223,94061606 Gene ID= ENSG00000178700.7 TPM= 4.53 Transcript Type= protein_coding chr3 94062916 94128545 94062916 94128545 + ENST00000314622.8@NSUN3 ENST00000314622.8 protein_coding 94062916,94064437,94084107,94094140,94095033,94126211 94063138,94064546,94084450,94094294,94095154,94128545 Gene ID= ENSG00000178694.9 TPM= 4.53 Transcript Type= protein_coding chr3 97764528 97801242 97764528 97801242 + ENST00000463745.5@ARL6 ENST00000463745.5 protein_coding 97764528,97768081,97780159,97780615,97784955,97787990,97791771,97798024 97764977,97768230,97780220,97780683,97785049,97788119,97791826,97801242 Gene ID= ENSG00000113966.9 TPM= 1.81 Transcript Type= protein_coding chr3 97945335 97972449 97945335 97972449 - transcript2821.chr3.nic@RIOX2 transcript2821.chr3.nic protein_coding 97972381,97967162,97961589,97959051,97954392,97950786,97949844,97947361,97945335 97972449,97967632,97961708,97959179,97954495,97950888,97950015,97947449,97945887 Gene ID= ENSG00000170854.17 TPM= 4.53 Transcript Type= NA chr3 98506474 98522931 98506474 98522931 - transcript2826.chr3.nnic@CLDND1 transcript2826.chr3.nnic protein_coding 98522849,98521133,98518885,98517052,98506474 98522931,98521442,98518995,98517189,98506747 Gene ID= ENSG00000080822.16 TPM= 3.62 Transcript Type= NA chr3 98515473 98523043 98515473 98523043 - ENST00000341181.10@CLDND1 ENST00000341181.10 protein_coding 98522849,98521133,98518885,98517052,98515473 98523043,98521442,98518995,98517189,98516879 Gene ID= ENSG00000080822.16 TPM= 29.88 Transcript Type= protein_coding chr3 98579442 98593723 98579442 98593723 - ENST00000264193.2@CPOX ENST00000264193.2 protein_coding 98592949,98591012,98590632,98588713,98585441,98581407,98579442 98593723,98591155,98590742,98588854,98585659,98581511,98580770 Gene ID= ENSG00000080819.6 TPM= 63.39 Transcript Type= protein_coding chr3 98732262 98794396 98732262 98794396 + transcript2836.chr3.nic@ST3GAL6 transcript2836.chr3.nic protein_coding 98732262,98756369,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675 98732532,98756540,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98794396 Gene ID= ENSG00000064225.12 TPM= 3.17 Transcript Type= NA chr3 98732255 98794362 98732255 98794362 + ENST00000483910.5@ST3GAL6 ENST00000483910.5 protein_coding 98732255,98768430,98770879,98772813,98773920,98784945,98788036,98788326,98791841,98793675 98732532,98768529,98770956,98772916,98773983,98785040,98788222,98788463,98791993,98794362 Gene ID= ENSG00000064225.12 TPM= 6.79 Transcript Type= protein_coding chr3 98795969 98901682 98795969 98901682 - transcript2846.chr3.nnic@DCBLD2 transcript2846.chr3.nnic protein_coding 98901640,98881540,98849461,98825315,98822669,98822228,98820248,98819202,98817769,98812332,98811468,98811194,98808081,98801600,98800579,98795969 98901682,98881767,98849598,98825366,98822741,98822361,98820288,98819417,98817893,98812482,98811554,98811319,98808174,98801649,98800716,98799841 Gene ID= ENSG00000057019.15 TPM= 2.72 Transcript Type= NA chr3 98795941 98901689 98795941 98901689 - ENST00000326840.10@DCBLD2 ENST00000326840.10 protein_coding 98901122,98881540,98849461,98825315,98822669,98822228,98820248,98819202,98817769,98812332,98811468,98811194,98808081,98801600,98800579,98795941 98901689,98881767,98849598,98825366,98822741,98822361,98820288,98819417,98817893,98812482,98811554,98811319,98808174,98801649,98800716,98799841 Gene ID= ENSG00000057019.15 TPM= 50.71 Transcript Type= protein_coding chr3 99638475 99799226 99638475 99799226 + ENST00000261037.7@COL8A1 ENST00000261037.7 protein_coding 99638475,99675660,99744897,99790680,99794230 99638664,99675721,99745021,99791010,99799226 Gene ID= ENSG00000144810.15 TPM= 5.43 Transcript Type= protein_coding chr3 99817860 100178610 99817860 100178610 + transcript2854.chr3.nnic@CMSS1 transcript2854.chr3.nnic protein_coding 99817860,100010131,100146973,100160430,100162303,100166335,100167738,100171839,100172316,100176327,100178305 99818043,100010180,100147061,100160501,100162432,100166394,100167840,100171899,100172403,100176415,100178610 Gene ID= ENSG00000184220.11 TPM= 27.17 Transcript Type= NA chr3 99847923 99876203 99847923 99876203 - ENST00000383694.3@FILIP1L ENST00000383694.3 protein_coding 99876072,99847923 99876203,99851070 Gene ID= ENSG00000168386.18 TPM= 32.6 Transcript Type= protein_coding chr3 100261000 100325248 100261000 100325248 + transcript2865.chr3.nnic@TBC1D23 transcript2865.chr3.nnic protein_coding 100261000,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100316099,100319069,100320777,100323587 100261071,100279760,100281847,100283811,100290715,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100316187,100319204,100320971,100325248 Gene ID= ENSG00000036054.12 TPM= 3.02 Transcript Type= NA chr3 100261001 100325251 100261001 100325251 + ENST00000344949.9@TBC1D23 ENST00000344949.9 protein_coding 100261001,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100316099,100319069,100320777,100323587 100261071,100279760,100281847,100283811,100290701,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100316187,100319204,100320971,100325251 Gene ID= ENSG00000036054.12 TPM= 62.78 Transcript Type= protein_coding chr3 100261012 100325238 100261012 100325238 + ENST00000394144.8@TBC1D23 ENST00000394144.8 protein_coding 100261012,100279649,100281742,100283607,100290578,100295087,100295302,100296172,100297923,100299239,100302067,100304846,100306437,100310403,100311833,100316099,100319069,100320777,100323587 100261071,100279760,100281847,100283811,100290701,100295211,100295348,100296275,100298045,100299331,100302237,100304888,100306543,100310542,100311877,100316187,100319204,100320971,100325238 Gene ID= ENSG00000036054.12 TPM= 19.32 Transcript Type= protein_coding chr3 100334701 100361635 100334701 100361635 + ENST00000394140.8@NIT2 ENST00000394140.8 protein_coding 100334701,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177 100334798,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100361635 Gene ID= ENSG00000114021.11 TPM= 42.04 Transcript Type= protein_coding chr3 100334784 100356872 100334784 100356872 + transcript2869.chr3.nic@NIT2 transcript2869.chr3.nic protein_coding 100334784,100339087,100339815,100341073,100345585,100346181,100348803,100352404,100354772,100355177 100335112,100339205,100339935,100341161,100345678,100346255,100348881,100352502,100354827,100356872 Gene ID= ENSG00000114021.11 TPM= 4 Transcript Type= NA chr3 100334706 100355360 100334706 100355360 + transcript2872.chr3.nic@NIT2 transcript2872.chr3.nic protein_coding 100334706,100339087,100339815,100341073,100345585,100352404,100354772,100355177 100334798,100339205,100339935,100341161,100348881,100352502,100354827,100355360 Gene ID= ENSG00000114021.11 TPM= 2.64 Transcript Type= NA chr3 100334739 100355351 100334739 100355351 + ENST00000465368.5@NIT2 ENST00000465368.5 protein_coding 100334739,100339087,100339815,100341073,100345585,100348803,100352404,100354772,100355177 100334798,100339205,100339935,100341161,100346255,100348881,100352502,100354827,100355351 Gene ID= ENSG00000114021.11 TPM= 5.66 Transcript Type= retained_intron chr3 100363431 100401398 100363431 100401398 - ENST00000284320.5@TOMM70 ENST00000284320.5 protein_coding 100400626,100386805,100386218,100384479,100381615,100377705,100375018,100373538,100372606,100369038,100368044,100363431 100401398,100386978,100386344,100384588,100381763,100377912,100375152,100373645,100372722,100369135,100368166,100365717 Gene ID= ENSG00000154174.7 TPM= 34.41 Transcript Type= protein_coding chr3 100492560 100577450 100492560 100577450 + transcript2875.chr3.nic@TMEM45A transcript2875.chr3.nic protein_coding 100492560,100519533,100555209,100556760,100558405,100568822,100576925 100492928,100519608,100555401,100556972,100558589,100568967,100577450 Gene ID= ENSG00000181458.10 TPM= 8.15 Transcript Type= NA chr3 100492584 100577450 100492584 100577450 + transcript2876.chr3.nnic@TMEM45A transcript2876.chr3.nnic protein_coding 100492584,100519462,100555209,100556760,100558405,100568822,100576925 100492928,100519608,100555401,100556972,100558589,100568967,100577450 Gene ID= ENSG00000181458.10 TPM= 27.17 Transcript Type= NA chr3 100492619 100577444 100492619 100577444 + ENST00000323523.8@TMEM45A ENST00000323523.8 protein_coding 100492619,100555209,100556760,100558405,100568822,100576925 100492928,100555401,100556972,100558589,100568967,100577444 Gene ID= ENSG00000181458.10 TPM= 19.02 Transcript Type= protein_coding chr3 100709361 100748942 100709361 100748942 + ENST00000418917.6@TFG ENST00000418917.6 protein_coding 100709361,100713643,100719975,100728712,100732508,100736576,100744833,100748149 100709431,100713869,100720058,100728858,100732672,100736704,100744931,100748942 Gene ID= ENSG00000114354.13 TPM= 3.62 Transcript Type= protein_coding chr3 100709378 100748927 100709378 100748927 + ENST00000490574.5@TFG ENST00000490574.5 protein_coding 100709378,100713643,100719975,100728712,100732508,100736576,100744833,100748149 100709431,100713869,100720058,100728858,100732672,100736716,100744931,100748927 Gene ID= ENSG00000114354.13 TPM= 2.72 Transcript Type= protein_coding chr3 100709425 100748966 100709425 100748966 + ENST00000240851.8@TFG ENST00000240851.8 protein_coding 100709425,100713643,100719975,100728712,100732508,100736576,100744833,100748149 100709721,100713869,100720058,100728858,100732672,100736716,100744931,100748966 Gene ID= ENSG00000114354.13 TPM= 145.79 Transcript Type= protein_coding chr3 100709606 100748964 100709606 100748964 + ENST00000476228.5@TFG ENST00000476228.5 protein_coding 100709606,100713643,100719975,100728712,100732508,100736576,100744833,100748149 100709721,100713869,100720058,100728858,100732672,100736704,100744931,100748964 Gene ID= ENSG00000114354.13 TPM= 3.62 Transcript Type= protein_coding chr3 101324273 101513241 101324273 101513241 - ENST00000314261.11@SENP7 ENST00000314261.11 protein_coding 101513091,101501070,101493873,101458955,101398861,101372008,101367830,101366430,101364834,101361715,101351618,101347872,101343686,101341646,101340095,101337509,101332770,101331985,101330334,101328646,101328478,101327666,101324273 101513241,101501119,101493968,101459052,101399055,101372126,101368011,101366769,101364991,101361861,101351651,101348051,101343954,101341779,101340211,101337631,101332862,101332109,101330386,101328689,101328546,101327816,101326080 Gene ID= ENSG00000138468.15 TPM= 1.81 Transcript Type= protein_coding chr3 101561862 101566446 101561862 101566446 + ENST00000309922.6@TRMT10C ENST00000309922.6 protein_coding 101561862,101564770 101562003,101566446 Gene ID= ENSG00000174173.6 TPM= 44.37 Transcript Type= protein_coding chr3 101574095 101594437 101574095 101594437 + ENST00000265260.7@PCNP ENST00000265260.7 protein_coding 101574095,101579790,101585437,101590215,101592627 101574279,101580004,101585511,101590270,101594437 Gene ID= ENSG00000081154.11 TPM= 80.59 Transcript Type= protein_coding chr3 101574190 101594407 101574190 101594407 + ENST00000460231.5@PCNP ENST00000460231.5 protein_coding 101574190,101579842,101585437,101590215,101592627 101574279,101580004,101585511,101590270,101594407 Gene ID= ENSG00000081154.11 TPM= 44.82 Transcript Type= nonsense_mediated_decay chr3 101574194 101594437 101574194 101594437 + ENST00000469941.5@PCNP ENST00000469941.5 protein_coding 101574194,101585437,101590215,101592627 101574279,101585511,101590270,101594437 Gene ID= ENSG00000081154.11 TPM= 7.24 Transcript Type= protein_coding chr3 101648889 101677495 101648889 101677495 - ENST00000312938.4@ZBTB11 ENST00000312938.4 protein_coding 101676605,101671978,101671130,101664964,101664538,101659783,101656104,101654704,101652780,101652496,101648889 101677495,101672213,101671361,101665808,101664714,101660028,101656248,101654821,101652938,101652671,101651683 Gene ID= ENSG00000066422.4 TPM= 7.24 Transcript Type= protein_coding chr3 101681092 101686782 101681092 101686782 - ENST00000394077.7@RPL24 ENST00000394077.7 protein_coding 101686672,101686482,101685818,101682771,101682429,101681092 101686782,101686557,101685928,101682907,101682492,101681215 Gene ID= ENSG00000114391.12 TPM= 191.98 Transcript Type= protein_coding chr3 101681096 101686705 101681096 101686705 - ENST00000495401.5@RPL24 ENST00000495401.5 protein_coding 101686672,101686482,101685818,101682771,101681096 101686705,101686557,101685928,101682907,101681215 Gene ID= ENSG00000114391.12 TPM= 3.17 Transcript Type= protein_coding chr3 101681091 101686712 101681091 101686712 - ENST00000464595.1@RPL24 ENST00000464595.1 protein_coding 101686482,101685818,101682771,101682429,101681091 101686712,101685928,101682907,101682492,101681215 Gene ID= ENSG00000114391.12 TPM= 9.51 Transcript Type= retained_intron chr3 101785342 101822825 101785342 101822825 + transcript2922.chr3.nic@NXPE3 transcript2922.chr3.nic protein_coding 101785342,101801235,101807053,101816795,101821404 101785689,101801989,101807126,101817001,101822825 Gene ID= ENSG00000144815.15 TPM= 1.81 Transcript Type= NA chr3 101849514 101861022 101849514 101861022 + ENST00000326172.9@NFKBIZ ENST00000326172.9 protein_coding 101849514,101852085,101852738,101852886,101853091,101854578,101855062,101855395,101855733,101857073,101857292,101859318 101849917,101852224,101852768,101852989,101853863,101854683,101855208,101855458,101855902,101857183,101857459,101861022 Gene ID= ENSG00000144802.11 TPM= 1.81 Transcript Type= protein_coding chr3 104629335 104909943 104629335 104909943 - transcript2931.chr3.nnic@NA transcript2931.chr3.nnic NA 104909874,104907212,104817473,104629335 104909943,104907465,104817613,104630579 Gene ID= novel_gene_chr3_2932 TPM= 1.81 Transcript Type= NA chr3 104809233 104909945 104809233 104909945 - transcript2934.chr3.nnic@NA transcript2934.chr3.nnic NA 104909874,104907212,104817473,104809233 104909945,104907465,104817613,104809699 Gene ID= novel_gene_chr3_2932 TPM= 1.81 Transcript Type= NA chr3 104809233 104910038 104809233 104910038 - transcript2936.chr3.nnic@NA transcript2936.chr3.nnic NA 104909874,104907345,104817473,104809233 104910038,104907465,104817613,104809699 Gene ID= novel_gene_chr3_2932 TPM= 1.81 Transcript Type= NA chr3 105366909 105576900 105366909 105576900 + ENST00000306107.9@ALCAM ENST00000306107.9 protein_coding 105366909,105520067,105524289,105532002,105533603,105534663,105539975,105541633,105545223,105547149,105547390,105550127,105552144,105552468,105571852,105574477 105367481,105520167,105524508,105532066,105533690,105534845,105540102,105541765,105545335,105547284,105547523,105550259,105552182,105552585,105571964,105576900 Gene ID= ENSG00000170017.12 TPM= 21.73 Transcript Type= protein_coding chr3 105655461 105869043 105655461 105869043 - ENST00000264122.8@CBLB ENST00000264122.8 protein_coding 105868736,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105681479,105678431,105670233,105655461 105869043,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105681610,105678571,105670352,105659229 Gene ID= ENSG00000114423.18 TPM= 3.62 Transcript Type= protein_coding chr3 105658271 105869061 105658271 105869061 - transcript2943.chr3.nic@CBLB transcript2943.chr3.nic protein_coding 105868912,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105681479,105678431,105670233,105658271 105869061,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105681610,105678571,105670352,105659229 Gene ID= ENSG00000114423.18 TPM= 3.62 Transcript Type= NA chr3 105658271 105868954 105658271 105868954 - transcript2944.chr3.nic@CBLB transcript2944.chr3.nic protein_coding 105868736,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105678431,105670233,105658271 105868954,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105678571,105670352,105659229 Gene ID= ENSG00000114423.18 TPM= 1.81 Transcript Type= NA chr3 105658271 105869061 105658271 105869061 - transcript2945.chr3.nic@CBLB transcript2945.chr3.nic protein_coding 105868912,105867410,105853414,105776396,105751462,105745917,105740494,105737171,105734009,105720047,105703988,105702094,105693494,105685320,105681724,105678431,105670233,105658271 105869061,105867591,105853664,105776542,105751618,105746038,105740631,105737258,105734140,105720250,105704173,105702459,105693588,105685466,105681818,105678571,105670352,105659229 Gene ID= ENSG00000114423.18 TPM= 4.53 Transcript Type= NA chr3 107109790 107240589 107109790 107240589 - ENST00000607801.5@LINC00882 ENST00000607801.5 lincRNA 107240443,107129888,107109790 107240589,107129992,107110004 Gene ID= ENSG00000242759.6 TPM= 1.81 Transcript Type= lincRNA chr3 107240692 107248348 107240692 107248348 + ENST00000466734.5@DUBR ENST00000466734.5 lincRNA 107240692,107246008 107241087,107248348 Gene ID= ENSG00000243701.5 TPM= 5.43 Transcript Type= lincRNA chr3 107522936 107811324 107522936 107811324 + ENST00000415149.6@BBX ENST00000415149.6 protein_coding 107522936,107526327,107645836,107710452,107716607,107728765,107732956,107744630,107747965,107755598,107772628,107774719,107778371,107791240,107798523,107801095,107805370 107523107,107526398,107645909,107710622,107716849,107728960,107733023,107744710,107748039,107755678,107773636,107774857,107778519,107791299,107798720,107801281,107811324 Gene ID= ENSG00000114439.18 TPM= 17.21 Transcript Type= protein_coding chr3 108047067 108091027 108047067 108091027 - transcript2965.chr3.nic@CD47 transcript2965.chr3.nic protein_coding 108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108050578,108047067 108091027,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108050602,108047292 Gene ID= ENSG00000196776.14 TPM= 4.53 Transcript Type= NA chr3 108043096 108091112 108043096 108091112 - transcript2968.chr3.nnic@CD47 transcript2968.chr3.nnic protein_coding 108090863,108079991,108071093,108060745,108059452,108058337,108057477,108043096 108091112,108080344,108071182,108060852,108059544,108058429,108057569,108047292 Gene ID= ENSG00000196776.14 TPM= 9.06 Transcript Type= NA chr3 108043299 108091025 108043299 108091025 - ENST00000355354.11@CD47 ENST00000355354.11 protein_coding 108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108043299 108091025,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108047292 Gene ID= ENSG00000196776.14 TPM= 107.76 Transcript Type= protein_coding chr3 108047081 108091014 108047081 108091014 - ENST00000361309.5@CD47 ENST00000361309.5 protein_coding 108090863,108079991,108071093,108060745,108059452,108058337,108057477,108051939,108050578,108049619,108047081 108091014,108080344,108071182,108060852,108059544,108058429,108057569,108051970,108050602,108049651,108047292 Gene ID= ENSG00000196776.14 TPM= 2.72 Transcript Type= protein_coding chr3 108160812 108222570 108160812 108222570 - ENST00000264538.3@IFT57 ENST00000264538.3 protein_coding 108222111,108219410,108218535,108213931,108206628,108191521,108167793,108166854,108165431,108163663,108160812 108222570,108219572,108218653,108214021,108206696,108191643,108167864,108166985,108165493,108163729,108162655 Gene ID= ENSG00000114446.4 TPM= 67.92 Transcript Type= protein_coding chr3 108160813 108222453 108160813 108222453 - transcript2972.chr3.nic@IFT57 transcript2972.chr3.nic protein_coding 108222111,108219410,108218535,108213931,108206628,108191521,108167793,108166854,108163663,108160813 108222453,108219572,108218653,108214021,108206696,108191643,108167864,108166985,108165493,108162655 Gene ID= ENSG00000114446.4 TPM= 2.72 Transcript Type= NA chr3 111859846 111976290 111859846 111976290 + transcript2986.chr3.nic@PHLDB2 transcript2986.chr3.nic protein_coding 111859846,111884064,111913319,111919072,111920282,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423 111859878,111885412,111913702,111919215,111920419,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976290 Gene ID= ENSG00000144824.20 TPM= 1.81 Transcript Type= NA chr3 111859796 111976247 111859796 111976247 + ENST00000393925.7@PHLDB2 ENST00000393925.7 protein_coding 111859796,111884064,111913319,111919072,111920282,111932269,111939475,111940535,111945268,111948932,111952572,111953930,111962108,111966613,111967678,111969690,111973732,111974423 111859878,111885412,111913702,111919215,111920419,111932397,111939630,111940645,111945357,111949075,111952712,111954029,111962312,111966703,111967824,111969909,111973817,111976247 Gene ID= ENSG00000144824.20 TPM= 1.81 Transcript Type= protein_coding chr3 111979035 111993363 111979035 111993363 + ENST00000273359.7@ABHD10 ENST00000273359.7 protein_coding 111979035,111981784,111986264,111986914,111991377 111979203,111981967,111986375,111987051,111993363 Gene ID= ENSG00000144827.8 TPM= 70.63 Transcript Type= protein_coding chr3 112086349 112118210 112086349 112118210 + ENST00000264848.9@C3orf52 ENST00000264848.9 protein_coding 112086349,112093360,112102838,112109543,112112964,112116642 112086545,112093489,112102965,112109613,112113145,112118210 Gene ID= ENSG00000114529.12 TPM= 2.72 Transcript Type= protein_coding chr3 112532509 112561963 112532509 112561963 - ENST00000283290.9@ATG3 ENST00000283290.9 protein_coding 112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112534269,112532509 112561963,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337,112532780 Gene ID= ENSG00000144848.10 TPM= 86.93 Transcript Type= protein_coding chr3 112532510 112561916 112532510 112561916 - ENST00000402314.6@ATG3 ENST00000402314.6 protein_coding 112561457,112558376,112553280,112550192,112548533,112544057,112541803,112538146,112537735,112536475,112532510 112561916,112558417,112553329,112550262,112548640,112544106,112541884,112538180,112537890,112536602,112534337 Gene ID= ENSG00000144848.10 TPM= 3.62 Transcript Type= protein_coding chr3 112561690 112584156 112561690 112584156 + transcript2996.chr3.nic@SLC35A5 transcript2996.chr3.nic protein_coding 112561690,112563385,112569171,112570540,112573889,112580546,112582671 112561822,112563533,112569269,112570670,112573956,112581326,112584156 Gene ID= ENSG00000138459.8 TPM= 2.72 Transcript Type= NA chr3 112562010 112585577 112562010 112585577 + ENST00000492406.5@SLC35A5 ENST00000492406.5 protein_coding 112562010,112563385,112569171,112570540,112573889,112580546,112582671 112562273,112563533,112569269,112570670,112573956,112581326,112585577 Gene ID= ENSG00000138459.8 TPM= 38.03 Transcript Type= protein_coding chr3 112605266 112641141 112605266 112641141 - transcript3002.chr3.nic@CCDC80 transcript3002.chr3.nic protein_coding 112640564,112638028,112630113,112618968,112616710,112609978,112607176,112605266 112641141,112639916,112630269,112619104,112616858,112610081,112607256,112605763 Gene ID= ENSG00000091986.15 TPM= 8.15 Transcript Type= NA chr3 112990995 113018044 112990995 113018044 + transcript3015.chr3.nnic@GTPBP8 transcript3015.chr3.nnic protein_coding 112990995,112993026,112995135,112996892,112999446,113014377 112991335,112993124,112995265,112996991,112999559,113018044 Gene ID= ENSG00000163607.15 TPM= 2.72 Transcript Type= NA chr3 112990918 113001342 112990918 113001342 + ENST00000383678.6@GTPBP8 ENST00000383678.6 protein_coding 112990918,112993026,112995135,112996892,112999446,113000850 112991335,112993124,112995265,112996991,112999564,113001342 Gene ID= ENSG00000163607.15 TPM= 10.87 Transcript Type= protein_coding chr3 113002440 113019839 113002440 113019839 - ENST00000314400.9@NEPRO ENST00000314400.9 protein_coding 113019542,113017448,113013953,113013272,113012734,113011045,113010643,113008171,113002440 113019839,113017602,113014032,113013403,113012811,113011406,113010704,113008430,113006004 Gene ID= ENSG00000163608.14 TPM= 12.98 Transcript Type= protein_coding chr3 113002439 113019707 113002439 113019707 - transcript3011.chr3.nic@NEPRO transcript3011.chr3.nic protein_coding 113019542,113017448,113013953,113013272,113012734,113011045,113008171,113002439 113019707,113017602,113014032,113013403,113012811,113011406,113008430,113006004 Gene ID= ENSG00000163608.14 TPM= 2.11 Transcript Type= NA chr3 113002439 113019398 113002439 113019398 - transcript3013.chr3.nic@NEPRO transcript3013.chr3.nic protein_coding 113017448,113013953,113013272,113012734,113011045,113008171,113002439 113019398,113014032,113013403,113012811,113011406,113008430,113006004 Gene ID= ENSG00000163608.14 TPM= 2.11 Transcript Type= NA chr3 113212152 113287456 113212152 113287456 + transcript3027.chr3.nic@BOC transcript3027.chr3.nic protein_coding 113212152,113216187,113249722,113250555,113268299,113270801,113272410,113273069,113274375,113278095,113278673,113279249,113279824,113280558,113281031,113283411,113284335,113284782,113285372,113286675 113212521,113216278,113249899,113250833,113268445,113270944,113272703,113273341,113274682,113278257,113278783,113279455,113280005,113280663,113281153,113283632,113284567,113284858,113285565,113287456 Gene ID= ENSG00000144857.14 TPM= 1.81 Transcript Type= NA chr3 113211482 113287459 113211482 113287459 + ENST00000495514.5@BOC ENST00000495514.5 protein_coding 113211482,113216187,113249722,113250555,113268299,113270801,113272410,113273069,113274375,113278098,113278673,113279249,113279824,113280558,113281031,113283411,113284335,113284782,113285372,113286675 113212016,113216274,113249899,113250833,113268445,113270944,113272703,113273341,113274682,113278257,113278783,113279455,113280005,113280663,113281153,113283632,113284567,113284858,113285565,113287459 Gene ID= ENSG00000144857.14 TPM= 5.43 Transcript Type= protein_coding chr3 113444639 113515186 113444639 113515186 - transcript3031.chr3.nic@SPICE1 transcript3031.chr3.nic protein_coding 113515080,113506507,113503180,113499439,113494049,113493206,113488945,113469099,113468762,113468139,113465653,113460617,113457136,113453466,113450336,113448038,113446589,113444639 113515186,113506605,113503227,113499582,113494142,113493312,113489063,113469238,113468899,113468404,113465784,113460764,113457357,113453950,113450516,113448140,113446676,113445360 Gene ID= ENSG00000163611.11 TPM= 5.43 Transcript Type= NA chr3 113747019 113812056 113747019 113812056 + ENST00000273398.7@ATP6V1A ENST00000273398.7 protein_coding 113747019,113778741,113781050,113784224,113784696,113786232,113788713,113789732,113794872,113795090,113795876,113798243,113803583,113805354,113809335 113747113,113778835,113781178,113784438,113784833,113786383,113788875,113789840,113794994,113795204,113795939,113798446,113803677,113805525,113812056 Gene ID= ENSG00000114573.9 TPM= 40.75 Transcript Type= protein_coding chr3 113897470 113947160 113897470 113947160 + ENST00000440446.2@GRAMD1C ENST00000440446.2 protein_coding 113897470,113901031,113904140,113908958,113915701,113930714,113933511,113934432,113936266,113938086,113939886,113940240,113945398 113897813,113901146,113904272,113909120,113915838,113930832,113933653,113934535,113936442,113938143,113939996,113940345,113947160 Gene ID= ENSG00000178075.19 TPM= 4.53 Transcript Type= protein_coding chr3 113964137 114056613 113964137 114056613 - ENST00000295878.7@CCDC191 ENST00000295878.7 protein_coding 114056377,114053597,114046591,114042703,114036608,114034925,114031626,114018678,114010772,114005508,114004637,114002456,114001595,113980650,113978858,113978186,113964137 114056613,114053635,114046732,114042846,114036786,114035148,114031779,114018868,114011021,114005962,114004746,114002538,114001696,113980793,113979010,113978331,113965359 Gene ID= ENSG00000163617.10 TPM= 1.81 Transcript Type= protein_coding chr3 113964139 114056529 113964139 114056529 - transcript3045.chr3.nic@CCDC191 transcript3045.chr3.nic protein_coding 114056377,114046591,114042703,114036608,114034925,114031626,114018678,114010772,114005508,114004637,114002456,114001595,113980650,113978858,113978186,113964139 114056529,114046732,114042846,114036786,114035148,114031779,114018868,114011021,114005962,114004746,114002538,114001696,113980793,113979010,113978331,113965359 Gene ID= ENSG00000163617.10 TPM= 1.81 Transcript Type= NA chr3 114056759 114088344 114056759 114088344 + transcript3046.chr3.nic@QTRT2 transcript3046.chr3.nic protein_coding 114056759,114056999,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673 114056864,114057106,114065278,114066283,114068063,114070838,114076942,114080057,114082794,114088344 Gene ID= ENSG00000151576.10 TPM= 2.72 Transcript Type= NA chr3 114056737 114088422 114056737 114088422 + ENST00000281273.8@QTRT2 ENST00000281273.8 protein_coding 114056737,114056999,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673 114056864,114057106,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088422 Gene ID= ENSG00000151576.10 TPM= 2.72 Transcript Type= protein_coding chr3 114056751 114088344 114056751 114088344 + transcript3049.chr3.nic@QTRT2 transcript3049.chr3.nic protein_coding 114056751,114065237,114066228,114067987,114070626,114076743,114079906,114082553,114085673 114056864,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088344 Gene ID= ENSG00000151576.10 TPM= 1.81 Transcript Type= NA chr3 114056735 114088349 114056735 114088349 + ENST00000485050.5@QTRT2 ENST00000485050.5 protein_coding 114056735,114065237,114066228,114067987,114070626,114076743,114079906,114082677,114085673 114056864,114065457,114066283,114068063,114070838,114076942,114080057,114082794,114088349 Gene ID= ENSG00000151576.10 TPM= 2.72 Transcript Type= protein_coding chr3 114338107 115100296 114338107 115100296 - transcript3061.chr3.nic@ZBTB20 transcript3061.chr3.nic protein_coding 115100175,114974366,114900304,114801101,114693528,114500352,114389005,114380217,114350274,114338107 115100296,114974416,114900342,114801174,114693575,114500391,114389105,114380404,114351878,114339426 Gene ID= ENSG00000181722.16 TPM= 3.47 Transcript Type= NA chr3 114338107 114625018 114338107 114625018 - transcript3068.chr3.nic@ZBTB20 transcript3068.chr3.nic protein_coding 114624877,114500352,114389005,114380777,114380217,114350274,114338107 114625018,114500391,114389105,114380940,114380404,114351878,114339426 Gene ID= ENSG00000181722.16 TPM= 4.75 Transcript Type= NA chr3 114338107 114625005 114338107 114625005 - transcript3070.chr3.nnic@ZBTB20 transcript3070.chr3.nnic protein_coding 114624877,114624116,114500352,114389005,114380217,114350274,114338107 114625005,114624243,114500391,114389105,114380404,114351878,114339426 Gene ID= ENSG00000181722.16 TPM= 4.37 Transcript Type= NA chr3 114338107 114454942 114338107 114454942 - transcript3074.chr3.nic@ZBTB20 transcript3074.chr3.nic protein_coding 114454579,114389005,114380217,114350274,114338107 114454942,114389105,114380404,114351878,114339426 Gene ID= ENSG00000181722.16 TPM= 4.07 Transcript Type= NA chr3 114338652 114624206 114338652 114624206 - ENST00000481632.5@ZBTB20 ENST00000481632.5 protein_coding 114624116,114500352,114389005,114380217,114350274,114338652 114624206,114500391,114389105,114380404,114351878,114339426 Gene ID= ENSG00000181722.16 TPM= 2.34 Transcript Type= protein_coding chr3 115808511 116086560 115808511 116086560 - transcript3077.chr3.nic@LSAMP transcript3077.chr3.nic protein_coding 116086324,116019515,115852483,115842458,115841845,115834562,115816614,115808511 116086560,116019640,115852617,115842578,115841993,115834597,115816646,115810414 Gene ID= ENSG00000185565.11 TPM= 2.72 Transcript Type= NA chr3 118925924 119034850 118925924 119034850 - transcript3081.chr3.nic@IGSF11 transcript3081.chr3.nic protein_coding 119034531,118930112,118928509,118925924 119034850,118930275,118928716,118926256 Gene ID= ENSG00000144847.12 TPM= 1.81 Transcript Type= NA chr3 118900627 119034888 118900627 119034888 - ENST00000393775.6@IGSF11 ENST00000393775.6 protein_coding 119034531,118930112,118928509,118926101,118905596,118904648,118900627 119034888,118930275,118928716,118926256,118905718,118904798,118902961 Gene ID= ENSG00000144847.12 TPM= 2.72 Transcript Type= protein_coding chr3 119211733 119240671 119211733 119240671 - transcript3082.chr3.nic@B4GALT4 transcript3082.chr3.nic protein_coding 119240361,119236853,119235145,119229847,119226809,119224058,119218650,119216240,119211733 119240671,119237070,119235227,119230244,119227041,119224245,119218772,119216344,119212681 Gene ID= ENSG00000121578.12 TPM= 1.99 Transcript Type= NA chr3 119211733 119240671 119211733 119240671 - transcript3088.chr3.nic@B4GALT4 transcript3088.chr3.nic protein_coding 119240565,119236853,119229847,119226809,119224058,119218650,119216240,119211733 119240671,119237070,119230244,119227041,119224245,119218772,119216344,119212681 Gene ID= ENSG00000121578.12 TPM= 2.44 Transcript Type= NA chr3 119211733 119240952 119211733 119240952 - transcript3091.chr3.nic@B4GALT4 transcript3091.chr3.nic protein_coding 119240850,119236853,119229847,119226809,119224058,119218712,119216240,119211733 119240952,119237070,119230244,119227041,119224245,119218772,119216344,119212681 Gene ID= ENSG00000121578.12 TPM= 1.99 Transcript Type= NA chr3 119211732 119240639 119211732 119240639 - ENST00000483209.5@B4GALT4 ENST00000483209.5 protein_coding 119240361,119236853,119229847,119226809,119224058,119218650,119216240,119211732 119240639,119237070,119230244,119227041,119224245,119218772,119216344,119212681 Gene ID= ENSG00000121578.12 TPM= 3.35 Transcript Type= protein_coding chr3 119211742 119240946 119211742 119240946 - ENST00000359213.7@B4GALT4 ENST00000359213.7 protein_coding 119240850,119236853,119235145,119229847,119226809,119224058,119218650,119216240,119211742 119240946,119237070,119235227,119230244,119227041,119224245,119218772,119216344,119212681 Gene ID= ENSG00000121578.12 TPM= 1.99 Transcript Type= protein_coding chr3 119294373 119420714 119294373 119420714 + ENST00000264245.8@ARHGAP31 ENST00000264245.8 protein_coding 119294373,119365316,119368372,119380904,119382292,119383084,119390785,119393467,119399199,119401822,119409496,119413856 119295004,119365418,119368516,119380986,119382399,119383226,119390983,119393591,119399261,119402397,119409776,119420714 Gene ID= ENSG00000031081.10 TPM= 6.34 Transcript Type= protein_coding chr3 119430775 119463656 119430775 119463656 - transcript3097.chr3.nic@TMEM39A transcript3097.chr3.nic protein_coding 119463336,119461962,119458018,119452447,119447018,119437755,119436791,119435755,119434762,119430775 119463656,119462148,119458240,119452530,119447172,119438103,119436978,119435935,119434882,119432214 Gene ID= ENSG00000176142.12 TPM= 2.72 Transcript Type= NA chr3 119431733 119463656 119431733 119463656 - transcript3099.chr3.nic@TMEM39A transcript3099.chr3.nic protein_coding 119463336,119461962,119458018,119452447,119447018,119436791,119435755,119434762,119431733 119463656,119462148,119458240,119452530,119447172,119438103,119435935,119434882,119432214 Gene ID= ENSG00000176142.12 TPM= 1.81 Transcript Type= NA chr3 119430776 119463656 119430776 119463656 - transcript3100.chr3.nic@TMEM39A transcript3100.chr3.nic protein_coding 119463336,119461962,119458018,119452447,119447018,119437755,119436791,119434762,119430776 119463656,119462148,119458184,119452530,119447172,119438103,119436978,119434882,119432214 Gene ID= ENSG00000176142.12 TPM= 2.26 Transcript Type= NA chr3 119429500 119463682 119429500 119463682 - ENST00000319172.9@TMEM39A ENST00000319172.9 protein_coding 119463336,119461962,119458018,119452447,119447018,119437755,119436791,119434762,119429500 119463682,119462148,119458240,119452530,119447172,119438103,119436978,119434882,119432214 Gene ID= ENSG00000176142.12 TPM= 14.94 Transcript Type= protein_coding chr3 119445278 119463656 119445278 119463656 - transcript3103.chr3.nic@TMEM39A transcript3103.chr3.nic protein_coding 119463336,119461962,119458018,119452447,119445278 119463656,119462148,119458240,119452530,119447172 Gene ID= ENSG00000176142.12 TPM= 1.81 Transcript Type= NA chr3 119468938 119494708 119468938 119494708 + ENST00000295588.8@POGLUT1 ENST00000295588.8 protein_coding 119468938,119469820,119471309,119477313,119480051,119485328,119486833,119488929,119490551,119491518,119492282 119469106,119469910,119471452,119477448,119480172,119485387,119486932,119488987,119490718,119491574,119494708 Gene ID= ENSG00000163389.10 TPM= 33.05 Transcript Type= protein_coding chr3 119468963 119494565 119468963 119494565 + transcript3108.chr3.nnic@POGLUT1 transcript3108.chr3.nnic protein_coding 119468963,119469820,119471309,119477313,119480051,119485328,119486833,119488929,119490551,119491518,119492282 119469263,119469910,119471452,119477448,119480172,119485387,119486932,119488987,119490718,119491574,119494565 Gene ID= ENSG00000163389.10 TPM= 2.26 Transcript Type= NA chr3 119468963 119488899 119468963 119488899 + transcript3110.chr3.nic@POGLUT1 transcript3110.chr3.nic protein_coding 119468963,119469820,119471309,119477313,119480051,119485328,119486833 119469106,119469910,119471452,119477448,119480172,119485387,119488899 Gene ID= ENSG00000163389.10 TPM= 2.72 Transcript Type= NA chr3 119498532 119525090 119498532 119525090 + ENST00000494664.5@TIMMDC1 ENST00000494664.5 protein_coding 119498532,119500695,119503532,119503954,119513641,119517205,119523606 119498927,119500860,119503620,119504021,119513719,119517315,119525090 Gene ID= ENSG00000113845.9 TPM= 59.31 Transcript Type= protein_coding chr3 119498550 119524087 119498550 119524087 + transcript3114.chr3.nnic@TIMMDC1 transcript3114.chr3.nnic protein_coding 119498550,119500695,119503532,119503954,119513641,119517205,119523606 119498588,119500860,119503620,119504021,119513719,119517315,119524087 Gene ID= ENSG00000113845.9 TPM= 4.07 Transcript Type= NA chr3 119579420 119589944 119579420 119589944 + transcript3118.chr3.nic@ADPRH transcript3118.chr3.nic protein_coding 119579420,119580485,119582134,119586285,119587464 119579851,119580636,119582467,119586645,119589944 Gene ID= ENSG00000144843.11 TPM= 4.07 Transcript Type= NA chr3 119579676 119589945 119579676 119589945 + ENST00000357003.7@ADPRH ENST00000357003.7 protein_coding 119579676,119580551,119582134,119586285,119587464 119579851,119580636,119582467,119586645,119589945 Gene ID= ENSG00000144843.11 TPM= 7.7 Transcript Type= protein_coding chr3 119669532 119677346 119669532 119677346 - ENST00000484810.5@COX17 ENST00000484810.5 protein_coding 119677204,119676862,119675145,119669532 119677346,119676966,119675233,119669665 Gene ID= ENSG00000138495.6 TPM= 8.15 Transcript Type= protein_coding chr3 119674379 119677364 119674379 119677364 - ENST00000497116.1@COX17 ENST00000497116.1 protein_coding 119677204,119675145,119674379 119677364,119675233,119674788 Gene ID= ENSG00000138495.6 TPM= 1.81 Transcript Type= protein_coding chr3 120394277 120451011 120394277 120451011 - transcript3146.chr3.nic@FSTL1 transcript3146.chr3.nic protein_coding 120450684,120415923,120411854,120410952,120409532,120404853,120403242,120402808,120399883,120394277 120451011,120416027,120411983,120410984,120409662,120404971,120403354,120402918,120399959,120396996 Gene ID= ENSG00000163430.11 TPM= 49.96 Transcript Type= NA chr3 120596357 120602328 120596357 120602328 + ENST00000491335.1@NDUFB4 ENST00000491335.1 protein_coding 120596357,120601111,120602208 120596646,120601257,120602328 Gene ID= ENSG00000065518.7 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr3 120596328 120602324 120596328 120602324 + ENST00000485064.1@NDUFB4 ENST00000485064.1 protein_coding 120596328,120601111 120596539,120602324 Gene ID= ENSG00000065518.7 TPM= 1.81 Transcript Type= protein_coding chr3 120686681 120742537 120686681 120742537 - ENST00000273375.7@RABL3 ENST00000273375.7 protein_coding 120742462,120730696,120709780,120706000,120698423,120694153,120690449,120686681 120742537,120730787,120709909,120706114,120698573,120694224,120690487,120689888 Gene ID= ENSG00000144840.8 TPM= 53.43 Transcript Type= protein_coding chr3 120742732 120783069 120742732 120783069 + ENST00000283875.5@GTF2E1 ENST00000283875.5 protein_coding 120742732,120750523,120770728,120776423,120781043 120742794,120751000,120770929,120776664,120783069 Gene ID= ENSG00000153767.9 TPM= 11.77 Transcript Type= protein_coding chr3 121631398 121660943 121631398 121660943 - transcript3176.chr3.nic@HCLS1 transcript3176.chr3.nic protein_coding 121660820,121658264,121657279,121647319,121642927,121637146,121636434,121635735,121634207,121633067,121632332,121632101,121631398 121660943,121658347,121657352,121647448,121644928,121637256,121636489,121635804,121634418,121633171,121632563,121632184,121631982 Gene ID= ENSG00000180353.10 TPM= 5.43 Transcript Type= NA chr3 121631399 121660911 121631399 121660911 - ENST00000314583.7@HCLS1 ENST00000314583.7 protein_coding 121660820,121658264,121657279,121647319,121644818,121642927,121637146,121636434,121635735,121634207,121633067,121632332,121632101,121631399 121660911,121658347,121657352,121647448,121644928,121642981,121637256,121636489,121635804,121634418,121633171,121632563,121632184,121631982 Gene ID= ENSG00000180353.10 TPM= 124.06 Transcript Type= protein_coding chr3 121769999 121835069 121769999 121835069 - transcript3184.chr3.nnic@IQCB1 transcript3184.chr3.nnic protein_coding 121834966,121834391,121828861,121828470,121826051,121808916,121807344,121799196,121797118,121795457,121790073,121781743,121772557,121769999 121835069,121834479,121828972,121828632,121826180,121809009,121807443,121799374,121797227,121795566,121790215,121781874,121772713,121770574 Gene ID= ENSG00000173226.16 TPM= 1.81 Transcript Type= NA chr3 121769763 121835079 121769763 121835079 - ENST00000310864.10@IQCB1 ENST00000310864.10 protein_coding 121834966,121834391,121828861,121828470,121826051,121808916,121807344,121799196,121797118,121795457,121790073,121788284,121781743,121772557,121769763 121835079,121834479,121828972,121828632,121826180,121809009,121807443,121799374,121797227,121795566,121790215,121788432,121781874,121772713,121770574 Gene ID= ENSG00000173226.16 TPM= 6.34 Transcript Type= protein_coding chr3 121835215 121886526 121835215 121886526 + ENST00000273668.6@EAF2 ENST00000273668.6 protein_coding 121835215,121844453,121854687,121857011,121872537,121886342 121835391,121844547,121854823,121857156,121872788,121886526 Gene ID= ENSG00000145088.8 TPM= 6.34 Transcript Type= protein_coding chr3 121992031 122022310 121992031 122022310 - transcript3195.chr3.nic@ILDR1 transcript3195.chr3.nic protein_coding 122022020,122006991,122005244,122001745,122001308,121994182,121992031 122022310,122007161,122005393,122001864,122001454,121994313,121993970 Gene ID= ENSG00000145103.12 TPM= 1.81 Transcript Type= NA chr3 122055374 122121136 122055374 122121136 + ENST00000330540.6@CD86 ENST00000330540.6 protein_coding 122055374,122091601,122103512,122106198,122109265,122118048,122119438 122055503,122091650,122103847,122106500,122109408,122118093,122121136 Gene ID= ENSG00000114013.15 TPM= 1.81 Transcript Type= protein_coding chr3 122325244 122341972 122325244 122341972 + ENST00000264474.3@CSTA ENST00000264474.3 protein_coding 122325244,122337547,122341439 122325358,122337648,122341972 Gene ID= ENSG00000121552.3 TPM= 5.43 Transcript Type= protein_coding chr3 122359591 122383231 122359591 122383231 - ENST00000291458.9@CCDC58 ENST00000291458.9 protein_coding 122383174,122371675,122368176,122362968,122359591 122383231,122371800,122368322,122363027,122359919 Gene ID= ENSG00000160124.9 TPM= 2.72 Transcript Type= protein_coding chr3 122384182 122412334 122384182 122412334 + ENST00000477892.5@FAM162A ENST00000477892.5 protein_coding 122384182,122402760,122404258,122407281,122409739 122384299,122402882,122404363,122407389,122412334 Gene ID= ENSG00000114023.15 TPM= 147.6 Transcript Type= protein_coding chr3 122423590 122514945 122423590 122514945 - transcript3207.chr3.nic@KPNA1 transcript3207.chr3.nic protein_coding 122514875,122496437,122467322,122463942,122461224,122453870,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122423590 122514945,122496570,122467429,122464041,122461318,122454001,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172 Gene ID= ENSG00000114030.12 TPM= 5.43 Transcript Type= NA chr3 122424875 122514969 122424875 122514969 - transcript3210.chr3.nic@KPNA1 transcript3210.chr3.nic protein_coding 122514757,122496437,122467322,122463942,122461224,122451976,122451534,122449574,122442038,122437170,122433661,122427538,122424875 122514969,122496570,122467429,122464041,122461318,122452064,122451633,122449737,122442116,122437295,122433788,122427716,122427172 Gene ID= ENSG00000114030.12 TPM= 3.62 Transcript Type= NA chr3 122527925 122564299 122527925 122564299 - transcript3215.chr3.nnic@PARP9 transcript3215.chr3.nnic protein_coding 122564245,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122530755,122527925 122564299,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122530895,122528743 Gene ID= ENSG00000138496.16 TPM= 3.59 Transcript Type= NA chr3 122527915 122564242 122527915 122564242 - transcript3219.chr3.nic@PARP9 transcript3219.chr3.nic protein_coding 122564111,122559606,122558329,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527915 122564242,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743 Gene ID= ENSG00000138496.16 TPM= 7.81 Transcript Type= NA chr3 122527915 122564299 122527915 122564299 - transcript3220.chr3.nnic@PARP9 transcript3220.chr3.nnic protein_coding 122564245,122559606,122558329,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527915 122564299,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743 Gene ID= ENSG00000138496.16 TPM= 16.86 Transcript Type= NA chr3 122527915 122564299 122527915 122564299 - transcript3224.chr3.nnic@PARP9 transcript3224.chr3.nnic protein_coding 122564245,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527915 122564299,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743 Gene ID= ENSG00000138496.16 TPM= 48.56 Transcript Type= NA chr3 122527924 122564577 122527924 122564577 - ENST00000477522.6@PARP9 ENST00000477522.6 protein_coding 122564439,122559606,122558434,122555286,122552418,122550584,122545432,122540472,122536934,122536168,122527924 122564577,122559709,122558467,122556121,122552639,122550802,122545489,122540852,122537073,122536342,122528743 Gene ID= ENSG00000138496.16 TPM= 22.75 Transcript Type= protein_coding chr3 122564238 122575203 122564238 122575203 + ENST00000296161.8@DTX3L ENST00000296161.8 protein_coding 122564238,122565859,122568489,122570455,122571678 122564613,122566070,122570024,122570672,122575203 Gene ID= ENSG00000163840.9 TPM= 15.39 Transcript Type= protein_coding chr3 122680618 122730840 122680618 122730840 + ENST00000474629.6@PARP14 ENST00000474629.6 protein_coding 122680618,122685185,122687080,122692301,122695426,122699390,122703742,122704527,122708190,122713424,122713872,122714262,122718071,122718359,122720255,122727812,122728308 122681070,122685318,122687113,122692543,122695662,122701635,122703978,122704748,122708268,122713573,122713934,122714429,122718277,122718958,122720388,122727986,122730840 Gene ID= ENSG00000173193.13 TPM= 11.77 Transcript Type= protein_coding chr3 122740003 122793824 122740003 122793824 - ENST00000306103.2@HSPBAP1 ENST00000306103.2 protein_coding 122793617,122777721,122768701,122759224,122755260,122752591,122741003,122740003 122793824,122777906,122768882,122759360,122755431,122752674,122741113,122740875 Gene ID= ENSG00000169087.10 TPM= 8.15 Transcript Type= protein_coding chr3 122794795 122881139 122794795 122881139 + ENST00000261038.5@DIRC2 ENST00000261038.5 protein_coding 122794795,122806857,122826800,122833317,122845763,122856307,122860075,122872415,122879263 122795535,122806950,122827065,122833446,122845871,122856374,122860202,122872597,122881139 Gene ID= ENSG00000138463.8 TPM= 46.18 Transcript Type= protein_coding chr3 123067070 123162104 123067070 123162104 + ENST00000316218.11@PDIA5 ENST00000316218.11 protein_coding 123067070,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123130480,123145522,123146099,123150234,123154971,123161321,123161880 123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123130616,123145592,123146259,123150364,123155041,123161455,123162104 Gene ID= ENSG00000065485.19 TPM= 91.69 Transcript Type= protein_coding chr3 123067062 123162104 123067062 123162104 + ENST00000489923.5@PDIA5 ENST00000489923.5 protein_coding 123067062,123089168,123092355,123102411,123102751,123106749,123110944,123116231,123124066,123124272,123145522,123146118,123150234,123154971,123161321,123161880 123067206,123089294,123092442,123102494,123102796,123106841,123111004,123116298,123124157,123124343,123145592,123146259,123150364,123155041,123161455,123162104 Gene ID= ENSG00000065485.19 TPM= 6.57 Transcript Type= nonsense_mediated_decay chr3 123282298 123449088 123282298 123449088 - transcript3259.chr3.nic@ADCY5 transcript3259.chr3.nic protein_coding 123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296980,123296084,123291113,123289750,123286685,123282298 123449088,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300295,123297382,123297054,123296216,123291376,123289954,123286809,123284736 Gene ID= ENSG00000173175.14 TPM= 2.72 Transcript Type= NA chr3 123282296 123449758 123282296 123449758 - ENST00000462833.5@ADCY5 ENST00000462833.5 protein_coding 123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318020,123314235,123304067,123303055,123300120,123297353,123296084,123291113,123289750,123286685,123282296 123449758,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123314322,123304183,123303219,123300295,123297382,123296216,123291376,123289954,123286809,123284736 Gene ID= ENSG00000173175.14 TPM= 7.24 Transcript Type= protein_coding chr3 123282298 123449747 123282298 123449747 - transcript3261.chr3.nnic@ADCY5 transcript3261.chr3.nnic protein_coding 123447412,123352432,123347782,123332564,123330889,123328644,123327618,123325322,123320749,123319674,123318028,123282298 123449747,123352581,123347903,123332675,123331016,123328802,123327759,123325462,123320771,123319818,123318117,123282404 Gene ID= ENSG00000173175.14 TPM= 1.81 Transcript Type= NA chr3 123612298 123701166 123612298 123701166 - transcript3263.chr3.nic@MYLK transcript3263.chr3.nic protein_coding 123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123647224,123640287,123638071,123629474,123626818,123620207,123618639,123612298 123701166,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123647427,123640504,123638194,123629626,123626941,123620336,123618770,123614349 Gene ID= ENSG00000065534.18 TPM= 33.96 Transcript Type= NA chr3 123612298 123701021 123612298 123701021 - transcript3266.chr3.nic@MYLK transcript3266.chr3.nic protein_coding 123700020,123692735,123682224,123667137,123666219,123664105,123657126,123649162,123648971,123640287,123638071,123629474,123626818,123620207,123618639,123612298 123701021,123692851,123682310,123667187,123666346,123664258,123657428,123649194,123649064,123640504,123638194,123629626,123626941,123620336,123618770,123614349 Gene ID= ENSG00000065534.18 TPM= 4.98 Transcript Type= NA chr3 124033362 124395527 124033362 124395527 + transcript3274.chr3.nnic@KALRN transcript3274.chr3.nnic protein_coding 124033362,124227990,124234829,124264498,124268743,124298791,124325980,124329861,124334265,124347143,124384845,124395135 124033813,124228064,124234943,124264690,124269255,124298913,124326171,124329992,124334495,124347265,124385036,124395527 Gene ID= ENSG00000160145.15 TPM= 1.81 Transcript Type= NA chr3 124504739 124675427 124504739 124675427 + ENST00000393496.5@KALRN ENST00000393496.5 protein_coding 124504739,124562843,124632420,124633849,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364 124504950,124563089,124632703,124633953,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124675427 Gene ID= ENSG00000160145.15 TPM= 1.36 Transcript Type= processed_transcript chr3 124584633 124675425 124584633 124675425 + transcript3277.chr3.nic@KALRN transcript3277.chr3.nic protein_coding 124584633,124632420,124633849,124650808,124655601,124657448,124657734,124658431,124659365,124660923,124661851,124666449,124667012,124671660,124674364 124584906,124632703,124633953,124650938,124655667,124657551,124657803,124658517,124659457,124660973,124661928,124666634,124667183,124671898,124675425 Gene ID= ENSG00000160145.15 TPM= 6.79 Transcript Type= NA chr3 124730366 124749273 124730366 124749273 + ENST00000232607.6@UMPS ENST00000232607.6 protein_coding 124730366,124735093,124737568,124740024,124742152,124743915 124730627,124735246,124738239,124740199,124742266,124749273 Gene ID= ENSG00000114491.13 TPM= 39.84 Transcript Type= protein_coding chr3 124762951 124887600 124762951 124887600 - transcript3295.chr3.nic@ITGB5 transcript3295.chr3.nic protein_coding 124886931,124873446,124859242,124848309,124841383,124821313,124819739,124809022,124796388,124773690,124769013,124766226,124764391,124762951 124887600,124873531,124859446,124848558,124841551,124821474,124819834,124809156,124796817,124773912,124769113,124766345,124764557,124763718 Gene ID= ENSG00000082781.11 TPM= 7.43 Transcript Type= NA chr3 124761950 124887482 124761950 124887482 - transcript3296.chr3.nic@ITGB5 transcript3296.chr3.nic protein_coding 124886931,124873446,124859242,124848309,124841383,124821313,124819739,124817621,124796388,124773690,124769013,124766226,124764391,124761950 124887482,124873531,124859446,124848558,124841551,124821474,124819834,124817710,124796817,124773912,124769113,124766345,124764557,124763718 Gene ID= ENSG00000082781.11 TPM= 7.43 Transcript Type= NA chr3 124761948 124887297 124761948 124887297 - ENST00000296181.8@ITGB5 ENST00000296181.8 protein_coding 124886931,124873446,124859242,124848309,124841383,124821313,124819739,124817621,124809022,124796388,124773690,124769013,124766226,124764391,124761948 124887297,124873531,124859446,124848558,124841551,124821474,124819834,124817710,124809156,124796817,124773912,124769113,124766345,124764557,124763718 Gene ID= ENSG00000082781.11 TPM= 107.94 Transcript Type= protein_coding chr3 124965710 125055958 124965710 125055958 - ENST00000311127.8@HEG1 ENST00000311127.8 protein_coding 125055575,125029195,125027205,125020792,125019262,125012623,125010439,125009705,125005265,125002257,125001852,124997689,124990944,124990787,124977859,124973731,124965710 125055958,125029488,125027507,125021130,125019597,125013990,125010555,125009824,125005368,125002315,125002012,124997823,124990986,124990824,124977946,124973905,124970801 Gene ID= ENSG00000173706.12 TPM= 8.15 Transcript Type= protein_coding chr3 125083157 125212765 125083157 125212765 - ENST00000469902.5@SLC12A8 ENST00000469902.5 protein_coding 125212700,125211299,125190375,125187237,125177743,125135669,125120599,125118769,125110189,125107481,125092101,125091439,125088310,125083157 125212765,125211394,125190521,125187428,125177974,125135782,125120686,125118856,125110335,125108126,125092198,125091556,125088370,125084052 Gene ID= ENSG00000221955.10 TPM= 1.81 Transcript Type= protein_coding chr3 125225561 125375354 125225561 125375354 - ENST00000360647.8@ZNF148 ENST00000360647.8 protein_coding 125375102,125331158,125323309,125313308,125288103,125279124,125277726,125234211,125225561 125375354,125331238,125323444,125313656,125288228,125279247,125277809,125234329,125233939 Gene ID= ENSG00000163848.19 TPM= 14.49 Transcript Type= protein_coding chr3 125446643 125520206 125446643 125520206 - transcript3317.chr3.nnic@SNX4 transcript3317.chr3.nnic protein_coding 125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125470566,125469454,125460771,125457266,125453810,125451305,125446643 125520206,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125470661,125469519,125460860,125457365,125453955,125451419,125447826 Gene ID= ENSG00000114520.10 TPM= 2.72 Transcript Type= NA chr3 125446653 125520202 125446653 125520202 - transcript3318.chr3.nnic@SNX4 transcript3318.chr3.nnic protein_coding 125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125449297,125446653 125520202,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125449411,125447826 Gene ID= ENSG00000114520.10 TPM= 3.62 Transcript Type= NA chr3 125446643 125520202 125446643 125520202 - transcript3323.chr3.nic@SNX4 transcript3323.chr3.nic protein_coding 125520032,125504623,125498059,125497834,125497341,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125446643 125520202,125504744,125498194,125497983,125497388,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125447826 Gene ID= ENSG00000114520.10 TPM= 3.62 Transcript Type= NA chr3 125446644 125520197 125446644 125520197 - ENST00000251775.8@SNX4 ENST00000251775.8 protein_coding 125520032,125504623,125498059,125497834,125497341,125489408,125480247,125476695,125469454,125460771,125457266,125453810,125451305,125446644 125520197,125504744,125498194,125497983,125497388,125489463,125480319,125476756,125469519,125460860,125457365,125453955,125451419,125447826 Gene ID= ENSG00000114520.10 TPM= 111.38 Transcript Type= protein_coding chr3 125916607 125930005 125916607 125930005 + transcript3330.chr3.nic@FAM86JP transcript3330.chr3.nic transcribed_unprocessed_pseudogene 125916607,125918864,125920825,125922464,125923664,125923879,125924966,125928495 125916817,125918926,125920905,125922565,125923796,125924140,125925115,125930005 Gene ID= ENSG00000171084.15 TPM= 2.72 Transcript Type= NA chr3 125916609 125930007 125916609 125930007 + transcript3333.chr3.nnic@FAM86JP transcript3333.chr3.nnic transcribed_unprocessed_pseudogene 125916609,125918864,125920825,125923879,125924966,125928495 125916719,125918926,125920905,125924140,125925115,125930007 Gene ID= ENSG00000171084.15 TPM= 1.81 Transcript Type= NA chr3 125916620 125930010 125916620 125930010 + ENST00000467239.5@FAM86JP ENST00000467239.5 transcribed_unprocessed_pseudogene 125916620,125918864,125920825,125924966,125928495 125916719,125918926,125920905,125925115,125930010 Gene ID= ENSG00000171084.15 TPM= 1.81 Transcript Type= processed_transcript chr3 125928845 125990572 125928845 125990572 - transcript3335.chr3.nnic@ALG1L transcript3335.chr3.nnic protein_coding 125990422,125933575,125932650,125931638,125930557,125928845 125990572,125933696,125932709,125931752,125930629,125929567 Gene ID= ENSG00000189366.9 TPM= 3.62 Transcript Type= NA chr3 126006287 126084294 126006287 126084294 - transcript3339.chr3.nic@SLC41A3 transcript3339.chr3.nic protein_coding 126084093,126067947,126056358,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006287 126084294,126068246,126056513,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225 Gene ID= ENSG00000114544.16 TPM= 6.11 Transcript Type= NA chr3 126006358 126084039 126006358 126084039 - transcript3344.chr3.nic@SLC41A3 transcript3344.chr3.nic protein_coding 126083929,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006358 126084039,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225 Gene ID= ENSG00000114544.16 TPM= 10.64 Transcript Type= NA chr3 126005665 126084346 126005665 126084346 - transcript3351.chr3.nic@SLC41A3 transcript3351.chr3.nic protein_coding 126084093,126067947,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126005665 126084346,126068246,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225 Gene ID= ENSG00000114544.16 TPM= 7.7 Transcript Type= NA chr3 126006373 126084304 126006373 126084304 - ENST00000315891.10@SLC41A3 ENST00000315891.10 protein_coding 126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126007114,126006373 126084304,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225,126006564 Gene ID= ENSG00000114544.16 TPM= 7.7 Transcript Type= protein_coding chr3 126006355 126084109 126006355 126084109 - ENST00000360370.8@SLC41A3 ENST00000360370.8 protein_coding 126084093,126067947,126050943,126033607,126026335,126022786,126016731,126015494,126012615,126008732,126006355 126084109,126068246,126051050,126033678,126026479,126022932,126016875,126015573,126012749,126008880,126007225 Gene ID= ENSG00000114544.16 TPM= 72.37 Transcript Type= protein_coding chr3 126103562 126181029 126103562 126181029 - transcript3361.chr3.nic@ALDH1L1 transcript3361.chr3.nic protein_coding 126180800,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103562 126181029,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846 Gene ID= ENSG00000144908.13 TPM= 36.24 Transcript Type= NA chr3 126103573 126180802 126103573 126180802 - ENST00000393434.6@ALDH1L1 ENST00000393434.6 protein_coding 126180476,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103573 126180802,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846 Gene ID= ENSG00000144908.13 TPM= 126.64 Transcript Type= protein_coding chr3 126103571 126179919 126103571 126179919 - ENST00000472186.5@ALDH1L1 ENST00000472186.5 protein_coding 126179715,126160853,126158405,126157343,126155402,126154554,126153444,126150406,126146835,126137813,126136764,126135535,126131384,126130223,126125616,126124364,126118005,126114557,126112782,126109944,126107141,126105726,126103571 126179919,126161002,126158639,126157508,126155503,126154643,126153581,126150531,126146926,126137960,126136883,126135662,126131534,126130293,126125721,126124451,126118098,126114656,126112880,126110109,126107246,126105925,126103846 Gene ID= ENSG00000144908.13 TPM= 6.36 Transcript Type= protein_coding chr3 126180065 126210169 126180065 126210169 + ENST00000500232.2@ALDH1L1-AS2 ENST00000500232.2 antisense_RNA 126180065,126208326 126180544,126210169 Gene ID= ENSG00000246022.2 TPM= 4.53 Transcript Type= antisense_RNA chr3 126458903 126476011 126458903 126476011 - transcript3378.chr3.nic@ZXDC transcript3378.chr3.nic protein_coding 126474959,126472153,126471973,126470895,126466155,126461535,126458903 126476011,126472305,126472051,126471025,126466325,126462220,126459737 Gene ID= ENSG00000070476.14 TPM= 2.72 Transcript Type= NA chr3 126458902 126475868 126458902 126475868 - transcript3379.chr3.nnic@ZXDC transcript3379.chr3.nnic protein_coding 126474529,126472153,126471973,126470895,126466155,126458902 126475868,126472305,126472051,126471025,126466325,126462220 Gene ID= ENSG00000070476.14 TPM= 7.24 Transcript Type= NA chr3 126437601 126475919 126437601 126475919 - ENST00000389709.7@ZXDC ENST00000389709.7 protein_coding 126474959,126472153,126471973,126470895,126466155,126461535,126459653,126441765,126439632,126437601 126475919,126472305,126472051,126471025,126466325,126462220,126459737,126441946,126439727,126438461 Gene ID= ENSG00000070476.14 TPM= 12.68 Transcript Type= protein_coding chr3 126524283 126543291 126524283 126543291 + ENST00000319340.6@CHST13 ENST00000319340.6 protein_coding 126524283,126536271,126541733 126524429,126536353,126543291 Gene ID= ENSG00000180767.9 TPM= 1.81 Transcript Type= protein_coding chr3 126607052 126655155 126607052 126655155 - ENST00000524230.6@TXNRD3 ENST00000524230.6 protein_coding 126654748,126647236,126646111,126644297,126643981,126642032,126633909,126631764,126630712,126629379,126622464,126621742,126615355,126611037,126608499,126607052 126655155,126647296,126646220,126644401,126644053,126642151,126634051,126631879,126630937,126629471,126622540,126621898,126615462,126611132,126608633,126607973 Gene ID= ENSG00000197763.14 TPM= 16.3 Transcript Type= protein_coding chr3 126704220 126960406 126704220 126960406 + ENST00000290913.7@CHCHD6 ENST00000290913.7 protein_coding 126704220,126727078,126730561,126733078,126852647,126914680,126957416,126960196 126704399,126727186,126730630,126733222,126852730,126914750,126957551,126960406 Gene ID= ENSG00000159685.10 TPM= 21.73 Transcript Type= protein_coding chr3 126983055 127037384 126983055 127037384 + transcript3390.chr3.nnic@PLXNA1 transcript3390.chr3.nnic protein_coding 126983055,126988521,126991384,127003330,127004611,127004885,127005090,127006079,127007799,127011958,127014020,127014182,127014478,127014711,127015184,127016517,127016944,127017425,127017749,127018294,127020202,127022085,127022752,127027940,127028181,127028993,127029440,127029874,127030243,127032387,127032686,127033922 126983287,126989787,126991566,127003470,127004711,127005008,127005243,127006178,127007913,127012158,127014116,127014375,127014629,127014831,127015320,127016684,127017037,127017664,127017892,127018528,127020344,127022341,127022818,127028086,127028340,127029096,127029536,127030064,127030412,127032599,127032836,127037384 Gene ID= ENSG00000114554.11 TPM= 14.49 Transcript Type= NA chr3 127573064 127591114 127573064 127591114 - transcript3398.chr3.nic@TPRA1 transcript3398.chr3.nic protein_coding 127590883,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573064 127591114,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788 Gene ID= ENSG00000163870.14 TPM= 23.54 Transcript Type= NA chr3 127573087 127590769 127573087 127590769 - ENST00000355552.7@TPRA1 ENST00000355552.7 protein_coding 127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575749,127575403,127575185,127573087 127590769,127580163,127579872,127577076,127576893,127576696,127576050,127575809,127575505,127575265,127573788 Gene ID= ENSG00000163870.14 TPM= 85.12 Transcript Type= protein_coding chr3 127573093 127590734 127573093 127590734 - ENST00000393400.6@TPRA1 ENST00000393400.6 protein_coding 127590410,127580022,127579740,127576990,127576821,127576617,127575940,127575403,127575185,127573093 127590734,127580163,127579872,127577076,127576893,127576696,127576050,127575505,127575265,127573788 Gene ID= ENSG00000163870.14 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr3 127629181 127672809 127629181 127672809 + ENST00000342480.6@PODXL2 ENST00000342480.6 protein_coding 127629181,127639245,127660378,127662237,127668441,127669141,127671434,127672268 127629289,127639523,127661159,127662311,127668597,127669202,127671613,127672809 Gene ID= ENSG00000114631.10 TPM= 240.88 Transcript Type= protein_coding chr3 127672940 127680917 127672940 127680917 + ENST00000232744.12@ABTB1 ENST00000232744.12 protein_coding 127672940,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269 127673081,127674453,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680917 Gene ID= ENSG00000114626.17 TPM= 60.67 Transcript Type= protein_coding chr3 127672958 127680920 127672958 127680920 + ENST00000475042.5@ABTB1 ENST00000475042.5 protein_coding 127672958,127674391,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269 127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920 Gene ID= ENSG00000114626.17 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr3 127672958 127680920 127672958 127680920 + ENST00000453791.6@ABTB1 ENST00000453791.6 protein_coding 127672958,127674345,127674545,127675970,127676272,127676536,127676967,127677168,127677465,127677676,127679985,127680269 127673081,127674418,127674600,127676114,127676431,127676581,127677083,127677286,127677563,127677843,127680185,127680920 Gene ID= ENSG00000114626.17 TPM= 6.34 Transcript Type= protein_coding chr3 127689062 127822882 127689062 127822882 - ENST00000453507.6@MGLL ENST00000453507.6 protein_coding 127822309,127821694,127781789,127722430,127721053,127694975,127689062 127822882,127821838,127781895,127722566,127721163,127695190,127692323 Gene ID= ENSG00000074416.13 TPM= 6.34 Transcript Type= protein_coding chr3 127691374 127710785 127691374 127710785 - transcript3438.chr3.nnic@MGLL transcript3438.chr3.nnic protein_coding 127710576,127694975,127692966,127691374 127710785,127695190,127693201,127692323 Gene ID= ENSG00000074416.13 TPM= 1.81 Transcript Type= NA chr3 127689062 127823250 127689062 127823250 - ENST00000398104.5@MGLL ENST00000398104.5 protein_coding 127823084,127821694,127781789,127722430,127721053,127710576,127694975,127689062 127823250,127821838,127781895,127722566,127721163,127710665,127695190,127692323 Gene ID= ENSG00000074416.13 TPM= 23.54 Transcript Type= protein_coding chr3 127692117 127736357 127692117 127736357 - ENST00000398101.7@MGLL ENST00000398101.7 protein_coding 127735705,127722430,127721053,127710576,127694975,127692117 127736357,127722566,127721163,127710665,127695190,127692323 Gene ID= ENSG00000074416.13 TPM= 2.72 Transcript Type= protein_coding chr3 128052369 128071682 128052369 128071682 + ENST00000243253.7@SEC61A1 ENST00000243253.7 protein_coding 128052369,128052835,128055516,128055673,128056709,128060102,128060508,128064877,128066954,128067421,128067983,128069476 128052559,128052902,128055581,128055751,128056840,128060211,128060661,128065037,128067151,128067612,128068059,128071682 Gene ID= ENSG00000058262.9 TPM= 399.35 Transcript Type= protein_coding chr3 128080960 128123824 128080960 128123824 - ENST00000322623.9@RUVBL1 ENST00000322623.9 protein_coding 128123584,128119328,128112888,128104773,128101559,128100595,128098882,128097300,128087706,128082483,128080960 128123824,128119414,128113020,128104924,128101648,128100744,128098945,128097498,128087808,128082574,128081409 Gene ID= ENSG00000175792.11 TPM= 34.41 Transcript Type= protein_coding chr3 128153451 128408644 128153451 128408644 + transcript3455.chr3.nic@EEFSEC transcript3455.chr3.nic protein_coding 128153451,128246836,128262128,128341233,128358217,128408069 128153823,128247043,128262224,128341889,128358373,128408644 Gene ID= ENSG00000132394.10 TPM= 1.81 Transcript Type= NA chr3 128153454 128408646 128153454 128408646 + ENST00000254730.10@EEFSEC ENST00000254730.10 protein_coding 128153454,128246836,128262128,128264617,128341233,128358217,128408069 128153823,128247043,128262224,128264781,128341889,128358373,128408646 Gene ID= ENSG00000132394.10 TPM= 40.75 Transcript Type= protein_coding chr3 128479426 128487931 128479426 128487931 - transcript3458.chr3.nic@GATA2 transcript3458.chr3.nic protein_coding 128487711,128486803,128485727,128483860,128481819,128479426 128487931,128487076,128486368,128484005,128481944,128481318 Gene ID= ENSG00000179348.11 TPM= 29.88 Transcript Type= NA chr3 128619970 128650849 128619970 128650849 - ENST00000296255.7@RPN1 ENST00000296255.7 protein_coding 128650540,128644919,128637799,128631948,128629951,128626733,128625874,128625534,128622164,128619970 128650849,128644983,128638105,128632157,128630143,128626832,128626012,128625653,128622409,128620593 Gene ID= ENSG00000163902.11 TPM= 306.07 Transcript Type= protein_coding chr3 128726122 128814796 128726122 128814796 + ENST00000265062.7@RAB7A ENST00000265062.7 protein_coding 128726122,128795360,128797943,128806372,128807543,128813327 128726359,128795420,128798069,128806590,128807671,128814796 Gene ID= ENSG00000075785.12 TPM= 321.47 Transcript Type= protein_coding chr3 128879611 128913114 128879611 128913114 + ENST00000308982.11@ACAD9 ENST00000308982.11 protein_coding 128879611,128884653,128893555,128895310,128896436,128897632,128899287,128901276,128902553,128904062,128904386,128906121,128908185,128908973,128909344,128910021,128910741,128912507 128879841,128884746,128893656,128895416,128896536,128897710,128899461,128901349,128902628,128904132,128904505,128906249,128908264,128909099,128909421,128910149,128910813,128913114 Gene ID= ENSG00000177646.18 TPM= 81.5 Transcript Type= protein_coding chr3 128879620 128913100 128879620 128913100 + transcript3485.chr3.nic@ACAD9 transcript3485.chr3.nic protein_coding 128879620,128884653,128893555,128895310,128896436,128897632,128899287,128901276,128902553,128904062,128904386,128906121,128908185,128908973,128909344,128910741,128912507 128879841,128884746,128893656,128895416,128896536,128897710,128899461,128901349,128902628,128904132,128904505,128906249,128908264,128909099,128910149,128910813,128913100 Gene ID= ENSG00000177646.18 TPM= 7.24 Transcript Type= NA chr3 129001199 129040740 129001199 129040740 + transcript3493.chr3.nnic@EFCC1 transcript3493.chr3.nnic protein_coding 129001199,129003794,129030703,129032819,129034164,129036977,129038831,129039712 129002324,129004077,129030860,129032966,129034329,129037117,129038900,129040740 Gene ID= ENSG00000114654.7 TPM= 2.72 Transcript Type= NA chr3 129001629 129040742 129001629 129040742 + ENST00000436022.2@EFCC1 ENST00000436022.2 protein_coding 129001629,129003794,129030703,129032822,129034164,129036977,129038831,129039712 129002324,129004077,129030860,129032966,129034329,129037117,129038900,129040742 Gene ID= ENSG00000114654.7 TPM= 1.81 Transcript Type= protein_coding chr3 129087569 129121790 129087569 129121790 - ENST00000315150.9@RAB43 ENST00000315150.9 protein_coding 129121286,129094986,129087569 129121790,129095169,129091346 Gene ID= ENSG00000172780.16 TPM= 50.71 Transcript Type= protein_coding chr3 129087569 129122150 129087569 129122150 - ENST00000393305.5@RAB43 ENST00000393305.5 protein_coding 129122105,129121286,129094986,129087569 129122150,129121492,129095169,129091346 Gene ID= ENSG00000172780.16 TPM= 12.68 Transcript Type= protein_coding chr3 129169569 129183922 129169569 129183922 - ENST00000504813.5@CNBP ENST00000504813.5 protein_coding 129183776,129171634,129171446,129171079,129169569 129183922,129171771,129171508,129171277,129170570 Gene ID= ENSG00000169714.16 TPM= 24.45 Transcript Type= protein_coding chr3 129169569 129183910 129169569 129183910 - ENST00000500450.6@CNBP ENST00000500450.6 protein_coding 129183776,129171655,129171446,129171079,129169569 129183910,129171771,129171508,129171277,129170570 Gene ID= ENSG00000169714.16 TPM= 4.53 Transcript Type= protein_coding chr3 129249606 129277773 129249606 129277773 + ENST00000314797.10@COPG1 ENST00000314797.10 protein_coding 129249606,129250682,129252281,129252623,129252876,129254668,129254985,129256068,129257470,129257727,129260333,129260619,129263904,129265549,129267024,129267937,129268495,129268932,129271767,129272244,129272807,129274838,129275194,129277294 129249746,129250734,129252361,129252694,129252955,129254743,129255077,129256154,129257627,129257860,129260400,129260807,129263999,129265792,129267099,129268040,129268620,129269000,129271909,129272415,129272904,129274976,129275292,129277773 Gene ID= ENSG00000181789.14 TPM= 291.13 Transcript Type= protein_coding chr3 129278956 129306183 129278956 129306183 + transcript3539.chr3.nic@HMCES transcript3539.chr3.nic protein_coding 129278956,129279710,129288854,129298354,129301950,129304589 129279203,129279915,129288997,129298535,129302142,129306183 Gene ID= ENSG00000183624.13 TPM= 3.62 Transcript Type= NA chr3 129278840 129306186 129278840 129306186 + ENST00000383463.8@HMCES ENST00000383463.8 protein_coding 129278840,129279710,129288854,129290679,129298354,129301950,129304589 129278905,129279915,129288997,129290804,129298535,129302142,129306186 Gene ID= ENSG00000183624.13 TPM= 35.32 Transcript Type= protein_coding chr3 129278846 129305293 129278846 129305293 + ENST00000417226.6@HMCES ENST00000417226.6 protein_coding 129278846,129279710,129288854,129298354,129301950,129304589 129278905,129279915,129288997,129298535,129302142,129305293 Gene ID= ENSG00000183624.13 TPM= 2.72 Transcript Type= protein_coding chr3 129278974 129305262 129278974 129305262 + ENST00000389735.7@HMCES ENST00000389735.7 protein_coding 129278974,129279710,129288854,129290679,129298354,129301950,129304589 129279211,129279915,129288997,129290804,129298535,129302142,129305262 Gene ID= ENSG00000183624.13 TPM= 1.81 Transcript Type= protein_coding chr3 129391157 129399439 129391157 129399439 - transcript3545.chr3.nic@RPL32P3 transcript3545.chr3.nic transcribed_unprocessed_pseudogene 129399008,129397040,129396217,129393635,129391157 129399439,129397140,129396420,129393795,129393296 Gene ID= ENSG00000251474.6 TPM= 2.72 Transcript Type= NA chr3 129430956 129440060 129430956 129440060 - transcript3554.chr3.nic@MBD4 transcript3554.chr3.nic protein_coding 129439730,129437720,129436461,129434062,129433850,129433098,129430956 129440060,129437950,129437308,129434136,129433984,129433247,129432606 Gene ID= ENSG00000129071.9 TPM= 1.81 Transcript Type= NA chr3 129431279 129439975 129431279 129439975 - transcript3555.chr3.nic@MBD4 transcript3555.chr3.nic protein_coding 129439730,129436461,129434062,129433850,129433098,129431279 129439975,129437950,129434136,129433984,129433247,129432606 Gene ID= ENSG00000129071.9 TPM= 1.81 Transcript Type= NA chr3 129430944 129440029 129430944 129440029 - ENST00000429544.6@MBD4 ENST00000429544.6 protein_coding 129439730,129437720,129436461,129434062,129433850,129433098,129432503,129430944 129440029,129437950,129437308,129434136,129433984,129433247,129432606,129431578 Gene ID= ENSG00000129071.9 TPM= 34.41 Transcript Type= protein_coding chr3 129431266 129440007 129431266 129440007 - ENST00000503197.5@MBD4 ENST00000503197.5 protein_coding 129439730,129437720,129436443,129434062,129433850,129433098,129432556,129431266 129440007,129437950,129437308,129434136,129433984,129433247,129432606,129431578 Gene ID= ENSG00000129071.9 TPM= 2.72 Transcript Type= protein_coding chr3 129440085 129520355 129440085 129520355 + transcript3558.chr3.nic@IFT122 transcript3558.chr3.nic protein_coding 129440085,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507665,129512312,129514389,129515488,129517469,129519107,129519568,129520176 129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520355 Gene ID= ENSG00000163913.11 TPM= 14.04 Transcript Type= NA chr3 129440166 129520347 129440166 129520347 + transcript3563.chr3.nic@IFT122 transcript3563.chr3.nic protein_coding 129440166,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129495446,129499902,129502711,129504319,129506409,129507665,129512312,129514389,129515488,129517469,129519107,129519568,129520176 129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520347 Gene ID= ENSG00000163913.11 TPM= 2.26 Transcript Type= NA chr3 129440085 129520483 129440085 129520483 + transcript3566.chr3.nic@IFT122 transcript3566.chr3.nic protein_coding 129440085,129449871,129451914,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176 129440371,129449937,129451998,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520483 Gene ID= ENSG00000163913.11 TPM= 2.11 Transcript Type= NA chr3 129440125 129520351 129440125 129520351 + ENST00000347300.6@IFT122 ENST00000347300.6 protein_coding 129440125,129449871,129451914,129458599,129461228,129463560,129464635,129469342,129476315,129476663,129478016,129479785,129481530,129483485,129488257,129492141,129495446,129499902,129502711,129504319,129506409,129507668,129512312,129514389,129515488,129517469,129519107,129519568,129520176 129440371,129449937,129451998,129458677,129461304,129463626,129464781,129469417,129476506,129476801,129478218,129479922,129481694,129483682,129488397,129492194,129495607,129500068,129502882,129504421,129506549,129507762,129512412,129514554,129515599,129517594,129519186,129519732,129520351 Gene ID= ENSG00000163913.11 TPM= 36.52 Transcript Type= protein_coding chr3 129555175 129606818 129555175 129606818 - ENST00000324093.8@PLXND1 ENST00000324093.8 protein_coding 129605329,129589351,129586588,129586172,129585952,129584385,129584125,129583567,129578329,129575766,129575469,129574336,129573594,129572842,129572609,129571677,129571509,129571040,129570786,129569843,129567698,129567492,129566527,129565887,129565340,129563094,129562787,129561800,129561646,129560689,129560330,129559620,129558428,129557083,129556617,129555175 129606818,129589527,129586719,129586272,129586081,129584562,129584233,129583669,129578433,129575855,129575562,129574490,129573745,129572941,129572748,129571844,129571599,129571303,129570935,129569957,129567805,129567604,129566631,129566017,129565538,129563240,129562943,129561903,129561709,129560723,129560434,129559783,129558575,129557223,129556691,129556428 Gene ID= ENSG00000004399.12 TPM= 9.96 Transcript Type= protein_coding chr3 129555215 129560614 129555215 129560614 - transcript3577.chr3.nic@PLXND1 transcript3577.chr3.nic protein_coding 129560330,129559620,129558428,129557083,129556617,129555215 129560614,129559783,129558575,129557223,129556691,129556428 Gene ID= ENSG00000004399.12 TPM= 8.15 Transcript Type= NA chr3 129647794 129893734 129647794 129893734 - transcript3585.chr3.nic@TMCC1 transcript3585.chr3.nic protein_coding 129893494,129880309,129832774,129827803,129670330,129654968,129647794 129893734,129880559,129832826,129828508,129671264,129655103,129651795 Gene ID= ENSG00000172765.16 TPM= 7.54 Transcript Type= NA chr3 129647792 129688732 129647792 129688732 - ENST00000432054.6@TMCC1 ENST00000432054.6 protein_coding 129688177,129670330,129654968,129647792 129688732,129671264,129655103,129651795 Gene ID= ENSG00000172765.16 TPM= 3.02 Transcript Type= protein_coding chr3 129647794 129724118 129647794 129724118 - transcript3590.chr3.nnic@TMCC1 transcript3590.chr3.nnic protein_coding 129723964,129670330,129654968,129647794 129724118,129671264,129655103,129651795 Gene ID= ENSG00000172765.16 TPM= 10.26 Transcript Type= NA chr3 129847052 129893734 129847052 129893734 - transcript3593.chr3.nnic@TMCC1 transcript3593.chr3.nnic protein_coding 129893494,129880309,129847052 129893734,129880559,129848412 Gene ID= ENSG00000172765.16 TPM= 3.62 Transcript Type= NA chr3 130678935 130746829 130678935 130746829 - ENST00000356763.7@PIK3R4 ENST00000356763.7 protein_coding 130746318,130744486,130735869,130733548,130730308,130728463,130723414,130718389,130716396,130708291,130706948,130705561,130703723,130690490,130686211,130684250,130681491,130680977,130680613,130678935 130746829,130745264,130736002,130734130,130730442,130728684,130723587,130718534,130716599,130708492,130707135,130705771,130703888,130690654,130686422,130684381,130681591,130681065,130680721,130679485 Gene ID= ENSG00000196455.7 TPM= 11.77 Transcript Type= protein_coding chr3 130893949 131016717 130893949 131016717 + transcript3599.chr3.nic@ATP2C1 transcript3599.chr3.nic protein_coding 130893949,130894708,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152 130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016717 Gene ID= ENSG00000017260.19 TPM= 2.94 Transcript Type= NA chr3 130893960 131016717 130893960 131016717 + transcript3602.chr3.nic@ATP2C1 transcript3602.chr3.nic protein_coding 130893960,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152 130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016717 Gene ID= ENSG00000017260.19 TPM= 16.53 Transcript Type= NA chr3 130893976 131016717 130893976 131016717 + transcript3610.chr3.nic@ATP2C1 transcript3610.chr3.nic protein_coding 130893976,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152 130894337,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016717 Gene ID= ENSG00000017260.19 TPM= 9.28 Transcript Type= NA chr3 130893968 131003107 130893968 131003107 + ENST00000510168.5@ATP2C1 ENST00000510168.5 protein_coding 130893968,130894590,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220 130894337,130894775,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003107 Gene ID= ENSG00000017260.19 TPM= 38.94 Transcript Type= protein_coding chr3 130894178 131003150 130894178 131003150 + ENST00000504948.5@ATP2C1 ENST00000504948.5 protein_coding 130894178,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220 130894337,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131003150 Gene ID= ENSG00000017260.19 TPM= 18.11 Transcript Type= protein_coding chr3 130894178 131016712 130894178 131016712 + ENST00000513801.5@ATP2C1 ENST00000513801.5 protein_coding 130894178,130930416,130932022,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152 130894337,130930526,130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001314,131016712 Gene ID= ENSG00000017260.19 TPM= 5.43 Transcript Type= protein_coding chr3 130932044 131016684 130932044 131016684 + ENST00000504612.5@ATP2C1 ENST00000504612.5 protein_coding 130932044,130934622,130937428,130940630,130941591,130953821,130955012,130956104,130959275,130963971,130964948,130967145,130967330,130969292,130975332,130979249,130980582,130992951,130993932,130996043,130996680,130997606,130998294,130999518,131001220,131016152 130932138,130934711,130937463,130940691,130941699,130953976,130955080,130956179,130959341,130964095,130965045,130967240,130967419,130969396,130975488,130979419,130980679,130993001,130994098,130996111,130996796,130997753,130998389,130999659,131001344,131016684 Gene ID= ENSG00000017260.19 TPM= 1.13 Transcript Type= protein_coding chr3 131013875 131026802 131013875 131026802 - ENST00000264992.7@ASTE1 ENST00000264992.7 protein_coding 131026507,131025474,131024005,131018506,131016144,131013875 131026802,131025594,131025331,131018716,131016339,131014387 Gene ID= ENSG00000034533.11 TPM= 8.15 Transcript Type= protein_coding chr3 131026851 131350467 131026851 131350467 + transcript3624.chr3.nnic@NEK11 transcript3624.chr3.nnic protein_coding 131026851,131029613,131080423,131097610,131109803,131132745,131133830,131152388,131152631,131155036,131162408,131165426,131168830,131170773,131228528,131243436,131273478,131349557 131027006,131029878,131080588,131097735,131109921,131132809,131133956,131152537,131152709,131155121,131162527,131165519,131168937,131170887,131228688,131243496,131273574,131350467 Gene ID= ENSG00000114670.13 TPM= 2.94 Transcript Type= NA chr3 131026851 131350467 131026851 131350467 + transcript3627.chr3.nic@NEK11 transcript3627.chr3.nic protein_coding 131026851,131029613,131080423,131109803,131132745,131133830,131152388,131152631,131155036,131162408,131165426,131168830,131170773,131228528,131243436,131273478,131349557 131027006,131029878,131080588,131109921,131132809,131133956,131152537,131152709,131155121,131162527,131165519,131168937,131170887,131228688,131243496,131273574,131350467 Gene ID= ENSG00000114670.13 TPM= 5.66 Transcript Type= NA chr3 131026851 131350467 131026851 131350467 + transcript3629.chr3.nnic@NEK11 transcript3629.chr3.nnic protein_coding 131026851,131029613,131080423,131109803,131132745,131133830,131152631,131155036,131162408,131165426,131168830,131170773,131228528,131243436,131273478,131349557 131027006,131029878,131080588,131109921,131132809,131133956,131152709,131155121,131162527,131165519,131168937,131170887,131228688,131243496,131273574,131350467 Gene ID= ENSG00000114670.13 TPM= 2.04 Transcript Type= NA chr3 131026883 131350459 131026883 131350459 + ENST00000383366.8@NEK11 ENST00000383366.8 protein_coding 131026883,131027930,131029613,131080423,131109803,131132745,131133830,131152388,131152631,131155036,131162408,131165426,131168830,131170773,131228528,131243436,131273478,131349557 131027006,131028002,131029878,131080588,131109921,131132809,131133956,131152537,131152709,131155121,131162527,131165519,131168937,131170887,131228688,131243496,131273574,131350459 Gene ID= ENSG00000114670.13 TPM= 3.85 Transcript Type= protein_coding chr3 131381774 131388830 131381774 131388830 + ENST00000521288.1@NUDT16 ENST00000521288.1 protein_coding 131381774,131382046,131383162 131381942,131382315,131388830 Gene ID= ENSG00000198585.11 TPM= 28.07 Transcript Type= protein_coding chr3 131381785 131383439 131381785 131383439 + ENST00000502852.1@NUDT16 ENST00000502852.1 protein_coding 131381785,131382046 131381942,131383439 Gene ID= ENSG00000198585.11 TPM= 1.81 Transcript Type= protein_coding chr3 131462212 131502969 131462212 131502969 - ENST00000264995.7@MRPL3 ENST00000264995.7 protein_coding 131502730,131501531,131500430,131498179,131489981,131487680,131471171,131469696,131468091,131462212 131502969,131501715,131500521,131498277,131490080,131487740,131471279,131469773,131468168,131462875 Gene ID= ENSG00000114686.8 TPM= 64.29 Transcript Type= protein_coding chr3 132317367 132358752 132317367 132358752 + ENST00000336375.9@ACPP ENST00000336375.9 protein_coding 132317367,132328267,132331647,132332192,132337456,132342552,132344927,132349920,132352720,132356686 132317576,132328362,132331733,132332344,132337554,132342644,132345059,132350002,132352823,132358752 Gene ID= ENSG00000014257.15 TPM= 3.62 Transcript Type= protein_coding chr3 132317407 132368298 132317407 132368298 + ENST00000351273.11@ACPP ENST00000351273.11 protein_coding 132317407,132328267,132331647,132332192,132337456,132342552,132344927,132349920,132352720,132356686,132367704 132317576,132328362,132331733,132332344,132337554,132342644,132345059,132350002,132352823,132356855,132368298 Gene ID= ENSG00000014257.15 TPM= 1.81 Transcript Type= protein_coding chr3 132417526 132539032 132417526 132539032 + ENST00000260818.10@DNAJC13 ENST00000260818.10 protein_coding 132417526,132434538,132446475,132447321,132447898,132450647,132453298,132453599,132454066,132456235,132456501,132456663,132457269,132460250,132461050,132462467,132463696,132465995,132466299,132467170,132473145,132474932,132477789,132477981,132479227,132480369,132482226,132483375,132484588,132488298,132488976,132490897,132492414,132494144,132495088,132496528,132499126,132499734,132500794,132502289,132503214,132505302,132507237,132511067,132513008,132514571,132516422,132516704,132522828,132523157,132523540,132525610,132526141,132528189,132530998,132538176 132417760,132434618,132446550,132447470,132447939,132450847,132453504,132453694,132454157,132456401,132456580,132456832,132457368,132460357,132461205,132462523,132463817,132466070,132466394,132467313,132473227,132475085,132477892,132478140,132479289,132480470,132482330,132483577,132484672,132488452,132489021,132491051,132492615,132494259,132495166,132496663,132499310,132499808,132500913,132502468,132503381,132505415,132507353,132511244,132513099,132514670,132516496,132516816,132522997,132523199,132523713,132525789,132526281,132528332,132531097,132539032 Gene ID= ENSG00000138246.15 TPM= 14.49 Transcript Type= protein_coding chr3 132558140 132660104 132558140 132660104 - transcript3652.chr3.nnic@ACAD11 transcript3652.chr3.nnic protein_coding 132659603,132644797,132642677,132641972,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132606867,132605098,132603229,132578796,132576944,132575772,132561101,132559833,132558140 132660104,132644896,132642802,132642133,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132607025,132605205,132603327,132579558,132577015,132575926,132561217,132559942,132559085 Gene ID= ENSG00000240303.7 TPM= 1.81 Transcript Type= NA chr3 132558140 132659809 132558140 132659809 - transcript3653.chr3.nnic@ACAD11 transcript3653.chr3.nnic protein_coding 132659603,132644797,132642677,132641972,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132605098,132603229,132579492,132578796,132576944,132575856,132561101,132559833,132558140 132659809,132644896,132642802,132642133,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132578881,132577015,132575926,132561217,132559942,132559085 Gene ID= ENSG00000240303.7 TPM= 1.81 Transcript Type= NA chr3 132558140 132660712 132558140 132660712 - transcript3655.chr3.nnic@ACAD11 transcript3655.chr3.nnic protein_coding 132659603,132644797,132642677,132641972,132639492,132631341,132628340,132626691,132619468,132618634,132605098,132603229,132578796,132576944,132575772,132561101,132559833,132558140 132660712,132644896,132642802,132642133,132639656,132631479,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132577015,132575926,132561217,132559942,132559085 Gene ID= ENSG00000240303.7 TPM= 1.81 Transcript Type= NA chr3 132558140 132660292 132558140 132660292 - transcript3657.chr3.nnic@ACAD11 transcript3657.chr3.nnic protein_coding 132659603,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132605098,132603229,132578796,132576944,132575772,132561101,132559833,132558140 132660292,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132577015,132575926,132561217,132559942,132559085 Gene ID= ENSG00000240303.7 TPM= 1.81 Transcript Type= NA chr3 132558138 132659649 132558138 132659649 - ENST00000496418.5@ACAD11 ENST00000496418.5 protein_coding 132659603,132644797,132642677,132641972,132639492,132631341,132630437,132628340,132626691,132619468,132618634,132605098,132603229,132578796,132576944,132575772,132561101,132559833,132558138 132659649,132644896,132642802,132642133,132639656,132631479,132630558,132628446,132626817,132619545,132618772,132605205,132603327,132579558,132577015,132575926,132561217,132559942,132559085 Gene ID= ENSG00000240303.7 TPM= 3.62 Transcript Type= retained_intron chr3 132717777 132722428 132717777 132722428 - transcript3667.chr3.nic@NPHP3-ACAD11 transcript3667.chr3.nic protein_coding 132721963,132719705,132717777 132722428,132719830,132719144 Gene ID= ENSG00000274810.4 TPM= 5.43 Transcript Type= NA chr3 132680599 132722452 132680599 132722452 - transcript3665.chr3.nic@NPHP3 transcript3665.chr3.nic protein_coding 132721963,132719705,132718994,132716757,132715085,132713126,132708101,132705740,132704198,132701430,132700334,132699918,132697260,132694827,132692654,132691192,132690528,132689074,132688650,132687151,132686260,132684554,132683399,132682703,132680599 132722452,132719830,132719144,132716909,132715218,132713286,132708257,132705814,132704371,132701533,132700448,132700061,132697362,132694965,132692818,132691286,132690650,132689263,132688891,132687226,132686387,132684794,132683524,132682818,132682090 Gene ID= ENSG00000113971.19 TPM= 2.72 Transcript Type= NA chr3 132717549 132722525 132717549 132722525 - transcript3666.chr3.nic@NPHP3 transcript3666.chr3.nic protein_coding 132721963,132719705,132718994,132717549 132722525,132719830,132719144,132718117 Gene ID= ENSG00000113971.19 TPM= 2.72 Transcript Type= NA chr3 133038347 133396214 133038347 133396214 + transcript3671.chr3.nnic@TMEM108 transcript3671.chr3.nnic protein_coding 133038347,133045902,133229266,133363437,133379752,133390180,133395864 133038435,133046020,133229351,133363548,133381161,133390334,133396214 Gene ID= ENSG00000144868.13 TPM= 6.79 Transcript Type= NA chr3 133038391 133397792 133038391 133397792 + ENST00000321871.10@TMEM108 ENST00000321871.10 protein_coding 133038391,133045902,133229266,133379752,133390180,133395864 133038435,133046020,133229351,133381161,133390334,133397792 Gene ID= ENSG00000144868.13 TPM= 20.37 Transcript Type= protein_coding chr3 133573565 133590260 133573565 133590260 + transcript3679.chr3.nic@CDV3 transcript3679.chr3.nic protein_coding 133573565,133575039,133584002,133586563,133588353 133574284,133575115,133584150,133586722,133590260 Gene ID= ENSG00000091527.15 TPM= 12.07 Transcript Type= NA chr3 133573730 133590261 133573730 133590261 + ENST00000264993.7@CDV3 ENST00000264993.7 protein_coding 133573730,133575039,133584002,133586563,133587896 133574284,133575115,133584150,133586722,133590261 Gene ID= ENSG00000091527.15 TPM= 16.6 Transcript Type= protein_coding chr3 133574457 133590260 133574457 133590260 + ENST00000420115.6@CDV3 ENST00000420115.6 protein_coding 133574457,133575039,133584002,133586563,133587162 133574592,133575115,133584150,133586722,133590260 Gene ID= ENSG00000091527.15 TPM= 4.83 Transcript Type= protein_coding chr3 133805777 133821489 133805777 133821489 + transcript3690.chr3.nnic@SRPRB transcript3690.chr3.nnic protein_coding 133805777,133806609,133807746,133811117,133815590,133816878,133819553,133821171 133806002,133806703,133807823,133811199,133815726,133816932,133819820,133821489 Gene ID= ENSG00000144867.11 TPM= 1.81 Transcript Type= NA chr3 133805777 133826454 133805777 133826454 + transcript3691.chr3.nic@SRPRB transcript3691.chr3.nic protein_coding 133805777,133806609,133807746,133811117,133815590,133816878,133819553,133825392 133806002,133806703,133807823,133811199,133815726,133816932,133819820,133826454 Gene ID= ENSG00000144867.11 TPM= 3.62 Transcript Type= NA chr3 133784033 133821492 133784033 133821492 + ENST00000466490.6@SRPRB ENST00000466490.6 protein_coding 133784033,133805676,133806609,133807746,133811117,133815590,133816878,133819553 133784144,133806002,133806703,133807823,133811199,133815726,133816932,133821492 Gene ID= ENSG00000144867.11 TPM= 69.73 Transcript Type= protein_coding chr3 133932696 134030076 133932696 134030076 - ENST00000310926.8@SLCO2A1 ENST00000310926.8 protein_coding 134029707,133979481,133973663,133954966,133953663,133951208,133948893,133948536,133947256,133945095,133942605,133938429,133935774,133932696 134030076,133979618,133973825,133955193,133953761,133951344,133948971,133948700,133947445,133945260,133942768,133938493,133935897,133934830 Gene ID= ENSG00000174640.12 TPM= 77.88 Transcript Type= protein_coding chr3 134157134 134250881 134157134 134250881 - transcript3701.chr3.nnic@RYK transcript3701.chr3.nnic protein_coding 134250690,134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157134 134250881,134250580,134222539,134211607,134209829,134207525,134202874,134195182,134191974,134188923,134183071,134178073,134176039,134175768,134159373,134158264 Gene ID= ENSG00000163785.12 TPM= 3.4 Transcript Type= NA chr3 134157134 134250744 134157134 134250744 - ENST00000620660.4@RYK ENST00000620660.4 protein_coding 134250423,134222418,134211508,134209695,134207472,134202730,134195082,134191849,134188837,134183002,134177941,134175930,134175609,134159237,134157134 134250744,134222539,134211607,134209829,134207525,134202874,134195182,134191983,134188923,134183071,134178073,134176039,134175768,134159373,134158264 Gene ID= ENSG00000163785.12 TPM= 3.1 Transcript Type= protein_coding chr3 134355877 134374447 134355877 134374447 - ENST00000422605.6@AMOTL2 ENST00000422605.6 protein_coding 134374342,134370700,134367497,134366283,134365817,134361512,134360106,134359283,134358540,134355877 134374447,134371494,134367803,134366427,134365909,134361807,134360413,134359503,134358716,134357763 Gene ID= ENSG00000114019.14 TPM= 32.6 Transcript Type= protein_coding chr3 134477708 134486026 134477708 134486026 - ENST00000354910.9@ANAPC13 ENST00000354910.9 protein_coding 134485952,134482806,134477708 134486026,134482931,134478715 Gene ID= ENSG00000129055.12 TPM= 71.84 Transcript Type= protein_coding chr3 134477706 134486023 134477706 134486023 - ENST00000510994.5@ANAPC13 ENST00000510994.5 protein_coding 134485320,134482806,134477706 134486023,134482931,134478715 Gene ID= ENSG00000129055.12 TPM= 18.41 Transcript Type= protein_coding chr3 134477711 134485989 134477711 134485989 - ENST00000514612.5@ANAPC13 ENST00000514612.5 protein_coding 134485701,134482806,134477711 134485989,134482931,134478715 Gene ID= ENSG00000129055.12 TPM= 3.02 Transcript Type= protein_coding chr3 134485714 134561766 134485714 134561766 + transcript3717.chr3.nic@CEP63 transcript3717.chr3.nic protein_coding 134485714,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134547335,134549062,134550063,134551926,134561377 134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134547472,134549176,134550260,134552012,134561766 Gene ID= ENSG00000182923.16 TPM= 3.62 Transcript Type= NA chr3 134486173 134561766 134486173 134561766 + transcript3719.chr3.nic@CEP63 transcript3719.chr3.nic protein_coding 134486173,134488019,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377 134486556,134488090,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561766 Gene ID= ENSG00000182923.16 TPM= 2.72 Transcript Type= NA chr3 134486173 134561908 134486173 134561908 + transcript3728.chr3.nic@CEP63 transcript3728.chr3.nic protein_coding 134486173,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377 134486556,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561908 Gene ID= ENSG00000182923.16 TPM= 3.62 Transcript Type= NA chr3 134486173 134575017 134486173 134575017 + transcript3729.chr3.nic@CEP63 transcript3729.chr3.nic protein_coding 134486173,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134574793 134486556,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134575017 Gene ID= ENSG00000182923.16 TPM= 2.72 Transcript Type= NA chr3 134485743 134561768 134485743 134561768 + ENST00000332047.9@CEP63 ENST00000332047.9 protein_coding 134485743,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134561377 134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134561768 Gene ID= ENSG00000182923.16 TPM= 4.53 Transcript Type= protein_coding chr3 134485791 134575011 134485791 134575011 + ENST00000354446.7@CEP63 ENST00000354446.7 protein_coding 134485791,134495296,134507109,134531845,134532778,134537155,134545586,134546149,134549062,134550063,134551926,134574793 134486052,134495364,134507286,134531940,134532900,134537268,134545819,134546288,134549176,134550260,134552012,134575011 Gene ID= ENSG00000182923.16 TPM= 2.72 Transcript Type= protein_coding chr3 134607002 134651045 134607002 134651045 - transcript3741.chr3.nic@KY transcript3741.chr3.nic protein_coding 134650825,134647435,134643316,134629621,134627756,134625053,134620749,134619148,134610195,134607002 134651045,134647497,134643378,134629695,134627818,134625135,134620857,134619265,134610383,134608839 Gene ID= ENSG00000174611.11 TPM= 2.72 Transcript Type= NA chr3 134607002 134651023 134607002 134651023 - transcript3742.chr3.nic@KY transcript3742.chr3.nic protein_coding 134650825,134647435,134629621,134627756,134625053,134620749,134619148,134610195,134607002 134651023,134647497,134629695,134627818,134625135,134620857,134619265,134610383,134608839 Gene ID= ENSG00000174611.11 TPM= 1.81 Transcript Type= NA chr3 135965673 136147891 135965673 136147891 + ENST00000264977.7@PPP2R3A ENST00000264977.7 protein_coding 135965673,136001059,136026832,136040859,136049259,136070478,136078367,136082265,136087883,136090578,136102007,136103258,136106216,136145043 135965849,136003493,136027098,136040962,136049361,136070552,136078453,136082421,136087931,136090667,136102182,136103376,136106322,136147891 Gene ID= ENSG00000073711.10 TPM= 5.43 Transcript Type= protein_coding chr3 136250306 136330169 136250306 136330169 + ENST00000251654.8@PCCB ENST00000251654.8 protein_coding 136250306,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905 136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330169 Gene ID= ENSG00000114054.13 TPM= 271.36 Transcript Type= protein_coding chr3 136250355 136330169 136250355 136330169 + ENST00000466072.5@PCCB ENST00000466072.5 protein_coding 136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326326,136326803,136327155,136327634,136328758,136329905 136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326385,136326910,136327255,136327732,136328857,136330169 Gene ID= ENSG00000114054.13 TPM= 8.3 Transcript Type= protein_coding chr3 136250359 136330170 136250359 136330170 + ENST00000469217.5@PCCB ENST00000469217.5 protein_coding 136250359,136255856,136256555,136259176,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327155,136327634,136328758,136329905 136250558,136255975,136256623,136259235,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327255,136327732,136328857,136330170 Gene ID= ENSG00000114054.13 TPM= 11.47 Transcript Type= protein_coding chr3 136250355 136330169 136250355 136330169 + ENST00000484181.5@PCCB ENST00000484181.5 protein_coding 136250355,136255856,136256555,136260479,136261952,136283837,136293756,136297952,136301030,136316941,136326803,136327634,136328758,136329905 136250558,136255975,136256623,136260535,136262065,136283947,136293864,136298072,136301111,136317064,136326910,136327732,136328857,136330169 Gene ID= ENSG00000114054.13 TPM= 6.49 Transcript Type= nonsense_mediated_decay chr3 136336233 136752368 136336233 136752368 - ENST00000383202.6@STAG1 ENST00000383202.6 protein_coding 136752195,136630870,136623146,136604309,136568765,136542119,136521213,136502628,136500223,136477289,136473539,136472413,136464881,136452033,136443287,136433556,136422952,136422768,136422410,136421093,136417885,136398749,136377660,136369108,136366943,136363366,136359148,136357720,136349158,136343832,136341441,136340491,136338370,136336233 136752368,136630981,136623248,136604473,136568861,136542195,136521417,136502779,136500296,136477412,136473637,136472492,136464988,136452147,136443404,136433659,136423044,136422857,136422613,136421163,136417972,136398829,136377752,136369282,136367082,136363467,136359296,136357848,136349363,136344006,136341551,136340605,136338450,136338277 Gene ID= ENSG00000118007.12 TPM= 14.49 Transcript Type= protein_coding chr3 136819019 136855892 136819019 136855892 + ENST00000446465.2@SLC35G2 ENST00000446465.2 protein_coding 136819019,136854443 136819628,136855892 Gene ID= ENSG00000168917.8 TPM= 19.02 Transcript Type= protein_coding chr3 136819084 136855888 136819084 136855888 + ENST00000393079.3@SLC35G2 ENST00000393079.3 protein_coding 136819084,136854443 136819214,136855888 Gene ID= ENSG00000168917.8 TPM= 12.68 Transcript Type= protein_coding chr3 136862208 136949126 136862208 136949126 + ENST00000288986.6@NCK1 ENST00000288986.6 protein_coding 136862208,136927984,136945583,136948259 136862319,136928227,136946295,136949126 Gene ID= ENSG00000158092.6 TPM= 9.06 Transcript Type= protein_coding chr3 138061985 138115652 138061985 138115652 - transcript3774.chr3.nic@DZIP1L transcript3774.chr3.nic protein_coding 138115328,138112364,138103471,138097763,138094862,138092383,138088379,138086961,138084113,138081734,138080567,138077499,138071643,138068151,138067531,138064628,138061985 138115652,138112500,138104052,138097847,138094983,138092544,138088507,138087023,138084253,138081764,138080620,138077632,138071835,138068367,138067700,138064767,138062977 Gene ID= ENSG00000158163.14 TPM= 1.81 Transcript Type= NA chr3 138161012 138174949 138161012 138174949 - ENST00000260803.8@DBR1 ENST00000260803.8 protein_coding 138174599,138173502,138171633,138170107,138167081,138163778,138163349,138161012 138174949,138173626,138171713,138170192,138167305,138163858,138163494,138162582 Gene ID= ENSG00000138231.12 TPM= 13.58 Transcript Type= protein_coding chr3 138187284 138298389 138187284 138298389 + ENST00000469044.5@ARMC8 ENST00000469044.5 protein_coding 138187284,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859 138187599,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138298389 Gene ID= ENSG00000114098.17 TPM= 17.66 Transcript Type= protein_coding chr3 138187320 138298384 138187320 138298384 + transcript3794.chr3.nic@ARMC8 transcript3794.chr3.nic protein_coding 138187320,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088,138263739,138264131,138267155,138270040,138272967,138274449,138284431,138289048,138290546,138295859 138187599,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245183,138263821,138264212,138267241,138270132,138273116,138274544,138284526,138289120,138290639,138298384 Gene ID= ENSG00000114098.17 TPM= 9.51 Transcript Type= NA chr3 138187531 138245681 138187531 138245681 + ENST00000470821.5@ARMC8 ENST00000470821.5 protein_coding 138187531,138209817,138221926,138223389,138223636,138228918,138235034,138237309,138237482,138239468,138241783,138245088 138187599,138209893,138221997,138223531,138223733,138229010,138235114,138237384,138237572,138239528,138241983,138245681 Gene ID= ENSG00000114098.17 TPM= 4.53 Transcript Type= protein_coding chr3 138348610 138405535 138348610 138405535 + transcript3803.chr3.nnic@MRAS transcript3803.chr3.nnic protein_coding 138348610,138372866,138397324,138398469,138399712,138400534,138402170 138348767,138373076,138397477,138398568,138399796,138400613,138405535 Gene ID= ENSG00000158186.12 TPM= 18.11 Transcript Type= NA chr3 138347697 138405533 138347697 138405533 + ENST00000289104.8@MRAS ENST00000289104.8 protein_coding 138347697,138372866,138397324,138398469,138400534,138402170 138348325,138373076,138397477,138398568,138400613,138405533 Gene ID= ENSG00000158186.12 TPM= 22.19 Transcript Type= protein_coding chr3 138348667 138405535 138348667 138405535 + transcript3806.chr3.nic@MRAS transcript3806.chr3.nic protein_coding 138348667,138372866,138397324,138398469,138400534,138402170 138349032,138373076,138397477,138398568,138400613,138405535 Gene ID= ENSG00000158186.12 TPM= 29.43 Transcript Type= NA chr3 138494344 138594356 138494344 138594356 - ENST00000264982.7@CEP70 ENST00000264982.7 protein_coding 138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138500110,138498031,138494344 138594356,138591956,138572932,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224,138498110,138495076 Gene ID= ENSG00000114107.8 TPM= 9.06 Transcript Type= protein_coding chr3 138536021 138594273 138536021 138594273 - transcript3824.chr3.nic@CEP70 transcript3824.chr3.nic protein_coding 138594198,138591854,138572859,138571266,138571034,138570318,138536021 138594273,138591956,138572932,138571356,138571157,138570498,138537347 Gene ID= ENSG00000114107.8 TPM= 2.72 Transcript Type= NA chr3 138499884 138594248 138499884 138594248 - ENST00000481834.5@CEP70 ENST00000481834.5 protein_coding 138594198,138591854,138572859,138571266,138571034,138570318,138537178,138532514,138529375,138529199,138525490,138508439,138505295,138500735,138500399,138499884 138594248,138591956,138572932,138571356,138571157,138570498,138537347,138532570,138529462,138529287,138525564,138508544,138505465,138500881,138500567,138500224 Gene ID= ENSG00000114107.8 TPM= 1.81 Transcript Type= protein_coding chr3 138609072 138633369 138609072 138633369 + ENST00000393034.6@FAIM ENST00000393034.6 protein_coding 138609072,138621407,138622188,138629107,138632930 138609146,138621539,138622416,138629156,138633369 Gene ID= ENSG00000158234.12 TPM= 1.81 Transcript Type= protein_coding chr3 138654017 138834968 138654017 138834968 - transcript3832.chr3.nic@PIK3CB transcript3832.chr3.nic protein_coding 138834695,138796463,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654017 138834968,138796567,138759359,138755979,138742781,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526 Gene ID= ENSG00000051382.8 TPM= 23.09 Transcript Type= NA chr3 138654068 138834917 138654068 138834917 - ENST00000462898.5@PIK3CB ENST00000462898.5 protein_coding 138834695,138759173,138755754,138742558,138737707,138734634,138733361,138714468,138712208,138707159,138704443,138698907,138694786,138691000,138688875,138684625,138683678,138681967,138665036,138663906,138657690,138656142,138654068 138834917,138759359,138755979,138742755,138737886,138734804,138733438,138714719,138712304,138707289,138704493,138699095,138694907,138691143,138688974,138684803,138683787,138682045,138665203,138664029,138657835,138656274,138655526 Gene ID= ENSG00000051382.8 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr3 139344027 139357033 139344027 139357033 + ENST00000465056.5@MRPS22 ENST00000465056.5 protein_coding 139344027,139346881,139348160,139350179,139350977,139352647,139355682,139356919 139344198,139347044,139348324,139350322,139351060,139352792,139355790,139357033 Gene ID= ENSG00000175110.11 TPM= 3.62 Transcript Type= protein_coding chr3 139344565 139357014 139344565 139357014 + ENST00000478464.5@MRPS22 ENST00000478464.5 protein_coding 139344565,139346878,139348160,139350179,139350977,139352647,139355682,139356919 139344718,139347044,139348324,139350322,139351060,139352792,139355790,139357014 Gene ID= ENSG00000175110.11 TPM= 1.81 Transcript Type= protein_coding chr3 139353950 139389659 139353950 139389659 - transcript3848.chr3.nic@COPB2 transcript3848.chr3.nic protein_coding 139389469,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139353950 139389659,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958 Gene ID= ENSG00000184432.9 TPM= 9.73 Transcript Type= NA chr3 139357406 139389732 139357406 139389732 - ENST00000333188.9@COPB2 ENST00000333188.9 protein_coding 139389548,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357406 139389732,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958 Gene ID= ENSG00000184432.9 TPM= 235.67 Transcript Type= protein_coding chr3 139357593 139389676 139357593 139389676 - ENST00000507777.5@COPB2 ENST00000507777.5 protein_coding 139389631,139383298,139379380,139379047,139378041,139375468,139374489,139373666,139373213,139371723,139369456,139369261,139368145,139367015,139366568,139362407,139361081,139359270,139358998,139358744,139358200,139357593 139389676,139383435,139379466,139379173,139378189,139375614,139374588,139373808,139373412,139371833,139369544,139369367,139368288,139367145,139366775,139362517,139361295,139359362,139359178,139358812,139358271,139357958 Gene ID= ENSG00000184432.9 TPM= 2.94 Transcript Type= protein_coding chr3 139517433 139539691 139517433 139539691 - transcript3871.chr3.nnic@RBP1 transcript3871.chr3.nnic protein_coding 139539460,139538835,139518421,139517433 139539691,139538959,139518522,139517680 Gene ID= ENSG00000114115.9 TPM= 7.24 Transcript Type= NA chr3 139560185 139677990 139560185 139677990 - transcript3880.chr3.nnic@NMNAT3 transcript3880.chr3.nnic protein_coding 139677705,139627616,139578872,139573598,139560185 139677990,139627761,139579055,139573680,139561392 Gene ID= ENSG00000163864.15 TPM= 3.62 Transcript Type= NA chr3 140403618 140568075 140403618 140568075 + transcript3886.chr3.nic@CLSTN2 transcript3886.chr3.nic protein_coding 140403618,140404558,140421125,140448519,140459521,140466610,140532324,140546515,140556513,140558640,140562138,140562811,140563080,140563961,140566053 140403824,140404766,140421274,140448704,140459769,140466731,140532486,140546681,140556661,140558857,140562308,140562956,140563203,140564145,140568075 Gene ID= ENSG00000158258.16 TPM= 1.81 Transcript Type= NA chr3 140941801 140979936 140941801 140979936 + transcript3888.chr3.nic@SLC25A36 transcript3888.chr3.nic protein_coding 140941801,140956527,140959463,140963127,140966934,140970927,140973716,140976260 140942095,140956691,140959540,140963227,140967036,140970993,140974005,140979936 Gene ID= ENSG00000114120.11 TPM= 2.72 Transcript Type= NA chr3 140942195 140979936 140942195 140979936 + transcript3890.chr3.nic@SLC25A36 transcript3890.chr3.nic protein_coding 140942195,140956527,140959463,140963127,140970927,140973716,140976260 140942729,140956691,140959540,140963227,140970993,140974005,140979936 Gene ID= ENSG00000114120.11 TPM= 1.81 Transcript Type= NA chr3 140941830 140979933 140941830 140979933 + ENST00000446041.6@SLC25A36 ENST00000446041.6 protein_coding 140941830,140956527,140959463,140963127,140970927,140973716,140976263 140942095,140956691,140959540,140963227,140970993,140974005,140979933 Gene ID= ENSG00000114120.11 TPM= 26.26 Transcript Type= protein_coding chr3 141231828 141294906 141231828 141294906 + ENST00000286353.8@PXYLP1 ENST00000286353.8 protein_coding 141231828,141260123,141278342,141279378,141287314,141292268 141231911,141260254,141278500,141279504,141287453,141294906 Gene ID= ENSG00000155893.12 TPM= 9.96 Transcript Type= protein_coding chr3 141368493 141448699 141368493 141448699 + transcript3898.chr3.nnic@ZBTB38 transcript3898.chr3.nnic protein_coding 141368493,141369872,141381425,141386872,141403927,141413553,141438243,141442389 141368804,141369946,141381487,141386937,141404031,141413639,141438365,141448699 Gene ID= ENSG00000177311.11 TPM= 4.98 Transcript Type= NA chr3 141368509 141448905 141368509 141448905 + transcript3899.chr3.nic@ZBTB38 transcript3899.chr3.nic protein_coding 141368509,141369872,141381425,141386872,141403927,141442389 141368804,141369946,141381487,141386937,141404031,141448905 Gene ID= ENSG00000177311.11 TPM= 8.6 Transcript Type= NA chr3 141368304 141394457 141368304 141394457 + ENST00000513619.5@ZBTB38 ENST00000513619.5 protein_coding 141368304,141369872,141381425,141386872,141394200 141368804,141369946,141381487,141386937,141394457 Gene ID= ENSG00000177311.11 TPM= 1.81 Transcript Type= processed_transcript chr3 141658747 141661683 141658747 141661683 - transcript3908.chr3.nnic@NA transcript3908.chr3.nnic NA 141661173,141659117,141658747 141661683,141660149,141659077 Gene ID= novel_gene_chr3_3909 TPM= 3.62 Transcript Type= NA chr3 141738277 141745700 141738277 141745700 + ENST00000480908.1@RNF7 ENST00000480908.1 protein_coding 141738277,141745159 141738516,141745700 Gene ID= ENSG00000114125.13 TPM= 3.17 Transcript Type= protein_coding chr3 141738297 141745702 141738297 141745702 + ENST00000393000.3@RNF7 ENST00000393000.3 protein_coding 141738297,141743509,141745159 141738509,141743556,141745702 Gene ID= ENSG00000114125.13 TPM= 14.94 Transcript Type= protein_coding chr3 141738304 141745669 141738304 141745669 + ENST00000477012.5@RNF7 ENST00000477012.5 protein_coding 141738304,141742644,141743509,141745159 141738516,141742907,141743556,141745669 Gene ID= ENSG00000114125.13 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr3 141876243 141926508 141876243 141926508 + transcript3921.chr3.nnic@ATP1B3 transcript3921.chr3.nnic protein_coding 141876243,141903620,141907167,141913652,141921977,141925531 141876910,141903748,141907274,141913836,141922063,141926508 Gene ID= ENSG00000069849.10 TPM= 3.62 Transcript Type= NA chr3 141876614 141926484 141876614 141926484 + ENST00000286371.7@ATP1B3 ENST00000286371.7 protein_coding 141876614,141903620,141907167,141913652,141915970,141921977,141925531 141876910,141903748,141907274,141913836,141916020,141922063,141926484 Gene ID= ENSG00000069849.10 TPM= 132.21 Transcript Type= protein_coding chr3 141949826 142149544 141949826 142149544 - transcript3925.chr3.nic@TFDP2 transcript3925.chr3.nic protein_coding 142149183,142101735,142093061,142054115,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141949826 142149544,142101841,142093127,142054149,142005544,141995141,141993585,141978682,141974191,141970141,141963963,141959840,141953016,141952696 Gene ID= ENSG00000114126.17 TPM= 7.17 Transcript Type= NA chr3 141949826 142149544 141949826 142149544 - transcript3931.chr3.nic@TFDP2 transcript3931.chr3.nic protein_coding 142149183,142101735,142093061,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141949826 142149544,142101841,142093127,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696 Gene ID= ENSG00000114126.17 TPM= 7.17 Transcript Type= NA chr3 141949826 142028657 141949826 142028657 - transcript3942.chr3.nic@TFDP2 transcript3942.chr3.nic protein_coding 142028579,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141949826 142028657,142005544,141995141,141993585,141978682,141974191,141970141,141963963,141959840,141953016,141952696 Gene ID= ENSG00000114126.17 TPM= 8.08 Transcript Type= NA chr3 141951502 142028665 141951502 142028665 - ENST00000486111.5@TFDP2 ENST00000486111.5 protein_coding 142028579,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141951502 142028665,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696 Gene ID= ENSG00000114126.17 TPM= 10.19 Transcript Type= protein_coding chr3 141952481 142149532 141952481 142149532 - ENST00000467072.5@TFDP2 ENST00000467072.5 protein_coding 142149183,142101735,142093061,142054115,142005441,141995020,141993538,141978520,141974048,141970073,141963812,141959674,141952911,141952481 142149532,142101841,142093127,142054149,142005544,141995141,141993585,141978682,141974194,141970141,141963963,141959840,141953016,141952696 Gene ID= ENSG00000114126.17 TPM= 4.53 Transcript Type= protein_coding chr3 142157527 142225607 142157527 142225607 - ENST00000392993.6@GK5 ENST00000392993.6 protein_coding 142225309,142215599,142213526,142204695,142198802,142187704,142186452,142186194,142185929,142182923,142181461,142177482,142172353,142171419,142170325,142157527 142225607,142215692,142213601,142204788,142198933,142187779,142186513,142186267,142185989,142183049,142181565,142177576,142172456,142171478,142170458,142165770 Gene ID= ENSG00000175066.15 TPM= 2.72 Transcript Type= protein_coding chr3 142449237 142578826 142449237 142578826 - ENST00000350721.8@ATR ENST00000350721.8 protein_coding 142578646,142568063,142566121,142562232,142561243,142560263,142559251,142558624,142556383,142555877,142553825,142553640,142553227,142550132,142549479,142547725,142542665,142540904,142538482,142536108,142535080,142523993,142522728,142519669,142515395,142513501,142512260,142507931,142505139,142503362,142499627,142498597,142497013,142496361,142493132,142485140,142470086,142469337,142467934,142466324,142465097,142461940,142459227,142458958,142457604,142453128,142449237 142578826,142568154,142566261,142563109,142561421,142560454,142559441,142558776,142556575,142556139,142554015,142553740,142553398,142550302,142549673,142547910,142542757,142541034,142538625,142536201,142535205,142524199,142522841,142519784,142515515,142513638,142512470,142508109,142505303,142503453,142499718,142498774,142497192,142496520,142493311,142485282,142470183,142469569,142468068,142466533,142465240,142462090,142459383,142459111,142457755,142453233,142449602 Gene ID= ENSG00000175054.14 TPM= 7.24 Transcript Type= protein_coding chr3 142596387 142713664 142596387 142713664 + ENST00000457734.6@PLS1 ENST00000457734.6 protein_coding 142596387,142664202,142669390,142670993,142676157,142678032,142684006,142684253,142686284,142689618,142694469,142697953,142703868,142704463,142711501,142711872 142596509,142664307,142669553,142671122,142676289,142678113,142684171,142684395,142686376,142689813,142694547,142698067,142704001,142704586,142711625,142713664 Gene ID= ENSG00000120756.12 TPM= 14.49 Transcript Type= protein_coding chr3 142724557 142807885 142724557 142807885 + transcript3965.chr3.nic@TRPC1 transcript3965.chr3.nic protein_coding 142724557,142748258,142777632,142780834,142784704,142791019,142792824,142802169,142803977,142804436,142806008 142724731,142748460,142777763,142781029,142785040,142791158,142792967,142802344,142804178,142804630,142807885 Gene ID= ENSG00000144935.14 TPM= 1.81 Transcript Type= NA chr3 142817869 142889203 142817869 142889203 - ENST00000295992.7@PCOLCE2 ENST00000295992.7 protein_coding 142888814,142887669,142848217,142842924,142838770,142829692,142823532,142820878,142817869 142889203,142887777,142848472,142843048,142838906,142829846,142823615,142821045,142818465 Gene ID= ENSG00000163710.7 TPM= 5.43 Transcript Type= protein_coding chr3 143001539 143060546 143001539 143060546 + ENST00000473835.6@U2SURP ENST00000473835.6 protein_coding 143001539,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143054943,143056312 143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143055119,143060546 Gene ID= ENSG00000163714.17 TPM= 12.68 Transcript Type= protein_coding chr3 143001570 143057650 143001570 143057650 + transcript3970.chr3.nic@U2SURP transcript3970.chr3.nic protein_coding 143001570,143010815,143012222,143014311,143016257,143016842,143019969,143020599,143021350,143021473,143022497,143022853,143023975,143027149,143028340,143028483,143032784,143033271,143034888,143035982,143037179,143038108,143038894,143043117,143050939,143053676,143056312 143001673,143010859,143012353,143014409,143016371,143016975,143020036,143020693,143021385,143021555,143022662,143023064,143024018,143027253,143028406,143028646,143032946,143033350,143034975,143036104,143037335,143038203,143038960,143043276,143051049,143053794,143057650 Gene ID= ENSG00000163714.17 TPM= 1.81 Transcript Type= NA chr3 143119331 143124014 143119331 143124014 + ENST00000309575.4@CHST2 ENST00000309575.4 protein_coding 143119331,143120644 143120541,143124014 Gene ID= ENSG00000175040.5 TPM= 8.15 Transcript Type= protein_coding chr3 143265222 143848531 143265222 143848531 - ENST00000316549.10@SLC9A9 ENST00000316549.10 protein_coding 143848148,143832019,143796826,143795001,143693192,143652255,143578585,143574088,143552362,143495335,143493653,143467037,143382060,143363484,143268875,143265222 143848531,143832221,143796903,143795077,143693307,143652360,143578723,143574193,143552450,143495448,143493764,143467190,143382114,143363563,143268980,143266929 Gene ID= ENSG00000181804.14 TPM= 16.3 Transcript Type= protein_coding chr3 143971798 143992359 143971798 143992359 + ENST00000315691.7@C3orf58 ENST00000315691.7 protein_coding 143971798,143985543,143989510 143972989,143985846,143992359 Gene ID= ENSG00000181744.8 TPM= 35.32 Transcript Type= protein_coding chr3 146069444 146161167 146069444 146161167 - ENST00000360060.7@PLOD2 ENST00000360060.7 protein_coding 146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146076782,146073287,146072561,146071277,146071042,146069444 146161167,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146076895,146073352,146072665,146071423,146071167,146070872 Gene ID= ENSG00000152952.11 TPM= 51.62 Transcript Type= protein_coding chr3 146069440 146161167 146069440 146161167 - ENST00000282903.9@PLOD2 ENST00000282903.9 protein_coding 146160881,146124138,146121112,146110285,146106532,146104279,146102755,146091800,146088586,146086787,146085169,146081738,146079116,146077862,146076782,146073287,146072561,146071277,146071042,146069440 146161167,146124229,146121248,146110448,146106644,146104342,146102852,146091901,146088711,146086908,146085273,146081863,146079257,146077924,146076895,146073352,146072665,146071423,146071167,146070872 Gene ID= ENSG00000152952.11 TPM= 33.51 Transcript Type= protein_coding chr3 146192339 146251083 146192339 146251083 - transcript3994.chr3.nic@PLSCR4 transcript3994.chr3.nic protein_coding 146250557,146223733,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339 146251083,146223777,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455 Gene ID= ENSG00000114698.14 TPM= 4.53 Transcript Type= NA chr3 146192339 146251178 146192339 146251178 - transcript3995.chr3.nic@PLSCR4 transcript3995.chr3.nic protein_coding 146250960,146223733,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339 146251178,146223777,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455 Gene ID= ENSG00000114698.14 TPM= 7.24 Transcript Type= NA chr3 146192339 146251195 146192339 146251195 - transcript3996.chr3.nic@PLSCR4 transcript3996.chr3.nic protein_coding 146250960,146250557,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339 146251195,146250637,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455 Gene ID= ENSG00000114698.14 TPM= 17.21 Transcript Type= NA chr3 146192339 146251179 146192339 146251179 - ENST00000354952.6@PLSCR4 ENST00000354952.6 protein_coding 146250960,146222065,146220815,146206526,146201035,146199813,146196632,146195124,146192339 146251179,146222092,146220925,146206761,146201077,146200039,146196793,146195282,146194455 Gene ID= ENSG00000114698.14 TPM= 102.33 Transcript Type= protein_coding chr3 146192339 146251179 146192339 146251179 - ENST00000383083.6@PLSCR4 ENST00000383083.6 protein_coding 146250960,146222065,146220815,146206526,146196632,146195124,146192339 146251179,146222092,146220925,146206761,146196793,146195282,146194455 Gene ID= ENSG00000114698.14 TPM= 5.43 Transcript Type= protein_coding chr3 146515180 146544864 146515180 146544864 - ENST00000342435.8@PLSCR1 ENST00000342435.8 protein_coding 146544467,146536540,146533470,146528614,146525605,146521833,146521544,146517006,146515180 146544864,146536565,146533550,146528831,146525647,146522053,146521705,146517167,146516101 Gene ID= ENSG00000188313.12 TPM= 68.82 Transcript Type= protein_coding chr3 148697784 148743003 148697784 148743003 + ENST00000497524.5@AGTR1 ENST00000497524.5 protein_coding 148697784,148740989 148698127,148743003 Gene ID= ENSG00000144891.17 TPM= 54.79 Transcript Type= protein_coding chr3 148697871 148743003 148697871 148743003 + ENST00000349243.7@AGTR1 ENST00000349243.7 protein_coding 148697871,148707944,148740989 148698127,148708027,148743003 Gene ID= ENSG00000144891.17 TPM= 45.73 Transcript Type= protein_coding chr3 148730180 148743001 148730180 148743001 + ENST00000418473.6@AGTR1 ENST00000418473.6 protein_coding 148730180,148740989 148730237,148743001 Gene ID= ENSG00000144891.17 TPM= 1.36 Transcript Type= protein_coding chr3 148697902 148860193 148697902 148860193 + transcript4012.chr3.nnic@CPB1 transcript4012.chr3.nnic protein_coding 148697902,148827654,148828002,148834498,148840686,148840874,148841823,148844478,148844677,148845424,148857457,148859815 148698127,148827894,148828077,148834622,148840785,148840975,148841924,148844588,148844767,148845626,148857541,148860193 Gene ID= ENSG00000153002.11 TPM= 229.1 Transcript Type= NA chr3 148991452 149027632 148991452 149027632 + ENST00000296048.10@GYG1 ENST00000296048.10 protein_coding 148991452,148994142,148996302,148996742,149009276,149024053,149026760 148991647,148994277,148996476,148996904,149009402,149024272,149027632 Gene ID= ENSG00000163754.17 TPM= 50.71 Transcript Type= protein_coding chr3 149030117 149086543 149030117 149086543 - transcript4026.chr3.nic@HLTF transcript4026.chr3.nic protein_coding 149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149032201,149030117 149086543,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059807,149055400,149050375,149049001,149048163,149046259,149042290,149041680,149040156,149039693,149039229,149034998,149032372,149031363 Gene ID= ENSG00000071794.15 TPM= 2.56 Transcript Type= NA chr3 149030117 149086543 149030117 149086543 - transcript4028.chr3.nic@HLTF transcript4028.chr3.nic protein_coding 149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149030117 149086543,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059807,149055400,149050375,149049001,149048163,149046259,149042290,149041680,149040156,149039693,149039229,149034998,149032372 Gene ID= ENSG00000071794.15 TPM= 6.64 Transcript Type= NA chr3 149030127 149086522 149030127 149086522 - ENST00000465259.5@HLTF ENST00000465259.5 protein_coding 149086317,149084682,149075881,149074215,149073225,149071583,149071252,149068240,149064791,149063431,149060779,149060643,149059718,149055303,149050232,149048863,149048028,149046080,149042166,149041490,149040031,149039581,149039049,149034918,149030127 149086522,149084889,149076047,149074348,149073322,149071657,149071443,149068335,149064866,149063524,149060858,149060687,149059804,149055400,149050375,149049001,149048163,149046259,149042290,149041668,149040156,149039693,149039229,149034998,149032372 Gene ID= ENSG00000071794.15 TPM= 4.37 Transcript Type= protein_coding chr3 149129626 149172944 149129626 149172944 + transcript4043.chr3.nic@HPS3 transcript4043.chr3.nic protein_coding 149129626,149141017,149141295,149145354,149150599,149153494,149155107,149157350,149158666,149160046,149162148,149162690,149163842,149167065,149167893,149172095 149129940,149141188,149141380,149145546,149150680,149153648,149155215,149157531,149158846,149160279,149162333,149162878,149163949,149167240,149167983,149172944 Gene ID= ENSG00000163755.8 TPM= 1.81 Transcript Type= NA chr3 149129626 149154139 149129626 149154139 + transcript4050.chr3.nic@HPS3 transcript4050.chr3.nic protein_coding 149129626,149141017,149141295,149145354,149150599,149153494 149129940,149141188,149141380,149145546,149150680,149154139 Gene ID= ENSG00000163755.8 TPM= 2.72 Transcript Type= NA chr3 149129691 149154109 149129691 149154109 + ENST00000486530.1@HPS3 ENST00000486530.1 protein_coding 149129691,149140004,149141017,149141295,149145354,149150599,149153494 149129940,149140498,149141188,149141380,149145546,149150680,149154109 Gene ID= ENSG00000163755.8 TPM= 3.62 Transcript Type= retained_intron chr3 149172499 149222055 149172499 149222055 - ENST00000264613.10@CP ENST00000264613.10 protein_coding 149221647,149212451,149210167,149209211,149207363,149206168,149202102,149199712,149198367,149188052,149186520,149185239,149183466,149182005,149179556,149178415,149177840,149176250,149172499 149222055,149212698,149210379,149209384,149207617,149206339,149202241,149199864,149198578,149188202,149186732,149185446,149183605,149182133,149179662,149178631,149177979,149176412,149173730 Gene ID= ENSG00000047457.13 TPM= 2.72 Transcript Type= protein_coding chr3 149318498 149333761 149318498 149333761 - ENST00000296059.6@TM4SF18 ENST00000296059.6 protein_coding 149333513,149333206,149330330,149324880,149322256,149318498 149333761,149333399,149330419,149325022,149322436,149321492 Gene ID= ENSG00000163762.6 TPM= 8.15 Transcript Type= protein_coding chr3 149369022 149377865 149369022 149377865 - ENST00000305366.7@TM4SF1 ENST00000305366.7 protein_coding 149377371,149375680,149375443,149371687,149369022 149377865,149375769,149375588,149371867,149369880 Gene ID= ENSG00000169908.11 TPM= 76.07 Transcript Type= protein_coding chr3 149654743 149658053 149654743 149658053 - transcript4058.chr3.nnic@WWTR1 transcript4058.chr3.nnic protein_coding 149657765,149656876,149654743 149658053,149657309,149655122 Gene ID= ENSG00000018408.14 TPM= 1.81 Transcript Type= NA chr3 149520245 149658101 149520245 149658101 - ENST00000360632.7@WWTR1 ENST00000360632.7 protein_coding 149657765,149656876,149572864,149542335,149527836,149526013,149520245 149658101,149657309,149573000,149542537,149527969,149526125,149520989 Gene ID= ENSG00000018408.14 TPM= 9.96 Transcript Type= protein_coding chr3 149740748 149752512 149740748 149752512 - transcript4064.chr3.nic@COMMD2 transcript4064.chr3.nic protein_coding 149752378,149751403,149750678,149740748 149752512,149752287,149750851,149741718 Gene ID= ENSG00000114744.8 TPM= 1.81 Transcript Type= NA chr3 149738470 149752499 149738470 149752499 - ENST00000473414.5@COMMD2 ENST00000473414.5 protein_coding 149752378,149752210,149751403,149750678,149738470 149752499,149752287,149751485,149750851,149741718 Gene ID= ENSG00000114744.8 TPM= 34.41 Transcript Type= protein_coding chr3 149812708 149962139 149812708 149962139 + ENST00000392894.7@RNF13 ENST00000392894.7 protein_coding 149812708,149846011,149852516,149872029,149895473,149902072,149911978,149921134,149960056,149960740 149813353,149846140,149852596,149872154,149895560,149902162,149912083,149921227,149960136,149962139 Gene ID= ENSG00000082996.19 TPM= 124.51 Transcript Type= protein_coding chr3 149964904 149970950 149964904 149970950 - ENST00000452853.6@PFN2 ENST00000452853.6 protein_coding 149970725,149968358,149964904 149970950,149968550,149966264 Gene ID= ENSG00000070087.13 TPM= 79.69 Transcript Type= protein_coding chr3 150565796 150603228 150565796 150603228 - ENST00000490945.1@SERP1 ENST00000490945.1 protein_coding 150602944,150565796 150603228,150567106 Gene ID= ENSG00000120742.10 TPM= 4.53 Transcript Type= processed_transcript chr3 150546694 150584242 150546694 150584242 + ENST00000460851.5@EIF2A ENST00000460851.5 protein_coding 150546694,150552356,150558388,150562542,150563515,150564299,150567693,150567902,150568176,150571958,150575649,150581618,150583200,150583846 150546830,150552425,150558462,150562660,150563614,150564381,150567766,150568046,150568292,150572529,150575762,150581746,150583265,150584242 Gene ID= ENSG00000144895.11 TPM= 62.48 Transcript Type= protein_coding chr3 150603288 150630435 150603288 150630435 + ENST00000471696.5@SELENOT ENST00000471696.5 protein_coding 150603288,150622385,150623043,150624812,150627010,150627659 150603499,150622495,150623169,150624899,150627163,150630435 Gene ID= ENSG00000198843.12 TPM= 220.05 Transcript Type= protein_coding chr3 150741125 150763503 150741125 150763503 - transcript4103.chr3.nnic@SIAH2 transcript4103.chr3.nnic protein_coding 150762433,150745696,150741125 150763503,150745860,150742698 Gene ID= ENSG00000181788.3 TPM= 8.6 Transcript Type= NA chr3 150741127 150763377 150741127 150763377 - ENST00000312960.3@SIAH2 ENST00000312960.3 protein_coding 150762433,150741127 150763377,150742698 Gene ID= ENSG00000181788.3 TPM= 366.29 Transcript Type= protein_coding chr3 151326312 151329548 151326312 151329548 - ENST00000325602.5@P2RY13 ENST00000325602.5 protein_coding 151329481,151326312 151329548,151329007 Gene ID= ENSG00000181631.6 TPM= 1.81 Transcript Type= protein_coding chr3 151433494 151458709 151433494 151458709 - ENST00000282466.3@IGSF10 ENST00000282466.3 protein_coding 151458516,151457026,151453384,151444919,151442984,151433494 151458709,151457155,151453774,151449265,151443884,151438597 Gene ID= ENSG00000152580.8 TPM= 4.53 Transcript Type= protein_coding chr3 151436541 151445879 151436541 151445879 - transcript4118.chr3.nnic@IGSF10 transcript4118.chr3.nnic protein_coding 151444919,151442984,151436541 151445879,151443884,151437994 Gene ID= ENSG00000152580.8 TPM= 1.81 Transcript Type= NA chr3 151814020 151829381 151814020 151829381 + transcript4130.chr3.nnic@AADAC transcript4130.chr3.nnic protein_coding 151814020,151817417,151820383,151824663,151827576 151814300,151817588,151820452,151824834,151829381 Gene ID= ENSG00000114771.13 TPM= 107.99 Transcript Type= NA chr3 151814037 151828488 151814037 151828488 + ENST00000232892.11@AADAC ENST00000232892.11 protein_coding 151814037,151817366,151820383,151824663,151827576 151814300,151817588,151820452,151824834,151828488 Gene ID= ENSG00000114771.13 TPM= 802.31 Transcript Type= protein_coding chr3 151814055 151839976 151814055 151839976 + transcript4135.chr3.nnic@NA transcript4135.chr3.nnic NA 151814055,151817366,151820383,151824663,151837193 151814300,151817588,151820452,151824834,151839976 Gene ID= novel_gene_chr3_4136 TPM= 1.81 Transcript Type= NA chr3 152268040 152465779 152268040 152465779 + ENST00000282488.11@MBNL1 ENST00000282488.11 protein_coding 152268040,152299405,152414941,152432717,152445282,152446704,152447620,152455542,152456267,152459271,152462385 152269092,152300367,152415111,152432920,152445539,152446757,152447773,152455577,152456361,152459345,152465779 Gene ID= ENSG00000152601.17 TPM= 4.12 Transcript Type= protein_coding chr3 152268930 152465781 152268930 152465781 + transcript4141.chr3.nic@MBNL1 transcript4141.chr3.nic protein_coding 152268930,152414941,152432717,152445282,152446704,152447620,152455542,152456267,152459271,152462385 152269092,152415111,152432920,152445539,152446757,152447773,152455577,152456361,152459345,152465781 Gene ID= ENSG00000152601.17 TPM= 4.27 Transcript Type= NA chr3 152268468 152465780 152268468 152465780 + ENST00000355460.6@MBNL1 ENST00000355460.6 protein_coding 152268468,152299405,152414941,152432717,152445282,152447620,152456267,152459271,152462385 152269092,152300367,152415111,152432920,152445539,152447773,152456361,152459345,152465780 Gene ID= ENSG00000152601.17 TPM= 4.65 Transcript Type= protein_coding chr3 152268863 152465781 152268863 152465781 + transcript4145.chr3.nic@MBNL1 transcript4145.chr3.nic protein_coding 152268863,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385 152269092,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465781 Gene ID= ENSG00000152601.17 TPM= 9.25 Transcript Type= NA chr3 152268863 152465781 152268863 152465781 + transcript4151.chr3.nic@MBNL1 transcript4151.chr3.nic protein_coding 152268863,152414941,152432717,152445282,152447620,152456267,152459271,152462385 152269092,152415111,152432920,152445539,152447773,152456361,152459345,152465781 Gene ID= ENSG00000152601.17 TPM= 5.25 Transcript Type= NA chr3 152268963 152465763 152268963 152465763 + ENST00000324210.9@MBNL1 ENST00000324210.9 protein_coding 152268963,152299405,152414941,152432717,152445282,152447620,152455542,152456267,152459271,152462385 152269092,152300367,152415111,152432920,152445539,152447773,152455577,152456361,152459345,152465763 Gene ID= ENSG00000152601.17 TPM= 3.24 Transcript Type= protein_coding chr3 152262616 152269555 152262616 152269555 - ENST00000608395.1@MBNL1-AS1 ENST00000608395.1 antisense_RNA 152269428,152262616 152269555,152269072 Gene ID= ENSG00000229619.3 TPM= 5.43 Transcript Type= antisense_RNA chr3 154121360 154256575 154121360 154256575 + ENST00000465093.5@ARHGEF26 ENST00000465093.5 protein_coding 154121360,154121942,154124410,154129574,154149389,154152772,154187685,154191289,154194644,154217869,154225856,154240370,154253116,154254720,154255331 154121519,154123075,154124449,154129719,154149445,154152932,154187837,154191418,154194718,154217958,154226010,154240579,154253183,154254824,154256575 Gene ID= ENSG00000114790.12 TPM= 3.62 Transcript Type= protein_coding chr3 155824178 155854430 155824178 155854430 - transcript4167.chr3.nnic@SLC33A1 transcript4167.chr3.nnic protein_coding 155853223,155842432,155833468,155829688,155824178 155854430,155842619,155833585,155829903,155828377 Gene ID= ENSG00000169359.13 TPM= 2.87 Transcript Type= NA chr3 155824178 155854430 155824178 155854430 - transcript4168.chr3.nic@SLC33A1 transcript4168.chr3.nic protein_coding 155853223,155842432,155833468,155829688,155824178 155854430,155842619,155834041,155829903,155828377 Gene ID= ENSG00000169359.13 TPM= 3.78 Transcript Type= NA chr3 155824178 155854397 155824178 155854397 - transcript4170.chr3.nnic@SLC33A1 transcript4170.chr3.nnic protein_coding 155853223,155833857,155829688,155824178 155854397,155834041,155829903,155828377 Gene ID= ENSG00000169359.13 TPM= 2.42 Transcript Type= NA chr3 156540140 156555184 156540140 156555184 - ENST00000265044.6@SSR3 ENST00000265044.6 protein_coding 156554957,156553655,156548905,156544308,156540140 156555184,156553781,156549003,156544439,156543269 Gene ID= ENSG00000114850.6 TPM= 113.19 Transcript Type= protein_coding chr3 156671862 156674378 156671862 156674378 - ENST00000492937.1@TIPARP-AS1 ENST00000492937.1 antisense_RNA 156674207,156671862 156674378,156672130 Gene ID= ENSG00000243926.1 TPM= 2.72 Transcript Type= antisense_RNA chr3 156747346 156817034 156747346 156817034 - ENST00000472943.5@LINC00886 ENST00000472943.5 lincRNA 156816887,156751095,156747346 156817034,156751183,156750414 Gene ID= ENSG00000240875.5 TPM= 2.72 Transcript Type= lincRNA chr3 157146503 157160177 157146503 157160177 - transcript4189.chr3.nic@CCNL1 transcript4189.chr3.nic protein_coding 157159792,157159405,157158866,157156936,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157146503 157160177,157159479,157158975,157157083,157153156,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157146607 Gene ID= ENSG00000163660.11 TPM= 1.81 Transcript Type= NA chr3 157147799 157160145 157147799 157160145 - transcript4191.chr3.nic@CCNL1 transcript4191.chr3.nic protein_coding 157159792,157159405,157158866,157157011,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157147799 157160145,157159479,157158975,157157083,157153156,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 2.04 Transcript Type= NA chr3 157146503 157160148 157146503 157160148 - transcript4192.chr3.nic@CCNL1 transcript4192.chr3.nic protein_coding 157159792,157159405,157158866,157157011,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157146503 157160148,157159479,157158975,157157083,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157146607 Gene ID= ENSG00000163660.11 TPM= 1.81 Transcript Type= NA chr3 157147743 157160145 157147743 157160145 - transcript4195.chr3.nic@CCNL1 transcript4195.chr3.nic protein_coding 157159792,157159405,157158866,157153036,157152177,157151917,157150282,157150065,157149836,157149485,157149287,157147743 157160145,157159479,157158975,157153156,157152241,157151930,157150381,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 2.94 Transcript Type= NA chr3 157147744 157160184 157147744 157160184 - transcript4197.chr3.nic@CCNL1 transcript4197.chr3.nic protein_coding 157159792,157159405,157158866,157156936,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147744 157160184,157159479,157158975,157157083,157153156,157152241,157151930,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 3.62 Transcript Type= NA chr3 157147558 157160150 157147558 157160150 - transcript4198.chr3.nic@CCNL1 transcript4198.chr3.nic protein_coding 157159792,157159405,157158866,157157011,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147558 157160150,157159479,157158975,157157083,157153156,157152241,157151930,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 5.43 Transcript Type= NA chr3 157147799 157160177 157147799 157160177 - transcript4203.chr3.nic@CCNL1 transcript4203.chr3.nic protein_coding 157159792,157159405,157158866,157157011,157153036,157150282,157150065,157149836,157149485,157149287,157147799 157160177,157159479,157158975,157157083,157153156,157152241,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 4.07 Transcript Type= NA chr3 157147743 157160145 157147743 157160145 - transcript4205.chr3.nic@CCNL1 transcript4205.chr3.nic protein_coding 157159792,157159405,157158866,157153036,157150282,157150065,157149836,157149485,157149287,157147743 157160145,157159479,157158975,157153156,157152241,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 4.07 Transcript Type= NA chr3 157147553 157160213 157147553 157160213 - ENST00000295926.7@CCNL1 ENST00000295926.7 protein_coding 157159792,157159405,157158866,157153036,157152177,157150282,157150065,157149836,157149485,157149287,157147553 157160213,157159479,157158975,157153156,157152241,157150381,157150169,157149977,157149596,157149385,157148589 Gene ID= ENSG00000163660.11 TPM= 30.11 Transcript Type= protein_coding chr3 157259744 157503430 157259744 157503430 - transcript4207.chr3.nic@VEPH1 transcript4207.chr3.nic protein_coding 157503277,157495212,157493187,157489055,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259744 157503430,157495506,157493293,157489160,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 3.04 Transcript Type= NA chr3 157259744 157503430 157259744 157503430 - transcript4210.chr3.nic@VEPH1 transcript4210.chr3.nic protein_coding 157503277,157495212,157489055,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259744 157503430,157495506,157489160,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 10.29 Transcript Type= NA chr3 157259744 157503430 157259744 157503430 - transcript4211.chr3.nnic@VEPH1 transcript4211.chr3.nnic protein_coding 157503277,157495212,157493187,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259744 157503430,157495506,157493293,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 2.59 Transcript Type= NA chr3 157259744 157503419 157259744 157503419 - transcript4212.chr3.nnic@VEPH1 transcript4212.chr3.nnic protein_coding 157503277,157499395,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259744 157503419,157499656,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 12.85 Transcript Type= NA chr3 157259742 157503427 157259742 157503427 - ENST00000362010.6@VEPH1 ENST00000362010.6 protein_coding 157503277,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259742 157503427,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 24.62 Transcript Type= protein_coding chr3 157259744 157533638 157259744 157533638 - transcript4215.chr3.nic@VEPH1 transcript4215.chr3.nic protein_coding 157533513,157495212,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259744 157533638,157495506,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 2.89 Transcript Type= NA chr3 157259744 157503389 157259744 157503389 - transcript4219.chr3.nnic@VEPH1 transcript4219.chr3.nnic protein_coding 157503277,157470314,157460181,157428322,157413881,157381156,157364303,157363364,157317062,157313621,157286557,157265526,157259744 157503389,157470529,157460355,157428488,157414090,157381376,157364512,157363761,157317201,157313755,157286674,157265662,157261370 Gene ID= ENSG00000197415.11 TPM= 2.59 Transcript Type= NA chr3 157459626 157503430 157459626 157503430 - transcript4225.chr3.nic@VEPH1 transcript4225.chr3.nic protein_coding 157503277,157495212,157470314,157460181,157459626 157503430,157495506,157470529,157460355,157459926 Gene ID= ENSG00000197415.11 TPM= 1.81 Transcript Type= NA chr3 157459626 157503419 157459626 157503419 - transcript4226.chr3.nnic@VEPH1 transcript4226.chr3.nnic protein_coding 157503277,157499395,157495212,157470314,157459626 157503419,157499656,157495506,157470529,157460355 Gene ID= ENSG00000197415.11 TPM= 3.62 Transcript Type= NA chr3 157459626 157503430 157459626 157503430 - transcript4228.chr3.nic@VEPH1 transcript4228.chr3.nic protein_coding 157503277,157495212,157470314,157459626 157503430,157495506,157470529,157460355 Gene ID= ENSG00000197415.11 TPM= 3.62 Transcript Type= NA chr3 158110052 158544835 158110052 158544835 + ENST00000295930.7@RSRC1 ENST00000295930.7 protein_coding 158110052,158122103,158123866,158203072,158298039,158354857,158460935,158537092,158543335,158544183 158110211,158122298,158123991,158203245,158298075,158354908,158461003,158537198,158543487,158544835 Gene ID= ENSG00000174891.12 TPM= 4.07 Transcript Type= protein_coding chr3 158110052 158544834 158110052 158544834 + ENST00000611884.4@RSRC1 ENST00000611884.4 protein_coding 158110052,158122103,158123866,158203072,158298039,158354857,158460935,158537092,158543335,158544183 158110223,158122298,158123991,158203245,158298075,158354908,158461003,158537198,158543487,158544834 Gene ID= ENSG00000174891.12 TPM= 4.07 Transcript Type= protein_coding chr3 158571160 158606459 158571160 158606459 + transcript4233.chr3.nic@MLF1 transcript4233.chr3.nic protein_coding 158571160,158588852,158592434,158596862,158598080,158600014,158602807,158605097 158571347,158588924,158592581,158596945,158598208,158600173,158602939,158606459 Gene ID= ENSG00000178053.17 TPM= 2.72 Transcript Type= NA chr3 158571163 158606460 158571163 158606460 + ENST00000355893.9@MLF1 ENST00000355893.9 protein_coding 158571163,158592434,158596862,158598080,158600014,158602807,158605097 158571347,158592581,158596945,158598208,158600173,158602939,158606460 Gene ID= ENSG00000178053.17 TPM= 6.34 Transcript Type= protein_coding chr3 158571184 158606456 158571184 158606456 + ENST00000359117.9@MLF1 ENST00000359117.9 protein_coding 158571184,158592434,158596862,158598080,158600014,158602807,158605097 158571391,158592581,158596945,158598208,158600173,158602939,158606456 Gene ID= ENSG00000178053.17 TPM= 2.72 Transcript Type= protein_coding chr3 158644278 158692575 158644278 158692575 + ENST00000486715.5@GFM1 ENST00000486715.5 protein_coding 158644278,158645629,158646165,158646743,158649041,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336 158644715,158645781,158646297,158646947,158649157,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692575 Gene ID= ENSG00000168827.14 TPM= 112.29 Transcript Type= protein_coding chr3 158644597 158692569 158644597 158692569 + ENST00000264263.9@GFM1 ENST00000264263.9 protein_coding 158644597,158645629,158646165,158646743,158649041,158650005,158652096,158653310,158654547,158658922,158660874,158662628,158665337,158666304,158681995,158684524,158690163,158691139,158691336 158644715,158645781,158646297,158646947,158649157,158650061,158652246,158653467,158654631,158659059,158660975,158662684,158665474,158666386,158682157,158684668,158690323,158691192,158692569 Gene ID= ENSG00000168827.14 TPM= 2.72 Transcript Type= protein_coding chr3 158666414 158672693 158666414 158672693 - ENST00000264265.3@LXN ENST00000264265.3 protein_coding 158672350,158670957,158669433,158668996,158667012,158666414 158672693,158671019,158669610,158669132,158667074,158666744 Gene ID= ENSG00000079257.7 TPM= 68.82 Transcript Type= protein_coding chr3 158697108 158732807 158697108 158732807 - transcript4252.chr3.nnic@RARRES1 transcript4252.chr3.nnic protein_coding 158732140,158713797,158710738,158704791,158697908,158697108 158732807,158713859,158710921,158704927,158697970,158697827 Gene ID= ENSG00000118849.9 TPM= 3.62 Transcript Type= NA chr3 158802051 158829716 158802051 158829716 + ENST00000484166.5@MFSD1 ENST00000484166.5 protein_coding 158802051,158804319,158807040,158807396,158809179,158813965,158819649,158820215,158821597,158821984,158823428,158824124,158826015,158827280,158828979 158802315,158804371,158807082,158807463,158809287,158814067,158819747,158820326,158821653,158822140,158823525,158824236,158826062,158827337,158829716 Gene ID= ENSG00000118855.18 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr3 160256986 160399532 160256986 160399532 - ENST00000326448.11@IFT80 ENST00000326448.11 protein_coding 160399146,160384564,160381503,160377430,160375812,160366043,160357489,160356013,160319760,160307663,160303915,160300883,160285804,160282478,160280667,160279193,160277581,160277306,160268413,160256986 160399532,160384646,160381724,160377540,160375880,160366152,160357578,160356150,160319939,160307781,160303989,160301046,160285868,160282613,160280814,160279364,160277670,160277478,160268536,160258635 Gene ID= ENSG00000068885.14 TPM= 6.34 Transcript Type= protein_coding chr3 160435503 160449829 160435503 160449829 - ENST00000309784.8@TRIM59 ENST00000309784.8 protein_coding 160449717,160448726,160435503 160449829,160448795,160439186 Gene ID= ENSG00000213186.7 TPM= 1.81 Transcript Type= protein_coding chr3 161083883 161105370 161083883 161105370 - ENST00000392779.6@B3GALNT1 ENST00000392779.6 protein_coding 161105235,161104319,161103427,161083883 161105370,161104406,161103517,161086788 Gene ID= ENSG00000169255.13 TPM= 4.07 Transcript Type= protein_coding chr3 161083883 161105324 161083883 161105324 - ENST00000320474.8@B3GALNT1 ENST00000320474.8 protein_coding 161105235,161104319,161103427,161101139,161083883 161105324,161104406,161103517,161101233,161086788 Gene ID= ENSG00000169255.13 TPM= 7.7 Transcript Type= protein_coding chr3 161221269 161252432 161221269 161252432 + transcript4297.chr3.nic@NMD3 transcript4297.chr3.nic protein_coding 161221269,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780 161221331,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252432 Gene ID= ENSG00000169251.12 TPM= 17.21 Transcript Type= NA chr3 161221269 161252304 161221269 161252304 + transcript4298.chr3.nic@NMD3 transcript4298.chr3.nic protein_coding 161221269,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780 161221409,161222057,161225018,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252304 Gene ID= ENSG00000169251.12 TPM= 1.81 Transcript Type= NA chr3 161221321 161252304 161221321 161252304 + transcript4301.chr3.nic@NMD3 transcript4301.chr3.nic protein_coding 161221321,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780 161221724,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252304 Gene ID= ENSG00000169251.12 TPM= 5.43 Transcript Type= NA chr3 161221290 161252307 161221290 161252307 + ENST00000351193.6@NMD3 ENST00000351193.6 protein_coding 161221290,161221994,161224930,161227247,161233399,161234727,161235122,161238113,161238730,161241046,161242508,161246336,161247258,161249454,161250256,161250780 161221409,161222057,161225064,161227343,161233479,161234855,161235212,161238191,161238826,161241163,161242653,161246448,161247330,161249560,161250326,161252307 Gene ID= ENSG00000169251.12 TPM= 51.62 Transcript Type= protein_coding chr3 167683910 167734939 167683910 167734939 - ENST00000473645.6@PDCD10 ENST00000473645.6 protein_coding 167734806,167725401,167720062,167704842,167697009,167695596,167687615,167687234,167683910 167734939,167725473,167720273,167704895,167697126,167695722,167687693,167687316,167684389 Gene ID= ENSG00000114209.14 TPM= 13.13 Transcript Type= protein_coding chr3 167683912 167734930 167683912 167734930 - ENST00000497056.6@PDCD10 ENST00000497056.6 protein_coding 167734806,167720062,167704842,167697009,167695596,167687615,167687234,167683912 167734930,167720273,167704895,167697126,167695722,167687693,167687316,167684389 Gene ID= ENSG00000114209.14 TPM= 14.94 Transcript Type= protein_coding chr3 167735430 167825568 167735430 167825568 + ENST00000446050.6@SERPINI1 ENST00000446050.6 protein_coding 167735430,167789111,167790372,167792590,167794620,167807244,167822986,167824473,167825247 167735823,167789378,167790602,167792784,167794824,167807341,167823072,167824562,167825568 Gene ID= ENSG00000163536.12 TPM= 5.43 Transcript Type= protein_coding chr3 168008677 168095975 168008677 168095975 - ENST00000470487.5@GOLIM4 ENST00000470487.5 protein_coding 168095099,168048291,168046950,168044828,168043379,168041392,168040786,168036836,168032520,168029780,168029223,168027728,168024928,168024526,168010743,168008677 168095975,168048365,168046999,168044881,168043529,168041474,168040869,168036994,168032852,168030036,168029302,168027837,168025095,168024594,168010823,168010418 Gene ID= ENSG00000173905.8 TPM= 4.53 Transcript Type= protein_coding chr3 169766921 169769895 169766921 169769895 - ENST00000330368.2@ACTRT3 ENST00000330368.2 protein_coding 169769321,169766921 169769895,169768350 Gene ID= ENSG00000184378.2 TPM= 3.62 Transcript Type= protein_coding chr3 169772831 169789181 169772831 169789181 + ENST00000349841.9@MYNN ENST00000349841.9 protein_coding 169772831,169774265,169778768,169780590,169782465,169783477,169784622,169786416 169773462,169774561,169779561,169780749,169782643,169783560,169784708,169789181 Gene ID= ENSG00000085274.15 TPM= 9.96 Transcript Type= protein_coding chr3 169966765 169998373 169966765 169998373 + ENST00000337002.8@SEC62 ENST00000337002.8 protein_coding 169966765,169975608,169976946,169982707,169983161,169985805,169988240,169992594 169966858,169975716,169977051,169982911,169983253,169985865,169988359,169998373 Gene ID= ENSG00000008952.16 TPM= 195.6 Transcript Type= protein_coding chr3 170037929 170085403 170037929 170085403 + ENST00000355897.9@GPR160 ENST00000355897.9 protein_coding 170037929,170038915,170079774,170083905 170038215,170039043,170079897,170085403 Gene ID= ENSG00000173890.16 TPM= 1.81 Transcript Type= protein_coding chr3 170222365 170305981 170222365 170305981 + ENST00000295797.4@PRKCI ENST00000295797.4 protein_coding 170222365,170235230,170259969,170263379,170267915,170270421,170273286,170275229,170280227,170281166,170281882,170284461,170291854,170293383,170295911,170297304,170298995,170303040 170222770,170235351,170260058,170263429,170268000,170270561,170273340,170275287,170280403,170281263,170281968,170284596,170291941,170293508,170295990,170297393,170299110,170305981 Gene ID= ENSG00000163558.12 TPM= 10.87 Transcript Type= protein_coding chr3 170418865 170434099 170418865 170434099 + ENST00000064724.7@CLDN11 ENST00000064724.7 protein_coding 170418865,170423163,170432524 170419292,170423327,170434099 Gene ID= ENSG00000013297.10 TPM= 6.34 Transcript Type= protein_coding chr3 170864875 170870483 170864875 170870483 - ENST00000295830.12@RPL22L1 ENST00000295830.12 protein_coding 170870159,170868298,170868013,170864875 170870483,170868390,170868134,170866524 Gene ID= ENSG00000163584.17 TPM= 10.87 Transcript Type= protein_coding chr3 170888415 170908693 170888415 170908693 - ENST00000295822.6@EIF5A2 ENST00000295822.6 protein_coding 170908543,170907642,170906989,170894292,170888415 170908693,170907841,170907093,170894423,170893419 Gene ID= ENSG00000163577.7 TPM= 7.24 Transcript Type= protein_coding chr3 172040533 172400700 172040533 172400700 + transcript4344.chr3.nnic@FNDC3B transcript4344.chr3.nnic protein_coding 172040533,172081363,172112452,172133471,172226871,172247533,172251260,172285926,172295363,172298728,172307363,172310828,172328952,172330541,172333089,172334944,172337330,172341113,172343011,172344086,172346327,172347212,172352803,172362633,172378270,172380966,172397164 172040624,172081399,172112590,172133546,172226947,172247776,172251541,172285984,172295514,172298787,172307501,172310881,172329076,172330715,172333175,172335082,172337401,172341231,172343116,172344258,172346440,172347361,172353083,172362845,172378436,172381093,172400700 Gene ID= ENSG00000075420.12 TPM= 24.45 Transcript Type= NA chr3 172039628 172398771 172039628 172398771 + ENST00000415807.6@FNDC3B ENST00000415807.6 protein_coding 172039628,172112452,172133471,172226871,172247533,172251260,172285926,172295363,172298728,172307363,172310828,172328952,172330541,172333089,172334944,172337330,172341113,172343011,172344086,172346327,172347212,172352803,172362633,172378270,172380966,172397164 172039771,172112590,172133546,172226947,172247776,172251541,172285984,172295514,172298787,172307501,172310881,172329076,172330715,172333175,172335082,172337401,172341231,172343116,172344258,172346440,172347361,172353083,172362845,172378436,172381093,172398771 Gene ID= ENSG00000075420.12 TPM= 49.8 Transcript Type= protein_coding chr3 172039628 172187298 172039628 172187298 + ENST00000421757.5@FNDC3B ENST00000421757.5 protein_coding 172039628,172112452,172133471,172186712 172039771,172112590,172133546,172187298 Gene ID= ENSG00000075420.12 TPM= 2.72 Transcript Type= protein_coding chr3 172505509 172523522 172505509 172523522 - transcript4359.chr3.nic@TNFSF10 transcript4359.chr3.nic protein_coding 172523253,172514861,172509217,172505509 172523522,172514998,172509321,172506919 Gene ID= ENSG00000121858.10 TPM= 6.34 Transcript Type= NA chr3 172505508 172523507 172505508 172523507 - ENST00000241261.6@TNFSF10 ENST00000241261.6 protein_coding 172523253,172514861,172511617,172509217,172505508 172523507,172514998,172511659,172509321,172506919 Gene ID= ENSG00000121858.10 TPM= 70.63 Transcript Type= protein_coding chr3 172630249 172711218 172630249 172711218 - ENST00000475381.5@NCEH1 ENST00000475381.5 protein_coding 172710847,172647886,172645623,172635916,172630249 172711218,172648114,172645692,172636087,172634092 Gene ID= ENSG00000144959.9 TPM= 42.11 Transcript Type= protein_coding chr3 172630651 172711065 172630651 172711065 - transcript4363.chr3.nnic@NCEH1 transcript4363.chr3.nnic protein_coding 172710850,172647886,172645623,172635916,172630651 172711065,172648034,172645692,172636087,172634092 Gene ID= ENSG00000144959.9 TPM= 4.07 Transcript Type= NA chr3 172750704 172821474 172750704 172821474 + ENST00000392692.7@ECT2 ENST00000392692.7 protein_coding 172750704,172754509,172755295,172755483,172756983,172758980,172760156,172761610,172762416,172762691,172762910,172764278,172769007,172773903,172782163,172783799,172784707,172786493,172802616,172802861,172805731,172807770,172815604,172816691,172820148 172750857,172754660,172755374,172755575,172757165,172759069,172760263,172761683,172762546,172762806,172762972,172764500,172769143,172774022,172782231,172783909,172784803,172786574,172802694,172802980,172805869,172807924,172815711,172816837,172821474 Gene ID= ENSG00000114346.13 TPM= 3.92 Transcript Type= protein_coding chr3 172750685 172821473 172750685 172821473 + ENST00000540509.5@ECT2 ENST00000540509.5 protein_coding 172750685,172752150,172754509,172755295,172756983,172758980,172760156,172761610,172762416,172762691,172762910,172764278,172769007,172773903,172782163,172783799,172784707,172786493,172802616,172802861,172805731,172807770,172815604,172816691,172820148 172750857,172752472,172754660,172755374,172757165,172759069,172760263,172761683,172762546,172762806,172762972,172764500,172769143,172774022,172782231,172783909,172784803,172786574,172802694,172802980,172805869,172807924,172815711,172816837,172821473 Gene ID= ENSG00000114346.13 TPM= 1.2 Transcript Type= protein_coding chr3 172750682 172821474 172750682 172821474 + ENST00000232458.9@ECT2 ENST00000232458.9 protein_coding 172750682,172754509,172755295,172756983,172758980,172760156,172761610,172762416,172762691,172762910,172764278,172769007,172773903,172782163,172783799,172784707,172786493,172802616,172802861,172805731,172807770,172815604,172816691,172820148 172750857,172754660,172755374,172757165,172759069,172760263,172761683,172762546,172762806,172762972,172764500,172769143,172774022,172782231,172783909,172784803,172786574,172802694,172802980,172805869,172807924,172815711,172816837,172821474 Gene ID= ENSG00000114346.13 TPM= 3.92 Transcript Type= protein_coding chr3 179023739 179072215 179023739 179072215 - ENST00000432729.5@ZMAT3 ENST00000432729.5 protein_coding 179071595,179071327,179067483,179030880,179027646,179027423,179023739 179072215,179071447,179067809,179030999,179027812,179027523,179025225 Gene ID= ENSG00000172667.10 TPM= 6.34 Transcript Type= protein_coding chr3 179017223 179072279 179017223 179072279 - ENST00000311417.6@ZMAT3 ENST00000311417.6 protein_coding 179071595,179067483,179030880,179027646,179027423,179017223 179072279,179067809,179030999,179027812,179027523,179025228 Gene ID= ENSG00000172667.10 TPM= 11.77 Transcript Type= protein_coding chr3 179322850 179334720 179322850 179334720 + transcript4386.chr3.nic@ZNF639 transcript4386.chr3.nic protein_coding 179322850,179325042,179327561,179328283,179329618,179329934,179332989,179333269 179323291,179325322,179327631,179328351,179329728,179330055,179333123,179334720 Gene ID= ENSG00000121864.9 TPM= 4.07 Transcript Type= NA chr3 179322876 179334720 179322876 179334720 + transcript4388.chr3.nnic@ZNF639 transcript4388.chr3.nnic protein_coding 179322876,179324950,179327561,179328283,179329618,179329934,179332989,179333269 179323291,179325322,179327631,179328351,179329728,179330007,179333123,179334720 Gene ID= ENSG00000121864.9 TPM= 2.26 Transcript Type= NA chr3 179322991 179334614 179322991 179334614 + ENST00000496856.5@ZNF639 ENST00000496856.5 protein_coding 179322991,179327561,179328283,179329618,179332989,179333269 179323291,179327631,179328351,179329728,179333123,179334614 Gene ID= ENSG00000121864.9 TPM= 7.24 Transcript Type= protein_coding chr3 179347692 179394931 179347692 179394931 + ENST00000471841.5@MFN1 ENST00000471841.5 protein_coding 179347692,179348845,179351900,179358840,179362358,179364297,179365118,179367439,179368036,179375220,179377042,179377344,179378341,179378585,179385569,179386433,179390004,179391981 179347810,179348963,179352035,179359002,179362482,179364405,179365225,179367592,179368103,179375341,179377168,179377448,179378443,179378814,179385721,179386629,179390138,179394931 Gene ID= ENSG00000171109.18 TPM= 24.45 Transcript Type= protein_coding chr3 179562886 179588407 179562886 179588407 + ENST00000450518.6@ACTL6A ENST00000450518.6 protein_coding 179562886,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930 179562973,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588407 Gene ID= ENSG00000136518.16 TPM= 7.7 Transcript Type= protein_coding chr3 179562880 179588408 179562880 179588408 + ENST00000429709.6@ACTL6A ENST00000429709.6 protein_coding 179562880,179569824,179570067,179573369,179574370,179576217,179576620,179576824,179580640,179580894,179581140,179583353,179586546,179587930 179563117,179569900,179570241,179573469,179574467,179576311,179576726,179576913,179580701,179581008,179581220,179583448,179586632,179588408 Gene ID= ENSG00000136518.16 TPM= 37.58 Transcript Type= protein_coding chr3 179571528 179604657 179571528 179604657 - transcript4410.chr3.nnic@MRPL47 transcript4410.chr3.nnic protein_coding 179604527,179602652,179601730,179598675,179593765,179592644,179576762,179571528 179604657,179602797,179601790,179598771,179593895,179592739,179576852,179571770 Gene ID= ENSG00000136522.13 TPM= 1.81 Transcript Type= NA chr3 179588285 179604654 179588285 179604654 - ENST00000476781.5@MRPL47 ENST00000476781.5 protein_coding 179604527,179602652,179601730,179598675,179593765,179592644,179588285 179604654,179602797,179601790,179598771,179593895,179592739,179588995 Gene ID= ENSG00000136522.13 TPM= 39.84 Transcript Type= protein_coding chr3 179588831 179604649 179588831 179604649 - ENST00000392659.2@MRPL47 ENST00000392659.2 protein_coding 179604527,179601730,179598675,179593765,179592644,179588831 179604649,179601790,179598771,179593895,179592739,179588995 Gene ID= ENSG00000136522.13 TPM= 6.34 Transcript Type= protein_coding chr3 179604702 179624497 179604702 179624497 + ENST00000259037.7@NDUFB5 ENST00000259037.7 protein_coding 179604702,179614971,179615983,179616983,179618415,179623920 179604939,179615059,179616049,179617044,179618521,179624497 Gene ID= ENSG00000136521.12 TPM= 44.37 Transcript Type= protein_coding chr3 179652788 179786407 179652788 179786407 + transcript4417.chr3.nnic@USP13 transcript4417.chr3.nnic protein_coding 179652788,179681878,179690241,179701008,179706934,179708773,179719940,179721402,179730189,179730616,179740247,179742197,179745043,179752285,179754732,179757052,179761112,179764002,179765695,179781739,179784048,179785732 179653393,179682003,179690301,179701129,179707076,179708957,179720034,179721589,179730260,179730709,179740372,179742350,179745217,179752373,179754854,179757078,179761255,179764168,179765848,179781823,179784249,179786407 Gene ID= ENSG00000058056.8 TPM= 12.68 Transcript Type= NA chr3 179652755 179789401 179652755 179789401 + ENST00000263966.7@USP13 ENST00000263966.7 protein_coding 179652755,179681878,179690241,179701008,179706934,179708773,179719940,179721402,179730189,179730616,179740247,179742197,179745043,179752285,179754732,179757052,179761112,179764002,179765695,179781739,179784048 179653393,179682003,179690301,179701129,179707076,179708957,179720034,179721589,179730260,179730709,179740372,179742350,179745217,179752373,179754854,179757078,179761255,179764168,179765848,179781823,179789401 Gene ID= ENSG00000058056.8 TPM= 27.17 Transcript Type= protein_coding chr3 179653101 179789399 179653101 179789399 + transcript4423.chr3.nnic@USP13 transcript4423.chr3.nnic protein_coding 179653101,179690241,179701008,179706934,179708773,179719940,179721402,179730189,179730616,179740247,179742197,179745043,179752285,179754732,179757052,179761112,179764002,179765695,179781739,179784048 179653393,179690301,179701129,179707076,179708957,179720034,179721589,179730260,179730709,179740372,179742350,179745217,179752373,179754854,179757078,179761255,179764168,179765848,179781823,179789399 Gene ID= ENSG00000058056.8 TPM= 7.24 Transcript Type= NA chr3 179653106 179713461 179653106 179713461 + transcript4425.chr3.nnic@USP13 transcript4425.chr3.nnic protein_coding 179653106,179681878,179690241,179701008,179706934,179708773,179710714,179711669 179653393,179682003,179690301,179701129,179707076,179708957,179710839,179713461 Gene ID= ENSG00000058056.8 TPM= 1.81 Transcript Type= NA chr3 180602130 180610978 180602130 180610978 + ENST00000296015.8@TTC14 ENST00000296015.8 protein_coding 180602130,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648,180608701,180609630 180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180607765,180608810,180610978 Gene ID= ENSG00000163728.10 TPM= 10.87 Transcript Type= protein_coding chr3 180602193 180610974 180602193 180610974 + ENST00000412756.6@TTC14 ENST00000412756.6 protein_coding 180602193,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648 180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180610974 Gene ID= ENSG00000163728.10 TPM= 8.15 Transcript Type= protein_coding chr3 180602211 180617828 180602211 180617828 + ENST00000382584.8@TTC14 ENST00000382584.8 protein_coding 180602211,180602891,180603124,180604225,180604478,180604852,180605766,180606253,180606481,180607648,180608701,180609630,180617380 180602422,180603015,180603323,180604309,180604607,180605007,180605837,180606372,180606603,180607765,180608810,180610003,180617828 Gene ID= ENSG00000163728.10 TPM= 1.81 Transcript Type= protein_coding chr3 180912302 180982753 180912302 180982753 + ENST00000357559.8@FXR1 ENST00000357559.8 protein_coding 180912302,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158,180975313,180976122 180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180970358,180975404,180982753 Gene ID= ENSG00000114416.17 TPM= 11.77 Transcript Type= protein_coding chr3 180912668 180976547 180912668 180976547 + transcript4438.chr3.nic@FXR1 transcript4438.chr3.nic protein_coding 180912668,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180975313,180976122 180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180975404,180976547 Gene ID= ENSG00000114416.17 TPM= 1.81 Transcript Type= NA chr3 180912662 180972099 180912662 180972099 + transcript4440.chr3.nic@FXR1 transcript4440.chr3.nic protein_coding 180912662,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180963028,180968051,180970158 180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180962940,180963090,180968254,180972099 Gene ID= ENSG00000114416.17 TPM= 17.21 Transcript Type= NA chr3 180912662 180971969 180912662 180971969 + transcript4445.chr3.nic@FXR1 transcript4445.chr3.nic protein_coding 180912662,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158 180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180971969 Gene ID= ENSG00000114416.17 TPM= 3.62 Transcript Type= NA chr3 180912678 180976553 180912678 180976553 + ENST00000472339.5@FXR1 ENST00000472339.5 protein_coding 180912678,180933334,180935138,180947865,180948347,180948721,180949227,180951298,180953762,180957819,180961468,180962883,180968051,180970158,180976122 180912736,180933386,180935231,180947936,180948495,180948814,180949343,180951468,180953840,180957928,180961554,180963090,180968254,180970358,180976553 Gene ID= ENSG00000114416.17 TPM= 6.34 Transcript Type= retained_intron chr3 180983709 180989773 180983709 180989773 - ENST00000382564.6@DNAJC19 ENST00000382564.6 protein_coding 180989600,180988178,180988023,180986943,180985926,180983709 180989773,180988229,180988096,180987022,180985996,180984710 Gene ID= ENSG00000205981.6 TPM= 103.23 Transcript Type= protein_coding chr3 182793471 182914749 182793471 182914749 + transcript4455.chr3.nic@ATP11B transcript4455.chr3.nic protein_coding 182793471,182820260,182828120,182829672,182836035,182836342,182837071,182842075,182845458,182848476,182857878,182859162,182865456,182866268,182867376,182869078,182869228,182872356,182873812,182879496,182880879,182884753,182885951,182887586,182889410,182896700,182897303,182898607,182913861 182793786,182820376,182828209,182829752,182836142,182836470,182837174,182842122,182845522,182848557,182858028,182859359,182865698,182866443,182867444,182869151,182869331,182872537,182874015,182879649,182880981,182884898,182886010,182887713,182889548,182896765,182897406,182898772,182914749 Gene ID= ENSG00000058063.15 TPM= 8.15 Transcript Type= NA chr3 182938074 182980643 182938074 182980643 - ENST00000292782.8@DCUN1D1 ENST00000292782.8 protein_coding 182980487,182965537,182963881,182961226,182947550,182947238,182938074 182980643,182965753,182964049,182961356,182947632,182947334,182945173 Gene ID= ENSG00000043093.13 TPM= 37.13 Transcript Type= protein_coding chr3 183015218 183099587 183015218 183099587 - ENST00000265594.8@MCCC1 ENST00000265594.8 protein_coding 183099352,183094559,183092409,183086693,183072366,183071210,183070999,183057311,183052159,183045413,183041567,183039026,183037218,183033991,183025755,183022417,183020130,183017266,183015218 183099587,183094605,183092545,183086788,183072487,183071357,183071120,183057422,183052240,183045540,183041750,183039135,183037434,183034077,183025804,183022554,183020237,183017337,183015566 Gene ID= ENSG00000078070.12 TPM= 126.48 Transcript Type= protein_coding chr3 183192652 183428971 183192652 183428971 - transcript4484.chr3.nic@MCF2L2 transcript4484.chr3.nic protein_coding 183427902,183389696,183379297,183341540,183338800,183323235,183318068,183311648,183310915,183309716,183300005,183296976,183295300,183289120,183276872,183230951,183229666,183228297,183224098,183223346,183219856,183215969,183207608,183206122,183205876,183195222,183192652 183428971,183389779,183379411,183341630,183338919,183323351,183318217,183311772,183311029,183309835,183300196,183297167,183295477,183289220,183276957,183231017,183229781,183228366,183224190,183223438,183219924,183216094,183207823,183206214,183205954,183195255,183193096 Gene ID= ENSG00000053524.12 TPM= 2.26 Transcript Type= NA chr3 183298446 183428565 183298446 183428565 - transcript4488.chr3.nic@MCF2L2 transcript4488.chr3.nic protein_coding 183427902,183389696,183379297,183341540,183338800,183323235,183318068,183311648,183310915,183309716,183298446 183428565,183389779,183379411,183341630,183338919,183323351,183318217,183311772,183311029,183309835,183300196 Gene ID= ENSG00000053524.12 TPM= 2.26 Transcript Type= NA chr3 183447607 183456016 183447607 183456016 + transcript4494.chr3.nnic@LINC00888 transcript4494.chr3.nnic transcribed_unprocessed_pseudogene 183447607,183452078,183454012,183455199 183447765,183452351,183454093,183456016 Gene ID= ENSG00000240024.5 TPM= 3.62 Transcript Type= NA chr3 183447608 183456013 183447608 183456013 + ENST00000471496.5@LINC00888 ENST00000471496.5 transcribed_unprocessed_pseudogene 183447608,183452078,183454012,183455199 183447765,183452512,183454093,183456013 Gene ID= ENSG00000240024.5 TPM= 3.62 Transcript Type= processed_transcript chr3 183447608 183456016 183447608 183456016 + transcript4496.chr3.nnic@LINC00888 transcript4496.chr3.nnic transcribed_unprocessed_pseudogene 183447608,183452078,183454012,183455199 183447947,183452351,183454093,183456016 Gene ID= ENSG00000240024.5 TPM= 4.53 Transcript Type= NA chr3 183447608 183456016 183447608 183456016 + transcript4497.chr3.nnic@LINC00888 transcript4497.chr3.nnic transcribed_unprocessed_pseudogene 183447608,183452078,183453992,183455199 183447947,183452512,183454093,183456016 Gene ID= ENSG00000240024.5 TPM= 2.72 Transcript Type= NA chr3 183635624 183680943 183635624 183680943 + transcript4507.chr3.nic@KLHL24 transcript4507.chr3.nic protein_coding 183635624,183636221,183643480,183650296,183663458,183664921,183671034,183672296,183679086 183635747,183636311,183643542,183651276,183663642,183665039,183671222,183672484,183680943 Gene ID= ENSG00000114796.15 TPM= 2.04 Transcript Type= NA chr3 183635623 183684477 183635623 183684477 + ENST00000454652.6@KLHL24 ENST00000454652.6 protein_coding 183635623,183636221,183643480,183650296,183663458,183664921,183671034,183672296,183679086 183635793,183636311,183643542,183651276,183663642,183665039,183671222,183672484,183684477 Gene ID= ENSG00000114796.15 TPM= 3.85 Transcript Type= protein_coding chr3 183635633 183680944 183635633 183680944 + transcript4511.chr3.nic@KLHL24 transcript4511.chr3.nic protein_coding 183635633,183643480,183650296,183663458,183664921,183671034,183672296,183679086 183635747,183643542,183651276,183663642,183665039,183671222,183672484,183680944 Gene ID= ENSG00000114796.15 TPM= 2.04 Transcript Type= NA chr3 183635612 183680943 183635612 183680943 + transcript4512.chr3.nic@KLHL24 transcript4512.chr3.nic protein_coding 183635612,183650296,183663458,183664921,183671034,183672296,183679086 183635793,183651276,183663642,183665039,183671222,183672484,183680943 Gene ID= ENSG00000114796.15 TPM= 2.94 Transcript Type= NA chr3 183697818 183812625 183697818 183812625 + ENST00000305135.9@YEATS2 ENST00000305135.9 protein_coding 183697818,183715144,183717651,183718500,183721891,183724419,183728690,183736718,183747672,183752073,183754126,183756528,183758862,183761507,183762097,183772305,183773633,183775915,183777542,183786125,183790797,183797923,183798891,183800466,183801455,183803256,183803987,183806866,183808030,183809097,183810475 183697993,183715262,183717748,183718592,183722136,183724531,183728851,183736829,183747716,183752253,183754365,183756689,183758965,183761614,183762279,183772563,183773794,183776123,183777700,183786301,183790980,183798051,183798989,183800568,183801528,183803335,183804188,183807092,183808104,183809170,183812625 Gene ID= ENSG00000163872.15 TPM= 6.34 Transcript Type= protein_coding chr3 183815879 183884902 183815879 183884902 - transcript4518.chr3.nnic@AC131160.1 transcript4518.chr3.nnic protein_coding 183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183825147,183817994,183815879 183884902,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183826732,183818111,183817436 Gene ID= ENSG00000283765.1 TPM= 5.43 Transcript Type= NA chr3 183824331 183884902 183824331 183884902 - transcript4519.chr3.nnic@AC131160.1 transcript4519.chr3.nnic protein_coding 183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183824331 183884902,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183826732 Gene ID= ENSG00000283765.1 TPM= 2.72 Transcript Type= NA chr3 183829385 183884907 183829385 183884907 - ENST00000317096.8@PARL ENST00000317096.8 protein_coding 183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833724,183833492,183829385 183884907,183868060,183866765,183862801,183844326,183842447,183840640,183833825,183833589,183829709 Gene ID= ENSG00000175193.13 TPM= 34.86 Transcript Type= protein_coding chr3 183829388 183884902 183829388 183884902 - transcript4527.chr3.nic@PARL transcript4527.chr3.nic protein_coding 183884722,183867865,183866625,183862753,183844231,183842298,183840570,183833492,183829388 183884902,183868060,183866765,183862801,183844326,183842447,183840640,183833589,183829709 Gene ID= ENSG00000175193.13 TPM= 2.26 Transcript Type= NA chr3 183829390 183884888 183829390 183884888 - ENST00000311101.9@PARL ENST00000311101.9 protein_coding 183884722,183867865,183866625,183862753,183844231,183840570,183833724,183833492,183829390 183884888,183868060,183866765,183862801,183844326,183840640,183833825,183833589,183829709 Gene ID= ENSG00000175193.13 TPM= 1.36 Transcript Type= protein_coding chr3 183829397 183884855 183829397 183884855 - ENST00000435888.5@PARL ENST00000435888.5 protein_coding 183884722,183867865,183866625,183862753,183844231,183840570,183833492,183829397 183884855,183868060,183866765,183862801,183844326,183840640,183833589,183829709 Gene ID= ENSG00000175193.13 TPM= 1.36 Transcript Type= protein_coding chr3 183919934 184018015 183919934 184018015 - ENST00000334444.10@ABCC5 ENST00000334444.10 protein_coding 184017830,184014264,183989226,183988572,183987770,183982774,183982451,183981727,183978503,183977517,183971563,183967695,183965377,183965185,183963385,183961511,183959733,183953086,183951857,183951441,183949972,183949753,183947324,183945850,183942727,183937901,183928747,183927330,183925555,183919934 184018015,184014447,183989383,183988727,183987917,183983007,183982624,183981874,183978651,183977624,183971919,183967766,183965501,183965257,183963588,183961654,183959835,183953270,183952003,183951570,183950125,183949881,183947510,183945939,183942916,183938060,183928825,183927443,183925719,183921401 Gene ID= ENSG00000114770.16 TPM= 1.81 Transcript Type= protein_coding chr3 183983753 184017889 183983753 184017889 - ENST00000392579.6@ABCC5 ENST00000392579.6 protein_coding 184017830,184014264,183989226,183988572,183987770,183983753 184017889,184014447,183989383,183988727,183987917,183984894 Gene ID= ENSG00000114770.16 TPM= 3.62 Transcript Type= protein_coding chr3 183983753 184017889 183983753 184017889 - ENST00000443376.5@ABCC5 ENST00000443376.5 protein_coding 184017830,184014264,183989226,183988572,183987770,183985304,183983753 184017889,184014447,183989383,183988727,183987917,183985455,183984894 Gene ID= ENSG00000114770.16 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr3 183983753 184017863 183983753 184017863 - ENST00000427120.6@ABCC5 ENST00000427120.6 protein_coding 184017830,184014264,183989226,183988572,183983753 184017863,184014447,183989383,183988727,183987917 Gene ID= ENSG00000114770.16 TPM= 2.72 Transcript Type= protein_coding chr3 183983753 184017889 183983753 184017889 - ENST00000382494.6@ABCC5 ENST00000382494.6 protein_coding 184017830,184014264,183989226,183988572,183987770,183985304,183983753 184017889,184014447,183989383,183988727,183987917,183985378,183984894 Gene ID= ENSG00000114770.16 TPM= 1.81 Transcript Type= protein_coding chr3 184135376 184145314 184135376 184145314 + transcript4543.chr3.nic@EIF2B5 transcript4543.chr3.nic protein_coding 184135376,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184144099,184144597,184144884 184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184143565,184144224,184144707,184145314 Gene ID= ENSG00000145191.12 TPM= 7.24 Transcript Type= NA chr3 184135356 184145314 184135356 184145314 + transcript4548.chr3.nic@EIF2B5 transcript4548.chr3.nic protein_coding 184135356,184136612,184137898,184138166,184140080,184142237,184142502,184142779,184143052,184144099,184144597,184144884 184135580,184137805,184138075,184138246,184142070,184142378,184142603,184142886,184143565,184144224,184144707,184145314 Gene ID= ENSG00000145191.12 TPM= 5.43 Transcript Type= NA chr3 184135264 184145310 184135264 184145310 + ENST00000273783.7@EIF2B5 ENST00000273783.7 protein_coding 184135264,184136612,184137620,184137898,184138166,184140080,184140418,184141925,184142237,184142502,184142779,184143052,184143442,184144099,184144597,184144884 184135580,184136736,184137805,184138075,184138246,184140157,184140730,184142070,184142378,184142603,184142886,184143142,184143565,184144224,184144707,184145310 Gene ID= ENSG00000145191.12 TPM= 86.03 Transcript Type= protein_coding chr3 184155336 184170943 184155336 184170943 + transcript4553.chr3.nnic@DVL3 transcript4553.chr3.nnic protein_coding 184155336,184155563,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166826,184167580,184167898,184170006,184170319 184155448,184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184170943 Gene ID= ENSG00000161202.17 TPM= 4.15 Transcript Type= NA chr3 184155388 184173610 184155388 184173610 + ENST00000313143.7@DVL3 ENST00000313143.7 protein_coding 184155388,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166826,184167580,184167898,184170006,184170319 184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184173610 Gene ID= ENSG00000161202.17 TPM= 138.17 Transcript Type= protein_coding chr3 184155560 184170873 184155560 184170873 + ENST00000431765.5@DVL3 ENST00000431765.5 protein_coding 184155560,184163657,184164267,184164492,184164796,184165113,184165422,184166126,184166446,184166606,184166877,184167580,184167898,184170006,184170319 184155796,184163726,184164388,184164601,184164931,184165206,184165491,184166265,184166522,184166673,184166975,184167711,184168065,184170221,184170873 Gene ID= ENSG00000161202.17 TPM= 1.92 Transcript Type= protein_coding chr3 184174689 184184091 184174689 184184091 + ENST00000382456.7@AP2M1 ENST00000382456.7 protein_coding 184174689,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757,184183482 184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184182868,184184091 Gene ID= ENSG00000161203.13 TPM= 1398.06 Transcript Type= protein_coding chr3 184174810 184184091 184174810 184184091 + transcript4589.chr3.nic@AP2M1 transcript4589.chr3.nic protein_coding 184174810,184176951,184178857,184180169,184180849,184181085,184181696,184181912,184182151,184182757 184174959,184177067,184179122,184180251,184180984,184181226,184181815,184182047,184182248,184184091 Gene ID= ENSG00000161203.13 TPM= 59.2 Transcript Type= NA chr3 184174855 184184091 184174855 184184091 + ENST00000292807.9@AP2M1 ENST00000292807.9 protein_coding 184174855,184176951,184178857,184180169,184180645,184180849,184181085,184181696,184181912,184182151,184182757,184183482 184174959,184177067,184179122,184180251,184180650,184180984,184181226,184181815,184182047,184182248,184182868,184184091 Gene ID= ENSG00000161203.13 TPM= 8.5 Transcript Type= protein_coding chr3 184186105 184195197 184186105 184195197 + transcript4621.chr3.nic@ABCF3 transcript4621.chr3.nic protein_coding 184186105,184186507,184186796,184187397,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540 184186280,184186654,184186875,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184195197 Gene ID= ENSG00000161204.11 TPM= 14.84 Transcript Type= NA chr3 184186023 184194007 184186023 184194007 + ENST00000429586.6@ABCF3 ENST00000429586.6 protein_coding 184186023,184186507,184186796,184187397,184187664,184187861,184188141,184188761,184188929,184189088,184189255,184189388,184189557,184189855,184190999,184191123,184192601,184192805,184193102,184193365,184193540 184186280,184186654,184186875,184187443,184187761,184187983,184188407,184188841,184188988,184189144,184189277,184189443,184189757,184189931,184191043,184191255,184192689,184192896,184193234,184193452,184194007 Gene ID= ENSG00000161204.11 TPM= 416.03 Transcript Type= protein_coding chr3 184229415 184242341 184229415 184242341 + transcript4652.chr3.nnic@VWA5B2 transcript4652.chr3.nnic protein_coding 184229415,184230380,184230747,184233178,184233576,184234266,184234631,184235153,184236152,184236343,184236638,184237226,184238303,184238560,184239394,184239689,184240791,184241024,184241187,184241490 184229713,184230667,184230917,184233397,184233733,184234397,184234755,184235308,184236262,184236551,184236749,184237411,184238474,184238873,184239583,184240036,184240928,184241107,184241404,184242341 Gene ID= ENSG00000145198.14 TPM= 47.71 Transcript Type= NA chr3 184229587 184242341 184229587 184242341 + transcript4655.chr3.nnic@VWA5B2 transcript4655.chr3.nnic protein_coding 184229587,184230380,184230747,184233178,184233576,184234266,184234631,184235153,184236152,184236343,184236638,184237226,184238303,184238563,184239394,184239689,184240791,184241024,184241211,184241490 184229713,184230667,184230917,184233397,184233733,184234397,184234755,184235308,184236262,184236551,184236749,184237411,184238474,184238873,184239583,184240036,184240928,184241107,184241404,184242341 Gene ID= ENSG00000145198.14 TPM= 5.98 Transcript Type= NA chr3 184229545 184242341 184229545 184242341 + transcript4660.chr3.nnic@VWA5B2 transcript4660.chr3.nnic protein_coding 184229545,184230380,184230747,184233178,184233576,184234266,184234631,184235153,184236152,184236343,184236638,184237226,184238303,184238560,184239394,184239689,184240791,184241024,184241187,184241490 184229796,184230667,184230917,184233397,184233733,184234397,184234755,184235308,184236262,184236551,184236749,184237411,184238474,184238873,184239583,184240036,184240928,184241107,184241404,184242341 Gene ID= ENSG00000145198.14 TPM= 10.59 Transcript Type= NA chr3 184230429 184242329 184230429 184242329 + ENST00000426955.6@VWA5B2 ENST00000426955.6 protein_coding 184230429,184230747,184233178,184233576,184234266,184234631,184235153,184236152,184236343,184236638,184237226,184238303,184238563,184239394,184239689,184240791,184241024,184241187,184241490 184230667,184230917,184233397,184233733,184234397,184234755,184235308,184236262,184236551,184236749,184237411,184238474,184238873,184239583,184240036,184240928,184241107,184241404,184242329 Gene ID= ENSG00000145198.14 TPM= 41.46 Transcript Type= protein_coding chr3 184242329 184249529 184242329 184249529 - transcript4686.chr3.nic@ALG3 transcript4686.chr3.nic protein_coding 184248782,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242329 184249529,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676 Gene ID= ENSG00000214160.9 TPM= 48.9 Transcript Type= NA chr3 184242334 184248971 184242334 184248971 - ENST00000397676.7@ALG3 ENST00000397676.7 protein_coding 184248745,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242334 184248971,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676 Gene ID= ENSG00000214160.9 TPM= 57.05 Transcript Type= protein_coding chr3 184242425 184249548 184242425 184249548 - ENST00000445626.6@ALG3 ENST00000445626.6 protein_coding 184249226,184245713,184245468,184245198,184244601,184243791,184243554,184242813,184242425 184249548,184245812,184245615,184245358,184244721,184243996,184243630,184242957,184242676 Gene ID= ENSG00000214160.9 TPM= 5.43 Transcript Type= protein_coding chr3 184249650 184259585 184249650 184259585 + ENST00000324557.8@ECE2 ENST00000324557.8 protein_coding 184249650,184257473,184258288 184249890,184257756,184259585 Gene ID= ENSG00000145194.17 TPM= 11.77 Transcript Type= protein_coding chr3 184259213 184261463 184259213 184261463 - ENST00000296238.3@CAMK2N2 ENST00000296238.3 protein_coding 184261117,184259213 184261463,184260227 Gene ID= ENSG00000163888.3 TPM= 4.53 Transcript Type= protein_coding chr3 184314533 184335358 184314533 184335358 + transcript4725.chr3.nic@EIF4G1 transcript4725.chr3.nic protein_coding 184314533,184315489,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323405,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335358 Gene ID= ENSG00000114867.20 TPM= 31.49 Transcript Type= NA chr3 184314495 184335357 184314495 184335357 + ENST00000352767.7@EIF4G1 ENST00000352767.7 protein_coding 184314495,184315763,184316132,184316713,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184314674,184315856,184316218,184316733,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335357 Gene ID= ENSG00000114867.20 TPM= 14.43 Transcript Type= protein_coding chr3 184315157 184335358 184315157 184335358 + transcript4733.chr3.nic@EIF4G1 transcript4733.chr3.nic protein_coding 184315157,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335358 Gene ID= ENSG00000114867.20 TPM= 20.76 Transcript Type= NA chr3 184314495 184335353 184314495 184335353 + ENST00000346169.6@EIF4G1 ENST00000346169.6 protein_coding 184314495,184315489,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184314674,184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353 Gene ID= ENSG00000114867.20 TPM= 62.11 Transcript Type= protein_coding chr3 184314542 184335351 184314542 184335351 + ENST00000392537.6@EIF4G1 ENST00000392537.6 protein_coding 184314542,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184314674,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335351 Gene ID= ENSG00000114867.20 TPM= 14.84 Transcript Type= protein_coding chr3 184314606 184335353 184314606 184335353 + ENST00000350481.9@EIF4G1 ENST00000350481.9 protein_coding 184314606,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323408,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184314674,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335353 Gene ID= ENSG00000114867.20 TPM= 13.44 Transcript Type= protein_coding chr3 184315166 184335358 184315166 184335358 + ENST00000342981.8@EIF4G1 ENST00000342981.8 protein_coding 184315166,184315763,184316132,184317321,184317717,184319689,184320630,184320927,184321282,184322362,184322544,184322821,184323083,184323405,184323780,184324201,184324878,184325269,184325480,184325851,184326527,184326881,184327216,184327586,184327830,184328631,184328909,184331266,184331472,184331728,184331946,184334727 184315545,184315856,184316218,184317497,184317816,184319801,184320722,184320993,184322103,184322450,184322730,184322954,184323241,184323593,184323977,184324347,184325114,184325373,184325639,184325951,184326629,184326983,184327448,184327704,184328002,184328756,184328990,184331364,184331606,184331809,184332086,184335358 Gene ID= ENSG00000114867.20 TPM= 29.68 Transcript Type= protein_coding chr3 184335937 184346273 184335937 184346273 + ENST00000340957.9@FAM131A ENST00000340957.9 protein_coding 184335937,184337311,184341724,184342066,184342744,184344495 184336123,184337371,184341817,184342248,184342860,184346273 Gene ID= ENSG00000175182.14 TPM= 14.94 Transcript Type= protein_coding chr3 184346187 184361611 184346187 184361611 - transcript4746.chr3.nic@CLCN2 transcript4746.chr3.nic protein_coding 184361417,184358975,184358682,184358182,184357962,184357779,184357620,184357362,184357182,184356993,184355694,184355374,184354904,184354548,184354101,184353662,184353250,184353033,184352737,184352443,184352293,184346935,184346187 184361611,184359131,184358813,184358310,184358095,184357856,184357698,184357487,184357266,184357094,184355778,184355529,184354973,184354658,184354314,184353795,184353422,184353147,184352810,184352496,184352331,184347021,184346800 Gene ID= ENSG00000114859.15 TPM= 2.26 Transcript Type= NA chr3 184346187 184363274 184346187 184363274 - transcript4749.chr3.nic@CLCN2 transcript4749.chr3.nic protein_coding 184361417,184358975,184358682,184358182,184357962,184357779,184357620,184357362,184357182,184356993,184355694,184355374,184354904,184354548,184354101,184353662,184353250,184353033,184352293,184352013,184346935,184346187 184363274,184359131,184358813,184358310,184358095,184357856,184357698,184357487,184357266,184357094,184355778,184355529,184354973,184354658,184354314,184353795,184353422,184353147,184352810,184352117,184347021,184346800 Gene ID= ENSG00000114859.15 TPM= 1.81 Transcript Type= NA chr3 184346185 184361651 184346185 184361651 - ENST00000265593.8@CLCN2 ENST00000265593.8 protein_coding 184361417,184358975,184358682,184358182,184357962,184357779,184357620,184357362,184357182,184356993,184355694,184355374,184354904,184354548,184354101,184353662,184353250,184353033,184352737,184352443,184352293,184352013,184346935,184346185 184361651,184359131,184358813,184358310,184358095,184357856,184357698,184357487,184357266,184357094,184355778,184355529,184354973,184354658,184354314,184353795,184353422,184353147,184352810,184352496,184352331,184352117,184347021,184346800 Gene ID= ENSG00000114859.15 TPM= 15.39 Transcript Type= protein_coding chr3 184361737 184368595 184361737 184368595 + transcript4763.chr3.nnic@POLR2H transcript4763.chr3.nnic protein_coding 184361737,184363226,184364966,184365133,184366717,184368177 184362146,184363565,184365049,184365226,184366800,184368595 Gene ID= ENSG00000163882.9 TPM= 2.72 Transcript Type= NA chr3 184361740 184368595 184361740 184368595 + transcript4764.chr3.nic@POLR2H transcript4764.chr3.nic protein_coding 184361740,184363116,184364966,184365133,184366717,184368177 184362146,184363565,184365049,184365226,184366800,184368595 Gene ID= ENSG00000163882.9 TPM= 3.62 Transcript Type= NA chr3 184362607 184368595 184362607 184368595 + transcript4766.chr3.nnic@POLR2H transcript4766.chr3.nnic protein_coding 184362607,184362873,184364966,184365133,184366717,184368177 184362724,184363565,184365049,184365226,184366800,184368595 Gene ID= ENSG00000163882.9 TPM= 2.72 Transcript Type= NA chr3 184363399 184368595 184363399 184368595 + transcript4768.chr3.nnic@POLR2H transcript4768.chr3.nnic protein_coding 184363399,184366717,184368177 184363565,184366800,184368595 Gene ID= ENSG00000163882.9 TPM= 3.62 Transcript Type= NA chr3 184361718 184368594 184361718 184368594 + ENST00000456318.5@POLR2H ENST00000456318.5 protein_coding 184361718,184362873,184364966,184365133,184366717,184368177 184362146,184363565,184365049,184365226,184366800,184368594 Gene ID= ENSG00000163882.9 TPM= 48.9 Transcript Type= protein_coding chr3 184363434 184368596 184363434 184368596 + ENST00000429568.1@POLR2H ENST00000429568.1 protein_coding 184363434,184364966,184365133,184366717,184368113 184363565,184365049,184365226,184366800,184368596 Gene ID= ENSG00000163882.9 TPM= 3.62 Transcript Type= protein_coding chr3 184380339 184389831 184380339 184389831 + transcript4774.chr3.nnic@CHRD transcript4774.chr3.nnic protein_coding 184380339,184380692,184381235,184381496,184381716,184381933,184382389,184382634,184382856,184383016,184383312,184383523,184384537,184385018,184386046,184386845,184387051,184387374,184387931,184388587,184388893,184389367 184380466,184380795,184381364,184381624,184381815,184382020,184382530,184382774,184382938,184383163,184383418,184383642,184384693,184385238,184386159,184386938,184387107,184387477,184388033,184388741,184388995,184389831 Gene ID= ENSG00000090539.15 TPM= 2.11 Transcript Type= NA chr3 184380302 184389831 184380302 184389831 + transcript4775.chr3.nic@CHRD transcript4775.chr3.nic protein_coding 184380302,184380692,184381235,184381496,184381716,184381933,184382634,184382856,184383016,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387051,184387374,184387931,184388587,184388893,184389367 184380466,184380795,184381364,184381624,184381815,184382530,184382774,184382938,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184386938,184387107,184387477,184388033,184388741,184388995,184389831 Gene ID= ENSG00000090539.15 TPM= 6.64 Transcript Type= NA chr3 184380328 184389831 184380328 184389831 + transcript4777.chr3.nic@CHRD transcript4777.chr3.nic protein_coding 184380328,184380692,184381235,184381496,184381716,184381933,184382389,184382634,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387051,184387374,184387931,184388587,184388893,184389367 184380466,184380795,184381364,184381624,184381815,184382020,184382530,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184386938,184387107,184387477,184388033,184388741,184388995,184389831 Gene ID= ENSG00000090539.15 TPM= 4.83 Transcript Type= NA chr3 184380303 184389831 184380303 184389831 + transcript4783.chr3.nic@CHRD transcript4783.chr3.nic protein_coding 184380303,184380692,184381235,184381496,184381716,184381933,184382634,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387051,184387374,184387931,184388587,184388893,184389367 184380466,184380795,184381364,184381624,184381815,184382530,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184386938,184387107,184387477,184388033,184388741,184388995,184389831 Gene ID= ENSG00000090539.15 TPM= 3.92 Transcript Type= NA chr3 184380348 184389831 184380348 184389831 + transcript4787.chr3.nic@CHRD transcript4787.chr3.nic protein_coding 184380348,184380692,184381235,184381496,184381716,184381933,184383016,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387374,184387931,184388587,184388893,184389367 184380466,184380795,184381364,184381624,184381815,184382938,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184387107,184387477,184388033,184388741,184388995,184389831 Gene ID= ENSG00000090539.15 TPM= 3.02 Transcript Type= NA chr3 184380315 184389831 184380315 184389831 + transcript4788.chr3.nic@CHRD transcript4788.chr3.nic protein_coding 184380315,184380692,184381496,184381716,184381933,184382634,184383312,184383523,184384537,184385018,184386046,184386492,184386845,184387051,184387374,184387931,184388587,184388893,184389367 184380466,184381364,184381624,184381815,184382530,184383163,184383418,184383642,184384693,184385238,184386159,184386755,184386938,184387107,184387477,184388033,184388741,184388995,184389831 Gene ID= ENSG00000090539.15 TPM= 4.83 Transcript Type= NA chr3 184561784 184582409 184561784 184582409 + ENST00000330394.2@EPHB3 ENST00000330394.2 protein_coding 184561784,184571318,184572504,184575830,184576842,184577343,184577658,184577898,184578414,184579477,184579687,184580402,184580729,184580972,184581253,184581514 184562353,184571382,184573176,184575985,184577183,184577467,184577817,184578006,184578466,184579599,184579934,184580617,184580878,184581165,184581408,184582409 Gene ID= ENSG00000182580.2 TPM= 2.72 Transcript Type= protein_coding chr3 184582791 184616152 184582791 184616152 . transcript4799.chr3.nnic@NA transcript4799.chr3.nnic NA 184582791,184587654,184615807 184582923,184587848,184616152 Gene ID= novel_gene_chr3_4800 TPM= 1.81 Transcript Type= NA chr3 184812171 185052612 184812171 185052612 + ENST00000436792.6@VPS8 ENST00000436792.6 protein_coding 184812171,184824545,184826163,184832689,184834649,184838714,184839698,184849071,184849936,184852500,184853857,184854114,184855711,184859985,184862897,184866876,184868024,184868946,184869482,184870716,184886110,184894703,184898565,184900921,184913519,184914981,184915355,184920127,184924862,184926594,184928451,184929580,184930470,184936246,184940197,184957374,184964468,184966671,184971649,184982566,184983012,184993983,184996332,184999696,185024336,185048479,185051876 184812225,184824785,184826231,184832819,184834742,184838746,184839752,184849195,184850022,184852567,184854010,184854173,184855818,184860065,184863067,184866950,184868059,184869036,184869528,184870805,184886156,184894925,184898654,184900972,184913561,184915053,184915474,184920198,184924981,184926650,184928533,184929664,184930568,184936335,184940243,184957521,184964557,184966713,184971752,184982647,184983094,184994063,184996501,184999861,185024389,185048559,185052612 Gene ID= ENSG00000156931.15 TPM= 25.36 Transcript Type= protein_coding chr3 185190624 185254098 185190624 185254098 - ENST00000231887.7@EHHADH ENST00000231887.7 protein_coding 185253949,185248414,185235290,185229432,185218136,185204416,185190624 185254098,185248517,185235462,185229543,185218240,185204757,185193487 Gene ID= ENSG00000113790.10 TPM= 2.72 Transcript Type= protein_coding chr3 185282941 185293079 185282941 185293079 + ENST00000448876.5@MAP3K13 ENST00000448876.5 protein_coding 185282941,185285517,185291613 185283027,185285643,185293079 Gene ID= ENSG00000073803.13 TPM= 33.51 Transcript Type= protein_coding chr3 185489601 185499057 185489601 185499057 - ENST00000421852.5@TMEM41A ENST00000421852.5 protein_coding 185498843,185496828,185495154,185494623,185489601 185499057,185496981,185495315,185494761,185491757 Gene ID= ENSG00000163900.10 TPM= 37.13 Transcript Type= protein_coding chr3 185586217 185631103 185586217 185631103 + transcript4813.chr3.nnic@SENP2 transcript4813.chr3.nnic protein_coding 185586217,185586396,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782 185586319,185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631103 Gene ID= ENSG00000163904.12 TPM= 3.24 Transcript Type= NA chr3 185586228 185631103 185586228 185631103 + transcript4815.chr3.nnic@SENP2 transcript4815.chr3.nnic protein_coding 185586228,185586393,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782 185586334,185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631103 Gene ID= ENSG00000163904.12 TPM= 5.05 Transcript Type= NA chr3 185586174 185633551 185586174 185633551 + ENST00000296257.9@SENP2 ENST00000296257.9 protein_coding 185586174,185590114,185598412,185598958,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782 185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185633551 Gene ID= ENSG00000163904.12 TPM= 27.39 Transcript Type= protein_coding chr3 185586210 185631103 185586210 185631103 + transcript4819.chr3.nic@SENP2 transcript4819.chr3.nic protein_coding 185586210,185590114,185598412,185598992,185600765,185606330,185609247,185611651,185612607,185613345,185614564,185617480,185619299,185621826,185623998,185626298,185629782 185586514,185590169,185598545,185599024,185600855,185606498,185609350,185611745,185612658,185613408,185614740,185617611,185619502,185621905,185624082,185626393,185631103 Gene ID= ENSG00000163904.12 TPM= 3.24 Transcript Type= NA chr3 185643739 185825056 185643739 185825056 - ENST00000382199.6@IGF2BP2 ENST00000382199.6 protein_coding 185824783,185823153,185698299,185696612,185692699,185689355,185687057,185675791,185675296,185672541,185658341,185657286,185652094,185649403,185647025,185643739 185825056,185823213,185698347,185696663,185692762,185689627,185687191,185675913,185675431,185672669,185658409,185657402,185652168,185649534,185647138,185645623 Gene ID= ENSG00000073792.15 TPM= 7.24 Transcript Type= protein_coding chr3 185915906 185938136 185915906 185938136 - ENST00000453386.6@TRA2B ENST00000453386.6 protein_coding 185937825,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185915906 185938136,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725 Gene ID= ENSG00000136527.17 TPM= 50.26 Transcript Type= protein_coding chr3 185917330 185938029 185917330 185938029 - ENST00000456380.5@TRA2B ENST00000456380.5 protein_coding 185937825,185931577,185926601,185925464,185923796,185922011,185921104,185919437,185918365,185917330 185938029,185931852,185926734,185925626,185923984,185922126,185921187,185919496,185918438,185917725 Gene ID= ENSG00000136527.17 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr3 186046308 186109112 186046308 186109112 - ENST00000306376.9@ETV5 ENST00000306376.9 protein_coding 186108940,186105824,186105625,186105449,186105305,186081046,186079817,186065813,186064417,186057423,186057075,186052030,186046308 186109112,186105942,186105712,186105496,186105355,186081175,186080104,186066072,186064476,186057491,186057244,186052131,186048860 Gene ID= ENSG00000244405.7 TPM= 70.63 Transcript Type= protein_coding chr3 186147192 186242637 186147192 186242637 - transcript4843.chr3.nnic@DGKG transcript4843.chr3.nnic protein_coding 186242504,186211795,186164898,186161603,186147192 186242637,186211885,186165018,186161663,186150188 Gene ID= ENSG00000058866.14 TPM= 1.81 Transcript Type= NA chr3 186147201 186362237 186147201 186362237 - ENST00000265022.7@DGKG ENST00000265022.7 protein_coding 186361946,186320393,186306901,186298064,186297421,186288710,186284660,186280670,186279851,186275547,186272255,186268801,186267685,186265247,186261699,186260439,186257854,186253093,186251759,186242504,186211795,186188202,186164898,186161603,186147201 186362237,186320707,186306977,186298229,186297483,186288880,186284709,186280744,186279973,186275664,186272343,186268917,186267777,186265306,186261778,186260513,186257939,186253182,186251919,186242568,186211885,186188379,186165018,186161663,186150188 Gene ID= ENSG00000058866.14 TPM= 3.62 Transcript Type= protein_coding chr3 186546339 186567352 186546339 186567352 - ENST00000338733.9@TBCCD1 ENST00000338733.9 protein_coding 186567267,186563994,186558417,186556409,186554898,186554254,186551129,186546339 186567352,186564372,186558572,186556775,186555084,186554751,186551279,186546955 Gene ID= ENSG00000113838.12 TPM= 12.68 Transcript Type= protein_coding chr3 186567403 186585800 186567403 186585800 + ENST00000439351.5@DNAJB11 ENST00000439351.5 protein_coding 186567403,186570163,186572095,186575840,186577668,186581371,186581995,186582716,186583865,186584430,186585344 186567596,186570965,186572251,186575937,186577800,186581513,186582077,186582773,186583976,186584589,186585800 Gene ID= ENSG00000090520.11 TPM= 51.62 Transcript Type= protein_coding chr3 186783547 186789900 186783547 186789900 + ENST00000323963.9@EIF4A2 ENST00000323963.9 protein_coding 186783547,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186789125 186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186789900 Gene ID= ENSG00000156976.16 TPM= 330.76 Transcript Type= protein_coding chr3 186783575 186789899 186783575 186789899 + transcript4874.chr3.nic@EIF4A2 transcript4874.chr3.nic protein_coding 186783575,186784432,186784564,186785883,186786164,186786502,186787127,186787495,186787803 186783639,186784477,186784696,186786051,186786273,186786645,186787264,186787584,186789899 Gene ID= ENSG00000156976.16 TPM= 11.77 Transcript Type= NA chr3 186783577 186789897 186783577 186789897 + ENST00000440191.6@EIF4A2 ENST00000440191.6 protein_coding 186783577,186784429,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186789125 186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186789897 Gene ID= ENSG00000156976.16 TPM= 108.6 Transcript Type= protein_coding chr3 186783577 186789881 186783577 186789881 + ENST00000425053.5@EIF4A2 ENST00000425053.5 protein_coding 186783577,186784432,186784564,186784962,186785883,186786164,186786502,186787127,186787495,186787803,186788310,186789125 186783639,186784477,186784696,186785101,186786051,186786273,186786645,186787264,186787584,186787882,186788416,186789881 Gene ID= ENSG00000156976.16 TPM= 20.61 Transcript Type= nonsense_mediated_decay chr3 186789895 186806695 186789895 186806695 - ENST00000392481.6@RFC4 ENST00000392481.6 protein_coding 186806425,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790326,186790142,186789895 186806695,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790255,186790064 Gene ID= ENSG00000163918.10 TPM= 2.26 Transcript Type= protein_coding chr3 186789900 186806501 186789900 186806501 - ENST00000296273.6@RFC4 ENST00000296273.6 protein_coding 186806290,186804583,186801117,186797535,186794658,186792804,186792490,186791725,186790326,186790142,186789900 186806501,186804724,186801195,186797614,186794777,186792947,186792610,186791850,186790406,186790255,186790064 Gene ID= ENSG00000163918.10 TPM= 7.7 Transcript Type= protein_coding chr3 186842690 186858463 186842690 186858463 + ENST00000320741.6@ADIPOQ ENST00000320741.6 protein_coding 186842690,186853051,186854184 186842749,186853272,186858463 Gene ID= ENSG00000181092.9 TPM= 3.62 Transcript Type= protein_coding chr3 186930485 187078553 186930485 187078553 + ENST00000169298.7@ST6GAL1 ENST00000169298.7 protein_coding 186930485,186963785,187038742,187042654,187051249,187072849,187074159,187075562 186930834,186963926,187038873,187043310,187051346,187072947,187074333,187078553 Gene ID= ENSG00000073849.14 TPM= 31.69 Transcript Type= protein_coding chr3 187120948 187139523 187120948 187139523 - ENST00000296277.8@RPL39L ENST00000296277.8 protein_coding 187139213,187127999,187120948 187139523,187128062,187121328 Gene ID= ENSG00000163923.9 TPM= 1.81 Transcript Type= protein_coding chr3 187721377 187745727 187721377 187745727 - ENST00000406870.6@BCL6 ENST00000406870.6 protein_coding 187745410,187734869,187733533,187731709,187729050,187728360,187726731,187725499,187724941,187721377 187745727,187734907,187733703,187731930,187730021,187728544,187726898,187725629,187725078,187722601 Gene ID= ENSG00000113916.17 TPM= 14.04 Transcript Type= protein_coding chr3 187721382 187737997 187721382 187737997 - transcript4894.chr3.nnic@BCL6 transcript4894.chr3.nnic protein_coding 187736090,187734869,187733533,187731709,187729050,187728360,187726731,187725499,187724941,187721382 187737997,187734907,187733703,187731932,187730023,187728544,187726898,187725629,187725078,187722601 Gene ID= ENSG00000113916.17 TPM= 15.85 Transcript Type= NA chr3 189956728 190120929 189956728 190120929 - ENST00000319332.9@P3H2 ENST00000319332.9 protein_coding 190120252,189995290,189994094,189988907,189987527,189986788,189984550,189983046,189974558,189973909,189972874,189971890,189970816,189963958,189956728 190120929,189995442,189994283,189989038,189987669,189986877,189984590,189983140,189974685,189974004,189973024,189972007,189970891,189964098,189958004 Gene ID= ENSG00000090530.9 TPM= 522.05 Transcript Type= protein_coding chr3 190305701 190322475 190305701 190322475 - ENST00000295522.3@CLDN1 ENST00000295522.3 protein_coding 190321984,190312872,190310169,190305701 190322475,190313036,190310253,190308439 Gene ID= ENSG00000163347.5 TPM= 25.36 Transcript Type= protein_coding chr3 190322535 190412240 190322535 190412240 + transcript4925.chr3.nnic@CLDN16 transcript4925.chr3.nnic protein_coding 190322535,190370893,190374528,190388237,190402337,190404762,190408314,190409903 190322661,190371001,190374603,190388443,190402439,190404926,190408505,190412240 Gene ID= ENSG00000113946.3 TPM= 2.72 Transcript Type= NA chr3 190514102 190630285 190514102 190630285 + ENST00000422940.5@IL1RAP ENST00000422940.5 protein_coding 190514102,190564289,190604128,190608995,190620275,190623344,190627323,190629350 190514219,190564353,190604413,190609181,190620440,190623415,190627449,190630285 Gene ID= ENSG00000196083.9 TPM= 1.81 Transcript Type= protein_coding chr3 191329077 191398670 191329077 191398670 + ENST00000392455.7@CCDC50 ENST00000392455.7 protein_coding 191329077,191357088,191357998,191361069,191369919,191380159,191380687,191380828,191382746,191389496,191391741 191329723,191357150,191358124,191361159,191370036,191380274,191380731,191380932,191382825,191389602,191398670 Gene ID= ENSG00000152492.13 TPM= 51.62 Transcript Type= protein_coding chr3 193241125 193270855 193241125 193270855 + ENST00000264735.2@HRASLS ENST00000264735.2 protein_coding 193241125,193255651,193262970,193270604 193241533,193255789,193263235,193270855 Gene ID= ENSG00000127252.5 TPM= 3.62 Transcript Type= protein_coding chr3 193593144 193697811 193593144 193697811 + ENST00000361908.7@OPA1 ENST00000361908.7 protein_coding 193593144,193614723,193615674,193617178,193618869,193626092,193631612,193635418,193637195,193637952,193642765,193642975,193643373,193643528,193643975,193645553,193645728,193647065,193648070,193648795,193654862,193657080,193658887,193659482,193662822,193664880,193666296,193667170,193692063,193694606 193593409,193615041,193615770,193617285,193618936,193626202,193631665,193635522,193637281,193638065,193642845,193643049,193643444,193643627,193644105,193645625,193645800,193647180,193648134,193648871,193655027,193657232,193658995,193659561,193662962,193664996,193666389,193667280,193692132,193697811 Gene ID= ENSG00000198836.8 TPM= 65.65 Transcript Type= protein_coding chr3 194136116 194138578 194136116 194138578 + transcript4961.chr3.nic@HES1 transcript4961.chr3.nic protein_coding 194136116,194136617,194136961 194136488,194136712,194138578 Gene ID= ENSG00000114315.3 TPM= 14.49 Transcript Type= NA chr3 194296462 194312853 194296462 194312853 - transcript4966.chr3.nic@LINC00887 transcript4966.chr3.nic lincRNA 194312601,194305757,194301554,194296462 194312853,194306027,194301586,194296847 Gene ID= ENSG00000214145.6 TPM= 6.34 Transcript Type= NA chr3 194296465 194312704 194296465 194312704 - ENST00000456816.5@LINC00887 ENST00000456816.5 lincRNA 194312601,194305757,194301554,194296465 194312704,194306027,194301591,194296847 Gene ID= ENSG00000214145.6 TPM= 8.15 Transcript Type= lincRNA chr3 194339765 194351328 194339765 194351328 - ENST00000323830.3@CPN2 ENST00000323830.3 protein_coding 194351242,194339765 194351328,194342705 Gene ID= ENSG00000178772.6 TPM= 7.24 Transcript Type= protein_coding chr3 194402673 194487033 194402673 194487033 - transcript4980.chr3.nic@ATP13A3 transcript4980.chr3.nic protein_coding 194486566,194485794,194462140,194460658,194459789,194459471,194457094,194455893,194454258,194453706,194450145,194448457,194447852,194446927,194444725,194441311,194438856,194437556,194437311,194437095,194433772,194431717,194431104,194430943,194430273,194430072,194429678,194428845,194427075,194425342,194419879,194413759,194412199,194402673 194487033,194485835,194462236,194460831,194459971,194459541,194457174,194455962,194454392,194453778,194450276,194448636,194448009,194447115,194444786,194441461,194438972,194437573,194437464,194437215,194433896,194431892,194431226,194431022,194430315,194430181,194429774,194428917,194427252,194425529,194419967,194413839,194412288,194406116 Gene ID= ENSG00000133657.14 TPM= 9.96 Transcript Type= NA chr3 194587683 194633374 194587683 194633374 - transcript4987.chr3.nic@TMEM44 transcript4987.chr3.nic protein_coding 194633079,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604287,194593041,194587683 194633374,194628509,194625990,194623695,194623310,194617269,194615697,194611020,194604445,194593073,194588639 Gene ID= ENSG00000145014.17 TPM= 1.81 Transcript Type= NA chr3 194587681 194633325 194587681 194633325 - ENST00000347147.8@TMEM44 ENST00000347147.8 protein_coding 194633079,194628383,194625897,194623529,194623224,194617099,194615569,194610916,194604287,194587681 194633325,194628509,194625990,194623695,194623310,194617269,194615697,194611020,194604445,194588639 Gene ID= ENSG00000145014.17 TPM= 2.72 Transcript Type= protein_coding chr3 194640787 194672183 194640787 194672183 - transcript4995.chr3.nic@LSG1 transcript4995.chr3.nic protein_coding 194672064,194670009,194666452,194666203,194665557,194660073,194658957,194652729,194651115,194650881,194648681,194646164,194644573,194640787 194672183,194670135,194666572,194666289,194665643,194660133,194659133,194653142,194651216,194651024,194648753,194646243,194644746,194642247 Gene ID= ENSG00000041802.10 TPM= 1.81 Transcript Type= NA chr3 194640788 194672477 194640788 194672477 - ENST00000265245.9@LSG1 ENST00000265245.9 protein_coding 194672064,194670009,194666452,194666203,194665557,194660073,194658957,194652729,194651115,194650881,194648681,194646164,194644573,194640788 194672477,194670135,194666572,194666289,194665643,194660133,194659133,194653142,194651216,194651024,194648804,194646243,194644746,194642247 Gene ID= ENSG00000041802.10 TPM= 65.2 Transcript Type= protein_coding chr3 195068279 195271167 195068279 195271167 - ENST00000310380.10@XXYLT1 ENST00000310380.10 protein_coding 195270555,195226709,195156449,195068279 195271167,195226856,195156581,195070111 Gene ID= ENSG00000173950.15 TPM= 9.06 Transcript Type= protein_coding chr3 195274736 195443078 195274736 195443078 - ENST00000326793.10@ACAP2 ENST00000326793.10 protein_coding 195442795,195392090,195381903,195381009,195345259,195342471,195336932,195333028,195326885,195320701,195308786,195307223,195306511,195301966,195301575,195297190,195295708,195294719,195292265,195291706,195289121,195285796,195274736 195443078,195392147,195382022,195381062,195345317,195342654,195336976,195333123,195326959,195320813,195308837,195307323,195306616,195302174,195301644,195297281,195295892,195294811,195292452,195291815,195289231,195285857,195279428 Gene ID= ENSG00000114331.13 TPM= 3.62 Transcript Type= protein_coding chr3 195514425 195543386 195514425 195543386 - ENST00000618156.4@PPP1R2 ENST00000618156.4 protein_coding 195542904,195529794,195524819,195523692,195519018,195514425 195543386,195529901,195524896,195523786,195519185,195516942 Gene ID= ENSG00000184203.7 TPM= 103.23 Transcript Type= protein_coding chr3 195514424 195543353 195514424 195543353 - transcript5014.chr3.nic@PPP1R2 transcript5014.chr3.nic protein_coding 195542904,195529794,195524819,195519018,195514424 195543353,195529901,195524896,195519185,195516942 Gene ID= ENSG00000184203.7 TPM= 4.53 Transcript Type= NA chr3 195568702 195584205 195568702 195584205 - ENST00000343267.7@APOD ENST00000343267.7 protein_coding 195583878,195579339,195573850,195571277,195568702 195584205,195579495,195573971,195571365,195569135 Gene ID= ENSG00000189058.8 TPM= 42.56 Transcript Type= protein_coding chr3 195658065 195688862 195658065 195688862 + ENST00000429897.5@LINC00969 ENST00000429897.5 lincRNA 195658065,195661756,195662571,195664086,195666066,195668519,195671132,195672484,195673818,195677727,195681190,195681536,195683752,195688533 195658165,195661841,195662733,195664250,195666214,195668641,195671300,195672679,195673987,195677848,195681301,195681666,195683865,195688862 Gene ID= ENSG00000242086.8 TPM= 2.72 Transcript Type= lincRNA chr3 195959757 195990316 195959757 195990316 - transcript5038.chr3.nic@SDHAP1 transcript5038.chr3.nic transcribed_unprocessed_pseudogene 195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195968219,195967879,195967514,195965429,195963300,195959757 195990316,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195968385,195967990,195967644,195965542,195963421,195960086 Gene ID= ENSG00000185485.14 TPM= 1.99 Transcript Type= NA chr3 195958142 195990316 195958142 195990316 - transcript5043.chr3.nic@SDHAP1 transcript5043.chr3.nic transcribed_unprocessed_pseudogene 195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195958142 195990316,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195960086 Gene ID= ENSG00000185485.14 TPM= 7.43 Transcript Type= NA chr3 195963109 195990316 195963109 195990316 - transcript5045.chr3.nic@SDHAP1 transcript5045.chr3.nic transcribed_unprocessed_pseudogene 195990190,195986519,195985627,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963109 195990316,195986604,195985789,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421 Gene ID= ENSG00000185485.14 TPM= 2.44 Transcript Type= NA chr3 195959737 195990301 195959737 195990301 - transcript5046.chr3.nnic@SDHAP1 transcript5046.chr3.nnic transcribed_unprocessed_pseudogene 195990190,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963300,195959737 195990301,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421,195960086 Gene ID= ENSG00000185485.14 TPM= 1.99 Transcript Type= NA chr3 195963109 195990301 195963109 195990301 - transcript5047.chr3.nnic@SDHAP1 transcript5047.chr3.nnic transcribed_unprocessed_pseudogene 195990190,195984112,195982162,195979744,195977083,195975705,195974397,195971323,195967879,195967514,195965429,195963109 195990301,195984276,195982310,195979866,195977251,195975900,195974566,195971444,195967990,195967644,195965542,195963421 Gene ID= ENSG00000185485.14 TPM= 2.44 Transcript Type= NA chr3 196049284 196082189 196049284 196082189 - ENST00000360110.8@TFRC ENST00000360110.8 protein_coding 196082043,196077064,196075159,196073930,196072003,196071396,196069455,196068032,196067518,196065443,196064309,196062854,196062582,196060180,196058574,196058284,196055080,196053418,196049284 196082189,196077122,196075360,196074125,196072152,196071498,196069568,196068130,196067657,196065600,196064428,196062939,196062645,196060247,196058632,196058365,196055301,196053558,196052184 Gene ID= ENSG00000072274.12 TPM= 16.3 Transcript Type= protein_coding chr3 196197452 196211386 196197452 196211386 - ENST00000465519.5@ZDHHC19 ENST00000465519.5 protein_coding 196211170,196210616,196208774,196208388,196207398,196198789,196198276,196197452 196211386,196210659,196209515,196208560,196207503,196198869,196198451,196197725 Gene ID= ENSG00000163958.13 TPM= 4.07 Transcript Type= retained_intron chr3 196197453 196207533 196197453 196207533 - transcript5064.chr3.nnic@ZDHHC19 transcript5064.chr3.nnic protein_coding 196207398,196198276,196197453 196207533,196198451,196197725 Gene ID= ENSG00000163958.13 TPM= 9.51 Transcript Type= NA chr3 196216504 196233430 196216504 196233430 + ENST00000296327.9@SLC51A ENST00000296327.9 protein_coding 196216504,196217842,196226965,196227664,196228115,196228809,196229915,196232419,196233063 196216750,196217936,196227119,196227737,196228273,196228920,196230061,196232524,196233430 Gene ID= ENSG00000163959.9 TPM= 8.15 Transcript Type= protein_coding chr3 196234369 196287750 196234369 196287750 - transcript5068.chr3.nnic@PCYT1A transcript5068.chr3.nnic protein_coding 196287615,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196237447,196234369 196287750,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894,196234864 Gene ID= ENSG00000161217.11 TPM= 12.68 Transcript Type= NA chr3 196234369 196287750 196234369 196287750 - transcript5069.chr3.nnic@PCYT1A transcript5069.chr3.nnic protein_coding 196287615,196270415,196257788,196248207,196247367,196242562,196241948,196239547,196237792,196234369 196287750,196270541,196257887,196248323,196247518,196242640,196242090,196239735,196238894,196234864 Gene ID= ENSG00000161217.11 TPM= 4.53 Transcript Type= NA chr3 196234369 196241131 196234369 196241131 - transcript5086.chr3.nnic@PCYT1A transcript5086.chr3.nnic protein_coding 196240997,196239547,196234369 196241131,196239735,196238894 Gene ID= ENSG00000161217.11 TPM= 5.43 Transcript Type= NA chr3 196291221 196318324 196291221 196318324 - transcript5088.chr3.nnic@AC069257.3 transcript5088.chr3.nnic protein_coding 196318040,196316098,196306943,196291221 196318324,196316231,196307012,196291374 Gene ID= ENSG00000272741.1 TPM= 3.62 Transcript Type= NA chr3 196347662 196432474 196347662 196432474 - ENST00000296328.8@UBXN7 ENST00000296328.8 protein_coding 196432327,196407246,196402952,196393554,196391813,196371896,196369421,196368028,196362294,196361844,196347662 196432474,196407393,196403019,196393619,196391925,196372042,196369511,196368155,196362687,196361923,196356846 Gene ID= ENSG00000163960.11 TPM= 7.24 Transcript Type= protein_coding chr3 196706277 196712293 196706277 196712293 - ENST00000409690.3@CEP19 ENST00000409690.3 protein_coding 196711929,196708528,196706277 196712293,196708727,196707912 Gene ID= ENSG00000174007.7 TPM= 8.15 Transcript Type= protein_coding chr3 196712305 196736003 196712305 196736003 + transcript5107.chr3.nic@PIGX transcript5107.chr3.nic protein_coding 196712305,196716858,196722415,196726655,196727923,196730992,196733759 196712644,196716921,196722556,196726771,196728136,196731092,196736003 Gene ID= ENSG00000163964.14 TPM= 7.24 Transcript Type= NA chr3 196739911 196832481 196739911 196832481 + transcript5114.chr3.nnic@PAK2 transcript5114.chr3.nnic protein_coding 196739911,196765921,196782626,196801927,196803017,196805352,196806579,196807782,196810590,196812219,196812739,196814451,196818057,196820371,196827196,196828319 196740157,196766039,196782833,196802027,196803164,196805383,196806686,196807914,196810653,196812267,196812851,196814568,196818156,196820567,196827333,196832481 Gene ID= ENSG00000180370.10 TPM= 4.53 Transcript Type= NA chr3 196867856 196934714 196867856 196934714 + ENST00000323460.9@SENP5 ENST00000323460.9 protein_coding 196867856,196885151,196899666,196899924,196900365,196903533,196923414,196927796,196929633,196930813 196868073,196886694,196899771,196900062,196900412,196903610,196923551,196927879,196929683,196934714 Gene ID= ENSG00000119231.10 TPM= 2.72 Transcript Type= protein_coding chr3 196935407 196942597 196935407 196942597 - ENST00000321256.9@NCBP2 ENST00000321256.9 protein_coding 196942426,196939251,196937510,196935407 196942597,196939432,196937648,196937082 Gene ID= ENSG00000114503.10 TPM= 104.14 Transcript Type= protein_coding chr3 196935409 196942594 196935409 196942594 - ENST00000428425.1@NCBP2 ENST00000428425.1 protein_coding 196942370,196939251,196937510,196935409 196942594,196939432,196937648,196937082 Gene ID= ENSG00000114503.10 TPM= 14.49 Transcript Type= nonsense_mediated_decay chr3 196935407 196942560 196935407 196942560 - ENST00000463783.1@NCBP2 ENST00000463783.1 protein_coding 196942426,196935407 196942560,196939432 Gene ID= ENSG00000114503.10 TPM= 1.81 Transcript Type= retained_intron chr3 196935406 196942377 196935406 196942377 - ENST00000447325.5@NCBP2 ENST00000447325.5 protein_coding 196942160,196939251,196937510,196935406 196942377,196939432,196937648,196937082 Gene ID= ENSG00000114503.10 TPM= 1.81 Transcript Type= protein_coding chr3 197042927 197298634 197042927 197298634 - transcript5128.chr3.nic@DLG1 transcript5128.chr3.nic protein_coding 197298536,197297186,197296346,197282679,197194425,197161640,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042927 197298634,197297235,197296477,197282845,197194589,197161738,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729 Gene ID= ENSG00000075711.20 TPM= 1.81 Transcript Type= NA chr3 197042928 197298101 197042928 197298101 - transcript5129.chr3.nic@DLG1 transcript5129.chr3.nic protein_coding 197297544,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197075837,197069219,197066704,197065708,197065276,197059889,197051577,197042928 197298101,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197075870,197069260,197066754,197065809,197065448,197059998,197051668,197044729 Gene ID= ENSG00000075711.20 TPM= 2.72 Transcript Type= NA chr3 197042928 197298136 197042928 197298136 - transcript5130.chr3.nic@DLG1 transcript5130.chr3.nic protein_coding 197297673,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197075837,197069219,197066704,197065708,197065276,197059889,197051577,197042928 197298136,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197075870,197069260,197066754,197065809,197065448,197059998,197051668,197044729 Gene ID= ENSG00000075711.20 TPM= 2.72 Transcript Type= NA chr3 197042935 197298136 197042935 197298136 - transcript5132.chr3.nic@DLG1 transcript5132.chr3.nic protein_coding 197297673,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042935 197298136,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729 Gene ID= ENSG00000075711.20 TPM= 4.53 Transcript Type= NA chr3 197042928 197298634 197042928 197298634 - transcript5133.chr3.nic@DLG1 transcript5133.chr3.nic protein_coding 197298536,197297186,197296346,197282679,197194425,197149743,197142718,197140140,197138222,197136542,197130527,197119410,197115927,197104903,197090912,197085580,197081051,197076586,197069219,197066704,197065708,197065276,197059889,197051577,197042928 197298634,197297235,197296477,197282845,197194589,197149796,197142768,197140264,197138391,197136678,197130671,197119530,197116083,197105005,197091026,197085756,197081117,197076685,197069260,197066754,197065809,197065448,197059998,197051668,197044729 Gene ID= ENSG00000075711.20 TPM= 1.81 Transcript Type= NA chr3 197509783 197556048 197509783 197556048 - ENST00000392378.6@BDH1 ENST00000392378.6 protein_coding 197555781,197546361,197533489,197532412,197522640,197514264,197509783 197556048,197546486,197533561,197532522,197522781,197514416,197512364 Gene ID= ENSG00000161267.11 TPM= 22.64 Transcript Type= protein_coding chr3 197601758 197627902 197601758 197627902 - transcript5141.chr3.nnic@AC132008.2 transcript5141.chr3.nnic transcribed_unprocessed_pseudogene 197627780,197624112,197623220,197622187,197621704,197619740,197615564,197613225,197601758 197627902,197624197,197623382,197622330,197621868,197619888,197615685,197613318,197603717 Gene ID= ENSG00000214135.8 TPM= 1.81 Transcript Type= NA chr3 197614035 197627902 197614035 197627902 - transcript5145.chr3.nic@AC132008.2 transcript5145.chr3.nic transcribed_unprocessed_pseudogene 197627780,197624112,197621704,197619740,197614035 197627902,197624197,197623382,197619888,197615685 Gene ID= ENSG00000214135.8 TPM= 1.81 Transcript Type= NA chr3 197749933 197784296 197749933 197784296 + transcript5152.chr3.nic@FYTTD1 transcript5152.chr3.nic protein_coding 197749933,197756426,197763466,197768439,197770132,197773403,197774149,197776927,197778338,197781811 197750074,197756557,197763638,197768587,197770244,197773499,197774210,197777001,197778464,197784296 Gene ID= ENSG00000122068.12 TPM= 3.62 Transcript Type= NA chr3 197749750 197787596 197749750 197787596 + ENST00000241502.8@FYTTD1 ENST00000241502.8 protein_coding 197749750,197756426,197768439,197770132,197773403,197774149,197776927,197778338,197781811 197750074,197756557,197768587,197770244,197773499,197774210,197777001,197778464,197787596 Gene ID= ENSG00000122068.12 TPM= 80.59 Transcript Type= protein_coding chr3 197791237 197885830 197791237 197885830 + transcript5158.chr3.nnic@LRCH3 transcript5158.chr3.nnic protein_coding 197791237,197814908,197817176,197820325,197826878,197829564,197830770,197832197,197835674,197839321,197847409,197847872,197852561,197854392,197858834,197865423,197866112,197870160,197871325,197875698,197883541,197885508 197791540,197815052,197817302,197820430,197827014,197829673,197830863,197832317,197835822,197839397,197847460,197848021,197852620,197854445,197858905,197865471,197866219,197870278,197871462,197875775,197884109,197885830 Gene ID= ENSG00000186001.12 TPM= 1.81 Transcript Type= NA chr3 197889078 197913284 197889078 197913284 - ENST00000478903.5@IQCG ENST00000478903.5 protein_coding 197912675,197892628,197891446,197889078 197913284,197892759,197891547,197889714 Gene ID= ENSG00000114473.13 TPM= 8.15 Transcript Type= retained_intron chr3 197889075 197960019 197889075 197960019 - ENST00000265239.10@IQCG ENST00000265239.10 protein_coding 197959845,197959529,197945620,197943778,197938548,197932174,197926024,197913881,197912675,197892628,197891446,197889075 197960019,197959719,197945686,197944051,197938780,197932302,197926105,197914042,197912749,197892759,197891547,197889714 Gene ID= ENSG00000114473.13 TPM= 5.43 Transcript Type= protein_coding chr3 197889077 197949925 197889077 197949925 - ENST00000455191.5@IQCG ENST00000455191.5 protein_coding 197949839,197945620,197943778,197938548,197932174,197926024,197913881,197912675,197892628,197891446,197889077 197949925,197945686,197944051,197938780,197932302,197926105,197914042,197912749,197892759,197891547,197889714 Gene ID= ENSG00000114473.13 TPM= 2.72 Transcript Type= protein_coding chr3 197949987 197956610 197949987 197956610 + ENST00000464167.5@RPL35A ENST00000464167.5 protein_coding 197949987,197950936,197951159,197954003,197955750 197950221,197950978,197951311,197954147,197956610 Gene ID= ENSG00000182899.14 TPM= 517.52 Transcript Type= protein_coding chr3 197950206 197955817 197950206 197955817 + ENST00000429437.5@RPL35A ENST00000429437.5 protein_coding 197950206,197950936,197951159,197954003,197955750 197950221,197950978,197951328,197954147,197955817 Gene ID= ENSG00000182899.14 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr3 197950194 197955851 197950194 197955851 + ENST00000448864.5@RPL35A ENST00000448864.5 protein_coding 197950194,197950936,197951159,197954003,197955750 197950299,197950978,197951311,197954147,197955851 Gene ID= ENSG00000182899.14 TPM= 43.92 Transcript Type= protein_coding chr3 197960200 198043720 197960200 198043720 + ENST00000330198.8@LMLN ENST00000330198.8 protein_coding 197960200,197974377,197975042,197976029,197976598,197980326,197983943,197985796,197990559,197996175,197999266,198019253,198021446,198024658,198035833,198038567 197960440,197974474,197975072,197976111,197976715,197980504,197984048,197985890,197990676,197996282,197999342,198019385,198021605,198024788,198036043,198043720 Gene ID= ENSG00000185621.11 TPM= 1.81 Transcript Type= protein_coding chr4 53285 88211 53285 88211 + ENST00000610261.5@ZNF595 ENST00000610261.5 protein_coding 53285,59430,60058,85731 53491,59556,60153,88211 Gene ID= ENSG00000272602.5 TPM= 3.62 Transcript Type= protein_coding chr4 425431 474178 425431 474178 - transcript22.chr4.nnic@ABCA11P transcript22.chr4.nnic transcribed_processed_pseudogene 473981,472575,437446,425431 474178,472701,437511,427119 Gene ID= ENSG00000251595.7 TPM= 2.26 Transcript Type= NA chr4 456089 474178 456089 474178 - transcript28.chr4.nnic@ABCA11P transcript28.chr4.nnic transcribed_processed_pseudogene 473981,472575,456089 474178,472701,456368 Gene ID= ENSG00000251595.7 TPM= 2.26 Transcript Type= NA chr4 499202 539436 499202 539436 + transcript32.chr4.nnic@PIGG transcript32.chr4.nnic protein_coding 499202,500396,505718,507405,508829,515973,521056,521660,522008,523459,527039,530436,533818,539153 499489,500601,505927,507593,508970,516185,521227,521941,522410,523651,527230,530745,533981,539436 Gene ID= ENSG00000174227.15 TPM= 1.81 Transcript Type= NA chr4 499174 539528 499174 539528 + transcript33.chr4.nic@PIGG transcript33.chr4.nic protein_coding 499174,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153 499725,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539528 Gene ID= ENSG00000174227.15 TPM= 2.72 Transcript Type= NA chr4 499202 527540 499202 527540 + transcript41.chr4.nic@PIGG transcript41.chr4.nic protein_coding 499202,500396,505718,507405,508829,515973,521056,521660,523459,527039 499489,500601,505927,507593,508970,516185,521273,521941,523913,527540 Gene ID= ENSG00000174227.15 TPM= 5.43 Transcript Type= NA chr4 499230 539529 499230 539529 + ENST00000453061.6@PIGG ENST00000453061.6 protein_coding 499230,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153 499489,500601,505927,507593,508970,516185,521273,521941,523913,527230,530745,533981,539529 Gene ID= ENSG00000174227.15 TPM= 35.32 Transcript Type= protein_coding chr4 499221 539529 499221 539529 + ENST00000310340.9@PIGG ENST00000310340.9 protein_coding 499221,500396,505718,507405,508829,515973,521056,521660,523459,527039,530436,533818,539153 499489,500601,505927,507593,508970,516185,521249,521941,523913,527230,530745,533981,539529 Gene ID= ENSG00000174227.15 TPM= 4.53 Transcript Type= protein_coding chr4 672436 674338 672436 674338 - ENST00000304312.4@ATP5I ENST00000304312.4 protein_coding 674212,673912,673303,672436 674338,673966,673401,672519 Gene ID= ENSG00000169020.9 TPM= 280.27 Transcript Type= protein_coding chr4 672438 674330 672438 674330 - ENST00000505852.1@ATP5I ENST00000505852.1 protein_coding 674212,673303,672438 674330,673401,672519 Gene ID= ENSG00000169020.9 TPM= 7.7 Transcript Type= processed_transcript chr4 674494 682033 674494 682033 + transcript52.chr4.nnic@MYL5 transcript52.chr4.nnic protein_coding 674494,676004,677922,678658,678958,679914,680509,681092,681893 675854,676209,678029,678765,679033,680018,680587,681140,682033 Gene ID= ENSG00000215375.6 TPM= 2.04 Transcript Type= NA chr4 674499 682033 674499 682033 + transcript53.chr4.nnic@MYL5 transcript53.chr4.nnic protein_coding 674499,676073,677922,678658,678958,679914,680509,681092,681893 674683,676209,678029,678765,679033,680018,680587,681140,682033 Gene ID= ENSG00000215375.6 TPM= 2.04 Transcript Type= NA chr4 674499 682033 674499 682033 + transcript60.chr4.nic@MYL5 transcript60.chr4.nic protein_coding 674499,676073,678658,678958,679914,680509,681092,681893 674683,676209,678765,679033,680018,680587,681140,682033 Gene ID= ENSG00000215375.6 TPM= 11.09 Transcript Type= NA chr4 674499 682033 674499 682033 + transcript68.chr4.nic@MYL5 transcript68.chr4.nic protein_coding 674499,678658,678958,679914,680509,681092,681893 676209,678765,679033,680018,680587,681140,682033 Gene ID= ENSG00000215375.6 TPM= 2.04 Transcript Type= NA chr4 705757 762220 705757 762220 + transcript82.chr4.nnic@PCGF3 transcript82.chr4.nnic protein_coding 705757,730630,730970,733672,734931,737466,743474,744600,761279,761730 705970,730668,731110,733789,735027,737521,743584,744688,761416,762220 Gene ID= ENSG00000185619.18 TPM= 2.72 Transcript Type= NA chr4 705784 734479 705784 734479 + ENST00000400151.6@PCGF3 ENST00000400151.6 protein_coding 705784,730630,730970,733672 705970,730668,731110,734479 Gene ID= ENSG00000185619.18 TPM= 2.72 Transcript Type= protein_coding chr4 784957 826198 784957 826198 - ENST00000304062.10@CPLX1 ENST00000304062.10 protein_coding 826046,824492,792433,784957 826198,824601,792608,786698 Gene ID= ENSG00000168993.14 TPM= 9.96 Transcript Type= protein_coding chr4 786294 796697 786294 796697 + transcript87.chr4.nnic@NA transcript87.chr4.nnic NA 786294,795280,796221 789357,796106,796697 Gene ID= novel_gene_chr4_88 TPM= 6.34 Transcript Type= NA chr4 849275 932415 849275 932415 - transcript98.chr4.nic@GAK transcript98.chr4.nic protein_coding 932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849275 932415,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866501,865244,859722,851974,851084,850068,849774 Gene ID= ENSG00000178950.16 TPM= 28.23 Transcript Type= NA chr4 849278 932298 849278 932298 - ENST00000314167.8@GAK ENST00000314167.8 protein_coding 932043,913607,912735,911673,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278 932298,913668,912794,911787,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774 Gene ID= ENSG00000178950.16 TPM= 82.56 Transcript Type= protein_coding chr4 849278 932373 849278 932373 - ENST00000511163.5@GAK ENST00000511163.5 protein_coding 932043,904637,898033,896460,893874,893377,890532,888847,884037,883315,882697,881907,877615,877090,876530,870711,868539,866956,866364,865122,859606,851750,850936,849892,849278 932373,904779,898158,896549,894009,893489,890622,888970,884086,883463,882819,882040,877809,877207,876609,870904,868685,867432,866534,865244,859722,851974,851084,850068,849774 Gene ID= ENSG00000178950.16 TPM= 19.17 Transcript Type= protein_coding chr4 932443 958654 932443 958654 + transcript131.chr4.nic@TMEM175 transcript131.chr4.nic protein_coding 932443,947709,948116,948411,950421,951207,951682,952367,953190,955405,955755,957824 932540,947892,948154,948615,950518,951258,951717,952450,953354,955483,955890,958654 Gene ID= ENSG00000127419.16 TPM= 5.59 Transcript Type= NA chr4 932147 958654 932147 958654 + transcript139.chr4.nic@TMEM175 transcript139.chr4.nic protein_coding 932147,947709,948116,950421,951207,951646,952367,953190,955405,955755,957824 932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958654 Gene ID= ENSG00000127419.16 TPM= 9.21 Transcript Type= NA chr4 932387 958656 932387 958656 + ENST00000264771.8@TMEM175 ENST00000264771.8 protein_coding 932387,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824 932540,947892,948154,950518,951258,951717,952450,953354,955483,955890,958656 Gene ID= ENSG00000127419.16 TPM= 56.75 Transcript Type= protein_coding chr4 932472 958656 932472 958656 + ENST00000438836.6@TMEM175 ENST00000438836.6 protein_coding 932472,947709,948116,950421,951207,951682,952367,953190,955405,955755,957824 932540,947892,948615,950518,951258,951717,952450,953354,955483,955890,958656 Gene ID= ENSG00000127419.16 TPM= 25.96 Transcript Type= retained_intron chr4 958885 973542 958885 973542 - transcript123.chr4.nnic@DGKQ transcript123.chr4.nnic protein_coding 973212,970993,968811,968479,968282,967880,967728,967549,967129,966964,966748,966466,965928,965491,965176,963139,962772,962435,961982,961688,961467,961049,958885 973542,971072,969008,968564,968407,968027,967802,967649,967361,967054,966802,966527,966078,965529,965291,963290,962920,962613,962082,961834,961578,961201,960721 Gene ID= ENSG00000145214.13 TPM= 2.72 Transcript Type= NA chr4 958888 973598 958888 973598 - transcript125.chr4.nic@DGKQ transcript125.chr4.nic protein_coding 973212,970993,968811,968479,968282,967880,967728,967549,967129,966964,966748,966466,966064,965491,965176,963139,962772,962435,961982,961688,961467,961049,958888 973598,971072,968910,968564,968407,968027,967802,967649,967361,967054,966802,966527,966301,965529,965291,963290,962920,962613,962082,961834,961578,961201,960721 Gene ID= ENSG00000145214.13 TPM= 2.72 Transcript Type= NA chr4 958887 973556 958887 973556 - ENST00000273814.7@DGKQ ENST00000273814.7 protein_coding 973212,970993,968811,968479,968282,967880,967728,967549,967129,966964,966748,966466,965928,965491,965176,963139,962772,962435,961982,961688,961467,961049,958887 973556,971072,968910,968564,968407,968027,967802,967649,967361,967054,966802,966527,966078,965529,965291,963290,962920,962613,962082,961834,961578,961201,960721 Gene ID= ENSG00000145214.13 TPM= 43.47 Transcript Type= protein_coding chr4 987004 1004505 987004 1004505 + transcript165.chr4.nic@IDUA transcript165.chr4.nic protein_coding 987004,987809,1000612,1000882,1001468,1001679,1001982,1002269,1002732,1003036,1003549,1004012,1004260 987242,987949,1000697,1000989,1001563,1001881,1002161,1002485,1002944,1003470,1003625,1004112,1004505 Gene ID= ENSG00000127415.12 TPM= 2.26 Transcript Type= NA chr4 987004 1004563 987004 1004563 + transcript167.chr4.nic@IDUA transcript167.chr4.nic protein_coding 987004,987809,1000612,1000882,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260 987242,987949,1000697,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004563 Gene ID= ENSG00000127415.12 TPM= 11.93 Transcript Type= NA chr4 987004 1004563 987004 1004563 + transcript174.chr4.nic@IDUA transcript174.chr4.nic protein_coding 987004,987809,1000612,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260 987242,987949,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004563 Gene ID= ENSG00000127415.12 TPM= 6.49 Transcript Type= NA chr4 987004 1004508 987004 1004508 + transcript175.chr4.nic@IDUA transcript175.chr4.nic protein_coding 987004,987809,1000612,1001679,1001982,1002269,1002732,1003036,1003549,1004012,1004260 987242,987949,1001563,1001881,1002161,1002485,1002944,1003470,1003625,1004112,1004508 Gene ID= ENSG00000127415.12 TPM= 3.17 Transcript Type= NA chr4 986997 1004506 986997 1004506 + ENST00000247933.8@IDUA ENST00000247933.8 protein_coding 986997,987809,1000612,1000882,1001468,1001679,1001982,1002269,1002732,1003036,1003345,1003549,1004012,1004260 987242,987949,1000697,1000989,1001563,1001881,1002161,1002485,1002944,1003157,1003470,1003625,1004112,1004506 Gene ID= ENSG00000127415.12 TPM= 24.15 Transcript Type= protein_coding chr4 1011636 1026901 1011636 1026901 + transcript193.chr4.nnic@FGFRL1 transcript193.chr4.nnic protein_coding 1011636,1012470,1022203,1023641,1023817,1024311,1024905 1011987,1012564,1022475,1023721,1024101,1024664,1026901 Gene ID= ENSG00000127418.14 TPM= 14.94 Transcript Type= NA chr4 1009979 1026891 1009979 1026891 + ENST00000398484.6@FGFRL1 ENST00000398484.6 protein_coding 1009979,1010924,1012470,1022203,1023641,1023817,1024311,1024905 1010169,1011296,1012564,1022475,1023721,1024101,1024664,1026891 Gene ID= ENSG00000127418.14 TPM= 14.04 Transcript Type= protein_coding chr4 1071456 1113552 1071456 1113552 - transcript208.chr4.nnic@RNF212 transcript208.chr4.nnic protein_coding 1113356,1108343,1096765,1093043,1090782,1085896,1073599,1071456 1113552,1108404,1096839,1093067,1092995,1085954,1073662,1073140 Gene ID= ENSG00000178222.12 TPM= 1.81 Transcript Type= NA chr4 1166932 1172873 1166932 1172873 - ENST00000290902.9@SPON2 ENST00000290902.9 protein_coding 1172544,1171852,1171263,1170999,1170402,1166932 1172873,1172074,1171486,1171190,1170576,1167656 Gene ID= ENSG00000159674.11 TPM= 178.85 Transcript Type= protein_coding chr4 1211431 1248733 1211431 1248733 - transcript223.chr4.nic@CTBP1 transcript223.chr4.nic protein_coding 1248661,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211431 1248733,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423 Gene ID= ENSG00000159692.15 TPM= 34.57 Transcript Type= NA chr4 1211448 1249112 1211448 1249112 - ENST00000382952.7@CTBP1 ENST00000382952.7 protein_coding 1248916,1241325,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448 1249112,1241519,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423 Gene ID= ENSG00000159692.15 TPM= 161.43 Transcript Type= protein_coding chr4 1211448 1249137 1211448 1249137 - ENST00000290921.10@CTBP1 ENST00000290921.10 protein_coding 1248916,1238183,1228199,1225360,1215991,1214343,1213478,1212913,1211448 1249137,1238337,1228343,1225566,1216205,1214473,1213605,1213030,1212423 Gene ID= ENSG00000159692.15 TPM= 63.63 Transcript Type= protein_coding chr4 1248884 1252995 1248884 1252995 + transcript234.chr4.nnic@CTBP1-AS2 transcript234.chr4.nnic antisense_RNA 1248884,1250111,1250896 1249702,1250346,1252995 Gene ID= ENSG00000196810.4 TPM= 3.62 Transcript Type= NA chr4 1289842 1340147 1289842 1340147 + transcript249.chr4.nic@MAEA transcript249.chr4.nic protein_coding 1289842,1311979,1315397,1322381,1327627,1328634,1332757,1336861,1338422,1339074 1289982,1312161,1315600,1322503,1327703,1330003,1332865,1336994,1338617,1340147 Gene ID= ENSG00000090316.15 TPM= 47.54 Transcript Type= NA chr4 1289842 1340147 1289842 1340147 + transcript252.chr4.nic@MAEA transcript252.chr4.nic protein_coding 1289842,1311979,1315397,1322381,1327627,1332757,1336861,1338422,1339074 1289982,1312161,1315600,1322503,1330003,1332865,1336994,1338617,1340147 Gene ID= ENSG00000090316.15 TPM= 27.62 Transcript Type= NA chr4 1289851 1340137 1289851 1340137 + ENST00000303400.8@MAEA ENST00000303400.8 protein_coding 1289851,1311979,1315397,1322381,1327627,1332757,1336861,1338422,1339074 1289982,1312161,1315600,1322503,1327703,1332865,1336994,1338617,1340137 Gene ID= ENSG00000090316.15 TPM= 180.2 Transcript Type= protein_coding chr4 1692800 1712555 1692800 1712555 - ENST00000489418.5@SLBP ENST00000489418.5 protein_coding 1712130,1711874,1703596,1700011,1699564,1696202,1694774,1692800 1712555,1711990,1703700,1700070,1699701,1696351,1694840,1693713 Gene ID= ENSG00000163950.12 TPM= 26.26 Transcript Type= protein_coding chr4 1715951 1721360 1715951 1721360 - transcript280.chr4.nnic@TMEM129 transcript280.chr4.nnic protein_coding 1720977,1720230,1718152,1717516,1715951 1721360,1720934,1718626,1717675,1717428 Gene ID= ENSG00000168936.10 TPM= 7.44 Transcript Type= NA chr4 1715951 1721360 1715951 1721360 - transcript284.chr4.nnic@TMEM129 transcript284.chr4.nnic protein_coding 1720977,1720439,1718152,1717516,1715951 1721360,1720934,1718626,1717675,1717428 Gene ID= ENSG00000168936.10 TPM= 8.35 Transcript Type= NA chr4 1715951 1721360 1715951 1721360 - transcript287.chr4.nnic@TMEM129 transcript287.chr4.nnic protein_coding 1720977,1720633,1718152,1717516,1715951 1721360,1720934,1718626,1717675,1717428 Gene ID= ENSG00000168936.10 TPM= 73.68 Transcript Type= NA chr4 1715951 1721355 1715951 1721355 - transcript288.chr4.nnic@TMEM129 transcript288.chr4.nnic protein_coding 1721019,1720633,1718152,1717516,1715951 1721355,1720934,1718626,1717675,1717428 Gene ID= ENSG00000168936.10 TPM= 80.02 Transcript Type= NA chr4 1715953 1721331 1715953 1721331 - ENST00000382936.7@TMEM129 ENST00000382936.7 protein_coding 1720633,1718152,1717516,1715953 1721331,1718626,1717675,1717428 Gene ID= ENSG00000168936.10 TPM= 25.46 Transcript Type= protein_coding chr4 1715953 1721360 1715953 1721360 - transcript309.chr4.nnic@TMEM129 transcript309.chr4.nnic protein_coding 1720977,1720633,1718152,1715953 1721360,1720934,1718626,1717428 Gene ID= ENSG00000168936.10 TPM= 6.76 Transcript Type= NA chr4 1715953 1721355 1715953 1721355 - transcript310.chr4.nnic@TMEM129 transcript310.chr4.nnic protein_coding 1721019,1720633,1718152,1715953 1721355,1720934,1718626,1717428 Gene ID= ENSG00000168936.10 TPM= 13.1 Transcript Type= NA chr4 1715952 1721358 1715952 1721358 - ENST00000303277.6@TMEM129 ENST00000303277.6 protein_coding 1720633,1718152,1715952 1721358,1718626,1717428 Gene ID= ENSG00000168936.10 TPM= 3.14 Transcript Type= protein_coding chr4 1720596 1745174 1720596 1745174 + transcript274.chr4.nnic@TACC3 transcript274.chr4.nnic protein_coding 1720596,1721046,1723421,1723728,1727708,1730887,1731172,1735273,1735731,1737241,1737598,1739702,1739959,1740826,1744518,1744712,1744948 1720961,1721209,1723583,1723870,1728787,1730962,1731301,1735325,1735834,1737328,1737702,1739778,1740002,1740986,1744624,1744832,1745174 Gene ID= ENSG00000013810.18 TPM= 1.81 Transcript Type= NA chr4 1727595 1745174 1727595 1745174 + transcript277.chr4.nic@TACC3 transcript277.chr4.nic protein_coding 1727595,1730887,1731172,1735273,1735731,1737241,1737598,1739702,1739959,1740826,1744518,1744712,1744948 1728787,1730962,1731301,1735325,1735834,1737328,1737702,1739778,1740002,1740986,1744624,1744832,1745174 Gene ID= ENSG00000013810.18 TPM= 2.72 Transcript Type= NA chr4 1721539 1745171 1721539 1745171 + ENST00000313288.8@TACC3 ENST00000313288.8 protein_coding 1721539,1723421,1723728,1727708,1730887,1731172,1735273,1735731,1737241,1737598,1739702,1739959,1740826,1744518,1744712,1744948 1721643,1723583,1723870,1728787,1730962,1731301,1735325,1735834,1737328,1737702,1739778,1740002,1740986,1744624,1744832,1745171 Gene ID= ENSG00000013810.18 TPM= 14.49 Transcript Type= protein_coding chr4 1793312 1808872 1793312 1808872 + ENST00000440486.6@FGFR3 ENST00000440486.6 protein_coding 1793312,1793833,1799254,1799747,1801367,1801620,1801835,1803692,1804330,1804824,1805355,1805559,1805750,1806051,1806257,1806546,1806829,1807116 1793465,1794043,1799523,1799812,1801536,1801743,1802025,1803836,1804520,1804969,1805476,1805669,1805940,1806173,1806327,1806683,1806934,1808872 Gene ID= ENSG00000068078.17 TPM= 3.62 Transcript Type= protein_coding chr4 1871307 1943456 1871307 1943456 + transcript338.chr4.nnic@NSD2 transcript338.chr4.nnic protein_coding 1871307,1871437,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339 1871344,1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943456 Gene ID= ENSG00000109685.17 TPM= 3.62 Transcript Type= NA chr4 1870581 1943540 1870581 1943540 + transcript340.chr4.nic@NSD2 transcript340.chr4.nic protein_coding 1870581,1900626,1904216,1916871,1918141,1930626,1935144,1938451,1939654,1942339 1871542,1901251,1904378,1917037,1918623,1930770,1935262,1938532,1939778,1943540 Gene ID= ENSG00000109685.17 TPM= 10.87 Transcript Type= NA chr4 1871382 1931533 1871382 1931533 + transcript342.chr4.nic@NSD2 transcript342.chr4.nic protein_coding 1871382,1900626,1904216,1916871,1918141,1930626 1871542,1901251,1904378,1917037,1918623,1931533 Gene ID= ENSG00000109685.17 TPM= 1.81 Transcript Type= NA chr4 1982714 2010110 1982714 2010110 - ENST00000382882.7@NELFA ENST00000382882.7 protein_coding 2008750,1991544,1989708,1987918,1986272,1986114,1985776,1984808,1983848,1983596,1982714 2010110,1991715,1989869,1988007,1986402,1986183,1985864,1984919,1984113,1983695,1983503 Gene ID= ENSG00000185049.14 TPM= 59.77 Transcript Type= protein_coding chr4 2041993 2043970 2041993 2043970 + ENST00000409248.8@C4orf48 ENST00000409248.8 protein_coding 2041993,2042327,2042736,2043861 2042068,2042484,2042824,2043970 Gene ID= ENSG00000243449.6 TPM= 74.25 Transcript Type= protein_coding chr4 2042050 2043964 2042050 2043964 + ENST00000409860.1@C4orf48 ENST00000409860.1 protein_coding 2042050,2042327,2042736,2043861 2042175,2042484,2042824,2043964 Gene ID= ENSG00000243449.6 TPM= 4.53 Transcript Type= protein_coding chr4 2227473 2242125 2227473 2242125 - transcript359.chr4.nic@HAUS3 transcript359.chr4.nic protein_coding 2241520,2240038,2238604,2236228,2227473 2242125,2241093,2239043,2236456,2232160 Gene ID= ENSG00000214367.7 TPM= 13.58 Transcript Type= NA chr4 2228369 2242134 2228369 2242134 - transcript361.chr4.nic@HAUS3 transcript361.chr4.nic protein_coding 2240038,2238604,2236228,2228369 2242134,2239043,2236456,2232160 Gene ID= ENSG00000214367.7 TPM= 9.06 Transcript Type= NA chr4 2231841 2242164 2231841 2242164 - ENST00000443786.2@HAUS3 ENST00000443786.2 protein_coding 2242051,2241520,2240038,2238604,2236228,2231841 2242164,2241790,2241093,2239043,2236456,2232160 Gene ID= ENSG00000214367.7 TPM= 6.34 Transcript Type= protein_coding chr4 2247431 2262141 2247431 2262141 - transcript368.chr4.nic@MXD4 transcript368.chr4.nic protein_coding 2261917,2261725,2257982,2255155,2252408,2251084,2247431 2262141,2261824,2258011,2255294,2252522,2251246,2250701 Gene ID= ENSG00000123933.16 TPM= 11.93 Transcript Type= NA chr4 2247432 2262144 2247432 2262144 - transcript371.chr4.nnic@MXD4 transcript371.chr4.nnic protein_coding 2261917,2261725,2257982,2252408,2251084,2248197,2247432 2262144,2261824,2258011,2252522,2251246,2250701,2248116 Gene ID= ENSG00000123933.16 TPM= 13.74 Transcript Type= NA chr4 2247432 2262294 2247432 2262294 - ENST00000337190.6@MXD4 ENST00000337190.6 protein_coding 2261917,2261725,2257982,2252408,2251084,2247432 2262294,2261824,2258011,2252522,2251246,2250701 Gene ID= ENSG00000123933.16 TPM= 415.8 Transcript Type= protein_coding chr4 2269598 2418664 2269598 2418664 - transcript388.chr4.nnic@ZFYVE28 transcript388.chr4.nnic protein_coding 2418285,2353933,2341478,2339453,2337407,2335705,2320170,2304289,2274062,2273173,2271675,2271311,2269598 2418664,2354073,2341615,2339655,2337496,2335794,2320271,2305536,2274216,2273289,2271779,2271414,2270743 Gene ID= ENSG00000159733.13 TPM= 3.32 Transcript Type= NA chr4 2269598 2418654 2269598 2418654 - transcript392.chr4.nic@ZFYVE28 transcript392.chr4.nic protein_coding 2418285,2353933,2341478,2339453,2337407,2335705,2320170,2304289,2274062,2273173,2271675,2269598 2418654,2354073,2341615,2339655,2337496,2335794,2320271,2305536,2274216,2273289,2271779,2271414 Gene ID= ENSG00000159733.13 TPM= 3.32 Transcript Type= NA chr4 2269598 2418663 2269598 2418663 - ENST00000290974.6@ZFYVE28 ENST00000290974.6 protein_coding 2418285,2353933,2341478,2339453,2337407,2335705,2320170,2304289,2274062,2273173,2271675,2271311,2269598 2418663,2354073,2341615,2339655,2337496,2335794,2320271,2305536,2274216,2273289,2271779,2271414,2270856 Gene ID= ENSG00000159733.13 TPM= 31.4 Transcript Type= protein_coding chr4 2418997 2450358 2418997 2450358 + transcript397.chr4.nic@CFAP99 transcript397.chr4.nic protein_coding 2418997,2426459,2436874,2438070,2443130,2445131,2449670,2449934 2419093,2426586,2437018,2438164,2443242,2445308,2449750,2450358 Gene ID= ENSG00000206113.10 TPM= 2.72 Transcript Type= NA chr4 2469107 2515871 2469107 2515871 + transcript399.chr4.nic@RNF4 transcript399.chr4.nic protein_coding 2469107,2470987,2490337,2497007,2500659,2511956,2512438,2513083,2513670 2469258,2471109,2490502,2497121,2500738,2511965,2512597,2513131,2515871 Gene ID= ENSG00000063978.15 TPM= 18.11 Transcript Type= NA chr4 2741648 2756331 2741648 2756331 - ENST00000510267.5@TNIP2 ENST00000510267.5 protein_coding 2755949,2747655,2745446,2744697,2744387,2741648 2756331,2747945,2745535,2744945,2744506,2742520 Gene ID= ENSG00000168884.14 TPM= 1.2 Transcript Type= protein_coding chr4 2741656 2756368 2741656 2756368 - transcript411.chr4.nic@TNIP2 transcript411.chr4.nic protein_coding 2756014,2745446,2744697,2744387,2741656 2756368,2747945,2744945,2744506,2742520 Gene ID= ENSG00000168884.14 TPM= 3.62 Transcript Type= NA chr4 2741656 2756428 2741656 2756428 - transcript414.chr4.nic@TNIP2 transcript414.chr4.nic protein_coding 2756014,2747655,2745446,2744387,2741656 2756428,2747945,2745535,2744945,2742520 Gene ID= ENSG00000168884.14 TPM= 5.73 Transcript Type= NA chr4 2741660 2756376 2741660 2756376 - ENST00000315423.11@TNIP2 ENST00000315423.11 protein_coding 2756014,2747655,2745446,2744697,2744387,2741660 2756376,2747945,2745535,2744945,2744506,2742520 Gene ID= ENSG00000168884.14 TPM= 93.57 Transcript Type= protein_coding chr4 2812219 2841096 2812219 2841096 + ENST00000442312.6@SH3BP2 ENST00000442312.6 protein_coding 2812219,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697 2812477,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2841096 Gene ID= ENSG00000087266.15 TPM= 4.07 Transcript Type= protein_coding chr4 2793029 2837040 2793029 2837040 + transcript424.chr4.nic@SH3BP2 transcript424.chr4.nic protein_coding 2793029,2820614,2822935,2824613,2825126,2827230,2827606,2831571,2831923,2832331,2832990,2833697 2793138,2820753,2823037,2824730,2825196,2827318,2827674,2831679,2831978,2832412,2833049,2837040 Gene ID= ENSG00000087266.15 TPM= 7.7 Transcript Type= NA chr4 2793023 2834293 2793023 2834293 + ENST00000452765.6@SH3BP2 ENST00000452765.6 protein_coding 2793023,2820614,2822935,2824613,2825126,2827230,2827606,2829493,2831571,2831923,2832331,2832990,2833697 2793138,2820753,2823037,2824730,2825196,2827318,2827674,2830147,2831679,2831978,2832412,2833049,2834293 Gene ID= ENSG00000087266.15 TPM= 6.34 Transcript Type= protein_coding chr4 2843827 2930099 2843827 2930099 + transcript444.chr4.nic@ADD1 transcript444.chr4.nic protein_coding 2843827,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171 2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2930099 Gene ID= ENSG00000087274.16 TPM= 301.39 Transcript Type= NA chr4 2843857 2930073 2843857 2930073 + ENST00000264758.11@ADD1 ENST00000264758.11 protein_coding 2843857,2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171 2844024,2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905108,2907844,2908604,2915040,2926112,2930073 Gene ID= ENSG00000087274.16 TPM= 43.61 Transcript Type= protein_coding chr4 2875896 2930076 2875896 2930076 + ENST00000398129.5@ADD1 ENST00000398129.5 protein_coding 2875896,2881898,2884515,2894013,2894582,2898184,2898433,2899259,2904764,2907743,2908515,2914884,2926014,2928171 2876110,2882060,2884666,2894093,2894731,2898327,2898531,2899435,2905015,2907844,2908604,2915040,2926112,2930076 Gene ID= ENSG00000087274.16 TPM= 15.92 Transcript Type= protein_coding chr4 2929934 2934881 2929934 2934881 - transcript472.chr4.nic@MFSD10 transcript472.chr4.nic protein_coding 2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2929934 2934881,2933944,2933663,2933177,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953 Gene ID= ENSG00000109736.14 TPM= 6.34 Transcript Type= NA chr4 2930559 2934825 2930559 2934825 - transcript475.chr4.nnic@MFSD10 transcript475.chr4.nnic protein_coding 2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930559 2934825,2933944,2933663,2933209,2932902,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953 Gene ID= ENSG00000109736.14 TPM= 3.62 Transcript Type= NA chr4 2930566 2934881 2930566 2934881 - transcript480.chr4.nic@MFSD10 transcript480.chr4.nic protein_coding 2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2930566 2934881,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150 Gene ID= ENSG00000109736.14 TPM= 5.43 Transcript Type= NA chr4 2930565 2934859 2930565 2934859 - ENST00000355443.8@MFSD10 ENST00000355443.8 protein_coding 2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931555,2931375,2931227,2931061,2930565 2934859,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931663,2931465,2931274,2931150,2930953 Gene ID= ENSG00000109736.14 TPM= 97.8 Transcript Type= protein_coding chr4 2930565 2931886 2930565 2931886 - ENST00000514031.5@MFSD10 ENST00000514031.5 protein_coding 2931555,2931375,2931227,2931061,2930565 2931886,2931465,2931274,2931150,2930953 Gene ID= ENSG00000109736.14 TPM= 4.53 Transcript Type= retained_intron chr4 2930611 2934834 2930611 2934834 - ENST00000507555.1@MFSD10 ENST00000507555.1 protein_coding 2934769,2933753,2933567,2933106,2932600,2932351,2932045,2931825,2931375,2931227,2931061,2930611 2934834,2933944,2933663,2933209,2932758,2932512,2932153,2931936,2931465,2931274,2931150,2930953 Gene ID= ENSG00000109736.14 TPM= 2.72 Transcript Type= protein_coding chr4 2934896 2940507 2934896 2940507 + transcript491.chr4.nic@NOP14-AS1 transcript491.chr4.nic antisense_RNA 2934896,2937975,2938693,2940302 2937844,2938142,2938792,2940507 Gene ID= ENSG00000249673.6 TPM= 15.39 Transcript Type= NA chr4 2937941 2963419 2937941 2963419 - transcript462.chr4.nnic@NOP14 transcript462.chr4.nnic protein_coding 2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938644,2937941 2963419,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938418 Gene ID= ENSG00000087269.15 TPM= 4.26 Transcript Type= NA chr4 2937944 2963419 2937944 2963419 - transcript463.chr4.nnic@NOP14 transcript463.chr4.nnic protein_coding 2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938805,2937944 2963419,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938327 Gene ID= ENSG00000087269.15 TPM= 4.26 Transcript Type= NA chr4 2937952 2963356 2937952 2963356 - ENST00000502735.5@NOP14 ENST00000502735.5 protein_coding 2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939535,2937952 2963356,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2938327 Gene ID= ENSG00000087269.15 TPM= 1.99 Transcript Type= protein_coding chr4 2937933 2963385 2937933 2963385 - ENST00000416614.6@NOP14 ENST00000416614.6 protein_coding 2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2937933 2963385,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930 Gene ID= ENSG00000087269.15 TPM= 19.65 Transcript Type= protein_coding chr4 2937942 2963368 2937942 2963368 - ENST00000314262.10@NOP14 ENST00000314262.10 protein_coding 2963125,2957606,2956670,2954424,2953511,2952275,2951114,2949934,2948278,2947526,2946412,2945128,2944073,2942192,2941582,2939527,2939188,2938812,2937942 2963368,2957740,2956811,2954563,2953645,2952397,2951245,2950213,2948408,2947611,2946547,2945229,2944226,2942351,2941729,2939645,2939343,2938930,2938188 Gene ID= ENSG00000087269.15 TPM= 2.44 Transcript Type= protein_coding chr4 3074681 3243959 3074681 3243959 + ENST00000355072.9@HTT ENST00000355072.9 protein_coding 3074681,3086939,3099274,3103824,3105357,3107285,3115304,3116085,3121228,3122889,3125549,3127264,3129924,3130305,3131286,3131638,3132562,3132814,3134401,3135904,3136226,3140510,3142766,3145152,3146797,3148005,3154293,3157072,3160282,3172320,3172908,3174721,3174946,3177332,3178298,3180515,3182354,3186597,3187651,3188951,3199732,3204007,3206496,3206807,3207281,3208773,3209827,3211929,3212564,3213958,3215110,3217765,3220182,3222387,3223406,3223992,3225661,3228615,3228880,3229887,3233163,3235284,3235565,3236149,3238447,3238818,3239846 3075088,3087022,3099394,3103883,3105436,3107423,3115445,3116263,3121432,3122936,3125629,3127604,3130047,3130423,3131397,3131775,3132720,3132911,3134540,3135967,3136326,3140656,3142886,3145228,3146948,3148207,3154419,3157199,3160392,3172397,3173131,3174799,3175107,3177387,3178446,3180651,3182470,3186719,3187886,3189093,3199939,3204148,3206675,3206983,3207357,3208911,3209949,3212142,3212709,3214135,3215211,3217952,3220308,3222487,3223560,3224131,3225743,3228745,3229009,3230042,3233353,3235398,3235778,3236254,3238609,3238978,3243959 Gene ID= ENSG00000197386.10 TPM= 4.53 Transcript Type= protein_coding chr4 3292989 3439911 3292989 3439911 + transcript496.chr4.nnic@RGS12 transcript496.chr4.nnic protein_coding 3292989,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3428558,3430407,3439455 3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3428711,3430955,3439911 Gene ID= ENSG00000159788.18 TPM= 6.97 Transcript Type= NA chr4 3292989 3432173 3292989 3432173 + transcript498.chr4.nnic@RGS12 transcript498.chr4.nnic protein_coding 3292989,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3428558,3430407 3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3428711,3432173 Gene ID= ENSG00000159788.18 TPM= 3.8 Transcript Type= NA chr4 3292989 3439911 3292989 3439911 + transcript499.chr4.nnic@RGS12 transcript499.chr4.nnic protein_coding 3292989,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3430407,3439455 3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3430955,3439911 Gene ID= ENSG00000159788.18 TPM= 5.16 Transcript Type= NA chr4 3292989 3432176 3292989 3432176 + transcript502.chr4.nnic@RGS12 transcript502.chr4.nnic protein_coding 3292989,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3430407 3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3432176 Gene ID= ENSG00000159788.18 TPM= 4.71 Transcript Type= NA chr4 3292972 3432176 3292972 3432176 + transcript505.chr4.nic@RGS12 transcript505.chr4.nic protein_coding 3292972,3342937,3386416,3414072,3414752,3415978,3416913,3417388,3420642,3422376,3422905,3423515,3425464,3428090,3430407 3293099,3343053,3386437,3414241,3414844,3416121,3417092,3417541,3420718,3422570,3422978,3423641,3425560,3428169,3432176 Gene ID= ENSG00000159788.18 TPM= 4.53 Transcript Type= NA chr4 3292989 3419018 3292989 3419018 + transcript509.chr4.nnic@RGS12 transcript509.chr4.nnic protein_coding 3292989,3316070,3342937,3386416,3414072,3414752,3415978,3416913,3417388 3293099,3318051,3343053,3386437,3414241,3414844,3416121,3417092,3419018 Gene ID= ENSG00000159788.18 TPM= 1.99 Transcript Type= NA chr4 3463311 3494483 3463311 3494483 + ENST00000507039.5@DOK7 ENST00000507039.5 protein_coding 3463311,3463506,3473406,3476342,3485539,3489677,3492759 3463429,3463551,3473636,3476531,3485658,3489796,3494483 Gene ID= ENSG00000175920.16 TPM= 1.81 Transcript Type= protein_coding chr4 3463311 3494483 3463311 3494483 + ENST00000340083.5@DOK7 ENST00000340083.5 protein_coding 3463311,3463506,3473406,3476342,3485539,3489677,3492759 3463429,3463551,3473636,3476542,3485658,3489796,3494483 Gene ID= ENSG00000175920.16 TPM= 2.72 Transcript Type= protein_coding chr4 3509134 3532480 3509134 3532480 - transcript515.chr4.nnic@LRPAP1 transcript515.chr4.nnic protein_coding 3532209,3524907,3520072,3518871,3518034,3516116,3514752,3511912,3509134 3532480,3525051,3520193,3518991,3518192,3516198,3514928,3513036,3511858 Gene ID= ENSG00000163956.10 TPM= 443.72 Transcript Type= NA chr4 3506376 3532559 3506376 3532559 - ENST00000500728.2@LRPAP1 ENST00000500728.2 protein_coding 3532209,3524907,3520072,3518871,3518034,3516116,3514752,3506376 3532559,3525051,3520193,3518991,3518192,3516198,3514928,3513036 Gene ID= ENSG00000163956.10 TPM= 8.15 Transcript Type= protein_coding chr4 4235542 4248232 4235542 4248232 - transcript525.chr4.nnic@TMEM128 transcript525.chr4.nnic protein_coding 4248106,4246202,4240321,4237827,4235542 4248232,4246343,4240479,4237935,4237077 Gene ID= ENSG00000132406.11 TPM= 1.81 Transcript Type= NA chr4 4235553 4248212 4235553 4248212 - ENST00000382753.4@TMEM128 ENST00000382753.4 protein_coding 4248106,4246202,4240321,4237827,4235553 4248212,4246343,4240479,4237935,4236256 Gene ID= ENSG00000132406.11 TPM= 34.41 Transcript Type= protein_coding chr4 4267701 4290169 4267701 4290169 - ENST00000343470.8@LYAR ENST00000343470.8 protein_coding 4290036,4286519,4283621,4281783,4279642,4279447,4274367,4273583,4268530,4267701 4290169,4286572,4283795,4281897,4279749,4279530,4274769,4273669,4268615,4268023 Gene ID= ENSG00000145220.13 TPM= 5.43 Transcript Type= protein_coding chr4 4290239 4321785 4290239 4321785 + transcript528.chr4.nic@ZBTB49 transcript528.chr4.nic protein_coding 4290239,4299927,4301989,4313041,4315636,4315809,4320640 4290352,4300097,4303091,4313114,4315718,4315970,4321785 Gene ID= ENSG00000168826.15 TPM= 3.62 Transcript Type= NA chr4 4290251 4321786 4290251 4321786 + ENST00000337872.8@ZBTB49 ENST00000337872.8 protein_coding 4290251,4299927,4301989,4306138,4313041,4315636,4315809,4320640 4290352,4300097,4303091,4306184,4313114,4315718,4315970,4321786 Gene ID= ENSG00000168826.15 TPM= 4.53 Transcript Type= protein_coding chr4 4348140 4419058 4348140 4419058 + ENST00000421177.6@HGNC:18790 ENST00000421177.6 protein_coding 4348140,4380983,4385060,4385473,4385857,4387604,4391475,4409573,4417235 4348471,4381073,4385201,4385555,4387173,4387758,4391591,4409683,4419058 Gene ID= ENSG00000168824.14 TPM= 6.34 Transcript Type= protein_coding chr4 4418971 4477598 4418971 4477598 - transcript531.chr4.nnic@STX18 transcript531.chr4.nnic protein_coding 4477528,4471639,4459372,4457423,4457191,4438394,4434770,4425164,4423518,4420864,4418971 4477598,4471706,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129 Gene ID= ENSG00000168818.9 TPM= 2.72 Transcript Type= NA chr4 4418971 4462020 4418971 4462020 - transcript533.chr4.nic@STX18 transcript533.chr4.nic protein_coding 4461906,4459372,4457423,4457191,4438394,4434770,4425164,4423518,4420864,4418971 4462020,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129 Gene ID= ENSG00000168818.9 TPM= 9.96 Transcript Type= NA chr4 4419476 4542063 4419476 4542063 - transcript534.chr4.nic@STX18 transcript534.chr4.nic protein_coding 4541797,4471639,4459372,4457191,4438394,4434770,4425164,4423518,4420864,4419476 4542063,4471706,4459487,4457500,4438509,4434858,4425222,4423587,4420944,4420129 Gene ID= ENSG00000168818.9 TPM= 1.81 Transcript Type= NA chr4 4418968 4542028 4418968 4542028 - ENST00000306200.6@STX18 ENST00000306200.6 protein_coding 4541797,4471639,4459372,4457423,4457191,4438394,4434770,4425164,4423518,4420864,4418968 4542028,4471706,4459487,4457500,4457257,4438509,4434858,4425222,4423587,4420944,4420129 Gene ID= ENSG00000168818.9 TPM= 56.14 Transcript Type= protein_coding chr4 4859666 4863936 4859666 4863936 + ENST00000382723.4@MSX1 ENST00000382723.4 protein_coding 4859666,4862701 4860368,4863936 Gene ID= ENSG00000163132.6 TPM= 13.58 Transcript Type= protein_coding chr4 5562439 5708567 5562439 5708567 - ENST00000344408.9@EVC2 ENST00000344408.9 protein_coding 5708286,5697593,5694335,5691265,5689157,5685370,5681260,5665515,5663107,5640514,5631793,5628559,5625749,5622537,5618478,5615422,5584623,5576240,5574685,5568444,5565258,5562439 5708567,5697647,5694501,5691333,5689343,5685479,5681313,5665649,5663246,5640838,5632032,5628734,5625908,5622991,5618682,5615544,5584850,5576454,5574772,5568640,5565359,5563115 Gene ID= ENSG00000173040.12 TPM= 4.53 Transcript Type= protein_coding chr4 5711197 5814305 5711197 5814305 + ENST00000264956.10@EVC ENST00000264956.10 protein_coding 5711197,5719248,5729307,5731425,5733351,5741716,5745204,5748148,5752836,5753785,5756264,5783552,5793608,5797022,5798586,5801950,5804730,5808201,5809518,5810339,5810953 5711554,5719373,5729390,5731657,5733435,5741814,5745341,5748306,5753052,5753933,5756362,5783764,5793717,5797232,5798792,5802094,5804841,5808327,5809611,5810450,5814305 Gene ID= ENSG00000072840.12 TPM= 2.72 Transcript Type= protein_coding chr4 5820783 5888481 5820783 5888481 - ENST00000397890.6@CRMP1 ENST00000397890.6 protein_coding 5888228,5866668,5861026,5856143,5851408,5849392,5843093,5841308,5839522,5836765,5835915,5828489,5825494,5820783 5888481,5866756,5861210,5856307,5851469,5849472,5843161,5841428,5839678,5836906,5836085,5828668,5825659,5821851 Gene ID= ENSG00000072832.14 TPM= 1.81 Transcript Type= protein_coding chr4 6269832 6303278 6269832 6303278 + transcript553.chr4.nic@WFS1 transcript553.chr4.nic protein_coding 6269832,6277451,6287093,6288987,6291197,6291917,6295005,6300657 6270014,6277687,6287175,6289131,6291367,6291997,6295189,6303278 Gene ID= ENSG00000109501.13 TPM= 13.58 Transcript Type= NA chr4 6269850 6303265 6269850 6303265 + ENST00000226760.5@WFS1 ENST00000226760.5 protein_coding 6269850,6277451,6287093,6288987,6291197,6291917,6295041,6300657 6270014,6277687,6287175,6289131,6291367,6291997,6295189,6303265 Gene ID= ENSG00000109501.13 TPM= 139.45 Transcript Type= protein_coding chr4 6575151 6622402 6575151 6622402 + transcript559.chr4.nnic@MAN2B2 transcript559.chr4.nnic protein_coding 6575151,6576578,6578393,6586996,6589045,6591401,6593173,6594534,6597113,6598198,6600623,6605055,6609107,6609798,6610880,6611086,6614218,6617380,6619927,6621188 6575348,6576724,6578498,6587168,6589160,6591493,6593350,6594732,6597303,6598354,6600756,6605329,6609298,6610050,6610990,6611278,6614355,6617492,6620044,6622402 Gene ID= ENSG00000013288.8 TPM= 21.73 Transcript Type= NA chr4 6640691 6642745 6640691 6642745 + ENST00000382581.4@MRFAP1 ENST00000382581.4 protein_coding 6640691,6641730 6641258,6642745 Gene ID= ENSG00000179010.14 TPM= 282.53 Transcript Type= protein_coding chr4 6670725 6673830 6670725 6673830 - ENST00000515205.1@LINC02482 ENST00000515205.1 lincRNA 6673684,6670725 6673830,6670999 Gene ID= ENSG00000251580.1 TPM= 3.62 Transcript Type= lincRNA chr4 6673451 6676047 6673451 6676047 + ENST00000307533.10@AC093323.1 ENST00000307533.10 lincRNA 6673451,6674993 6674706,6676047 Gene ID= ENSG00000170846.16 TPM= 17.21 Transcript Type= lincRNA chr4 6674088 6676047 6674088 6676047 + ENST00000444232.3@AC093323.1 ENST00000444232.3 lincRNA 6674088,6674993 6674637,6676047 Gene ID= ENSG00000170846.16 TPM= 14.49 Transcript Type= lincRNA chr4 6707701 6709880 6707701 6709880 - ENST00000320848.6@MRFAP1L1 ENST00000320848.6 protein_coding 6709231,6707701 6709880,6708643 Gene ID= ENSG00000178988.10 TPM= 36.22 Transcript Type= protein_coding chr4 6909764 7033123 6909764 7033123 + transcript576.chr4.nic@TBC1D14 transcript576.chr4.nic protein_coding 6909764,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7007524,7009877,7010653,7014448,7025004,7030327 6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7007625,7009948,7010781,7014557,7025262,7033123 Gene ID= ENSG00000132405.18 TPM= 4.75 Transcript Type= NA chr4 6987258 7033123 6987258 7033123 + transcript592.chr4.nnic@TBC1D14 transcript592.chr4.nnic protein_coding 6987258,6994184,6996325,6999085,7001145,7010653,7014448,7025004,7030327 6987349,6994302,6996407,6999202,7001251,7010781,7014557,7025262,7033123 Gene ID= ENSG00000132405.18 TPM= 5.66 Transcript Type= NA chr4 6909444 7033118 6909444 7033118 + ENST00000448507.5@TBC1D14 ENST00000448507.5 protein_coding 6909444,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327 6909505,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033118 Gene ID= ENSG00000132405.18 TPM= 17.88 Transcript Type= protein_coding chr4 6909845 7033111 6909845 7033111 + ENST00000409757.8@TBC1D14 ENST00000409757.8 protein_coding 6909845,6923373,6967304,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327 6909951,6924111,6967424,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033111 Gene ID= ENSG00000132405.18 TPM= 28.75 Transcript Type= protein_coding chr4 6987162 7033114 6987162 7033114 + ENST00000451522.6@TBC1D14 ENST00000451522.6 protein_coding 6987162,6994184,6996325,6999085,7001145,7004844,7006632,7009877,7010653,7014448,7025004,7030327 6987349,6994302,6996407,6999202,7001251,7004924,7006726,7009948,7010781,7014557,7025262,7033114 Gene ID= ENSG00000132405.18 TPM= 35.09 Transcript Type= protein_coding chr4 7043344 7049073 7043344 7049073 + transcript600.chr4.nnic@TADA2B transcript600.chr4.nnic protein_coding 7043344,7048463,7048869 7043849,7048518,7049073 Gene ID= ENSG00000173011.11 TPM= 1.81 Transcript Type= NA chr4 7043391 7057952 7043391 7057952 + ENST00000310074.7@TADA2B ENST00000310074.7 protein_coding 7043391,7054062 7043849,7057952 Gene ID= ENSG00000173011.11 TPM= 124.51 Transcript Type= protein_coding chr4 7058906 7068197 7058906 7068197 - ENST00000264954.4@GRPEL1 ENST00000264954.4 protein_coding 7067971,7064061,7062385,7058906 7068197,7064223,7062466,7061208 Gene ID= ENSG00000109519.12 TPM= 183.83 Transcript Type= protein_coding chr4 7758715 7939926 7758715 7939926 - ENST00000358461.6@AFAP1 ENST00000358461.6 protein_coding 7939656,7871952,7868622,7855466,7843139,7838524,7819076,7816018,7809614,7800442,7793681,7786194,7778762,7774739,7772820,7768844,7758715 7939926,7872080,7868719,7855574,7843350,7838703,7819171,7816099,7809763,7800653,7793826,7786311,7778876,7774903,7773010,7769008,7763791 Gene ID= ENSG00000196526.10 TPM= 7.24 Transcript Type= protein_coding chr4 7965313 8158873 7965313 8158873 - transcript611.chr4.nic@ABLIM2 transcript611.chr4.nic protein_coding 8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8009050,8008059,7992866,7984839,7983547,7983264,7965313 8158873,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8009102,8008200,7992927,7984893,7983554,7983344,7967103 Gene ID= ENSG00000163995.19 TPM= 5.21 Transcript Type= NA chr4 7965313 8158873 7965313 8158873 - transcript615.chr4.nic@ABLIM2 transcript615.chr4.nic protein_coding 8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8032648,8029656,8009050,8008059,7983547,7983264,7965313 8158873,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8032680,8029776,8009102,8008200,7983554,7983344,7967103 Gene ID= ENSG00000163995.19 TPM= 2.49 Transcript Type= NA chr4 7965313 8158873 7965313 8158873 - transcript619.chr4.nic@ABLIM2 transcript619.chr4.nic protein_coding 8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8009050,8008059,7983547,7983264,7965313 8158873,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8009102,8008197,7983554,7983344,7967103 Gene ID= ENSG00000163995.19 TPM= 3.4 Transcript Type= NA chr4 8007032 8158873 8007032 8158873 - transcript623.chr4.nic@ABLIM2 transcript623.chr4.nic protein_coding 8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8029656,8009050,8007032 8158873,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8029776,8009102,8008197 Gene ID= ENSG00000163995.19 TPM= 1.81 Transcript Type= NA chr4 8003583 8010754 8003583 8010754 - transcript631.chr4.nic@ABLIM2 transcript631.chr4.nic protein_coding 8010430,8009050,8003583 8010754,8009102,8008197 Gene ID= ENSG00000163995.19 TPM= 2.72 Transcript Type= NA chr4 7965312 8158811 7965312 8158811 - ENST00000361737.9@ABLIM2 ENST00000361737.9 protein_coding 8158680,8106494,8097099,8088169,8080676,8077628,8060967,8054188,8045164,8036149,8032648,8029656,8009050,8008059,7983547,7983264,7965312 8158811,8106637,8097282,8088284,8080802,8077721,8061054,8054246,8045241,8036295,8032680,8029776,8009102,8008197,7983554,7983344,7967103 Gene ID= ENSG00000163995.19 TPM= 3.4 Transcript Type= protein_coding chr4 8199285 8241104 8199285 8241104 + transcript637.chr4.nic@SH3TC1 transcript637.chr4.nic protein_coding 8199285,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698 8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219449,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241104 Gene ID= ENSG00000125089.16 TPM= 2.26 Transcript Type= NA chr4 8199285 8241104 8199285 8241104 + transcript639.chr4.nic@SH3TC1 transcript639.chr4.nic protein_coding 8199285,8205167,8209665,8212701,8214475,8216111,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698 8199405,8205366,8209822,8212828,8214580,8216257,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241104 Gene ID= ENSG00000125089.16 TPM= 2.26 Transcript Type= NA chr4 8199367 8241103 8199367 8241103 + ENST00000245105.7@SH3TC1 ENST00000245105.7 protein_coding 8199367,8205167,8209748,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698 8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241103 Gene ID= ENSG00000125089.16 TPM= 4.98 Transcript Type= protein_coding chr4 8199371 8241091 8199371 8241091 + ENST00000515682.5@SH3TC1 ENST00000515682.5 protein_coding 8199371,8205167,8209665,8212701,8214475,8216111,8216957,8218271,8219335,8222840,8225175,8226980,8231976,8233363,8235433,8236278,8237474,8240698 8199405,8205366,8209822,8212828,8214580,8216257,8217167,8218347,8219530,8222970,8225216,8228644,8232156,8233513,8235555,8236428,8237670,8241091 Gene ID= ENSG00000125089.16 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr4 8269750 8307103 8269750 8307103 + transcript646.chr4.nnic@HTRA3 transcript646.chr4.nnic protein_coding 8269750,8282437,8286561,8291370,8292321,8294087,8302463,8304173,8305971 8270353,8282536,8286783,8291564,8292353,8294201,8302511,8304279,8307103 Gene ID= ENSG00000170801.9 TPM= 1.81 Transcript Type= NA chr4 8269750 8296476 8269750 8296476 + transcript649.chr4.nnic@HTRA3 transcript649.chr4.nnic protein_coding 8269750,8282437,8286561,8291370,8292321,8294087,8295765 8270353,8282536,8286783,8291564,8292353,8294201,8296476 Gene ID= ENSG00000170801.9 TPM= 1.81 Transcript Type= NA chr4 8269765 8307111 8269765 8307111 + ENST00000307358.6@HTRA3 ENST00000307358.6 protein_coding 8269765,8282437,8286561,8291370,8292321,8294087,8302463,8304184,8305971 8270353,8282536,8286783,8291564,8292353,8294201,8302511,8304279,8307111 Gene ID= ENSG00000170801.9 TPM= 12.68 Transcript Type= protein_coding chr4 8269777 8296474 8269777 8296474 + ENST00000382512.3@HTRA3 ENST00000382512.3 protein_coding 8269777,8282437,8286561,8291370,8292321,8294087,8295695 8270353,8282536,8286783,8291564,8292353,8294201,8296474 Gene ID= ENSG00000170801.9 TPM= 2.72 Transcript Type= protein_coding chr4 8366259 8428500 8366259 8428500 - transcript652.chr4.nic@ACOX3 transcript652.chr4.nic protein_coding 8428351,8416378,8415766,8414854,8414292,8410212,8405955,8399556,8396937,8394620,8392333,8389612,8389173,8381492,8374978,8370908,8366259 8428500,8416535,8415999,8414928,8414381,8410355,8406043,8399652,8397119,8394742,8392453,8389734,8389286,8381607,8375152,8370994,8367080 Gene ID= ENSG00000087008.15 TPM= 10.87 Transcript Type= NA chr4 8366282 8440711 8366282 8440711 - ENST00000356406.9@ACOX3 ENST00000356406.9 protein_coding 8440648,8416378,8415766,8414854,8414292,8410212,8405955,8399556,8396937,8394620,8392333,8389612,8389173,8381492,8374978,8373561,8370908,8366282 8440711,8416535,8415999,8414928,8414381,8410355,8406043,8399652,8397119,8394742,8392453,8389734,8389286,8381607,8375152,8373628,8370994,8367080 Gene ID= ENSG00000087008.15 TPM= 14.49 Transcript Type= protein_coding chr4 8440823 8476526 8440823 8476526 + ENST00000389737.4@TRMT44 ENST00000389737.4 protein_coding 8440823,8446476,8449669,8451960,8452882,8454742,8463985,8465378,8467914,8471084,8475772 8441441,8446590,8449888,8452028,8452989,8454813,8464091,8465561,8468346,8471200,8476526 Gene ID= ENSG00000155275.18 TPM= 7.24 Transcript Type= protein_coding chr4 9823440 10029135 9823440 10029135 - transcript667.chr4.nic@SLC2A9 transcript667.chr4.nic protein_coding 10029018,10025904,10018975,9996781,9985669,9980592,9941913,9920385,9908235,9890610,9887567,9834881,9823440 10029135,10026006,10019073,9996941,9985793,9980737,9942045,9920572,9908345,9890711,9887642,9835008,9826600 Gene ID= ENSG00000109667.11 TPM= 8.15 Transcript Type= NA chr4 9826224 10021483 9826224 10021483 - ENST00000264784.7@SLC2A9 ENST00000264784.7 protein_coding 10021280,10018975,9996781,9985669,9980592,9941913,9920385,9908235,9890610,9887567,9834881,9826224 10021483,10019073,9996941,9985793,9980737,9942045,9920572,9908345,9890711,9887642,9835008,9826600 Gene ID= ENSG00000109667.11 TPM= 6.34 Transcript Type= protein_coding chr4 10074339 10116860 10074339 10116860 - ENST00000499869.6@WDR1 ENST00000499869.6 protein_coding 10116651,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084443,10083022,10081357,10078891,10077753,10077304,10074339 10116860,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083178,10081444,10079001,10077926,10077448,10075484 Gene ID= ENSG00000071127.16 TPM= 235.89 Transcript Type= protein_coding chr4 10074340 10116949 10074340 10116949 - ENST00000382452.6@WDR1 ENST00000382452.6 protein_coding 10116651,10116113,10103896,10098992,10097711,10088664,10088293,10087707,10084441,10083022,10081357,10078891,10077753,10077304,10074340 10116949,10116234,10103986,10099139,10097891,10088741,10088373,10087940,10084530,10083176,10081444,10079001,10077926,10077448,10075484 Gene ID= ENSG00000071127.16 TPM= 52.07 Transcript Type= protein_coding chr4 10439882 10457434 10439882 10457434 - transcript691.chr4.nnic@ZNF518B transcript691.chr4.nnic protein_coding 10457317,10454594,10439882 10457434,10454988,10446539 Gene ID= ENSG00000178163.7 TPM= 1.81 Transcript Type= NA chr4 11393150 11429765 11393150 11429765 - ENST00000002596.5@HS3ST1 ENST00000002596.5 protein_coding 11428699,11393150 11429765,11400113 Gene ID= ENSG00000002587.9 TPM= 5.43 Transcript Type= protein_coding chr4 13367724 13484365 13367724 13484365 - ENST00000288723.8@RAB28 ENST00000288723.8 protein_coding 13484076,13479430,13474318,13460699,13381491,13376545,13369871,13367724 13484365,13479526,13474406,13460828,13381594,13376622,13369965,13368650 Gene ID= ENSG00000157869.14 TPM= 5.73 Transcript Type= protein_coding chr4 13367725 13484365 13367725 13484365 - ENST00000338176.8@RAB28 ENST00000338176.8 protein_coding 13484076,13479430,13474318,13460699,13381491,13376545,13371795,13367725 13484365,13479526,13474406,13460828,13381594,13376622,13371867,13368650 Gene ID= ENSG00000157869.14 TPM= 1.2 Transcript Type= protein_coding chr4 13367724 13484365 13367724 13484365 - ENST00000330852.9@RAB28 ENST00000330852.9 protein_coding 13484076,13479430,13474318,13460699,13381491,13376545,13367724 13484365,13479526,13474406,13460828,13381594,13376622,13368650 Gene ID= ENSG00000157869.14 TPM= 18.41 Transcript Type= protein_coding chr4 13568738 13627723 13568738 13627723 - ENST00000040738.9@BOD1L1 ENST00000040738.9 protein_coding 13627345,13619943,13615312,13614196,13613512,13610934,13609295,13608530,13607117,13598946,13597104,13595860,13591923,13590386,13588722,13587699,13586396,13582652,13582237,13581132,13581020,13579928,13577582,13577403,13576838,13568738 13627723,13620067,13615502,13614810,13613661,13611100,13609406,13608668,13607189,13605084,13597168,13595944,13591966,13590446,13588792,13587771,13586475,13582736,13582310,13581207,13581054,13579973,13577631,13577487,13576991,13570128 Gene ID= ENSG00000038219.12 TPM= 4.53 Transcript Type= protein_coding chr4 15002674 15070153 15002674 15070153 + ENST00000442003.6@CPEB2 ENST00000442003.6 protein_coding 15002674,15007305,15017188,15033161,15040464,15052414,15054128,15058421,15059187,15062079,15066153 15004335,15007595,15017278,15033211,15040487,15052584,15054217,15058539,15059301,15062260,15070153 Gene ID= ENSG00000137449.15 TPM= 2.72 Transcript Type= protein_coding chr4 15469868 15601549 15469868 15601549 + transcript709.chr4.nic@CC2D2A transcript709.chr4.nic protein_coding 15469868,15475915,15478723,15480704,15502429,15502822,15510139,15511247,15514707,15515868,15516625,15527447,15528620,15533193,15536920,15537899,15540837,15550824,15553158,15555072,15557304,15559165,15560531,15563355,15567377,15567677,15569293,15570398,15574150,15579968,15586157,15587816,15589545,15596085,15597407,15599529,15601237 15470057,15475971,15478806,15480827,15502517,15502923,15510240,15511423,15514869,15516004,15516756,15527656,15528726,15533333,15537076,15538137,15541014,15550980,15553305,15555210,15557507,15559257,15560622,15563522,15567482,15567786,15569389,15570496,15574326,15580171,15586246,15587929,15589679,15596207,15597465,15599706,15601549 Gene ID= ENSG00000048342.15 TPM= 1.81 Transcript Type= NA chr4 15604539 15655412 15604539 15655412 - ENST00000341285.7@FBXL5 ENST00000341285.7 protein_coding 15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15604539 15655412,15644708,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799 Gene ID= ENSG00000118564.14 TPM= 104.59 Transcript Type= protein_coding chr4 15605006 15655382 15605006 15655382 - ENST00000412094.6@FBXL5 ENST00000412094.6 protein_coding 15655204,15644493,15640788,15638508,15636494,15630666,15627885,15626873,15625252,15612266,15605006 15655382,15644657,15640883,15638694,15636676,15630791,15628033,15626955,15625977,15612414,15605799 Gene ID= ENSG00000118564.14 TPM= 14.04 Transcript Type= protein_coding chr4 15681823 15686606 15681823 15686606 + ENST00000514803.1@FAM200B ENST00000514803.1 protein_coding 15681823,15684886,15686236 15681901,15684959,15686606 Gene ID= ENSG00000237765.6 TPM= 1.81 Transcript Type= processed_transcript chr4 15681729 15690439 15681729 15690439 + ENST00000622362.1@FAM200B ENST00000622362.1 protein_coding 15681729,15686236 15681901,15690439 Gene ID= ENSG00000237765.6 TPM= 20.83 Transcript Type= protein_coding chr4 15703037 15738301 15703037 15738301 + transcript727.chr4.nic@BST1 transcript727.chr4.nic protein_coding 15703037,15705515,15707511,15711807,15715285,15715707,15718907,15722875,15737787 15703332,15705641,15707646,15711889,15715361,15715799,15718993,15722934,15738301 Gene ID= ENSG00000109743.10 TPM= 1.81 Transcript Type= NA chr4 15778278 15853230 15778278 15853230 + ENST00000226279.7@CD38 ENST00000226279.7 protein_coding 15778278,15816511,15824881,15834217,15838092,15840026,15840452,15848539 15778647,15816640,15825016,15834302,15838165,15840118,15840538,15853230 Gene ID= ENSG00000004468.12 TPM= 8.15 Transcript Type= protein_coding chr4 16161296 16227144 16161296 16227144 - transcript731.chr4.nic@TAPT1 transcript731.chr4.nic protein_coding 16226259,16213768,16202462,16196658,16191361,16188220,16186781,16186535,16179577,16176119,16174670,16174204,16170653,16166633,16161296 16227144,16213898,16202580,16196723,16191523,16188355,16186878,16186604,16179657,16176228,16174729,16174272,16170729,16166793,16163537 Gene ID= ENSG00000169762.16 TPM= 5.43 Transcript Type= NA chr4 16160505 16226541 16160505 16226541 - ENST00000405303.6@TAPT1 ENST00000405303.6 protein_coding 16226259,16213768,16202462,16191361,16188220,16186781,16186535,16179577,16176119,16174670,16174204,16170653,16166633,16160505 16226541,16213898,16202580,16191523,16188355,16186878,16186604,16179657,16176228,16174729,16174272,16170729,16166793,16163537 Gene ID= ENSG00000169762.16 TPM= 77.88 Transcript Type= protein_coding chr4 16501544 16898637 16501544 16898637 - transcript752.chr4.nnic@LDB2 transcript752.chr4.nnic protein_coding 16898354,16759158,16595703,16588710,16585922,16511981,16508541,16505840,16501544 16898637,16759260,16595875,16588832,16586005,16512104,16508686,16505982,16502873 Gene ID= ENSG00000169744.12 TPM= 5.43 Transcript Type= NA chr4 16501541 16898809 16501541 16898809 - ENST00000304523.9@LDB2 ENST00000304523.9 protein_coding 16898354,16759158,16595703,16588710,16585922,16511981,16508535,16501541 16898809,16759260,16595875,16588832,16586005,16512104,16508686,16502873 Gene ID= ENSG00000169744.12 TPM= 15.39 Transcript Type= protein_coding chr4 16501546 16898634 16501546 16898634 - ENST00000502640.5@LDB2 ENST00000502640.5 protein_coding 16898354,16759158,16595703,16588710,16585922,16511981,16508535,16501546 16898634,16759260,16595875,16588832,16586005,16512104,16508686,16503131 Gene ID= ENSG00000169744.12 TPM= 1.81 Transcript Type= protein_coding chr4 16501541 16898594 16501541 16898594 - ENST00000441778.6@LDB2 ENST00000441778.6 protein_coding 16898354,16759158,16595703,16588710,16585922,16511981,16508535,16505840,16501541 16898594,16759260,16595875,16588832,16586005,16512104,16508686,16505982,16502873 Gene ID= ENSG00000169744.12 TPM= 8.15 Transcript Type= protein_coding chr4 17486398 17512234 17486398 17512234 - ENST00000281243.9@QDPR ENST00000281243.9 protein_coding 17511950,17509271,17504379,17501719,17492232,17490662,17486398 17512234,17509363,17504475,17501859,17492340,17490745,17487236 Gene ID= ENSG00000151552.11 TPM= 155.75 Transcript Type= protein_coding chr4 17486398 17512069 17486398 17512069 - ENST00000507439.5@QDPR ENST00000507439.5 protein_coding 17511950,17509271,17504379,17501719,17490662,17486398 17512069,17509363,17504475,17501859,17490745,17487236 Gene ID= ENSG00000151552.11 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr4 17486527 17512086 17486527 17512086 - ENST00000428702.6@QDPR ENST00000428702.6 protein_coding 17511950,17504379,17501719,17492232,17490662,17486527 17512086,17504475,17501859,17492340,17490745,17487236 Gene ID= ENSG00000151552.11 TPM= 2.72 Transcript Type= protein_coding chr4 17614631 17634105 17614631 17634105 + ENST00000237380.11@MED28 ENST00000237380.11 protein_coding 17614631,17619901,17621587,17623601 17614813,17619967,17621699,17634105 Gene ID= ENSG00000118579.12 TPM= 32.6 Transcript Type= protein_coding chr4 22345072 22516091 22345072 22516091 - transcript800.chr4.nic@ADGRA3 transcript800.chr4.nic protein_coding 22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22346733,22345072 22516091,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413760,22413390,22402799,22401554,22392690,22389183,22346823,22345345 Gene ID= ENSG00000152990.13 TPM= 2.72 Transcript Type= NA chr4 22387375 22516091 22387375 22516091 - transcript804.chr4.nic@ADGRA3 transcript804.chr4.nic protein_coding 22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22392545,22389088,22387375 22516091,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22392690,22389183,22388947 Gene ID= ENSG00000152990.13 TPM= 1.81 Transcript Type= NA chr4 22387375 22516054 22387375 22516054 - ENST00000334304.9@ADGRA3 ENST00000334304.9 protein_coding 22515528,22473772,22461737,22454866,22447440,22444973,22442650,22438256,22436440,22435311,22424191,22420886,22413601,22413182,22402675,22401431,22392545,22389088,22387375 22516054,22473843,22461808,22454937,22447511,22445133,22442863,22438420,22436641,22435466,22424352,22421089,22413814,22413390,22402799,22401554,22392690,22389183,22388947 Gene ID= ENSG00000152990.13 TPM= 17.21 Transcript Type= protein_coding chr4 24527467 24584570 24527467 24584570 - transcript814.chr4.nic@DHX15 transcript814.chr4.nic protein_coding 24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24537051,24532864,24529601,24527467 24584570,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24533054,24529770,24528041 Gene ID= ENSG00000109606.12 TPM= 4.53 Transcript Type= NA chr4 24527475 24584550 24527475 24584550 - ENST00000336812.4@DHX15 ENST00000336812.4 protein_coding 24584323,24576243,24570654,24556251,24554725,24548855,24542940,24541873,24540840,24540108,24537051,24532864,24529601,24527475 24584550,24576678,24570847,24556410,24554943,24549022,24543026,24542022,24540948,24540299,24537173,24533054,24529770,24528041 Gene ID= ENSG00000109606.12 TPM= 111.38 Transcript Type= protein_coding chr4 24795439 24800848 24795439 24800848 + transcript815.chr4.nnic@SOD3 transcript815.chr4.nnic protein_coding 24795439,24799506,24800619 24795651,24800528,24800848 Gene ID= ENSG00000109610.5 TPM= 13.58 Transcript Type= NA chr4 25122041 25160445 25122041 25160445 - transcript822.chr4.nic@SEPSECS transcript822.chr4.nic protein_coding 25158953,25156856,25156037,25154998,25151960,25145004,25144774,25127264,25125694,25122041 25160445,25156974,25156195,25155151,25152062,25145133,25144865,25127357,25125784,25124225 Gene ID= ENSG00000109618.11 TPM= 1.81 Transcript Type= NA chr4 25120014 25160442 25120014 25160442 - ENST00000382103.6@SEPSECS ENST00000382103.6 protein_coding 25160256,25158953,25156856,25156037,25154998,25151960,25145004,25144774,25127264,25125694,25120014 25160442,25159107,25156974,25156195,25155151,25152062,25145133,25144865,25127357,25125784,25124225 Gene ID= ENSG00000109618.11 TPM= 8.15 Transcript Type= protein_coding chr4 25160641 25161687 25160641 25161687 + ENST00000510415.1@AC104662.3 ENST00000510415.1 antisense_RNA 25160641,25161418 25160753,25161687 Gene ID= ENSG00000281501.1 TPM= 4.53 Transcript Type= antisense_RNA chr4 25233954 25279091 25233954 25279091 + transcript825.chr4.nnic@PI4K2B transcript825.chr4.nnic protein_coding 25233954,25252321,25255065,25256543,25259052,25260524,25263750,25268443,25269144,25277014 25234431,25252475,25255265,25256674,25259190,25260591,25263849,25268576,25269203,25279091 Gene ID= ENSG00000038210.12 TPM= 2.72 Transcript Type= NA chr4 25233975 25279092 25233975 25279092 + ENST00000264864.7@PI4K2B ENST00000264864.7 protein_coding 25233975,25252321,25255065,25256543,25259037,25260524,25263750,25268443,25269144,25277014 25234431,25252475,25255265,25256674,25259190,25260591,25263849,25268576,25269203,25279092 Gene ID= ENSG00000038210.12 TPM= 35.32 Transcript Type= protein_coding chr4 25312774 25366116 25312774 25366116 + transcript833.chr4.nic@ZCCHC4 transcript833.chr4.nic protein_coding 25312774,25314046,25315318,25333183,25333908,25345548,25349492,25351589,25361859,25362226,25364454,25365022 25312936,25314164,25315400,25333458,25333988,25345620,25349642,25351689,25361980,25362301,25364505,25366116 Gene ID= ENSG00000168228.14 TPM= 2.72 Transcript Type= NA chr4 25312774 25370039 25312774 25370039 + transcript835.chr4.nnic@ZCCHC4 transcript835.chr4.nnic protein_coding 25312774,25314046,25315318,25333183,25333908,25345548,25361859,25362226,25364454,25365022,25369029 25312936,25314164,25315400,25333458,25333988,25345620,25361980,25362301,25364505,25365166,25370039 Gene ID= ENSG00000168228.14 TPM= 1.81 Transcript Type= NA chr4 25312786 25370383 25312786 25370383 + ENST00000302874.8@ZCCHC4 ENST00000302874.8 protein_coding 25312786,25314046,25315318,25333183,25333908,25345548,25349492,25351589,25361859,25362226,25364454,25365022,25369029 25312936,25314164,25315400,25333458,25333988,25345620,25349642,25351689,25361980,25362301,25364505,25365166,25370383 Gene ID= ENSG00000168228.14 TPM= 11.77 Transcript Type= protein_coding chr4 25377255 25418523 25377255 25418523 + transcript837.chr4.nic@ANAPC4 transcript837.chr4.nic protein_coding 25377255,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155 25377344,25377556,25380445,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418523 Gene ID= ENSG00000053900.10 TPM= 1.81 Transcript Type= NA chr4 25377255 25418499 25377255 25418499 + transcript838.chr4.nnic@ANAPC4 transcript838.chr4.nnic protein_coding 25377255,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415400,25416425,25417616,25418155 25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418499 Gene ID= ENSG00000053900.10 TPM= 2.72 Transcript Type= NA chr4 25377253 25418497 25377253 25418497 + transcript841.chr4.nnic@ANAPC4 transcript841.chr4.nnic protein_coding 25377253,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392375,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155 25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418497 Gene ID= ENSG00000053900.10 TPM= 1.81 Transcript Type= NA chr4 25377260 25418497 25377260 25418497 + transcript843.chr4.nic@ANAPC4 transcript843.chr4.nic protein_coding 25377260,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155 25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405619,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418497 Gene ID= ENSG00000053900.10 TPM= 4.53 Transcript Type= NA chr4 25377293 25418489 25377293 25418489 + ENST00000510092.5@ANAPC4 ENST00000510092.5 protein_coding 25377293,25377418,25380374,25383261,25388500,25388717,25388838,25390136,25390911,25392338,25393805,25394310,25394671,25394829,25396664,25396848,25402971,25405573,25406829,25407197,25409698,25413645,25414324,25414466,25414599,25415466,25416425,25417616,25418155 25377344,25377556,25380479,25383393,25388574,25388743,25388882,25390220,25391015,25392421,25393891,25394374,25394713,25394905,25396764,25396899,25403026,25405622,25406885,25407253,25409791,25413742,25414385,25414504,25414700,25415540,25416598,25417739,25418489 Gene ID= ENSG00000053900.10 TPM= 1.81 Transcript Type= protein_coding chr4 25747427 25862959 25747427 25862959 - ENST00000399878.7@SEL1L3 ENST00000399878.7 protein_coding 25862675,25847294,25835197,25833448,25832995,25830098,25821996,25819808,25818138,25804541,25802283,25790455,25788224,25784228,25782242,25779076,25776277,25767740,25767525,25765326,25758941,25757688,25757534,25747427 25862959,25847864,25835323,25833569,25833110,25830156,25822128,25819940,25818278,25804752,25802462,25790574,25788364,25784290,25782418,25779203,25776360,25767830,25767609,25765435,25759068,25757790,25757606,25748564 Gene ID= ENSG00000091490.10 TPM= 14.49 Transcript Type= protein_coding chr4 26319710 26435128 26319710 26435128 + ENST00000342295.5@RBPJ ENST00000342295.5 protein_coding 26319710,26320700,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692 26319888,26320815,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26435128 Gene ID= ENSG00000168214.20 TPM= 9.96 Transcript Type= protein_coding chr4 26320807 26435128 26320807 26435128 + ENST00000355476.7@RBPJ ENST00000355476.7 protein_coding 26320807,26362446,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430419,26430692 26321048,26362628,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430053,26430522,26435128 Gene ID= ENSG00000168214.20 TPM= 30.79 Transcript Type= protein_coding chr4 26320811 26432074 26320811 26432074 + transcript865.chr4.nic@RBPJ transcript865.chr4.nic protein_coding 26320811,26386353,26406175,26415475,26420551,26424342,26424631,26428720,26429898,26430692 26321048,26386391,26406270,26415640,26420725,26424479,26424743,26428860,26430522,26432074 Gene ID= ENSG00000168214.20 TPM= 10.87 Transcript Type= NA chr4 26857582 27024184 26857582 27024184 + transcript874.chr4.nnic@STIM2 transcript874.chr4.nnic protein_coding 26857582,26919504,26957612,26995377,26999230,27002217,27002927,27007533,27008428,27008764,27017711,27022519 26858347,26919634,26957726,26995490,26999347,27002394,27003104,27007700,27008528,27009002,27017984,27024184 Gene ID= ENSG00000109689.15 TPM= 1.81 Transcript Type= NA chr4 26860691 27025381 26860691 27025381 + ENST00000467087.5@STIM2 ENST00000467087.5 protein_coding 26860691,26919504,26957612,26995379,26999232,27002217,27002927,27007533,27008428,27008764,27017711,27022519 26861369,26919634,26957726,26995490,26999347,27002394,27003104,27007700,27008528,27009002,27017984,27025381 Gene ID= ENSG00000109689.15 TPM= 19.92 Transcript Type= protein_coding chr4 26859806 26860581 26859806 26860581 - ENST00000489096.5@AC106047.1 ENST00000489096.5 antisense_RNA 26860510,26859806 26860581,26860028 Gene ID= ENSG00000240005.5 TPM= 2.72 Transcript Type= antisense_RNA chr4 37826686 37862978 37826686 37862978 + transcript884.chr4.nic@PGM2 transcript884.chr4.nic protein_coding 37826686,37829964,37834618,37837529,37839848,37840066,37845633,37846931,37847202,37848522,37850184,37855608,37861510 37826813,37830131,37834724,37837613,37839931,37840259,37845730,37847111,37847295,37848651,37850373,37855741,37862978 Gene ID= ENSG00000169299.13 TPM= 1.81 Transcript Type= NA chr4 37826707 37862088 37826707 37862088 + transcript885.chr4.nic@PGM2 transcript885.chr4.nic protein_coding 37826707,37829964,37834618,37837529,37839848,37840066,37844364,37845633,37846931,37850184,37855608,37861510 37826813,37830131,37834724,37837613,37839931,37840259,37844553,37845730,37848651,37850373,37855741,37862088 Gene ID= ENSG00000169299.13 TPM= 2.72 Transcript Type= NA chr4 37826633 37862937 37826633 37862937 + ENST00000381967.8@PGM2 ENST00000381967.8 protein_coding 37826633,37829964,37834618,37837529,37839848,37840066,37844364,37845633,37846931,37847202,37848522,37850184,37855608,37861510 37826813,37830131,37834724,37837613,37839931,37840259,37844553,37845730,37847111,37847295,37848651,37850373,37855741,37862937 Gene ID= ENSG00000169299.13 TPM= 75.16 Transcript Type= protein_coding chr4 37977297 38139172 37977297 38139172 + transcript889.chr4.nic@TBC1D1 transcript889.chr4.nic protein_coding 37977297,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135 37977529,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38139172 Gene ID= ENSG00000065882.15 TPM= 15.39 Transcript Type= NA chr4 37891087 38139173 37891087 38139173 + ENST00000261439.8@TBC1D1 ENST00000261439.8 protein_coding 37891087,37902003,38014509,38018354,38020591,38021586,38027788,38035588,38044362,38045817,38049618,38054199,38089932,38095929,38102999,38115710,38118033,38124962,38133084,38137135 37891348,37902512,38014973,38018443,38020695,38021718,38027879,38035698,38044490,38045903,38049898,38054338,38090117,38096090,38103157,38115954,38118192,38125131,38133257,38139173 Gene ID= ENSG00000065882.15 TPM= 5.43 Transcript Type= protein_coding chr4 38664196 38701042 38664196 38701042 + ENST00000261438.9@KLF3 ENST00000261438.9 protein_coding 38664196,38680587,38688585,38689729,38694746,38697082 38664461,38680682,38689071,38689879,38694906,38701042 Gene ID= ENSG00000109787.12 TPM= 19.92 Transcript Type= protein_coding chr4 38867719 38945743 38867719 38945743 + transcript899.chr4.nic@FAM114A1 transcript899.chr4.nic protein_coding 38867719,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456 38867834,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38945743 Gene ID= ENSG00000197712.11 TPM= 36.22 Transcript Type= NA chr4 38867780 38915178 38867780 38915178 + transcript906.chr4.nic@FAM114A1 transcript906.chr4.nic protein_coding 38867780,38878071,38891743,38905522,38905755,38908592,38914921 38867834,38878426,38891830,38905635,38905861,38908726,38915178 Gene ID= ENSG00000197712.11 TPM= 4.53 Transcript Type= NA chr4 38867816 38945739 38867816 38945739 + ENST00000358869.4@FAM114A1 ENST00000358869.4 protein_coding 38867816,38868398,38878071,38891743,38905522,38905755,38908592,38914921,38922770,38929242,38931451,38932235,38935718,38940968,38943456 38867834,38868546,38878426,38891830,38905635,38905861,38908726,38915073,38922893,38929333,38931612,38932374,38935790,38941021,38945739 Gene ID= ENSG00000197712.11 TPM= 40.75 Transcript Type= protein_coding chr4 39182404 39285810 39182404 39285810 + ENST00000399820.7@WDR19 ENST00000399820.7 protein_coding 39182404,39185726,39186539,39189656,39194544,39199478,39203642,39205154,39205563,39214601,39215841,39216096,39217134,39217983,39224884,39228210,39228486,39231797,39232162,39234766,39240277,39244248,39244470,39245369,39253146,39253906,39255848,39257486,39266063,39267995,39269976,39272980,39274808,39277020,39278131,39278539,39285487 39182563,39185817,39186604,39189781,39194659,39199593,39203722,39205266,39205736,39214671,39216013,39216210,39217240,39218105,39225033,39228357,39228690,39231956,39232272,39234875,39240334,39244388,39244552,39245452,39253292,39254030,39255960,39257554,39266140,39268091,39270100,39273061,39274958,39277143,39278207,39278663,39285810 Gene ID= ENSG00000157796.17 TPM= 11.77 Transcript Type= protein_coding chr4 39182522 39285809 39182522 39285809 + transcript914.chr4.nic@WDR19 transcript914.chr4.nic protein_coding 39182522,39186539,39189656,39194544,39199478,39203642,39205154,39205563,39214601,39215841,39216096,39217134,39217983,39224884,39228210,39228486,39231797,39232162,39234766,39240277,39244248,39244470,39245369,39253146,39253906,39255848,39257486,39266063,39267995,39269976,39272980,39274808,39277020,39278131,39278539,39285487 39182563,39186604,39189781,39194659,39199593,39203722,39205266,39205736,39214671,39216013,39216210,39217240,39218105,39225033,39228357,39228690,39231956,39232272,39234875,39240334,39244388,39244552,39245452,39253292,39254030,39255960,39257554,39266140,39268091,39270100,39273061,39274958,39277143,39278207,39278663,39285809 Gene ID= ENSG00000157796.17 TPM= 3.62 Transcript Type= NA chr4 39287456 39366393 39287456 39366393 - transcript923.chr4.nnic@RFC1 transcript923.chr4.nnic protein_coding 39366239,39351348,39345401,39342345,39327524,39326563,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456 39366393,39351476,39345476,39342467,39327756,39326640,39321374,39320669,39317022,39312931,39311549,39309032,39306701,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844 Gene ID= ENSG00000035928.15 TPM= 3.62 Transcript Type= NA chr4 39287456 39366375 39287456 39366375 - ENST00000381897.5@RFC1 ENST00000381897.5 protein_coding 39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456 39366375,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306704,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844 Gene ID= ENSG00000035928.15 TPM= 46.18 Transcript Type= protein_coding chr4 39287456 39366351 39287456 39366351 - ENST00000349703.6@RFC1 ENST00000349703.6 protein_coding 39366239,39351348,39345401,39342345,39327524,39326563,39323340,39321287,39320383,39316915,39312752,39311445,39308636,39306592,39304814,39303060,39302737,39302500,39302278,39300260,39300021,39295614,39291639,39289848,39287456 39366351,39351476,39345476,39342467,39327756,39326640,39323417,39321374,39320669,39317022,39312931,39311549,39309032,39306701,39304928,39303151,39302874,39302595,39302376,39300414,39300138,39295759,39291852,39290039,39288844 Gene ID= ENSG00000035928.15 TPM= 16.3 Transcript Type= protein_coding chr4 39454124 39458948 39454124 39458948 - ENST00000295955.13@RPL9 ENST00000295955.13 protein_coding 39458891,39458394,39458194,39457586,39456406,39454864,39454533,39454124 39458948,39458440,39458309,39457681,39456538,39454944,39454649,39454225 Gene ID= ENSG00000163682.15 TPM= 271.66 Transcript Type= protein_coding chr4 39454137 39458888 39454137 39458888 - ENST00000449470.6@RPL9 ENST00000449470.6 protein_coding 39458394,39458194,39457586,39456406,39454864,39454533,39454137 39458888,39458309,39457681,39456538,39454944,39454649,39454225 Gene ID= ENSG00000163682.15 TPM= 41.66 Transcript Type= protein_coding chr4 39458587 39479506 39458587 39479506 + ENST00000640888.1@LIAS ENST00000640888.1 protein_coding 39458587,39460790,39462196,39463525,39465046,39465285,39467518,39470019,39471236,39473100,39477063 39459162,39460962,39462289,39463605,39465202,39465342,39467646,39470164,39471306,39473211,39479506 Gene ID= ENSG00000121897.14 TPM= 8.15 Transcript Type= protein_coding chr4 39459063 39477648 39459063 39477648 + ENST00000381846.2@LIAS ENST00000381846.2 protein_coding 39459063,39460790,39462196,39463525,39465046,39465285,39470019,39471236,39473100,39477063 39459162,39460962,39462289,39463605,39465202,39465342,39470164,39471306,39473211,39477648 Gene ID= ENSG00000121897.14 TPM= 3.62 Transcript Type= protein_coding chr4 39498755 39527618 39498755 39527618 - ENST00000316423.10@UGDH ENST00000316423.10 protein_coding 39527283,39521351,39514083,39510661,39510353,39509760,39508566,39505618,39505237,39504417,39503875,39498755 39527618,39521519,39514184,39510861,39510550,39509907,39508660,39505748,39505370,39504508,39503985,39500253 Gene ID= ENSG00000109814.11 TPM= 136.13 Transcript Type= protein_coding chr4 39527709 39536067 39527709 39536067 + transcript938.chr4.nnic@UGDH-AS1 transcript938.chr4.nnic antisense_RNA 39527709,39531969,39535379 39528338,39534927,39536067 Gene ID= ENSG00000249348.1 TPM= 9.06 Transcript Type= NA chr4 39547300 39639088 39547300 39639088 - transcript939.chr4.nnic@SMIM14 transcript939.chr4.nnic protein_coding 39638739,39605071,39572415,39556428,39551258,39547300 39639088,39605180,39572463,39556570,39552158,39548942 Gene ID= ENSG00000163683.11 TPM= 77.42 Transcript Type= NA chr4 39546330 39639090 39546330 39639090 - ENST00000295958.9@SMIM14 ENST00000295958.9 protein_coding 39638739,39605071,39572415,39556428,39546330 39639090,39605180,39572463,39556570,39552158 Gene ID= ENSG00000163683.11 TPM= 35.77 Transcript Type= protein_coding chr4 39898014 39977956 39898014 39977956 - ENST00000503396.5@PDS5A ENST00000503396.5 protein_coding 39977457,39976440,39927961,39926775,39925836,39922622,39920319,39917048,39913611,39910244,39908395,39904040,39902347,39900426,39898777,39898014 39977956,39976617,39928164,39926861,39925933,39922748,39920399,39917188,39913726,39910338,39908540,39904191,39902460,39900507,39898825,39898528 Gene ID= ENSG00000121892.14 TPM= 5.43 Transcript Type= protein_coding chr4 40196907 40246967 40196907 40246967 + ENST00000381799.9@RHOH ENST00000381799.9 protein_coding 40196907,40242714,40243178 40197300,40242834,40246967 Gene ID= ENSG00000168421.12 TPM= 1.81 Transcript Type= protein_coding chr4 40423268 40630976 40423268 40630976 - transcript977.chr4.nic@RBM47 transcript977.chr4.nic protein_coding 40630779,40630463,40544422,40466577,40437771,40436441,40432651,40423268 40630976,40630621,40544506,40466699,40438924,40436647,40432862,40426143 Gene ID= ENSG00000163694.14 TPM= 18.37 Transcript Type= NA chr4 40423268 40586888 40423268 40586888 - transcript980.chr4.nnic@RBM47 transcript980.chr4.nnic protein_coding 40586544,40544422,40466577,40437771,40436441,40432651,40423268 40586888,40544506,40466699,40438924,40436647,40432862,40426143 Gene ID= ENSG00000163694.14 TPM= 12.03 Transcript Type= NA chr4 40423268 40630852 40423268 40630852 - transcript985.chr4.nic@RBM47 transcript985.chr4.nic protein_coding 40630779,40630463,40544422,40466577,40437771,40432651,40423268 40630852,40630621,40544506,40466699,40438924,40432862,40426143 Gene ID= ENSG00000163694.14 TPM= 5.47 Transcript Type= NA chr4 40423268 40515950 40423268 40515950 - transcript987.chr4.nic@RBM47 transcript987.chr4.nic protein_coding 40515867,40466577,40437771,40436441,40432651,40423268 40515950,40466699,40438924,40436647,40432862,40426143 Gene ID= ENSG00000163694.14 TPM= 5.92 Transcript Type= NA chr4 40423268 40629865 40423268 40629865 - transcript991.chr4.nic@RBM47 transcript991.chr4.nic protein_coding 40629396,40544422,40466577,40437771,40432651,40423268 40629865,40544506,40466699,40438924,40432862,40426143 Gene ID= ENSG00000163694.14 TPM= 15.88 Transcript Type= NA chr4 40424338 40629864 40424338 40629864 - ENST00000295971.11@RBM47 ENST00000295971.11 protein_coding 40629396,40544422,40466577,40437771,40436441,40432651,40424338 40629864,40544506,40466699,40438924,40436647,40432862,40426143 Gene ID= ENSG00000163694.14 TPM= 16.45 Transcript Type= protein_coding chr4 40810027 41214618 40810027 41214618 - ENST00000295974.12@APBB2 ENST00000295974.12 protein_coding 41214405,41142987,41100639,41065576,41033236,41013583,40944865,40935077,40934614,40934456,40893265,40890364,40830463,40827132,40825887,40823644,40821871,40810027 41214618,41143142,41100750,41065673,41033304,41014398,40945070,40935139,40934699,40934516,40893411,40890491,40830577,40827219,40825970,40823759,40822050,40816259 Gene ID= ENSG00000163697.16 TPM= 7.24 Transcript Type= protein_coding chr4 41256833 41268429 41256833 41268429 + ENST00000284440.8@UCHL1 ENST00000284440.8 protein_coding 41256833,41257115,41257609,41260647,41261715,41261876,41263225,41264103,41267987 41257009,41257126,41257737,41260797,41261800,41261923,41263291,41264161,41268429 Gene ID= ENSG00000154277.12 TPM= 10.41 Transcript Type= protein_coding chr4 41256908 41268428 41256908 41268428 + ENST00000381760.8@UCHL1 ENST00000381760.8 protein_coding 41256908,41257115,41260647,41261715,41261876,41263225,41264103,41267987 41257009,41257737,41260797,41261800,41261923,41263291,41264161,41268428 Gene ID= ENSG00000154277.12 TPM= 2.26 Transcript Type= retained_intron chr4 41360777 41700042 41360777 41700042 + transcript1011.chr4.nic@LIMCH1 transcript1011.chr4.nic protein_coding 41360777,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160 41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41700042 Gene ID= ENSG00000064042.17 TPM= 23.84 Transcript Type= NA chr4 41538165 41700042 41538165 41700042 + transcript1012.chr4.nic@LIMCH1 transcript1012.chr4.nic protein_coding 41538165,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676382,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160 41538350,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41700042 Gene ID= ENSG00000064042.17 TPM= 22.03 Transcript Type= NA chr4 41360786 41622099 41360786 41622099 + transcript1017.chr4.nic@LIMCH1 transcript1017.chr4.nic protein_coding 41360786,41494536,41524409,41598920,41603875,41605894,41613466,41619188 41360936,41494606,41524478,41599026,41603905,41606004,41613661,41622099 Gene ID= ENSG00000064042.17 TPM= 1.81 Transcript Type= NA chr4 41360785 41699012 41360785 41699012 + ENST00000512946.5@LIMCH1 ENST00000512946.5 protein_coding 41360785,41494536,41524409,41598920,41603875,41605894,41613466,41619188,41638932,41644500,41646123,41646485,41650393,41661420,41662821,41666561,41671554,41676379,41680006,41680955,41682333,41684397,41685710,41689527,41692282,41697160 41360936,41494606,41524478,41599026,41603905,41606004,41613661,41619440,41638967,41644626,41646280,41646893,41650608,41661510,41662984,41666666,41671594,41676462,41680098,41681059,41682460,41684518,41685830,41689635,41692384,41699012 Gene ID= ENSG00000064042.17 TPM= 4.83 Transcript Type= protein_coding chr4 41935120 41960572 41935120 41960572 + ENST00000504986.5@TMEM33 ENST00000504986.5 protein_coding 41935120,41938602,41939196,41943747,41944793,41949302,41954070 41935529,41938696,41939383,41943814,41944926,41949385,41960572 Gene ID= ENSG00000109133.12 TPM= 37.13 Transcript Type= protein_coding chr4 41990503 42099368 41990503 42099368 + transcript1025.chr4.nnic@SLC30A9 transcript1025.chr4.nnic protein_coding 41990503,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42086082,42098042 41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42086570,42099368 Gene ID= ENSG00000014824.13 TPM= 4.71 Transcript Type= NA chr4 41990503 42099368 41990503 42099368 + transcript1027.chr4.nnic@SLC30A9 transcript1027.chr4.nnic protein_coding 41990503,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212,42098042 41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078325,42099368 Gene ID= ENSG00000014824.13 TPM= 4.71 Transcript Type= NA chr4 41990503 42078908 41990503 42078908 + transcript1029.chr4.nic@SLC30A9 transcript1029.chr4.nic protein_coding 41990503,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42070526,42075657,42078212 41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42070691,42075786,42078908 Gene ID= ENSG00000014824.13 TPM= 11.05 Transcript Type= NA chr4 41990503 42087532 41990503 42087532 + transcript1034.chr4.nnic@SLC30A9 transcript1034.chr4.nnic protein_coding 41990503,42001616,42018111,42020416,42022838,42023302,42035275,42038986,42049377,42060191,42062986,42065310,42066550,42067085,42086082 41990760,42001780,42018170,42020515,42022930,42023384,42035333,42039053,42049479,42060246,42063121,42065349,42066621,42067192,42087532 Gene ID= ENSG00000014824.13 TPM= 4.26 Transcript Type= NA chr4 42408377 42657132 42408377 42657132 - transcript1039.chr4.nic@ATP8A1 transcript1039.chr4.nic protein_coding 42656825,42626995,42625614,42624536,42616033,42600478,42590811,42588260,42586349,42581621,42579813,42578260,42575622,42574619,42555968,42552505,42551198,42549013,42543917,42524763,42522160,42507016,42503450,42485496,42464893,42464690,42455525,42455297,42451981,42446583,42444578,42443565,42423617,42422807,42414627,42408377 42657132,42627109,42625713,42624634,42616078,42600518,42590884,42588329,42586476,42581732,42579978,42578387,42575699,42574707,42556040,42552610,42551280,42549062,42543986,42524847,42522299,42507154,42503514,42485668,42465076,42464800,42455599,42455419,42452059,42446644,42444634,42443672,42423705,42422899,42414718,42413013 Gene ID= ENSG00000124406.16 TPM= 3.62 Transcript Type= NA chr4 42408377 42657093 42408377 42657093 - ENST00000264449.14@ATP8A1 ENST00000264449.14 protein_coding 42656825,42626995,42625614,42624536,42616033,42600478,42594289,42588260,42586349,42581621,42579813,42578260,42575622,42574619,42555968,42552505,42551198,42549013,42543917,42524763,42522160,42507016,42503450,42485496,42464893,42464690,42455525,42455297,42451981,42446583,42444578,42443565,42423617,42422807,42414627,42408377 42657093,42627109,42625713,42624634,42616078,42600518,42594362,42588329,42586476,42581732,42579978,42578387,42575699,42574707,42556040,42552610,42551280,42549062,42543986,42524847,42522299,42507154,42503514,42485668,42465076,42464800,42455599,42455419,42452059,42446644,42444634,42443672,42423705,42422899,42414718,42413013 Gene ID= ENSG00000124406.16 TPM= 3.62 Transcript Type= protein_coding chr4 44678425 44700684 44678425 44700684 + transcript1044.chr4.nnic@GUF1 transcript1044.chr4.nnic protein_coding 44678425,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44688007,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544 44678585,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44688146,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700684 Gene ID= ENSG00000151806.13 TPM= 1.99 Transcript Type= NA chr4 44678416 44700684 44678416 44700684 + transcript1047.chr4.nnic@GUF1 transcript1047.chr4.nnic protein_coding 44678416,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544 44678787,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700684 Gene ID= ENSG00000151806.13 TPM= 3.8 Transcript Type= NA chr4 44678425 44700684 44678425 44700684 + transcript1048.chr4.nnic@GUF1 transcript1048.chr4.nnic protein_coding 44678425,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544 44678585,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700684 Gene ID= ENSG00000151806.13 TPM= 1.99 Transcript Type= NA chr4 44678440 44700684 44678440 44700684 + transcript1050.chr4.nnic@GUF1 transcript1050.chr4.nnic protein_coding 44678440,44680694,44681123,44682334,44683235,44685959,44686510,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544 44678787,44680842,44681203,44682411,44683318,44686023,44686713,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700684 Gene ID= ENSG00000151806.13 TPM= 2.9 Transcript Type= NA chr4 44678429 44700926 44678429 44700926 + ENST00000281543.5@GUF1 ENST00000281543.5 protein_coding 44678429,44680441,44680694,44681123,44682334,44683235,44685959,44686510,44688007,44689286,44689843,44690717,44691666,44694412,44695615,44697408,44698544 44678787,44680552,44680842,44681203,44682411,44683318,44686023,44686713,44688146,44689409,44689975,44690860,44691799,44694513,44695734,44697444,44700926 Gene ID= ENSG00000151806.13 TPM= 21.01 Transcript Type= protein_coding chr4 44702139 44726595 44702139 44726595 - ENST00000295448.7@GNPDA2 ENST00000295448.7 protein_coding 44726474,44722084,44718309,44717113,44710953,44707752,44702139 44726595,44722242,44718410,44717295,44711137,44707926,44703142 Gene ID= ENSG00000163281.11 TPM= 14.49 Transcript Type= protein_coding chr4 47450796 47463719 47450796 47463719 - ENST00000381571.5@COMMD8 ENST00000381571.5 protein_coding 47463586,47460144,47456577,47453059,47450796 47463719,47460299,47456729,47453214,47451665 Gene ID= ENSG00000169019.10 TPM= 24.45 Transcript Type= protein_coding chr4 47485247 47592885 47485247 47592885 + transcript1059.chr4.nic@ATP10D transcript1059.chr4.nic protein_coding 47485247,47512504,47515476,47523012,47525557,47535509,47535902,47536437,47536731,47546624,47554726,47557664,47558923,47560949,47563581,47568837,47572154,47572872,47576773,47580398,47581960,47587019,47591042 47485519,47512830,47515670,47523216,47525642,47535615,47536033,47536564,47536938,47546862,47554914,47558273,47559029,47561075,47563765,47569146,47572230,47572997,47576973,47580478,47582064,47587206,47592885 Gene ID= ENSG00000145246.13 TPM= 3.62 Transcript Type= NA chr4 47485247 47592885 47485247 47592885 + transcript1060.chr4.nnic@ATP10D transcript1060.chr4.nnic protein_coding 47485247,47512504,47523012,47525557,47535509,47535902,47536437,47536686,47546624,47554726,47557664,47558923,47560949,47563581,47568837,47572154,47572872,47576773,47580398,47581960,47587019,47591042 47485519,47512830,47523216,47525642,47535615,47536033,47536564,47536938,47546862,47554914,47558273,47559029,47561075,47563765,47569146,47572230,47572997,47576973,47580478,47582064,47587206,47592885 Gene ID= ENSG00000145246.13 TPM= 3.62 Transcript Type= NA chr4 47485247 47557445 47485247 47557445 + transcript1061.chr4.nic@ATP10D transcript1061.chr4.nic protein_coding 47485247,47512504,47515476,47523012,47525557,47535509,47535902,47536437,47536686,47546624,47554726 47485519,47512830,47515670,47523216,47525642,47535615,47536033,47536564,47536938,47546862,47557445 Gene ID= ENSG00000145246.13 TPM= 1.81 Transcript Type= NA chr4 47485247 47547680 47485247 47547680 + transcript1062.chr4.nic@ATP10D transcript1062.chr4.nic protein_coding 47485247,47512504,47515476,47523012,47525557,47535509,47535902,47536437,47536686,47546624 47485519,47512830,47515670,47523216,47525642,47535615,47536033,47536564,47536938,47547680 Gene ID= ENSG00000145246.13 TPM= 1.81 Transcript Type= NA chr4 47847240 47914616 47847240 47914616 - ENST00000381538.7@NFXL1 ENST00000381538.7 protein_coding 47914550,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847240 47914616,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336 Gene ID= ENSG00000170448.11 TPM= 5.89 Transcript Type= protein_coding chr4 47847233 47914667 47847233 47914667 - ENST00000329043.7@NFXL1 ENST00000329043.7 protein_coding 47914613,47913969,47910824,47905237,47903193,47899370,47898959,47898757,47897967,47896523,47894180,47890613,47885879,47885498,47884346,47879096,47878525,47875127,47862846,47855059,47851856,47851095,47847233 47914667,47914205,47910994,47905346,47903323,47899548,47899120,47898857,47898081,47896647,47894302,47890703,47885999,47885657,47884437,47879117,47878665,47875293,47862915,47855163,47851942,47851148,47848336 Gene ID= ENSG00000170448.11 TPM= 1.36 Transcript Type= protein_coding chr4 48135783 48269864 48135783 48269864 - ENST00000381501.7@TEC ENST00000381501.7 protein_coding 48269752,48228477,48176082,48171368,48170248,48168586,48167778,48163702,48156680,48150863,48149557,48146325,48145408,48145079,48141355,48138904,48138665,48135783 48269864,48228659,48176186,48171449,48170376,48168626,48167953,48163767,48156734,48150942,48149690,48146399,48145579,48145295,48141419,48139022,48138822,48137499 Gene ID= ENSG00000135605.12 TPM= 7.24 Transcript Type= protein_coding chr4 48341358 48426196 48341358 48426196 + transcript1077.chr4.nic@SLAIN2 transcript1077.chr4.nic protein_coding 48341358,48369849,48377896,48379690,48382568,48383647,48394576,48420125,48422011 48342128,48369997,48378060,48379848,48382927,48383784,48394653,48420443,48426196 Gene ID= ENSG00000109171.14 TPM= 13.13 Transcript Type= NA chr4 48341322 48426212 48341322 48426212 + ENST00000264313.10@SLAIN2 ENST00000264313.10 protein_coding 48341322,48369849,48377896,48379690,48382568,48383647,48420125,48422011 48342128,48369997,48378060,48379848,48382927,48383784,48420443,48426212 Gene ID= ENSG00000109171.14 TPM= 20.37 Transcript Type= protein_coding chr4 48805142 48861359 48805142 48861359 + transcript1079.chr4.nic@OCIAD1 transcript1079.chr4.nic protein_coding 48805142,48830577,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725 48805330,48830673,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861359 Gene ID= ENSG00000109180.14 TPM= 2.72 Transcript Type= NA chr4 48831065 48861248 48831065 48861248 + ENST00000264312.11@OCIAD1 ENST00000264312.11 protein_coding 48831065,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725 48831249,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861248 Gene ID= ENSG00000109180.14 TPM= 71.54 Transcript Type= protein_coding chr4 48831342 48861250 48831342 48861250 + ENST00000513391.2@OCIAD1 ENST00000513391.2 protein_coding 48831342,48832620,48833401,48842636,48848399,48849947,48851806,48857213,48860725 48831398,48832682,48833481,48842689,48848446,48850082,48851975,48857365,48861250 Gene ID= ENSG00000109180.14 TPM= 9.96 Transcript Type= protein_coding chr4 48885019 48906828 48885019 48906828 - ENST00000508632.5@OCIAD2 ENST00000508632.5 protein_coding 48906658,48904484,48899829,48897804,48894006,48892772,48885019 48906828,48904611,48899925,48897857,48894053,48892889,48885565 Gene ID= ENSG00000145247.11 TPM= 37.13 Transcript Type= protein_coding chr4 48885382 48906937 48885382 48906937 - ENST00000508069.6@OCIAD2 ENST00000508069.6 protein_coding 48906658,48904484,48897804,48894006,48892772,48885382 48906937,48904611,48897857,48894053,48892889,48885565 Gene ID= ENSG00000145247.11 TPM= 6.34 Transcript Type= processed_transcript chr4 48885388 48906788 48885388 48906788 - ENST00000273860.8@OCIAD2 ENST00000273860.8 protein_coding 48906658,48904484,48899829,48897804,48894006,48885388 48906788,48904611,48899925,48897857,48894053,48885565 Gene ID= ENSG00000145247.11 TPM= 1.81 Transcript Type= protein_coding chr4 51843063 51916837 51843063 51916837 + ENST00000334635.9@DCUN1D4 ENST00000334635.9 protein_coding 51843063,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51911070,51913290,51913529 51843267,51863507,51863709,51874385,51877854,51886638,51891851,51899378,51911174,51913392,51916837 Gene ID= ENSG00000109184.14 TPM= 32.72 Transcript Type= protein_coding chr4 51843124 51916838 51843124 51916838 + transcript1108.chr4.nic@DCUN1D4 transcript1108.chr4.nic protein_coding 51843124,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51911070,51913290,51913529 51843267,51863507,51863709,51874385,51877854,51887244,51891851,51899378,51911174,51913392,51916838 Gene ID= ENSG00000109184.14 TPM= 4.65 Transcript Type= NA chr4 51843131 51916838 51843131 51916838 + transcript1110.chr4.nic@DCUN1D4 transcript1110.chr4.nic protein_coding 51843131,51848205,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51913290,51913529 51843267,51848367,51863507,51863709,51874385,51877854,51886638,51891851,51899378,51913392,51916838 Gene ID= ENSG00000109184.14 TPM= 3.44 Transcript Type= NA chr4 51843063 51916837 51843063 51916837 + ENST00000381441.7@DCUN1D4 ENST00000381441.7 protein_coding 51843063,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51913290,51913529 51843267,51863507,51863709,51874385,51877854,51886638,51891851,51899378,51913392,51916837 Gene ID= ENSG00000109184.14 TPM= 7.06 Transcript Type= protein_coding chr4 51843579 51916835 51843579 51916835 + ENST00000451288.6@DCUN1D4 ENST00000451288.6 protein_coding 51843579,51863437,51863670,51874271,51877763,51886568,51891760,51899270,51911070,51913290,51913529 51843742,51863507,51863709,51874385,51877854,51886638,51891851,51899378,51911174,51913392,51916835 Gene ID= ENSG00000109184.14 TPM= 4.65 Transcript Type= protein_coding chr4 52020705 52038295 52020705 52038295 - transcript1125.chr4.nnic@SGCB transcript1125.chr4.nnic protein_coding 52038227,52029678,52028730,52027968,52020705 52038295,52029863,52028921,52028099,52024160 Gene ID= ENSG00000163069.12 TPM= 19.02 Transcript Type= NA chr4 52051420 52097297 52051420 52097297 + transcript1131.chr4.nic@SPATA18 transcript1131.chr4.nic protein_coding 52051420,52071917,52076779,52078735,52079744,52082387,52084916,52094527,52094880 52051791,52072156,52077040,52078893,52079919,52082510,52084999,52094572,52097297 Gene ID= ENSG00000163071.10 TPM= 3.62 Transcript Type= NA chr4 52595690 52659292 52595690 52659292 - transcript1135.chr4.nnic@USP46 transcript1135.chr4.nnic protein_coding 52659115,52631064,52627950,52626018,52610541,52604501,52601857,52598628,52595690 52659292,52631144,52628127,52626247,52610617,52604584,52602054,52598706,52597741 Gene ID= ENSG00000109189.12 TPM= 2.72 Transcript Type= NA chr4 52712404 52714137 52712404 52714137 + ENST00000411630.6@DANCR ENST00000411630.6 processed_transcript 52712404,52712824,52713494 52712527,52712959,52714137 Gene ID= ENSG00000226950.6 TPM= 122.25 Transcript Type= lincRNA chr4 52862290 52866835 52862290 52866835 + ENST00000248706.4@RASL11B ENST00000248706.4 protein_coding 52862290,52863268,52864478,52865335 52862649,52863324,52864554,52866835 Gene ID= ENSG00000128045.6 TPM= 11.77 Transcript Type= protein_coding chr4 52872625 52920871 52872625 52920871 - transcript1146.chr4.nic@SCFD2 transcript1146.chr4.nic protein_coding 52920725,52885747,52872625 52920871,52885866,52874061 Gene ID= ENSG00000184178.15 TPM= 1.81 Transcript Type= NA chr4 53143003 53366086 53143003 53366086 - transcript1150.chr4.nic@SCFD2 transcript1150.chr4.nic protein_coding 53365104,53352598,53313636,53273826,53143003 53366086,53352766,53313763,53274001,53145582 Gene ID= ENSG00000184178.15 TPM= 24.45 Transcript Type= NA chr4 53377639 53459616 53377639 53459616 + transcript1152.chr4.nic@FIP1L1 transcript1152.chr4.nic protein_coding 53377639,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459616 Gene ID= ENSG00000145216.15 TPM= 3.62 Transcript Type= NA chr4 53377639 53459616 53377639 53459616 + transcript1157.chr4.nic@FIP1L1 transcript1157.chr4.nic protein_coding 53377639,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459616 Gene ID= ENSG00000145216.15 TPM= 2.72 Transcript Type= NA chr4 53377639 53462825 53377639 53462825 + transcript1158.chr4.nic@FIP1L1 transcript1158.chr4.nic protein_coding 53377639,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53462825 Gene ID= ENSG00000145216.15 TPM= 8.15 Transcript Type= NA chr4 53377675 53459673 53377675 53459673 + transcript1161.chr4.nic@FIP1L1 transcript1161.chr4.nic protein_coding 53377675,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459673 Gene ID= ENSG00000145216.15 TPM= 1.81 Transcript Type= NA chr4 53377593 53459673 53377593 53459673 + transcript1162.chr4.nic@FIP1L1 transcript1162.chr4.nic protein_coding 53377593,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459673 Gene ID= ENSG00000145216.15 TPM= 6.34 Transcript Type= NA chr4 53377639 53462878 53377639 53462878 + transcript1166.chr4.nic@FIP1L1 transcript1166.chr4.nic protein_coding 53377639,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53462878 Gene ID= ENSG00000145216.15 TPM= 10.87 Transcript Type= NA chr4 53377593 53459673 53377593 53459673 + transcript1170.chr4.nic@FIP1L1 transcript1170.chr4.nic protein_coding 53377593,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459673 Gene ID= ENSG00000145216.15 TPM= 4.53 Transcript Type= NA chr4 53377639 53459671 53377639 53459671 + transcript1172.chr4.nnic@FIP1L1 transcript1172.chr4.nnic protein_coding 53377639,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53425872,53428027,53442653,53444048,53458653,53459302 53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53425965,53428183,53442707,53444103,53458790,53459671 Gene ID= ENSG00000145216.15 TPM= 1.81 Transcript Type= NA chr4 53377666 53418849 53377666 53418849 + transcript1180.chr4.nnic@FIP1L1 transcript1180.chr4.nnic protein_coding 53377666,53379225,53382278,53383773,53389809,53390521,53391009,53399730,53414615,53415000 53377923,53379264,53382335,53383876,53389873,53390628,53391139,53399839,53414722,53418849 Gene ID= ENSG00000145216.15 TPM= 1.81 Transcript Type= NA chr4 53377645 53459668 53377645 53459668 + ENST00000337488.10@FIP1L1 ENST00000337488.10 protein_coding 53377645,53379073,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53442653,53444048,53452920,53458653,53459302 53377923,53379117,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53442707,53444103,53453133,53458790,53459668 Gene ID= ENSG00000145216.15 TPM= 2.72 Transcript Type= protein_coding chr4 53377645 53459668 53377645 53459668 + ENST00000358575.9@FIP1L1 ENST00000358575.9 protein_coding 53377645,53379225,53382278,53383773,53389809,53390521,53391009,53391430,53399730,53414615,53425872,53428027,53440582,53442653,53444048,53452920,53458653,53459302 53377923,53379264,53382335,53383876,53389873,53390628,53391139,53391498,53399839,53414722,53425965,53428183,53440608,53442707,53444103,53453133,53458790,53459668 Gene ID= ENSG00000145216.15 TPM= 9.06 Transcript Type= protein_coding chr4 53459299 53593006 53459299 53593006 - transcript1177.chr4.nnic@LNX1 transcript1177.chr4.nnic protein_coding 53592533,53591388,53573623,53507986,53507317,53498641,53496023,53481720,53478565,53476753,53461435,53459299 53593006,53591515,53574088,53508227,53507469,53498843,53496394,53481854,53478742,53476981,53461593,53461042 Gene ID= ENSG00000072201.13 TPM= 5.43 Transcript Type= NA chr4 54009789 54064690 54009789 54064690 - ENST00000263921.7@CHIC2 ENST00000263921.7 protein_coding 54064182,54049251,54048955,54014063,54013837,54009789 54064690,54049305,54049110,54014119,54013896,54010145 Gene ID= ENSG00000109220.10 TPM= 28.07 Transcript Type= protein_coding chr4 54229097 54298247 54229097 54298247 + ENST00000257290.9@PDGFRA ENST00000257290.9 protein_coding 54229097,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54285371,54285841,54287430,54288799,54289009,54290313,54295125 54229415,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54285486,54285963,54287541,54288898,54289114,54290554,54298247 Gene ID= ENSG00000134853.11 TPM= 23.09 Transcript Type= protein_coding chr4 54233515 54298244 54233515 54298244 + transcript1191.chr4.nnic@PDGFRA transcript1191.chr4.nnic protein_coding 54233515,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54285371,54285841,54287430,54288799,54289009,54290313,54295125 54234498,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54285486,54285963,54287541,54288898,54289114,54290554,54298244 Gene ID= ENSG00000134853.11 TPM= 9.96 Transcript Type= NA chr4 54229173 54281977 54229173 54281977 + transcript1193.chr4.nic@PDGFRA transcript1193.chr4.nic protein_coding 54229173,54258757,54261095,54263667,54264919,54267289,54267552,54270633,54272394,54273537,54274531,54274841,54277388,54277896,54278362,54280316,54281581 54229415,54258817,54261412,54263927,54265049,54267460,54267741,54270748,54272520,54273730,54274625,54274973,54277492,54278006,54278515,54280482,54281977 Gene ID= ENSG00000134853.11 TPM= 3.17 Transcript Type= NA chr4 55078477 55125589 55078477 55125589 - ENST00000263923.4@KDR ENST00000263923.4 protein_coding 55125227,55121097,55118604,55115281,55114874,55114126,55113304,55110654,55110403,55107737,55106687,55105832,55104643,55102362,55101897,55098697,55098137,55097662,55096229,55095577,55094802,55092617,55089956,55089691,55089374,55088868,55087607,55082536,55081956,55078477 55125589,55121190,55118800,55115411,55115042,55114265,55113481,55110768,55110566,55107893,55106810,55105940,55104984,55102508,55102028,55098803,55098272,55097766,55096342,55095665,55094955,55092714,55090078,55089802,55089473,55088973,55087758,55082635,55082041,55080163 Gene ID= ENSG00000128052.8 TPM= 16.3 Transcript Type= protein_coding chr4 55346109 55373096 55346109 55373096 + ENST00000264228.8@SRD5A3 ENST00000264228.8 protein_coding 55346109,55359346,55364074,55367588,55369832 55346557,55359488,55364271,55367722,55373096 Gene ID= ENSG00000128039.10 TPM= 39.84 Transcript Type= protein_coding chr4 55395919 55453396 55395919 55453396 + transcript1212.chr4.nic@TMEM165 transcript1212.chr4.nic protein_coding 55395919,55411614,55417072,55417803,55424538,55452239 55396396,55411839,55417247,55417985,55424643,55453396 Gene ID= ENSG00000134851.12 TPM= 10.87 Transcript Type= NA chr4 55395957 55426172 55395957 55426172 + ENST00000381334.9@TMEM165 ENST00000381334.9 protein_coding 55395957,55411614,55417072,55417803,55424538,55425376 55396396,55411839,55417247,55417985,55424643,55426172 Gene ID= ENSG00000134851.12 TPM= 259.89 Transcript Type= protein_coding chr4 55442279 55546958 55442279 55546958 - transcript1200.chr4.nnic@CLOCK transcript1200.chr4.nnic protein_coding 55546782,55509912,55489374,55486393,55482739,55482365,55479640,55478815,55475963,55470717,55463685,55459148,55458892,55456218,55455897,55453677,55453054,55450091,55449396,55448779,55444633,55443687,55442279 55546958,55510065,55489465,55486549,55482828,55482480,55479699,55478963,55476054,55470806,55463805,55459261,55459010,55456300,55456003,55453824,55453129,55450232,55449496,55448868,55444785,55443896,55442634 Gene ID= ENSG00000134852.14 TPM= 1.81 Transcript Type= NA chr4 55853647 55905026 55853647 55905026 + transcript1217.chr4.nnic@EXOC1 transcript1217.chr4.nnic protein_coding 55853647,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343 55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905026 Gene ID= ENSG00000090989.17 TPM= 1.81 Transcript Type= NA chr4 55853648 55905008 55853648 55905008 + transcript1220.chr4.nnic@EXOC1 transcript1220.chr4.nnic protein_coding 55853648,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55872755,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343 55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55872808,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905008 Gene ID= ENSG00000090989.17 TPM= 1.81 Transcript Type= NA chr4 55853648 55905085 55853648 55905085 + transcript1223.chr4.nic@EXOC1 transcript1223.chr4.nic protein_coding 55853648,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343 55853953,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905085 Gene ID= ENSG00000090989.17 TPM= 15.39 Transcript Type= NA chr4 55853675 55905034 55853675 55905034 + ENST00000346134.11@EXOC1 ENST00000346134.11 protein_coding 55853675,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55888888,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343 55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55888932,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905034 Gene ID= ENSG00000090989.17 TPM= 9.96 Transcript Type= protein_coding chr4 55853739 55905034 55853739 55905034 + ENST00000349598.6@EXOC1 ENST00000349598.6 protein_coding 55853739,55858314,55860411,55864227,55868336,55870678,55871101,55871849,55877917,55883823,55890223,55891315,55892635,55893552,55896717,55899685,55902344,55904343 55853797,55858447,55860541,55864386,55868523,55870905,55871233,55871958,55878066,55883928,55890386,55891422,55892711,55893780,55896900,55899884,55902538,55905034 Gene ID= ENSG00000090989.17 TPM= 1.81 Transcript Type= protein_coding chr4 55948819 56033095 55948819 56033095 + transcript1230.chr4.nnic@CEP135 transcript1230.chr4.nnic protein_coding 55948819,55952086,55953085,55954216,55957223,55959682,55964274,55965644,55969063,55971270,55980143,55981227,55985281,55991934,55999302,56008327,56009735,56011412,56011800,56017648,56019353,56020676,56024501,56031360 55949059,55952243,55953275,55954383,55957364,55959766,55964402,55965859,55969128,55971408,55980295,55981379,55985358,55992085,55999645,56008382,56009903,56011522,56011985,56017857,56019555,56020780,56024614,56033095 Gene ID= ENSG00000174799.10 TPM= 1.81 Transcript Type= NA chr4 56338296 56387490 56338296 56387490 - transcript1234.chr4.nic@AASDH transcript1234.chr4.nic protein_coding 56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56343562,56342835,56338296 56387490,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56343684,56342966,56338791 Gene ID= ENSG00000157426.13 TPM= 2.26 Transcript Type= NA chr4 56338290 56387500 56338290 56387500 - ENST00000205214.10@AASDH ENST00000205214.10 protein_coding 56387362,56384070,56382477,56378148,56371451,56355182,56354705,56354039,56353404,56351342,56349263,56345127,56343562,56342835,56338290 56387500,56384341,56382597,56378464,56371643,56355423,56354811,56354211,56353596,56351457,56350058,56345290,56343684,56342966,56338791 Gene ID= ENSG00000157426.13 TPM= 2.26 Transcript Type= protein_coding chr4 56393363 56435628 56393363 56435628 - transcript1241.chr4.nic@PPAT transcript1241.chr4.nic protein_coding 56435350,56407650,56406495,56403289,56403040,56402109,56401330,56400784,56399179,56396619,56393363 56435628,56407716,56406618,56403401,56403185,56402181,56401481,56400911,56399400,56396739,56395548 Gene ID= ENSG00000128059.8 TPM= 3.17 Transcript Type= NA chr4 56393362 56435615 56393362 56435615 - ENST00000264220.6@PPAT ENST00000264220.6 protein_coding 56435350,56407650,56406495,56403289,56403040,56402109,56401330,56400784,56399179,56396619,56393362 56435615,56407716,56406701,56403401,56403185,56402181,56401481,56400911,56399400,56396739,56395548 Gene ID= ENSG00000128059.8 TPM= 35.77 Transcript Type= protein_coding chr4 56435741 56461361 56435741 56461361 + ENST00000514888.5@PAICS ENST00000514888.5 protein_coding 56435741,56436262,56441663,56446695,56448418,56448710,56450619,56451872,56453603,56459372 56435928,56436328,56441860,56446873,56448597,56448823,56450702,56452052,56453761,56461361 Gene ID= ENSG00000128050.8 TPM= 45.28 Transcript Type= protein_coding chr4 56436420 56461361 56436420 56461361 + transcript1248.chr4.nnic@PAICS transcript1248.chr4.nnic protein_coding 56436420,56441663,56446695,56448418,56448710,56450619,56451872,56453603,56459372 56436561,56441860,56446873,56448597,56448823,56450702,56452052,56453761,56461361 Gene ID= ENSG00000128050.8 TPM= 7.24 Transcript Type= NA chr4 56466915 56503107 56466915 56503107 + ENST00000342756.9@SRP72 ENST00000342756.9 protein_coding 56466915,56469653,56471720,56474054,56474280,56476671,56478379,56478592,56483139,56484736,56486325,56487949,56489388,56490333,56490568,56491431,56495357,56500536,56501684 56467744,56469773,56471843,56474197,56474391,56476702,56478503,56478649,56483270,56484864,56486397,56488013,56489483,56490436,56490645,56491568,56495394,56500695,56503107 Gene ID= ENSG00000174780.15 TPM= 57.05 Transcript Type= protein_coding chr4 56647988 56681706 56647988 56681706 - ENST00000420433.5@HOPX ENST00000420433.5 protein_coding 56681255,56657775,56655857,56647988 56681706,56657899,56656012,56648797 Gene ID= ENSG00000171476.21 TPM= 1.51 Transcript Type= protein_coding chr4 56647988 56681899 56647988 56681899 - ENST00000337881.11@HOPX ENST00000337881.11 protein_coding 56681255,56655857,56647988 56681899,56656012,56648797 Gene ID= ENSG00000171476.21 TPM= 7.85 Transcript Type= protein_coding chr4 56647998 56656525 56647998 56656525 - ENST00000556614.6@HOPX ENST00000556614.6 protein_coding 56656344,56655857,56647998 56656525,56656012,56648797 Gene ID= ENSG00000171476.21 TPM= 8.76 Transcript Type= protein_coding chr4 56907909 56935844 56907909 56935844 + ENST00000309042.11@REST ENST00000309042.11 protein_coding 56907909,56910630,56919787,56929841 56908213,56911536,56919870,56935844 Gene ID= ENSG00000084093.16 TPM= 6.34 Transcript Type= protein_coding chr4 56908913 56935836 56908913 56935836 + ENST00000619101.4@REST ENST00000619101.4 protein_coding 56908913,56910630,56919787,56929841 56909039,56911536,56919870,56935836 Gene ID= ENSG00000084093.16 TPM= 3.62 Transcript Type= protein_coding chr4 56962866 56977624 56962866 56977624 - transcript1268.chr4.nnic@NOA1 transcript1268.chr4.nnic protein_coding 56976442,56973858,56973148,56968384,56964406,56962866 56977624,56974022,56973353,56968515,56964526,56963661 Gene ID= ENSG00000084092.6 TPM= 4.53 Transcript Type= NA chr4 56977720 57031161 56977720 57031161 + transcript1269.chr4.nic@POLR2B transcript1269.chr4.nic protein_coding 56977720,56978640,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899 56977791,56979004,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031161 Gene ID= ENSG00000047315.15 TPM= 5.59 Transcript Type= NA chr4 56977742 57031158 56977742 57031158 + ENST00000381227.5@POLR2B ENST00000381227.5 protein_coding 56977742,56978640,56986354,56990748,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899 56977808,56979004,56986426,56990898,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158 Gene ID= ENSG00000047315.15 TPM= 98.86 Transcript Type= protein_coding chr4 56978864 57031158 56978864 57031158 + ENST00000431623.6@POLR2B ENST00000431623.6 protein_coding 56978864,56986354,56994404,56994647,56995251,56999617,57005246,57005600,57006816,57010361,57010748,57010989,57015502,57017043,57017560,57020899,57022152,57023330,57023662,57024005,57024886,57025377,57030204,57030899 56979004,56986426,56994516,56994866,56995409,56999781,57005442,57005719,57007002,57010504,57010887,57011100,57015656,57017241,57017728,57020995,57022246,57023580,57023751,57024112,57024999,57025537,57030399,57031158 Gene ID= ENSG00000047315.15 TPM= 3.32 Transcript Type= protein_coding chr4 57030773 57110385 57030773 57110385 - ENST00000295666.6@IGFBP7 ENST00000295666.6 protein_coding 57109877,57040824,57033195,57032426,57030773 57110385,57040933,57033311,57032552,57031336 Gene ID= ENSG00000163453.11 TPM= 801.71 Transcript Type= protein_coding chr4 67468748 67545606 67468748 67545606 - ENST00000273853.10@CENPC ENST00000273853.10 protein_coding 67545338,67544149,67540980,67539840,67530815,67519217,67518156,67514074,67512402,67508814,67506788,67505205,67495159,67493884,67492869,67492180,67489967,67474888,67468748 67545606,67544195,67541050,67539934,67530914,67519502,67518368,67514687,67512569,67509105,67506934,67505284,67495212,67493988,67492997,67492275,67490121,67474978,67472675 Gene ID= ENSG00000145241.10 TPM= 16.3 Transcript Type= protein_coding chr4 67612652 67701179 67612652 67701179 - ENST00000322244.9@UBA6 ENST00000322244.9 protein_coding 67701049,67696645,67682119,67681563,67678439,67677611,67673697,67670470,67668551,67665189,67663885,67663139,67662189,67649068,67646724,67645938,67644698,67641151,67638943,67635453,67634429,67634242,67633345,67631857,67631708,67630466,67629071,67626360,67624994,67624126,67623135,67622831,67612652 67701179,67696707,67682213,67681591,67678533,67677722,67673777,67670592,67668674,67665292,67663947,67663215,67662255,67649211,67646791,67646016,67644778,67641228,67639124,67635558,67634518,67634322,67633473,67631908,67631771,67630535,67629142,67626477,67625187,67624253,67623222,67622925,67619132 Gene ID= ENSG00000033178.12 TPM= 25.36 Transcript Type= protein_coding chr4 67701363 67722498 67701363 67722498 + transcript1301.chr4.nnic@UBA6-AS1 transcript1301.chr4.nnic antisense_RNA 67701363,67720422,67721477 67701484,67721051,67722498 Gene ID= ENSG00000248049.6 TPM= 3.62 Transcript Type= NA chr4 67701333 67722502 67701333 67722502 + ENST00000506606.1@UBA6-AS1 ENST00000506606.1 antisense_RNA 67701333,67720422 67701484,67722502 Gene ID= ENSG00000248049.6 TPM= 5.43 Transcript Type= antisense_RNA chr4 68310387 68350089 68310387 68350089 - ENST00000344157.8@YTHDC1 ENST00000344157.8 protein_coding 68349726,68338283,68337572,68337027,68333308,68332794,68332103,68330202,68330002,68324139,68322749,68320123,68318826,68318690,68318519,68316314,68310387 68350089,68338384,68337900,68337450,68333397,68332847,68332197,68330310,68330119,68324223,68322915,68320205,68318862,68318729,68318581,68316448,68314323 Gene ID= ENSG00000083896.12 TPM= 13.58 Transcript Type= protein_coding chr4 68313321 68350089 68313321 68350089 - ENST00000355665.7@YTHDC1 ENST00000355665.7 protein_coding 68349726,68338283,68337572,68337027,68333308,68332103,68330202,68330002,68324139,68322749,68320123,68318826,68318690,68318519,68316314,68313321 68350089,68338384,68337900,68337450,68333397,68332197,68330310,68330119,68324223,68322915,68320205,68318862,68318729,68318581,68316448,68314323 Gene ID= ENSG00000083896.12 TPM= 6.34 Transcript Type= protein_coding chr4 69841212 69860152 69841212 69860152 - ENST00000226444.3@SULT1E1 ENST00000226444.3 protein_coding 69860049,69857500,69855301,69854217,69849437,69847698,69844161,69841212 69860152,69857653,69855426,69854314,69849563,69847792,69844341,69842106 Gene ID= ENSG00000109193.11 TPM= 7.24 Transcript Type= protein_coding chr4 70704680 70808618 70704680 70808618 + transcript1312.chr4.nic@RUFY3 transcript1312.chr4.nic protein_coding 70704680,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516 70705294,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70804416,70808618 Gene ID= ENSG00000018189.12 TPM= 10.41 Transcript Type= NA chr4 70734392 70807231 70734392 70807231 + transcript1314.chr4.nic@RUFY3 transcript1314.chr4.nic protein_coding 70734392,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495,70793785,70794795,70800141,70802956,70804348,70806516 70734593,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70789592,70793904,70794894,70800205,70802983,70804416,70807231 Gene ID= ENSG00000018189.12 TPM= 2.26 Transcript Type= NA chr4 70721924 70791673 70721924 70791673 + transcript1324.chr4.nic@RUFY3 transcript1324.chr4.nic protein_coding 70721924,70762519,70763552,70764475,70768538,70773511,70775168,70778369,70783091,70784796,70788806,70789495 70722751,70762692,70763669,70764576,70768661,70773572,70775233,70778438,70783183,70784879,70788973,70791673 Gene ID= ENSG00000018189.12 TPM= 10.87 Transcript Type= NA chr4 70819527 70839981 70819527 70839981 - transcript1331.chr4.nnic@GRSF1 transcript1331.chr4.nnic protein_coding 70839471,70836158,70833118,70832307,70831539,70827852,70826124,70825296,70824294,70819527 70839981,70836314,70833273,70832450,70831634,70828036,70826245,70825431,70824368,70820861 Gene ID= ENSG00000132463.13 TPM= 7.24 Transcript Type= NA chr4 70819527 70839890 70819527 70839890 - transcript1340.chr4.nnic@GRSF1 transcript1340.chr4.nnic protein_coding 70839471,70836158,70833118,70832307,70831539,70827852,70826124,70825296,70819527 70839890,70836314,70833273,70832450,70831674,70828036,70826245,70825431,70820861 Gene ID= ENSG00000132463.13 TPM= 6.34 Transcript Type= NA chr4 70902336 70988168 70902336 70988168 + ENST00000309395.6@MOB1B ENST00000309395.6 protein_coding 70902336,70958874,70969931,70975153,70979128,70981980 70902550,70959040,70970024,70975286,70979291,70988168 Gene ID= ENSG00000173542.8 TPM= 1.81 Transcript Type= protein_coding chr4 70993439 71030914 70993439 71030914 + ENST00000286648.9@DCK ENST00000286648.9 protein_coding 70993439,70998067,71022367,71023559,71025816,71026665,71029352 70993926,70998182,71022560,71023706,71025931,71026755,71030914 Gene ID= ENSG00000156136.9 TPM= 52.97 Transcript Type= protein_coding chr4 70993563 71030914 70993563 71030914 + ENST00000503359.5@DCK ENST00000503359.5 protein_coding 70993563,70998067,71022367,71023559,71025816,71026665,71029352 70994017,70998182,71022560,71023706,71025931,71026755,71030914 Gene ID= ENSG00000156136.9 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr4 73054704 73069755 73054704 73069755 - transcript1348.chr4.nnic@COX18 transcript1348.chr4.nnic protein_coding 73069317,73068029,73065250,73064778,73061813,73057970,73054704 73069755,73068129,73065413,73064899,73061920,73058287,73057166 Gene ID= ENSG00000163626.16 TPM= 2.72 Transcript Type= NA chr4 73056087 73069755 73056087 73069755 - transcript1350.chr4.nnic@COX18 transcript1350.chr4.nnic protein_coding 73069317,73068029,73065250,73064778,73061813,73057997,73056087 73069755,73068129,73065413,73064899,73061920,73058287,73057159 Gene ID= ENSG00000163626.16 TPM= 2.26 Transcript Type= NA chr4 73075686 73258798 73075686 73258798 - ENST00000330838.10@ANKRD17 ENST00000330838.10 protein_coding 73258276,73177380,73161192,73156019,73155631,73153880,73151430,73148813,73147241,73146764,73144745,73142640,73142242,73141741,73135117,73125201,73124913,73121617,73120881,73120162,73118688,73115821,73113792,73102376,73098073,73097117,73094079,73090667,73085249,73078642,73077355,73076940,73075686 73258798,73177533,73161348,73156166,73155778,73154113,73151524,73149050,73147432,73146873,73144832,73142767,73142385,73141843,73135265,73125312,73125058,73121759,73121094,73120337,73118850,73115916,73113908,73102547,73098520,73097272,73094228,73092300,73085446,73078890,73077533,73077104,73076290 Gene ID= ENSG00000132466.18 TPM= 7.24 Transcript Type= protein_coding chr4 74158118 74162253 74158118 74162253 + ENST00000461101.1@MTHFD2L ENST00000461101.1 protein_coding 74158118,74160055 74158281,74162253 Gene ID= ENSG00000163738.18 TPM= 22.64 Transcript Type= processed_transcript chr4 74933117 75050113 74933117 75050113 + transcript1367.chr4.nnic@PARM1 transcript1367.chr4.nnic protein_coding 74933117,74940394,75012425,75033883,75046163 74933370,74940498,75013150,75033961,75050113 Gene ID= ENSG00000169116.11 TPM= 3.17 Transcript Type= NA chr4 74933116 75050113 74933116 75050113 + ENST00000307428.7@PARM1 ENST00000307428.7 protein_coding 74933116,75012425,75033883,75046163 74933370,75013150,75033961,75050113 Gene ID= ENSG00000169116.11 TPM= 98.25 Transcript Type= protein_coding chr4 75479037 75514685 75479037 75514685 - ENST00000324439.9@RCHY1 ENST00000324439.9 protein_coding 75514197,75509177,75508820,75494101,75491889,75491724,75491611,75490581,75479037 75514685,75509296,75508935,75494179,75491933,75491782,75491637,75490701,75482666 Gene ID= ENSG00000163743.13 TPM= 33.51 Transcript Type= protein_coding chr4 75514473 75530026 75514473 75530026 + ENST00000311638.7@THAP6 ENST00000311638.7 protein_coding 75514473,75515433,75516772,75521736,75526960 75514520,75515532,75516979,75521861,75530026 Gene ID= ENSG00000174796.12 TPM= 11.77 Transcript Type= protein_coding chr4 75642782 75673969 75642782 75673969 - ENST00000359707.8@G3BP2 ENST00000359707.8 protein_coding 75673208,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75642782 75673969,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702 Gene ID= ENSG00000138757.14 TPM= 18.11 Transcript Type= protein_coding chr4 75642782 75673147 75642782 75673147 - transcript1396.chr4.nic@G3BP2 transcript1396.chr4.nic protein_coding 75673019,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75642782 75673147,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702 Gene ID= ENSG00000138757.14 TPM= 13.28 Transcript Type= NA chr4 75642782 75724438 75642782 75724438 - transcript1398.chr4.nic@G3BP2 transcript1398.chr4.nic protein_coding 75724276,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75642782 75724438,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702 Gene ID= ENSG00000138757.14 TPM= 13.28 Transcript Type= NA chr4 75642782 75673114 75642782 75673114 - ENST00000395719.7@G3BP2 ENST00000395719.7 protein_coding 75673019,75661931,75658843,75657557,75656924,75655768,75655066,75653983,75648639,75647029,75646338,75642782 75673114,75662049,75658924,75657730,75657014,75655870,75655246,75654081,75648741,75647157,75646456,75645702 Gene ID= ENSG00000138757.14 TPM= 2.72 Transcript Type= protein_coding chr4 75644389 75673401 75644389 75673401 - ENST00000357854.7@G3BP2 ENST00000357854.7 protein_coding 75673208,75661931,75658843,75657557,75656924,75655768,75655066,75648639,75647029,75646338,75644389 75673401,75662049,75658924,75657730,75657014,75655870,75655246,75648741,75647157,75646456,75645702 Gene ID= ENSG00000138757.14 TPM= 15.39 Transcript Type= protein_coding chr4 75724593 75814213 75724593 75814213 + ENST00000514213.6@USO1 ENST00000514213.6 protein_coding 75724593,75752373,75752540,75757497,75770439,75770822,75771082,75774676,75782680,75787062,75790150,75790643,75793690,75799622,75800351,75800618,75801079,75804134,75805140,75806486,75808953,75810432,75812160,75813206 75724885,75752459,75752604,75757573,75770539,75770924,75771137,75774796,75782858,75787202,75790238,75790797,75793901,75799732,75800469,75800799,75801200,75804272,75805303,75806572,75809051,75810539,75812375,75814213 Gene ID= ENSG00000138768.14 TPM= 110.48 Transcript Type= protein_coding chr4 75913657 75941051 75913657 75941051 - ENST00000286733.8@NAAA ENST00000286733.8 protein_coding 75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75914868,75913657 75941051,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914985,75914338 Gene ID= ENSG00000138744.14 TPM= 15.39 Transcript Type= protein_coding chr4 75913659 75941038 75913659 75941038 - transcript1407.chr4.nnic@NAAA transcript1407.chr4.nnic protein_coding 75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75913659 75941038,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75914338 Gene ID= ENSG00000138744.14 TPM= 2.72 Transcript Type= NA chr4 75916443 75941038 75916443 75941038 - transcript1408.chr4.nic@NAAA transcript1408.chr4.nic protein_coding 75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75916443 75941038,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75916549 Gene ID= ENSG00000138744.14 TPM= 1.81 Transcript Type= NA chr4 75916570 75940981 75916570 75940981 - transcript1409.chr4.nnic@NAAA transcript1409.chr4.nnic protein_coding 75940744,75940001,75936109,75931214,75925735,75920951,75920738,75919909,75918761,75916570 75940981,75940165,75936235,75931304,75925811,75921123,75920800,75919975,75918789,75917114 Gene ID= ENSG00000138744.14 TPM= 2.72 Transcript Type= NA chr4 75934891 75940983 75934891 75940983 - ENST00000507187.2@NAAA ENST00000507187.2 protein_coding 75940744,75940001,75934891 75940983,75940165,75936235 Gene ID= ENSG00000138744.14 TPM= 2.72 Transcript Type= protein_coding chr4 75949916 75990960 75949916 75990960 - ENST00000356260.9@SDAD1 ENST00000356260.9 protein_coding 75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949916 75990960,75982037,75981470,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797 Gene ID= ENSG00000198301.11 TPM= 16.3 Transcript Type= protein_coding chr4 75949906 75990938 75949906 75990938 - ENST00000395710.5@SDAD1 ENST00000395710.5 protein_coding 75990752,75981933,75981372,75977646,75975924,75975744,75974076,75973317,75971357,75970309,75969296,75967277,75965764,75964135,75961211,75961028,75960066,75957847,75957518,75957325,75955975,75949906 75990938,75982037,75981545,75977756,75975995,75975844,75974133,75973391,75971458,75970378,75969399,75967334,75965822,75964211,75961308,75961104,75960192,75957941,75957708,75957409,75956136,75950797 Gene ID= ENSG00000198301.11 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr4 76021117 76023497 76021117 76023497 - ENST00000306602.2@CXCL10 ENST00000306602.2 protein_coding 76023371,76022691,76022366,76021117 76023497,76022817,76022455,76021948 Gene ID= ENSG00000169245.5 TPM= 2.72 Transcript Type= protein_coding chr4 76114661 76148155 76114661 76148155 - transcript1421.chr4.nnic@NUP54 transcript1421.chr4.nnic protein_coding 76145192,76144390,76144149,76136186,76134175,76132523,76131230,76130656,76124649,76118075,76117664,76114661 76148155,76144472,76144292,76136412,76134362,76132719,76131284,76130749,76124756,76118194,76117774,76115494 Gene ID= ENSG00000138750.14 TPM= 3.62 Transcript Type= NA chr4 76114664 76148515 76114664 76148515 - ENST00000264883.7@NUP54 ENST00000264883.7 protein_coding 76148308,76144390,76144149,76136186,76134175,76132523,76131230,76130656,76124649,76118075,76117664,76114664 76148515,76144473,76144292,76136412,76134362,76132719,76131284,76130749,76124756,76118194,76117774,76115494 Gene ID= ENSG00000138750.14 TPM= 25.36 Transcript Type= protein_coding chr4 76114661 76148428 76114661 76148428 - transcript1424.chr4.nic@NUP54 transcript1424.chr4.nic protein_coding 76148308,76144390,76144149,76136186,76134175,76130656,76124649,76118075,76117664,76114661 76148428,76144473,76144292,76136412,76134362,76132719,76124756,76118194,76117774,76115494 Gene ID= ENSG00000138750.14 TPM= 1.81 Transcript Type= NA chr4 76251723 76283752 76251723 76283752 + transcript1429.chr4.nic@FAM47E transcript1429.chr4.nic protein_coding 76251723,76256178,76263704,76268660,76271568,76278069,76280264,76283381 76251820,76256523,76263843,76268813,76271768,76278224,76280341,76283752 Gene ID= ENSG00000189157.13 TPM= 1.81 Transcript Type= NA chr4 76689381 76779789 76689381 76779789 + transcript1436.chr4.nic@SHROOM3 transcript1436.chr4.nic protein_coding 76689381,76710156,76730804,76738761,76749017,76754311,76756449,76759545,76770626,76778809 76689702,76710287,76730935,76741926,76749090,76755192,76756937,76759695,76770898,76779789 Gene ID= ENSG00000138771.14 TPM= 4.53 Transcript Type= NA chr4 76949703 77038614 76949703 77038614 + ENST00000264893.10@SEPT11 ENST00000264893.10 protein_coding 76949703,76996425,77005601,77011735,77014856,77019165,77020502,77028629,77030783,77034497 76949930,76996539,77005796,77011921,77015017,77019261,77020670,77028761,77030970,77038614 Gene ID= ENSG00000138758.11 TPM= 14.49 Transcript Type= protein_coding chr4 77047158 77076005 77047158 77076005 - ENST00000237654.8@CCNI ENST00000237654.8 protein_coding 77075472,77066249,77058507,77056249,77055962,77055150,77047158 77076005,77066405,77058635,77056323,77056102,77055380,77048662 Gene ID= ENSG00000118816.9 TPM= 257.17 Transcript Type= protein_coding chr4 77862520 77952790 77862520 77952790 + ENST00000315567.12@MRPL1 ENST00000315567.12 protein_coding 77862520,77871744,77883242,77885256,77887220,77894139,77909266,77949797,77952489 77862879,77871855,77883500,77885339,77887291,77894250,77909372,77949878,77952790 Gene ID= ENSG00000169288.17 TPM= 17.21 Transcript Type= protein_coding chr4 78646184 78682663 78646184 78682663 + ENST00000503539.5@LINC01094 ENST00000503539.5 lincRNA 78646184,78649601,78662918,78680761 78646263,78649709,78663011,78682663 Gene ID= ENSG00000251442.5 TPM= 1.81 Transcript Type= lincRNA chr4 78776362 78867171 78776362 78867171 + transcript1466.chr4.nic@BMP2K transcript1466.chr4.nic protein_coding 78776362,78826037,78833582,78842385,78844928,78847188,78850924,78859584,78861389,78865557 78776721,78826155,78833687,78842527,78845049,78847269,78851056,78859687,78861468,78867171 Gene ID= ENSG00000138756.17 TPM= 2.72 Transcript Type= NA chr4 78776378 78912185 78776378 78912185 + ENST00000335016.9@BMP2K ENST00000335016.9 protein_coding 78776378,78826037,78833582,78842385,78844928,78847188,78850924,78859584,78861389,78865557,78870783,78871850,78872614,78878734,78887174,78910610 78776721,78826155,78833687,78842527,78845049,78847269,78851056,78859687,78861468,78865720,78871060,78871948,78872798,78878891,78887284,78912185 Gene ID= ENSG00000138756.17 TPM= 1.81 Transcript Type= protein_coding chr4 78911878 78939438 78911878 78939438 - ENST00000512733.5@PAQR3 ENST00000512733.5 protein_coding 78939040,78935121,78930170,78926521,78923857,78911878 78939438,78935283,78930325,78926718,78923947,78920681 Gene ID= ENSG00000163291.14 TPM= 2.72 Transcript Type= protein_coding chr4 79904210 80073243 79904210 80073243 - transcript1474.chr4.nic@ANTXR2 transcript1474.chr4.nic protein_coding 80072409,80071583,80069436,80055932,80055360,80055150,80054272,80035972,80033472,80031623,80018898,80008521,79984819,79983878,79978007,79977621,79907405,79904210 80073243,80071654,80069507,80056013,80055467,80055218,80054352,80036032,80033570,80031692,80018976,80008616,79984863,79983970,79978174,79977701,79907467,79906172 Gene ID= ENSG00000163297.16 TPM= 3.62 Transcript Type= NA chr4 79904208 80073232 79904208 80073232 - transcript1477.chr4.nnic@ANTXR2 transcript1477.chr4.nnic protein_coding 80072709,80071583,80069436,80055932,80055360,80055150,80054272,80035972,80033472,80031623,80018898,80008521,79984819,79983878,79978007,79977621,79904208 80073232,80071654,80069507,80056013,80055467,80055218,80054352,80036032,80033570,80031692,80018976,80008616,79984863,79983970,79978174,79977701,79907467 Gene ID= ENSG00000163297.16 TPM= 7.24 Transcript Type= NA chr4 82353331 82373999 82353331 82373999 - transcript1489.chr4.nic@HNRNPD transcript1489.chr4.nic protein_coding 82373446,82359471,82358659,82357313,82356796,82355304,82353331 82373999,82359639,82358820,82357444,82356895,82355401,82354154 Gene ID= ENSG00000138668.18 TPM= 18.34 Transcript Type= NA chr4 82352498 82373956 82352498 82373956 - ENST00000313899.11@HNRNPD ENST00000313899.11 protein_coding 82373446,82371528,82359471,82358659,82357313,82356796,82356537,82355304,82352498 82373956,82371584,82359639,82358820,82357444,82356895,82356683,82355401,82354154 Gene ID= ENSG00000138668.18 TPM= 59.09 Transcript Type= protein_coding chr4 82353829 82373986 82353829 82373986 - ENST00000353341.8@HNRNPD ENST00000353341.8 protein_coding 82373446,82371528,82359471,82358659,82357313,82356796,82355304,82353829 82373986,82371584,82359639,82358820,82357444,82356895,82355401,82354154 Gene ID= ENSG00000138668.18 TPM= 59.99 Transcript Type= protein_coding chr4 82353834 82373983 82353834 82373983 - ENST00000352301.8@HNRNPD ENST00000352301.8 protein_coding 82373446,82359471,82358659,82357313,82356796,82356537,82355304,82353834 82373983,82359639,82358820,82357444,82356895,82356683,82355401,82354154 Gene ID= ENSG00000138668.18 TPM= 13.81 Transcript Type= protein_coding chr4 82424625 82429397 82424625 82429397 - ENST00000507721.5@HNRNPDL ENST00000507721.5 protein_coding 82429248,82428278,82428018,82427433,82427190,82426463,82424625 82429397,82428446,82428179,82427564,82427304,82426633,82426129 Gene ID= ENSG00000152795.17 TPM= 28.98 Transcript Type= protein_coding chr4 82424629 82430401 82424629 82430401 - ENST00000502762.4@HNRNPDL ENST00000502762.4 protein_coding 82429248,82428278,82428018,82427433,82427190,82426463,82426037,82425563,82424629 82430401,82428446,82428179,82427564,82427304,82426633,82426129,82425667,82424883 Gene ID= ENSG00000152795.17 TPM= 16.3 Transcript Type= nonsense_mediated_decay chr4 82424629 82429441 82424629 82429441 - ENST00000602300.5@HNRNPDL ENST00000602300.5 protein_coding 82429248,82428278,82428018,82427433,82427190,82426463,82426037,82424629 82429441,82428446,82428179,82427564,82427304,82426633,82426129,82424883 Gene ID= ENSG00000152795.17 TPM= 82.4 Transcript Type= protein_coding chr4 82430562 82461091 82430562 82461091 + ENST00000273920.7@ENOPH1 ENST00000273920.7 protein_coding 82430562,82447920,82451043,82454722,82456915,82459981 82430913,82448021,82451245,82454854,82457038,82461091 Gene ID= ENSG00000145293.15 TPM= 78.78 Transcript Type= protein_coding chr4 82483170 82562357 82483170 82562357 - ENST00000515780.6@TMEM150C ENST00000515780.6 protein_coding 82562163,82504578,82503059,82502895,82502727,82496068,82490061,82483170 82562357,82504667,82503112,82502927,82502794,82496195,82490238,82485719 Gene ID= ENSG00000249242.7 TPM= 60.67 Transcript Type= protein_coding chr4 82629539 82798857 82629539 82798857 - ENST00000319540.8@SCD5 ENST00000319540.8 protein_coding 82798306,82705283,82680707,82636591,82629539 82798857,82705413,82680912,82636823,82631517 Gene ID= ENSG00000145284.11 TPM= 412.02 Transcript Type= protein_coding chr4 82818662 82891246 82818662 82891246 - transcript1533.chr4.nic@SEC31A transcript1533.chr4.nic protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818662 82891246,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 16.18 Transcript Type= NA chr4 82818662 82891246 82818662 82891246 - transcript1535.chr4.nnic@SEC31A transcript1535.chr4.nnic protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842185,82830937,82829000,82827369,82824555,82821037,82818662 82891246,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 8.78 Transcript Type= NA chr4 82818662 82891246 82818662 82891246 - transcript1537.chr4.nic@SEC31A transcript1537.chr4.nic protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818662 82891246,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 4.41 Transcript Type= NA chr4 82818512 82891246 82818512 82891246 - transcript1540.chr4.nic@SEC31A transcript1540.chr4.nic protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818512 82891246,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 15.28 Transcript Type= NA chr4 82818662 82891246 82818662 82891246 - transcript1541.chr4.nnic@SEC31A transcript1541.chr4.nnic protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842185,82830937,82829000,82827369,82824555,82821037,82818662 82891246,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82830975,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 6.97 Transcript Type= NA chr4 82818661 82891136 82818661 82891136 - ENST00000348405.8@SEC31A ENST00000348405.8 protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818661 82891136,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 8.52 Transcript Type= protein_coding chr4 82818662 82891266 82818662 82891266 - ENST00000448323.5@SEC31A ENST00000448323.5 protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82842140,82829000,82827369,82824555,82821037,82818662 82891266,82881937,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82842481,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 9.43 Transcript Type= protein_coding chr4 82818662 82891214 82818662 82891214 - ENST00000509142.5@SEC31A ENST00000509142.5 protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82862534,82861631,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818662 82891214,82881937,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82862572,82861708,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 1.88 Transcript Type= protein_coding chr4 82818661 82891153 82818661 82891153 - ENST00000513858.5@SEC31A ENST00000513858.5 protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863318,82857689,82856952,82854903,82853570,82851431,82848804,82844386,82829000,82827369,82824555,82821037,82818661 82891153,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392,82857764,82857130,82855029,82853715,82851604,82848977,82844509,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 7.32 Transcript Type= protein_coding chr4 82818661 82844460 82818661 82844460 - ENST00000503937.5@SEC31A ENST00000503937.5 protein_coding 82844386,82842140,82830937,82829000,82827369,82824555,82821037,82818661 82844460,82842481,82830975,82829058,82827632,82824674,82821108,82819253 Gene ID= ENSG00000138674.16 TPM= 2.79 Transcript Type= protein_coding chr4 82863211 82891184 82863211 82891184 - ENST00000436790.6@SEC31A ENST00000436790.6 protein_coding 82891088,82881858,82880799,82878730,82875727,82874611,82871944,82870325,82867155,82866808,82864362,82863211 82891184,82881940,82880922,82878928,82875822,82874751,82872086,82870424,82867316,82866960,82864598,82863392 Gene ID= ENSG00000138674.16 TPM= 1.81 Transcript Type= processed_transcript chr4 82893009 82900960 82893009 82900960 - ENST00000504520.6@THAP9-AS1 ENST00000504520.6 antisense_RNA 82900334,82900077,82897989,82895692,82893009 82900960,82900223,82898062,82895774,82894847 Gene ID= ENSG00000251022.6 TPM= 14.94 Transcript Type= antisense_RNA chr4 82900752 82919969 82900752 82919969 + ENST00000302236.9@THAP9 ENST00000302236.9 protein_coding 82900752,82904736,82906324,82907785,82916944 82900882,82904931,82906627,82907935,82919969 Gene ID= ENSG00000168152.12 TPM= 1.81 Transcript Type= protein_coding chr4 82925548 83010821 82925548 83010821 - ENST00000510877.5@LIN54 ENST00000510877.5 protein_coding 83010484,82984824,82978883,82970327,82946258,82939889,82939539,82938413,82937227,82936279,82935981,82930943,82925548 83010821,82984876,82979006,82970465,82946474,82939962,82939736,82938504,82937298,82936381,82936118,82931145,82928303 Gene ID= ENSG00000189308.10 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr4 83035090 83075818 83035090 83075818 + ENST00000264389.6@COPS4 ENST00000264389.6 protein_coding 83035090,83045626,83049166,83049881,83056926,83057258,83063076,83066438,83068438,83075297 83035298,83045705,83049317,83049984,83057079,83057408,83063246,83066553,83068522,83075818 Gene ID= ENSG00000138663.8 TPM= 80.59 Transcript Type= protein_coding chr4 83035207 83075797 83035207 83075797 + ENST00000503682.5@COPS4 ENST00000503682.5 protein_coding 83035207,83045626,83049166,83049881,83056926,83057258,83063076,83065060,83066438,83068438,83075297 83035298,83045705,83049317,83049984,83057079,83057408,83063246,83065155,83066553,83068522,83075797 Gene ID= ENSG00000138663.8 TPM= 2.72 Transcript Type= protein_coding chr4 83263826 83284817 83263826 83284817 - transcript1570.chr4.nic@COQ2 transcript1570.chr4.nic protein_coding 83284512,83278948,83273496,83272087,83269860,83267586,83267090,83263826 83284817,83279114,83273617,83272172,83269993,83267774,83267208,83264363 Gene ID= ENSG00000173085.13 TPM= 2.72 Transcript Type= NA chr4 83266697 83284765 83266697 83284765 - ENST00000311461.7@COQ2 ENST00000311461.7 protein_coding 83284512,83278948,83273496,83272087,83269860,83267586,83266697 83284765,83279114,83273617,83272172,83269993,83267774,83267208 Gene ID= ENSG00000173085.13 TPM= 3.62 Transcript Type= protein_coding chr4 83407378 83455821 83407378 83455821 - transcript1577.chr4.nnic@HELQ transcript1577.chr4.nnic protein_coding 83455269,83453231,83448783,83446835,83446014,83443504,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407378 83455821,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560 Gene ID= ENSG00000163312.10 TPM= 1.81 Transcript Type= NA chr4 83407343 83455856 83407343 83455856 - ENST00000295488.7@HELQ ENST00000295488.7 protein_coding 83455397,83453231,83448783,83446835,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407343 83455856,83453945,83448961,83447035,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560 Gene ID= ENSG00000163312.10 TPM= 11.77 Transcript Type= protein_coding chr4 83407373 83455823 83407373 83455823 - ENST00000510985.1@HELQ ENST00000510985.1 protein_coding 83455397,83453231,83448783,83446014,83443517,83441305,83439863,83436858,83432126,83431664,83429524,83427563,83425994,83421563,83418093,83416731,83407373 83455823,83453945,83448961,83446086,83443614,83441403,83440008,83437097,83432267,83431768,83429746,83427720,83426092,83421736,83418206,83416865,83407560 Gene ID= ENSG00000163312.10 TPM= 1.81 Transcript Type= protein_coding chr4 83453183 83485100 83453183 83485100 - transcript1590.chr4.nnic@ABRAXAS1 transcript1590.chr4.nnic protein_coding 83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83453183 83485100,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83453945 Gene ID= ENSG00000163322.13 TPM= 2.72 Transcript Type= NA chr4 83459517 83485181 83459517 83485181 - ENST00000321945.11@ABRAXAS1 ENST00000321945.11 protein_coding 83484986,83482154,83476643,83472222,83470203,83469032,83467454,83463494,83459517 83485181,83482244,83476679,83472288,83470396,83469151,83467538,83463608,83462902 Gene ID= ENSG00000163322.13 TPM= 12.68 Transcript Type= protein_coding chr4 83455965 83462298 83455965 83462298 + ENST00000295491.8@MRPS18C ENST00000295491.8 protein_coding 83455965,83456909,83458346,83459740,83460973,83461121 83456177,83456958,83458429,83459797,83461032,83462298 Gene ID= ENSG00000163319.10 TPM= 55.24 Transcript Type= protein_coding chr4 83455983 83461423 83455983 83461423 + ENST00000507019.5@MRPS18C ENST00000507019.5 protein_coding 83455983,83456909,83459740,83460973,83461121 83456177,83456958,83459797,83461032,83461423 Gene ID= ENSG00000163319.10 TPM= 3.62 Transcript Type= protein_coding chr4 84582979 84651338 84582979 84651338 + ENST00000295887.5@CDS1 ENST00000295887.5 protein_coding 84582979,84604243,84609429,84617564,84619394,84631819,84633857,84635264,84638924,84640838,84643024,84645222,84648557 84583518,84604370,84609525,84617661,84619533,84631877,84633939,84635351,84638992,84640990,84643143,84645325,84651338 Gene ID= ENSG00000163624.5 TPM= 10.87 Transcript Type= protein_coding chr4 84669551 84737257 84669551 84737257 - transcript1608.chr4.nic@WDFY3 transcript1608.chr4.nic protein_coding 84737184,84736170,84735043,84733382,84726861,84724426,84721409,84718422,84716896,84715298,84713159,84709293,84708909,84705394,84704338,84702353,84696732,84695970,84692885,84691631,84690506,84688086,84683943,84682374,84678919,84678168,84677199,84669551 84737257,84736327,84735120,84733609,84726911,84724594,84721572,84718570,84717016,84715383,84713239,84709347,84709028,84705511,84704444,84702506,84696823,84696182,84693032,84691785,84690664,84688265,84684125,84682470,84679242,84678279,84677396,84672991 Gene ID= ENSG00000163625.15 TPM= 6.34 Transcript Type= NA chr4 86013874 86594625 86013874 86594625 - ENST00000641051.1@MAPK10 ENST00000641051.1 protein_coding 86593910,86453030,86354530,86194336,86159298,86107223,86103186,86101894,86101052,86098524,86067773,86064266,86031368,86029197,86013874 86594625,86453181,86354644,86194407,86159467,86107352,86103244,86102032,86101217,86098595,86067955,86064390,86031431,86029274,86017370 Gene ID= ENSG00000109339.20 TPM= 2.11 Transcript Type= protein_coding chr4 86010395 86360222 86010395 86360222 - ENST00000638225.1@MAPK10 ENST00000638225.1 protein_coding 86359658,86354530,86194309,86159298,86107223,86103186,86101894,86101052,86098524,86067773,86064266,86031368,86029197,86010395 86360222,86354644,86194407,86159467,86107352,86103244,86102032,86101217,86098595,86067955,86064390,86031431,86029274,86017370 Gene ID= ENSG00000109339.20 TPM= 2.17 Transcript Type= protein_coding chr4 86012491 86358509 86012491 86358509 - ENST00000641066.1@MAPK10 ENST00000641066.1 protein_coding 86358208,86354530,86194336,86159298,86107223,86103186,86101894,86101052,86098524,86067773,86064266,86031368,86029197,86012491 86358509,86354644,86194407,86159467,86107352,86103244,86102032,86101217,86098595,86067955,86064390,86031431,86029274,86017370 Gene ID= ENSG00000109339.20 TPM= 1.2 Transcript Type= protein_coding chr4 86012488 86360097 86012488 86360097 - ENST00000641462.1@MAPK10 ENST00000641462.1 protein_coding 86359658,86354530,86194336,86159298,86107223,86103186,86101894,86101052,86098524,86067773,86064266,86031368,86029197,86012488 86360097,86354644,86194407,86159467,86107352,86103244,86102032,86101217,86098595,86067955,86064390,86031431,86029274,86017370 Gene ID= ENSG00000109339.20 TPM= 4.28 Transcript Type= protein_coding chr4 86015135 86360092 86015135 86360092 - ENST00000395169.9@MAPK10 ENST00000395169.9 protein_coding 86359658,86354530,86194336,86159298,86107223,86103186,86101894,86101052,86089206,86067773,86064266,86031368,86029197,86015135 86360092,86354644,86194407,86159467,86107352,86103244,86102032,86101217,86089277,86067955,86064390,86031431,86029274,86017375 Gene ID= ENSG00000109339.20 TPM= 2.17 Transcript Type= protein_coding chr4 86016478 86360051 86016478 86360051 - ENST00000395157.9@MAPK10 ENST00000395157.9 protein_coding 86359658,86354530,86194336,86159298,86107223,86103186,86101894,86101052,86098524,86067773,86064266,86031368,86029197,86016478 86360051,86354644,86194407,86159467,86107352,86103244,86102032,86101217,86098595,86067955,86064390,86031431,86029274,86017375 Gene ID= ENSG00000109339.20 TPM= 2.63 Transcript Type= protein_coding chr4 86191598 86360051 86191598 86360051 - ENST00000641022.1@MAPK10 ENST00000641022.1 protein_coding 86359658,86354530,86191598 86360051,86354644,86194407 Gene ID= ENSG00000109339.20 TPM= 1.72 Transcript Type= retained_intron chr4 86594271 86815147 86594271 86815147 + transcript1644.chr4.nnic@PTPN13 transcript1644.chr4.nnic protein_coding 86594271,86635252,86672365,86686710,86689005,86693587,86716530,86717024,86722212,86732400,86732592,86734303,86734737,86735594,86741634,86744966,86750470,86751027,86758260,86758678,86758942,86762727,86764593,86765395,86766432,86767817,86769769,86770101,86771171,86772778,86774373,86775171,86775442,86780402,86782201,86784465,86785231,86785848,86796874,86799101,86803709,86805279,86807560,86809769,86811046,86814456 86594789,86635371,86672543,86686775,86689190,86693674,86716625,86717117,86722434,86732474,86732766,86734456,86734875,86735746,86741816,86745128,86750887,86751124,86758349,86758785,86759073,86763190,86764724,86765488,86766517,86767976,86769983,86770199,86771535,86772958,86774531,86775342,86775652,86780472,86782262,86784558,86785368,86785936,86796929,86799204,86803857,86805369,86807897,86809984,86811108,86815147 Gene ID= ENSG00000163629.12 TPM= 2.72 Transcript Type= NA chr4 86594335 86693071 86594335 86693071 + transcript1646.chr4.nic@PTPN13 transcript1646.chr4.nic protein_coding 86594335,86635252,86672365,86686710,86689005 86594789,86635371,86672543,86686775,86693071 Gene ID= ENSG00000163629.12 TPM= 1.81 Transcript Type= NA chr4 86594315 86815171 86594315 86815171 + ENST00000436978.5@PTPN13 ENST00000436978.5 protein_coding 86594315,86635252,86672365,86686710,86689005,86693587,86701241,86716530,86717024,86722212,86732400,86732592,86734303,86734737,86735594,86741634,86744966,86750470,86751027,86753009,86758260,86758678,86758942,86762727,86764593,86765395,86766432,86767817,86769769,86770101,86771171,86772778,86774373,86775171,86775442,86780402,86782201,86784465,86785231,86785848,86796874,86799101,86803709,86805279,86807560,86809769,86811046,86814456 86594789,86635371,86672543,86686775,86689190,86693674,86701801,86716625,86717117,86722434,86732474,86732766,86734456,86734875,86735746,86741816,86745128,86750887,86751124,86753065,86758349,86758785,86759073,86763190,86764739,86765488,86766517,86767976,86769983,86770199,86771535,86772958,86774531,86775342,86775652,86780472,86782262,86784558,86785368,86785936,86796929,86799204,86803857,86805369,86807897,86809984,86811108,86815171 Gene ID= ENSG00000163629.12 TPM= 1.81 Transcript Type= protein_coding chr4 86924894 86934850 86924894 86934850 - ENST00000508280.5@C4orf36 ENST00000508280.5 protein_coding 86934487,86933395,86924894 86934850,86933542,86926326 Gene ID= ENSG00000163633.10 TPM= 1.81 Transcript Type= retained_intron chr4 87007006 87134630 87007006 87134630 + transcript1656.chr4.nnic@AFF1 transcript1656.chr4.nnic protein_coding 87007006,87046164,87046695,87084114,87089984,87091793,87094913,87105628,87105808,87108157,87114367,87125035,87126099,87127026,87127643,87131083,87131793,87132271,87134471 87007424,87046286,87047588,87084164,87090070,87091829,87094969,87105682,87105845,87108315,87115299,87125143,87126336,87127117,87127703,87131219,87131864,87132408,87134630 Gene ID= ENSG00000172493.20 TPM= 1.81 Transcript Type= NA chr4 87160103 87220608 87160103 87220608 - ENST00000273963.9@KLHL8 ENST00000273963.9 protein_coding 87220418,87195324,87185251,87183203,87178477,87176757,87170447,87170079,87163878,87160103 87220608,87195690,87185799,87183389,87178620,87176868,87170615,87170238,87164079,87163642 Gene ID= ENSG00000145332.13 TPM= 14.49 Transcript Type= protein_coding chr4 87336610 87391386 87336610 87391386 - ENST00000358290.8@HSD17B11 ENST00000358290.8 protein_coding 87390861,87382255,87374699,87372709,87357279,87340490,87336610 87391386,87382362,87374830,87372815,87357416,87340606,87337366 Gene ID= ENSG00000198189.10 TPM= 153.04 Transcript Type= protein_coding chr4 87422584 87458345 87422584 87458345 + transcript1671.chr4.nic@NUDT9 transcript1671.chr4.nic protein_coding 87422584,87434981,87438277,87441829,87449142,87451589,87454371,87457843 87422617,87435220,87438372,87441915,87449253,87451735,87454455,87458345 Gene ID= ENSG00000170502.12 TPM= 4.07 Transcript Type= NA chr4 87422582 87458345 87422582 87458345 + ENST00000302174.8@NUDT9 ENST00000302174.8 protein_coding 87422582,87434981,87438277,87441829,87449142,87451589,87454371,87457843 87423012,87435220,87438372,87441915,87449253,87451735,87454455,87458345 Gene ID= ENSG00000170502.12 TPM= 63.84 Transcript Type= protein_coding chr4 87473335 87529504 87473335 87529504 - ENST00000282470.10@SPARCL1 ENST00000282470.10 protein_coding 87529045,87499521,87494981,87493582,87491618,87490760,87490273,87482424,87480372,87479430,87473335 87529504,87499585,87495127,87494598,87491690,87490878,87490393,87482560,87480520,87479578,87473803 Gene ID= ENSG00000152583.12 TPM= 212.8 Transcript Type= protein_coding chr4 87975667 87983426 87975667 87983426 + ENST00000237623.11@SPP1 ENST00000237623.11 protein_coding 87975667,87976882,87977059,87980046,87981475,87982492 87975800,87976949,87977097,87980126,87981798,87983426 Gene ID= ENSG00000118785.13 TPM= 4.53 Transcript Type= protein_coding chr4 87975688 87983297 87975688 87983297 + ENST00000395080.7@SPP1 ENST00000395080.7 protein_coding 87975688,87976882,87977059,87980046,87980393,87981475,87982492 87975800,87976949,87977097,87980126,87980434,87981798,87983297 Gene ID= ENSG00000118785.13 TPM= 14.49 Transcript Type= protein_coding chr4 88007668 88077777 88007668 88077777 + ENST00000237596.6@PKD2 ENST00000237596.6 protein_coding 88007668,88019458,88036220,88038251,88043233,88046642,88051991,88056086,88057983,88061906,88065374,88065762,88067898,88074812,88075458 88008328,88019571,88036353,88038501,88043457,88046870,88052158,88056267,88058103,88062004,88065495,88065879,88068061,88074959,88077777 Gene ID= ENSG00000118762.7 TPM= 28.07 Transcript Type= protein_coding chr4 88091688 88158907 88091688 88158907 - transcript1692.chr4.nic@ABCG2 transcript1692.chr4.nic protein_coding 88158577,88139793,88132576,88131803,88131061,88121635,88118109,88114957,88113303,88107184,88101230,88099324,88097453,88095520,88094577,88091688 88158907,88140014,88132635,88131917,88131213,88121792,88118260,88115058,88113553,88107266,88101319,88099448,88097607,88095609,88094659,88092381 Gene ID= ENSG00000118777.10 TPM= 3.62 Transcript Type= NA chr4 88261712 88284223 88261712 88284223 - transcript1696.chr4.nic@PPM1K transcript1696.chr4.nic protein_coding 88283775,88278144,88277143,88268741,88268190,88265001,88261712 88284223,88278642,88277243,88268906,88268334,88265135,88262726 Gene ID= ENSG00000163644.14 TPM= 4.07 Transcript Type= NA chr4 88257620 88284736 88257620 88284736 - ENST00000608933.5@PPM1K ENST00000608933.5 protein_coding 88284406,88278144,88277143,88268741,88268190,88265001,88257620 88284736,88278642,88277243,88268906,88268334,88265135,88262726 Gene ID= ENSG00000163644.14 TPM= 35.77 Transcript Type= protein_coding chr4 88274928 88284561 88274928 88284561 - transcript1701.chr4.nnic@PPM1K transcript1701.chr4.nnic protein_coding 88284406,88278144,88277143,88274928 88284561,88278642,88277243,88276777 Gene ID= ENSG00000163644.14 TPM= 1.81 Transcript Type= NA chr4 88378739 88443097 88378739 88443097 + ENST00000380265.9@HERC6 ENST00000380265.9 protein_coding 88378739,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88404876,88405554,88408524,88413077,88417425,88423860,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234 88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88404997,88405613,88408617,88413266,88417579,88423973,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443097 Gene ID= ENSG00000138642.14 TPM= 1.81 Transcript Type= protein_coding chr4 88378863 88443111 88378863 88443111 + ENST00000264346.11@HERC6 ENST00000264346.11 protein_coding 88378863,88383221,88385499,88390652,88393488,88396015,88396851,88398142,88404876,88405554,88408524,88413077,88417425,88423860,88424595,88428580,88431162,88435725,88436905,88437711,88439874,88440148,88442234 88379120,88383380,88385575,88390879,88393582,88396142,88396987,88398209,88404997,88405613,88408617,88413266,88417579,88423973,88424702,88428750,88431305,88435891,88436971,88437781,88440057,88440250,88443111 Gene ID= ENSG00000138642.14 TPM= 15.39 Transcript Type= protein_coding chr4 88457117 88506163 88457117 88506163 + ENST00000264350.7@HERC5 ENST00000264350.7 protein_coding 88457117,88459347,88460095,88462135,88463532,88463855,88467059,88468346,88469157,88470614,88472409,88475841,88479353,88486115,88487069,88489166,88493012,88494165,88499926,88500915,88504232,88504495,88505673 88457534,88459470,88460171,88462356,88463623,88463985,88467204,88468422,88469260,88470673,88472502,88476030,88479507,88486228,88487179,88489336,88493155,88494331,88499992,88500985,88504415,88504597,88506163 Gene ID= ENSG00000138646.8 TPM= 27.17 Transcript Type= protein_coding chr4 88520985 88523813 88520985 88523813 - ENST00000273968.4@PYURF ENST00000273968.4 protein_coding 88523498,88520985 88523813,88522029 Gene ID= ENSG00000145337.4 TPM= 236.35 Transcript Type= protein_coding chr4 88592431 88708536 88592431 88708536 + transcript1714.chr4.nic@HERC3 transcript1714.chr4.nic protein_coding 88592431,88595557,88597950,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752 88592574,88595614,88598087,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708536 Gene ID= ENSG00000138641.15 TPM= 3.02 Transcript Type= NA chr4 88592423 88708542 88592423 88708542 + ENST00000402738.5@HERC3 ENST00000402738.5 protein_coding 88592423,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752 88592574,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708542 Gene ID= ENSG00000138641.15 TPM= 11.17 Transcript Type= protein_coding chr4 88593205 88708536 88593205 88708536 + transcript1716.chr4.nnic@HERC3 transcript1716.chr4.nnic protein_coding 88593205,88595557,88605795,88649840,88652012,88652869,88654042,88655174,88655875,88658415,88662431,88664153,88667377,88667892,88669860,88670139,88676218,88676334,88677964,88680093,88681159,88686736,88687217,88704098,88704508,88706752 88593420,88595614,88606049,88649999,88652088,88653090,88654133,88655304,88656035,88658491,88662555,88664212,88667488,88668081,88670023,88670252,88676241,88676423,88678134,88680236,88681325,88686802,88687299,88704281,88704610,88708536 Gene ID= ENSG00000138641.15 TPM= 3.02 Transcript Type= NA chr4 88725955 88823361 88725955 88823361 - ENST00000395002.6@FAM13A ENST00000395002.6 protein_coding 88822976,88805011,88790586,88787753,88781165,88767983,88767553,88758754,88750424,88749771,88748952,88747631,88746932,88739030,88732002,88731327,88725955 88823361,88805052,88790627,88787932,88781351,88768059,88767595,88758901,88750637,88749909,88749033,88747851,88747015,88739125,88732198,88731428,88728659 Gene ID= ENSG00000138640.14 TPM= 4.53 Transcript Type= protein_coding chr4 88936290 89057174 88936290 89057174 - transcript1729.chr4.nic@FAM13A transcript1729.chr4.nic protein_coding 89056938,89029460,89020460,88936290 89057174,89029649,89020669,88938241 Gene ID= ENSG00000138640.14 TPM= 1.81 Transcript Type= NA chr4 88989619 89057174 88989619 89057174 - transcript1730.chr4.nic@FAM13A transcript1730.chr4.nic protein_coding 89056938,89029460,89020460,88989619 89057174,89029649,89020669,88991150 Gene ID= ENSG00000138640.14 TPM= 1.81 Transcript Type= NA chr4 89111500 89114899 89111500 89114899 + ENST00000603357.2@TIGD2 ENST00000603357.2 protein_coding 89111500,89112067 89111883,89114899 Gene ID= ENSG00000180346.3 TPM= 2.72 Transcript Type= protein_coding chr4 89726053 89837228 89726053 89837228 - ENST00000394991.7@SNCA ENST00000394991.7 protein_coding 89836962,89835547,89828143,89822246,89729194,89726053 89837228,89835692,89828184,89822388,89729277,89726660 Gene ID= ENSG00000145335.15 TPM= 5.43 Transcript Type= protein_coding chr4 89879532 89954629 89879532 89954629 + ENST00000394980.5@MMRN1 ENST00000394980.5 protein_coding 89879532,89894724,89909276,89911944,89923168,89927795,89934810,89951605,89952997 89879602,89895594,89909395,89912050,89923272,89927968,89936798,89951751,89954629 Gene ID= ENSG00000138722.9 TPM= 1.81 Transcript Type= protein_coding chr4 94207611 94291290 94207611 94291290 + ENST00000359052.8@SMARCAD1 ENST00000359052.8 protein_coding 94207611,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473 94207735,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94291290 Gene ID= ENSG00000163104.17 TPM= 3.62 Transcript Type= protein_coding chr4 94207845 94290821 94207845 94290821 + ENST00000457823.6@SMARCAD1 ENST00000457823.6 protein_coding 94207845,94208346,94226119,94233954,94236952,94240906,94249654,94250752,94252616,94264707,94270728,94273617,94274738,94274890,94276339,94277022,94278422,94278616,94278923,94280592,94281472,94283121,94284960,94289473 94208070,94208584,94226296,94234122,94237018,94241006,94249755,94250833,94253007,94264906,94270818,94273716,94274797,94274965,94276474,94277159,94278517,94278733,94279050,94280780,94281590,94283303,94285069,94290821 Gene ID= ENSG00000163104.17 TPM= 5.43 Transcript Type= protein_coding chr4 94451988 94668220 94451988 94668220 + transcript1756.chr4.nnic@PDLIM5 transcript1756.chr4.nnic protein_coding 94451988,94455247,94523724,94573351,94575616,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978 94452138,94455384,94523875,94573393,94576034,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94668220 Gene ID= ENSG00000163110.14 TPM= 7.24 Transcript Type= NA chr4 94451864 94588126 94451864 94588126 + transcript1757.chr4.nic@PDLIM5 transcript1757.chr4.nic protein_coding 94451864,94455247,94523724,94573351,94575616,94585565,94586408,94586989 94451995,94455384,94523875,94573393,94576034,94585737,94586444,94588126 Gene ID= ENSG00000163110.14 TPM= 1.81 Transcript Type= NA chr4 94451902 94668223 94451902 94668223 + ENST00000317968.8@PDLIM5 ENST00000317968.8 protein_coding 94451902,94455247,94523724,94573351,94575616,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978 94451995,94455384,94523875,94573393,94576034,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94668223 Gene ID= ENSG00000163110.14 TPM= 55.24 Transcript Type= protein_coding chr4 94451956 94665500 94451956 94665500 + ENST00000542407.5@PDLIM5 ENST00000542407.5 protein_coding 94451956,94455247,94523724,94573351,94575943,94585565,94586408,94618004,94640276,94654460,94657427,94662422,94663978 94451995,94455384,94523875,94573393,94576034,94585737,94586444,94618191,94640450,94654640,94657547,94662537,94665500 Gene ID= ENSG00000163110.14 TPM= 4.53 Transcript Type= protein_coding chr4 95216123 95335633 95216123 95335633 - transcript1761.chr4.nic@UNC5C transcript1761.chr4.nic protein_coding 95335410,95301606,95278259,95250487,95244977,95242429,95222210,95219985,95218969,95216123 95335633,95301749,95278362,95250667,95245144,95242593,95222266,95220176,95219313,95216211 Gene ID= ENSG00000182168.14 TPM= 1.81 Transcript Type= NA chr4 95241456 95335633 95241456 95335633 - transcript1762.chr4.nic@UNC5C transcript1762.chr4.nic protein_coding 95335410,95301606,95278259,95250487,95244977,95241456 95335633,95301749,95278362,95250667,95245144,95242593 Gene ID= ENSG00000182168.14 TPM= 1.81 Transcript Type= NA chr4 98261374 98443866 98261374 98443866 + transcript1772.chr4.nic@RAP1GDS1 transcript1772.chr4.nic protein_coding 98261374,98293408,98343139,98352476,98391952,98404477,98416745,98417367,98418657,98420019,98421255,98433936,98436940,98441990 98261569,98293515,98343319,98352601,98392080,98404602,98416888,98417498,98418791,98420144,98421394,98434062,98437068,98443866 Gene ID= ENSG00000138698.14 TPM= 2.72 Transcript Type= NA chr4 98261453 98443861 98261453 98443861 + ENST00000408927.7@RAP1GDS1 ENST00000408927.7 protein_coding 98261453,98293408,98343139,98352476,98379017,98391952,98404477,98416745,98417367,98418657,98420019,98421255,98433936,98436940,98441990 98261569,98293515,98343261,98352601,98379163,98392080,98404602,98416888,98417498,98418791,98420144,98421394,98434062,98437068,98443861 Gene ID= ENSG00000138698.14 TPM= 17.21 Transcript Type= protein_coding chr4 98470367 98658629 98470367 98658629 - ENST00000305798.7@TSPAN5 ENST00000305798.7 protein_coding 98658146,98507678,98486738,98482005,98478685,98476413,98476189,98470367 98658629,98507728,98486884,98482175,98478810,98476460,98476305,98472587 Gene ID= ENSG00000168785.7 TPM= 6.34 Transcript Type= protein_coding chr4 98871684 98930637 98871684 98930637 - ENST00000450253.6@EIF4E ENST00000450253.6 protein_coding 98929095,98901876,98891237,98887889,98887079,98884922,98871684 98930637,98901982,98891332,98887952,98887192,98885061,98881142 Gene ID= ENSG00000151247.12 TPM= 61.58 Transcript Type= protein_coding chr4 98995620 99062813 98995620 99062813 + ENST00000296411.10@METAP1 ENST00000296411.10 protein_coding 98995620,99028867,99034230,99035400,99039374,99041043,99043249,99045179,99048733,99057753,99061154 98995867,99028918,99034342,99035460,99039465,99041126,99043387,99045310,99048876,99057818,99062813 Gene ID= ENSG00000164024.11 TPM= 16.3 Transcript Type= protein_coding chr4 99070978 99088751 99070978 99088751 - ENST00000296412.12@ADH5 ENST00000296412.12 protein_coding 99088689,99085115,99081975,99081365,99076704,99076292,99074914,99072573,99070978 99088751,99085216,99082116,99081452,99076923,99076552,99075049,99072711,99072441 Gene ID= ENSG00000197894.10 TPM= 105.95 Transcript Type= protein_coding chr4 99304909 99321439 99304909 99321439 - transcript1792.chr4.nnic@ADH1B transcript1792.chr4.nnic protein_coding 99321314,99318785,99318046,99316215,99315898,99313821,99311521,99310765,99305611,99304909 99321439,99318886,99318184,99316302,99316117,99314081,99311656,99310903,99307864,99305523 Gene ID= ENSG00000196616.13 TPM= 157.56 Transcript Type= NA chr4 99336492 99353027 99336492 99353027 - ENST00000515683.5@ADH1C ENST00000515683.5 protein_coding 99352658,99347745,99347006,99345179,99344862,99342795,99340575,99339577,99336492 99353027,99347846,99347144,99345266,99345081,99343055,99340710,99339715,99336776 Gene ID= ENSG00000248144.5 TPM= 2.72 Transcript Type= protein_coding chr4 99546698 99563723 99546698 99563723 - transcript1798.chr4.nic@TRMT10A transcript1798.chr4.nic protein_coding 99563558,99559154,99558049,99557345,99556146,99553785,99550885,99546698 99563723,99559350,99558211,99557416,99556220,99553934,99550990,99549356 Gene ID= ENSG00000145331.13 TPM= 4.07 Transcript Type= NA chr4 99546709 99564017 99546709 99564017 - ENST00000394877.7@TRMT10A ENST00000394877.7 protein_coding 99563913,99559154,99558049,99557345,99556146,99553785,99550885,99546709 99564017,99559350,99558211,99557416,99556220,99553934,99550990,99549356 Gene ID= ENSG00000145331.13 TPM= 6.79 Transcript Type= protein_coding chr4 99878336 99894490 99878336 99894490 - ENST00000499666.6@LAMTOR3 ENST00000499666.6 protein_coding 99894335,99893955,99892000,99887296,99885542,99884062,99878336 99894490,99894000,99892034,99887354,99885675,99884125,99882067 Gene ID= ENSG00000109270.12 TPM= 44.37 Transcript Type= protein_coding chr4 99896248 99946726 99896248 99946726 - ENST00000442697.6@DNAJB14 ENST00000442697.6 protein_coding 99946439,99930450,99923040,99908711,99906517,99905597,99903726,99896248 99946726,99930621,99923185,99908896,99906611,99905706,99903898,99901152 Gene ID= ENSG00000164031.16 TPM= 8.15 Transcript Type= protein_coding chr4 99948088 99950388 99948088 99950388 - ENST00000296417.5@H2AFZ ENST00000296417.5 protein_coding 99950168,99949663,99949273,99948811,99948088 99950388,99949740,99949386,99948940,99948523 Gene ID= ENSG00000164032.11 TPM= 115 Transcript Type= protein_coding chr4 100395341 100518093 100395341 100518093 - ENST00000296420.8@EMCN ENST00000296420.8 protein_coding 100517851,100479917,100475038,100465423,100447533,100423312,100423021,100421282,100417117,100415898,100410282,100395341 100518093,100480039,100475109,100465539,100447571,100423404,100423080,100421377,100417141,100415959,100410355,100398373 Gene ID= ENSG00000164035.9 TPM= 39.84 Transcript Type= protein_coding chr4 101023430 101347480 101023430 101347480 - ENST00000394854.7@PPP3CA ENST00000394854.7 protein_coding 101346739,101195916,101108954,101099611,101098367,101093776,101083186,101080532,101063232,101061087,101040482,101032267,101029166,101023430 101347480,101196116,101109078,101099722,101098512,101093915,101083263,101080626,101063357,101061161,101040566,101032364,101029195,101026061 Gene ID= ENSG00000138814.16 TPM= 18.11 Transcript Type= protein_coding chr4 101347780 101348883 101347780 101348883 + ENST00000527564.1@FLJ20021 ENST00000527564.1 lincRNA 101347780,101348324 101348009,101348883 Gene ID= ENSG00000254531.1 TPM= 6.34 Transcript Type= lincRNA chr4 101790607 102074810 101790607 102074810 + ENST00000428908.5@BANK1 ENST00000428908.5 protein_coding 101790607,101855035,101862526,101870505,101895305,101917993,102021514,102025201,102029960,102043839,102060211,102063075,102071275,102072345,102073684,102074005 101790950,101855189,101862664,101870644,101895410,101918189,102021592,102025509,102030265,102043907,102060389,102063138,102071304,102072400,102073748,102074810 Gene ID= ENSG00000153064.11 TPM= 4.07 Transcript Type= protein_coding chr4 101790607 102074739 101790607 102074739 + ENST00000322953.8@BANK1 ENST00000322953.8 protein_coding 101790607,101829808,101855035,101862526,101870505,101895305,101917993,102021514,102025201,102029960,102043839,102060211,102063075,102071275,102072345,102073684,102074005 101790950,101830206,101855189,101862664,101870644,101895410,101918189,102021592,102025509,102030265,102043907,102060389,102063138,102071304,102072400,102073748,102074739 Gene ID= ENSG00000153064.11 TPM= 5.89 Transcript Type= protein_coding chr4 102261666 102345139 102261666 102345139 - ENST00000394833.6@SLC39A8 ENST00000394833.6 protein_coding 102344444,102315668,102307436,102304989,102304317,102267872,102267490,102261666 102345139,102315830,102307605,102305111,102304481,102268079,102267674,102263193 Gene ID= ENSG00000138821.12 TPM= 7.24 Transcript Type= protein_coding chr4 102261666 102345474 102261666 102345474 - ENST00000356736.4@SLC39A8 ENST00000356736.4 protein_coding 102345345,102344444,102315668,102307436,102304989,102304317,102267872,102267490,102261666 102345474,102344915,102315830,102307605,102305111,102304481,102268079,102267674,102263193 Gene ID= ENSG00000138821.12 TPM= 8.15 Transcript Type= protein_coding chr4 102794383 102827812 102794383 102827812 - ENST00000453744.6@UBE2D3 ENST00000453744.6 protein_coding 102827427,102826485,102809792,102809672,102802561,102801454,102799407,102794383 102827812,102826636,102809855,102809703,102802638,102801559,102799500,102797460 Gene ID= ENSG00000109332.19 TPM= 173.99 Transcript Type= protein_coding chr4 102794384 102827914 102794384 102827914 - transcript1867.chr4.nic@UBE2D3 transcript1867.chr4.nic protein_coding 102826485,102809792,102809672,102802561,102801454,102799407,102794384 102827914,102809855,102809703,102802638,102801559,102799500,102797460 Gene ID= ENSG00000109332.19 TPM= 57.18 Transcript Type= NA chr4 102795976 102827948 102795976 102827948 - ENST00000394801.8@UBE2D3 ENST00000394801.8 protein_coding 102827592,102826485,102809792,102809672,102802561,102801454,102799407,102795976 102827948,102826636,102809855,102809703,102802638,102801559,102799500,102797460 Gene ID= ENSG00000109332.19 TPM= 60.03 Transcript Type= protein_coding chr4 102795976 102828159 102795976 102828159 - ENST00000394803.9@UBE2D3 ENST00000394803.9 protein_coding 102827944,102826485,102809792,102809672,102802561,102801454,102799407,102795976 102828159,102826636,102809855,102809703,102802638,102801559,102799500,102797460 Gene ID= ENSG00000109332.19 TPM= 51.88 Transcript Type= protein_coding chr4 102868978 102889242 102868978 102889242 + ENST00000273986.8@CISD2 ENST00000273986.8 protein_coding 102868978,102885216,102887341 102869187,102885430,102889242 Gene ID= ENSG00000145354.9 TPM= 95.99 Transcript Type= protein_coding chr4 103025493 103076647 103025493 103076647 - transcript1879.chr4.nic@SLC9B2 transcript1879.chr4.nic protein_coding 103076184,103067461,103066327,103050240,103048893,103047051,103044890,103043296,103031700,103028747,103025493 103076647,103067592,103066507,103050382,103049020,103047226,103044996,103043445,103031808,103028883,103026591 Gene ID= ENSG00000164038.14 TPM= 1.81 Transcript Type= NA chr4 103025490 103076773 103025490 103076773 - ENST00000394785.7@SLC9B2 ENST00000394785.7 protein_coding 103076184,103067461,103066327,103057801,103050240,103048893,103047051,103044890,103043296,103031700,103028747,103025490 103076773,103067592,103066507,103057971,103050382,103049020,103047226,103044996,103043445,103031808,103028883,103026591 Gene ID= ENSG00000164038.14 TPM= 10.87 Transcript Type= protein_coding chr4 103077612 103099816 103077612 103099816 - transcript1883.chr4.nic@BDH2 transcript1883.chr4.nic protein_coding 103099783,103098644,103096183,103095203,103092600,103091177,103086480,103085349,103082871,103082081,103077612 103099816,103098802,103096274,103095281,103092696,103091285,103086540,103085462,103082929,103082173,103079755 Gene ID= ENSG00000164039.14 TPM= 3.62 Transcript Type= NA chr4 103079435 103099883 103079435 103099883 - ENST00000296424.8@BDH2 ENST00000296424.8 protein_coding 103099783,103096183,103095203,103092600,103091177,103086480,103085349,103082871,103082081,103079435 103099883,103096274,103095281,103092696,103091285,103086540,103085462,103082929,103082173,103079755 Gene ID= ENSG00000164039.14 TPM= 57.95 Transcript Type= protein_coding chr4 103079477 103099828 103079477 103099828 - ENST00000492366.5@BDH2 ENST00000492366.5 protein_coding 103099783,103096183,103095203,103092600,103091177,103085349,103082871,103082081,103079477 103099828,103096274,103095281,103092696,103091285,103086540,103082929,103082173,103079755 Gene ID= ENSG00000164039.14 TPM= 11.77 Transcript Type= retained_intron chr4 105369568 105474089 105369568 105474089 - transcript1901.chr4.nic@PPA2 transcript1901.chr4.nic protein_coding 105473894,105456681,105453598,105449350,105446383,105399037,105396249,105386567,105370837,105369568 105474089,105456745,105453642,105449403,105446502,105399164,105396334,105386636,105370873,105369753 Gene ID= ENSG00000138777.19 TPM= 1.81 Transcript Type= NA chr4 105369077 105474081 105369077 105474081 - ENST00000341695.9@PPA2 ENST00000341695.9 protein_coding 105473894,105456681,105453598,105449350,105446383,105437950,105424196,105399037,105396249,105386567,105370837,105369077 105474081,105456745,105453642,105449403,105446502,105438036,105424322,105399164,105396334,105386636,105370873,105369753 Gene ID= ENSG00000138777.19 TPM= 51.62 Transcript Type= protein_coding chr4 105369565 105474050 105369565 105474050 - ENST00000354147.7@PPA2 ENST00000354147.7 protein_coding 105473894,105399037,105396249,105386567,105370837,105369565 105474050,105399164,105396334,105386636,105370873,105369753 Gene ID= ENSG00000138777.19 TPM= 10.87 Transcript Type= protein_coding chr4 105446202 105474059 105446202 105474059 - ENST00000499847.6@PPA2 ENST00000499847.6 protein_coding 105473894,105456681,105453598,105449350,105446202 105474059,105456745,105453642,105449403,105446502 Gene ID= ENSG00000138777.19 TPM= 1.81 Transcript Type= retained_intron chr4 105682627 105708681 105682627 105708681 - ENST00000340139.9@INTS12 ENST00000340139.9 protein_coding 105708638,105703648,105699850,105695516,105693299,105691976,105686692,105682627 105708681,105703809,105700014,105695668,105693486,105692135,105686838,105683317 Gene ID= ENSG00000138785.14 TPM= 8.15 Transcript Type= protein_coding chr4 105708818 105847728 105708818 105847728 + ENST00000515279.5@GSTCD ENST00000515279.5 protein_coding 105708818,105717593,105719060,105726579,105729406,105822954,105823231,105825672,105834461,105837859,105842065,105845441 105709016,105718039,105719527,105726830,105729499,105823069,105823275,105825800,105834594,105837889,105842134,105847728 Gene ID= ENSG00000138780.14 TPM= 2.72 Transcript Type= protein_coding chr4 105895437 105971674 105895437 105971674 + ENST00000379987.6@NPNT ENST00000379987.6 protein_coding 105895437,105897901,105927336,105937009,105938301,105940075,105940514,105942307,105958471,105959028,105967188,105968895 105895723,105898001,105927428,105937128,105938420,105940209,105940636,105942702,105958557,105959126,105967444,105971674 Gene ID= ENSG00000168743.12 TPM= 3.62 Transcript Type= protein_coding chr4 106046080 106316230 106046080 106316230 - ENST00000361687.8@TBCK ENST00000361687.8 protein_coding 106315931,106308768,106295094,106251866,106250418,106248921,106248245,106247139,106244626,106242470,106236759,106236390,106235269,106233588,106232938,106231729,106230363,106212750,106194718,106193609,106171095,106116203,106095482,106046080 106316230,106308989,106295166,106252007,106250478,106248982,106248306,106247287,106244764,106242569,106236808,106236519,106235367,106233650,106233064,106231779,106230446,106212835,106194754,106193770,106171270,106116378,106095641,106046680 Gene ID= ENSG00000145348.16 TPM= 9.96 Transcript Type= protein_coding chr4 106046091 106316206 106046091 106316206 - ENST00000394706.7@TBCK ENST00000394706.7 protein_coding 106315931,106308768,106295094,106262098,106260437,106251983,106250418,106248921,106248245,106247139,106244626,106242470,106236759,106236390,106235269,106233588,106232938,106231729,106230363,106212750,106194718,106193609,106171095,106116203,106095482,106046091 106316206,106308989,106295166,106262212,106260510,106252007,106250478,106248982,106248306,106247287,106244764,106242569,106236808,106236519,106235367,106233650,106233064,106231779,106230446,106212835,106194754,106193770,106171270,106116378,106095641,106046680 Gene ID= ENSG00000145348.16 TPM= 2.72 Transcript Type= protein_coding chr4 106316511 106349228 106316511 106349228 + transcript1923.chr4.nnic@AIMP1 transcript1923.chr4.nnic protein_coding 106316511,106320866,106324985,106327451,106328076,106331672,106336869,106347526 106316594,106321451,106325118,106327564,106328243,106331883,106337037,106349228 Gene ID= ENSG00000164022.16 TPM= 3.17 Transcript Type= NA chr4 106316507 106349226 106316507 106349226 + ENST00000394701.4@AIMP1 ENST00000394701.4 protein_coding 106316507,106324985,106327451,106328076,106331672,106336869,106347526 106316594,106325118,106327564,106328243,106331883,106337037,106349226 Gene ID= ENSG00000164022.16 TPM= 33.96 Transcript Type= protein_coding chr4 106316552 106347767 106316552 106347767 + transcript1927.chr4.nnic@AIMP1 transcript1927.chr4.nnic protein_coding 106316552,106324985,106327451,106328076,106331672,106336869,106347526 106321451,106325118,106327564,106328243,106331883,106337037,106347767 Gene ID= ENSG00000164022.16 TPM= 1.81 Transcript Type= NA chr4 107613666 107720452 107613666 107720452 - ENST00000265174.4@PAPSS1 ENST00000265174.4 protein_coding 107720120,107701171,107693771,107687039,107682015,107659959,107656896,107654695,107653491,107644802,107631631,107613666 107720452,107701285,107694006,107687177,107682133,107660072,107657007,107654900,107653626,107645070,107631860,107614387 Gene ID= ENSG00000138801.8 TPM= 44.37 Transcript Type= protein_coding chr4 107931369 107953457 107931369 107953457 + ENST00000332884.10@CYP2U1 ENST00000332884.10 protein_coding 107931369,107944970,107947376,107949350,107950245 107932133,107945605,107947537,107949517,107953457 Gene ID= ENSG00000155016.17 TPM= 21.73 Transcript Type= protein_coding chr4 107931568 107953460 107931568 107953460 + transcript1935.chr4.nnic@CYP2U1 transcript1935.chr4.nnic protein_coding 107931568,107947376,107949350,107950245 107932133,107947537,107949517,107953460 Gene ID= ENSG00000155016.17 TPM= 2.72 Transcript Type= NA chr4 107989784 108035175 107989784 108035175 + ENST00000309522.7@HADH ENST00000309522.7 protein_coding 107989784,108009759,108014431,108019540,108023474,108027688,108033176,108034239 107990064,108009887,108014588,108019666,108023563,108027760,108033292,108035175 Gene ID= ENSG00000138796.16 TPM= 222.31 Transcript Type= protein_coding chr4 107989837 108035149 107989837 108035149 + ENST00000639146.1@HADH ENST00000639146.1 protein_coding 107989837,108009759,108014431,108019540,108023474,108027688,108027939,108033176,108034239 107990064,108009887,108014588,108019666,108023563,108027760,108028069,108033292,108035149 Gene ID= ENSG00000138796.16 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr4 108047545 108168422 108047545 108168422 - ENST00000265165.5@LEF1 ENST00000265165.5 protein_coding 108167555,108165097,108163568,108089125,108083356,108081586,108079492,108078220,108070663,108064336,108063623,108047545 108168422,108165163,108163701,108089257,108083446,108081669,108079614,108078382,108070770,108064384,108063663,108048751 Gene ID= ENSG00000138795.9 TPM= 11.77 Transcript Type= protein_coding chr4 108172648 108176425 108172648 108176425 + transcript1950.chr4.nnic@LEF1-AS1 transcript1950.chr4.nnic processed_transcript 108172648,108173419,108176290 108173058,108173519,108176425 Gene ID= ENSG00000232021.6 TPM= 1.81 Transcript Type= NA chr4 108620566 108625255 108620566 108625255 + ENST00000394667.7@RPL34 ENST00000394667.7 protein_coding 108620566,108621951,108622105,108622515,108625128 108620600,108622024,108622204,108622618,108625255 Gene ID= ENSG00000109475.16 TPM= 632.22 Transcript Type= protein_coding chr4 108620590 108625255 108620590 108625255 + ENST00000394665.5@RPL34 ENST00000394665.5 protein_coding 108620590,108621951,108622105,108622515,108625128 108620712,108622024,108622204,108622618,108625255 Gene ID= ENSG00000109475.16 TPM= 78.03 Transcript Type= protein_coding chr4 108650584 108667820 108650584 108667820 + ENST00000361564.8@OSTC ENST00000361564.8 protein_coding 108650584,108655564,108657450,108667247 108650794,108655657,108657647,108667820 Gene ID= ENSG00000198856.12 TPM= 95.54 Transcript Type= protein_coding chr4 108650585 108667818 108650585 108667818 + ENST00000613215.4@OSTC ENST00000613215.4 protein_coding 108650585,108655564,108667247 108650794,108655657,108667818 Gene ID= ENSG00000198856.12 TPM= 3.17 Transcript Type= protein_coding chr4 108742040 108763053 108742040 108763053 - ENST00000296486.7@ETNPPL ENST00000296486.7 protein_coding 108762843,108760188,108759749,108756418,108754620,108752895,108750936,108749238,108748005,108746762,108746399,108743789,108742040 108763053,108760306,108759908,108756492,108754710,108753011,108751018,108749463,108748159,108746851,108746529,108743856,108742612 Gene ID= ENSG00000164089.8 TPM= 25.36 Transcript Type= protein_coding chr4 109433838 109540459 109433838 109540459 + transcript1967.chr4.nic@SEC24B transcript1967.chr4.nic protein_coding 109433838,109449417,109462901,109473004,109491327,109494615,109506328,109510009,109511957,109513747,109516528,109520366,109521117,109521420,109524818,109525346,109526226,109527322,109530289,109531385,109532639,109533593,109538493,109539561 109434002,109449509,109463644,109473186,109491407,109494856,109506512,109510111,109512083,109513856,109516640,109520484,109521172,109521626,109524941,109525504,109526399,109527432,109530464,109531522,109532743,109533685,109538596,109540459 Gene ID= ENSG00000138802.11 TPM= 9.96 Transcript Type= NA chr4 109560205 109688726 109560205 109688726 + ENST00000394650.6@MCUB ENST00000394650.6 protein_coding 109560205,109659011,109660195,109664290,109682582,109684443,109685251,109687515 109560436,109659086,109660365,109664394,109682742,109684646,109685367,109688726 Gene ID= ENSG00000005059.15 TPM= 2.72 Transcript Type= protein_coding chr4 109688742 109703473 109688742 109703473 - ENST00000265164.6@CASP6 ENST00000265164.6 protein_coding 109703356,109698300,109697622,109696410,109694525,109690850,109688742 109703473,109698342,109697768,109696486,109694700,109691009,109689568 Gene ID= ENSG00000138794.9 TPM= 4.98 Transcript Type= protein_coding chr4 109709989 109730077 109709989 109730077 - ENST00000243501.9@PLA2G12A ENST00000243501.9 protein_coding 109729602,109718683,109717548,109709989 109730077,109718759,109717713,109714495 Gene ID= ENSG00000123739.10 TPM= 50.71 Transcript Type= protein_coding chr4 109730843 109802260 109730843 109802260 - transcript1972.chr4.nnic@CFI transcript1972.chr4.nnic protein_coding 109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109734659,109730843 109802260,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109734796,109731342 Gene ID= ENSG00000205403.12 TPM= 12.22 Transcript Type= NA chr4 109730982 109802149 109730982 109802149 - transcript1974.chr4.nnic@CFI transcript1974.chr4.nnic protein_coding 109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109730982 109802149,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109731342 Gene ID= ENSG00000205403.12 TPM= 6.79 Transcript Type= NA chr4 109740694 109802179 109740694 109802179 - ENST00000394634.6@CFI ENST00000394634.6 protein_coding 109801915,109766554,109764537,109761517,109760523,109760270,109757763,109752468,109749499,109749218,109746222,109742491,109740694 109802179,109766824,109764690,109761692,109760636,109760380,109757783,109752503,109749602,109749321,109746502,109742595,109741110 Gene ID= ENSG00000205403.12 TPM= 147.76 Transcript Type= protein_coding chr4 109740696 109802051 109740696 109802051 - ENST00000394635.7@CFI ENST00000394635.7 protein_coding 109801915,109766554,109764537,109761517,109760523,109760270,109757936,109757763,109752468,109749499,109749218,109746222,109742491,109740696 109802051,109766824,109764690,109761692,109760636,109760380,109757959,109757783,109752503,109749602,109749321,109746502,109742595,109741110 Gene ID= ENSG00000205403.12 TPM= 3.32 Transcript Type= protein_coding chr4 109815510 109824740 109815510 109824740 + ENST00000394631.7@GAR1 ENST00000394631.7 protein_coding 109815510,109816153,109817936,109819001,109822347,109823965,109824418 109815545,109816378,109818090,109819060,109822488,109824033,109824740 Gene ID= ENSG00000109534.16 TPM= 4.53 Transcript Type= protein_coding chr4 109815553 109824737 109815553 109824737 + ENST00000226796.6@GAR1 ENST00000226796.6 protein_coding 109815553,109816153,109817936,109819001,109822347,109823965,109824418 109815804,109816378,109818090,109819060,109822488,109824033,109824737 Gene ID= ENSG00000109534.16 TPM= 5.43 Transcript Type= protein_coding chr4 110049387 110198676 110049387 110198676 - ENST00000302274.7@ELOVL6 ENST00000302274.7 protein_coding 110198247,110105497,110059603,110049387 110198676,110105628,110059754,110051762 Gene ID= ENSG00000170522.9 TPM= 3.62 Transcript Type= protein_coding chr4 110476073 110565285 110476073 110565285 + ENST00000265162.9@ENPEP ENST00000265162.9 protein_coding 110476073,110488541,110491033,110506637,110509653,110510245,110513415,110515377,110520008,110520215,110531198,110542751,110543015,110548176,110549346,110549528,110549716,110553315,110559647,110561406 110477058,110488682,110491164,110506757,110509807,110510358,110513549,110515442,110520073,110520366,110531277,110542887,110543070,110548326,110549419,110549632,110549886,110553455,110559725,110565285 Gene ID= ENSG00000138792.9 TPM= 12.68 Transcript Type= protein_coding chr4 112145387 112189079 112145387 112189079 + transcript1998.chr4.nnic@C4orf32 transcript1998.chr4.nnic protein_coding 112145387,112180674,112186693 112145733,112180858,112189079 Gene ID= ENSG00000174749.5 TPM= 4.53 Transcript Type= NA chr4 112231788 112270053 112231788 112270053 + transcript2002.chr4.nnic@AP1AR transcript2002.chr4.nnic protein_coding 112231788,112253208,112254747,112257772,112258333,112260766,112265009,112265734,112266588,112268144 112232174,112253236,112254773,112257797,112258479,112260862,112265067,112265807,112266716,112270053 Gene ID= ENSG00000138660.11 TPM= 1.81 Transcript Type= NA chr4 112231737 112270047 112231737 112270047 + ENST00000274000.9@AP1AR ENST00000274000.9 protein_coding 112231737,112253208,112254747,112257772,112260766,112262988,112265009,112265734,112266588,112268144 112232174,112253256,112254773,112257797,112260862,112263086,112265067,112265807,112266716,112270047 Gene ID= ENSG00000138660.11 TPM= 67.92 Transcript Type= protein_coding chr4 112274542 112285903 112274542 112285903 - ENST00000361717.3@TIFA ENST00000361717.3 protein_coding 112285640,112274542 112285903,112278434 Gene ID= ENSG00000145365.10 TPM= 7.24 Transcript Type= protein_coding chr4 112297343 112442606 112297343 112442606 + ENST00000458497.5@ALPK1 ENST00000458497.5 protein_coding 112297343,112315801,112377678,112382398,112411827,112423944,112425665,112426467,112427570,112429149,112430448,112435148,112438484,112439686,112440917,112441203 112297469,112315852,112377898,112382552,112412025,112424003,112425751,112426543,112427665,112429253,112432581,112435301,112438646,112439872,112441105,112442606 Gene ID= ENSG00000073331.17 TPM= 4.98 Transcript Type= protein_coding chr4 112297343 112441671 112297343 112441671 + transcript2014.chr4.nic@ALPK1 transcript2014.chr4.nic protein_coding 112297343,112315801,112377678,112382398,112411827,112423944,112425665,112426467,112427570,112429149,112430448,112435148,112438484,112439686,112440917 112297469,112315852,112377898,112382552,112412025,112424003,112425751,112426543,112427665,112429253,112432581,112435301,112438646,112439872,112441671 Gene ID= ENSG00000073331.17 TPM= 1.81 Transcript Type= NA chr4 112297401 112442595 112297401 112442595 + transcript2015.chr4.nic@ALPK1 transcript2015.chr4.nic protein_coding 112297401,112315801,112377678,112411827,112423944,112425665,112426467,112427570,112429149,112430448,112435148,112438484,112439686,112440917,112441203 112297469,112315852,112377898,112412025,112424003,112425751,112426543,112427665,112429253,112432581,112435301,112438646,112439872,112441105,112442595 Gene ID= ENSG00000073331.17 TPM= 3.17 Transcript Type= NA chr4 112637153 112657590 112637153 112657590 + transcript2024.chr4.nic@LARP7 transcript2024.chr4.nic protein_coding 112637153,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247 112637239,112644768,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657590 Gene ID= ENSG00000174720.15 TPM= 1.94 Transcript Type= NA chr4 112637146 112657590 112637146 112657590 + transcript2026.chr4.nic@LARP7 transcript2026.chr4.nic protein_coding 112637146,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247 112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657590 Gene ID= ENSG00000174720.15 TPM= 2.84 Transcript Type= NA chr4 112636964 112657586 112636964 112657586 + ENST00000344442.9@LARP7 ENST00000344442.9 protein_coding 112636964,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247 112637239,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586 Gene ID= ENSG00000174720.15 TPM= 24.8 Transcript Type= protein_coding chr4 112637524 112657590 112637524 112657590 + transcript2029.chr4.nic@LARP7 transcript2029.chr4.nic protein_coding 112637524,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247 112637603,112644768,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657590 Gene ID= ENSG00000174720.15 TPM= 3.38 Transcript Type= NA chr4 112637524 112657590 112637524 112657590 + transcript2030.chr4.nic@LARP7 transcript2030.chr4.nic protein_coding 112637524,112644668,112646351,112646588,112646791,112647034,112647199,112647651,112649535,112650461,112653077,112654068,112657247 112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657590 Gene ID= ENSG00000174720.15 TPM= 4.06 Transcript Type= NA chr4 112637127 112657586 112637127 112657586 + ENST00000509622.5@LARP7 ENST00000509622.5 protein_coding 112637127,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247 112637239,112644768,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657586 Gene ID= ENSG00000174720.15 TPM= 3.98 Transcript Type= nonsense_mediated_decay chr4 112637456 112657592 112637456 112657592 + ENST00000324052.10@LARP7 ENST00000324052.10 protein_coding 112637456,112644668,112646351,112646588,112646791,112647034,112647199,112647690,112649535,112650461,112653077,112654068,112657247 112637603,112644871,112646451,112646671,112646955,112647127,112647549,112647834,112649686,112650582,112653236,112654159,112657592 Gene ID= ENSG00000174720.15 TPM= 15.15 Transcript Type= protein_coding chr4 113214046 113214393 113214046 113214393 - ENST00000485827.1@AC004057.1 ENST00000485827.1 transcribed_processed_pseudogene 113214046 113214393 Gene ID= ENSG00000196656.7 TPM= 26.26 Transcript Type= transcribed_processed_pseudogene chr4 113451032 113761927 113451032 113761927 - ENST00000296402.9@CAMK2D ENST00000296402.9 protein_coding 113761004,113759320,113661713,113609152,113552031,113548657,113537341,113531216,113517563,113515069,113513830,113513328,113509638,113500463,113465529,113460147,113457291,113451032 113761927,113759414,113661772,113609206,113552096,113548729,113537443,113531299,113517657,113515191,113513913,113513370,113509675,113500511,113465604,113460241,113457563,113454515 Gene ID= ENSG00000145349.16 TPM= 9.96 Transcript Type= protein_coding chr4 118278755 118279820 118278755 118279820 + ENST00000602483.5@SNHG8 ENST00000602483.5 lincRNA 118278755,118279107,118279389,118279624 118278792,118279137,118279431,118279820 Gene ID= ENSG00000269893.6 TPM= 5.43 Transcript Type= lincRNA chr4 118278758 118279821 118278758 118279821 + ENST00000602819.5@SNHG8 ENST00000602819.5 lincRNA 118278758,118278944,118279389,118279624 118278792,118279137,118279431,118279821 Gene ID= ENSG00000269893.6 TPM= 1.36 Transcript Type= lincRNA chr4 118278709 118279823 118278709 118279823 + ENST00000602520.5@SNHG8 ENST00000602520.5 lincRNA 118278709,118279389,118279624 118278792,118279431,118279823 Gene ID= ENSG00000269893.6 TPM= 10.87 Transcript Type= lincRNA chr4 118278709 118279823 118278709 118279823 + ENST00000602414.5@SNHG8 ENST00000602414.5 lincRNA 118278709,118279389,118279624 118279137,118279431,118279823 Gene ID= ENSG00000269893.6 TPM= 30.34 Transcript Type= lincRNA chr4 118685368 118715433 118685368 118715433 + ENST00000388822.9@METTL14 ENST00000388822.9 protein_coding 118685368,118687923,118689370,118691532,118691981,118694436,118697182,118700550,118703935,118705611,118709998 118685600,118688011,118689457,118691612,118692068,118694526,118697323,118700642,118704051,118705821,118715433 Gene ID= ENSG00000145388.14 TPM= 10.87 Transcript Type= protein_coding chr4 118685381 118711445 118685381 118711445 + transcript2053.chr4.nic@METTL14 transcript2053.chr4.nic protein_coding 118685381,118687923,118689370,118691532,118691981,118694436,118697182,118700550,118703935,118709998 118685600,118688011,118689457,118691612,118692068,118694526,118697323,118700642,118704051,118711445 Gene ID= ENSG00000145388.14 TPM= 1.81 Transcript Type= NA chr4 118722823 118836138 118722823 118836138 - ENST00000280551.10@SEC24D ENST00000280551.10 protein_coding 118835941,118833579,118824620,118817264,118815451,118815028,118805843,118797683,118768173,118764802,118757721,118752697,118751996,118744944,118743988,118740941,118740663,118739149,118738261,118732733,118731316,118728561,118722823 118836138,118833737,118824749,118817412,118815726,118815155,118805954,118797810,118768311,118764917,118757845,118752888,118752089,118745060,118744158,118741037,118740808,118739287,118738379,118732912,118731507,118728650,118723655 Gene ID= ENSG00000150961.14 TPM= 38.03 Transcript Type= protein_coding chr4 118888841 119061245 118888841 119061245 + ENST00000448416.6@SYNPO2 ENST00000448416.6 protein_coding 118888841,119023430,119057401 118889141,119023581,119061245 Gene ID= ENSG00000172403.10 TPM= 4.53 Transcript Type= protein_coding chr4 119454816 119519651 119454816 119519651 + transcript2076.chr4.nnic@AC093752.1 transcript2076.chr4.nnic transcribed_unprocessed_pseudogene 119454816,119460183,119460731,119461717,119462896,119493333,119494433,119497811,119499561,119512351,119512813,119519489 119455133,119460242,119460827,119461851,119462979,119493437,119494523,119497903,119499836,119512464,119512970,119519651 Gene ID= ENSG00000245958.6 TPM= 1.81 Transcript Type= NA chr4 119454831 119500940 119454831 119500940 + transcript2078.chr4.nic@AC093752.1 transcript2078.chr4.nic transcribed_unprocessed_pseudogene 119454831,119460183,119460731,119461717,119462896,119488645,119493333,119494433,119497811,119499561 119455133,119460242,119460827,119461851,119462979,119488717,119493437,119494523,119497903,119500940 Gene ID= ENSG00000245958.6 TPM= 2.11 Transcript Type= NA chr4 119454832 119500940 119454832 119500940 + transcript2082.chr4.nic@AC093752.1 transcript2082.chr4.nic transcribed_unprocessed_pseudogene 119454832,119460183,119460731,119461717,119462896,119493333,119494433,119497662,119499561 119455133,119460242,119460827,119461851,119462979,119493437,119494523,119497903,119500940 Gene ID= ENSG00000245958.6 TPM= 2.11 Transcript Type= NA chr4 119454757 119501674 119454757 119501674 + transcript2083.chr4.nic@AC093752.1 transcript2083.chr4.nic transcribed_unprocessed_pseudogene 119454757,119460183,119460731,119461717,119462896,119493333,119494433,119497811,119499561 119455133,119460242,119460827,119461851,119462979,119493437,119494523,119497903,119501674 Gene ID= ENSG00000245958.6 TPM= 5.73 Transcript Type= NA chr4 119500818 119628765 119500818 119628765 - transcript2068.chr4.nic@PDE5A transcript2068.chr4.nic protein_coding 119628520,119606709,119596523,119567073,119565321,119562833,119560296,119553638,119552550,119542459,119538960,119525549,119520935,119519045,119511047,119507604,119505855,119504536,119502581,119500818 119628765,119607297,119596612,119567144,119565410,119562970,119560363,119553746,119552637,119542634,119539019,119525695,119521060,119519139,119511134,119507704,119505932,119504599,119502655,119501253 Gene ID= ENSG00000138735.15 TPM= 1.81 Transcript Type= NA chr4 119494395 119628991 119494395 119628991 - ENST00000354960.7@PDE5A ENST00000354960.7 protein_coding 119628520,119606709,119596523,119567073,119565321,119562833,119560296,119553638,119552550,119542459,119538960,119525549,119520935,119519045,119511047,119507604,119505855,119504536,119502581,119501170,119494395 119628991,119607297,119596612,119567144,119565410,119562970,119560363,119553746,119552637,119542634,119539019,119525695,119521060,119519139,119511134,119507704,119505932,119504599,119502655,119501253,119498738 Gene ID= ENSG00000138735.15 TPM= 3.62 Transcript Type= protein_coding chr4 120055608 120067074 120055608 120067074 - ENST00000296509.10@MAD2L1 ENST00000296509.10 protein_coding 120066662,120065672,120061975,120060874,120055608 120067074,120065818,120062095,120060977,120060290 Gene ID= ENSG00000164109.13 TPM= 2.72 Transcript Type= protein_coding chr4 120815936 120922941 120815936 120922941 - transcript2089.chr4.nic@PRDM5 transcript2089.chr4.nic protein_coding 120922516,120907474,120853418,120821171,120818353,120815936 120922941,120907557,120853540,120821345,120818527,120816924 Gene ID= ENSG00000138738.10 TPM= 2.72 Transcript Type= NA chr4 120817650 120922739 120817650 120922739 - transcript2090.chr4.nic@PRDM5 transcript2090.chr4.nic protein_coding 120922516,120907474,120853418,120821171,120817650 120922739,120907557,120853540,120821345,120818527 Gene ID= ENSG00000138738.10 TPM= 1.81 Transcript Type= NA chr4 121667955 121697113 121667955 121697113 - ENST00000296511.9@ANXA5 ENST00000296511.9 protein_coding 121696863,121696581,121686288,121684677,121683364,121681671,121678415,121677894,121672533,121671547,121669954,121669602,121667955 121697113,121696624,121686372,121684771,121683477,121681761,121678494,121677950,121672626,121671642,121670012,121669724,121668527 Gene ID= ENSG00000164111.14 TPM= 921.85 Transcript Type= protein_coding chr4 121801317 121816909 121801317 121816909 + ENST00000243498.9@EXOSC9 ENST00000243498.9 protein_coding 121801317,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816369,121816772 121801490,121801921,121802793,121803017,121804759,121807622,121810099,121811671,121813380,121814047,121816447,121816909 Gene ID= ENSG00000123737.12 TPM= 3.62 Transcript Type= protein_coding chr4 121801320 121816909 121801320 121816909 + ENST00000379663.7@EXOSC9 ENST00000379663.7 protein_coding 121801320,121801827,121802674,121802915,121804622,121807540,121809967,121811583,121813234,121813866,121816144,121816369,121816772 121801490,121801921,121802793,121803017,121804759,121807622,121810099,121811671,121813380,121814047,121816194,121816447,121816909 Gene ID= ENSG00000123737.12 TPM= 1.81 Transcript Type= protein_coding chr4 121824440 121870497 121824440 121870497 - ENST00000264499.8@BBS7 ENST00000264499.8 protein_coding 121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121828146,121824440 121870497,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269,121825993 Gene ID= ENSG00000138686.9 TPM= 4.37 Transcript Type= protein_coding chr4 121827728 121870497 121827728 121870497 - transcript2121.chr4.nnic@BBS7 transcript2121.chr4.nnic protein_coding 121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121828619,121828402,121827728 121870497,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121828657,121828505,121828269 Gene ID= ENSG00000138686.9 TPM= 2.56 Transcript Type= NA chr4 121827727 121870450 121827727 121870450 - ENST00000506636.1@BBS7 ENST00000506636.1 protein_coding 121870278,121867981,121863217,121861504,121858992,121855489,121854704,121852956,121848844,121847404,121845504,121843927,121839631,121835144,121833231,121828619,121828402,121827727 121870450,121868046,121863279,121861679,121859178,121855561,121854820,121853086,121848928,121847506,121845696,121844001,121839696,121835283,121833395,121828728,121828505,121828269 Gene ID= ENSG00000138686.9 TPM= 5.73 Transcript Type= protein_coding chr4 122152355 122235050 122152355 122235050 + transcript2124.chr4.nic@KIAA1109 transcript2124.chr4.nic protein_coding 122152355,122154025,122170615,122173036,122174574,122175850,122186036,122187431,122187895,122190000,122192229,122196635,122197196,122199359,122201009,122207110,122207541,122209159,122209818,122210887,122219340,122220333,122224498,122226707,122229121,122229931,122234773 122152584,122154112,122170744,122173152,122174652,122175914,122186222,122187512,122188088,122190079,122192379,122196791,122197274,122199450,122201126,122207265,122207638,122209337,122209924,122211095,122219567,122220470,122224677,122226835,122229240,122230211,122235050 Gene ID= ENSG00000138688.15 TPM= 2.72 Transcript Type= NA chr4 122732702 122744943 122732702 122744943 + ENST00000314218.7@BBS12 ENST00000314218.7 protein_coding 122732702,122741883 122732884,122744943 Gene ID= ENSG00000181004.9 TPM= 9.96 Transcript Type= protein_coding chr4 122892644 122922606 122892644 122922606 - ENST00000304430.9@NUDT6 ENST00000304430.9 protein_coding 122922335,122917501,122912568,122897624,122892644 122922606,122917704,122912623,122897678,122893225 Gene ID= ENSG00000170917.13 TPM= 16.3 Transcript Type= protein_coding chr4 123396756 123403761 123396756 123403761 + transcript2134.chr4.nic@SPRY1 transcript2134.chr4.nic protein_coding 123396756,123397611,123401537 123396932,123398513,123403761 Gene ID= ENSG00000164056.10 TPM= 56.6 Transcript Type= NA chr4 123396801 123403752 123396801 123403752 + ENST00000339241.1@SPRY1 ENST00000339241.1 protein_coding 123396801,123401537 123396932,123403752 Gene ID= ENSG00000164056.10 TPM= 1.36 Transcript Type= protein_coding chr4 123398386 123403760 123398386 123403760 + ENST00000622283.1@SPRY1 ENST00000622283.1 protein_coding 123398386,123401537 123398513,123403760 Gene ID= ENSG00000164056.10 TPM= 4.07 Transcript Type= protein_coding chr4 123399510 123403755 123399510 123403755 + ENST00000394339.2@SPRY1 ENST00000394339.2 protein_coding 123399510,123401537 123399794,123403755 Gene ID= ENSG00000164056.10 TPM= 2.26 Transcript Type= protein_coding chr4 123894717 123930782 123894717 123930782 + transcript2139.chr4.nnic@LINC01091 transcript2139.chr4.nnic lincRNA 123894717,123924097,123925184,123930248 123895002,123924200,123925337,123930782 Gene ID= ENSG00000249464.5 TPM= 6.57 Transcript Type= NA chr4 123894698 123930782 123894698 123930782 + transcript2142.chr4.nnic@LINC01091 transcript2142.chr4.nnic lincRNA 123894698,123925184,123930248 123894843,123925337,123930782 Gene ID= ENSG00000249464.5 TPM= 2.94 Transcript Type= NA chr4 123894703 123930782 123894703 123930782 + transcript2143.chr4.nnic@LINC01091 transcript2143.chr4.nnic lincRNA 123894703,123925184,123930248 123895002,123925337,123930782 Gene ID= ENSG00000249464.5 TPM= 9.28 Transcript Type= NA chr4 123894727 123930730 123894727 123930730 + transcript2144.chr4.nnic@LINC01091 transcript2144.chr4.nnic lincRNA 123894727,123925184,123930248 123895103,123925337,123930730 Gene ID= ENSG00000249464.5 TPM= 2.04 Transcript Type= NA chr4 127632932 127726737 127632932 127726737 + ENST00000335251.10@INTU ENST00000335251.10 protein_coding 127632932,127643521,127656636,127663381,127669036,127674124,127684409,127687678,127700010,127704228,127705591,127706487,127708571,127710913,127713936,127716325 127633180,127644056,127656721,127663584,127669154,127674213,127684486,127687867,127700063,127704290,127705812,127706969,127708668,127711102,127714093,127726737 Gene ID= ENSG00000164066.12 TPM= 1.81 Transcript Type= protein_coding chr4 127782140 127840733 127782140 127840733 + ENST00000296464.8@HSPA4L ENST00000296464.8 protein_coding 127782140,127794077,127795768,127798587,127801138,127801785,127803629,127804011,127805073,127805687,127807996,127811437,127818325,127820428,127822769,127823517,127827305,127830638,127832683 127782657,127794134,127795908,127798709,127801237,127801918,127803873,127804087,127805224,127805793,127808129,127811636,127818420,127820565,127822894,127823624,127827424,127830799,127840733 Gene ID= ENSG00000164070.11 TPM= 24.45 Transcript Type= protein_coding chr4 127917732 127965669 127917732 127965669 - ENST00000641686.1@MFSD8 ENST00000641686.1 protein_coding 127965072,127957501,127949804,127943752,127942045,127939853,127938783,127932985,127930683,127921860,127921524,127917732 127965669,127957592,127949847,127943992,127942158,127939997,127938838,127933093,127930817,127921963,127921771,127920836 Gene ID= ENSG00000164073.10 TPM= 5.43 Transcript Type= protein_coding chr4 127917806 127965375 127917806 127965375 - transcript2167.chr4.nic@MFSD8 transcript2167.chr4.nic protein_coding 127965072,127957501,127949804,127943752,127942045,127938783,127932985,127930683,127921524,127917806 127965375,127957592,127949847,127943992,127942158,127938838,127933093,127930817,127921771,127920836 Gene ID= ENSG00000164073.10 TPM= 2.72 Transcript Type= NA chr4 128061320 128211132 128061320 128211132 + transcript2172.chr4.nnic@LARP1B transcript2172.chr4.nnic protein_coding 128061320,128074460,128074934,128077788,128082165,128091001,128091347,128092777,128098186,128107139,128114570,128120470,128121826,128162194,128179406,128199439,128200521,128207256,128209856 128062219,128074518,128074993,128077962,128082305,128091144,128091512,128093031,128098330,128107313,128114742,128120612,128122188,128162317,128179512,128199599,128200665,128207383,128211132 Gene ID= ENSG00000138709.17 TPM= 1.81 Transcript Type= NA chr4 128061320 128108900 128061320 128108900 + transcript2176.chr4.nnic@LARP1B transcript2176.chr4.nnic protein_coding 128061320,128074460,128074934,128077788,128082165,128091001,128091347,128098186,128107139,128107883 128062219,128074518,128074993,128077962,128082305,128091144,128091512,128098330,128107313,128108900 Gene ID= ENSG00000138709.17 TPM= 4.53 Transcript Type= NA chr4 128428002 128519460 128428002 128519460 + transcript2184.chr4.nnic@AC108062.1 transcript2184.chr4.nnic lincRNA 128428002,128466608,128470050,128470352,128481673,128483329,128515857,128518756 128428298,128466772,128470216,128470549,128481750,128483487,128515998,128519460 Gene ID= ENSG00000251432.6 TPM= 1.81 Transcript Type= NA chr4 128428002 128471618 128428002 128471618 + transcript2185.chr4.nic@AC108062.1 transcript2185.chr4.nic lincRNA 128428002,128466608,128470050,128470352 128428298,128466772,128470216,128471618 Gene ID= ENSG00000251432.6 TPM= 1.81 Transcript Type= NA chr4 128809623 128875224 128809623 128875224 + ENST00000226319.10@JADE1 ENST00000226319.10 protein_coding 128809623,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355 128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128875224 Gene ID= ENSG00000077684.15 TPM= 44.67 Transcript Type= protein_coding chr4 128811270 128875224 128811270 128875224 + ENST00000610919.4@JADE1 ENST00000610919.4 protein_coding 128811270,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704,128867856,128871355 128811396,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128862225,128867973,128875224 Gene ID= ENSG00000077684.15 TPM= 8.45 Transcript Type= protein_coding chr4 128809703 128864081 128809703 128864081 + ENST00000511647.5@JADE1 ENST00000511647.5 protein_coding 128809703,128831733,128842953,128846375,128848980,128852057,128855630,128857338,128861704 128809877,128831810,128843038,128846532,128849167,128852268,128855797,128857454,128864081 Gene ID= ENSG00000077684.15 TPM= 28.37 Transcript Type= protein_coding chr4 129093317 129116640 129093317 129116640 + ENST00000281146.9@C4orf33 ENST00000281146.9 protein_coding 129093317,129102602,129106587,129109307,129109473,129111686 129094028,129102791,129106647,129109358,129109672,129116640 Gene ID= ENSG00000151470.12 TPM= 5.43 Transcript Type= protein_coding chr4 129096127 129112687 129096127 129112687 + ENST00000425929.5@C4orf33 ENST00000425929.5 protein_coding 129096127,129102602,129106587,129109307,129109473,129111686 129096209,129102791,129106647,129109358,129109672,129112687 Gene ID= ENSG00000151470.12 TPM= 18.11 Transcript Type= protein_coding chr4 139057863 139177238 139057863 139177238 - transcript2219.chr4.nnic@ELF2 transcript2219.chr4.nnic protein_coding 139176967,139139413,139137630,139125164,139116649,139073454,139071866,139067684,139061865,139060324,139057863 139177238,139139497,139137867,139125329,139116807,139073567,139072039,139067770,139062057,139060674,139059607 Gene ID= ENSG00000109381.19 TPM= 1.81 Transcript Type= NA chr4 139057848 139177238 139057848 139177238 - transcript2221.chr4.nic@ELF2 transcript2221.chr4.nic protein_coding 139176967,139139413,139137630,139125164,139073454,139071866,139067684,139061865,139060324,139057848 139177238,139139497,139137867,139125329,139073567,139072039,139067770,139062057,139060674,139059607 Gene ID= ENSG00000109381.19 TPM= 1.81 Transcript Type= NA chr4 139057863 139084204 139057863 139084204 - transcript2227.chr4.nic@ELF2 transcript2227.chr4.nic protein_coding 139084133,139073454,139071866,139061865,139060324,139057863 139084204,139073567,139072003,139062057,139060674,139059607 Gene ID= ENSG00000109381.19 TPM= 2.72 Transcript Type= NA chr4 139289917 139301210 139289917 139301210 - ENST00000539002.5@NDUFC1 ENST00000539002.5 protein_coding 139300602,139295732,139295043,139292530,139289917 139301210,139295960,139295146,139292609,139290092 Gene ID= ENSG00000109390.11 TPM= 118.17 Transcript Type= protein_coding chr4 139289938 139301204 139289938 139301204 - ENST00000505036.5@NDUFC1 ENST00000505036.5 protein_coding 139300964,139295732,139295043,139292530,139289938 139301204,139295960,139295146,139292609,139290092 Gene ID= ENSG00000109390.11 TPM= 110.02 Transcript Type= protein_coding chr4 139301455 139391382 139301455 139391382 + ENST00000296543.9@NAA15 ENST00000296543.9 protein_coding 139301455,139334174,139336848,139340912,139342826,139344186,139349462,139351191,139351505,139354026,139357386,139359743,139360500,139361724,139370211,139376365,139378756,139384832,139386133,139387884 139301831,139334258,139336952,139341069,139342960,139344339,139349581,139351286,139351611,139354098,139357555,139359895,139360628,139361937,139370404,139376473,139378854,139384978,139386230,139391382 Gene ID= ENSG00000164134.12 TPM= 14.49 Transcript Type= protein_coding chr4 139453807 139476609 139453807 139476609 + ENST00000305626.5@RAB33B ENST00000305626.5 protein_coding 139453807,139472686 139454444,139476609 Gene ID= ENSG00000172007.5 TPM= 11.77 Transcript Type= protein_coding chr4 139506036 139556774 139506036 139556774 - ENST00000274031.7@SETD7 ENST00000274031.7 protein_coding 139556098,139546920,139533165,139529031,139523354,139520277,139517885,139506036 139556774,139547049,139533366,139529220,139523435,139520394,139518042,139511843 Gene ID= ENSG00000145391.13 TPM= 20.83 Transcript Type= protein_coding chr4 139665768 139704253 139665768 139704253 + ENST00000265498.5@MGST2 ENST00000265498.5 protein_coding 139665768,139678543,139695197,139703455,139704016 139666077,139678642,139695267,139703536,139704253 Gene ID= ENSG00000085871.8 TPM= 48.9 Transcript Type= protein_coding chr4 139665835 139704224 139665835 139704224 + ENST00000506797.5@MGST2 ENST00000506797.5 protein_coding 139665835,139678543,139703455,139704016 139666077,139678642,139703536,139704224 Gene ID= ENSG00000085871.8 TPM= 2.72 Transcript Type= protein_coding chr4 139716753 140154184 139716753 140154184 - ENST00000509479.6@MAML3 ENST00000509479.6 protein_coding 140152860,139889357,139730416,139725751,139716753 140154184,139890967,139730667,139725835,139720323 Gene ID= ENSG00000196782.12 TPM= 5.43 Transcript Type= protein_coding chr4 140373510 140382556 140373510 140382556 + ENST00000614192.4@SCOC ENST00000614192.4 protein_coding 140373510,140379121,140379569,140380962 140373717,140379192,140379652,140382556 Gene ID= ENSG00000153130.17 TPM= 86.93 Transcript Type= protein_coding chr4 140524222 140553773 140524222 140553773 + transcript2258.chr4.nic@ELMOD2 transcript2258.chr4.nic protein_coding 140524222,140525420,140527466,140535733,140537412,140540168,140542574,140543453,140550230 140524661,140525570,140527494,140535830,140537541,140540301,140542642,140543586,140553773 Gene ID= ENSG00000179387.9 TPM= 2.72 Transcript Type= NA chr4 140524158 140553770 140524158 140553770 + ENST00000323570.7@ELMOD2 ENST00000323570.7 protein_coding 140524158,140525420,140527466,140535733,140537412,140540168,140542574,140543453,140550230 140524280,140525570,140527494,140535830,140537541,140540301,140542642,140543586,140553770 Gene ID= ENSG00000179387.9 TPM= 37.13 Transcript Type= protein_coding chr4 140865570 141132838 140865570 141132838 - transcript2262.chr4.nnic@RNF150 transcript2262.chr4.nnic protein_coding 141132325,141053666,140967623,140949301,140947654,140925977,140911144,140865570 141132838,141053731,140967873,140949372,140947736,140926073,140911354,140868379 Gene ID= ENSG00000170153.10 TPM= 9.51 Transcript Type= NA chr4 140865570 141132812 140865570 141132812 - transcript2264.chr4.nnic@RNF150 transcript2264.chr4.nnic protein_coding 141132325,140967623,140949301,140947654,140911144,140865570 141132812,140967873,140949372,140947736,140911354,140868379 Gene ID= ENSG00000170153.10 TPM= 4.07 Transcript Type= NA chr4 141220887 141234697 141220887 141234697 + ENST00000262990.8@ZNF330 ENST00000262990.8 protein_coding 141220887,141222366,141224487,141224607,141226767,141229571,141230166,141231439,141232525,141233715 141221108,141222491,141224506,141224677,141226846,141229697,141230270,141231485,141232642,141234697 Gene ID= ENSG00000109445.10 TPM= 47.09 Transcript Type= protein_coding chr4 142028726 142405483 142028726 142405483 - transcript2274.chr4.nic@INPP4B transcript2274.chr4.nic protein_coding 142405206,142402938,142314712,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028726 142405483,142403054,142314762,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914 Gene ID= ENSG00000109452.12 TPM= 2.72 Transcript Type= NA chr4 142028726 142305944 142028726 142305944 - transcript2276.chr4.nic@INPP4B transcript2276.chr4.nic protein_coding 142305877,142305458,142270663,142260492,142237864,142208896,142208425,142193087,142173632,142160358,142145840,142124588,142123292,142122128,142112542,142108093,142086144,142082031,142028726 142305944,142305537,142270774,142260564,142238011,142209026,142208529,142193195,142173809,142160561,142145996,142124760,142123415,142122245,142112682,142108190,142086256,142082185,142028914 Gene ID= ENSG00000109452.12 TPM= 1.81 Transcript Type= NA chr4 144646021 144745271 144646021 144745271 + ENST00000296575.7@HHIP ENST00000296575.7 protein_coding 144646021,144652605,144658790,144659637,144706531,144707087,144708168,144711950,144714225,144715300,144718875,144734741,144737764 144646954,144652797,144658946,144659838,144706682,144707260,144708311,144712071,144714348,144715430,144718956,144734889,144745271 Gene ID= ENSG00000164161.9 TPM= 7.24 Transcript Type= protein_coding chr4 144995158 145098213 144995158 145098213 - ENST00000309439.9@ANAPC10 ENST00000309439.9 protein_coding 145098131,145095985,145081660,145064572,144995158 145098213,145096111,145081750,145064692,144995603 Gene ID= ENSG00000164162.13 TPM= 3.62 Transcript Type= protein_coding chr4 144995196 145098191 144995196 145098191 - ENST00000511466.5@ANAPC10 ENST00000511466.5 protein_coding 145098131,145095985,145081660,144995196 145098191,145096111,145081750,144995603 Gene ID= ENSG00000164162.13 TPM= 1.81 Transcript Type= processed_transcript chr4 145097932 145129179 145097932 145129179 + ENST00000296577.8@ABCE1 ENST00000296577.8 protein_coding 145097932,145104386,145105605,145108015,145109132,145110103,145110375,145110968,145112239,145117293,145119932,145121174,145121333,145123021,145123215,145123478,145124990,145127526 145098419,145104515,145105690,145108112,145109249,145110240,145110444,145111064,145112328,145117414,145120153,145121233,145121391,145123131,145123357,145123600,145125101,145129179 Gene ID= ENSG00000164163.10 TPM= 36.22 Transcript Type= protein_coding chr4 145159138 145180589 145159138 145180589 - transcript2302.chr4.nic@OTUD4 transcript2302.chr4.nic protein_coding 145179815,145174661,145171670,145165151,145164154,145162640,145159138 145180589,145174744,145171720,145165197,145164226,145162721,145159635 Gene ID= ENSG00000164164.15 TPM= 3.62 Transcript Type= NA chr4 145481792 145558079 145481792 145558079 + ENST00000302085.8@SMAD1 ENST00000302085.8 protein_coding 145481792,145514438,145539804,145542582,145546703,145553784,145557791 145482038,145515013,145540061,145542698,145546924,145554040,145558079 Gene ID= ENSG00000170365.9 TPM= 3.62 Transcript Type= protein_coding chr4 145618263 145660035 145618263 145660035 + ENST00000281317.9@MMAA ENST00000281317.9 protein_coding 145618263,145639075,145642363,145645986,145651062,145653994,145655147 145619407,145639578,145642485,145646156,145651147,145654143,145660035 Gene ID= ENSG00000151611.13 TPM= 12.68 Transcript Type= protein_coding chr4 145760738 145938471 145760738 145938471 - ENST00000379448.8@ZNF827 ENST00000379448.8 protein_coding 145938365,145902166,145892243,145885678,145870245,145849322,145845956,145823422,145779374,145775789,145774506,145765547,145764979,145763090,145760738 145938471,145903215,145892415,145886158,145870478,145849561,145846013,145823525,145779511,145775960,145774672,145765738,145765165,145763122,145761598 Gene ID= ENSG00000151612.15 TPM= 1.81 Transcript Type= protein_coding chr4 146175685 146191535 146175685 146191535 + ENST00000296581.10@LSM6 ENST00000296581.10 protein_coding 146175685,146182912,146187274,146189622 146175811,146183015,146187387,146191535 Gene ID= ENSG00000164167.10 TPM= 28.07 Transcript Type= protein_coding chr4 147635652 147684163 147635652 147684163 - transcript2318.chr4.nnic@PRMT9 transcript2318.chr4.nnic protein_coding 147683799,147680323,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147635652 147684163,147680471,147673874,147673126,147670708,147668645,147661038,147657975,147654566,147642940,147639082,147638747 Gene ID= ENSG00000164169.12 TPM= 6.18 Transcript Type= NA chr4 147637459 147684163 147637459 147684163 - transcript2320.chr4.nnic@PRMT9 transcript2320.chr4.nnic protein_coding 147683799,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147637459 147684163,147673874,147673126,147670708,147668645,147661038,147657975,147654566,147642940,147639082,147638747 Gene ID= ENSG00000164169.12 TPM= 2.56 Transcript Type= NA chr4 147637459 147684163 147637459 147684163 - transcript2322.chr4.nic@PRMT9 transcript2322.chr4.nic protein_coding 147683799,147680323,147673638,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147637459 147684163,147680471,147673874,147673126,147668645,147661038,147657975,147654566,147642940,147639082,147638747 Gene ID= ENSG00000164169.12 TPM= 2.56 Transcript Type= NA chr4 147638385 147684125 147638385 147684125 - ENST00000514886.1@PRMT9 ENST00000514886.1 protein_coding 147683799,147673638,147672959,147670641,147668539,147660846,147657792,147653852,147642787,147638960,147638385 147684125,147673874,147673126,147670743,147668645,147661038,147657975,147654566,147642940,147639082,147638747 Gene ID= ENSG00000164169.12 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr4 147731922 148072780 147731922 148072780 + transcript2333.chr4.nic@ARHGAP10 transcript2333.chr4.nic protein_coding 147731922,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148064416,148071993 147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148064507,148072780 Gene ID= ENSG00000071205.11 TPM= 5.89 Transcript Type= NA chr4 147732063 148072780 147732063 148072780 + ENST00000336498.7@ARHGAP10 ENST00000336498.7 protein_coding 147732063,147822727,147822896,147847151,147857553,147864846,147866712,147875021,147879232,147881838,147906638,147909732,147913074,147939825,147946617,147955316,147965024,147966680,148023263,148046892,148063148,148064416,148071993 147732455,147822822,147822957,147847222,147857654,147864956,147866816,147875150,147879338,147881932,147906719,147909777,147913139,147939899,147946704,147955374,147965129,147966839,148023413,148047051,148063300,148064507,148072780 Gene ID= ENSG00000071205.11 TPM= 22.19 Transcript Type= protein_coding chr4 148078765 148442520 148078765 148442520 - ENST00000625323.2@NR3C2 ENST00000625323.2 protein_coding 148442160,148435104,148259966,148194746,148154551,148152469,148120158,148114104,148078765 148442520,148436862,148260117,148194862,148154901,148152613,148120288,148114261,148081499 Gene ID= ENSG00000151623.14 TPM= 1.36 Transcript Type= protein_coding chr4 148078769 148442520 148078769 148442520 - ENST00000358102.7@NR3C2 ENST00000358102.7 protein_coding 148442160,148435104,148259978,148194746,148154551,148152469,148120158,148114104,148078769 148442520,148436862,148260117,148194862,148154901,148152613,148120288,148114261,148081499 Gene ID= ENSG00000151623.14 TPM= 3.17 Transcript Type= protein_coding chr4 148442690 148489204 148442690 148489204 + transcript2341.chr4.nnic@NA transcript2341.chr4.nnic NA 148442690,148463841,148485226 148442960,148463998,148489204 Gene ID= novel_gene_chr4_2342 TPM= 3.62 Transcript Type= NA chr4 151099573 151104652 151099573 151104652 + ENST00000274065.8@RPS3A ENST00000274065.8 protein_coding 151099573,151100485,151100975,151102871,151104177,151104472 151099714,151100588,151101162,151103079,151104286,151104652 Gene ID= ENSG00000145425.9 TPM= 926.83 Transcript Type= protein_coding chr4 151099624 151104637 151099624 151104637 + ENST00000509736.5@RPS3A ENST00000509736.5 protein_coding 151099624,151102871,151104177,151104472 151099714,151103079,151104286,151104637 Gene ID= ENSG00000145425.9 TPM= 27.17 Transcript Type= protein_coding chr4 151120280 151325668 151120280 151325668 - transcript2367.chr4.nic@SH3D19 transcript2367.chr4.nic protein_coding 151325241,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151144220,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120280 151325668,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144288,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207 Gene ID= ENSG00000109686.17 TPM= 5.43 Transcript Type= NA chr4 151120279 151226598 151120279 151226598 - ENST00000409598.8@SH3D19 ENST00000409598.8 protein_coding 151226168,151226047,151187423,151179355,151176817,151176525,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120279 151226598,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207 Gene ID= ENSG00000109686.17 TPM= 4.98 Transcript Type= protein_coding chr4 151120287 151325632 151120287 151325632 - ENST00000604030.6@SH3D19 ENST00000604030.6 protein_coding 151325241,151226047,151187423,151179355,151176817,151176534,151174670,151165589,151159240,151149500,151147922,151143910,151139775,151137732,151135074,151133034,151132331,151128170,151127618,151120287 151325632,151226086,151187463,151179397,151176955,151176687,151175674,151165696,151159352,151149561,151148186,151144050,151139847,151137862,151135132,151133236,151132383,151128356,151127715,151122207 Gene ID= ENSG00000109686.17 TPM= 6.79 Transcript Type= protein_coding chr4 151409146 151663634 151409146 151663634 + transcript2376.chr4.nic@FAM160A1 transcript2376.chr4.nic protein_coding 151409146,151454701,151566138,151577450,151586641,151588840,151629702,151638677,151646558,151649459,151656232,151656760,151662501 151409465,151454808,151566364,151578076,151586799,151588926,151629869,151638756,151646748,151650592,151656410,151656898,151663634 Gene ID= ENSG00000164142.15 TPM= 2.72 Transcript Type= NA chr4 151670850 151761025 151670850 151761025 - transcript2380.chr4.nnic@GATB transcript2380.chr4.nnic protein_coding 151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703851,151701329,151688630,151679813,151670850 151761025,151758922,151719538,151717074,151716131,151708101,151705269,151703895,151701518,151688763,151679891,151671302 Gene ID= ENSG00000059691.11 TPM= 2.26 Transcript Type= NA chr4 151670504 151761023 151670504 151761023 - ENST00000263985.10@GATB ENST00000263985.10 protein_coding 151760807,151758772,151719425,151716876,151716009,151707988,151705185,151703851,151701329,151688630,151679813,151672762,151670504 151761023,151758922,151719538,151717074,151716131,151708101,151705269,151703895,151701518,151688763,151679891,151672896,151671302 Gene ID= ENSG00000059691.11 TPM= 53.88 Transcript Type= protein_coding chr4 152321263 152352971 152321263 152352971 - ENST00000263981.9@FBXW7 ENST00000263981.9 protein_coding 152352470,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321263 152352971,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149 Gene ID= ENSG00000109670.13 TPM= 8.6 Transcript Type= protein_coding chr4 152321259 152536101 152321259 152536101 - ENST00000281708.8@FBXW7 ENST00000281708.8 protein_coding 152534941,152411303,152350042,152346930,152337802,152332596,152330732,152329672,152328208,152326006,152324184,152321259 152536101,152411872,152350124,152347071,152337936,152332719,152330868,152329785,152328389,152326231,152324394,152323149 Gene ID= ENSG00000109670.13 TPM= 4.07 Transcript Type= protein_coding chr4 152779937 152912357 152779937 152912357 + ENST00000451320.6@ARFIP1 ENST00000451320.6 protein_coding 152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064 152780091,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152912357 Gene ID= ENSG00000164144.15 TPM= 11.32 Transcript Type= protein_coding chr4 152779937 152911909 152779937 152911909 + ENST00000353617.6@ARFIP1 ENST00000353617.6 protein_coding 152779937,152829625,152863606,152870753,152872452,152880963,152882723,152888133,152910064 152780226,152829726,152863714,152870848,152872564,152881184,152882880,152888307,152911909 Gene ID= ENSG00000164144.15 TPM= 22.19 Transcript Type= protein_coding chr4 153222484 153339316 153222484 153339316 + transcript2406.chr4.nic@TRIM2 transcript2406.chr4.nic protein_coding 153222484,153270335,153275893,153292982,153294305,153295313,153315485,153315832,153322648,153324078,153328530,153334814 153223039,153270519,153276130,153293133,153294485,153296036,153315588,153315999,153322816,153324148,153328670,153339316 Gene ID= ENSG00000109654.14 TPM= 9.96 Transcript Type= NA chr4 153466346 153636711 153466346 153636711 + ENST00000409663.7@TMEM131L ENST00000409663.7 protein_coding 153466346,153467211,153473845,153550073,153555787,153556966,153558258,153580826,153581407,153583190,153583564,153584838,153585458,153586209,153587742,153588890,153591053,153592475,153593799,153596258,153598590,153602152,153602542,153603303,153603802,153612252,153620756,153621683,153622898,153626147,153627605,153632718,153634192,153635432,153636301 153466521,153467281,153473888,153550141,153555910,153557082,153558368,153580903,153581560,153583248,153583672,153584931,153585611,153586379,153587811,153589007,153591194,153592584,153593871,153596385,153598732,153602338,153602727,153603452,153604430,153612400,153620880,153621849,153623083,153626225,153627687,153632838,153634280,153635571,153636711 Gene ID= ENSG00000121210.15 TPM= 1.36 Transcript Type= protein_coding chr4 153466349 153636711 153466349 153636711 + ENST00000409959.7@TMEM131L ENST00000409959.7 protein_coding 153466349,153467211,153473845,153550073,153555787,153556966,153558258,153580826,153581407,153583190,153583564,153584835,153585458,153586209,153587742,153588890,153591053,153592475,153593799,153596258,153598590,153602152,153602542,153603303,153603802,153612252,153620756,153621683,153622898,153626147,153627605,153632718,153634192,153635432,153636301 153466521,153467281,153473888,153550141,153555910,153557082,153558368,153580903,153581560,153583248,153583672,153584931,153585611,153586379,153587811,153589007,153591194,153592584,153593871,153596385,153598732,153602338,153602727,153603452,153604430,153612400,153620880,153621849,153623083,153626225,153627687,153632838,153634280,153635571,153636711 Gene ID= ENSG00000121210.15 TPM= 1.36 Transcript Type= protein_coding chr4 153684259 153705695 153684259 153705695 + transcript2415.chr4.nnic@TLR2 transcript2415.chr4.nnic protein_coding 153684259,153687902,153702892 153684360,153688047,153705695 Gene ID= ENSG00000137462.6 TPM= 6.79 Transcript Type= NA chr4 153684259 153705442 153684259 153705442 + transcript2416.chr4.nnic@TLR2 transcript2416.chr4.nnic protein_coding 153684259,153687936,153702892 153684360,153688047,153705442 Gene ID= ENSG00000137462.6 TPM= 2.26 Transcript Type= NA chr4 153780592 153789120 153780592 153789120 - ENST00000274063.4@SFRP2 ENST00000274063.4 protein_coding 153788334,153785864,153780592 153789120,153785944,153781755 Gene ID= ENSG00000145423.4 TPM= 8.15 Transcript Type= protein_coding chr4 154535006 154550435 154535006 154550435 - ENST00000499023.6@PLRG1 ENST00000499023.6 protein_coding 154550300,154548829,154547711,154547011,154546123,154545836,154544445,154542187,154540785,154540594,154539951,154539105,154537969,154537286,154535006 154550435,154548935,154547853,154547064,154546213,154545923,154544546,154542279,154540934,154540695,154540053,154539213,154538108,154537479,154536744 Gene ID= ENSG00000171566.11 TPM= 43.92 Transcript Type= protein_coding chr4 154536511 154550435 154536511 154550435 - transcript2427.chr4.nic@PLRG1 transcript2427.chr4.nic protein_coding 154550300,154548829,154547711,154545836,154544445,154540785,154540594,154539951,154539105,154537969,154537286,154536511 154550435,154548935,154547853,154547064,154544546,154542279,154540695,154540053,154539213,154538108,154537479,154536744 Gene ID= ENSG00000171566.11 TPM= 2.26 Transcript Type= NA chr4 154604576 154612648 154604576 154612648 - ENST00000336098.7@FGG ENST00000336098.7 protein_coding 154612532,154612391,154612018,154611805,154610067,154609630,154608466,154606705,154604576 154612648,154612435,154612201,154611898,154610197,154609763,154608650,154606982,154605066 Gene ID= ENSG00000171557.16 TPM= 3.62 Transcript Type= protein_coding chr4 155342658 155376970 155342658 155376970 - ENST00000311277.8@MAP9 ENST00000311277.8 protein_coding 155376771,155375776,155374937,155373136,155368586,155362048,155360168,155357449,155355716,155355071,155353179,155352912,155352596,155342658 155376970,155375914,155375021,155373456,155368812,155362141,155360415,155357519,155355884,155355160,155353340,155353057,155352728,155347905 Gene ID= ENSG00000164114.18 TPM= 4.53 Transcript Type= protein_coding chr4 155667668 155732324 155667668 155732324 + transcript2432.chr4.nnic@GUCY1A3 transcript2432.chr4.nnic protein_coding 155667668,155696806,155703932,155708236,155710542,155713098,155717159,155722038,155730030 155667932,155697122,155703993,155708294,155711251,155713583,155717302,155722192,155732324 Gene ID= ENSG00000164116.16 TPM= 1.81 Transcript Type= NA chr4 155759059 155807591 155759059 155807591 + ENST00000264424.12@GUCY1B3 ENST00000264424.12 protein_coding 155759059,155759787,155774968,155777524,155789714,155793856,155795341,155796377,155799877,155802342,155803624,155804593,155805103,155806386 155759143,155759860,155775068,155777642,155789911,155794086,155795457,155796510,155800074,155802579,155803764,155804747,155805229,155807591 Gene ID= ENSG00000061918.12 TPM= 2.72 Transcript Type= protein_coding chr4 155903695 155920406 155903695 155920406 + ENST00000536354.2@TDO2 ENST00000536354.2 protein_coding 155903695,155904018,155905067,155907722,155908887,155910025,155911497,155914323,155915855,155917395,155918149,155919837 155903793,155904123,155905157,155907792,155909014,155910211,155911604,155914434,155915912,155917474,155918239,155920406 Gene ID= ENSG00000151790.8 TPM= 1.81 Transcript Type= protein_coding chr4 155924118 155953917 155924118 155953917 - ENST00000433477.3@CTSO ENST00000433477.3 protein_coding 155953713,155943156,155942317,155939371,155937362,155929542,155928336,155924118 155953917,155943264,155942456,155939538,155937483,155929705,155928428,155926070 Gene ID= ENSG00000256043.2 TPM= 77.88 Transcript Type= protein_coding chr4 156761612 156971806 156761612 156971806 - transcript2447.chr4.nnic@PDGFC transcript2447.chr4.nnic protein_coding 156970786,156967571,156850221,156810837,156772686,156767773,156761612 156971806,156967745,156850416,156811017,156772893,156767990,156763206 Gene ID= ENSG00000145431.10 TPM= 2.72 Transcript Type= NA chr4 156761612 156971822 156761612 156971822 - transcript2448.chr4.nnic@PDGFC transcript2448.chr4.nnic protein_coding 156971767,156970786,156850221,156810837,156772686,156767773,156761612 156971822,156971019,156850416,156811017,156772893,156767990,156763206 Gene ID= ENSG00000145431.10 TPM= 6.34 Transcript Type= NA chr4 157076125 157172090 157076125 157172090 + ENST00000541722.5@GLRB ENST00000541722.5 protein_coding 157076125,157077996,157120556,157122330,157136469,157136804,157138809,157143807,157170432 157076297,157078146,157120662,157122397,157136698,157136886,157138949,157143959,157172090 Gene ID= ENSG00000109738.10 TPM= 5.43 Transcript Type= protein_coding chr4 158124580 158173050 158124580 158173050 - transcript2473.chr4.nic@FAM198B transcript2473.chr4.nic protein_coding 158172868,158155611,158130786,158124580 158173050,158155825,158131012,158127614 Gene ID= ENSG00000164125.15 TPM= 17.39 Transcript Type= NA chr4 158124474 158173050 158124474 158173050 - ENST00000585682.5@FAM198B ENST00000585682.5 protein_coding 158172868,158170466,158155611,158130786,158124474 158173050,158171599,158155825,158131012,158127614 Gene ID= ENSG00000164125.15 TPM= 408.28 Transcript Type= protein_coding chr4 158124604 158172736 158124604 158172736 - ENST00000296530.12@FAM198B ENST00000296530.12 protein_coding 158172339,158170466,158155611,158130786,158124604 158172736,158171599,158155825,158131012,158127614 Gene ID= ENSG00000164125.15 TPM= 132.09 Transcript Type= protein_coding chr4 158521726 158653372 158521726 158653372 + ENST00000307765.9@RXFP1 ENST00000307765.9 protein_coding 158521726,158572698,158593401,158599326,158605068,158607972,158612130,158612291,158617131,158626820,158628638,158633405,158638008,158639260,158644909,158646791,158648499,158651757 158522025,158572835,158593499,158599431,158605139,158608043,158612201,158612362,158617205,158626891,158628709,158633476,158638079,158639331,158645138,158647201,158648717,158653372 Gene ID= ENSG00000171509.15 TPM= 5.43 Transcript Type= protein_coding chr4 158666679 158672046 158666679 158672046 - ENST00000379205.4@C4orf46 ENST00000379205.4 protein_coding 158671616,158666679 158672046,158669768 Gene ID= ENSG00000205208.4 TPM= 4.53 Transcript Type= protein_coding chr4 158709127 158723417 158709127 158723417 - transcript2489.chr4.nic@PPID transcript2489.chr4.nic protein_coding 158723204,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709127 158723417,158721483,158719286,158717200,158715668,158715403,158713260,158710848,158710670,158709824 Gene ID= ENSG00000171497.4 TPM= 1.81 Transcript Type= NA chr4 158709127 158723418 158709127 158723418 - transcript2492.chr4.nnic@PPID transcript2492.chr4.nnic protein_coding 158723329,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709127 158723418,158721483,158719286,158717200,158715684,158715403,158713260,158710848,158710670,158709824 Gene ID= ENSG00000171497.4 TPM= 1.81 Transcript Type= NA chr4 158709134 158723396 158709134 158723396 - ENST00000307720.3@PPID ENST00000307720.3 protein_coding 158723204,158721343,158719180,158717012,158715562,158715297,158713119,158710762,158710628,158709134 158723396,158721483,158719286,158717200,158715684,158715403,158713260,158710848,158710670,158709824 Gene ID= ENSG00000171497.4 TPM= 40.75 Transcript Type= protein_coding chr4 158769030 158908048 158769030 158908048 + transcript2495.chr4.nic@FNIP2 transcript2495.chr4.nic protein_coding 158769030,158825916,158829079,158831861,158832067,158833528,158833801,158835405,158851321,158859057,158859578,158861342,158861607,158868102,158870313,158891446,158895750,158904466 158769319,158826042,158829225,158831961,158832138,158833628,158833890,158835476,158851450,158859258,158859666,158861488,158861776,158869428,158870469,158891646,158895865,158908048 Gene ID= ENSG00000052795.12 TPM= 3.62 Transcript Type= NA chr4 163323961 163332862 163323961 163332862 - ENST00000296533.2@NPY1R ENST00000296533.2 protein_coding 163332482,163325856,163323961 163332862,163326705,163325758 Gene ID= ENSG00000164128.6 TPM= 17.21 Transcript Type= protein_coding chr4 163323963 163344867 163323963 163344867 - transcript2512.chr4.nic@NPY1R transcript2512.chr4.nic protein_coding 163344305,163325856,163323963 163344867,163326705,163325758 Gene ID= ENSG00000164128.6 TPM= 7.24 Transcript Type= NA chr4 163494461 163520539 163494461 163520539 + ENST00000358572.9@TMA16 ENST00000358572.9 protein_coding 163494461,163507033,163512822,163514074,163515313,163517434,163519334 163494804,163507145,163512859,163514158,163515461,163517476,163520539 Gene ID= ENSG00000198498.9 TPM= 10.87 Transcript Type= protein_coding chr4 163527121 163613534 163527121 163613534 - ENST00000339875.9@MARCH1 ENST00000339875.9 protein_coding 163613314,163585749,163545596,163527121 163613534,163585929,163545743,163529046 Gene ID= ENSG00000145416.13 TPM= 5.43 Transcript Type= protein_coding chr4 164968282 164977649 164968282 164977649 - transcript2519.chr4.nic@TRIM61 transcript2519.chr4.nic protein_coding 164977531,164976688,164968282 164977649,164976825,164970339 Gene ID= ENSG00000183439.7 TPM= 1.81 Transcript Type= NA chr4 165070608 165112919 165070608 165112919 - ENST00000306480.10@TMEM192 ENST00000306480.10 protein_coding 165112747,165102950,165100628,165088468,165085586,165070608 165112919,165103096,165100892,165088602,165085688,165079796 Gene ID= ENSG00000170088.13 TPM= 25.36 Transcript Type= protein_coding chr4 165207600 165323155 165207600 165323155 + transcript2523.chr4.nic@KLHL2 transcript2523.chr4.nic protein_coding 165207600,165219934,165223938,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032 165207902,165220059,165224057,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323155 Gene ID= ENSG00000109466.13 TPM= 4.83 Transcript Type= NA chr4 165207600 165323155 165207600 165323155 + transcript2528.chr4.nic@KLHL2 transcript2528.chr4.nic protein_coding 165207600,165219934,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032 165207902,165220059,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323155 Gene ID= ENSG00000109466.13 TPM= 3.92 Transcript Type= NA chr4 165207618 165323153 165207618 165323153 + ENST00000226725.10@KLHL2 ENST00000226725.10 protein_coding 165207618,165219934,165228807,165238778,165263197,165294359,165297609,165299507,165305608,165310553,165311464,165313238,165314026,165317826,165322032 165207902,165220059,165228913,165238899,165263359,165294468,165297725,165299656,165305725,165310750,165311565,165313366,165314166,165317969,165323153 Gene ID= ENSG00000109466.13 TPM= 29.28 Transcript Type= protein_coding chr4 165327741 165343069 165327741 165343069 + transcript2532.chr4.nic@MSMO1 transcript2532.chr4.nic protein_coding 165327741,165333340,165337789,165338652,165340221,165341751 165327946,165333625,165337937,165338778,165340375,165343069 Gene ID= ENSG00000052802.12 TPM= 2.72 Transcript Type= NA chr4 165327623 165343160 165327623 165343160 + ENST00000261507.10@MSMO1 ENST00000261507.10 protein_coding 165327623,165333340,165337789,165338652,165340221,165341751 165327764,165333625,165337937,165338778,165340375,165343160 Gene ID= ENSG00000052802.12 TPM= 94.18 Transcript Type= protein_coding chr4 165327686 165343029 165327686 165343029 + ENST00000393766.6@MSMO1 ENST00000393766.6 protein_coding 165327686,165337789,165338652,165340221,165341751 165327764,165337937,165338778,165340375,165343029 Gene ID= ENSG00000052802.12 TPM= 4.53 Transcript Type= protein_coding chr4 165378942 165498320 165378942 165498320 + ENST00000402744.8@CPE ENST00000402744.8 protein_coding 165378942,165464390,165467688,165482242,165484422,165487438,165493171,165495559,165497512 165379528,165464586,165467855,165482359,165484604,165487577,165493270,165495677,165498320 Gene ID= ENSG00000109472.13 TPM= 207.37 Transcript Type= protein_coding chr4 168216293 168318807 168216293 168318807 - ENST00000393743.7@DDX60 ENST00000393743.7 protein_coding 168318622,168311256,168310998,168308006,168306379,168302300,168293787,168291748,168288174,168287048,168285393,168284820,168283446,168280335,168276015,168275345,168273934,168273279,168272043,168268854,168267841,168267582,168262683,168262000,168260865,168255711,168252509,168250954,168248188,168246418,168237691,168237286,168236252,168225529,168224243,168221730,168220655,168216293 168318807,168311365,168311067,168308195,168306720,168302416,168293945,168291906,168288315,168287203,168285498,168284935,168283606,168280590,168276181,168275503,168274083,168273398,168272138,168268969,168267983,168267691,168262787,168262128,168260989,168255869,168252656,168251106,168248292,168246618,168237795,168237427,168236373,168225676,168224385,168221881,168220717,168217032 Gene ID= ENSG00000137628.16 TPM= 1.81 Transcript Type= protein_coding chr4 168832034 168928456 168832034 168928456 + transcript2545.chr4.nic@PALLD transcript2545.chr4.nic protein_coding 168832034,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168926213 168832171,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168928456 Gene ID= ENSG00000129116.17 TPM= 23.84 Transcript Type= NA chr4 168832095 168928456 168832095 168928456 + transcript2548.chr4.nnic@PALLD transcript2548.chr4.nnic protein_coding 168832095,168877723,168890922,168903757,168913927,168915895,168921534,168924255,168924945,168926213 168832171,168878394,168891057,168903906,168914021,168916027,168921741,168924420,168925078,168928456 Gene ID= ENSG00000129116.17 TPM= 7.54 Transcript Type= NA chr4 168832041 168928445 168832041 168928445 + ENST00000507735.5@PALLD ENST00000507735.5 protein_coding 168832041,168877723,168890922,168894579,168898493,168903757,168913927,168915895,168921534,168924255,168924945,168926213 168832171,168878394,168891057,168894677,168898714,168903906,168914021,168916027,168921741,168924420,168925078,168928445 Gene ID= ENSG00000129116.17 TPM= 139.75 Transcript Type= protein_coding chr4 168863650 169010254 168863650 169010254 - transcript2551.chr4.nic@CBR4 transcript2551.chr4.nic protein_coding 169009948,169007636,169006755,169002071,168894570,168864372,168863650 169010254,169007756,169006891,169002205,168894765,168864586,168863973 Gene ID= ENSG00000145439.11 TPM= 1.81 Transcript Type= NA chr4 168987593 169010317 168987593 169010317 - transcript2552.chr4.nic@CBR4 transcript2552.chr4.nic protein_coding 169009948,169007636,169006755,169005885,169002071,168987593 169010317,169007756,169006891,169005914,169002205,168990328 Gene ID= ENSG00000145439.11 TPM= 2.72 Transcript Type= NA chr4 168987594 169010317 168987594 169010317 - transcript2553.chr4.nnic@CBR4 transcript2553.chr4.nnic protein_coding 169009948,169007636,169006755,169002071,168998202,168987594 169010317,169007756,169006891,169002205,168998285,168990328 Gene ID= ENSG00000145439.11 TPM= 7.24 Transcript Type= NA chr4 168987590 169010258 168987590 169010258 - ENST00000306193.7@CBR4 ENST00000306193.7 protein_coding 169009948,169007636,169006755,169002071,168987590 169010258,169007756,169006891,169002205,168990328 Gene ID= ENSG00000145439.11 TPM= 20.83 Transcript Type= protein_coding chr4 169094256 169271105 169094256 169271105 - ENST00000284637.13@SH3RF1 ENST00000284637.13 protein_coding 169270859,169268820,169156404,169155480,169136318,169130046,169122100,169120819,169117523,169116269,169106847,169094256 169271105,169269307,169156679,169155575,169136620,169130156,169122266,169120989,169117782,169116630,169107205,169096687 Gene ID= ENSG00000154447.14 TPM= 8.15 Transcript Type= protein_coding chr4 169393271 169612621 169393271 169612621 - transcript2559.chr4.nic@NEK1 transcript2559.chr4.nic protein_coding 169612222,169612020,169602514,169602008,169599100,169590726,169589447,169588649,169587559,169585349,169580842,169576928,169562137,169561832,169561687,169561480,169555932,169537809,169508248,169507715,169507037,169479403,169477432,169477124,169463243,169438083,169433545,169426146,169424553,169406596,169401652,169400521,169400225,169393271 169612621,169612143,169602678,169602104,169599197,169590809,169589514,169588735,169587613,169585549,169580902,169577079,169562196,169561891,169561737,169561554,169556095,169537911,169508331,169507792,169507132,169479534,169477497,169477352,169463395,169438259,169433665,169426234,169424800,169406747,169401860,169400651,169400357,169394523 Gene ID= ENSG00000137601.16 TPM= 2.26 Transcript Type= NA chr4 169393281 169612627 169393281 169612627 - ENST00000511633.5@NEK1 ENST00000511633.5 protein_coding 169612222,169612020,169602514,169602008,169599100,169590726,169589447,169588649,169587559,169585349,169580842,169576928,169562137,169561832,169561687,169561480,169555932,169537809,169508769,169508248,169507715,169507037,169479403,169477432,169477124,169463243,169438083,169433545,169426146,169424553,169406596,169401652,169400521,169400225,169393281 169612627,169612143,169602678,169602104,169599197,169590809,169589514,169588735,169587613,169585549,169580902,169577079,169562196,169561891,169561737,169561554,169556095,169537911,169508852,169508331,169507792,169507132,169479534,169477497,169477352,169463395,169438259,169433665,169426234,169424800,169406747,169401860,169400651,169400357,169394523 Gene ID= ENSG00000137601.16 TPM= 3.17 Transcript Type= protein_coding chr4 169620521 169723673 169620521 169723673 + ENST00000513761.5@CLCN3 ENST00000513761.5 protein_coding 169620521,169635913,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907 169621063,169636088,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723673 Gene ID= ENSG00000109572.13 TPM= 43.47 Transcript Type= protein_coding chr4 169660062 169723187 169660062 169723187 + ENST00000613795.4@CLCN3 ENST00000613795.4 protein_coding 169660062,169680050,169687658,169689043,169690530,169692114,169695612,169697189,169703998,169706868,169713079,169719907 169660448,169680207,169687757,169689230,169690652,169692320,169695692,169697734,169704184,169707266,169713295,169723187 Gene ID= ENSG00000109572.13 TPM= 20.83 Transcript Type= protein_coding chr4 169729465 169757953 169729465 169757953 - ENST00000393381.2@HPF1 ENST00000393381.2 protein_coding 169757830,169753676,169750536,169748744,169741957,169737660,169731704,169729465 169757953,169753835,169750725,169748842,169742107,169737747,169731876,169729709 Gene ID= ENSG00000056050.6 TPM= 30.79 Transcript Type= protein_coding chr4 173168766 173323968 173168766 173323968 + transcript2571.chr4.nic@GALNT7 transcript2571.chr4.nic protein_coding 173168766,173247980,173292108,173295396,173295764,173297795,173302047,173303996,173313958,173317634,173318431,173321580 173168961,173248440,173292274,173295526,173295843,173297977,173302164,173304118,173314176,173317732,173318559,173323968 Gene ID= ENSG00000109586.11 TPM= 9.51 Transcript Type= NA chr4 173168753 173323967 173168753 173323967 + ENST00000265000.8@GALNT7 ENST00000265000.8 protein_coding 173168753,173247980,173292108,173295396,173295764,173298115,173302047,173303996,173313958,173317634,173318431,173321580 173168961,173248440,173292274,173295526,173295843,173298297,173302164,173304118,173314176,173317732,173318559,173323967 Gene ID= ENSG00000109586.11 TPM= 11.32 Transcript Type= protein_coding chr4 173331701 173334391 173331701 173334391 - ENST00000446922.6@HMGB2 ENST00000446922.6 protein_coding 173334246,173333500,173333069,173332821,173331701 173334391,173333669,173333214,173332995,173332238 Gene ID= ENSG00000164104.11 TPM= 2.72 Transcript Type= protein_coding chr4 173370943 173377532 173370943 173377532 + ENST00000296504.3@SAP30 ENST00000296504.3 protein_coding 173370943,173373390,173373939,173377205 173371497,173373515,173374037,173377532 Gene ID= ENSG00000164105.3 TPM= 28.07 Transcript Type= protein_coding chr4 174236658 174284264 174236658 174284264 - ENST00000393674.6@FBXO8 ENST00000393674.6 protein_coding 174283410,174262764,174259699,174241100,174238994,174236658 174284264,174263100,174259825,174241218,174239190,174237599 Gene ID= ENSG00000164117.13 TPM= 30.79 Transcript Type= protein_coding chr4 174283332 174320330 174283332 174320330 + transcript2581.chr4.nic@CEP44 transcript2581.chr4.nic protein_coding 174283332,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174316530,174317335 174284061,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174316567,174320330 Gene ID= ENSG00000164118.12 TPM= 3.47 Transcript Type= NA chr4 174283906 174320330 174283906 174320330 + transcript2582.chr4.nic@CEP44 transcript2582.chr4.nic protein_coding 174283906,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174316530,174317335 174284140,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174316290,174316567,174320330 Gene ID= ENSG00000164118.12 TPM= 3.47 Transcript Type= NA chr4 174283332 174320330 174283332 174320330 + transcript2583.chr4.nic@CEP44 transcript2583.chr4.nic protein_coding 174283332,174297966,174299072,174302039,174303703,174304247,174308689,174309850,174310783,174316166,174318835 174283943,174298062,174299210,174302186,174303849,174304369,174308859,174310056,174310858,174318665,174320330 Gene ID= ENSG00000164118.12 TPM= 2.11 Transcript Type= NA chr4 174489162 174522309 174489162 174522309 - transcript2590.chr4.nic@HPGD transcript2590.chr4.nic protein_coding 174521944,174517971,174508696,174495548,174493151,174489162 174522309,174518077,174508792,174495624,174493314,174492094 Gene ID= ENSG00000164120.13 TPM= 2.72 Transcript Type= NA chr4 175632934 176002332 175632934 176002332 - ENST00000280187.11@GPM6A ENST00000280187.11 protein_coding 176002309,175812191,175701575,175673680,175651834,175640753,175640129,175632934 176002332,175812249,175701767,175673836,175651987,175640829,175640194,175635057 Gene ID= ENSG00000150625.16 TPM= 19.92 Transcript Type= protein_coding chr4 176319964 176332245 176319964 176332245 + ENST00000503362.1@SPCS3 ENST00000503362.1 protein_coding 176319964,176322170,176324181,176327162,176328198 176320219,176322243,176324257,176327277,176332245 Gene ID= ENSG00000129128.12 TPM= 47.99 Transcript Type= protein_coding chr4 177430770 177442503 177430770 177442503 - ENST00000264595.6@AGA ENST00000264595.6 protein_coding 177442249,177440273,177439576,177438745,177437405,177436276,177434382,177433214,177430770 177442503,177440426,177439688,177438857,177437519,177436351,177434489,177433347,177431808 Gene ID= ENSG00000038002.8 TPM= 46.18 Transcript Type= protein_coding chr4 180058816 180178671 180058816 180178671 + transcript2609.chr4.nnic@NA transcript2609.chr4.nnic NA 180058816,180148815,180176977,180178126 180059282,180148934,180177114,180178671 Gene ID= novel_gene_chr4_2610 TPM= 7.24 Transcript Type= NA chr4 182323944 182351348 182323944 182351348 + transcript2627.chr4.nic@TENM3 transcript2627.chr4.nic protein_coding 182323944,182346651,182349841 182324252,182346929,182351348 Gene ID= ENSG00000218336.8 TPM= 1.81 Transcript Type= NA chr4 182243429 182803024 182243429 182803024 + ENST00000511685.5@TENM3 ENST00000511685.5 protein_coding 182243429,182323946,182346651,182600924,182628651,182653771,182673005,182679666,182680248,182680543,182681814,182688166,182714087,182728965,182730200,182730878,182736808,182738401,182743170,182751800,182753450,182754385,182773472,182774918,182789093,182792274,182796637,182799596 182243476,182324252,182346929,182601161,182628889,182653893,182673219,182679876,182680349,182680737,182682014,182688351,182714233,182729181,182730319,182731139,182737075,182738544,182743419,182752032,182753604,182755259,182773647,182775153,182789389,182793885,182796767,182803024 Gene ID= ENSG00000218336.8 TPM= 6.34 Transcript Type= protein_coding chr4 182871124 182880357 182871124 182880357 . transcript2629.chr4.nnic@NA transcript2629.chr4.nnic NA 182871124,182877511,182880031 182874878,182877760,182880357 Gene ID= novel_gene_chr4_2630 TPM= 1.81 Transcript Type= NA chr4 182890097 182917451 182890097 182917451 - transcript2635.chr4.nic@DCTD transcript2635.chr4.nic protein_coding 182916673,182916419,182915461,182914923,182894489,182893031,182890097 182917451,182916539,182915575,182915058,182894605,182893127,182891477 Gene ID= ENSG00000129187.14 TPM= 8.15 Transcript Type= NA chr4 182890092 182917339 182890092 182917339 - transcript2641.chr4.nic@DCTD transcript2641.chr4.nic protein_coding 182916673,182915461,182914923,182894489,182893031,182890092 182917339,182915575,182915058,182894605,182893127,182891477 Gene ID= ENSG00000129187.14 TPM= 10.71 Transcript Type= NA chr4 182890060 182917369 182890060 182917369 - ENST00000500813.6@DCTD ENST00000500813.6 protein_coding 182917288,182915461,182894489,182893031,182890060 182917369,182915575,182894605,182893127,182891477 Gene ID= ENSG00000129187.14 TPM= 6.18 Transcript Type= nonsense_mediated_decay chr4 182890104 182917379 182890104 182917379 - ENST00000357067.7@DCTD ENST00000357067.7 protein_coding 182917288,182915461,182914923,182894489,182893031,182890104 182917379,182915575,182915058,182894605,182893127,182891477 Gene ID= ENSG00000129187.14 TPM= 161.94 Transcript Type= protein_coding chr4 182890255 182917594 182890255 182917594 - ENST00000438320.6@DCTD ENST00000438320.6 protein_coding 182917311,182915461,182914923,182894489,182893031,182890255 182917594,182915575,182915058,182894605,182893127,182891477 Gene ID= ENSG00000129187.14 TPM= 8.15 Transcript Type= protein_coding chr4 183444635 183448198 183444635 183448198 + ENST00000302350.4@CDKN2AIP ENST00000302350.4 protein_coding 183444635,183445535,183446088 183445069,183445634,183448198 Gene ID= ENSG00000168564.5 TPM= 15.39 Transcript Type= protein_coding chr4 183444591 183448198 183444591 183448198 + ENST00000504169.1@CDKN2AIP ENST00000504169.1 protein_coding 183444591,183445535,183446088 183445069,183445665,183448198 Gene ID= ENSG00000168564.5 TPM= 10.87 Transcript Type= protein_coding chr4 183504994 183511096 183504994 183511096 + ENST00000302327.3@ING2 ENST00000302327.3 protein_coding 183504994,183510282 183505367,183511096 Gene ID= ENSG00000168556.6 TPM= 46.18 Transcript Type= protein_coding chr4 183639636 183659187 183639636 183659187 - transcript2673.chr4.nic@RWDD4 transcript2673.chr4.nic protein_coding 183658929,183655881,183651218,183650984,183649451,183646351,183639636 183659187,183655961,183651327,183651131,183649568,183646537,183641468 Gene ID= ENSG00000182552.14 TPM= 6.79 Transcript Type= NA chr4 183639636 183659178 183639636 183659178 - ENST00000327570.13@RWDD4 ENST00000327570.13 protein_coding 183658929,183655881,183651218,183650984,183649451,183646488,183639636 183659178,183655961,183651327,183651131,183649568,183646537,183641468 Gene ID= ENSG00000182552.14 TPM= 100.97 Transcript Type= protein_coding chr4 183659267 183713592 183659267 183713592 + ENST00000334690.10@TRAPPC11 ENST00000334690.10 protein_coding 183659267,183663847,183666257,183667060,183668003,183674713,183675164,183677458,183679353,183680120,183682732,183683975,183684145,183684305,183684696,183685084,183685271,183686618,183691316,183692960,183693589,183693917,183694604,183697503,183697679,183701697,183704979,183706807,183708407,183712600 183659447,183664071,183666426,183667130,183668117,183674812,183675237,183677554,183679486,183680267,183682825,183684054,183684223,183684359,183684841,183685145,183685403,183686748,183691471,183693147,183693737,183694038,183694723,183697568,183697835,183701808,183705070,183706940,183708574,183713592 Gene ID= ENSG00000168538.15 TPM= 10.87 Transcript Type= protein_coding chr4 184334279 184347914 184334279 184347914 - transcript2686.chr4.nnic@LINC02363 transcript2686.chr4.nnic lincRNA 184347702,184341953,184334527,184334279 184347914,184342053,184334611,184334419 Gene ID= ENSG00000180712.3 TPM= 4.83 Transcript Type= NA chr4 184334279 184347931 184334279 184347931 - transcript2688.chr4.nnic@LINC02363 transcript2688.chr4.nnic lincRNA 184347773,184341953,184334527,184334279 184347931,184342053,184334611,184334419 Gene ID= ENSG00000180712.3 TPM= 5.28 Transcript Type= NA chr4 184338019 184347914 184338019 184347914 - transcript2692.chr4.nnic@LINC02363 transcript2692.chr4.nnic lincRNA 184347713,184341953,184339252,184338019 184347914,184342053,184339369,184338237 Gene ID= ENSG00000180712.3 TPM= 2.72 Transcript Type= NA chr4 184334286 184347914 184334286 184347914 - transcript2696.chr4.nnic@LINC02363 transcript2696.chr4.nnic lincRNA 184347702,184341953,184334286 184347914,184342053,184334419 Gene ID= ENSG00000180712.3 TPM= 4.53 Transcript Type= NA chr4 184333247 184347931 184333247 184347931 - transcript2698.chr4.nnic@LINC02363 transcript2698.chr4.nnic lincRNA 184347773,184341953,184333247 184347931,184342053,184334419 Gene ID= ENSG00000180712.3 TPM= 5.89 Transcript Type= NA chr4 184338020 184347914 184338020 184347914 - transcript2701.chr4.nnic@LINC02363 transcript2701.chr4.nnic lincRNA 184347702,184341953,184338020 184347914,184342053,184338237 Gene ID= ENSG00000180712.3 TPM= 3.62 Transcript Type= NA chr4 184339058 184347914 184339058 184347914 - transcript2703.chr4.nnic@LINC02363 transcript2703.chr4.nnic lincRNA 184347702,184341953,184339058 184347914,184342053,184339369 Gene ID= ENSG00000180712.3 TPM= 5.43 Transcript Type= NA chr4 184334279 184339460 184334279 184339460 . transcript2699.chr4.nnic@NA transcript2699.chr4.nnic NA 184334279,184334527,184339252 184334419,184334611,184339460 Gene ID= novel_gene_chr4_2700 TPM= 6.34 Transcript Type= NA chr4 184387732 184474045 184387732 184474045 - transcript2711.chr4.nic@IRF2 transcript2711.chr4.nic protein_coding 184473990,184428978,184419469,184418532,184418167,184408158,184398915,184390703,184387732 184474045,184429070,184419568,184418708,184418213,184408275,184399079,184390749,184389066 Gene ID= ENSG00000168310.10 TPM= 2.72 Transcript Type= NA chr4 184387724 184393051 184387724 184393051 - transcript2715.chr4.nnic@IRF2 transcript2715.chr4.nnic protein_coding 184392830,184390703,184387724 184393051,184390749,184389066 Gene ID= ENSG00000168310.10 TPM= 1.81 Transcript Type= NA chr4 184387713 184474580 184387713 184474580 - ENST00000393593.7@IRF2 ENST00000393593.7 protein_coding 184474379,184428978,184419469,184418532,184418167,184408158,184398915,184390703,184387713 184474580,184429070,184419568,184418708,184418213,184408275,184399079,184390749,184389066 Gene ID= ENSG00000168310.10 TPM= 62.48 Transcript Type= protein_coding chr4 184627696 184649475 184627696 184649475 - ENST00000308394.8@CASP3 ENST00000308394.8 protein_coding 184649395,184648465,184638401,184635294,184632268,184631765,184631037,184627696 184649475,184648631,184638468,184635418,184632396,184631940,184631157,184629501 Gene ID= ENSG00000164305.18 TPM= 17.21 Transcript Type= protein_coding chr4 184627697 184649452 184627697 184649452 - transcript2719.chr4.nic@CASP3 transcript2719.chr4.nic protein_coding 184649395,184648503,184638401,184635294,184632268,184631765,184631037,184627697 184649452,184648631,184638468,184635418,184632396,184631940,184631157,184629501 Gene ID= ENSG00000164305.18 TPM= 2.72 Transcript Type= NA chr4 184627696 184649509 184627696 184649509 - ENST00000523916.5@CASP3 ENST00000523916.5 protein_coding 184649395,184638401,184635294,184632268,184631765,184631037,184627696 184649509,184638468,184635418,184632396,184631940,184631157,184629501 Gene ID= ENSG00000164305.18 TPM= 15.39 Transcript Type= protein_coding chr4 184649725 184694952 184649725 184694952 + ENST00000512834.5@PRIMPOL ENST00000512834.5 protein_coding 184649725,184652023,184657082,184659340,184661774,184665917,184672173,184678232,184682248,184685412,184685576,184691499,184691666,184694522 184649908,184652100,184657320,184659437,184661903,184666064,184672460,184678394,184682336,184685498,184685684,184691581,184691712,184694952 Gene ID= ENSG00000164306.10 TPM= 5.43 Transcript Type= protein_coding chr4 184755596 184826039 184755596 184826039 - transcript2729.chr4.nic@ACSL1 transcript2729.chr4.nic protein_coding 184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770255,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755596 184826039,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770332,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265 Gene ID= ENSG00000151726.13 TPM= 5.66 Transcript Type= NA chr4 184755596 184805694 184755596 184805694 - transcript2732.chr4.nic@ACSL1 transcript2732.chr4.nic protein_coding 184805527,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755596 184805694,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265 Gene ID= ENSG00000151726.13 TPM= 17.59 Transcript Type= NA chr4 184755595 184826119 184755595 184826119 - ENST00000454703.6@ACSL1 ENST00000454703.6 protein_coding 184825916,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755595 184826119,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265 Gene ID= ENSG00000151726.13 TPM= 1.74 Transcript Type= protein_coding chr4 184755601 184826094 184755601 184826094 - ENST00000281455.6@ACSL1 ENST00000281455.6 protein_coding 184825916,184803320,184788617,184783927,184780332,184776884,184776484,184773843,184773663,184773081,184770399,184768316,184766622,184765891,184764853,184763167,184762407,184760357,184757819,184757635,184755601 184826094,184803546,184788731,184783991,184780433,184776983,184776662,184773875,184773714,184773154,184770476,184768450,184766756,184765986,184764925,184763255,184762523,184760500,184757920,184757706,184757265 Gene ID= ENSG00000151726.13 TPM= 71.01 Transcript Type= protein_coding chr4 185143241 185150382 185143241 185150382 + ENST00000281456.10@SLC25A4 ENST00000281456.10 protein_coding 185143241,185144764,185145759,185146814 185143483,185145250,185145899,185150382 Gene ID= ENSG00000151729.10 TPM= 278.46 Transcript Type= protein_coding chr4 185143278 185147241 185143278 185147241 + ENST00000491736.1@SLC25A4 ENST00000491736.1 protein_coding 185143278,185144764,185145355,185146814 185143483,185145250,185145899,185147241 Gene ID= ENSG00000151729.10 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr4 185160102 185204001 185160102 185204001 - transcript2763.chr4.nic@CFAP97 transcript2763.chr4.nic protein_coding 185203785,185190143,185175786,185164029,185160102 185204001,185191212,185176051,185164179,185162925 Gene ID= ENSG00000164323.12 TPM= 6.34 Transcript Type= NA chr4 185159665 185204001 185159665 185204001 - ENST00000458385.6@CFAP97 ENST00000458385.6 protein_coding 185203898,185190143,185175786,185164029,185159665 185204001,185191212,185176051,185164179,185162925 Gene ID= ENSG00000164323.12 TPM= 41.66 Transcript Type= protein_coding chr4 185209568 185363951 185209568 185363951 + transcript2755.chr4.nnic@SNX25 transcript2755.chr4.nnic protein_coding 185209568,185247294,185258848,185264438,185266969,185288012,185310635,185320733,185323528,185339379,185341976,185346537,185351445,185353485,185357671,185361924,185362611,185363385 185210255,185247378,185259064,185264610,185267155,185288082,185310816,185320864,185323800,185339510,185342116,185346650,185351609,185353602,185357737,185362105,185362711,185363951 Gene ID= ENSG00000109762.15 TPM= 3.62 Transcript Type= NA chr4 185396012 185400235 185396012 185400235 + transcript2775.chr4.nic@ANKRD37 transcript2775.chr4.nic protein_coding 185396012,185396832,185397150,185398937,185399570,185400017 185396424,185396950,185397302,185399028,185399773,185400235 Gene ID= ENSG00000186352.8 TPM= 7.24 Transcript Type= NA chr4 185396005 185400235 185396005 185400235 + transcript2777.chr4.nic@ANKRD37 transcript2777.chr4.nic protein_coding 185396005,185397150,185398937,185399570,185400017 185396424,185397302,185399028,185399773,185400235 Gene ID= ENSG00000186352.8 TPM= 1.81 Transcript Type= NA chr4 185400317 185425976 185400317 185425976 - transcript2766.chr4.nic@UFSP2 transcript2766.chr4.nic protein_coding 185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185400317 185425976,185422563,185418770,185418507,185415867,185415347,185413872,185408390,185408060,185405856,185403618,185400478 Gene ID= ENSG00000109775.10 TPM= 1.81 Transcript Type= NA chr4 185399540 185425979 185399540 185425979 - ENST00000514247.5@UFSP2 ENST00000514247.5 protein_coding 185425866,185422485,185418612,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185399540 185425979,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478 Gene ID= ENSG00000109775.10 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr4 185400289 185425985 185400289 185425985 - ENST00000264689.10@UFSP2 ENST00000264689.10 protein_coding 185425866,185422485,185418587,185418441,185415710,185415155,185413726,185408271,185407936,185405780,185403494,185400289 185425985,185422563,185418770,185418507,185415867,185415347,185413872,185408435,185408060,185405856,185403618,185400478 Gene ID= ENSG00000109775.10 TPM= 34.41 Transcript Type= protein_coding chr4 185585523 185775531 185585523 185775531 - transcript2826.chr4.nic@SORBS2 transcript2826.chr4.nic protein_coding 185775227,185690562,185684754,185678796,185678423,185662104,185657424,185652662,185651784,185649467,185646668,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585523 185775531,185690611,185684846,185678822,185678547,185662242,185657596,185652728,185651828,185649656,185646782,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688 Gene ID= ENSG00000154556.17 TPM= 14.06 Transcript Type= NA chr4 185585505 185657272 185585505 185657272 - transcript2849.chr4.nic@SORBS2 transcript2849.chr4.nic protein_coding 185656615,185652662,185651784,185649467,185646668,185638877,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585505 185657272,185652728,185651828,185649656,185646782,185639035,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688 Gene ID= ENSG00000154556.17 TPM= 23.19 Transcript Type= NA chr4 185585445 185657001 185585445 185657001 - transcript2851.chr4.nic@SORBS2 transcript2851.chr4.nic protein_coding 185656615,185652662,185649467,185646668,185638877,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585445 185657001,185652728,185649656,185646782,185639035,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688 Gene ID= ENSG00000154556.17 TPM= 43.79 Transcript Type= NA chr4 185585523 185656994 185585523 185656994 - transcript2858.chr4.nic@SORBS2 transcript2858.chr4.nic protein_coding 185656615,185652662,185649467,185646668,185635355,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585523 185656994,185652728,185649656,185646782,185635411,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688 Gene ID= ENSG00000154556.17 TPM= 21.61 Transcript Type= NA chr4 185585445 185656802 185585445 185656802 - transcript2861.chr4.nic@SORBS2 transcript2861.chr4.nic protein_coding 185656615,185652662,185651784,185649467,185646668,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585445 185656802,185652728,185651828,185649656,185646782,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688 Gene ID= ENSG00000154556.17 TPM= 41.08 Transcript Type= NA chr4 185585445 185657272 185585445 185657272 - transcript2864.chr4.nic@SORBS2 transcript2864.chr4.nic protein_coding 185656615,185652662,185649467,185646668,185630549,185626832,185620063,185618585,185615045,185614831,185611780,185593886,185589679,185585445 185657272,185652728,185649656,185646782,185630598,185627019,185620151,185618631,185615159,185614959,185611980,185593935,185589785,185587688 Gene ID= ENSG00000154556.17 TPM= 109.72 Transcript Type= NA chr4 185639966 185775474 185639966 185775474 - transcript2871.chr4.nic@SORBS2 transcript2871.chr4.nic protein_coding 185775227,185690562,185684754,185678796,185678423,185662104,185657424,185652662,185651784,185649467,185639966 185775474,185690611,185684846,185678822,185678547,185662242,185657596,185652728,185651828,185649656,185646782 Gene ID= ENSG00000154556.17 TPM= 18.11 Transcript Type= NA chr4 186191520 186210801 186191520 186210801 + ENST00000378802.4@CYP4V2 ENST00000378802.4 protein_coding 186191520,186194500,186196003,186196940,186197533,186198957,186201157,186205200,186208865,186209093,186210469 186192037,186194612,186196088,186197130,186197602,186199083,186201342,186205302,186208999,186209272,186210801 Gene ID= ENSG00000145476.15 TPM= 4.53 Transcript Type= protein_coding chr4 189940788 189963204 189940788 189963204 + ENST00000226798.8@FRG1 ENST00000226798.8 protein_coding 189940788,189943202,189952162,189953068,189955037,189957398,189960748,189961822,189963093 189941071,189943272,189952287,189953125,189955151,189957502,189960839,189961932,189963204 Gene ID= ENSG00000109536.11 TPM= 27.17 Transcript Type= protein_coding chr5 196871 218215 196871 218215 - ENST00000296824.3@CCDC127 ENST00000296824.3 protein_coding 218093,216729,196871 218215,216859,205958 Gene ID= ENSG00000164366.3 TPM= 48.9 Transcript Type= protein_coding chr5 218241 256700 218241 256700 + ENST00000264932.10@SDHA ENST00000264932.10 protein_coding 218241,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334 218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256700 Gene ID= ENSG00000073578.16 TPM= 868.55 Transcript Type= protein_coding chr5 218303 256682 218303 256682 + ENST00000504309.5@SDHA ENST00000504309.5 protein_coding 218303,223482,224360,225419,225883,228185,230876,233477,235144,236428,240358,254393,256334 218418,223568,224521,225562,226047,228333,231000,233645,235339,236599,240476,254506,256682 Gene ID= ENSG00000073578.16 TPM= 4.21 Transcript Type= protein_coding chr5 218318 256679 218318 256679 + ENST00000510361.5@SDHA ENST00000510361.5 protein_coding 218318,223482,224360,225883,228185,230876,233477,235144,236428,240358,250992,251338,254393,256334 218418,223568,224521,226047,228333,231000,233645,235339,236599,240476,251103,251468,254506,256679 Gene ID= ENSG00000073578.16 TPM= 7.38 Transcript Type= protein_coding chr5 271621 314974 271621 314974 + ENST00000628729.2@PDCD6 ENST00000628729.2 protein_coding 271621,304177,306602,311293,314417 271821,304221,306760,311402,314974 Gene ID= ENSG00000249915.7 TPM= 3.62 Transcript Type= protein_coding chr5 271657 276940 271657 276940 + ENST00000509581.5@PDCD6 ENST00000509581.5 protein_coding 271657,272711,276012 271821,272772,276940 Gene ID= ENSG00000249915.7 TPM= 2.72 Transcript Type= protein_coding chr5 271657 314969 271657 314969 + ENST00000507528.5@PDCD6 ENST00000507528.5 protein_coding 271657,272711,304177,306602,311293,314417 271821,272772,304221,306754,311402,314969 Gene ID= ENSG00000249915.7 TPM= 21.73 Transcript Type= protein_coding chr5 443158 467296 443158 467296 + ENST00000512944.5@EXOC3 ENST00000512944.5 protein_coding 443158,446150,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727 443290,446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467296 Gene ID= ENSG00000180104.15 TPM= 67.92 Transcript Type= protein_coding chr5 446149 467285 446149 467285 + ENST00000315013.9@EXOC3 ENST00000315013.9 protein_coding 446149,447533,453370,456889,457900,459359,461960,462157,464290,465111,465718,466727 446349,447752,454051,457006,458025,459459,462070,462307,464412,465272,465845,467285 Gene ID= ENSG00000180104.15 TPM= 2.72 Transcript Type= protein_coding chr5 470510 473098 470510 473098 - ENST00000342584.3@PP7080 ENST00000342584.3 antisense_RNA 472679,470510 473098,471965 Gene ID= ENSG00000188242.4 TPM= 5.43 Transcript Type= antisense_RNA chr5 612272 653553 612272 653553 + ENST00000264935.5@CEP72 ENST00000264935.5 protein_coding 612272,618990,620069,624471,633769,635372,637517,639089,640408,644299,647805,652988 612443,619117,620261,624579,633947,635584,637818,639224,640604,644425,647916,653553 Gene ID= ENSG00000112877.7 TPM= 3.62 Transcript Type= protein_coding chr5 863737 892830 863737 892830 - transcript59.chr5.nic@BRD9 transcript59.chr5.nic protein_coding 892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863737 892830,891854,891287,889766,889165,887471,886707,884070,881182,879889,878487,876212,871564,870575,865581,864568 Gene ID= ENSG00000028310.17 TPM= 4.53 Transcript Type= NA chr5 863737 892830 863737 892830 - transcript60.chr5.nic@BRD9 transcript60.chr5.nic protein_coding 892606,891640,891155,889587,889021,887361,886592,883938,881107,879794,878355,876101,871526,870473,865414,863737 892830,891854,891287,889647,889165,887471,886767,884070,881182,879889,878487,876212,871564,870575,865581,864568 Gene ID= ENSG00000028310.17 TPM= 8.15 Transcript Type= NA chr5 1008802 1038678 1008802 1038678 + transcript66.chr5.nic@NKD2 transcript66.chr5.nic protein_coding 1008802,1009179,1009481,1032152,1033372,1034235,1034756,1035389,1036110,1037805 1009082,1009214,1009560,1032212,1033499,1034330,1034903,1035473,1036384,1038678 Gene ID= ENSG00000145506.13 TPM= 1.81 Transcript Type= NA chr5 1008802 1038678 1008802 1038678 + transcript73.chr5.nic@NKD2 transcript73.chr5.nic protein_coding 1008802,1009179,1009481,1032152,1033372,1034235,1034756,1035389,1037805 1009082,1009214,1009560,1032212,1033499,1034330,1034903,1036384,1038678 Gene ID= ENSG00000145506.13 TPM= 2.72 Transcript Type= NA chr5 1050377 1112093 1050377 1112093 - transcript80.chr5.nic@SLC12A7 transcript80.chr5.nic protein_coding 1111868,1094154,1093533,1088982,1088306,1086903,1085232,1083745,1081577,1079398,1077833,1076694,1076138,1075371,1074567,1073633,1065283,1064083,1063844,1060344,1057471,1053349,1050377 1112093,1094248,1093655,1089128,1088360,1087033,1085473,1083956,1081744,1079496,1078758,1076812,1076236,1075490,1074671,1073801,1065478,1064252,1063975,1060451,1057649,1053482,1052451 Gene ID= ENSG00000113504.20 TPM= 4.53 Transcript Type= NA chr5 1050376 1112035 1050376 1112035 - ENST00000264930.9@SLC12A7 ENST00000264930.9 protein_coding 1111868,1094154,1093533,1088982,1088306,1086903,1085232,1083745,1081577,1079398,1078701,1077833,1076694,1076138,1075371,1074567,1073633,1065283,1064083,1063844,1060344,1057471,1053349,1050376 1112035,1094248,1093655,1089128,1088360,1087033,1085473,1083956,1081744,1079496,1078758,1078007,1076812,1076236,1075490,1074671,1073801,1065478,1064252,1063975,1060451,1057649,1053482,1052451 Gene ID= ENSG00000113504.20 TPM= 43.47 Transcript Type= protein_coding chr5 1317744 1345099 1317744 1345099 - ENST00000320895.9@CLPTM1L ENST00000320895.9 protein_coding 1344680,1344351,1341671,1338860,1337904,1335057,1334289,1331799,1330280,1325751,1324763,1323787,1322877,1321764,1321635,1320616,1317744 1345099,1344451,1341860,1339005,1337982,1335174,1334383,1331883,1330383,1325816,1324813,1323869,1322911,1321819,1321679,1320731,1318453 Gene ID= ENSG00000049656.13 TPM= 286.15 Transcript Type= protein_coding chr5 1461423 1523977 1461423 1523977 - ENST00000283415.3@LPCAT1 ENST00000283415.3 protein_coding 1523710,1501461,1494700,1489746,1488391,1483428,1480942,1479621,1477404,1474560,1473957,1470826,1466749,1461423 1523977,1501603,1494914,1489858,1488451,1483486,1480976,1479675,1477486,1474685,1474110,1470924,1466890,1463835 Gene ID= ENSG00000153395.9 TPM= 100.52 Transcript Type= protein_coding chr5 1567483 1633947 1567483 1633947 - transcript107.chr5.nnic@AC026412.1 transcript107.chr5.nnic transcribed_unprocessed_pseudogene 1633808,1632845,1602691,1599627,1593113,1589247,1584984,1579277,1576179,1574182,1567483 1633947,1632906,1602735,1599827,1593284,1589365,1585133,1579484,1576309,1574295,1568998 Gene ID= ENSG00000188002.10 TPM= 1.81 Transcript Type= NA chr5 1597849 1633946 1597849 1633946 - transcript109.chr5.nnic@AC026412.1 transcript109.chr5.nnic transcribed_unprocessed_pseudogene 1633808,1632845,1630409,1628755,1626786,1602691,1599627,1597849 1633946,1632906,1630566,1629630,1626926,1602735,1599827,1599269 Gene ID= ENSG00000188002.10 TPM= 1.81 Transcript Type= NA chr5 1596069 1634023 1596069 1634023 - transcript112.chr5.nic@AC026412.1 transcript112.chr5.nic transcribed_unprocessed_pseudogene 1633808,1632845,1602691,1599627,1596069 1634023,1632906,1602735,1599827,1599269 Gene ID= ENSG00000188002.10 TPM= 5.43 Transcript Type= NA chr5 1628520 1634023 1628520 1634023 - transcript118.chr5.nic@AC026412.1 transcript118.chr5.nic transcribed_unprocessed_pseudogene 1633808,1632644,1628520 1634023,1632906,1629630 Gene ID= ENSG00000188002.10 TPM= 4.53 Transcript Type= NA chr5 1628699 1634023 1628699 1634023 - transcript119.chr5.nnic@AC026412.1 transcript119.chr5.nnic transcribed_unprocessed_pseudogene 1633808,1632845,1628699 1634023,1632906,1629630 Gene ID= ENSG00000188002.10 TPM= 5.43 Transcript Type= NA chr5 1798385 1801345 1798385 1801345 - transcript126.chr5.nnic@MRPL36 transcript126.chr5.nnic protein_coding 1801238,1799792,1798385 1801345,1800021,1798947 Gene ID= ENSG00000171421.12 TPM= 3.62 Transcript Type= NA chr5 1798387 1799895 1798387 1799895 - ENST00000508987.1@MRPL36 ENST00000508987.1 protein_coding 1799771,1798387 1799895,1798947 Gene ID= ENSG00000171421.12 TPM= 13.58 Transcript Type= protein_coding chr5 1798386 1799839 1798386 1799839 - ENST00000505059.6@MRPL36 ENST00000505059.6 protein_coding 1799792,1798386 1799839,1798947 Gene ID= ENSG00000171421.12 TPM= 35.32 Transcript Type= protein_coding chr5 1798390 1799838 1798390 1799838 - ENST00000382647.7@MRPL36 ENST00000382647.7 protein_coding 1799810,1798390 1799838,1798947 Gene ID= ENSG00000171421.12 TPM= 4.53 Transcript Type= protein_coding chr5 5422694 5490234 5422694 5490234 + ENST00000296564.8@ICE1 ENST00000296564.8 protein_coding 5422694,5436418,5437080,5439895,5441112,5443168,5444289,5447427,5447721,5447841,5454552,5457332,5460436,5466334,5468828,5473558,5475973,5486721,5489149 5422999,5436476,5437114,5439913,5441223,5443244,5444326,5447509,5447760,5447897,5454638,5457741,5465226,5466502,5468988,5473748,5476079,5486819,5490234 Gene ID= ENSG00000164151.11 TPM= 5.43 Transcript Type= protein_coding chr5 6371881 6378594 6371881 6378594 - ENST00000255764.3@MED10 ENST00000255764.3 protein_coding 6378362,6377166,6374324,6371881 6378594,6377249,6374426,6372601 Gene ID= ENSG00000133398.3 TPM= 51.62 Transcript Type= protein_coding chr5 6448623 6494909 6448623 6494909 + ENST00000399816.3@UBE2QL1 ENST00000399816.3 protein_coding 6448623,6491218 6449247,6494909 Gene ID= ENSG00000215218.3 TPM= 15.39 Transcript Type= protein_coding chr5 6599237 6633064 6599237 6633064 - transcript142.chr5.nnic@NSUN2 transcript142.chr5.nnic protein_coding 6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599237 6633064,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605375,6604685,6604276,6602500,6600232 Gene ID= ENSG00000037474.14 TPM= 2.11 Transcript Type= NA chr5 6599237 6633086 6599237 6633086 - transcript143.chr5.nic@NSUN2 transcript143.chr5.nic protein_coding 6632884,6632599,6631873,6625564,6623214,6621603,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599237 6633086,6632756,6631977,6625669,6623285,6621744,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232 Gene ID= ENSG00000037474.14 TPM= 3.92 Transcript Type= NA chr5 6599239 6633291 6599239 6633291 - ENST00000264670.10@NSUN2 ENST00000264670.10 protein_coding 6632884,6632599,6631873,6625564,6623214,6622016,6620106,6617950,6616727,6611725,6610955,6609826,6607200,6606820,6605273,6604605,6604138,6602461,6599239 6633291,6632756,6631977,6625669,6623285,6622100,6620298,6618024,6616857,6611798,6611085,6609922,6607384,6606912,6605408,6604685,6604276,6602500,6600232 Gene ID= ENSG00000037474.14 TPM= 60.06 Transcript Type= protein_coding chr5 6633343 6674386 6633343 6674386 + ENST00000274192.6@SRD5A1 ENST00000274192.6 protein_coding 6633343,6651842,6656078,6662816,6668202 6633869,6652008,6656179,6662966,6674386 Gene ID= ENSG00000145545.11 TPM= 7.24 Transcript Type= protein_coding chr5 6713007 6757048 6713007 6757048 + ENST00000230859.7@PAPD7 ENST00000230859.7 protein_coding 6713007,6737510,6738683,6739732,6742490,6743712,6746214,6748464,6749557,6750331,6751039,6752873,6754751 6714699,6737633,6738729,6739852,6742597,6743840,6746427,6748590,6749657,6750503,6751197,6753037,6757048 Gene ID= ENSG00000112941.13 TPM= 11.77 Transcript Type= protein_coding chr5 7859159 7869054 7859159 7869054 - transcript161.chr5.nic@FASTKD3 transcript161.chr5.nic protein_coding 7868979,7866646,7865898,7862823,7861583,7861149,7859159 7869054,7868107,7865983,7862997,7861652,7861263,7859539 Gene ID= ENSG00000124279.11 TPM= 9.06 Transcript Type= NA chr5 7859159 7869002 7859159 7869002 - ENST00000264669.9@FASTKD3 ENST00000264669.9 protein_coding 7868979,7866646,7865898,7862823,7861583,7861149,7859159 7869002,7868196,7865983,7862997,7861652,7861263,7859539 Gene ID= ENSG00000124279.11 TPM= 11.77 Transcript Type= protein_coding chr5 7869104 7901124 7869104 7901124 + ENST00000264668.6@MTRR ENST00000264668.6 protein_coding 7869104,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914 7869189,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124 Gene ID= ENSG00000124275.14 TPM= 4.75 Transcript Type= protein_coding chr5 7869209 7901120 7869209 7901120 + transcript170.chr5.nic@MTRR transcript170.chr5.nic protein_coding 7869209,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914 7869718,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901120 Gene ID= ENSG00000124275.14 TPM= 2.94 Transcript Type= NA chr5 7869148 7898182 7869148 7898182 + transcript171.chr5.nic@MTRR transcript171.chr5.nic protein_coding 7869148,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065 7869215,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7898182 Gene ID= ENSG00000124275.14 TPM= 2.72 Transcript Type= NA chr5 7869148 7901124 7869148 7901124 + ENST00000511461.5@MTRR ENST00000511461.5 protein_coding 7869148,7870770,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914 7869189,7870923,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124 Gene ID= ENSG00000124275.14 TPM= 6.57 Transcript Type= nonsense_mediated_decay chr5 7869189 7901124 7869189 7901124 + ENST00000440940.6@MTRR ENST00000440940.6 protein_coding 7869189,7870770,7873373,7875258,7877944,7883155,7885701,7886615,7889095,7891372,7892727,7895734,7896864,7897065,7899914 7869215,7870923,7873526,7875375,7878322,7883277,7885854,7886703,7889275,7891414,7892913,7895852,7896956,7897247,7901124 Gene ID= ENSG00000124275.14 TPM= 16.53 Transcript Type= protein_coding chr5 8457691 8463095 8457691 8463095 + ENST00000606459.1@MIR4458HG ENST00000606459.1 lincRNA 8457691,8459933 8457766,8463095 Gene ID= ENSG00000247516.6 TPM= 40.75 Transcript Type= lincRNA chr5 9546200 9550609 9546200 9550609 + ENST00000508179.1@SNHG18 ENST00000508179.1 lincRNA 9546200,9548990,9549302 9546530,9549149,9550609 Gene ID= ENSG00000250786.1 TPM= 2.72 Transcript Type= lincRNA chr5 10249921 10266412 10249921 10266412 + ENST00000280326.8@CCT5 ENST00000280326.8 protein_coding 10249921,10254145,10254674,10255955,10258111,10258386,10260792,10261560,10262481,10263134,10264656 10250445,10254205,10254838,10256153,10258303,10258535,10260911,10261745,10262618,10263314,10266412 Gene ID= ENSG00000150753.11 TPM= 277.1 Transcript Type= protein_coding chr5 10277611 10307676 10277611 10307676 - transcript197.chr5.nic@CMBL transcript197.chr5.nic protein_coding 10307515,10290548,10288422,10286354,10282197,10277611 10307676,10290781,10288529,10286496,10282288,10280632 Gene ID= ENSG00000164237.8 TPM= 16.3 Transcript Type= NA chr5 10279277 10308026 10279277 10308026 - ENST00000296658.3@CMBL ENST00000296658.3 protein_coding 10307625,10290548,10288422,10286354,10282197,10279277 10308026,10290781,10288529,10286496,10282288,10280632 Gene ID= ENSG00000164237.8 TPM= 74.25 Transcript Type= protein_coding chr5 10353674 10433999 10353674 10433999 + transcript200.chr5.nic@MARCH6 transcript200.chr5.nic protein_coding 10353674,10377798,10378759,10381800,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402059,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415473,10417270,10423735,10426390,10429893,10433594 10353917,10377894,10378832,10381943,10387066,10390500,10391731,10394143,10394785,10397344,10400842,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10433999 Gene ID= ENSG00000145495.15 TPM= 2.72 Transcript Type= NA chr5 10353703 10433961 10353703 10433961 + ENST00000449913.6@MARCH6 ENST00000449913.6 protein_coding 10353703,10377798,10378759,10386994,10390332,10391542,10394082,10394753,10397293,10400784,10402059,10402384,10402533,10403407,10405558,10407102,10410139,10411333,10414433,10415488,10417270,10423735,10426390,10429893,10433594 10353917,10377894,10378832,10387066,10390500,10391731,10394143,10394785,10397344,10400842,10402139,10402452,10402607,10403541,10405677,10407202,10410276,10411537,10414502,10415669,10417404,10423824,10426522,10430028,10433961 Gene ID= ENSG00000145495.15 TPM= 4.53 Transcript Type= protein_coding chr5 10679230 10761272 10679230 10761272 - ENST00000230895.10@DAP ENST00000230895.10 protein_coding 10761014,10748175,10683529,10679230 10761272,10748271,10683571,10681169 Gene ID= ENSG00000112977.15 TPM= 490.81 Transcript Type= protein_coding chr5 14143256 14399501 14143256 14399501 + transcript214.chr5.nic@TRIO transcript214.chr5.nic protein_coding 14143256,14270825,14280322,14286871,14290716,14293012,14297072,14304461,14316513,14330778,14336536,14358178,14359357,14363732,14364650,14366860,14368708,14369374,14374229,14378012,14381130,14387438,14387732,14388613,14389289,14390231,14390901,14394038,14397043,14398880 14143882,14270899,14280436,14287063,14291228,14293134,14297263,14304592,14316743,14330900,14336727,14358347,14359531,14363927,14364816,14366979,14368899,14369523,14374343,14378127,14381252,14387632,14387847,14388679,14389398,14390300,14390990,14394130,14397154,14399501 Gene ID= ENSG00000038382.18 TPM= 7.24 Transcript Type= NA chr5 15500148 15637099 15500148 15637099 + transcript229.chr5.nnic@FBXL7 transcript229.chr5.nnic protein_coding 15500148,15615983,15633826,15634347 15500713,15616072,15633923,15637099 Gene ID= ENSG00000183580.9 TPM= 2.72 Transcript Type= NA chr5 15927888 15939795 15927888 15939795 + ENST00000329673.8@FBXL7 ENST00000329673.8 protein_coding 15927888,15936450 15928501,15939795 Gene ID= ENSG00000183580.9 TPM= 7.24 Transcript Type= protein_coding chr5 16451519 16465792 16451519 16465792 - ENST00000308683.2@ZNF622 ENST00000308683.2 protein_coding 16465041,16463482,16463108,16458517,16453013,16451519 16465792,16463742,16463270,16458629,16453156,16451784 Gene ID= ENSG00000173545.4 TPM= 34.41 Transcript Type= protein_coding chr5 16665304 16676151 16665304 16676151 - transcript233.chr5.nic@MYO10 transcript233.chr5.nic protein_coding 16676031,16674853,16673682,16672689,16671422,16670526,16668277,16665304 16676151,16675150,16673889,16672825,16671542,16670978,16668468,16666793 Gene ID= ENSG00000145555.14 TPM= 1.81 Transcript Type= NA chr5 17217560 17276834 17217560 17276834 + ENST00000322611.3@BASP1 ENST00000322611.3 protein_coding 17217560,17275208 17217810,17276834 Gene ID= ENSG00000176788.8 TPM= 12.68 Transcript Type= protein_coding chr5 21459487 21525581 21459487 21525581 + transcript245.chr5.nnic@GUSBP1 transcript245.chr5.nnic transcribed_unprocessed_pseudogene 21459487,21459678,21461783,21501692,21522338 21459584,21459743,21461866,21501826,21525581 Gene ID= ENSG00000183666.16 TPM= 3.17 Transcript Type= NA chr5 21459513 21474439 21459513 21474439 + ENST00000508973.5@GUSBP1 ENST00000508973.5 transcribed_unprocessed_pseudogene 21459513,21459678,21461783,21473357 21459584,21459743,21461866,21474439 Gene ID= ENSG00000183666.16 TPM= 1.36 Transcript Type= processed_transcript chr5 31532266 31555058 31532266 31555058 + ENST00000325366.13@C5orf22 ENST00000325366.13 protein_coding 31532266,31534272,31535744,31538260,31540949,31541281,31545646,31551293,31552773 31532473,31534417,31535893,31538689,31541011,31541402,31545712,31551432,31555058 Gene ID= ENSG00000082213.17 TPM= 12.68 Transcript Type= protein_coding chr5 31639133 31646558 31639133 31646558 + transcript261.chr5.nnic@PDZD2 transcript261.chr5.nnic protein_coding 31639133,31646141,31646438 31639437,31646255,31646558 Gene ID= ENSG00000133401.15 TPM= 3.62 Transcript Type= NA chr5 31639410 32110931 31639410 32110931 + ENST00000438447.1@PDZD2 ENST00000438447.1 protein_coding 31639410,31798889,31983155,31995576,32000139,32010330,32037231,32048539,32052611,32053769,32057655,32057878,32059239,32061002,32069569,32071384,32072161,32073832,32077462,32087131,32092907,32097279,32098364,32101105,32107969 31639437,31799724,31983656,31995718,32000271,32010482,32037342,32048684,32052730,32053883,32057728,32058103,32059356,32061134,32069650,32071418,32072317,32074643,32077606,32091175,32093024,32097380,32098634,32101239,32110931 Gene ID= ENSG00000133401.15 TPM= 3.62 Transcript Type= protein_coding chr5 32124704 32174350 32124704 32174350 - ENST00000265070.6@GOLPH3 ENST00000265070.6 protein_coding 32173810,32143749,32135572,32124704 32174350,32143880,32135686,32126636 Gene ID= ENSG00000113384.13 TPM= 134.93 Transcript Type= protein_coding chr5 32227006 32313009 32227006 32313009 - ENST00000382142.7@MTMR12 ENST00000382142.7 protein_coding 32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32233773,32227006 32313009,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32233934,32230347 Gene ID= ENSG00000150712.10 TPM= 25.36 Transcript Type= protein_coding chr5 32227003 32313015 32227003 32313015 - transcript277.chr5.nic@MTMR12 transcript277.chr5.nic protein_coding 32312758,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32233773,32227003 32313015,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32233934,32230347 Gene ID= ENSG00000150712.10 TPM= 3.62 Transcript Type= NA chr5 32226994 32312938 32226994 32312938 - ENST00000280285.9@MTMR12 ENST00000280285.9 protein_coding 32312758,32276682,32273980,32271833,32270817,32268701,32263113,32255693,32248772,32248002,32243521,32242057,32239001,32234962,32226994 32312938,32276742,32274122,32271905,32270947,32268794,32263242,32255768,32248878,32248126,32243599,32242127,32239173,32235129,32230347 Gene ID= ENSG00000150712.10 TPM= 2.72 Transcript Type= protein_coding chr5 32354341 32444613 32354341 32444613 - transcript283.chr5.nnic@ZFR transcript283.chr5.nnic protein_coding 32444500,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354341 32444613,32444328,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939 Gene ID= ENSG00000056097.15 TPM= 2.94 Transcript Type= NA chr5 32354341 32444532 32354341 32444532 - transcript285.chr5.nic@ZFR transcript285.chr5.nic protein_coding 32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354341 32444532,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939 Gene ID= ENSG00000056097.15 TPM= 9.28 Transcript Type= NA chr5 32354341 32444771 32354341 32444771 - transcript287.chr5.nic@ZFR transcript287.chr5.nic protein_coding 32444622,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32379115,32364164,32363948,32354341 32444771,32444328,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32379210,32364275,32364045,32355939 Gene ID= ENSG00000056097.15 TPM= 3.85 Transcript Type= NA chr5 32354350 32444761 32354350 32444761 - ENST00000265069.12@ZFR ENST00000265069.12 protein_coding 32444622,32444229,32419821,32417648,32414969,32406774,32403906,32403106,32400007,32397219,32395159,32390275,32388469,32387549,32385508,32380075,32379115,32364164,32363948,32354350 32444761,32444328,32420103,32417792,32415187,32407021,32404097,32403397,32400203,32397338,32395304,32390437,32388674,32387699,32385649,32380172,32379210,32364275,32364045,32355939 Gene ID= ENSG00000056097.15 TPM= 117.04 Transcript Type= protein_coding chr5 32585499 32604079 32585499 32604079 + ENST00000265073.8@SUB1 ENST00000265073.8 protein_coding 32585499,32588512,32591563,32598961,32601005 32585625,32588584,32591685,32599069,32604079 Gene ID= ENSG00000113387.11 TPM= 158.32 Transcript Type= protein_coding chr5 33440776 33469539 33440776 33469539 + ENST00000265112.7@TARS ENST00000265112.7 protein_coding 33440776,33445324,33448541,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560 33441143,33445404,33448731,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33469539 Gene ID= ENSG00000113407.13 TPM= 114.1 Transcript Type= protein_coding chr5 33440964 33468085 33440964 33468085 + ENST00000508361.5@TARS ENST00000508361.5 protein_coding 33440964,33445324,33453289,33454945,33455587,33456002,33456149,33457257,33458566,33459695,33460902,33461158,33461667,33461906,33462099,33463753,33466871,33467560 33441143,33445404,33453412,33455066,33455704,33456066,33456227,33457403,33458664,33459861,33461064,33461295,33461744,33462006,33462203,33463825,33466985,33468085 Gene ID= ENSG00000113407.13 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr5 33657792 33892033 33657792 33892033 - transcript307.chr5.nic@ADAMTS12 transcript307.chr5.nic protein_coding 33891730,33881119,33751404,33683859,33683018,33661916,33657792 33892033,33881480,33751548,33684055,33683101,33662040,33658333 Gene ID= ENSG00000151388.10 TPM= 1.81 Transcript Type= NA chr5 34656329 34832613 34656329 34832613 + transcript317.chr5.nic@RAI14 transcript317.chr5.nic protein_coding 34656329,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34813574,34814583,34818797,34821732,34822956,34826330,34829732,34830688 34656475,34686955,34757614,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34813660,34814669,34818851,34821850,34824491,34826479,34829797,34832613 Gene ID= ENSG00000039560.13 TPM= 1.81 Transcript Type= NA chr5 34656237 34832627 34656237 34832627 + ENST00000265109.7@RAI14 ENST00000265109.7 protein_coding 34656237,34686872,34757468,34795939,34803712,34807800,34808584,34811012,34811767,34812180,34813574,34814583,34818797,34821732,34822956,34826330,34829732,34830688 34656475,34686955,34757598,34796027,34803776,34807857,34808654,34811118,34811945,34812208,34813660,34814669,34818851,34821850,34824491,34826479,34829797,34832627 Gene ID= ENSG00000039560.13 TPM= 22.64 Transcript Type= protein_coding chr5 34837549 34839278 34837549 34839278 - ENST00000606401.1@AC026801.3 ENST00000606401.1 antisense_RNA 34839183,34837549 34839278,34839017 Gene ID= ENSG00000272323.1 TPM= 11.77 Transcript Type= antisense_RNA chr5 34908554 34915548 34908554 34915548 - ENST00000325577.8@RAD1 ENST00000325577.8 protein_coding 34915416,34914695,34911554,34909258,34908554 34915548,34914961,34911812,34909356,34908948 Gene ID= ENSG00000113456.18 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr5 34929559 34955203 34929559 34955203 + transcript325.chr5.nic@DNAJC21 transcript325.chr5.nic protein_coding 34929559,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945722,34949543,34950170,34953926,34954553 34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34949677,34950342,34954001,34955203 Gene ID= ENSG00000168724.14 TPM= 1.81 Transcript Type= NA chr5 34929559 34956052 34929559 34956052 + transcript328.chr5.nic@DNAJC21 transcript328.chr5.nic protein_coding 34929559,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945722,34950170,34953926,34954553 34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34956052 Gene ID= ENSG00000168724.14 TPM= 4.53 Transcript Type= NA chr5 34930009 34957067 34930009 34957067 + transcript331.chr5.nnic@DNAJC21 transcript331.chr5.nnic protein_coding 34930009,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926,34954553 34930361,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34957067 Gene ID= ENSG00000168724.14 TPM= 5.43 Transcript Type= NA chr5 34929590 34955203 34929590 34955203 + transcript332.chr5.nnic@DNAJC21 transcript332.chr5.nnic protein_coding 34929590,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926,34954553 34929916,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34955203 Gene ID= ENSG00000168724.14 TPM= 3.62 Transcript Type= NA chr5 34929559 34946145 34929559 34946145 + transcript336.chr5.nic@DNAJC21 transcript336.chr5.nic protein_coding 34929559,34933815,34935710,34936144,34937326,34938858,34941096,34944867 34929916,34933908,34935833,34936266,34937630,34939009,34941183,34946145 Gene ID= ENSG00000168724.14 TPM= 3.62 Transcript Type= NA chr5 34929593 34955200 34929593 34955200 + ENST00000342382.8@DNAJC21 ENST00000342382.8 protein_coding 34929593,34933815,34935710,34936144,34937326,34938858,34941096,34944867,34945761,34950170,34953926,34954553 34929916,34933908,34935833,34936266,34937630,34939009,34941183,34945025,34945803,34950342,34954001,34955200 Gene ID= ENSG00000168724.14 TPM= 28.98 Transcript Type= protein_coding chr5 35055697 35230589 35055697 35230589 - ENST00000618457.4@PRLR ENST00000618457.4 protein_coding 35230268,35118061,35089551,35086208,35084470,35072575,35070124,35068779,35068216,35055697 35230589,35118122,35089663,35086340,35084639,35072744,35070265,35068878,35068285,35066102 Gene ID= ENSG00000113494.16 TPM= 3.62 Transcript Type= protein_coding chr5 35066782 35230486 35066782 35230486 - transcript340.chr5.nic@PRLR transcript340.chr5.nic protein_coding 35230268,35118061,35089551,35086208,35084470,35072575,35070124,35066782 35230486,35118122,35089663,35086340,35084639,35072744,35070265,35068878 Gene ID= ENSG00000113494.16 TPM= 1.81 Transcript Type= NA chr5 35617844 35710850 35617844 35710850 + ENST00000509059.5@SPEF2 ENST00000509059.5 protein_coding 35617844,35628460,35641431,35644355,35646667,35649361,35654540,35659019,35667072,35670059,35691037,35692570,35694288,35695735,35697690,35700496,35704554,35705651,35708948 35618055,35628562,35641683,35644525,35646807,35649425,35654726,35659207,35667259,35670227,35691256,35692724,35694348,35695796,35697793,35700752,35704662,35705808,35710850 Gene ID= ENSG00000152582.13 TPM= 1.81 Transcript Type= protein_coding chr5 35617844 35671575 35617844 35671575 + ENST00000282469.10@SPEF2 ENST00000282469.10 protein_coding 35617844,35628460,35641431,35644355,35646667,35649361,35654540,35659019,35667072,35670059 35618055,35628562,35641683,35644525,35646807,35649425,35654726,35659207,35667259,35671575 Gene ID= ENSG00000152582.13 TPM= 2.72 Transcript Type= protein_coding chr5 35617897 35671572 35617897 35671572 + transcript347.chr5.nic@SPEF2 transcript347.chr5.nic protein_coding 35617897,35628460,35641431,35646667,35649361,35654540,35659019,35667072,35670059 35618055,35628562,35641683,35646807,35649425,35654726,35659207,35667259,35671572 Gene ID= ENSG00000152582.13 TPM= 1.81 Transcript Type= NA chr5 35852417 35879600 35852417 35879600 + transcript349.chr5.nic@IL7R transcript349.chr5.nic protein_coding 35852417,35860852,35867306,35871056,35873480,35874449,35875512,35875983 35852938,35860990,35867463,35871213,35873648,35874542,35875587,35879600 Gene ID= ENSG00000168685.14 TPM= 2.72 Transcript Type= NA chr5 36098412 36151961 36098412 36151961 - ENST00000296603.4@LMBRD2 ENST00000296603.4 protein_coding 36151556,36143176,36142502,36141107,36137274,36136309,36124191,36122848,36122280,36117735,36116460,36115015,36114424,36111155,36109945,36108534,36105068,36098412 36151961,36143406,36142599,36141202,36137441,36136519,36124265,36122961,36122463,36117916,36116593,36115120,36114521,36111258,36109991,36108639,36105197,36104106 Gene ID= ENSG00000164187.6 TPM= 12.68 Transcript Type= protein_coding chr5 36192885 36241903 36192885 36241903 - transcript355.chr5.nnic@NADK2 transcript355.chr5.nnic protein_coding 36241843,36241499,36227477,36226475,36225542,36219596,36217748,36211844,36208625,36207170,36201106,36200227,36197541,36192885 36241903,36241609,36227565,36226563,36225623,36219679,36217884,36211922,36208690,36207265,36201161,36200280,36197664,36195282 Gene ID= ENSG00000152620.12 TPM= 5.89 Transcript Type= NA chr5 36192885 36241941 36192885 36241941 - transcript357.chr5.nic@NADK2 transcript357.chr5.nic protein_coding 36241499,36227477,36226475,36225542,36219596,36217748,36211844,36208625,36207170,36201106,36200227,36197541,36192885 36241941,36227565,36226563,36225623,36219679,36217884,36211922,36208690,36207265,36201161,36200280,36197664,36195282 Gene ID= ENSG00000152620.12 TPM= 19.47 Transcript Type= NA chr5 36193713 36242142 36193713 36242142 - ENST00000282512.7@NADK2 ENST00000282512.7 protein_coding 36242096,36227477,36226475,36225542,36219596,36217748,36211844,36207170,36201106,36200227,36197541,36193713 36242142,36227565,36226563,36225623,36219679,36217884,36211922,36207265,36201161,36200280,36197664,36195282 Gene ID= ENSG00000152620.12 TPM= 1.81 Transcript Type= protein_coding chr5 36606355 36688334 36606355 36688334 + ENST00000265113.8@SLC1A3 ENST00000265113.8 protein_coding 36606355,36608329,36629450,36671029,36674049,36676892,36679627,36680395,36683864,36686065 36606735,36608604,36629587,36671233,36674091,36677184,36679860,36680589,36683998,36688334 Gene ID= ENSG00000079215.13 TPM= 11.77 Transcript Type= protein_coding chr5 37288137 37371181 37288137 37371181 - ENST00000231498.7@NUP155 ENST00000231498.7 protein_coding 37370821,37364247,37363888,37358081,37352737,37351190,37350160,37349172,37348505,37342549,37341090,37337818,37333463,37331685,37330038,37329190,37328358,37327629,37325901,37323992,37317988,37314198,37310552,37309129,37307297,37305057,37304739,37303260,37302779,37301437,37299448,37298868,37294329,37292879,37288137 37371181,37364384,37363984,37358151,37352829,37351356,37350265,37349245,37348596,37342646,37341242,37337918,37333633,37331795,37330132,37329278,37328420,37327776,37325967,37324107,37318085,37314328,37310743,37309267,37307432,37305210,37304843,37303414,37302908,37301550,37299568,37298978,37294465,37292985,37292038 Gene ID= ENSG00000113569.15 TPM= 6.34 Transcript Type= protein_coding chr5 37379212 37753435 37379212 37753435 + ENST00000265107.8@WDR70 ENST00000265107.8 protein_coding 37379212,37379489,37381602,37392000,37396375,37437922,37443239,37479834,37516514,37605064,37697655,37701058,37702949,37721115,37722855,37724934,37726883,37752486 37379392,37379554,37381685,37392120,37396570,37437981,37443372,37479987,37516590,37605238,37697754,37701142,37703087,37721215,37722934,37725050,37727045,37753435 Gene ID= ENSG00000082068.8 TPM= 15.39 Transcript Type= protein_coding chr5 38445540 38464556 38445540 38464556 + ENST00000397210.7@EGFLAM ENST00000397210.7 protein_coding 38445540,38448301,38451315,38458311,38462908,38463832 38445702,38448379,38451458,38458394,38463011,38464556 Gene ID= ENSG00000164318.17 TPM= 2.72 Transcript Type= protein_coding chr5 38845855 38935642 38845855 38935642 + transcript384.chr5.nic@OSMR transcript384.chr5.nic protein_coding 38845855,38869032,38876201,38881593,38883827,38885349,38886039,38903882,38904353,38917546,38918840,38921615,38923150,38924422,38925204,38931883,38932463,38932872 38846126,38869117,38876373,38881764,38884111,38885484,38886190,38904024,38904503,38917622,38919062,38921794,38923254,38924595,38925371,38931964,38932535,38935642 Gene ID= ENSG00000145623.12 TPM= 15.85 Transcript Type= NA chr5 38845999 38935641 38845999 38935641 + ENST00000274276.7@OSMR ENST00000274276.7 protein_coding 38845999,38869032,38876201,38881593,38883827,38885349,38886039,38903882,38904353,38917546,38918840,38921615,38923150,38924422,38925204,38931883,38932463,38932872 38846387,38869117,38876373,38881764,38884111,38885484,38886190,38904024,38904503,38917622,38919062,38921794,38923254,38924595,38925371,38931964,38932535,38935641 Gene ID= ENSG00000145623.12 TPM= 12.22 Transcript Type= protein_coding chr5 38846001 38932663 38846001 38932663 + transcript386.chr5.nic@OSMR transcript386.chr5.nic protein_coding 38846001,38869032,38876201,38881593,38883827,38885349,38886039,38903882,38904353,38917546,38918840,38921615,38923150,38924422,38925204,38931883,38932463 38846126,38869117,38876373,38881764,38884111,38885484,38886190,38904024,38904503,38917622,38919062,38921794,38923254,38924595,38925371,38931964,38932663 Gene ID= ENSG00000145623.12 TPM= 4.98 Transcript Type= NA chr5 38846012 38932545 38846012 38932545 + transcript387.chr5.nic@OSMR transcript387.chr5.nic protein_coding 38846012,38869032,38876201,38881593,38883827,38885349,38886039,38903882,38904353,38917546,38918840,38921615,38923150,38924422,38925204,38931883,38932463 38846387,38869117,38876373,38881764,38884111,38885484,38886190,38904024,38904503,38917622,38919062,38921794,38923254,38924595,38925371,38931964,38932545 Gene ID= ENSG00000145623.12 TPM= 3.17 Transcript Type= NA chr5 38846012 38886656 38846012 38886656 + transcript390.chr5.nic@OSMR transcript390.chr5.nic protein_coding 38846012,38869032,38876201,38881593,38883827,38885349,38886039 38846387,38869117,38876373,38881764,38884111,38885484,38886656 Gene ID= ENSG00000145623.12 TPM= 4.53 Transcript Type= NA chr5 38937919 39074408 38937919 39074408 - ENST00000357387.7@RICTOR ENST00000357387.7 protein_coding 39074329,39074111,39021039,39003558,39002535,38996819,38990949,38981867,38978583,38975537,38971877,38967943,38967337,38967161,38966641,38964792,38962876,38962485,38962315,38960398,38959779,38959195,38958667,38958443,38957652,38955595,38954774,38953461,38952985,38952196,38949712,38947264,38946468,38945491,38944913,38944446,38942833,38937919 39074408,39074158,39021136,39003622,39002666,38996882,38991075,38982036,38978650,38975604,38971959,38968030,38967427,38967227,38966721,38964892,38963041,38962586,38962361,38960533,38959978,38959321,38958831,38958519,38957730,38955704,38954861,38953553,38953091,38952425,38950720,38947441,38946552,38945724,38945068,38944569,38942971,38942378 Gene ID= ENSG00000164327.12 TPM= 2.72 Transcript Type= protein_coding chr5 39371678 39425200 39371678 39425200 - transcript403.chr5.nnic@DAB2 transcript403.chr5.nnic protein_coding 39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39382618,39381454,39376650,39375997,39375014,39373390,39371678 39425200,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39383271,39381616,39377282,39376106,39375084,39373425,39372708 Gene ID= ENSG00000153071.14 TPM= 21.17 Transcript Type= NA chr5 39371678 39425170 39371678 39425170 - ENST00000320816.10@DAB2 ENST00000320816.10 protein_coding 39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39382618,39381454,39376650,39375997,39375014,39371678 39425170,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39383271,39381616,39377282,39376106,39375084,39373425 Gene ID= ENSG00000153071.14 TPM= 402.92 Transcript Type= protein_coding chr5 39385064 39425198 39385064 39425198 - transcript423.chr5.nic@DAB2 transcript423.chr5.nic protein_coding 39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39385064 39425198,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39385428 Gene ID= ENSG00000153071.14 TPM= 18.22 Transcript Type= NA chr5 39371678 39424980 39371678 39424980 - ENST00000339788.10@DAB2 ENST00000339788.10 protein_coding 39424804,39394230,39393254,39392365,39390444,39389852,39389097,39388799,39388305,39381454,39376650,39375997,39375014,39371678 39424980,39394421,39393393,39392463,39390575,39389932,39389123,39388852,39388367,39381616,39377282,39376106,39375084,39373425 Gene ID= ENSG00000153071.14 TPM= 16.85 Transcript Type= protein_coding chr5 40714475 40755975 40714475 40755975 - ENST00000337702.4@TTC33 ENST00000337702.4 protein_coding 40755824,40746798,40730262,40728345,40714475 40755975,40747019,40730343,40728476,40716498 Gene ID= ENSG00000113638.13 TPM= 19.02 Transcript Type= protein_coding chr5 40679498 40693735 40679498 40693735 + ENST00000302472.3@PTGER4 ENST00000302472.3 protein_coding 40679498,40680951,40691779 40680478,40681860,40693735 Gene ID= ENSG00000171522.5 TPM= 23.54 Transcript Type= protein_coding chr5 40711578 40798181 40711578 40798181 - transcript426.chr5.nnic@PRKAA1 transcript426.chr5.nnic protein_coding 40798063,40777445,40775410,40771719,40769416,40767466,40764752,40764514,40746798,40730262,40728345,40711578 40798181,40777586,40775503,40771863,40769503,40767690,40765238,40764640,40747019,40730343,40728476,40716498 Gene ID= ENSG00000132356.11 TPM= 3.62 Transcript Type= NA chr5 40759379 40798198 40759379 40798198 - ENST00000397128.6@PRKAA1 ENST00000397128.6 protein_coding 40798063,40777445,40775410,40771719,40769416,40767466,40764752,40764514,40759379 40798198,40777586,40775503,40771863,40769503,40767690,40765238,40764640,40763022 Gene ID= ENSG00000132356.11 TPM= 28.98 Transcript Type= protein_coding chr5 40825267 40835281 40825267 40835281 - transcript434.chr5.nnic@RPL37 transcript434.chr5.nnic protein_coding 40835183,40834471,40834181,40832442,40825267 40835281,40834606,40834265,40832573,40827951 Gene ID= ENSG00000145592.13 TPM= 171.15 Transcript Type= NA chr5 40825262 40835335 40825262 40835335 - ENST00000274242.9@RPL37 ENST00000274242.9 protein_coding 40835183,40834471,40834181,40825262 40835335,40834606,40834265,40832573 Gene ID= ENSG00000145592.13 TPM= 11.77 Transcript Type= protein_coding chr5 40841184 40855354 40841184 40855354 + ENST00000254691.9@CARD6 ENST00000254691.9 protein_coding 40841184,40843152,40852174 40841665,40843709,40855354 Gene ID= ENSG00000132357.13 TPM= 21.73 Transcript Type= protein_coding chr5 40909252 40982939 40909252 40982939 + ENST00000313164.9@C7 ENST00000313164.9 protein_coding 40909252,40928580,40931064,40934325,40936338,40937552,40945198,40947602,40949904,40955387,40958033,40959449,40962085,40964741,40972403,40976750,40979725,40981392 40909616,40928635,40931139,40934466,40936485,40937690,40945368,40947845,40950014,40955553,40958261,40959620,40962172,40964873,40972594,40976840,40979909,40982939 Gene ID= ENSG00000112936.18 TPM= 2248.08 Transcript Type= protein_coding chr5 41142234 41261438 41142234 41261438 - ENST00000263413.7@C6 ENST00000263413.7 protein_coding 41261194,41203088,41201558,41199768,41195792,41186070,41181359,41176475,41172225,41161693,41160142,41159082,41158674,41154972,41153810,41149935,41149241,41142234 41261438,41203250,41201714,41199912,41195933,41186208,41181559,41176715,41172347,41161859,41160367,41159253,41158785,41155104,41153998,41150025,41149482,41143006 Gene ID= ENSG00000039537.13 TPM= 2.72 Transcript Type= protein_coding chr5 41730065 41870542 41730065 41870542 - transcript484.chr5.nnic@OXCT1 transcript484.chr5.nnic protein_coding 41870281,41862642,41861314,41853419,41850030,41842675,41840451,41807331,41805567,41803069,41801022,41794677,41794003,41749527,41739390,41730065 41870542,41862750,41861404,41853554,41850179,41842781,41840511,41807438,41805681,41803163,41801070,41794749,41794078,41749607,41739491,41731770 Gene ID= ENSG00000083720.12 TPM= 2.26 Transcript Type= NA chr5 41730065 41870519 41730065 41870519 - ENST00000196371.9@OXCT1 ENST00000196371.9 protein_coding 41870281,41862642,41861314,41853419,41850030,41842675,41840451,41807331,41805567,41803069,41801022,41794677,41794003,41762111,41749527,41739390,41730065 41870519,41862750,41861404,41853554,41850179,41842781,41840511,41807438,41805681,41803163,41801070,41794749,41794078,41762200,41749607,41739491,41731770 Gene ID= ENSG00000083720.12 TPM= 59.31 Transcript Type= protein_coding chr5 41904349 41921636 41904349 41921636 + ENST00000381647.6@C5orf51 ENST00000381647.6 protein_coding 41904349,41907736,41909746,41911048,41912069,41917016 41904467,41907842,41909892,41911179,41912183,41921636 Gene ID= ENSG00000205765.8 TPM= 9.06 Transcript Type= protein_coding chr5 41925254 41941743 41925254 41941743 + ENST00000281623.7@FBXO4 ENST00000281623.7 protein_coding 41925254,41927013,41929697,41933946,41934133,41939441,41941192 41925498,41927248,41929917,41934021,41934308,41939616,41941743 Gene ID= ENSG00000151876.12 TPM= 11.77 Transcript Type= protein_coding chr5 41925301 41941568 41925301 41941568 + ENST00000509134.1@FBXO4 ENST00000509134.1 protein_coding 41925301,41927013,41929697,41933946,41934133,41941192 41925498,41927248,41929917,41934021,41934308,41941568 Gene ID= ENSG00000151876.12 TPM= 2.72 Transcript Type= protein_coding chr5 42423430 42721824 42423430 42721824 + transcript492.chr5.nic@GHR transcript492.chr5.nic protein_coding 42423430,42565864,42688890,42694917,42699824,42711207,42713429,42718052,42718453 42423955,42565944,42689019,42695089,42700002,42711372,42713519,42718121,42721824 Gene ID= ENSG00000112964.13 TPM= 3.62 Transcript Type= NA chr5 42799880 42812079 42799880 42812079 - ENST00000514985.5@SELENOP ENST00000514985.5 protein_coding 42811836,42808151,42806896,42804656,42799880 42812079,42808366,42807108,42804773,42801331 Gene ID= ENSG00000250722.5 TPM= 868.42 Transcript Type= protein_coding chr5 43014736 43067419 43014736 43067419 - ENST00000503152.1@AC025171.1 ENST00000503152.1 sense_overlapping 43067298,43067087,43014736 43067419,43067157,43015150 Gene ID= ENSG00000177738.3 TPM= 1.81 Transcript Type= sense_overlapping chr5 43121596 43176324 43121596 43176324 + ENST00000505606.6@ZNF131 ENST00000505606.6 protein_coding 43121596,43122039,43123209,43139165,43161249,43161709,43173318,43174447 43121828,43122177,43123310,43139309,43161606,43161931,43173448,43176324 Gene ID= ENSG00000172262.11 TPM= 3.62 Transcript Type= protein_coding chr5 43120899 43176223 43120899 43176223 + transcript525.chr5.nic@ZNF131 transcript525.chr5.nic protein_coding 43120899,43122039,43123209,43139165,43161249,43173318,43174447 43121123,43122177,43123310,43139309,43161931,43173448,43176223 Gene ID= ENSG00000172262.11 TPM= 3.62 Transcript Type= NA chr5 43121612 43176322 43121612 43176322 + transcript528.chr5.nic@ZNF131 transcript528.chr5.nic protein_coding 43121612,43122039,43123209,43139165,43161249,43173318,43174447 43121828,43122177,43123310,43139309,43161931,43173448,43176322 Gene ID= ENSG00000172262.11 TPM= 1.81 Transcript Type= NA chr5 43121598 43176247 43121598 43176247 + ENST00000509634.5@ZNF131 ENST00000509634.5 protein_coding 43121598,43123209,43139165,43161249,43161709,43173318,43174447 43122177,43123310,43139309,43161606,43161931,43173448,43176247 Gene ID= ENSG00000172262.11 TPM= 1.81 Transcript Type= protein_coding chr5 43289395 43313493 43289395 43313493 - ENST00000325110.10@HMGCS1 ENST00000325110.10 protein_coding 43313356,43307766,43298518,43298009,43297002,43295752,43294691,43294056,43292848,43292474,43289395 43313493,43307824,43298975,43298134,43297166,43295917,43294861,43294162,43292973,43292637,43291220 Gene ID= ENSG00000112972.14 TPM= 5.89 Transcript Type= protein_coding chr5 43289395 43313512 43289395 43313512 - ENST00000433297.2@HMGCS1 ENST00000433297.2 protein_coding 43313356,43298518,43298009,43297002,43295752,43294691,43294056,43292848,43292474,43289395 43313512,43298975,43298134,43297166,43295917,43294861,43294162,43292973,43292637,43291220 Gene ID= ENSG00000112972.14 TPM= 5.89 Transcript Type= protein_coding chr5 43444296 43483875 43444296 43483875 - transcript541.chr5.nnic@TMEM267 transcript541.chr5.nnic protein_coding 43483822,43479890,43476114,43453658,43444296 43483875,43479987,43476489,43454043,43446557 Gene ID= ENSG00000151881.14 TPM= 3.62 Transcript Type= NA chr5 43526267 43557079 43526267 43557079 - ENST00000306846.7@PAIP1 ENST00000306846.7 protein_coding 43556582,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43526267 43557079,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469 Gene ID= ENSG00000172239.13 TPM= 113.42 Transcript Type= protein_coding chr5 43527092 43557093 43527092 43557093 - ENST00000436644.6@PAIP1 ENST00000436644.6 protein_coding 43556819,43555830,43547728,43543004,43538924,43536819,43535534,43534853,43533738,43529786,43527092 43557093,43555999,43547913,43543116,43539035,43536944,43535640,43534970,43533792,43529879,43527469 Gene ID= ENSG00000172239.13 TPM= 55.46 Transcript Type= protein_coding chr5 43603285 43705556 43603285 43705556 + transcript564.chr5.nnic@NNT transcript564.chr5.nnic protein_coding 43603285,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018,43655840,43656653,43659171,43675511,43677725,43700119,43702621,43704255 43603487,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653213,43656073,43656813,43659350,43675670,43677806,43700237,43702736,43705556 Gene ID= ENSG00000112992.16 TPM= 9.51 Transcript Type= NA chr5 43603127 43705232 43603127 43705232 + ENST00000344920.8@NNT ENST00000344920.8 protein_coding 43603127,43609143,43612908,43615848,43619032,43624032,43628200,43644192,43644611,43645357,43649147,43650477,43651739,43653018,43655840,43656653,43659171,43675511,43677725,43700119,43702621,43704255 43603294,43609346,43613137,43616065,43619119,43624120,43628387,43644325,43644802,43645510,43649308,43650587,43651884,43653213,43656073,43656813,43659350,43675670,43677806,43700237,43702736,43705232 Gene ID= ENSG00000112992.16 TPM= 39.39 Transcript Type= protein_coding chr5 44742418 44808793 44742418 44808793 - transcript568.chr5.nic@AC093297.2 transcript568.chr5.nic antisense_RNA 44808642,44777037,44745942,44742418 44808793,44777101,44746038,44745408 Gene ID= ENSG00000251141.5 TPM= 1.81 Transcript Type= NA chr5 44808925 44815522 44808925 44815522 + ENST00000507110.5@MRPS30 ENST00000507110.5 protein_coding 44808925,44811009,44811915,44813106,44814913 44809563,44811154,44812020,44813282,44815522 Gene ID= ENSG00000112996.10 TPM= 33.51 Transcript Type= protein_coding chr5 50396192 50441367 50396192 50441367 - ENST00000303221.9@EMB ENST00000303221.9 protein_coding 50441040,50428144,50411197,50410877,50405725,50403178,50402286,50399859,50396192 50441367,50428227,50411383,50410965,50405852,50403454,50402319,50399913,50399290 Gene ID= ENSG00000170571.11 TPM= 13.58 Transcript Type= protein_coding chr5 50667901 50842335 50667901 50842335 + transcript577.chr5.nic@PARP8 transcript577.chr5.nic protein_coding 50667901,50750151,50759643,50760292,50761821,50763148,50778069,50778560,50788523,50794207,50794853,50796982,50797138,50815432,50821213,50822335,50824908,50826755,50827944,50828312,50829892,50832781,50833979,50834931,50841966 50668125,50750188,50759732,50760362,50761898,50763242,50778129,50778650,50788589,50794332,50795417,50797032,50797233,50815524,50821338,50822400,50824975,50826803,50828056,50828384,50829961,50832854,50834048,50835015,50842335 Gene ID= ENSG00000151883.17 TPM= 4.53 Transcript Type= NA chr5 52787947 52825210 52787947 52825210 + ENST00000504086.1@ITGA1 ENST00000504086.1 protein_coding 52787947,52824313 52788414,52825210 Gene ID= ENSG00000213949.8 TPM= 7.24 Transcript Type= processed_transcript chr5 52787940 52804046 52787940 52804046 + ENST00000274311.2@PELO ENST00000274311.2 protein_coding 52787940,52799885,52801409 52788414,52801120,52804046 Gene ID= ENSG00000152684.10 TPM= 142.17 Transcript Type= protein_coding chr5 52989302 53072304 52989302 53072304 + transcript595.chr5.nic@ITGA2 transcript595.chr5.nic protein_coding 52989302,53026748,53042112,53045001,53048363,53048643,53051411,53055538,53055984,53058025,53059874,53060901,53062786,53064912,53065841,53067118,53070109,53071938 52989532,53026868,53042221,53045092,53048477,53048770,53051559,53055688,53056149,53058101,53060012,53061046,53062929,53065115,53065977,53067257,53070260,53072304 Gene ID= ENSG00000164171.10 TPM= 2.26 Transcript Type= NA chr5 52989326 53094779 52989326 53094779 + ENST00000296585.9@ITGA2 ENST00000296585.9 protein_coding 52989326,53026748,53042112,53045001,53048363,53048643,53051411,53055538,53055984,53058025,53059874,53060901,53062786,53064912,53065841,53067118,53070109,53071938,53072613,53073118,53074385,53075061,53075221,53078772,53080511,53081592,53083340,53086952,53089946,53090519 52989532,53026868,53042221,53045092,53048477,53048770,53051559,53055688,53056149,53058101,53060012,53061046,53062929,53065115,53065977,53067257,53070260,53072048,53072695,53073259,53074477,53075137,53075304,53078874,53080621,53081696,53083453,53087041,53090062,53094779 Gene ID= ENSG00000164171.10 TPM= 21.28 Transcript Type= protein_coding chr5 53095679 53109771 53095679 53109771 - ENST00000361377.8@MOCS2 ENST00000361377.8 protein_coding 53109712,53108522,53107077,53102097,53100411,53095679 53109771,53108643,53107221,53102224,53100534,53098667 Gene ID= ENSG00000164172.18 TPM= 2.72 Transcript Type= protein_coding chr5 53098068 53109778 53098068 53109778 - ENST00000450852.7@MOCS2 ENST00000450852.7 protein_coding 53109712,53108522,53107077,53102097,53101359,53100411,53098068 53109778,53108643,53107221,53102224,53101509,53100534,53098667 Gene ID= ENSG00000164172.18 TPM= 91.01 Transcript Type= protein_coding chr5 53098062 53109759 53098062 53109759 - ENST00000396954.7@MOCS2 ENST00000396954.7 protein_coding 53109251,53108522,53107077,53102097,53101359,53100411,53098062 53109759,53108643,53107221,53102224,53101509,53100534,53098667 Gene ID= ENSG00000164172.18 TPM= 5.89 Transcript Type= protein_coding chr5 53109842 53115123 53109842 53115123 + ENST00000502171.2@AC008966.1 ENST00000502171.2 antisense_RNA 53109842,53112240,53113859 53110148,53113034,53115123 Gene ID= ENSG00000247796.2 TPM= 7.24 Transcript Type= antisense_RNA chr5 53109899 53115126 53109899 53115126 + ENST00000499459.2@AC008966.1 ENST00000499459.2 antisense_RNA 53109899,53112240 53110148,53115126 Gene ID= ENSG00000247796.2 TPM= 3.62 Transcript Type= antisense_RNA chr5 53480409 53487134 53480409 53487134 + ENST00000256759.7@FST ENST00000256759.7 protein_coding 53480409,53482880,53483504,53484069,53484997,53485951 53480876,53483071,53483722,53484293,53485227,53487134 Gene ID= ENSG00000134363.11 TPM= 4.53 Transcript Type= protein_coding chr5 53560635 53683340 53560635 53683340 + ENST00000296684.9@NDUFS4 ENST00000296684.9 protein_coding 53560635,53603452,53646233,53658551,53683118 53560760,53603530,53646405,53658624,53683340 Gene ID= ENSG00000164258.11 TPM= 68.37 Transcript Type= protein_coding chr5 53560647 53683338 53560647 53683338 + ENST00000506974.5@NDUFS4 ENST00000506974.5 protein_coding 53560647,53603452,53604724,53646233,53658551,53683118 53560760,53603530,53604895,53646405,53658624,53683338 Gene ID= ENSG00000164258.11 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr5 53560675 53683338 53560675 53683338 + ENST00000506765.1@NDUFS4 ENST00000506765.1 protein_coding 53560675,53603452,53646233,53683118 53560760,53603530,53646405,53683338 Gene ID= ENSG00000164258.11 TPM= 1.81 Transcript Type= protein_coding chr5 54517763 54546585 54517763 54546585 + ENST00000381410.4@SNX18 ENST00000381410.4 protein_coding 54517763,54543179 54519573,54546585 Gene ID= ENSG00000178996.13 TPM= 13.58 Transcript Type= protein_coding chr5 54977864 54985663 54977864 54985663 - ENST00000381405.4@ESM1 ENST00000381405.4 protein_coding 54985217,54981997,54977864 54985663,54982146,54979435 Gene ID= ENSG00000164283.12 TPM= 1.81 Transcript Type= protein_coding chr5 55024253 55034570 55024253 55034570 + ENST00000231009.2@GZMK ENST00000231009.2 protein_coding 55024253,55024660,55030434,55031364,55033765 55024386,55024807,55030584,55031633,55034570 Gene ID= ENSG00000113088.5 TPM= 1.81 Transcript Type= protein_coding chr5 55229327 55233608 55229327 55233608 - transcript621.chr5.nnic@CCNO transcript621.chr5.nnic protein_coding 55232856,55232361,55229327 55233608,55232546,55231860 Gene ID= ENSG00000152669.8 TPM= 1.81 Transcript Type= NA chr5 55231152 55233597 55231152 55233597 - ENST00000501463.2@CCNO ENST00000501463.2 protein_coding 55232767,55232361,55231152 55233597,55232546,55231860 Gene ID= ENSG00000152669.8 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr5 55256245 55307722 55256245 55307722 - ENST00000251636.9@DHX29 ENST00000251636.9 protein_coding 55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256245 55307722,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540 Gene ID= ENSG00000067248.9 TPM= 37.96 Transcript Type= protein_coding chr5 55256246 55307704 55256246 55307704 - transcript624.chr5.nnic@DHX29 transcript624.chr5.nnic protein_coding 55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283356,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256246 55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273377,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540 Gene ID= ENSG00000067248.9 TPM= 2.64 Transcript Type= NA chr5 55256246 55307704 55256246 55307704 - transcript625.chr5.nic@DHX29 transcript625.chr5.nic protein_coding 55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55283203,55281372,55277106,55276266,55274866,55274614,55273293,55272087,55270578,55270412,55269413,55267686,55267138,55262630,55261368,55259848,55256246 55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811,55281515,55277282,55276406,55275010,55274731,55273426,55272175,55270706,55270487,55269637,55267822,55267231,55262932,55261499,55259944,55256540 Gene ID= ENSG00000067248.9 TPM= 3.55 Transcript Type= NA chr5 55282488 55307704 55282488 55307704 - transcript632.chr5.nic@DHX29 transcript632.chr5.nic protein_coding 55307387,55298591,55297285,55296220,55295379,55294017,55290218,55289270,55285696,55285293,55282488 55307704,55298664,55297398,55296349,55295524,55294145,55290344,55289428,55285861,55285416,55283811 Gene ID= ENSG00000067248.9 TPM= 2.94 Transcript Type= NA chr5 55307760 55425581 55307760 55425581 + ENST00000230640.9@SKIV2L2 ENST00000230640.9 protein_coding 55307760,55322327,55324132,55327716,55328699,55340010,55341681,55343331,55344522,55345094,55347013,55349573,55350919,55353168,55358573,55366725,55378314,55379127,55387974,55397416,55400233,55405425,55410524,55414182,55415970,55422878,55424720 55308147,55322464,55324198,55327778,55328811,55340184,55341771,55343455,55344620,55345196,55347144,55349652,55351029,55353269,55358698,55366875,55378486,55379195,55388102,55397526,55400421,55405588,55410629,55414238,55416132,55422982,55425581 Gene ID= ENSG00000039123.15 TPM= 73.35 Transcript Type= protein_coding chr5 55424846 55534964 55424846 55534964 - transcript643.chr5.nic@PLPP1 transcript643.chr5.nic protein_coding 55534572,55467869,55441851,55425863,55424846 55534964,55468149,55441908,55426039,55425334 Gene ID= ENSG00000067113.16 TPM= 5.43 Transcript Type= NA chr5 55424885 55535050 55424885 55535050 - ENST00000307259.8@PLPP1 ENST00000307259.8 protein_coding 55534572,55475299,55467869,55441851,55425863,55424885 55535050,55475450,55468149,55441908,55426039,55425334 Gene ID= ENSG00000067113.16 TPM= 169.34 Transcript Type= protein_coding chr5 55424854 55534969 55424854 55534969 - ENST00000264775.9@PLPP1 ENST00000264775.9 protein_coding 55534572,55490960,55467869,55441851,55425863,55424854 55534969,55491114,55468149,55441908,55426039,55425334 Gene ID= ENSG00000067113.16 TPM= 8.15 Transcript Type= protein_coding chr5 55625845 55712726 55625845 55712726 - ENST00000396865.6@SLC38A9 ENST00000396865.6 protein_coding 55712217,55711452,55697846,55672563,55669758,55669557,55669228,55664693,55656715,55652529,55649207,55645789,55635544,55633754,55627891,55625845 55712726,55711499,55697992,55672695,55669879,55669620,55669321,55664863,55656774,55652723,55649314,55645895,55635657,55633902,55627980,55626659 Gene ID= ENSG00000177058.11 TPM= 3.62 Transcript Type= protein_coding chr5 55936644 55995017 55936644 55995017 - transcript650.chr5.nnic@IL6ST transcript650.chr5.nnic protein_coding 55994784,55982724,55976215,55969550,55964146,55963352,55960402,55957209,55956025,55954810,55952250,55951929,55951464,55947493,55942670,55936644 55995017,55982811,55976293,55969855,55964312,55963506,55960561,55957291,55956235,55954992,55952351,55952075,55951604,55947589,55942751,55941819 Gene ID= ENSG00000134352.19 TPM= 21.73 Transcript Type= NA chr5 56815574 56896152 56815574 56896152 + ENST00000399503.3@MAP3K1 ENST00000399503.3 protein_coding 56815574,56856600,56859715,56864734,56865340,56865829,56871910,56872641,56872825,56875032,56878980,56880711,56881083,56881570,56883527,56884664,56885932,56887378,56888226,56893531 56816055,56856750,56859915,56864934,56865456,56865977,56872031,56872722,56873005,56875310,56879101,56880802,56881272,56882866,56883679,56884826,56886063,56887520,56888357,56896152 Gene ID= ENSG00000095015.5 TPM= 5.43 Transcript Type= protein_coding chr5 56909260 56917235 56909260 56917235 + ENST00000285947.4@SETD9 ENST00000285947.4 protein_coding 56909260,56911169,56913011,56913874,56914861,56916815 56909743,56911536,56913134,56913989,56914966,56917235 Gene ID= ENSG00000155542.11 TPM= 6.34 Transcript Type= protein_coding chr5 56909332 56914638 56909332 56914638 + transcript657.chr5.nic@SETD9 transcript657.chr5.nic protein_coding 56909332,56911169,56913011,56913874 56909743,56911536,56913134,56914638 Gene ID= ENSG00000155542.11 TPM= 1.81 Transcript Type= NA chr5 57173829 57263995 57173829 57263995 + transcript660.chr5.nnic@GPBP1 transcript660.chr5.nnic protein_coding 57173829,57175448,57214074,57221376,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594 57173926,57176400,57214193,57221396,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263995 Gene ID= ENSG00000062194.15 TPM= 6.45 Transcript Type= NA chr5 57174074 57263990 57174074 57263990 + transcript662.chr5.nnic@GPBP1 transcript662.chr5.nnic protein_coding 57174074,57175448,57183797,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594 57174211,57176400,57183872,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263990 Gene ID= ENSG00000062194.15 TPM= 4.94 Transcript Type= NA chr5 57174030 57263583 57174030 57263583 + transcript667.chr5.nic@GPBP1 transcript667.chr5.nic protein_coding 57174030,57175448,57214074,57221376,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594 57174211,57176400,57214193,57221396,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263583 Gene ID= ENSG00000062194.15 TPM= 15.81 Transcript Type= NA chr5 57174117 57263082 57174117 57263082 + ENST00000506184.6@GPBP1 ENST00000506184.6 protein_coding 57174117,57175448,57214074,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594 57174211,57176400,57214193,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263082 Gene ID= ENSG00000062194.15 TPM= 44.37 Transcript Type= protein_coding chr5 57174049 57263587 57174049 57263587 + ENST00000514387.6@GPBP1 ENST00000514387.6 protein_coding 57174049,57175448,57230846,57231098,57235966,57246300,57247075,57249409,57250954,57261180,57262594 57174211,57176400,57230969,57231321,57236032,57246484,57247215,57249576,57251141,57261282,57263587 Gene ID= ENSG00000062194.15 TPM= 3.73 Transcript Type= protein_coding chr5 60751791 60844389 60751791 60844389 - ENST00000508821.5@ELOVL7 ENST00000508821.5 protein_coding 60844160,60799180,60787334,60771903,60767823,60766574,60764227,60757509,60751791 60844389,60799230,60787431,60772093,60767903,60766630,60764332,60757645,60754833 Gene ID= ENSG00000164181.13 TPM= 1.81 Transcript Type= protein_coding chr5 60751792 60844274 60751792 60844274 - ENST00000425382.5@ELOVL7 ENST00000425382.5 protein_coding 60844160,60787334,60771903,60767823,60766574,60764227,60757509,60751792 60844274,60787431,60772093,60767903,60766630,60764332,60757645,60754833 Gene ID= ENSG00000164181.13 TPM= 1.81 Transcript Type= protein_coding chr5 60873832 60945051 60873832 60945051 - ENST00000265038.9@ERCC8 ENST00000265038.9 protein_coding 60944932,60928864,60922054,60918265,60904792,60903648,60902442,60899627,60898276,60890889,60887440,60873832 60945051,60928959,60922155,60918388,60904873,60903716,60902508,60899727,60898400,60891086,60887520,60874683 Gene ID= ENSG00000049167.13 TPM= 8.15 Transcript Type= protein_coding chr5 60945177 61153025 60945177 61153025 + transcript693.chr5.nnic@NDUFAF2 transcript693.chr5.nnic protein_coding 60945177,61073125,61098992,61152704 60945428,61073214,61099032,61153025 Gene ID= ENSG00000164182.10 TPM= 2.26 Transcript Type= NA chr5 60945129 61153037 60945129 61153037 + ENST00000296597.9@NDUFAF2 ENST00000296597.9 protein_coding 60945129,61073125,61098992,61152704 60945382,61073214,61099032,61153037 Gene ID= ENSG00000164182.10 TPM= 24 Transcript Type= protein_coding chr5 61157709 61162474 61157709 61162474 - ENST00000339020.7@SMIM15 ENST00000339020.7 protein_coding 61162217,61161088,61157709 61162474,61161227,61160199 Gene ID= ENSG00000188725.7 TPM= 87.84 Transcript Type= protein_coding chr5 62306148 62388740 62306148 62388740 + transcript701.chr5.nic@KIF2A transcript701.chr5.nic protein_coding 62306148,62347130,62348048,62350066,62352588,62353275,62355159,62357691,62358137,62361242,62361466,62362450,62363178,62363695,62365243,62366414,62373687,62377661,62381118,62385484 62306536,62347224,62348167,62350120,62352653,62353375,62355254,62357745,62358299,62361332,62361529,62362541,62363320,62363899,62365353,62366481,62373837,62377762,62381253,62388740 Gene ID= ENSG00000068796.16 TPM= 2.72 Transcript Type= NA chr5 62412767 62628577 62412767 62628577 + ENST00000325324.10@IPO11 ENST00000325324.10 protein_coding 62412767,62437274,62442983,62449927,62451730,62467131,62470250,62474416,62476683,62483101,62484010,62485419,62487771,62489302,62490115,62493998,62504667,62504858,62506241,62515388,62526142,62530709,62536702,62537209,62550367,62551223,62561136,62591577,62601764,62627154 62412929,62437417,62443083,62449999,62451933,62467263,62470308,62474464,62476753,62483293,62484162,62485462,62487861,62489349,62490220,62494124,62504700,62504898,62506357,62515501,62526257,62530785,62536781,62537289,62550462,62551336,62561257,62591672,62601848,62628577 Gene ID= ENSG00000086200.16 TPM= 10.87 Transcript Type= protein_coding chr5 62578821 62628582 62578821 62628582 + ENST00000409534.1@IPO11 ENST00000409534.1 protein_coding 62578821,62591577,62601764,62627154 62578935,62591672,62601848,62628582 Gene ID= ENSG00000086200.16 TPM= 1.81 Transcript Type= protein_coding chr5 64718144 64768685 64718144 64768685 - ENST00000513458.8@SREK1IP1 ENST00000513458.8 protein_coding 64768505,64754315,64741057,64728107,64718144 64768685,64754362,64741200,64728179,64724573 Gene ID= ENSG00000153006.15 TPM= 20.83 Transcript Type= protein_coding chr5 64768931 65008148 64768931 65008148 + transcript722.chr5.nnic@CWC27 transcript722.chr5.nnic protein_coding 64768931,64774691,64781921,64783836,64785481,64786524,64788951,64800248,64801302,64804229,64885443,64971703,64977135,65007649 64769188,64774787,64782033,64783979,64785579,64786627,64789020,64800327,64801332,64804386,64885546,64971812,64977238,65008148 Gene ID= ENSG00000153015.15 TPM= 2.72 Transcript Type= NA chr5 64768930 65018763 64768930 65018763 + ENST00000381070.7@CWC27 ENST00000381070.7 protein_coding 64768930,64774691,64781921,64783836,64785481,64786524,64788951,64800248,64801302,64804229,64885443,64971703,64977135,65018159 64769188,64774787,64782033,64783979,64785579,64786627,64789020,64800327,64801332,64804386,64885546,64971812,64977238,65018763 Gene ID= ENSG00000153015.15 TPM= 23.54 Transcript Type= protein_coding chr5 65563239 65587549 65563239 65587549 + ENST00000261308.9@PPWD1 ENST00000261308.9 protein_coding 65563239,65567513,65569632,65569878,65571839,65576879,65579424,65583038,65585014,65585999,65587253 65563506,65567615,65569732,65569998,65572286,65577069,65579613,65583219,65585095,65586181,65587549 Gene ID= ENSG00000113593.11 TPM= 22.64 Transcript Type= protein_coding chr5 65589680 65624646 65589680 65624646 - ENST00000231524.13@TRIM23 ENST00000231524.13 protein_coding 65624194,65618093,65614098,65611603,65610861,65609243,65604911,65597051,65596421,65594521,65589680 65624646,65618255,65614219,65611881,65611043,65609458,65605045,65597180,65596531,65594645,65591948 Gene ID= ENSG00000113595.14 TPM= 45.28 Transcript Type= protein_coding chr5 65625040 65666069 65625040 65666069 + ENST00000231526.8@TRAPPC13 ENST00000231526.8 protein_coding 65625040,65635301,65635944,65637696,65647055,65650810,65652501,65658368,65660699,65662050,65664237,65664504 65625106,65635369,65636043,65637780,65647182,65650882,65652545,65658501,65660897,65662150,65664384,65666069 Gene ID= ENSG00000113597.17 TPM= 5.43 Transcript Type= protein_coding chr5 65722212 65824683 65722212 65824683 + transcript738.chr5.nnic@NLN transcript738.chr5.nnic protein_coding 65722212,65752590,65758567,65762960,65777427,65780179,65781261,65785775,65788118,65792454,65809515,65810037,65812255,65822781 65722414,65752663,65758826,65763108,65777534,65780281,65781421,65785910,65788484,65792655,65809701,65810165,65812391,65824683 Gene ID= ENSG00000123213.22 TPM= 1.81 Transcript Type= NA chr5 65926556 66080516 65926556 66080516 + ENST00000380943.6@ERBIN ENST00000380943.6 protein_coding 65926556,65988635,65992710,65994747,66012049,66013549,66014669,66021322,66023290,66024306,66025480,66025848,66026302,66028274,66038383,66043077,66044137,66046353,66048667,66050783,66053406,66075024,66076316,66076875,66078423 65926806,65988682,65992907,65994864,66012127,66013638,66014725,66021385,66023364,66024450,66025552,66025977,66026417,66028343,66038482,66043198,66044310,66046538,66048781,66050966,66054951,66075230,66076408,66076949,66080516 Gene ID= ENSG00000112851.14 TPM= 9.96 Transcript Type= protein_coding chr5 66144218 66157738 66144218 66157738 + ENST00000612404.4@SREK1 ENST00000612404.4 protein_coding 66144218,66153463,66156065 66144537,66153596,66157738 Gene ID= ENSG00000153914.15 TPM= 1.81 Transcript Type= protein_coding chr5 67004910 67163186 67004910 67163186 + transcript758.chr5.nnic@MAST4 transcript758.chr5.nnic protein_coding 67004910,67054402,67090162,67095595,67100435,67102534,67104364,67110096,67114084,67118682,67121017,67130210,67131811,67133514,67134523,67136563,67142115,67142421,67144669,67145144,67152635,67153458,67160456,67162607,67163145 67005085,67054492,67090231,67095675,67100592,67102611,67104575,67110199,67114219,67118749,67121102,67130418,67131951,67133646,67134688,67136664,67142237,67142533,67144796,67145379,67152866,67153580,67160592,67162788,67163186 Gene ID= ENSG00000069020.18 TPM= 3.62 Transcript Type= NA chr5 66596395 66930963 66596395 66930963 + transcript763.chr5.nic@MAST4 transcript763.chr5.nic protein_coding 66596395,66759709,66788670,66899951,66930747 66597018,66759862,66788794,66899982,66930963 Gene ID= ENSG00000069020.18 TPM= 1.81 Transcript Type= NA chr5 67179613 67196799 67179613 67196799 - ENST00000256447.5@CD180 ENST00000256447.5 protein_coding 67196552,67185851,67179613 67196799,67186017,67184585 Gene ID= ENSG00000134061.5 TPM= 4.53 Transcript Type= protein_coding chr5 68215720 68301821 68215720 68301821 + ENST00000521381.5@PIK3R1 ENST00000521381.5 protein_coding 68215720,68226290,68273390,68273939,68279602,68280528,68280927,68292259,68293101,68293303,68293709,68294536,68295148,68295420,68296171,68297412 68215949,68227009,68273482,68274013,68279733,68280729,68281006,68292361,68293199,68293483,68293834,68294678,68295324,68295488,68296341,68301821 Gene ID= ENSG00000145675.14 TPM= 9.06 Transcript Type= protein_coding chr5 69028309 69043898 69028309 69043898 - transcript775.chr5.nnic@AC010273.2 transcript775.chr5.nnic lincRNA 69043443,69038519,69028309 69043898,69038576,69030163 Gene ID= ENSG00000250237.1 TPM= 1.81 Transcript Type= NA chr5 69094065 69130264 69094065 69130264 + transcript777.chr5.nnic@SLC30A5 transcript777.chr5.nnic protein_coding 69094065,69100807,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447 69094338,69100929,69103128,69104716,69108436,69113227,69114496,69115407,69116189,69116435,69117396,69118628,69121895,69123425,69128132,69130264 Gene ID= ENSG00000145740.18 TPM= 1.81 Transcript Type= NA chr5 69093646 69131069 69093646 69131069 + ENST00000396591.7@SLC30A5 ENST00000396591.7 protein_coding 69093646,69100807,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447 69094338,69100929,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69131069 Gene ID= ENSG00000145740.18 TPM= 40.45 Transcript Type= protein_coding chr5 69094026 69130264 69094026 69130264 + transcript783.chr5.nic@SLC30A5 transcript783.chr5.nic protein_coding 69094026,69103062,69104631,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447 69094338,69103128,69104716,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69130264 Gene ID= ENSG00000145740.18 TPM= 4.23 Transcript Type= NA chr5 69094083 69130264 69094083 69130264 + transcript786.chr5.nic@SLC30A5 transcript786.chr5.nic protein_coding 69094083,69103062,69108349,69113140,69114420,69115237,69115926,69116394,69117239,69118499,69121694,69123199,69128004,69129447 69094338,69103128,69108436,69113227,69114496,69115407,69116214,69116602,69117396,69118628,69121895,69123425,69128132,69130264 Gene ID= ENSG00000145740.18 TPM= 2.42 Transcript Type= NA chr5 69093991 69104740 69093991 69104740 + ENST00000380860.8@SLC30A5 ENST00000380860.8 protein_coding 69093991,69100807,69103062,69103962 69094338,69100929,69103128,69104740 Gene ID= ENSG00000145740.18 TPM= 8.15 Transcript Type= protein_coding chr5 69167010 69178245 69167010 69178245 + ENST00000256442.9@CCNB1 ENST00000256442.9 protein_coding 69167010,69167908,69168173,69171270,69174251,69174877,69175397,69177239,69177524 69167283,69168078,69168343,69171452,69174409,69175113,69175537,69177349,69178245 Gene ID= ENSG00000134057.14 TPM= 9.96 Transcript Type= protein_coding chr5 69189548 69210357 69189548 69210357 + ENST00000283006.6@CENPH ENST00000283006.6 protein_coding 69189548,69191795,69194647,69195717,69197053,69202506,69202919,69208196,69209707 69189768,69191850,69194695,69195791,69197109,69202569,69202970,69208359,69210357 Gene ID= ENSG00000153044.9 TPM= 2.72 Transcript Type= protein_coding chr5 69217760 69230129 69217760 69230129 + ENST00000256441.4@MRPS36 ENST00000256441.4 protein_coding 69217760,69226338,69228200,69229208 69217871,69226401,69228387,69230129 Gene ID= ENSG00000134056.11 TPM= 34.41 Transcript Type= protein_coding chr5 69350984 69369542 69350984 69369542 - ENST00000380822.8@AK6 ENST00000380822.8 protein_coding 69369463,69366503,69355895,69355649,69350984 69369542,69366595,69355953,69355794,69352253 Gene ID= ENSG00000085231.13 TPM= 40.75 Transcript Type= protein_coding chr5 69351726 69370013 69351726 69370013 - ENST00000380818.7@AK6 ENST00000380818.7 protein_coding 69369657,69366503,69355895,69355649,69351726 69370013,69366595,69355953,69355794,69352253 Gene ID= ENSG00000085231.13 TPM= 3.62 Transcript Type= protein_coding chr5 69364745 69369642 69364745 69369642 - ENST00000217893.9@TAF9 ENST00000217893.9 protein_coding 69369463,69366503,69364745 69369642,69366595,69365754 Gene ID= ENSG00000273841.4 TPM= 54.33 Transcript Type= protein_coding chr5 69369825 69414801 69369825 69414801 + ENST00000354312.7@RAD17 ENST00000354312.7 protein_coding 69369825,69371035,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031 69369933,69371171,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801 Gene ID= ENSG00000152942.18 TPM= 14.94 Transcript Type= protein_coding chr5 69369812 69414801 69369812 69414801 + ENST00000354868.9@RAD17 ENST00000354868.9 protein_coding 69369812,69371035,69371454,69372034,69373830,69374628,69381901,69384797,69386043,69386180,69386396,69389034,69391831,69393155,69393354,69396397,69400049,69410493,69414031 69369933,69371171,69371557,69372217,69374087,69374711,69382057,69384933,69386095,69386305,69386465,69389145,69392013,69393240,69393500,69396546,69400169,69410550,69414801 Gene ID= ENSG00000152942.18 TPM= 2.26 Transcript Type= protein_coding chr5 69560209 69592530 69560209 69592530 + transcript825.chr5.nic@GTF2H2C transcript825.chr5.nic protein_coding 69560209,69562673,69565100,69566131,69566589,69566967,69567727,69568153,69572445,69578712,69579021,69579757,69582366,69585594,69586254,69590328,69592079 69560242,69562770,69565188,69566208,69566625,69567053,69567777,69568207,69572550,69578802,69579108,69579864,69582429,69585697,69586356,69590367,69592530 Gene ID= ENSG00000183474.15 TPM= 1.81 Transcript Type= NA chr5 69560191 69592530 69560191 69592530 + transcript827.chr5.nic@GTF2H2C transcript827.chr5.nic protein_coding 69560191,69565100,69566131,69566589,69566967,69567727,69568153,69572445,69578712,69579021,69579757,69582366,69585594,69586254,69590328,69592079 69560242,69565188,69566208,69566625,69567053,69567777,69568207,69572550,69578802,69579108,69579864,69582429,69585697,69586356,69590367,69592530 Gene ID= ENSG00000183474.15 TPM= 3.62 Transcript Type= NA chr5 70025231 70043110 70025231 70043110 + transcript834.chr5.nnic@SERF1B transcript834.chr5.nnic protein_coding 70025231,70026407,70041524,70042536 70025458,70026515,70042251,70043110 Gene ID= ENSG00000205572.9 TPM= 5.43 Transcript Type= NA chr5 70025247 70032696 70025247 70032696 + ENST00000380751.9@SERF1B ENST00000380751.9 protein_coding 70025247,70026407,70032315 70025458,70026515,70032696 Gene ID= ENSG00000205572.9 TPM= 20.83 Transcript Type= protein_coding chr5 70049650 70121004 70049650 70121004 + transcript833.chr5.nnic@SMN2 transcript833.chr5.nnic protein_coding 70049650,70063415,70065965,70066934,70067294,70069235,70070641,70090462,70120305 70049766,70063486,70066084,70067134,70067446,70069330,70070751,70090528,70121004 Gene ID= ENSG00000205571.13 TPM= 1.81 Transcript Type= NA chr5 70900665 70908375 70900665 70908375 + ENST00000317633.13@SERF1A ENST00000317633.13 protein_coding 70900665,70901825,70907734 70900876,70901933,70908375 Gene ID= ENSG00000172058.15 TPM= 17.21 Transcript Type= protein_coding chr5 70900978 70908115 70900978 70908115 + ENST00000507348.5@SERF1A ENST00000507348.5 protein_coding 70900978,70901825,70907734 70901149,70901933,70908115 Gene ID= ENSG00000172058.15 TPM= 4.53 Transcript Type= protein_coding chr5 70925030 70953012 70925030 70953012 + ENST00000380707.8@SMN1 ENST00000380707.8 protein_coding 70925030,70938839,70941389,70942358,70942718,70944658,70946066,70951941,70952439 70925184,70938910,70941508,70942558,70942870,70944753,70946176,70951994,70953012 Gene ID= ENSG00000172062.16 TPM= 13.58 Transcript Type= protein_coding chr5 71053742 71067688 71053742 71067688 - transcript845.chr5.nnic@GTF2H2 transcript845.chr5.nnic protein_coding 71067655,71065125,71062708,71061688,71061272,71060844,71060120,71059690,71053742 71067688,71065222,71062796,71061765,71061308,71060930,71060170,71059744,71055457 Gene ID= ENSG00000145736.14 TPM= 1.81 Transcript Type= NA chr5 71455615 71567820 71455615 71567820 + ENST00000358731.8@BDP1 ENST00000358731.8 protein_coding 71455615,71458579,71461817,71464058,71466096,71467354,71470395,71483842,71486484,71489404,71490984,71495250,71497270,71501562,71502599,71504621,71509465,71512241,71513185,71514944,71516061,71517322,71522289,71522756,71523939,71532308,71539042,71539557,71541454,71542105,71544357,71545039,71548682,71549420,71553116,71556886,71559982,71562274,71564754 71456089,71458855,71461926,71464117,71466221,71467487,71470489,71483896,71486627,71489682,71491131,71495408,71497426,71501653,71502791,71504751,71511151,71512428,71513407,71515122,71516271,71517452,71522490,71522949,71524323,71532427,71539078,71539649,71541682,71542265,71544507,71545219,71548745,71549606,71553320,71556925,71560237,71562520,71567820 Gene ID= ENSG00000145734.18 TPM= 1.81 Transcript Type= protein_coding chr5 71587246 71658708 71587246 71658708 + transcript860.chr5.nic@MCCC2 transcript860.chr5.nic protein_coding 71587246,71592926,71596280,71599659,71602506,71604356,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743 71587554,71592992,71596364,71599760,71602633,71604468,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658708 Gene ID= ENSG00000131844.15 TPM= 12.68 Transcript Type= NA chr5 71587297 71658704 71587297 71658704 + ENST00000340941.10@MCCC2 ENST00000340941.10 protein_coding 71587297,71592926,71596280,71599659,71602506,71604356,71626640,71632121,71634943,71635151,71641003,71643819,71646211,71649097,71650069,71652669,71656743 71587554,71592992,71596364,71599760,71602633,71604468,71626753,71632185,71635042,71635246,71641075,71643895,71646277,71649253,71650183,71652754,71658704 Gene ID= ENSG00000131844.15 TPM= 68.82 Transcript Type= protein_coding chr5 72219409 72320261 72219409 72320261 - ENST00000261413.9@MRPS27 ENST00000261413.9 protein_coding 72320149,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219409 72320261,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148 Gene ID= ENSG00000113048.16 TPM= 155.98 Transcript Type= protein_coding chr5 72219528 72320255 72219528 72320255 - ENST00000457646.8@MRPS27 ENST00000457646.8 protein_coding 72320181,72314081,72297632,72295531,72238014,72234119,72232443,72228266,72226057,72223683,72219528 72320255,72314158,72297702,72295589,72238128,72234197,72232558,72228368,72226199,72223850,72221148 Gene ID= ENSG00000113048.16 TPM= 7.47 Transcript Type= protein_coding chr5 72320367 72368395 72320367 72368395 + ENST00000380639.9@PTCD2 ENST00000380639.9 protein_coding 72320367,72322172,72326612,72331258,72335018,72335794,72338622,72342962,72352641,72358203 72320509,72322264,72326741,72331375,72335096,72335885,72338735,72343036,72352754,72368395 Gene ID= ENSG00000049883.14 TPM= 15.39 Transcript Type= protein_coding chr5 72320367 72359352 72320367 72359352 + ENST00000543322.5@PTCD2 ENST00000543322.5 protein_coding 72320367,72322172,72326612,72331258,72335794,72338622,72342962,72352641,72358203 72320509,72322264,72326741,72331375,72335885,72338735,72343036,72352754,72359352 Gene ID= ENSG00000049883.14 TPM= 1.81 Transcript Type= protein_coding chr5 72816312 72916733 72816312 72916733 + ENST00000337273.9@TNPO1 ENST00000337273.9 protein_coding 72816312,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709 72816752,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72916733 Gene ID= ENSG00000083312.17 TPM= 14.49 Transcript Type= protein_coding chr5 72848184 72908951 72848184 72908951 + ENST00000506351.6@TNPO1 ENST00000506351.6 protein_coding 72848184,72848385,72851244,72855774,72861808,72865596,72872639,72875615,72877228,72882467,72883064,72887070,72888078,72889786,72891810,72893139,72893377,72893616,72896458,72897056,72900006,72900974,72903709,72905303,72908709 72848251,72848498,72851319,72855923,72861914,72865729,72872720,72875737,72877346,72882527,72883232,72887222,72888303,72889957,72891896,72893246,72893535,72893703,72896556,72897151,72900081,72901073,72903783,72905445,72908951 Gene ID= ENSG00000083312.17 TPM= 3.62 Transcript Type= protein_coding chr5 72955981 73090522 72955981 73090522 + ENST00000430046.6@FCHO2 ENST00000430046.6 protein_coding 72955981,72968498,72989427,72990478,72990712,73006445,73015626,73017212,73034657,73037143,73041291,73051349,73052332,73054160,73054525,73056065,73058433,73063841,73068650,73074742,73077338,73078180,73081783,73082761,73087589,73088068 72956129,72968589,72989501,72990619,72990864,73006549,73015724,73017308,73034701,73037215,73041315,73051406,73052507,73054171,73054549,73056107,73058524,73063944,73068779,73074853,73077493,73078312,73081982,73082825,73087753,73090522 Gene ID= ENSG00000157107.13 TPM= 21.73 Transcript Type= protein_coding chr5 73498408 73505495 73498408 73505495 + ENST00000335895.12@BTF3 ENST00000335895.12 protein_coding 73498408,73499134,73502488,73502916,73504347,73505192 73498558,73499202,73502601,73503117,73504403,73505495 Gene ID= ENSG00000145741.15 TPM= 298.83 Transcript Type= protein_coding chr5 73552325 73565641 73552325 73565641 - transcript897.chr5.nic@ANKRA2 transcript897.chr5.nic protein_coding 73565132,73562580,73561130,73557575,73555488,73554861,73554322,73553406,73552325 73565641,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852 Gene ID= ENSG00000164331.9 TPM= 2.72 Transcript Type= NA chr5 73552335 73565686 73552335 73565686 - ENST00000296785.7@ANKRA2 ENST00000296785.7 protein_coding 73565132,73562593,73561130,73557575,73555488,73554861,73554322,73553406,73552335 73565686,73562985,73561288,73557640,73555585,73554986,73554388,73553486,73552852 Gene ID= ENSG00000164331.9 TPM= 30.79 Transcript Type= protein_coding chr5 73565741 73581969 73565741 73581969 + ENST00000296792.8@UTP15 ENST00000296792.8 protein_coding 73565741,73567262,73568235,73568420,73569497,73570586,73572489,73576952,73577856,73578751,73579017,73579317,73579877 73565912,73567434,73568327,73568604,73569675,73570711,73572624,73577036,73578005,73578852,73579150,73579375,73581969 Gene ID= ENSG00000164338.9 TPM= 4.53 Transcript Type= protein_coding chr5 73626131 73911038 73626131 73911038 + transcript910.chr5.nic@ARHGEF28 transcript910.chr5.nic protein_coding 73626131,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412 73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73911038 Gene ID= ENSG00000214944.9 TPM= 2.72 Transcript Type= NA chr5 73626196 73901527 73626196 73901527 + transcript912.chr5.nic@ARHGEF28 transcript912.chr5.nic protein_coding 73626196,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184 73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901527 Gene ID= ENSG00000214944.9 TPM= 2.72 Transcript Type= NA chr5 73626158 73941992 73626158 73941992 + ENST00000513042.6@ARHGEF28 ENST00000513042.6 protein_coding 73626158,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275,73940844 73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911575,73941992 Gene ID= ENSG00000214944.9 TPM= 26.26 Transcript Type= protein_coding chr5 73626158 73941992 73626158 73941992 + ENST00000545377.5@ARHGEF28 ENST00000545377.5 protein_coding 73626158,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275,73923087,73940844 73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911575,73923164,73941992 Gene ID= ENSG00000214944.9 TPM= 8.15 Transcript Type= protein_coding chr5 73626158 73911697 73626158 73911697 + ENST00000296794.10@ARHGEF28 ENST00000296794.10 protein_coding 73626158,73684841,73749837,73752909,73773855,73776516,73780676,73794402,73795331,73832338,73840480,73846268,73848976,73852650,73857656,73858087,73864817,73865965,73867876,73868100,73870069,73872999,73882472,73883767,73885850,73887603,73892052,73893197,73894393,73897962,73901184,73904222,73904358,73909412,73911275 73626322,73684884,73749984,73753202,73774038,73776696,73780745,73794454,73795391,73832459,73840760,73846475,73849087,73852692,73857779,73858219,73864872,73866013,73868020,73868227,73870209,73873246,73882594,73883884,73886104,73887679,73892230,73893288,73894575,73898093,73901284,73904260,73904405,73909897,73911697 Gene ID= ENSG00000214944.9 TPM= 6.34 Transcript Type= protein_coding chr5 74685144 74721288 74685144 74721288 + ENST00000261416.11@HEXB ENST00000261416.11 protein_coding 74685144,74689328,74693639,74696693,74696996,74705219,74713506,74715510,74716587,74718291,74718797,74720428,74720643,74721118 74685559,74689473,74693704,74696739,74697106,74705320,74713635,74715690,74716673,74718363,74718971,74720518,74720747,74721288 Gene ID= ENSG00000049860.13 TPM= 182.01 Transcript Type= protein_coding chr5 74685196 74706168 74685196 74706168 + ENST00000513079.5@HEXB ENST00000513079.5 protein_coding 74685196,74689328,74693639,74696693,74696996,74705219 74685559,74689473,74693704,74696739,74697106,74706168 Gene ID= ENSG00000049860.13 TPM= 2.72 Transcript Type= retained_intron chr5 74721204 74767371 74721204 74767371 - ENST00000296805.7@GFM2 ENST00000296805.7 protein_coding 74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74730260,74725941,74725640,74722379,74721204 74767371,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74730398,74726126,74725755,74722561,74721783 Gene ID= ENSG00000164347.17 TPM= 57.95 Transcript Type= protein_coding chr5 74721264 74767142 74721264 74767142 - transcript923.chr5.nic@GFM2 transcript923.chr5.nic protein_coding 74766938,74763680,74760902,74759369,74758849,74751368,74750579,74747692,74746105,74745678,74741529,74739989,74738502,74738318,74736796,74733022,74725941,74725640,74722379,74721264 74767142,74763766,74760986,74759426,74758946,74751493,74750667,74747780,74746165,74745857,74741609,74740137,74738642,74738417,74736985,74733098,74726126,74725755,74722561,74721783 Gene ID= ENSG00000164347.17 TPM= 2.72 Transcript Type= NA chr5 74766992 74780113 74766992 74780113 + ENST00000610426.4@NSA2 ENST00000610426.4 protein_coding 74766992,74768931,74769214,74770631,74773868,74776604 74767363,74769118,74769364,74770810,74774060,74780113 Gene ID= ENSG00000164346.9 TPM= 12.68 Transcript Type= protein_coding chr5 74777601 74866673 74777601 74866673 - transcript935.chr5.nic@FAM169A transcript935.chr5.nic protein_coding 74866165,74841545,74840074,74838965,74834426,74813840,74805156,74804493,74801590,74800880,74796030,74782931,74777601 74866673,74841679,74840173,74839050,74834597,74814019,74805284,74804605,74801629,74801030,74796186,74783134,74782008 Gene ID= ENSG00000198780.11 TPM= 2.72 Transcript Type= NA chr5 75337192 75363004 75337192 75363004 + transcript946.chr5.nnic@HMGCR transcript946.chr5.nnic protein_coding 75337192,75342583,75343853,75344245,75345574,75347204,75350042,75350258,75350789,75351068,75351517,75354503,75355365,75356343,75358657,75359170,75359398,75359985,75360288 75337300,75342770,75343964,75344332,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355522,75356448,75358827,75359310,75359556,75360139,75363004 Gene ID= ENSG00000113161.15 TPM= 2.72 Transcript Type= NA chr5 75337168 75362104 75337168 75362104 + ENST00000287936.8@HMGCR ENST00000287936.8 protein_coding 75337168,75342583,75343853,75344245,75345574,75347204,75350042,75350258,75350789,75351068,75351424,75354503,75355056,75355365,75356343,75358657,75359170,75359398,75359985,75360288 75337300,75342770,75343964,75344332,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355214,75355522,75356448,75358827,75359310,75359556,75360139,75362104 Gene ID= ENSG00000113161.15 TPM= 89.65 Transcript Type= protein_coding chr5 75337232 75361423 75337232 75361423 + ENST00000343975.9@HMGCR ENST00000343975.9 protein_coding 75337232,75342583,75343853,75344245,75345574,75347204,75350042,75350258,75350789,75351068,75351424,75354503,75355365,75356343,75358657,75359170,75359398,75359985,75360288 75337300,75342770,75343964,75344332,75345658,75347309,75350148,75350374,75350949,75351315,75351602,75354697,75355522,75356448,75358827,75359310,75359556,75360139,75361423 Gene ID= ENSG00000113161.15 TPM= 6.34 Transcript Type= protein_coding chr5 75511756 75601144 75511756 75601144 + ENST00000241436.8@POLK ENST00000241436.8 protein_coding 75511756,75547010,75552472,75569340,75573738,75576780,75581209,75583293,75584760,75587026,75590344,75593878,75596222,75597747,75597934 75511914,75547157,75552591,75569492,75573869,75576933,75581448,75583417,75584926,75587058,75590440,75594049,75597178,75597789,75601144 Gene ID= ENSG00000122008.15 TPM= 11.77 Transcript Type= protein_coding chr5 75674124 75717481 75674124 75717481 - ENST00000428202.6@POC5 ENST00000428202.6 protein_coding 75717306,75712854,75707737,75705704,75702605,75694655,75692396,75690383,75689012,75685207,75677774,75674124 75717481,75712951,75707875,75705787,75702810,75694831,75692500,75690562,75689165,75685484,75677950,75674578 Gene ID= ENSG00000152359.14 TPM= 2.72 Transcript Type= protein_coding chr5 75674208 75717464 75674208 75717464 - transcript956.chr5.nic@POC5 transcript956.chr5.nic protein_coding 75717306,75712854,75705704,75702605,75694655,75692396,75690383,75689012,75685207,75677774,75674208 75717464,75712951,75705787,75702810,75694831,75692500,75690562,75689165,75685484,75677950,75674578 Gene ID= ENSG00000152359.14 TPM= 1.81 Transcript Type= NA chr5 76561837 76708130 76561837 76708130 + transcript962.chr5.nnic@IQGAP2 transcript962.chr5.nnic protein_coding 76561837,76562396,76570580,76575693,76588906,76589615,76590408,76592838,76597439,76600812,76606179,76611020,76627410,76631859,76637034,76640933,76652750,76654200,76654934,76658459,76665026,76668681,76671759,76673449,76673952,76674477,76677218,76683115,76683776,76693355,76695454,76697987,76701076,76702482,76707200 76561953,76562552,76570657,76575769,76588973,76589728,76590586,76592925,76597602,76600972,76606303,76611183,76627500,76632026,76637176,76641103,76652833,76654271,76655003,76658667,76665175,76668844,76671983,76673589,76674036,76674709,76677350,76683217,76683917,76693442,76695666,76698147,76701213,76702590,76708130 Gene ID= ENSG00000145703.15 TPM= 4.98 Transcript Type= NA chr5 76403249 76708132 76403249 76708132 + ENST00000274364.10@IQGAP2 ENST00000274364.10 protein_coding 76403249,76461570,76562396,76570580,76575693,76588906,76589615,76590408,76592838,76597439,76600812,76606179,76611020,76627410,76631859,76637034,76640933,76652750,76654200,76654934,76658459,76665026,76668681,76671759,76673449,76673952,76674477,76677218,76683115,76683776,76693355,76695454,76697987,76701076,76702482,76707200 76403591,76461669,76562552,76570657,76575769,76588973,76589728,76590586,76592925,76597602,76600972,76606303,76611183,76627500,76632026,76637176,76641103,76652833,76654271,76655003,76658667,76665175,76668844,76671983,76673589,76674036,76674709,76677350,76683217,76683917,76693442,76695666,76698147,76701213,76702590,76708132 Gene ID= ENSG00000145703.15 TPM= 26.71 Transcript Type= protein_coding chr5 76715776 76736111 76715776 76736111 + transcript965.chr5.nnic@F2R transcript965.chr5.nnic protein_coding 76715776,76716115,76732314 76715935,76716395,76736111 Gene ID= ENSG00000181104.6 TPM= 2.72 Transcript Type= NA chr5 76716043 76735781 76716043 76735781 + ENST00000319211.4@F2R ENST00000319211.4 protein_coding 76716043,76732314 76716395,76735781 Gene ID= ENSG00000181104.6 TPM= 57.05 Transcript Type= protein_coding chr5 76818977 76835315 76818977 76835315 + ENST00000296677.4@F2RL1 ENST00000296677.4 protein_coding 76818977,76832690 76819264,76835315 Gene ID= ENSG00000164251.4 TPM= 10.87 Transcript Type= protein_coding chr5 76952713 76969474 76952713 76969474 + ENST00000274368.8@CRHBP ENST00000274368.8 protein_coding 76952713,76953601,76954029,76955653,76958741,76963343,76968728 76953215,76953694,76954186,76955863,76958889,76963460,76969474 Gene ID= ENSG00000145708.10 TPM= 38.94 Transcript Type= protein_coding chr5 77030385 77065234 77030385 77065234 + ENST00000312916.11@AGGF1 ENST00000312916.11 protein_coding 77030385,77034418,77035541,77036556,77039531,77046347,77048161,77048936,77052706,77053965,77055514,77059616,77061703,77063052 77030976,77034520,77035743,77036720,77039719,77046677,77048272,77048987,77052807,77054130,77055596,77059743,77061802,77065234 Gene ID= ENSG00000164252.12 TPM= 25.36 Transcript Type= protein_coding chr5 77210881 77429807 77210881 77429807 + ENST00000264917.9@PDE8B ENST00000264917.9 protein_coding 77210881,77311994,77325539,77328998,77331402,77337227,77344853,77349419,77351065,77353346,77400248,77404720,77407381,77408893,77411676,77412100,77413111,77418229,77419767,77421821,77425767,77426445 77211264,77312053,77325729,77329057,77331459,77337315,77344931,77349559,77351153,77353406,77400290,77404797,77407457,77409057,77411721,77412235,77413309,77418446,77419887,77421988,77425896,77429807 Gene ID= ENSG00000113231.13 TPM= 5.43 Transcript Type= protein_coding chr5 77432246 77492540 77432246 77492540 - transcript983.chr5.nic@WDR41 transcript983.chr5.nic protein_coding 77492170,77489457,77464761,77463095,77459062,77453817,77451291,77449760,77440813,77438240,77437336,77436261,77432246 77492540,77489557,77464809,77463226,77459124,77453928,77451353,77449870,77440997,77438361,77437424,77436394,77433287 Gene ID= ENSG00000164253.13 TPM= 5.43 Transcript Type= NA chr5 77691166 77776361 77691166 77776361 - ENST00000380377.8@TBCA ENST00000380377.8 protein_coding 77776205,77708242,77693266,77691166 77776361,77708347,77693352,77691498 Gene ID= ENSG00000171530.13 TPM= 153.04 Transcript Type= protein_coding chr5 77691248 77776293 77691248 77776293 - ENST00000520361.5@TBCA ENST00000520361.5 protein_coding 77776205,77708242,77691248 77776293,77708347,77691498 Gene ID= ENSG00000171530.13 TPM= 2.72 Transcript Type= protein_coding chr5 78002326 78294743 78002326 78294743 - transcript991.chr5.nnic@AP3B1 transcript991.chr5.nnic protein_coding 78294452,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78121712,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78002326 78294743,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78121873,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055 Gene ID= ENSG00000132842.13 TPM= 2.26 Transcript Type= NA chr5 78000525 78294755 78000525 78294755 - ENST00000255194.10@AP3B1 ENST00000255194.10 protein_coding 78294452,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78020692,78015410,78000525 78294755,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78020789,78015548,78003055 Gene ID= ENSG00000132842.13 TPM= 67.46 Transcript Type= protein_coding chr5 78002326 78294743 78002326 78294743 - transcript995.chr5.nnic@AP3B1 transcript995.chr5.nnic protein_coding 78294452,78267520,78240862,78228144,78227372,78225542,78216055,78181507,78177339,78175784,78175626,78165610,78162819,78156258,78141143,78129121,78128030,78116126,78113752,78110207,78100953,78089393,78039043,78034361,78015410,78002326 78294743,78267595,78240936,78228239,78227532,78225608,78216237,78181662,78177436,78175838,78175697,78165672,78162951,78156367,78141319,78129307,78128160,78116234,78113923,78110354,78101025,78089499,78039274,78034445,78015548,78003055 Gene ID= ENSG00000132842.13 TPM= 1.81 Transcript Type= NA chr5 78358801 78360507 78358801 78360507 - ENST00000421004.3@SCAMP1-AS1 ENST00000421004.3 lincRNA 78360214,78358801 78360507,78359985 Gene ID= ENSG00000245556.2 TPM= 26.26 Transcript Type= lincRNA chr5 78360585 78480737 78360585 78480737 + transcript998.chr5.nic@SCAMP1 transcript998.chr5.nic protein_coding 78360585,78370620,78388837,78415520,78416541,78418775,78421801,78449933,78459245,78475504 78360728,78370805,78388914,78415618,78416649,78418903,78421960,78450034,78459362,78480737 Gene ID= ENSG00000085365.17 TPM= 4.53 Transcript Type= NA chr5 78360582 78478828 78360582 78478828 + transcript1001.chr5.nic@SCAMP1 transcript1001.chr5.nic protein_coding 78360582,78388837,78415520,78416541,78418775,78421801,78459245,78475504 78360728,78388914,78415618,78416649,78418903,78421960,78459362,78478828 Gene ID= ENSG00000085365.17 TPM= 3.62 Transcript Type= NA chr5 78485216 78648888 78485216 78648888 - transcript1004.chr5.nic@LHFPL2 transcript1004.chr5.nic protein_coding 78648499,78564813,78509784,78485216 78648888,78564871,78510398,78489153 Gene ID= ENSG00000145685.13 TPM= 19.92 Transcript Type= NA chr5 78485217 78648825 78485217 78648825 - ENST00000380345.6@LHFPL2 ENST00000380345.6 protein_coding 78648499,78632264,78564813,78509784,78485217 78648825,78632368,78564871,78510398,78489153 Gene ID= ENSG00000145685.13 TPM= 44.37 Transcript Type= protein_coding chr5 78777209 78985785 78777209 78985785 - ENST00000264914.8@ARSB ENST00000264914.8 protein_coding 78984937,78969006,78964416,78955295,78885584,78839356,78781852,78777209 78985785,78969192,78964606,78955502,78885827,78839426,78781974,78780662 Gene ID= ENSG00000113273.15 TPM= 6.34 Transcript Type= protein_coding chr5 78815511 78986087 78815511 78986087 - ENST00000396151.7@ARSB ENST00000396151.7 protein_coding 78985899,78984937,78969006,78964416,78955295,78885584,78839356,78815511 78986087,78985558,78969192,78964606,78955502,78885827,78839426,78816114 Gene ID= ENSG00000113273.15 TPM= 2.72 Transcript Type= protein_coding chr5 79018428 79069690 79018428 79069690 - transcript1011.chr5.nic@DMGDH transcript1011.chr5.nic protein_coding 79069520,79063613,79055810,79054184,79051287,79044304,79042283,79033239,79032687,79030833,79029904,79028433,79026424,79024271,79018428 79069690,79063787,79055908,79054348,79051491,79044552,79042481,79033408,79032840,79030998,79030034,79028650,79026581,79024330,79021681 Gene ID= ENSG00000132837.14 TPM= 3.62 Transcript Type= NA chr5 78997692 79069690 78997692 79069690 - transcript1015.chr5.nic@DMGDH transcript1015.chr5.nic protein_coding 79069520,79063613,79044304,79042283,79033239,79032687,79030833,79029904,79028433,79026424,79024271,79005273,78997692 79069690,79063787,79044552,79042481,79033408,79032840,79030998,79030034,79028650,79026581,79024330,79005407,78998297 Gene ID= ENSG00000132837.14 TPM= 2.72 Transcript Type= NA chr5 79069740 79090137 79069740 79090137 + transcript1020.chr5.nnic@BHMT2 transcript1020.chr5.nnic protein_coding 79069740,79077480,79079369,79080687,79083192,79083628,79088493 79069815,79077612,79079460,79080878,79083374,79083856,79090137 Gene ID= ENSG00000132840.9 TPM= 2.72 Transcript Type= NA chr5 79069717 79089466 79069717 79089466 + ENST00000255192.7@BHMT2 ENST00000255192.7 protein_coding 79069717,79077480,79079369,79080687,79082809,79083192,79083628,79088493 79069815,79077612,79079460,79080878,79082956,79083374,79083856,79089466 Gene ID= ENSG00000132840.9 TPM= 10.87 Transcript Type= protein_coding chr5 79612433 79686648 79612433 79686648 + ENST00000423041.6@PAPD4 ENST00000423041.6 protein_coding 79612433,79613011,79619612,79619994,79623252,79640851,79641105,79642844,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199 79612735,79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648 Gene ID= ENSG00000164329.13 TPM= 1.99 Transcript Type= protein_coding chr5 79612420 79686648 79612420 79686648 + ENST00000453514.5@PAPD4 ENST00000453514.5 protein_coding 79612420,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199 79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648 Gene ID= ENSG00000164329.13 TPM= 26.44 Transcript Type= protein_coding chr5 79612469 79686648 79612469 79686648 + transcript1028.chr5.nnic@PAPD4 transcript1028.chr5.nnic protein_coding 79612469,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79656958,79668892,79679579,79681982,79685199 79613075,79619785,79620083,79623489,79640965,79641196,79642985,79645192,79648693,79649190,79657001,79669028,79679670,79682061,79686648 Gene ID= ENSG00000164329.13 TPM= 4.71 Transcript Type= NA chr5 79612416 79686648 79612416 79686648 + transcript1035.chr5.nic@PAPD4 transcript1035.chr5.nic protein_coding 79612416,79619612,79619994,79623252,79640851,79641105,79642832,79645123,79648617,79649062,79668892,79679579,79681982,79685199 79613075,79619785,79620083,79623489,79640965,79641196,79642910,79645192,79648693,79649190,79669028,79679670,79682061,79686648 Gene ID= ENSG00000164329.13 TPM= 1.99 Transcript Type= NA chr5 79991294 80083283 79991294 80083283 + transcript1040.chr5.nic@THBS4 transcript1040.chr5.nic protein_coding 79991294,79998332,80040077,80055785,80058206,80058708,80059440,80059703,80061695,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080 79991412,79998375,80040280,80056032,80058314,80058790,80059491,80059905,80061832,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083283 Gene ID= ENSG00000113296.14 TPM= 2.72 Transcript Type= NA chr5 80035348 80083287 80035348 80083287 + ENST00000350881.6@THBS4 ENST00000350881.6 protein_coding 80035348,80040077,80055785,80058206,80058708,80059440,80059703,80061695,80065409,80067973,80070306,80070643,80071021,80072278,80073275,80076855,80078049,80078921,80079062,80079905,80082406,80083080 80035625,80040280,80056032,80058314,80058790,80059491,80059905,80061832,80065477,80068125,80070410,80070750,80071180,80072396,80073327,80077048,80078227,80078969,80079258,80080077,80082545,80083287 Gene ID= ENSG00000113296.14 TPM= 2.72 Transcript Type= protein_coding chr5 79991294 80020100 79991294 80020100 + transcript1045.chr5.nnic@THBS4 transcript1045.chr5.nnic protein_coding 79991294,79998332,80019737 79991412,79998375,80020100 Gene ID= ENSG00000113296.14 TPM= 1.81 Transcript Type= NA chr5 80113549 80256065 80113549 80256065 - transcript1049.chr5.nic@SERINC5 transcript1049.chr5.nic protein_coding 80255896,80202886,80177886,80177315,80174954,80169335,80166383,80158836,80150882,80147245,80146090,80113549 80256065,80203053,80178064,80177397,80175047,80169546,80166478,80158962,80150948,80147284,80146234,80116323 Gene ID= ENSG00000164300.16 TPM= 4.98 Transcript Type= NA chr5 80138727 80256079 80138727 80256079 - ENST00000507668.6@SERINC5 ENST00000507668.6 protein_coding 80255896,80202886,80177886,80177315,80174954,80169335,80166383,80158836,80150882,80147245,80146090,80138727 80256079,80203053,80178064,80177397,80175047,80169546,80166478,80158962,80150948,80147284,80146234,80143810 Gene ID= ENSG00000164300.16 TPM= 77.42 Transcript Type= protein_coding chr5 80165375 80256065 80165375 80256065 - transcript1054.chr5.nnic@SERINC5 transcript1054.chr5.nnic protein_coding 80255896,80202886,80177886,80177315,80174954,80169335,80166383,80165375 80256065,80203053,80178064,80177397,80175047,80169546,80166478,80165616 Gene ID= ENSG00000164300.16 TPM= 3.62 Transcript Type= NA chr5 80164933 80256065 80164933 80256065 - transcript1055.chr5.nic@SERINC5 transcript1055.chr5.nic protein_coding 80255896,80202886,80177886,80177315,80174954,80169335,80164933 80256065,80203053,80178064,80177397,80175047,80169546,80166478 Gene ID= ENSG00000164300.16 TPM= 6.34 Transcript Type= NA chr5 80408013 80479350 80408013 80479350 + ENST00000338008.9@ZFYVE16 ENST00000338008.9 protein_coding 80408013,80434109,80436756,80439936,80443123,80445263,80448026,80449591,80450431,80451485,80455692,80456461,80456945,80459414,80472761,80473754,80474663,80477219 80408153,80434217,80439007,80440032,80443284,80445405,80448404,80449713,80450586,80451709,80455774,80456565,80457092,80459494,80472923,80473859,80474830,80479350 Gene ID= ENSG00000039319.16 TPM= 8.15 Transcript Type= protein_coding chr5 80626228 80654983 80626228 80654983 - ENST00000439211.6@DHFR ENST00000439211.6 protein_coding 80654404,80654008,80649389,80637883,80633877,80626228 80654983,80654057,80649494,80638009,80633992,80629165 Gene ID= ENSG00000228716.6 TPM= 8.15 Transcript Type= protein_coding chr5 81237565 81301559 81237565 81301559 - ENST00000502041.2@CKMT2-AS1 ENST00000502041.2 antisense_RNA 81301287,81237565 81301559,81239360 Gene ID= ENSG00000247572.7 TPM= 3.62 Transcript Type= antisense_RNA chr5 81233324 81266397 81233324 81266397 + ENST00000424301.6@CKMT2 ENST00000424301.6 protein_coding 81233324,81244042,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139 81233377,81244205,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266397 Gene ID= ENSG00000131730.15 TPM= 3.17 Transcript Type= protein_coding chr5 81233323 81266401 81233323 81266401 + transcript1074.chr5.nic@CKMT2 transcript1074.chr5.nic protein_coding 81233323,81251113,81252695,81254396,81254981,81256915,81257733,81259120,81263491,81266139 81233377,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266401 Gene ID= ENSG00000131730.15 TPM= 1.81 Transcript Type= NA chr5 81232906 81266401 81232906 81266401 + transcript1078.chr5.nic@CKMT2 transcript1078.chr5.nic protein_coding 81232906,81251113,81252695,81254396,81254993,81257733,81259120,81263491,81266139 81233377,81251284,81252893,81254491,81255214,81257856,81259254,81263616,81266401 Gene ID= ENSG00000131730.15 TPM= 1.81 Transcript Type= NA chr5 81233320 81266395 81233320 81266395 + ENST00000437669.5@CKMT2 ENST00000437669.5 protein_coding 81233320,81251113,81252695,81254396,81254993,81256915,81257733,81259120,81263491,81266139 81233381,81251284,81252893,81254491,81255214,81257000,81257856,81259254,81263616,81266395 Gene ID= ENSG00000131730.15 TPM= 14.94 Transcript Type= protein_coding chr5 81301624 81313154 81301624 81313154 + ENST00000380199.9@ZCCHC9 ENST00000380199.9 protein_coding 81301624,81304741,81308561,81308946,81311211,81312544 81301670,81305141,81308711,81309038,81311279,81313154 Gene ID= ENSG00000131732.11 TPM= 7.24 Transcript Type= protein_coding chr5 81972025 82256139 81972025 82256139 + ENST00000282185.7@ATG10 ENST00000282185.7 protein_coding 81972025,81987559,82058495,82164399,82178490,82252562,82253314,82254068 81972306,81987678,82058602,82164537,82178587,82252659,82253429,82256139 Gene ID= ENSG00000152348.15 TPM= 1.81 Transcript Type= protein_coding chr5 81972051 82254792 81972051 82254792 + ENST00000458350.7@ATG10 ENST00000458350.7 protein_coding 81972051,81976193,81987559,82058495,82164399,82178490,82252562,82253314,82254068 81972306,81976327,81987678,82058602,82164537,82178587,82252659,82253429,82254792 Gene ID= ENSG00000152348.15 TPM= 1.81 Transcript Type= protein_coding chr5 82273322 82278412 82273322 82278412 - transcript1094.chr5.nnic@RPS23 transcript1094.chr5.nnic protein_coding 82278320,82277693,82276398,82274624,82273322 82278412,82277852,82276518,82276255,82274516 Gene ID= ENSG00000186468.12 TPM= 260.8 Transcript Type= NA chr5 83052846 83077496 83052846 83077496 - ENST00000502346.1@TMEM167A ENST00000502346.1 protein_coding 83077321,83065008,83061877,83052846 83077496,83065117,83061911,83057154 Gene ID= ENSG00000174695.9 TPM= 113.19 Transcript Type= protein_coding chr5 83077593 83353787 83077593 83353787 + ENST00000511817.1@XRCC4 ENST00000511817.1 protein_coding 83077593,83104910,83111028,83195770,83203552,83204815,83258530,83353125 83077662,83105058,83111203,83195936,83203707,83204921,83258677,83353787 Gene ID= ENSG00000152422.15 TPM= 5.43 Transcript Type= protein_coding chr5 83940554 84384793 83940554 84384793 - ENST00000296591.9@EDIL3 ENST00000296591.9 protein_coding 84384308,84254084,84229855,84180393,84137241,84106649,84066451,84064700,84060300,83963205,83940554 84384793,84254212,84229884,84180521,84137354,84106830,84066606,84064844,84060484,83963360,83943568 Gene ID= ENSG00000164176.12 TPM= 14.49 Transcript Type= protein_coding chr5 86617904 86620962 86617904 86620962 + ENST00000247655.3@COX7C ENST00000247655.3 protein_coding 86617904,86619353,86620668 86618130,86619496,86620962 Gene ID= ENSG00000127184.12 TPM= 308.34 Transcript Type= protein_coding chr5 86617928 86620766 86617928 86620766 + ENST00000511472.5@COX7C ENST00000511472.5 protein_coding 86617928,86619353,86620668 86618053,86619496,86620766 Gene ID= ENSG00000127184.12 TPM= 32.15 Transcript Type= processed_transcript chr5 87389009 87412936 87389009 87412936 - transcript1136.chr5.nnic@CCNH transcript1136.chr5.nnic protein_coding 87412678,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87392770,87389009 87412936,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87392904,87391007 Gene ID= ENSG00000134480.13 TPM= 1.81 Transcript Type= NA chr5 87394265 87413019 87394265 87413019 - ENST00000256897.8@CCNH ENST00000256897.8 protein_coding 87412678,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394265 87413019,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484 Gene ID= ENSG00000134480.13 TPM= 26.26 Transcript Type= protein_coding chr5 87394274 87412904 87394274 87412904 - ENST00000504878.1@CCNH ENST00000504878.1 protein_coding 87412435,87411224,87409290,87407976,87404844,87401702,87399394,87395044,87394274 87412904,87411346,87409363,87408186,87405007,87401772,87399505,87395104,87394484 Gene ID= ENSG00000134480.13 TPM= 1.81 Transcript Type= protein_coding chr5 88195206 88268848 88195206 88268848 - ENST00000296595.10@TMEM161B ENST00000296595.10 protein_coding 88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88197669,88195206 88268848,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88197765,88196488 Gene ID= ENSG00000164180.13 TPM= 4.53 Transcript Type= protein_coding chr5 88195207 88268848 88195207 88268848 - transcript1150.chr5.nic@TMEM161B transcript1150.chr5.nic protein_coding 88268721,88240813,88228445,88225769,88220563,88207029,88206439,88205814,88202962,88198976,88195207 88268848,88240916,88228528,88225866,88220719,88207180,88206499,88205954,88203075,88199150,88196488 Gene ID= ENSG00000164180.13 TPM= 3.62 Transcript Type= NA chr5 88268924 88287656 88268924 88287656 + transcript1154.chr5.nic@TMEM161B-AS1 transcript1154.chr5.nic antisense_RNA 88268924,88270526,88282042,88282715,88283010,88285741,88287436 88269027,88270585,88282106,88282866,88283086,88285851,88287656 Gene ID= ENSG00000247828.7 TPM= 2.26 Transcript Type= NA chr5 88269005 88287656 88269005 88287656 + transcript1157.chr5.nic@TMEM161B-AS1 transcript1157.chr5.nic antisense_RNA 88269005,88270526,88282042,88282715,88285741,88287436 88269119,88270585,88282106,88282866,88285851,88287656 Gene ID= ENSG00000247828.7 TPM= 2.26 Transcript Type= NA chr5 88268924 88282139 88268924 88282139 + transcript1161.chr5.nic@TMEM161B-AS1 transcript1161.chr5.nic antisense_RNA 88268924,88270526,88282042 88269027,88270585,88282139 Gene ID= ENSG00000247828.7 TPM= 3.62 Transcript Type= NA chr5 88717117 88883464 88717117 88883464 - ENST00000504921.6@MEF2C ENST00000504921.6 protein_coding 88882955,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88717117 88883464,88823930,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722925 Gene ID= ENSG00000081189.15 TPM= 21.43 Transcript Type= protein_coding chr5 88718242 88883475 88718242 88883475 - transcript1173.chr5.nic@MEF2C transcript1173.chr5.nic protein_coding 88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88718242 88883475,88823930,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722829 Gene ID= ENSG00000081189.15 TPM= 16 Transcript Type= NA chr5 88718242 88825879 88718242 88825879 - transcript1178.chr5.nic@MEF2C transcript1178.chr5.nic protein_coding 88825719,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88718242 88825879,88823930,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722925 Gene ID= ENSG00000081189.15 TPM= 2.42 Transcript Type= NA chr5 88797483 88883197 88797483 88883197 - transcript1182.chr5.nic@MEF2C transcript1182.chr5.nic protein_coding 88882955,88823735,88797483 88883197,88823930,88804801 Gene ID= ENSG00000081189.15 TPM= 2.72 Transcript Type= NA chr5 88720829 88883184 88720829 88883184 - ENST00000510942.5@MEF2C ENST00000510942.5 protein_coding 88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88720829 88883184,88823927,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722829 Gene ID= ENSG00000081189.15 TPM= 28.52 Transcript Type= protein_coding chr5 88720825 88825864 88720825 88825864 - ENST00000514028.5@MEF2C ENST00000514028.5 protein_coding 88825719,88823735,88804598,88761185,88751857,88749070,88731729,88730211,88729218,88728493,88720825 88825864,88823930,88804801,88761328,88752043,88749117,88731901,88730234,88729347,88728628,88722829 Gene ID= ENSG00000081189.15 TPM= 3.17 Transcript Type= protein_coding chr5 88722489 88883181 88722489 88883181 - ENST00000508569.5@MEF2C ENST00000508569.5 protein_coding 88882955,88823735,88804598,88761185,88751857,88749070,88731729,88729218,88728493,88722489 88883181,88823930,88804801,88761328,88752043,88749117,88731901,88729347,88728628,88722925 Gene ID= ENSG00000081189.15 TPM= 1.81 Transcript Type= protein_coding chr5 90392261 90409786 90392261 90409786 - ENST00000283122.7@CETN3 ENST00000283122.7 protein_coding 90409645,90407699,90405685,90399358,90392261 90409786,90407834,90405799,90399549,90394107 Gene ID= ENSG00000153140.8 TPM= 25.36 Transcript Type= protein_coding chr5 90458203 90474768 90458203 90474768 - ENST00000316610.6@MBLAC2 ENST00000316610.6 protein_coding 90473839,90458203 90474768,90461552 Gene ID= ENSG00000176055.9 TPM= 12.68 Transcript Type= protein_coding chr5 90515626 90529581 90515626 90529581 - ENST00000315948.10@LYSMD3 ENST00000315948.10 protein_coding 90529448,90525035,90515626 90529581,90525300,90519484 Gene ID= ENSG00000176018.12 TPM= 11.77 Transcript Type= protein_coding chr5 90965405 91167906 90965405 91167906 + transcript1191.chr5.nnic@NA transcript1191.chr5.nnic NA 90965405,90985344,91072447,91102219,91150030,91153221,91163782 90965531,90985522,91072604,91102340,91150221,91153398,91167906 Gene ID= novel_gene_chr5_1192 TPM= 2.72 Transcript Type= NA chr5 91368728 91383317 91368728 91383317 - transcript1200.chr5.nic@ARRDC3 transcript1200.chr5.nic protein_coding 91382813,91378694,91375511,91374922,91374114,91373684,91368728 91383317,91378775,91375613,91375178,91374276,91373838,91371456 Gene ID= ENSG00000113369.8 TPM= 13.58 Transcript Type= NA chr5 91368726 91383644 91368726 91383644 - transcript1203.chr5.nic@ARRDC3 transcript1203.chr5.nic protein_coding 91382813,91378694,91376621,91375511,91374922,91373684,91368726 91383644,91378775,91376768,91375613,91375178,91374276,91371456 Gene ID= ENSG00000113369.8 TPM= 7.24 Transcript Type= NA chr5 91368724 91383359 91368724 91383359 - ENST00000265138.3@ARRDC3 ENST00000265138.3 protein_coding 91382813,91378694,91376621,91375511,91374922,91374114,91373684,91368724 91383359,91378775,91376768,91375613,91375178,91374276,91373838,91371456 Gene ID= ENSG00000113369.8 TPM= 278 Transcript Type= protein_coding chr5 93409825 93581324 93409825 93581324 - transcript1218.chr5.nnic@NR2F1-AS1 transcript1218.chr5.nnic antisense_RNA 93581142,93563364,93554874,93553761,93438703,93409825 93581324,93563463,93554995,93553863,93438741,93411509 Gene ID= ENSG00000237187.8 TPM= 2.42 Transcript Type= NA chr5 93541872 93584440 93541872 93584440 - transcript1223.chr5.nnic@NR2F1-AS1 transcript1223.chr5.nnic antisense_RNA 93583778,93563364,93554874,93553761,93544795,93541872 93584440,93563463,93554995,93553863,93544915,93544024 Gene ID= ENSG00000237187.8 TPM= 2.26 Transcript Type= NA chr5 93409825 93581046 93409825 93581046 - transcript1224.chr5.nic@NR2F1-AS1 transcript1224.chr5.nic antisense_RNA 93580467,93563364,93554874,93553761,93409825 93581046,93563463,93554995,93553863,93411509 Gene ID= ENSG00000237187.8 TPM= 2.42 Transcript Type= NA chr5 93409353 93581522 93409353 93581522 - transcript1225.chr5.nic@NR2F1-AS1 transcript1225.chr5.nic antisense_RNA 93581142,93563364,93554874,93553761,93409353 93581522,93563463,93554995,93553863,93411509 Gene ID= ENSG00000237187.8 TPM= 4.23 Transcript Type= NA chr5 93541872 93581288 93541872 93581288 - ENST00000606696.5@NR2F1-AS1 ENST00000606696.5 antisense_RNA 93581142,93563364,93554874,93553761,93544795,93541872 93581288,93563463,93554995,93553863,93544915,93544024 Gene ID= ENSG00000237187.8 TPM= 2.26 Transcript Type= antisense_RNA chr5 93582951 93594615 93582951 93594615 + transcript1227.chr5.nnic@NR2F1 transcript1227.chr5.nnic protein_coding 93582951,93585401,93587917,93593562 93584422,93585486,93588444,93594615 Gene ID= ENSG00000175745.11 TPM= 3.62 Transcript Type= NA chr5 93583337 93594615 93583337 93594615 + ENST00000327111.7@NR2F1 ENST00000327111.7 protein_coding 93583337,93587917,93593562 93585486,93588444,93594615 Gene ID= ENSG00000175745.11 TPM= 27.17 Transcript Type= protein_coding chr5 93618069 94111635 93618069 94111635 - ENST00000395965.7@FAM172A ENST00000395965.7 protein_coding 94111511,94074646,94053126,94050731,93964458,93958777,93881470,93824148,93784383,93776159,93618069 94111635,94074769,94053227,94050831,93964523,93958968,93881688,93824267,93784499,93776243,93621129 Gene ID= ENSG00000113391.18 TPM= 6.34 Transcript Type= protein_coding chr5 94618347 94697621 94618347 94697621 + ENST00000265140.9@SLF1 ENST00000265140.9 protein_coding 94618347,94628811,94629092,94630503,94643273,94649454,94651702,94653272,94654630,94662298,94663750,94665861,94670151,94670843,94678808,94686573,94688506,94689473,94691564,94692074,94694831 94618765,94628924,94629167,94630743,94643435,94649597,94651845,94653421,94654752,94662351,94663908,94666024,94670279,94671008,94678955,94686718,94688669,94689606,94691656,94692256,94697621 Gene ID= ENSG00000133302.12 TPM= 1.81 Transcript Type= protein_coding chr5 95463915 95555015 95463915 95555015 - transcript1251.chr5.nic@TTC37 transcript1251.chr5.nic protein_coding 95554936,95550581,95548560,95547061,95543184,95541815,95541305,95540690,95537043,95536817,95530089,95529001,95528013,95525587,95525398,95524465,95523655,95523202,95522054,95520716,95517146,95516916,95516672,95516525,95516353,95514855,95513571,95512477,95509594,95506934,95503814,95502880,95498370,95497416,95494964,95494682,95490908,95484724,95482473,95478290,95469780,95467866,95463915 95555015,95550650,95548715,95547151,95543327,95541906,95541380,95540830,95537141,95536925,95530229,95529102,95528152,95525673,95525501,95524591,95523834,95523326,95522307,95520818,95517322,95517060,95516750,95516586,95516409,95514923,95513645,95512618,95509687,95506992,95503938,95503003,95498591,95497488,95495017,95494793,95491036,95484845,95482631,95478442,95469910,95467989,95464681 Gene ID= ENSG00000198677.10 TPM= 1.81 Transcript Type= NA chr5 95463895 95555007 95463895 95555007 - ENST00000358746.6@TTC37 ENST00000358746.6 protein_coding 95554936,95550581,95548560,95547061,95543184,95541815,95541305,95540690,95537043,95536817,95530089,95529001,95528013,95525587,95525398,95524465,95523655,95523202,95522054,95520716,95517146,95516916,95516672,95516525,95516353,95514855,95513571,95512477,95509594,95506934,95503814,95502880,95498370,95497416,95494964,95494682,95490908,95484724,95482473,95478290,95469780,95467866,95463895 95555007,95550650,95548715,95547151,95543327,95541906,95541380,95540830,95537141,95536925,95530229,95529102,95528152,95525673,95525501,95524591,95523834,95523326,95522307,95520818,95517322,95517060,95516750,95516586,95516409,95514923,95513645,95512618,95509687,95507011,95503938,95503003,95498591,95497488,95495017,95494793,95491036,95484845,95482631,95478442,95469910,95467989,95464681 Gene ID= ENSG00000198677.10 TPM= 44.37 Transcript Type= protein_coding chr5 95555074 95605064 95555074 95605064 + ENST00000380009.8@ARSK ENST00000380009.8 protein_coding 95555074,95565998,95567890,95582916,95586562,95591401,95600847,95603237 95555404,95566127,95568049,95583198,95586733,95591625,95601071,95605064 Gene ID= ENSG00000164291.16 TPM= 12.68 Transcript Type= protein_coding chr5 95730927 95811908 95730927 95811908 + transcript1261.chr5.nnic@RHOBTB3 transcript1261.chr5.nnic protein_coding 95730927,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762,95809672 95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95788858,95811908 Gene ID= ENSG00000164292.12 TPM= 3.02 Transcript Type= NA chr5 95730927 95789384 95730927 95789384 + transcript1264.chr5.nic@RHOBTB3 transcript1264.chr5.nic protein_coding 95730927,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762 95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95789384 Gene ID= ENSG00000164292.12 TPM= 5.73 Transcript Type= NA chr5 95730927 95796365 95730927 95796365 + transcript1266.chr5.nnic@RHOBTB3 transcript1266.chr5.nnic protein_coding 95730927,95731859,95736889,95748333,95752239,95763508,95768046,95780252,95783797,95788762,95793059 95731684,95732084,95737075,95748487,95752350,95763620,95768166,95780425,95783963,95788858,95796365 Gene ID= ENSG00000164292.12 TPM= 9.35 Transcript Type= NA chr5 95731175 95796367 95731175 95796367 + ENST00000379982.7@RHOBTB3 ENST00000379982.7 protein_coding 95731175,95731859,95736889,95748333,95752239,95755396,95763508,95768046,95780252,95783797,95788762,95793059 95731684,95732084,95737075,95748487,95752350,95755761,95763620,95768166,95780425,95783963,95788858,95796367 Gene ID= ENSG00000164292.12 TPM= 42.56 Transcript Type= protein_coding chr5 95731146 95732751 95731146 95732751 + ENST00000506817.1@RHOBTB3 ENST00000506817.1 protein_coding 95731146,95731859 95731684,95732751 Gene ID= ENSG00000164292.12 TPM= 1.81 Transcript Type= protein_coding chr5 95813849 95823005 95813849 95823005 - ENST00000237858.10@GLRX ENST00000237858.10 protein_coding 95822456,95816507,95813849 95823005,95816626,95814389 Gene ID= ENSG00000173221.13 TPM= 116.36 Transcript Type= protein_coding chr5 96661965 96774680 96661965 96774680 + transcript1275.chr5.nic@CAST transcript1275.chr5.nic protein_coding 96661965,96662352,96675539,96695836,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640 96662165,96662497,96675601,96695907,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774680 Gene ID= ENSG00000153113.23 TPM= 15.39 Transcript Type= NA chr5 96662178 96774680 96662178 96774680 + transcript1276.chr5.nic@CAST transcript1276.chr5.nic protein_coding 96662178,96675539,96695836,96722639,96726794,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640 96662497,96675601,96695907,96722698,96726859,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774680 Gene ID= ENSG00000153113.23 TPM= 10.41 Transcript Type= NA chr5 96662076 96774680 96662076 96774680 + transcript1280.chr5.nic@CAST transcript1280.chr5.nic protein_coding 96662076,96675539,96695836,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640 96662497,96675601,96695907,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774680 Gene ID= ENSG00000153113.23 TPM= 47.09 Transcript Type= NA chr5 96702789 96774680 96702789 96774680 + transcript1293.chr5.nic@CAST transcript1293.chr5.nic protein_coding 96702789,96722639,96727489,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640 96702915,96722698,96727530,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774680 Gene ID= ENSG00000153113.23 TPM= 16.75 Transcript Type= NA chr5 96662237 96774683 96662237 96774683 + ENST00000395812.6@CAST ENST00000395812.6 protein_coding 96662237,96675539,96695836,96722639,96727489,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640 96662497,96675601,96695907,96722698,96727530,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683 Gene ID= ENSG00000153113.23 TPM= 10.41 Transcript Type= protein_coding chr5 96702801 96774683 96702801 96774683 + ENST00000309190.9@CAST ENST00000309190.9 protein_coding 96702801,96722639,96727489,96729153,96729612,96730780,96736172,96737849,96740038,96740745,96741266,96741494,96742655,96746342,96747345,96748518,96750587,96754060,96754658,96757444,96757583,96762274,96765221,96766053,96767438,96767907,96770531,96771644,96772640 96702915,96722698,96727530,96729209,96729725,96730860,96736240,96737947,96740118,96740783,96741358,96741580,96742756,96746425,96747392,96748613,96750682,96754161,96754741,96757494,96757654,96762372,96765325,96766145,96767482,96767999,96770602,96771702,96774683 Gene ID= ENSG00000153113.23 TPM= 60.22 Transcript Type= protein_coding chr5 96760810 96808100 96760810 96808100 - ENST00000296754.7@ERAP1 ENST00000296754.7 protein_coding 96807860,96803403,96800862,96797175,96795042,96793803,96793400,96792061,96790512,96790296,96788531,96786470,96785788,96783924,96783051,96781693,96781058,96780423,96776404,96760810 96808100,96803943,96801000,96797309,96795162,96793957,96793513,96792192,96790643,96790367,96788685,96786549,96785971,96784080,96783235,96781854,96781198,96780504,96776551,96763228 Gene ID= ENSG00000164307.12 TPM= 2.72 Transcript Type= protein_coding chr5 96774484 96807909 96774484 96807909 - ENST00000443439.6@ERAP1 ENST00000443439.6 protein_coding 96807860,96803403,96800862,96797175,96795042,96793803,96793400,96792061,96790512,96790296,96788531,96786470,96785788,96783924,96783051,96781693,96781058,96780423,96774484 96807909,96803943,96801000,96797309,96795162,96793957,96793513,96792192,96790643,96790367,96788685,96786549,96785971,96784080,96783235,96781854,96781198,96780504,96776551 Gene ID= ENSG00000164307.12 TPM= 4.53 Transcript Type= protein_coding chr5 96875939 96919716 96875939 96919716 + ENST00000437043.7@ERAP2 ENST00000437043.7 protein_coding 96875939,96879564,96883792,96886655,96889185,96892299,96895246,96896373,96896732,96900121,96901506,96902274,96903377,96908961,96909580,96912637,96913317,96915688,96917462 96876527,96880260,96883930,96886789,96889305,96892453,96895359,96896504,96896863,96900189,96901681,96902353,96903560,96909117,96909764,96912798,96913457,96915769,96919716 Gene ID= ENSG00000164308.16 TPM= 11.77 Transcript Type= protein_coding chr5 96876465 96917905 96876465 96917905 + transcript1305.chr5.nnic@ERAP2 transcript1305.chr5.nnic protein_coding 96876465,96879564,96883792,96886655,96889185,96892299,96895246,96896373,96896732,96901506,96902274,96903377,96908961,96909580,96912637,96913317,96915688,96917462 96876527,96880260,96883930,96886789,96889305,96892453,96895359,96896504,96896863,96901681,96902353,96903560,96909117,96909764,96912798,96913457,96915769,96917905 Gene ID= ENSG00000164308.16 TPM= 1.81 Transcript Type= NA chr5 97160867 97183260 97160867 97183260 - ENST00000283109.7@RIOK2 ENST00000283109.7 protein_coding 97183126,97179055,97177732,97177116,97173175,97171206,97168760,97167467,97165051,97160867 97183260,97179193,97177848,97177291,97173263,97171397,97168852,97167991,97165147,97163225 Gene ID= ENSG00000058729.10 TPM= 27.17 Transcript Type= protein_coding chr5 98773635 98794055 98773635 98794055 + ENST00000513185.1@RGMB ENST00000513185.1 protein_coding 98773635,98779580,98793085 98774206,98780088,98794055 Gene ID= ENSG00000174136.11 TPM= 4.53 Transcript Type= protein_coding chr5 98853985 98928957 98853985 98928957 - ENST00000614616.4@CHD1 ENST00000614616.4 protein_coding 98928539,98926334,98904897,98903792,98902900,98901186,98900811,98899480,98898664,98898256,98897193,98896226,98894597,98893416,98892525,98889076,98888088,98885578,98883088,98881975,98881279,98881076,98879552,98876398,98875072,98873593,98872417,98872051,98870687,98869754,98868495,98863408,98859972,98858964,98858180,98853985 98928957,98926534,98905098,98903908,98902964,98901335,98901082,98899705,98898764,98898434,98897320,98896442,98894686,98893606,98892713,98889238,98888240,98885649,98883237,98882123,98881375,98881171,98879728,98876558,98875113,98873723,98872555,98872201,98870803,98869882,98868635,98863586,98860068,98859015,98858390,98856725 Gene ID= ENSG00000153922.10 TPM= 4.53 Transcript Type= protein_coding chr5 100535305 100586741 100535305 100586741 + ENST00000312637.4@FAM174A ENST00000312637.4 protein_coding 100535305,100562054,100586181 100535964,100562188,100586741 Gene ID= ENSG00000174132.8 TPM= 52.52 Transcript Type= protein_coding chr5 102755155 103029724 102755155 103029724 + transcript1336.chr5.nic@PAM transcript1336.chr5.nic protein_coding 102755155,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102974116,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887 102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102974436,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029724 Gene ID= ENSG00000145730.20 TPM= 101.72 Transcript Type= NA chr5 102755172 103029724 102755172 103029724 + transcript1337.chr5.nnic@PAM transcript1337.chr5.nnic protein_coding 102755172,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102987518,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887 102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102987571,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029724 Gene ID= ENSG00000145730.20 TPM= 29.73 Transcript Type= NA chr5 102754667 103029724 102754667 103029724 + transcript1351.chr5.nic@PAM transcript1351.chr5.nic protein_coding 102754667,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887 102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029724 Gene ID= ENSG00000145730.20 TPM= 203.59 Transcript Type= NA chr5 102754355 103029718 102754355 103029718 + transcript1363.chr5.nic@PAM transcript1363.chr5.nic protein_coding 102754355,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028887 102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103029718 Gene ID= ENSG00000145730.20 TPM= 73.6 Transcript Type= NA chr5 102755157 103029724 102755157 103029724 + transcript1364.chr5.nic@PAM transcript1364.chr5.nic protein_coding 102755157,102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103028182,103028887 102755348,102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103028238,103029724 Gene ID= ENSG00000145730.20 TPM= 69.98 Transcript Type= NA chr5 102865823 103029713 102865823 103029713 + ENST00000348126.6@PAM ENST00000348126.6 protein_coding 102865823,102867273,102901356,102913934,102924957,102926585,102946837,102948378,102949537,102949902,102950717,102959875,102961158,102990272,103003033,103005154,103006801,103007457,103009751,103017334,103019790,103025131,103028185,103028887 102866284,102867393,102901413,102914021,102925042,102926668,102946885,102948445,102949617,102949978,102950820,102960059,102961229,102990401,103003149,103005226,103007011,103007657,103009866,103017433,103019843,103025334,103028238,103029713 Gene ID= ENSG00000145730.20 TPM= 297.7 Transcript Type= protein_coding chr5 103120274 103203206 103120274 103203206 + transcript1392.chr5.nic@PPIP5K2 transcript1392.chr5.nic protein_coding 103120274,103129306,103133453,103136732,103138384,103146527,103147931,103149152,103151253,103152648,103153848,103154670,103154834,103155909,103158188,103158452,103159146,103167179,103168072,103173155,103173858,103177667,103177864,103180021,103184672,103190842,103194900,103201522 103120488,103129703,103133648,103136822,103138469,103146681,103148032,103149313,103151374,103152749,103153934,103154745,103154943,103155994,103158313,103158573,103159328,103167320,103168295,103173282,103173972,103177774,103177980,103180188,103184744,103190982,103195025,103203206 Gene ID= ENSG00000145725.19 TPM= 1.81 Transcript Type= NA chr5 103258702 103278660 103258702 103278660 + ENST00000319933.6@C5orf30 ENST00000319933.6 protein_coding 103258702,103265908,103275897 103258896,103265997,103278660 Gene ID= ENSG00000181751.9 TPM= 15.39 Transcript Type= protein_coding chr5 103548854 103562807 103548854 103562807 - transcript1402.chr5.nic@NUDT12 transcript1402.chr5.nic protein_coding 103562703,103558879,103555931,103554740,103552217,103548854 103562807,103560254,103556098,103554853,103552416,103550971 Gene ID= ENSG00000112874.9 TPM= 2.72 Transcript Type= NA chr5 103548855 103562793 103548855 103562793 - ENST00000230792.6@NUDT12 ENST00000230792.6 protein_coding 103562703,103560043,103558879,103555931,103554740,103552217,103548855 103562793,103560254,103559468,103556098,103554853,103552416,103550971 Gene ID= ENSG00000112874.9 TPM= 27.17 Transcript Type= protein_coding chr5 107878222 108381425 107878222 108381425 - transcript1406.chr5.nic@FBXL17 transcript1406.chr5.nic protein_coding 108380699,108367831,108364738,108348399,108224121,108186117,108020925,107878222 108381425,108367953,108364995,108348530,108224228,108186247,108021001,107881179 Gene ID= ENSG00000145743.15 TPM= 1.81 Transcript Type= NA chr5 108297736 108382255 108297736 108382255 - transcript1409.chr5.nnic@FBXL17 transcript1409.chr5.nnic protein_coding 108380699,108367831,108364738,108348399,108297736 108382255,108367953,108364995,108348530,108299837 Gene ID= ENSG00000145743.15 TPM= 3.62 Transcript Type= NA chr5 107859045 108382098 107859045 108382098 - ENST00000542267.5@FBXL17 ENST00000542267.5 protein_coding 108380699,108367831,108364738,108348399,108224121,108186117,108020925,107881037,107859045 108382098,108367953,108364995,108348530,108224228,108186247,108021001,107881179,107861860 Gene ID= ENSG00000145743.15 TPM= 19.02 Transcript Type= protein_coding chr5 108748943 109187745 108748943 109187745 + transcript1411.chr5.nic@FER transcript1411.chr5.nic protein_coding 108748943,108768093,108798124,108832770,108835708,108867767,108871365,108872093,108883396,108897659,108946130,108954729,108959225,109037422,109044680,109047104,109100396,109180747,109186200,109187433 108748993,108768238,108798389,108832943,108835807,108867950,108871502,108872212,108883518,108897848,108946222,108954932,108959347,109037478,109044795,109047198,109100519,109180901,109186322,109187745 Gene ID= ENSG00000151422.12 TPM= 3.62 Transcript Type= NA chr5 109334709 109409994 109334709 109409994 - ENST00000361189.6@PJA2 ENST00000361189.6 protein_coding 109409842,109383403,109381503,109378204,109368561,109362840,109355915,109344705,109344190,109334709 109409994,109383520,109381703,109379254,109368746,109363022,109356026,109344819,109344311,109337356 Gene ID= ENSG00000198961.9 TPM= 143.98 Transcript Type= protein_coding chr5 109689366 109867178 109689366 109867178 + ENST00000261483.4@MAN2A1 ENST00000261483.4 protein_coding 109689366,109713520,109716120,109729342,109755329,109767535,109770355,109774788,109781396,109784744,109788934,109789460,109817273,109819669,109820220,109823723,109842328,109845865,109847657,109855140,109865036,109866846 109690552,109713774,109716264,109729513,109755456,109767708,109770541,109774965,109781598,109784926,109789048,109789527,109817438,109819887,109820342,109823837,109842461,109846006,109847790,109855334,109865146,109867178 Gene ID= ENSG00000112893.9 TPM= 19.92 Transcript Type= protein_coding chr5 110738994 110762784 110738994 110762784 + ENST00000355943.7@SLC25A46 ENST00000355943.7 protein_coding 110738994,110742047,110743730,110746269,110748163,110755465,110756702,110761204 110739402,110742089,110743787,110746346,110748263,110755521,110756759,110762784 Gene ID= ENSG00000164209.16 TPM= 11.77 Transcript Type= protein_coding chr5 111729296 111757258 111729296 111757258 - ENST00000257435.11@NREP ENST00000257435.11 protein_coding 111757136,111755770,111735430,111729296 111757258,111755830,111735507,111731046 Gene ID= ENSG00000134986.13 TPM= 10.87 Transcript Type= protein_coding chr5 112160526 112164276 112160526 112164276 + ENST00000413221.6@EPB41L4A-AS1 ENST00000413221.6 lincRNA 112160526,112161703,112162151 112161295,112161775,112164276 Gene ID= ENSG00000224032.6 TPM= 20.83 Transcript Type= lincRNA chr5 112876379 112922539 112876379 112922539 - ENST00000379638.8@REEP5 ENST00000379638.8 protein_coding 112922073,112921163,112902380,112887015,112876379 112922539,112921256,112902518,112887183,112878835 Gene ID= ENSG00000129625.12 TPM= 439.49 Transcript Type= protein_coding chr5 112976736 113020970 112976736 113020970 + ENST00000389063.2@DCP2 ENST00000389063.2 protein_coding 112976736,112985835,112992121,112992672,113001084,113001357,113001567,113003942,113007938,113010756,113013321 112976986,112985986,112992248,112992770,113001236,113001469,113001674,113004077,113008042,113010807,113020970 Gene ID= ENSG00000172795.15 TPM= 12.68 Transcript Type= protein_coding chr5 113022099 113294949 113022099 113294949 - ENST00000302475.8@MCC ENST00000302475.8 protein_coding 113294329,113151309,113143218,113122684,113104192,113101739,113085164,113084101,113082860,113071094,113068080,113063984,113053725,113049093,113043530,113028934,113022099 113294949,113151422,113143360,113122826,113104355,113101945,113085310,113084190,113083008,113071234,113068183,113064167,113053959,113049299,113043630,113029056,113027482 Gene ID= ENSG00000171444.17 TPM= 4.53 Transcript Type= protein_coding chr5 113513683 113595284 113513683 113595284 + ENST00000161863.8@YTHDC2 ENST00000161863.8 protein_coding 113513683,113515272,113524981,113526586,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080,113563373,113563859,113565893,113567092,113567654,113579586,113581417,113584302,113591041,113591996,113593303,113593482 113514082,113515362,113525177,113526785,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561185,113563492,113564131,113566019,113567297,113567849,113579695,113581709,113584479,113591244,113592178,113593390,113595284 Gene ID= ENSG00000047188.15 TPM= 17.21 Transcript Type= protein_coding chr5 113513694 113594133 113513694 113594133 + transcript1489.chr5.nnic@YTHDC2 transcript1489.chr5.nnic protein_coding 113513694,113515272,113524981,113526586,113532879,113534305,113535642,113539074,113540968,113542368,113548541,113548955,113553181,113553590,113553767,113553942,113556052,113561080,113563373,113565959,113567092,113567654,113579586,113581417,113584302,113591041,113591996,113593303,113593482 113514082,113515362,113525177,113526785,113533045,113534407,113535798,113539181,113541116,113542503,113548667,113549020,113553359,113553686,113553854,113554022,113556134,113561185,113563492,113566019,113567297,113567849,113579695,113581709,113584479,113591244,113592178,113593390,113594133 Gene ID= ENSG00000047188.15 TPM= 1.81 Transcript Type= NA chr5 115124763 115169961 115124763 115169961 - ENST00000513154.5@TRIM36 ENST00000513154.5 protein_coding 115169608,115163518,115147069,115144598,115141279,115137363,115137000,115133860,115130592,115124763 115169961,115163752,115147394,115144744,115141374,115137616,115137124,115134147,115130889,115126857 Gene ID= ENSG00000152503.9 TPM= 6.34 Transcript Type= protein_coding chr5 115171102 115180546 115171102 115180546 - ENST00000379618.6@TRIM36 ENST00000379618.6 protein_coding 115179975,115171102 115180546,115171222 Gene ID= ENSG00000152503.9 TPM= 1.81 Transcript Type= protein_coding chr5 115267188 115296831 115267188 115296831 - ENST00000379611.9@CCDC112 ENST00000379611.9 protein_coding 115296427,115284787,115279647,115276965,115275994,115275216,115271213,115269703,115268882,115267188 115296831,115284908,115279768,115277054,115276069,115275606,115271626,115269798,115269000,115267918 Gene ID= ENSG00000164221.12 TPM= 2.72 Transcript Type= protein_coding chr5 115520908 115544894 115520908 115544894 - ENST00000274457.4@FEM1C ENST00000274457.4 protein_coding 115544523,115542950,115520908 115544894,115543683,115525617 Gene ID= ENSG00000145780.7 TPM= 7.24 Transcript Type= protein_coding chr5 115578651 115626014 115578651 115626014 - ENST00000333314.3@TMED7-TICAM2 ENST00000333314.3 protein_coding 115625601,115620435,115616318,115578651 115626014,115620680,115616445,115581315 Gene ID= ENSG00000251201.8 TPM= 4.53 Transcript Type= protein_coding chr5 115578650 115602479 115578650 115602479 - ENST00000427199.2@TICAM2 ENST00000427199.2 protein_coding 115602097,115578650 115602479,115581315 Gene ID= ENSG00000243414.5 TPM= 6.34 Transcript Type= protein_coding chr5 115613508 115626173 115613508 115626173 - ENST00000456936.3@TMED7 ENST00000456936.3 protein_coding 115625601,115620435,115613508 115626173,115620680,115616445 Gene ID= ENSG00000134970.13 TPM= 128.59 Transcript Type= protein_coding chr5 115804733 115816954 115804733 115816954 - ENST00000250535.4@CDO1 ENST00000250535.4 protein_coding 115816228,115813181,115811161,115806349,115804733 115816954,115813258,115811315,115806518,115805462 Gene ID= ENSG00000129596.4 TPM= 10.87 Transcript Type= protein_coding chr5 115828200 115841858 115828200 115841858 - ENST00000509910.1@ATG12 ENST00000509910.1 protein_coding 115841390,115837628,115832602,115828200 115841858,115837764,115832664,115831863 Gene ID= ENSG00000145782.12 TPM= 34.41 Transcript Type= protein_coding chr5 115841481 115914081 115841481 115914081 + ENST00000316788.11@AP3S1 ENST00000316788.11 protein_coding 115841481,115866670,115870017,115895087,115902885,115913362 115842106,115866761,115870128,115895158,115902992,115914081 Gene ID= ENSG00000177879.15 TPM= 93.27 Transcript Type= protein_coding chr5 115841900 115914084 115841900 115914084 + transcript1534.chr5.nic@AP3S1 transcript1534.chr5.nic protein_coding 115841900,115866670,115870017,115895087,115913362 115842106,115866761,115870128,115895158,115914084 Gene ID= ENSG00000177879.15 TPM= 3.62 Transcript Type= NA chr5 115841936 115914085 115841936 115914085 + transcript1535.chr5.nnic@AP3S1 transcript1535.chr5.nnic protein_coding 115841936,115866670,115870017,115902885,115913362 115842106,115866761,115870128,115902992,115914085 Gene ID= ENSG00000177879.15 TPM= 7.24 Transcript Type= NA chr5 116084976 116258535 116084976 116258535 + transcript1541.chr5.nnic@COMMD10 transcript1541.chr5.nnic protein_coding 116084976,116087497,116091079,116092545,116134068,116257082 116085093,116087587,116091189,116092700,116134178,116258535 Gene ID= ENSG00000145781.8 TPM= 1.81 Transcript Type= NA chr5 116443556 116574826 116443556 116574826 - transcript1544.chr5.nic@SEMA6A transcript1544.chr5.nic protein_coding 116574185,116504845,116502210,116497327,116496251,116495413,116491740,116488888,116488108,116486749,116482444,116480122,116478014,116477846,116475545,116473073,116467583,116443556 116574826,116504982,116502327,116497387,116496313,116495514,116491830,116489007,116488196,116486966,116482575,116480277,116478154,116477926,116475603,116473093,116467747,116447811 Gene ID= ENSG00000092421.16 TPM= 39.84 Transcript Type= NA chr5 119354314 119399688 119354314 119399688 + ENST00000504771.2@TNFAIP8 ENST00000504771.2 protein_coding 119354314,119392816 119356121,119399688 Gene ID= ENSG00000145779.7 TPM= 5.43 Transcript Type= protein_coding chr5 119452681 119542334 119452681 119542334 + transcript1558.chr5.nic@HSD17B4 transcript1558.chr5.nic protein_coding 119452681,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905 119452821,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542334 Gene ID= ENSG00000133835.14 TPM= 10.64 Transcript Type= NA chr5 119452443 119542333 119452443 119542333 + ENST00000256216.10@HSD17B4 ENST00000256216.10 protein_coding 119452443,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905 119452633,119456368,119474015,119474460,119475727,119475870,119477501,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542333 Gene ID= ENSG00000133835.14 TPM= 234.31 Transcript Type= protein_coding chr5 119452753 119542332 119452753 119542332 + ENST00000414835.6@HSD17B4 ENST00000414835.6 protein_coding 119452753,119456315,119473908,119474401,119475706,119475824,119477417,119478834,119489192,119492100,119493818,119496543,119499317,119502041,119506818,119509141,119514981,119525216,119525917,119527133,119529894,119531266,119536423,119541905 119452821,119456368,119474015,119474460,119475727,119475870,119477492,119479021,119489283,119492124,119493946,119496646,119499553,119502092,119506889,119509244,119515046,119525285,119526023,119527219,119529980,119531404,119536550,119542332 Gene ID= ENSG00000133835.14 TPM= 8.83 Transcript Type= protein_coding chr5 122063195 122078285 122063195 122078285 - ENST00000231004.4@LOX ENST00000231004.4 protein_coding 122077355,122076893,122075404,122074013,122070494,122070053,122063195 122078285,122077001,122075541,122074169,122070589,122070168,122066749 Gene ID= ENSG00000113083.13 TPM= 8.15 Transcript Type= protein_coding chr5 122774996 122830108 122774996 122830108 + ENST00000379516.6@SNX2 ENST00000379516.6 protein_coding 122774996,122795266,122799692,122801869,122802081,122803472,122808277,122815896,122816915,122817280,122818818,122826050,122827379,122827575,122829598 122775211,122795383,122799855,122801935,122802124,122803613,122808355,122815971,122817028,122817373,122819023,122826193,122827459,122827646,122830108 Gene ID= ENSG00000205302.6 TPM= 96.89 Transcript Type= protein_coding chr5 122845449 123009212 122845449 123009212 + ENST00000261369.8@SNX24 ENST00000261369.8 protein_coding 122845449,122936734,122946055,122999912,123001405,123001940,123007682 122845693,122936817,122946159,123000006,123001437,123002004,123009212 Gene ID= ENSG00000064652.10 TPM= 9.06 Transcript Type= protein_coding chr5 123023390 123036736 123023390 123036736 - transcript1579.chr5.nic@PPIC transcript1579.chr5.nic protein_coding 123036509,123025784,123023390 123036736,123029418,123024003 Gene ID= ENSG00000168938.5 TPM= 2.72 Transcript Type= NA chr5 123344885 123423303 123344885 123423303 - ENST00000306467.9@CEP120 ENST00000306467.9 protein_coding 123422950,123418359,123416010,123412399,123399136,123393300,123391110,123389924,123388432,123386518,123384951,123382986,123382737,123382111,123378336,123377374,123372650,123364496,123349944,123344885 123423303,123418515,123416124,123412540,123399284,123393497,123391337,123390140,123388606,123386667,123385133,123383082,123382889,123382200,123378428,123377535,123372772,123364594,123350089,123346753 Gene ID= ENSG00000168944.15 TPM= 8.15 Transcript Type= protein_coding chr5 123512099 123617040 123512099 123617040 + ENST00000345990.8@CSNK1G3 ENST00000345990.8 protein_coding 123512099,123545417,123553107,123557495,123573393,123575729,123588068,123588427,123590413,123591319,123604724,123605339,123614342 123512570,123545841,123553147,123557564,123573541,123575963,123588153,123588511,123590558,123591414,123604830,123605362,123617040 Gene ID= ENSG00000151292.17 TPM= 17.21 Transcript Type= protein_coding chr5 126423461 126494159 126423461 126494159 + transcript1589.chr5.nic@GRAMD2B transcript1589.chr5.nic protein_coding 126423461,126465377,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126492915 126423689,126465545,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494159 Gene ID= ENSG00000155324.9 TPM= 1.81 Transcript Type= NA chr5 126423146 126494371 126423146 126494371 + ENST00000285689.7@GRAMD2B ENST00000285689.7 protein_coding 126423146,126465426,126469677,126472238,126473265,126477692,126480456,126480627,126483463,126484402,126485686,126486873,126488799,126492915 126423689,126465545,126469788,126472304,126473368,126477787,126480527,126480707,126483574,126484524,126485773,126486977,126488892,126494371 Gene ID= ENSG00000155324.9 TPM= 30.79 Transcript Type= protein_coding chr5 126541841 126595418 126541841 126595418 - ENST00000409134.7@ALDH7A1 ENST00000409134.7 protein_coding 126595007,126593351,126592664,126583932,126582851,126577079,126575420,126570782,126568259,126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126541841 126595418,126593404,126592729,126584012,126582974,126577211,126575464,126570859,126568356,126561124,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019 Gene ID= ENSG00000164904.17 TPM= 97.35 Transcript Type= protein_coding chr5 126544757 126562422 126544757 126562422 - ENST00000497231.7@ALDH7A1 ENST00000497231.7 protein_coding 126561083,126559240,126555931,126554287,126552021,126550196,126549929,126546324,126544757 126562422,126559334,126556015,126554393,126552137,126550293,126550002,126546399,126545019 Gene ID= ENSG00000164904.17 TPM= 4.07 Transcript Type= retained_intron chr5 126600918 126627250 126600918 126627250 + transcript1594.chr5.nnic@PHAX transcript1594.chr5.nnic protein_coding 126600918,126603570,126608364,126617250,126624575,126625973 126601058,126604183,126608484,126617333,126625309,126627250 Gene ID= ENSG00000164902.13 TPM= 6.79 Transcript Type= NA chr5 126600918 126627250 126600918 126627250 + transcript1596.chr5.nnic@PHAX transcript1596.chr5.nnic protein_coding 126600918,126603570,126608364,126617250,126624575,126625747 126601058,126604183,126608484,126617333,126625526,126627250 Gene ID= ENSG00000164902.13 TPM= 6.79 Transcript Type= NA chr5 126600268 126627252 126600268 126627252 + ENST00000297540.4@PHAX ENST00000297540.4 protein_coding 126600268,126603570,126608364,126617250,126624575 126601058,126604183,126608484,126617333,126627252 Gene ID= ENSG00000164902.13 TPM= 11.32 Transcript Type= protein_coding chr5 126867714 127030808 126867714 127030808 - ENST00000308660.5@MARCH3 ENST00000308660.5 protein_coding 127030350,126917984,126914930,126878185,126867714 127030808,126918227,126915134,126878394,126870791 Gene ID= ENSG00000173926.5 TPM= 9.96 Transcript Type= protein_coding chr5 127051308 127073577 127051308 127073577 - transcript1608.chr5.nic@C5orf63 transcript1608.chr5.nic protein_coding 127073451,127071584,127058882,127056397,127052613,127051308 127073577,127071685,127059002,127056506,127052669,127051947 Gene ID= ENSG00000164241.13 TPM= 4.53 Transcript Type= NA chr5 127051304 127073492 127051304 127073492 - ENST00000296662.9@C5orf63 ENST00000296662.9 protein_coding 127073451,127071584,127058882,127052613,127051304 127073492,127071685,127059002,127052669,127051947 Gene ID= ENSG00000164241.13 TPM= 1.81 Transcript Type= protein_coding chr5 127290709 127461213 127290709 127461213 + transcript1612.chr5.nnic@MEGF10 transcript1612.chr5.nnic protein_coding 127290709,127299996,127331291,127339120,127340530,127369910,127375335,127396532,127398676,127402546,127410389,127417638,127419120,127420044,127422670,127433363,127434687,127435361,127438439,127440739,127442998,127445457,127447557,127449099,127454566,127455401,127457128 127291056,127300046,127331424,127339221,127340630,127370002,127375419,127396778,127398796,127402682,127410601,127417812,127419240,127420207,127422772,127433509,127434821,127435489,127438567,127440867,127443126,127445693,127447684,127449222,127454610,127455607,127461213 Gene ID= ENSG00000145794.16 TPM= 2.72 Transcript Type= NA chr5 127290831 127461222 127290831 127461222 + ENST00000503335.6@MEGF10 ENST00000503335.6 protein_coding 127290831,127331291,127339120,127340530,127369910,127396532,127398676,127402546,127410389,127417638,127419120,127420044,127422670,127433363,127434687,127435361,127438439,127440739,127442998,127445457,127447557,127449099,127454566,127455401,127457128 127291056,127331424,127339221,127340630,127370002,127396778,127398796,127402682,127410601,127417812,127419240,127420207,127422772,127433509,127434821,127435489,127438567,127440867,127443126,127445693,127447684,127449222,127454610,127455607,127461222 Gene ID= ENSG00000145794.16 TPM= 2.72 Transcript Type= protein_coding chr5 127517609 127555089 127517609 127555089 + ENST00000296666.12@PRRC1 ENST00000296666.12 protein_coding 127517609,127523460,127524531,127526618,127530294,127533623,127539040,127547819,127551707 127517776,127523582,127524920,127526778,127530396,127533786,127539143,127547921,127555089 Gene ID= ENSG00000164244.20 TPM= 34.41 Transcript Type= protein_coding chr5 127517676 127555086 127517676 127555086 + transcript1619.chr5.nic@PRRC1 transcript1619.chr5.nic protein_coding 127517676,127523460,127524531,127526618,127530294,127533623,127539040,127547819,127551707 127517999,127523582,127524920,127526778,127530396,127533786,127539143,127547921,127555086 Gene ID= ENSG00000164244.20 TPM= 6.34 Transcript Type= NA chr5 127940426 128083100 127940426 128083100 - ENST00000499346.6@LINC01184 ENST00000499346.6 lincRNA 128082735,128061144,127956804,127940426 128083100,128061244,127956921,127941220 Gene ID= ENSG00000245937.7 TPM= 5.43 Transcript Type= lincRNA chr5 127965884 128083096 127965884 128083096 - transcript1628.chr5.nic@LINC01184 transcript1628.chr5.nic lincRNA 128082735,128061144,127965884 128083096,128061244,127966928 Gene ID= ENSG00000245937.7 TPM= 2.72 Transcript Type= NA chr5 127966457 128083070 127966457 128083070 - transcript1629.chr5.nic@LINC01184 transcript1629.chr5.nic lincRNA 128082970,128061144,127966457 128083070,128061244,127966928 Gene ID= ENSG00000245937.7 TPM= 1.81 Transcript Type= NA chr5 128021528 128083074 128021528 128083074 - ENST00000501702.6@LINC01184 ENST00000501702.6 lincRNA 128082970,128061144,128021528 128083074,128061244,128024298 Gene ID= ENSG00000245937.7 TPM= 1.81 Transcript Type= lincRNA chr5 128083766 128189688 128083766 128189688 + ENST00000262461.6@SLC12A2 ENST00000262461.6 protein_coding 128083766,128112814,128114212,128114586,128131067,128134165,128135700,128138597,128138824,128141830,128147622,128148754,128149997,128151241,128152706,128158053,128161660,128167761,128171667,128174541,128177105,128178567,128180883,128182855,128184366,128184789,128186496 128084710,128112933,128114287,128114681,128131206,128134275,128135808,128138724,128138908,128141981,128147729,128148877,128150098,128151396,128152805,128158164,128161800,128167867,128171746,128174666,128177152,128178689,128180994,128182941,128184501,128184856,128189688 Gene ID= ENSG00000064651.13 TPM= 19.02 Transcript Type= protein_coding chr5 128257909 128538042 128257909 128538042 - ENST00000262464.8@FBN2 ENST00000262464.8 protein_coding 128537350,128536402,128530595,128527872,128519273,128464724,128446481,128408674,128395122,128393135,128392018,128378771,128377752,128376731,128374628,128369182,128366377,128364600,128361723,128357276,128350868,128349955,128349347,128345357,128344385,128338933,128337997,128335988,128335455,128335170,128334719,128332912,128330573,128328696,128318879,128318149,128312634,128311885,128311300,128309983,128309247,128307135,128305823,128305511,128304957,128302973,128301382,128300817,128291529,128290732,128289882,128289127,128288438,128287308,128286718,128280192,128278635,128277880,128276038,128274567,128273840,128271999,128263425,128261736,128257909 128538042,128536484,128530693,128527967,128519368,128464921,128446606,128408799,128395274,128393368,128392155,128378890,128377877,128376853,128374750,128369334,128366430,128364725,128361848,128357395,128351005,128350005,128349472,128345584,128344510,128339061,128338122,128336113,128335577,128335295,128334844,128333034,128330695,128328821,128319001,128318271,128312795,128311953,128311425,128310108,128309399,128307203,128305948,128305636,128305082,128303089,128301510,128300936,128291654,128290884,128289947,128289252,128288557,128287430,128286849,128280317,128278841,128278005,128276160,128274683,128273968,128272118,128263656,128261907,128259829 Gene ID= ENSG00000138829.11 TPM= 1.81 Transcript Type= protein_coding chr5 128328082 128538245 128328082 128538245 - transcript1634.chr5.nic@FBN2 transcript1634.chr5.nic protein_coding 128537350,128536402,128530595,128527872,128519273,128464724,128446481,128408674,128395122,128393135,128392018,128378771,128377752,128376731,128374628,128369182,128366377,128364600,128361723,128357276,128350868,128349955,128349347,128345357,128344385,128338933,128337997,128335988,128335455,128335170,128334719,128332912,128330573,128328082 128538245,128536484,128530693,128527967,128519368,128464921,128446606,128408799,128395274,128393368,128392155,128378890,128377877,128376853,128374750,128369334,128366430,128364725,128361848,128357395,128351005,128350005,128349472,128345584,128344510,128339061,128338122,128336113,128335577,128335295,128334844,128333034,128330695,128328821 Gene ID= ENSG00000138829.11 TPM= 4.53 Transcript Type= NA chr5 128965478 129036767 128965478 129036767 + transcript1638.chr5.nnic@SLC27A6 transcript1638.chr5.nnic protein_coding 128965478,128965978,128985133,128988600,128990340,129015885,129023620,129027133,129028345,129029577,129033106 128965692,128966618,128985336,128988758,128990464,129016079,129023710,129027331,129028442,129029707,129036767 Gene ID= ENSG00000113396.12 TPM= 8.15 Transcript Type= NA chr5 129094748 129114020 129094748 129114020 + transcript1645.chr5.nic@ISOC1 transcript1645.chr5.nic protein_coding 129094748,129104956,129105185,129106946,129112855 129095048,129105075,129105388,129107062,129114020 Gene ID= ENSG00000066583.11 TPM= 3.62 Transcript Type= NA chr5 129094751 129114028 129094751 129114028 + ENST00000173527.5@ISOC1 ENST00000173527.5 protein_coding 129094751,129104956,129105185,129106946,129112855 129095075,129105075,129105388,129107062,129114028 Gene ID= ENSG00000066583.11 TPM= 96.89 Transcript Type= protein_coding chr5 131159335 131165333 131159335 131165333 - ENST00000513345.5@HINT1 ENST00000513345.5 protein_coding 131165060,131162572,131159335 131165333,131162676,131159611 Gene ID= ENSG00000169567.11 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr5 131170810 131205426 131170810 131205426 + ENST00000379380.8@LYRM7 ENST00000379380.8 protein_coding 131170810,131180095,131182229,131187028,131199531 131171038,131180167,131182299,131187109,131205426 Gene ID= ENSG00000186687.15 TPM= 24.45 Transcript Type= protein_coding chr5 131264014 131394672 131264014 131394672 + transcript1654.chr5.nnic@CDC42SE2 transcript1654.chr5.nnic protein_coding 131264014,131315976,131359209,131385543,131390993,131391829 131264166,131316144,131359547,131385644,131391108,131394672 Gene ID= ENSG00000158985.13 TPM= 21.43 Transcript Type= NA chr5 131264009 131394687 131264009 131394687 + ENST00000395246.5@CDC42SE2 ENST00000395246.5 protein_coding 131264009,131359209,131385543,131390993,131391918 131264166,131359547,131385644,131391108,131394687 Gene ID= ENSG00000158985.13 TPM= 2.42 Transcript Type= protein_coding chr5 131264075 131394690 131264075 131394690 + ENST00000360515.7@CDC42SE2 ENST00000360515.7 protein_coding 131264075,131315976,131359209,131385543,131390993,131391918 131264166,131316144,131359547,131385644,131391108,131394690 Gene ID= ENSG00000158985.13 TPM= 3.32 Transcript Type= protein_coding chr5 131425908 131431202 131425908 131431202 - transcript1658.chr5.nic@AC008695.1 transcript1658.chr5.nic protein_coding 131430859,131428902,131425908 131431202,131429216,131427291 Gene ID= ENSG00000273217.1 TPM= 1.81 Transcript Type= NA chr5 131641715 131797063 131641715 131797063 - ENST00000615660.4@FNIP1 ENST00000615660.4 protein_coding 131796830,131744564,131730904,131719317,131718986,131716565,131710578,131709201,131706411,131704065,131698917,131679029,131677703,131672686,131671505,131670463,131651802,131647090,131641715 131797063,131744690,131731038,131719417,131719060,131716656,131710661,131709272,131706546,131704266,131699002,131679175,131677872,131672924,131672661,131670631,131651999,131647205,131644763 Gene ID= ENSG00000217128.11 TPM= 6.34 Transcript Type= protein_coding chr5 131953902 132011613 131953902 132011613 - ENST00000296869.8@ACSL6 ENST00000296869.8 protein_coding 132011505,131994031,131990853,131990100,131989407,131988805,131988048,131986822,131985407,131976648,131974758,131973266,131972724,131971550,131970128,131967940,131966416,131962535,131960520,131959536,131953902 132011613,131994251,131990967,131990164,131989508,131988904,131988226,131986854,131985458,131976721,131974835,131973400,131972858,131971645,131970200,131968028,131966532,131962678,131960621,131959607,131954371 Gene ID= ENSG00000164398.12 TPM= 1.81 Transcript Type= protein_coding chr5 132191850 132227871 132191850 132227871 - transcript1669.chr5.nic@P4HA2 transcript1669.chr5.nic protein_coding 132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132191850 132227871,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080 Gene ID= ENSG00000072682.18 TPM= 10.87 Transcript Type= NA chr5 132192613 132227869 132192613 132227869 - transcript1672.chr5.nic@P4HA2 transcript1672.chr5.nic protein_coding 132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192613 132227869,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080 Gene ID= ENSG00000072682.18 TPM= 5.43 Transcript Type= NA chr5 132192610 132228082 132192610 132228082 - ENST00000360568.7@P4HA2 ENST00000360568.7 protein_coding 132227790,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610 132228082,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080 Gene ID= ENSG00000072682.18 TPM= 12.07 Transcript Type= protein_coding chr5 132192610 132227819 132192610 132227819 - ENST00000379086.5@P4HA2 ENST00000379086.5 protein_coding 132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198321,132195412,132194926,132192610 132227819,132227258,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198380,132195480,132195022,132193080 Gene ID= ENSG00000072682.18 TPM= 3.02 Transcript Type= protein_coding chr5 132192610 132227857 132192610 132227857 - ENST00000166534.8@P4HA2 ENST00000166534.8 protein_coding 132227790,132227086,132218545,132217752,132217197,132213916,132210284,132209138,132207708,132204082,132203748,132198879,132198206,132195412,132194926,132192610 132227857,132227221,132218644,132217848,132217348,132214053,132210523,132209331,132207884,132204152,132203847,132198932,132198271,132195480,132195022,132193080 Gene ID= ENSG00000072682.18 TPM= 3.02 Transcript Type= protein_coding chr5 132293745 132344199 132293745 132344199 + transcript1678.chr5.nnic@SLC22A4 transcript1678.chr5.nnic protein_coding 132293745,132312161,132313614,132327277,132331756,132334718,132335818,132340565,132343760 132295009,132312264,132313768,132327403,132331850,132334932,132336000,132340700,132344199 Gene ID= ENSG00000197208.5 TPM= 1.81 Transcript Type= NA chr5 132294443 132344206 132294443 132344206 + ENST00000200652.3@SLC22A4 ENST00000200652.3 protein_coding 132294443,132312161,132313614,132322184,132327277,132331756,132334718,132335818,132340565,132343760 132295009,132312264,132313768,132322355,132327403,132331850,132334932,132336000,132340700,132344206 Gene ID= ENSG00000197208.5 TPM= 1.81 Transcript Type= protein_coding chr5 132369752 132395614 132369752 132395614 + ENST00000245407.7@SLC22A5 ENST00000245407.7 protein_coding 132369752,132378378,132384147,132385328,132387025,132388921,132390690,132392433,132393676,132394185 132370365,132378481,132384301,132385499,132387151,132389021,132390904,132392615,132393811,132395614 Gene ID= ENSG00000197375.12 TPM= 33.51 Transcript Type= protein_coding chr5 132410636 132476044 132410636 132476044 + ENST00000378953.8@C5orf56 ENST00000378953.8 protein_coding 132410636,132419823,132449650,132475667 132411041,132419940,132449689,132476044 Gene ID= ENSG00000197536.11 TPM= 15.39 Transcript Type= protein_coding chr5 132410917 132476039 132410917 132476039 + transcript1689.chr5.nnic@AC116366.3 transcript1689.chr5.nnic protein_coding 132410917,132419823,132475667 132411041,132419940,132476039 Gene ID= ENSG00000283782.1 TPM= 1.81 Transcript Type= NA chr5 132481609 132490798 132481609 132490798 - ENST00000245414.8@IRF1 ENST00000245414.8 protein_coding 132490545,132489392,132487926,132486954,132486795,132486557,132486251,132485667,132484362,132481609 132490798,132489483,132488025,132487130,132486844,132486686,132486373,132485716,132484497,132484075 Gene ID= ENSG00000125347.13 TPM= 21.73 Transcript Type= protein_coding chr5 132692628 132737638 132692628 132737638 - ENST00000378746.8@KIF3A ENST00000378746.8 protein_coding 132737414,132734205,132726354,132726128,132720609,132716845,132716245,132715757,132710959,132703463,132702885,132702558,132702087,132700647,132700216,132699171,132692628 132737638,132734478,132726498,132726212,132720714,132716984,132716442,132715931,132711057,132703619,132703065,132702668,132702212,132700700,132700284,132699295,132696682 Gene ID= ENSG00000131437.15 TPM= 6.34 Transcript Type= protein_coding chr5 132756005 132777380 132756005 132777380 - transcript1705.chr5.nic@SEPT8 transcript1705.chr5.nic protein_coding 132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132756005 132777380,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992 Gene ID= ENSG00000164402.13 TPM= 3.02 Transcript Type= NA chr5 132750817 132777375 132750817 132777375 - ENST00000378719.6@SEPT8 ENST00000378719.6 protein_coding 132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132750817 132777375,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132752181 Gene ID= ENSG00000164402.13 TPM= 2.11 Transcript Type= protein_coding chr5 132756001 132777421 132756001 132777421 - ENST00000296873.11@SEPT8 ENST00000296873.11 protein_coding 132777108,132765409,132764224,132763706,132762484,132761800,132761458,132761133,132760802,132756001 132777421,132765529,132764419,132763892,132762645,132761896,132761626,132761265,132760992,132758824 Gene ID= ENSG00000164402.13 TPM= 22.03 Transcript Type= protein_coding chr5 132822143 132830683 132822143 132830683 - transcript1706.chr5.nnic@SHROOM1 transcript1706.chr5.nnic protein_coding 132830594,132827461,132825163,132825018,132824615,132823850,132823623,132823250,132822143 132830683,132827588,132826182,132825073,132824821,132824419,132823764,132823522,132823128 Gene ID= ENSG00000164403.14 TPM= 4.53 Transcript Type= NA chr5 132822143 132830715 132822143 132830715 - transcript1708.chr5.nic@SHROOM1 transcript1708.chr5.nic protein_coding 132830594,132825163,132825018,132824615,132823850,132823623,132823250,132822143 132830715,132826182,132825073,132824821,132824419,132823764,132823522,132823128 Gene ID= ENSG00000164403.14 TPM= 3.62 Transcript Type= NA chr5 132866568 132875030 132866568 132875030 + transcript1712.chr5.nnic@UQCRQ transcript1712.chr5.nnic protein_coding 132866568,132866869,132867488,132873950,132874410 132866687,132867035,132867708,132874089,132875030 Gene ID= ENSG00000164405.10 TPM= 371.27 Transcript Type= NA chr5 132866642 132867699 132866642 132867699 + ENST00000496429.1@UQCRQ ENST00000496429.1 protein_coding 132866642,132867488 132866687,132867699 Gene ID= ENSG00000164405.10 TPM= 760.66 Transcript Type= processed_transcript chr5 132866630 132867687 132866630 132867687 + ENST00000378667.1@UQCRQ ENST00000378667.1 protein_coding 132866630,132866869,132867488 132866691,132867035,132867687 Gene ID= ENSG00000164405.10 TPM= 27.17 Transcript Type= protein_coding chr5 132866646 132867683 132866646 132867683 + ENST00000378665.1@UQCRQ ENST00000378665.1 protein_coding 132866646,132867488 132867035,132867683 Gene ID= ENSG00000164405.10 TPM= 9.96 Transcript Type= protein_coding chr5 133019038 133026589 133019038 133026589 - ENST00000504170.2@ZCCHC10 ENST00000504170.2 protein_coding 133026497,133022841,133019038 133026589,133022906,133019203 Gene ID= ENSG00000155329.11 TPM= 5.43 Transcript Type= protein_coding chr5 132996996 133026549 132996996 133026549 - ENST00000355372.6@ZCCHC10 ENST00000355372.6 protein_coding 133026497,133022841,133006759,133000132,132996996 133026549,133022906,133006920,133000173,132998832 Gene ID= ENSG00000155329.11 TPM= 1.81 Transcript Type= protein_coding chr5 132996985 133026604 132996985 133026604 - ENST00000324170.7@ZCCHC10 ENST00000324170.7 protein_coding 133026497,133006759,133000132,132996985 133026604,133006920,133000173,132998850 Gene ID= ENSG00000155329.11 TPM= 16.3 Transcript Type= protein_coding chr5 133051962 133106449 133051962 133106449 + ENST00000304858.6@HSPA4 ENST00000304858.6 protein_coding 133051962,133064980,133067417,133070374,133073230,133073993,133076654,133086782,133088404,133089055,133089562,133091193,133092700,133096098,133097161,133099545,133101759,133103865,133104233 133052357,133065037,133067557,133070496,133073329,133074126,133076898,133086858,133088555,133089161,133089695,133091374,133092789,133096250,133097286,133099652,133101878,133104026,133106449 Gene ID= ENSG00000170606.14 TPM= 119.53 Transcript Type= protein_coding chr5 133270122 133612550 133270122 133612550 - transcript1732.chr5.nnic@FSTL4 transcript1732.chr5.nnic protein_coding 133612325,133603858,133567186,133400738,133316459,133312654,133270122 133612550,133603993,133567219,133400986,133316652,133312777,133270663 Gene ID= ENSG00000053108.16 TPM= 1.81 Transcript Type= NA chr5 133955502 133968787 133955502 133968787 - ENST00000231512.4@C5orf15 ENST00000231512.4 protein_coding 133968446,133959494,133955502 133968787,133960020,133956990 Gene ID= ENSG00000113583.7 TPM= 128.59 Transcript Type= protein_coding chr5 134114943 134148208 134114943 134148208 + transcript1746.chr5.nic@TCF7 transcript1746.chr5.nic protein_coding 134114943,134115321,134115909,134138059,134138951,134140796,134142185,134142721,134142993,134143592,134146224 134115155,134115387,134116033,134138164,134139038,134140888,134142304,134142883,134143100,134143640,134148208 Gene ID= ENSG00000081059.19 TPM= 3.17 Transcript Type= NA chr5 134114711 134147997 134114711 134147997 + ENST00000342854.9@TCF7 ENST00000342854.9 protein_coding 134114711,134115321,134115909,134138059,134138951,134142185,134142721,134142993,134143592,134146224 134115155,134115387,134116033,134138164,134139038,134142304,134142883,134143100,134143640,134147997 Gene ID= ENSG00000081059.19 TPM= 4.07 Transcript Type= protein_coding chr5 134148935 134177038 134148935 134177038 - ENST00000353411.10@SKP1 ENST00000353411.10 protein_coding 134176855,134173926,134167170,134160987,134158455,134148935 134177038,134174022,134167243,134161130,134158595,134157768 Gene ID= ENSG00000113558.18 TPM= 673.27 Transcript Type= protein_coding chr5 134194334 134226142 134194334 134226142 - ENST00000481195.5@PPP2CA ENST00000481195.5 protein_coding 134225760,134205922,134201848,134200985,134200335,134199086,134194334 134226142,134206131,134202021,134201074,134200496,134199204,134197844 Gene ID= ENSG00000113575.9 TPM= 248.12 Transcript Type= protein_coding chr5 134402087 134411898 134402087 134411898 - ENST00000458198.2@CDKN2AIPNL ENST00000458198.2 protein_coding 134411616,134409903,134402087 134411898,134410002,134402926 Gene ID= ENSG00000237190.3 TPM= 32.6 Transcript Type= protein_coding chr5 134524313 134579474 134524313 134579474 + transcript1777.chr5.nic@JADE2 transcript1777.chr5.nic protein_coding 134524313,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134576768,134578494 134524429,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134576896,134579474 Gene ID= ENSG00000043143.20 TPM= 1.81 Transcript Type= NA chr5 134525615 134580988 134525615 134580988 + transcript1780.chr5.nic@JADE2 transcript1780.chr5.nic protein_coding 134525615,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134576768,134578497 134526011,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134576896,134580988 Gene ID= ENSG00000043143.20 TPM= 3.62 Transcript Type= NA chr5 134526605 134579474 134526605 134579474 + transcript1782.chr5.nic@JADE2 transcript1782.chr5.nic protein_coding 134526605,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134576768,134578497 134526758,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134576896,134579474 Gene ID= ENSG00000043143.20 TPM= 1.81 Transcript Type= NA chr5 134525615 134579474 134525615 134579474 + transcript1786.chr5.nic@JADE2 transcript1786.chr5.nic protein_coding 134525615,134535858,134537989,134552052,134559830,134560746,134562200,134564494,134566116,134573645,134578497 134526011,134535915,134538083,134552209,134559990,134560957,134562367,134564610,134566580,134573762,134579474 Gene ID= ENSG00000043143.20 TPM= 4.53 Transcript Type= NA chr5 134601144 134632988 134601144 134632988 - ENST00000402673.6@SAR1B ENST00000402673.6 protein_coding 134632728,134623962,134620933,134612691,134609571,134608372,134601144 134632988,134624037,134621052,134612756,134609674,134608503,134607066 Gene ID= ENSG00000152700.13 TPM= 100.52 Transcript Type= protein_coding chr5 134738501 134752160 134738501 134752160 + ENST00000297156.3@CAMLG ENST00000297156.3 protein_coding 134738501,134741063,134743987,134750759 134738792,134741523,134744052,134752160 Gene ID= ENSG00000164615.4 TPM= 24 Transcript Type= protein_coding chr5 134738583 134751377 134738583 134751377 + ENST00000514518.1@CAMLG ENST00000514518.1 protein_coding 134738583,134743987,134750759 134738792,134744052,134751377 Gene ID= ENSG00000164615.4 TPM= 4.07 Transcript Type= protein_coding chr5 134758736 134829196 134758736 134829196 + transcript1806.chr5.nnic@DDX46 transcript1806.chr5.nnic protein_coding 134758736,134763904,134766917,134770903,134773696,134777574,134781133,134781921,134782945,134784366,134785465,134788513,134790106,134790470,134794850,134795988,134807748,134811221,134811696,134816430,134817496,134818860,134826947,134828659 134758955,134764092,134767060,134770999,134773861,134777725,134781246,134782086,134783065,134784541,134785586,134788591,134790222,134790552,134795014,134796150,134807941,134811358,134811845,134816610,134817714,134819004,134827020,134829196 Gene ID= ENSG00000145833.15 TPM= 1.81 Transcript Type= NA chr5 134845988 134859737 134845988 134859737 + ENST00000394976.3@C5orf24 ENST00000394976.3 protein_coding 134845988,134854898 134846212,134859737 Gene ID= ENSG00000181904.8 TPM= 27.17 Transcript Type= protein_coding chr5 134874025 134901510 134874025 134901510 + transcript1815.chr5.nnic@TXNDC15 transcript1815.chr5.nnic protein_coding 134874025,134887695,134893492,134896294,134899489,134901042 134874530,134888182,134893655,134896424,134900384,134901510 Gene ID= ENSG00000113621.14 TPM= 58.86 Transcript Type= NA chr5 134905173 134962651 134905173 134962651 + transcript1823.chr5.nnic@PCBD2 transcript1823.chr5.nnic protein_coding 134905173,134910335,134921942,134959040,134960586 134905223,134910466,134922115,134959120,134962651 Gene ID= ENSG00000132570.14 TPM= 2.72 Transcript Type= NA chr5 135027735 135034298 135027735 135034298 - ENST00000265340.11@PITX1 ENST00000265340.11 protein_coding 135033713,135031276,135027735 135034298,135031508,135029321 Gene ID= ENSG00000069011.15 TPM= 2.72 Transcript Type= protein_coding chr5 135334381 135399258 135334381 135399258 - transcript1833.chr5.nic@H2AFY transcript1833.chr5.nic protein_coding 135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334381 135399258,135389126,135370142,135369603,135360604,135350913,135346057,135343434,135335141 Gene ID= ENSG00000113648.16 TPM= 27.17 Transcript Type= NA chr5 135332644 135399455 135332644 135399455 - transcript1835.chr5.nic@H2AFY transcript1835.chr5.nic protein_coding 135399062,135388922,135370036,135369406,135360497,135352946,135345968,135343260,135332644 135399455,135389126,135370142,135369603,135360604,135353045,135346057,135343434,135335141 Gene ID= ENSG00000113648.16 TPM= 68.82 Transcript Type= NA chr5 135334410 135399211 135334410 135399211 - ENST00000312469.8@H2AFY ENST00000312469.8 protein_coding 135399062,135388922,135370036,135369406,135360497,135350823,135345968,135343260,135334410 135399211,135389126,135370142,135369603,135360607,135350913,135346057,135343434,135335141 Gene ID= ENSG00000113648.16 TPM= 48.9 Transcript Type= protein_coding chr5 135930331 135942180 135930331 135942180 + transcript1840.chr5.nic@FBXL21 transcript1840.chr5.nic transcribed_unitary_pseudogene 135930331,135934351,135935320,135936594,135937425,135940489 135930480,135934449,135935439,135936960,135937547,135942180 Gene ID= ENSG00000164616.15 TPM= 1.81 Transcript Type= NA chr5 136028895 136063817 136028895 136063817 + ENST00000442011.6@TGFBI ENST00000442011.6 protein_coding 136028895,136033763,136044058,136046335,136046851,136047274,136049439,136052907,136053943,136054716,136055680,136056665,136059090,136060834,136061500,136062663,136063186 136029189,136033861,136044122,136046495,136047015,136047420,136049580,136053119,136054080,136054861,136055816,136056795,136059214,136060936,136061579,136062687,136063817 Gene ID= ENSG00000120708.16 TPM= 76.07 Transcript Type= protein_coding chr5 136028963 136063818 136028963 136063818 + transcript1846.chr5.nic@TGFBI transcript1846.chr5.nic protein_coding 136028963,136033763,136044058,136046335,136047274,136049439,136052907,136053943,136054716,136055680,136056665,136059090,136060834,136061500,136062663,136063186 136029189,136033861,136044122,136047015,136047420,136049580,136053119,136054080,136054861,136055816,136056795,136059214,136060936,136061579,136062687,136063818 Gene ID= ENSG00000120708.16 TPM= 6.34 Transcript Type= NA chr5 136132845 136182732 136132845 136182732 + ENST00000545279.5@SMAD5 ENST00000545279.5 protein_coding 136132845,136147832,136153592,136160856,136163272,136172434,136174376,136177337 136132962,136147906,136154163,136161107,136163391,136172655,136174632,136182732 Gene ID= ENSG00000113658.16 TPM= 3.62 Transcript Type= protein_coding chr5 136132847 136182734 136132847 136182734 + ENST00000545620.5@SMAD5 ENST00000545620.5 protein_coding 136132847,136153592,136160856,136163272,136172434,136174376,136177337 136132962,136154163,136161107,136163391,136172655,136174632,136182734 Gene ID= ENSG00000113658.16 TPM= 4.53 Transcript Type= protein_coding chr5 137801193 137810751 137801193 137810751 + ENST00000510937.1@NPY6R ENST00000510937.1 transcribed_processed_pseudogene 137801193,137808024 137801452,137810751 Gene ID= ENSG00000226306.6 TPM= 3.62 Transcript Type= processed_transcript chr5 137937962 138033084 137937962 138033084 - transcript1860.chr5.nic@FAM13B transcript1860.chr5.nic protein_coding 138032782,138021031,138018955,138018302,138011768,138011008,138006990,137988274,137987461,137985257,137962405,137960166,137959616,137956477,137954166,137953336,137952628,137948955,137946228,137945902,137943133,137942875,137941944,137937962 138033084,138021197,138019146,138018514,138011945,138011149,138007147,137988315,137987616,137985389,137962469,137960214,137959763,137956542,137954376,137953465,137952709,137949184,137946311,137945997,137943216,137943038,137942045,137940348 Gene ID= ENSG00000031003.10 TPM= 4.53 Transcript Type= NA chr5 137937963 138033084 137937963 138033084 - transcript1866.chr5.nic@FAM13B transcript1866.chr5.nic protein_coding 138032782,138021031,138018302,138011768,138011008,138006990,137988274,137987461,137985257,137962405,137960166,137959616,137954166,137953336,137952628,137948955,137946228,137945902,137943133,137942875,137941944,137937963 138033084,138021197,138018514,138011945,138011149,138007147,137988315,137987616,137985389,137962469,137960214,137959763,137954376,137953465,137952709,137949184,137946311,137945997,137943216,137943038,137942045,137940348 Gene ID= ENSG00000031003.10 TPM= 2.72 Transcript Type= NA chr5 137937960 138033031 137937960 138033031 - ENST00000033079.7@FAM13B ENST00000033079.7 protein_coding 138032782,138021031,138018955,138018302,138011768,138011008,138006990,137988274,137987461,137985257,137962405,137960166,137959616,137954166,137953336,137952628,137948955,137946228,137945902,137943133,137942875,137941944,137937960 138033031,138021197,138019146,138018514,138011945,138011149,138007147,137988315,137987616,137985389,137962469,137960214,137959763,137954376,137953465,137952709,137949184,137946311,137945997,137943216,137943038,137942045,137940348 Gene ID= ENSG00000031003.10 TPM= 6.34 Transcript Type= protein_coding chr5 138115172 138139415 138115172 138139415 - ENST00000265191.3@NME5 ENST00000265191.3 protein_coding 138139371,138138652,138129263,138128479,138118818,138115172 138139415,138138785,138129468,138128579,138118936,138115764 Gene ID= ENSG00000112981.4 TPM= 9.06 Transcript Type= protein_coding chr5 138156897 138178677 138156897 138178677 - transcript1876.chr5.nic@BRD8 transcript1876.chr5.nic protein_coding 138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156897 138178677,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267 Gene ID= ENSG00000112983.17 TPM= 5.43 Transcript Type= NA chr5 138156897 138178677 138156897 138178677 - transcript1877.chr5.nic@BRD8 transcript1877.chr5.nic protein_coding 138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156897 138178677,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267 Gene ID= ENSG00000112983.17 TPM= 3.62 Transcript Type= NA chr5 138156897 138178677 138156897 138178677 - transcript1880.chr5.nic@BRD8 transcript1880.chr5.nic protein_coding 138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156897 138178677,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267 Gene ID= ENSG00000112983.17 TPM= 4.53 Transcript Type= NA chr5 138156897 138178669 138156897 138178669 - ENST00000411594.6@BRD8 ENST00000411594.6 protein_coding 138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138156897 138178669,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138157267 Gene ID= ENSG00000112983.17 TPM= 3.62 Transcript Type= protein_coding chr5 138156882 138178630 138156882 138178630 - ENST00000230901.9@BRD8 ENST00000230901.9 protein_coding 138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138168470,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882 138178630,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168688,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267 Gene ID= ENSG00000112983.17 TPM= 19.02 Transcript Type= protein_coding chr5 138156882 138178633 138156882 138178633 - ENST00000402931.5@BRD8 ENST00000402931.5 protein_coding 138178596,138177571,138172065,138171361,138171038,138170832,138170345,138169222,138167934,138166518,138165828,138164714,138164320,138164087,138163130,138162054,138161796,138160891,138160069,138159555,138156882 138178633,138177667,138172134,138171410,138171160,138170912,138170409,138169358,138168078,138166727,138166108,138165166,138164413,138164133,138163344,138162146,138161864,138161068,138160173,138159599,138157267 Gene ID= ENSG00000112983.17 TPM= 11.77 Transcript Type= protein_coding chr5 138205871 138213343 138205871 138213343 - ENST00000394884.7@CDC23 ENST00000394884.7 protein_coding 138213152,138212991,138205871 138213343,138213063,138206684 Gene ID= ENSG00000094880.10 TPM= 7.24 Transcript Type= protein_coding chr5 138187648 138213343 138187648 138213343 - ENST00000394886.6@CDC23 ENST00000394886.6 protein_coding 138213152,138212991,138206547,138202113,138201343,138201107,138198605,138198426,138198199,138192504,138192269,138191862,138191474,138189828,138189633,138187648 138213343,138213063,138206684,138202155,138201448,138201239,138198782,138198523,138198280,138192657,138192388,138191937,138191535,138189906,138189752,138189148 Gene ID= ENSG00000094880.10 TPM= 27.17 Transcript Type= protein_coding chr5 138338032 138349729 138338032 138349729 + ENST00000239906.9@FAM53C ENST00000239906.9 protein_coding 138338032,138341184,138341809,138344825,138346702 138338307,138341413,138341866,138345609,138349729 Gene ID= ENSG00000120709.10 TPM= 38.03 Transcript Type= protein_coding chr5 138352596 138437027 138352596 138437027 + ENST00000314358.9@KDM3B ENST00000314358.9 protein_coding 138352596,138372674,138375093,138377720,138379584,138381516,138386022,138391013,138393171,138398178,138399860,138415132,138417483,138418953,138420706,138424075,138425411,138426975,138427189,138427967,138429826,138430249,138431425,138435620 138352987,138372841,138375206,138377825,138379708,138381590,138386621,138392261,138393372,138398392,138400012,138415239,138417610,138419232,138420962,138424341,138425582,138427065,138427319,138428086,138429965,138430425,138431559,138437027 Gene ID= ENSG00000120733.13 TPM= 33.51 Transcript Type= protein_coding chr5 138439017 138446964 138439017 138446964 + ENST00000378339.6@REEP2 ENST00000378339.6 protein_coding 138439017,138441016,138441385,138444415,138444754,138445228,138445468,138445683 138439240,138441088,138441461,138444535,138444867,138445375,138445598,138446964 Gene ID= ENSG00000132563.15 TPM= 9.96 Transcript Type= protein_coding chr5 138465490 138469315 138465490 138469315 + ENST00000239938.4@EGR1 ENST00000239938.4 protein_coding 138465490,138466757 138466068,138469315 Gene ID= ENSG00000120738.7 TPM= 71.54 Transcript Type= protein_coding chr5 138506099 138543300 138506099 138543300 - ENST00000360541.9@ETF1 ENST00000360541.9 protein_coding 138543097,138542833,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138506099 138543300,138542936,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387 Gene ID= ENSG00000120705.12 TPM= 46.79 Transcript Type= protein_coding chr5 138506097 138542943 138506097 138542943 - transcript1905.chr5.nic@ETF1 transcript1905.chr5.nic protein_coding 138542833,138518692,138517561,138513568,138512764,138511475,138511045,138510565,138508669,138506097 138542943,138518867,138517700,138513706,138512954,138511604,138511200,138510629,138508816,138508387 Gene ID= ENSG00000120705.12 TPM= 8.76 Transcript Type= NA chr5 138506097 138543169 138506097 138543169 - transcript1906.chr5.nnic@ETF1 transcript1906.chr5.nnic protein_coding 138543097,138542833,138518692,138517561,138513568,138511475,138511045,138510565,138508669,138506097 138543169,138542936,138518867,138517700,138513706,138511604,138511200,138510629,138508816,138508387 Gene ID= ENSG00000120705.12 TPM= 2.42 Transcript Type= NA chr5 138554882 138575444 138554882 138575444 - ENST00000297185.7@HSPA9 ENST00000297185.7 protein_coding 138575238,138574068,138573763,138570960,138568925,138567649,138567455,138567001,138566626,138561580,138559864,138558553,138557869,138557402,138556774,138556452,138554882 138575444,138574126,138573850,138571141,138569049,138567722,138567561,138567163,138566718,138561789,138560091,138558657,138557986,138557496,138556866,138556592,138556114 Gene ID= ENSG00000113013.12 TPM= 973.46 Transcript Type= protein_coding chr5 138753423 138935034 138753423 138935034 + ENST00000302763.11@CTNNA1 ENST00000302763.11 protein_coding 138753423,138781923,138783177,138810038,138812183,138824530,138827515,138886212,138887490,138904349,138917742,138924510,138925256,138929246,138930473,138930830,138932578,138933802 138753510,138782029,138783372,138810204,138812302,138824799,138827718,138886292,138887642,138904441,138917898,138924710,138925407,138929356,138930654,138930935,138932712,138935034 Gene ID= ENSG00000044115.20 TPM= 568.38 Transcript Type= protein_coding chr5 138946720 139198398 138946720 139198398 - ENST00000394817.6@SIL1 ENST00000394817.6 protein_coding 139198269,139127739,139121035,139050938,139042620,139026801,139021171,138951788,138951171,138946720 139198398,139127853,139121173,139051046,139042719,139026992,139021292,138951884,138951335,138947473 Gene ID= ENSG00000120725.12 TPM= 308.18 Transcript Type= protein_coding chr5 138946995 138953433 138946995 138953433 - ENST00000515008.1@SIL1 ENST00000515008.1 protein_coding 138953332,138951788,138951171,138946995 138953433,138951884,138951335,138947473 Gene ID= ENSG00000120725.12 TPM= 3.17 Transcript Type= processed_transcript chr5 139293677 139330444 139293677 139330444 + transcript1967.chr5.nnic@MATR3 transcript1967.chr5.nnic protein_coding 139293677,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345 139293772,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330444 Gene ID= ENSG00000280987.4 TPM= 18.28 Transcript Type= NA chr5 139274103 139330394 139274103 139330394 + ENST00000361059.7@MATR3 ENST00000361059.7 protein_coding 139274103,139276121,139278327,139279051,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345 139274161,139276150,139278408,139279129,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330394 Gene ID= ENSG00000280987.4 TPM= 6.18 Transcript Type= protein_coding chr5 139293698 139331365 139293698 139331365 + transcript1964.chr5.nic@MATR3 transcript1964.chr5.nic protein_coding 139293698,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325296,139326163,139329345 139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139331365 Gene ID= ENSG00000015479.18 TPM= 34.59 Transcript Type= NA chr5 139293667 139330444 139293667 139330444 + transcript1982.chr5.nic@MATR3 transcript1982.chr5.nic protein_coding 139293667,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345 139293805,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330444 Gene ID= ENSG00000015479.18 TPM= 29.34 Transcript Type= NA chr5 139293648 139331359 139293648 139331359 + ENST00000394805.7@MATR3 ENST00000394805.7 protein_coding 139293648,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345 139293805,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139331359 Gene ID= ENSG00000015479.18 TPM= 264.59 Transcript Type= protein_coding chr5 139293722 139330405 139293722 139330405 + ENST00000502499.5@MATR3 ENST00000502499.5 protein_coding 139293722,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345 139293805,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330405 Gene ID= ENSG00000015479.18 TPM= 3.96 Transcript Type= protein_coding chr5 139293778 139330441 139293778 139330441 + ENST00000618441.5@MATR3 ENST00000618441.5 protein_coding 139293778,139307239,139314675,139315697,139316076,139317053,139317596,139318908,139319334,139321898,139322463,139322598,139325440,139326163,139329345 139294028,139308327,139314736,139315738,139316188,139317105,139317721,139319033,139319501,139322029,139322506,139322967,139325662,139326284,139330441 Gene ID= ENSG00000015479.18 TPM= 41.98 Transcript Type= protein_coding chr5 139341832 139369698 139341832 139369698 + ENST00000265192.8@PAIP2 ENST00000265192.8 protein_coding 139341832,139363759,139364564,139368733 139341980,139363922,139364743,139369698 Gene ID= ENSG00000120727.12 TPM= 277.1 Transcript Type= protein_coding chr5 139387568 139389914 139387568 139389914 - ENST00000302125.8@MZB1 ENST00000302125.8 protein_coding 139389680,139388461,139388021,139387568 139389914,139388585,139388131,139387921 Gene ID= ENSG00000170476.15 TPM= 1.81 Transcript Type= protein_coding chr5 139396767 139404068 139396767 139404068 - ENST00000450845.6@SPATA24 ENST00000450845.6 protein_coding 139403944,139402628,139401915,139401755,139397041,139396767 139404068,139402693,139402045,139401825,139397143,139396929 Gene ID= ENSG00000170469.10 TPM= 3.62 Transcript Type= protein_coding chr5 139401501 139404067 139401501 139404067 - ENST00000451821.6@SPATA24 ENST00000451821.6 protein_coding 139403944,139402628,139401915,139401501 139404067,139402693,139402045,139401825 Gene ID= ENSG00000170469.10 TPM= 1.81 Transcript Type= protein_coding chr5 139410203 139439526 139410203 139439526 - ENST00000302060.9@DNAJC18 ENST00000302060.9 protein_coding 139439406,139437372,139428538,139426172,139425005,139422708,139420053,139410203 139439526,139437558,139428683,139426357,139425114,139422817,139420225,139414272 Gene ID= ENSG00000170464.9 TPM= 10.87 Transcript Type= protein_coding chr5 139448557 139462746 139448557 139462746 - transcript2012.chr5.nnic@AC142391.1 transcript2012.chr5.nnic protein_coding 139462610,139458139,139457757,139457545,139456474,139455323,139454825,139454602,139449078,139448557 139462746,139458183,139457807,139457604,139456518,139455436,139454923,139454638,139449174,139448770 Gene ID= ENSG00000279686.1 TPM= 3.62 Transcript Type= NA chr5 139448556 139462743 139448556 139462743 - ENST00000618155.2@ECSCR ENST00000618155.2 protein_coding 139462610,139458139,139457757,139457545,139456474,139455323,139454825,139454602,139449078,139448556 139462743,139458183,139457807,139457604,139456518,139455436,139454923,139454638,139449174,139448908 Gene ID= ENSG00000249751.3 TPM= 9.96 Transcript Type= protein_coding chr5 139475964 139482790 139475964 139482790 - ENST00000330794.8@TMEM173 ENST00000330794.8 protein_coding 139482550,139482210,139481478,139481159,139480790,139478270,139477329,139475964 139482790,139482302,139481704,139481342,139480898,139478508,139477515,139476454 Gene ID= ENSG00000184584.12 TPM= 2.72 Transcript Type= protein_coding chr5 139475530 139482345 139475530 139482345 - transcript2018.chr5.nic@TMEM173 transcript2018.chr5.nic protein_coding 139482210,139481478,139481159,139480790,139478270,139477329,139475530 139482345,139481704,139481342,139480898,139478508,139477515,139476454 Gene ID= ENSG00000184584.12 TPM= 10.26 Transcript Type= NA chr5 139475530 139482691 139475530 139482691 - transcript2019.chr5.nic@TMEM173 transcript2019.chr5.nic protein_coding 139482550,139482210,139481159,139480790,139478270,139477329,139475530 139482691,139482302,139481342,139480898,139478508,139477515,139476454 Gene ID= ENSG00000184584.12 TPM= 3.02 Transcript Type= NA chr5 139475530 139482762 139475530 139482762 - transcript2020.chr5.nic@TMEM173 transcript2020.chr5.nic protein_coding 139482550,139482210,139481159,139480790,139478270,139477329,139475530 139482762,139482302,139481704,139480898,139478508,139477515,139476454 Gene ID= ENSG00000184584.12 TPM= 3.92 Transcript Type= NA chr5 139475530 139482762 139475530 139482762 - transcript2021.chr5.nic@TMEM173 transcript2021.chr5.nic protein_coding 139482550,139482210,139481478,139481159,139480790,139478270,139475530 139482762,139482302,139481704,139481342,139480898,139478508,139476454 Gene ID= ENSG00000184584.12 TPM= 9.51 Transcript Type= NA chr5 139475530 139482345 139475530 139482345 - transcript2024.chr5.nic@TMEM173 transcript2024.chr5.nic protein_coding 139482210,139481478,139481159,139480790,139478270,139475530 139482345,139481704,139481342,139480898,139478508,139476454 Gene ID= ENSG00000184584.12 TPM= 2.26 Transcript Type= NA chr5 139561227 139627690 139561227 139627690 + transcript2027.chr5.nic@UBE2D2 transcript2027.chr5.nic protein_coding 139561227,139562244,139600372,139614586,139614697,139614861,139623368,139626756 139561815,139562407,139600435,139614617,139614774,139614966,139623461,139627690 Gene ID= ENSG00000131508.15 TPM= 9.96 Transcript Type= NA chr5 139648316 139683884 139648316 139683884 + transcript2038.chr5.nic@CXXC5 transcript2038.chr5.nic protein_coding 139648316,139679847,139680364,139682863 139648845,139679940,139681447,139683884 Gene ID= ENSG00000171604.11 TPM= 4.53 Transcript Type= NA chr5 139648292 139683882 139648292 139683882 + ENST00000302517.7@CXXC5 ENST00000302517.7 protein_coding 139648292,139680364,139682863 139648845,139681447,139683882 Gene ID= ENSG00000171604.11 TPM= 125.87 Transcript Type= protein_coding chr5 139847675 140043294 139847675 140043294 - ENST00000361474.5@NRG2 ENST00000361474.5 protein_coding 140042370,139887340,139880856,139871721,139865549,139855676,139852904,139852432,139851604,139847675 140043294,139887511,139880974,139871841,139865625,139855778,139853027,139852559,139851831,139848697 Gene ID= ENSG00000158458.19 TPM= 14.49 Transcript Type= protein_coding chr5 140103004 140107749 140103004 140107749 - transcript2053.chr5.nnic@LINC01024 transcript2053.chr5.nnic antisense_RNA 140107099,140106296,140105587,140103004 140107749,140106490,140105762,140104166 Gene ID= ENSG00000245146.6 TPM= 1.81 Transcript Type= NA chr5 140175156 140244810 140175156 140244810 + ENST00000509589.5@CYSTM1 ENST00000509589.5 protein_coding 140175156,140194446,140243305,140244642 140175285,140194652,140243463,140244810 Gene ID= ENSG00000120306.9 TPM= 2.72 Transcript Type= processed_transcript chr5 140245039 140303121 140245039 140303121 - ENST00000261813.8@PFDN1 ENST00000261813.8 protein_coding 140303041,140300416,140281449,140245039 140303121,140300582,140281533,140246057 Gene ID= ENSG00000113068.9 TPM= 58.86 Transcript Type= protein_coding chr5 140245125 140303113 140245125 140303113 - ENST00000510217.1@PFDN1 ENST00000510217.1 protein_coding 140303041,140281449,140245125 140303113,140281533,140246057 Gene ID= ENSG00000113068.9 TPM= 4.53 Transcript Type= protein_coding chr5 140332843 140346631 140332843 140346631 - ENST00000230990.6@HBEGF ENST00000230990.6 protein_coding 140346283,140345911,140342635,140335872,140334658,140332843 140346631,140346084,140342812,140336027,140334748,140334280 Gene ID= ENSG00000113070.7 TPM= 4.53 Transcript Type= protein_coding chr5 140401801 140539850 140401801 140539850 + transcript2073.chr5.nic@ANKHD1 transcript2073.chr5.nic protein_coding 140401801,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140482580,140485121,140485589,140486958,140496520,140504821,140505122,140505724,140506835,140507785,140509637,140510019,140512828,140513363,140524066,140525996,140526928,140527873,140528184,140535362,140537338,140538086,140538919,140539359 140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140482667,140485248,140485732,140487060,140497278,140504966,140505233,140505869,140506977,140507998,140509812,140510181,140512923,140513479,140524240,140526443,140527074,140528022,140529796,140535538,140537589,140538261,140539083,140539850 Gene ID= ENSG00000131503.20 TPM= 21.28 Transcript Type= NA chr5 140401854 140472477 140401854 140472477 + ENST00000394723.7@ANKHD1 ENST00000394723.7 protein_coding 140401854,140436104,140438461,140440119,140440995,140445742,140449211,140458625,140459164,140464667,140472239 140402273,140436257,140438617,140440266,140441142,140445975,140449305,140458862,140459355,140464776,140472477 Gene ID= ENSG00000131503.20 TPM= 7.7 Transcript Type= protein_coding chr5 140547663 140549574 140547663 140549574 + transcript2078.chr5.nnic@ANKHD1-EIF4EBP3 transcript2078.chr5.nnic protein_coding 140547663,140548906,140549234 140547886,140549076,140549574 Gene ID= ENSG00000254996.5 TPM= 1.81 Transcript Type= NA chr5 140547666 140549578 140547666 140549578 + ENST00000310331.2@EIF4EBP3 ENST00000310331.2 protein_coding 140547666,140548906,140549234 140547840,140549076,140549578 Gene ID= ENSG00000243056.1 TPM= 30.79 Transcript Type= protein_coding chr5 140550068 140557456 140550068 140557456 - ENST00000602775.5@SRA1 ENST00000602775.5 protein_coding 140557147,140551982,140551061,140550068 140557456,140552184,140551169,140550911 Gene ID= ENSG00000213523.10 TPM= 26.26 Transcript Type= retained_intron chr5 140558272 140564689 140558272 140564689 - ENST00000357560.8@APBB3 ENST00000357560.8 protein_coding 140564197,140563752,140563594,140562663,140562353,140562100,140561844,140561587,140561365,140561018,140560639,140560313,140558272 140564689,140563915,140563670,140562723,140562499,140562227,140561849,140561701,140561449,140561101,140560754,140560504,140558821 Gene ID= ENSG00000113108.19 TPM= 9.06 Transcript Type= protein_coding chr5 140564456 140569103 140564456 140569103 + ENST00000323146.7@SLC35A4 ENST00000323146.7 protein_coding 140564456,140565873,140566565 140564858,140565971,140569103 Gene ID= ENSG00000176087.14 TPM= 220.95 Transcript Type= protein_coding chr5 140631728 140633701 140631728 140633701 - ENST00000302014.10@CD14 ENST00000302014.10 protein_coding 140633069,140631728 140633701,140632980 Gene ID= ENSG00000170458.13 TPM= 441.91 Transcript Type= protein_coding chr5 140645285 140647785 140645285 140647785 - ENST00000252102.8@NDUFA2 ENST00000252102.8 protein_coding 140647483,140647256,140645285 140647785,140647362,140645678 Gene ID= ENSG00000131495.8 TPM= 112.74 Transcript Type= protein_coding chr5 140645369 140647645 140645369 140647645 - ENST00000512088.1@NDUFA2 ENST00000512088.1 protein_coding 140647483,140647256,140645369 140647645,140647362,140645725 Gene ID= ENSG00000131495.8 TPM= 7.7 Transcript Type= protein_coding chr5 140639413 140645402 140639413 140645402 + transcript2099.chr5.nic@TMCO6 transcript2099.chr5.nic protein_coding 140639413,140639739,140641665,140641870,140642315,140642586,140642925,140643564,140643780,140644100,140644573 140639612,140639851,140641780,140642053,140642419,140642671,140643041,140643675,140643966,140644194,140645402 Gene ID= ENSG00000113119.12 TPM= 2.72 Transcript Type= NA chr5 140639427 140645402 140639427 140645402 + ENST00000394671.7@TMCO6 ENST00000394671.7 protein_coding 140639427,140639739,140641665,140641870,140642315,140642586,140642925,140643564,140643780,140644100,140644573,140644985 140639612,140639851,140641780,140642053,140642419,140642671,140643041,140643675,140643966,140644194,140644740,140645402 Gene ID= ENSG00000113119.12 TPM= 24.45 Transcript Type= protein_coding chr5 140639504 140645408 140639504 140645408 + ENST00000252100.6@TMCO6 ENST00000252100.6 protein_coding 140639504,140639739,140641665,140641870,140642315,140642586,140642907,140643564,140643780,140644100,140644573,140644985 140639612,140639851,140641780,140642053,140642419,140642671,140643041,140643675,140643966,140644194,140644740,140645408 Gene ID= ENSG00000113119.12 TPM= 1.81 Transcript Type= protein_coding chr5 140647770 140662478 140647770 140662478 + ENST00000417647.6@IK ENST00000417647.6 protein_coding 140647770,140648471,140651714,140652088,140652977,140653938,140654516,140654681,140655829,140657554,140658737,140658939,140659315,140659756,140660115,140660758,140661620,140661899,140662179,140662302 140647924,140648537,140651806,140652147,140653144,140654052,140654586,140654727,140655992,140657662,140658776,140659164,140659333,140659834,140660195,140660815,140661708,140662007,140662213,140662478 Gene ID= ENSG00000113141.17 TPM= 139.45 Transcript Type= protein_coding chr5 140664855 140674136 140664855 140674136 + transcript2115.chr5.nic@WDR55 transcript2115.chr5.nic protein_coding 140664855,140668234,140668415,140668612,140668891,140669079,140669333,140671269 140665103,140668334,140668502,140668791,140668990,140669248,140669690,140674136 Gene ID= ENSG00000120314.18 TPM= 9.06 Transcript Type= NA chr5 140664853 140672344 140664853 140672344 + transcript2118.chr5.nic@WDR55 transcript2118.chr5.nic protein_coding 140664853,140668234,140668415,140668612,140668891,140669333 140665103,140668334,140668502,140668791,140669248,140672344 Gene ID= ENSG00000120314.18 TPM= 3.17 Transcript Type= NA chr5 140664859 140672344 140664859 140672344 + transcript2119.chr5.nic@WDR55 transcript2119.chr5.nic protein_coding 140664859,140668234,140668612,140668891,140669079,140669333 140665103,140668502,140668791,140668990,140669248,140672344 Gene ID= ENSG00000120314.18 TPM= 4.07 Transcript Type= NA chr5 140673173 140692024 140673173 140692024 - ENST00000504156.5@HARS ENST00000504156.5 protein_coding 140691215,140690855,140683100,140679788,140679002,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673173 140692024,140690944,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328 Gene ID= ENSG00000170445.12 TPM= 75.61 Transcript Type= protein_coding chr5 140673904 140691377 140673904 140691377 - ENST00000457527.6@HARS ENST00000457527.6 protein_coding 140691215,140690855,140683100,140679788,140679062,140677908,140677655,140677327,140676989,140676654,140675017,140674679,140673904 140691377,140690944,140683219,140679883,140679127,140678015,140677753,140677420,140677116,140676896,140675133,140674825,140674328 Gene ID= ENSG00000170445.12 TPM= 3.17 Transcript Type= protein_coding chr5 140691437 140700254 140691437 140700254 + transcript2126.chr5.nic@HARS2 transcript2126.chr5.nic protein_coding 140691437,140691607,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493 140691515,140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140700254 Gene ID= ENSG00000112855.14 TPM= 9.06 Transcript Type= NA chr5 140691426 140699291 140691426 140699291 + ENST00000230771.7@HARS2 ENST00000230771.7 protein_coding 140691426,140693591,140693935,140694185,140695508,140695738,140696103,140696521,140696943,140697164,140697569,140697932,140698493 140691756,140693665,140694054,140694280,140695633,140695845,140696201,140696614,140697070,140697406,140697685,140698078,140699291 Gene ID= ENSG00000112855.14 TPM= 66.1 Transcript Type= protein_coding chr5 140700334 140706676 140700334 140706676 + ENST00000274712.7@ZMAT2 ENST00000274712.7 protein_coding 140700334,140700819,140702006,140703918,140704426,140705613 140700478,140700912,140702129,140703991,140704571,140706676 Gene ID= ENSG00000146007.10 TPM= 32.6 Transcript Type= protein_coding chr5 141343868 141512979 141343868 141512979 + ENST00000253812.7@PCDHGA3 ENST00000253812.7 protein_coding 141343868,141494807,141505393,141510947 141346457,141494865,141505481,141512979 Gene ID= ENSG00000254245.2 TPM= 1.92 Transcript Type= protein_coding chr5 141360136 141512979 141360136 141512979 + ENST00000522605.1@PCDHGB2 ENST00000522605.1 protein_coding 141360136,141494807,141505393,141510947 141362556,141494865,141505481,141512979 Gene ID= ENSG00000253910.2 TPM= 1.01 Transcript Type= protein_coding chr5 141370264 141512979 141370264 141512979 + ENST00000576222.1@PCDHGB3 ENST00000576222.1 protein_coding 141370264,141494807,141505393,141510947 141372809,141494865,141505481,141512979 Gene ID= ENSG00000262209.2 TPM= 1.01 Transcript Type= protein_coding chr5 141373914 141512979 141373914 141512979 + ENST00000517434.2@PCDHGA6 ENST00000517434.2 protein_coding 141373914,141494807,141505393,141510947 141376507,141494865,141505481,141512979 Gene ID= ENSG00000253731.2 TPM= 1.01 Transcript Type= protein_coding chr5 141417691 141512979 141417691 141512979 + ENST00000398594.3@PCDHGB7 ENST00000398594.3 protein_coding 141417691,141494807,141505393,141510947 141420274,141494865,141505481,141512979 Gene ID= ENSG00000254122.2 TPM= 10.07 Transcript Type= protein_coding chr5 141430618 141512979 141430618 141512979 + ENST00000252085.3@PCDHGA12 ENST00000252085.3 protein_coding 141430618,141494807,141505393,141510947 141433183,141494865,141505481,141512979 Gene ID= ENSG00000253159.2 TPM= 12.79 Transcript Type= protein_coding chr5 141475980 141512977 141475980 141512977 + ENST00000617641.4@PCDHGC3 ENST00000617641.4 protein_coding 141475980,141494807,141505393,141510947 141476146,141494865,141505481,141512977 Gene ID= ENSG00000240184.6 TPM= 36.33 Transcript Type= protein_coding chr5 141476003 141512979 141476003 141512979 + ENST00000308177.4@PCDHGC3 ENST00000308177.4 protein_coding 141476003,141494807,141505393,141510947 141478546,141494865,141505481,141512979 Gene ID= ENSG00000240184.6 TPM= 29.99 Transcript Type= protein_coding chr5 141515014 141619107 141515014 141619107 - transcript2153.chr5.nic@DIAPH1 transcript2153.chr5.nic protein_coding 141618798,141588224,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141550499,141534335,141529603,141529172,141528702,141528453,141527573,141526297,141526038,141524143,141515014 141619107,141588250,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141550507,141534433,141529697,141529273,141528941,141528582,141527697,141526461,141526173,141524229,141517008 Gene ID= ENSG00000131504.15 TPM= 26.03 Transcript Type= NA chr5 141515014 141619127 141515014 141619127 - transcript2155.chr5.nnic@DIAPH1 transcript2155.chr5.nnic protein_coding 141618798,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141534335,141529603,141529172,141528702,141528453,141527573,141526297,141526038,141524143,141515014 141619127,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141534433,141529697,141529273,141528941,141528582,141527697,141526461,141526173,141524229,141517008 Gene ID= ENSG00000131504.15 TPM= 13.36 Transcript Type= NA chr5 141515014 141529157 141515014 141529157 - transcript2157.chr5.nic@DIAPH1 transcript2157.chr5.nic protein_coding 141528702,141528453,141527573,141526297,141526038,141524143,141515014 141529157,141528582,141527697,141526461,141526173,141524229,141517008 Gene ID= ENSG00000131504.15 TPM= 12.45 Transcript Type= NA chr5 141515022 141619055 141515022 141619055 - ENST00000389057.9@DIAPH1 ENST00000389057.9 protein_coding 141618798,141587042,141584124,141583485,141583206,141582312,141580744,141579088,141578515,141578225,141577475,141576756,141576230,141574967,141573492,141571926,141534335,141529603,141529172,141528702,141528453,141527573,141526297,141526038,141524143,141515022 141619055,141587197,141584225,141583615,141583292,141582375,141580883,141579196,141578625,141578343,141577591,141576871,141576294,141575146,141574208,141572040,141534442,141529697,141529273,141528941,141528582,141527697,141526461,141526173,141524229,141517008 Gene ID= ENSG00000131504.15 TPM= 11.55 Transcript Type= protein_coding chr5 141620876 141636872 141620876 141636872 - transcript2161.chr5.nnic@HDAC3 transcript2161.chr5.nnic protein_coding 141636736,141636548,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876 141636872,141636630,141634953,141630125,141629916,141629739,141629306,141628639,141628212,141627957,141626283,141626071,141625764,141625365,141621537 Gene ID= ENSG00000171720.9 TPM= 8 Transcript Type= NA chr5 141620876 141636872 141620876 141636872 - transcript2162.chr5.nic@HDAC3 transcript2162.chr5.nic protein_coding 141636736,141636548,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876 141636872,141636630,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537 Gene ID= ENSG00000171720.9 TPM= 7.54 Transcript Type= NA chr5 141620876 141636870 141620876 141636870 - ENST00000305264.7@HDAC3 ENST00000305264.7 protein_coding 141636736,141636548,141634811,141630044,141629860,141629684,141629173,141628559,141628114,141627893,141626194,141626013,141625685,141625208,141620876 141636870,141636630,141634953,141630125,141629916,141629739,141629306,141628639,141628187,141627957,141626283,141626071,141625764,141625365,141621537 Gene ID= ENSG00000171720.9 TPM= 188.65 Transcript Type= protein_coding chr5 141637001 141641076 141637001 141641076 + transcript2187.chr5.nnic@RELL2 transcript2187.chr5.nnic protein_coding 141637001,141638170,141638795,141638955,141639464,141639920,141640412,141640671 141637757,141638409,141638860,141639021,141639649,141640295,141640445,141641076 Gene ID= ENSG00000164620.8 TPM= 3.8 Transcript Type= NA chr5 141636990 141641076 141636990 141641076 + transcript2193.chr5.nic@RELL2 transcript2193.chr5.nic protein_coding 141636990,141638955,141639464,141639920,141640412,141640671 141638860,141639021,141639649,141640295,141640445,141641076 Gene ID= ENSG00000164620.8 TPM= 1.99 Transcript Type= NA chr5 141636950 141641063 141636950 141641063 + ENST00000444782.5@RELL2 ENST00000444782.5 protein_coding 141636950,141638170,141638795,141638955,141639464,141639920,141640412,141640671 141637741,141638409,141638860,141639021,141639649,141640295,141640445,141641063 Gene ID= ENSG00000164620.8 TPM= 11.05 Transcript Type= protein_coding chr5 141637005 141641064 141637005 141641064 + ENST00000518025.5@RELL2 ENST00000518025.5 protein_coding 141637005,141638795,141639464,141639920,141640412,141640671 141638409,141638860,141639649,141640295,141640445,141641064 Gene ID= ENSG00000164620.8 TPM= 5.61 Transcript Type= processed_transcript chr5 141637026 141641077 141637026 141641077 + ENST00000297164.7@RELL2 ENST00000297164.7 protein_coding 141637026,141638795,141638955,141639464,141639920,141640412,141640671 141638409,141638860,141639021,141639649,141640295,141640445,141641077 Gene ID= ENSG00000164620.8 TPM= 11.05 Transcript Type= protein_coding chr5 141639303 141651427 141639303 141651427 - transcript2180.chr5.nic@FCHSD1 transcript2180.chr5.nic protein_coding 141651348,141651020,141650359,141649887,141649395,141649172,141648957,141647968,141647398,141647135,141646603,141646087,141645771,141645020,141644859,141644573,141644218,141643001,141641702,141639303 141651427,141651117,141650404,141649954,141649530,141649308,141649020,141648096,141647520,141647230,141646722,141646191,141645932,141645148,141644942,141644690,141644438,141643088,141641757,141641563 Gene ID= ENSG00000197948.10 TPM= 16 Transcript Type= NA chr5 141639303 141651427 141639303 141651427 - transcript2185.chr5.nic@FCHSD1 transcript2185.chr5.nic protein_coding 141651348,141651020,141650359,141649887,141649395,141649172,141648957,141647968,141647398,141647135,141646603,141646087,141645771,141645020,141644859,141644573,141644218,141641702,141639303 141651427,141651117,141650404,141649954,141649530,141649308,141649020,141648096,141647520,141647230,141646722,141646191,141645932,141645148,141644942,141644690,141644438,141643088,141641563 Gene ID= ENSG00000197948.10 TPM= 2.42 Transcript Type= NA chr5 141639302 141651419 141639302 141651419 - ENST00000435817.6@FCHSD1 ENST00000435817.6 protein_coding 141651348,141651020,141650359,141649887,141649395,141649172,141648957,141647968,141647398,141647135,141646603,141646087,141645771,141645020,141644859,141644573,141644218,141643001,141641702,141639302 141651419,141651117,141650404,141649954,141649536,141649308,141649020,141648096,141647520,141647230,141646722,141646191,141645932,141645148,141644942,141644690,141644438,141643088,141641757,141641563 Gene ID= ENSG00000197948.10 TPM= 17.81 Transcript Type= protein_coding chr5 141653401 141682221 141653401 141682221 - ENST00000239440.8@ARAP3 ENST00000239440.8 protein_coding 141682173,141679963,141679761,141679545,141673605,141673401,141673013,141672741,141672552,141672102,141671895,141671570,141671265,141670512,141669922,141669709,141666424,141665311,141664922,141662043,141661684,141659779,141659408,141658579,141658365,141656718,141656504,141656194,141656064,141655869,141655621,141655362,141653401 141682221,141680503,141679822,141679656,141673808,141673470,141673133,141672925,141672658,141672301,141671980,141671752,141671400,141670628,141670063,141669811,141666643,141665374,141665085,141662255,141661789,141659926,141659476,141658653,141658479,141656846,141656637,141656276,141656099,141655932,141655758,141655400,141654435 Gene ID= ENSG00000120318.15 TPM= 5.43 Transcript Type= protein_coding chr5 141862652 141878410 141862652 141878410 - ENST00000394536.4@PCDH1 ENST00000394536.4 protein_coding 141878223,141868569,141862652 141878410,141869431,141865427 Gene ID= ENSG00000156453.13 TPM= 11.77 Transcript Type= protein_coding chr5 141923794 141940152 141923794 141940152 + transcript2202.chr5.nnic@KIAA0141 transcript2202.chr5.nnic protein_coding 141923794,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141938852,141939506 141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141938904,141940152 Gene ID= ENSG00000081791.8 TPM= 9.96 Transcript Type= NA chr5 141923794 141940154 141923794 141940154 + transcript2203.chr5.nnic@KIAA0141 transcript2203.chr5.nnic protein_coding 141923794,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141938852,141939554 141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141938904,141940154 Gene ID= ENSG00000081791.8 TPM= 9.96 Transcript Type= NA chr5 141923794 141942045 141923794 141942045 + transcript2207.chr5.nnic@KIAA0141 transcript2207.chr5.nnic protein_coding 141923794,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939506 141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141942045 Gene ID= ENSG00000081791.8 TPM= 13.58 Transcript Type= NA chr5 141923808 141942047 141923808 141942047 + ENST00000432126.6@KIAA0141 ENST00000432126.6 protein_coding 141923808,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521 141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141942047 Gene ID= ENSG00000081791.8 TPM= 68.82 Transcript Type= protein_coding chr5 141923794 141934178 141923794 141934178 + transcript2217.chr5.nic@KIAA0141 transcript2217.chr5.nic protein_coding 141923794,141924581,141925410,141928151,141929582,141929989,141930178,141933259 141923972,141924695,141925527,141928298,141929740,141930074,141930274,141934178 Gene ID= ENSG00000081791.8 TPM= 8.15 Transcript Type= NA chr5 141923855 141940120 141923855 141940120 + ENST00000194118.8@KIAA0141 ENST00000194118.8 protein_coding 141923855,141924581,141925410,141928151,141929582,141929989,141930178,141933259,141934240,141934494,141937198,141938521,141939554 141923972,141924695,141925527,141928298,141929740,141930074,141930274,141933401,141934398,141934586,141937357,141938760,141940120 Gene ID= ENSG00000081791.8 TPM= 8.15 Transcript Type= protein_coding chr5 141943585 141959062 141943585 141959062 - ENST00000231484.3@PCDH12 ENST00000231484.3 protein_coding 141954972,141951493,141949432,141943585 141959062,141951590,141949583,141945805 Gene ID= ENSG00000113555.5 TPM= 44.37 Transcript Type= protein_coding chr5 141969039 141990291 141969039 141990291 + ENST00000394520.6@RNF14 ENST00000394520.6 protein_coding 141969039,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733 141969167,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141990291 Gene ID= ENSG00000013561.17 TPM= 54.06 Transcript Type= protein_coding chr5 141969161 141989187 141969161 141989187 + transcript2226.chr5.nic@RNF14 transcript2226.chr5.nic protein_coding 141969161,141970704,141973583,141974804,141978303,141980123,141983380,141984803,141987733 141969234,141970877,141973742,141974955,141978830,141980351,141983552,141984933,141989187 Gene ID= ENSG00000013561.17 TPM= 5.16 Transcript Type= NA chr5 141969039 141989187 141969039 141989187 + transcript2229.chr5.nnic@RNF14 transcript2229.chr5.nnic protein_coding 141969039,141970704,141973583,141974804,141980123,141983380,141984803,141987733 141969167,141970877,141973742,141974955,141980351,141983552,141984933,141989187 Gene ID= ENSG00000013561.17 TPM= 8.33 Transcript Type= NA chr5 141968886 141990290 141968886 141990290 + ENST00000347642.7@RNF14 ENST00000347642.7 protein_coding 141968886,141973583,141974804,141978303,141980123,141983380,141984803,141987733 141969167,141973742,141974955,141978830,141980351,141983552,141984933,141990290 Gene ID= ENSG00000013561.17 TPM= 4.71 Transcript Type= protein_coding chr5 141969161 141989185 141969161 141989185 + transcript2232.chr5.nic@RNF14 transcript2232.chr5.nic protein_coding 141969161,141970704,141973583,141978303,141980123,141983380,141984803,141987733 141969234,141970877,141973742,141978830,141980351,141983552,141984933,141989185 Gene ID= ENSG00000013561.17 TPM= 2.9 Transcript Type= NA chr5 141969039 141989187 141969039 141989187 + transcript2236.chr5.nic@RNF14 transcript2236.chr5.nic protein_coding 141969039,141970704,141973583,141983380,141984803,141987733 141969167,141970877,141973742,141983552,141984933,141989187 Gene ID= ENSG00000013561.17 TPM= 2.9 Transcript Type= NA chr5 141969111 141989185 141969111 141989185 + ENST00000394514.6@RNF14 ENST00000394514.6 protein_coding 141969111,141970704,141973583,141978303,141980123,141983380,141984803,141987733 141969167,141970877,141973742,141978830,141980351,141983552,141984933,141989185 Gene ID= ENSG00000013561.17 TPM= 11.05 Transcript Type= protein_coding chr5 141999442 142013008 141999442 142013008 - transcript2240.chr5.nnic@GNPDA1 transcript2240.chr5.nnic protein_coding 142012669,142011912,142007799,142006144,142004932,142003088,141999442 142013008,142012041,142007900,142006326,142005116,142003262,142002129 Gene ID= ENSG00000113552.15 TPM= 9.96 Transcript Type= NA chr5 142000669 142013031 142000669 142013031 - ENST00000311337.10@GNPDA1 ENST00000311337.10 protein_coding 142012995,142011912,142007799,142006144,142004932,142003088,142000669 142013031,142012041,142007900,142006326,142005116,142003262,142002129 Gene ID= ENSG00000113552.15 TPM= 94.18 Transcript Type= protein_coding chr5 142000674 142013030 142000674 142013030 - ENST00000500692.6@GNPDA1 ENST00000500692.6 protein_coding 142012995,142012288,142011912,142007799,142006144,142004932,142003088,142000674 142013030,142012339,142012041,142007900,142006326,142005116,142003262,142002129 Gene ID= ENSG00000113552.15 TPM= 25.36 Transcript Type= protein_coding chr5 142108505 142154443 142108505 142154443 + ENST00000253814.5@NDFIP1 ENST00000253814.5 protein_coding 142108505,142131808,142132212,142135730,142137734,142140563,142144571,142151731 142109037,142131895,142132342,142135817,142137858,142140629,142144676,142154443 Gene ID= ENSG00000131507.10 TPM= 253.55 Transcript Type= protein_coding chr5 142108760 142152781 142108760 142152781 + transcript2250.chr5.nnic@NDFIP1 transcript2250.chr5.nnic protein_coding 142108760,142131808,142132212,142135730,142137734,142140563,142151731 142109037,142131895,142132342,142135817,142137858,142140629,142152781 Gene ID= ENSG00000131507.10 TPM= 5.43 Transcript Type= NA chr5 144158159 144170659 144158159 144170659 - ENST00000274496.9@YIPF5 ENST00000274496.9 protein_coding 144170535,144169846,144165432,144164111,144162218,144158159 144170659,144169965,144165604,144164256,144162399,144160559 Gene ID= ENSG00000145817.16 TPM= 76.07 Transcript Type= protein_coding chr5 145760247 145835379 145760247 145835379 - transcript2263.chr5.nnic@PRELID2 transcript2263.chr5.nnic protein_coding 145835177,145823077,145819945,145817894,145764931,145760247 145835379,145823134,145820018,145818054,145765000,145760525 Gene ID= ENSG00000186314.11 TPM= 1.81 Transcript Type= NA chr5 146113028 146182670 146113028 146182670 - transcript2270.chr5.nnic@LARS transcript2270.chr5.nnic protein_coding 146182622,146177547,146172687,146171910,146168128,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149622,146144624,146144472,146144267,146143412,146142872,146140204,146135601,146132898,146131019,146130018,146128978,146128672,146126435,146123982,146122492,146120371,146113028 146182670,146177665,146172774,146171990,146168265,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699,146144709,146144537,146144349,146143550,146143084,146140261,146135664,146133081,146131109,146130158,146129118,146128782,146126545,146124086,146122587,146120503,146114311 Gene ID= ENSG00000133706.17 TPM= 3.62 Transcript Type= NA chr5 146113028 146182670 146113028 146182670 - transcript2272.chr5.nic@LARS transcript2272.chr5.nic protein_coding 146182488,146177547,146172687,146171910,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149622,146144624,146144472,146144267,146143412,146142872,146140204,146135601,146132898,146131019,146130018,146128978,146128672,146126435,146123982,146122492,146120371,146113028 146182670,146177665,146172774,146171990,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699,146144709,146144537,146144349,146143550,146143084,146140261,146135664,146133081,146131109,146130158,146129118,146128782,146126545,146124086,146122587,146120503,146114311 Gene ID= ENSG00000133706.17 TPM= 2.72 Transcript Type= NA chr5 146113038 146182660 146113038 146182660 - ENST00000394434.6@LARS ENST00000394434.6 protein_coding 146182488,146177547,146172687,146171910,146168128,146164310,146160374,146159407,146157728,146157403,146153893,146153734,146153174,146151862,146149622,146144624,146144472,146144267,146143412,146142872,146140204,146135601,146132898,146131019,146130018,146128978,146128672,146126435,146123982,146122492,146120371,146113038 146182660,146177665,146172774,146171990,146168265,146164471,146160486,146159470,146157795,146157628,146153980,146153810,146153227,146152002,146149699,146144709,146144537,146144349,146143550,146143084,146140261,146135664,146133081,146131109,146130158,146129118,146128782,146126545,146124086,146122587,146120503,146114311 Gene ID= ENSG00000133706.17 TPM= 89.65 Transcript Type= protein_coding chr5 146203600 146289132 146203600 146289132 + ENST00000265271.6@RBM27 ENST00000265271.6 protein_coding 146203600,146218985,146223403,146228946,146229717,146230657,146233450,146237298,146251711,146254943,146258449,146260745,146261510,146263491,146267649,146269207,146269420,146270954,146271483,146284622,146285947 146203824,146219103,146223527,146229037,146229910,146230917,146233743,146237432,146251875,146255092,146258593,146260898,146261806,146263631,146267768,146269281,146269584,146271058,146271674,146284732,146289132 Gene ID= ENSG00000091009.7 TPM= 2.72 Transcript Type= protein_coding chr5 146447312 146511961 146447312 146511961 + ENST00000296702.9@TCERG1 ENST00000296702.9 protein_coding 146447312,146455056,146457183,146458884,146463551,146468341,146469544,146470636,146471488,146478493,146479855,146480028,146482592,146483540,146492920,146498536,146503375,146503824,146507028,146507873,146509145,146510441 146447408,146455281,146457335,146459337,146463793,146468403,146469744,146470748,146471576,146478653,146479911,146480094,146482727,146483629,146493038,146498686,146503539,146504006,146507207,146507956,146509245,146511961 Gene ID= ENSG00000113649.11 TPM= 4.53 Transcript Type= protein_coding chr5 146447311 146511507 146447311 146511507 + transcript2279.chr5.nic@TCERG1 transcript2279.chr5.nic protein_coding 146447311,146455056,146457183,146458884,146463551,146469544,146470636,146471488,146478493,146479855,146480028,146482592,146483540,146492920,146498536,146503375,146503824,146507028,146507873,146509145,146510067,146510441 146447408,146455281,146457335,146459337,146463793,146469744,146470748,146471576,146478653,146479911,146480094,146482727,146483629,146493038,146498686,146503539,146504006,146507207,146507956,146509245,146510160,146511507 Gene ID= ENSG00000113649.11 TPM= 4.53 Transcript Type= NA chr5 146589504 146878894 146589504 146878894 - ENST00000530902.5@PPP2R2B ENST00000530902.5 protein_coding 146878701,146878002,146701045,146697979,146691128,146650547,146638251,146600291,146592971,146589504 146878894,146878195,146701142,146698144,146691240,146650724,146638415,146600460,146593062,146590226 Gene ID= ENSG00000156475.18 TPM= 3.62 Transcript Type= processed_transcript chr5 147234963 147387852 147234963 147387852 + ENST00000397936.7@STK32A ENST00000397936.7 protein_coding 147234963,147239539,147278124,147279247,147323898,147343006,147351065,147361517,147370654,147373169,147375090,147383441,147383890 147235199,147239686,147278179,147279398,147324071,147343043,147351154,147361614,147370770,147373294,147375218,147383505,147387852 Gene ID= ENSG00000169302.14 TPM= 4.53 Transcript Type= protein_coding chr5 147390811 147453959 147390811 147453959 - ENST00000398514.7@DPYSL3 ENST00000398514.7 protein_coding 147453549,147424875,147418447,147415709,147413596,147412608,147408728,147405610,147401540,147400692,147399082,147397666,147395559,147390811 147453959,147424963,147418631,147415873,147413657,147412688,147408796,147405730,147401696,147400833,147399252,147397845,147395721,147394123 Gene ID= ENSG00000113657.12 TPM= 1.81 Transcript Type= protein_coding chr5 148268180 148286254 148268180 148286254 + ENST00000512953.5@SPINK13 ENST00000512953.5 protein_coding 148268180,148268719,148270040,148274347,148282104,148286000 148268507,148268888,148270142,148274384,148282231,148286254 Gene ID= ENSG00000214510.9 TPM= 1.81 Transcript Type= protein_coding chr5 148383935 148442836 148383935 148442836 + ENST00000340253.9@FBXO38 ENST00000340253.9 protein_coding 148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148427213,148433424,148433635,148438332,148439647,148440424,148441124,148441969 148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148427947,148433524,148433737,148438498,148439792,148440527,148441237,148442836 Gene ID= ENSG00000145868.16 TPM= 8.15 Transcript Type= protein_coding chr5 148383935 148442827 148383935 148442827 + ENST00000296701.10@FBXO38 ENST00000296701.10 protein_coding 148383935,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148433424,148433635,148438332,148439647,148440424,148441124,148441969 148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148433524,148433737,148438498,148439792,148440527,148441237,148442827 Gene ID= ENSG00000145868.16 TPM= 12.68 Transcript Type= protein_coding chr5 148384002 148442836 148384002 148442836 + ENST00000394370.7@FBXO38 ENST00000394370.7 protein_coding 148384002,148394714,148398999,148401982,148402348,148404685,148406257,148409124,148410635,148414136,148415928,148416994,148423998,148425522,148427213,148433424,148433635,148438332,148439647,148440424,148441124,148441969 148384039,148394904,148399132,148402145,148402513,148404822,148406394,148409217,148410765,148414306,148416070,148417204,148424117,148425701,148427722,148433524,148433737,148438498,148439792,148440527,148441237,148442836 Gene ID= ENSG00000145868.16 TPM= 9.96 Transcript Type= protein_coding chr5 149141483 149260542 149141483 149260542 + ENST00000326685.11@ABLIM3 ENST00000326685.11 protein_coding 149141483,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291 149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260542 Gene ID= ENSG00000173210.19 TPM= 17.96 Transcript Type= protein_coding chr5 149141493 149260436 149141493 149260436 + transcript2304.chr5.nic@ABLIM3 transcript2304.chr5.nic protein_coding 149141493,149142009,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291 149141654,149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260436 Gene ID= ENSG00000173210.19 TPM= 6.64 Transcript Type= NA chr5 149141493 149260436 149141493 149260436 + transcript2305.chr5.nic@ABLIM3 transcript2305.chr5.nic protein_coding 149141493,149183452,149198219,149200316,149207008,149210726,149216959,149230649,149233229,149239759,149242491,149244881,149246482,149247782,149249815,149250447,149251359,149252201,149252757,149258291 149142108,149183589,149198402,149200428,149207134,149210819,149217046,149230707,149233300,149239888,149242538,149245015,149246546,149247929,149249844,149250505,149251419,149252208,149252837,149260436 Gene ID= ENSG00000173210.19 TPM= 4.37 Transcript Type= NA chr5 149271870 149342521 149271870 149342521 + transcript2308.chr5.nnic@AFAP1L1 transcript2308.chr5.nnic protein_coding 149271870,149298774,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112,149315821,149316151,149317729,149319582,149320391,149322606,149329666,149332695,149335594,149340007 149271984,149298901,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312204,149315914,149316303,149317940,149319727,149320463,149322717,149329830,149332873,149335722,149342521 Gene ID= ENSG00000157510.13 TPM= 3.17 Transcript Type= NA chr5 149271871 149341802 149271871 149341802 + ENST00000296721.8@AFAP1L1 ENST00000296721.8 protein_coding 149271871,149299509,149300271,149301133,149302418,149306306,149307402,149309956,149312112,149315821,149316151,149317729,149319582,149320391,149322606,149329666,149332695,149335594,149340007 149271984,149299637,149300354,149301230,149302526,149306404,149307613,149310135,149312204,149315914,149316303,149317940,149319727,149320463,149322717,149329830,149332873,149335722,149341802 Gene ID= ENSG00000157510.13 TPM= 21.28 Transcript Type= protein_coding chr5 149345430 149354583 149345430 149354583 + ENST00000329271.7@GRPEL2 ENST00000329271.7 protein_coding 149345430,149348272,149349654,149350918 149345616,149348425,149349735,149354583 Gene ID= ENSG00000164284.14 TPM= 3.62 Transcript Type= protein_coding chr5 149358007 149369653 149358007 149369653 + ENST00000274569.8@PCYOX1L ENST00000274569.8 protein_coding 149358007,149362637,149364036,149365942,149367360,149367993 149358156,149362843,149364210,149366153,149367500,149369653 Gene ID= ENSG00000145882.10 TPM= 26.26 Transcript Type= protein_coding chr5 149406877 149425662 149406877 149425662 + ENST00000519898.5@CARMN ENST00000519898.5 lincRNA 149406877,149421481,149424090,149425097 149407078,149421601,149424397,149425662 Gene ID= ENSG00000249669.9 TPM= 1.81 Transcript Type= lincRNA chr5 149406878 149425657 149406878 149425657 + transcript2325.chr5.nic@CARMN transcript2325.chr5.nic lincRNA 149406878,149421481,149424090 149407078,149421601,149425657 Gene ID= ENSG00000249669.9 TPM= 1.81 Transcript Type= NA chr5 149494317 149551863 149494317 149551863 - transcript2329.chr5.nic@CSNK1A1 transcript2329.chr5.nic protein_coding 149550842,149550075,149525045,149520290,149517794,149513070,149511794,149509879,149507027,149505483,149494317 149551863,149550181,149525171,149520388,149517877,149513209,149511872,149509953,149507133,149505595,149496860 Gene ID= ENSG00000113712.17 TPM= 43.92 Transcript Type= NA chr5 149495896 149551552 149495896 149551552 - ENST00000377843.6@CSNK1A1 ENST00000377843.6 protein_coding 149550842,149550075,149525045,149520290,149513070,149511794,149509879,149507027,149505447,149495896 149551552,149550181,149525171,149520388,149513209,149511872,149509953,149507133,149505595,149496860 Gene ID= ENSG00000113712.17 TPM= 49.35 Transcript Type= protein_coding chr5 149581473 149634968 149581473 149634968 + ENST00000333677.6@ARHGEF37 ENST00000333677.6 protein_coding 149581473,149597759,149601108,149609548,149616567,149618176,149618938,149620354,149621733,149624012,149627076,149628809,149631982 149581624,149597955,149601231,149609695,149616766,149618306,149619042,149620464,149622062,149624140,149627271,149628966,149634968 Gene ID= ENSG00000183111.11 TPM= 3.62 Transcript Type= protein_coding chr5 149960737 149987405 149960737 149987405 + ENST00000286298.4@SLC26A2 ENST00000286298.4 protein_coding 149960737,149977628,149980293 149960979,149978351,149987405 Gene ID= ENSG00000155850.7 TPM= 1.81 Transcript Type= protein_coding chr5 149993118 150001167 149993118 150001167 - ENST00000296736.3@TIGD6 ENST00000296736.3 protein_coding 150000474,149993118 150001167,149996429 Gene ID= ENSG00000164296.6 TPM= 8.15 Transcript Type= protein_coding chr5 150000046 150053142 150000046 150053142 + ENST00000613459.4@HMGXB3 ENST00000613459.4 protein_coding 150000046,150000454,150004851,150006473,150010111,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725 150000055,150001179,150004989,150006647,150010608,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053142 Gene ID= ENSG00000113716.12 TPM= 33.96 Transcript Type= protein_coding chr5 150000695 150053134 150000695 150053134 + transcript2351.chr5.nnic@HMGXB3 transcript2351.chr5.nnic protein_coding 150000695,150004851,150006473,150012255,150018566,150024262,150026706,150027020,150030741,150032454,150036636,150037400,150040748,150041785,150045466,150047624,150048569,150050252,150051725 150001179,150004989,150006647,150012353,150018697,150024680,150026881,150027117,150030839,150032603,150036937,150037527,150040879,150041969,150045685,150047757,150048685,150050461,150053134 Gene ID= ENSG00000113716.12 TPM= 12.22 Transcript Type= NA chr5 150053032 150086629 150053032 150086629 - transcript2341.chr5.nic@CSF1R transcript2341.chr5.nic protein_coding 150086379,150080767,150080052,150078112,150077276,150073301,150070456,150070182,150069873,150068215,150061723,150061491,150060862,150059700,150057504,150057287,150056219,150056026,150055237,150054322,150053032 150086629,150081024,150080336,150078248,150077435,150073493,150070571,150070302,150070063,150068330,150061849,150061595,150060972,150059862,150057592,150057384,150056341,150056137,150055336,150054430,150054224 Gene ID= ENSG00000182578.13 TPM= 172.96 Transcript Type= NA chr5 150113840 150155840 150113840 150155840 - transcript2369.chr5.nic@PDGFRB transcript2369.chr5.nic protein_coding 150155397,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113840 150155840,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150118852,150117850,150115946 Gene ID= ENSG00000113721.13 TPM= 2.26 Transcript Type= NA chr5 150113837 150155860 150113837 150155860 - ENST00000261799.8@PDGFRB ENST00000261799.8 protein_coding 150155397,150137008,150135555,150134750,150133881,150133586,150132750,150131979,150130539,150129757,150126520,150125445,150124727,150124250,150123042,150121880,150121204,150120888,150120012,150119467,150118747,150117618,150113837 150155860,150137053,150135878,150135016,150134008,150133760,150132942,150132094,150130662,150129968,150126614,150125577,150124831,150124360,150123201,150122040,150121322,150121010,150120123,150119566,150118852,150117850,150115946 Gene ID= ENSG00000113721.13 TPM= 62.03 Transcript Type= protein_coding chr5 150357639 150400307 150357639 150400307 + ENST00000377797.7@TCOF1 ENST00000377797.7 protein_coding 150357639,150361156,150364113,150367844,150368716,150369529,150372006,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392708,150393372,150396282,150398354,150399022,150399810 150357854,150361211,150364252,150367917,150368902,150369602,150372236,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400307 Gene ID= ENSG00000070814.17 TPM= 8.45 Transcript Type= protein_coding chr5 150357649 150400307 150357649 150400307 + transcript2375.chr5.nnic@TCOF1 transcript2375.chr5.nnic protein_coding 150357649,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379532,150387902,150389887,150391544,150391957,150392705,150393372,150396282,150398354,150399022,150399810 150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400307 Gene ID= ENSG00000070814.17 TPM= 3.02 Transcript Type= NA chr5 150357672 150400308 150357672 150400308 + ENST00000323668.11@TCOF1 ENST00000323668.11 protein_coding 150357672,150361156,150364113,150367844,150368716,150369529,150374174,150374617,150374954,150375339,150375721,150376082,150376423,150378905,150379229,150379532,150387902,150389887,150391544,150391957,150392708,150393372,150396282,150398354,150399022,150399810 150357854,150361211,150364252,150367917,150368902,150369602,150374386,150374811,150375163,150375554,150375909,150376330,150376620,150379042,150379408,150379732,150388088,150390023,150391657,150392176,150392790,150393552,150396842,150398451,150399070,150400308 Gene ID= ENSG00000070814.17 TPM= 3.02 Transcript Type= protein_coding chr5 150401670 150412929 150401670 150412929 - ENST00000353334.10@CD74 ENST00000353334.10 protein_coding 150412625,150407152,150406881,150406259,150405085,150404680,150402563,150401670 150412929,150407324,150406960,150406321,150405180,150404767,150402625,150402250 Gene ID= ENSG00000019582.14 TPM= 497.14 Transcript Type= protein_coding chr5 150401637 150412769 150401637 150412769 - ENST00000377795.7@CD74 ENST00000377795.7 protein_coding 150412625,150407152,150406881,150406259,150402563,150401637 150412769,150407324,150406960,150406321,150402625,150402250 Gene ID= ENSG00000019582.14 TPM= 25.36 Transcript Type= protein_coding chr5 150443190 150449747 150443190 150449747 - ENST00000401695.7@RPS14 ENST00000401695.7 protein_coding 150449703,150447585,150446802,150445609,150443190 150449747,150447735,150446963,150445685,150444353 Gene ID= ENSG00000164587.11 TPM= 917.92 Transcript Type= protein_coding chr5 150444231 150449756 150444231 150449756 - ENST00000407193.5@RPS14 ENST00000407193.5 protein_coding 150449486,150447585,150446802,150445609,150444231 150449756,150447735,150446963,150445685,150444353 Gene ID= ENSG00000164587.11 TPM= 16.91 Transcript Type= protein_coding chr5 150444238 150449696 150444238 150449696 - ENST00000312037.5@RPS14 ENST00000312037.5 protein_coding 150449492,150447585,150446802,150445609,150444238 150449696,150447735,150446963,150445685,150444353 Gene ID= ENSG00000164587.11 TPM= 13.88 Transcript Type= protein_coding chr5 150485803 150556798 150485803 150556798 + transcript2403.chr5.nnic@NDST1 transcript2403.chr5.nnic protein_coding 150485803,150518798,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213 150486023,150518919,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150556798 Gene ID= ENSG00000070614.14 TPM= 2.49 Transcript Type= NA chr5 150485779 150556798 150485779 150556798 + transcript2405.chr5.nic@NDST1 transcript2405.chr5.nic protein_coding 150485779,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213 150486003,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150556798 Gene ID= ENSG00000070614.14 TPM= 7.02 Transcript Type= NA chr5 150486221 150556798 150486221 150556798 + transcript2407.chr5.nic@NDST1 transcript2407.chr5.nic protein_coding 150486221,150520868,150527804,150532945,150534867,150535700,150539228,150540082,150541570,150542848,150545312,150548218,150549678,150551753,150553213 150486407,150521767,150528298,150533032,150535021,150535885,150539356,150540264,150541666,150542971,150545486,150548388,150549787,150551855,150556798 Gene ID= ENSG00000070614.14 TPM= 5.21 Transcript Type= NA chr5 150485779 150539850 150485779 150539850 + transcript2409.chr5.nic@NDST1 transcript2409.chr5.nic protein_coding 150485779,150520868,150527804,150532945,150534867,150535700,150539228 150486003,150521767,150528298,150533032,150535021,150535885,150539850 Gene ID= ENSG00000070614.14 TPM= 3.62 Transcript Type= NA chr5 150486221 150539771 150486221 150539771 + transcript2411.chr5.nic@NDST1 transcript2411.chr5.nic protein_coding 150486221,150520868,150527804,150532945,150534867,150535700,150539228 150486407,150521767,150528298,150533032,150535021,150535885,150539771 Gene ID= ENSG00000070614.14 TPM= 3.62 Transcript Type= NA chr5 150640658 150659220 150640658 150659220 + ENST00000307662.4@SYNPO ENST00000307662.4 protein_coding 150640658,150647944,150656404 150640854,150650303,150659220 Gene ID= ENSG00000171992.12 TPM= 67.01 Transcript Type= protein_coding chr5 150640678 150652337 150640678 150652337 + ENST00000519664.1@SYNPO ENST00000519664.1 protein_coding 150640678,150647944 150640854,150652337 Gene ID= ENSG00000171992.12 TPM= 9.06 Transcript Type= protein_coding chr5 150690788 150701035 150690788 150701035 - transcript2421.chr5.nic@RBM22 transcript2421.chr5.nic protein_coding 150700932,150700444,150699242,150698499,150696791,150696533,150694076,150693219,150692895,150690788 150701035,150700497,150699271,150698631,150696891,150696705,150695706,150693307,150693026,150691881 Gene ID= ENSG00000086589.11 TPM= 1.81 Transcript Type= NA chr5 150690794 150701107 150690794 150701107 - ENST00000199814.8@RBM22 ENST00000199814.8 protein_coding 150700932,150700444,150699242,150698499,150696791,150696533,150695506,150694076,150693219,150692895,150690794 150701107,150700497,150699271,150698631,150696891,150696705,150695706,150694240,150693307,150693026,150691881 Gene ID= ENSG00000086589.11 TPM= 47.99 Transcript Type= protein_coding chr5 150708440 150759109 150708440 150759109 - ENST00000447998.6@DCTN4 ENST00000447998.6 protein_coding 150758859,150756417,150753479,150742114,150733368,150731416,150731044,150730631,150722907,150719716,150718276,150715565,150708440 150759109,150756487,150753657,150742157,150733475,150731489,150731156,150730740,150722980,150719770,150718383,150715662,150711362 Gene ID= ENSG00000132912.12 TPM= 30.34 Transcript Type= protein_coding chr5 150708742 150743355 150708742 150743355 - transcript2423.chr5.nic@DCTN4 transcript2423.chr5.nic protein_coding 150742818,150742114,150733368,150731416,150731044,150730631,150722907,150719716,150718276,150715565,150708742 150743355,150742157,150733475,150731489,150731156,150730740,150722980,150719770,150718383,150715662,150711362 Gene ID= ENSG00000132912.12 TPM= 13.13 Transcript Type= NA chr5 150777946 150796734 150777946 150796734 + ENST00000526627.1@SMIM3 ENST00000526627.1 protein_coding 150777946,150795430 150778972,150796734 Gene ID= ENSG00000256235.1 TPM= 75.16 Transcript Type= protein_coding chr5 150930523 150946551 150930523 150946551 - transcript2427.chr5.nnic@ZNF300P1 transcript2427.chr5.nnic transcribed_unprocessed_pseudogene 150946306,150943814,150942550,150942218,150930523 150946551,150943872,150942676,150942313,150932290 Gene ID= ENSG00000197083.11 TPM= 1.81 Transcript Type= NA chr5 151020557 151028992 151020557 151028992 + transcript2435.chr5.nnic@GPX3 transcript2435.chr5.nnic protein_coding 151020557,151025340,151026900,151027432,151027909,151028898 151020741,151025493,151027017,151027531,151028770,151028992 Gene ID= ENSG00000211445.11 TPM= 14.84 Transcript Type= NA chr5 151020563 151028993 151020563 151028993 + ENST00000388825.8@GPX3 ENST00000388825.8 protein_coding 151020563,151025340,151026900,151027432,151027909 151020741,151025493,151027017,151027531,151028993 Gene ID= ENSG00000211445.11 TPM= 580.96 Transcript Type= protein_coding chr5 151020438 151028992 151020438 151028992 + ENST00000622181.4@GPX3 ENST00000622181.4 protein_coding 151020438,151025340,151025472,151026900,151027432,151027909 151020741,151025468,151025493,151027017,151027531,151028992 Gene ID= ENSG00000211445.11 TPM= 7.53 Transcript Type= protein_coding chr5 151020589 151028987 151020589 151028987 + ENST00000614343.4@GPX3 ENST00000614343.4 protein_coding 151020589,151025340,151026900,151027432,151027909,151028903 151020741,151025493,151027017,151027531,151028776,151028987 Gene ID= ENSG00000211445.11 TPM= 16.65 Transcript Type= protein_coding chr5 151029947 151081084 151029947 151081084 - ENST00000389378.6@TNIP1 ENST00000389378.6 protein_coding 151080880,151064960,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029947 151081084,151065131,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032400,151030747 Gene ID= ENSG00000145901.14 TPM= 118.67 Transcript Type= protein_coding chr5 151029945 151081016 151029945 151081016 - ENST00000520931.5@TNIP1 ENST00000520931.5 protein_coding 151080880,151063613,151062127,151060318,151056766,151052165,151049824,151045861,151042896,151042540,151039097,151036790,151035582,151035002,151033608,151032287,151029945 151081016,151063747,151062212,151060395,151056957,151052259,151049947,151045950,151042961,151042671,151039225,151036921,151035707,151035067,151033799,151032383,151030747 Gene ID= ENSG00000145901.14 TPM= 7.9 Transcript Type= protein_coding chr5 151101105 151157882 151101105 151157882 - ENST00000354546.9@ANXA6 ENST00000354546.9 protein_coding 151157680,151147884,151140153,151139353,151138678,151137231,151136256,151134427,151133094,151132476,151131231,151129407,151128181,151126402,151124286,151122917,151122147,151119300,151117758,151117127,151110627,151109753,151108455,151105245,151103570,151101105 151157882,151147926,151140243,151139447,151138791,151137321,151136335,151134483,151133187,151132571,151131289,151129529,151128239,151126480,151124367,151123011,151122260,151119390,151117837,151117180,151110644,151109846,151108550,151105303,151103692,151101507 Gene ID= ENSG00000197043.13 TPM= 340.94 Transcript Type= protein_coding chr5 151181052 151224145 151181052 151224145 - ENST00000355417.6@CCDC69 ENST00000355417.6 protein_coding 151223923,151205400,151201582,151198997,151187386,151186023,151185422,151184344,151181052 151224145,151205475,151201688,151199084,151187459,151186124,151185541,151184441,151183614 Gene ID= ENSG00000198624.12 TPM= 483.86 Transcript Type= protein_coding chr5 151181052 151224093 151181052 151224093 - ENST00000521308.5@CCDC69 ENST00000521308.5 protein_coding 151223923,151201582,151198997,151187386,151186023,151185422,151184344,151181052 151224093,151201688,151199084,151187459,151186124,151185541,151184441,151183614 Gene ID= ENSG00000198624.12 TPM= 17.05 Transcript Type= processed_transcript chr5 151252892 151270440 151252892 151270440 + ENST00000357164.3@GM2A ENST00000357164.3 protein_coding 151252892,151259755,151266731,151267296 151253297,151259916,151266913,151270440 Gene ID= ENSG00000196743.8 TPM= 72.44 Transcript Type= protein_coding chr5 151447596 151492381 151447596 151492381 + ENST00000243389.7@SLC36A1 ENST00000243389.7 protein_coding 151447596,151458788,151463553,151464514,151465074,151467199,151467707,151473673,151476590,151479320,151487983 151447813,151458935,151463643,151464602,151465169,151467283,151467925,151473771,151476756,151479489,151492381 Gene ID= ENSG00000123643.12 TPM= 4.53 Transcript Type= protein_coding chr5 151742822 151772532 151742822 151772532 - ENST00000524142.5@ATOX1 ENST00000524142.5 protein_coding 151772403,151758546,151751704,151746279,151742822 151772532,151758779,151751779,151746449,151742959 Gene ID= ENSG00000177556.11 TPM= 94.63 Transcript Type= protein_coding chr5 151742821 151758608 151742821 151758608 - transcript2497.chr5.nnic@ATOX1 transcript2497.chr5.nnic protein_coding 151758546,151746279,151742821 151758608,151746449,151742959 Gene ID= ENSG00000177556.11 TPM= 2.72 Transcript Type= NA chr5 151742823 151758657 151742823 151758657 - transcript2498.chr5.nnic@ATOX1 transcript2498.chr5.nnic protein_coding 151758546,151751704,151742823 151758657,151751779,151742959 Gene ID= ENSG00000177556.11 TPM= 2.72 Transcript Type= NA chr5 151742823 151758649 151742823 151758649 - ENST00000313115.10@ATOX1 ENST00000313115.10 protein_coding 151758546,151751704,151746279,151742823 151758649,151751779,151746449,151742959 Gene ID= ENSG00000177556.11 TPM= 90.1 Transcript Type= protein_coding chr5 151771910 151812785 151771910 151812785 + ENST00000394123.7@G3BP1 ENST00000394123.7 protein_coding 151771910,151786603,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885 151772036,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151812785 Gene ID= ENSG00000145907.14 TPM= 50.78 Transcript Type= protein_coding chr5 151771943 151805350 151771943 151805350 + ENST00000356245.7@G3BP1 ENST00000356245.7 protein_coding 151771943,151786572,151790323,151790889,151794159,151795479,151797227,151799212,151799889,151800218,151800760,151803885 151772036,151786715,151790404,151791062,151794249,151795575,151797428,151799313,151800000,151800346,151800869,151805350 Gene ID= ENSG00000145907.14 TPM= 136.96 Transcript Type= protein_coding chr5 153991766 154038908 153991766 154038908 - transcript2511.chr5.nic@FAM114A2 transcript2511.chr5.nic protein_coding 154038857,154038293,154034744,154034278,154033791,154029489,154028149,154027176,154026399,154011241,154002847,154002251,153997803,153994919,153991766 154038908,154038434,154034967,154034377,154033883,154029580,154028283,154027334,154026522,154011320,154002969,154002390,153997875,153994972,153993110 Gene ID= ENSG00000055147.18 TPM= 4.53 Transcript Type= NA chr5 153990128 154038919 153990128 154038919 - ENST00000351797.8@FAM114A2 ENST00000351797.8 protein_coding 154038857,154034744,154034278,154033791,154029489,154028149,154027176,154026399,154011241,154002847,154002251,153997803,153994919,153990128 154038919,154034967,154034377,154033883,154029580,154028283,154027334,154026522,154011320,154002969,154002390,153997875,153994972,153993110 Gene ID= ENSG00000055147.18 TPM= 26.26 Transcript Type= protein_coding chr5 154038968 154057422 154038968 154057422 + transcript2517.chr5.nic@MFAP3 transcript2517.chr5.nic protein_coding 154038968,154049557,154051737,154052920 154039011,154050017,154051943,154057422 Gene ID= ENSG00000037749.11 TPM= 6.34 Transcript Type= NA chr5 154190730 154420984 154190730 154420984 + ENST00000297107.10@GALNT10 ENST00000297107.10 protein_coding 154190730,154294816,154297941,154329572,154376277,154380448,154386313,154404104,154409541,154412889,154415783,154416814 154191025,154294918,154298079,154329738,154376462,154380631,154386430,154404211,154409762,154413005,154415932,154420984 Gene ID= ENSG00000164574.15 TPM= 42.56 Transcript Type= protein_coding chr5 154445957 154461054 154445957 154461054 + ENST00000297109.10@SAP30L ENST00000297109.10 protein_coding 154445957,154451091,154453402,154455900 154446805,154451213,154453500,154461054 Gene ID= ENSG00000164576.11 TPM= 32.6 Transcript Type= protein_coding chr5 154682645 154817604 154682645 154817604 + transcript2528.chr5.nnic@LARP1 transcript2528.chr5.nnic protein_coding 154682645,154790325,154790645,154792622,154793595,154793800,154794100,154795175,154799591,154799873,154802007,154803290,154803540,154804201,154805881,154808459,154811247,154811513,154813887 154683037,154790386,154790710,154792796,154793723,154794000,154794262,154795319,154799759,154800042,154802399,154803413,154803745,154804307,154806032,154808603,154811356,154811640,154817604 Gene ID= ENSG00000155506.16 TPM= 22.94 Transcript Type= NA chr5 154755305 154817604 154755305 154817604 + transcript2530.chr5.nic@LARP1 transcript2530.chr5.nic protein_coding 154755305,154790325,154790645,154792622,154793595,154793800,154794100,154795175,154799591,154799873,154802007,154803290,154803540,154804201,154805881,154808459,154811247,154811513,154813887 154756193,154790386,154790710,154792796,154793723,154794000,154794262,154795319,154799759,154800042,154802399,154803413,154803745,154804307,154806032,154808603,154811356,154811640,154817604 Gene ID= ENSG00000155506.16 TPM= 23.84 Transcript Type= NA chr5 154757173 154817604 154757173 154817604 + transcript2532.chr5.nic@LARP1 transcript2532.chr5.nic protein_coding 154757173,154790325,154790645,154792622,154793595,154793800,154794100,154795175,154799591,154799873,154802007,154803290,154803540,154804201,154805881,154808459,154811247,154811513,154813887 154757290,154790386,154790710,154792796,154793723,154794000,154794262,154795319,154799759,154800042,154802399,154803413,154803745,154804307,154806032,154808603,154811356,154811640,154817604 Gene ID= ENSG00000155506.16 TPM= 23.84 Transcript Type= NA chr5 154818488 154850623 154818488 154850623 - transcript2533.chr5.nic@FAXDC2 transcript2533.chr5.nic protein_coding 154850483,154838563,154838131,154834843,154834625,154830801,154823387,154822472,154821260,154818488 154850623,154838939,154838178,154834934,154834728,154830922,154823592,154822577,154821426,154820472 Gene ID= ENSG00000170271.10 TPM= 12.68 Transcript Type= NA chr5 154858252 154876792 154858252 154876792 + ENST00000517876.5@CNOT8 ENST00000517876.5 protein_coding 154858252,154858639,154863207,154865192,154870661,154871730,154872541,154875290 154858525,154858768,154863395,154865385,154870822,154871874,154872651,154876792 Gene ID= ENSG00000155508.13 TPM= 31.8 Transcript Type= protein_coding chr5 154858226 154876793 154858226 154876793 + transcript2547.chr5.nic@CNOT8 transcript2547.chr5.nic protein_coding 154858226,154858639,154863207,154865192,154871730,154872541,154875290 154858525,154858768,154863395,154865385,154871874,154872651,154876793 Gene ID= ENSG00000155508.13 TPM= 6.95 Transcript Type= NA chr5 154858517 154876792 154858517 154876792 + ENST00000403027.6@CNOT8 ENST00000403027.6 protein_coding 154858517,154863207,154865192,154870661,154871730,154872541,154875290 154858816,154863395,154865385,154870822,154871874,154872651,154876792 Gene ID= ENSG00000155508.13 TPM= 10.52 Transcript Type= protein_coding chr5 154858546 154876793 154858546 154876793 + ENST00000285896.10@CNOT8 ENST00000285896.10 protein_coding 154858546,154863207,154865192,154870661,154871730,154872541,154875290 154858768,154863395,154865385,154870822,154871874,154872651,154876793 Gene ID= ENSG00000155508.13 TPM= 51.72 Transcript Type= protein_coding chr5 154887416 154938209 154887416 154938209 - ENST00000285873.7@GEMIN5 ENST00000285873.7 protein_coding 154937968,154937025,154935841,154932099,154931458,154928527,154927385,154925862,154924469,154921343,154919967,154917931,154916998,154912899,154911727,154907591,154905363,154904507,154903080,154902539,154901339,154899191,154898440,154896092,154892387,154891241,154889321,154887416 154938209,154937185,154936022,154932250,154931577,154928659,154927550,154926074,154924554,154921425,154920103,154918004,154917179,154913038,154911898,154907818,154905476,154904629,154903175,154902676,154901486,154899310,154898650,154896343,154892549,154891742,154889417,154888377 Gene ID= ENSG00000082516.8 TPM= 5.43 Transcript Type= protein_coding chr5 156326757 156759604 156326757 156759604 + ENST00000337851.8@SGCD ENST00000337851.8 protein_coding 156326757,156329534,156344489,156508601,156589231,156594932,156647464,156757581,156759217 156327232,156329579,156344677,156508702,156589318,156595051,156647536,156757704,156759604 Gene ID= ENSG00000170624.13 TPM= 2.72 Transcript Type= protein_coding chr5 157085832 157107308 157085832 157107308 - transcript2567.chr5.nic@HAVCR2 transcript2567.chr5.nic protein_coding 157107046,157106627,157104666,157098858,157095306,157088941,157085832 157107308,157106962,157104749,157098901,157095459,157088977,157087294 Gene ID= ENSG00000135077.8 TPM= 3.17 Transcript Type= NA chr5 157085832 157107332 157085832 157107332 - transcript2569.chr5.nic@HAVCR2 transcript2569.chr5.nic protein_coding 157106627,157104666,157098858,157095306,157088941,157085832 157107332,157104749,157098901,157095459,157088977,157087294 Gene ID= ENSG00000135077.8 TPM= 3.17 Transcript Type= NA chr5 157138442 157142775 157138442 157142775 - ENST00000420343.1@MED7 ENST00000420343.1 protein_coding 157142401,157138442 157142775,157139448 Gene ID= ENSG00000155868.7 TPM= 3.62 Transcript Type= protein_coding chr5 157266081 157393224 157266081 157393224 + ENST00000620254.4@CYFIP2 ENST00000620254.4 protein_coding 157266081,157285339,157287019,157294783,157296673,157300715,157302794,157304238,157307761,157309743,157311664,157314344,157314969,157319762,157320655,157323921,157325482,157326171,157327973,157330742,157333327,157339057,157341070,157359005,157360282,157361468,157382590,157383265,157389189,157390521,157392833 157266195,157285478,157287108,157294860,157296774,157300896,157302890,157304366,157307865,157309834,157311781,157314463,157315094,157319928,157320802,157324074,157325638,157326267,157328049,157330850,157333446,157339256,157341157,157359148,157360372,157361598,157382662,157383359,157389427,157390668,157393224 Gene ID= ENSG00000055163.19 TPM= 34.41 Transcript Type= protein_coding chr5 157477304 157575775 157477304 157575775 - ENST00000257527.8@ADAM19 ENST00000257527.8 protein_coding 157575603,157570895,157564373,157537913,157530807,157519839,157518823,157513434,157509301,157507056,157505669,157502803,157499573,157496894,157494687,157492973,157491835,157491615,157490310,157489102,157488265,157481791,157477304 157575775,157570980,157564443,157537991,157530883,157520031,157518888,157513505,157509467,157507140,157505808,157502980,157499662,157497089,157494795,157493177,157491912,157491723,157490454,157489186,157488489,157481943,157481002 Gene ID= ENSG00000135074.15 TPM= 1.81 Transcript Type= protein_coding chr5 157731197 157741448 157731197 157741448 + ENST00000231198.11@THG1L ENST00000231198.11 protein_coding 157731197,157732868,157734576,157735846,157737887,157739321 157731631,157733044,157734745,157735934,157737994,157741448 Gene ID= ENSG00000113272.13 TPM= 16.3 Transcript Type= protein_coding chr5 157731402 157739821 157731402 157739821 + transcript2578.chr5.nnic@THG1L transcript2578.chr5.nnic protein_coding 157731402,157732868,157734576,157735846,157739321 157731631,157733044,157734745,157735934,157739821 Gene ID= ENSG00000113272.13 TPM= 1.81 Transcript Type= NA chr5 157785743 157859145 157785743 157859145 - ENST00000523094.5@CLINT1 ENST00000523094.5 protein_coding 157858953,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157785743 157859145,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789567,157787992 Gene ID= ENSG00000113282.13 TPM= 1.81 Transcript Type= protein_coding chr5 157786289 157859175 157786289 157859175 - ENST00000411809.6@CLINT1 ENST00000411809.6 protein_coding 157858930,157817443,157816734,157814185,157813063,157809628,157805866,157803650,157794898,157791703,157789363,157786289 157859175,157817547,157816830,157814293,157813227,157809805,157806112,157803719,157794972,157791995,157789513,157787992 Gene ID= ENSG00000113282.13 TPM= 85.12 Transcript Type= protein_coding chr5 158032197 158050630 158032197 158050630 . transcript2592.chr5.nnic@NA transcript2592.chr5.nnic NA 158032197,158037310,158045222,158050571 158034104,158038008,158045340,158050630 Gene ID= novel_gene_chr5_2593 TPM= 1.81 Transcript Type= NA chr5 158696932 158840114 158696932 158840114 - transcript2596.chr5.nnic@EBF1 transcript2596.chr5.nnic protein_coding 158840029,158823176,158796345,158777413,158731069,158714117,158712970,158712154,158707979,158696932 158840114,158823317,158796478,158777539,158731159,158714184,158713147,158712333,158708173,158699142 Gene ID= ENSG00000164330.16 TPM= 16.3 Transcript Type= NA chr5 159073394 159099917 159073394 159099917 - transcript2599.chr5.nnic@EBF1 transcript2599.chr5.nnic protein_coding 159099345,159096974,159096343,159095620,159084666,159073394 159099917,159097132,159096406,159095675,159084739,159073464 Gene ID= ENSG00000164330.16 TPM= 3.62 Transcript Type= NA chr5 159084647 159099917 159084647 159099917 - transcript2600.chr5.nnic@EBF1 transcript2600.chr5.nnic protein_coding 159099345,159095620,159084647 159099917,159097132,159084739 Gene ID= ENSG00000164330.16 TPM= 1.81 Transcript Type= NA chr5 159157411 159209581 159157411 159209581 - transcript2602.chr5.nic@RNF145 transcript2602.chr5.nic protein_coding 159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159158840,159157411 159209581,159203656,159194824,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035,159158426 Gene ID= ENSG00000145860.11 TPM= 22.64 Transcript Type= NA chr5 159157409 159209551 159157409 159209551 - ENST00000424310.6@RNF145 ENST00000424310.6 protein_coding 159209231,159203434,159194716,159181960,159176632,159173983,159169679,159168873,159162932,159161266,159157409 159209551,159203656,159194824,159182051,159176867,159174158,159169819,159169055,159163079,159161622,159159035 Gene ID= ENSG00000145860.11 TPM= 83.31 Transcript Type= protein_coding chr5 159263081 159286040 159263081 159286040 + ENST00000296786.7@UBLCP1 ENST00000296786.7 protein_coding 159263081,159268870,159269908,159270360,159270528,159272023,159274585,159275148,159278238,159283212,159284904 159263360,159269069,159269999,159270445,159270643,159272121,159274622,159275246,159278354,159283339,159286040 Gene ID= ENSG00000164332.7 TPM= 21.73 Transcript Type= protein_coding chr5 160009113 160065543 160009113 160065543 + ENST00000231238.9@TTC1 ENST00000231238.9 protein_coding 160009113,160010500,160035140,160036691,160043133,160049514,160051129,160064932 160009193,160010858,160035200,160036803,160043169,160049662,160051183,160065543 Gene ID= ENSG00000113312.10 TPM= 48.9 Transcript Type= protein_coding chr5 160009114 160065544 160009114 160065544 + transcript2616.chr5.nnic@TTC1 transcript2616.chr5.nnic protein_coding 160009114,160010500,160035140,160036691,160043133,160051129,160064932 160009193,160010858,160035200,160036803,160043169,160051183,160065544 Gene ID= ENSG00000113312.10 TPM= 1.81 Transcript Type= NA chr5 160075882 160119423 160075882 160119423 - ENST00000456329.7@PWWP2A ENST00000456329.7 protein_coding 160118805,160093101,160080651,160075882 160119423,160094065,160080770,160078168 Gene ID= ENSG00000170234.12 TPM= 8.15 Transcript Type= protein_coding chr5 160213718 160238733 160213718 160238733 + transcript2622.chr5.nic@FABP6 transcript2622.chr5.nic protein_coding 160213718,160229546,160232098,160234820,160238606 160213819,160229624,160232273,160234909,160238733 Gene ID= ENSG00000170231.15 TPM= 14.94 Transcript Type= NA chr5 160213730 160238733 160213730 160238733 + transcript2624.chr5.nnic@FABP6 transcript2624.chr5.nnic protein_coding 160213730,160232098,160234820,160238606 160213819,160232273,160234909,160238733 Gene ID= ENSG00000170231.15 TPM= 2.26 Transcript Type= NA chr5 160251655 160312638 160251655 160312638 - transcript2626.chr5.nic@CCNJL transcript2626.chr5.nic protein_coding 160312364,160311858,160280525,160259469,160255549,160254129,160251655 160312638,160311972,160280738,160259771,160255708,160254335,160253798 Gene ID= ENSG00000135083.14 TPM= 2.72 Transcript Type= NA chr5 160251655 160312554 160251655 160312554 - transcript2629.chr5.nic@CCNJL transcript2629.chr5.nic protein_coding 160312364,160311858,160280525,160259469,160251655 160312554,160311972,160280738,160259771,160255708 Gene ID= ENSG00000135083.14 TPM= 1.81 Transcript Type= NA chr5 160251659 160312268 160251659 160312268 - transcript2630.chr5.nic@CCNJL transcript2630.chr5.nic protein_coding 160311858,160280525,160259469,160255549,160251659 160312268,160280738,160259771,160255708,160253798 Gene ID= ENSG00000135083.14 TPM= 3.62 Transcript Type= NA chr5 160252980 160312600 160252980 160312600 - ENST00000257536.11@CCNJL ENST00000257536.11 protein_coding 160312364,160311858,160280525,160259469,160255549,160252980 160312600,160311972,160280738,160259771,160255708,160253798 Gene ID= ENSG00000135083.14 TPM= 1.81 Transcript Type= protein_coding chr5 160393148 160400097 160393148 160400097 - ENST00000408953.3@ZBED8 ENST00000408953.3 protein_coding 160399639,160393148 160400097,160395539 Gene ID= ENSG00000221886.3 TPM= 16.3 Transcript Type= protein_coding chr5 160401642 160419081 160401642 160419081 - transcript2635.chr5.nic@SLU7 transcript2635.chr5.nic protein_coding 160418596,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160401642 160419081,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464 Gene ID= ENSG00000164609.9 TPM= 3.62 Transcript Type= NA chr5 160401641 160419394 160401641 160419394 - ENST00000297151.8@SLU7 ENST00000297151.8 protein_coding 160419023,160415125,160414319,160413899,160413456,160412451,160408650,160408329,160407971,160407746,160407476,160406468,160405031,160404809,160404440,160401641 160419394,160415310,160414472,160413979,160413620,160412519,160408697,160408460,160408068,160407813,160407615,160406629,160405135,160404880,160404556,160403464 Gene ID= ENSG00000164609.9 TPM= 33.51 Transcript Type= protein_coding chr5 160421904 160428704 160421904 160428704 + ENST00000520452.5@PTTG1 ENST00000520452.5 protein_coding 160421904,160422302,160422709,160424237,160427715,160428602 160422155,160422403,160422893,160424330,160427873,160428704 Gene ID= ENSG00000164611.12 TPM= 1.81 Transcript Type= protein_coding chr5 163437571 163445014 163437571 163445014 + ENST00000393929.5@CCNG1 ENST00000393929.5 protein_coding 163437571,163437765,163439257,163441078,163441886,163442045,163442374,163443674 163437664,163437804,163439520,163441331,163441964,163442143,163442568,163445014 Gene ID= ENSG00000113328.18 TPM= 80.52 Transcript Type= protein_coding chr5 163437581 163445016 163437581 163445016 + ENST00000340828.6@CCNG1 ENST00000340828.6 protein_coding 163437581,163439257,163441078,163441886,163442045,163442374,163443674 163437804,163439520,163441331,163441964,163442143,163442568,163445016 Gene ID= ENSG00000113328.18 TPM= 141.19 Transcript Type= protein_coding chr5 163453578 163460089 163453578 163460089 - transcript2656.chr5.nic@NUDCD2 transcript2656.chr5.nic protein_coding 163458995,163457562,163456929,163453578 163460089,163457610,163457080,163454050 Gene ID= ENSG00000170584.10 TPM= 1.81 Transcript Type= NA chr5 163505569 163519149 163505569 163519149 + transcript2663.chr5.nnic@MAT2B transcript2663.chr5.nnic protein_coding 163505569,163512002,163518193 163505749,163512196,163519149 Gene ID= ENSG00000038274.16 TPM= 5.43 Transcript Type= NA chr5 163505548 163519322 163505548 163519322 + ENST00000321757.10@MAT2B ENST00000321757.10 protein_coding 163505548,163512002,163513555,163513842,163516518,163517561,163518193 163505749,163512196,163513669,163513994,163516711,163517674,163519322 Gene ID= ENSG00000038274.16 TPM= 99.61 Transcript Type= protein_coding chr5 168291651 168472303 168291651 168472303 + ENST00000265293.8@WWC1 ENST00000265293.8 protein_coding 168291651,168371424,168385211,168397724,168399488,168406198,168408507,168409922,168414348,168422008,168423533,168428033,168428707,168430137,168431252,168441682,168444494,168453968,168455356,168460650,168464729,168467840,168468951 168292271,168371533,168385414,168397800,168399567,168406327,168408653,168409995,168414590,168422097,168424068,168428141,168428787,168430223,168431444,168441834,168444585,168454100,168455520,168460742,168464962,168467964,168472303 Gene ID= ENSG00000113645.14 TPM= 1.81 Transcript Type= protein_coding chr5 168486445 168519299 168486445 168519299 + ENST00000231572.7@RARS ENST00000231572.7 protein_coding 168486445,168488602,168492659,168493894,168494550,168495315,168497228,168500591,168502001,168506021,168506722,168510581,168516778,168517815,168519081 168486543,168488736,168492847,168494002,168494650,168495436,168497348,168500720,168502105,168506199,168506831,168510686,168516950,168518062,168519299 Gene ID= ENSG00000113643.8 TPM= 51.62 Transcript Type= protein_coding chr5 168661740 169301129 168661740 169301129 - ENST00000519560.5@SLIT3 ENST00000519560.5 protein_coding 169300513,169251388,169244705,169193479,168883265,168844584,168823260,168817300,168806446,168795507,168789560,168785907,168774235,168772781,168762539,168760862,168753864,168752955,168749472,168748302,168724416,168722933,168722256,168712283,168710895,168707976,168700582,168696292,168692607,168686979,168685687,168683966,168673177,168671198,168669783,168661740 169301129,169251459,169244776,169193550,168883336,168844655,168823331,168817463,168806587,168795578,168789631,168785978,168774378,168772944,168762689,168760936,168754007,168753098,168749635,168748434,168724484,168723004,168722327,168712354,168711058,168708100,168700679,168696431,168692700,168687116,168685927,168684096,168673331,168671483,168669991,168666689 Gene ID= ENSG00000184347.14 TPM= 32.6 Transcript Type= protein_coding chr5 169583633 169604775 169583633 169604775 + transcript2672.chr5.nic@SPDL1 transcript2672.chr5.nic protein_coding 169583633,169587199,169588394,169591048,169593354,169594145,169594394,169594571,169596561,169598476,169598972,169601280,169604060 169583889,169587372,169588575,169591224,169593548,169594294,169594492,169594681,169596701,169598579,169599159,169601625,169604775 Gene ID= ENSG00000040275.16 TPM= 1.81 Transcript Type= NA chr5 169583634 169604778 169583634 169604778 + ENST00000265295.8@SPDL1 ENST00000265295.8 protein_coding 169583634,169588394,169591048,169593354,169594145,169594394,169594571,169596561,169598476,169598972,169601280,169604060 169583889,169588575,169591224,169593548,169594294,169594492,169594681,169596701,169598579,169599159,169601625,169604778 Gene ID= ENSG00000040275.16 TPM= 3.62 Transcript Type= protein_coding chr5 169637247 170083382 169637247 170083382 + ENST00000256935.12@DOCK2 ENST00000256935.12 protein_coding 169637247,169654403,169669288,169670542,169671078,169674297,169681744,169684196,169689252,169695803,169698374,169699382,169700014,169702303,169708169,169711935,169712120,169714028,169714360,169716213,169717384,169718657,169747396,169759705,169761519,169803058,169840757,169983068,169985828,169996086,170008497,170008688,170018960,170027863,170034399,170036515,170041055,170042013,170045816,170047510,170050256,170055305,170056684,170057580,170067510,170069137,170075947,170077710,170078975,170080163,170081842,170082796 169637369,169654486,169669328,169670597,169671174,169674445,169681879,169684350,169689333,169695938,169698449,169699458,169700139,169702427,169708267,169712007,169712223,169714211,169714457,169716302,169717484,169718791,169747504,169759775,169761625,169803206,169840852,169983166,169985922,169996164,170008597,170008746,170019108,170027948,170034555,170036555,170041145,170042132,170045905,170047614,170050397,170055386,170056768,170057666,170067686,170069220,170076084,170077837,170079146,170080283,170081984,170083382 Gene ID= ENSG00000134516.15 TPM= 7.24 Transcript Type= protein_coding chr5 170246237 170298227 170246237 170298227 - ENST00000046794.9@LCP2 ENST00000046794.9 protein_coding 170297534,170293310,170287970,170275795,170275320,170274301,170270719,170268385,170267009,170266808,170262967,170262842,170262635,170261107,170258866,170258037,170256526,170253119,170252434,170250730,170246237 170298227,170293372,170288016,170275860,170275351,170274338,170270917,170268482,170267075,170266891,170262992,170262861,170262742,170261137,170258878,170258166,170256575,170253213,170252511,170250885,170248819 Gene ID= ENSG00000043462.11 TPM= 12.68 Transcript Type= protein_coding chr5 170374671 170389677 170374671 170389677 - ENST00000274629.8@KCNMB1 ENST00000274629.8 protein_coding 170389259,170385314,170383679,170374671 170389677,170385471,170383850,170378973 Gene ID= ENSG00000145936.8 TPM= 3.62 Transcript Type= protein_coding chr5 171387648 171411137 171387648 171411137 + ENST00000296930.9@NPM1 ENST00000296930.9 protein_coding 171387648,171390051,171391305,171391706,171392710,171392914,171400153,171400839,171405302,171407700,171410527 171388006,171390130,171391424,171391799,171392816,171392978,171400210,171400925,171405403,171407774,171411137 Gene ID= ENSG00000181163.13 TPM= 361.61 Transcript Type= protein_coding chr5 171387829 171410884 171387829 171410884 + ENST00000351986.10@NPM1 ENST00000351986.10 protein_coding 171387829,171390051,171391305,171391706,171392710,171392914,171400153,171405302,171407700,171410527 171388006,171390130,171391424,171391799,171392816,171392978,171400210,171405403,171407774,171410884 Gene ID= ENSG00000181163.13 TPM= 6.64 Transcript Type= protein_coding chr5 171495028 171502749 171495028 171502749 + transcript2697.chr5.nnic@NA transcript2697.chr5.nnic NA 171495028,171501889,171502610 171495081,171501977,171502749 Gene ID= novel_gene_chr5_2698 TPM= 1.81 Transcript Type= NA chr5 172042073 172188386 172042073 172188386 - ENST00000176763.9@STK10 ENST00000176763.9 protein_coding 172187887,172156624,172127373,172117481,172107780,172106620,172105656,172096426,172093412,172090232,172082961,172082326,172064720,172061139,172057349,172055588,172054569,172052929,172042073 172188386,172156788,172127421,172117630,172107852,172106814,172105737,172096560,172093960,172090362,172083084,172082505,172064812,172061268,172057473,172055776,172054694,172053042,172045022 Gene ID= ENSG00000072786.12 TPM= 58.86 Transcript Type= protein_coding chr5 172209640 172284071 172209640 172284071 - ENST00000393792.2@UBTD2 ENST00000393792.2 protein_coding 172283596,172234122,172209640 172284071,172234358,172212227 Gene ID= ENSG00000168246.5 TPM= 34.41 Transcript Type= protein_coding chr5 172333499 172454523 172333499 172454523 - ENST00000311601.5@SH3PXD2B ENST00000311601.5 protein_coding 172454278,172422416,172406277,172394563,172382036,172373790,172362735,172358773,172353888,172350363,172347283,172346136,172333499 172454523,172422496,172406352,172394639,172382127,172373815,172362869,172358877,172354005,172350589,172347332,172346261,172339916 Gene ID= ENSG00000174705.12 TPM= 17.21 Transcript Type= protein_coding chr5 172768090 172771195 172768090 172771195 - ENST00000239223.3@DUSP1 ENST00000239223.3 protein_coding 172770586,172770161,172769575,172768090 172771195,172770306,172769794,172769132 Gene ID= ENSG00000120129.5 TPM= 1326.62 Transcript Type= protein_coding chr5 172834325 172915271 172834325 172915271 + transcript2739.chr5.nnic@ERGIC1 transcript2739.chr5.nnic protein_coding 172834325,172888699,172897002,172909667,172914714,172914947 172834433,172888760,172897074,172909761,172914838,172915271 Gene ID= ENSG00000113719.15 TPM= 2.72 Transcript Type= NA chr5 172834275 172952685 172834275 172952685 + ENST00000393784.7@ERGIC1 ENST00000393784.7 protein_coding 172834275,172888699,172897002,172909667,172914714,172924005,172926509,172932436,172935188,172950709 172834433,172888760,172897074,172909761,172914838,172924109,172926569,172932536,172935310,172952685 Gene ID= ENSG00000113719.15 TPM= 124.06 Transcript Type= protein_coding chr5 172959424 172969771 172959424 172969771 + ENST00000265100.6@RPL26L1 ENST00000265100.6 protein_coding 172959424,172959865,172968459,172969413 172959468,172960041,172968599,172969771 Gene ID= ENSG00000037241.7 TPM= 22.03 Transcript Type= protein_coding chr5 172958893 172969721 172958893 172969721 + ENST00000521476.5@RPL26L1 ENST00000521476.5 protein_coding 172958893,172959865,172968459,172969413 172959007,172960041,172968599,172969721 Gene ID= ENSG00000037241.7 TPM= 1.2 Transcript Type= protein_coding chr5 172959460 172969718 172959460 172969718 + ENST00000519239.5@RPL26L1 ENST00000519239.5 protein_coding 172959460,172959865,172968459,172969413 172959514,172960041,172968599,172969718 Gene ID= ENSG00000037241.7 TPM= 1.2 Transcript Type= protein_coding chr5 172983757 173035445 172983757 173035445 + ENST00000519374.5@ATP6V0E1 ENST00000519374.5 protein_coding 172983757,172994775,173020238,173034399 172983964,172994822,173020367,173035445 Gene ID= ENSG00000113732.8 TPM= 241.78 Transcript Type= protein_coding chr5 172983781 173034884 172983781 173034884 + ENST00000519911.5@ATP6V0E1 ENST00000519911.5 protein_coding 172983781,172994775,173034399 172983964,172994822,173034884 Gene ID= ENSG00000113732.8 TPM= 2.72 Transcript Type= protein_coding chr5 173056352 173139284 173056352 173139284 + ENST00000296953.6@CREBRF ENST00000296953.6 protein_coding 173056352,173080585,173086501,173090315,173108624,173110522,173112306,173123080,173133630 173056479,173080784,173086626,173091401,173108818,173110711,173112379,173123202,173139284 Gene ID= ENSG00000164463.12 TPM= 7.24 Transcript Type= protein_coding chr5 173057342 173137757 173057342 173137757 + transcript2750.chr5.nic@CREBRF transcript2750.chr5.nic protein_coding 173057342,173080585,173086501,173090315,173108624,173110522,173112306,173123080,173133630 173057683,173080784,173086626,173091401,173108818,173110711,173112379,173123202,173137757 Gene ID= ENSG00000164463.12 TPM= 3.62 Transcript Type= NA chr5 173144515 173164387 173144515 173164387 + ENST00000351486.9@BNIP1 ENST00000351486.9 protein_coding 173144515,173146866,173154322,173158744,173159933,173163725 173144629,173146958,173154413,173158845,173160051,173164387 Gene ID= ENSG00000113734.17 TPM= 9.96 Transcript Type= protein_coding chr5 173314713 173329503 173314713 173329503 - ENST00000265087.8@STC2 ENST00000265087.8 protein_coding 173328043,173325868,173323219,173314713 173329503,173326010,173323430,173318249 Gene ID= ENSG00000113739.10 TPM= 8.15 Transcript Type= protein_coding chr5 173607514 173616660 173607514 173616660 - ENST00000311086.8@BOD1 ENST00000311086.8 protein_coding 173616200,173613131,173609238,173607514 173616660,173613255,173609434,173608292 Gene ID= ENSG00000145919.10 TPM= 26.26 Transcript Type= protein_coding chr5 173786788 173809126 173786788 173809126 - transcript2765.chr5.nnic@LINC01485 transcript2765.chr5.nnic lincRNA 173808730,173790809,173790636,173788363,173787689,173786788 173809126,173790924,173790727,173789662,173787745,173787247 Gene ID= ENSG00000254211.5 TPM= 3.62 Transcript Type= NA chr5 173786788 173809126 173786788 173809126 - transcript2767.chr5.nnic@LINC01485 transcript2767.chr5.nnic lincRNA 173808730,173790809,173790636,173787689,173786788 173809126,173790924,173790727,173787745,173787247 Gene ID= ENSG00000254211.5 TPM= 9.96 Transcript Type= NA chr5 173888280 173961976 173888280 173961976 + ENST00000265085.9@CPEB4 ENST00000265085.9 protein_coding 173888280,173910523,173932450,173943026,173944967,173949508,173949960,173951824,173953091,173955910 173890858,173910604,173932500,173943049,173945140,173949597,173950078,173951938,173953272,173961976 Gene ID= ENSG00000113742.12 TPM= 28.98 Transcript Type= protein_coding chr5 175478395 175529742 175478395 175529742 + ENST00000321442.9@SFXN1 ENST00000321442.9 protein_coding 175478395,175492095,175509032,175510109,175511451,175512111,175513463,175516614,175521919,175522375,175526638 175478639,175492267,175509202,175510207,175511526,175512196,175513590,175516663,175521968,175522422,175529742 Gene ID= ENSG00000164466.12 TPM= 68.82 Transcript Type= protein_coding chr5 175657994 175710753 175657994 175710753 + transcript2780.chr5.nic@HRH2 transcript2780.chr5.nic protein_coding 175657994,175682709,175707779 175658155,175684309,175710753 Gene ID= ENSG00000113749.7 TPM= 4.53 Transcript Type= NA chr5 175916679 175968306 175916679 175968306 - transcript2782.chr5.nnic@THOC3 transcript2782.chr5.nnic protein_coding 175967942,175967111,175964951,175961273,175961051,175959920,175916679 175968306,175967267,175965155,175961434,175961151,175960132,175918172 Gene ID= ENSG00000051596.9 TPM= 2.72 Transcript Type= NA chr5 175916678 175968306 175916678 175968306 - transcript2784.chr5.nic@THOC3 transcript2784.chr5.nic protein_coding 175967942,175967111,175964951,175961273,175961051,175916678 175968306,175967267,175965155,175961434,175961151,175918172 Gene ID= ENSG00000051596.9 TPM= 6.34 Transcript Type= NA chr5 175959527 175968299 175959527 175968299 - ENST00000265097.8@THOC3 ENST00000265097.8 protein_coding 175967942,175967111,175964951,175961273,175961051,175959527 175968299,175967267,175965155,175961434,175961151,175960132 Gene ID= ENSG00000051596.9 TPM= 78.78 Transcript Type= protein_coding chr5 176113139 176127125 176113139 176127125 + transcript2788.chr5.nic@FAM153B transcript2788.chr5.nic protein_coding 176113139,176113800,176113956,176115593,176119545,176120847,176121745,176123997,176124263,176125020 176113378,176113867,176114061,176116252,176119699,176120980,176121814,176124120,176124432,176127125 Gene ID= ENSG00000182230.11 TPM= 1.81 Transcript Type= NA chr5 176238425 176346137 176238425 176346137 + transcript2807.chr5.nnic@SIMC1 transcript2807.chr5.nnic protein_coding 176238425,176313691,176322273,176324629,176336720,176337062,176345183 176238637,176313845,176322425,176324757,176336876,176337146,176346137 Gene ID= ENSG00000170085.17 TPM= 4.53 Transcript Type= NA chr5 176346061 176361968 176346061 176361968 - ENST00000298569.8@KIAA1191 ENST00000298569.8 protein_coding 176361602,176359811,176359481,176355571,176352622,176350613,176348250,176347921,176346061 176361968,176359918,176359567,176355749,176352748,176350737,176348356,176348063,176347808 Gene ID= ENSG00000122203.14 TPM= 123.76 Transcript Type= protein_coding chr5 176346062 176361765 176346062 176361765 - ENST00000393725.6@KIAA1191 ENST00000393725.6 protein_coding 176361602,176359811,176355571,176352622,176350613,176348250,176347921,176346062 176361765,176359918,176355749,176352748,176350737,176348356,176348063,176347808 Gene ID= ENSG00000122203.14 TPM= 27.77 Transcript Type= protein_coding chr5 176346065 176361807 176346065 176361807 - ENST00000614420.4@KIAA1191 ENST00000614420.4 protein_coding 176361602,176355571,176352622,176350613,176348250,176347921,176346065 176361807,176355749,176352748,176350737,176348356,176348063,176347808 Gene ID= ENSG00000122203.14 TPM= 9.66 Transcript Type= protein_coding chr5 176346065 176361807 176346065 176361807 - ENST00000620366.4@KIAA1191 ENST00000620366.4 protein_coding 176361602,176352622,176350613,176348250,176347921,176346065 176361807,176352748,176350737,176348356,176348063,176347808 Gene ID= ENSG00000122203.14 TPM= 4.53 Transcript Type= protein_coding chr5 176346062 176361739 176346062 176361739 - ENST00000393728.6@KIAA1191 ENST00000393728.6 protein_coding 176361602,176359811,176348250,176347921,176346062 176361739,176359918,176348356,176348063,176347808 Gene ID= ENSG00000122203.14 TPM= 2.72 Transcript Type= processed_transcript chr5 176383946 176388975 176383946 176388975 - ENST00000614830.4@NOP16 ENST00000614830.4 protein_coding 176388433,176388235,176386840,176385221,176383946 176388975,176388343,176386909,176385327,176384374 Gene ID= ENSG00000048162.20 TPM= 15.39 Transcript Type= protein_coding chr5 176388747 176389771 176388747 176389771 + ENST00000274787.2@HIGD2A ENST00000274787.2 protein_coding 176388747,176389331 176388973,176389771 Gene ID= ENSG00000146066.2 TPM= 143.08 Transcript Type= protein_coding chr5 176392455 176416569 176392455 176416569 - ENST00000345807.6@CLTB ENST00000345807.6 protein_coding 176416177,176410257,176397930,176397607,176392455 176416569,176410303,176398047,176397718,176392945 Gene ID= ENSG00000175416.12 TPM= 269.55 Transcript Type= protein_coding chr5 176392455 176416569 176392455 176416569 - ENST00000310418.8@CLTB ENST00000310418.8 protein_coding 176416177,176410257,176397930,176397607,176396479,176392455 176416569,176410303,176398047,176397718,176396532,176392945 Gene ID= ENSG00000175416.12 TPM= 4.23 Transcript Type= protein_coding chr5 176448355 176510074 176448355 176510074 + ENST00000261942.6@FAF2 ENST00000261942.6 protein_coding 176448355,176479188,176486355,176488951,176492194,176493999,176494184,176496486,176498914,176500003,176506768 176448470,176479256,176486489,176489027,176492332,176494084,176494275,176496663,176499085,176500146,176510074 Gene ID= ENSG00000113194.12 TPM= 57.05 Transcript Type= protein_coding chr5 176647403 176659056 176647403 176659056 + transcript2850.chr5.nic@TSPAN17 transcript2850.chr5.nic protein_coding 176647403,176651616,176651754,176652743,176654895,176656078,176656700,176656895 176647702,176651666,176651900,176652913,176655020,176656125,176656816,176659056 Gene ID= ENSG00000048140.17 TPM= 18.34 Transcript Type= NA chr5 176647484 176659056 176647484 176659056 + transcript2856.chr5.nic@TSPAN17 transcript2856.chr5.nic protein_coding 176647484,176651616,176651754,176652743,176654895,176656078,176656700 176647702,176651666,176651900,176652913,176655020,176656125,176659056 Gene ID= ENSG00000048140.17 TPM= 5.66 Transcript Type= NA chr5 176647387 176659020 176647387 176659020 + ENST00000310032.12@TSPAN17 ENST00000310032.12 protein_coding 176647387,176651616,176651754,176652743,176654895,176656078,176656700,176656895,176657518 176647702,176651666,176651900,176652913,176655020,176656134,176656816,176656956,176659020 Gene ID= ENSG00000048140.17 TPM= 3.62 Transcript Type= protein_coding chr5 176647502 176659051 176647502 176659051 + ENST00000508164.5@TSPAN17 ENST00000508164.5 protein_coding 176647502,176651616,176651754,176652743,176654895,176656078,176656700,176656895,176657518 176647702,176651666,176651900,176652913,176655020,176656125,176656816,176656956,176659051 Gene ID= ENSG00000048140.17 TPM= 76.29 Transcript Type= protein_coding chr5 176880779 176899385 176880779 176899385 - transcript2871.chr5.nnic@HK3 transcript2871.chr5.nnic protein_coding 176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880779 176899385,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881750,176881535,176881217 Gene ID= ENSG00000160883.10 TPM= 7.24 Transcript Type= NA chr5 176880865 176899385 176880865 176899385 - transcript2874.chr5.nic@HK3 transcript2874.chr5.nic protein_coding 176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880865 176899385,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217 Gene ID= ENSG00000160883.10 TPM= 31.54 Transcript Type= NA chr5 176880871 176899332 176880871 176899332 - ENST00000292432.9@HK3 ENST00000292432.9 protein_coding 176899267,176896064,176891388,176891037,176890822,176890635,176889645,176889381,176888709,176888332,176887451,176887201,176887002,176884039,176883770,176881944,176881692,176881302,176880871 176899332,176896185,176891550,176891191,176890941,176890730,176889744,176889564,176888864,176888565,176887746,176887337,176887121,176884134,176883869,176882127,176881847,176881535,176881217 Gene ID= ENSG00000160883.10 TPM= 38.78 Transcript Type= protein_coding chr5 176905036 177006444 176905036 177006444 - transcript2887.chr5.nnic@UIMC1 transcript2887.chr5.nnic protein_coding 177006284,176982469,176975396,176974896,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905036 177006444,176982623,176975480,176974980,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 1.81 Transcript Type= NA chr5 176905036 177006775 176905036 177006775 - transcript2893.chr5.nic@UIMC1 transcript2893.chr5.nic protein_coding 177006539,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905036 177006775,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 10.19 Transcript Type= NA chr5 176905031 177022639 176905031 177022639 - transcript2895.chr5.nic@UIMC1 transcript2895.chr5.nic protein_coding 177022464,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905031 177022639,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 2.94 Transcript Type= NA chr5 176905038 177006775 176905038 177006775 - transcript2900.chr5.nic@UIMC1 transcript2900.chr5.nic protein_coding 177006539,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905038 177006775,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 1.81 Transcript Type= NA chr5 176905052 177006779 176905052 177006779 - transcript2901.chr5.nic@UIMC1 transcript2901.chr5.nic protein_coding 177006650,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905052 177006779,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 1.81 Transcript Type= NA chr5 176905037 177022639 176905037 177022639 - transcript2902.chr5.nic@UIMC1 transcript2902.chr5.nic protein_coding 177022464,176982469,176975396,176970742,176969601,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905037 177022639,176982623,176975480,176970866,176969706,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 1.81 Transcript Type= NA chr5 176905050 177006751 176905050 177006751 - ENST00000511320.5@UIMC1 ENST00000511320.5 protein_coding 177006650,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905050 177006751,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 8.38 Transcript Type= protein_coding chr5 176905005 177006408 176905005 177006408 - ENST00000377227.8@UIMC1 ENST00000377227.8 protein_coding 177006284,176982469,176975396,176970742,176969601,176968555,176958093,176955959,176951474,176943335,176911311,176908523,176907114,176906011,176905005 177006408,176982623,176975480,176970866,176969706,176969291,176958154,176956035,176951577,176943488,176911389,176908694,176907177,176906047,176905492 Gene ID= ENSG00000087206.16 TPM= 4.75 Transcript Type= protein_coding chr5 177022696 177065985 177022696 177065985 + ENST00000358149.7@ZNF346 ENST00000358149.7 protein_coding 177022696,177041126,177041778,177044389,177050751,177062058,177064512 177022913,177041229,177041870,177044533,177050936,177062151,177065985 Gene ID= ENSG00000113761.11 TPM= 5.43 Transcript Type= protein_coding chr5 177022694 177065980 177022694 177065980 + transcript2911.chr5.nnic@ZNF346 transcript2911.chr5.nnic protein_coding 177022694,177041126,177041778,177044389,177062058,177064512 177022913,177041229,177041870,177044533,177062151,177065980 Gene ID= ENSG00000113761.11 TPM= 2.72 Transcript Type= NA chr5 177086873 177098154 177086873 177098154 + transcript2917.chr5.nic@FGFR4 transcript2917.chr5.nic protein_coding 177086873,177089550,177090390,177090745,177090938,177091685,177092321,177092646,177093138,177093406,177093654,177095330,177095533,177096057,177096287,177096604,177097292,177097527 177087018,177089693,177090653,177090825,177091104,177091808,177092511,177092784,177093331,177093551,177093775,177095440,177095723,177096179,177096357,177096741,177097397,177098154 Gene ID= ENSG00000160867.14 TPM= 4.53 Transcript Type= NA chr5 177086853 177098154 177086853 177098154 + transcript2920.chr5.nic@FGFR4 transcript2920.chr5.nic protein_coding 177086853,177089550,177090390,177090745,177091685,177092321,177092646,177093138,177093406,177093654,177095330,177095533,177096057,177096287,177096604,177097292,177097527 177087033,177089693,177090653,177091104,177091808,177092511,177092784,177093331,177093551,177093775,177095440,177095723,177096179,177096357,177096741,177097397,177098154 Gene ID= ENSG00000160867.14 TPM= 1.81 Transcript Type= NA chr5 177086886 177098144 177086886 177098144 + ENST00000292408.8@FGFR4 ENST00000292408.8 protein_coding 177086886,177089550,177090390,177090745,177090938,177091685,177092321,177092646,177093138,177093406,177093654,177095330,177095533,177096057,177096287,177096604,177097292,177097527 177087077,177089693,177090653,177090825,177091104,177091808,177092511,177092784,177093331,177093551,177093775,177095440,177095723,177096179,177096357,177096741,177097397,177098144 Gene ID= ENSG00000160867.14 TPM= 19.02 Transcript Type= protein_coding chr5 177301197 177303741 177301197 177303741 - transcript2932.chr5.nic@RAB24 transcript2932.chr5.nic protein_coding 177303407,177303172,177303009,177302752,177302577,177302128,177301925,177301197 177303741,177303320,177303077,177302830,177302644,177302496,177301987,177301807 Gene ID= ENSG00000169228.13 TPM= 16.48 Transcript Type= NA chr5 177301198 177303733 177301198 177303733 - ENST00000478234.5@RAB24 ENST00000478234.5 protein_coding 177303172,177303009,177302752,177302577,177302128,177301925,177301198 177303733,177303077,177302830,177302644,177302496,177301987,177301807 Gene ID= ENSG00000169228.13 TPM= 29.16 Transcript Type= retained_intron chr5 177301464 177303708 177301464 177303708 - ENST00000303251.10@RAB24 ENST00000303251.10 protein_coding 177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301464 177303708,177303077,177302830,177302644,177302496,177302178,177301987,177301807 Gene ID= ENSG00000169228.13 TPM= 39.12 Transcript Type= protein_coding chr5 177301451 177303706 177301451 177303706 - ENST00000393611.6@RAB24 ENST00000393611.6 protein_coding 177303407,177303172,177303009,177302752,177302577,177302397,177302128,177301925,177301451 177303706,177303320,177303077,177302830,177302644,177302496,177302178,177301987,177301807 Gene ID= ENSG00000169228.13 TPM= 18.29 Transcript Type= protein_coding chr5 177301452 177303681 177301452 177303681 - ENST00000495458.5@RAB24 ENST00000495458.5 protein_coding 177303009,177302752,177302577,177302128,177301925,177301452 177303681,177302830,177302644,177302496,177301987,177301807 Gene ID= ENSG00000169228.13 TPM= 1.09 Transcript Type= retained_intron chr5 177303774 177306959 177303774 177306959 + ENST00000303204.8@PRELID1 ENST00000303204.8 protein_coding 177303774,177304625,177305871,177306098,177306422 177304077,177304850,177305984,177306176,177306959 Gene ID= ENSG00000169230.9 TPM= 238.16 Transcript Type= protein_coding chr5 177331558 177351676 177331558 177351676 - transcript2947.chr5.nnic@LMAN2 transcript2947.chr5.nnic protein_coding 177351623,177351452,177351173,177338488,177337706,177337363,177337136,177334284,177331558 177351676,177351563,177351291,177338605,177337785,177337524,177337250,177334403,177332246 Gene ID= ENSG00000169223.14 TPM= 28.07 Transcript Type= NA chr5 177331562 177351852 177331562 177351852 - ENST00000303127.11@LMAN2 ENST00000303127.11 protein_coding 177351452,177351173,177338488,177337706,177337363,177337136,177334284,177331562 177351852,177351291,177338605,177337785,177337524,177337250,177334403,177332246 Gene ID= ENSG00000169223.14 TPM= 327.81 Transcript Type= protein_coding chr5 177357837 177372601 177357837 177372601 + ENST00000408923.7@RGS14 ENST00000408923.7 protein_coding 177357837,177365963,177366177,177366708,177366891,177367414,177367714,177368157,177368717,177370591,177370905,177371165,177371350,177371475,177371873 177358069,177365984,177366355,177366800,177367034,177367557,177367825,177368266,177368920,177370664,177371031,177371246,177371396,177371589,177372601 Gene ID= ENSG00000169220.17 TPM= 3.92 Transcript Type= protein_coding chr5 177367299 177372600 177367299 177372600 + transcript2964.chr5.nic@RGS14 transcript2964.chr5.nic protein_coding 177367299,177367714,177368157,177368717,177370588,177370905,177371165,177371350,177371475,177371873 177367557,177367825,177368266,177368920,177370664,177371031,177371246,177371396,177371589,177372600 Gene ID= ENSG00000169220.17 TPM= 12.07 Transcript Type= NA chr5 177367314 177372596 177367314 177372596 + ENST00000425155.6@RGS14 ENST00000425155.6 protein_coding 177367314,177368717,177370588,177370905,177371165,177371350,177371475,177371873 177368266,177368920,177370664,177371031,177371246,177371396,177371589,177372596 Gene ID= ENSG00000169220.17 TPM= 1.2 Transcript Type= retained_intron chr5 177426649 177442620 177426649 177442620 + transcript2979.chr5.nic@GRK6 transcript2979.chr5.nic protein_coding 177426649,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919 177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177442620 Gene ID= ENSG00000198055.10 TPM= 2.72 Transcript Type= NA chr5 177426678 177442830 177426678 177442830 + ENST00000355472.9@GRK6 ENST00000355472.9 protein_coding 177426678,177430872,177431995,177432233,177432706,177433147,177433347,177433536,177433914,177434902,177435032,177436073,177436393,177440700,177440919,177441737 177426897,177430967,177432107,177432310,177432806,177433239,177433410,177433676,177434104,177434939,177435121,177436281,177436530,177440837,177441053,177442830 Gene ID= ENSG00000198055.10 TPM= 80.29 Transcript Type= protein_coding chr5 177446827 177456268 177446827 177456268 + ENST00000502922.5@PRR7 ENST00000502922.5 protein_coding 177446827,177454829,177455724 177446960,177455494,177456268 Gene ID= ENSG00000131188.11 TPM= 11.77 Transcript Type= protein_coding chr5 177456608 177473741 177456608 177473741 - ENST00000309007.9@DBN1 ENST00000309007.9 protein_coding 177473436,177468844,177468108,177467743,177467481,177467255,177466911,177466772,177460644,177460432,177459098,177458058,177457655,177456608 177473741,177468899,177468220,177467817,177467627,177467332,177467062,177466835,177460703,177460555,177459268,177458707,177457757,177457503 Gene ID= ENSG00000113758.13 TPM= 42.56 Transcript Type= protein_coding chr5 177483391 177497617 177483391 177497617 - transcript2995.chr5.nic@PDLIM7 transcript2995.chr5.nic protein_coding 177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483391 177497617,177496523,177492677,177492435,177491925,177491146,177490906,177490593,177489627,177488248,177484190,177483982,177483730 Gene ID= ENSG00000196923.13 TPM= 3.98 Transcript Type= NA chr5 177483391 177497617 177483391 177497617 - transcript2996.chr5.nic@PDLIM7 transcript2996.chr5.nic protein_coding 177497528,177496417,177492526,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483391 177497617,177496523,177492677,177492435,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730 Gene ID= ENSG00000196923.13 TPM= 5.19 Transcript Type= NA chr5 177483391 177497617 177483391 177497617 - transcript2998.chr5.nic@PDLIM7 transcript2998.chr5.nic protein_coding 177497528,177496417,177492526,177492405,177491807,177491010,177489771,177489393,177488068,177484070,177483867,177483391 177497617,177496523,177492677,177492435,177491925,177491420,177490906,177489627,177488248,177484190,177483982,177483730 Gene ID= ENSG00000196923.13 TPM= 3.08 Transcript Type= NA chr5 177483391 177497617 177483391 177497617 - transcript3000.chr5.nic@PDLIM7 transcript3000.chr5.nic protein_coding 177497528,177496417,177492526,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483391 177497617,177496523,177492677,177492435,177490906,177489832,177489627,177488248,177484190,177483982,177483730 Gene ID= ENSG00000196923.13 TPM= 2.17 Transcript Type= NA chr5 177483396 177497583 177483396 177497583 - ENST00000355841.6@PDLIM7 ENST00000355841.6 protein_coding 177497528,177496417,177492526,177492405,177491807,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483396 177497583,177496523,177492677,177492435,177491925,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730 Gene ID= ENSG00000196923.13 TPM= 50.1 Transcript Type= protein_coding chr5 177483394 177497561 177483394 177497561 - ENST00000359895.6@PDLIM7 ENST00000359895.6 protein_coding 177497528,177496417,177492526,177492405,177491404,177491010,177490870,177489771,177489393,177488068,177484070,177483867,177483394 177497561,177496523,177492677,177492435,177491420,177491146,177490906,177489832,177489627,177488248,177484190,177483982,177483730 Gene ID= ENSG00000196923.13 TPM= 7 Transcript Type= protein_coding chr5 177490246 177497573 177490246 177497573 - ENST00000355572.6@PDLIM7 ENST00000355572.6 protein_coding 177497528,177496417,177492526,177492405,177491807,177491010,177490870,177490246 177497573,177496523,177492677,177492435,177491925,177491146,177490906,177490593 Gene ID= ENSG00000196923.13 TPM= 6.34 Transcript Type= protein_coding chr5 177501932 177509871 177501932 177509871 - transcript3003.chr5.nic@DOK3 transcript3003.chr5.nic protein_coding 177509758,177509475,177508237,177505011,177504743,177501932 177509871,177509657,177508542,177505110,177504915,177504660 Gene ID= ENSG00000146094.13 TPM= 3.62 Transcript Type= NA chr5 177503750 177509857 177503750 177509857 - ENST00000357198.8@DOK3 ENST00000357198.8 protein_coding 177509802,177509475,177508237,177505011,177504743,177503750 177509857,177509657,177508542,177505110,177504915,177504660 Gene ID= ENSG00000146094.13 TPM= 1.81 Transcript Type= protein_coding chr5 177511577 177517469 177511577 177517469 - ENST00000507955.5@DDX41 ENST00000507955.5 protein_coding 177516919,177516725,177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511577 177517469,177516835,177516447,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927 Gene ID= ENSG00000183258.11 TPM= 57.95 Transcript Type= protein_coding chr5 177511575 177516722 177511575 177516722 - transcript3015.chr5.nic@DDX41 transcript3015.chr5.nic protein_coding 177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511575 177516722,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927 Gene ID= ENSG00000183258.11 TPM= 6.34 Transcript Type= NA chr5 177511577 177516916 177511577 177516916 - ENST00000330503.11@DDX41 ENST00000330503.11 protein_coding 177516725,177516288,177516119,177515929,177515685,177515186,177514916,177514701,177513685,177513353,177513011,177512780,177512496,177512322,177512096,177511577 177516916,177516447,177516193,177515989,177515821,177515258,177515069,177514837,177513847,177513484,177513082,177512876,177512645,177512393,177512206,177511927 Gene ID= ENSG00000183258.11 TPM= 6.34 Transcript Type= protein_coding chr5 177519788 177554584 177519788 177554584 - transcript3030.chr5.nic@FAM193B transcript3030.chr5.nic protein_coding 177553168,177538905,177537873,177536358,177532443,177531953,177531282,177524185,177523957,177521974,177519788 177554584,177539147,177538107,177536745,177532641,177532200,177531521,177525205,177524032,177522071,177520181 Gene ID= ENSG00000146067.15 TPM= 2.9 Transcript Type= NA chr5 177519788 177554583 177519788 177554583 - transcript3034.chr5.nic@FAM193B transcript3034.chr5.nic protein_coding 177554249,177553168,177538905,177537873,177536358,177532443,177531282,177524185,177523957,177521974,177519788 177554583,177553802,177539147,177538107,177536745,177532641,177531521,177525205,177524032,177522071,177520181 Gene ID= ENSG00000146067.15 TPM= 2.6 Transcript Type= NA chr5 177519788 177554583 177519788 177554583 - transcript3039.chr5.nnic@FAM193B transcript3039.chr5.nnic protein_coding 177554249,177538905,177537873,177536358,177532443,177531282,177524185,177523957,177521974,177519788 177554583,177539042,177538107,177536745,177532641,177531521,177525205,177524032,177522071,177520181 Gene ID= ENSG00000146067.15 TPM= 2.6 Transcript Type= NA chr5 177519788 177554584 177519788 177554584 - transcript3041.chr5.nic@FAM193B transcript3041.chr5.nic protein_coding 177554249,177538905,177537873,177536358,177532443,177531282,177524185,177523957,177521974,177519788 177554584,177539147,177538107,177536745,177532641,177531521,177525205,177524032,177522071,177520181 Gene ID= ENSG00000146067.15 TPM= 13.47 Transcript Type= NA chr5 177519788 177554507 177519788 177554507 - ENST00000514747.5@FAM193B ENST00000514747.5 protein_coding 177554249,177538905,177537873,177536358,177532443,177524185,177523957,177521974,177519788 177554507,177539147,177538107,177536745,177532641,177525205,177524032,177522071,177520181 Gene ID= ENSG00000146067.15 TPM= 1.09 Transcript Type= protein_coding chr5 177592158 177596124 177592158 177596124 + ENST00000332598.6@TMED9 ENST00000332598.6 protein_coding 177592158,177592575,177593650,177594139,177595267 177592398,177592675,177593775,177594285,177596124 Gene ID= ENSG00000184840.11 TPM= 114.1 Transcript Type= protein_coding chr5 177600120 177606185 177600120 177606185 + transcript3065.chr5.nic@B4GALT7 transcript3065.chr5.nic protein_coding 177600120,177604179,177605045 177600260,177604541,177606185 Gene ID= ENSG00000027847.13 TPM= 12.68 Transcript Type= NA chr5 177600100 177610347 177600100 177610347 + ENST00000029410.9@B4GALT7 ENST00000029410.9 protein_coding 177600100,177604179,177607302,177608539,177608910,177609540 177600260,177604541,177607527,177608622,177609014,177610347 Gene ID= ENSG00000027847.13 TPM= 89.65 Transcript Type= protein_coding chr5 178131011 178150567 178131011 178150567 + transcript3090.chr5.nic@RMND5B transcript3090.chr5.nic protein_coding 178131011,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969 178131054,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178150567 Gene ID= ENSG00000145916.18 TPM= 17.41 Transcript Type= NA chr5 178131017 178150565 178131017 178150565 + transcript3091.chr5.nic@RMND5B transcript3091.chr5.nic protein_coding 178131017,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969 178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178150565 Gene ID= ENSG00000145916.18 TPM= 18.32 Transcript Type= NA chr5 178131017 178150565 178131017 178150565 + transcript3093.chr5.nic@RMND5B transcript3093.chr5.nic protein_coding 178131017,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969 178131376,178138396,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178150565 Gene ID= ENSG00000145916.18 TPM= 5.04 Transcript Type= NA chr5 178130996 178148568 178130996 178148568 + ENST00000313386.8@RMND5B ENST00000313386.8 protein_coding 178130996,178131237,178138108,178142583,178142852,178143627,178143942,178146114,178147533,178147729,178147969 178131054,178131376,178138258,178142728,178142992,178143727,178144108,178146279,178147635,178147883,178148568 Gene ID= ENSG00000145916.18 TPM= 36.97 Transcript Type= protein_coding chr5 178149460 178153967 178149460 178153967 - ENST00000274606.7@NHP2 ENST00000274606.7 protein_coding 178153658,178153491,178150888,178149460 178153967,178153560,178150993,178149838 Gene ID= ENSG00000145912.8 TPM= 92.37 Transcript Type= protein_coding chr5 178149482 178153829 178149482 178153829 - ENST00000314397.8@NHP2 ENST00000314397.8 protein_coding 178153658,178153491,178149482 178153829,178153560,178149838 Gene ID= ENSG00000145912.8 TPM= 2.72 Transcript Type= protein_coding chr5 178204507 178211163 178204507 178211163 + ENST00000358344.7@HNRNPAB ENST00000358344.7 protein_coding 178204507,178204815,178205842,178206732,178207094,178209330,178210132,178210553 178204740,178205046,178206010,178206890,178207225,178209447,178210272,178211163 Gene ID= ENSG00000197451.11 TPM= 27.17 Transcript Type= protein_coding chr5 178204548 178211149 178204548 178211149 + ENST00000506259.5@HNRNPAB ENST00000506259.5 protein_coding 178204548,178205842,178206732,178207094,178209330,178210553 178205046,178206010,178206890,178207225,178209447,178211149 Gene ID= ENSG00000197451.11 TPM= 3.62 Transcript Type= protein_coding chr5 178204539 178211142 178204539 178211142 + ENST00000355836.9@HNRNPAB ENST00000355836.9 protein_coding 178204539,178204815,178205842,178206732,178207094,178209330,178210553 178204740,178205046,178206010,178206890,178207225,178209447,178211142 Gene ID= ENSG00000197451.11 TPM= 11.77 Transcript Type= protein_coding chr5 178204571 178211142 178204571 178211142 + ENST00000504898.5@HNRNPAB ENST00000504898.5 protein_coding 178204571,178205842,178206732,178207094,178209330,178210132,178210553 178205046,178206010,178206890,178207225,178209447,178210272,178211142 Gene ID= ENSG00000197451.11 TPM= 3.62 Transcript Type= protein_coding chr5 178208584 178232802 178208584 178232802 - transcript3100.chr5.nic@PHYKPL transcript3100.chr5.nic protein_coding 178232492,178231669,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208584 178232802,178231866,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915 Gene ID= ENSG00000175309.14 TPM= 3.05 Transcript Type= NA chr5 178208584 178232852 178208584 178232852 - transcript3114.chr5.nic@PHYKPL transcript3114.chr5.nic protein_coding 178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208584 178232852,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915 Gene ID= ENSG00000175309.14 TPM= 8.48 Transcript Type= NA chr5 178208472 178232854 178208472 178232854 - transcript3116.chr5.nic@PHYKPL transcript3116.chr5.nic protein_coding 178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178211890,178208472 178232854,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178211970,178208915 Gene ID= ENSG00000175309.14 TPM= 1.97 Transcript Type= NA chr5 178208584 178232800 178208584 178232800 - transcript3121.chr5.nic@PHYKPL transcript3121.chr5.nic protein_coding 178231405,178229940,178225355,178222852,178222355,178215276,178214796,178212973,178211890,178208584 178232800,178230099,178225429,178224729,178222580,178215430,178214885,178213103,178211970,178208915 Gene ID= ENSG00000175309.14 TPM= 3.05 Transcript Type= NA chr5 178208497 178232785 178208497 178232785 - ENST00000308158.9@PHYKPL ENST00000308158.9 protein_coding 178232492,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208497 178232785,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915 Gene ID= ENSG00000175309.14 TPM= 38.37 Transcript Type= protein_coding chr5 178208584 178232791 178208584 178232791 - ENST00000489262.5@PHYKPL ENST00000489262.5 protein_coding 178231669,178231405,178229940,178225355,178224642,178224448,178222852,178222355,178215276,178214796,178212973,178211890,178208584 178232791,178231523,178230099,178225429,178224729,178224564,178222934,178222580,178215430,178214885,178213103,178211970,178208915 Gene ID= ENSG00000175309.14 TPM= 1.24 Transcript Type= retained_intron chr5 178237618 178590555 178237618 178590555 - ENST00000390654.7@COL23A1 ENST00000390654.7 protein_coding 178589904,178560682,178306875,178290362,178288324,178270337,178268730,178267307,178263208,178262217,178261722,178259721,178257523,178256866,178256353,178254949,178252544,178250061,178249117,178248192,178247775,178247526,178246391,178246254,178245942,178242341,178242042,178239141,178237618 178590555,178560748,178306919,178290369,178288350,178270363,178268756,178267333,178263324,178262252,178261748,178259747,178257567,178256928,178256397,178255026,178252597,178250105,178249206,178248254,178247831,178247552,178246453,178246307,178245968,178242394,178242128,178239179,178238700 Gene ID= ENSG00000050767.15 TPM= 1.81 Transcript Type= protein_coding chr5 178602664 178627114 178602664 178627114 - ENST00000316308.8@CLK4 ENST00000316308.8 protein_coding 178626946,178623256,178618556,178617344,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602664 178627114,178623416,178618778,178617434,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757 Gene ID= ENSG00000113240.12 TPM= 3.92 Transcript Type= protein_coding chr5 178602663 178627075 178602663 178627075 - transcript3143.chr5.nic@CLK4 transcript3143.chr5.nic protein_coding 178626946,178623256,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602663 178627075,178623416,178618778,178616948,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757 Gene ID= ENSG00000113240.12 TPM= 2.11 Transcript Type= NA chr5 178602663 178627075 178602663 178627075 - transcript3144.chr5.nic@CLK4 transcript3144.chr5.nic protein_coding 178626946,178623256,178618556,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178602663 178627075,178623416,178618778,178617434,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757 Gene ID= ENSG00000113240.12 TPM= 2.11 Transcript Type= NA chr5 178603274 178627075 178603274 178627075 - transcript3145.chr5.nic@CLK4 transcript3145.chr5.nic protein_coding 178626946,178623256,178616882,178613727,178613473,178612796,178612416,178608376,178605303,178603844,178603274 178627075,178623416,178618778,178613843,178613639,178612890,178612545,178608458,178605382,178603934,178603757 Gene ID= ENSG00000113240.12 TPM= 1.81 Transcript Type= NA chr5 178711592 178730702 178711592 178730702 - ENST00000335815.6@ZNF354A ENST00000335815.6 protein_coding 178730556,178728990,178726999,178725376,178711592 178730702,178729073,178727125,178725471,178713621 Gene ID= ENSG00000169131.11 TPM= 2.72 Transcript Type= protein_coding chr5 178859911 178889446 178859911 178889446 + transcript3152.chr5.nnic@ZNF354B transcript3152.chr5.nnic protein_coding 178859911,178866244,178866976,178882709,178885614,178887621 178861080,178866370,178867071,178884518,178885733,178889446 Gene ID= ENSG00000178338.10 TPM= 3.62 Transcript Type= NA chr5 179023752 179035064 179023752 179035064 + ENST00000444149.6@ZNF879 ENST00000444149.6 protein_coding 179023752,179024970,179027473,179028032,179032205 179023904,179025037,179027599,179028127,179035064 Gene ID= ENSG00000234284.6 TPM= 7.24 Transcript Type= protein_coding chr5 179060415 179083537 179060415 179083537 + ENST00000315475.6@ZNF354C ENST00000315475.6 protein_coding 179060415,179062015,179076445,179077071,179078683 179060666,179062095,179076571,179077166,179083537 Gene ID= ENSG00000177932.6 TPM= 3.62 Transcript Type= protein_coding chr5 179120158 179345500 179120158 179345500 - transcript3166.chr5.nic@ADAMTS2 transcript3166.chr5.nic protein_coding 179345190,179343767,179272911,179207513,179181072,179158723,179154814,179154049,179153491,179152142,179139890,179137769,179135909,179132777,179132230,179129932,179127959,179125998,179124973,179122644,179120158 179345500,179344161,179273064,179207715,179181155,179158879,179154919,179154192,179153623,179152255,179140035,179137944,179136042,179132900,179132310,179130098,179128118,179126130,179125180,179122773,179121750 Gene ID= ENSG00000087116.14 TPM= 15.39 Transcript Type= NA chr5 179110851 179345430 179110851 179345430 - ENST00000251582.11@ADAMTS2 ENST00000251582.11 protein_coding 179345190,179343767,179272911,179207513,179181072,179158723,179154814,179154049,179153491,179152142,179139890,179137769,179135909,179132777,179132230,179129932,179127959,179125998,179124973,179122644,179121661,179110851 179345430,179344161,179273064,179207715,179181155,179158879,179154919,179154192,179153623,179152255,179140035,179137944,179136042,179132900,179132310,179130098,179128118,179126130,179125180,179122773,179121750,179114324 Gene ID= ENSG00000087116.14 TPM= 19.02 Transcript Type= protein_coding chr5 179150888 179345430 179150888 179345430 - ENST00000274609.5@ADAMTS2 ENST00000274609.5 protein_coding 179345190,179343767,179272911,179207513,179181072,179158723,179154814,179154049,179153491,179152142,179150888 179345430,179344161,179273064,179207715,179181155,179158879,179154919,179154192,179153623,179152255,179151200 Gene ID= ENSG00000087116.14 TPM= 6.34 Transcript Type= protein_coding chr5 179550558 179610026 179550558 179610026 + ENST00000319449.8@RUFY1 ENST00000319449.8 protein_coding 179550558,179560025,179562547,179567461,179569302,179577075,179580947,179585796,179589546,179591625,179593478,179594866,179596562,179598692,179601892,179605876,179607582,179609376 179550879,179560198,179562664,179567562,179569425,179577136,179581012,179585865,179589647,179591741,179593645,179594963,179596681,179598821,179601986,179605924,179607659,179610026 Gene ID= ENSG00000176783.14 TPM= 108.89 Transcript Type= protein_coding chr5 179614178 179623710 179614178 179623710 - ENST00000393432.8@HNRNPH1 ENST00000393432.8 protein_coding 179623595,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614178 179623710,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959 Gene ID= ENSG00000169045.17 TPM= 14.26 Transcript Type= protein_coding chr5 179614179 179623721 179614179 179623721 - ENST00000442819.6@HNRNPH1 ENST00000442819.6 protein_coding 179623636,179623037,179621242,179620892,179619269,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614179 179623721,179623164,179621397,179621035,179619407,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959 Gene ID= ENSG00000169045.17 TPM= 19.7 Transcript Type= protein_coding chr5 179614179 179623689 179614179 179623689 - transcript3196.chr5.nic@HNRNPH1 transcript3196.chr5.nic protein_coding 179623595,179623037,179621242,179620892,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614179 179623689,179623164,179621397,179621035,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959 Gene ID= ENSG00000169045.17 TPM= 15.62 Transcript Type= NA chr5 179614179 179623710 179614179 179623710 - transcript3197.chr5.nic@HNRNPH1 transcript3197.chr5.nic protein_coding 179623636,179623037,179621242,179620892,179618145,179617989,179617799,179617514,179617051,179616869,179616126,179615546,179614179 179623710,179623164,179621397,179621035,179618323,179618060,179617932,179617649,179617110,179616958,179616218,179615595,179614959 Gene ID= ENSG00000169045.17 TPM= 15.62 Transcript Type= NA chr5 179615357 179618522 179615357 179618522 - transcript3202.chr5.nic@HNRNPH1 transcript3202.chr5.nic protein_coding 179618145,179617799,179617514,179615357 179618522,179618060,179617649,179617110 Gene ID= ENSG00000169045.17 TPM= 2.72 Transcript Type= NA chr5 179698906 179730925 179698906 179730925 + ENST00000247461.8@CANX ENST00000247461.8 protein_coding 179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591 179699102,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925 Gene ID= ENSG00000127022.14 TPM= 480.78 Transcript Type= protein_coding chr5 179698906 179730925 179698906 179730925 + ENST00000452673.6@CANX ENST00000452673.6 protein_coding 179698906,179705679,179706258,179707132,179708239,179708978,179709873,179716105,179719668,179720404,179722804,179723660,179724657,179726680,179728591 179699049,179705852,179706331,179707190,179708380,179709059,179710065,179716294,179719781,179720560,179723019,179723779,179724783,179726759,179730925 Gene ID= ENSG00000127022.14 TPM= 37.97 Transcript Type= protein_coding chr5 179732850 179777286 179732850 179777286 + ENST00000292599.3@MAML1 ENST00000292599.3 protein_coding 179732850,179765326,179768850,179771147,179773895 179733427,179766741,179769089,179771243,179777286 Gene ID= ENSG00000161021.12 TPM= 10.87 Transcript Type= protein_coding chr5 179795454 179796512 179795454 179796512 + transcript3274.chr5.nic@LTC4S transcript3274.chr5.nic protein_coding 179795454,179795786,179795941,179796253 179795683,179795856,179796022,179796512 Gene ID= ENSG00000213316.9 TPM= 7.24 Transcript Type= NA chr5 179795454 179796511 179795454 179796511 + transcript3277.chr5.nic@LTC4S transcript3277.chr5.nic protein_coding 179795454,179795786,179795941 179795683,179795856,179796511 Gene ID= ENSG00000213316.9 TPM= 1.81 Transcript Type= NA chr5 179793986 179796512 179793986 179796512 + ENST00000292596.14@LTC4S ENST00000292596.14 protein_coding 179793986,179795584,179795786,179795941,179796253 179794138,179795683,179795856,179796022,179796512 Gene ID= ENSG00000213316.9 TPM= 10.87 Transcript Type= protein_coding chr5 179797593 179806948 179797593 179806948 - transcript3229.chr5.nnic@MGAT4B transcript3229.chr5.nnic protein_coding 179806694,179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797593 179806948,179806628,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068 Gene ID= ENSG00000161013.16 TPM= 9.16 Transcript Type= NA chr5 179797597 179806934 179797597 179806934 - ENST00000292591.11@MGAT4B ENST00000292591.11 protein_coding 179806487,179801784,179801554,179801334,179800907,179800484,179800184,179799954,179799506,179799203,179798928,179798513,179798347,179798165,179797597 179806934,179801969,179801694,179801467,179800953,179800597,179800259,179800068,179799636,179799310,179799121,179798591,179798434,179798277,179798068 Gene ID= ENSG00000161013.16 TPM= 225.59 Transcript Type= protein_coding chr5 179820759 179838078 179820759 179838078 + ENST00000389805.8@SQSTM1 ENST00000389805.8 protein_coding 179820759,179822958,179823858,179824182,179825146,179833032,179833587,179836436 179821141,179823053,179824087,179824323,179825226,179833246,179833782,179838078 Gene ID= ENSG00000161011.19 TPM= 982.97 Transcript Type= protein_coding chr5 179806398 179813024 179806398 179813024 + ENST00000506042.5@SQSTM1 ENST00000506042.5 protein_coding 179806398,179811574,179812407 179806591,179811682,179813024 Gene ID= ENSG00000161011.19 TPM= 1.81 Transcript Type= processed_transcript chr5 179837266 179858808 179837266 179858808 - ENST00000376931.6@MRNIP ENST00000376931.6 protein_coding 179858731,179853378,179841907,179840872,179837266 179858808,179853437,179842064,179840959,179837885 Gene ID= ENSG00000161010.14 TPM= 2.72 Transcript Type= protein_coding chr5 179862066 179907856 179862066 179907856 - ENST00000355235.7@TBC1D9B ENST00000355235.7 protein_coding 179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179865838,179865254,179862066 179907856,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179865888,179865360,179864128 Gene ID= ENSG00000197226.12 TPM= 335.21 Transcript Type= protein_coding chr5 179862066 179907859 179862066 179907859 - ENST00000356834.7@TBC1D9B ENST00000356834.7 protein_coding 179907704,179904702,179899189,179894386,179893209,179891379,179888103,179879628,179879047,179878309,179875920,179874902,179873119,179872892,179871462,179870255,179869769,179867778,179867445,179865838,179865254,179862066 179907859,179904812,179899307,179894614,179893467,179891586,179888312,179879789,179879197,179878523,179876037,179875187,179873248,179872990,179871530,179870495,179869834,179867849,179867495,179865888,179865360,179864128 Gene ID= ENSG00000197226.12 TPM= 29.58 Transcript Type= protein_coding chr5 179955459 180072161 179955459 180072161 - transcript3303.chr5.nnic@RNF130 transcript3303.chr5.nnic protein_coding 180071456,180040453,180013157,179980533,179980129,179978203,179970410,179966806,179963471,179955459 180072161,180040647,180013311,179980610,179980200,179978285,179970506,179967010,179963564,179955669 Gene ID= ENSG00000113269.13 TPM= 4.53 Transcript Type= NA chr5 180233604 180292092 180233604 180292092 - transcript3314.chr5.nic@MAPK9 transcript3314.chr5.nic protein_coding 180291848,180280440,180279796,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233604 180292092,180280608,180280036,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236526 Gene ID= ENSG00000050748.17 TPM= 6.79 Transcript Type= NA chr5 180233143 180292099 180233143 180292099 - ENST00000452135.6@MAPK9 ENST00000452135.6 protein_coding 180291848,180280440,180269280,180264781,180261684,180248973,180247439,180242573,180241031,180239924,180238332,180233143 180292099,180280608,180269409,180264839,180261822,180249138,180247510,180242755,180241155,180239987,180238403,180236526 Gene ID= ENSG00000050748.17 TPM= 37.58 Transcript Type= protein_coding chr5 180300690 180353387 180300690 180353387 - ENST00000253778.12@GFPT2 ENST00000253778.12 protein_coding 180353211,180338493,180336479,180335828,180331495,180330700,180328277,180324816,180324188,180318793,180316963,180316764,180316341,180313807,180312430,180307176,180304772,180302423,180300690 180353387,180338600,180336577,180335953,180331553,180330834,180328338,180324895,180324305,180318956,180317058,180316861,180316461,180313964,180312544,180307303,180304939,180302584,180301608 Gene ID= ENSG00000131459.12 TPM= 35.32 Transcript Type= protein_coding chr5 180601506 180649624 180601506 180649624 - ENST00000261937.10@FLT4 ENST00000261937.10 protein_coding 180649488,180631682,180630555,180630225,180629943,180629696,180629259,180628882,180626111,180625869,180623935,180622731,180621542,180621106,180620876,180620609,180620173,180619665,180619253,180619021,180618770,180616900,180616367,180614068,180613011,180612506,180611331,180609905,180608968,180601506 180649624,180631778,180630799,180630337,180630105,180629835,180629427,180628999,180626265,180626031,180624061,180622839,180621904,180621252,180621007,180620715,180620308,180619769,180619366,180619109,180618920,180616994,180616489,180614179,180613110,180612611,180611479,180610025,180609053,180603390 Gene ID= ENSG00000037280.15 TPM= 15.39 Transcript Type= protein_coding chr5 180790548 180810137 180790548 180810137 - ENST00000393340.7@MGAT1 ENST00000393340.7 protein_coding 180810040,180808648,180790548 180810137,180809076,180793097 Gene ID= ENSG00000131446.16 TPM= 72.52 Transcript Type= protein_coding chr5 180790543 180802885 180790543 180802885 - ENST00000307826.4@MGAT1 ENST00000307826.4 protein_coding 180802680,180790543 180802885,180793097 Gene ID= ENSG00000131446.16 TPM= 250.29 Transcript Type= protein_coding chr5 180790548 180809829 180790548 180809829 - ENST00000446023.6@MGAT1 ENST00000446023.6 protein_coding 180809634,180808648,180790548 180809829,180809076,180793097 Gene ID= ENSG00000131446.16 TPM= 8.22 Transcript Type= protein_coding chr5 180830948 180835700 180830948 180835700 + transcript3366.chr5.nnic@LINC00847 transcript3366.chr5.nnic lincRNA 180830948,180834312,180835422 180831229,180835051,180835700 Gene ID= ENSG00000245060.6 TPM= 1.81 Transcript Type= NA chr5 180831686 180839799 180831686 180839799 + transcript3367.chr5.nnic@LINC00847 transcript3367.chr5.nnic lincRNA 180831686,180834312,180837118 180831806,180834606,180839799 Gene ID= ENSG00000245060.6 TPM= 1.81 Transcript Type= NA chr5 180831027 180835700 180831027 180835700 + transcript3369.chr5.nnic@LINC00847 transcript3369.chr5.nnic lincRNA 180831027,180834312,180835422 180831806,180835051,180835700 Gene ID= ENSG00000245060.6 TPM= 1.81 Transcript Type= NA chr5 181040321 181061526 181040321 181061526 + transcript3386.chr5.nic@BTNL9 transcript3386.chr5.nic protein_coding 181040321,181045467,181047927,181050088,181053200,181053469,181054239,181055201,181055989,181058352,181059237 181040432,181045598,181048271,181050369,181053316,181053501,181054259,181055453,181056015,181058378,181061526 Gene ID= ENSG00000165810.16 TPM= 2.72 Transcript Type= NA chr5 181040225 181061523 181040225 181061523 + ENST00000327705.13@BTNL9 ENST00000327705.13 protein_coding 181040225,181045467,181047927,181050088,181053200,181053469,181054239,181055433,181055989,181058352,181059237 181040432,181045598,181048271,181050369,181053316,181053501,181054259,181055453,181056015,181058378,181061523 Gene ID= ENSG00000165810.16 TPM= 17.21 Transcript Type= protein_coding chr5 181191890 181194428 181191890 181194428 + transcript3396.chr5.nnic@AC008443.5 transcript3396.chr5.nnic antisense_RNA 181191890,181193342,181194234 181192016,181193467,181194428 Gene ID= ENSG00000250222.1 TPM= 1.81 Transcript Type= NA chr5 181191924 181194429 181191924 181194429 + ENST00000514487.1@AC008443.5 ENST00000514487.1 antisense_RNA 181191924,181194234 181192016,181194429 Gene ID= ENSG00000250222.1 TPM= 1.81 Transcript Type= antisense_RNA chr5 181203118 181205293 181203118 181205293 - ENST00000334421.5@TRIM7 ENST00000334421.5 protein_coding 181204589,181203118 181205293,181203640 Gene ID= ENSG00000146054.17 TPM= 1.81 Transcript Type= protein_coding chr5 181193924 181205172 181193924 181205172 - ENST00000274773.11@TRIM7 ENST00000274773.11 protein_coding 181204589,181203545,181199851,181199095,181198690,181198183,181193924 181205172,181203640,181200081,181199117,181198805,181198218,181195677 Gene ID= ENSG00000146054.17 TPM= 4.53 Transcript Type= protein_coding chr5 181236937 181244209 181236937 181244209 - ENST00000512805.5@RACK1 ENST00000512805.5 protein_coding 181243692,181242174,181241492,181239487,181239067,181238099,181237609,181236937 181244209,181242345,181241639,181239582,181239177,181238239,181237719,181237042 Gene ID= ENSG00000204628.11 TPM= 888.49 Transcript Type= protein_coding chr5 181236909 181243916 181236909 181243916 - ENST00000511473.5@RACK1 ENST00000511473.5 protein_coding 181243680,181242174,181241492,181239487,181239067,181238099,181237609,181236909 181243916,181242345,181241639,181239582,181239177,181238239,181237719,181237042 Gene ID= ENSG00000204628.11 TPM= 26.56 Transcript Type= nonsense_mediated_decay chr5 181236934 181243880 181236934 181243880 - ENST00000511566.5@RACK1 ENST00000511566.5 protein_coding 181243692,181242174,181241492,181239487,181239067,181236934 181243880,181242345,181241639,181239582,181239177,181237042 Gene ID= ENSG00000204628.11 TPM= 3.47 Transcript Type= protein_coding chr5 181236937 181243902 181236937 181243902 - ENST00000508682.5@RACK1 ENST00000508682.5 protein_coding 181243692,181242174,181241492,181240216,181239487,181239067,181238099,181237609,181236937 181243902,181242345,181241639,181240327,181239582,181239177,181238239,181237719,181237042 Gene ID= ENSG00000204628.11 TPM= 3.02 Transcript Type= nonsense_mediated_decay chr6 292097 351355 292097 351355 + ENST00000344450.9@DUSP22 ENST00000344450.9 protein_coding 292097,304628,311880,335114,345854,348103,348769,350822 292560,304661,311962,335163,345928,348274,348841,351355 Gene ID= ENSG00000112679.14 TPM= 6.34 Transcript Type= protein_coding chr6 292462 351353 292462 351353 + ENST00000419235.6@DUSP22 ENST00000419235.6 protein_coding 292462,304628,311880,335114,345854,348103,348769 292560,304661,311962,335163,345928,348274,351353 Gene ID= ENSG00000112679.14 TPM= 5.43 Transcript Type= protein_coding chr6 485134 693145 485134 693145 - transcript10.chr6.nnic@EXOC2 transcript10.chr6.nnic protein_coding 693019,689139,647501,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485134 693145,689212,647666,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764 Gene ID= ENSG00000112685.13 TPM= 1.81 Transcript Type= NA chr6 485157 693145 485157 693145 - transcript11.chr6.nnic@EXOC2 transcript11.chr6.nnic protein_coding 693019,689139,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,486634,485157 693145,689212,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764,486403 Gene ID= ENSG00000112685.13 TPM= 1.81 Transcript Type= NA chr6 485139 693145 485139 693145 - transcript13.chr6.nnic@EXOC2 transcript13.chr6.nnic protein_coding 693019,689139,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485139 693145,689212,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764 Gene ID= ENSG00000112685.13 TPM= 4.53 Transcript Type= NA chr6 485157 693146 485157 693146 - transcript14.chr6.nnic@EXOC2 transcript14.chr6.nnic protein_coding 693019,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,486634,485157 693146,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764,486403 Gene ID= ENSG00000112685.13 TPM= 3.62 Transcript Type= NA chr6 485133 693111 485133 693111 - ENST00000230449.8@EXOC2 ENST00000230449.8 protein_coding 693019,637701,632941,629835,619430,617711,610098,599080,598860,598021,592469,576757,572520,564864,564545,564033,562784,556484,555954,555227,553854,549175,532469,499645,497367,491125,488979,485133 693111,637861,633117,629961,619543,617835,610178,599225,598941,598123,592587,576882,572644,564929,564702,564154,562845,556564,556013,555288,553920,549291,532610,499700,497489,491186,489038,486764 Gene ID= ENSG00000112685.13 TPM= 36.22 Transcript Type= protein_coding chr6 1623806 2245692 1623806 2245692 - ENST00000380815.4@GMDS ENST00000380815.4 protein_coding 2245321,2124687,2117469,2115771,1960774,1959867,1930103,1742468,1726416,1624472,1623806 2245692,2124731,2117556,2115880,1960966,1959971,1930230,1742586,1726512,1624540,1624231 Gene ID= ENSG00000112699.10 TPM= 12.68 Transcript Type= protein_coding chr6 2245762 2413584 2245762 2413584 + transcript27.chr6.nnic@GMDS-AS1 transcript27.chr6.nnic lincRNA 2245762,2248837,2263601,2398577,2398866,2412780 2245930,2248926,2263684,2398778,2399037,2413584 Gene ID= ENSG00000250903.8 TPM= 1.81 Transcript Type= NA chr6 2765442 2785746 2765442 2785746 + transcript32.chr6.nnic@WRNIP1 transcript32.chr6.nnic protein_coding 2765442,2765950,2768691,2770120,2779263,2783406,2784324,2785007 2765525,2766444,2768882,2770361,2779492,2783561,2784403,2785746 Gene ID= ENSG00000124535.15 TPM= 7.24 Transcript Type= NA chr6 2765405 2785746 2765405 2785746 + transcript39.chr6.nnic@WRNIP1 transcript39.chr6.nnic protein_coding 2765405,2779263,2783406,2784324,2785007 2766444,2779492,2783561,2784403,2785746 Gene ID= ENSG00000124535.15 TPM= 5.43 Transcript Type= NA chr6 2765414 2785745 2765414 2785745 + ENST00000380771.8@WRNIP1 ENST00000380771.8 protein_coding 2765414,2768691,2770195,2779263,2783406,2784324,2785007 2766444,2768882,2770361,2779492,2783561,2784403,2785745 Gene ID= ENSG00000124535.15 TPM= 7.24 Transcript Type= protein_coding chr6 2832332 2842006 2832332 2842006 - ENST00000380739.5@SERPINB1 ENST00000380739.5 protein_coding 2841812,2840419,2838549,2837882,2836108,2835856,2832332 2842006,2840594,2838686,2837999,2836250,2836023,2834012 Gene ID= ENSG00000021355.12 TPM= 180.2 Transcript Type= protein_coding chr6 2854577 2876439 2854577 2876439 - transcript44.chr6.nic@SERPINB9P1 transcript44.chr6.nic lincRNA 2876293,2857911,2854577 2876439,2857995,2855690 Gene ID= ENSG00000230438.6 TPM= 1.81 Transcript Type= NA chr6 2887266 2903280 2887266 2903280 - ENST00000380698.4@SERPINB9 ENST00000380698.4 protein_coding 2903201,2900444,2896053,2895391,2893411,2891833,2887266 2903280,2900621,2896190,2895508,2893553,2891988,2890570 Gene ID= ENSG00000170542.5 TPM= 27.17 Transcript Type= protein_coding chr6 2948160 2972165 2948160 2972165 - ENST00000616722.3@SERPINB6 ENST00000616722.3 protein_coding 2971533,2968779,2959168,2955524,2954592,2953044,2948914,2948160 2972165,2968913,2959342,2955670,2954709,2953186,2949069,2948699 Gene ID= ENSG00000124570.17 TPM= 2.72 Transcript Type= protein_coding chr6 2948158 2971602 2948158 2971602 - transcript54.chr6.nic@SERPINB6 transcript54.chr6.nic protein_coding 2968779,2959168,2955524,2954592,2953044,2948914,2948158 2971602,2959342,2955670,2954709,2953186,2949069,2948699 Gene ID= ENSG00000124570.17 TPM= 17.47 Transcript Type= NA chr6 2948159 2971856 2948159 2971856 - ENST00000335686.9@SERPINB6 ENST00000335686.9 protein_coding 2971533,2959168,2955524,2954592,2953044,2948914,2948159 2971856,2959342,2955670,2954709,2953186,2949069,2948699 Gene ID= ENSG00000124570.17 TPM= 141.22 Transcript Type= protein_coding chr6 2948159 2971206 2948159 2971206 - ENST00000380529.5@SERPINB6 ENST00000380529.5 protein_coding 2971117,2959168,2955524,2954592,2953044,2948914,2948159 2971206,2959342,2955670,2954709,2953186,2949069,2948699 Gene ID= ENSG00000124570.17 TPM= 5.39 Transcript Type= protein_coding chr6 2948159 2971585 2948159 2971585 - ENST00000380546.7@SERPINB6 ENST00000380546.7 protein_coding 2971491,2959168,2955524,2954592,2953044,2948914,2948159 2971585,2959342,2955670,2954709,2953186,2949069,2948699 Gene ID= ENSG00000124570.17 TPM= 25.31 Transcript Type= protein_coding chr6 2948159 2971305 2948159 2971305 - ENST00000380539.5@SERPINB6 ENST00000380539.5 protein_coding 2971248,2959168,2955524,2954592,2953044,2948914,2948159 2971305,2959342,2955670,2954709,2953186,2949069,2948699 Gene ID= ENSG00000124570.17 TPM= 9.92 Transcript Type= protein_coding chr6 2988729 2991170 2988729 2991170 + transcript92.chr6.nnic@LINC01011 transcript92.chr6.nnic lincRNA 2988729,2989528,2989869 2988920,2989733,2991170 Gene ID= ENSG00000244041.7 TPM= 3.62 Transcript Type= NA chr6 2988648 2991173 2988648 2991173 + ENST00000605901.1@LINC01011 ENST00000605901.1 lincRNA 2988648,2989528,2989869 2988709,2989733,2991173 Gene ID= ENSG00000244041.7 TPM= 3.62 Transcript Type= lincRNA chr6 2988601 3019764 2988601 3019764 + transcript72.chr6.nic@NQO2 transcript72.chr6.nic protein_coding 2988601,2993931,3006468,3010025,3012544,3015530,3016884,3019479 2988709,2994053,3006559,3010189,3012674,3015643,3016985,3019764 Gene ID= ENSG00000124588.19 TPM= 7.68 Transcript Type= NA chr6 2999809 3019764 2999809 3019764 + transcript75.chr6.nic@NQO2 transcript75.chr6.nic protein_coding 2999809,3003669,3006468,3010025,3012544,3015530,3016884,3019479 3000085,3003789,3006559,3010189,3012674,3015643,3016985,3019764 Gene ID= ENSG00000124588.19 TPM= 7.68 Transcript Type= NA chr6 2999851 3018553 2999851 3018553 + transcript81.chr6.nnic@NQO2 transcript81.chr6.nnic protein_coding 2999851,3006468,3010025,3012544,3015530,3016884,3018193 3000085,3006559,3010189,3012674,3015643,3016985,3018553 Gene ID= ENSG00000124588.19 TPM= 9.96 Transcript Type= NA chr6 3063877 3115191 3063877 3115191 + transcript95.chr6.nnic@RIPK1 transcript95.chr6.nnic protein_coding 3063877,3076764,3077779,3080979,3083085,3085259,3089581,3104225,3105482,3110803,3113053 3064059,3076987,3077935,3081116,3083313,3085408,3089657,3104315,3106051,3110955,3115191 Gene ID= ENSG00000137275.13 TPM= 7.24 Transcript Type= NA chr6 3118714 3153588 3118714 3153588 + transcript106.chr6.nnic@BPHL transcript106.chr6.nnic protein_coding 3118714,3123657,3127242,3129045,3137362,3140386,3152488 3118847,3123760,3127408,3129198,3137422,3140509,3153588 Gene ID= ENSG00000137274.12 TPM= 1.81 Transcript Type= NA chr6 3118648 3153194 3118648 3153194 + transcript108.chr6.nic@BPHL transcript108.chr6.nic protein_coding 3118648,3123657,3127242,3129045,3137362,3140386,3152538 3118847,3123760,3127408,3129198,3137493,3140509,3153194 Gene ID= ENSG00000137274.12 TPM= 1.81 Transcript Type= NA chr6 3118692 3153578 3118692 3153578 + ENST00000380379.9@BPHL ENST00000380379.9 protein_coding 3118692,3123657,3127242,3129045,3137362,3140386,3152488 3118847,3123760,3127408,3129198,3137493,3140509,3153578 Gene ID= ENSG00000137274.12 TPM= 49.8 Transcript Type= protein_coding chr6 3153669 3157526 3153669 3157526 - ENST00000333628.3@TUBB2A ENST00000333628.3 protein_coding 3157407,3156044,3155625,3153669 3157526,3156152,3155735,3154923 Gene ID= ENSG00000137267.5 TPM= 21.73 Transcript Type= protein_coding chr6 3224283 3231730 3224283 3231730 - ENST00000473006.1@TUBB2B ENST00000473006.1 protein_coding 3231557,3226561,3226159,3224283 3231730,3226669,3226269,3225811 Gene ID= ENSG00000137285.9 TPM= 4.53 Transcript Type= processed_transcript chr6 3258894 3268049 3258894 3268049 + ENST00000438998.6@PSMG4 ENST00000438998.6 protein_coding 3258894,3263684,3267591 3259196,3263759,3268049 Gene ID= ENSG00000180822.11 TPM= 28.98 Transcript Type= protein_coding chr6 3268962 3457022 3268962 3457022 - ENST00000436008.6@SLC22A23 ENST00000436008.6 protein_coding 3455906,3415752,3410188,3323834,3298091,3289764,3286859,3285079,3284936,3283852,3268962 3457022,3415855,3410342,3324002,3298218,3289866,3287091,3285111,3284959,3283975,3273412 Gene ID= ENSG00000137266.14 TPM= 9.06 Transcript Type= protein_coding chr6 3722620 3752026 3722620 3752026 - ENST00000380283.4@PXDC1 ENST00000380283.4 protein_coding 3751276,3738057,3737079,3727551,3722620 3752026,3738148,3737196,3727662,3723736 Gene ID= ENSG00000168994.13 TPM= 26.26 Transcript Type= protein_coding chr6 3849388 3851317 3849388 3851317 + ENST00000380272.3@FAM50B ENST00000380272.3 protein_coding 3849388,3849789 3849486,3851317 Gene ID= ENSG00000145945.5 TPM= 27.17 Transcript Type= protein_coding chr6 4021301 4064984 4021301 4064984 + transcript125.chr6.nic@PRPF4B transcript125.chr6.nic protein_coding 4021301,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062213,4062557,4063074,4064801 4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4061700,4062299,4062633,4063119,4064984 Gene ID= ENSG00000112739.16 TPM= 2.72 Transcript Type= NA chr6 4021301 4063162 4021301 4063162 + transcript126.chr6.nic@PRPF4B transcript126.chr6.nic protein_coding 4021301,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4061015,4061655,4062213,4062557,4063074 4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4060686,4061147,4061700,4062299,4062633,4063162 Gene ID= ENSG00000112739.16 TPM= 1.81 Transcript Type= NA chr6 4021267 4064982 4021267 4064982 + ENST00000480058.5@PRPF4B ENST00000480058.5 protein_coding 4021267,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413,4063074 4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4062299,4064982 Gene ID= ENSG00000112739.16 TPM= 36.67 Transcript Type= nonsense_mediated_decay chr6 4021326 4061907 4021326 4061907 + ENST00000337659.10@PRPF4B ENST00000337659.10 protein_coding 4021326,4031559,4037397,4040772,4042487,4043813,4047175,4049016,4049732,4051957,4052720,4056321,4057036,4058728,4060413 4021466,4032755,4037570,4040927,4042568,4044023,4047248,4049106,4049879,4052094,4052873,4056435,4057187,4058814,4061907 Gene ID= ENSG00000112739.16 TPM= 34.86 Transcript Type= protein_coding chr6 4115689 4135597 4115689 4135597 - ENST00000380118.7@ECI2 ENST00000380118.7 protein_coding 4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115689 4135597,4133711,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029 Gene ID= ENSG00000198721.12 TPM= 109.27 Transcript Type= protein_coding chr6 4115706 4135597 4115706 4135597 - ENST00000361538.6@ECI2 ENST00000361538.6 protein_coding 4135511,4133549,4130767,4130372,4127762,4126135,4125250,4119186,4117308,4115706 4135597,4133701,4130865,4130560,4127831,4126237,4125370,4119275,4117451,4116029 Gene ID= ENSG00000198721.12 TPM= 62.18 Transcript Type= protein_coding chr6 4776391 4955548 4776391 4955548 + transcript147.chr6.nnic@CDYL transcript147.chr6.nnic protein_coding 4776391,4891713,4935581,4937565,4943546,4952266,4953898 4776807,4892379,4935771,4937737,4943756,4952409,4955548 Gene ID= ENSG00000153046.17 TPM= 3.62 Transcript Type= NA chr6 4776435 4954256 4776435 4954256 + ENST00000397588.7@CDYL ENST00000397588.7 protein_coding 4776435,4891713,4935515,4937565,4943546,4952266,4953898 4776807,4892379,4935771,4937737,4943756,4952409,4954256 Gene ID= ENSG00000153046.17 TPM= 1.81 Transcript Type= protein_coding chr6 4995047 5004050 4995047 5004050 - transcript152.chr6.nic@RPP40 transcript152.chr6.nic protein_coding 5003880,5002101,5000563,4999809,4998716,4996222,4995047 5004050,5002245,5000631,4999904,4998841,4996420,4996085 Gene ID= ENSG00000124787.13 TPM= 1.81 Transcript Type= NA chr6 4994732 5004047 4994732 5004047 - ENST00000380051.6@RPP40 ENST00000380051.6 protein_coding 5003880,5002101,5000563,4999809,4998716,4996222,4995951,4994732 5004047,5002245,5000631,4999904,4998841,4996420,4996085,4995276 Gene ID= ENSG00000124787.13 TPM= 10.87 Transcript Type= protein_coding chr6 4995047 5004036 4995047 5004036 - ENST00000319533.9@RPP40 ENST00000319533.9 protein_coding 5003880,5002101,4999809,4998716,4996222,4995951,4995047 5004036,5002245,4999904,4998841,4996420,4996085,4995276 Gene ID= ENSG00000124787.13 TPM= 1.81 Transcript Type= protein_coding chr6 5003790 5043458 5003790 5043458 + transcript154.chr6.nnic@AL359643.3 transcript154.chr6.nnic lincRNA 5003790,5021381,5042506 5003959,5021473,5043458 Gene ID= ENSG00000272142.1 TPM= 1.81 Transcript Type= NA chr6 5003790 5048185 5003790 5048185 - transcript155.chr6.nnic@AL359643.2 transcript155.chr6.nnic lincRNA 5042588,5021381,5003790 5048185,5021473,5003959 Gene ID= ENSG00000271978.1 TPM= 3.62 Transcript Type= NA chr6 5108728 5132894 5108728 5132894 - ENST00000458438.2@LYRM4 ENST00000458438.2 protein_coding 5132718,5108728 5132894,5109491 Gene ID= ENSG00000214113.10 TPM= 1.81 Transcript Type= processed_transcript chr6 5186600 5260737 5186600 5260737 - ENST00000500576.4@LYRM4 ENST00000500576.4 protein_coding 5260648,5216618,5186600 5260737,5216738,5186980 Gene ID= ENSG00000214113.10 TPM= 1.81 Transcript Type= protein_coding chr6 5261513 5771591 5261513 5771591 + transcript159.chr6.nic@FARS2 transcript159.chr6.nic protein_coding 5261513,5272426,5368550,5404542,5431041,5545180,5613169,5771291 5261660,5272489,5369182,5404701,5431172,5545340,5613320,5771591 Gene ID= ENSG00000145982.11 TPM= 2.72 Transcript Type= NA chr6 5261508 5771591 5261508 5771591 + transcript165.chr6.nnic@FARS2 transcript165.chr6.nnic protein_coding 5261508,5368550,5431041,5545180,5613169,5771291 5261660,5369182,5431172,5545340,5613320,5771591 Gene ID= ENSG00000145982.11 TPM= 1.81 Transcript Type= NA chr6 5261526 5771580 5261526 5771580 + ENST00000274680.8@FARS2 ENST00000274680.8 protein_coding 5261526,5368550,5404542,5431041,5545180,5613169,5771291 5261660,5369182,5404701,5431172,5545340,5613320,5771580 Gene ID= ENSG00000145982.11 TPM= 26.26 Transcript Type= protein_coding chr6 5997999 6006967 5997999 6006967 - ENST00000244766.6@NRN1 ENST00000244766.6 protein_coding 6006695,6002353,5997999 6006967,6002497,5999204 Gene ID= ENSG00000124785.8 TPM= 5.43 Transcript Type= protein_coding chr6 6144071 6320662 6144071 6320662 - transcript180.chr6.nnic@F13A1 transcript180.chr6.nnic protein_coding 6320587,6318535,6305351,6266558,6250811,6248312,6224686,6222033,6197223,6174580,6167458,6151813,6144071 6320662,6318682,6305539,6266809,6250929,6248419,6224860,6222171,6197326,6174867,6167618,6151949,6145772 Gene ID= ENSG00000124491.15 TPM= 15.39 Transcript Type= NA chr6 6305113 6320642 6305113 6320642 - ENST00000451619.1@F13A1 ENST00000451619.1 protein_coding 6320587,6318535,6305113 6320642,6318682,6305539 Gene ID= ENSG00000124491.15 TPM= 3.62 Transcript Type= protein_coding chr6 7268306 7313207 7268306 7313207 - ENST00000474597.5@SSR1 ENST00000474597.5 protein_coding 7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7289868,7268306 7313207,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931,7269154 Gene ID= ENSG00000124783.12 TPM= 2.72 Transcript Type= protein_coding chr6 7281143 7313207 7281143 7313207 - ENST00000244763.8@SSR1 ENST00000244763.8 protein_coding 7313042,7309917,7303550,7301310,7298747,7297923,7295392,7281143 7313207,7310029,7303637,7301572,7298823,7298001,7295485,7289931 Gene ID= ENSG00000124783.12 TPM= 108.67 Transcript Type= protein_coding chr6 7287570 7313198 7287570 7313198 - ENST00000397511.6@SSR1 ENST00000397511.6 protein_coding 7313042,7309917,7303550,7301310,7298747,7297923,7295392,7295088,7287570 7313198,7310029,7303637,7301572,7298823,7298001,7295485,7295102,7289931 Gene ID= ENSG00000124783.12 TPM= 4.53 Transcript Type= protein_coding chr6 7389798 7417899 7389798 7417899 + transcript199.chr6.nnic@RIOK1 transcript199.chr6.nnic protein_coding 7389798,7392717,7393099,7395053,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331 7390073,7392969,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7417899 Gene ID= ENSG00000124784.8 TPM= 1.81 Transcript Type= NA chr6 7389789 7417899 7389789 7417899 + transcript200.chr6.nic@RIOK1 transcript200.chr6.nic protein_coding 7389789,7393099,7395021,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331 7390073,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7417899 Gene ID= ENSG00000124784.8 TPM= 2.72 Transcript Type= NA chr6 7389496 7418037 7389496 7418037 + ENST00000379834.6@RIOK1 ENST00000379834.6 protein_coding 7389496,7393099,7395053,7396703,7398698,7400958,7402603,7402817,7403941,7404418,7404918,7405249,7410386,7411332,7412889,7414238,7417331 7390073,7393303,7395143,7396772,7398740,7401050,7402715,7402897,7404027,7404555,7405021,7405355,7410451,7411451,7412942,7414390,7418037 Gene ID= ENSG00000124784.8 TPM= 36.22 Transcript Type= protein_coding chr6 7541575 7586717 7541575 7586717 + ENST00000379802.7@DSP ENST00000379802.7 protein_coding 7541575,7555718,7558116,7559226,7562652,7563736,7565359,7566377,7567354,7567781,7568437,7569186,7570437,7571383,7571842,7574086,7574657,7575295,7576294,7576959,7577779,7578464,7579275,7582642 7542085,7555820,7558264,7559400,7562780,7563786,7565520,7566481,7567449,7567906,7568589,7569340,7570563,7571584,7572068,7574252,7574795,7575488,7576456,7577042,7577886,7578562,7581569,7586717 Gene ID= ENSG00000096696.13 TPM= 10.87 Transcript Type= protein_coding chr6 7590173 7611966 7590173 7611966 + transcript210.chr6.nnic@SNRNP48 transcript210.chr6.nnic protein_coding 7590173,7593734,7594099,7595027,7601336,7602623,7605398,7606031,7608825 7590350,7593847,7594159,7595101,7601524,7602744,7605486,7606195,7611966 Gene ID= ENSG00000168566.12 TPM= 1.81 Transcript Type= NA chr6 7881517 7910814 7881517 7910814 - ENST00000379757.8@TXNDC5 ENST00000379757.8 protein_coding 7910514,7904574,7899576,7895106,7891621,7889495,7888705,7885961,7884359,7881517 7910814,7904723,7899681,7895202,7891736,7889581,7888848,7886043,7884488,7883266 Gene ID= ENSG00000239264.8 TPM= 335.05 Transcript Type= protein_coding chr6 8013984 8064444 8013984 8064444 - transcript228.chr6.nnic@BLOC1S5-TXNDC5 transcript228.chr6.nnic protein_coding 8064265,8062534,8041139,8013984 8064444,8062616,8041268,8015828 Gene ID= ENSG00000259040.5 TPM= 3.92 Transcript Type= NA chr6 8012316 8064392 8012316 8064392 - transcript225.chr6.nnic@BLOC1S5 transcript225.chr6.nnic protein_coding 8064265,8062566,8041139,8026367,8012316 8064392,8062616,8041268,8026425,8015828 Gene ID= ENSG00000188428.19 TPM= 2.72 Transcript Type= NA chr6 8013567 8064414 8013567 8064414 - ENST00000397457.6@BLOC1S5 ENST00000397457.6 protein_coding 8064265,8062534,8041139,8026367,8013567 8064414,8062616,8041268,8026425,8015828 Gene ID= ENSG00000188428.19 TPM= 29.28 Transcript Type= protein_coding chr6 8013978 8064393 8013978 8064393 - ENST00000244777.6@BLOC1S5 ENST00000244777.6 protein_coding 8064265,8062534,8041139,8027207,8026367,8013978 8064393,8062616,8041268,8027399,8026425,8015828 Gene ID= ENSG00000188428.19 TPM= 2.11 Transcript Type= nonsense_mediated_decay chr6 8079395 8102578 8079395 8102578 - ENST00000379715.9@EEF1E1 ENST00000379715.9 protein_coding 8102435,8097267,8090186,8079395 8102578,8097467,8090281,8080030 Gene ID= ENSG00000124802.11 TPM= 35.32 Transcript Type= protein_coding chr6 8089954 8102559 8089954 8102559 - ENST00000507463.1@EEF1E1 ENST00000507463.1 protein_coding 8102435,8097267,8089954 8102559,8097467,8090281 Gene ID= ENSG00000124802.11 TPM= 2.72 Transcript Type= protein_coding chr6 8413070 8435567 8413070 8435567 - transcript233.chr6.nnic@SLC35B3 transcript233.chr6.nnic protein_coding 8435343,8434385,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413070 8435567,8434430,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699 Gene ID= ENSG00000124786.9 TPM= 7.24 Transcript Type= NA chr6 8413070 8435878 8413070 8435878 - transcript235.chr6.nnic@SLC35B3 transcript235.chr6.nnic protein_coding 8435343,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413070 8435878,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699 Gene ID= ENSG00000124786.9 TPM= 6.34 Transcript Type= NA chr6 8413070 8435549 8413070 8435549 - transcript236.chr6.nnic@SLC35B3 transcript236.chr6.nnic protein_coding 8435439,8429864,8427937,8422470,8420721,8419580,8417402,8416884,8414908,8413070 8435549,8430157,8428058,8422624,8420828,8419677,8417494,8416995,8414977,8413699 Gene ID= ENSG00000124786.9 TPM= 1.81 Transcript Type= NA chr6 8435646 8562946 8435646 8562946 . transcript240.chr6.nnic@NA transcript240.chr6.nnic NA 8435646,8437940,8558585,8561196 8436178,8438031,8558643,8562946 Gene ID= novel_gene_chr6_241 TPM= 1.81 Transcript Type= NA chr6 10694695 10709782 10694695 10709782 + ENST00000379568.3@PAK1IP1 ENST00000379568.3 protein_coding 10694695,10697324,10702369,10702565,10703405,10704507,10704747,10707415,10708953,10709238 10695069,10697486,10702489,10702639,10703457,10704652,10704844,10707514,10709076,10709782 Gene ID= ENSG00000111845.4 TPM= 18.11 Transcript Type= protein_coding chr6 10722975 10731129 10722975 10731129 + ENST00000229563.5@TMEM14C ENST00000229563.5 protein_coding 10722975,10724570,10724961,10725907,10728640,10730615 10723241,10724633,10725037,10726008,10728727,10731129 Gene ID= ENSG00000111843.13 TPM= 140.36 Transcript Type= protein_coding chr6 10747759 10756981 10747759 10756981 + ENST00000379542.9@TMEM14B ENST00000379542.9 protein_coding 10747759,10749202,10749622,10751133,10755142,10756467 10747881,10749268,10749698,10751234,10755232,10756981 Gene ID= ENSG00000137210.13 TPM= 144.43 Transcript Type= protein_coding chr6 10747817 10756973 10747817 10756973 + ENST00000473276.5@TMEM14B ENST00000473276.5 protein_coding 10747817,10749202,10755142,10756467 10747881,10749268,10755232,10756973 Gene ID= ENSG00000137210.13 TPM= 2.26 Transcript Type= protein_coding chr6 10747811 10756947 10747811 10756947 + ENST00000379530.7@TMEM14B ENST00000379530.7 protein_coding 10747811,10749202,10749622,10755142,10756467 10747881,10749268,10749698,10755232,10756947 Gene ID= ENSG00000137210.13 TPM= 8.15 Transcript Type= protein_coding chr6 11183298 11232682 11183298 11232682 - ENST00000379446.9@NEDD9 ENST00000379446.9 protein_coding 11232504,11213281,11193591,11192345,11189964,11188218,11183298 11232682,11213727,11193692,11192446,11191205,11188307,11185671 Gene ID= ENSG00000111859.16 TPM= 5.89 Transcript Type= protein_coding chr6 11183299 11192932 11183299 11192932 - transcript276.chr6.nic@NEDD9 transcript276.chr6.nic protein_coding 11192345,11189964,11188218,11183299 11192932,11191205,11188307,11185671 Gene ID= ENSG00000111859.16 TPM= 3.17 Transcript Type= NA chr6 12290363 12297194 12290363 12297194 + ENST00000379375.5@EDN1 ENST00000379375.5 protein_coding 12290363,12292341,12293941,12294261,12295962 12290693,12292509,12294096,12294404,12297194 Gene ID= ENSG00000078401.6 TPM= 9.06 Transcript Type= protein_coding chr6 13304952 13328553 13304952 13328553 - transcript288.chr6.nic@TBC1D7 transcript288.chr6.nic protein_coding 13328316,13326787,13325094,13320908,13316571,13307600,13306398,13304952 13328553,13326906,13325174,13321095,13316708,13307745,13306527,13305187 Gene ID= ENSG00000145979.17 TPM= 3.62 Transcript Type= NA chr6 13304952 13328533 13304952 13328533 - transcript291.chr6.nic@TBC1D7 transcript291.chr6.nic protein_coding 13328456,13326787,13325094,13320908,13316571,13307600,13306398,13304952 13328533,13326963,13325174,13321095,13316708,13307745,13306527,13305187 Gene ID= ENSG00000145979.17 TPM= 1.81 Transcript Type= NA chr6 13304951 13328531 13304951 13328531 - ENST00000356436.8@TBC1D7 ENST00000356436.8 protein_coding 13328456,13326787,13325094,13320908,13316571,13307600,13306398,13304951 13328531,13326906,13325174,13321095,13316708,13307745,13306527,13305187 Gene ID= ENSG00000145979.17 TPM= 4.53 Transcript Type= protein_coding chr6 13615327 13621205 13615327 13621205 + ENST00000451315.6@NOL7 ENST00000451315.6 protein_coding 13615327,13615712,13616463,13617770,13618058,13620208,13620408,13620754 13615624,13615772,13616521,13617801,13618139,13620329,13620485,13621205 Gene ID= ENSG00000225921.6 TPM= 67.01 Transcript Type= protein_coding chr6 13621499 13710838 13621499 13710838 - transcript299.chr6.nnic@RANBP9 transcript299.chr6.nnic protein_coding 13710729,13699519,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621499 13710838,13699697,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492 Gene ID= ENSG00000010017.12 TPM= 6.34 Transcript Type= NA chr6 13621499 13710921 13621499 13710921 - transcript301.chr6.nnic@RANBP9 transcript301.chr6.nnic protein_coding 13710729,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621499 13710921,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492 Gene ID= ENSG00000010017.12 TPM= 8.15 Transcript Type= NA chr6 13621498 13711564 13621498 13711564 - ENST00000011619.5@RANBP9 ENST00000011619.5 protein_coding 13710935,13696785,13658780,13657109,13652659,13644545,13642479,13641199,13639563,13637808,13634431,13632370,13625653,13621498 13711564,13696896,13658832,13657276,13652681,13644729,13642591,13641307,13639753,13637955,13634552,13632521,13625764,13622492 Gene ID= ENSG00000010017.12 TPM= 12.68 Transcript Type= protein_coding chr6 14117451 14136674 14117451 14136674 + transcript310.chr6.nnic@CD83 transcript310.chr6.nnic protein_coding 14117451,14117950,14131520,14133649,14135108 14117584,14118065,14131748,14133755,14136674 Gene ID= ENSG00000112149.9 TPM= 2.72 Transcript Type= NA chr6 15245464 15521327 15245464 15521327 + transcript312.chr6.nnic@JARID2 transcript312.chr6.nnic protein_coding 15245464,15246381,15374117,15410224,15452006,15468542,15487307,15496132,15500907,15504500,15507136,15507346,15508340,15511296,15512208,15512915,15513239,15517161,15520069 15245607,15246584,15374252,15410365,15452175,15468718,15487542,15497170,15501409,15504592,15507254,15507416,15508454,15511401,15512390,15513045,15513422,15517268,15521327 Gene ID= ENSG00000008083.13 TPM= 2.72 Transcript Type= NA chr6 15248855 15522040 15248855 15522040 + ENST00000397311.4@JARID2 ENST00000397311.4 protein_coding 15248855,15374117,15410224,15452006,15468542,15487307,15496132,15500907,15504500,15507136,15507346,15508340,15511296,15512208,15512915,15513239,15517161,15520069 15248964,15374252,15410365,15452175,15468718,15487542,15497170,15501409,15504592,15507254,15507416,15508454,15511401,15512390,15513045,15513422,15517268,15522040 Gene ID= ENSG00000008083.13 TPM= 1.81 Transcript Type= protein_coding chr6 15522802 15663028 15522802 15663028 - transcript316.chr6.nic@DTNBP1 transcript316.chr6.nic protein_coding 15662814,15660383,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522802 15663028,15660521,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219 Gene ID= ENSG00000047579.19 TPM= 2.26 Transcript Type= NA chr6 15522801 15663042 15522801 15663042 - ENST00000344537.9@DTNBP1 ENST00000344537.9 protein_coding 15662814,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522801 15663042,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524669,15523219 Gene ID= ENSG00000047579.19 TPM= 17.66 Transcript Type= protein_coding chr6 15522843 15663058 15522843 15663058 - ENST00000513680.5@DTNBP1 ENST00000513680.5 protein_coding 15662814,15660383,15652087,15651313,15637744,15627343,15615267,15593059,15533236,15524526,15522843 15663058,15660521,15652140,15651363,15637804,15627475,15615399,15593081,15533395,15524667,15523219 Gene ID= ENSG00000047579.19 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr6 15522810 15663007 15522810 15663007 - ENST00000510395.5@DTNBP1 ENST00000510395.5 protein_coding 15662814,15652087,15651313,15637744,15627343,15615267,15593059,15533240,15524526,15522810 15663007,15652140,15651408,15637804,15627475,15615399,15593081,15533395,15524669,15523219 Gene ID= ENSG00000047579.19 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr6 15522810 15663058 15522810 15663058 - ENST00000622898.4@DTNBP1 ENST00000622898.4 protein_coding 15662814,15637744,15627343,15615267,15593059,15533240,15524526,15522810 15663058,15637804,15627475,15615399,15593081,15533395,15524669,15523219 Gene ID= ENSG00000047579.19 TPM= 2.26 Transcript Type= protein_coding chr6 16129125 16146881 16129125 16146881 + ENST00000356840.7@MYLIP ENST00000356840.7 protein_coding 16129125,16130557,16141625,16143020,16143699,16144897,16146662 16129409,16130747,16141810,16143217,16143863,16145317,16146881 Gene ID= ENSG00000007944.14 TPM= 8.15 Transcript Type= protein_coding chr6 16238537 16295547 16238537 16295547 + transcript324.chr6.nnic@GMPR transcript324.chr6.nnic protein_coding 16238537,16246842,16250284,16254562,16274415,16278784,16285793,16289426,16290462,16295006 16238780,16246961,16250367,16254735,16274496,16278890,16285835,16289568,16290621,16295547 Gene ID= ENSG00000137198.9 TPM= 2.72 Transcript Type= NA chr6 16238580 16295549 16238580 16295549 + ENST00000259727.4@GMPR ENST00000259727.4 protein_coding 16238580,16246842,16250284,16254562,16274415,16278784,16285793,16290462,16295006 16238780,16246961,16250367,16254735,16274496,16278890,16285835,16290621,16295549 Gene ID= ENSG00000137198.9 TPM= 69.73 Transcript Type= protein_coding chr6 17393216 17557792 17393216 17557792 + ENST00000229922.6@CAP2 ENST00000229922.6 protein_coding 17393216,17421555,17426590,17462996,17507169,17507641,17513849,17539269,17540973,17542837,17543061,17551464,17556359 17393746,17421676,17426690,17463073,17507312,17507726,17513954,17539458,17541148,17542960,17543143,17551604,17557792 Gene ID= ENSG00000112186.11 TPM= 22.64 Transcript Type= protein_coding chr6 17600355 17611719 17600355 17611719 + ENST00000259963.3@FAM8A1 ENST00000259963.3 protein_coding 17600355,17602590,17604906,17605874,17608195 17601121,17602710,17605029,17606013,17611719 Gene ID= ENSG00000137414.5 TPM= 18.11 Transcript Type= protein_coding chr6 17615036 17706935 17615036 17706935 - transcript341.chr6.nnic@NUP153 transcript341.chr6.nnic protein_coding 17706277,17688396,17675522,17675229,17674905,17669430,17669293,17668975,17665239,17662018,17661653,17649163,17647807,17646067,17639939,17637153,17632650,17628655,17625808,17624561,17616527,17615036 17706935,17688618,17675770,17675368,17675033,17669546,17669337,17669028,17665385,17662070,17661779,17649300,17647905,17646154,17640046,17637770,17632844,17629539,17626164,17624833,17616695,17616181 Gene ID= ENSG00000124789.11 TPM= 1.81 Transcript Type= NA chr6 17760354 17987589 17760354 17987589 - transcript347.chr6.nic@KIF13A transcript347.chr6.nic protein_coding 17987409,17987054,17898168,17873377,17856030,17855437,17851955,17850323,17849377,17837472,17836878,17833961,17831101,17828240,17826038,17825768,17817020,17808768,17805475,17804361,17799952,17799266,17796669,17794572,17794249,17789872,17787776,17785515,17783646,17781177,17780730,17779592,17778947,17777277,17775015,17773478,17771908,17764155,17760354 17987589,17987144,17898180,17873437,17856122,17855617,17852042,17850457,17849489,17837583,17837090,17834071,17831235,17828370,17826124,17825934,17817233,17808930,17805615,17804510,17800113,17799439,17796820,17794704,17794395,17789910,17787875,17785641,17783701,17781301,17780906,17779684,17779099,17777354,17775062,17773583,17772059,17764946,17760877 Gene ID= ENSG00000137177.19 TPM= 6.79 Transcript Type= NA chr6 17814927 17987654 17814927 17987654 - transcript350.chr6.nnic@KIF13A transcript350.chr6.nnic protein_coding 17987409,17987054,17898168,17873377,17856030,17855437,17851955,17850323,17849377,17837472,17836878,17833961,17831101,17828240,17826038,17825768,17817020,17814927 17987654,17987144,17898180,17873437,17856122,17855617,17852042,17850457,17849489,17837583,17837090,17834071,17831235,17828370,17826124,17825934,17817233,17815637 Gene ID= ENSG00000137177.19 TPM= 2.26 Transcript Type= NA chr6 17950406 17987623 17950406 17987623 - ENST00000502704.2@KIF13A ENST00000502704.2 protein_coding 17987409,17987054,17950406 17987623,17987144,17951429 Gene ID= ENSG00000137177.19 TPM= 7.24 Transcript Type= protein_coding chr6 18128311 18155074 18128311 18155074 - ENST00000309983.4@TPMT ENST00000309983.4 protein_coding 18155033,18148988,18147823,18143596,18139665,18138963,18133804,18132133,18128311 18155074,18149171,18147915,18143728,18139717,18139037,18133889,18132177,18130780 Gene ID= ENSG00000137364.4 TPM= 28.98 Transcript Type= protein_coding chr6 18155415 18223859 18155415 18223859 + transcript357.chr6.nic@KDM1B transcript357.chr6.nic protein_coding 18155415,18155883,18159883,18161327,18162835,18166267,18171363,18185772,18187792,18191197,18197057,18197587,18200439,18201486,18205537,18207398,18208132,18212488,18213656,18215007,18217733,18221909 18155571,18155926,18159982,18161454,18162924,18166378,18171479,18185810,18188002,18191381,18197233,18197661,18200576,18201657,18205664,18207529,18208206,18212604,18213781,18215129,18217885,18223859 Gene ID= ENSG00000165097.13 TPM= 7.24 Transcript Type= NA chr6 18224180 18264282 18224180 18264282 - transcript359.chr6.nnic@DEK transcript359.chr6.nnic protein_coding 18264098,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18224180 18264282,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730 Gene ID= ENSG00000124795.14 TPM= 6.79 Transcript Type= NA chr6 18223868 18264823 18223868 18264823 - ENST00000397239.7@DEK ENST00000397239.7 protein_coding 18264385,18263843,18258304,18257953,18256361,18255731,18249651,18237381,18236452,18226174,18223868 18264823,18263996,18258405,18258062,18256455,18255851,18249839,18237516,18236600,18226242,18225730 Gene ID= ENSG00000124795.14 TPM= 94.63 Transcript Type= protein_coding chr6 19837370 19840680 19837370 19840680 + transcript362.chr6.nnic@ID4 transcript362.chr6.nnic protein_coding 19837370,19838143,19838584,19839210 19837411,19838195,19838642,19840680 Gene ID= ENSG00000172201.11 TPM= 1.81 Transcript Type= NA chr6 19837386 19840684 19837386 19840684 + ENST00000378700.7@ID4 ENST00000378700.7 protein_coding 19837386,19838584,19839210 19838195,19838642,19840684 Gene ID= ENSG00000172201.11 TPM= 14.49 Transcript Type= protein_coding chr6 20403639 20493714 20403639 20493714 + transcript367.chr6.nic@E2F3 transcript367.chr6.nic protein_coding 20403639,20479846,20481206,20482762,20486689,20488113,20490168 20403832,20479957,20481425,20482920,20486803,20488248,20493714 Gene ID= ENSG00000112242.14 TPM= 3.17 Transcript Type= NA chr6 20403679 20493714 20403679 20493714 + ENST00000535432.2@E2F3 ENST00000535432.2 protein_coding 20403679,20479846,20481224,20482762,20486689,20488113,20490168 20403832,20479957,20481425,20482920,20486803,20488248,20493714 Gene ID= ENSG00000112242.14 TPM= 3.17 Transcript Type= protein_coding chr6 20534457 21232404 20534457 21232404 + ENST00000274695.8@CDKAL1 ENST00000274695.8 protein_coding 20534457,20535351,20546346,20548593,20649293,20739519,20758595,20781145,20846075,20955419,21000227,21065048,21108401,21198021,21201110,21230848 20534574,20535394,20546523,20548705,20649377,20739615,20758643,20781265,20846178,20955585,21000372,21065228,21108463,21198104,21201274,21232404 Gene ID= ENSG00000145996.11 TPM= 8.6 Transcript Type= protein_coding chr6 20534577 21232401 20534577 21232401 + transcript371.chr6.nic@CDKAL1 transcript371.chr6.nic protein_coding 20534577,20535351,20546346,20548593,20649293,20739519,20758595,20781145,20846075,20955419,21000227,21065048,21108401,21198021,21201110,21230848 20535199,20535394,20546523,20548705,20649377,20739615,20758643,20781265,20846178,20955585,21000372,21065228,21108463,21198104,21201274,21232401 Gene ID= ENSG00000145996.11 TPM= 2.26 Transcript Type= NA chr6 22113280 22196551 22113280 22196551 + transcript378.chr6.nnic@CASC15 transcript378.chr6.nnic lincRNA 22113280,22173998,22191567,22194045 22113435,22174062,22191656,22196551 Gene ID= ENSG00000272168.6 TPM= 5.43 Transcript Type= NA chr6 22113298 22196551 22113298 22196551 + transcript380.chr6.nnic@CASC15 transcript380.chr6.nnic lincRNA 22113298,22191567,22194045 22113435,22191656,22196551 Gene ID= ENSG00000272168.6 TPM= 1.81 Transcript Type= NA chr6 24402921 24425581 24402921 24425581 + transcript385.chr6.nnic@MRS2 transcript385.chr6.nnic protein_coding 24402921,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422965,24423584 24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423050,24425581 Gene ID= ENSG00000124532.14 TPM= 3.02 Transcript Type= NA chr6 24402908 24426194 24402908 24426194 + ENST00000274747.11@MRS2 ENST00000274747.11 protein_coding 24402908,24405168,24412222,24415033,24416397,24418084,24418461,24422937,24423584 24403236,24405241,24412395,24415163,24416513,24418236,24418578,24423050,24426194 Gene ID= ENSG00000124532.14 TPM= 1.2 Transcript Type= protein_coding chr6 24402954 24423476 24402954 24423476 + ENST00000378353.5@MRS2 ENST00000378353.5 protein_coding 24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937 24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423476 Gene ID= ENSG00000124532.14 TPM= 13.58 Transcript Type= protein_coding chr6 24402954 24425582 24402954 24425582 + ENST00000378386.7@MRS2 ENST00000378386.7 protein_coding 24402954,24405168,24408408,24409461,24412222,24415033,24416397,24418084,24418461,24422937,24423584 24403236,24405241,24408444,24409573,24412395,24415163,24416513,24418236,24418578,24423050,24425582 Gene ID= ENSG00000124532.14 TPM= 27.47 Transcript Type= protein_coding chr6 24494852 24537207 24494852 24537207 + ENST00000357578.7@ALDH5A1 ENST00000357578.7 protein_coding 24494852,24502523,24503263,24504869,24515167,24520401,24522767,24527997,24532119,24533507 24495350,24502606,24503433,24504985,24515310,24520544,24522925,24528166,24532177,24537207 Gene ID= ENSG00000112294.12 TPM= 29.88 Transcript Type= protein_coding chr6 24667035 24705065 24667035 24705065 + ENST00000537591.5@ACOT13 ENST00000537591.5 protein_coding 24667035,24687405,24697883,24701459 24667344,24687693,24698067,24705065 Gene ID= ENSG00000112304.10 TPM= 9.96 Transcript Type= protein_coding chr6 24713400 24719156 24713400 24719156 - transcript400.chr6.nic@C6orf62 transcript400.chr6.nic protein_coding 24718540,24716148,24713400 24719156,24716324,24714440 Gene ID= ENSG00000112308.12 TPM= 150.32 Transcript Type= NA chr6 24774931 24786095 24774931 24786095 + ENST00000356509.7@GMNN ENST00000356509.7 protein_coding 24774931,24777222,24780663,24781477,24784087,24784444,24785638 24775112,24777297,24780740,24781621,24784169,24784554,24786095 Gene ID= ENSG00000112312.9 TPM= 4.53 Transcript Type= protein_coding chr6 24774938 24786099 24774938 24786099 + ENST00000230056.7@GMNN ENST00000230056.7 protein_coding 24774938,24777222,24780663,24781477,24784087,24784444,24785638 24775244,24777297,24780740,24781621,24784169,24784554,24786099 Gene ID= ENSG00000112312.9 TPM= 5.43 Transcript Type= protein_coding chr6 24839970 24911105 24839970 24911105 - transcript406.chr6.nic@RIPOR2 transcript406.chr6.nic protein_coding 24910818,24875691,24873644,24872881,24870866,24869094,24865301,24860973,24852575,24850597,24849802,24848025,24839970 24911105,24875817,24873799,24872959,24870889,24869147,24865450,24861036,24852618,24850722,24849950,24848154,24843554 Gene ID= ENSG00000111913.17 TPM= 1.81 Transcript Type= NA chr6 25081069 25138165 25081069 25138165 - transcript418.chr6.nic@CMAHP transcript418.chr6.nic transcribed_unitary_pseudogene 25138074,25137620,25114991,25113592,25109956,25109500,25106359,25097061,25093514,25091896,25086784,25084480,25081069 25138165,25137823,25115100,25113782,25110103,25109581,25108713,25097201,25093688,25092012,25086899,25084576,25081879 Gene ID= ENSG00000168405.16 TPM= 2.72 Transcript Type= NA chr6 25279428 25620530 25279428 25620530 + ENST00000329474.6@CARMIL1 ENST00000329474.6 protein_coding 25279428,25284812,25420114,25426501,25435483,25449898,25450339,25450638,25465873,25471169,25472427,25482257,25488482,25491732,25491948,25495111,25500166,25509656,25510507,25510708,25515675,25517347,25520244,25528795,25537855,25539947,25550910,25554009,25556701,25580924,25581243,25594415,25600314,25604812,25606061,25610050,25619447 25279835,25284909,25420164,25426560,25435604,25449995,25450409,25450711,25465948,25471257,25472521,25482343,25488585,25491809,25492024,25495215,25500235,25509737,25510606,25510762,25515847,25517415,25520337,25528893,25537983,25540078,25551085,25554096,25556850,25580990,25581439,25594527,25600746,25604893,25606273,25610181,25620530 Gene ID= ENSG00000079691.17 TPM= 5.43 Transcript Type= protein_coding chr6 25962800 25979628 25962800 25979628 + transcript431.chr6.nnic@TRIM38 transcript431.chr6.nnic protein_coding 25962800,25963049,25966335,25969325,25971869,25973054,25973173,25978692 25962855,25963282,25966933,25969420,25972099,25973076,25973285,25979628 Gene ID= ENSG00000112343.10 TPM= 1.81 Transcript Type= NA chr6 25992662 26001775 25992662 26001775 + ENST00000606723.2@U91328.2 ENST00000606723.2 lincRNA 25992662,25997903 25992918,26001775 Gene ID= ENSG00000272462.2 TPM= 5.43 Transcript Type= lincRNA chr6 26087319 26098343 26087319 26098343 + ENST00000357618.9@HFE ENST00000357618.9 protein_coding 26087319,26090841,26091314,26092685,26093119,26094186 26087516,26091104,26091589,26092960,26093232,26098343 Gene ID= ENSG00000010704.18 TPM= 14.49 Transcript Type= protein_coding chr6 26124170 26139857 26124170 26139857 + transcript443.chr6.nnic@HIST1H2AC transcript443.chr6.nnic protein_coding 26124170,26127698,26138054 26124749,26127761,26139857 Gene ID= ENSG00000180573.9 TPM= 23.54 Transcript Type= NA chr6 26124172 26138955 26124172 26138955 + transcript444.chr6.nnic@HIST1H2AC transcript444.chr6.nnic protein_coding 26124172,26127698,26138054 26124633,26127761,26138955 Gene ID= ENSG00000180573.9 TPM= 2.72 Transcript Type= NA chr6 26124145 26139116 26124145 26139116 + ENST00000314088.6@HIST1H2AC ENST00000314088.6 protein_coding 26124145,26138054 26124749,26139116 Gene ID= ENSG00000180573.9 TPM= 42.56 Transcript Type= nonsense_mediated_decay chr6 26124203 26139084 26124203 26139084 + ENST00000602637.1@HIST1H2AC ENST00000602637.1 protein_coding 26124203,26138054 26124633,26139084 Gene ID= ENSG00000180573.9 TPM= 24.45 Transcript Type= protein_coding chr6 26158146 26171349 26158146 26171349 + ENST00000289316.2@HIST1H2BD ENST00000289316.2 protein_coding 26158146,26170975 26158559,26171349 Gene ID= ENSG00000158373.8 TPM= 2.72 Transcript Type= protein_coding chr6 26224202 26227471 26224202 26227471 + transcript448.chr6.nnic@HIST1H3E transcript448.chr6.nnic protein_coding 26224202,26224902,26227312 26224305,26227168,26227471 Gene ID= ENSG00000274750.2 TPM= 4.53 Transcript Type= NA chr6 26365228 26378318 26365228 26378318 + transcript454.chr6.nnic@BTN3A2 transcript454.chr6.nnic protein_coding 26365228,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797 26365352,26368050,26368267,26368912,26370603,26373037,26373296,26373413,26374373,26374798,26378318 Gene ID= ENSG00000186470.13 TPM= 2.91 Transcript Type= NA chr6 26365231 26378318 26365231 26378318 + transcript459.chr6.nnic@BTN3A2 transcript459.chr6.nnic protein_coding 26365231,26367990,26368178,26368721,26370322,26372897,26373276,26373387,26374327,26374771,26375797 26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378318 Gene ID= ENSG00000186470.13 TPM= 3.13 Transcript Type= NA chr6 26365197 26378318 26365197 26378318 + transcript462.chr6.nic@BTN3A2 transcript462.chr6.nic protein_coding 26365197,26367975,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797 26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378318 Gene ID= ENSG00000186470.13 TPM= 4.34 Transcript Type= NA chr6 26365159 26378320 26365159 26378320 + ENST00000508906.6@BTN3A2 ENST00000508906.6 protein_coding 26365159,26367990,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797 26365352,26368050,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378320 Gene ID= ENSG00000186470.13 TPM= 18.46 Transcript Type= protein_coding chr6 26365248 26378311 26365248 26378311 + transcript468.chr6.nic@BTN3A2 transcript468.chr6.nic protein_coding 26365248,26367990,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375515 26365352,26368050,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378311 Gene ID= ENSG00000186470.13 TPM= 3.45 Transcript Type= NA chr6 26365170 26378318 26365170 26378318 + transcript470.chr6.nic@BTN3A2 transcript470.chr6.nic protein_coding 26365170,26367990,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797 26365352,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378318 Gene ID= ENSG00000186470.13 TPM= 3.07 Transcript Type= NA chr6 26365231 26378318 26365231 26378318 + ENST00000356386.6@BTN3A2 ENST00000356386.6 protein_coding 26365231,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26376529 26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26378318 Gene ID= ENSG00000186470.13 TPM= 1.39 Transcript Type= protein_coding chr6 26365264 26376236 26365264 26376236 + ENST00000377708.6@BTN3A2 ENST00000377708.6 protein_coding 26365264,26367990,26368178,26368565,26370322,26372897,26373276,26373387,26374327,26374771,26375797 26365352,26368050,26368267,26368912,26370603,26373097,26373296,26373413,26374373,26374798,26376236 Gene ID= ENSG00000186470.13 TPM= 12.13 Transcript Type= protein_coding chr6 26383075 26394871 26383075 26394871 + transcript487.chr6.nic@BTN2A2 transcript487.chr6.nic protein_coding 26383075,26383792,26385015,26388013,26390005,26390687,26390803,26394298 26383181,26383915,26385362,26388294,26390211,26390707,26390829,26394871 Gene ID= ENSG00000124508.16 TPM= 2.72 Transcript Type= NA chr6 26383075 26394757 26383075 26394757 + transcript489.chr6.nnic@BTN2A2 transcript489.chr6.nnic protein_coding 26383075,26383792,26385015,26388199,26390005,26390687,26390803,26392375 26383181,26383915,26385362,26388294,26390211,26390707,26390829,26394757 Gene ID= ENSG00000124508.16 TPM= 1.97 Transcript Type= NA chr6 26383111 26394757 26383111 26394757 + transcript491.chr6.nic@BTN2A2 transcript491.chr6.nic protein_coding 26383111,26383792,26385015,26388013,26390005,26390687,26390803,26392375 26383299,26383915,26385362,26388294,26390211,26390707,26390829,26394757 Gene ID= ENSG00000124508.16 TPM= 5.81 Transcript Type= NA chr6 26383162 26394757 26383162 26394757 + transcript492.chr6.nnic@BTN2A2 transcript492.chr6.nnic protein_coding 26383162,26383792,26385015,26388199,26390005,26390687,26390803,26392375 26383299,26383915,26385362,26388294,26390211,26390707,26390829,26394757 Gene ID= ENSG00000124508.16 TPM= 1.97 Transcript Type= NA chr6 26383150 26394757 26383150 26394757 + transcript493.chr6.nic@BTN2A2 transcript493.chr6.nic protein_coding 26383150,26383792,26385015,26388013,26390005,26390687,26390803,26392375 26383244,26383915,26385362,26388294,26390211,26390707,26390829,26394757 Gene ID= ENSG00000124508.16 TPM= 2.19 Transcript Type= NA chr6 26383101 26394874 26383101 26394874 + ENST00000356709.8@BTN2A2 ENST00000356709.8 protein_coding 26383101,26383792,26385015,26388013,26390005,26390687,26390803,26392375 26383181,26383915,26385362,26388294,26390211,26390707,26390829,26394874 Gene ID= ENSG00000124508.16 TPM= 15.77 Transcript Type= protein_coding chr6 26383102 26394874 26383102 26394874 + ENST00000352867.6@BTN2A2 ENST00000352867.6 protein_coding 26383102,26383792,26388013,26390005,26390687,26390803,26392375 26383181,26383915,26388294,26390211,26390707,26390829,26394874 Gene ID= ENSG00000124508.16 TPM= 1.29 Transcript Type= protein_coding chr6 26402238 26415214 26402238 26415214 + transcript473.chr6.nic@BTN3A1 transcript473.chr6.nic protein_coding 26402238,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26412705 26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26415214 Gene ID= ENSG00000026950.16 TPM= 3.24 Transcript Type= NA chr6 26402237 26415216 26402237 26415216 + ENST00000289361.10@BTN3A1 ENST00000289361.10 protein_coding 26402237,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26413169 26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26415216 Gene ID= ENSG00000026950.16 TPM= 30.86 Transcript Type= protein_coding chr6 26402238 26415213 26402238 26415213 + transcript475.chr6.nnic@BTN3A1 transcript475.chr6.nnic protein_coding 26402238,26405372,26405909,26407671,26409533,26409894,26410006,26411109,26411555,26413647 26402412,26405648,26406256,26407952,26409733,26409914,26410032,26411135,26411581,26415213 Gene ID= ENSG00000026950.16 TPM= 2.04 Transcript Type= NA chr6 26402308 26415204 26402308 26415204 + ENST00000082468.11@BTN3A1 ENST00000082468.11 protein_coding 26402308,26405372,26405909,26407671,26409533,26409894,26411109,26411555,26413169 26402412,26405648,26406256,26407952,26409733,26410032,26411135,26411581,26415204 Gene ID= ENSG00000026950.16 TPM= 1.88 Transcript Type= retained_intron chr6 26440498 26453411 26440498 26453411 + transcript498.chr6.nnic@BTN3A3 transcript498.chr6.nnic protein_coding 26440498,26443382,26443570,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26450960 26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453411 Gene ID= ENSG00000111801.15 TPM= 3.62 Transcript Type= NA chr6 26440493 26453414 26440493 26453414 + transcript500.chr6.nic@BTN3A3 transcript500.chr6.nic protein_coding 26440493,26443382,26443641,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26451675 26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453414 Gene ID= ENSG00000111801.15 TPM= 3.02 Transcript Type= NA chr6 26440472 26453415 26440472 26453415 + ENST00000244519.6@BTN3A3 ENST00000244519.6 protein_coding 26440472,26443382,26443570,26443957,26445704,26448248,26448617,26448728,26449662,26450107,26451675 26440648,26443442,26443659,26444304,26445985,26448448,26448637,26448754,26449688,26450133,26453415 Gene ID= ENSG00000111801.15 TPM= 51.91 Transcript Type= protein_coding chr6 26457947 26469658 26457947 26469658 + transcript507.chr6.nic@BTN2A1 transcript507.chr6.nic protein_coding 26457947,26458607,26459481,26462797,26463244,26465953,26466062,26467948 26458142,26458718,26459828,26462897,26465406,26465973,26466088,26469658 Gene ID= ENSG00000112763.15 TPM= 1.81 Transcript Type= NA chr6 26457947 26469658 26457947 26469658 + transcript510.chr6.nnic@BTN2A1 transcript510.chr6.nnic protein_coding 26457947,26458607,26459481,26463244,26465218,26465953,26466062,26467948 26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469658 Gene ID= ENSG00000112763.15 TPM= 5.43 Transcript Type= NA chr6 26457951 26469658 26457951 26469658 + transcript511.chr6.nic@BTN2A1 transcript511.chr6.nic protein_coding 26457951,26459481,26462797,26463244,26465185,26465953,26466062,26467948 26458142,26459828,26462897,26463525,26465406,26465973,26466088,26469658 Gene ID= ENSG00000112763.15 TPM= 1.81 Transcript Type= NA chr6 26457947 26461512 26457947 26461512 + transcript515.chr6.nic@BTN2A1 transcript515.chr6.nic protein_coding 26457947,26458607,26459481 26458142,26458718,26461512 Gene ID= ENSG00000112763.15 TPM= 2.72 Transcript Type= NA chr6 26457925 26469637 26457925 26469637 + ENST00000312541.9@BTN2A1 ENST00000312541.9 protein_coding 26457925,26458607,26459481,26463244,26465185,26465953,26466062,26467948 26458142,26458718,26459828,26463525,26465406,26465973,26466088,26469637 Gene ID= ENSG00000112763.15 TPM= 13.58 Transcript Type= protein_coding chr6 26457922 26469602 26457922 26469602 + ENST00000377600.6@BTN2A1 ENST00000377600.6 protein_coding 26457922,26458607,26459481,26462797,26463244,26465185,26465953,26466062,26467948 26458142,26458718,26459828,26462897,26463525,26465406,26465973,26466088,26469602 Gene ID= ENSG00000112763.15 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr6 26538403 26546932 26538403 26546932 + transcript518.chr6.nnic@HMGN4 transcript518.chr6.nnic protein_coding 26538403,26539901,26545127 26538501,26540026,26546932 Gene ID= ENSG00000182952.4 TPM= 5.43 Transcript Type= NA chr6 26596952 26600744 26596952 26600744 + ENST00000274849.2@ABT1 ENST00000274849.2 protein_coding 26596952,26597914,26598265 26597223,26598110,26600744 Gene ID= ENSG00000146109.4 TPM= 33.51 Transcript Type= protein_coding chr6 26634383 26659752 26634383 26659752 - ENST00000415922.6@ZNF322 ENST00000415922.6 protein_coding 26659441,26658558,26643659,26634383 26659752,26658646,26643728,26638728 Gene ID= ENSG00000181315.10 TPM= 15.39 Transcript Type= protein_coding chr6 27357821 27375217 27357821 27375217 - transcript530.chr6.nnic@ZNF204P transcript530.chr6.nnic processed_pseudogene 27375131,27370136,27367517,27363179,27357821 27375217,27370224,27367612,27363302,27360221 Gene ID= ENSG00000204789.4 TPM= 1.81 Transcript Type= NA chr6 27357821 27375256 27357821 27375256 - transcript531.chr6.nnic@ZNF204P transcript531.chr6.nnic processed_pseudogene 27375194,27370136,27367517,27363179,27357821 27375256,27370224,27367612,27363302,27360221 Gene ID= ENSG00000204789.4 TPM= 3.62 Transcript Type= NA chr6 27388718 27403904 27388718 27403904 + ENST00000244576.8@ZNF391 ENST00000244576.8 protein_coding 27388718,27399442,27400293 27389075,27399550,27403904 Gene ID= ENSG00000124613.8 TPM= 2.72 Transcript Type= protein_coding chr6 27450747 27473086 27450747 27473086 - transcript538.chr6.nnic@ZNF184 transcript538.chr6.nnic protein_coding 27472729,27472288,27467853,27457283,27456826,27450747 27473086,27472433,27467920,27457409,27456921,27453260 Gene ID= ENSG00000096654.15 TPM= 3.62 Transcript Type= NA chr6 27450747 27473105 27450747 27473105 - transcript541.chr6.nic@ZNF184 transcript541.chr6.nic protein_coding 27472288,27467853,27457283,27456826,27450747 27473105,27467920,27457409,27456921,27453260 Gene ID= ENSG00000096654.15 TPM= 1.81 Transcript Type= NA chr6 27450743 27473118 27450743 27473118 - ENST00000211936.10@ZNF184 ENST00000211936.10 protein_coding 27472973,27472288,27467853,27457283,27456826,27450743 27473118,27472433,27467920,27457409,27456921,27453260 Gene ID= ENSG00000096654.15 TPM= 7.24 Transcript Type= protein_coding chr6 28078792 28081130 28078792 28081130 - ENST00000605945.1@AL121944.1 ENST00000605945.1 antisense_RNA 28080626,28078792 28081130,28078972 Gene ID= ENSG00000272009.1 TPM= 3.62 Transcript Type= antisense_RNA chr6 28122264 28136795 28122264 28136795 - transcript547.chr6.nnic@ZSCAN16-AS1 transcript547.chr6.nnic antisense_RNA 28136745,28123084,28122264 28136795,28123211,28122640 Gene ID= ENSG00000269293.2 TPM= 2.72 Transcript Type= NA chr6 28121798 28136866 28121798 28136866 - ENST00000602810.1@ZSCAN16-AS1 ENST00000602810.1 antisense_RNA 28136745,28121798 28136866,28123211 Gene ID= ENSG00000269293.2 TPM= 19.02 Transcript Type= antisense_RNA chr6 28124560 28130082 28124560 28130082 + ENST00000340487.4@ZSCAN16 ENST00000340487.4 protein_coding 28124560,28125413,28126783,28129430 28124677,28125830,28126921,28130082 Gene ID= ENSG00000196812.4 TPM= 1.81 Transcript Type= protein_coding chr6 28225292 28233482 28225292 28233482 + ENST00000531979.5@ZSCAN9 ENST00000531979.5 protein_coding 28225292,28227012,28227690,28232562 28225330,28227504,28227837,28233482 Gene ID= ENSG00000137185.11 TPM= 1.81 Transcript Type= protein_coding chr6 28244623 28252224 28244623 28252224 - ENST00000377294.2@ZKSCAN4 ENST00000377294.2 protein_coding 28251558,28249687,28248067,28246969,28244623 28252224,28249834,28248149,28247092,28245975 Gene ID= ENSG00000187626.8 TPM= 2.72 Transcript Type= protein_coding chr6 28267010 28278221 28267010 28278221 + ENST00000421553.6@ZSCAN26 ENST00000421553.6 protein_coding 28267010,28271854,28272670,28276195 28267213,28272339,28272787,28278221 Gene ID= ENSG00000197062.11 TPM= 12.68 Transcript Type= protein_coding chr6 28267198 28277530 28267198 28277530 + transcript563.chr6.nnic@ZSCAN26 transcript563.chr6.nnic protein_coding 28267198,28271854,28272670,28276195 28267384,28272339,28272787,28277530 Gene ID= ENSG00000197062.11 TPM= 1.81 Transcript Type= NA chr6 28267119 28278211 28267119 28278211 + transcript566.chr6.nic@ZSCAN26 transcript566.chr6.nic protein_coding 28267119,28271854,28276195 28267213,28272787,28278211 Gene ID= ENSG00000197062.11 TPM= 2.72 Transcript Type= NA chr6 28267058 28278201 28267058 28278201 + ENST00000316606.10@ZSCAN26 ENST00000316606.10 protein_coding 28267058,28271854,28272670,28276195 28267213,28271934,28272787,28278201 Gene ID= ENSG00000197062.11 TPM= 2.72 Transcript Type= protein_coding chr6 28267359 28278224 28267359 28278224 + ENST00000619937.4@ZSCAN26 ENST00000619937.4 protein_coding 28267359,28271854,28272670,28276195 28267453,28272339,28272787,28278224 Gene ID= ENSG00000197062.11 TPM= 3.62 Transcript Type= protein_coding chr6 28349914 28369177 28349914 28369177 + ENST00000252211.6@ZKSCAN3 ENST00000252211.6 protein_coding 28349914,28359525,28361324,28363303,28363692,28365426 28350067,28359988,28361471,28363385,28363815,28369177 Gene ID= ENSG00000189298.13 TPM= 1.81 Transcript Type= protein_coding chr6 28378822 28383436 28378822 28383436 - transcript577.chr6.nnic@ZSCAN12 transcript577.chr6.nnic protein_coding 28383329,28382191,28378822 28383436,28382609,28380871 Gene ID= ENSG00000158691.14 TPM= 1.81 Transcript Type= NA chr6 28903002 28923989 28903002 28923989 - ENST00000377199.3@TRIM27 ENST00000377199.3 protein_coding 28923213,28921892,28920012,28911696,28908973,28908808,28907236,28903002 28923989,28921987,28920242,28911718,28909088,28908840,28907262,28904665 Gene ID= ENSG00000204713.10 TPM= 88.14 Transcript Type= protein_coding chr6 28903005 28923961 28903005 28923961 - transcript590.chr6.nnic@TRIM27 transcript590.chr6.nnic protein_coding 28923213,28921892,28920012,28911696,28903005 28923961,28921987,28920242,28911718,28904665 Gene ID= ENSG00000204713.10 TPM= 3.02 Transcript Type= NA chr6 29002641 29005598 29002641 29005598 - transcript596.chr6.nnic@ZNF311 transcript596.chr6.nnic protein_coding 29004540,29003871,29002641 29005598,29004434,29003594 Gene ID= ENSG00000197935.6 TPM= 1.81 Transcript Type= NA chr6 29602230 29633090 29602230 29633090 - transcript598.chr6.nic@GABBR1 transcript598.chr6.nic protein_coding 29632850,29632301,29631396,29630522,29629087,29627486,29623890,29623305,29622104,29621752,29621101,29613243,29612551,29610924,29608601,29607102,29606897,29606391,29605569,29604860,29604494,29602230 29633090,29632385,29631599,29630643,29629107,29627646,29624024,29623475,29622205,29621817,29621292,29613485,29612614,29611001,29608733,29607218,29607004,29606484,29605696,29604988,29604637,29603716 Gene ID= ENSG00000204681.10 TPM= 12.68 Transcript Type= NA chr6 29722775 29726526 29722775 29726526 + ENST00000376861.5@HLA-F ENST00000376861.5 protein_coding 29722775,29723306,29723658,29724173,29725031,29725447,29726011,29726403 29723000,29723527,29723927,29724448,29725306,29725563,29726043,29726526 Gene ID= ENSG00000204642.13 TPM= 21.73 Transcript Type= protein_coding chr6 29723378 29726495 29723378 29726495 + transcript611.chr6.nic@HLA-F transcript611.chr6.nic protein_coding 29723378,29725031,29725447 29724448,29725306,29726495 Gene ID= ENSG00000204642.13 TPM= 2.72 Transcript Type= NA chr6 29887465 29891079 29887465 29891079 + transcript658.chr6.nnic@HLA-H transcript658.chr6.nnic unprocessed_pseudogene 29887465,29889707,29890264,29890439,29890653 29889604,29889823,29890296,29890485,29891079 Gene ID= ENSG00000206341.7 TPM= 4.53 Transcript Type= NA chr6 29899390 29977332 29899390 29977332 - transcript666.chr6.nnic@AL671277.1 transcript666.chr6.nnic unprocessed_pseudogene 29976603,29928439,29927384,29899390 29977332,29928546,29927599,29900944 Gene ID= ENSG00000227766.1 TPM= 1.81 Transcript Type= NA chr6 29925859 29929725 29925859 29929725 + transcript616.chr6.nnic@HLA-K transcript616.chr6.nnic unprocessed_pseudogene 29925859,29925924,29926375,29926660,29928051,29928457,29929019,29929186,29929402 29925885,29925970,29926530,29927452,29928328,29928573,29929045,29929233,29929725 Gene ID= ENSG00000230795.3 TPM= 1.81 Transcript Type= NA chr6 29941260 29945884 29941260 29945884 + ENST00000396634.5@HLA-A ENST00000396634.5 protein_coding 29941260,29941966,29942404,29942757,29943268,29944122,29944500,29945059,29945234,29945451 29941319,29942096,29942626,29943026,29943543,29944397,29944616,29945091,29945281,29945884 Gene ID= ENSG00000206503.12 TPM= 3066.07 Transcript Type= protein_coding chr6 29942552 29945884 29942552 29945884 + ENST00000495183.5@HLA-A ENST00000495183.5 protein_coding 29942552,29942757,29944122,29944500,29945063,29945234,29945451 29942626,29943543,29944397,29944616,29945091,29945281,29945884 Gene ID= ENSG00000206503.12 TPM= 2.72 Transcript Type= retained_intron chr6 29899390 29977332 29899390 29977332 - transcript697.chr6.nnic@MICD transcript697.chr6.nnic unprocessed_pseudogene 29976603,29928439,29927384,29899390 29977332,29928546,29927599,29900944 Gene ID= ENSG00000229390.1 TPM= 1.81 Transcript Type= NA chr6 30006437 30009855 30006437 30009855 + transcript685.chr6.nic@HLA-J transcript685.chr6.nic transcribed_unprocessed_pseudogene 30006437,30006800,30008189,30008585,30009038,30009320,30009535 30006669,30007593,30008462,30008701,30009177,30009367,30009855 Gene ID= ENSG00000204622.11 TPM= 2.11 Transcript Type= NA chr6 30006188 30009968 30006188 30009968 + transcript689.chr6.nic@HLA-J transcript689.chr6.nic transcribed_unprocessed_pseudogene 30006188,30008189,30008585,30009038,30009320,30009535 30007593,30008462,30008701,30009177,30009367,30009968 Gene ID= ENSG00000204622.11 TPM= 7.54 Transcript Type= NA chr6 30006188 30009968 30006188 30009968 + transcript694.chr6.nic@HLA-J transcript694.chr6.nic transcribed_unprocessed_pseudogene 30006188,30008189,30009038,30009320,30009535 30007593,30008462,30009177,30009367,30009968 Gene ID= ENSG00000204622.11 TPM= 1.81 Transcript Type= NA chr6 30006246 30009968 30006246 30009968 + transcript695.chr6.nic@HLA-J transcript695.chr6.nic transcribed_unprocessed_pseudogene 30006246,30008585,30009038,30009320,30009535 30008462,30008701,30009177,30009367,30009968 Gene ID= ENSG00000204622.11 TPM= 3.02 Transcript Type= NA chr6 30006450 30009855 30006450 30009855 + transcript699.chr6.nic@HLA-J transcript699.chr6.nic transcribed_unprocessed_pseudogene 30006450,30009038,30009320,30009535 30008462,30009177,30009367,30009855 Gene ID= ENSG00000204622.11 TPM= 2.72 Transcript Type= NA chr6 30061259 30064909 30061259 30064909 + ENST00000359374.8@ZNRD1 ENST00000359374.8 protein_coding 30061259,30061515,30061917,30062224,30064673 30061398,30061669,30062017,30062333,30064909 Gene ID= ENSG00000066379.14 TPM= 8.15 Transcript Type= protein_coding chr6 30061254 30064909 30061254 30064909 + ENST00000332435.9@ZNRD1 ENST00000332435.9 protein_coding 30061254,30061917,30062224,30064673 30061669,30062017,30062333,30064909 Gene ID= ENSG00000066379.14 TPM= 9.96 Transcript Type= protein_coding chr6 30067198 30070327 30067198 30070327 + transcript708.chr6.nnic@PPP1R11 transcript708.chr6.nnic protein_coding 30067198,30068590,30069104,30069405 30067479,30068698,30069195,30070327 Gene ID= ENSG00000204619.7 TPM= 1.81 Transcript Type= NA chr6 30067216 30070339 30067216 30070339 + transcript712.chr6.nnic@PPP1R11 transcript712.chr6.nnic protein_coding 30067216,30068590,30069104 30067357,30068698,30070339 Gene ID= ENSG00000204619.7 TPM= 4.98 Transcript Type= NA chr6 30067205 30070333 30067205 30070333 + ENST00000376769.6@PPP1R11 ENST00000376769.6 protein_coding 30067205,30068279,30068590,30069104 30067479,30068353,30068698,30070333 Gene ID= ENSG00000204619.7 TPM= 4.98 Transcript Type= protein_coding chr6 30070266 30075887 30070266 30075887 - ENST00000244360.6@RNF39 ENST00000244360.6 protein_coding 30075223,30073456,30073157,30070266 30075887,30073478,30073248,30071691 Gene ID= ENSG00000204618.8 TPM= 1.81 Transcript Type= protein_coding chr6 30184448 30213444 30184448 30213444 - transcript714.chr6.nic@TRIM26 transcript714.chr6.nic protein_coding 30213305,30204656,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184448 30213444,30204765,30201138,30199153,30198524,30196746,30190035,30189533,30189199,30186558 Gene ID= ENSG00000234127.8 TPM= 18.84 Transcript Type= NA chr6 30184448 30213391 30184448 30213391 - transcript717.chr6.nnic@TRIM26 transcript717.chr6.nnic protein_coding 30213305,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184448 30213391,30201123,30199153,30198524,30196746,30190035,30189533,30189199,30186558 Gene ID= ENSG00000234127.8 TPM= 2.54 Transcript Type= NA chr6 30184448 30213444 30184448 30213444 - transcript720.chr6.nnic@TRIM26 transcript720.chr6.nnic protein_coding 30213305,30204656,30201035,30198666,30198429,30190013,30189418,30189167,30184448 30213444,30204765,30201138,30199153,30198524,30190035,30189533,30189199,30186558 Gene ID= ENSG00000234127.8 TPM= 2.54 Transcript Type= NA chr6 30184455 30213427 30184455 30213427 - ENST00000453195.5@TRIM26 ENST00000453195.5 protein_coding 30213305,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455 30213427,30201138,30199153,30198524,30196746,30190035,30189533,30189199,30186558 Gene ID= ENSG00000234127.8 TPM= 8.87 Transcript Type= protein_coding chr6 30184455 30213366 30184455 30213366 - ENST00000454678.6@TRIM26 ENST00000454678.6 protein_coding 30213305,30204656,30201035,30198666,30198429,30196516,30190013,30189418,30189167,30184455 30213366,30204765,30201138,30199264,30198524,30196746,30190035,30189533,30189199,30186558 Gene ID= ENSG00000234127.8 TPM= 2.54 Transcript Type= protein_coding chr6 30326890 30343728 30326890 30343728 + transcript733.chr6.nic@TRIM39 transcript733.chr6.nic protein_coding 30326890,30328909,30329311,30330781,30335745,30339908,30340505,30341712 30326995,30329041,30329770,30330876,30335975,30339930,30340620,30343728 Gene ID= ENSG00000204599.14 TPM= 7.47 Transcript Type= NA chr6 30326922 30336442 30326922 30336442 + transcript738.chr6.nic@TRIM39 transcript738.chr6.nic protein_coding 30326922,30328889,30329311,30330781,30335745 30326995,30329041,30329770,30330876,30336442 Gene ID= ENSG00000204599.14 TPM= 1.81 Transcript Type= NA chr6 30326844 30343729 30326844 30343729 + ENST00000396551.7@TRIM39 ENST00000396551.7 protein_coding 30326844,30328889,30329311,30330781,30335745,30339908,30340505,30341712 30326995,30329041,30329770,30330876,30335975,30339930,30340620,30343729 Gene ID= ENSG00000204599.14 TPM= 17.43 Transcript Type= protein_coding chr6 30326920 30343729 30326920 30343729 + ENST00000396548.5@TRIM39 ENST00000396548.5 protein_coding 30326920,30327652,30328909,30329311,30330781,30335745,30339908,30340505,30341712 30326995,30327696,30329041,30329770,30330876,30335975,30339930,30340620,30343729 Gene ID= ENSG00000204599.14 TPM= 2.04 Transcript Type= protein_coding chr6 30345148 30346859 30345148 30346859 + transcript747.chr6.nnic@TRIM39-RPP21 transcript747.chr6.nnic protein_coding 30345148,30345322,30345491,30346432,30346713 30345228,30345398,30345573,30346557,30346859 Gene ID= ENSG00000248167.7 TPM= 1.81 Transcript Type= NA chr6 30345155 30346857 30345155 30346857 + ENST00000473266.1@RPP21 ENST00000473266.1 protein_coding 30345155,30345298,30346432,30346713 30345228,30345573,30346557,30346857 Gene ID= ENSG00000241370.5 TPM= 1.81 Transcript Type= retained_intron chr6 30345169 30346857 30345169 30346857 + ENST00000436442.2@RPP21 ENST00000436442.2 protein_coding 30345169,30345298,30345491,30346432,30346713 30345228,30345398,30345573,30346564,30346857 Gene ID= ENSG00000241370.5 TPM= 2.72 Transcript Type= protein_coding chr6 30489467 30494205 30489467 30494205 + ENST00000376630.4@HLA-E ENST00000376630.4 protein_coding 30489467,30489726,30490240,30491137,30491537,30492404,30492541,30492749 30489595,30489995,30490515,30491412,30491653,30492436,30492583,30494205 Gene ID= ENSG00000204592.8 TPM= 750.7 Transcript Type= protein_coding chr6 30544351 30557231 30544351 30557231 - transcript776.chr6.nnic@GNL1 transcript776.chr6.nnic protein_coding 30556953,30556131,30555555,30555055,30554764,30554575,30553350,30553084,30552467,30547352,30547112,30546696,30544351 30557231,30556803,30555720,30555191,30554915,30554646,30553557,30553179,30552661,30547530,30547274,30546836,30546313 Gene ID= ENSG00000204590.12 TPM= 84.67 Transcript Type= NA chr6 30545948 30556103 30545948 30556103 - transcript779.chr6.nic@GNL1 transcript779.chr6.nic protein_coding 30555555,30555055,30554764,30554575,30553350,30553084,30552467,30547352,30547112,30546696,30545948 30556103,30555191,30554915,30554646,30553557,30553179,30552661,30547530,30547274,30546836,30546313 Gene ID= ENSG00000204590.12 TPM= 12.22 Transcript Type= NA chr6 30571000 30591530 30571000 30591530 + transcript770.chr6.nnic@ABCF1 transcript770.chr6.nnic protein_coding 30571000,30571456,30577409,30577818,30578073,30578348,30578470,30579931,30580406,30582394,30583066,30583608,30583805,30584192,30584418,30585260,30585558,30585879,30586134,30586474,30586641,30589688,30589806,30590149,30590306,30590535 30571051,30571560,30577455,30577913,30578202,30578385,30578577,30580005,30580519,30582507,30583188,30583708,30583890,30584331,30584566,30585343,30585682,30585991,30586305,30586548,30586711,30589720,30589974,30590213,30590378,30591530 Gene ID= ENSG00000204574.12 TPM= 26.87 Transcript Type= NA chr6 30571376 30591532 30571376 30591532 + ENST00000326195.12@ABCF1 ENST00000326195.12 protein_coding 30571376,30577409,30577818,30578076,30578348,30578470,30579931,30580406,30582394,30583066,30583608,30583805,30584192,30584418,30585260,30585558,30585879,30586134,30586474,30586641,30589688,30589806,30590149,30590306,30590535 30571560,30577455,30577913,30578202,30578385,30578577,30580005,30580519,30582507,30583188,30583708,30583890,30584331,30584566,30585343,30585682,30585991,30586305,30586548,30586711,30589720,30589974,30590213,30590378,30591532 Gene ID= ENSG00000204574.12 TPM= 44.07 Transcript Type= protein_coding chr6 30571379 30591530 30571379 30591530 + transcript773.chr6.nic@ABCF1 transcript773.chr6.nic protein_coding 30571379,30577818,30578073,30578348,30578470,30579931,30580406,30582394,30583066,30583608,30583805,30584192,30584418,30585260,30585558,30585879,30586134,30586474,30586641,30589688,30589806,30590149,30590306,30590535 30571560,30577913,30578202,30578385,30578577,30580005,30580519,30582507,30583188,30583708,30583890,30584331,30584566,30585343,30585682,30585991,30586305,30586548,30586711,30589720,30589974,30590213,30590378,30591530 Gene ID= ENSG00000204574.12 TPM= 4.23 Transcript Type= NA chr6 30600400 30617244 30600400 30617244 - ENST00000376511.6@PPP1R10 ENST00000376511.6 protein_coding 30617224,30616478,30609838,30609077,30608779,30607840,30606779,30606468,30606138,30605923,30604994,30604588,30604353,30604008,30603780,30603472,30603210,30602846,30601936,30600400 30617244,30616998,30609955,30609163,30608914,30607891,30606856,30606641,30606243,30606035,30605094,30604735,30604511,30604254,30603843,30603666,30603285,30602959,30602691,30601658 Gene ID= ENSG00000204569.9 TPM= 33.51 Transcript Type= protein_coding chr6 30617709 30626395 30617709 30626395 + ENST00000259873.4@MRPS18B ENST00000259873.4 protein_coding 30617709,30619493,30619709,30619921,30622832,30624883,30625502 30617943,30619601,30619806,30619989,30622898,30624942,30626395 Gene ID= ENSG00000204568.11 TPM= 128.13 Transcript Type= protein_coding chr6 30617811 30626396 30617811 30626396 + transcript789.chr6.nnic@MRPS18B transcript789.chr6.nnic protein_coding 30617811,30619493,30619709,30619921,30624883,30625502 30617943,30619601,30619806,30619989,30624942,30626396 Gene ID= ENSG00000204568.11 TPM= 9.51 Transcript Type= NA chr6 30626856 30646823 30626856 30646823 + ENST00000376485.8@ATAT1 ENST00000376485.8 protein_coding 30626856,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30642768,30645895,30646067,30646469 30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30643011,30645974,30646109,30646823 Gene ID= ENSG00000137343.17 TPM= 5.43 Transcript Type= protein_coding chr6 30626893 30646823 30626893 30646823 + ENST00000468713.5@ATAT1 ENST00000468713.5 protein_coding 30626893,30627460,30627636,30627851,30628032,30628329,30640377,30640535,30642176,30645895,30646067,30646469 30626992,30627520,30627727,30627911,30628145,30628430,30640422,30640603,30642247,30645974,30646109,30646823 Gene ID= ENSG00000137343.17 TPM= 1.81 Transcript Type= processed_transcript chr6 30647039 30653209 30647039 30653209 + ENST00000293604.10@C6orf136 ENST00000293604.10 protein_coding 30647039,30649558,30650994,30651266,30652648,30652802 30647846,30649959,30651082,30651466,30652717,30653209 Gene ID= ENSG00000204564.11 TPM= 2.26 Transcript Type= protein_coding chr6 30647073 30653210 30647073 30653210 + ENST00000376473.9@C6orf136 ENST00000376473.9 protein_coding 30647073,30649558,30650994,30651266,30652648,30652802 30647303,30649959,30651082,30651466,30652717,30653210 Gene ID= ENSG00000204564.11 TPM= 10.41 Transcript Type= protein_coding chr6 30653128 30673051 30653128 30673051 - transcript797.chr6.nnic@DHX16 transcript797.chr6.nnic protein_coding 30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30661756,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653128 30673051,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30662431,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370 Gene ID= ENSG00000204560.9 TPM= 5.43 Transcript Type= NA chr6 30653119 30673037 30653119 30673037 - ENST00000376442.7@DHX16 ENST00000376442.7 protein_coding 30672635,30671036,30670790,30670410,30665479,30665071,30664801,30662911,30662627,30660032,30659736,30659472,30656952,30656597,30656391,30656198,30655435,30655175,30654706,30653119 30673037,30671274,30670952,30670466,30665733,30665274,30664992,30663021,30662742,30660242,30659834,30659624,30657092,30656759,30656509,30656265,30655597,30655336,30654879,30653370 Gene ID= ENSG00000204560.9 TPM= 81.5 Transcript Type= protein_coding chr6 30676389 30687216 30676389 30687216 - ENST00000399199.7@PPP1R18 ENST00000399199.7 protein_coding 30687114,30684408,30679179,30676389 30687216,30686046,30679389,30677288 Gene ID= ENSG00000146112.11 TPM= 15.39 Transcript Type= protein_coding chr6 30676389 30687895 30676389 30687895 - ENST00000274853.7@PPP1R18 ENST00000274853.7 protein_coding 30684408,30679179,30676389 30687895,30679389,30677288 Gene ID= ENSG00000146112.11 TPM= 2.72 Transcript Type= protein_coding chr6 30676389 30687158 30676389 30687158 - ENST00000467662.5@PPP1R18 ENST00000467662.5 protein_coding 30687114,30679179,30676389 30687158,30679389,30677288 Gene ID= ENSG00000146112.11 TPM= 2.72 Transcript Type= processed_transcript chr6 30688047 30690976 30688047 30690976 - ENST00000376420.9@NRM ENST00000376420.9 protein_coding 30690842,30690047,30688047 30690976,30690243,30688942 Gene ID= ENSG00000137404.14 TPM= 1.81 Transcript Type= protein_coding chr6 30699807 30717889 30699807 30717889 - ENST00000376406.7@MDC1 ENST00000376406.7 protein_coding 30717245,30715040,30713803,30713648,30711874,30711667,30711412,30707566,30707384,30703621,30703418,30703104,30702752,30702553,30699807 30717889,30715178,30714183,30713717,30713354,30711726,30711504,30708357,30707454,30706098,30703537,30703286,30702877,30702663,30700632 Gene ID= ENSG00000137337.14 TPM= 2.72 Transcript Type= protein_coding chr6 30720201 30725426 30720201 30725426 + ENST00000327892.12@TUBB ENST00000327892.12 protein_coding 30720201,30722537,30722918,30723340 30720563,30722645,30723028,30725426 Gene ID= ENSG00000196230.12 TPM= 517.52 Transcript Type= protein_coding chr6 30721574 30725426 30721574 30725426 + ENST00000330914.7@TUBB ENST00000330914.7 protein_coding 30721574,30722537,30722918,30723340 30721898,30722645,30723028,30725426 Gene ID= ENSG00000196230.12 TPM= 17.66 Transcript Type= protein_coding chr6 30727695 30742858 30727695 30742858 - transcript816.chr6.nnic@FLOT1 transcript816.chr6.nnic protein_coding 30742706,30742527,30742147,30741792,30741614,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727695 30742858,30742571,30742203,30741867,30741704,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145 Gene ID= ENSG00000137312.14 TPM= 63.42 Transcript Type= NA chr6 30727695 30742525 30727695 30742525 - transcript823.chr6.nic@FLOT1 transcript823.chr6.nic protein_coding 30742467,30742147,30741792,30741614,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727695 30742525,30742203,30741867,30741704,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145 Gene ID= ENSG00000137312.14 TPM= 29.91 Transcript Type= NA chr6 30727709 30742733 30727709 30742733 - ENST00000376389.7@FLOT1 ENST00000376389.7 protein_coding 30742527,30742147,30741792,30741614,30741190,30740679,30740496,30740158,30730919,30730682,30730428,30730022,30727709 30742733,30742203,30741867,30741704,30741333,30740798,30740591,30740310,30731100,30730727,30730565,30730186,30728145 Gene ID= ENSG00000137312.14 TPM= 869.35 Transcript Type= protein_coding chr6 30743199 30744554 30743199 30744554 - ENST00000259874.5@IER3 ENST00000259874.5 protein_coding 30744309,30743199 30744554,30744196 Gene ID= ENSG00000137331.11 TPM= 26.26 Transcript Type= protein_coding chr6 30882918 30900976 30882918 30900976 + transcript883.chr6.nic@DDR1 transcript883.chr6.nic protein_coding 30882918,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30895404,30896621,30897014,30897379,30898073,30898888,30899156 30882983,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30895514,30896865,30897141,30897597,30898307,30899037,30900976 Gene ID= ENSG00000204580.13 TPM= 22.22 Transcript Type= NA chr6 30883122 30900976 30883122 30900976 + transcript898.chr6.nic@DDR1 transcript898.chr6.nic protein_coding 30883122,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156 30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900976 Gene ID= ENSG00000204580.13 TPM= 49.15 Transcript Type= NA chr6 30883149 30900976 30883149 30900976 + transcript899.chr6.nic@DDR1 transcript899.chr6.nic protein_coding 30883149,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30896621,30897014,30897379,30898073,30898888,30899156 30883241,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30896865,30897141,30897597,30898307,30899037,30900976 Gene ID= ENSG00000204580.13 TPM= 11.36 Transcript Type= NA chr6 30884458 30900153 30884458 30900153 + ENST00000376568.7@DDR1 ENST00000376568.7 protein_coding 30884458,30888688,30888908,30889202,30890973,30891380,30892002,30892296,30893068,30893272,30894506,30895404,30896621,30897014,30897379,30898073,30898888,30899156 30884710,30888814,30889010,30889430,30891120,30891479,30892188,30892542,30893163,30893423,30894671,30895514,30896865,30897141,30897597,30898307,30899037,30900153 Gene ID= ENSG00000204580.13 TPM= 53.57 Transcript Type= protein_coding chr6 30908184 30914106 30908184 30914106 + ENST00000259895.8@GTF2H4 ENST00000259895.8 protein_coding 30908184,30909034,30909435,30909932,30910665,30910853,30911158,30911431,30911684,30912014,30912328,30913110,30913309,30913811 30908403,30909173,30909539,30910063,30910761,30910941,30911269,30911499,30911767,30912146,30912458,30913157,30913387,30914106 Gene ID= ENSG00000213780.10 TPM= 1.81 Transcript Type= protein_coding chr6 30914218 30926458 30914218 30926458 + transcript904.chr6.nic@VARS2 transcript904.chr6.nic protein_coding 30914218,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109 30914344,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926458 Gene ID= ENSG00000137411.16 TPM= 65.65 Transcript Type= NA chr6 30914220 30926456 30914220 30926456 + ENST00000625423.2@VARS2 ENST00000625423.2 protein_coding 30914220,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109 30914344,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926456 Gene ID= ENSG00000137411.16 TPM= 10.41 Transcript Type= protein_coding chr6 30914331 30926413 30914331 30926413 + ENST00000541562.5@VARS2 ENST00000541562.5 protein_coding 30914331,30914805,30915156,30915355,30915746,30915981,30916152,30916878,30917105,30917695,30918827,30919758,30920089,30920333,30920668,30921065,30921230,30921589,30921925,30922116,30922450,30922706,30922898,30923104,30923353,30924354,30925274,30925544,30925880,30926109 30914469,30915037,30915237,30915455,30915867,30916047,30916249,30916959,30917224,30917806,30918915,30919848,30920216,30920436,30920749,30921141,30921305,30921691,30921995,30922241,30922554,30922774,30922976,30923231,30923505,30924560,30925385,30925719,30926008,30926413 Gene ID= ENSG00000137411.16 TPM= 15.39 Transcript Type= protein_coding chr6 31142438 31158232 31142438 31158232 - transcript911.chr6.nnic@CCHCR1 transcript911.chr6.nnic protein_coding 31158167,31157023,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142438 31158232,31157089,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143092,31142716 Gene ID= ENSG00000204536.13 TPM= 1.81 Transcript Type= NA chr6 31142439 31158238 31142439 31158238 - ENST00000376266.9@CCHCR1 ENST00000376266.9 protein_coding 31158167,31157023,31156731,31154496,31150959,31150725,31150455,31150066,31148618,31148405,31145696,31145448,31145166,31144885,31144687,31143262,31142963,31142439 31158238,31157089,31156944,31154799,31151122,31150860,31150565,31150215,31148728,31148511,31145808,31145493,31145302,31145073,31144788,31143413,31143134,31142716 Gene ID= ENSG00000204536.13 TPM= 12.68 Transcript Type= protein_coding chr6 31158520 31164214 31158520 31164214 + transcript915.chr6.nnic@TCF19 transcript915.chr6.nnic protein_coding 31158520,31158897,31159143,31161447,31162477 31158722,31159035,31159707,31162005,31164214 Gene ID= ENSG00000137310.11 TPM= 3.62 Transcript Type= NA chr6 31158542 31164215 31158542 31164215 + ENST00000376257.7@TCF19 ENST00000376257.7 protein_coding 31158542,31158897,31161447,31162477 31158722,31159707,31162005,31164215 Gene ID= ENSG00000137310.11 TPM= 3.62 Transcript Type= protein_coding chr6 31268749 31272086 31268749 31272086 - ENST00000376228.9@HLA-C ENST00000376228.9 protein_coding 31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749 31272086,31271868,31271348,31270485,31270085,31269525,31269385,31269173 Gene ID= ENSG00000204525.16 TPM= 1279.66 Transcript Type= protein_coding chr6 31268749 31272050 31268749 31272050 - ENST00000487245.5@HLA-C ENST00000487245.5 protein_coding 31271073,31270210,31269966,31269493,31269338,31268749 31272050,31270485,31270085,31269525,31269385,31269173 Gene ID= ENSG00000204525.16 TPM= 17.33 Transcript Type= retained_intron chr6 31268749 31272086 31268749 31272086 - ENST00000383329.7@HLA-C ENST00000383329.7 protein_coding 31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749 31272086,31271868,31271348,31270485,31270085,31269543,31269385,31269173 Gene ID= ENSG00000204525.16 TPM= 3.95 Transcript Type= protein_coding chr6 31268749 31272105 31268749 31272105 - ENST00000376237.8@HLA-C ENST00000376237.8 protein_coding 31271999,31271599,31271073,31270210,31269966,31269493,31269338,31268749 31272105,31271868,31271331,31270485,31270085,31269525,31269385,31269173 Gene ID= ENSG00000204525.16 TPM= 10.69 Transcript Type= nonsense_mediated_decay chr6 31353872 31357187 31353872 31357187 - ENST00000412585.6@HLA-B ENST00000412585.6 protein_coding 31357086,31356688,31356167,31355317,31355107,31354633,31354479,31353872 31357187,31356957,31356442,31355592,31355223,31354665,31354526,31354296 Gene ID= ENSG00000234745.10 TPM= 1124.69 Transcript Type= protein_coding chr6 31399784 31415313 31399784 31415313 + ENST00000616296.4@MICA ENST00000616296.4 protein_coding 31399784,31410543,31411072,31411947,31412325,31415012 31400783,31410797,31411359,31412225,31412460,31415313 Gene ID= ENSG00000204520.12 TPM= 3.17 Transcript Type= protein_coding chr6 31403579 31415315 31403579 31415315 + ENST00000449934.6@MICA ENST00000449934.6 protein_coding 31403579,31410543,31411072,31411947,31412325,31415012 31403702,31410797,31411359,31412225,31412460,31415315 Gene ID= ENSG00000204520.12 TPM= 16.75 Transcript Type= protein_coding chr6 31530219 31541987 31530219 31541987 - transcript955.chr6.nic@DDX39B transcript955.chr6.nic protein_coding 31541950,31541153,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219 31541987,31541327,31540664,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450 Gene ID= ENSG00000198563.13 TPM= 8.54 Transcript Type= NA chr6 31530219 31542448 31530219 31542448 - ENST00000458640.5@DDX39B ENST00000458640.5 protein_coding 31541950,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219 31542448,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450 Gene ID= ENSG00000198563.13 TPM= 113.58 Transcript Type= protein_coding chr6 31530219 31541951 31530219 31541951 - transcript960.chr6.nic@DDX39B transcript960.chr6.nic protein_coding 31541634,31540322,31539147,31538763,31536500,31535367,31532780,31531296,31531053,31530779,31530219 31541951,31540534,31539274,31538855,31536683,31535485,31532911,31531405,31531197,31530926,31530450 Gene ID= ENSG00000198563.13 TPM= 8.54 Transcript Type= NA chr6 31530219 31542017 31530219 31542017 - ENST00000462256.5@DDX39B ENST00000462256.5 protein_coding 31541950,31540322,31539147,31538763,31536500,31532780,31531296,31531053,31530779,31530219 31542017,31540534,31539274,31538855,31536683,31535485,31531405,31531197,31530926,31530450 Gene ID= ENSG00000198563.13 TPM= 4.98 Transcript Type= retained_intron chr6 31546870 31558829 31546870 31558829 + ENST00000376146.8@NFKBIL1 ENST00000376146.8 protein_coding 31546870,31548163,31557628,31558022 31546973,31548439,31557849,31558829 Gene ID= ENSG00000204498.10 TPM= 1.2 Transcript Type= protein_coding chr6 31547581 31558829 31547581 31558829 + ENST00000376148.8@NFKBIL1 ENST00000376148.8 protein_coding 31547581,31548163,31557628,31558022 31547751,31548439,31557849,31558829 Gene ID= ENSG00000204498.10 TPM= 20.22 Transcript Type= protein_coding chr6 31547613 31558829 31547613 31558829 + ENST00000376145.8@NFKBIL1 ENST00000376145.8 protein_coding 31547613,31548163,31557628,31558022 31547751,31548439,31557804,31558829 Gene ID= ENSG00000204498.10 TPM= 6.64 Transcript Type= protein_coding chr6 31580555 31582425 31580555 31582425 - ENST00000429299.2@LTB ENST00000429299.2 protein_coding 31582256,31581814,31581559,31580555 31582425,31581859,31581630,31581163 Gene ID= ENSG00000227507.2 TPM= 2.72 Transcript Type= protein_coding chr6 31586179 31588909 31586179 31588909 + ENST00000438075.6@LST1 ENST00000438075.6 protein_coding 31586179,31587200,31587641,31587944,31588518 31586315,31587318,31587733,31587966,31588909 Gene ID= ENSG00000204482.10 TPM= 2.17 Transcript Type= protein_coding chr6 31586124 31588909 31586124 31588909 + ENST00000418507.6@LST1 ENST00000418507.6 protein_coding 31586124,31587200,31587944,31588518 31586315,31587318,31587966,31588909 Gene ID= ENSG00000204482.10 TPM= 3.08 Transcript Type= protein_coding chr6 31586984 31588908 31586984 31588908 + transcript982.chr6.nnic@LST1 transcript982.chr6.nnic protein_coding 31586984,31587200,31588563 31587120,31587318,31588908 Gene ID= ENSG00000204482.10 TPM= 2.17 Transcript Type= NA chr6 31586217 31588909 31586217 31588909 + ENST00000376099.5@LST1 ENST00000376099.5 protein_coding 31586217,31587200,31588518 31586315,31587318,31588909 Gene ID= ENSG00000204482.10 TPM= 3.98 Transcript Type= protein_coding chr6 31586217 31588909 31586217 31588909 + ENST00000376096.5@LST1 ENST00000376096.5 protein_coding 31586217,31587200,31588563 31586315,31587318,31588909 Gene ID= ENSG00000204482.10 TPM= 4.89 Transcript Type= protein_coding chr6 31615252 31617024 31615252 31617024 + transcript984.chr6.nnic@AIF1 transcript984.chr6.nnic protein_coding 31615252,31615521,31615670,31616022,31616344,31616816 31615354,31615582,31615736,31616145,31616506,31617024 Gene ID= ENSG00000204472.12 TPM= 4.53 Transcript Type= NA chr6 31615220 31617024 31615220 31617024 + transcript986.chr6.nnic@AIF1 transcript986.chr6.nnic protein_coding 31615220,31615521,31615670,31616022,31616344,31616816 31615293,31615582,31615736,31616145,31616506,31617024 Gene ID= ENSG00000204472.12 TPM= 1.81 Transcript Type= NA chr6 31615184 31617021 31615184 31617021 + ENST00000376059.7@AIF1 ENST00000376059.7 protein_coding 31615184,31615521,31615670,31616104,31616344,31616816 31615354,31615582,31615736,31616145,31616506,31617021 Gene ID= ENSG00000204472.12 TPM= 51.16 Transcript Type= protein_coding chr6 31615227 31617021 31615227 31617021 + ENST00000337917.11@AIF1 ENST00000337917.11 protein_coding 31615227,31615521,31615670,31616104,31616344,31616816 31615293,31615582,31615736,31616145,31616506,31617021 Gene ID= ENSG00000204472.12 TPM= 11.32 Transcript Type= protein_coding chr6 31615280 31617021 31615280 31617021 + ENST00000466820.1@AIF1 ENST00000466820.1 protein_coding 31615280,31615521,31615670,31616816 31615354,31615582,31616506,31617021 Gene ID= ENSG00000204472.12 TPM= 1.81 Transcript Type= retained_intron chr6 31615991 31617021 31615991 31617021 + ENST00000376049.4@AIF1 ENST00000376049.4 protein_coding 31615991,31616344,31616816 31616145,31616506,31617021 Gene ID= ENSG00000204472.12 TPM= 1.81 Transcript Type= protein_coding chr6 31639029 31652661 31639029 31652661 - transcript999.chr6.nic@BAG6 transcript999.chr6.nic protein_coding 31652400,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644307,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639029 31652661,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644414,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226 Gene ID= ENSG00000204463.12 TPM= 6.79 Transcript Type= NA chr6 31639028 31652393 31639028 31652393 - ENST00000375976.8@BAG6 ENST00000375976.8 protein_coding 31652247,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639028 31652393,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226 Gene ID= ENSG00000204463.12 TPM= 5.59 Transcript Type= protein_coding chr6 31639028 31652705 31639028 31652705 - ENST00000211379.9@BAG6 ENST00000211379.9 protein_coding 31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639500,31639028 31652705,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639646,31639226 Gene ID= ENSG00000204463.12 TPM= 13.74 Transcript Type= protein_coding chr6 31639029 31652700 31639029 31652700 - ENST00000362049.10@BAG6 ENST00000362049.10 protein_coding 31652424,31651656,31649510,31649199,31648911,31648677,31647591,31646394,31645407,31644946,31644525,31644082,31643890,31642829,31642112,31641776,31641539,31641320,31641104,31640792,31640645,31640385,31640199,31639029 31652700,31651776,31649627,31649395,31648964,31648751,31647826,31646523,31645604,31645198,31644602,31644194,31643977,31643115,31642403,31641945,31641592,31641422,31641228,31640938,31640704,31640528,31640306,31639226 Gene ID= ENSG00000204463.12 TPM= 6.34 Transcript Type= protein_coding chr6 31661229 31666283 31661229 31666283 - ENST00000375906.5@GPANK1 ENST00000375906.5 protein_coding 31665861,31664841,31663853,31661229 31666283,31665003,31664577,31662710 Gene ID= ENSG00000204438.10 TPM= 7.92 Transcript Type= protein_coding chr6 31661230 31665009 31661230 31665009 - transcript1021.chr6.nic@GPANK1 transcript1021.chr6.nic protein_coding 31664841,31663853,31661230 31665009,31664580,31662710 Gene ID= ENSG00000204438.10 TPM= 6.86 Transcript Type= NA chr6 31662076 31665850 31662076 31665850 - ENST00000375895.6@GPANK1 ENST00000375895.6 protein_coding 31665574,31664841,31663853,31662076 31665850,31665003,31664577,31662710 Gene ID= ENSG00000204438.10 TPM= 6.41 Transcript Type= protein_coding chr6 31662076 31665861 31662076 31665861 - ENST00000375900.8@GPANK1 ENST00000375900.8 protein_coding 31665574,31664841,31663853,31662076 31665861,31665003,31664580,31662710 Gene ID= ENSG00000204438.10 TPM= 5.96 Transcript Type= protein_coding chr6 31666064 31670070 31666064 31670070 + ENST00000375882.6@CSNK2B ENST00000375882.6 protein_coding 31666064,31666821,31667868,31668539,31669097,31669319,31669836 31666208,31666903,31667970,31668654,31669172,31669508,31670070 Gene ID= ENSG00000204435.13 TPM= 95.08 Transcript Type= protein_coding chr6 31666064 31670069 31666064 31670069 + transcript1023.chr6.nic@CSNK2B transcript1023.chr6.nic protein_coding 31666064,31666821,31667868,31668539,31669097,31669836 31666208,31666903,31667970,31668654,31669508,31670069 Gene ID= ENSG00000204435.13 TPM= 8.15 Transcript Type= NA chr6 31676700 31681476 31676700 31681476 - ENST00000474395.5@LY6G5C ENST00000474395.5 protein_coding 31681230,31679101,31676700 31681476,31679268,31677120 Gene ID= ENSG00000204428.12 TPM= 4.53 Transcript Type= processed_transcript chr6 31686949 31703444 31686949 31703444 - ENST00000395952.7@ABHD16A ENST00000395952.7 protein_coding 31703150,31702074,31701274,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686949 31703444,31702130,31701340,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687740,31687544,31687295 Gene ID= ENSG00000204427.11 TPM= 60.67 Transcript Type= protein_coding chr6 31686952 31703333 31686952 31703333 - transcript1037.chr6.nnic@ABHD16A transcript1037.chr6.nnic protein_coding 31703150,31700942,31696948,31693359,31693027,31691804,31691579,31690539,31690078,31689581,31689015,31688723,31688249,31688041,31687824,31687642,31687498,31686952 31703333,31701028,31697033,31693432,31693149,31691918,31691680,31690602,31690127,31689704,31689119,31688786,31688305,31688103,31687900,31687727,31687544,31687295 Gene ID= ENSG00000204427.11 TPM= 5.43 Transcript Type= NA chr6 31727038 31730617 31727038 31730617 - ENST00000375792.7@DDAH2 ENST00000375792.7 protein_coding 31730051,31728865,31728646,31728451,31728173,31727543,31727038 31730617,31729225,31728745,31728524,31728292,31727692,31727353 Gene ID= ENSG00000213722.8 TPM= 44.98 Transcript Type= protein_coding chr6 31727038 31730262 31727038 31730262 - ENST00000483792.1@DDAH2 ENST00000483792.1 protein_coding 31730051,31728646,31728173,31727543,31727038 31730262,31728745,31728292,31727692,31727353 Gene ID= ENSG00000213722.8 TPM= 1.36 Transcript Type= processed_transcript chr6 31727038 31729792 31727038 31729792 - ENST00000375789.6@DDAH2 ENST00000375789.6 protein_coding 31728865,31728646,31728451,31728173,31727543,31727038 31729792,31728745,31728524,31728292,31727692,31727353 Gene ID= ENSG00000213722.8 TPM= 24.15 Transcript Type= protein_coding chr6 31730581 31736567 31730581 31736567 - ENST00000375784.7@CLIC1 ENST00000375784.7 protein_coding 31736262,31734154,31733836,31733566,31732217,31730581 31736567,31734263,31733961,31733672,31732398,31731003 Gene ID= ENSG00000213719.8 TPM= 189.71 Transcript Type= protein_coding chr6 31730583 31736545 31730583 31736545 - ENST00000616760.1@CLIC1 ENST00000616760.1 protein_coding 31736483,31736262,31734154,31733836,31733566,31732217,31730583 31736545,31736350,31734263,31733961,31733672,31732398,31731003 Gene ID= ENSG00000213719.8 TPM= 44.82 Transcript Type= protein_coding chr6 31777521 31795933 31777521 31795933 - transcript1051.chr6.nnic@VARS transcript1051.chr6.nnic protein_coding 31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777521 31795933,31795186,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662 Gene ID= ENSG00000204394.12 TPM= 7.24 Transcript Type= NA chr6 31777521 31795936 31777521 31795936 - transcript1055.chr6.nic@VARS transcript1055.chr6.nic protein_coding 31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777521 31795936,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662 Gene ID= ENSG00000204394.12 TPM= 13.58 Transcript Type= NA chr6 31777518 31795953 31777518 31795953 - ENST00000375663.7@VARS ENST00000375663.7 protein_coding 31795546,31794831,31792986,31792757,31792392,31792217,31791871,31791610,31785569,31785246,31784595,31784394,31784214,31783096,31782721,31782530,31782285,31782087,31781847,31781691,31781481,31781019,31780870,31780705,31780441,31779998,31779608,31779425,31778967,31777518 31795953,31795250,31793120,31792895,31792516,31792301,31791971,31791737,31785733,31785327,31784714,31784502,31784308,31783186,31782845,31782633,31782443,31782177,31781952,31781761,31781606,31781123,31780938,31780783,31780568,31780153,31779814,31779536,31779292,31777662 Gene ID= ENSG00000204394.12 TPM= 130.4 Transcript Type= protein_coding chr6 31797396 31806984 31797396 31806984 - ENST00000375661.5@LSM2 ENST00000375661.5 protein_coding 31806755,31806075,31798477,31797990,31797396 31806984,31806142,31798507,31798049,31797882 Gene ID= ENSG00000204392.10 TPM= 38.03 Transcript Type= protein_coding chr6 31834608 31839761 31834608 31839761 + ENST00000375640.7@C6orf48 ENST00000375640.7 protein_coding 31834608,31835411,31837236,31839543 31835200,31835451,31837435,31839761 Gene ID= ENSG00000204387.12 TPM= 27.17 Transcript Type= protein_coding chr6 31834908 31839761 31834908 31839761 + ENST00000375635.6@C6orf48 ENST00000375635.6 protein_coding 31834908,31835411,31837236,31839543 31835057,31835451,31837435,31839761 Gene ID= ENSG00000204387.12 TPM= 1.81 Transcript Type= protein_coding chr6 31834908 31839761 31834908 31839761 + ENST00000375638.7@C6orf48 ENST00000375638.7 protein_coding 31834908,31835411,31836424,31837236,31839543 31835200,31835451,31836517,31837435,31839761 Gene ID= ENSG00000204387.12 TPM= 14.49 Transcript Type= protein_coding chr6 31859052 31862906 31859052 31862906 - ENST00000375631.4@NEU1 ENST00000375631.4 protein_coding 31862618,31861999,31861188,31860439,31860042,31859052 31862906,31862191,31861450,31860621,31860264,31859945 Gene ID= ENSG00000204386.10 TPM= 332.34 Transcript Type= protein_coding chr6 31863170 31877320 31863170 31877320 - transcript1089.chr6.nic@SLC44A4 transcript1089.chr6.nic protein_coding 31877034,31876056,31875852,31874929,31874721,31874460,31871474,31871314,31870812,31870603,31869545,31869155,31865873,31865690,31865498,31865315,31865010,31864816,31864652,31863170 31877320,31876129,31875930,31875028,31874846,31874520,31871561,31871397,31871047,31870702,31869637,31869257,31866126,31865784,31865601,31865388,31865080,31864910,31864736,31863748 Gene ID= ENSG00000204385.10 TPM= 14.64 Transcript Type= NA chr6 31863170 31871442 31863170 31871442 - transcript1093.chr6.nic@SLC44A4 transcript1093.chr6.nic protein_coding 31871314,31870812,31870603,31869545,31869155,31865873,31865690,31865498,31865315,31865010,31864816,31864652,31863170 31871442,31871047,31870702,31869637,31869257,31866126,31865784,31865601,31865388,31865080,31864910,31864736,31863748 Gene ID= ENSG00000204385.10 TPM= 4.68 Transcript Type= NA chr6 31863170 31871285 31863170 31871285 - transcript1094.chr6.nic@SLC44A4 transcript1094.chr6.nic protein_coding 31870812,31870603,31869545,31869155,31865873,31865690,31865498,31865315,31865010,31864816,31864652,31863170 31871285,31870702,31869637,31869257,31866126,31865784,31865601,31865388,31865080,31864910,31864736,31863748 Gene ID= ENSG00000204385.10 TPM= 6.95 Transcript Type= NA chr6 31879759 31897730 31879759 31897730 - transcript1098.chr6.nic@EHMT2 transcript1098.chr6.nic protein_coding 31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884891,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759 31897730,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264 Gene ID= ENSG00000204371.11 TPM= 7.47 Transcript Type= NA chr6 31879759 31897684 31879759 31897684 - ENST00000375537.8@EHMT2 ENST00000375537.8 protein_coding 31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888969,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759 31897684,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31889070,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264 Gene ID= ENSG00000204371.11 TPM= 116.89 Transcript Type= protein_coding chr6 31879759 31897677 31879759 31897677 - ENST00000375530.8@EHMT2 ENST00000375530.8 protein_coding 31897636,31896923,31896606,31896263,31892826,31892694,31892407,31889468,31889228,31888599,31888363,31888041,31887779,31887577,31886995,31886775,31886581,31884912,31884645,31884392,31883806,31883362,31882894,31882699,31881014,31880673,31879759 31897677,31896989,31896824,31896516,31892910,31892734,31892562,31889602,31889342,31888747,31888506,31888276,31887961,31887659,31887101,31886897,31886682,31885016,31884799,31884559,31883950,31883439,31883009,31882785,31881092,31880848,31880264 Gene ID= ENSG00000204371.11 TPM= 24.52 Transcript Type= protein_coding chr6 31927677 31945671 31927677 31945671 + transcript1115.chr6.nic@C2 transcript1115.chr6.nic protein_coding 31927677,31927955,31928732,31933610,31933867,31934166,31935923,31937319,31939231,31942959,31943225,31943416,31943644,31943917,31944135,31944727,31944980,31945462 31927798,31928164,31928917,31933783,31933965,31934299,31936061,31937459,31939320,31943099,31943319,31943527,31943809,31943993,31944226,31944853,31945029,31945671 Gene ID= ENSG00000166278.14 TPM= 4.07 Transcript Type= NA chr6 31927703 31935058 31927703 31935058 + ENST00000418949.6@C2 ENST00000418949.6 protein_coding 31927703,31927955,31928732,31933610,31933867,31934166 31927798,31928164,31928917,31933783,31933965,31935058 Gene ID= ENSG00000166278.14 TPM= 6.34 Transcript Type= protein_coding chr6 31952087 31959110 31952087 31959110 - ENST00000375429.7@NELFE ENST00000375429.7 protein_coding 31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31954080,31953729,31952087 31959110,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31953831,31952398 Gene ID= ENSG00000204356.13 TPM= 99.61 Transcript Type= protein_coding chr6 31952228 31958962 31952228 31958962 - ENST00000481121.5@NELFE ENST00000481121.5 protein_coding 31958892,31958372,31956941,31956693,31955219,31955059,31954555,31954298,31953729,31952228 31958962,31958454,31957010,31956838,31955293,31955096,31954892,31954442,31954134,31952398 Gene ID= ENSG00000204356.13 TPM= 13.58 Transcript Type= retained_intron chr6 31959175 31969756 31959175 31969756 + transcript1143.chr6.nic@SKIV2L transcript1143.chr6.nic protein_coding 31959175,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968328,31968686,31968871,31969280 31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968082,31968538,31968796,31969089,31969756 Gene ID= ENSG00000204351.11 TPM= 4.53 Transcript Type= NA chr6 31959113 31969809 31959113 31969809 + transcript1160.chr6.nic@SKIV2L transcript1160.chr6.nic protein_coding 31959113,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968686,31968871 31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968538,31968796,31969809 Gene ID= ENSG00000204351.11 TPM= 9.06 Transcript Type= NA chr6 31959080 31969755 31959080 31969755 + ENST00000375394.6@SKIV2L ENST00000375394.6 protein_coding 31959080,31959297,31960010,31960220,31960432,31960666,31961041,31961196,31961547,31961909,31962439,31962714,31962985,31963413,31963637,31963913,31964232,31965783,31966709,31967004,31967273,31967715,31967956,31968328,31968686,31968871,31969280,31969515 31959214,31959400,31960119,31960337,31960546,31960740,31961094,31961386,31961675,31962054,31962585,31962798,31963091,31963559,31963733,31964125,31964342,31966013,31966846,31967141,31967377,31967862,31968082,31968538,31968796,31969089,31969420,31969755 Gene ID= ENSG00000204351.11 TPM= 95.38 Transcript Type= protein_coding chr6 31969810 31972292 31969810 31972292 - ENST00000337523.9@DXO ENST00000337523.9 protein_coding 31971929,31971320,31970912,31970606,31970343,31970109,31969810 31972292,31971681,31971147,31970825,31970478,31970203,31970024 Gene ID= ENSG00000204348.9 TPM= 35.32 Transcript Type= protein_coding chr6 31969815 31972095 31969815 31972095 - ENST00000473976.1@DXO ENST00000473976.1 protein_coding 31971320,31970109,31969815 31972095,31971147,31970024 Gene ID= ENSG00000204348.9 TPM= 5.43 Transcript Type= retained_intron chr6 31972543 31981464 31972543 31981464 + transcript1253.chr6.nic@STK19 transcript1253.chr6.nic protein_coding 31972543,31978903,31979414,31980451,31980654,31981004 31972757,31979010,31979553,31980548,31980801,31981464 Gene ID= ENSG00000204344.14 TPM= 24.45 Transcript Type= NA chr6 31971091 31981446 31971091 31981446 + ENST00000466132.5@STK19 ENST00000466132.5 protein_coding 31971091,31971869,31972621,31978903,31979414,31980451,31980654,31981004 31971274,31972511,31972757,31978998,31979553,31980548,31980801,31981446 Gene ID= ENSG00000204344.14 TPM= 38.94 Transcript Type= retained_intron chr6 31972555 31981446 31972555 31981446 + ENST00000491861.5@STK19 ENST00000491861.5 protein_coding 31972555,31978903,31979414,31980451,31980654,31981004 31972757,31978998,31979553,31980548,31980801,31981446 Gene ID= ENSG00000204344.14 TPM= 33.51 Transcript Type= retained_intron chr6 31982024 32002681 31982024 32002681 + ENST00000428956.6@C4A ENST00000428956.6 protein_coding 31982024,31982305,31982718,31983129,31983278,31983585,31983838,31984073,31984276,31991192,31991407,31991732,31992047,31992386,31992796,31993090,31993425,31993714,31993916,31994245,31994498,31994952,31995105,31995330,31995719,31995955,31996207,31996429,31996829,31997144,31997705,31998814,31999005,31999306,31999487,32001053,32001321,32001496,32001777,32002123,32002399 31982172,31982503,31982919,31983199,31983366,31983667,31983934,31984178,31984408,31991307,31991586,31991914,31992232,31992544,31992922,31993164,31993622,31993825,31993986,31994384,31994707,31995003,31995194,31995539,31995794,31996111,31996323,31996600,31997061,31997311,31997764,31998907,31999191,31999396,31999561,32001155,32001410,32001594,32001860,32002255,32002681 Gene ID= ENSG00000244731.7 TPM= 1147.33 Transcript Type= protein_coding chr6 32000998 32002664 32000998 32002664 + ENST00000469975.5@C4A ENST00000469975.5 protein_coding 32000998,32001321,32001496,32001777,32002123,32002399 32001155,32001410,32001594,32001860,32002255,32002664 Gene ID= ENSG00000244731.7 TPM= 35.32 Transcript Type= retained_intron chr6 32008411 32012715 32008411 32012715 - transcript1197.chr6.nic@TNXA transcript1197.chr6.nic unprocessed_pseudogene 32011527,32011153,32010986,32010703,32010441,32010217,32009965,32009721,32009531,32009277,32009036,32008411 32012715,32011275,32011038,32010822,32010584,32010347,32010097,32009872,32009627,32009438,32009199,32008715 Gene ID= ENSG00000248290.1 TPM= 127.91 Transcript Type= NA chr6 32008411 32013142 32008411 32013142 - transcript1198.chr6.nic@TNXA transcript1198.chr6.nic unprocessed_pseudogene 32012152,32011527,32010986,32010703,32010441,32010217,32009965,32009721,32009531,32009277,32009036,32008411 32013142,32011862,32011275,32010822,32010584,32010347,32010097,32009872,32009627,32009438,32009199,32008715 Gene ID= ENSG00000248290.1 TPM= 46.93 Transcript Type= NA chr6 32014762 32035418 32014762 32035418 + ENST00000435363.6@C4B ENST00000435363.6 protein_coding 32014762,32015043,32015456,32015867,32016016,32016323,32016576,32016811,32017014,32023930,32024145,32024470,32024785,32025124,32025534,32025828,32026163,32026452,32026654,32026983,32027236,32027690,32027843,32028068,32028457,32028693,32028945,32029167,32029566,32029881,32030442,32031551,32031742,32032043,32032224,32033790,32034058,32034233,32034514,32034860,32035136 32014910,32015241,32015657,32015937,32016104,32016405,32016672,32016916,32017146,32024045,32024324,32024652,32024970,32025282,32025660,32025902,32026360,32026563,32026724,32027122,32027445,32027741,32027932,32028277,32028532,32028849,32029061,32029338,32029798,32030048,32030501,32031644,32031928,32032133,32032298,32033892,32034147,32034331,32034597,32034992,32035418 Gene ID= ENSG00000224389.8 TPM= 2511.08 Transcript Type= protein_coding chr6 32033735 32035401 32033735 32035401 + ENST00000468237.5@C4B ENST00000468237.5 protein_coding 32033735,32034058,32034233,32034514,32034860,32035136 32033892,32034147,32034331,32034597,32034992,32035401 Gene ID= ENSG00000224389.8 TPM= 15.39 Transcript Type= retained_intron chr6 32038415 32041642 32038415 32041642 + ENST00000435122.3@CYP21A2 ENST00000435122.3 protein_coding 32038415,32039094,32039356,32039546,32039749,32040005,32040406,32040668,32040869 32038624,32039248,32039457,32039647,32039835,32040205,32040584,32040771,32041642 Gene ID= ENSG00000231852.6 TPM= 454.48 Transcript Type= protein_coding chr6 32038265 32041670 32038265 32041670 + ENST00000418967.6@CYP21A2 ENST00000418967.6 protein_coding 32038265,32038722,32039094,32039356,32039546,32039749,32040005,32040406,32040668,32040869 32038624,32038811,32039248,32039457,32039647,32039835,32040205,32040584,32040771,32041670 Gene ID= ENSG00000231852.6 TPM= 16105.09 Transcript Type= protein_coding chr6 32038365 32041642 32038365 32041642 + ENST00000479074.5@CYP21A2 ENST00000479074.5 protein_coding 32038365,32038722,32039094,32039356,32039546,32039749,32040005,32040406,32040869 32038624,32038811,32039248,32039457,32039647,32039835,32040205,32040771,32041642 Gene ID= ENSG00000231852.6 TPM= 91.96 Transcript Type= retained_intron chr6 32038370 32041186 32038370 32041186 + ENST00000483041.5@CYP21A2 ENST00000483041.5 protein_coding 32038370,32039075,32039356,32039546,32039749,32040005,32040406,32040668,32040869 32038811,32039248,32039457,32039647,32039835,32040205,32040584,32040771,32041186 Gene ID= ENSG00000231852.6 TPM= 8.76 Transcript Type= retained_intron chr6 32038365 32041642 32038365 32041642 + ENST00000479730.5@CYP21A2 ENST00000479730.5 protein_coding 32038365,32039094,32039356,32039585,32039749,32040005,32040406,32040668,32040869 32038811,32039248,32039457,32039647,32039835,32040205,32040584,32040771,32041642 Gene ID= ENSG00000231852.6 TPM= 129.01 Transcript Type= retained_intron chr6 32041150 32045818 32041150 32045818 - transcript1181.chr6.nnic@TNXB transcript1181.chr6.nnic protein_coding 32045006,32044381,32044007,32043749,32043437,32043175,32042951,32042699,32042455,32042266,32042012,32041771,32041150 32045818,32044716,32044129,32043892,32043556,32043318,32043081,32042831,32042606,32042362,32042173,32041873,32041450 Gene ID= ENSG00000168477.17 TPM= 4.92 Transcript Type= NA chr6 32041150 32045815 32041150 32045815 - transcript1209.chr6.nnic@TNXB transcript1209.chr6.nnic protein_coding 32045006,32044381,32044007,32043840,32043437,32043175,32042951,32042455,32042266,32042012,32041771,32041150 32045815,32044716,32044129,32043892,32043556,32043318,32043081,32042831,32042362,32042173,32041934,32041450 Gene ID= ENSG00000168477.17 TPM= 13.97 Transcript Type= NA chr6 32115264 32128240 32115264 32128240 - ENST00000375203.7@ATF6B ENST00000375203.7 protein_coding 32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120771,32119824,32118956,32118775,32117859,32117587,32117323,32117037,32116704,32116480,32115264 32128240,32127750,32127520,32127194,32126252,32121348,32121124,32120902,32119957,32119141,32118866,32118038,32117694,32117404,32117107,32116815,32116564,32115968 Gene ID= ENSG00000213676.10 TPM= 2.72 Transcript Type= protein_coding chr6 32120442 32128222 32120442 32128222 - ENST00000495579.5@ATF6B ENST00000495579.5 protein_coding 32128117,32127671,32127442,32127103,32126117,32121263,32120989,32120442 32128222,32127750,32127520,32127194,32126252,32121348,32121124,32120902 Gene ID= ENSG00000213676.10 TPM= 6.34 Transcript Type= retained_intron chr6 32128707 32130291 32128707 32130291 - ENST00000375156.3@FKBPL ENST00000375156.3 protein_coding 32130095,32128707 32130291,32129854 Gene ID= ENSG00000204315.3 TPM= 4.53 Transcript Type= protein_coding chr6 32152798 32154387 32152798 32154387 - transcript1315.chr6.nic@PRRT1 transcript1315.chr6.nic protein_coding 32154169,32153737,32152798 32154387,32153836,32153172 Gene ID= ENSG00000204314.10 TPM= 2.26 Transcript Type= NA chr6 32152802 32154333 32152802 32154333 - ENST00000485392.5@PRRT1 ENST00000485392.5 protein_coding 32154238,32153737,32152802 32154333,32153836,32153172 Gene ID= ENSG00000204314.10 TPM= 2.26 Transcript Type= processed_transcript chr6 32154095 32163678 32154095 32163678 + ENST00000375137.6@PPT2 ENST00000375137.6 protein_coding 32154095,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32162807 32154394,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32163678 Gene ID= ENSG00000221988.12 TPM= 1.36 Transcript Type= protein_coding chr6 32154138 32163678 32154138 32163678 + ENST00000375143.6@PPT2 ENST00000375143.6 protein_coding 32154138,32154587,32155030,32155688,32155871,32157637,32157840,32162568,32162807 32154246,32154777,32155183,32155783,32155978,32157720,32157924,32162622,32163678 Gene ID= ENSG00000221988.12 TPM= 2.26 Transcript Type= protein_coding chr6 32168212 32176122 32168212 32176122 - ENST00000375107.7@AGPAT1 ENST00000375107.7 protein_coding 32175814,32171297,32170937,32170425,32170165,32169966,32168212 32176122,32171505,32171070,32170600,32170260,32170038,32169448 Gene ID= ENSG00000204310.12 TPM= 63.09 Transcript Type= protein_coding chr6 32168212 32178096 32168212 32178096 - ENST00000336984.6@AGPAT1 ENST00000336984.6 protein_coding 32178001,32171297,32170937,32170425,32170165,32169966,32168212 32178096,32171505,32171070,32170600,32170260,32170038,32169448 Gene ID= ENSG00000204310.12 TPM= 6.95 Transcript Type= protein_coding chr6 32168212 32177080 32168212 32177080 - ENST00000395499.5@AGPAT1 ENST00000395499.5 protein_coding 32176510,32171297,32170937,32170425,32170165,32169966,32168212 32177080,32171505,32171070,32170600,32170260,32170038,32169448 Gene ID= ENSG00000204310.12 TPM= 19.62 Transcript Type= protein_coding chr6 32178354 32180793 32178354 32180793 + ENST00000375094.3@RNF5 ENST00000375094.3 protein_coding 32178354,32179541,32179651,32179877,32180009,32180229 32178651,32179559,32179763,32179931,32180126,32180793 Gene ID= ENSG00000204308.7 TPM= 138.55 Transcript Type= protein_coding chr6 32184733 32185882 32184733 32185882 - ENST00000559458.2@AL662884.1 ENST00000559458.2 3prime_overlapping_ncRNA 32185324,32184733 32185882,32184835 Gene ID= ENSG00000273333.2 TPM= 9.96 Transcript Type= 3prime_overlapping_ncRNA chr6 32190766 32192906 32190766 32192906 - ENST00000375040.7@GPSM3 ENST00000375040.7 protein_coding 32192472,32192148,32191709,32190766 32192906,32192250,32191908,32191503 Gene ID= ENSG00000213654.9 TPM= 6.34 Transcript Type= protein_coding chr6 32194843 32224067 32194843 32224067 - ENST00000375023.3@NOTCH4 ENST00000375023.3 protein_coding 32223856,32223005,32222511,32220978,32220756,32220405,32220129,32219592,32217995,32217153,32216945,32215226,32214110,32213688,32213135,32212824,32212474,32210752,32204137,32203770,32202076,32201117,32200831,32198926,32198649,32198421,32197299,32196925,32196324,32194843 32224067,32223086,32222806,32221325,32220878,32220641,32220284,32219786,32218108,32217266,32217067,32215385,32214255,32213840,32213252,32212911,32212627,32210936,32204389,32203882,32202599,32201500,32201006,32199145,32198730,32198559,32197594,32197072,32196421,32196150 Gene ID= ENSG00000204301.6 TPM= 2.94 Transcript Type= protein_coding chr6 32194844 32203506 32194844 32203506 - transcript1334.chr6.nnic@NOTCH4 transcript1334.chr6.nnic protein_coding 32201117,32200831,32198926,32198658,32198421,32197299,32196925,32196324,32194844 32203506,32201006,32199145,32198730,32198559,32197594,32197072,32196421,32196150 Gene ID= ENSG00000204301.6 TPM= 5.66 Transcript Type= NA chr6 32194844 32202302 32194844 32202302 - transcript1336.chr6.nnic@NOTCH4 transcript1336.chr6.nnic protein_coding 32201117,32200831,32198658,32198421,32197299,32196925,32196324,32194844 32202302,32201006,32198730,32198559,32197594,32197072,32196421,32196150 Gene ID= ENSG00000204301.6 TPM= 2.94 Transcript Type= NA chr6 32194844 32203503 32194844 32203503 - transcript1337.chr6.nnic@NOTCH4 transcript1337.chr6.nnic protein_coding 32200831,32198658,32198421,32197299,32196925,32196324,32194844 32203503,32198730,32198559,32197594,32197072,32196421,32196150 Gene ID= ENSG00000204301.6 TPM= 3.85 Transcript Type= NA chr6 32255020 32391948 32255020 32391948 + transcript1341.chr6.nnic@AL671511.2 transcript1341.chr6.nnic antisense_RNA 32255020,32365780,32390214 32255414,32365839,32391948 Gene ID= ENSG00000277427.1 TPM= 1.81 Transcript Type= NA chr6 32439842 32445046 32439842 32445046 + ENST00000395388.6@HLA-DRA ENST00000395388.6 protein_coding 32439842,32442448,32443185,32443756,32444652 32440032,32442693,32443466,32443921,32445046 Gene ID= ENSG00000204287.13 TPM= 100.52 Transcript Type= protein_coding chr6 32517463 32589848 32517463 32589848 - transcript1344.chr6.nnic@HLA-DRB6 transcript1344.chr6.nnic transcribed_unprocessed_pseudogene 32589643,32584109,32581594,32554690,32553856,32553376,32552784,32517463 32589848,32584378,32581838,32554726,32553966,32553399,32553059,32517475 Gene ID= ENSG00000229391.7 TPM= 30.79 Transcript Type= NA chr6 32517497 32589848 32517497 32589848 - transcript1347.chr6.nnic@HLA-DRB6 transcript1347.chr6.nnic transcribed_unprocessed_pseudogene 32589643,32584109,32581594,32554690,32553856,32553376,32552841,32517497 32589848,32584378,32581838,32554726,32553966,32553399,32553059,32517531 Gene ID= ENSG00000229391.7 TPM= 18.11 Transcript Type= NA chr6 32578769 32589848 32578769 32589848 - ENST00000360004.5@HLA-DRB1 ENST00000360004.5 protein_coding 32589643,32584109,32581557,32580746,32580247,32578769 32589848,32584378,32581838,32580856,32580270,32579104 Gene ID= ENSG00000196126.11 TPM= 93.27 Transcript Type= protein_coding chr6 32637372 32645670 32637372 32645670 + transcript1361.chr6.nnic@HLA-DQA1 transcript1361.chr6.nnic protein_coding 32637372,32641310,32641972,32642610,32643158 32637540,32641558,32642253,32642784,32645670 Gene ID= ENSG00000196735.11 TPM= 3.62 Transcript Type= NA chr6 32637372 32746887 32637372 32746887 + transcript1362.chr6.nnic@HLA-DQA1 transcript1362.chr6.nnic protein_coding 32637372,32641310,32641972,32642610,32746791 32637540,32641558,32642253,32642784,32746887 Gene ID= ENSG00000196735.11 TPM= 2.72 Transcript Type= NA chr6 32637372 32746887 32637372 32746887 + transcript1363.chr6.nnic@HLA-DQA2 transcript1363.chr6.nnic protein_coding 32637372,32641310,32745791,32746240,32746791 32637540,32641558,32746072,32746414,32746887 Gene ID= ENSG00000237541.3 TPM= 7.24 Transcript Type= NA chr6 32659467 32666694 32659467 32666694 - ENST00000434651.6@HLA-DQB1 ENST00000434651.6 protein_coding 32666499,32664798,32661967,32661347,32659467 32666694,32665067,32662248,32661457,32660249 Gene ID= ENSG00000179344.16 TPM= 19.92 Transcript Type= protein_coding chr6 32840717 32844047 32840717 32844047 - ENST00000374882.7@PSMB8 ENST00000374882.7 protein_coding 32843850,32842942,32842672,32842134,32841531,32840717 32844047,32843089,32842783,32842263,32841735,32841047 Gene ID= ENSG00000204264.8 TPM= 65.65 Transcript Type= protein_coding chr6 32840717 32844703 32840717 32844703 - ENST00000374881.2@PSMB8 ENST00000374881.2 protein_coding 32844279,32842942,32842672,32842134,32841531,32840717 32844703,32843089,32842783,32842263,32841735,32841047 Gene ID= ENSG00000204264.8 TPM= 51.16 Transcript Type= protein_coding chr6 32852810 32859578 32852810 32859578 + transcript1372.chr6.nnic@PSMB9 transcript1372.chr6.nnic protein_coding 32852810,32856138,32857263,32858005,32858364,32859405 32853709,32856205,32857394,32858134,32858505,32859578 Gene ID= ENSG00000240065.7 TPM= 1.81 Transcript Type= NA chr6 32854161 32859585 32854161 32859585 + ENST00000374859.2@PSMB9 ENST00000374859.2 protein_coding 32854161,32856138,32857263,32858005,32858364,32859405 32854289,32856205,32857394,32858134,32858505,32859585 Gene ID= ENSG00000240065.7 TPM= 35.32 Transcript Type= protein_coding chr6 32845209 32853978 32845209 32853978 - ENST00000354258.4@TAP1 ENST00000354258.4 protein_coding 32853039,32852388,32852109,32850944,32850320,32848990,32848652,32847919,32847513,32847068,32845209 32853978,32852502,32852239,32851149,32850517,32849118,32848840,32848092,32847675,32847204,32845785 Gene ID= ENSG00000168394.10 TPM= 168.43 Transcript Type= protein_coding chr6 32934629 32941070 32934629 32941070 - ENST00000418107.2@HLA-DMB ENST00000418107.2 protein_coding 32940753,32938684,32937172,32935536,32935342,32934629 32941070,32938965,32937456,32935652,32935377,32934987 Gene ID= ENSG00000242574.8 TPM= 15.39 Transcript Type= protein_coding chr6 32934629 32941050 32934629 32941050 - transcript1386.chr6.nic@HLA-DMB transcript1386.chr6.nic protein_coding 32940753,32938684,32937172,32935342,32934629 32941050,32938965,32937456,32935377,32934987 Gene ID= ENSG00000242574.8 TPM= 1.81 Transcript Type= NA chr6 32934634 32941050 32934634 32941050 - transcript1387.chr6.nic@HLA-DMB transcript1387.chr6.nic protein_coding 32940753,32938684,32937172,32935536,32934634 32941050,32938965,32937456,32935652,32934987 Gene ID= ENSG00000242574.8 TPM= 1.81 Transcript Type= NA chr6 32948613 32953108 32948613 32953108 - ENST00000395303.7@HLA-DMA ENST00000395303.7 protein_coding 32952949,32950519,32949611,32949271,32948613 32953108,32950803,32949787,32949399,32948868 Gene ID= ENSG00000204257.14 TPM= 2.72 Transcript Type= protein_coding chr6 32948613 32953122 32948613 32953122 - ENST00000374843.8@HLA-DMA ENST00000374843.8 protein_coding 32952949,32950519,32949611,32949271,32948613 32953122,32950803,32949889,32949399,32948868 Gene ID= ENSG00000204257.14 TPM= 37.13 Transcript Type= protein_coding chr6 32948613 32953108 32948613 32953108 - ENST00000477541.1@HLA-DMA ENST00000477541.1 protein_coding 32952949,32949611,32949274,32948613 32953108,32950803,32949399,32948868 Gene ID= ENSG00000204257.14 TPM= 1.81 Transcript Type= retained_intron chr6 32968587 32981308 32968587 32981308 + transcript1391.chr6.nnic@BRD2 transcript1391.chr6.nnic protein_coding 32968587,32971595,32974462,32975021,32975384,32976031,32976250,32976562,32977442,32977757,32978126,32979828,32980342,32980582,32981158 32969056,32972927,32974765,32975112,32975521,32976169,32976464,32976936,32977570,32978005,32978388,32980132,32980464,32980651,32981308 Gene ID= ENSG00000204256.12 TPM= 9.06 Transcript Type= NA chr6 32970937 32981498 32970937 32981498 + transcript1395.chr6.nnic@BRD2 transcript1395.chr6.nnic protein_coding 32970937,32971689,32974462,32975021,32975384,32976031,32976250,32976562,32977442,32977757,32978126,32979828,32980342,32980582 32970985,32972927,32974765,32975112,32975521,32976169,32976464,32976936,32977570,32978005,32978388,32980132,32980464,32981498 Gene ID= ENSG00000204256.12 TPM= 19.92 Transcript Type= NA chr6 32970888 32981505 32970888 32981505 + ENST00000374831.8@BRD2 ENST00000374831.8 protein_coding 32970888,32971595,32974462,32975384,32976031,32976250,32976562,32977442,32977757,32978126,32979828,32980342,32980582 32971197,32972927,32974765,32975521,32976169,32976464,32976936,32977570,32978005,32978388,32980132,32980464,32981505 Gene ID= ENSG00000204256.12 TPM= 28.98 Transcript Type= protein_coding chr6 33004185 33009654 33004185 33009654 - transcript1404.chr6.nnic@HLA-DOA transcript1404.chr6.nnic protein_coding 33009455,33008013,33007311,33007080,33005709,33004185 33009654,33008261,33007592,33007215,33006841,33005390 Gene ID= ENSG00000204252.13 TPM= 2.72 Transcript Type= NA chr6 33004178 33009612 33004178 33009612 - ENST00000229829.6@HLA-DOA ENST00000229829.6 protein_coding 33009455,33008013,33007311,33007080,33004178 33009612,33008261,33007592,33007215,33006841 Gene ID= ENSG00000204252.13 TPM= 3.62 Transcript Type= protein_coding chr6 33193587 33200708 33193587 33200708 - transcript1412.chr6.nnic@RXRB transcript1412.chr6.nnic protein_coding 33200242,33199169,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193587 33200708,33199416,33198361,33197941,33196606,33196036,33195702,33195454,33195050,33194829 Gene ID= ENSG00000204231.10 TPM= 2.26 Transcript Type= NA chr6 33193587 33200661 33193587 33200661 - transcript1416.chr6.nnic@RXRB transcript1416.chr6.nnic protein_coding 33200242,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193587 33200661,33198361,33197941,33196606,33196036,33195702,33195454,33195050,33194829 Gene ID= ENSG00000204231.10 TPM= 2.26 Transcript Type= NA chr6 33193587 33200364 33193587 33200364 - transcript1419.chr6.nic@RXRB transcript1419.chr6.nic protein_coding 33200242,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193587 33200364,33198464,33197941,33196606,33196036,33195702,33195466,33195050,33194829 Gene ID= ENSG00000204231.10 TPM= 4.98 Transcript Type= NA chr6 33193587 33200708 33193587 33200708 - transcript1424.chr6.nic@RXRB transcript1424.chr6.nic protein_coding 33200242,33199169,33198308,33197762,33195570,33195363,33194945,33193587 33200708,33199416,33198464,33197941,33196606,33195466,33195050,33194829 Gene ID= ENSG00000204231.10 TPM= 2.26 Transcript Type= NA chr6 33193587 33198913 33193587 33198913 - transcript1426.chr6.nic@RXRB transcript1426.chr6.nic protein_coding 33198308,33197762,33195570,33195363,33194945,33193587 33198913,33197941,33196606,33195454,33195050,33194829 Gene ID= ENSG00000204231.10 TPM= 3.17 Transcript Type= NA chr6 33193588 33200688 33193588 33200688 - ENST00000374680.3@RXRB ENST00000374680.3 protein_coding 33200242,33199169,33198308,33197762,33196434,33195907,33195570,33195363,33194945,33193588 33200688,33199416,33198464,33197941,33196606,33196036,33195702,33195454,33195050,33194829 Gene ID= ENSG00000204231.10 TPM= 24 Transcript Type= protein_coding chr6 33200826 33204439 33200826 33204439 + ENST00000374675.7@SLC39A7 ENST00000374675.7 protein_coding 33200826,33201242,33201745,33202072,33202263,33202560,33202910,33203541 33200938,33201656,33201913,33202125,33202427,33202700,33203106,33204439 Gene ID= ENSG00000112473.17 TPM= 45.28 Transcript Type= protein_coding chr6 33200873 33204439 33200873 33204439 + ENST00000374677.7@SLC39A7 ENST00000374677.7 protein_coding 33200873,33201745,33202072,33202263,33202560,33202910,33203541 33201656,33201913,33202125,33202427,33202700,33203106,33204439 Gene ID= ENSG00000112473.17 TPM= 33.51 Transcript Type= protein_coding chr6 33204631 33206832 33204631 33206832 + transcript1425.chr6.nnic@HSD17B8 transcript1425.chr6.nnic protein_coding 33204631,33204902,33205221,33205447,33205640,33206134,33206375,33206638 33204720,33205119,33205337,33205539,33205725,33206176,33206449,33206832 Gene ID= ENSG00000204228.3 TPM= 1.81 Transcript Type= NA chr6 33204642 33206831 33204642 33206831 + ENST00000374662.3@HSD17B8 ENST00000374662.3 protein_coding 33204642,33204902,33205221,33205447,33205640,33205828,33206134,33206375,33206638 33204720,33205119,33205337,33205539,33205725,33205912,33206176,33206449,33206831 Gene ID= ENSG00000204228.3 TPM= 37.13 Transcript Type= protein_coding chr6 33208495 33212722 33208495 33212722 + ENST00000374656.4@RING1 ENST00000374656.4 protein_coding 33208495,33208765,33209626,33209915,33211158,33211729,33212298 33208644,33208900,33209786,33210130,33211547,33212002,33212722 Gene ID= ENSG00000204227.4 TPM= 12.68 Transcript Type= protein_coding chr6 33250272 33271894 33250272 33271894 - ENST00000445902.2@VPS52 ENST00000445902.2 protein_coding 33271586,33270199,33269999,33269744,33269490,33269014,33268499,33268108,33267865,33267682,33267188,33266557,33264782,33264374,33264008,33263772,33263484,33251860,33251518,33250272 33271894,33270283,33270051,33269819,33269557,33269189,33268649,33268208,33267997,33267739,33267321,33266712,33264900,33264497,33264103,33263879,33263549,33251971,33251636,33250987 Gene ID= ENSG00000223501.8 TPM= 69.73 Transcript Type= protein_coding chr6 33272010 33276510 33272010 33276510 + ENST00000439602.6@RPS18 ENST00000439602.6 protein_coding 33272010,33272628,33275797,33275965,33276176,33276391 33272122,33272726,33275883,33276066,33276267,33276510 Gene ID= ENSG00000231500.6 TPM= 534.27 Transcript Type= protein_coding chr6 33272075 33276510 33272075 33276510 + ENST00000474973.5@RPS18 ENST00000474973.5 protein_coding 33272075,33272587,33275797,33275965,33276176,33276391 33272122,33272726,33275883,33276066,33276267,33276510 Gene ID= ENSG00000231500.6 TPM= 6.34 Transcript Type= protein_coding chr6 33279107 33289259 33279107 33289259 - transcript1445.chr6.nnic@WDR46 transcript1445.chr6.nnic protein_coding 33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33284285,33280674,33280428,33279764,33279497,33279107 33289259,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33284390,33280987,33280522,33279859,33279610,33279374 Gene ID= ENSG00000227057.9 TPM= 3.62 Transcript Type= NA chr6 33279108 33289527 33279108 33289527 - ENST00000374617.8@WDR46 ENST00000374617.8 protein_coding 33289102,33288804,33288614,33288358,33288148,33287965,33287614,33287355,33287091,33286795,33280674,33280428,33279764,33279497,33279108 33289527,33289013,33288694,33288470,33288235,33288026,33287718,33287505,33287226,33286894,33280987,33280522,33279859,33279610,33279374 Gene ID= ENSG00000227057.9 TPM= 89.65 Transcript Type= protein_coding chr6 33291181 33298004 33291181 33298004 - transcript1471.chr6.nic@RGL2 transcript1471.chr6.nic protein_coding 33297931,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291181 33298004,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313 Gene ID= ENSG00000237441.9 TPM= 34.82 Transcript Type= NA chr6 33291655 33298840 33291655 33298840 - transcript1472.chr6.nic@RGL2 transcript1472.chr6.nic protein_coding 33298455,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291655 33298840,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313 Gene ID= ENSG00000237441.9 TPM= 9.46 Transcript Type= NA chr6 33291654 33299324 33291654 33299324 - ENST00000497454.5@RGL2 ENST00000497454.5 protein_coding 33298870,33298455,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654 33299324,33298651,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313 Gene ID= ENSG00000237441.9 TPM= 100.02 Transcript Type= protein_coding chr6 33291654 33298930 33291654 33298930 - ENST00000437840.6@RGL2 ENST00000437840.6 protein_coding 33298870,33297032,33296598,33296414,33296028,33295508,33295319,33295127,33294977,33294688,33294034,33293795,33293604,33293413,33293016,33292430,33291654 33298930,33297115,33296776,33296464,33296325,33295759,33295422,33295211,33295045,33294762,33294066,33293916,33293699,33293524,33293306,33292544,33292313 Gene ID= ENSG00000237441.9 TPM= 42.97 Transcript Type= processed_transcript chr6 33299694 33314387 33299694 33314387 - ENST00000434618.6@TAPBP ENST00000434618.6 protein_coding 33314005,33313694,33313217,33304989,33304297,33304128,33303955,33299694 33314387,33313864,33313477,33305387,33304638,33304217,33303989,33301771 Gene ID= ENSG00000231925.11 TPM= 306.45 Transcript Type= protein_coding chr6 33314418 33317735 33314418 33317735 - ENST00000431845.2@ZBTB22 ENST00000431845.2 protein_coding 33317653,33314418 33317735,33316985 Gene ID= ENSG00000236104.2 TPM= 100.52 Transcript Type= protein_coding chr6 33318559 33323016 33318559 33323016 - ENST00000414083.6@DAXX ENST00000414083.6 protein_coding 33322862,33320736,33320380,33320011,33319380,33318997,33318559 33323016,33321567,33320591,33320224,33319854,33319219,33318802 Gene ID= ENSG00000204209.11 TPM= 3.2 Transcript Type= protein_coding chr6 33318558 33323014 33318558 33323014 - ENST00000374542.9@DAXX ENST00000374542.9 protein_coding 33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558 33323014,33321977,33321567,33320591,33320224,33319854,33319219,33318802 Gene ID= ENSG00000204209.11 TPM= 77.68 Transcript Type= protein_coding chr6 33318558 33323010 33318558 33323010 - ENST00000266000.10@DAXX ENST00000266000.10 protein_coding 33322862,33321719,33320736,33320380,33320011,33319380,33318997,33318558 33323010,33321974,33321567,33320591,33320224,33319854,33319219,33318802 Gene ID= ENSG00000204209.11 TPM= 45.98 Transcript Type= protein_coding chr6 33391536 33409924 33391536 33409924 + ENST00000428849.6@KIFC1 ENST00000428849.6 protein_coding 33391536,33398029,33398288,33403314,33403485,33403729,33404852,33406196,33406592,33406800,33409646 33391997,33398166,33398387,33403367,33403535,33404129,33405631,33406486,33406665,33406875,33409924 Gene ID= ENSG00000237649.7 TPM= 2.72 Transcript Type= protein_coding chr6 33410961 33416453 33410961 33416453 + ENST00000374516.7@PHF1 ENST00000374516.7 protein_coding 33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414955,33415235,33415590,33415810 33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415329,33415670,33416453 Gene ID= ENSG00000112511.17 TPM= 46.34 Transcript Type= protein_coding chr6 33410961 33416453 33410961 33416453 + ENST00000374512.7@PHF1 ENST00000374512.7 protein_coding 33410961,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33414966,33415590,33415810 33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33414829,33415144,33415670,33416453 Gene ID= ENSG00000112511.17 TPM= 2.26 Transcript Type= protein_coding chr6 33410996 33416452 33410996 33416452 + transcript1545.chr6.nic@PHF1 transcript1545.chr6.nic protein_coding 33410996,33412248,33412508,33412698,33413196,33413409,33413736,33414041,33414243,33414477,33414725,33415235,33415590,33415810 33411215,33412422,33412589,33412793,33413296,33413557,33413831,33414109,33414366,33414544,33415144,33415329,33415670,33416452 Gene ID= ENSG00000112511.17 TPM= 5.89 Transcript Type= NA chr6 33410996 33416452 33410996 33416452 + transcript1551.chr6.nic@PHF1 transcript1551.chr6.nic protein_coding 33410996,33412248,33412508,33412698,33413196,33413409,33414041,33414243,33414477,33414725,33415235,33415590,33415810 33411215,33412422,33412589,33412793,33413296,33413831,33414109,33414366,33414544,33415144,33415329,33415670,33416452 Gene ID= ENSG00000112511.17 TPM= 5.89 Transcript Type= NA chr6 33416442 33418317 33416442 33418317 - ENST00000374500.9@CUTA ENST00000374500.9 protein_coding 33418087,33417481,33417251,33417097,33416920,33416442 33418317,33417695,33417310,33417142,33416969,33416776 Gene ID= ENSG00000112514.15 TPM= 58.56 Transcript Type= protein_coding chr6 33416544 33418274 33416544 33418274 - transcript1562.chr6.nnic@CUTA transcript1562.chr6.nnic protein_coding 33418087,33417481,33417251,33417097,33416920,33416544 33418274,33417816,33417310,33417142,33416969,33416776 Gene ID= ENSG00000112514.15 TPM= 8.76 Transcript Type= NA chr6 33416543 33418122 33416543 33418122 - ENST00000488034.5@CUTA ENST00000488034.5 protein_coding 33417959,33417481,33417251,33417097,33416920,33416543 33418122,33417695,33417310,33417142,33416969,33416776 Gene ID= ENSG00000112514.15 TPM= 85.73 Transcript Type= protein_coding chr6 33416561 33418108 33416561 33418108 - ENST00000487637.1@CUTA ENST00000487637.1 protein_coding 33417481,33416561 33418108,33417310 Gene ID= ENSG00000112514.15 TPM= 1.81 Transcript Type= retained_intron chr6 33454579 33457548 33454579 33457548 + ENST00000395064.2@ZBTB9 ENST00000395064.2 protein_coding 33454579,33455030 33454775,33457548 Gene ID= ENSG00000213588.5 TPM= 24.45 Transcript Type= protein_coding chr6 33572547 33580293 33572547 33580293 - ENST00000442998.6@BAK1 ENST00000442998.6 protein_coding 33580025,33577535,33575793,33575298,33574506,33574034,33572547 33580293,33577635,33575928,33575441,33574525,33574214,33573907 Gene ID= ENSG00000030110.12 TPM= 5.43 Transcript Type= protein_coding chr6 33572545 33580275 33572545 33580275 - transcript1569.chr6.nnic@BAK1 transcript1569.chr6.nnic protein_coding 33580025,33577798,33577535,33575793,33575298,33574034,33572545 33580275,33577908,33577635,33575928,33575441,33574214,33573907 Gene ID= ENSG00000030110.12 TPM= 3.62 Transcript Type= NA chr6 33572545 33580296 33572545 33580296 - transcript1570.chr6.nnic@BAK1 transcript1570.chr6.nnic protein_coding 33580025,33577535,33575793,33575298,33574034,33572545 33580296,33577635,33575866,33575441,33574214,33573907 Gene ID= ENSG00000030110.12 TPM= 6.34 Transcript Type= NA chr6 33572545 33577352 33572545 33577352 - transcript1576.chr6.nnic@BAK1 transcript1576.chr6.nnic protein_coding 33577299,33575793,33575298,33574034,33572545 33577352,33575928,33575441,33574214,33573907 Gene ID= ENSG00000030110.12 TPM= 3.62 Transcript Type= NA chr6 33572552 33580242 33572552 33580242 - ENST00000374467.3@BAK1 ENST00000374467.3 protein_coding 33580025,33577535,33575793,33575298,33574034,33572552 33580242,33577635,33575928,33575441,33574214,33573907 Gene ID= ENSG00000030110.12 TPM= 58.86 Transcript Type= protein_coding chr6 33620365 33696574 33620365 33696574 + ENST00000374316.9@ITPR3 ENST00000374316.9 protein_coding 33620365,33620615,33640484,33655766,33657932,33658670,33659021,33659466,33662528,33662911,33663500,33663738,33664870,33665053,33665835,33667129,33667792,33668515,33668974,33670325,33670671,33671165,33672029,33673591,33674208,33675691,33676768,33677015,33677504,33678421,33678639,33679882,33680329,33680555,33682524,33683207,33684020,33684357,33684598,33684774,33685359,33685643,33686053,33686409,33687009,33687226,33687478,33688057,33688239,33688656,33689238,33690034,33690917,33691615,33691801,33692728,33693545,33694924,33695712 33620436,33621691,33640554,33655887,33658018,33658828,33659119,33659549,33662674,33663006,33663550,33663880,33664969,33665213,33665976,33667290,33667964,33668634,33669156,33670576,33670815,33671306,33672228,33673720,33674265,33675856,33676932,33677089,33677629,33678543,33678839,33680133,33680454,33680680,33682644,33683397,33684168,33684465,33684688,33684943,33685533,33685827,33686253,33686519,33687104,33687327,33687564,33688167,33688431,33688781,33689410,33690198,33691109,33691719,33691928,33692893,33693705,33695085,33696574 Gene ID= ENSG00000096433.10 TPM= 21.73 Transcript Type= protein_coding chr6 33694284 33711727 33694284 33711727 - transcript1588.chr6.nic@UQCC2 transcript1588.chr6.nic protein_coding 33711549,33701346,33694284 33711727,33701420,33700513 Gene ID= ENSG00000137288.9 TPM= 5.43 Transcript Type= NA chr6 33696761 33711727 33696761 33711727 - ENST00000607484.5@UQCC2 ENST00000607484.5 protein_coding 33711549,33701346,33700444,33696761 33711727,33701420,33700513,33697750 Gene ID= ENSG00000137288.9 TPM= 53.43 Transcript Type= protein_coding chr6 33771202 33789136 33771202 33789136 - ENST00000293760.9@LEMD2 ENST00000293760.9 protein_coding 33788381,33786734,33784352,33781077,33780100,33778242,33777138,33776954,33771202 33789136,33786774,33784427,33781153,33780179,33778387,33777239,33777056,33772778 Gene ID= ENSG00000161904.11 TPM= 277.4 Transcript Type= protein_coding chr6 34236873 34246231 34236873 34246231 + ENST00000401473.7@HMGA1 ENST00000401473.7 protein_coding 34236873,34237204,34240737,34242712,34243468,34244831 34236963,34237317,34240882,34242795,34243518,34246231 Gene ID= ENSG00000137309.19 TPM= 5.43 Transcript Type= protein_coding chr6 34236873 34246231 34236873 34246231 + ENST00000311487.9@HMGA1 ENST00000311487.9 protein_coding 34236873,34237204,34240737,34242712,34243468,34244831 34236963,34237317,34240915,34242795,34243518,34246231 Gene ID= ENSG00000137309.19 TPM= 8.15 Transcript Type= protein_coding chr6 34246381 34249108 34246381 34249108 - ENST00000636500.1@SMIM29 ENST00000636500.1 protein_coding 34248727,34247681,34247467,34247044,34246381 34249108,34247864,34247492,34247149,34246868 Gene ID= ENSG00000186577.12 TPM= 3.78 Transcript Type= protein_coding chr6 34246380 34249470 34246380 34249470 - ENST00000476320.5@SMIM29 ENST00000476320.5 protein_coding 34248979,34247681,34247467,34247044,34246380 34249470,34247864,34247492,34247149,34246868 Gene ID= ENSG00000186577.12 TPM= 36.83 Transcript Type= protein_coding chr6 34246395 34249040 34246395 34249040 - ENST00000394990.8@SMIM29 ENST00000394990.8 protein_coding 34248979,34247741,34247467,34247044,34246395 34249040,34247864,34247492,34247149,34246868 Gene ID= ENSG00000186577.12 TPM= 5.59 Transcript Type= protein_coding chr6 34279679 34392674 34279679 34392674 - ENST00000607016.1@NUDT3 ENST00000607016.1 protein_coding 34392264,34341862,34295641,34293451,34279679 34392674,34341972,34295685,34293535,34288931 Gene ID= ENSG00000272325.1 TPM= 102.33 Transcript Type= protein_coding chr6 34417454 34426125 34417454 34426125 - ENST00000326199.12@RPS10 ENST00000326199.12 protein_coding 34426032,34425072,34424669,34421730,34418369,34417454 34426125,34425221,34424840,34421807,34418424,34417547 Gene ID= ENSG00000124614.13 TPM= 228.65 Transcript Type= protein_coding chr6 34417466 34426041 34417466 34426041 - ENST00000621356.2@RPS10 ENST00000621356.2 protein_coding 34425796,34425072,34424669,34421730,34418369,34417466 34426041,34425221,34424840,34421807,34418424,34417547 Gene ID= ENSG00000124614.13 TPM= 14.94 Transcript Type= protein_coding chr6 34696945 34697470 34696945 34697470 + ENST00000606496.1@AL451165.2 ENST00000606496.1 antisense_RNA 34696945,34697159 34696997,34697470 Gene ID= ENSG00000272288.5 TPM= 3.62 Transcript Type= antisense_RNA chr6 34792080 34877514 34792080 34877514 + ENST00000192788.5@UHRF1BP1 ENST00000192788.5 protein_coding 34792080,34821653,34821917,34823257,34834217,34834721,34835294,34836156,34855617,34856239,34856790,34857329,34857724,34858124,34864002,34867225,34867466,34870854,34871584,34871819,34872313 34792294,34821815,34821955,34823348,34834406,34834861,34835464,34836348,34855703,34856409,34856929,34857470,34857917,34859571,34864198,34867379,34867616,34871116,34871692,34871925,34877514 Gene ID= ENSG00000065060.16 TPM= 2.72 Transcript Type= protein_coding chr6 34877778 34888089 34877778 34888089 - ENST00000361288.8@TAF11 ENST00000361288.8 protein_coding 34887787,34882932,34880289,34879967,34877778 34888089,34883080,34880376,34880063,34878720 Gene ID= ENSG00000064995.16 TPM= 30.79 Transcript Type= protein_coding chr6 34889250 35091411 34889250 35091411 + transcript1632.chr6.nnic@ANKS1A transcript1632.chr6.nnic protein_coding 34889250,34967239,34970010,34972581,34981690,34982752,34983113,34983324,34985082,34989224,34994302,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606 34889599,34967319,34970166,34972643,34981986,34982827,34983214,34983425,34985278,34989316,34994422,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091411 Gene ID= ENSG00000064999.13 TPM= 11.77 Transcript Type= NA chr6 35017032 35091411 35017032 35091411 + transcript1639.chr6.nic@ANKS1A transcript1639.chr6.nic protein_coding 35017032,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606 35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091411 Gene ID= ENSG00000064999.13 TPM= 9.96 Transcript Type= NA chr6 34889265 35091413 34889265 35091413 + ENST00000360359.4@ANKS1A ENST00000360359.4 protein_coding 34889265,34967239,34970010,34981690,34982752,34983113,34983324,34985082,34989224,34994302,35017473,35054099,35060147,35078558,35079516,35079821,35080994,35082691,35083155,35083417,35084121,35085766,35086952,35088606 34889599,34967319,34970166,34981986,34982827,34983214,34983425,34985278,34989316,34994422,35018059,35054165,35060253,35078656,35079668,35079928,35081158,35082816,35083226,35083503,35084258,35085936,35087049,35091413 Gene ID= ENSG00000064999.13 TPM= 40.75 Transcript Type= protein_coding chr6 35259707 35295983 35259707 35295983 + transcript1655.chr6.nnic@ZNF76 transcript1655.chr6.nnic protein_coding 35259707,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35294780,35295144 35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35294907,35295983 Gene ID= ENSG00000065029.14 TPM= 3.75 Transcript Type= NA chr6 35259510 35295984 35259510 35295984 + transcript1658.chr6.nic@ZNF76 transcript1658.chr6.nic protein_coding 35259510,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35295144 35259727,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35295984 Gene ID= ENSG00000065029.14 TPM= 11.9 Transcript Type= NA chr6 35259672 35295985 35259672 35295985 + ENST00000373953.7@ZNF76 ENST00000373953.7 protein_coding 35259672,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35293751,35294456,35295144 35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35293915,35294569,35295985 Gene ID= ENSG00000065029.14 TPM= 34.54 Transcript Type= protein_coding chr6 35259510 35295984 35259510 35295984 + transcript1668.chr6.nic@ZNF76 transcript1668.chr6.nic protein_coding 35259510,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144 35259727,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295984 Gene ID= ENSG00000065029.14 TPM= 7.37 Transcript Type= NA chr6 35259774 35295983 35259774 35295983 + ENST00000339411.5@ZNF76 ENST00000339411.5 protein_coding 35259774,35281056,35286128,35286322,35287646,35290266,35290641,35291278,35291558,35292554,35292881,35294456,35295144 35259841,35281224,35286208,35286399,35287845,35290382,35290716,35291403,35291737,35292787,35293044,35294569,35295983 Gene ID= ENSG00000065029.14 TPM= 6.47 Transcript Type= protein_coding chr6 35297852 35321771 35297852 35321771 + ENST00000316637.6@DEF6 ENST00000316637.6 protein_coding 35297852,35309670,35310459,35312302,35312626,35317891,35318173,35319524,35319819,35320884,35321187 35297952,35309810,35310644,35312538,35312772,35317999,35318471,35319690,35320017,35320974,35321771 Gene ID= ENSG00000023892.10 TPM= 15.39 Transcript Type= protein_coding chr6 35342537 35428184 35342537 35428184 + transcript1680.chr6.nnic@PPARD transcript1680.chr6.nnic protein_coding 35342537,35347067,35383577,35410987,35420127,35421820,35423946,35424329,35425832 35342681,35347150,35383891,35411217,35420281,35421958,35424148,35424779,35428184 Gene ID= ENSG00000112033.13 TPM= 5.81 Transcript Type= NA chr6 35342537 35428176 35342537 35428176 + transcript1683.chr6.nnic@PPARD transcript1683.chr6.nnic protein_coding 35342537,35347067,35410987,35420127,35421820,35423946,35424329,35425948 35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428176 Gene ID= ENSG00000112033.13 TPM= 3.4 Transcript Type= NA chr6 35342558 35428191 35342558 35428191 + ENST00000360694.7@PPARD ENST00000360694.7 protein_coding 35342558,35347067,35410987,35420127,35421820,35423946,35424329,35425832 35342681,35347150,35411217,35420281,35421958,35424148,35424779,35428191 Gene ID= ENSG00000112033.13 TPM= 16.68 Transcript Type= protein_coding chr6 35347925 35428184 35347925 35428184 + transcript1687.chr6.nnic@PPARD transcript1687.chr6.nnic protein_coding 35347925,35410987,35420127,35421820,35423946,35424329,35425832 35349003,35411217,35420281,35421958,35424148,35424779,35428184 Gene ID= ENSG00000112033.13 TPM= 5.81 Transcript Type= NA chr6 35342537 35385626 35342537 35385626 + transcript1693.chr6.nnic@PPARD transcript1693.chr6.nnic protein_coding 35342537,35347067,35383577 35342681,35347150,35385626 Gene ID= ENSG00000112033.13 TPM= 1.81 Transcript Type= NA chr6 35452330 35467104 35452330 35467104 + transcript1698.chr6.nnic@FANCE transcript1698.chr6.nnic protein_coding 35452330,35455747,35457556,35457916,35458297,35459331,35459682,35460552,35466244 35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35467104 Gene ID= ENSG00000112039.3 TPM= 1.81 Transcript Type= NA chr6 35452361 35467103 35452361 35467103 + ENST00000229769.2@FANCE ENST00000229769.2 protein_coding 35452361,35455747,35457556,35457916,35458297,35459331,35459682,35460552,35462789,35466244 35452793,35456353,35457600,35457984,35458440,35459454,35459760,35460618,35462914,35467103 Gene ID= ENSG00000112039.3 TPM= 6.34 Transcript Type= protein_coding chr6 35468408 35470785 35468408 35470785 + ENST00000322203.6@RPL10A ENST00000322203.6 protein_coding 35468408,35468799,35468947,35469381,35470179,35470580 35468439,35468873,35469027,35469529,35470351,35470785 Gene ID= ENSG00000198755.10 TPM= 595.67 Transcript Type= protein_coding chr6 35468408 35470785 35468408 35470785 + ENST00000467020.5@RPL10A ENST00000467020.5 protein_coding 35468408,35468799,35468947,35470179,35470580 35468439,35468873,35469529,35470351,35470785 Gene ID= ENSG00000198755.10 TPM= 10.23 Transcript Type= processed_transcript chr6 35468420 35470785 35468420 35470785 + ENST00000478340.2@RPL10A ENST00000478340.2 protein_coding 35468420,35468799,35468947,35469381,35470179,35470580 35468439,35468873,35469285,35469529,35470351,35470785 Gene ID= ENSG00000198755.10 TPM= 5.7 Transcript Type= processed_transcript chr6 35468420 35470785 35468420 35470785 + ENST00000464112.5@RPL10A ENST00000464112.5 protein_coding 35468420,35468947,35469381,35470179,35470580 35468873,35469027,35469529,35470351,35470785 Gene ID= ENSG00000198755.10 TPM= 15.21 Transcript Type= processed_transcript chr6 35473597 35497076 35473597 35497076 - ENST00000338863.11@TEAD3 ENST00000338863.11 protein_coding 35496898,35486461,35484560,35480312,35479305,35478434,35478275,35477311,35476302,35475919,35475566,35475336,35473597 35497076,35486711,35484624,35480374,35479316,35478571,35478324,35477372,35476435,35476092,35475706,35475488,35475157 Gene ID= ENSG00000007866.19 TPM= 16.3 Transcript Type= protein_coding chr6 35573209 35688915 35573209 35688915 - transcript1725.chr6.nnic@FKBP5 transcript1725.chr6.nnic protein_coding 35688094,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573209 35688915,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942 Gene ID= ENSG00000096060.14 TPM= 5.32 Transcript Type= NA chr6 35573590 35688937 35573590 35688937 - ENST00000357266.8@FKBP5 ENST00000357266.8 protein_coding 35688804,35642720,35637014,35620132,35619096,35597248,35591130,35587034,35580036,35576994,35573590 35688937,35642843,35637158,35620274,35619210,35597404,35591220,35587117,35580221,35577233,35575942 Gene ID= ENSG00000096060.14 TPM= 137.37 Transcript Type= protein_coding chr6 35832966 35921342 35832966 35921342 - ENST00000373825.6@SRPK1 ENST00000373825.6 protein_coding 35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35832966 35921342,35920528,35891013,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488 Gene ID= ENSG00000096063.15 TPM= 16.75 Transcript Type= protein_coding chr6 35833034 35921147 35833034 35921147 - ENST00000423325.6@SRPK1 ENST00000423325.6 protein_coding 35921044,35920468,35890895,35888815,35888024,35886724,35874233,35872563,35870934,35870281,35869482,35869010,35857261,35842535,35838337,35833034 35921147,35920528,35891041,35888923,35888111,35886811,35874339,35872728,35870959,35870494,35869901,35869110,35857368,35842604,35838429,35835488 Gene ID= ENSG00000096063.15 TPM= 3.17 Transcript Type= protein_coding chr6 36028813 36110758 36028813 36110758 + transcript1744.chr6.nnic@MAPK14 transcript1744.chr6.nnic protein_coding 36028813,36052699,36059289,36072873,36073691,36074049,36075848,36076537,36095987,36102571,36107455,36108380 36028910,36052828,36059347,36072984,36073720,36074096,36075962,36076608,36096066,36102649,36107628,36110758 Gene ID= ENSG00000112062.10 TPM= 3.32 Transcript Type= NA chr6 36027770 36110755 36027770 36110755 + ENST00000229794.8@MAPK14 ENST00000229794.8 protein_coding 36027770,36052699,36059289,36072873,36073691,36074049,36075848,36076537,36095987,36102571,36107455,36108380 36028273,36052828,36059347,36072984,36073720,36074096,36075962,36076608,36096066,36102649,36107628,36110755 Gene ID= ENSG00000112062.10 TPM= 44.07 Transcript Type= protein_coding chr6 36027711 36111236 36027711 36111236 + ENST00000229795.7@MAPK14 ENST00000229795.7 protein_coding 36027711,36052699,36059289,36072873,36073691,36074049,36075848,36076537,36100188,36102571,36107455,36108380 36028273,36052828,36059347,36072984,36073720,36074096,36075962,36076608,36100267,36102649,36107628,36111236 Gene ID= ENSG00000112062.10 TPM= 19.62 Transcript Type= protein_coding chr6 36130321 36140065 36130321 36140065 + ENST00000211287.8@MAPK13 ENST00000211287.8 protein_coding 36130321,36131271,36132621,36135753,36136019,36136484,36136656,36136879,36138365,36138702,36138879,36139294 36130701,36131400,36132679,36135861,36136048,36136531,36136770,36136950,36138444,36138780,36139055,36140065 Gene ID= ENSG00000156711.16 TPM= 134.02 Transcript Type= protein_coding chr6 36130484 36144524 36130484 36144524 + ENST00000373766.9@MAPK13 ENST00000373766.9 protein_coding 36130484,36131271,36132621,36135753,36136019,36136484,36136656,36138702,36138879,36139294 36130701,36131400,36132679,36135861,36136048,36136531,36136770,36138780,36139055,36144524 Gene ID= ENSG00000156711.16 TPM= 24.45 Transcript Type= protein_coding chr6 36197385 36232790 36197385 36232790 + transcript1753.chr6.nic@BRPF3 transcript1753.chr6.nic protein_coding 36197385,36200297,36204658,36207313,36209787,36210216,36211258,36213880,36217917,36222168,36225267,36228902,36230426 36197620,36201770,36204814,36207444,36209915,36210528,36211560,36214386,36218010,36222265,36225364,36229056,36232790 Gene ID= ENSG00000096070.19 TPM= 7.4 Transcript Type= NA chr6 36196767 36229748 36196767 36229748 + transcript1756.chr6.nic@BRPF3 transcript1756.chr6.nic protein_coding 36196767,36200297,36204658,36207313,36209787,36210216,36211258,36213880,36217917,36222168,36225267,36228902 36196970,36201770,36204814,36207444,36209915,36210528,36211560,36214386,36218010,36222265,36225364,36229748 Gene ID= ENSG00000096070.19 TPM= 1.81 Transcript Type= NA chr6 36200406 36232790 36200406 36232790 + ENST00000441123.1@BRPF3 ENST00000441123.1 protein_coding 36200406,36204658,36207313,36209787,36210201,36211258,36213880,36217917,36230426 36201770,36204814,36207444,36209915,36210528,36211560,36214386,36218010,36232790 Gene ID= ENSG00000096070.19 TPM= 6.04 Transcript Type= nonsense_mediated_decay chr6 36196744 36232790 36196744 36232790 + ENST00000357641.10@BRPF3 ENST00000357641.10 protein_coding 36196744,36200297,36204658,36207313,36209787,36210216,36211258,36213880,36217917,36222168,36225267,36228902,36230426 36196970,36201770,36204814,36207444,36209915,36210528,36211560,36214386,36218010,36222265,36225364,36229056,36232790 Gene ID= ENSG00000096070.19 TPM= 20.98 Transcript Type= protein_coding chr6 36442767 36491143 36442767 36491143 + ENST00000373731.6@KCTD20 ENST00000373731.6 protein_coding 36442767,36470052,36474789,36479121,36479591,36481562,36484714,36486883 36443111,36470257,36475062,36479223,36479711,36481759,36484824,36491143 Gene ID= ENSG00000112078.13 TPM= 27.62 Transcript Type= protein_coding chr6 36442767 36491143 36442767 36491143 + ENST00000536244.5@KCTD20 ENST00000536244.5 protein_coding 36442767,36470052,36479121,36479591,36481562,36484714,36486883 36443111,36470257,36479223,36479711,36481759,36484824,36491143 Gene ID= ENSG00000112078.13 TPM= 7.7 Transcript Type= protein_coding chr6 36493899 36547488 36493899 36547488 - transcript1775.chr6.nnic@STK38 transcript1775.chr6.nnic protein_coding 36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493899 36547488,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36494637 Gene ID= ENSG00000112079.8 TPM= 1.81 Transcript Type= NA chr6 36493892 36547470 36493892 36547470 - ENST00000229812.7@STK38 ENST00000229812.7 protein_coding 36547190,36540072,36525591,36524341,36521734,36517717,36515338,36507500,36506583,36499873,36498363,36497780,36496711,36493892 36547470,36540207,36525642,36524463,36521817,36517840,36515492,36507602,36506644,36499990,36498486,36497875,36496805,36495914 Gene ID= ENSG00000112079.8 TPM= 31.69 Transcript Type= protein_coding chr6 36594360 36602958 36594360 36602958 + transcript1777.chr6.nic@SRSF3 transcript1777.chr6.nic protein_coding 36594360,36596761,36598849,36599821,36601708,36601962 36594481,36596968,36598983,36601190,36601794,36602958 Gene ID= ENSG00000112081.16 TPM= 3.62 Transcript Type= NA chr6 36678710 36687337 36678710 36687337 + ENST00000405375.5@CDKN1A ENST00000405375.5 protein_coding 36678710,36684097,36685751 36678939,36684546,36687337 Gene ID= ENSG00000124762.13 TPM= 38.03 Transcript Type= protein_coding chr6 36854827 36875024 36854827 36875024 - ENST00000373699.5@PPIL1 ENST00000373699.5 protein_coding 36874717,36871718,36856586,36854827 36875024,36871872,36856654,36856033 Gene ID= ENSG00000137168.7 TPM= 34.41 Transcript Type= protein_coding chr6 36854827 36858635 36854827 36858635 - ENST00000483552.1@PPIL1 ENST00000483552.1 protein_coding 36858565,36856586,36854827 36858635,36856654,36856033 Gene ID= ENSG00000137168.7 TPM= 11.77 Transcript Type= processed_transcript chr6 36885854 36928964 36885854 36928964 + ENST00000480824.6@C6orf89 ENST00000480824.6 protein_coding 36885854,36894504,36899426,36902221,36914284,36914554,36916445,36919578,36923347 36886028,36894603,36899633,36902434,36914435,36914693,36916574,36919701,36928964 Gene ID= ENSG00000198663.16 TPM= 30.34 Transcript Type= protein_coding chr6 36885864 36923522 36885864 36923522 + ENST00000355190.7@C6orf89 ENST00000355190.7 protein_coding 36885864,36899426,36902221,36914284,36914554,36916445,36919578,36923347 36886028,36899633,36902434,36914435,36914693,36916574,36919701,36923522 Gene ID= ENSG00000198663.16 TPM= 8.6 Transcript Type= protein_coding chr6 37005647 37029070 37005647 37029070 + ENST00000274963.12@FGD2 ENST00000274963.12 protein_coding 37005647,37008834,37010973,37011706,37013609,37013962,37014646,37014892,37015768,37020541,37020709,37021512,37022239,37025792,37027429,37027948 37005885,37009065,37011050,37011854,37013765,37014100,37014704,37015038,37015860,37020620,37020739,37021604,37022370,37025938,37027575,37029070 Gene ID= ENSG00000146192.14 TPM= 13.58 Transcript Type= protein_coding chr6 37170203 37175426 37170203 37175426 + ENST00000373509.5@PIM1 ENST00000373509.5 protein_coding 37170203,37170773,37170981,37171125,37172996,37173934 37170657,37170879,37171031,37171491,37173172,37175426 Gene ID= ENSG00000137193.13 TPM= 33.51 Transcript Type= protein_coding chr6 37257772 37332970 37257772 37332970 + ENST00000373491.3@TBC1D22B ENST00000373491.3 protein_coding 37257772,37269594,37279304,37282185,37282882,37284336,37287007,37291243,37312918,37313816,37316703,37317111,37331044 37257973,37269650,37279611,37282364,37282952,37284464,37287072,37291357,37313024,37313891,37316830,37317206,37332970 Gene ID= ENSG00000065491.8 TPM= 19.92 Transcript Type= protein_coding chr6 37353972 37394738 37353972 37394738 + ENST00000373479.8@RNF8 ENST00000373479.8 protein_coding 37353972,37360446,37368484,37371512,37374620,37376926,37381150,37390742 37354275,37360574,37369218,37371574,37374709,37377033,37381354,37394738 Gene ID= ENSG00000112130.16 TPM= 37.13 Transcript Type= protein_coding chr6 37353983 37391241 37353983 37391241 + transcript1849.chr6.nic@RNF8 transcript1849.chr6.nic protein_coding 37353983,37360446,37368484,37371512,37376926,37381150,37390742 37354275,37360574,37369218,37371574,37377033,37381354,37391241 Gene ID= ENSG00000112130.16 TPM= 1.81 Transcript Type= NA chr6 37433199 37482843 37433199 37482843 + transcript1852.chr6.nic@CMTR1 transcript1852.chr6.nic protein_coding 37433199,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37461970,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37476126,37477592,37478409,37479147,37482492 37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37462102,37463008,37471077,37471904,37472487,37473601,37474646,37475412,37476194,37477639,37478521,37479255,37482843 Gene ID= ENSG00000137200.12 TPM= 2.26 Transcript Type= NA chr6 37433220 37481506 37433220 37481506 + ENST00000373451.8@CMTR1 ENST00000373451.8 protein_coding 37433220,37435624,37443999,37446291,37450251,37451806,37453047,37453240,37458612,37459566,37461549,37461970,37462829,37471021,37471847,37472419,37473470,37474524,37475321,37476126,37477592,37478409,37479147,37480013 37433377,37435762,37444150,37446449,37450343,37451877,37453141,37453312,37458810,37459684,37461645,37462102,37463008,37471077,37471904,37472487,37473601,37474646,37475412,37476194,37477639,37478521,37479255,37481506 Gene ID= ENSG00000137200.12 TPM= 39.39 Transcript Type= protein_coding chr6 37482920 37499922 37482920 37499922 - ENST00000373408.3@CCDC167 ENST00000373408.3 protein_coding 37499822,37485100,37484810,37482920 37499922,37485194,37484862,37483289 Gene ID= ENSG00000198937.8 TPM= 22.64 Transcript Type= protein_coding chr6 37819499 38154624 37819499 38154624 + ENST00000287218.8@ZFAND3 ENST00000287218.8 protein_coding 37819499,37929959,38061593,38082392,38116572,38152235 37820016,37929999,38061775,38082457,38116739,38154624 Gene ID= ENSG00000156639.11 TPM= 44.82 Transcript Type= protein_coding chr6 37819798 38154624 37819798 38154624 + ENST00000373391.6@ZFAND3 ENST00000373391.6 protein_coding 37819798,37929959,38061593,38116572,38152235 37820016,37929999,38061775,38116739,38154624 Gene ID= ENSG00000156639.11 TPM= 6.79 Transcript Type= protein_coding chr6 38675925 38703141 38675925 38703141 - ENST00000373365.4@GLO1 ENST00000373365.4 protein_coding 38702971,38686892,38684374,38682808,38682012,38675925 38703141,38686974,38684514,38682875,38682101,38677383 Gene ID= ENSG00000124767.6 TPM= 118.63 Transcript Type= protein_coding chr6 39104064 39115189 39104064 39115189 - ENST00000229903.4@SAYSD1 ENST00000229903.4 protein_coding 39114883,39104064 39115189,39105776 Gene ID= ENSG00000112167.9 TPM= 18.11 Transcript Type= protein_coding chr6 39188973 39229450 39188973 39229450 - ENST00000359534.3@KCNK5 ENST00000359534.3 protein_coding 39228926,39195876,39194594,39194169,39188973 39229450,39195987,39194760,39194337,39191755 Gene ID= ENSG00000164626.8 TPM= 1.81 Transcript Type= protein_coding chr6 39792366 39904868 39792366 39904868 + ENST00000274867.8@DAAM2 ENST00000274867.8 protein_coding 39792366,39856247,39860928,39864433,39864980,39867510,39868823,39870340,39871506,39873238,39875330,39878203,39878404,39879178,39883962,39887486,39888679,39891341,39891634,39896812,39897175,39898877,39900077,39901302,39901813 39792465,39856470,39861017,39864507,39865074,39867843,39868933,39870443,39871572,39873355,39875468,39878261,39878588,39879477,39884069,39887592,39888763,39891447,39891722,39896980,39897282,39898937,39900208,39901472,39904868 Gene ID= ENSG00000146122.16 TPM= 22.64 Transcript Type= protein_coding chr6 39905059 39934551 39905059 39934551 - ENST00000373188.6@MOCS1 ENST00000373188.6 protein_coding 39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39909040,39905059 39934551,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39909102,39907117 Gene ID= ENSG00000124615.17 TPM= 47.99 Transcript Type= protein_coding chr6 39905061 39934514 39905061 39934514 - transcript1885.chr6.nic@MOCS1 transcript1885.chr6.nic protein_coding 39934295,39927329,39925678,39916068,39913774,39913317,39912892,39912264,39909835,39905061 39934514,39927455,39925845,39916232,39913835,39913428,39913004,39912374,39909955,39907117 Gene ID= ENSG00000124615.17 TPM= 10.87 Transcript Type= NA chr6 41064778 41072591 41064778 41072591 - ENST00000479950.5@OARD1 ENST00000479950.5 protein_coding 41072319,41071596,41071132,41070076,41068841,41064778 41072591,41071675,41071276,41070134,41068953,41067437 Gene ID= ENSG00000124596.16 TPM= 17.66 Transcript Type= protein_coding chr6 41066475 41072489 41066475 41072489 - ENST00000463088.5@OARD1 ENST00000463088.5 protein_coding 41072335,41071596,41071132,41070076,41068841,41066475 41072489,41071675,41071276,41070134,41068953,41067437 Gene ID= ENSG00000124596.16 TPM= 2.26 Transcript Type= protein_coding chr6 41072969 41099961 41072969 41099961 + transcript1905.chr6.nnic@NFYA transcript1905.chr6.nnic protein_coding 41072969,41079029,41080811,41084046,41089579,41090204,41091546,41092912,41094396,41097357 41073084,41079164,41080897,41084192,41089710,41090309,41091694,41093085,41094497,41099961 Gene ID= ENSG00000001167.14 TPM= 1.81 Transcript Type= NA chr6 41072945 41099976 41072945 41099976 + ENST00000341376.10@NFYA ENST00000341376.10 protein_coding 41072945,41079029,41080811,41084046,41089579,41090204,41091528,41092912,41094396,41097357 41073084,41079164,41080897,41084192,41089710,41090309,41091694,41093085,41094497,41099976 Gene ID= ENSG00000001167.14 TPM= 8.15 Transcript Type= protein_coding chr6 41158507 41163176 41158507 41163176 - ENST00000373113.7@TREM2 ENST00000373113.7 protein_coding 41163043,41161263,41159792,41158873,41158507 41163176,41161613,41159882,41159066,41158780 Gene ID= ENSG00000095970.16 TPM= 6.34 Transcript Type= protein_coding chr6 41638447 41654246 41638447 41654246 + ENST00000230321.10@MDFI ENST00000230321.10 protein_coding 41638447,41638739,41646126,41649619,41653319 41638652,41638825,41646308,41649843,41654246 Gene ID= ENSG00000112559.13 TPM= 2.72 Transcript Type= protein_coding chr6 41683973 41723591 41683973 41723591 - transcript1926.chr6.nic@TFEB transcript1926.chr6.nic protein_coding 41723461,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683973 41723591,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078 Gene ID= ENSG00000112561.17 TPM= 4.15 Transcript Type= NA chr6 41683973 41734163 41683973 41734163 - transcript1927.chr6.nic@TFEB transcript1927.chr6.nic protein_coding 41732649,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683973 41734163,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078 Gene ID= ENSG00000112561.17 TPM= 3.85 Transcript Type= NA chr6 41683973 41735030 41683973 41735030 - transcript1928.chr6.nic@TFEB transcript1928.chr6.nic protein_coding 41734900,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683973 41735030,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078 Gene ID= ENSG00000112561.17 TPM= 3.24 Transcript Type= NA chr6 41683980 41735608 41683980 41735608 - ENST00000373033.5@TFEB ENST00000373033.5 protein_coding 41735350,41691001,41690663,41689731,41687908,41687753,41687094,41686090,41683980 41735608,41691235,41690917,41689811,41688028,41687809,41687169,41686237,41685078 Gene ID= ENSG00000112561.17 TPM= 32.22 Transcript Type= protein_coding chr6 41770176 41779926 41770176 41779926 - transcript1934.chr6.nnic@FRS3 transcript1934.chr6.nnic protein_coding 41779816,41778033,41776922,41776421,41775419,41772798,41771816,41770176 41779926,41778176,41777010,41776622,41775605,41772959,41771964,41771533 Gene ID= ENSG00000137218.10 TPM= 3.62 Transcript Type= NA chr6 41770176 41779900 41770176 41779900 - ENST00000373018.7@FRS3 ENST00000373018.7 protein_coding 41779816,41778033,41776922,41775419,41772798,41771816,41770176 41779900,41778176,41777010,41775605,41772959,41771964,41771533 Gene ID= ENSG00000137218.10 TPM= 9.96 Transcript Type= protein_coding chr6 41780772 41789891 41780772 41789891 + ENST00000487182.5@AL365205.1 ENST00000487182.5 protein_coding 41780772,41781350,41783462,41784935,41785337,41786128,41786762,41789232,41789568 41780826,41781520,41784238,41785072,41785540,41786332,41787825,41789336,41789891 Gene ID= ENSG00000124593.15 TPM= 3.98 Transcript Type= retained_intron chr6 41780946 41789895 41780946 41789895 + ENST00000335515.10@AL365205.1 ENST00000335515.10 protein_coding 41780946,41783462,41784131,41784935,41785337,41786128,41786762,41789232,41789568 41781520,41783605,41784238,41785072,41785540,41786332,41787825,41789336,41789895 Gene ID= ENSG00000124593.15 TPM= 3.98 Transcript Type= nonsense_mediated_decay chr6 41787665 41789896 41787665 41789896 + ENST00000398881.3@TOMM6 ENST00000398881.3 protein_coding 41787665,41789232,41789568 41787825,41789336,41789896 Gene ID= ENSG00000214736.7 TPM= 63.39 Transcript Type= protein_coding chr6 41787662 41789898 41787662 41789898 + ENST00000398884.7@TOMM6 ENST00000398884.7 protein_coding 41787662,41789232,41789531 41787825,41789336,41789898 Gene ID= ENSG00000214736.7 TPM= 32.6 Transcript Type= protein_coding chr6 41905354 41921099 41905354 41921099 - ENST00000265350.8@MED20 ENST00000265350.8 protein_coding 41921005,41916785,41909269,41905354 41921099,41916939,41909522,41907287 Gene ID= ENSG00000124641.15 TPM= 19.02 Transcript Type= protein_coding chr6 41921188 41933046 41921188 41933046 + ENST00000230340.8@BYSL ENST00000230340.8 protein_coding 41921188,41927374,41930132,41930635,41931396,41931728,41932361 41921830,41927536,41930270,41930768,41931556,41931830,41933046 Gene ID= ENSG00000112578.9 TPM= 11.77 Transcript Type= protein_coding chr6 41934933 41941848 41934933 41941848 - ENST00000372991.8@CCND3 ENST00000372991.8 protein_coding 41941452,41940370,41937235,41936559,41934933 41941848,41940585,41937394,41936695,41936107 Gene ID= ENSG00000112576.12 TPM= 400.93 Transcript Type= protein_coding chr6 41934956 42048968 41934956 42048968 - ENST00000372988.8@CCND3 ENST00000372988.8 protein_coding 42048501,41940370,41937235,41936559,41934956 42048968,41940585,41937394,41936695,41936107 Gene ID= ENSG00000112576.12 TPM= 19.51 Transcript Type= protein_coding chr6 41934956 42048894 41934956 42048894 - ENST00000415497.6@CCND3 ENST00000415497.6 protein_coding 42048501,41937235,41936559,41934956 42048894,41937394,41936695,41936107 Gene ID= ENSG00000112576.12 TPM= 13.32 Transcript Type= protein_coding chr6 42050513 42057789 42050513 42057789 + ENST00000372978.7@TAF8 ENST00000372978.7 protein_coding 42050513,42051357,42055531,42055952,42057389 42050586,42051513,42055629,42056014,42057789 Gene ID= ENSG00000137413.15 TPM= 1.81 Transcript Type= protein_coding chr6 42206802 42217881 42206802 42217881 - transcript1987.chr6.nnic@MRPS10 transcript1987.chr6.nnic protein_coding 42217802,42214280,42214120,42211781,42210488,42208858,42206802 42217881,42214344,42214218,42211917,42210596,42208947,42208372 Gene ID= ENSG00000048544.5 TPM= 5.43 Transcript Type= NA chr6 42206802 42217881 42206802 42217881 - transcript1989.chr6.nnic@MRPS10 transcript1989.chr6.nnic protein_coding 42217802,42214280,42211781,42210488,42208858,42206802 42217881,42214344,42211917,42210596,42208947,42208372 Gene ID= ENSG00000048544.5 TPM= 5.43 Transcript Type= NA chr6 42206801 42217865 42206801 42217865 - ENST00000053468.3@MRPS10 ENST00000053468.3 protein_coding 42217802,42214280,42214120,42211781,42210488,42208858,42206801 42217865,42214344,42214192,42211917,42210596,42208947,42208372 Gene ID= ENSG00000048544.5 TPM= 73.35 Transcript Type= protein_coding chr6 42224931 42452051 42224931 42452051 - ENST00000541110.5@TRERF1 ENST00000541110.5 protein_coding 42452021,42451177,42362997,42300638,42268154,42265751,42264704,42263260,42259339,42258135,42256963,42256728,42254851,42246456,42243248,42236205,42232681,42224931 42452051,42451261,42363079,42300749,42269848,42265797,42264854,42263568,42259723,42258201,42257102,42256831,42254926,42246544,42243361,42236411,42232892,42228669 Gene ID= ENSG00000124496.12 TPM= 5.43 Transcript Type= protein_coding chr6 42564062 42693504 42564062 42693504 + ENST00000372899.5@UBR2 ENST00000372899.5 protein_coding 42564062,42573734,42592151,42594191,42603588,42605721,42606589,42612171,42615071,42616002,42617240,42632552,42632805,42635418,42637011,42640209,42641582,42642416,42644214,42644473,42645466,42648118,42650284,42652023,42652491,42655621,42658024,42658240,42658646,42659656,42662184,42663258,42665409,42666167,42670092,42670660,42673791,42674126,42676056,42676783,42678539,42679724,42683055,42684794,42688216,42689569,42691032 42564397,42573993,42592229,42594304,42603718,42605859,42606651,42612291,42615178,42616090,42617338,42632715,42632904,42635546,42637194,42640270,42641692,42642481,42644336,42644536,42645590,42648170,42650386,42652071,42652645,42655723,42658133,42658320,42658824,42659855,42662277,42663419,42665512,42666245,42670240,42670715,42673887,42674193,42676191,42676873,42678669,42679832,42683111,42684871,42688386,42689670,42693504 Gene ID= ENSG00000024048.10 TPM= 3.62 Transcript Type= protein_coding chr6 42879619 42889886 42879619 42889886 + transcript2013.chr6.nnic@RPL7L1 transcript2013.chr6.nnic protein_coding 42879619,42883451,42884613,42885974,42886256,42889228 42879951,42883614,42884750,42886083,42888363,42889886 Gene ID= ENSG00000146223.14 TPM= 5.43 Transcript Type= NA chr6 42879635 42889896 42879635 42889896 + ENST00000493763.5@RPL7L1 ENST00000493763.5 protein_coding 42879635,42880861,42883451,42884613,42885974,42886256 42879951,42880966,42883614,42884750,42886083,42889896 Gene ID= ENSG00000146223.14 TPM= 78.33 Transcript Type= protein_coding chr6 42929500 42939262 42929500 42939262 + transcript2016.chr6.nnic@CNPY3 transcript2016.chr6.nnic protein_coding 42929500,42934475,42935412,42935574,42937717,42938090,42938568 42929721,42934598,42935473,42935670,42937839,42938207,42939262 Gene ID= ENSG00000137161.16 TPM= 1.81 Transcript Type= NA chr6 42929132 42939264 42929132 42939264 + transcript2021.chr6.nnic@CNPY3 transcript2021.chr6.nnic protein_coding 42929132,42935574,42937717,42938090,42938568 42929721,42935670,42937839,42938207,42939264 Gene ID= ENSG00000137161.16 TPM= 7.24 Transcript Type= NA chr6 42929479 42936357 42929479 42936357 + transcript2022.chr6.nnic@CNPY3 transcript2022.chr6.nnic protein_coding 42929479,42934475,42935412,42935574 42929721,42934598,42935473,42936357 Gene ID= ENSG00000137161.16 TPM= 4.53 Transcript Type= NA chr6 42929171 42936358 42929171 42936358 + transcript2023.chr6.nic@CNPY3 transcript2023.chr6.nic protein_coding 42929171,42934475,42935574 42929721,42934598,42936358 Gene ID= ENSG00000137161.16 TPM= 7.24 Transcript Type= NA chr6 42929200 42939287 42929200 42939287 + ENST00000372836.4@CNPY3 ENST00000372836.4 protein_coding 42929200,42934475,42935574,42937717,42938090,42938568 42929721,42934598,42935670,42937839,42938207,42939287 Gene ID= ENSG00000137161.16 TPM= 69.73 Transcript Type= protein_coding chr6 42964009 42979199 42964009 42979199 - transcript2033.chr6.nnic@PEX6 transcript2033.chr6.nnic protein_coding 42978269,42974875,42969885,42969668,42968874,42968290,42967368,42966782,42966525,42966242,42966044,42965681,42965252,42965075,42964790,42964009 42979199,42975038,42969987,42969801,42968985,42968498,42967563,42966858,42966657,42966447,42966105,42965789,42965368,42965152,42964929,42964471 Gene ID= ENSG00000124587.13 TPM= 6.34 Transcript Type= NA chr6 42963870 42979220 42963870 42979220 - ENST00000304611.12@PEX6 ENST00000304611.12 protein_coding 42978269,42974875,42974003,42969885,42969668,42968874,42968290,42967368,42966782,42966525,42966242,42966044,42965681,42965252,42965075,42964790,42963870 42979220,42975038,42974086,42969987,42969801,42968985,42968498,42967563,42966858,42966657,42966447,42966105,42965789,42965368,42965152,42964929,42964471 Gene ID= ENSG00000124587.13 TPM= 97.8 Transcript Type= protein_coding chr6 42984553 43012342 42984553 43012342 + ENST00000394110.7@PPP2R5D ENST00000394110.7 protein_coding 42984553,42989611,43006463,43006934,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149 42984704,42989688,43006606,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342 Gene ID= ENSG00000112640.14 TPM= 4.98 Transcript Type= protein_coding chr6 42984499 43012342 42984499 43012342 + ENST00000485511.5@PPP2R5D ENST00000485511.5 protein_coding 42984499,42989611,43006463,43006911,43007196,43007414,43007935,43008201,43008367,43008693,43009057,43009322,43010468,43010664,43010881,43011149 42984704,42989688,43006679,43007110,43007306,43007506,43008065,43008260,43008475,43008746,43009227,43009449,43010569,43010736,43010997,43012342 Gene ID= ENSG00000112640.14 TPM= 11.32 Transcript Type= protein_coding chr6 43012082 43013950 43012082 43013950 - transcript2049.chr6.nnic@MEA1 transcript2049.chr6.nnic protein_coding 43013898,43013115,43012926,43012082 43013950,43013389,43013028,43012621 Gene ID= ENSG00000124733.3 TPM= 87.84 Transcript Type= NA chr6 43014213 43021298 43014213 43021298 + ENST00000326974.8@KLHDC3 ENST00000326974.8 protein_coding 43014213,43017134,43017519,43017853,43018145,43018343,43018633,43018863,43019092,43019288,43020667 43014348,43017346,43017695,43017968,43018216,43018556,43018719,43018971,43019165,43019366,43021298 Gene ID= ENSG00000124702.17 TPM= 207.37 Transcript Type= protein_coding chr6 43021645 43029597 43021645 43029597 + ENST00000244496.5@RRP36 ENST00000244496.5 protein_coding 43021645,43024985,43025263,43026037,43027178,43027360,43029092 43021784,43025132,43025329,43026141,43027252,43027477,43029597 Gene ID= ENSG00000124541.6 TPM= 33.51 Transcript Type= protein_coding chr6 43037615 43053933 43037615 43053933 - transcript2062.chr6.nic@CUL7 transcript2062.chr6.nic protein_coding 43053622,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037615 43053933,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011 Gene ID= ENSG00000044090.8 TPM= 11.09 Transcript Type= NA chr6 43037615 43053862 43037615 43053862 - transcript2065.chr6.nic@CUL7 transcript2065.chr6.nic protein_coding 43053711,43052209,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037615 43053862,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011 Gene ID= ENSG00000044090.8 TPM= 8.38 Transcript Type= NA chr6 43037615 43053861 43037615 43053861 - transcript2069.chr6.nic@CUL7 transcript2069.chr6.nic protein_coding 43053622,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037615 43053861,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011 Gene ID= ENSG00000044090.8 TPM= 5.66 Transcript Type= NA chr6 43037620 43053945 43037620 43053945 - ENST00000535468.1@CUL7 ENST00000535468.1 protein_coding 43053711,43052113,43051612,43050968,43050260,43049963,43049407,43048332,43048148,43046880,43046511,43046236,43045986,43045587,43045227,43044752,43043448,43043074,43042802,43040915,43040530,43040156,43038842,43038566,43038267,43037620 43053945,43052796,43051763,43051468,43050398,43050159,43049662,43048569,43048253,43047107,43046601,43046407,43046091,43045682,43045402,43044885,43043630,43043180,43042984,43041075,43040746,43040426,43038987,43038692,43038472,43038011 Gene ID= ENSG00000044090.8 TPM= 10.19 Transcript Type= protein_coding chr6 43059594 43075099 43059594 43075099 + ENST00000347162.9@KLC4 ENST00000347162.9 protein_coding 43059594,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622 43059685,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075099 Gene ID= ENSG00000137171.14 TPM= 14.94 Transcript Type= protein_coding chr6 43059857 43075093 43059857 43075093 + ENST00000259708.7@KLC4 ENST00000259708.7 protein_coding 43059857,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622 43060238,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075093 Gene ID= ENSG00000137171.14 TPM= 13.13 Transcript Type= protein_coding chr6 43059878 43075095 43059878 43075095 + transcript2081.chr6.nic@KLC4 transcript2081.chr6.nic protein_coding 43059878,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622 43060159,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075095 Gene ID= ENSG00000137171.14 TPM= 3.17 Transcript Type= NA chr6 43059883 43075089 43059883 43075089 + ENST00000479388.5@KLC4 ENST00000479388.5 protein_coding 43059883,43061311,43062917,43065620,43066306,43066996,43070354,43070692,43071275,43071567,43071852,43072147,43072824,43073223,43073902,43074622 43060182,43061593,43063147,43065701,43066525,43067083,43070455,43070865,43071374,43071619,43071922,43072255,43072964,43073338,43073965,43075089 Gene ID= ENSG00000137171.14 TPM= 6.79 Transcript Type= protein_coding chr6 43054232 43059394 43054232 43059394 - ENST00000230413.9@MRPL2 ENST00000230413.9 protein_coding 43059286,43058065,43056307,43056081,43055897,43054232 43059394,43058233,43056445,43056196,43056007,43054486 Gene ID= ENSG00000112651.11 TPM= 2.72 Transcript Type= protein_coding chr6 43076268 43161719 43076268 43161719 + ENST00000230419.8@PTK7 ENST00000230419.8 protein_coding 43076268,43128977,43129727,43130230,43130511,43132016,43132421,43138849,43139136,43139406,43141668,43141931,43142172,43143417,43144451,43145200,43146618,43158817,43159788,43160721 43076567,43129264,43129829,43130420,43130661,43132164,43132687,43138982,43139271,43139525,43141817,43142081,43142299,43143620,43144606,43145432,43146698,43158968,43159966,43161719 Gene ID= ENSG00000112655.15 TPM= 19.02 Transcript Type= protein_coding chr6 43171299 43181507 43171299 43181507 + ENST00000265354.5@SRF ENST00000265354.5 protein_coding 43171299,43173847,43175706,43176548,43178294,43178806,43179095 43172169,43174113,43175967,43176667,43178485,43178882,43181507 Gene ID= ENSG00000112658.7 TPM= 36.22 Transcript Type= protein_coding chr6 43225629 43229484 43225629 43229484 - ENST00000230431.10@DNPH1 ENST00000230431.10 protein_coding 43229261,43226327,43226033,43225629 43229484,43226395,43226143,43225881 Gene ID= ENSG00000112667.12 TPM= 174.77 Transcript Type= protein_coding chr6 43225635 43229478 43225635 43229478 - ENST00000393987.2@DNPH1 ENST00000393987.2 protein_coding 43229261,43226327,43225635 43229478,43226395,43226143 Gene ID= ENSG00000112667.12 TPM= 8.15 Transcript Type= protein_coding chr6 43354166 43369687 43354166 43369687 - transcript2110.chr6.nic@ZNF318 transcript2110.chr6.nic protein_coding 43368967,43365292,43357126,43354166 43369687,43365440,43357765,43356145 Gene ID= ENSG00000171467.15 TPM= 1.81 Transcript Type= NA chr6 43336070 43369443 43336070 43369443 - ENST00000361428.2@ZNF318 ENST00000361428.2 protein_coding 43368967,43365292,43357126,43354664,43352377,43348324,43342676,43342112,43340790,43336070 43369443,43365440,43357765,43356145,43352476,43348625,43342879,43342211,43340908,43340502 Gene ID= ENSG00000171467.15 TPM= 3.62 Transcript Type= protein_coding chr6 43427545 43450428 43427545 43450428 + transcript2115.chr6.nnic@ABCC10 transcript2115.chr6.nnic protein_coding 43427545,43427968,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929 43427699,43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449010,43449204,43449534,43450428 Gene ID= ENSG00000124574.14 TPM= 1.97 Transcript Type= NA chr6 43427853 43450428 43427853 43450428 + transcript2120.chr6.nic@ABCC10 transcript2120.chr6.nic protein_coding 43427853,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929 43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450428 Gene ID= ENSG00000124574.14 TPM= 4.14 Transcript Type= NA chr6 43427854 43450428 43427854 43450428 + transcript2122.chr6.nic@ABCC10 transcript2122.chr6.nic protein_coding 43427854,43433235,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929 43427967,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450428 Gene ID= ENSG00000124574.14 TPM= 6.85 Transcript Type= NA chr6 43427865 43450428 43427865 43450428 + transcript2126.chr6.nnic@ABCC10 transcript2126.chr6.nnic protein_coding 43427865,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929 43427967,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450428 Gene ID= ENSG00000124574.14 TPM= 3.23 Transcript Type= NA chr6 43427554 43450430 43427554 43450430 + ENST00000372530.8@ABCC10 ENST00000372530.8 protein_coding 43427554,43427968,43432142,43434621,43435751,43436138,43437934,43438624,43441862,43442970,43443933,43444159,43444788,43445125,43445599,43446277,43447248,43447684,43448881,43449107,43449422,43449929 43427757,43428139,43433360,43434848,43435907,43436247,43438013,43438795,43441960,43443159,43444010,43444353,43444938,43445314,43445942,43446446,43447408,43447937,43449026,43449204,43449534,43450430 Gene ID= ENSG00000124574.14 TPM= 8.67 Transcript Type= protein_coding chr6 43477523 43506556 43477523 43506556 + ENST00000372444.6@TJAP1 ENST00000372444.6 protein_coding 43477523,43478087,43478659,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761 43477628,43478232,43478718,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506556 Gene ID= ENSG00000137221.14 TPM= 7.18 Transcript Type= protein_coding chr6 43477523 43506556 43477523 43506556 + ENST00000372445.9@TJAP1 ENST00000372445.9 protein_coding 43477523,43478087,43497881,43498975,43500744,43501526,43502283,43502588,43503401,43503623,43504761 43477628,43478232,43497977,43499100,43500772,43501687,43502349,43502617,43503508,43503706,43506556 Gene ID= ENSG00000137221.14 TPM= 4.17 Transcript Type= protein_coding chr6 43477525 43506558 43477525 43506558 + transcript2141.chr6.nic@TJAP1 transcript2141.chr6.nic protein_coding 43477525,43478087,43497881,43498975,43500744,43501526,43502283,43503401,43503623,43504761 43477628,43478232,43497977,43499136,43500772,43501687,43502349,43503508,43503706,43506558 Gene ID= ENSG00000137221.14 TPM= 3.26 Transcript Type= NA chr6 43477523 43506556 43477523 43506556 + ENST00000436109.6@TJAP1 ENST00000436109.6 protein_coding 43477523,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761 43477628,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506556 Gene ID= ENSG00000137221.14 TPM= 5.37 Transcript Type= protein_coding chr6 43477573 43506553 43477573 43506553 + ENST00000372452.5@TJAP1 ENST00000372452.5 protein_coding 43477573,43478087,43497881,43498978,43500744,43501526,43502283,43503401,43503623,43504761 43477628,43478232,43497977,43499100,43500772,43501687,43502349,43503508,43503706,43506553 Gene ID= ENSG00000137221.14 TPM= 18.05 Transcript Type= protein_coding chr6 43506969 43510686 43506969 43510686 - ENST00000372441.1@LRRC73 ENST00000372441.1 protein_coding 43509514,43508760,43508298,43507826,43507456,43506969 43510686,43508920,43508420,43507926,43507678,43507308 Gene ID= ENSG00000204052.4 TPM= 19.92 Transcript Type= protein_coding chr6 43511827 43516990 43511827 43516990 - ENST00000372422.6@YIPF3 ENST00000372422.6 protein_coding 43516727,43515889,43515595,43513588,43513359,43513069,43512761,43512440,43511827 43516990,43516095,43515701,43513633,43513451,43513200,43512874,43512563,43512315 Gene ID= ENSG00000137207.11 TPM= 282.68 Transcript Type= protein_coding chr6 43517022 43521526 43517022 43521526 + ENST00000372389.7@POLR1C ENST00000372389.7 protein_coding 43517022,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43521182 43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43521526 Gene ID= ENSG00000171453.17 TPM= 9.96 Transcript Type= protein_coding chr6 43517089 43529585 43517089 43529585 + ENST00000304004.7@POLR1C ENST00000304004.7 protein_coding 43517089,43517306,43519333,43519706,43520066,43520275,43520625,43520932,43529249 43517178,43517377,43519440,43519838,43520185,43520427,43520774,43521048,43529585 Gene ID= ENSG00000171453.17 TPM= 1.81 Transcript Type= protein_coding chr6 43522330 43576075 43522330 43576075 - ENST00000265351.11@XPO5 ENST00000265351.11 protein_coding 43575760,43573480,43572506,43570857,43570502,43568711,43567169,43565660,43562247,43560924,43560178,43558501,43555836,43553373,43551298,43549893,43549489,43548261,43547608,43546571,43533907,43531479,43530688,43528828,43528159,43527634,43526685,43525839,43525107,43524831,43524471,43522330 43576075,43573601,43572578,43570994,43570684,43568737,43567354,43565736,43562346,43561007,43560303,43558591,43555964,43553503,43551453,43549934,43549578,43548460,43547707,43546752,43534007,43531575,43530824,43528925,43528205,43527731,43526747,43525921,43525214,43524968,43524635,43524005 Gene ID= ENSG00000124571.17 TPM= 28.98 Transcript Type= protein_coding chr6 43576144 43612057 43576144 43612057 + transcript2174.chr6.nnic@POLH transcript2174.chr6.nnic protein_coding 43576144,43582316,43583007,43587272,43597696,43600988,43603892,43604615,43605254,43610554,43611761 43576440,43582456,43583141,43587489,43597865,43601091,43604011,43604738,43605319,43610723,43612057 Gene ID= ENSG00000170734.11 TPM= 1.81 Transcript Type= NA chr6 43620490 43629162 43620490 43629162 - ENST00000307126.9@GTPBP2 ENST00000307126.9 protein_coding 43628977,43626922,43626226,43625756,43625363,43624888,43624510,43623933,43623737,43622633,43622003,43620490 43629162,43626948,43626410,43625864,43625560,43625062,43624729,43624068,43623795,43622804,43622167,43621790 Gene ID= ENSG00000172432.18 TPM= 13.58 Transcript Type= protein_coding chr6 43629464 43640950 43629464 43640950 + transcript2184.chr6.nnic@MAD2L1BP transcript2184.chr6.nnic protein_coding 43629464,43633194,43635487,43636381,43640021 43629769,43633315,43635567,43636646,43640950 Gene ID= ENSG00000124688.13 TPM= 2.72 Transcript Type= NA chr6 43635819 43640952 43635819 43640952 + ENST00000372171.4@MAD2L1BP ENST00000372171.4 protein_coding 43635819,43636381,43640021 43635921,43636646,43640952 Gene ID= ENSG00000124688.13 TPM= 28.07 Transcript Type= protein_coding chr6 43671310 43687817 43671310 43687817 - transcript2189.chr6.nnic@MRPS18A transcript2189.chr6.nnic protein_coding 43687668,43681089,43675494,43675202,43671310 43687817,43681120,43675617,43675271,43671906 Gene ID= ENSG00000096080.11 TPM= 1.81 Transcript Type= NA chr6 43671303 43687791 43671303 43687791 - ENST00000372133.7@MRPS18A ENST00000372133.7 protein_coding 43687668,43681089,43678518,43675494,43675202,43671303 43687791,43681120,43678625,43675617,43675271,43671906 Gene ID= ENSG00000096080.11 TPM= 76.97 Transcript Type= protein_coding chr6 43770184 43786486 43770184 43786486 + transcript2204.chr6.nic@VEGFA transcript2204.chr6.nic protein_coding 43770184,43774341,43777469,43778889,43781956,43784541 43771312,43774392,43778536,43778918,43782087,43786486 Gene ID= ENSG00000112715.21 TPM= 4.53 Transcript Type= NA chr6 43770184 43786485 43770184 43786485 + transcript2207.chr6.nic@VEGFA transcript2207.chr6.nic protein_coding 43770184,43774341,43777469,43778889,43784541 43771312,43774392,43778536,43778918,43786485 Gene ID= ENSG00000112715.21 TPM= 8.6 Transcript Type= NA chr6 43770184 43778764 43770184 43778764 + ENST00000476772.5@VEGFA ENST00000476772.5 protein_coding 43770184,43774341,43777469,43778460 43771312,43774392,43777665,43778764 Gene ID= ENSG00000112715.21 TPM= 5.43 Transcript Type= retained_intron chr6 44113454 44127457 44113454 44127457 - ENST00000372014.4@MRPL14 ENST00000372014.4 protein_coding 44127344,44116541,44113454 44127457,44116629,44114209 Gene ID= ENSG00000180992.6 TPM= 80.59 Transcript Type= protein_coding chr6 44126914 44155519 44126914 44155519 + ENST00000259746.13@TMEM63B ENST00000259746.13 protein_coding 44126914,44134561,44135017,44135328,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692 44127072,44134743,44135096,44135366,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155519 Gene ID= ENSG00000137216.18 TPM= 4.98 Transcript Type= protein_coding chr6 44127543 44155518 44127543 44155518 + transcript2213.chr6.nic@TMEM63B transcript2213.chr6.nic protein_coding 44127543,44134561,44135017,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692 44127678,44134743,44135096,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155518 Gene ID= ENSG00000137216.18 TPM= 6.34 Transcript Type= NA chr6 44127639 44155518 44127639 44155518 + ENST00000323267.10@TMEM63B ENST00000323267.10 protein_coding 44127639,44134561,44135017,44135328,44136349,44138480,44139467,44139708,44140252,44141028,44146847,44147377,44148252,44148513,44148792,44149859,44150224,44150564,44151846,44152593,44153676,44154073,44154365,44154692 44127678,44134743,44135096,44135366,44136439,44138517,44139609,44139759,44140360,44141098,44146927,44147500,44148385,44148650,44148945,44149965,44150310,44150629,44152008,44152698,44153843,44154188,44154445,44155518 Gene ID= ENSG00000137216.18 TPM= 12.22 Transcript Type= protein_coding chr6 44226751 44235979 44226751 44235979 + transcript2242.chr6.nnic@SLC29A1 transcript2242.chr6.nnic protein_coding 44226751,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417 44227039,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44235979 Gene ID= ENSG00000112759.16 TPM= 64.43 Transcript Type= NA chr6 44219656 44234150 44219656 44234150 + ENST00000427851.6@SLC29A1 ENST00000427851.6 protein_coding 44219656,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417 44219782,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234150 Gene ID= ENSG00000112759.16 TPM= 9.92 Transcript Type= protein_coding chr6 44223823 44234141 44223823 44234141 + ENST00000371724.5@SLC29A1 ENST00000371724.5 protein_coding 44223823,44226061,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417 44223955,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141 Gene ID= ENSG00000112759.16 TPM= 6.59 Transcript Type= protein_coding chr6 44223565 44234141 44223565 44234141 + ENST00000371755.7@SLC29A1 ENST00000371755.7 protein_coding 44223565,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417 44223641,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141 Gene ID= ENSG00000112759.16 TPM= 60.02 Transcript Type= protein_coding chr6 44223565 44234141 44223565 44234141 + ENST00000371740.9@SLC29A1 ENST00000371740.9 protein_coding 44223565,44226061,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417 44223641,44226167,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141 Gene ID= ENSG00000112759.16 TPM= 31.95 Transcript Type= protein_coding chr6 44223823 44234141 44223823 44234141 + ENST00000371713.5@SLC29A1 ENST00000371713.5 protein_coding 44223823,44227263,44229390,44229589,44229907,44230347,44230568,44230811,44231364,44231998,44232343,44232807,44233417 44223955,44227342,44229471,44229791,44230046,44230481,44230665,44230889,44231461,44232106,44232428,44233006,44234141 Gene ID= ENSG00000112759.16 TPM= 4.78 Transcript Type= protein_coding chr6 44246166 44253888 44246166 44253888 + ENST00000620073.4@HSP90AB1 ENST00000620073.4 protein_coding 44246166,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489 44246344,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253888 Gene ID= ENSG00000096384.19 TPM= 23.82 Transcript Type= protein_coding chr6 44247866 44253883 44247866 44253883 + ENST00000371554.2@HSP90AB1 ENST00000371554.2 protein_coding 44247866,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489 44248079,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253883 Gene ID= ENSG00000096384.19 TPM= 32.87 Transcript Type= protein_coding chr6 44247087 44253886 44247087 44253886 + ENST00000371646.9@HSP90AB1 ENST00000371646.9 protein_coding 44247087,44248630,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489 44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253886 Gene ID= ENSG00000096384.19 TPM= 2810.18 Transcript Type= protein_coding chr6 44247087 44253883 44247087 44253883 + ENST00000353801.7@HSP90AB1 ENST00000353801.7 protein_coding 44247087,44248617,44249377,44249675,44250021,44250291,44251048,44251418,44251737,44251999,44253045,44253489 44247195,44248776,44249583,44249834,44250154,44250599,44251213,44251608,44251884,44252267,44253378,44253883 Gene ID= ENSG00000096384.19 TPM= 35.59 Transcript Type= protein_coding chr6 44254106 44257554 44254106 44257554 - ENST00000393812.3@SLC35B2 ENST00000393812.3 protein_coding 44257400,44256685,44256342,44254106 44257554,44256878,44256496,44255644 Gene ID= ENSG00000157593.18 TPM= 240.8 Transcript Type= protein_coding chr6 44254102 44257352 44254102 44257352 - ENST00000619636.4@SLC35B2 ENST00000619636.4 protein_coding 44257182,44256685,44256342,44254102 44257352,44256878,44256496,44255644 Gene ID= ENSG00000157593.18 TPM= 8.98 Transcript Type= protein_coding chr6 44254096 44257554 44254096 44257554 - ENST00000495706.1@SLC35B2 ENST00000495706.1 protein_coding 44257400,44256342,44254096 44257554,44256496,44255644 Gene ID= ENSG00000157593.18 TPM= 5.66 Transcript Type= processed_transcript chr6 44258166 44265788 44258166 44265788 - ENST00000275015.9@NFKBIE ENST00000275015.9 protein_coding 44264982,44262560,44261626,44260451,44260043,44258166 44265788,44262662,44261848,44260539,44260282,44259284 Gene ID= ENSG00000146232.15 TPM= 15.39 Transcript Type= protein_coding chr6 44299654 44313326 44299654 44313326 - ENST00000244571.4@AARS2 ENST00000244571.4 protein_coding 44313081,44312072,44311390,44310994,44310299,44307249,44306923,44306494,44306280,44305653,44305054,44304645,44304420,44304181,44303286,44303066,44302802,44302391,44302060,44301381,44301156,44299654 44313326,44312263,44311535,44311161,44310443,44307394,44307031,44306532,44306391,44305786,44305198,44304817,44304533,44304321,44303423,44303175,44302910,44302513,44302170,44301464,44301266,44300711 Gene ID= ENSG00000124608.4 TPM= 19.92 Transcript Type= protein_coding chr6 44828732 45377933 44828732 45377933 - ENST00000371460.5@SUPT3H ENST00000371460.5 protein_coding 45377768,45365201,45322879,45321796,45105922,45020546,45014801,45003653,44961753,44954495,44953310,44932653,44828732 45377933,45365301,45322967,45321891,45106006,45020632,45014891,45003792,44961828,44954607,44953417,44932763,44829857 Gene ID= ENSG00000196284.15 TPM= 10.87 Transcript Type= protein_coding chr6 46129993 46146699 46129993 46146699 + ENST00000321037.4@ENPP4 ENST00000321037.4 protein_coding 46129993,46139551,46141052,46143276 46130189,46140409,46141222,46146699 Gene ID= ENSG00000001561.6 TPM= 14.49 Transcript Type= protein_coding chr6 46160401 46171005 46160401 46171005 - transcript2298.chr6.nnic@ENPP5 transcript2298.chr6.nnic protein_coding 46170944,46167434,46165387,46160401 46171005,46168297,46165563,46161753 Gene ID= ENSG00000112796.9 TPM= 1.81 Transcript Type= NA chr6 46159187 46170971 46159187 46170971 - ENST00000371383.6@ENPP5 ENST00000371383.6 protein_coding 46170808,46170053,46167434,46165387,46159187 46170971,46170114,46168297,46165563,46161753 Gene ID= ENSG00000112796.9 TPM= 2.72 Transcript Type= protein_coding chr6 46160415 46170971 46160415 46170971 - ENST00000230565.3@ENPP5 ENST00000230565.3 protein_coding 46170808,46167434,46165387,46160415 46170971,46168297,46165563,46161753 Gene ID= ENSG00000112796.9 TPM= 13.58 Transcript Type= protein_coding chr6 46220736 46325668 46220736 46325668 - ENST00000330430.10@RCAN2 ENST00000330430.10 protein_coding 46325393,46248723,46246748,46220736 46325668,46248896,46246919,46223301 Gene ID= ENSG00000172348.14 TPM= 5.43 Transcript Type= protein_coding chr6 46852512 46955067 46852512 46955067 - transcript2309.chr6.nnic@ADGRF5 transcript2309.chr6.nnic protein_coding 46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46869247,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46854715,46852512 46955067,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869366,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854781,46854071 Gene ID= ENSG00000069122.18 TPM= 6.22 Transcript Type= NA chr6 46852512 46921876 46852512 46921876 - transcript2310.chr6.nnic@ADGRF5 transcript2310.chr6.nnic protein_coding 46921713,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46854715,46852512 46921876,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854781,46854071 Gene ID= ENSG00000069122.18 TPM= 2.6 Transcript Type= NA chr6 46852512 46954971 46852512 46954971 - transcript2311.chr6.nnic@ADGRF5 transcript2311.chr6.nnic protein_coding 46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46854715,46852512 46954971,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854781,46854071 Gene ID= ENSG00000069122.18 TPM= 11.65 Transcript Type= NA chr6 46852522 46954977 46852522 46954977 - transcript2314.chr6.nnic@ADGRF5 transcript2314.chr6.nnic protein_coding 46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46869247,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852522 46954977,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869366,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071 Gene ID= ENSG00000069122.18 TPM= 3.35 Transcript Type= NA chr6 46852599 46954943 46852599 46954943 - ENST00000265417.7@ADGRF5 ENST00000265417.7 protein_coding 46954734,46906661,46900029,46888335,46884095,46883559,46882049,46881455,46879818,46878202,46871843,46868883,46866925,46865042,46862888,46860715,46858129,46856867,46856718,46855974,46852599 46954943,46906786,46900083,46888505,46884271,46883665,46882107,46881597,46880039,46878405,46872013,46869092,46867137,46865197,46863096,46860894,46859523,46856908,46856777,46856058,46854071 Gene ID= ENSG00000069122.18 TPM= 9.69 Transcript Type= protein_coding chr6 47231532 47309905 47231532 47309905 - ENST00000296861.2@TNFRSF21 ENST00000296861.2 protein_coding 47309416,47285944,47283938,47253256,47234670,47231532 47309905,47286595,47284432,47253521,47234898,47232994 Gene ID= ENSG00000146072.6 TPM= 9.96 Transcript Type= protein_coding chr6 49430359 49463279 49430359 49463279 - transcript2330.chr6.nnic@MUT transcript2330.chr6.nnic protein_coding 49463168,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49430359 49463279,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856 Gene ID= ENSG00000146085.7 TPM= 12.68 Transcript Type= NA chr6 49430360 49463191 49430360 49463191 - ENST00000274813.3@MUT ENST00000274813.3 protein_coding 49463103,49459082,49457691,49456080,49453585,49451466,49448816,49447670,49444639,49441840,49440206,49435456,49430360 49463191,49459505,49458058,49456237,49453756,49451714,49448927,49447785,49444754,49441971,49440353,49435623,49431856 Gene ID= ENSG00000146085.7 TPM= 56.14 Transcript Type= protein_coding chr6 49463350 49493119 49463350 49493119 + transcript2335.chr6.nnic@CENPQ transcript2335.chr6.nnic protein_coding 49463350,49470140,49470974,49472063,49472790,49480951,49488352,49488607,49492144 49463453,49470278,49471028,49472183,49472858,49481080,49488471,49488684,49493119 Gene ID= ENSG00000031691.6 TPM= 2.72 Transcript Type= NA chr6 49463378 49493107 49463378 49493107 + ENST00000335783.3@CENPQ ENST00000335783.3 protein_coding 49463378,49470159,49470974,49472063,49472790,49480951,49488352,49488607,49492144 49463453,49470278,49471028,49472183,49472858,49481080,49488471,49488684,49493107 Gene ID= ENSG00000031691.6 TPM= 5.43 Transcript Type= protein_coding chr6 49550731 49560933 49550731 49560933 + transcript2338.chr6.nnic@C6orf141 transcript2338.chr6.nnic protein_coding 49550731,49552465,49554877,49560534 49551675,49552570,49555157,49560933 Gene ID= ENSG00000197261.11 TPM= 1.81 Transcript Type= NA chr6 52264014 52284807 52264014 52284807 - transcript2344.chr6.nnic@MCM3 transcript2344.chr6.nnic protein_coding 52284597,52283294,52282653,52282045,52279361,52278742,52277535,52277067,52276268,52273742,52273230,52272301,52269086,52267865,52266611,52266075,52264014 52284807,52283406,52282861,52282175,52279599,52278850,52277688,52277198,52276476,52273916,52273356,52272451,52269226,52267968,52266708,52266144,52264786 Gene ID= ENSG00000112118.18 TPM= 3.62 Transcript Type= NA chr6 52362128 52407777 52362128 52407777 + ENST00000442253.2@PAQR8 ENST00000442253.2 protein_coding 52362128,52403162 52362249,52407777 Gene ID= ENSG00000170915.8 TPM= 24.45 Transcript Type= protein_coding chr6 52420235 52492420 52420235 52492420 + transcript2350.chr6.nic@EFHC1 transcript2350.chr6.nic protein_coding 52420235,52423946,52429969,52430228,52438304,52452688,52464895,52469333,52479037,52479640,52490140,52492270 52420473,52424167,52430131,52430374,52438591,52454287,52465115,52469473,52479250,52479787,52490350,52492420 Gene ID= ENSG00000096093.15 TPM= 2.72 Transcript Type= NA chr6 52420196 52497190 52420196 52497190 + ENST00000371068.10@EFHC1 ENST00000371068.10 protein_coding 52420196,52423946,52438304,52452688,52454095,52464895,52469333,52479037,52479640,52490140,52492270 52420473,52424167,52438591,52452837,52454287,52465115,52469473,52479250,52479787,52490350,52497190 Gene ID= ENSG00000096093.15 TPM= 7.24 Transcript Type= protein_coding chr6 52577197 52583996 52577197 52583996 + transcript2362.chr6.nic@TRAM2-AS1 transcript2362.chr6.nic lincRNA 52577197,52579375,52582863 52578594,52579609,52583996 Gene ID= ENSG00000225791.6 TPM= 5.43 Transcript Type= NA chr6 52664430 52669154 52664430 52669154 + transcript2364.chr6.nnic@AL109918.1 transcript2364.chr6.nnic transcribed_unprocessed_pseudogene 52664430,52666389,52666749 52665419,52666518,52669154 Gene ID= ENSG00000216775.2 TPM= 19.02 Transcript Type= NA chr6 52671115 52686590 52671115 52686590 + transcript2366.chr6.nnic@TMEM14A transcript2366.chr6.nnic protein_coding 52671115,52674914,52677087,52681813,52684078,52686010 52671245,52675044,52677172,52681914,52684165,52686590 Gene ID= ENSG00000096092.5 TPM= 3.62 Transcript Type= NA chr6 52671109 52686588 52671109 52686588 + ENST00000211314.4@TMEM14A ENST00000211314.4 protein_coding 52671109,52677087,52681813,52684078,52686010 52671245,52677172,52681914,52684165,52686588 Gene ID= ENSG00000096092.5 TPM= 100.52 Transcript Type= protein_coding chr6 52791428 52803816 52791428 52803816 - transcript2377.chr6.nic@GSTA1 transcript2377.chr6.nic protein_coding 52803785,52799181,52797586,52794125,52792856,52791428 52803816,52799297,52797637,52794266,52792987,52791980 Gene ID= ENSG00000243955.5 TPM= 66.56 Transcript Type= NA chr6 52791664 52803910 52791664 52803910 - ENST00000334575.5@GSTA1 ENST00000334575.5 protein_coding 52803785,52799181,52797586,52796182,52794125,52792856,52791664 52803910,52799297,52797637,52796314,52794266,52792987,52791980 Gene ID= ENSG00000243955.5 TPM= 205.11 Transcript Type= protein_coding chr6 52893715 52909721 52893715 52909721 - transcript2385.chr6.nnic@GSTA3 transcript2385.chr6.nnic protein_coding 52909641,52902160,52899934,52897825,52893715 52909721,52902478,52900075,52897956,52896928 Gene ID= ENSG00000174156.14 TPM= 2.04 Transcript Type= NA chr6 52893715 52909721 52893715 52909721 - transcript2386.chr6.nnic@GSTA3 transcript2386.chr6.nnic protein_coding 52909641,52902346,52899934,52897825,52893715 52909721,52902478,52900075,52897956,52896928 Gene ID= ENSG00000174156.14 TPM= 6.86 Transcript Type= NA chr6 52896639 52909685 52896639 52909685 - ENST00000211122.3@GSTA3 ENST00000211122.3 protein_coding 52909641,52905748,52903676,52902346,52899934,52897825,52896639 52909685,52905855,52903727,52902478,52900075,52897956,52896928 Gene ID= ENSG00000174156.14 TPM= 5.96 Transcript Type= protein_coding chr6 52896639 52909666 52896639 52909666 - ENST00000370968.5@GSTA3 ENST00000370968.5 protein_coding 52909641,52903676,52902346,52899934,52897825,52896639 52909666,52903727,52902478,52900075,52897956,52896928 Gene ID= ENSG00000174156.14 TPM= 4.15 Transcript Type= protein_coding chr6 52939727 52947850 52939727 52947850 - transcript2390.chr6.nnic@GSTA9P transcript2390.chr6.nnic transcribed_unprocessed_pseudogene 52947833,52945334,52945007,52939727 52947850,52945465,52945104,52940016 Gene ID= ENSG00000243236.6 TPM= 4.53 Transcript Type= NA chr6 52939726 52945465 52939726 52945465 - ENST00000448991.5@GSTA9P ENST00000448991.5 transcribed_unprocessed_pseudogene 52945334,52945007,52939726 52945465,52945104,52940016 Gene ID= ENSG00000243236.6 TPM= 6.34 Transcript Type= processed_transcript chr6 52977934 52995361 52977934 52995361 - transcript2402.chr6.nnic@GSTA4 transcript2402.chr6.nnic protein_coding 52995249,52994157,52985451,52984464,52982574,52977934 52995361,52994261,52985583,52984605,52982705,52978592 Gene ID= ENSG00000170899.10 TPM= 11.87 Transcript Type= NA chr6 52977934 52995361 52977934 52995361 - transcript2405.chr6.nic@GSTA4 transcript2405.chr6.nic protein_coding 52995249,52994157,52987357,52984464,52982574,52977934 52995361,52994261,52987408,52985583,52982705,52978592 Gene ID= ENSG00000170899.10 TPM= 7.68 Transcript Type= NA chr6 52977953 52995378 52977953 52995378 - ENST00000370963.8@GSTA4 ENST00000370963.8 protein_coding 52995249,52994157,52987357,52985451,52984464,52982574,52977953 52995378,52994261,52987408,52985583,52984605,52982705,52978592 Gene ID= ENSG00000170899.10 TPM= 255.67 Transcript Type= protein_coding chr6 53001279 53061770 53001279 53061770 - ENST00000350082.9@ICK ENST00000350082.9 protein_coding 53061596,53041136,53037939,53032533,53031065,53019227,53018330,53016083,53013662,53012037,53011769,53009439,53006315,53001279 53061770,53041408,53037993,53032654,53031144,53019359,53018501,53016250,53013982,53012227,53011917,53009567,53006437,53005303 Gene ID= ENSG00000112144.15 TPM= 17.21 Transcript Type= protein_coding chr6 53065241 53100869 53065241 53100869 + transcript2430.chr6.nnic@FBXO9 transcript2430.chr6.nnic protein_coding 53065241,53071057,53073481,53076486,53078799,53080968,53082504,53092429,53092734,53093885,53095513,53097722 53065792,53071143,53073643,53076543,53078898,53081098,53082618,53092547,53093561,53093978,53095664,53100869 Gene ID= ENSG00000112146.16 TPM= 43.47 Transcript Type= NA chr6 53267390 53348733 53267390 53348733 - transcript2444.chr6.nnic@ELOVL5 transcript2444.chr6.nnic protein_coding 53348350,53295642,53291776,53276179,53275090,53273220,53270593,53267390 53348733,53295707,53291963,53276256,53275261,53273344,53270727,53269270 Gene ID= ENSG00000012660.13 TPM= 20.53 Transcript Type= NA chr6 53267399 53349007 53267399 53349007 - ENST00000304434.10@ELOVL5 ENST00000304434.10 protein_coding 53348817,53295642,53291776,53276179,53275090,53273220,53270593,53267399 53349007,53295707,53291963,53276256,53275261,53273344,53270727,53269270 Gene ID= ENSG00000012660.13 TPM= 193.49 Transcript Type= protein_coding chr6 53497341 53545129 53497341 53545129 - ENST00000229416.10@GCLC ENST00000229416.10 protein_coding 53544496,53522415,53520778,53516109,53514439,53514204,53509176,53508595,53507480,53506913,53505803,53505392,53500432,53500247,53500045,53497341 53545129,53522527,53520960,53516222,53514497,53514337,53509250,53508711,53507618,53507025,53505895,53505496,53500513,53500350,53500165,53498967 Gene ID= ENSG00000001084.10 TPM= 32.15 Transcript Type= protein_coding chr6 53497344 53545048 53497344 53545048 - transcript2452.chr6.nnic@GCLC transcript2452.chr6.nnic protein_coding 53544496,53522415,53520778,53516109,53514439,53514204,53509176,53508595,53507480,53506913,53505803,53505392,53500432,53500247,53500045,53497344 53545048,53522527,53520960,53516222,53514532,53514337,53509250,53508711,53507618,53507025,53505895,53505496,53500513,53500350,53500165,53498967 Gene ID= ENSG00000001084.10 TPM= 2.26 Transcript Type= NA chr6 53793794 53905333 53793794 53905333 + transcript2456.chr6.nic@LRRC1 transcript2456.chr6.nic protein_coding 53793794,53842110,53878993,53882887,53896498,53896829,53897285,53899747,53902629,53904379 53795415,53842227,53879071,53882976,53896554,53896892,53897359,53899891,53902747,53905333 Gene ID= ENSG00000137269.14 TPM= 3.62 Transcript Type= NA chr6 53794980 53924121 53794980 53924121 + ENST00000370888.5@LRRC1 ENST00000370888.5 protein_coding 53794980,53842110,53878993,53882887,53896498,53896829,53897285,53899747,53902629,53904379,53913854,53919498,53920625,53922635 53795415,53842227,53879071,53882976,53896554,53896892,53897359,53899891,53902747,53904462,53913969,53919670,53920761,53924121 Gene ID= ENSG00000137269.14 TPM= 13.58 Transcript Type= protein_coding chr6 54010966 54266280 54010966 54266280 + transcript2458.chr6.nnic@MLIP transcript2458.chr6.nnic protein_coding 54010966,54121447,54124473,54149056,54160367,54169528,54189870,54202105,54257308,54265950 54011056,54121602,54124865,54149127,54160432,54169572,54189914,54202233,54257361,54266280 Gene ID= ENSG00000146147.14 TPM= 2.26 Transcript Type= NA chr6 54010806 54266280 54010806 54266280 + transcript2459.chr6.nnic@MLIP transcript2459.chr6.nnic protein_coding 54010806,54124473,54149056,54160367,54169528,54189870,54202105,54257308,54265950 54011056,54124865,54149127,54160432,54169572,54189914,54202233,54257361,54266280 Gene ID= ENSG00000146147.14 TPM= 2.26 Transcript Type= NA chr6 56056590 56247746 56056590 56247746 - ENST00000244728.9@COL21A1 ENST00000244728.9 protein_coding 56247387,56182531,56179578,56170960,56170649,56168124,56166906,56164814,56164423,56156887,56141930,56141785,56126096,56125567,56124239,56124062,56101472,56077529,56075479,56074232,56070745,56069046,56067295,56064578,56061649,56060891,56060741,56060018,56059165,56056590 56247746,56182656,56180129,56171128,56170865,56168297,56166983,56164822,56164506,56156949,56141983,56141838,56126149,56125620,56124292,56124115,56101525,56077573,56075532,56074285,56070798,56069117,56067330,56064622,56061681,56061037,56060795,56060218,56059242,56057844 Gene ID= ENSG00000124749.16 TPM= 1.81 Transcript Type= protein_coding chr6 56528958 56542428 56528958 56542428 - transcript2468.chr6.nnic@DST transcript2468.chr6.nnic protein_coding 56540280,56536779,56535122,56532344,56528958 56542428,56536942,56535294,56532510,56530133 Gene ID= ENSG00000151914.19 TPM= 111.38 Transcript Type= NA chr6 57046672 57051231 57046672 57051231 + transcript2473.chr6.nic@KIAA1586 transcript2473.chr6.nic protein_coding 57046672,57047313,57050774 57046776,57047396,57051231 Gene ID= ENSG00000168116.13 TPM= 1.81 Transcript Type= NA chr6 57090010 57170307 57090010 57170307 + ENST00000370706.8@ZNF451 ENST00000370706.8 protein_coding 57090010,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719,57152221,57153861,57161084,57168423 57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57150862,57152351,57154047,57161152,57170307 Gene ID= ENSG00000112200.16 TPM= 22.64 Transcript Type= protein_coding chr6 57090113 57151371 57090113 57151371 + ENST00000444273.6@ZNF451 ENST00000444273.6 protein_coding 57090113,57090811,57099061,57124734,57128729,57133042,57134744,57141302,57141948,57147090,57150719 57090274,57090894,57099141,57124859,57128840,57133192,57134870,57141455,57142095,57148693,57151371 Gene ID= ENSG00000112200.16 TPM= 10.87 Transcript Type= retained_intron chr6 57164887 57172582 57164887 57172582 - transcript2494.chr6.nic@AL136311.1 transcript2494.chr6.nic antisense_RNA 57172074,57171005,57164887 57172582,57171098,57165343 Gene ID= ENSG00000226803.7 TPM= 2.72 Transcript Type= NA chr6 57186992 57222314 57186992 57222314 - ENST00000468148.5@RAB23 ENST00000468148.5 protein_coding 57221726,57210226,57207628,57196450,57194770,57193842,57186992 57222314,57210445,57207713,57196606,57194852,57193934,57190600 Gene ID= ENSG00000112210.11 TPM= 13.58 Transcript Type= protein_coding chr6 57188809 57222313 57188809 57222313 - transcript2489.chr6.nnic@RAB23 transcript2489.chr6.nnic protein_coding 57222023,57210226,57207628,57196450,57194770,57193842,57188809 57222313,57210445,57207713,57196606,57194852,57193934,57190600 Gene ID= ENSG00000112210.11 TPM= 3.62 Transcript Type= NA chr6 57188809 57222283 57188809 57222283 - transcript2491.chr6.nnic@RAB23 transcript2491.chr6.nnic protein_coding 57222195,57210226,57207628,57196450,57194770,57193842,57188809 57222283,57210445,57207713,57196606,57194852,57193934,57190600 Gene ID= ENSG00000112210.11 TPM= 1.81 Transcript Type= NA chr6 57188809 57222282 57188809 57222282 - transcript2493.chr6.nnic@RAB23 transcript2493.chr6.nnic protein_coding 57221726,57196450,57194770,57193842,57188809 57222282,57196606,57194852,57193934,57190600 Gene ID= ENSG00000112210.11 TPM= 1.81 Transcript Type= NA chr6 57317624 57646849 57317624 57646849 + ENST00000615550.4@PRIM2 ENST00000615550.4 protein_coding 57317624,57318437,57320457,57324201,57325925,57379901,57382031,57507387,57532411,57537440,57601093,57606375,57632133,57645928 57317701,57318599,57320560,57324280,57326045,57379996,57382168,57507454,57532483,57537625,57601219,57606457,57632201,57646849 Gene ID= ENSG00000146143.17 TPM= 6.34 Transcript Type= protein_coding chr6 57946074 57961452 57946074 57961452 - transcript2502.chr6.nnic@LINC00680 transcript2502.chr6.nnic transcribed_unprocessed_pseudogene 57961321,57961152,57959028,57949358,57948873,57946074 57961452,57961224,57959111,57950011,57949068,57947177 Gene ID= ENSG00000215190.9 TPM= 3.62 Transcript Type= NA chr6 61783119 62286219 61783119 62286219 - transcript2509.chr6.nnic@KHDRBS2 transcript2509.chr6.nnic protein_coding 62285858,62177185,62047878,61978066,61901244,61894635,61783119 62286219,62177312,62047994,61978212,61901371,61894833,61785147 Gene ID= ENSG00000112232.8 TPM= 1.81 Transcript Type= NA chr6 61679960 62286227 61679960 62286227 - ENST00000281156.4@KHDRBS2 ENST00000281156.4 protein_coding 62285858,62177185,62047878,61978066,61901244,61894635,61732682,61697195,61679960 62286227,62177312,62047994,61978212,61901371,61894833,61732764,61697253,61681060 Gene ID= ENSG00000112232.8 TPM= 4.53 Transcript Type= protein_coding chr6 63572012 63583587 63572012 63583587 + ENST00000370651.5@PTP4A1 ENST00000370651.5 protein_coding 63572012,63576436,63578437,63578898,63579257,63580057 63572719,63576985,63578529,63579028,63579331,63583587 Gene ID= ENSG00000112245.10 TPM= 249.02 Transcript Type= protein_coding chr6 69675807 69796784 69675807 69796784 - transcript2524.chr6.nnic@LMBRD1 transcript2524.chr6.nnic protein_coding 69796414,69790296,69780494,69752259,69749341,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675807 69796784,69790472,69780554,69752356,69749408,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271 Gene ID= ENSG00000168216.10 TPM= 6.64 Transcript Type= NA chr6 69675802 69797111 69675802 69797111 - ENST00000370577.7@LMBRD1 ENST00000370577.7 protein_coding 69796813,69790296,69780494,69752259,69749341,69741789,69737942,69718956,69713645,69701889,69701443,69700765,69699043,69697563,69676450,69675802 69797111,69790472,69780554,69752356,69749408,69741877,69738015,69719081,69713797,69701953,69701545,69700869,69699192,69697641,69676541,69676271 Gene ID= ENSG00000168216.10 TPM= 126.17 Transcript Type= protein_coding chr6 70566905 70590763 70566905 70590763 + transcript2538.chr6.nnic@SDHAF4 transcript2538.chr6.nnic protein_coding 70566905,70579414,70588615,70589377 70567004,70579566,70588880,70590763 Gene ID= ENSG00000154079.5 TPM= 1.81 Transcript Type= NA chr6 70566917 70589569 70566917 70589569 + ENST00000370474.3@SDHAF4 ENST00000370474.3 protein_coding 70566917,70579414,70588615 70567004,70579566,70589569 Gene ID= ENSG00000154079.5 TPM= 7.24 Transcript Type= protein_coding chr6 70667776 70862015 70667776 70862015 + ENST00000370455.7@SMAP1 ENST00000370455.7 protein_coding 70667776,70732378,70754980,70773350,70791689,70798657,70836941,70852540,70856859,70857922,70860200 70668141,70732511,70755065,70773425,70791769,70798737,70837028,70852664,70857030,70858229,70862015 Gene ID= ENSG00000112305.14 TPM= 4.53 Transcript Type= protein_coding chr6 70667776 70861166 70667776 70861166 + ENST00000316999.9@SMAP1 ENST00000316999.9 protein_coding 70667776,70732378,70754980,70773350,70798657,70836941,70852540,70856859,70857922,70860200 70668141,70732511,70755065,70773425,70798737,70837028,70852664,70857030,70858229,70861166 Gene ID= ENSG00000112305.14 TPM= 26.26 Transcript Type= protein_coding chr6 73423709 73452276 73423709 73452276 - ENST00000370315.3@MB21D1 ENST00000370315.3 protein_coding 73451525,73445528,73440209,73428709,73423709 73452276,73445747,73440445,73428811,73425578 Gene ID= ENSG00000164430.15 TPM= 3.62 Transcript Type= protein_coding chr6 73461578 73509236 73461578 73509236 + ENST00000498286.5@MTO1 ENST00000498286.5 protein_coding 73461578,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574 73462071,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73509236 Gene ID= ENSG00000135297.15 TPM= 23.09 Transcript Type= protein_coding chr6 73461737 73501095 73461737 73501095 + transcript2560.chr6.nic@MTO1 transcript2560.chr6.nic protein_coding 73461737,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574 73462071,73466408,73466606,73473654,73479844,73480367,73480805,73482244,73482620,73492352,73497896,73501095 Gene ID= ENSG00000135297.15 TPM= 1.81 Transcript Type= NA chr6 73461745 73501095 73461745 73501095 + transcript2561.chr6.nic@MTO1 transcript2561.chr6.nic protein_coding 73461745,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73497736,73500574 73461794,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73497896,73501095 Gene ID= ENSG00000135297.15 TPM= 2.26 Transcript Type= NA chr6 73461737 73501098 73461737 73501098 + transcript2563.chr6.nic@MTO1 transcript2563.chr6.nic protein_coding 73461737,73466209,73466489,73473365,73479732,73479936,73480675,73482040,73482449,73492234,73500574 73462071,73466408,73466606,73473654,73479844,73480126,73480805,73482244,73482620,73492352,73501098 Gene ID= ENSG00000135297.15 TPM= 2.72 Transcript Type= NA chr6 73515752 73521032 73515752 73521032 - ENST00000615060.4@EEF1A1 ENST00000615060.4 protein_coding 73521000,73519883,73519337,73518932,73518698,73518591,73518568,73518354,73518026,73515752 73521032,73520056,73519516,73519228,73518848,73518610,73518588,73518563,73518264,73517934 Gene ID= ENSG00000156508.17 TPM= 16.03 Transcript Type= protein_coding chr6 73593379 73654155 73593379 73654155 - ENST00000355773.5@SLC17A5 ENST00000355773.5 protein_coding 73653793,73644407,73641691,73638412,73636621,73635382,73621804,73615315,73610400,73600351,73593379 73654155,73644603,73641924,73638499,73636707,73635500,73621962,73615447,73610547,73600441,73595214 Gene ID= ENSG00000119899.12 TPM= 18.11 Transcript Type= protein_coding chr6 73696104 73828313 73696104 73828313 + ENST00000287097.5@CD109 ENST00000287097.5 protein_coding 73696104,73697400,73723251,73730344,73736383,73756643,73758944,73762384,73762741,73763576,73765930,73766759,73766948,73768055,73771429,73780424,73781259,73782614,73783707,73785364,73787234,73788468,73792626,73803220,73806844,73808083,73809984,73810992,73812205,73814981,73818388,73820461,73823458 73696289,73697572,73723279,73730574,73736508,73756682,73759028,73762480,73762882,73763685,73766154,73766860,73767010,73768231,73771581,73780498,73781319,73782755,73783824,73785477,73787452,73788612,73792802,73803301,73807072,73808248,73810174,73811147,73812270,73815123,73818535,73820563,73828313 Gene ID= ENSG00000156535.13 TPM= 1.81 Transcript Type= protein_coding chr6 75176628 75206203 75176628 75206203 - transcript2587.chr6.nic@COL12A1 transcript2587.chr6.nic protein_coding 75205777,75202720,75194831,75192212,75191701,75189552,75189217,75188362,75183854,75183050,75180939,75176628 75206203,75202827,75194947,75192355,75191760,75189815,75189381,75188535,75184144,75183652,75181211,75177935 Gene ID= ENSG00000111799.20 TPM= 1.81 Transcript Type= NA chr6 75237684 75244009 75237684 75244009 - ENST00000370089.6@COX7A2 ENST00000370089.6 protein_coding 75243717,75241176,75240301,75237684 75244009,75241265,75240385,75237988 Gene ID= ENSG00000112695.11 TPM= 193.33 Transcript Type= protein_coding chr6 75237787 75243795 75237787 75243795 - ENST00000509698.5@COX7A2 ENST00000509698.5 protein_coding 75243717,75241176,75240277,75237787 75243795,75241265,75240385,75237988 Gene ID= ENSG00000112695.11 TPM= 1.81 Transcript Type= protein_coding chr6 75237787 75243787 75237787 75243787 - ENST00000459637.2@COX7A2 ENST00000459637.2 protein_coding 75243717,75241123,75240301,75237787 75243787,75241265,75240385,75237988 Gene ID= ENSG00000112695.11 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr6 75252924 75284968 75252924 75284968 - ENST00000230461.10@TMEM30A ENST00000230461.10 protein_coding 75284402,75267641,75265231,75260824,75259347,75258780,75252924 75284968,75267748,75265338,75260911,75259490,75258986,75256295 Gene ID= ENSG00000112697.15 TPM= 182.92 Transcript Type= protein_coding chr6 75291859 75493629 75291859 75493629 - ENST00000393004.6@FILIP1 ENST00000393004.6 protein_coding 75493414,75414697,75362744,75353539,75312397,75308840,75291859 75493629,75414978,75362917,75353717,75315202,75308897,75295950 Gene ID= ENSG00000118407.14 TPM= 1.81 Transcript Type= protein_coding chr6 75601853 75716186 75601853 75716186 + transcript2599.chr6.nic@SENP6 transcript2599.chr6.nic protein_coding 75601853,75621532,75622751,75623900,75633581,75634707,75640684,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385 75602576,75621625,75622858,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75716186 Gene ID= ENSG00000112701.17 TPM= 1.81 Transcript Type= NA chr6 75601853 75716067 75601853 75716067 + transcript2609.chr6.nnic@SENP6 transcript2609.chr6.nnic protein_coding 75601853,75621532,75623900,75633581,75634707,75640684,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677168,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385 75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75716067 Gene ID= ENSG00000112701.17 TPM= 3.92 Transcript Type= NA chr6 75601853 75716850 75601853 75716850 + transcript2611.chr6.nic@SENP6 transcript2611.chr6.nic protein_coding 75601853,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385 75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75716850 Gene ID= ENSG00000112701.17 TPM= 16.6 Transcript Type= NA chr6 75601866 75715906 75601866 75715906 + transcript2619.chr6.nnic@SENP6 transcript2619.chr6.nnic protein_coding 75601866,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75702645,75709527,75711328,75713513,75713675,75715385 75602576,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75703072,75709630,75711416,75713581,75713825,75715906 Gene ID= ENSG00000112701.17 TPM= 2.72 Transcript Type= NA chr6 75602033 75718279 75602033 75718279 + transcript2623.chr6.nnic@SENP6 transcript2623.chr6.nnic protein_coding 75602033,75623900,75633581,75634707,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811,75695804,75697425,75709527,75711328,75713513,75713675,75715385 75602576,75623960,75633726,75634811,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75678927,75695923,75697517,75709630,75711416,75713581,75713825,75718279 Gene ID= ENSG00000112701.17 TPM= 1.81 Transcript Type= NA chr6 75601853 75679858 75601853 75679858 + transcript2628.chr6.nic@SENP6 transcript2628.chr6.nic protein_coding 75601853,75621532,75623900,75633581,75634707,75640687,75647731,75659262,75663221,75666712,75670553,75675435,75675860,75677030,75678583,75678811 75602576,75621625,75623960,75633726,75634811,75640704,75647801,75659407,75663518,75666941,75670720,75675468,75676054,75677256,75678692,75679858 Gene ID= ENSG00000112701.17 TPM= 3.02 Transcript Type= NA chr6 75749192 75919537 75749192 75919537 + ENST00000369981.7@MYO6 ENST00000369981.7 protein_coding 75749192,75817501,75822782,75828540,75830416,75832842,75835901,75840585,75841214,75844897,75848351,75855139,75857097,75858902,75861023,75862596,75866526,75866932,75870647,75873207,75879820,75880043,75881689,75886004,75886844,75890057,75891228,75892530,75894814,75895231,75898373,75907605,75908496,75911672,75914063,75914813 75749423,75817664,75822851,75828613,75830545,75832947,75835956,75840682,75841378,75844977,75848531,75855283,75857254,75858993,75861095,75862723,75866621,75867105,75870685,75873300,75879950,75880120,75881818,75886094,75886994,75890265,75891306,75892693,75894840,75895260,75898411,75907708,75908627,75911698,75914281,75919537 Gene ID= ENSG00000196586.13 TPM= 27.62 Transcript Type= protein_coding chr6 75749194 75916227 75749194 75916227 + transcript2635.chr6.nic@MYO6 transcript2635.chr6.nic protein_coding 75749194,75817501,75822782,75828540,75830416,75832842,75835901,75840585,75841214,75844897,75848351,75855139,75857097,75858902,75861023,75862596,75866526,75866932,75870647,75873207,75879820,75880043,75881689,75886004,75886844,75890057,75891228,75892530,75894814,75895231,75907605,75908496,75911672,75914063,75914813 75749423,75817664,75822851,75828613,75830545,75832947,75835956,75840682,75841378,75844977,75848531,75855283,75857254,75858993,75861095,75862723,75866621,75867105,75870685,75873300,75879950,75880120,75881818,75886094,75886994,75890265,75891306,75892690,75894840,75895260,75907708,75908627,75911698,75914281,75916227 Gene ID= ENSG00000196586.13 TPM= 4.98 Transcript Type= NA chr6 76774983 76775860 76774983 76775860 + ENST00000607287.1@AL590426.2 ENST00000607287.1 lincRNA 76774983,76775168 76775075,76775860 Gene ID= ENSG00000271945.1 TPM= 1.81 Transcript Type= lincRNA chr6 78867472 78903102 78867472 78903102 + ENST00000369940.6@IRAK1BP1 ENST00000369940.6 protein_coding 78867472,78885378,78897829,78898064 78867891,78885443,78897959,78903102 Gene ID= ENSG00000146243.13 TPM= 1.81 Transcript Type= protein_coding chr6 79201246 79234764 79201246 79234764 - transcript2663.chr6.nic@HMGN3 transcript2663.chr6.nic protein_coding 79234546,79214972,79208547,79203580,79201246 79234764,79215022,79208576,79203630,79202389 Gene ID= ENSG00000118418.14 TPM= 54.33 Transcript Type= NA chr6 79201249 79234738 79201249 79234738 - ENST00000620514.1@HMGN3 ENST00000620514.1 protein_coding 79234546,79214972,79208547,79203580,79202276,79202063,79201249 79234738,79215022,79208576,79203630,79202389,79202155,79201726 Gene ID= ENSG00000118418.14 TPM= 21.91 Transcript Type= protein_coding chr6 79201245 79234689 79201245 79234689 - ENST00000275036.11@HMGN3 ENST00000275036.11 protein_coding 79234546,79214972,79208547,79203580,79202317,79201245 79234689,79215022,79208576,79203630,79202389,79201726 Gene ID= ENSG00000118418.14 TPM= 123.34 Transcript Type= protein_coding chr6 79201245 79234689 79201245 79234689 - ENST00000344726.9@HMGN3 ENST00000344726.9 protein_coding 79234546,79214972,79208547,79203580,79202276,79201245 79234689,79215022,79208576,79203630,79202389,79201726 Gene ID= ENSG00000118418.14 TPM= 77.15 Transcript Type= protein_coding chr6 79484991 79537408 79484991 79537408 - ENST00000369846.8@LCA5 ENST00000369846.8 protein_coding 79537165,79518705,79513212,79493613,79492551,79491588,79489084,79484991 79537408,79519085,79513741,79493750,79492647,79491730,79489216,79487866 Gene ID= ENSG00000135338.13 TPM= 4.53 Transcript Type= protein_coding chr6 79631283 79703659 79631283 79703659 + ENST00000369838.5@SH3BGRL2 ENST00000369838.5 protein_coding 79631283,79673614,79696485,79699498 79631506,79673799,79696565,79703659 Gene ID= ENSG00000198478.7 TPM= 12.68 Transcript Type= protein_coding chr6 80106641 80356851 80106641 80356851 + transcript2675.chr6.nnic@BCKDHB transcript2675.chr6.nnic protein_coding 80106641,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80354253 80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80356851 Gene ID= ENSG00000083123.14 TPM= 2.72 Transcript Type= NA chr6 80106647 80346254 80106647 80346254 + ENST00000356489.9@BCKDHB ENST00000356489.9 protein_coding 80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664,80345975 80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80343812,80346254 Gene ID= ENSG00000083123.14 TPM= 13.58 Transcript Type= protein_coding chr6 80106647 80346270 80106647 80346270 + ENST00000320393.8@BCKDHB ENST00000320393.8 protein_coding 80106647,80127547,80129161,80167678,80168875,80171282,80200934,80203102,80273135,80343664 80106889,80127624,80129229,80167811,80169030,80171390,80201031,80203212,80273221,80346270 Gene ID= ENSG00000083123.14 TPM= 20.83 Transcript Type= protein_coding chr6 81745730 81752774 81745730 81752774 - ENST00000369756.3@FAM46A ENST00000369756.3 protein_coding 81752569,81751590,81745730 81752774,81752178,81750471 Gene ID= ENSG00000112773.15 TPM= 9.06 Transcript Type= protein_coding chr6 81745730 81752708 81745730 81752708 - ENST00000320172.10@FAM46A ENST00000320172.10 protein_coding 81752431,81751590,81745730 81752708,81752178,81750471 Gene ID= ENSG00000112773.15 TPM= 26.26 Transcript Type= protein_coding chr6 81745730 81752708 81745730 81752708 - ENST00000369754.7@FAM46A ENST00000369754.7 protein_coding 81752376,81751590,81745730 81752708,81752178,81750471 Gene ID= ENSG00000112773.15 TPM= 6.34 Transcript Type= protein_coding chr6 82170236 82247764 82170236 82247764 - transcript2686.chr6.nnic@IBTK transcript2686.chr6.nnic protein_coding 82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82214227,82212707,82211490,82211367,82210814,82204857,82202528,82201422,82200587,82200141,82196298,82194479,82191787,82191073,82181879,82175904,82173367,82172380,82170236 82247764,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82214829,82212793,82211572,82211404,82210910,82204958,82202645,82201482,82200708,82200253,82196446,82194642,82191879,82191216,82182028,82176026,82173438,82172512,82171556 Gene ID= ENSG00000005700.14 TPM= 4.3 Transcript Type= NA chr6 82169989 82247723 82169989 82247723 - transcript2688.chr6.nnic@IBTK transcript2688.chr6.nnic protein_coding 82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82212707,82211490,82211367,82210814,82204857,82202528,82201422,82200587,82200141,82196298,82194479,82191787,82191073,82181879,82175904,82173367,82172380,82169989 82247723,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82212793,82211572,82211404,82210910,82204958,82202645,82201482,82200708,82200253,82196446,82194642,82191879,82191216,82182028,82176026,82173438,82172512,82171556 Gene ID= ENSG00000005700.14 TPM= 2.49 Transcript Type= NA chr6 82170236 82247721 82170236 82247721 - transcript2689.chr6.nic@IBTK transcript2689.chr6.nic protein_coding 82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82214227,82212707,82211490,82211367,82210814,82204857,82202528,82201422,82200587,82200141,82196298,82194479,82191787,82191073,82181879,82173367,82172380,82170236 82247721,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82214829,82212793,82211572,82211404,82210910,82204958,82202645,82201482,82200708,82200253,82196446,82194595,82191879,82191216,82182028,82173438,82172512,82171556 Gene ID= ENSG00000005700.14 TPM= 2.94 Transcript Type= NA chr6 82170236 82247765 82170236 82247765 - transcript2690.chr6.nic@IBTK transcript2690.chr6.nic protein_coding 82247562,82240166,82234159,82231718,82227192,82225477,82224068,82223440,82220590,82217960,82216076,82214227,82212707,82211490,82211367,82210814,82204857,82202528,82201422,82200587,82200141,82196298,82194479,82191787,82191073,82181879,82173367,82172380,82170236 82247765,82240843,82234255,82231842,82227302,82225647,82224185,82223620,82220713,82218137,82216250,82214829,82212793,82211572,82211404,82210910,82204958,82202645,82201482,82200708,82200253,82196401,82194642,82191879,82191216,82182028,82173438,82172512,82171556 Gene ID= ENSG00000005700.14 TPM= 3.85 Transcript Type= NA chr6 82363784 82366897 82363784 82366897 + transcript2694.chr6.nnic@TPBG transcript2694.chr6.nnic protein_coding 82363784,82364623,82364869 82363908,82364735,82366897 Gene ID= ENSG00000146242.8 TPM= 2.72 Transcript Type= NA chr6 82363206 82367417 82363206 82367417 + ENST00000535040.4@TPBG ENST00000535040.4 protein_coding 82363206,82363646,82364623 82363539,82363908,82367417 Gene ID= ENSG00000146242.8 TPM= 17.21 Transcript Type= protein_coding chr6 82364244 82367417 82364244 82367417 + ENST00000543496.3@TPBG ENST00000543496.3 protein_coding 82364244,82364623 82364329,82367417 Gene ID= ENSG00000146242.8 TPM= 4.53 Transcript Type= protein_coding chr6 82892398 83065841 82892398 83065841 - ENST00000369747.7@UBE3D ENST00000369747.7 protein_coding 83065642,83057826,83054148,83044428,83038416,83023969,83022453,83018973,82957312,82892398 83065841,83058022,83054238,83044659,83038485,83024038,83022561,83019136,82957450,82893042 Gene ID= ENSG00000118420.16 TPM= 9.06 Transcript Type= protein_coding chr6 83164873 83193293 83164873 83193293 - ENST00000513973.5@PGM3 ENST00000513973.5 protein_coding 83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83164873 83193293,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323 Gene ID= ENSG00000013375.15 TPM= 34.64 Transcript Type= protein_coding chr6 83169525 83193281 83169525 83193281 - transcript2706.chr6.nic@PGM3 transcript2706.chr6.nic protein_coding 83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170305,83169525 83193281,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169841 Gene ID= ENSG00000013375.15 TPM= 1.81 Transcript Type= NA chr6 83164873 83193293 83164873 83193293 - ENST00000616566.4@PGM3 ENST00000616566.4 protein_coding 83193179,83188614,83187008,83182845,83181736,83179810,83178673,83175962,83174374,83171937,83170301,83164873 83193293,83188798,83187075,83182978,83181931,83179967,83178756,83176060,83174487,83172059,83170478,83169323 Gene ID= ENSG00000013375.15 TPM= 2.94 Transcript Type= protein_coding chr6 83164876 83193281 83164876 83193281 - transcript2709.chr6.nnic@PGM3 transcript2709.chr6.nnic protein_coding 83193179,83190809,83188614,83187008,83182845,83181736,83179810,83178673,83174374,83171937,83170305,83164876 83193281,83191014,83188798,83187075,83182978,83181931,83179967,83178756,83174487,83172059,83170478,83169323 Gene ID= ENSG00000013375.15 TPM= 2.94 Transcript Type= NA chr6 83164876 83193281 83164876 83193281 - transcript2711.chr6.nnic@PGM3 transcript2711.chr6.nnic protein_coding 83193179,83190809,83188614,83187008,83182845,83181736,83175962,83174374,83171937,83170305,83164876 83193281,83191014,83188798,83187075,83182978,83181931,83176060,83174487,83172059,83170478,83169323 Gene ID= ENSG00000013375.15 TPM= 2.94 Transcript Type= NA chr6 83210393 83431070 83210393 83431070 - transcript2722.chr6.nnic@ME1 transcript2722.chr6.nnic protein_coding 83430877,83398367,83352064,83346173,83315310,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83210393 83431070,83398516,83352139,83346334,83315413,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094 Gene ID= ENSG00000065833.8 TPM= 2.72 Transcript Type= NA chr6 83275485 83431070 83275485 83431070 - transcript2725.chr6.nnic@ME1 transcript2725.chr6.nnic protein_coding 83430877,83407768,83398367,83352064,83346173,83315310,83275485 83431070,83407901,83398516,83352139,83346334,83315413,83276153 Gene ID= ENSG00000065833.8 TPM= 2.72 Transcript Type= NA chr6 83210389 83431071 83210389 83431071 - ENST00000369705.3@ME1 ENST00000369705.3 protein_coding 83430877,83407768,83398367,83352064,83346173,83315310,83253629,83239539,83237717,83228826,83227335,83223760,83216498,83210389 83431071,83407901,83398516,83352139,83346334,83315413,83253738,83239636,83237830,83228931,83227477,83223933,83216596,83212094 Gene ID= ENSG00000065833.8 TPM= 76.97 Transcript Type= protein_coding chr6 83512536 83525700 83512536 83525700 + transcript2727.chr6.nnic@PRSS35 transcript2727.chr6.nnic protein_coding 83512536,83521535,83523422 83512694,83521639,83525700 Gene ID= ENSG00000146250.6 TPM= 4.53 Transcript Type= NA chr6 83512538 83525704 83512538 83525704 + ENST00000369700.3@PRSS35 ENST00000369700.3 protein_coding 83512538,83523422 83512694,83525704 Gene ID= ENSG00000146250.6 TPM= 16.3 Transcript Type= protein_coding chr6 83859646 83960425 83859646 83960425 + transcript2730.chr6.nnic@CYB5R4 transcript2730.chr6.nnic protein_coding 83859646,83864175,83893522,83909009,83914416,83918005,83919397,83921082,83922438,83924470,83926136,83934595,83936224,83940056,83940515,83955298,83959824 83859857,83864328,83893622,83909090,83914448,83918065,83919454,83921175,83922470,83924592,83926331,83934735,83936376,83940206,83940601,83955462,83960425 Gene ID= ENSG00000065615.13 TPM= 3.62 Transcript Type= NA chr6 83859643 83967424 83859643 83967424 + ENST00000369681.9@CYB5R4 ENST00000369681.9 protein_coding 83859643,83864175,83893522,83909009,83914416,83918005,83919397,83921082,83922438,83924470,83934595,83936224,83940056,83940515,83955298,83959824 83859857,83864328,83893622,83909090,83914448,83918065,83919454,83921175,83922470,83924592,83934735,83936376,83940206,83940601,83955462,83967424 Gene ID= ENSG00000065615.13 TPM= 33.51 Transcript Type= protein_coding chr6 85450091 85495778 85450091 85495778 + ENST00000257770.7@NT5E ENST00000257770.7 protein_coding 85450091,85467060,85471237,85485235,85487335,85489494,85490508,85491977,85493841 85450478,85467282,85471425,85485432,85487489,85489599,85490657,85492177,85495778 Gene ID= ENSG00000135318.11 TPM= 3.62 Transcript Type= protein_coding chr6 85450091 85471599 85450091 85471599 + ENST00000369646.7@NT5E ENST00000369646.7 protein_coding 85450091,85467060,85471237 85450478,85467282,85471599 Gene ID= ENSG00000135318.11 TPM= 1.81 Transcript Type= protein_coding chr6 85505499 85593895 85505499 85593895 - transcript2757.chr6.nnic@SNX14 transcript2757.chr6.nnic protein_coding 85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505499 85593895,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005 Gene ID= ENSG00000135317.12 TPM= 3.62 Transcript Type= NA chr6 85505499 85593895 85505499 85593895 - ENST00000314673.7@SNX14 ENST00000314673.7 protein_coding 85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85538838,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505499 85593895,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85538864,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005 Gene ID= ENSG00000135317.12 TPM= 64.29 Transcript Type= protein_coding chr6 85505802 85593850 85505802 85593850 - ENST00000369627.6@SNX14 ENST00000369627.6 protein_coding 85593579,85574258,85572298,85572137,85567534,85565332,85557976,85549723,85548301,85547506,85547317,85547112,85543605,85543182,85541985,85536792,85533599,85530192,85528262,85526126,85518008,85517756,85514506,85514070,85513800,85507968,85507233,85505802 85593850,85574378,85572374,85572215,85567577,85565419,85558060,85549879,85548376,85547550,85547397,85547226,85543760,85543306,85542043,85536924,85533800,85530275,85528362,85526237,85518048,85517875,85514629,85514234,85513895,85508059,85507289,85506005 Gene ID= ENSG00000135317.12 TPM= 8.15 Transcript Type= protein_coding chr6 85611322 85642970 85611322 85642970 - transcript2763.chr6.nnic@SYNCRIP transcript2763.chr6.nnic protein_coding 85642797,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85615019,85611322 85642970,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923 Gene ID= ENSG00000135316.17 TPM= 1.81 Transcript Type= NA chr6 85614108 85643854 85614108 85643854 - transcript2768.chr6.nic@SYNCRIP transcript2768.chr6.nic protein_coding 85643750,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614108 85643854,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347 Gene ID= ENSG00000135316.17 TPM= 4.53 Transcript Type= NA chr6 85608329 85642991 85608329 85642991 - ENST00000355238.10@SYNCRIP ENST00000355238.10 protein_coding 85642797,85641292,85640446,85640221,85637243,85636967,85623977,85622482,85619268,85618818,85614981,85608329 85642991,85641451,85640564,85640328,85637356,85637143,85624112,85622687,85619417,85618939,85615347,85612923 Gene ID= ENSG00000135316.17 TPM= 37.13 Transcript Type= protein_coding chr6 85676990 85678736 85676990 85678736 - ENST00000369605.8@SNHG5 ENST00000369605.8 processed_transcript 85678136,85677954,85677795,85677424,85676990 85678736,85678032,85677875,85677492,85677191 Gene ID= ENSG00000203875.10 TPM= 17.21 Transcript Type= lincRNA chr6 85677084 85678733 85677084 85678733 - ENST00000414002.5@SNHG5 ENST00000414002.5 processed_transcript 85678694,85678136,85677954,85677795,85677424,85677084 85678733,85678188,85678032,85677875,85677492,85677191 Gene ID= ENSG00000203875.10 TPM= 87.84 Transcript Type= lincRNA chr6 87154935 87170511 87154935 87170511 + transcript2784.chr6.nic@ZNF292 transcript2784.chr6.nic protein_coding 87154935,87155563,87169674 87155361,87155759,87170511 Gene ID= ENSG00000188994.12 TPM= 1.81 Transcript Type= NA chr6 87243298 87256621 87243298 87256621 + transcript2785.chr6.nnic@ZNF292 transcript2785.chr6.nnic protein_coding 87243298,87245503,87254648 87243611,87245644,87256621 Gene ID= ENSG00000188994.12 TPM= 1.81 Transcript Type= NA chr6 87472944 87512333 87472944 87512333 + transcript2792.chr6.nnic@SLC35A1 transcript2792.chr6.nnic protein_coding 87472944,87477362,87488058,87500508,87501158,87506382,87508420,87509041,87511399 87473019,87477539,87488102,87500667,87501310,87506448,87508596,87509175,87512333 Gene ID= ENSG00000164414.17 TPM= 1.81 Transcript Type= NA chr6 87472925 87512330 87472925 87512330 + ENST00000369556.7@SLC35A1 ENST00000369556.7 protein_coding 87472925,87477362,87500508,87501158,87506382,87509041,87511399 87473019,87477539,87500667,87501310,87506448,87509175,87512330 Gene ID= ENSG00000164414.17 TPM= 1.36 Transcript Type= protein_coding chr6 87472978 87512333 87472978 87512333 + transcript2798.chr6.nnic@SLC35A1 transcript2798.chr6.nnic protein_coding 87472978,87500508,87501158,87506382,87508420,87509041,87511399 87473019,87500667,87501310,87506448,87508596,87509175,87512333 Gene ID= ENSG00000164414.17 TPM= 2.72 Transcript Type= NA chr6 87472977 87512336 87472977 87512336 + ENST00000369552.8@SLC35A1 ENST00000369552.8 protein_coding 87472977,87477362,87500508,87501158,87506382,87508420,87509041,87511399 87473019,87477539,87500667,87501310,87506448,87508596,87509175,87512336 Gene ID= ENSG00000164414.17 TPM= 71.09 Transcript Type= protein_coding chr6 87513749 87589991 87513749 87589991 - transcript2814.chr6.nnic@RARS2 transcript2814.chr6.nnic protein_coding 87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514428,87513749 87589991,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499,87514308 Gene ID= ENSG00000146282.17 TPM= 5.43 Transcript Type= NA chr6 87513748 87589991 87513748 87589991 - transcript2822.chr6.nnic@RARS2 transcript2822.chr6.nnic protein_coding 87589701,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87513748 87589991,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499 Gene ID= ENSG00000146282.17 TPM= 40.75 Transcript Type= NA chr6 87513940 87589991 87513940 87589991 - transcript2832.chr6.nnic@RARS2 transcript2832.chr6.nnic protein_coding 87589701,87569517,87564130,87562702,87555408,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87513940 87589991,87569590,87564232,87562785,87555505,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499 Gene ID= ENSG00000146282.17 TPM= 7.24 Transcript Type= NA chr6 87514378 87590003 87514378 87590003 - ENST00000369536.9@RARS2 ENST00000369536.9 protein_coding 87589922,87569517,87564130,87562702,87555408,87548591,87545616,87541918,87530784,87529542,87524557,87521464,87520180,87519583,87518824,87518630,87518169,87516806,87514957,87514378 87590003,87569590,87564232,87562785,87555505,87548646,87545699,87541994,87530942,87529648,87524652,87521524,87520256,87519707,87518891,87518739,87518264,87516880,87515020,87514499 Gene ID= ENSG00000146282.17 TPM= 68.82 Transcript Type= protein_coding chr6 87590093 87667453 87590093 87667453 + transcript2843.chr6.nnic@ORC3 transcript2843.chr6.nnic protein_coding 87590093,87594353,87594542,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018 87590192,87594407,87594613,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667453 Gene ID= ENSG00000135336.14 TPM= 4.07 Transcript Type= NA chr6 87590067 87667453 87590067 87667453 + ENST00000546266.5@ORC3 ENST00000546266.5 protein_coding 87590067,87594353,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018 87590192,87594407,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667453 Gene ID= ENSG00000135336.14 TPM= 2.26 Transcript Type= protein_coding chr6 87590121 87667451 87590121 87667451 + ENST00000392844.7@ORC3 ENST00000392844.7 protein_coding 87590121,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656906,87657921,87663003,87664743,87665754,87667018 87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451 Gene ID= ENSG00000135336.14 TPM= 18.56 Transcript Type= protein_coding chr6 87590135 87667451 87590135 87667451 + ENST00000257789.4@ORC3 ENST00000257789.4 protein_coding 87590135,87594353,87601784,87603384,87605917,87607673,87609096,87612089,87616314,87621354,87621950,87634845,87636407,87653116,87656903,87657921,87663003,87664743,87665754,87667018 87590192,87594407,87601881,87603528,87606021,87607824,87609229,87612248,87616427,87621487,87622013,87634961,87636486,87653249,87656982,87658018,87663144,87664859,87665833,87667451 Gene ID= ENSG00000135336.14 TPM= 19.47 Transcript Type= protein_coding chr6 87590130 87595437 87590130 87595437 + ENST00000468486.2@ORC3 ENST00000468486.2 protein_coding 87590130,87594353,87594527,87595172 87590192,87594407,87594613,87595437 Gene ID= ENSG00000135336.14 TPM= 2.72 Transcript Type= retained_intron chr6 89080778 89085160 89080778 89085160 + ENST00000336032.3@PNRC1 ENST00000336032.3 protein_coding 89080778,89083753 89081434,89085160 Gene ID= ENSG00000146278.10 TPM= 410.21 Transcript Type= protein_coding chr6 89146050 89165565 89146050 89165565 + ENST00000275072.4@PM20D2 ENST00000275072.4 protein_coding 89146050,89149265,89153043,89154748,89158325,89161783,89162109 89146609,89149413,89153185,89154902,89158460,89161890,89165565 Gene ID= ENSG00000146281.5 TPM= 2.72 Transcript Type= protein_coding chr6 89326625 89352848 89326625 89352848 - ENST00000435041.2@UBE2J1 ENST00000435041.2 protein_coding 89352539,89343683,89342324,89338459,89338205,89335302,89333086,89326625 89352848,89343756,89342455,89338543,89338310,89335431,89333205,89329957 Gene ID= ENSG00000198833.6 TPM= 43.47 Transcript Type= protein_coding chr6 89433136 89631495 89433136 89631495 + transcript2884.chr6.nic@ANKRD6 transcript2884.chr6.nic protein_coding 89433136,89595916,89603029,89606007,89612272,89613792,89616559,89617954,89621922,89623410,89623872,89624539,89627583,89629112,89630433 89433375,89596014,89603127,89606105,89612370,89613890,89616657,89618031,89622026,89623544,89624057,89624691,89627696,89629238,89631495 Gene ID= ENSG00000135299.16 TPM= 1.81 Transcript Type= NA chr6 89632224 89638753 89632224 89638753 - ENST00000523377.1@LYRM2 ENST00000523377.1 protein_coding 89638672,89637742,89632224 89638753,89637882,89637353 Gene ID= ENSG00000083099.10 TPM= 49.8 Transcript Type= protein_coding chr6 89642499 89819723 89642499 89819723 - ENST00000369393.7@MDN1 ENST00000369393.7 protein_coding 89819506,89803328,89794577,89794100,89793762,89790159,89789780,89787854,89785012,89781399,89780212,89776600,89774621,89772573,89771561,89762319,89761645,89758816,89758255,89756277,89754083,89753512,89751431,89750354,89749543,89749223,89747329,89745492,89745273,89743576,89743150,89740234,89738326,89732557,89730726,89728931,89727833,89725199,89723512,89722955,89719136,89718767,89718366,89716650,89715653,89714543,89713148,89712575,89712036,89710681,89708496,89707361,89706059,89701904,89701558,89700646,89700063,89699601,89698865,89696360,89695605,89694074,89692443,89690673,89689870,89688573,89688078,89687344,89686902,89685827,89684876,89683831,89683132,89680589,89678599,89677570,89676102,89675464,89674104,89673236,89672547,89672200,89670919,89668014,89664487,89662792,89662087,89661431,89658610,89658209,89656700,89655764,89654164,89652992,89652192,89650732,89650024,89648256,89648032,89646540,89645015,89642499 89819723,89803554,89794801,89794207,89793954,89790401,89789911,89787957,89785126,89781592,89780293,89776695,89774733,89772721,89771621,89762530,89761748,89758960,89758351,89756390,89754230,89753622,89751582,89750532,89749751,89749369,89747470,89745626,89745411,89743714,89743280,89740378,89738455,89732775,89730923,89729139,89727955,89725396,89723619,89723143,89719225,89719030,89718627,89716809,89715769,89714751,89713296,89712786,89712256,89710794,89708628,89707476,89706192,89702061,89701678,89700856,89700294,89699727,89699035,89696574,89695992,89694183,89693148,89690834,89690143,89688808,89688173,89687438,89687023,89685973,89684985,89683904,89683330,89680751,89678745,89677696,89676207,89675579,89674589,89673462,89672702,89672363,89671080,89668151,89664628,89662967,89662239,89661578,89658917,89658370,89656801,89655968,89654334,89653155,89652281,89650847,89650198,89648329,89648146,89646603,89645157,89644193 Gene ID= ENSG00000112159.11 TPM= 3.62 Transcript Type= protein_coding chr6 90513574 90587086 90513574 90587086 - transcript2905.chr6.nnic@MAP3K7 transcript2905.chr6.nnic protein_coding 90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90515908,90513574 90587086,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681,90515663 Gene ID= ENSG00000135341.17 TPM= 3.17 Transcript Type= NA chr6 90513574 90587071 90513574 90587071 - transcript2910.chr6.nnic@MAP3K7 transcript2910.chr6.nnic protein_coding 90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90513574 90587071,90571807,90568623,90561667,90560234,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681 Gene ID= ENSG00000135341.17 TPM= 2.26 Transcript Type= NA chr6 90513573 90587045 90513573 90587045 - ENST00000369332.7@MAP3K7 ENST00000369332.7 protein_coding 90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90536337,90523678,90519258,90518447,90513573 90587045,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90536401,90523783,90519319,90518562,90516681 Gene ID= ENSG00000135341.17 TPM= 34.41 Transcript Type= protein_coding chr6 90513573 90587045 90513573 90587045 - ENST00000369329.7@MAP3K7 ENST00000369329.7 protein_coding 90586764,90571697,90568558,90561622,90560076,90556500,90553458,90552049,90550468,90548047,90547258,90544552,90536337,90523678,90519258,90518447,90513573 90587045,90571807,90568623,90561667,90560214,90556624,90553586,90552179,90550549,90548177,90547387,90544632,90536401,90523783,90519319,90518562,90516681 Gene ID= ENSG00000135341.17 TPM= 11.77 Transcript Type= protein_coding chr6 95577543 95609457 95577543 95609457 + ENST00000358812.8@MANEA ENST00000358812.8 protein_coding 95577543,95586402,95596737,95604827,95605748 95577638,95586983,95596846,95604903,95609457 Gene ID= ENSG00000172469.15 TPM= 9.06 Transcript Type= protein_coding chr6 96521808 96555276 96521808 96555276 + ENST00000369278.4@UFL1 ENST00000369278.4 protein_coding 96521808,96523146,96524382,96525297,96526321,96528502,96534263,96536244,96537374,96538631,96540535,96542894,96548164,96549412,96549669,96551433,96551838,96552482,96553285 96521950,96523291,96524410,96525394,96526435,96528632,96534321,96536390,96537549,96538810,96540655,96543016,96548281,96549578,96549799,96551513,96551923,96552662,96555276 Gene ID= ENSG00000014123.9 TPM= 49.8 Transcript Type= protein_coding chr6 96563128 96619621 96563128 96619621 + transcript2917.chr6.nnic@FHL5 transcript2917.chr6.nnic protein_coding 96563128,96601053,96603602,96604750,96605902,96610572,96615609 96563355,96601152,96603772,96604924,96606071,96610758,96619621 Gene ID= ENSG00000112214.10 TPM= 3.62 Transcript Type= NA chr6 96562944 96619621 96562944 96619621 + transcript2918.chr6.nic@FHL5 transcript2918.chr6.nic protein_coding 96562944,96603602,96604750,96605902,96610572,96615609 96563355,96603772,96604924,96606071,96610758,96619621 Gene ID= ENSG00000112214.10 TPM= 9.96 Transcript Type= NA chr6 96889313 96897881 96889313 96897881 - ENST00000316149.7@NDUFAF4 ENST00000316149.7 protein_coding 96897666,96896744,96889313 96897881,96896847,96891391 Gene ID= ENSG00000123545.5 TPM= 18.11 Transcript Type= protein_coding chr6 98873936 98947940 98873936 98947940 - transcript2931.chr6.nic@FBXL4 transcript2931.chr6.nic protein_coding 98947806,98934762,98927705,98926477,98917374,98905426,98899268,98880553,98873936 98947940,98934879,98927822,98927060,98917719,98905670,98899481,98880624,98875727 Gene ID= ENSG00000112234.8 TPM= 1.81 Transcript Type= NA chr6 98874485 98947888 98874485 98947888 - transcript2933.chr6.nic@FBXL4 transcript2933.chr6.nic protein_coding 98947806,98927705,98926477,98917374,98905426,98899268,98880553,98874485 98947888,98927822,98927060,98917719,98905670,98899481,98880624,98875727 Gene ID= ENSG00000112234.8 TPM= 1.81 Transcript Type= NA chr6 99369406 99394206 99369406 99394206 - transcript2936.chr6.nic@COQ3 transcript2936.chr6.nic protein_coding 99394074,99383698,99383008,99380189,99377386,99375940,99371428,99369406 99394206,99383824,99383130,99380341,99377485,99376182,99371587,99369820 Gene ID= ENSG00000132423.11 TPM= 1.81 Transcript Type= NA chr6 99398050 99425315 99398050 99425315 - transcript2940.chr6.nnic@PNISR transcript2940.chr6.nnic protein_coding 99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99400544,99398050 99425315,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630,99400311 Gene ID= ENSG00000132424.14 TPM= 17.66 Transcript Type= NA chr6 99399967 99425311 99399967 99425311 - transcript2943.chr6.nnic@PNISR transcript2943.chr6.nnic protein_coding 99425215,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99400544,99399967 99425311,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630,99400311 Gene ID= ENSG00000132424.14 TPM= 3.17 Transcript Type= NA chr6 99398945 99425315 99398945 99425315 - transcript2949.chr6.nic@PNISR transcript2949.chr6.nic protein_coding 99425215,99416349,99414572,99412551,99410741,99409173,99408081,99406031,99402540,99398945 99425315,99416428,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99401630 Gene ID= ENSG00000132424.14 TPM= 9.96 Transcript Type= NA chr6 99399964 99425331 99399964 99425331 - ENST00000438806.5@PNISR ENST00000438806.5 protein_coding 99425215,99414572,99412551,99410741,99409173,99408081,99406031,99404603,99403829,99402540,99399964 99425331,99414690,99412739,99410964,99409344,99408271,99406168,99404702,99403882,99402710,99401630 Gene ID= ENSG00000132424.14 TPM= 4.53 Transcript Type= protein_coding chr6 99521010 99565817 99521010 99565817 + transcript2970.chr6.nnic@TSTD3 transcript2970.chr6.nnic protein_coding 99521010,99526064,99531363,99531632,99548297,99562921 99521147,99526109,99531536,99531790,99548384,99565817 Gene ID= ENSG00000228439.5 TPM= 1.81 Transcript Type= NA chr6 99521010 99576529 99521010 99576529 + transcript2971.chr6.nnic@TSTD3 transcript2971.chr6.nnic protein_coding 99521010,99526064,99531363,99531632,99575653 99521147,99526109,99531536,99531790,99576529 Gene ID= ENSG00000228439.5 TPM= 1.81 Transcript Type= NA chr6 99542380 99568973 99542380 99568973 - ENST00000520429.5@CCNC ENST00000520429.5 protein_coding 99568496,99562842,99561597,99561367,99558497,99551840,99550993,99550218,99549508,99546395,99545112,99542380 99568973,99562948,99561681,99561436,99558548,99551895,99551028,99550309,99549575,99546474,99545230,99543609 Gene ID= ENSG00000112237.12 TPM= 72.44 Transcript Type= protein_coding chr6 100508218 100618219 100508218 100618219 - transcript2976.chr6.nnic@ASCC3 transcript2976.chr6.nnic protein_coding 100617898,100606951,100606740,100605568,100601810,100589948,100589634,100540163,100517991,100516180,100512709,100509932,100508218 100618219,100607088,100606860,100605700,100601935,100590059,100589768,100540387,100518142,100516327,100512918,100510107,100509533 Gene ID= ENSG00000112249.13 TPM= 10.87 Transcript Type= NA chr6 100856303 100881311 100856303 100881311 - ENST00000369143.2@ASCC3 ENST00000369143.2 protein_coding 100881061,100867908,100864064,100856303 100881311,100868038,100864214,100859202 Gene ID= ENSG00000112249.13 TPM= 1.81 Transcript Type= protein_coding chr6 104728093 104859919 104728093 104859919 - ENST00000262903.8@HACE1 ENST00000262903.8 protein_coding 104859567,104852317,104850907,104849142,104843223,104833042,104811311,104796929,104796655,104795579,104791504,104784985,104784417,104784086,104777206,104777013,104776741,104771925,104771193,104750341,104744512,104744160,104730303,104728093 104859919,104852371,104850996,104849246,104843298,104833173,104811393,104797025,104796756,104795685,104791654,104785319,104784485,104784173,104777317,104777110,104776828,104772074,104771389,104750472,104744610,104744230,104730416,104729764 Gene ID= ENSG00000085382.11 TPM= 13.58 Transcript Type= protein_coding chr6 106184491 106325817 106184491 106325817 - transcript2993.chr6.nnic@ATG5 transcript2993.chr6.nnic protein_coding 106325526,106316101,106308364,106293028,106279661,106248150,106201972,106184491 106325817,106316266,106308491,106293106,106279823,106248244,106202089,106186462 Gene ID= ENSG00000057663.14 TPM= 2.72 Transcript Type= NA chr6 106184476 106325791 106184476 106325791 - ENST00000369076.7@ATG5 ENST00000369076.7 protein_coding 106325526,106316101,106308364,106293028,106279661,106248150,106201972,106184476 106325791,106316266,106308491,106293106,106279823,106248244,106202089,106186676 Gene ID= ENSG00000057663.14 TPM= 78.78 Transcript Type= protein_coding chr6 106571971 106629487 106571971 106629487 - ENST00000369063.7@RTN4IP1 ENST00000369063.7 protein_coding 106628748,106622818,106621425,106619202,106602874,106592164,106587679,106583328,106571971 106629487,106622969,106621493,106619326,106602922,106592300,106587862,106583420,106572103 Gene ID= ENSG00000130347.12 TPM= 9.06 Transcript Type= protein_coding chr6 106629580 106668410 106629580 106668410 + transcript3001.chr6.nnic@QRSL1 transcript3001.chr6.nnic protein_coding 106629580,106640101,106640823,106642994,106649025,106652209,106652467,106654730,106655615,106662980,106665782 106629705,106640206,106640921,106643090,106649201,106652384,106652582,106654922,106655732,106663185,106668410 Gene ID= ENSG00000130348.11 TPM= 2.26 Transcript Type= NA chr6 106629566 106668410 106629566 106668410 + transcript3003.chr6.nnic@QRSL1 transcript3003.chr6.nnic protein_coding 106629566,106640823,106642994,106649025,106652209,106652467,106654730,106655615,106662980,106665782 106629705,106640921,106643090,106649201,106652384,106652582,106654922,106655732,106663185,106668410 Gene ID= ENSG00000130348.11 TPM= 13.13 Transcript Type= NA chr6 107028292 107051340 107028292 107051340 + transcript3005.chr6.nnic@C6orf203 transcript3005.chr6.nnic protein_coding 107028292,107030025,107039749,107044260,107051057 107028924,107030107,107040230,107044332,107051340 Gene ID= ENSG00000130349.9 TPM= 7.24 Transcript Type= NA chr6 107028213 107051342 107028213 107051342 + ENST00000311381.7@C6orf203 ENST00000311381.7 protein_coding 107028213,107039749,107044260,107051057 107028271,107040230,107044332,107051342 Gene ID= ENSG00000130349.9 TPM= 41.66 Transcript Type= protein_coding chr6 107152557 107459512 107152557 107459512 - transcript3015.chr6.nnic@PDSS2 transcript3015.chr6.nnic protein_coding 107458990,107334198,107274029,107245548,107212109,107193822,107152557 107459512,107334332,107274227,107245619,107212282,107193854,107154777 Gene ID= ENSG00000164494.11 TPM= 1.81 Transcript Type= NA chr6 107152557 107459576 107152557 107459576 - transcript3017.chr6.nnic@PDSS2 transcript3017.chr6.nnic protein_coding 107458990,107334198,107274029,107245548,107193822,107152557 107459576,107334332,107274227,107245619,107193854,107154777 Gene ID= ENSG00000164494.11 TPM= 1.81 Transcript Type= NA chr6 107152557 107459563 107152557 107459563 - ENST00000369037.8@PDSS2 ENST00000369037.8 protein_coding 107458990,107334198,107274029,107245548,107212109,107210439,107193822,107152557 107459563,107334332,107274227,107245619,107212282,107210570,107193854,107154777 Gene ID= ENSG00000164494.11 TPM= 39.84 Transcript Type= protein_coding chr6 107264186 107459564 107264186 107459564 - ENST00000369031.4@PDSS2 ENST00000369031.4 protein_coding 107458990,107334198,107274029,107264186 107459564,107334332,107274227,107264512 Gene ID= ENSG00000164494.11 TPM= 11.77 Transcript Type= protein_coding chr6 107490120 107659469 107490120 107659469 + transcript3023.chr6.nnic@SOBP transcript3023.chr6.nnic protein_coding 107490120,107503657,107506242,107533459,107658207 107490712,107503795,107506427,107533610,107659469 Gene ID= ENSG00000112320.11 TPM= 2.72 Transcript Type= NA chr6 107489958 107660167 107489958 107660167 + ENST00000317357.9@SOBP ENST00000317357.9 protein_coding 107489958,107503657,107506242,107533459,107587080,107633514,107658207 107490712,107503795,107506427,107533610,107587175,107635469,107660167 Gene ID= ENSG00000112320.11 TPM= 5.43 Transcript Type= protein_coding chr6 107870765 107957328 107870765 107957328 - transcript3031.chr6.nic@SEC63 transcript3031.chr6.nic protein_coding 107957222,107929415,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882988,107881149,107876564,107872808,107870765 107957328,107929514,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146,107881250,107876662,107872912,107871847 Gene ID= ENSG00000025796.13 TPM= 4.3 Transcript Type= NA chr6 107870767 107958139 107870767 107958139 - transcript3034.chr6.nnic@SEC63 transcript3034.chr6.nnic protein_coding 107957886,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882988,107881149,107876564,107872808,107870767 107958139,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146,107881250,107876662,107872912,107871847 Gene ID= ENSG00000025796.13 TPM= 4.3 Transcript Type= NA chr6 107867756 107958189 107867756 107958189 - ENST00000369002.8@SEC63 ENST00000369002.8 protein_coding 107957886,107929415,107924818,107921797,107913366,107912716,107911346,107908927,107906683,107906448,107904629,107902844,107901370,107897649,107893838,107893482,107882988,107881149,107876564,107872808,107867756 107958189,107929514,107924932,107921909,107913427,107912774,107911396,107909035,107906777,107906580,107904721,107902998,107901517,107897731,107893897,107893655,107883146,107881250,107876662,107872912,107871847 Gene ID= ENSG00000025796.13 TPM= 161.87 Transcript Type= protein_coding chr6 108041474 108074754 108041474 108074754 - transcript3040.chr6.nnic@OSTM1 transcript3040.chr6.nnic protein_coding 108074250,108064185,108054490,108051031,108049253,108042653,108041474 108074754,108064299,108054587,108051198,108049418,108044840,108042237 Gene ID= ENSG00000081087.14 TPM= 2.26 Transcript Type= NA chr6 108041409 108074737 108041409 108074737 - ENST00000193322.7@OSTM1 ENST00000193322.7 protein_coding 108074250,108064185,108054490,108051031,108049253,108041409 108074737,108064299,108054587,108051198,108049418,108044840 Gene ID= ENSG00000081087.14 TPM= 64.75 Transcript Type= protein_coding chr6 108175682 108188802 108175682 108188802 + transcript3042.chr6.nnic@NR2E1 transcript3042.chr6.nnic protein_coding 108175682,108176503,108178095,108180323,108180807,108181546,108187301 108175898,108176738,108178241,108180419,108180956,108181651,108188802 Gene ID= ENSG00000112333.11 TPM= 1.81 Transcript Type= NA chr6 108176087 108188802 108176087 108188802 + transcript3043.chr6.nnic@NR2E1 transcript3043.chr6.nnic protein_coding 108176087,108176503,108178095,108180323,108180807,108181546,108187301 108176168,108176738,108178241,108180419,108180956,108181651,108188802 Gene ID= ENSG00000112333.11 TPM= 1.81 Transcript Type= NA chr6 108211222 108261260 108211222 108261260 - ENST00000230085.12@SNX3 ENST00000230085.12 protein_coding 108260760,108222950,108214498,108211222 108261260,108223045,108214622,108212254 Gene ID= ENSG00000112335.14 TPM= 410.66 Transcript Type= protein_coding chr6 108211513 108260964 108211513 108260964 - ENST00000426155.6@SNX3 ENST00000426155.6 protein_coding 108260760,108214498,108211513 108260964,108214622,108212254 Gene ID= ENSG00000112335.14 TPM= 1.81 Transcript Type= protein_coding chr6 108294894 108526001 108294894 108526001 + ENST00000368977.8@AFG1L ENST00000368977.8 protein_coding 108294894,108323825,108346988,108355654,108356690,108366233,108401996,108447214,108476865,108477192,108510212,108519697,108522297 108295218,108324048,108347039,108355755,108356820,108366332,108402054,108447296,108476935,108477292,108510352,108519810,108526001 Gene ID= ENSG00000135537.16 TPM= 2.72 Transcript Type= protein_coding chr6 108559721 108665812 108559721 108665812 + transcript3058.chr6.nic@FOXO3 transcript3058.chr6.nic protein_coding 108559721,108561086,108663455 108560015,108561829,108665812 Gene ID= ENSG00000118689.14 TPM= 6.34 Transcript Type= NA chr6 108559835 108684774 108559835 108684774 + ENST00000343882.10@FOXO3 ENST00000343882.10 protein_coding 108559835,108561086,108663455,108679827 108560015,108561829,108664889,108684774 Gene ID= ENSG00000118689.14 TPM= 27.62 Transcript Type= protein_coding chr6 108560866 108684768 108560866 108684768 + ENST00000406360.1@FOXO3 ENST00000406360.1 protein_coding 108560866,108663455,108679827 108561829,108664889,108684768 Gene ID= ENSG00000118689.14 TPM= 24 Transcript Type= protein_coding chr6 108986442 109009555 108986442 109009555 - ENST00000356644.7@SESN1 ENST00000356644.7 protein_coding 109009359,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986442 109009555,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630 Gene ID= ENSG00000080546.13 TPM= 89.65 Transcript Type= protein_coding chr6 108986437 109094819 108986437 109094819 - ENST00000436639.6@SESN1 ENST00000436639.6 protein_coding 109093795,109002278,109001288,109000491,108998513,108994462,108992787,108990645,108988543,108986437 109094819,109002343,109001488,109000673,108998755,108994609,108992899,108990835,108988687,108987630 Gene ID= ENSG00000080546.13 TPM= 9.96 Transcript Type= protein_coding chr6 109095153 109163932 109095153 109163932 + ENST00000517392.5@CEP57L1 ENST00000517392.5 protein_coding 109095153,109145219,109146758,109150118,109153833,109155230,109155791,109159025,109159269,109160572,109162749 109095575,109145381,109146937,109150239,109153949,109155307,109155877,109159102,109159462,109160716,109163932 Gene ID= ENSG00000183137.14 TPM= 1.81 Transcript Type= protein_coding chr6 109366518 109382444 109366518 109382444 - ENST00000310786.8@CD164 ENST00000310786.8 protein_coding 109382204,109379579,109377900,109376074,109370411,109366518 109382444,109379662,109377971,109376112,109370467,109369017 Gene ID= ENSG00000135535.15 TPM= 472.69 Transcript Type= protein_coding chr6 109366518 109382444 109366518 109382444 - ENST00000324953.9@CD164 ENST00000324953.9 protein_coding 109382204,109379579,109377900,109376074,109366518 109382444,109379662,109377971,109376112,109369017 Gene ID= ENSG00000135535.15 TPM= 21.73 Transcript Type= protein_coding chr6 109366518 109382444 109366518 109382444 - ENST00000275080.11@CD164 ENST00000275080.11 protein_coding 109382204,109379579,109377900,109370411,109366518 109382444,109379662,109377971,109370467,109369017 Gene ID= ENSG00000135535.15 TPM= 1.81 Transcript Type= protein_coding chr6 109440686 109443924 109440686 109443924 + transcript3083.chr6.nnic@SMPD2 transcript3083.chr6.nnic protein_coding 109440686,109441357,109441552,109441960,109442210,109442543,109442752,109442977,109443267,109443517 109441171,109441453,109441628,109442067,109442299,109442625,109442884,109443081,109443420,109443924 Gene ID= ENSG00000135587.8 TPM= 2.72 Transcript Type= NA chr6 109440686 109443924 109440686 109443924 + transcript3085.chr6.nic@SMPD2 transcript3085.chr6.nic protein_coding 109440686,109441357,109441552,109441974,109442210,109442543,109442977,109443267,109443517 109441171,109441453,109441628,109442067,109442299,109442884,109443081,109443420,109443924 Gene ID= ENSG00000135587.8 TPM= 2.72 Transcript Type= NA chr6 109440686 109443924 109440686 109443924 + transcript3090.chr6.nic@SMPD2 transcript3090.chr6.nic protein_coding 109440686,109441357,109441552,109442210,109442543,109442977,109443267,109443517 109441171,109441453,109442067,109442299,109442884,109443081,109443420,109443924 Gene ID= ENSG00000135587.8 TPM= 1.81 Transcript Type= NA chr6 109440686 109443924 109440686 109443924 + transcript3091.chr6.nic@SMPD2 transcript3091.chr6.nic protein_coding 109440686,109441357,109441552,109442210,109442977,109443267,109443517 109441171,109441453,109442067,109442884,109443081,109443420,109443924 Gene ID= ENSG00000135587.8 TPM= 1.81 Transcript Type= NA chr6 109440763 109443919 109440763 109443919 + ENST00000258052.7@SMPD2 ENST00000258052.7 protein_coding 109440763,109441357,109441552,109441974,109442210,109442543,109442752,109442977,109443267,109443517 109441171,109441453,109441628,109442067,109442299,109442625,109442884,109443081,109443420,109443919 Gene ID= ENSG00000135587.8 TPM= 10.87 Transcript Type= protein_coding chr6 109444062 109455987 109444062 109455987 - ENST00000358807.7@MICAL1 ENST00000358807.7 protein_coding 109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444062 109455987,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339 Gene ID= ENSG00000135596.17 TPM= 5.43 Transcript Type= protein_coding chr6 109444064 109455757 109444064 109455757 - transcript3095.chr6.nnic@MICAL1 transcript3095.chr6.nnic protein_coding 109455719,109453939,109453638,109453263,109452511,109452246,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444064 109455757,109454239,109453845,109453367,109452615,109452401,109451700,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445952,109445529,109445290,109444995,109444798,109444339 Gene ID= ENSG00000135596.17 TPM= 2.72 Transcript Type= NA chr6 109444064 109455757 109444064 109455757 - transcript3097.chr6.nic@MICAL1 transcript3097.chr6.nic protein_coding 109455719,109453939,109453638,109453263,109452511,109451600,109450300,109449970,109449657,109449400,109448732,109448203,109447875,109447681,109447357,109447073,109446696,109446136,109445771,109445416,109445197,109444896,109444725,109444064 109455757,109454239,109453845,109453367,109452615,109452401,109450557,109450085,109449783,109449481,109448879,109448393,109447963,109447722,109447440,109447229,109446772,109446412,109445862,109445529,109445290,109444995,109444798,109444339 Gene ID= ENSG00000135596.17 TPM= 1.81 Transcript Type= NA chr6 109462594 109483237 109462594 109483237 - ENST00000230122.3@ZBTB24 ENST00000230122.3 protein_coding 109483098,109481075,109476763,109476175,109475399,109467653,109462594 109483237,109482054,109476930,109476258,109475482,109467734,109466574 Gene ID= ENSG00000112365.4 TPM= 8.15 Transcript Type= protein_coding chr6 109691248 109825431 109691248 109825431 + transcript3111.chr6.nnic@FIG4 transcript3111.chr6.nnic protein_coding 109691248,109715078,109716445,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376,109792582,109796765,109825088 109691501,109715176,109716568,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791571,109792664,109796851,109825431 Gene ID= ENSG00000112367.10 TPM= 1.81 Transcript Type= NA chr6 109691312 109825428 109691312 109825428 + ENST00000230124.7@FIG4 ENST00000230124.7 protein_coding 109691312,109715078,109716445,109727109,109732637,109735150,109738325,109741444,109743110,109743675,109760250,109762091,109763937,109765013,109766729,109776922,109784970,109786302,109789594,109791376,109792582,109796765,109825088 109691501,109715176,109716568,109727265,109732687,109735298,109738453,109741544,109743272,109743772,109760383,109762207,109763982,109765161,109766895,109777060,109785028,109786449,109789677,109791571,109792664,109796851,109825428 Gene ID= ENSG00000112367.10 TPM= 41.66 Transcript Type= protein_coding chr6 110099819 110180004 110099819 110180004 - ENST00000359451.6@WASF1 ENST00000359451.6 protein_coding 110179439,110160635,110127469,110113326,110108528,110107077,110105407,110103378,110101588,110099819 110180004,110160732,110127629,110113460,110108681,110107194,110105579,110103557,110102216,110100679 Gene ID= ENSG00000112290.12 TPM= 1.81 Transcript Type= protein_coding chr6 110099819 110179702 110099819 110179702 - ENST00000392587.6@WASF1 ENST00000392587.6 protein_coding 110179439,110127469,110113326,110108528,110107077,110105407,110103378,110101588,110099819 110179702,110127629,110113460,110108681,110107194,110105579,110103557,110102216,110100679 Gene ID= ENSG00000112290.12 TPM= 4.53 Transcript Type= protein_coding chr6 110180427 110232236 110180427 110232236 + transcript3120.chr6.nnic@CDC40 transcript3120.chr6.nnic protein_coding 110180427,110193182,110207506,110209084,110210707,110212133,110213086,110215286,110217702,110219364,110219736,110226167,110228832,110229954 110180633,110193268,110207589,110209223,110210803,110212272,110213160,110215331,110217803,110219479,110219869,110226243,110228976,110232236 Gene ID= ENSG00000168438.14 TPM= 7.24 Transcript Type= NA chr6 110388322 110415575 110388322 110415575 - transcript3124.chr6.nnic@DDO transcript3124.chr6.nnic protein_coding 110415467,110413291,110408334,110404774,110393207,110388322 110415575,110413466,110408442,110404950,110393342,110388832 Gene ID= ENSG00000203797.9 TPM= 1.81 Transcript Type= NA chr6 110390793 110415533 110390793 110415533 - transcript3126.chr6.nnic@DDO transcript3126.chr6.nnic protein_coding 110415467,110408334,110404774,110390793 110415533,110408442,110404950,110393342 Gene ID= ENSG00000203797.9 TPM= 3.47 Transcript Type= NA chr6 110391771 110415562 110391771 110415562 - ENST00000368924.7@DDO ENST00000368924.7 protein_coding 110415467,110413291,110408334,110404774,110391771 110415562,110413466,110408442,110404950,110393342 Gene ID= ENSG00000203797.9 TPM= 8 Transcript Type= protein_coding chr6 110391771 110415562 110391771 110415562 - ENST00000368923.7@DDO ENST00000368923.7 protein_coding 110415467,110413291,110408334,110391771 110415562,110413466,110408442,110393342 Gene ID= ENSG00000203797.9 TPM= 8.45 Transcript Type= protein_coding chr6 110875521 110895710 110875521 110895710 + transcript3130.chr6.nnic@AMD1 transcript3130.chr6.nnic protein_coding 110875521,110879987,110887505,110888857,110890254,110892161,110892299,110892735,110892910,110893476 110875583,110880098,110887591,110888983,110890356,110892203,110892443,110892827,110893065,110895710 Gene ID= ENSG00000123505.15 TPM= 2.72 Transcript Type= NA chr6 110874770 110895713 110874770 110895713 + ENST00000368885.7@AMD1 ENST00000368885.7 protein_coding 110874770,110887505,110888857,110890254,110892161,110892299,110892735,110892910,110893476 110875215,110887591,110888983,110890356,110892203,110892443,110892827,110893065,110895713 Gene ID= ENSG00000123505.15 TPM= 53.43 Transcript Type= protein_coding chr6 110958928 110967890 110958928 110967890 + ENST00000480191.1@GTF3C6 ENST00000480191.1 protein_coding 110958928,110959172,110960414,110960572,110962392,110967510 110959042,110959252,110960477,110960616,110962505,110967890 Gene ID= ENSG00000155115.6 TPM= 1.36 Transcript Type= processed_transcript chr6 110958560 110967890 110958560 110967890 + ENST00000329970.7@GTF3C6 ENST00000329970.7 protein_coding 110958560,110959172,110960414,110960572,110962392,110967510 110958826,110959252,110960477,110960616,110962505,110967890 Gene ID= ENSG00000155115.6 TPM= 109.12 Transcript Type= protein_coding chr6 110982015 111026100 110982015 111026100 + ENST00000441448.6@RPF2 ENST00000441448.6 protein_coding 110982015,110985006,110989028,110991747,110997183,110999711,111008038,111015754,111024183,111025403 110982129,110985138,110989065,110991786,110997264,110999787,111008137,111015856,111024327,111026100 Gene ID= ENSG00000197498.12 TPM= 17.21 Transcript Type= protein_coding chr6 111087578 111223020 111087578 111223020 + ENST00000368851.9@SLC16A10 ENST00000368851.9 protein_coding 111087578,111172695,111177212,111206592,111218814,111222003 111088095,111172839,111177665,111206735,111219042,111223020 Gene ID= ENSG00000112394.16 TPM= 4.53 Transcript Type= protein_coding chr6 111483748 111503601 111483748 111503601 + transcript3153.chr6.nnic@TRAF3IP2-AS1 transcript3153.chr6.nnic antisense_RNA 111483748,111484744,111486300,111503296 111483796,111484861,111486332,111503601 Gene ID= ENSG00000231889.7 TPM= 1.81 Transcript Type= NA chr6 111558940 111606278 111558940 111606278 - ENST00000340026.10@TRAF3IP2 ENST00000340026.10 protein_coding 111605776,111601196,111591258,111580197,111575643,111572895,111567624,111566444,111562965,111558940 111606278,111601306,111592094,111580389,111575821,111572983,111567692,111566560,111563039,111559551 Gene ID= ENSG00000056972.18 TPM= 9.96 Transcript Type= protein_coding chr6 111660332 111873452 111660332 111873452 - ENST00000354650.7@FYN ENST00000354650.7 protein_coding 111872968,111846589,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111660332 111873452,111846629,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947 Gene ID= ENSG00000010810.17 TPM= 10.26 Transcript Type= protein_coding chr6 111660341 111873450 111660341 111873450 - transcript3158.chr6.nic@FYN transcript3158.chr6.nic protein_coding 111872968,111780566,111719805,111714347,111707922,111703999,111702885,111699515,111696277,111694628,111694375,111674499,111660341 111873450,111780635,111720062,111714443,111708020,111704102,111703034,111699670,111696456,111694704,111694528,111674630,111661947 Gene ID= ENSG00000010810.17 TPM= 3.02 Transcript Type= NA chr6 111660341 111873450 111660341 111873450 - transcript3159.chr6.nic@FYN transcript3159.chr6.nic protein_coding 111872968,111780566,111719805,111714347,111707922,111703999,111702885,111700104,111696277,111694628,111694375,111674499,111660341 111873450,111780635,111720062,111714443,111708020,111704102,111703034,111700268,111696456,111694704,111694528,111674630,111661947 Gene ID= ENSG00000010810.17 TPM= 4.83 Transcript Type= NA chr6 112070668 112087527 112070668 112087527 - transcript3164.chr6.nic@TUBE1 transcript3164.chr6.nic protein_coding 112087410,112087233,112086556,112084189,112081092,112075937,112074710,112072758,112071902,112070668 112087527,112087306,112086608,112084246,112081207,112079754,112074850,112072898,112072076,112071570 Gene ID= ENSG00000074935.13 TPM= 4.53 Transcript Type= NA chr6 112070777 112087513 112070777 112087513 - ENST00000368662.9@TUBE1 ENST00000368662.9 protein_coding 112087410,112087233,112086556,112084189,112081092,112079633,112076322,112075937,112074710,112072758,112071902,112070777 112087513,112087306,112086608,112084246,112081207,112079754,112076509,112076112,112074850,112072898,112072076,112071570 Gene ID= ENSG00000074935.13 TPM= 6.34 Transcript Type= protein_coding chr6 113857362 113863471 113857362 113863471 + ENST00000612661.1@MARCKS ENST00000612661.1 protein_coding 113857362,113859683 113857847,113863471 Gene ID= ENSG00000277443.2 TPM= 134.02 Transcript Type= protein_coding chr6 113868016 113873388 113868016 113873388 - transcript3174.chr6.nnic@LINC01268 transcript3174.chr6.nnic lincRNA 113872994,113870669,113870304,113870021,113868016 113873388,113870734,113870343,113870187,113869604 Gene ID= ENSG00000227502.2 TPM= 1.81 Transcript Type= NA chr6 113933028 113971285 113933028 113971285 - ENST00000519065.5@HDAC2 ENST00000519065.5 protein_coding 113970857,113959906,113958649,113956619,113956013,113953277,113949168,113948979,113946008,113945362,113944280,113943351,113941708,113933028 113971285,113960018,113958766,113956693,113956151,113953418,113949260,113949087,113946148,113945470,113944410,113943506,113941765,113941088 Gene ID= ENSG00000196591.11 TPM= 89.65 Transcript Type= protein_coding chr6 116100849 116249497 116100849 116249497 + ENST00000319550.8@NT5DC1 ENST00000319550.8 protein_coding 116100849,116106244,116108364,116110850,116115691,116117861,116221054,116223034,116236966,116238187,116238955,116243909 116101023,116106335,116108435,116110956,116115770,116117945,116221228,116223131,116237084,116238348,116239123,116249497 Gene ID= ENSG00000178425.13 TPM= 91.46 Transcript Type= protein_coding chr6 116280073 116438645 116280073 116438645 + transcript3184.chr6.nnic@DSE transcript3184.chr6.nnic protein_coding 116280073,116367009,116369825,116370870,116399198,116426574,116430954,116433343,116435587 116280260,116367217,116369927,116371121,116399666,116426827,116431193,116433550,116438645 Gene ID= ENSG00000111817.16 TPM= 9.96 Transcript Type= NA chr6 116370947 116438277 116370947 116438277 + ENST00000359564.2@DSE ENST00000359564.2 protein_coding 116370947,116399198,116426574,116430954,116433343,116435587 116371121,116399666,116426827,116431193,116433550,116438277 Gene ID= ENSG00000111817.16 TPM= 16.3 Transcript Type= protein_coding chr6 116461370 116463768 116461370 116463768 + ENST00000368606.7@FAM26F ENST00000368606.7 protein_coding 116461370,116463283 116461429,116463768 Gene ID= ENSG00000188820.12 TPM= 1.81 Transcript Type= protein_coding chr6 116571385 116594409 116571385 116594409 + transcript3197.chr6.nic@RWDD1 transcript3197.chr6.nic protein_coding 116571385,116572858,116574058,116580295,116584727,116588842,116590272,116590888,116592980 116571655,116572985,116574171,116580360,116584857,116588985,116590404,116590950,116594409 Gene ID= ENSG00000111832.12 TPM= 5.43 Transcript Type= NA chr6 116571367 116597675 116571367 116597675 + ENST00000466444.6@RWDD1 ENST00000466444.6 protein_coding 116571367,116580295,116584727,116588842,116590272,116590888,116592980 116571655,116580360,116584857,116588985,116590404,116590950,116597675 Gene ID= ENSG00000111832.12 TPM= 55.24 Transcript Type= protein_coding chr6 116635618 116668765 116635618 116668765 - transcript3209.chr6.nic@ZUFSP transcript3209.chr6.nic protein_coding 116668566,116666634,116660736,116658803,116656684,116652004,116651572,116647459,116645714,116635618 116668765,116666912,116660846,116658924,116656852,116652192,116651737,116647610,116645934,116635879 Gene ID= ENSG00000153975.9 TPM= 1.81 Transcript Type= NA chr6 116635618 116668794 116635618 116668794 - ENST00000368576.7@ZUFSP ENST00000368576.7 protein_coding 116668566,116666634,116660736,116658803,116656684,116652004,116651572,116647459,116645714,116635618 116668794,116667207,116660846,116658924,116656852,116652192,116651737,116647610,116645934,116635879 Gene ID= ENSG00000153975.9 TPM= 7.24 Transcript Type= protein_coding chr6 116681179 116734716 116681179 116734716 + transcript3203.chr6.nnic@KPNA5 transcript3203.chr6.nnic protein_coding 116681179,116689320,116692055,116692293,116698704,116702019,116705072,116715212,116716219,116722126,116724297,116725751,116726495,116729563,116732136 116681338,116689453,116692156,116692392,116698798,116702150,116705160,116715292,116716318,116722289,116724375,116725876,116726622,116729741,116734716 Gene ID= ENSG00000196911.10 TPM= 1.81 Transcript Type= NA chr6 116681211 116741866 116681211 116741866 + ENST00000356348.6@KPNA5 ENST00000356348.6 protein_coding 116681211,116689320,116692055,116692293,116698704,116702019,116705072,116716219,116722126,116724297,116725751,116726495,116729563,116732136,116741506 116681338,116689453,116692156,116692392,116698798,116702150,116705160,116716318,116722289,116724375,116725876,116726622,116729741,116732368,116741866 Gene ID= ENSG00000196911.10 TPM= 1.81 Transcript Type= protein_coding chr6 116752197 116765723 116752197 116765723 - ENST00000368557.5@FAM162B ENST00000368557.5 protein_coding 116765405,116765147,116761977,116752197 116765723,116765255,116762085,116752695 Gene ID= ENSG00000183807.7 TPM= 1.81 Transcript Type= protein_coding chr6 117482664 117549796 117482664 117549796 + transcript3213.chr6.nic@DCBLD1 transcript3213.chr6.nic protein_coding 117482664,117484950,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117547907 117482893,117485040,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117549796 Gene ID= ENSG00000164465.18 TPM= 2.72 Transcript Type= NA chr6 117482662 117549797 117482662 117549797 + ENST00000338728.9@DCBLD1 ENST00000338728.9 protein_coding 117482662,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117547907 117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117549797 Gene ID= ENSG00000164465.18 TPM= 15.39 Transcript Type= protein_coding chr6 117482657 117569858 117482657 117569858 + ENST00000296955.12@DCBLD1 ENST00000296955.12 protein_coding 117482657,117503767,117519816,117521525,117525362,117532260,117537185,117538620,117539255,117540668,117540918,117543124,117544528,117545478,117569620 117482893,117503979,117519950,117521576,117525434,117532393,117537225,117538835,117539379,117540815,117541025,117543211,117544577,117545597,117569858 Gene ID= ENSG00000164465.18 TPM= 1.81 Transcript Type= protein_coding chr6 117560269 117602528 117560269 117602528 - ENST00000052569.10@GOPC ENST00000052569.10 protein_coding 117602004,117578900,117575177,117573467,117570860,117569572,117566854,117560269 117602528,117579064,117575352,117573632,117570955,117569736,117567034,117563384 Gene ID= ENSG00000047932.13 TPM= 28.98 Transcript Type= protein_coding chr6 117675502 117710640 117675502 117710640 + ENST00000368494.3@NUS1 ENST00000368494.3 protein_coding 117675502,117693042,117694031,117703605,117706925 117676085,117693167,117694180,117703704,117710640 Gene ID= ENSG00000153989.7 TPM= 31.69 Transcript Type= protein_coding chr6 118460772 118651891 118460772 118651891 - ENST00000368491.7@CEP85L ENST00000368491.7 protein_coding 118651197,118632453,118565529,118523802,118511298,118491686,118483706,118481779,118480396,118479871,118470537,118469072,118460772 118651891,118632611,118566316,118523920,118511415,118491865,118483858,118481933,118480513,118479921,118470644,118469303,118465568 Gene ID= ENSG00000111860.13 TPM= 1.81 Transcript Type= protein_coding chr6 118813442 118935162 118813442 118935162 - ENST00000316316.10@MCM9 ENST00000316316.10 protein_coding 118934891,118931420,118923811,118922005,118917561,118913295,118911650,118856371,118829048,118827927,118826782,118826147,118813442 118935162,118931738,118924127,118922086,118917761,118913420,118911769,118856545,118829250,118828130,118826864,118826292,118816294 Gene ID= ENSG00000111877.17 TPM= 1.81 Transcript Type= protein_coding chr6 118894220 118909167 118894220 118909167 + ENST00000229595.5@ASF1A ENST00000229595.5 protein_coding 118894220,118900766,118905652,118907402 118894522,118900881,118905828,118909167 Gene ID= ENSG00000111875.7 TPM= 17.21 Transcript Type= protein_coding chr6 118959829 119078743 118959829 119078743 - ENST00000338891.11@FAM184A ENST00000338891.11 protein_coding 119078141,119023959,119022945,119019978,119016747,119011309,119006447,119003501,119002899,118980138,118979365,118975917,118975024,118974428,118966835,118964667,118961761,118959829 119078743,119024813,119023080,119020159,119016944,119011431,119006608,119003622,119003049,118980350,118979518,118976044,118975208,118974574,118966952,118964771,118961963,118960184 Gene ID= ENSG00000111879.18 TPM= 1.81 Transcript Type= protein_coding chr6 119177205 119350681 119177205 119350681 - transcript3243.chr6.nnic@MAN1A1 transcript3243.chr6.nnic protein_coding 119350527,119349542,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177205 119350681,119349699,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945 Gene ID= ENSG00000111885.6 TPM= 3.62 Transcript Type= NA chr6 119177202 119351048 119177202 119351048 - transcript3247.chr6.nnic@MAN1A1 transcript3247.chr6.nnic protein_coding 119350527,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177202 119351048,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945 Gene ID= ENSG00000111885.6 TPM= 9.96 Transcript Type= NA chr6 119177202 119349811 119177202 119349811 - transcript3248.chr6.nic@MAN1A1 transcript3248.chr6.nic protein_coding 119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177202 119349811,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945 Gene ID= ENSG00000111885.6 TPM= 23.54 Transcript Type= NA chr6 119177209 119349761 119177209 119349761 - ENST00000368468.3@MAN1A1 ENST00000368468.3 protein_coding 119349542,119348463,119306896,119301988,119290683,119248260,119204759,119201254,119193777,119189664,119188405,119180312,119177209 119349761,119349287,119306992,119302103,119290763,119248354,119204882,119201347,119193892,119189883,119188577,119180427,119179945 Gene ID= ENSG00000111885.6 TPM= 142.17 Transcript Type= protein_coding chr6 119349912 119554514 119349912 119554514 + transcript3249.chr6.nnic@NA transcript3249.chr6.nnic NA 119349912,119363255,119533881,119549808,119550230,119551903,119553466 119349974,119363332,119533940,119549893,119550395,119551959,119554514 Gene ID= novel_gene_chr6_3250 TPM= 1.81 Transcript Type= NA chr6 121079495 121334753 121079495 121334753 - transcript3259.chr6.nic@TBC1D32 transcript3259.chr6.nic protein_coding 121334618,121334276,121321633,121317495,121310779,121307976,121304755,121304522,121304365,121303617,121299446,121294570,121292053,121283818,121281544,121279121,121256084,121255328,121242201,121241465,121239070,121223236,121205075,121170405,121160948,121160010,121131627,121126378,121115172,121113062,121112505,121106023,121090853,121079495 121334753,121334431,121321794,121317672,121310847,121308101,121304833,121304625,121304426,121303761,121299505,121294660,121292193,121283910,121281686,121279245,121256285,121255410,121242339,121241552,121239188,121223352,121205163,121170527,121161056,121160103,121131752,121126461,121115241,121113177,121112659,121106163,121091041,121080890 Gene ID= ENSG00000146350.13 TPM= 3.62 Transcript Type= NA chr6 121435692 121449727 121435692 121449727 + ENST00000282561.3@GJA1 ENST00000282561.3 protein_coding 121435692,121446832 121435832,121449727 Gene ID= ENSG00000152661.7 TPM= 278.91 Transcript Type= protein_coding chr6 122443354 122471822 122443354 122471822 - ENST00000339697.4@SERINC1 ENST00000339697.4 protein_coding 122471699,122458520,122456481,122454151,122453770,122451888,122451664,122447121,122446774,122443354 122471822,122458681,122456650,122454230,122453907,122452057,122451754,122447265,122447004,122445179 Gene ID= ENSG00000111897.6 TPM= 222.76 Transcript Type= protein_coding chr6 122789170 122809720 122789170 122809720 + ENST00000368440.4@SMPDL3A ENST00000368440.4 protein_coding 122789170,122795677,122796824,122801310,122803664,122804909,122806233,122809091 122789458,122795890,122796968,122801406,122803833,122805089,122806357,122809720 Gene ID= ENSG00000172594.12 TPM= 33.51 Transcript Type= protein_coding chr6 122789238 122809724 122789238 122809724 + transcript3285.chr6.nnic@SMPDL3A transcript3285.chr6.nnic protein_coding 122789238,122796824,122803664,122804909,122806233,122809091 122789458,122796968,122803833,122805089,122806357,122809724 Gene ID= ENSG00000172594.12 TPM= 10.87 Transcript Type= NA chr6 122789210 122809724 122789210 122809724 + transcript3286.chr6.nnic@SMPDL3A transcript3286.chr6.nnic protein_coding 122789210,122795677,122796824,122804909,122806233,122809091 122789458,122795890,122796968,122805089,122806357,122809724 Gene ID= ENSG00000172594.12 TPM= 1.81 Transcript Type= NA chr6 122789230 122809724 122789230 122809724 + transcript3287.chr6.nnic@SMPDL3A transcript3287.chr6.nnic protein_coding 122789230,122796824,122804909,122806233,122809091 122789458,122796968,122805089,122806357,122809724 Gene ID= ENSG00000172594.12 TPM= 1.81 Transcript Type= NA chr6 122789049 122809717 122789049 122809717 + ENST00000539041.5@SMPDL3A ENST00000539041.5 protein_coding 122789049,122796824,122801310,122803664,122804909,122806233,122809091 122789458,122796968,122801406,122803833,122805089,122806357,122809717 Gene ID= ENSG00000172594.12 TPM= 13.58 Transcript Type= protein_coding chr6 125153656 125264407 125153656 125264407 + ENST00000534000.5@TPD52L1 ENST00000534000.5 protein_coding 125153656,125220078,125229118,125248282,125253717,125257098,125262834 125153970,125220193,125229266,125248383,125253755,125257158,125264407 Gene ID= ENSG00000111907.20 TPM= 215.52 Transcript Type= protein_coding chr6 125182943 125197875 125182943 125197875 + transcript3313.chr6.nnic@TPD52L1 transcript3313.chr6.nnic protein_coding 125182943,125184474,125190609,125197782 125183475,125184571,125190664,125197875 Gene ID= ENSG00000111907.20 TPM= 1.81 Transcript Type= NA chr6 125153733 125263497 125153733 125263497 + ENST00000368402.9@TPD52L1 ENST00000368402.9 protein_coding 125153733,125220078,125229118,125248282,125253717,125262834 125153970,125220193,125229266,125248383,125253755,125263497 Gene ID= ENSG00000111907.20 TPM= 118.33 Transcript Type= protein_coding chr6 125275886 125302042 125275886 125302042 - transcript3316.chr6.nnic@HDDC2 transcript3316.chr6.nnic protein_coding 125301849,125300538,125298714,125292828,125277102,125275886 125302042,125300659,125298816,125292909,125277240,125276243 Gene ID= ENSG00000111906.17 TPM= 2.72 Transcript Type= NA chr6 125275885 125301854 125275885 125301854 - transcript3318.chr6.nnic@HDDC2 transcript3318.chr6.nnic protein_coding 125301598,125300538,125298714,125292841,125277102,125275885 125301854,125300659,125298816,125292909,125277240,125276243 Gene ID= ENSG00000111906.17 TPM= 4.53 Transcript Type= NA chr6 125275886 125302130 125275886 125302130 - transcript3324.chr6.nnic@HDDC2 transcript3324.chr6.nnic protein_coding 125301849,125300538,125292828,125277102,125275886 125302130,125300659,125292909,125277240,125276243 Gene ID= ENSG00000111906.17 TPM= 9.24 Transcript Type= NA chr6 125275886 125302127 125275886 125302127 - transcript3327.chr6.nnic@HDDC2 transcript3327.chr6.nnic protein_coding 125302033,125300538,125292841,125277102,125275886 125302127,125300659,125292909,125277240,125276243 Gene ID= ENSG00000111906.17 TPM= 2.9 Transcript Type= NA chr6 125275886 125301975 125275886 125301975 - ENST00000398153.6@HDDC2 ENST00000398153.6 protein_coding 125301849,125300538,125298714,125292841,125277102,125275886 125301975,125300659,125298816,125292909,125277240,125276243 Gene ID= ENSG00000111906.17 TPM= 42.74 Transcript Type= protein_coding chr6 125790960 125931110 125790960 125931110 + transcript3332.chr6.nic@NCOA7 transcript3332.chr6.nic protein_coding 125790960,125796680,125815291,125855020,125874889,125878263,125881090,125882426,125885159,125888972,125890642,125915333,125920943,125922682,125927663,125928174,125928636 125791067,125796797,125815404,125855240,125874968,125878370,125881203,125882551,125885343,125889981,125890810,125915480,125921068,125922834,125927758,125928247,125931110 Gene ID= ENSG00000111912.19 TPM= 3.62 Transcript Type= NA chr6 125790494 125931110 125790494 125931110 + transcript3334.chr6.nic@NCOA7 transcript3334.chr6.nic protein_coding 125790494,125815291,125855020,125874889,125878263,125881090,125882426,125885159,125888972,125890642,125915333,125920943,125922682,125927663,125928174,125928636 125791067,125815404,125855240,125874968,125878370,125881203,125882551,125885343,125889981,125890810,125915480,125921068,125922834,125927758,125928247,125931110 Gene ID= ENSG00000111912.19 TPM= 10.41 Transcript Type= NA chr6 125790987 125861421 125790987 125861421 + transcript3342.chr6.nnic@NCOA7 transcript3342.chr6.nnic protein_coding 125790987,125815291,125855020,125858822 125791194,125815404,125855240,125861421 Gene ID= ENSG00000111912.19 TPM= 1.81 Transcript Type= NA chr6 125790763 125932030 125790763 125932030 + ENST00000392477.6@NCOA7 ENST00000392477.6 protein_coding 125790763,125815291,125855020,125874889,125878263,125881090,125882426,125885159,125888939,125890642,125915333,125920943,125922682,125927663,125928174,125928636 125791067,125815404,125855240,125874968,125878370,125881203,125882551,125885343,125889981,125890810,125915480,125921068,125922834,125927758,125928247,125932030 Gene ID= ENSG00000111912.19 TPM= 13.13 Transcript Type= protein_coding chr6 125919224 125931111 125919224 125931111 + ENST00000438495.6@NCOA7 ENST00000438495.6 protein_coding 125919224,125920943,125922682,125927663,125928174,125928636 125919431,125921068,125922834,125927758,125928247,125931111 Gene ID= ENSG00000111912.19 TPM= 15.39 Transcript Type= protein_coding chr6 125956770 125980241 125956770 125980241 + transcript3345.chr6.nnic@HINT3 transcript3345.chr6.nnic protein_coding 125956770,125966887,125972259,125974847,125977644 125956888,125967004,125972328,125974973,125980241 Gene ID= ENSG00000111911.6 TPM= 1.81 Transcript Type= NA chr6 125956781 125980244 125956781 125980244 + ENST00000229633.6@HINT3 ENST00000229633.6 protein_coding 125956781,125966887,125972259,125974847,125977644 125957178,125967004,125972328,125974973,125980244 Gene ID= ENSG00000111911.6 TPM= 13.58 Transcript Type= protein_coding chr6 125986458 126039272 125986458 126039272 + transcript3351.chr6.nic@TRMT11 transcript3351.chr6.nic protein_coding 125986458,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126011253,126012771,126012970,126021160,126038705 125986773,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021280,126039272 Gene ID= ENSG00000066651.18 TPM= 2.72 Transcript Type= NA chr6 125986479 126039276 125986479 126039276 + ENST00000368332.7@TRMT11 ENST00000368332.7 protein_coding 125986479,125993757,125995967,125998053,125998223,125998550,125999457,126008392,126011253,126012771,126012970,126021160,126038705 125986622,125993822,125996040,125998134,125998315,125998684,125999613,126008472,126011417,126012852,126013101,126021265,126039276 Gene ID= ENSG00000066651.18 TPM= 25.36 Transcript Type= protein_coding chr6 127118604 127197296 127118604 127197296 + ENST00000356698.8@RSPO3 ENST00000356698.8 protein_coding 127118604,127148648,127150426,127155241,127195823 127119289,127148839,127150572,127155438,127197296 Gene ID= ENSG00000146374.13 TPM= 16.3 Transcript Type= protein_coding chr6 127266856 127288357 127266856 127288357 + transcript3367.chr6.nic@RNF146 transcript3367.chr6.nic protein_coding 127266856,127280231,127282287,127286050,127286616 127266925,127280340,127282395,127286177,127288357 Gene ID= ENSG00000118518.15 TPM= 3.62 Transcript Type= NA chr6 127266883 127288362 127266883 127288362 + ENST00000610153.1@RNF146 ENST00000610153.1 protein_coding 127266883,127280231,127286616 127267095,127280340,127288362 Gene ID= ENSG00000118518.15 TPM= 18.11 Transcript Type= protein_coding chr6 127266883 127288362 127266883 127288362 + ENST00000608991.5@RNF146 ENST00000608991.5 protein_coding 127266883,127280231,127285208,127286050,127286616 127266925,127280340,127285348,127286177,127288362 Gene ID= ENSG00000118518.15 TPM= 1.81 Transcript Type= protein_coding chr6 127288712 127342875 127288712 127342875 - ENST00000531967.5@ECHDC1 ENST00000531967.5 protein_coding 127342356,127330809,127327002,127316450,127314816,127288712 127342875,127331030,127327144,127316502,127314896,127290277 Gene ID= ENSG00000093144.18 TPM= 7.7 Transcript Type= protein_coding chr6 127288710 127343609 127288710 127343609 - ENST00000454859.7@ECHDC1 ENST00000454859.7 protein_coding 127343336,127330809,127327002,127316450,127314816,127288710 127343609,127331030,127327144,127316502,127314896,127290277 Gene ID= ENSG00000093144.18 TPM= 29.43 Transcript Type= protein_coding chr6 127288762 127331030 127288762 127331030 - ENST00000368295.8@ECHDC1 ENST00000368295.8 protein_coding 127330809,127326998,127314816,127288762 127331030,127327144,127314896,127290277 Gene ID= ENSG00000093144.18 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr6 127443705 127516085 127443705 127516085 - transcript3380.chr6.nic@SOGA3 transcript3380.chr6.nic protein_coding 127515514,127514823,127512891,127482913,127475293,127473080,127453847,127449990,127449822,127446408,127443705 127516085,127515047,127513049,127482984,127476468,127473217,127454101,127450352,127449901,127447740,127444282 Gene ID= ENSG00000255330.9 TPM= 2.72 Transcript Type= NA chr6 127968779 128520674 127968779 128520674 - ENST00000368226.8@PTPRK ENST00000368226.8 protein_coding 128520259,128397566,128322039,128242521,128240035,128218922,128184432,128089690,128083715,128082437,128078813,128067519,128064758,128009130,128005084,127998720,127996901,127995462,127992673,127991294,127990769,127985721,127983242,127982831,127981116,127976923,127976657,127973664,127973022,127968779 128520674,128397688,128322310,128242602,128240150,128219096,128184725,128089992,128083824,128082638,128078918,128067792,128064794,128009268,128005244,127998904,127996988,127995538,127992709,127991391,127990885,127985875,127983377,127982980,127981289,127977054,127976782,127973827,127973157,127970280 Gene ID= ENSG00000152894.14 TPM= 9.96 Transcript Type= protein_coding chr6 128321041 128520587 128321041 128520587 - ENST00000525459.1@PTPRK ENST00000525459.1 protein_coding 128520259,128397566,128321041 128520587,128397688,128322310 Gene ID= ENSG00000152894.14 TPM= 1.81 Transcript Type= protein_coding chr6 128883141 129516563 128883141 129516563 + ENST00000618192.4@LAMA2 ENST00000618192.4 protein_coding 128883141,129049918,129059784,129098173,129143901,129146959,129148979,129154505,129165576,129177706,129190205,129192680,129250112,129252084,129260711,129267106,129270624,129280061,129287847,129291614,129297685,129300736,129312861,129314655,129315476,129315762,129316038,129320538,129328278,129342343,129349298,129353164,129366219,129369892,129383122,129391491,129393045,129401224,129402324,129403821,129427752,129438646,129440816,129445664,129452988,129454155,129456335,129460200,129464290,129465145,129473214,129475390,129478693,129481263,129486474,129491901,129492315,129502659,129503091,129505200,129507489,129512363,129514373,129516190 128883357,129050088,129059896,129098415,129144080,129147048,129149096,129154683,129165675,129177866,129190345,129192853,129250213,129252295,129260822,129267219,129270751,129280147,129288058,129291720,129297865,129300872,129313097,129314798,129315655,129315950,129316171,129320655,129328412,129342467,129349384,129353357,129366361,129369990,129383233,129391653,129393255,129401340,129402487,129403959,129427854,129438762,129440998,129445821,129453131,129454288,129456494,129460324,129464452,129465289,129473352,129475401,129478813,129481439,129486622,129492077,129492483,129502771,129503280,129505355,129507642,129512493,129514595,129516563 Gene ID= ENSG00000196569.11 TPM= 4.53 Transcript Type= protein_coding chr6 129576132 129710225 129576132 129710225 - ENST00000368149.2@ARHGAP18 ENST00000368149.2 protein_coding 129710024,129641816,129638394,129634042,129629353,129618687,129616212,129611533,129607893,129605877,129600642,129599216,129583988,129580070,129576132 129710225,129642018,129638629,129634105,129629522,129618852,129616303,129611610,129608052,129605959,129600848,129599356,129584112,129580131,129578604 Gene ID= ENSG00000146376.10 TPM= 92.66 Transcript Type= protein_coding chr6 129577101 129710173 129577101 129710173 - transcript3392.chr6.nnic@ARHGAP18 transcript3392.chr6.nnic protein_coding 129710024,129641816,129638394,129634042,129629353,129618687,129616212,129611533,129607893,129600642,129599216,129583988,129580070,129577101 129710173,129642018,129638629,129634105,129629522,129618852,129616303,129611610,129608052,129600848,129599356,129584112,129580131,129578604 Gene ID= ENSG00000146376.10 TPM= 3.02 Transcript Type= NA chr6 129577101 129710228 129577101 129710228 - transcript3393.chr6.nnic@ARHGAP18 transcript3393.chr6.nnic protein_coding 129710024,129641816,129638394,129634042,129629353,129618687,129616212,129611533,129607893,129605877,129600642,129599216,129580070,129577101 129710228,129642018,129638629,129634105,129629522,129618852,129616303,129611610,129608052,129605959,129600848,129599356,129580131,129578604 Gene ID= ENSG00000146376.10 TPM= 3.02 Transcript Type= NA chr6 130013699 130141449 130013699 130141449 + ENST00000529410.5@L3MBTL3 ENST00000529410.5 protein_coding 130013699,130016226,130018369,130022227,130042685,130049282,130049756,130051249,130052859,130055171,130057406,130060036,130066353,130068330,130070976,130078558,130083620,130086140,130092745,130094265,130104426,130120879,130133452,130133843,130139610 130013720,130016292,130018664,130022305,130042801,130049393,130049830,130051408,130052991,130055255,130057497,130060140,130066488,130068421,130071127,130078634,130083705,130086250,130092859,130094367,130104575,130120958,130133621,130133905,130141449 Gene ID= ENSG00000198945.7 TPM= 4.53 Transcript Type= protein_coding chr6 130018589 130140480 130018589 130140480 + ENST00000533560.5@L3MBTL3 ENST00000533560.5 protein_coding 130018589,130022227,130042685,130049282,130051249,130052859,130055171,130057406,130060036,130066353,130068330,130070976,130078558,130083620,130086140,130092745,130094265,130104426,130120879,130133452,130133843,130139610 130018664,130022305,130042801,130049393,130051408,130052991,130055255,130057497,130060140,130066488,130068421,130071127,130078634,130083705,130086250,130092859,130094367,130104575,130120958,130133621,130133905,130140480 Gene ID= ENSG00000198945.7 TPM= 2.72 Transcript Type= protein_coding chr6 130366017 130443419 130366017 130443419 + transcript3405.chr6.nnic@TMEM200A transcript3405.chr6.nnic protein_coding 130366017,130385173,130439348,130440407 130366524,130385236,130439478,130443419 Gene ID= ENSG00000164484.11 TPM= 19.02 Transcript Type= NA chr6 130366281 130443061 130366281 130443061 + ENST00000617887.4@TMEM200A ENST00000617887.4 protein_coding 130366281,130440407 130366524,130443061 Gene ID= ENSG00000164484.11 TPM= 18.11 Transcript Type= protein_coding chr6 130827406 130837135 130827406 130837135 + ENST00000541421.2@SMLR1 ENST00000541421.2 protein_coding 130827406,130834870 130827651,130837135 Gene ID= ENSG00000256162.2 TPM= 3.62 Transcript Type= protein_coding chr6 130839349 130970526 130839349 130970526 - transcript3417.chr6.nic@EPB41L2 transcript3417.chr6.nic protein_coding 130970283,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839349 130970526,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598 Gene ID= ENSG00000079819.18 TPM= 3.85 Transcript Type= NA chr6 130839353 131063258 130839353 131063258 - ENST00000527411.5@EPB41L2 ENST00000527411.5 protein_coding 131063142,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839353 131063258,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840594 Gene ID= ENSG00000079819.18 TPM= 1.58 Transcript Type= protein_coding chr6 130839347 131063322 130839347 131063322 - ENST00000628542.2@EPB41L2 ENST00000628542.2 protein_coding 131063155,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869563,130867459,130865536,130863638,130858131,130839347 131063322,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598 Gene ID= ENSG00000079819.18 TPM= 14.72 Transcript Type= protein_coding chr6 130839347 131063225 130839347 131063225 - ENST00000530481.5@EPB41L2 ENST00000530481.5 protein_coding 131063142,130955994,130955105,130926605,130908821,130904465,130900962,130899491,130894967,130894344,130890294,130885096,130869812,130867459,130865536,130863638,130858131,130839347 131063225,130956499,130955317,130926709,130908863,130904540,130901180,130899578,130895119,130894441,130890466,130885268,130870126,130867581,130865634,130863718,130858243,130840598 Gene ID= ENSG00000079819.18 TPM= 2.49 Transcript Type= protein_coding chr6 131135295 131283532 131135295 131283532 + transcript3445.chr6.nic@AKAP7 transcript3445.chr6.nic protein_coding 131135295,131145285,131160059,131165081,131169113,131219661,131282399 131135782,131145416,131160198,131165217,131169273,131219808,131283532 Gene ID= ENSG00000118507.15 TPM= 11.38 Transcript Type= NA chr6 131135666 131283535 131135666 131283535 + ENST00000431975.6@AKAP7 ENST00000431975.6 protein_coding 131135666,131145285,131160059,131165081,131169113,131199461,131219661,131281530 131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283535 Gene ID= ENSG00000118507.15 TPM= 13.28 Transcript Type= protein_coding chr6 131135737 131283532 131135737 131283532 + ENST00000541650.5@AKAP7 ENST00000541650.5 protein_coding 131135737,131145288,131160059,131165081,131169113,131199461,131219661,131282399 131135782,131145416,131160198,131165217,131169273,131199573,131219808,131283532 Gene ID= ENSG00000118507.15 TPM= 23.61 Transcript Type= protein_coding chr6 131250159 131283532 131250159 131283532 + ENST00000342266.4@AKAP7 ENST00000342266.4 protein_coding 131250159,131281530 131250616,131283532 Gene ID= ENSG00000118507.15 TPM= 181.17 Transcript Type= protein_coding chr6 131586733 131628239 131586733 131628239 - transcript3462.chr6.nic@MED23 transcript3462.chr6.nic protein_coding 131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131615324,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586733 131628239,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131615341,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846 Gene ID= ENSG00000112282.17 TPM= 9.51 Transcript Type= NA chr6 131573966 131628205 131573966 131628205 - ENST00000354577.8@MED23 ENST00000354577.8 protein_coding 131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131615324,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131587709,131573966 131628205,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131615341,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846,131574295 Gene ID= ENSG00000112282.17 TPM= 1.81 Transcript Type= protein_coding chr6 131586733 131628229 131586733 131628229 - ENST00000368068.7@MED23 ENST00000368068.7 protein_coding 131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131586733 131628229,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846 Gene ID= ENSG00000112282.17 TPM= 14.94 Transcript Type= protein_coding chr6 131586749 131628229 131586749 131628229 - ENST00000368060.7@MED23 ENST00000368060.7 protein_coding 131628011,131627641,131627396,131624865,131623351,131621881,131620628,131619827,131618407,131615907,131610046,131607928,131606479,131605240,131604178,131603030,131602218,131600038,131598556,131598287,131596518,131595947,131594099,131593006,131592388,131591313,131590322,131589465,131587709,131586749 131628229,131627672,131627483,131624989,131623462,131621979,131620729,131619896,131618519,131616002,131610246,131608071,131606624,131605485,131604320,131603204,131602381,131600162,131598761,131598467,131596688,131596163,131594335,131593171,131592460,131591527,131590442,131589596,131587846,131586937 Gene ID= ENSG00000112282.17 TPM= 3.62 Transcript Type= protein_coding chr6 131808016 131895155 131808016 131895155 + ENST00000360971.6@ENPP1 ENST00000360971.6 protein_coding 131808016,131847776,131849990,131851142,131852175,131854926,131858668,131860387,131861595,131864506,131864866,131868018,131869358,131872070,131872923,131874268,131875776,131876992,131878542,131879880,131882345,131883694,131884931,131886562,131890341 131808275,131847848,131850106,131851267,131852235,131855023,131858747,131860506,131861704,131864571,131864938,131868126,131869489,131872101,131873050,131874337,131875863,131877161,131878593,131880034,131882474,131883774,131885063,131886724,131895155 Gene ID= ENSG00000197594.11 TPM= 10.87 Transcript Type= protein_coding chr6 131948176 131951373 131948176 131951373 - ENST00000367976.3@CTGF ENST00000367976.3 protein_coding 131951107,131950770,131950292,131949949,131948176 131951373,131950992,131950543,131950160,131949560 Gene ID= ENSG00000118523.5 TPM= 164.81 Transcript Type= protein_coding chr6 132296055 132401545 132296055 132401545 - ENST00000367963.7@MOXD1 ENST00000367963.7 protein_coding 132401163,132374631,132372830,132372608,132328415,132328013,132323931,132322679,132320629,132315635,132297787,132296055 132401545,132374777,132372997,132372691,132328594,132328115,132324097,132322870,132320688,132315777,132297955,132297317 Gene ID= ENSG00000079931.14 TPM= 111.38 Transcript Type= protein_coding chr6 132390422 132401475 132390422 132401475 - ENST00000392401.3@MOXD1 ENST00000392401.3 protein_coding 132401163,132390422 132401475,132392299 Gene ID= ENSG00000079931.14 TPM= 1.81 Transcript Type= protein_coding chr6 132457880 132513116 132457880 132513116 - transcript3483.chr6.nic@STX7 transcript3483.chr6.nic protein_coding 132513007,132503446,132475593,132471463,132470574,132469951,132468403,132463993,132457880 132513116,132503588,132475662,132472375,132470626,132470047,132468475,132464075,132460850 Gene ID= ENSG00000079950.13 TPM= 7.24 Transcript Type= NA chr6 132769371 132798380 132769371 132798380 - transcript3486.chr6.nnic@SLC18B1 transcript3486.chr6.nnic protein_coding 132798247,132796982,132790177,132789764,132787434,132783933,132779268,132776328,132774222,132772993,132772132,132771036,132770890,132769371 132798380,132797121,132790272,132789837,132787581,132784089,132779404,132776429,132774313,132773088,132772206,132771129,132770939,132770336 Gene ID= ENSG00000146409.10 TPM= 1.81 Transcript Type= NA chr6 132769371 132798657 132769371 132798657 - transcript3490.chr6.nnic@SLC18B1 transcript3490.chr6.nnic protein_coding 132798414,132796982,132790177,132789764,132787434,132783933,132779268,132776328,132774222,132772993,132772015,132771036,132770890,132769371 132798657,132797121,132790272,132789837,132787581,132784089,132779404,132776429,132774313,132773088,132772089,132771129,132770959,132770336 Gene ID= ENSG00000146409.10 TPM= 1.81 Transcript Type= NA chr6 132769370 132798553 132769370 132798553 - ENST00000275227.8@SLC18B1 ENST00000275227.8 protein_coding 132798414,132796982,132790177,132789764,132787434,132783933,132779268,132776328,132774222,132772993,132772132,132771036,132770890,132769370 132798553,132797121,132790272,132789837,132787581,132784089,132779404,132776429,132774313,132773088,132772206,132771129,132770939,132770336 Gene ID= ENSG00000146409.10 TPM= 9.96 Transcript Type= protein_coding chr6 132814441 132817564 132814441 132817564 + ENST00000230050.3@RPS12 ENST00000230050.3 protein_coding 132814441,132814732,132814972,132816461,132816960,132817480 132814613,132814782,132815088,132816563,132817061,132817564 Gene ID= ENSG00000112306.7 TPM= 705.42 Transcript Type= protein_coding chr6 132814569 132817564 132814569 132817564 + ENST00000484616.2@RPS12 ENST00000484616.2 protein_coding 132814569,132814732,132814972,132816461,132816960,132817480 132814613,132814782,132815224,132816563,132817061,132817564 Gene ID= ENSG00000112306.7 TPM= 24 Transcript Type= retained_intron chr6 133952170 133987499 133952170 133987499 + ENST00000613034.4@TBPL1 ENST00000613034.4 protein_coding 133952170,133980082,133982568,133982817,133984376,133984577,133986961 133952730,133980260,133982650,133982880,133984479,133984671,133987499 Gene ID= ENSG00000028839.9 TPM= 1.81 Transcript Type= protein_coding chr6 134169252 134174896 134169252 134174896 - ENST00000237305.11@SGK1 ENST00000237305.11 protein_coding 134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169252 134174896,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435 Gene ID= ENSG00000118515.11 TPM= 274.97 Transcript Type= protein_coding chr6 134169250 134175991 134169250 134175991 - ENST00000413996.7@SGK1 ENST00000413996.7 protein_coding 134175544,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169250 134175991,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435 Gene ID= ENSG00000118515.11 TPM= 45.87 Transcript Type= protein_coding chr6 134169246 134318058 134169246 134318058 - ENST00000367858.9@SGK1 ENST00000367858.9 protein_coding 134317392,134261933,134207356,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134171023,134170826,134169246 134318058,134262148,134207431,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170915,134170435 Gene ID= ENSG00000118515.11 TPM= 14.17 Transcript Type= protein_coding chr6 134169248 134174866 134169248 134174866 - ENST00000474427.6@SGK1 ENST00000474427.6 protein_coding 134174732,134169248 134174866,134174586 Gene ID= ENSG00000118515.11 TPM= 2.72 Transcript Type= retained_intron chr6 134169284 134174842 134169284 134174842 - ENST00000367855.7@SGK1 ENST00000367855.7 protein_coding 134174732,134174511,134174005,134173462,134173274,134173023,134172662,134172193,134171637,134170826,134169284 134174842,134174586,134174080,134173566,134173357,134173154,134172774,134172316,134171732,134171178,134170435 Gene ID= ENSG00000118515.11 TPM= 1.27 Transcript Type= retained_intron chr6 134960378 135054898 134960378 135054898 - ENST00000367837.9@HBS1L ENST00000367837.9 protein_coding 135054649,135050582,135042001,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134960378 135054898,135050647,135042126,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290 Gene ID= ENSG00000112339.14 TPM= 141.27 Transcript Type= protein_coding chr6 134964627 135054856 134964627 135054856 - transcript3532.chr6.nnic@HBS1L transcript3532.chr6.nnic protein_coding 135054649,135050582,135042001,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134966329,134964627 135054856,135050647,135042126,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134966473,134965290 Gene ID= ENSG00000112339.14 TPM= 3.62 Transcript Type= NA chr6 135035857 135054884 135035857 135054884 - ENST00000367822.9@HBS1L ENST00000367822.9 protein_coding 135054649,135050582,135042001,135039573,135035857 135054884,135050647,135042126,135039767,135038026 Gene ID= ENSG00000112339.14 TPM= 1.81 Transcript Type= protein_coding chr6 134964633 135054819 134964633 135054819 - ENST00000367826.6@HBS1L ENST00000367826.6 protein_coding 135054649,135050582,135039573,135002734,134997397,134996777,134993758,134987645,134986736,134986066,134985341,134982458,134979178,134978679,134969238,134966329,134964633 135054819,135050647,135039767,135002842,134997656,134996942,134993875,134987791,134986810,134986183,134985409,134982562,134979268,134978787,134969338,134966473,134965290 Gene ID= ENSG00000112339.14 TPM= 3.62 Transcript Type= protein_coding chr6 135182799 135219171 135182799 135219171 + transcript3542.chr6.nnic@MYB transcript3542.chr6.nnic protein_coding 135182799,135185903,135187834,135189791,135190127,135192324,135193838,135194356,135195748,135198908,135200085,135200290,135201639,135203217,135217864 135183293,135186020,135187905,135189883,135190347,135192558,135193918,135194460,135196002,135199050,135200199,135200415,135201749,135203324,135219171 Gene ID= ENSG00000118513.18 TPM= 1.81 Transcript Type= NA chr6 135181328 135219173 135181328 135219173 + ENST00000367814.8@MYB ENST00000367814.8 protein_coding 135181328,135185903,135187834,135189791,135190127,135192324,135193838,135194356,135195748,135198908,135200085,135200290,135201639,135203217,135217864 135181536,135186020,135187905,135189883,135190347,135192558,135193918,135194460,135196002,135199050,135200199,135200415,135201749,135203324,135219173 Gene ID= ENSG00000118513.18 TPM= 7.24 Transcript Type= protein_coding chr6 135394664 135497743 135394664 135497743 - transcript3545.chr6.nnic@AHI1 transcript3545.chr6.nnic protein_coding 135497583,135497188,135495814,135492228,135490623,135467581,135465814,135463125,135457494,135455734,135453341,135448290,135442582,135438375,135433027,135431208,135429882,135428629,135427167,135411348,135404951,135394664 135497743,135497249,135495898,135492291,135490747,135467634,135466373,135463306,135457713,135455926,135453436,135448475,135442714,135438498,135433256,135431314,135430000,135428759,135427307,135411544,135404977,135394896 Gene ID= ENSG00000135541.20 TPM= 1.81 Transcript Type= NA chr6 135497854 135690835 135497854 135690835 + ENST00000421378.2@LINC00271 ENST00000421378.2 lincRNA 135497854,135642193,135672294,135689623 135498000,135642276,135672429,135690835 Gene ID= ENSG00000231028.8 TPM= 2.72 Transcript Type= lincRNA chr6 135851696 136195574 135851696 136195574 + ENST00000308191.10@PDE7B ENST00000308191.10 protein_coding 135851696,135947464,136108731,136147351,136149087,136151160,136154075,136155627,136173797,136178997,136181227,136187036,136191614 135852019,135947524,136108814,136147502,136149150,136151255,136154175,136155758,136173888,136179141,136181323,136187116,136195574 Gene ID= ENSG00000171408.13 TPM= 3.62 Transcript Type= protein_coding chr6 136231024 136250324 136231024 136250324 - ENST00000451457.6@MTFR2 ENST00000451457.6 protein_coding 136250264,136249037,136244765,136242861,136241444,136239466,136233325,136231024 136250324,136249153,136244869,136242973,136241676,136239820,136233499,136231388 Gene ID= ENSG00000146410.11 TPM= 1.81 Transcript Type= protein_coding chr6 136258591 136289846 136258591 136289846 - transcript3559.chr6.nic@BCLAF1 transcript3559.chr6.nic protein_coding 136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136269141,136268162,136267029,136261265,136258591 136289846,136282687,136279876,136278776,136275989,136275701,136273187,136272079,136269612,136269303,136268339,136267175,136261477,136261115 Gene ID= ENSG00000029363.16 TPM= 2.26 Transcript Type= NA chr6 136256863 136289851 136256863 136289851 - ENST00000531224.5@BCLAF1 ENST00000531224.5 protein_coding 136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136267029,136261265,136256863 136289851,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136268339,136267175,136261477,136261115 Gene ID= ENSG00000029363.16 TPM= 31.24 Transcript Type= protein_coding chr6 136256863 136289851 136256863 136289851 - ENST00000353331.8@BCLAF1 ENST00000353331.8 protein_coding 136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136261265,136256863 136289851,136282687,136279876,136278770,136276508,136275701,136273187,136272079,136269612,136268339,136261477,136261115 Gene ID= ENSG00000029363.16 TPM= 9.96 Transcript Type= protein_coding chr6 136258586 136289829 136258586 136289829 - ENST00000527536.5@BCLAF1 ENST00000527536.5 protein_coding 136289713,136282584,136279763,136277865,136275843,136275532,136273082,136271995,136269437,136268162,136261265,136258586 136289829,136282687,136279876,136278776,136276508,136275701,136273187,136272079,136269612,136268339,136261477,136261115 Gene ID= ENSG00000029363.16 TPM= 7.24 Transcript Type= protein_coding chr6 136557030 136793294 136557030 136793294 - transcript3572.chr6.nnic@MAP3K5 transcript3572.chr6.nnic protein_coding 136792645,136791710,136720450,136705110,136698489,136697219,136695951,136694140,136669283,136659219,136656307,136650984,136642520,136639543,136637325,136622848,136614159,136613120,136611282,136605209,136601802,136601022,136592437,136592173,136583555,136580301,136567631,136562503,136561533,136558800,136557030 136793294,136792388,136720589,136705133,136698682,136697387,136696057,136694310,136669395,136659378,136656460,136651091,136642569,136639638,136637406,136622981,136614286,136613256,136611387,136605366,136601979,136601042,136592614,136592341,136583740,136580406,136567874,136562615,136561645,136558876,136557818 Gene ID= ENSG00000197442.9 TPM= 13.58 Transcript Type= NA chr6 136557030 136792392 136557030 136792392 - transcript3583.chr6.nnic@MAP3K5 transcript3583.chr6.nnic protein_coding 136791710,136705110,136698489,136697219,136695951,136694140,136669283,136659219,136656307,136650984,136642520,136639543,136637325,136622848,136614159,136613120,136611282,136605209,136601802,136601022,136592437,136592173,136583555,136580301,136567631,136562503,136561533,136558800,136557030 136792392,136705133,136698682,136697387,136696057,136694310,136669395,136659378,136656460,136651091,136642569,136639638,136637406,136622981,136614286,136613256,136611387,136605366,136601979,136601042,136592614,136592341,136583740,136580406,136567874,136562615,136561645,136558876,136557818 Gene ID= ENSG00000197442.9 TPM= 9.06 Transcript Type= NA chr6 136634136 136793064 136634136 136793064 - transcript3596.chr6.nnic@MAP3K5 transcript3596.chr6.nnic protein_coding 136791710,136720450,136705110,136698489,136697219,136695951,136694140,136669283,136659219,136656307,136650984,136642520,136639543,136637325,136634136 136793064,136720589,136705133,136698682,136697387,136696057,136694310,136669395,136659378,136656460,136651091,136642569,136639638,136637406,136636775 Gene ID= ENSG00000197442.9 TPM= 12.68 Transcript Type= NA chr6 136557047 136792518 136557047 136792518 - ENST00000359015.4@MAP3K5 ENST00000359015.4 protein_coding 136791710,136720450,136705110,136698489,136697219,136695951,136694140,136669283,136659219,136656307,136650984,136642520,136639543,136637325,136622848,136614159,136613120,136611282,136605209,136601802,136601022,136592437,136592173,136583555,136580301,136567631,136562503,136561533,136558800,136557047 136792518,136720589,136705133,136698682,136697387,136696057,136694310,136669395,136659378,136656460,136651091,136642569,136639638,136637406,136622981,136614286,136613256,136611387,136605366,136601979,136601042,136592614,136592341,136583740,136580406,136567874,136562615,136561645,136558876,136557818 Gene ID= ENSG00000197442.9 TPM= 273.47 Transcript Type= protein_coding chr6 136822585 136913937 136822585 136913937 + ENST00000318471.4@PEX7 ENST00000318471.4 protein_coding 136822585,136825214,136826319,136845615,136846073,136866627,136869890,136872198,136898142,136913458 136822795,136825271,136826469,136845692,136846181,136866733,136870003,136872253,136898241,136913937 Gene ID= ENSG00000112357.12 TPM= 25.36 Transcript Type= protein_coding chr6 136999971 137045180 136999971 137045180 - ENST00000367748.4@IL20RA ENST00000367748.4 protein_coding 137044641,137016968,137009317,137008599,137004621,136999971 137045180,137017103,137009492,137008743,137004760,137002355 Gene ID= ENSG00000016402.13 TPM= 11.09 Transcript Type= protein_coding chr6 136999972 137045153 136999972 137045153 - transcript3615.chr6.nic@IL20RA transcript3615.chr6.nic protein_coding 137044641,137016968,137011274,137008599,137004621,136999972 137045153,137017103,137011452,137009492,137004760,137002355 Gene ID= ENSG00000016402.13 TPM= 2.04 Transcript Type= NA chr6 136999971 137044964 136999971 137044964 - ENST00000316649.9@IL20RA ENST00000316649.9 protein_coding 137044641,137016968,137011274,137009317,137008599,137004621,136999971 137044964,137017103,137011452,137009492,137008743,137004760,137002355 Gene ID= ENSG00000016402.13 TPM= 16.07 Transcript Type= protein_coding chr6 136999971 137044312 136999971 137044312 - ENST00000541547.5@IL20RA ENST00000541547.5 protein_coding 137044092,137016968,137011274,137009317,137008599,137004621,136999971 137044312,137017103,137011452,137009492,137008743,137004760,137002355 Gene ID= ENSG00000016402.13 TPM= 3.4 Transcript Type= protein_coding chr6 137197483 137219118 137197483 137219118 - transcript3625.chr6.nnic@IFNGR1 transcript3625.chr6.nnic protein_coding 137218672,137206963,137206136,137204332,137203499,137200881,137197483 137219118,137207077,137206308,137204504,137203685,137201008,137198639 Gene ID= ENSG00000027697.13 TPM= 2.94 Transcript Type= NA chr6 137197483 137219159 137197483 137219159 - transcript3626.chr6.nnic@IFNGR1 transcript3626.chr6.nnic protein_coding 137219094,137206963,137206136,137204332,137203499,137200881,137197483 137219159,137207077,137206308,137204504,137203685,137201008,137198639 Gene ID= ENSG00000027697.13 TPM= 3.85 Transcript Type= NA chr6 137197484 137219449 137197484 137219449 - ENST00000367739.8@IFNGR1 ENST00000367739.8 protein_coding 137219243,137206963,137206136,137204332,137203499,137200881,137197484 137219449,137207077,137206308,137204504,137203685,137201008,137198639 Gene ID= ENSG00000027697.13 TPM= 114.33 Transcript Type= protein_coding chr6 137867188 137883311 137867188 137883311 + ENST00000612899.4@TNFAIP3 ENST00000612899.4 protein_coding 137867188,137871213,137874845,137875688,137875996,137877076,137878432,137880071,137881035 137867542,137871522,137875035,137875835,137876166,137877256,137879351,137880252,137883311 Gene ID= ENSG00000118503.14 TPM= 7.24 Transcript Type= protein_coding chr6 138088505 138107511 138088505 138107511 - ENST00000421351.3@PERP ENST00000421351.3 protein_coding 138107127,138096354,138088505 138107511,138096494,138092268 Gene ID= ENSG00000112378.11 TPM= 72.44 Transcript Type= protein_coding chr6 138404186 138415572 138404186 138415572 + transcript3638.chr6.nnic@HEBP2 transcript3638.chr6.nnic protein_coding 138404186,138405145,138405971,138412880,138415198 138404597,138405280,138406151,138413154,138415572 Gene ID= ENSG00000051620.10 TPM= 86.93 Transcript Type= NA chr6 138404247 138413173 138404247 138413173 + ENST00000367697.7@HEBP2 ENST00000367697.7 protein_coding 138404247,138405145,138405971,138412880 138404597,138405280,138406033,138413173 Gene ID= ENSG00000051620.10 TPM= 1.81 Transcript Type= protein_coding chr6 138422043 138572540 138422043 138572540 - ENST00000427025.6@NHSL1 ENST00000427025.6 protein_coding 138571710,138496219,138473306,138447001,138430393,138429711,138422043 138572540,138496371,138473433,138447193,138433680,138429843,138424816 Gene ID= ENSG00000135540.11 TPM= 1.81 Transcript Type= protein_coding chr6 138692476 138697288 138692476 138697288 + transcript3644.chr6.nic@AL590617.2 transcript3644.chr6.nic antisense_RNA 138692476,138694393,138696597,138696903 138692617,138694547,138696755,138697288 Gene ID= ENSG00000225177.5 TPM= 2.72 Transcript Type= NA chr6 138904664 138988258 138904664 138988258 - transcript3649.chr6.nic@REPS1 transcript3649.chr6.nic protein_coding 138987530,138947790,138945501,138945219,138944498,138943853,138943513,138941335,138929977,138921037,138920215,138917555,138915858,138914697,138912765,138911276,138908668,138904664 138988258,138947913,138945697,138945372,138944622,138944015,138943576,138941489,138930098,138921124,138920316,138917627,138915976,138914761,138912950,138911371,138908816,138905132 Gene ID= ENSG00000135597.18 TPM= 2.72 Transcript Type= NA chr6 139028682 139043302 139028682 139043302 + ENST00000367660.3@ABRACL ENST00000367660.3 protein_coding 139028682,139034155,139042719 139028875,139034221,139043302 Gene ID= ENSG00000146386.7 TPM= 7.24 Transcript Type= protein_coding chr6 139135112 139180802 139135112 139180802 + ENST00000367658.2@HECA ENST00000367658.2 protein_coding 139135112,139166284,139174385,139176941 139135667,139167324,139174539,139180802 Gene ID= ENSG00000112406.4 TPM= 6.34 Transcript Type= protein_coding chr6 139240061 139292139 139240061 139292139 - ENST00000358430.7@TXLNB ENST00000358430.7 protein_coding 139291921,139288476,139276830,139270456,139262579,139260318,139255564,139247817,139244595,139240061 139292139,139288913,139276921,139270626,139262773,139260437,139255638,139247909,139244690,139243314 Gene ID= ENSG00000164440.14 TPM= 4.98 Transcript Type= protein_coding chr6 139240064 139292364 139240064 139292364 - transcript3657.chr6.nnic@TXLNB transcript3657.chr6.nnic protein_coding 139292229,139288476,139276830,139270456,139262579,139260318,139255564,139247817,139244595,139240064 139292364,139288913,139276921,139270626,139262773,139260437,139255638,139247909,139244690,139243314 Gene ID= ENSG00000164440.14 TPM= 2.26 Transcript Type= NA chr6 139456902 139474610 139456902 139474610 - transcript3661.chr6.nnic@LINC01625 transcript3661.chr6.nnic lincRNA 139474566,139472932,139472527,139456902 139474610,139473055,139472595,139457857 Gene ID= ENSG00000238099.2 TPM= 1.81 Transcript Type= NA chr6 139464821 139474610 139464821 139474610 - transcript3662.chr6.nnic@LINC01625 transcript3662.chr6.nnic lincRNA 139474566,139472932,139472527,139464821 139474610,139473055,139472595,139467061 Gene ID= ENSG00000238099.2 TPM= 1.81 Transcript Type= NA chr6 140079464 140093720 140079464 140093720 + transcript3664.chr6.nnic@AL138737.1 transcript3664.chr6.nnic lincRNA 140079464,140086682,140092991 140079598,140086756,140093720 Gene ID= ENSG00000236013.5 TPM= 2.72 Transcript Type= NA chr6 142147162 142220946 142147162 142220946 + ENST00000620996.4@VTA1 ENST00000620996.4 protein_coding 142147162,142166228,142169550,142170346,142189426,142198439,142218498 142147399,142166322,142169677,142170421,142189534,142198615,142220946 Gene ID= ENSG00000009844.15 TPM= 1.81 Transcript Type= protein_coding chr6 142147257 142219067 142147257 142219067 + ENST00000367621.1@VTA1 ENST00000367621.1 protein_coding 142147257,142169550,142170346,142189426,142198439,142203985,142218498 142147399,142169677,142170421,142189534,142198615,142204065,142219067 Gene ID= ENSG00000009844.15 TPM= 1.81 Transcript Type= protein_coding chr6 142751470 142772999 142751470 142772999 - transcript3669.chr6.nic@HIVEP2 transcript3669.chr6.nic protein_coding 142769552,142768382,142764799,142761464,142759772,142751470 142772999,142768536,142764974,142761565,142760667,142753931 Gene ID= ENSG00000010818.9 TPM= 8.15 Transcript Type= NA chr6 143060850 143340302 143060850 143340302 + transcript3674.chr6.nnic@AIG1 transcript3674.chr6.nnic protein_coding 143060850,143095929,143136835,143165082,143284110,143333282,143339639 143061066,143096069,143136990,143165183,143284225,143333445,143340302 Gene ID= ENSG00000146416.17 TPM= 2.72 Transcript Type= NA chr6 143060902 143340300 143060902 143340300 + transcript3675.chr6.nnic@AIG1 transcript3675.chr6.nnic protein_coding 143060902,143136835,143165082,143284110,143333282,143337978 143061066,143136990,143165183,143284225,143333445,143340300 Gene ID= ENSG00000146416.17 TPM= 1.81 Transcript Type= NA chr6 143060903 143341056 143060903 143341056 + transcript3677.chr6.nnic@AIG1 transcript3677.chr6.nnic protein_coding 143060903,143136835,143165082,143284110,143333282,143340482 143061066,143136990,143165183,143284225,143333445,143341056 Gene ID= ENSG00000146416.17 TPM= 1.81 Transcript Type= NA chr6 143060889 143343635 143060889 143343635 + transcript3678.chr6.nnic@AIG1 transcript3678.chr6.nnic protein_coding 143060889,143136835,143165082,143284110,143333282,143342575 143061066,143136990,143165183,143284225,143333445,143343635 Gene ID= ENSG00000146416.17 TPM= 1.81 Transcript Type= NA chr6 143060816 143335945 143060816 143335945 + transcript3679.chr6.nic@AIG1 transcript3679.chr6.nic protein_coding 143060816,143136835,143165082,143284110,143333282 143061066,143136990,143165183,143284225,143335945 Gene ID= ENSG00000146416.17 TPM= 3.62 Transcript Type= NA chr6 143060904 143340982 143060904 143340982 + transcript3680.chr6.nic@AIG1 transcript3680.chr6.nic protein_coding 143060904,143165082,143284110,143333282,143339639 143061066,143165183,143284225,143333445,143340982 Gene ID= ENSG00000146416.17 TPM= 1.81 Transcript Type= NA chr6 143060876 143340304 143060876 143340304 + ENST00000357847.8@AIG1 ENST00000357847.8 protein_coding 143060876,143136835,143165082,143284110,143333282,143339639 143061066,143136990,143165183,143284225,143333445,143340304 Gene ID= ENSG00000146416.17 TPM= 45.28 Transcript Type= protein_coding chr6 143060901 143190597 143060901 143190597 + ENST00000494282.6@AIG1 ENST00000494282.6 protein_coding 143060901,143136835,143165082,143187629 143061066,143136990,143165183,143190597 Gene ID= ENSG00000146416.17 TPM= 8.15 Transcript Type= protein_coding chr6 143060899 143190597 143060899 143190597 + ENST00000629020.2@AIG1 ENST00000629020.2 protein_coding 143060899,143136835,143165082,143187388 143061066,143136990,143165183,143190597 Gene ID= ENSG00000146416.17 TPM= 2.72 Transcript Type= protein_coding chr6 143426989 143450673 143426989 143450673 - ENST00000237283.8@ADAT2 ENST00000237283.8 protein_coding 143450563,143438590,143433831,143432505,143428612,143426989 143450673,143438694,143433981,143432611,143428684,143428506 Gene ID= ENSG00000189007.15 TPM= 1.81 Transcript Type= protein_coding chr6 143450790 143490004 143450790 143490004 + transcript3695.chr6.nic@PEX3 transcript3695.chr6.nic protein_coding 143450790,143462916,143468122,143470961,143471383,143471557,143472160,143474786,143479076,143485152,143489143 143451115,143462997,143468165,143471085,143471449,143471611,143472328,143474856,143479198,143485248,143490004 Gene ID= ENSG00000034693.14 TPM= 4.53 Transcript Type= NA chr6 143450980 143490010 143450980 143490010 + ENST00000367591.4@PEX3 ENST00000367591.4 protein_coding 143450980,143459085,143462916,143468122,143470961,143471383,143471557,143472160,143474786,143479076,143485152,143489143 143451115,143459216,143462997,143468165,143471085,143471449,143471611,143472328,143474856,143479198,143485248,143490010 Gene ID= ENSG00000034693.14 TPM= 7.24 Transcript Type= protein_coding chr6 143494811 143511690 143494811 143511690 - ENST00000002165.10@FUCA2 ENST00000002165.10 protein_coding 143511411,143507237,143503913,143502355,143501932,143497389,143494811 143511690,143507424,143504252,143502565,143502122,143497497,143495847 Gene ID= ENSG00000001036.13 TPM= 172.96 Transcript Type= protein_coding chr6 143677946 143830828 143677946 143830828 + transcript3710.chr6.nnic@PHACTR2 transcript3710.chr6.nnic protein_coding 143677946,143712016,143748985,143753754,143765444,143772258,143774059,143777328,143783219,143788773,143807057,143823674 143678209,143712183,143749065,143753912,143765798,143772457,143774215,143777383,143783280,143788910,143807133,143830828 Gene ID= ENSG00000112419.14 TPM= 9.66 Transcript Type= NA chr6 143677946 143830828 143677946 143830828 + transcript3713.chr6.nic@PHACTR2 transcript3713.chr6.nic protein_coding 143677946,143712016,143748985,143765261,143772258,143774059,143777328,143783219,143788773,143807057,143823674 143678209,143712183,143749065,143765798,143772457,143774215,143777383,143783280,143788910,143807133,143830828 Gene ID= ENSG00000112419.14 TPM= 9.66 Transcript Type= NA chr6 143677946 143830828 143677946 143830828 + transcript3714.chr6.nnic@PHACTR2 transcript3714.chr6.nnic protein_coding 143677946,143712016,143765261,143772258,143774059,143777328,143783219,143788773,143807057,143823674 143678209,143712183,143765798,143772457,143774215,143777383,143783280,143788910,143807133,143830828 Gene ID= ENSG00000112419.14 TPM= 9.66 Transcript Type= NA chr6 143843309 143863810 143843309 143863810 + transcript3720.chr6.nnic@LTV1 transcript3720.chr6.nnic protein_coding 143843309,143844486,143846051,143850131,143857303,143857752,143860426,143862104,143862844,143863086,143863417 143843480,143844617,143846224,143850218,143857583,143858007,143860553,143862243,143862896,143863286,143863810 Gene ID= ENSG00000135521.8 TPM= 1.81 Transcript Type= NA chr6 143843344 143863812 143843344 143863812 + ENST00000367576.5@LTV1 ENST00000367576.5 protein_coding 143843344,143844486,143846051,143850131,143857303,143857752,143860426,143862104,143862844,143863086,143863417 143843480,143844617,143846224,143850218,143857444,143858007,143860553,143862243,143862896,143863286,143863812 Gene ID= ENSG00000135521.8 TPM= 30.79 Transcript Type= protein_coding chr6 143940302 144008262 143940302 144008262 - transcript3723.chr6.nic@PLAGL1 transcript3723.chr6.nic protein_coding 144008090,143985135,143968907,143966158,143964787,143960469,143947985,143940302 144008262,143985174,143968978,143966230,143964818,143960542,143948460,143942663 Gene ID= ENSG00000118495.18 TPM= 2.87 Transcript Type= NA chr6 143940302 144008262 143940302 144008262 - transcript3724.chr6.nic@PLAGL1 transcript3724.chr6.nic protein_coding 144008090,143968907,143966158,143964787,143960469,143947985,143940302 144008262,143968978,143966198,143964818,143960542,143948460,143942663 Gene ID= ENSG00000118495.18 TPM= 5.59 Transcript Type= NA chr6 143940302 144008262 143940302 144008262 - transcript3725.chr6.nic@PLAGL1 transcript3725.chr6.nic protein_coding 144008090,143968907,143966158,143964787,143960469,143947985,143940302 144008262,143968978,143966230,143964818,143960542,143948460,143942663 Gene ID= ENSG00000118495.18 TPM= 3.78 Transcript Type= NA chr6 143940302 144008256 143940302 144008256 - transcript3726.chr6.nic@PLAGL1 transcript3726.chr6.nic protein_coding 144008090,143968907,143966158,143964787,143960469,143947985,143940302 144008256,143968978,143966285,143964818,143960542,143948460,143942663 Gene ID= ENSG00000118495.18 TPM= 3.78 Transcript Type= NA chr6 143940302 144008412 143940302 144008412 - transcript3734.chr6.nic@PLAGL1 transcript3734.chr6.nic protein_coding 144008090,143968907,143964787,143960469,143947985,143940302 144008412,143968978,143964818,143960556,143948460,143942663 Gene ID= ENSG00000118495.18 TPM= 2.87 Transcript Type= NA chr6 143940302 144008412 143940302 144008412 - transcript3735.chr6.nic@PLAGL1 transcript3735.chr6.nic protein_coding 144008090,143968907,143966158,143964787,143960469,143940302 144008412,143968978,143966198,143964818,143960542,143942663 Gene ID= ENSG00000118495.18 TPM= 6.24 Transcript Type= NA chr6 143940302 144008256 143940302 144008256 - transcript3738.chr6.nic@PLAGL1 transcript3738.chr6.nic protein_coding 144008090,143968907,143964787,143960469,143940302 144008256,143968978,143964818,143960542,143942663 Gene ID= ENSG00000118495.18 TPM= 4.43 Transcript Type= NA chr6 144150526 144188370 144150526 144188370 + ENST00000367568.4@STX11 ENST00000367568.4 protein_coding 144150526,144186623 144150703,144188370 Gene ID= ENSG00000135604.9 TPM= 4.53 Transcript Type= protein_coding chr6 144285029 144462725 144285029 144462725 + transcript3741.chr6.nic@UTRN transcript3741.chr6.nic protein_coding 144285029,144291737,144403123,144421878,144423549,144423986,144426287,144428778,144429581,144435935,144437565,144438745,144440352,144444281,144447211,144447602,144448600,144451370,144453782,144458770,144459174,144461197,144462654 144285821,144291907,144403184,144421970,144423626,144424078,144426459,144428893,144429741,144436138,144437746,144438895,144440471,144444382,144447318,144447781,144448769,144451493,144453869,144459011,144459354,144461342,144462725 Gene ID= ENSG00000152818.18 TPM= 2.72 Transcript Type= NA chr6 145625304 145735855 145625304 145735855 - ENST00000367519.8@EPM2A ENST00000367519.8 protein_coding 145735198,145686122,145635245,145625304 145735855,145686296,145635486,145627693 Gene ID= ENSG00000112425.14 TPM= 10.87 Transcript Type= protein_coding chr6 146543693 146554965 146543693 146554965 + ENST00000367495.3@RAB32 ENST00000367495.3 protein_coding 146543693,146549464,146554456 146544121,146549741,146554965 Gene ID= ENSG00000118508.4 TPM= 48.9 Transcript Type= protein_coding chr6 146843113 147204614 146843113 147204614 - transcript3768.chr6.nnic@STXBP5-AS1 transcript3768.chr6.nnic antisense_RNA 147204413,147173815,147173593,147074805,147001441,146972045,146911552,146851118,146850825,146843113 147204614,147173948,147173647,147074847,147001543,146972070,146911665,146851331,146851023,146844712 Gene ID= ENSG00000233452.6 TPM= 1.81 Transcript Type= NA chr6 147203702 147246592 147203702 147246592 + transcript3770.chr6.nnic@STXBP5 transcript3770.chr6.nnic protein_coding 147203702,147205971,147235250,147239170,147245014 147204682,147206068,147235331,147239270,147246592 Gene ID= ENSG00000164506.14 TPM= 2.72 Transcript Type= NA chr6 149504733 149546038 149504733 149546038 - ENST00000253329.2@PPIL4 ENST00000253329.2 protein_coding 149545936,149541519,149541367,149540942,149535596,149534678,149533458,149526652,149525143,149521060,149517354,149512155,149504733 149546038,149541586,149541431,149541059,149535738,149534774,149533574,149526776,149525209,149521171,149517450,149512302,149505704 Gene ID= ENSG00000131013.3 TPM= 35.32 Transcript Type= protein_coding chr6 149566294 149591748 149566294 149591748 + ENST00000367419.9@GINM1 ENST00000367419.9 protein_coding 149566294,149572285,149572507,149578822,149579834,149580593,149582440,149590727 149566534,149572344,149572603,149578973,149579990,149580723,149582603,149591748 Gene ID= ENSG00000055211.12 TPM= 120.44 Transcript Type= protein_coding chr6 149594877 149648804 149594877 149648804 - ENST00000367411.6@KATNA1 ENST00000367411.6 protein_coding 149648469,149638386,149632759,149623103,149604661,149603268,149601594,149598224,149597507,149597063,149594877 149648804,149638560,149632916,149623283,149604782,149603373,149601752,149598350,149597641,149597189,149595234 Gene ID= ENSG00000186625.13 TPM= 15.39 Transcript Type= protein_coding chr6 149682919 149718105 149682919 149718105 - ENST00000392273.7@LATS1 ENST00000392273.7 protein_coding 149717849,149701779,149695074,149682919 149718105,149702266,149695221,149684592 Gene ID= ENSG00000131023.12 TPM= 1.81 Transcript Type= protein_coding chr6 149724323 149746552 149724323 149746552 - transcript3806.chr6.nnic@NUP43 transcript3806.chr6.nnic protein_coding 149746376,149745940,149743638,149742390,149738643,149736471,149731613,149728379,149724323 149746552,149746062,149743715,149742570,149738778,149736622,149731735,149728478,149727198 Gene ID= ENSG00000120253.13 TPM= 5.89 Transcript Type= NA chr6 149724315 149746572 149724315 149746572 - ENST00000340413.6@NUP43 ENST00000340413.6 protein_coding 149746376,149745940,149743638,149742390,149738643,149736471,149731613,149724315 149746572,149746062,149743715,149742570,149738778,149736622,149731735,149727198 Gene ID= ENSG00000120253.13 TPM= 12.22 Transcript Type= protein_coding chr6 149749444 149802530 149749444 149802530 + ENST00000367378.5@PCMT1 ENST00000367378.5 protein_coding 149749444,149771162,149773138,149789954,149793549,149796415,149802200 149749956,149771266,149773169,149790058,149793669,149796500,149802530 Gene ID= ENSG00000120265.16 TPM= 20.83 Transcript Type= protein_coding chr6 149818798 149864384 149818798 149864384 - transcript3822.chr6.nnic@LRP11 transcript3822.chr6.nnic protein_coding 149863408,149853003,149842983,149837338,149836085,149818798 149864384,149853160,149843124,149837463,149836297,149820703 Gene ID= ENSG00000120256.9 TPM= 7.24 Transcript Type= NA chr6 149818798 149864026 149818798 149864026 - ENST00000239367.6@LRP11 ENST00000239367.6 protein_coding 149863408,149853003,149842983,149837338,149836085,149826264,149818798 149864026,149853160,149843124,149837463,149836297,149826359,149820703 Gene ID= ENSG00000120256.9 TPM= 18.11 Transcript Type= protein_coding chr6 149916878 149923078 149916878 149923078 - ENST00000367360.6@RAET1G ENST00000367360.6 protein_coding 149922926,149919553,149919043,149918174,149916878 149923078,149919816,149919324,149918384,149917074 Gene ID= ENSG00000203722.7 TPM= 3.62 Transcript Type= protein_coding chr6 149942000 149949235 149942000 149949235 + ENST00000367351.3@ULBP2 ENST00000367351.3 protein_coding 149942000,149945309,149946372,149947320,149948723 149942157,149945572,149946653,149947451,149949235 Gene ID= ENSG00000131015.4 TPM= 1.81 Transcript Type= protein_coding chr6 149964007 149973710 149964007 149973710 + ENST00000229708.3@ULBP1 ENST00000229708.3 protein_coding 149964007,149968607,149969085,149970016,149971369 149964134,149968870,149969360,149970147,149973710 Gene ID= ENSG00000111981.4 TPM= 1.81 Transcript Type= protein_coding chr6 150599882 150841666 150599882 150841666 + transcript3832.chr6.nnic@PLEKHG1 transcript3832.chr6.nnic protein_coding 150599882,150650728,150733584,150768638,150786390,150795856,150800719,150804610,150809105,150809381,150809648,150818183,150819679,150821195,150823654,150830582,150839833 150600017,150650786,150734092,150768738,150786459,150795902,150800869,150804741,150809287,150809476,150809734,150818216,150819774,150821233,150823676,150832205,150841666 Gene ID= ENSG00000120278.15 TPM= 4.53 Transcript Type= NA chr6 150865679 151101885 150865679 151101885 + ENST00000611279.4@MTHFD1L ENST00000611279.4 protein_coding 150865679,150876090,150877634,150877773,150882762,150885634,150887842,150905650,150918577,150922205,150926122,150936804,150938699,150944486,150945467,150949031,150955995,150960275,150964969,150971947,151009819,151013779,151014880,151015516,151034493,151036965,151092467,151101526 150866049,150876174,150877684,150877826,150882886,150885734,150887981,150905761,150918668,150922302,150926295,150936940,150938745,150944593,150945541,150949133,150956071,150960415,150965037,150972058,151009958,151013820,151014980,151015693,151034600,151037117,151092587,151101885 Gene ID= ENSG00000120254.15 TPM= 12.68 Transcript Type= protein_coding chr6 150865716 150899021 150865716 150899021 + ENST00000367307.8@MTHFD1L ENST00000367307.8 protein_coding 150865716,150876090,150877634,150877773,150882762,150885634,150887845,150898860 150866049,150876174,150877684,150877826,150882886,150885734,150887981,150899021 Gene ID= ENSG00000120254.15 TPM= 4.53 Transcript Type= protein_coding chr6 151325688 151356773 151325688 151356773 + ENST00000354675.10@AKAP12 ENST00000354675.10 protein_coding 151325688,151348711,151355727 151325885,151353752,151356773 Gene ID= ENSG00000131016.16 TPM= 11.77 Transcript Type= protein_coding chr6 151364116 151391023 151364116 151391023 - transcript3848.chr6.nnic@ZBTB2 transcript3848.chr6.nnic protein_coding 151390880,151373465,151364116 151391023,151373649,151366892 Gene ID= ENSG00000181472.4 TPM= 4.53 Transcript Type= NA chr6 151364117 151391548 151364117 151391548 - ENST00000325144.4@ZBTB2 ENST00000325144.4 protein_coding 151391420,151373465,151364117 151391548,151373649,151366892 Gene ID= ENSG00000181472.4 TPM= 8.15 Transcript Type= protein_coding chr6 151404889 151452174 151404889 151452174 - transcript3850.chr6.nic@RMND1 transcript3850.chr6.nic protein_coding 151452016,151445308,151436420,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404889 151452174,151445825,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267 Gene ID= ENSG00000155906.16 TPM= 3.02 Transcript Type= NA chr6 151404763 151452181 151404763 151452181 - ENST00000622845.4@RMND1 ENST00000622845.4 protein_coding 151452016,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404763 151452181,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267 Gene ID= ENSG00000155906.16 TPM= 1.2 Transcript Type= protein_coding chr6 151404854 151452124 151404854 151452124 - ENST00000367303.8@RMND1 ENST00000367303.8 protein_coding 151452016,151445308,151436446,151433155,151430138,151427482,151423525,151422541,151421245,151417279,151405720,151404854 151452124,151445825,151436554,151433230,151430177,151427582,151423631,151422605,151421321,151417399,151405836,151405267 Gene ID= ENSG00000155906.16 TPM= 19.32 Transcript Type= protein_coding chr6 151452287 151470101 151452287 151470101 + ENST00000367294.3@ARMT1 ENST00000367294.3 protein_coding 151452287,151454548,151458328,151464453,151468343 151452586,151454653,151458572,151464618,151470101 Gene ID= ENSG00000146476.10 TPM= 49.35 Transcript Type= protein_coding chr6 151452258 151470097 151452258 151470097 + ENST00000545879.5@ARMT1 ENST00000545879.5 protein_coding 151452258,151458328,151464453,151468343 151452586,151458572,151464618,151470097 Gene ID= ENSG00000146476.10 TPM= 1.36 Transcript Type= protein_coding chr6 151494826 151621192 151494826 151621192 + transcript3861.chr6.nnic@CCDC170 transcript3861.chr6.nnic protein_coding 151494826,151536318,151538045,151544572,151548304,151573174,151585889,151593107,151596335,151615443,151617947 151494989,151536446,151538301,151544716,151548489,151573491,151586089,151593280,151596577,151615679,151621192 Gene ID= ENSG00000120262.9 TPM= 2.72 Transcript Type= NA chr6 151494027 151619000 151494027 151619000 + transcript3866.chr6.nnic@CCDC170 transcript3866.chr6.nnic protein_coding 151494027,151538045,151544572,151548304,151573174,151585889,151593107,151596335,151615443,151617947 151494185,151538301,151544716,151548489,151573491,151586089,151593280,151596577,151615679,151619000 Gene ID= ENSG00000120262.9 TPM= 3.62 Transcript Type= NA chr6 152366992 152381362 152366992 152381362 - ENST00000454018.6@SYNE1 ENST00000454018.6 protein_coding 152381006,152376776,152376381,152373037,152369471,152368972,152366992 152381362,152376912,152376558,152373219,152369614,152369127,152367382 Gene ID= ENSG00000131018.22 TPM= 3.62 Transcript Type= protein_coding chr6 152697895 152724567 152697895 152724567 + ENST00000367245.5@MYCT1 ENST00000367245.5 protein_coding 152697895,152721742 152698098,152724567 Gene ID= ENSG00000120279.6 TPM= 6.34 Transcript Type= protein_coding chr6 152970529 152983579 152970529 152983579 - ENST00000367241.3@FBXO5 ENST00000367241.3 protein_coding 152983234,152974907,152973046,152972272,152970529 152983579,152975621,152973136,152972454,152971414 Gene ID= ENSG00000112029.9 TPM= 4.53 Transcript Type= protein_coding chr6 152988075 153002554 152988075 153002554 - transcript3878.chr6.nic@MTRF1L transcript3878.chr6.nic protein_coding 153002427,152998550,152995244,152994513,152992857,152991185,152988075 153002554,152998629,152995319,152994676,152992974,152991321,152990095 Gene ID= ENSG00000112031.15 TPM= 2.11 Transcript Type= NA chr6 152988073 153002665 152988073 153002665 - transcript3879.chr6.nic@MTRF1L transcript3879.chr6.nic protein_coding 153002427,152998550,152995136,152994513,152992857,152991185,152988073 153002665,152998629,152995294,152994676,152992974,152991416,152990095 Gene ID= ENSG00000112031.15 TPM= 2.11 Transcript Type= NA chr6 152987362 153002685 152987362 153002685 - ENST00000367231.9@MTRF1L ENST00000367231.9 protein_coding 153002427,152998550,152995136,152994513,152992857,152987362 153002685,152998629,152995319,152994676,152992974,152990095 Gene ID= ENSG00000112031.15 TPM= 11.77 Transcript Type= protein_coding chr6 152987362 153002685 152987362 153002685 - ENST00000367233.9@MTRF1L ENST00000367233.9 protein_coding 153002427,152998550,152995136,152994513,152992857,152991185,152987362 153002685,152998629,152995319,152994676,152992974,152991321,152990095 Gene ID= ENSG00000112031.15 TPM= 13.88 Transcript Type= protein_coding chr6 154387504 154510659 154387504 154510659 - ENST00000607772.5@CNKSR3 ENST00000607772.5 protein_coding 154510063,154450095,154442088,154441292,154433466,154430472,154428128,154422915,154422506,154414299,154410934,154410343,154387504 154510659,154450258,154442290,154441379,154433507,154430591,154428187,154422983,154422652,154414423,154411142,154410432,154406652 Gene ID= ENSG00000153721.18 TPM= 9.96 Transcript Type= protein_coding chr6 154733363 154908866 154733363 154908866 + transcript3886.chr6.nic@SCAF8 transcript3886.chr6.nic protein_coding 154733363,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939,154907730 154733930,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154833409,154908866 Gene ID= ENSG00000213079.9 TPM= 1.81 Transcript Type= NA chr6 154733325 154834060 154733325 154834060 + ENST00000367178.7@SCAF8 ENST00000367178.7 protein_coding 154733325,154773989,154778001,154787861,154792823,154795009,154801971,154803544,154805369,154808070,154808686,154810015,154815716,154818479,154820177,154822276,154824234,154827172,154830922,154831939 154733930,154774072,154778045,154788022,154792976,154795139,154802147,154803623,154805486,154808201,154808798,154810208,154815816,154818592,154820333,154822409,154824378,154827240,154831140,154834060 Gene ID= ENSG00000213079.9 TPM= 21.73 Transcript Type= protein_coding chr6 154995283 155257730 154995283 155257730 + transcript3890.chr6.nic@TIAM2 transcript3890.chr6.nic protein_coding 154995283,155090289,155127490,155129218,155137177,155144606,155148110,155164415,155165263,155176816,155179039,155179378,155182226,155183237,155211204,155240530,155244011,155244658,155245623,155248000,155249851,155250913,155251945,155252948,155253973,155254419,155256484 154995492,155090379,155127600,155130417,155137612,155144778,155148334,155164600,155165409,155176977,155179143,155179456,155182318,155183500,155211307,155240709,155244079,155244783,155245731,155248179,155249969,155251021,155252003,155253053,155254060,155254573,155257730 Gene ID= ENSG00000146426.17 TPM= 7.24 Transcript Type= NA chr6 155253147 155314537 155253147 155314537 - transcript3891.chr6.nnic@TFB1M transcript3891.chr6.nnic protein_coding 155314296,155311188,155298477,155296953,155285158,155260273,155256408,155254263,155253147 155314537,155311339,155298585,155297104,155285277,155260400,155258082,155254912,155253764 Gene ID= ENSG00000029639.10 TPM= 36.22 Transcript Type= NA chr6 155247234 155314484 155247234 155314484 - transcript3893.chr6.nnic@TFB1M transcript3893.chr6.nnic protein_coding 155314296,155311188,155298477,155296953,155285158,155253626,155247234 155314484,155311339,155298585,155297104,155285277,155253764,155247919 Gene ID= ENSG00000029639.10 TPM= 1.81 Transcript Type= NA chr6 156777927 157186617 156777927 157186617 + transcript3902.chr6.nic@ARID1B transcript3902.chr6.nic protein_coding 156777927,156829227,156901376,156935466,157084662,157110472,157133028,157148624,157167040,157174008,157174847,157180969,157184231,157186355 156779471,156829421,156901525,156935576,157084905,157110561,157133207,157148951,157167185,157174117,157175005,157181178,157184435,157186617 Gene ID= ENSG00000049618.22 TPM= 1.81 Transcript Type= NA chr6 156778928 157186620 156778928 157186620 + transcript3903.chr6.nnic@ARID1B transcript3903.chr6.nnic protein_coding 156778928,156829227,156901376,156935466,157084662,157110472,157133028,157148624,157167040,157174008,157180969,157184231,157186106 156779471,156829421,156901525,156935576,157084905,157110561,157133207,157148951,157167185,157174117,157181178,157184435,157186620 Gene ID= ENSG00000049618.22 TPM= 1.81 Transcript Type= NA chr6 156777565 156902735 156777565 156902735 + transcript3908.chr6.nic@ARID1B transcript3908.chr6.nic protein_coding 156777565,156829227,156901376 156779471,156829421,156902735 Gene ID= ENSG00000049618.22 TPM= 1.81 Transcript Type= NA chr6 157381518 157673943 157381518 157673943 + transcript3916.chr6.nnic@ZDHHC14 transcript3916.chr6.nnic protein_coding 157381518,157542585,157592988,157628349,157632842,157645737,157647259,157653525,157672724 157382266,157542745,157593146,157628374,157632882,157645839,157647368,157653627,157673943 Gene ID= ENSG00000175048.16 TPM= 2.72 Transcript Type= NA chr6 157381133 157678146 157381133 157678146 + ENST00000359775.9@ZDHHC14 ENST00000359775.9 protein_coding 157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672724 157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157678146 Gene ID= ENSG00000175048.16 TPM= 9.06 Transcript Type= protein_coding chr6 157381133 157673945 157381133 157673945 + ENST00000414563.6@ZDHHC14 ENST00000414563.6 protein_coding 157381133,157542585,157592988,157628349,157632834,157645737,157647259,157653525,157672769 157382266,157542745,157593146,157628486,157632882,157645839,157647368,157653627,157673945 Gene ID= ENSG00000175048.16 TPM= 10.87 Transcript Type= protein_coding chr6 157981837 158067533 157981837 158067533 + transcript3934.chr6.nic@SYNJ2 transcript3934.chr6.nic protein_coding 157981837,158017204,158028756,158033455,158043316,158054967,158059257,158061992,158063791,158064601,158064826,158066444 157982088,158017290,158029026,158033680,158043399,158055028,158059353,158062164,158063872,158064750,158064991,158067533 Gene ID= ENSG00000078269.14 TPM= 1.81 Transcript Type= NA chr6 158110557 158168243 158110557 158168243 - transcript3941.chr6.nnic@SERAC1 transcript3941.chr6.nnic protein_coding 158168140,158158273,158155315,158151039,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158110557 158168243,158158364,158155351,158151206,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119120,158117821,158116282,158114971,158113592,158111502 Gene ID= ENSG00000122335.13 TPM= 1.81 Transcript Type= NA chr6 158109517 158168296 158109517 158168296 - transcript3943.chr6.nic@SERAC1 transcript3943.chr6.nic protein_coding 158168140,158158273,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158109517 158168296,158158364,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119170,158117821,158116282,158114971,158113592,158111502 Gene ID= ENSG00000122335.13 TPM= 3.62 Transcript Type= NA chr6 158110558 158168296 158110558 158168296 - transcript3946.chr6.nic@SERAC1 transcript3946.chr6.nic protein_coding 158168140,158158273,158155315,158150453,158148865,158146782,158144299,158143056,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158110558 158168296,158158364,158155351,158150589,158148954,158146913,158144420,158143184,158128270,158120575,158119170,158117821,158116282,158114971,158113592,158111502 Gene ID= ENSG00000122335.13 TPM= 1.81 Transcript Type= NA chr6 158109515 158168270 158109515 158168270 - ENST00000367104.7@SERAC1 ENST00000367104.7 protein_coding 158168140,158158273,158155315,158150453,158148865,158146782,158144299,158143056,158130373,158128108,158120425,158119029,158117727,158116185,158114789,158113449,158109515 158168270,158158364,158155351,158150589,158148954,158146913,158144420,158143184,158130486,158128270,158120575,158119170,158117821,158116282,158114971,158113592,158111502 Gene ID= ENSG00000122335.13 TPM= 28.07 Transcript Type= protein_coding chr6 158312488 158511828 158312488 158511828 + ENST00000367097.7@TULP4 ENST00000367097.7 protein_coding 158312488,158413065,158429736,158448996,158452134,158461563,158479751,158481055,158489588,158493573,158494753,158498669,158501678,158506578 158314268,158413193,158429897,158449176,158452268,158461729,158479975,158481289,158489732,158493717,158494846,158498812,158504178,158511828 Gene ID= ENSG00000130338.12 TPM= 7.24 Transcript Type= protein_coding chr6 158560063 158635433 158560063 158635433 + transcript3954.chr6.nnic@TMEM181 transcript3954.chr6.nnic protein_coding 158560063,158573420,158580940,158583954,158585304,158589648,158605267,158607244,158608333,158608659,158623550,158625104,158625703,158628408,158629730,158631323,158631810 158560232,158573523,158580995,158584044,158585425,158589782,158605347,158607343,158608463,158608750,158623607,158625206,158625754,158628490,158629819,158631389,158635433 Gene ID= ENSG00000146433.8 TPM= 1.81 Transcript Type= NA chr6 158636474 158644739 158636474 158644739 - ENST00000367089.7@DYNLT1 ENST00000367089.7 protein_coding 158644682,158641319,158637771,158637128,158636474 158644739,158641360,158637894,158637205,158636897 Gene ID= ENSG00000146425.10 TPM= 111.38 Transcript Type= protein_coding chr6 158765741 158818227 158765741 158818227 - ENST00000337147.11@EZR ENST00000337147.11 protein_coding 158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765741 158818227,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078 Gene ID= ENSG00000092820.17 TPM= 476.84 Transcript Type= protein_coding chr6 158765748 158819412 158765748 158819412 - ENST00000367075.3@EZR ENST00000367075.3 protein_coding 158819317,158818082,158789288,158787108,158785309,158784644,158783520,158776408,158771244,158770764,158769784,158769326,158767261,158765748 158819412,158818166,158789371,158787203,158785583,158784727,158783666,158776504,158771407,158770894,158769944,158769418,158767512,158767078 Gene ID= ENSG00000092820.17 TPM= 597.59 Transcript Type= protein_coding chr6 158972871 159000187 158972871 159000187 - ENST00000367069.6@RSPH3 ENST00000367069.6 protein_coding 158999435,158993839,158986280,158983662,158982485,158980774,158978260,158972871 159000187,158993926,158986421,158983807,158982688,158980936,158978346,158977848 Gene ID= ENSG00000130363.11 TPM= 6.34 Transcript Type= protein_coding chr6 158981590 159000185 158981590 159000185 - transcript3987.chr6.nic@RSPH3 transcript3987.chr6.nic protein_coding 158999435,158993839,158986280,158983662,158981590 159000185,158993926,158986421,158983807,158982688 Gene ID= ENSG00000130363.11 TPM= 1.81 Transcript Type= NA chr6 158977236 159000166 158977236 159000166 - ENST00000252655.1@RSPH3 ENST00000252655.1 protein_coding 158999435,158993839,158986280,158983662,158982485,158980774,158978260,158977236 159000166,158993926,158986421,158983807,158982688,158980936,158978346,158977848 Gene ID= ENSG00000130363.11 TPM= 3.62 Transcript Type= protein_coding chr6 159034468 159045152 159034468 159045152 - ENST00000367066.7@TAGAP ENST00000367066.7 protein_coding 159044879,159044120,159043978,159043589,159042078,159041354,159040723,159039114,159038114,159034468 159045152,159044204,159044031,159043655,159042244,159041515,159040832,159039309,159038228,159037124 Gene ID= ENSG00000164691.16 TPM= 10.87 Transcript Type= protein_coding chr6 159679063 159727405 159679063 159727405 - transcript4011.chr6.nic@SOD2 transcript4011.chr6.nic protein_coding 159727266,159692661,159688126,159684854,159679063 159727405,159692863,159688242,159685033,159682638 Gene ID= ENSG00000112096.16 TPM= 99.61 Transcript Type= NA chr6 159679064 159693234 159679064 159693234 - ENST00000367055.8@SOD2 ENST00000367055.8 protein_coding 159693145,159692661,159688126,159684854,159682474,159679064 159693234,159692863,159688242,159685033,159682638,159679298 Gene ID= ENSG00000112096.16 TPM= 45.28 Transcript Type= protein_coding chr6 159690919 159693244 159690919 159693244 - ENST00000452684.2@SOD2 ENST00000452684.2 protein_coding 159693145,159690919 159693244,159692863 Gene ID= ENSG00000112096.16 TPM= 2.72 Transcript Type= protein_coding chr6 159725585 159756319 159725585 159756319 + ENST00000358372.8@WTAP ENST00000358372.8 protein_coding 159725585,159736258,159738990,159742088,159743665,159748191,159753460,159755028 159727333,159736295,159739045,159742146,159743792,159748369,159753614,159756319 Gene ID= ENSG00000146457.14 TPM= 18.11 Transcript Type= protein_coding chr6 159726987 159751169 159726987 159751169 + transcript4006.chr6.nic@WTAP transcript4006.chr6.nic protein_coding 159726987,159736258,159738990,159742088,159743665,159748191 159727333,159736295,159739045,159742146,159743792,159751169 Gene ID= ENSG00000146457.14 TPM= 13.58 Transcript Type= NA chr6 159727500 159756317 159727500 159756317 + ENST00000621533.4@WTAP ENST00000621533.4 protein_coding 159727500,159736258,159738990,159742088,159743665,159748191,159753460,159755028 159727703,159736295,159739045,159742146,159743792,159748369,159753614,159756317 Gene ID= ENSG00000146457.14 TPM= 31.09 Transcript Type= protein_coding chr6 159727566 159749421 159727566 159749421 + ENST00000631126.2@WTAP ENST00000631126.2 protein_coding 159727566,159736258,159738990,159742088,159743665,159748191,159748590 159727703,159736295,159739045,159742146,159743792,159748369,159749421 Gene ID= ENSG00000146457.14 TPM= 3.92 Transcript Type= protein_coding chr6 159727588 159749415 159727588 159749415 + ENST00000337387.4@WTAP ENST00000337387.4 protein_coding 159727588,159736258,159738990,159742088,159743665,159748191 159727703,159736295,159739045,159742146,159743792,159749415 Gene ID= ENSG00000146457.14 TPM= 12.98 Transcript Type= protein_coding chr6 159760328 159779055 159760328 159779055 + ENST00000367048.4@ACAT2 ENST00000367048.4 protein_coding 159760328,159762919,159767005,159768511,159775170,159776150,159777302,159778170,159778659 159762142,159763053,159767186,159768628,159775313,159776272,159777456,159778280,159779055 Gene ID= ENSG00000120437.8 TPM= 21.28 Transcript Type= protein_coding chr6 159778498 159789749 159778498 159789749 - ENST00000321394.11@TCP1 ENST00000321394.11 protein_coding 159789405,159788058,159787743,159785900,159785386,159784666,159783941,159780935,159780443,159779895,159779627,159778498 159789749,159788143,159787871,159785997,159785496,159784847,159784067,159781110,159780566,159780087,159779790,159779261 Gene ID= ENSG00000120438.11 TPM= 168.88 Transcript Type= protein_coding chr6 159788907 159798428 159788907 159798428 + transcript4029.chr6.nnic@MRPL18 transcript4029.chr6.nnic protein_coding 159788907,159790940,159797287,159798052 159789604,159791126,159797518,159798428 Gene ID= ENSG00000112110.9 TPM= 2.11 Transcript Type= NA chr6 159789829 159798428 159789829 159798428 + transcript4032.chr6.nnic@MRPL18 transcript4032.chr6.nnic protein_coding 159789829,159790940,159797287,159798052 159790060,159791126,159797518,159798428 Gene ID= ENSG00000112110.9 TPM= 11.17 Transcript Type= NA chr6 159790468 159798428 159790468 159798428 + transcript4035.chr6.nnic@MRPL18 transcript4035.chr6.nnic protein_coding 159790468,159790940,159797287,159798052 159790639,159791126,159797369,159798428 Gene ID= ENSG00000112110.9 TPM= 1.81 Transcript Type= NA chr6 159790466 159798436 159790466 159798436 + ENST00000367034.4@MRPL18 ENST00000367034.4 protein_coding 159790466,159790940,159797287,159798052 159790639,159791126,159797518,159798436 Gene ID= ENSG00000112110.9 TPM= 48.29 Transcript Type= protein_coding chr6 159969036 160090331 159969036 160090331 + transcript4038.chr6.nic@IGF2R transcript4038.chr6.nic protein_coding 159969036,159991184,160009010,160010687,160024572,160027185,160029550,160032551,160032942,160034419,160040560,160043148,160044514,160045745,160046498,160047159,160047792,160048375,160050473,160056424,160058023,160058906,160060547,160061503,160061753,160062532,160063415,160064401,160064804,160068249,160069868,160071910,160072765,160073213,160073757,160075847,160078201,160079580,160080129,160083950,160084995,160088033,160089107,160089916 159969395,159991323,160009134,160010785,160024704,160027314,160029655,160032713,160033107,160034522,160040724,160043288,160044657,160045882,160046645,160047336,160047907,160048543,160050652,160056525,160058124,160059098,160060717,160061646,160061928,160062619,160063630,160064531,160064901,160068385,160070058,160072036,160072884,160073469,160073975,160075996,160078362,160079787,160080275,160084184,160085131,160088147,160089253,160090331 Gene ID= ENSG00000197081.12 TPM= 8.15 Transcript Type= NA chr6 160348316 160452571 160348316 160452571 + transcript4048.chr6.nnic@SLC22A3 transcript4048.chr6.nnic protein_coding 160348316,160397979,160407041,160408753,160410729,160436780,160436997,160442761,160443630,160447719,160450996 160349058,160398082,160407195,160408921,160410846,160436877,160437211,160442869,160443742,160447818,160452571 Gene ID= ENSG00000146477.5 TPM= 2.11 Transcript Type= NA chr6 160348378 160452571 160348378 160452571 + transcript4049.chr6.nnic@SLC22A3 transcript4049.chr6.nnic protein_coding 160348378,160397979,160407041,160408753,160410729,160436997,160442761,160443630,160447719,160450996 160348848,160398082,160407195,160408921,160410846,160437211,160442869,160443742,160447818,160452571 Gene ID= ENSG00000146477.5 TPM= 3.02 Transcript Type= NA chr6 160348378 160452571 160348378 160452571 + transcript4050.chr6.nnic@SLC22A3 transcript4050.chr6.nnic protein_coding 160348378,160397979,160407041,160408753,160410729,160442761,160443630,160447719,160450996 160348848,160398082,160407195,160408921,160410846,160442869,160443742,160447818,160452571 Gene ID= ENSG00000146477.5 TPM= 2.11 Transcript Type= NA chr6 160991727 161117385 160991727 161117385 + ENST00000366919.6@MAP3K4 ENST00000366919.6 protein_coding 160991727,161034259,161048616,161070608,161073466,161080881,161084501,161086379,161086584,161087688,161089322,161091379,161092010,161092978,161093773,161097080,161101892,161102699,161106514,161107899,161108743,161109755,161111836,161112668,161115123,161116850 160992083,161034449,161049979,161070850,161073612,161081038,161084617,161086478,161086667,161087954,161089471,161091540,161092143,161093056,161093851,161097176,161101992,161102779,161106705,161107969,161108859,161109914,161111958,161112774,161115302,161117385 Gene ID= ENSG00000085511.19 TPM= 3.62 Transcript Type= protein_coding chr6 160991784 161117385 160991784 161117385 + ENST00000392142.8@MAP3K4 ENST00000392142.8 protein_coding 160991784,161034259,161048616,161070608,161073466,161080881,161084501,161086379,161086584,161087688,161089322,161091379,161092010,161092978,161093773,161097080,161098278,161101892,161102699,161106514,161107899,161108743,161109755,161111836,161112668,161115123,161116850 160992083,161034449,161049979,161070850,161073612,161081038,161084617,161086478,161086667,161087954,161089471,161091540,161092143,161093056,161093851,161097176,161098427,161101992,161102779,161106705,161107969,161108859,161109914,161111958,161112774,161115302,161117385 Gene ID= ENSG00000085511.19 TPM= 1.81 Transcript Type= protein_coding chr6 161347420 162727771 161347420 162727771 - ENST00000366898.5@PRKN ENST00000366898.5 protein_coding 162727662,162443310,162262525,162201131,162054091,161973302,161785772,161569355,161548854,161386794,161360088,161347420 162727771,162443473,162262765,162201252,162054174,161973417,161785908,161569416,161549003,161386877,161360205,161350211 Gene ID= ENSG00000185345.18 TPM= 21.73 Transcript Type= protein_coding chr6 162727132 163315491 162727132 163315491 + ENST00000337019.7@PACRG ENST00000337019.7 protein_coding 162727132,162728160,162814147,163062150,163089259,163312779,163314827 162727279,162728391,162814281,163062321,163089408,163312895,163315491 Gene ID= ENSG00000112530.11 TPM= 1.81 Transcript Type= protein_coding chr6 163414643 163570145 163414643 163570145 + ENST00000453779.6@QKI ENST00000453779.6 protein_coding 163414643,163455279,163478780,163534982,163561982,163563420,163565946 163415335,163455421,163478896,163535125,163562069,163563719,163570145 Gene ID= ENSG00000112531.16 TPM= 12.68 Transcript Type= protein_coding chr6 165938920 165987970 165938920 165987970 - transcript4077.chr6.nnic@LINC00473 transcript4077.chr6.nnic lincRNA 165987529,165948464,165947064,165938920 165987970,165949914,165947220,165940766 Gene ID= ENSG00000223414.2 TPM= 1.81 Transcript Type= NA chr6 165939456 165988039 165939456 165988039 - ENST00000455853.1@LINC00473 ENST00000455853.1 lincRNA 165987529,165939456 165988039,165940766 Gene ID= ENSG00000223414.2 TPM= 4.53 Transcript Type= lincRNA chr6 166319728 166342591 166319728 166342591 - ENST00000361731.3@SFT2D1 ENST00000361731.3 protein_coding 166342419,166330161,166329507,166328276,166326132,166324537,166322857,166319728 166342591,166330247,166329589,166328357,166326167,166324595,166322886,166320256 Gene ID= ENSG00000198818.9 TPM= 114.1 Transcript Type= protein_coding chr6 166364919 166383013 166364919 166383013 - ENST00000341756.10@MPC1 ENST00000341756.10 protein_coding 166382806,166366795,166365974,166364919 166383013,166366894,166366106,166365453 Gene ID= ENSG00000060762.18 TPM= 56.14 Transcript Type= protein_coding chr6 166409364 166627243 166409364 166627243 - ENST00000265678.8@RPS6KA2 ENST00000265678.8 protein_coding 166626921,166538668,166531232,166510277,166508203,166504506,166500887,166498508,166490671,166488833,166469841,166459449,166451103,166448724,166432401,166430453,166423256,166419882,166418225,166413794,166409364 166627243,166538784,166531313,166510357,166508282,166504612,166500924,166498650,166490741,166488921,166469905,166459551,166451233,166448849,166432490,166430611,166423417,166419958,166418342,166413931,166412887 Gene ID= ENSG00000071242.11 TPM= 52.52 Transcript Type= protein_coding chr6 166929504 166956702 166929504 166956702 - ENST00000508775.5@RNASET2 ENST00000508775.5 protein_coding 166956097,166952488,166948570,166946682,166943019,166938895,166934091,166931044,166929504 166956702,166952548,166948625,166946739,166943089,166939008,166934136,166931118,166929791 Gene ID= ENSG00000026297.15 TPM= 78.78 Transcript Type= protein_coding chr6 166929505 166956611 166929505 166956611 - transcript4098.chr6.nnic@RNASET2 transcript4098.chr6.nnic protein_coding 166956097,166952488,166946682,166943019,166938895,166934091,166931044,166929505 166956611,166952548,166946739,166943089,166939008,166934136,166931118,166929791 Gene ID= ENSG00000026297.15 TPM= 2.72 Transcript Type= NA chr6 166999182 167052713 166999182 167052713 + ENST00000366847.8@FGFR1OP ENST00000366847.8 protein_coding 166999182,167000060,167003193,167003723,167004264,167010813,167013508,167022409,167024782,167026547,167032603,167033875,167039904 166999514,167000113,167003247,167003811,167004401,167010893,167013567,167022635,167024894,167026615,167032642,167033971,167052713 Gene ID= ENSG00000213066.11 TPM= 4.53 Transcript Type= protein_coding chr6 166999408 167040317 166999408 167040317 + ENST00000349556.4@FGFR1OP ENST00000349556.4 protein_coding 166999408,167000060,167003193,167003723,167004264,167010813,167022409,167024782,167026547,167032603,167033875,167039904 166999514,167000113,167003247,167003811,167004401,167010893,167022635,167024894,167026615,167032642,167033971,167040317 Gene ID= ENSG00000213066.11 TPM= 2.72 Transcript Type= protein_coding chr6 167951671 167972020 167951671 167972020 + transcript4111.chr6.nic@AFDN transcript4111.chr6.nic protein_coding 167951671,167962433,167965757,167969114,167969782 167952187,167962567,167966045,167969198,167972020 Gene ID= ENSG00000130396.20 TPM= 2.72 Transcript Type= NA chr6 168306904 168319722 168306904 168319722 - ENST00000366795.3@DACT2 ENST00000366795.3 protein_coding 168319388,168311152,168310168,168306904 168319722,168311284,168310446,168309098 Gene ID= ENSG00000164488.11 TPM= 9.06 Transcript Type= protein_coding chr6 168441151 168667994 168441151 168667994 + ENST00000356284.6@SMOC2 ENST00000356284.6 protein_coding 168441151,168509915,168526346,168527628,168543625,168547119,168549129,168598818,168608157,168650681,168652954,168664074,168666421 168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994 Gene ID= ENSG00000112562.18 TPM= 24.45 Transcript Type= protein_coding chr6 168441151 168667994 168441151 168667994 + ENST00000354536.9@SMOC2 ENST00000354536.9 protein_coding 168441151,168509915,168526346,168527628,168543625,168547086,168549129,168598818,168608157,168650681,168652954,168664074,168666421 168441454,168510086,168526452,168527727,168543672,168547169,168549203,168599004,168608239,168650783,168653228,168664111,168667994 Gene ID= ENSG00000112562.18 TPM= 3.62 Transcript Type= protein_coding chr6 169215780 169254044 169215780 169254044 - ENST00000366787.7@THBS2 ENST00000366787.7 protein_coding 169253990,169253724,169250733,169248417,169246197,169241762,169240452,169239599,169237625,169237170,169234734,169232890,169232664,169231980,169229572,169228122,169226180,169225145,169223248,169222197,169221430,169220198,169215780 169254044,169253896,169250806,169248973,169246281,169241958,169240592,169239695,169237795,169237346,169234907,169233017,169232816,169232198,169229679,169228281,169226298,169225379,169223475,169222468,169221527,169220337,169217829 Gene ID= ENSG00000186340.14 TPM= 21.73 Transcript Type= protein_coding chr6 169707028 169724005 169707028 169724005 - ENST00000612128.1@PHF10 ENST00000612128.1 protein_coding 169723845,169721005,169718788,169717823,169715955,169715708,169714733,169712386,169707028 169724005,169721111,169718918,169717906,169716088,169715857,169714842,169712539,169710391 Gene ID= ENSG00000130024.14 TPM= 25.36 Transcript Type= protein_coding chr6 169751639 169781521 169751639 169781521 + transcript4143.chr6.nic@ERMARD transcript4143.chr6.nic protein_coding 169751639,169753864,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330 169753181,169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781521 Gene ID= ENSG00000130023.15 TPM= 4.53 Transcript Type= NA chr6 169751684 169781521 169751684 169781521 + transcript4145.chr6.nic@ERMARD transcript4145.chr6.nic protein_coding 169751684,169753864,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330 169751937,169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781521 Gene ID= ENSG00000130023.15 TPM= 2.72 Transcript Type= NA chr6 169751625 169781584 169751625 169781584 + ENST00000366773.7@ERMARD ENST00000366773.7 protein_coding 169751625,169753864,169755283,169756338,169756719,169758968,169759838,169760642,169762429,169766638,169768103,169769540,169773319,169775270,169775940,169776455,169779182,169781330 169751663,169754032,169755422,169756439,169756808,169759065,169759974,169760756,169762531,169766667,169768171,169769713,169773402,169775346,169776065,169776673,169779295,169781584 Gene ID= ENSG00000130023.15 TPM= 18.11 Transcript Type= protein_coding chr6 170282202 170291491 170282202 170291491 - transcript4150.chr6.nnic@DLL1 transcript4150.chr6.nnic protein_coding 170291190,170290086,170289512,170288729,170288239,170286238,170285569,170285254,170284919,170283231,170282988,170282202 170291491,170290482,170289808,170288789,170288496,170286298,170285699,170285423,170285135,170284029,170283105,170282879 Gene ID= ENSG00000198719.8 TPM= 5.43 Transcript Type= NA chr6 170282202 170291078 170282202 170291078 - transcript4152.chr6.nic@DLL1 transcript4152.chr6.nic protein_coding 170290086,170289512,170288729,170288239,170285569,170285254,170284919,170283231,170282988,170282202 170291078,170289808,170288789,170288496,170286298,170285423,170285135,170284029,170283105,170282879 Gene ID= ENSG00000198719.8 TPM= 2.72 Transcript Type= NA chr6 170318419 170405077 170318419 170405077 + transcript4159.chr6.nnic@FAM120B transcript4159.chr6.nnic protein_coding 170318419,170318563,170323079,170330449,170348151,170358226,170388287,170391013,170395487,170404550,170404763 170318490,170319124,170323259,170330550,170348323,170358318,170388493,170391121,170395579,170404601,170405077 Gene ID= ENSG00000112584.13 TPM= 2.26 Transcript Type= NA chr6 170306756 170407065 170306756 170407065 + ENST00000476287.3@FAM120B ENST00000476287.3 protein_coding 170306756,170317370,170323079,170330449,170348151,170358226,170388287,170391013,170395487,170404550,170404763 170306842,170319124,170323259,170330550,170348323,170358318,170388493,170391121,170395579,170404601,170407065 Gene ID= ENSG00000112584.13 TPM= 15.85 Transcript Type= protein_coding chr6 170535117 170553341 170535117 170553341 - ENST00000262193.6@PSMB1 ENST00000262193.6 protein_coding 170553130,170549006,170546103,170543601,170537234,170535117 170553341,170549113,170546184,170543730,170537340,170535405 Gene ID= ENSG00000008018.8 TPM= 153.04 Transcript Type= protein_coding chr6 170554333 170572869 170554333 170572869 + ENST00000392092.6@TBP ENST00000392092.6 protein_coding 170554333,170556882,170561791,170564545,170566918,170569612,170571410,170572186 170554463,170557083,170562233,170564632,170567009,170569779,170571504,170572869 Gene ID= ENSG00000112592.13 TPM= 5.89 Transcript Type= protein_coding chr6 170554379 170572870 170554379 170572870 + ENST00000230354.10@TBP ENST00000230354.10 protein_coding 170554379,170556879,170561791,170564545,170566918,170569612,170571410,170572186 170554463,170557083,170562233,170564632,170567009,170569779,170571504,170572870 Gene ID= ENSG00000112592.13 TPM= 4.98 Transcript Type= protein_coding chr6 170577131 170584618 170577131 170584618 - transcript4174.chr6.nnic@PDCD2 transcript4174.chr6.nnic protein_coding 170584497,170584299,170583505,170583057,170580002,170578857,170577131 170584618,170584410,170583747,170583188,170580105,170578970,170577717 Gene ID= ENSG00000071994.10 TPM= 2.72 Transcript Type= NA chr6 170577363 170584646 170577363 170584646 - transcript4175.chr6.nnic@PDCD2 transcript4175.chr6.nnic protein_coding 170584584,170584299,170583505,170583057,170580002,170578857,170577363 170584646,170584411,170583747,170583188,170580105,170578970,170577717 Gene ID= ENSG00000071994.10 TPM= 1.81 Transcript Type= NA chr6 170577363 170584629 170577363 170584629 - transcript4176.chr6.nnic@PDCD2 transcript4176.chr6.nnic protein_coding 170584526,170584299,170583505,170583057,170580002,170578857,170577363 170584629,170584412,170583747,170583188,170580105,170578970,170577717 Gene ID= ENSG00000071994.10 TPM= 1.81 Transcript Type= NA chr6 170581748 170584676 170581748 170584676 - transcript4182.chr6.nnic@PDCD2 transcript4182.chr6.nnic protein_coding 170584497,170584299,170583505,170583057,170581748 170584676,170584410,170583747,170583188,170582265 Gene ID= ENSG00000071994.10 TPM= 1.81 Transcript Type= NA chr6 170578482 170584612 170578482 170584612 - ENST00000542896.5@PDCD2 ENST00000542896.5 protein_coding 170584299,170583505,170583057,170580002,170578857,170578482 170584612,170583747,170583188,170580105,170578970,170578656 Gene ID= ENSG00000071994.10 TPM= 3.62 Transcript Type= protein_coding chr6 170581745 170584615 170581745 170584615 - ENST00000537445.5@PDCD2 ENST00000537445.5 protein_coding 170584492,170584299,170583505,170583057,170581745 170584615,170584392,170583747,170583188,170582265 Gene ID= ENSG00000071994.10 TPM= 2.72 Transcript Type= protein_coding chr6 170581748 170584692 170581748 170584692 - ENST00000614056.4@PDCD2 ENST00000614056.4 protein_coding 170584299,170583505,170583057,170581748 170584692,170583747,170583188,170582265 Gene ID= ENSG00000071994.10 TPM= 6.34 Transcript Type= protein_coding chr7 192969 260745 192969 260745 + ENST00000313766.5@FAM20C ENST00000313766.5 protein_coding 192969,195554,208898,246415,248315,255849,256654,257005,258646,259731 193804,195732,208976,246507,248430,256029,256763,257086,258705,260745 Gene ID= ENSG00000177706.8 TPM= 21.73 Transcript Type= protein_coding chr7 497258 519409 497258 519409 - ENST00000402802.7@PDGFA ENST00000402802.7 protein_coding 518939,517394,512351,510809,501116,497258 519409,517490,512455,510996,501242,498574 Gene ID= ENSG00000197461.13 TPM= 3.62 Transcript Type= protein_coding chr7 521847 525240 521847 525240 + transcript8.chr7.nnic@HRAT92 transcript8.chr7.nnic lincRNA 521847,523195,524080,524365 522703,523316,524280,525240 Gene ID= ENSG00000223855.1 TPM= 1.81 Transcript Type= NA chr7 578420 712472 578420 712472 - transcript20.chr7.nnic@PRKAR1B transcript20.chr7.nnic protein_coding 712414,711329,680556,677229,607391,606193,596146,584508,579256,578420 712472,711527,680726,677320,607452,606239,596304,584568,579377,578853 Gene ID= ENSG00000188191.14 TPM= 3.62 Transcript Type= NA chr7 578420 727296 578420 727296 - transcript21.chr7.nnic@PRKAR1B transcript21.chr7.nnic protein_coding 727210,711329,680556,677229,607391,606193,596146,584508,579256,578420 727296,711527,680726,677320,607452,606239,596304,584568,579377,578853 Gene ID= ENSG00000188191.14 TPM= 1.81 Transcript Type= NA chr7 726647 786474 726647 786474 + transcript16.chr7.nnic@DNAAF5 transcript16.chr7.nnic protein_coding 726647,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,785517 727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,786474 Gene ID= ENSG00000164818.15 TPM= 10.87 Transcript Type= NA chr7 726701 786475 726701 786475 + ENST00000297440.10@DNAAF5 ENST00000297440.10 protein_coding 726701,729663,740819,741347,754589,756782,761753,763806,770471,774048,775006,779953,785517 727315,729847,740943,741465,754821,756994,761896,763974,770618,774198,775162,780144,786475 Gene ID= ENSG00000164818.15 TPM= 62.48 Transcript Type= protein_coding chr7 816584 874908 816584 874908 + transcript29.chr7.nic@SUN1 transcript29.chr7.nic protein_coding 816584,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215 816673,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874908 Gene ID= ENSG00000164828.17 TPM= 73.09 Transcript Type= NA chr7 816584 874908 816584 874908 + transcript35.chr7.nic@SUN1 transcript35.chr7.nic protein_coding 816584,832505,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215 816673,832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874908 Gene ID= ENSG00000164828.17 TPM= 4.17 Transcript Type= NA chr7 816584 874908 816584 874908 + transcript36.chr7.nic@SUN1 transcript36.chr7.nic protein_coding 816584,832505,838798,841946,843206,843341,848418,849520,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215 816673,832601,838986,842130,843232,843520,848615,849603,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874908 Gene ID= ENSG00000164828.17 TPM= 5.17 Transcript Type= NA chr7 816635 874908 816635 874908 + transcript39.chr7.nic@SUN1 transcript39.chr7.nic protein_coding 816635,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215 816673,838986,842130,843232,843520,848615,849603,850033,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874908 Gene ID= ENSG00000164828.17 TPM= 12.31 Transcript Type= NA chr7 832501 874902 832501 874902 + ENST00000401592.5@SUN1 ENST00000401592.5 protein_coding 832501,838798,841946,843206,843341,851384,851950,852609,852810,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215 832601,838986,842130,843232,843520,851482,852043,852667,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902 Gene ID= ENSG00000164828.17 TPM= 4.16 Transcript Type= protein_coding chr7 832501 874902 832501 874902 + ENST00000413171.6@SUN1 ENST00000413171.6 protein_coding 832501,838798,841946,843206,843341,848418,849520,849923,851384,851950,852609,853409,854920,856358,857828,860128,861380,865952,869349,872470,873215 832601,838986,842130,843232,843520,848615,849603,850033,851482,852043,852952,853618,855006,856401,857957,860382,861464,866067,869516,872562,874902 Gene ID= ENSG00000164828.17 TPM= 1.33 Transcript Type= retained_intron chr7 883384 896438 883384 896438 + transcript57.chr7.nic@GET4 transcript57.chr7.nic protein_coding 883384,886056,886569,887370,890928,892278,893740,893899,895334 884394,886134,886650,887519,891066,892418,893815,893971,896438 Gene ID= ENSG00000239857.6 TPM= 5.36 Transcript Type= NA chr7 876553 896441 876553 896441 + transcript60.chr7.nic@GET4 transcript60.chr7.nic protein_coding 876553,886056,886569,887370,890928,892278,893740,895334 876800,886134,886650,887519,891066,892418,893971,896441 Gene ID= ENSG00000239857.6 TPM= 18.34 Transcript Type= NA chr7 876552 896434 876552 896434 + ENST00000265857.7@GET4 ENST00000265857.7 protein_coding 876552,886056,886569,887370,890928,892278,893740,893899,895334 876800,886134,886650,887519,891066,892418,893815,893971,896434 Gene ID= ENSG00000239857.6 TPM= 168.36 Transcript Type= protein_coding chr7 897903 954697 897903 954697 - ENST00000265846.9@ADAP1 ENST00000265846.9 protein_coding 954396,935375,926553,919968,905060,904126,900533,900102,899419,899033,897903 954697,935505,926644,920050,905172,904272,900616,900164,899490,899261,898949 Gene ID= ENSG00000105963.13 TPM= 17.21 Transcript Type= protein_coding chr7 964860 975270 964860 975270 - transcript91.chr7.nic@COX19 transcript91.chr7.nic protein_coding 974907,973181,964860 975270,973292,969456 Gene ID= ENSG00000240230.5 TPM= 9.51 Transcript Type= NA chr7 964860 975288 964860 975288 - transcript92.chr7.nnic@COX19 transcript92.chr7.nnic protein_coding 975004,973181,964860 975288,973292,969456 Gene ID= ENSG00000240230.5 TPM= 2.26 Transcript Type= NA chr7 966075 975599 966075 975599 - ENST00000344111.3@COX19 ENST00000344111.3 protein_coding 975428,973181,966075 975599,973292,969456 Gene ID= ENSG00000240230.5 TPM= 38.03 Transcript Type= protein_coding chr7 977961 986219 977961 986219 - transcript94.chr7.nnic@NA transcript94.chr7.nnic NA 986116,985215,977961 986219,985434,979061 Gene ID= novel_gene_chr7_95 TPM= 1.81 Transcript Type= NA chr7 986328 989640 986328 989640 + transcript74.chr7.nic@CYP2W1 transcript74.chr7.nic protein_coding 986328,987107,987347,988277,988635 986797,987245,987531,988418,989640 Gene ID= ENSG00000073067.13 TPM= 50.1 Transcript Type= NA chr7 986380 989640 986380 989640 + transcript78.chr7.nnic@CYP2W1 transcript78.chr7.nnic protein_coding 986380,987107,987347,988277,988635 986695,987245,987531,988418,989640 Gene ID= ENSG00000073067.13 TPM= 4.83 Transcript Type= NA chr7 986328 989616 986328 989616 + transcript86.chr7.nic@CYP2W1 transcript86.chr7.nic protein_coding 986328,987107,987347,988277 986797,987245,987531,989616 Gene ID= ENSG00000073067.13 TPM= 10.26 Transcript Type= NA chr7 986328 989640 986328 989640 + transcript87.chr7.nic@CYP2W1 transcript87.chr7.nic protein_coding 986328,987107,987347,988635 986797,987245,988418,989640 Gene ID= ENSG00000073067.13 TPM= 6.34 Transcript Type= NA chr7 986391 989640 986391 989640 + transcript88.chr7.nic@CYP2W1 transcript88.chr7.nic protein_coding 986391,987107,988277,988635 986797,987531,988418,989640 Gene ID= ENSG00000073067.13 TPM= 3.92 Transcript Type= NA chr7 986382 989640 986382 989640 + transcript100.chr7.nic@CYP2W1 transcript100.chr7.nic protein_coding 986382,987107,988635 986797,988418,989640 Gene ID= ENSG00000073067.13 TPM= 2.72 Transcript Type= NA chr7 986378 989616 986378 989616 + transcript101.chr7.nic@CYP2W1 transcript101.chr7.nic protein_coding 986378,987347,988277 987245,987531,989616 Gene ID= ENSG00000073067.13 TPM= 3.02 Transcript Type= NA chr7 986450 989631 986450 989631 + transcript106.chr7.nic@CYP2W1 transcript106.chr7.nic protein_coding 986450,987347 987245,989631 Gene ID= ENSG00000073067.13 TPM= 3.02 Transcript Type= NA chr7 996986 1138288 996986 1138288 - transcript112.chr7.nnic@C7orf50 transcript112.chr7.nnic protein_coding 1138209,1127257,1009950,1000470,996986 1138288,1127386,1010143,1000551,997804 Gene ID= ENSG00000146540.14 TPM= 23.7 Transcript Type= NA chr7 1111456 1138288 1111456 1138288 - transcript121.chr7.nnic@C7orf50 transcript121.chr7.nnic protein_coding 1138209,1127257,1111456 1138288,1127386,1112703 Gene ID= ENSG00000146540.14 TPM= 1.81 Transcript Type= NA chr7 997016 1028339 997016 1028339 - ENST00000412051.5@C7orf50 ENST00000412051.5 protein_coding 1028258,1009950,1000470,997016 1028339,1010143,1000551,997804 Gene ID= ENSG00000146540.14 TPM= 23.25 Transcript Type= protein_coding chr7 996986 1138257 996986 1138257 - ENST00000357429.10@C7orf50 ENST00000357429.10 protein_coding 1138189,1127257,1009950,1000470,996986 1138257,1127386,1010143,1000551,997804 Gene ID= ENSG00000146540.14 TPM= 18.26 Transcript Type= protein_coding chr7 1024502 1028352 1024502 1028352 - ENST00000465681.1@C7orf50 ENST00000465681.1 protein_coding 1028258,1024502 1028352,1027027 Gene ID= ENSG00000146540.14 TPM= 1.81 Transcript Type= retained_intron chr7 1055301 1059226 1055301 1059226 + transcript118.chr7.nic@GPR146 transcript118.chr7.nic protein_coding 1055301,1056104,1057492 1055483,1056829,1059226 Gene ID= ENSG00000164849.9 TPM= 1.81 Transcript Type= NA chr7 1055285 1059261 1055285 1059261 + ENST00000397095.2@GPR146 ENST00000397095.2 protein_coding 1055285,1057492 1055483,1059261 Gene ID= ENSG00000164849.9 TPM= 8.15 Transcript Type= protein_coding chr7 1086807 1093815 1086807 1093815 + ENST00000397092.5@GPER1 ENST00000397092.5 protein_coding 1086807,1088198,1091407 1087244,1088321,1093815 Gene ID= ENSG00000164850.14 TPM= 35.02 Transcript Type= protein_coding chr7 1086876 1093815 1086876 1093815 + ENST00000297469.3@GPER1 ENST00000297469.3 protein_coding 1086876,1091407 1087244,1093815 Gene ID= ENSG00000164850.14 TPM= 23.25 Transcript Type= protein_coding chr7 1088087 1093810 1088087 1093810 + ENST00000397088.3@GPER1 ENST00000397088.3 protein_coding 1088087,1091407 1088321,1093810 Gene ID= ENSG00000164850.14 TPM= 32.3 Transcript Type= protein_coding chr7 1152908 1160167 1152908 1160167 - transcript131.chr7.nnic@ZFAND2A transcript131.chr7.nnic protein_coding 1159964,1158158,1156241,1155453,1152908 1160167,1158257,1157750,1156114,1153224 Gene ID= ENSG00000178381.11 TPM= 2.26 Transcript Type= NA chr7 1152907 1160178 1152907 1160178 - ENST00000316495.7@ZFAND2A ENST00000316495.7 protein_coding 1159964,1158158,1157656,1155453,1152907 1160178,1158257,1157750,1155584,1153224 Gene ID= ENSG00000178381.11 TPM= 14.04 Transcript Type= protein_coding chr7 1160334 1165636 1160334 1165636 + transcript134.chr7.nnic@AC091729.3 transcript134.chr7.nnic antisense_RNA 1160334,1162962,1163452,1164161 1160623,1163217,1163495,1165636 Gene ID= ENSG00000229043.2 TPM= 9.06 Transcript Type= NA chr7 1433922 1459509 1433922 1459509 - transcript150.chr7.nic@MICALL2 transcript150.chr7.nic protein_coding 1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1433922 1459509,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147 Gene ID= ENSG00000164877.18 TPM= 25.29 Transcript Type= NA chr7 1434360 1459509 1434360 1459509 - transcript151.chr7.nic@MICALL2 transcript151.chr7.nic protein_coding 1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1434360 1459509,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1434672 Gene ID= ENSG00000164877.18 TPM= 11.17 Transcript Type= NA chr7 1434360 1459509 1434360 1459509 - transcript158.chr7.nnic@MICALL2 transcript158.chr7.nnic protein_coding 1459184,1450240,1448620,1447575,1446713,1444652,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1434360 1459509,1450288,1448761,1447765,1446828,1445428,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147 Gene ID= ENSG00000164877.18 TPM= 7.18 Transcript Type= NA chr7 1434360 1459509 1434360 1459509 - transcript159.chr7.nic@MICALL2 transcript159.chr7.nic protein_coding 1459184,1450240,1448620,1447575,1446713,1444652,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1434360 1459509,1450288,1448761,1447765,1446828,1445428,1442484,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147 Gene ID= ENSG00000164877.18 TPM= 6.88 Transcript Type= NA chr7 1434360 1459509 1434360 1459509 - transcript161.chr7.nic@MICALL2 transcript161.chr7.nic protein_coding 1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1434360 1459509,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856 Gene ID= ENSG00000164877.18 TPM= 6.88 Transcript Type= NA chr7 1434366 1459502 1434366 1459502 - ENST00000297508.7@MICALL2 ENST00000297508.7 protein_coding 1459184,1450240,1448620,1447575,1446713,1444652,1442192,1440591,1439925,1438840,1438289,1438097,1437890,1437535,1436742,1435101,1434366 1459502,1450288,1448761,1447765,1446828,1445428,1442484,1440684,1440085,1438995,1438353,1438220,1437980,1437608,1436856,1435147,1434672 Gene ID= ENSG00000164877.18 TPM= 86.03 Transcript Type= protein_coding chr7 1469908 1504328 1469908 1504328 - transcript181.chr7.nic@INTS1 transcript181.chr7.nic protein_coding 1503903,1502901,1500170,1499884,1499473,1499255,1498975,1498707,1498412,1497138,1496156,1495433,1494816,1493754,1493010,1489591,1489344,1487760,1487320,1486922,1486625,1485290,1485098,1484003,1483742,1482546,1481342,1480835,1480317,1479430,1478726,1478366,1477753,1477550,1476794,1476570,1476229,1475948,1474705,1474168,1473566,1473072,1472273,1471571,1471133,1470846,1469908 1504328,1503191,1500366,1500021,1499632,1499360,1499161,1498852,1498553,1497314,1496264,1495553,1494893,1493911,1493106,1489682,1489404,1487957,1487449,1487101,1486774,1485469,1485202,1484170,1483853,1482707,1481488,1480933,1480441,1479684,1478885,1478506,1477936,1477673,1476918,1476657,1476455,1476071,1474838,1474360,1473693,1473184,1472386,1471641,1471224,1470955,1470692 Gene ID= ENSG00000164880.15 TPM= 3.62 Transcript Type= NA chr7 1470277 1504367 1470277 1504367 - ENST00000404767.7@INTS1 ENST00000404767.7 protein_coding 1504323,1503903,1502901,1500170,1499884,1499473,1499255,1498975,1498707,1498412,1497138,1496156,1495433,1494816,1493754,1493010,1489591,1489344,1487760,1487320,1486922,1486625,1485290,1485098,1484003,1483742,1482546,1481342,1480835,1480317,1479430,1478726,1478366,1477753,1477550,1476794,1476570,1476229,1475948,1474705,1474168,1473566,1473072,1472273,1471571,1471133,1470846,1470277 1504367,1504001,1503191,1500366,1500021,1499632,1499360,1499161,1498852,1498553,1497314,1496264,1495553,1494893,1493911,1493106,1489682,1489404,1487957,1487449,1487101,1486774,1485469,1485202,1484170,1483853,1482707,1481488,1480933,1480441,1479684,1478885,1478506,1477936,1477673,1476918,1476657,1476455,1476071,1474838,1474360,1473693,1473184,1472386,1471641,1471224,1470955,1470692 Gene ID= ENSG00000164880.15 TPM= 91.46 Transcript Type= protein_coding chr7 1530714 1543043 1530714 1543043 + ENST00000343242.8@MAFK ENST00000343242.8 protein_coding 1530714,1539149,1539941 1530898,1539228,1543043 Gene ID= ENSG00000198517.9 TPM= 14.49 Transcript Type= protein_coding chr7 1567330 1569993 1567330 1569993 - ENST00000288607.2@PSMG3 ENST00000288607.2 protein_coding 1569124,1567330 1569993,1567850 Gene ID= ENSG00000157778.8 TPM= 13.58 Transcript Type= protein_coding chr7 1567351 1570045 1567351 1570045 - ENST00000404674.7@PSMG3 ENST00000404674.7 protein_coding 1570009,1569124,1567351 1570045,1569360,1567850 Gene ID= ENSG00000157778.8 TPM= 10.87 Transcript Type= protein_coding chr7 1570125 1581538 1570125 1581538 + transcript194.chr7.nic@PSMG3-AS1 transcript194.chr7.nic lincRNA 1570125,1574715,1575787,1579287 1570279,1574863,1575888,1581538 Gene ID= ENSG00000230487.7 TPM= 1.81 Transcript Type= NA chr7 1570073 1589626 1570073 1589626 + ENST00000437621.6@PSMG3-AS1 ENST00000437621.6 lincRNA 1570073,1574715,1575787,1584384 1570279,1574863,1575888,1589626 Gene ID= ENSG00000230487.7 TPM= 4.53 Transcript Type= lincRNA chr7 1815794 2233243 1815794 2233243 - ENST00000406869.5@MAD1L1 ENST00000406869.5 protein_coding 2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794 2233243,2230724,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228 Gene ID= ENSG00000002822.15 TPM= 47.99 Transcript Type= protein_coding chr7 1815794 2232974 1815794 2232974 - ENST00000399654.6@MAD1L1 ENST00000399654.6 protein_coding 2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,2002065,1980453,1957629,1936687,1898200,1815794 2232974,2230764,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,2002121,1980541,1957719,1936897,1898390,1816228 Gene ID= ENSG00000002822.15 TPM= 7.24 Transcript Type= protein_coding chr7 1815791 2232957 1815791 2232957 - transcript199.chr7.nnic@MAD1L1 transcript199.chr7.nnic protein_coding 2232872,2230549,2229984,2225410,2222575,2219332,2217962,2216157,2215885,2213212,2149152,2069194,2014502,1980453,1957629,1936687,1898200,1815791 2232957,2230724,2230143,2225550,2222754,2219456,2218043,2216287,2215999,2213273,2149238,2069338,2014642,1980541,1957719,1936897,1898390,1816228 Gene ID= ENSG00000002822.15 TPM= 1.81 Transcript Type= NA chr7 1815791 1940568 1815791 1940568 - transcript202.chr7.nic@MAD1L1 transcript202.chr7.nic protein_coding 1940088,1936687,1898200,1815791 1940568,1936897,1898390,1816228 Gene ID= ENSG00000002822.15 TPM= 1.81 Transcript Type= NA chr7 2234196 2242212 2234196 2242212 - transcript205.chr7.nnic@MRM2 transcript205.chr7.nnic protein_coding 2242162,2239418,2234196 2242212,2239676,2235564 Gene ID= ENSG00000122687.17 TPM= 4.53 Transcript Type= NA chr7 2234231 2242169 2234231 2242169 - ENST00000467199.5@MRM2 ENST00000467199.5 protein_coding 2241975,2239418,2234231 2242169,2239707,2235564 Gene ID= ENSG00000122687.17 TPM= 8.6 Transcript Type= processed_transcript chr7 2234291 2242198 2234291 2242198 - ENST00000242257.12@MRM2 ENST00000242257.12 protein_coding 2242162,2239418,2234291 2242198,2239707,2235564 Gene ID= ENSG00000122687.17 TPM= 31.24 Transcript Type= protein_coding chr7 2234295 2242189 2234295 2242189 - ENST00000486040.1@MRM2 ENST00000486040.1 protein_coding 2242162,2239418,2238015,2234295 2242189,2239707,2238937,2235564 Gene ID= ENSG00000122687.17 TPM= 6.34 Transcript Type= processed_transcript chr7 2242222 2251145 2242222 2251145 + ENST00000356714.5@NUDT1 ENST00000356714.5 protein_coding 2242222,2244563,2249857,2250829 2242256,2244726,2250002,2251145 Gene ID= ENSG00000106268.15 TPM= 5.89 Transcript Type= protein_coding chr7 2242259 2251145 2242259 2251145 + ENST00000397046.5@NUDT1 ENST00000397046.5 protein_coding 2242259,2242925,2244563,2249857,2250829 2242292,2242975,2244726,2250002,2251145 Gene ID= ENSG00000106268.15 TPM= 3.17 Transcript Type= protein_coding chr7 2251770 2314464 2251770 2314464 - ENST00000222990.7@SNX8 ENST00000222990.7 protein_coding 2314328,2278100,2275112,2271850,2269559,2264298,2263230,2257735,2257365,2256874,2251770 2314464,2278305,2275229,2271971,2269639,2264458,2263362,2257803,2257514,2257023,2255169 Gene ID= ENSG00000106266.10 TPM= 20.83 Transcript Type= protein_coding chr7 2354796 2380743 2354796 2380743 + transcript214.chr7.nic@EIF3B transcript214.chr7.nic protein_coding 2354796,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204 2355116,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743 Gene ID= ENSG00000106263.17 TPM= 10.27 Transcript Type= NA chr7 2354796 2380742 2354796 2380742 + transcript215.chr7.nic@EIF3B transcript215.chr7.nic protein_coding 2354796,2355234,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279 2355116,2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380742 Gene ID= ENSG00000106263.17 TPM= 11.9 Transcript Type= NA chr7 2354828 2380740 2354828 2380740 + transcript225.chr7.nnic@EIF3B transcript225.chr7.nnic protein_coding 2354828,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380415 2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380740 Gene ID= ENSG00000106263.17 TPM= 7.24 Transcript Type= NA chr7 2354866 2380743 2354866 2380743 + ENST00000360876.8@EIF3B ENST00000360876.8 protein_coding 2354866,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380204 2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380743 Gene ID= ENSG00000106263.17 TPM= 141.57 Transcript Type= protein_coding chr7 2354882 2380745 2354882 2380745 + ENST00000397011.2@EIF3B ENST00000397011.2 protein_coding 2354882,2360710,2362645,2363070,2363632,2364372,2366317,2366525,2366999,2369472,2371777,2372673,2374528,2375389,2376950,2378689,2379134,2379394,2380279 2355420,2360902,2362764,2363127,2363760,2364529,2366448,2366591,2367045,2369682,2371849,2372795,2374606,2375527,2377075,2378766,2379242,2379511,2380745 Gene ID= ENSG00000106263.17 TPM= 117.85 Transcript Type= protein_coding chr7 2403560 2434579 2403560 2434579 + ENST00000618655.1@CHST12 ENST00000618655.1 protein_coding 2403560,2432563 2403673,2434579 Gene ID= ENSG00000136213.9 TPM= 8.15 Transcript Type= protein_coding chr7 2537877 2555727 2537877 2555727 - ENST00000340611.8@BRAT1 ENST00000340611.8 protein_coding 2555487,2554305,2547324,2544909,2543590,2543204,2542120,2541718,2541298,2540979,2539786,2539544,2539179,2537877 2555727,2554447,2547478,2545056,2543962,2543323,2542211,2541836,2541484,2541052,2539888,2539642,2539351,2538764 Gene ID= ENSG00000106009.15 TPM= 293.51 Transcript Type= protein_coding chr7 2558998 2614734 2558998 2614734 + ENST00000402050.6@IQCE ENST00000402050.6 protein_coding 2558998,2567116,2568954,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124,2610044 2559217,2567163,2568999,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607227,2614734 Gene ID= ENSG00000106012.17 TPM= 3.17 Transcript Type= protein_coding chr7 2558972 2614733 2558972 2614733 + ENST00000623361.3@IQCE ENST00000623361.3 protein_coding 2558972,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124,2610044 2559217,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607227,2614733 Gene ID= ENSG00000106012.17 TPM= 3.17 Transcript Type= protein_coding chr7 2559079 2607555 2559079 2607555 + ENST00000476665.5@IQCE ENST00000476665.5 protein_coding 2559079,2567116,2568954,2571526,2572192,2573418,2578242,2578476,2582580,2583637,2584236,2586208,2587822,2589907,2593022,2594886,2598465,2601441,2604881,2605876,2607124 2559217,2567163,2568999,2571654,2572326,2573488,2578355,2578526,2582650,2583709,2584285,2586371,2587877,2590106,2593126,2594976,2598632,2601464,2604991,2605997,2607555 Gene ID= ENSG00000106012.17 TPM= 3.62 Transcript Type= protein_coding chr7 2631951 2664802 2631951 2664802 + ENST00000258796.11@TTYH3 ENST00000258796.11 protein_coding 2631951,2646853,2647142,2647418,2647959,2649567,2649913,2652187,2652918,2656092,2656398,2658286,2658940,2661668 2632278,2647022,2647253,2647638,2648054,2649639,2649988,2652242,2653010,2656184,2656534,2658459,2659015,2664802 Gene ID= ENSG00000136295.14 TPM= 88.74 Transcript Type= protein_coding chr7 2727275 2844343 2727275 2844343 - transcript320.chr7.nnic@GNA12 transcript320.chr7.nnic protein_coding 2843818,2794928,2733451,2727275 2844343,2795143,2733501,2731750 Gene ID= ENSG00000146535.13 TPM= 16.91 Transcript Type= NA chr7 2728112 2844324 2728112 2844324 - ENST00000275364.7@GNA12 ENST00000275364.7 protein_coding 2843853,2794928,2733451,2728112 2844324,2795143,2733501,2731750 Gene ID= ENSG00000146535.13 TPM= 213.86 Transcript Type= protein_coding chr7 4682258 4755053 4682258 4755053 + transcript327.chr7.nic@FOXK1 transcript327.chr7.nic protein_coding 4682258,4740838,4754459 4682868,4741023,4755053 Gene ID= ENSG00000164916.10 TPM= 3.62 Transcript Type= NA chr7 4775572 4791767 4775572 4791767 + transcript345.chr7.nic@AP5Z1 transcript345.chr7.nic protein_coding 4775572,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790673,4791115 4775756,4781312,4781754,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4790591,4790887,4791767 Gene ID= ENSG00000242802.6 TPM= 4.07 Transcript Type= NA chr7 4775622 4791768 4775622 4791768 + ENST00000348624.4@AP5Z1 ENST00000348624.4 protein_coding 4775622,4781175,4781568,4783316,4783689,4784203,4784908,4785415,4785522,4786250,4787634,4788154,4788840,4789832,4790459,4790673,4791115 4775756,4781312,4781754,4783460,4783798,4784371,4785048,4785452,4785684,4786428,4787776,4788294,4788951,4789929,4790591,4790887,4791768 Gene ID= ENSG00000242802.6 TPM= 124.51 Transcript Type= protein_coding chr7 4974031 4998166 4974031 4998166 + transcript355.chr7.nic@RNF216P1 transcript355.chr7.nic transcribed_unprocessed_pseudogene 4974031,4976301,4983671,4984910,4989063,4995475,4996610 4974161,4976436,4983773,4985075,4989177,4995582,4998166 Gene ID= ENSG00000196204.11 TPM= 2.72 Transcript Type= NA chr7 4974037 4998165 4974037 4998165 + ENST00000404006.5@RNF216P1 ENST00000404006.5 transcribed_unprocessed_pseudogene 4974037,4976301,4983671,4984910,4989063,4996610 4974161,4976436,4983773,4985075,4989177,4998165 Gene ID= ENSG00000196204.11 TPM= 2.72 Transcript Type= processed_transcript chr7 5190188 5233826 5190188 5233826 + ENST00000288828.8@WIPI2 ENST00000288828.8 protein_coding 5190188,5193118,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835 5190493,5193171,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5233826 Gene ID= ENSG00000157954.14 TPM= 18.56 Transcript Type= protein_coding chr7 5190196 5231524 5190196 5231524 + ENST00000401525.7@WIPI2 ENST00000401525.7 protein_coding 5190196,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835 5190493,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229738,5231524 Gene ID= ENSG00000157954.14 TPM= 23.54 Transcript Type= protein_coding chr7 5190273 5231470 5190273 5231470 + ENST00000382384.6@WIPI2 ENST00000382384.6 protein_coding 5190273,5199576,5214535,5216563,5217090,5217922,5222602,5225823,5227180,5228104,5229608,5230835 5190493,5199658,5214704,5216659,5217187,5218014,5222672,5225930,5227344,5228211,5229705,5231470 Gene ID= ENSG00000157954.14 TPM= 6.34 Transcript Type= protein_coding chr7 5282969 5304060 5282969 5304060 + ENST00000297195.8@SLC29A4 ENST00000297195.8 protein_coding 5282969,5287806,5290732,5291124,5291693,5294860,5296936,5298988,5299240,5300422,5302797 5283082,5287985,5290863,5291237,5291821,5294934,5297198,5299126,5299427,5300662,5304060 Gene ID= ENSG00000164638.10 TPM= 6.34 Transcript Type= protein_coding chr7 5480558 5513798 5480558 5513798 - ENST00000382368.7@FBXL18 ENST00000382368.7 protein_coding 5513657,5505412,5500488,5491231,5480558 5513798,5505630,5502031,5491449,5481931 Gene ID= ENSG00000155034.18 TPM= 1.81 Transcript Type= protein_coding chr7 5489178 5513802 5489178 5513802 - transcript386.chr7.nic@FBXL18 transcript386.chr7.nic protein_coding 5513657,5505412,5500488,5491231,5489178 5513802,5505630,5502031,5491449,5490212 Gene ID= ENSG00000155034.18 TPM= 2.72 Transcript Type= NA chr7 5527151 5530709 5527151 5530709 - ENST00000331789.9@ACTB ENST00000331789.9 protein_coding 5530524,5529535,5529161,5528281,5528004,5527151 5530709,5529663,5529400,5528719,5528185,5527891 Gene ID= ENSG00000075624.13 TPM= 3887.13 Transcript Type= protein_coding chr7 5527156 5530601 5527156 5530601 - ENST00000462494.5@ACTB ENST00000462494.5 protein_coding 5530524,5529535,5528281,5528004,5527156 5530601,5529663,5529400,5528185,5527891 Gene ID= ENSG00000075624.13 TPM= 68.14 Transcript Type= retained_intron chr7 5592823 5606655 5592823 5606655 + ENST00000382361.7@FSCN1 ENST00000382361.7 protein_coding 5592823,5603257,5603496,5603863,5605272 5593768,5603413,5603617,5604030,5606655 Gene ID= ENSG00000075618.17 TPM= 218.54 Transcript Type= protein_coding chr7 5620047 5781696 5620047 5781696 - ENST00000425013.6@RNF216 ENST00000425013.6 protein_coding 5781541,5761003,5752846,5740973,5739276,5730715,5729432,5725324,5721033,5716716,5715053,5712715,5711761,5652413,5641154,5624056,5620047 5781696,5761138,5752979,5741644,5739352,5730817,5729596,5725438,5721172,5716766,5715190,5712863,5711839,5652510,5641376,5624125,5623179 Gene ID= ENSG00000011275.18 TPM= 27.17 Transcript Type= protein_coding chr7 5823151 5854434 5823151 5854434 + transcript429.chr7.nnic@ZNF815P transcript429.chr7.nnic transcribed_unprocessed_pseudogene 5823151,5833527,5839949,5840690,5846766,5848564,5854107 5823526,5833568,5840075,5840856,5847411,5849516,5854434 Gene ID= ENSG00000235944.8 TPM= 1.81 Transcript Type= NA chr7 5898759 5925978 5898759 5925978 + transcript438.chr7.nnic@CCZ1 transcript438.chr7.nnic protein_coding 5898759,5900284,5900473,5900855,5901657,5902661,5905094,5910035,5918867,5919849,5923387,5923835,5925632 5898919,5900381,5900566,5900932,5901704,5902744,5905269,5910116,5918900,5919966,5923545,5923962,5925978 Gene ID= ENSG00000122674.11 TPM= 3.92 Transcript Type= NA chr7 5898734 5925974 5898734 5925974 + ENST00000325974.8@CCZ1 ENST00000325974.8 protein_coding 5898734,5900284,5900473,5900855,5901657,5902661,5905094,5910035,5911861,5912843,5918867,5919849,5923387,5923835,5925632 5898919,5900381,5900566,5900932,5901704,5902744,5905269,5910116,5911922,5912954,5918900,5919966,5923545,5923962,5925974 Gene ID= ENSG00000122674.11 TPM= 155.6 Transcript Type= protein_coding chr7 5973239 6009125 5973239 6009125 - ENST00000265849.11@PMS2 ENST00000265849.11 protein_coding 6008997,6005892,6003972,6003690,6002453,5999108,5997326,5995534,5991973,5989800,5986759,5982824,5978596,5977588,5973239 6009125,6006031,6004058,6003792,6002636,5999275,5997423,5995633,5992057,5989955,5987620,5982991,5978696,5977757,5973542 Gene ID= ENSG00000122512.14 TPM= 2.72 Transcript Type= protein_coding chr7 6009245 6023834 6009245 6023834 + ENST00000223029.7@AIMP2 ENST00000223029.7 protein_coding 6009245,6015146,6017814,6023303 6009498,6015352,6018045,6023834 Gene ID= ENSG00000106305.9 TPM= 28.07 Transcript Type= protein_coding chr7 6022244 6059230 6022244 6059230 - ENST00000199389.10@EIF2AK1 ENST00000199389.10 protein_coding 6058966,6054546,6049912,6048807,6046992,6046071,6044562,6042933,6040892,6038560,6037424,6028918,6028615,6026728,6022244 6059230,6054704,6050045,6048844,6047091,6046151,6044661,6042993,6041219,6038671,6037524,6029032,6028697,6026961,6024801 Gene ID= ENSG00000086232.12 TPM= 214.91 Transcript Type= protein_coding chr7 6161776 6272644 6161776 6272644 - ENST00000350796.7@CYTH3 ENST00000350796.7 protein_coding 6272474,6190449,6187657,6187050,6177823,6173653,6171202,6170830,6170535,6165734,6165545,6165273,6161776 6272644,6190531,6187721,6187116,6177941,6173733,6171314,6170978,6170646,6165810,6165616,6165427,6165016 Gene ID= ENSG00000008256.15 TPM= 36.22 Transcript Type= protein_coding chr7 6374523 6403977 6374523 6403977 + ENST00000348035.8@RAC1 ENST00000348035.8 protein_coding 6374523,6387212,6391924,6400126,6401868,6402316 6374770,6387283,6392041,6400188,6402027,6403977 Gene ID= ENSG00000136238.17 TPM= 326 Transcript Type= protein_coding chr7 6409117 6448462 6409117 6448462 - transcript476.chr7.nnic@DAGLB transcript476.chr7.nnic protein_coding 6447748,6445953,6436362,6434762,6432837,6430480,6425988,6424752,6421727,6416841,6416668,6412966,6412811,6410130,6409117 6448462,6446104,6436533,6435020,6432959,6430607,6426114,6424835,6421804,6416921,6416754,6413034,6412883,6410380,6410035 Gene ID= ENSG00000164535.14 TPM= 3.62 Transcript Type= NA chr7 6409117 6448546 6409117 6448546 - transcript478.chr7.nnic@DAGLB transcript478.chr7.nnic protein_coding 6447748,6445953,6436362,6434762,6432837,6430480,6425988,6424752,6416841,6416627,6412966,6412811,6410130,6409117 6448546,6446104,6436533,6435020,6432959,6430607,6426114,6424835,6416921,6416754,6413034,6412883,6410380,6410035 Gene ID= ENSG00000164535.14 TPM= 5.13 Transcript Type= NA chr7 6409117 6448462 6409117 6448462 - transcript481.chr7.nnic@DAGLB transcript481.chr7.nnic protein_coding 6447748,6445953,6436362,6434762,6432837,6430480,6425988,6416841,6416627,6412966,6412811,6410130,6409117 6448462,6446104,6436533,6435020,6432959,6430607,6426114,6416921,6416754,6413034,6412883,6410380,6410035 Gene ID= ENSG00000164535.14 TPM= 5.13 Transcript Type= NA chr7 6409129 6448012 6409129 6448012 - ENST00000297056.10@DAGLB ENST00000297056.10 protein_coding 6447748,6445953,6436362,6434762,6432837,6430480,6425988,6424752,6421727,6416841,6416627,6412966,6412811,6410130,6409129 6448012,6446104,6436533,6435020,6432959,6430607,6426114,6424835,6421804,6416921,6416754,6413034,6412883,6410380,6410035 Gene ID= ENSG00000164535.14 TPM= 44.98 Transcript Type= protein_coding chr7 6461081 6484242 6461081 6484242 - ENST00000258739.8@KDELR2 ENST00000258739.8 protein_coding 6483967,6474184,6469596,6466071,6461081 6484242,6474284,6469754,6466323,6463175 Gene ID= ENSG00000136240.9 TPM= 324.19 Transcript Type= protein_coding chr7 6577453 6588926 6577453 6588926 + ENST00000335965.10@ZDHHC4 ENST00000335965.10 protein_coding 6577453,6578566,6580555,6581607,6582073,6583306,6585016,6588617 6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588926 Gene ID= ENSG00000136247.14 TPM= 29.88 Transcript Type= protein_coding chr7 6577434 6588978 6577434 6588978 + ENST00000396707.6@ZDHHC4 ENST00000396707.6 protein_coding 6577434,6577590,6578566,6580555,6581607,6582073,6583306,6585016,6588617 6577498,6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978 Gene ID= ENSG00000136247.14 TPM= 17.21 Transcript Type= protein_coding chr7 6577434 6588931 6577434 6588931 + ENST00000405731.7@ZDHHC4 ENST00000405731.7 protein_coding 6577434,6578501,6580555,6581607,6582073,6583306,6585016,6588617 6577498,6578720,6580678,6581680,6582251,6583431,6585260,6588931 Gene ID= ENSG00000136247.14 TPM= 2.72 Transcript Type= protein_coding chr7 6577434 6588978 6577434 6588978 + ENST00000396713.6@ZDHHC4 ENST00000396713.6 protein_coding 6577434,6578566,6580555,6581607,6582073,6583306,6585016,6588617 6577720,6578720,6580678,6581680,6582251,6583431,6585260,6588978 Gene ID= ENSG00000136247.14 TPM= 18.11 Transcript Type= protein_coding chr7 6589996 6608775 6589996 6608775 + transcript494.chr7.nnic@C7orf26 transcript494.chr7.nnic protein_coding 6589996,6591753,6594435,6599829,6602101,6607960 6590475,6591867,6594600,6600356,6602140,6608775 Gene ID= ENSG00000146576.12 TPM= 3.17 Transcript Type= NA chr7 6590017 6608726 6590017 6608726 + ENST00000344417.9@C7orf26 ENST00000344417.9 protein_coding 6590017,6591646,6594435,6599829,6602101,6607960 6590475,6591867,6594600,6600356,6602140,6608726 Gene ID= ENSG00000146576.12 TPM= 31.24 Transcript Type= protein_coding chr7 6615617 6624290 6615617 6624290 + ENST00000457543.3@ZNF853 ENST00000457543.3 protein_coding 6615617,6617190,6621122 6616186,6617307,6624290 Gene ID= ENSG00000236609.3 TPM= 15.39 Transcript Type= protein_coding chr7 6637333 6656431 6637333 6656431 + transcript502.chr7.nnic@ZNF316 transcript502.chr7.nnic protein_coding 6637333,6637966,6639042,6641825,6642382,6642964,6643822,6644480,6652303 6637447,6638009,6639141,6641962,6642764,6643073,6643948,6644593,6656431 Gene ID= ENSG00000205903.6 TPM= 1.81 Transcript Type= NA chr7 6637296 6656431 6637296 6656431 + transcript503.chr7.nic@ZNF316 transcript503.chr7.nic protein_coding 6637296,6637846,6639042,6641825,6642964,6643822,6644480,6652303 6637447,6638009,6639141,6642764,6643073,6643948,6644593,6656431 Gene ID= ENSG00000205903.6 TPM= 1.81 Transcript Type= NA chr7 6637322 6656432 6637322 6656432 + ENST00000382252.5@ZNF316 ENST00000382252.5 protein_coding 6637322,6637846,6639042,6641825,6642382,6642964,6643822,6644480,6652303 6637447,6638009,6639141,6641962,6642764,6643073,6643948,6644593,6656432 Gene ID= ENSG00000205903.6 TPM= 37.13 Transcript Type= protein_coding chr7 6688433 6706923 6688433 6706923 - ENST00000405858.5@ZNF12 ENST00000405858.5 protein_coding 6706432,6705159,6697685,6697339,6688433 6706923,6705223,6697811,6697434,6692703 Gene ID= ENSG00000164631.18 TPM= 28.07 Transcript Type= protein_coding chr7 6729799 6753863 6729799 6753863 + transcript506.chr7.nic@PMS2CL transcript506.chr7.nic transcribed_unprocessed_pseudogene 6729799,6731897,6733399,6735305,6737076,6741685,6746088,6747036,6751249 6730301,6731955,6733527,6735389,6737936,6741852,6746188,6747205,6753863 Gene ID= ENSG00000187953.10 TPM= 7.24 Transcript Type= NA chr7 6798361 6826770 6798361 6826770 - ENST00000316731.12@CCZ1B ENST00000316731.12 protein_coding 6826078,6824640,6824455,6824089,6823313,6822281,6819766,6814764,6812976,6811952,6806004,6804938,6801365,6800948,6798361 6826770,6824737,6824548,6824166,6823360,6822364,6819941,6814845,6813037,6812063,6806037,6805055,6801523,6801075,6799279 Gene ID= ENSG00000146574.15 TPM= 75.61 Transcript Type= protein_coding chr7 6798934 6826183 6798934 6826183 - transcript517.chr7.nnic@CCZ1B transcript517.chr7.nnic protein_coding 6826078,6824089,6823313,6822281,6819766,6814764,6812976,6811952,6801365,6800948,6798934 6826183,6824737,6823360,6822364,6819941,6814845,6813037,6812063,6801523,6801075,6799279 Gene ID= ENSG00000146574.15 TPM= 2.26 Transcript Type= NA chr7 7566849 7607472 7566849 7607472 + transcript525.chr7.nic@MIOS transcript525.chr7.nic protein_coding 7566849,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996 7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607472 Gene ID= ENSG00000164654.15 TPM= 2.87 Transcript Type= NA chr7 7566884 7609137 7566884 7609137 + transcript528.chr7.nnic@MIOS transcript528.chr7.nnic protein_coding 7566884,7567607,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996 7567072,7567688,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7609137 Gene ID= ENSG00000164654.15 TPM= 2.87 Transcript Type= NA chr7 7567043 7607472 7567043 7607472 + transcript531.chr7.nnic@MIOS transcript531.chr7.nnic protein_coding 7567043,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996 7567371,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607472 Gene ID= ENSG00000164654.15 TPM= 1.97 Transcript Type= NA chr7 7566892 7607501 7566892 7607501 + transcript533.chr7.nnic@MIOS transcript533.chr7.nnic protein_coding 7566892,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996 7567688,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607501 Gene ID= ENSG00000164654.15 TPM= 1.97 Transcript Type= NA chr7 7566893 7607472 7566893 7607472 + transcript534.chr7.nic@MIOS transcript534.chr7.nic protein_coding 7566893,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996 7567072,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607472 Gene ID= ENSG00000164654.15 TPM= 6.49 Transcript Type= NA chr7 7566872 7607496 7566872 7607496 + ENST00000340080.8@MIOS ENST00000340080.8 protein_coding 7566872,7567607,7568026,7572436,7574098,7583118,7585636,7588498,7589405,7594980,7596257,7605942,7606996 7567072,7567688,7568123,7573769,7574196,7583372,7585805,7588563,7589563,7595132,7596461,7606071,7607496 Gene ID= ENSG00000164654.15 TPM= 5.59 Transcript Type= protein_coding chr7 7635186 7640978 7635186 7640978 - transcript539.chr7.nic@RPA3 transcript539.chr7.nic protein_coding 7640320,7639070,7637864,7635186 7640978,7639144,7637972,7637082 Gene ID= ENSG00000106399.11 TPM= 47.99 Transcript Type= NA chr7 7640678 7879218 7640678 7879218 + transcript542.chr7.nic@UMAD1 transcript542.chr7.nic protein_coding 7640678,7673309,7801670,7877281 7640821,7673453,7801743,7879218 Gene ID= ENSG00000219545.11 TPM= 28.07 Transcript Type= NA chr7 7640678 7748408 7640678 7748408 + transcript545.chr7.nnic@UMAD1 transcript545.chr7.nnic protein_coding 7640678,7673309,7747994 7640821,7673453,7748408 Gene ID= ENSG00000219545.11 TPM= 1.81 Transcript Type= NA chr7 7640776 7879185 7640776 7879185 + ENST00000636849.1@UMAD1 ENST00000636849.1 protein_coding 7640776,7673322,7801670,7877281 7640821,7673453,7801743,7879185 Gene ID= ENSG00000219545.11 TPM= 27.17 Transcript Type= protein_coding chr7 7968794 8089080 7968794 8089080 + ENST00000223145.9@GLCCI1 ENST00000223145.9 protein_coding 7968794,8003908,8022483,8055433,8060096,8070921,8084897,8086193 7969807,8004059,8022569,8055549,8060248,8071131,8085017,8089080 Gene ID= ENSG00000106415.12 TPM= 8.15 Transcript Type= protein_coding chr7 8113184 8262281 8113184 8262281 - ENST00000402384.7@ICA1 ENST00000402384.7 protein_coding 8262094,8235910,8232590,8228601,8221275,8218305,8158527,8157116,8143875,8141765,8138985,8138840,8127873,8113184 8262281,8236005,8232755,8228673,8221398,8218503,8158652,8157214,8143972,8141817,8139047,8138881,8128142,8114044 Gene ID= ENSG00000003147.17 TPM= 3.62 Transcript Type= protein_coding chr7 10931951 10940256 10931951 10940256 - ENST00000339600.5@NDUFA4 ENST00000339600.5 protein_coding 10940016,10938808,10938090,10931951 10940256,10938896,10938147,10933692 Gene ID= ENSG00000189043.9 TPM= 419.27 Transcript Type= protein_coding chr7 10973904 11169630 10973904 11169630 + ENST00000634607.1@PHF14 ENST00000634607.1 protein_coding 10973904,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416 10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169630 Gene ID= ENSG00000106443.15 TPM= 19.92 Transcript Type= protein_coding chr7 10973889 11169623 10973889 11169623 + ENST00000423760.6@PHF14 ENST00000423760.6 protein_coding 10973889,10974835,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11111350,11169416 10974324,10974945,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11111467,11169623 Gene ID= ENSG00000106443.15 TPM= 9.96 Transcript Type= nonsense_mediated_decay chr7 10973872 11103655 10973872 11103655 + ENST00000403050.7@PHF14 ENST00000403050.7 protein_coding 10973872,10974835,10982372,10990703,11013747,11022868,11028681,11035640,11036418,11036985,11038760,11040672,11042683,11051612,11061791,11061964,11102486 10974324,10974945,10983159,10990847,11013906,11022979,11028818,11035786,11036688,11037091,11038855,11040775,11042814,11051780,11061841,11062085,11103655 Gene ID= ENSG00000106443.15 TPM= 2.72 Transcript Type= protein_coding chr7 12211327 12237263 12211327 12237263 + transcript568.chr7.nic@TMEM106B transcript568.chr7.nic protein_coding 12211327,12214809,12218458,12224226,12229679,12230389,12231062,12231837 12211547,12215027,12218521,12224385,12229819,12230438,12231115,12237263 Gene ID= ENSG00000106460.18 TPM= 9.96 Transcript Type= NA chr7 12211241 12233089 12211241 12233089 + ENST00000396668.7@TMEM106B ENST00000396668.7 protein_coding 12211241,12214809,12218458,12224226,12229679,12230389,12231062,12231837 12211425,12215027,12218521,12224385,12229819,12230438,12231115,12233089 Gene ID= ENSG00000106460.18 TPM= 61.58 Transcript Type= protein_coding chr7 12570686 12660179 12570686 12660179 + ENST00000297029.9@SCIN ENST00000297029.9 protein_coding 12570686,12578064,12581060,12604514,12622801,12625010,12625762,12626584,12629101,12636045,12640347,12644138,12644584,12649467,12651841,12652588 12570985,12578218,12581221,12604663,12622893,12625142,12625850,12626799,12629222,12636135,12640517,12644315,12644705,12649544,12651901,12660179 Gene ID= ENSG00000006747.14 TPM= 1.81 Transcript Type= protein_coding chr7 12687286 12690934 12687286 12690934 + ENST00000396663.2@ARL4A ENST00000396663.2 protein_coding 12687286,12688166 12687728,12690934 Gene ID= ENSG00000122644.12 TPM= 3.62 Transcript Type= protein_coding chr7 13891228 13989946 13891228 13989946 - ENST00000430479.5@ETV1 ENST00000430479.5 protein_coding 13989563,13989268,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13891228 13989946,13989464,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087 Gene ID= ENSG00000006468.13 TPM= 3.17 Transcript Type= protein_coding chr7 13893271 13991435 13893271 13991435 - transcript581.chr7.nic@ETV1 transcript581.chr7.nic protein_coding 13991328,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893271 13991435,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087 Gene ID= ENSG00000006468.13 TPM= 3.98 Transcript Type= NA chr7 13900370 13989669 13900370 13989669 - transcript582.chr7.nic@ETV1 transcript582.chr7.nic protein_coding 13989563,13989268,13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900370 13989669,13989464,13989139,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839 Gene ID= ENSG00000006468.13 TPM= 1.81 Transcript Type= NA chr7 13893271 13988898 13893271 13988898 - transcript585.chr7.nnic@ETV1 transcript585.chr7.nnic protein_coding 13988814,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893271 13988898,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087 Gene ID= ENSG00000006468.13 TPM= 5.34 Transcript Type= NA chr7 13893105 13990053 13893105 13990053 - transcript586.chr7.nic@ETV1 transcript586.chr7.nic protein_coding 13989008,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893105 13990053,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087 Gene ID= ENSG00000006468.13 TPM= 7.61 Transcript Type= NA chr7 13893271 13988564 13893271 13988564 - transcript588.chr7.nic@ETV1 transcript588.chr7.nic protein_coding 13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893271 13988564,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087 Gene ID= ENSG00000006468.13 TPM= 2.63 Transcript Type= NA chr7 13893268 13988873 13893268 13988873 - ENST00000405358.8@ETV1 ENST00000405358.8 protein_coding 13988680,13988086,13986638,13977427,13939117,13935708,13931502,13911239,13909632,13906430,13900738,13893268 13988873,13988173,13986685,13977480,13939246,13935896,13931749,13911307,13909700,13906599,13900839,13896087 Gene ID= ENSG00000006468.13 TPM= 5.34 Transcript Type= protein_coding chr7 16599776 16645817 16599776 16645817 - ENST00000306999.6@ANKMY2 ENST00000306999.6 protein_coding 16645507,16636391,16627040,16624983,16615744,16610549,16609630,16604721,16602380,16599776 16645817,16636455,16627178,16625081,16615904,16610763,16609765,16604849,16602509,16600945 Gene ID= ENSG00000106524.8 TPM= 31.69 Transcript Type= protein_coding chr7 16646131 16706523 16646131 16706523 + ENST00000258761.7@BZW2 ENST00000258761.7 protein_coding 16646131,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060 16646288,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706523 Gene ID= ENSG00000136261.14 TPM= 34.41 Transcript Type= protein_coding chr7 16646134 16706512 16646134 16706512 + ENST00000433922.6@BZW2 ENST00000433922.6 protein_coding 16646134,16665437,16674412,16681301,16682780,16685905,16689797,16694834,16696915,16698048,16704547,16706060 16646304,16665501,16674588,16681404,16682845,16686040,16689906,16695004,16697061,16698186,16704669,16706512 Gene ID= ENSG00000136261.14 TPM= 7.24 Transcript Type= protein_coding chr7 17286275 17299357 17286275 17299357 - ENST00000433005.1@AC003075.1 ENST00000433005.1 antisense_RNA 17299060,17286275 17299357,17286516 Gene ID= ENSG00000237773.5 TPM= 1.81 Transcript Type= antisense_RNA chr7 17298654 17345768 17298654 17345768 + transcript610.chr7.nnic@AHR transcript610.chr7.nnic protein_coding 17298654,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921,17345626 17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17343552,17345768 Gene ID= ENSG00000106546.12 TPM= 1.81 Transcript Type= NA chr7 17298582 17346127 17298582 17346127 + transcript612.chr7.nnic@AHR transcript612.chr7.nnic protein_coding 17298582,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921,17345178 17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17344776,17346127 Gene ID= ENSG00000106546.12 TPM= 11.77 Transcript Type= NA chr7 17298622 17346150 17298622 17346150 + ENST00000242057.8@AHR ENST00000242057.8 protein_coding 17298622,17309936,17322501,17327759,17329952,17330756,17333912,17334887,17335645,17338986,17342921 17299329,17310123,17322607,17327848,17330075,17330886,17334114,17334996,17335786,17340228,17346150 Gene ID= ENSG00000106546.12 TPM= 11.77 Transcript Type= protein_coding chr7 17790748 17940508 17790748 17940508 - transcript621.chr7.nic@SNX13 transcript621.chr7.nic protein_coding 17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17790748 17940508,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821681,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292 Gene ID= ENSG00000071189.21 TPM= 9.81 Transcript Type= NA chr7 17790748 17940508 17790748 17940508 - transcript625.chr7.nnic@SNX13 transcript625.chr7.nnic protein_coding 17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17801588,17799009,17798690,17796827,17790748 17940508,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821648,17816289,17814944,17801659,17799154,17798758,17796939,17794292 Gene ID= ENSG00000071189.21 TPM= 3.02 Transcript Type= NA chr7 17790761 17940494 17790761 17940494 - ENST00000428135.7@SNX13 ENST00000428135.7 protein_coding 17940284,17897334,17893332,17891546,17890363,17875669,17875480,17873528,17868407,17850826,17850347,17845595,17839807,17834761,17834052,17830010,17826022,17821509,17816182,17814834,17803419,17801588,17799009,17798690,17796827,17790761 17940494,17897446,17893434,17891635,17890484,17875790,17875581,17873616,17868490,17850964,17850435,17845694,17840000,17834865,17834184,17830047,17826091,17821648,17816289,17814944,17803580,17801659,17799154,17798758,17796939,17794292 Gene ID= ENSG00000071189.21 TPM= 39.69 Transcript Type= protein_coding chr7 18290092 18327744 18290092 18327744 + transcript631.chr7.nic@HDAC9 transcript631.chr7.nic protein_coding 18290092,18325512,18327449 18290515,18325592,18327744 Gene ID= ENSG00000048052.21 TPM= 1.81 Transcript Type= NA chr7 19695462 19709087 19695462 19709087 - ENST00000222567.5@TWISTNB ENST00000222567.5 protein_coding 19708763,19704779,19700072,19695462 19709087,19704920,19700280,19698727 Gene ID= ENSG00000105849.5 TPM= 19.92 Transcript Type= protein_coding chr7 21542816 21570843 21542816 21570843 + transcript649.chr7.nic@DNAH11 transcript649.chr7.nic protein_coding 21542816,21545006,21558802,21559603,21561071,21564186,21570069 21543596,21545149,21558998,21559792,21561170,21564397,21570843 Gene ID= ENSG00000105877.17 TPM= 1.81 Transcript Type= NA chr7 21851129 21902236 21851129 21902236 + transcript651.chr7.nic@DNAH11 transcript651.chr7.nic protein_coding 21851129,21852467,21854315,21861853,21864535,21866470,21867859,21868864,21873274,21880702,21884291,21892425,21894623,21894884,21899336,21899980,21901007 21851320,21852631,21854455,21862023,21864657,21866663,21868007,21868991,21873501,21880893,21884410,21892667,21894805,21894999,21899448,21900120,21902236 Gene ID= ENSG00000105877.17 TPM= 21.28 Transcript Type= NA chr7 21851129 21902236 21851129 21902236 + transcript654.chr7.nnic@DNAH11 transcript654.chr7.nnic protein_coding 21851129,21852552,21854315,21861853,21864535,21866470,21867859,21868864,21873274,21880702,21884291,21892425,21894623,21894884,21899336,21899980,21901007 21851320,21852631,21854455,21862023,21864657,21866663,21868007,21868991,21873501,21880893,21884410,21892667,21894805,21894999,21899448,21900120,21902236 Gene ID= ENSG00000105877.17 TPM= 3.17 Transcript Type= NA chr7 21900901 21946084 21900901 21946084 - ENST00000406877.7@CDCA7L ENST00000406877.7 protein_coding 21945781,21916754,21911617,21908130,21906568,21906289,21905506,21904110,21902978,21900901 21946084,21916894,21911754,21908507,21906639,21906456,21905631,21904259,21903114,21902352 Gene ID= ENSG00000164649.19 TPM= 3.62 Transcript Type= protein_coding chr7 22812628 22822849 22812628 22822849 - ENST00000463284.2@TOMM7 ENST00000463284.2 protein_coding 22822677,22812628 22822849,22813185 Gene ID= ENSG00000196683.10 TPM= 4.07 Transcript Type= processed_transcript chr7 22812632 22822851 22812632 22822851 - ENST00000358435.8@TOMM7 ENST00000358435.8 protein_coding 22822677,22818000,22812632 22822851,22818048,22813185 Gene ID= ENSG00000196683.10 TPM= 242.23 Transcript Type= protein_coding chr7 23105758 23175302 23105758 23175302 + ENST00000521082.5@KLHL7 ENST00000521082.5 protein_coding 23105758,23117834,23123777,23124688,23125048,23140769,23143851,23152067,23165698,23167836,23172948,23174015 23106146,23117964,23123879,23124781,23125172,23140944,23144025,23152209,23165938,23168037,23173045,23175302 Gene ID= ENSG00000122550.17 TPM= 6.79 Transcript Type= nonsense_mediated_decay chr7 23181827 23201009 23181827 23201009 + ENST00000258742.9@NUPL2 ENST00000258742.9 protein_coding 23181827,23185070,23187052,23195839,23196680,23199458,23200168 23182206,23185298,23187146,23195915,23196766,23199542,23201009 Gene ID= ENSG00000136243.16 TPM= 16.3 Transcript Type= protein_coding chr7 23246773 23275110 23246773 23275110 + transcript693.chr7.nnic@GPNMB transcript693.chr7.nnic protein_coding 23246773,23253307,23254169,23256892,23259980,23260456,23261482,23266517,23267886,23269967,23273521,23274065 23246927,23253459,23254312,23257065,23260138,23260773,23261565,23266615,23267988,23270175,23273614,23275110 Gene ID= ENSG00000136235.15 TPM= 1.81 Transcript Type= NA chr7 23246697 23275107 23246697 23275107 + ENST00000381990.6@GPNMB ENST00000381990.6 protein_coding 23246697,23253307,23254169,23256892,23259980,23260456,23266481,23267886,23269967,23273521,23274065 23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275107 Gene ID= ENSG00000136235.15 TPM= 9.06 Transcript Type= protein_coding chr7 23246563 23275108 23246563 23275108 + ENST00000258733.8@GPNMB ENST00000258733.8 protein_coding 23246563,23253307,23254169,23256892,23259980,23260456,23266517,23267886,23269967,23273521,23274065 23246927,23253459,23254312,23257065,23260138,23260773,23266615,23267988,23270175,23273614,23275108 Gene ID= ENSG00000136235.15 TPM= 31.69 Transcript Type= protein_coding chr7 23299200 23311729 23299200 23311729 + ENST00000466681.1@MALSU1 ENST00000466681.1 protein_coding 23299200,23300839,23307868,23309356 23299608,23301017,23307949,23311729 Gene ID= ENSG00000156928.4 TPM= 43.47 Transcript Type= protein_coding chr7 23504784 23532041 23504784 23532041 - ENST00000538367.5@TRA2A ENST00000538367.5 protein_coding 23531789,23522132,23521707,23516363,23512894,23507420,23506138,23505746,23504784 23532041,23522432,23521840,23516528,23513082,23507535,23506266,23505813,23505569 Gene ID= ENSG00000164548.10 TPM= 6.79 Transcript Type= protein_coding chr7 23504780 23532041 23504780 23532041 - ENST00000297071.8@TRA2A ENST00000297071.8 protein_coding 23531789,23521707,23516363,23512894,23507420,23506138,23505746,23504780 23532041,23521840,23516528,23513082,23507535,23506266,23505813,23505569 Gene ID= ENSG00000164548.10 TPM= 33.96 Transcript Type= protein_coding chr7 23597379 23630718 23597379 23630718 + transcript703.chr7.nnic@CCDC126 transcript703.chr7.nnic protein_coding 23597379,23597967,23604086,23611171,23622066,23629871 23597605,23598051,23604279,23611553,23622227,23630718 Gene ID= ENSG00000169193.11 TPM= 1.81 Transcript Type= NA chr7 23597379 23644708 23597379 23644708 + ENST00000307471.7@CCDC126 ENST00000307471.7 protein_coding 23597379,23597967,23611171,23642931 23597605,23598051,23611553,23644708 Gene ID= ENSG00000169193.11 TPM= 9.96 Transcript Type= protein_coding chr7 24284163 24291865 24284163 24291865 + ENST00000242152.6@NPY ENST00000242152.6 protein_coding 24284163,24285241,24289499,24291663 24284275,24285428,24289579,24291865 Gene ID= ENSG00000122585.7 TPM= 1.81 Transcript Type= protein_coding chr7 25120091 25125361 25120091 25125361 - ENST00000305786.6@CYCS ENST00000305786.6 protein_coding 25125200,25123951,25120091 25125361,25124127,25123849 Gene ID= ENSG00000172115.8 TPM= 89.65 Transcript Type= protein_coding chr7 25134697 25180411 25134697 25180411 - transcript718.chr7.nic@C7orf31 transcript718.chr7.nic protein_coding 25179971,25179175,25168289,25161189,25158501,25155011,25151596,25142640,25142241,25134697 25180411,25179332,25168465,25161260,25158530,25155192,25151684,25142814,25142332,25136793 Gene ID= ENSG00000153790.11 TPM= 12.38 Transcript Type= NA chr7 25134697 25180354 25134697 25180354 - ENST00000409280.5@C7orf31 ENST00000409280.5 protein_coding 25180070,25179175,25168289,25161189,25158501,25155011,25151596,25142640,25142241,25134697 25180354,25179332,25168465,25161260,25158530,25155192,25151684,25142814,25142332,25136793 Gene ID= ENSG00000153790.11 TPM= 1.51 Transcript Type= protein_coding chr7 25135735 25180300 25135735 25180300 - ENST00000283905.7@C7orf31 ENST00000283905.7 protein_coding 25179662,25179175,25168289,25161189,25158501,25155011,25151596,25142640,25142241,25135735 25180300,25179332,25168465,25161260,25158530,25155192,25151684,25142814,25142332,25136793 Gene ID= ENSG00000153790.11 TPM= 5.13 Transcript Type= protein_coding chr7 26189928 26201613 26189928 26201613 - transcript723.chr7.nic@HNRNPA2B1 transcript723.chr7.nic protein_coding 26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26189928 26201613,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460 Gene ID= ENSG00000122566.20 TPM= 35.32 Transcript Type= NA chr7 26189937 26200775 26189937 26200775 - transcript728.chr7.nnic@HNRNPA2B1 transcript728.chr7.nnic protein_coding 26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26191056,26189937 26200775,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460 Gene ID= ENSG00000122566.20 TPM= 9.06 Transcript Type= NA chr7 26189704 26200776 26189704 26200776 - transcript730.chr7.nic@HNRNPA2B1 transcript730.chr7.nic protein_coding 26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26190993,26189704 26200776,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26190460 Gene ID= ENSG00000122566.20 TPM= 14.94 Transcript Type= NA chr7 26189928 26200790 26189928 26200790 - transcript731.chr7.nnic@HNRNPA2B1 transcript731.chr7.nnic protein_coding 26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26189928 26200790,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26190460 Gene ID= ENSG00000122566.20 TPM= 9.06 Transcript Type= NA chr7 26190125 26200746 26190125 26200746 - ENST00000360787.8@HNRNPA2B1 ENST00000360787.8 protein_coding 26200572,26197831,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26190993,26190125 26200746,26197866,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26191128,26190460 Gene ID= ENSG00000122566.20 TPM= 9.96 Transcript Type= nonsense_mediated_decay chr7 26191844 26200746 26191844 26200746 - ENST00000356674.7@HNRNPA2B1 ENST00000356674.7 protein_coding 26200572,26197622,26197315,26196807,26196557,26196401,26195847,26193575,26193251,26192495,26191844 26200746,26197732,26197461,26197017,26196658,26196481,26195909,26193694,26193373,26192577,26192338 Gene ID= ENSG00000122566.20 TPM= 308.79 Transcript Type= protein_coding chr7 26201693 26213351 26201693 26213351 + ENST00000396386.6@CBX3 ENST00000396386.6 protein_coding 26201693,26202971,26206368,26208393,26211662,26212082 26201826,26203022,26206510,26208555,26211756,26213351 Gene ID= ENSG00000122565.18 TPM= 170.24 Transcript Type= protein_coding chr7 26201765 26213356 26201765 26213356 + ENST00000409747.5@CBX3 ENST00000409747.5 protein_coding 26201765,26202971,26206368,26208466,26211662,26212082 26201826,26203022,26206510,26208555,26211756,26213356 Gene ID= ENSG00000122565.18 TPM= 5.43 Transcript Type= protein_coding chr7 26291982 26374317 26291982 26374317 + transcript740.chr7.nic@SNX10 transcript740.chr7.nic protein_coding 26291982,26346420,26357007,26360975,26364535,26365047,26371821,26372491 26292086,26346466,26357127,26361061,26364635,26365145,26372033,26374317 Gene ID= ENSG00000086300.15 TPM= 3.32 Transcript Type= NA chr7 26291923 26374325 26291923 26374325 + ENST00000338523.8@SNX10 ENST00000338523.8 protein_coding 26291923,26346420,26360975,26364535,26365047,26371821,26372491 26292086,26346466,26361061,26364635,26365145,26372033,26374325 Gene ID= ENSG00000086300.15 TPM= 80.29 Transcript Type= protein_coding chr7 26293054 26374329 26293054 26374329 + ENST00000396376.5@SNX10 ENST00000396376.5 protein_coding 26293054,26346420,26360975,26364535,26365047,26371821,26372491 26293158,26346466,26361061,26364635,26365145,26372033,26374329 Gene ID= ENSG00000086300.15 TPM= 3.32 Transcript Type= protein_coding chr7 27141052 27143668 27141052 27143668 - ENST00000222726.3@HOXA5 ENST00000222726.3 protein_coding 27143046,27141052 27143668,27142085 Gene ID= ENSG00000106004.4 TPM= 31.69 Transcript Type= protein_coding chr7 27141052 27151006 27141052 27151006 - transcript768.chr7.nnic@HOXA6 transcript768.chr7.nnic protein_coding 27150308,27147308,27143046,27141052 27151006,27147422,27145917,27142085 Gene ID= ENSG00000106006.6 TPM= 15.85 Transcript Type= NA chr7 27141052 27151008 27141052 27151008 - transcript769.chr7.nic@HOXA6 transcript769.chr7.nic protein_coding 27150308,27147308,27143046,27141052 27151008,27147569,27145917,27142085 Gene ID= ENSG00000106006.6 TPM= 13.13 Transcript Type= NA chr7 27153716 27156677 27153716 27156677 - ENST00000242159.4@HOXA7 ENST00000242159.4 protein_coding 27156167,27153716 27156677,27155222 Gene ID= ENSG00000122592.7 TPM= 20.83 Transcript Type= protein_coding chr7 27170591 27174306 27170591 27174306 - ENST00000283921.4@HOXA10 ENST00000283921.4 protein_coding 27173349,27170591 27174306,27172173 Gene ID= ENSG00000253293.4 TPM= 30.79 Transcript Type= protein_coding chr7 27181515 27185216 27181515 27185216 - ENST00000006015.3@HOXA11 ENST00000006015.3 protein_coding 27184436,27181515 27185216,27183028 Gene ID= ENSG00000005073.5 TPM= 1.81 Transcript Type= protein_coding chr7 27242700 27247825 27242700 27247825 + ENST00000496902.6@EVX1 ENST00000496902.6 protein_coding 27242700,27245048,27245886 27243457,27245304,27247825 Gene ID= ENSG00000106038.12 TPM= 3.62 Transcript Type= protein_coding chr7 27525442 27662995 27525442 27662995 - ENST00000265395.6@HIBADH ENST00000265395.6 protein_coding 27662698,27649473,27632336,27629371,27542967,27538341,27531192,27525442 27662995,27649633,27632445,27629492,27543100,27538417,27531348,27526372 Gene ID= ENSG00000106049.8 TPM= 297.92 Transcript Type= protein_coding chr7 27525475 27662868 27525475 27662868 - ENST00000428288.2@HIBADH ENST00000428288.2 protein_coding 27662698,27632336,27629371,27542967,27538341,27531192,27525475 27662868,27632445,27629492,27543100,27538417,27531348,27526372 Gene ID= ENSG00000106049.8 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr7 27740116 27829765 27740116 27829765 + transcript814.chr7.nnic@TAX1BP1 transcript814.chr7.nnic protein_coding 27740116,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27827738,27828628 27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27827820,27829765 Gene ID= ENSG00000106052.13 TPM= 24.14 Transcript Type= NA chr7 27740095 27828881 27740095 27828881 + ENST00000265393.10@TAX1BP1 ENST00000265393.10 protein_coding 27740095,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628 27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816394,27817038,27827820,27828881 Gene ID= ENSG00000106052.13 TPM= 73.05 Transcript Type= protein_coding chr7 27740189 27829263 27740189 27829263 + ENST00000396319.6@TAX1BP1 ENST00000396319.6 protein_coding 27740189,27748518,27758031,27765834,27769676,27785163,27785399,27787418,27792006,27793066,27794323,27796116,27799965,27816349,27816890,27827738,27828628 27740269,27748686,27758133,27766021,27769834,27785311,27785489,27787603,27792230,27793212,27794446,27796219,27800090,27816520,27817038,27827820,27829263 Gene ID= ENSG00000106052.13 TPM= 81.9 Transcript Type= protein_coding chr7 27830573 28180743 27830573 28180743 - ENST00000283928.9@JAZF1 ENST00000283928.9 protein_coding 28180463,27991909,27895220,27840698,27830573 28180743,27991981,27895416,27840867,27832976 Gene ID= ENSG00000153814.11 TPM= 33.51 Transcript Type= protein_coding chr7 28995258 29146537 28995258 29146537 - transcript827.chr7.nic@CPVL transcript827.chr7.nic protein_coding 29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29030577,28995258 29146537,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29030759,28995882 Gene ID= ENSG00000106066.14 TPM= 3.32 Transcript Type= NA chr7 28995231 29146537 28995231 29146537 - ENST00000265394.9@CPVL ENST00000265394.9 protein_coding 29146429,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995231 29146537,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882 Gene ID= ENSG00000106066.14 TPM= 47.24 Transcript Type= protein_coding chr7 28995631 29146497 28995631 29146497 - ENST00000396276.7@CPVL ENST00000396276.7 protein_coding 29146341,29120893,29112704,29096103,29095084,29092623,29086484,29072301,29071773,29066023,29064061,29030577,28995631 29146497,29121071,29112822,29096217,29095142,29092702,29086550,29072423,29071904,29066121,29064234,29030759,28995882 Gene ID= ENSG00000106066.14 TPM= 2.87 Transcript Type= protein_coding chr7 29194412 29514328 29194412 29514328 + ENST00000222792.10@CHN2 ENST00000222792.10 protein_coding 29194412,29354625,29367932,29393679,29398373,29400543,29480279,29495952,29499867,29504744,29507228,29509301,29512564 29194990,29354663,29367987,29393710,29398486,29400828,29480356,29496036,29500040,29504821,29507365,29509406,29514328 Gene ID= ENSG00000106069.21 TPM= 5.89 Transcript Type= protein_coding chr7 29479712 29514328 29479712 29514328 + ENST00000412711.6@CHN2 ENST00000412711.6 protein_coding 29479712,29495952,29499867,29504744,29507228,29509301,29512564 29480356,29496036,29500040,29504821,29507365,29509406,29514328 Gene ID= ENSG00000106069.21 TPM= 6.79 Transcript Type= protein_coding chr7 29685154 29688243 29685154 29688243 + ENST00000602980.1@DPY19L2P3 ENST00000602980.1 transcribed_unprocessed_pseudogene 29685154,29687279 29685865,29688243 Gene ID= ENSG00000227855.3 TPM= 2.72 Transcript Type= processed_transcript chr7 29920103 29989798 29920103 29989798 - ENST00000242059.9@SCRN1 ENST00000242059.9 protein_coding 29989642,29968909,29955179,29943977,29940682,29936556,29926452,29920103 29989798,29969068,29955360,29944179,29940876,29936721,29926632,29924115 Gene ID= ENSG00000136193.16 TPM= 62.48 Transcript Type= protein_coding chr7 30010587 30026684 30010587 30026684 - ENST00000222803.9@FKBP14 ENST00000222803.9 protein_coding 30026312,30022665,30018996,30010587 30026684,30022816,30019123,30014893 Gene ID= ENSG00000106080.10 TPM= 3.62 Transcript Type= protein_coding chr7 30134810 30162762 30134810 30162762 + ENST00000324453.12@MTURN ENST00000324453.12 protein_coding 30134810,30146177,30157438 30135298,30146299,30162762 Gene ID= ENSG00000180354.15 TPM= 6.34 Transcript Type= protein_coding chr7 30496621 30504829 30496621 30504829 - ENST00000440082.5@GGCT ENST00000440082.5 protein_coding 30504569,30498803,30496621 30504829,30498938,30497235 Gene ID= ENSG00000006625.17 TPM= 10.26 Transcript Type= nonsense_mediated_decay chr7 30496621 30504844 30496621 30504844 - ENST00000275428.8@GGCT ENST00000275428.8 protein_coding 30504569,30500536,30498803,30496621 30504844,30500681,30498938,30497235 Gene ID= ENSG00000006625.17 TPM= 23.84 Transcript Type= protein_coding chr7 30496623 30504841 30496623 30504841 - ENST00000005374.10@GGCT ENST00000005374.10 protein_coding 30504569,30500536,30496623 30504841,30500681,30497235 Gene ID= ENSG00000006625.17 TPM= 1.2 Transcript Type= protein_coding chr7 30594832 30634043 30594832 30634043 + transcript880.chr7.nic@GARS transcript880.chr7.nic protein_coding 30594832,30595824,30598796,30599947,30601059,30603034,30603496,30609585,30612096,30615896,30617114,30621393,30622317,30626234,30628560,30631448,30632247,30633735 30595143,30595933,30598897,30600049,30601200,30603122,30603572,30609730,30612245,30616058,30617278,30621500,30622462,30626319,30628669,30631541,30632437,30634043 Gene ID= ENSG00000106105.13 TPM= 5.43 Transcript Type= NA chr7 30594878 30634043 30594878 30634043 + transcript883.chr7.nnic@GARS transcript883.chr7.nnic protein_coding 30594878,30598796,30599947,30601059,30603034,30603496,30609585,30612096,30615896,30617114,30621393,30622317,30626234,30631480,30632247,30633735 30595143,30598897,30600049,30601200,30603122,30603572,30609730,30612245,30616058,30617278,30621500,30622462,30626310,30631541,30632437,30634043 Gene ID= ENSG00000106105.13 TPM= 2.72 Transcript Type= NA chr7 30752101 30757608 30752101 30757608 + transcript891.chr7.nnic@INMT transcript891.chr7.nnic protein_coding 30752101,30753731,30755422,30757539 30752304,30753938,30756221,30757608 Gene ID= ENSG00000241644.2 TPM= 3.8 Transcript Type= NA chr7 30752101 30757602 30752101 30757602 + transcript892.chr7.nnic@INMT transcript892.chr7.nnic protein_coding 30752101,30753731,30755422,30756453 30752304,30753938,30756280,30757602 Gene ID= ENSG00000241644.2 TPM= 5.16 Transcript Type= NA chr7 30752101 30757602 30752101 30757602 + transcript893.chr7.nnic@INMT transcript893.chr7.nnic protein_coding 30752101,30753731,30755422,30756535 30752304,30753938,30756362,30757602 Gene ID= ENSG00000241644.2 TPM= 5.16 Transcript Type= NA chr7 30752101 30892386 30752101 30892386 + transcript885.chr7.nic@INMT-MINDY4 transcript885.chr7.nic protein_coding 30752101,30753731,30778432,30781977,30785749,30791165,30828679,30836658,30839200,30840760,30850454,30852216,30853394,30859257,30872243,30875495,30882181,30882921,30891957 30752304,30753938,30778551,30782212,30785992,30791574,30828737,30836764,30839316,30840848,30850555,30852279,30853459,30859324,30872306,30875656,30882361,30882993,30892386 Gene ID= ENSG00000254959.6 TPM= 1.81 Transcript Type= NA chr7 30771417 30892387 30771417 30892387 + ENST00000265299.6@MINDY4 ENST00000265299.6 protein_coding 30771417,30778432,30781977,30785749,30791165,30828679,30836658,30839200,30840760,30850454,30852216,30853394,30859257,30872243,30875495,30882181,30882921,30891957 30771556,30778551,30782212,30785992,30791574,30828737,30836764,30839316,30840848,30850555,30852279,30853459,30859324,30872306,30875656,30882361,30882993,30892387 Gene ID= ENSG00000106125.14 TPM= 1.81 Transcript Type= protein_coding chr7 30911694 30925516 30911694 30925516 + ENST00000311813.9@AQP1 ENST00000311813.9 protein_coding 30911694,30922066,30922564,30923450 30912293,30922230,30922644,30925516 Gene ID= ENSG00000240583.11 TPM= 54.33 Transcript Type= protein_coding chr7 32485332 32490418 32485332 32490418 - ENST00000450169.6@LSM5 ENST00000450169.6 protein_coding 32490320,32489249,32488625,32487685,32485332 32490418,32489344,32488652,32487757,32487293 Gene ID= ENSG00000106355.9 TPM= 38.03 Transcript Type= protein_coding chr7 32495489 32588721 32495489 32588721 + ENST00000318709.8@AVL9 ENST00000318709.8 protein_coding 32495489,32543141,32544694,32548847,32551334,32552229,32553727,32554558,32558559,32558929,32570020,32573199,32575955,32580219,32580802,32583792 32495802,32543261,32544779,32548918,32551423,32552295,32553767,32554596,32558628,32559464,32570154,32573418,32576072,32580272,32580890,32588721 Gene ID= ENSG00000105778.18 TPM= 9.51 Transcript Type= protein_coding chr7 32495486 32584172 32495486 32584172 + transcript906.chr7.nnic@AVL9 transcript906.chr7.nnic protein_coding 32495486,32543141,32544694,32548847,32551334,32552229,32553727,32554558,32558559,32559223,32570020,32573199,32575955,32580219,32580802,32583792 32495802,32543261,32544779,32548918,32551423,32552295,32553767,32554596,32558628,32559464,32570154,32573418,32576072,32580272,32580890,32584172 Gene ID= ENSG00000105778.18 TPM= 3.17 Transcript Type= NA chr7 32728034 32756058 32728034 32756058 - transcript907.chr7.nnic@DPY19L1P1 transcript907.chr7.nnic unprocessed_pseudogene 32753206,32751394,32728034 32756058,32751473,32729009 Gene ID= ENSG00000229358.3 TPM= 8.15 Transcript Type= NA chr7 32868172 32891897 32868172 32891897 - ENST00000304056.8@KBTBD2 ENST00000304056.8 protein_coding 32891536,32879435,32874992,32868172 32891897,32879942,32875157,32870880 Gene ID= ENSG00000170852.10 TPM= 9.96 Transcript Type= protein_coding chr7 32868169 32891895 32868169 32891895 - transcript910.chr7.nic@KBTBD2 transcript910.chr7.nic protein_coding 32891536,32879701,32874992,32868169 32891895,32879942,32875157,32870880 Gene ID= ENSG00000170852.10 TPM= 2.72 Transcript Type= NA chr7 32916817 32943207 32916817 32943207 - transcript914.chr7.nic@RP9P transcript914.chr7.nic transcribed_unprocessed_pseudogene 32942870,32930078,32921339,32918311,32916817 32943207,32930108,32921430,32918372,32917542 Gene ID= ENSG00000205763.13 TPM= 1.81 Transcript Type= NA chr7 32916815 32943176 32916815 32943176 - ENST00000381639.3@RP9P ENST00000381639.3 transcribed_unprocessed_pseudogene 32942870,32933814,32930078,32921339,32918311,32916815 32943176,32933896,32930108,32921430,32918372,32917542 Gene ID= ENSG00000205763.13 TPM= 11.77 Transcript Type= processed_transcript chr7 32957404 33006930 32957404 33006930 + ENST00000538336.5@FKBP9 ENST00000538336.5 protein_coding 32957404,32963544,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175 32957794,32963702,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006930 Gene ID= ENSG00000122642.10 TPM= 5.43 Transcript Type= protein_coding chr7 32957405 33006931 32957405 33006931 + ENST00000242209.8@FKBP9 ENST00000242209.8 protein_coding 32957405,32974617,32975182,32976354,32980364,32988507,32996163,33000115,33002676,33005175 32957794,32974762,32975371,32976499,32980553,32988652,32996349,33000260,33002839,33006931 Gene ID= ENSG00000122642.10 TPM= 233.02 Transcript Type= protein_coding chr7 33014114 33062820 33014114 33062820 - transcript940.chr7.nic@NT5C3A transcript940.chr7.nic protein_coding 33062568,33035934,33026817,33024039,33022053,33021272,33019635,33015670,33014114 33062820,33035988,33026915,33024108,33022099,33021357,33019724,33017601,33014831 Gene ID= ENSG00000122643.18 TPM= 1.81 Transcript Type= NA chr7 33094797 33109390 33094797 33109390 - ENST00000297157.7@RP9 ENST00000297157.7 protein_coding 33109221,33100531,33099307,33097271,33096493,33094797 33109390,33100561,33099436,33097362,33096554,33095432 Gene ID= ENSG00000164610.8 TPM= 18.11 Transcript Type= protein_coding chr7 33129263 33605626 33129263 33605626 + transcript943.chr7.nic@BBS9 transcript943.chr7.nic protein_coding 33129263,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33351219,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865,33605195 33129552,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33351323,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33604975,33605626 Gene ID= ENSG00000122507.20 TPM= 5.43 Transcript Type= NA chr7 33129561 33605777 33129561 33605777 + transcript945.chr7.nic@BBS9 transcript945.chr7.nic protein_coding 33129561,33146242,33152701,33155638,33177478,33257236,33264290,33273012,33273827,33336441,33340897,33344581,33349068,33351219,33352859,33357855,33367767,33383666,33387992,33505463,33533954,33604865 33130041,33146364,33152851,33155702,33177591,33257410,33264374,33273195,33273956,33336622,33340973,33344634,33349170,33351323,33352873,33357995,33367862,33383838,33388144,33505645,33534176,33605777 Gene ID= ENSG00000122507.20 TPM= 3.62 Transcript Type= NA chr7 34928876 35037458 34928876 35037458 - transcript948.chr7.nnic@DPY19L1 transcript948.chr7.nnic protein_coding 35037097,35018572,35017882,35013568,35011330,35010468,34989884,34989355,34973514,34969433,34966894,34957984,34955308,34954698,34949797,34947630,34945667,34942615,34941765,34940153,34939276,34937994,34928876 35037458,35018596,35017969,35013705,35011450,35010561,34989941,34989447,34973605,34969532,34966971,34958070,34955367,34954778,34949898,34947701,34945716,34942639,34941884,34940327,34939375,34938119,34931729 Gene ID= ENSG00000173852.14 TPM= 3.62 Transcript Type= NA chr7 34928876 35037525 34928876 35037525 - ENST00000638088.1@DPY19L1 ENST00000638088.1 protein_coding 35037097,35018572,35017882,35013568,35011330,35010468,34989884,34973514,34969433,34966894,34957984,34955308,34954698,34949797,34947630,34945667,34942615,34941765,34940153,34939276,34937994,34928876 35037525,35018596,35017969,35013705,35011450,35010561,34989941,34973605,34969532,34966971,34958070,34955367,34954778,34949898,34947701,34945716,34942639,34941884,34940327,34939375,34938119,34931729 Gene ID= ENSG00000173852.14 TPM= 28.98 Transcript Type= protein_coding chr7 35632662 35695187 35632662 35695187 - transcript959.chr7.nic@HERPUD2 transcript959.chr7.nic protein_coding 35694801,35694184,35667434,35638350,35635135,35634312,35632662 35695187,35694627,35667588,35638472,35635458,35634429,35633851 Gene ID= ENSG00000122557.9 TPM= 3.17 Transcript Type= NA chr7 35632659 35695135 35632659 35695135 - ENST00000396081.5@HERPUD2 ENST00000396081.5 protein_coding 35694184,35673201,35670215,35667434,35638350,35635135,35634312,35632659 35695135,35673278,35670328,35667588,35638472,35635458,35634429,35633851 Gene ID= ENSG00000122557.9 TPM= 8.6 Transcript Type= protein_coding chr7 35800932 35907105 35800932 35907105 + ENST00000399034.7@SEPT7 ENST00000399034.7 protein_coding 35800932,35832798,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898248,35903076,35904254 35801270,35832900,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35907105 Gene ID= ENSG00000122545.18 TPM= 146.63 Transcript Type= protein_coding chr7 35801213 35905305 35801213 35905305 + transcript974.chr7.nic@SEPT7 transcript974.chr7.nic protein_coding 35801213,35832798,35863552,35872666,35873641,35879823,35882484,35883891,35885828,35890668,35898215,35903076,35904254 35801270,35832900,35863658,35872766,35873775,35879940,35882576,35883987,35885879,35890793,35898383,35903215,35905305 Gene ID= ENSG00000122545.18 TPM= 7.77 Transcript Type= NA chr7 36324106 36367201 36324106 36367201 - transcript979.chr7.nic@KIAA0895 transcript979.chr7.nic protein_coding 36366704,36356902,36336154,36335046,36333856,36330982,36324106 36367201,36357590,36336297,36335178,36334161,36331079,36326918 Gene ID= ENSG00000164542.12 TPM= 2.72 Transcript Type= NA chr7 36324224 36367199 36324224 36367199 - transcript983.chr7.nic@KIAA0895 transcript983.chr7.nic protein_coding 36366916,36336154,36335046,36333856,36330982,36324224 36367199,36336297,36335178,36334161,36331079,36326918 Gene ID= ENSG00000164542.12 TPM= 2.72 Transcript Type= NA chr7 36324224 36367204 36324224 36367204 - transcript988.chr7.nic@KIAA0895 transcript988.chr7.nic protein_coding 36366916,36335046,36333856,36330982,36324224 36367204,36335178,36334161,36331079,36326918 Gene ID= ENSG00000164542.12 TPM= 2.72 Transcript Type= NA chr7 36324221 36367283 36324221 36367283 - transcript989.chr7.nic@KIAA0895 transcript989.chr7.nic protein_coding 36367111,36335046,36333856,36330982,36324221 36367283,36335178,36334161,36331079,36326918 Gene ID= ENSG00000164542.12 TPM= 3.62 Transcript Type= NA chr7 36324230 36367241 36324230 36367241 - ENST00000317020.10@KIAA0895 ENST00000317020.10 protein_coding 36366916,36356902,36335046,36333856,36330982,36324230 36367241,36357590,36335178,36334161,36331079,36326918 Gene ID= ENSG00000164542.12 TPM= 1.81 Transcript Type= protein_coding chr7 36854361 37449249 36854361 37449249 - ENST00000310758.8@ELMO1 ENST00000310758.8 protein_coding 37448675,37342613,37315920,37314850,37271832,37259181,37244356,37233095,37224879,37222615,37216645,37213335,37211386,37133130,37096619,37013299,36894854,36887560,36878010,36870393,36861659,36854361 37449249,37342763,37315960,37314922,37271882,37259350,37244391,37233194,37225030,37222693,37216695,37213457,37211517,37133234,37096727,37013435,36895017,36887672,36878117,36870475,36861736,36855751 Gene ID= ENSG00000155849.15 TPM= 8.15 Transcript Type= protein_coding chr7 37905932 37916915 37905932 37916915 - ENST00000436072.6@SFRP4 ENST00000436072.6 protein_coding 37916093,37914373,37914213,37912119,37909617,37905932 37916915,37914453,37914278,37912317,37909680,37907664 Gene ID= ENSG00000106483.11 TPM= 26.26 Transcript Type= protein_coding chr7 37920561 37951941 37920561 37951941 + ENST00000199448.8@EPDR1 ENST00000199448.8 protein_coding 37920561,37948840,37950200 37921208,37949048,37951941 Gene ID= ENSG00000086289.11 TPM= 220.05 Transcript Type= protein_coding chr7 38178248 38230670 38178248 38230670 + transcript1013.chr7.nic@STARD3NL transcript1013.chr7.nic protein_coding 38178248,38201714,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923 38178420,38201966,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230670 Gene ID= ENSG00000010270.13 TPM= 1.81 Transcript Type= NA chr7 38178222 38230671 38178222 38230671 + ENST00000009041.11@STARD3NL ENST00000009041.11 protein_coding 38178222,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923 38178420,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230671 Gene ID= ENSG00000010270.13 TPM= 28.98 Transcript Type= protein_coding chr7 38178351 38230381 38178351 38230381 + ENST00000396013.5@STARD3NL ENST00000396013.5 protein_coding 38178351,38179090,38207447,38214357,38215028,38217025,38217188,38219565,38228799,38229923 38178420,38179145,38207729,38214434,38215105,38217078,38217305,38219660,38228871,38230381 Gene ID= ENSG00000010270.13 TPM= 1.81 Transcript Type= protein_coding chr7 38722963 38909229 38722963 38909229 - ENST00000310301.8@VPS41 ENST00000310301.8 protein_coding 38909154,38898091,38869146,38862545,38830254,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38722963 38909229,38898129,38869253,38862622,38830328,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326 Gene ID= ENSG00000006715.15 TPM= 38.49 Transcript Type= protein_coding chr7 38725554 38909191 38725554 38909191 - transcript1024.chr7.nic@VPS41 transcript1024.chr7.nic protein_coding 38909154,38869146,38862545,38830254,38821203,38817817,38796745,38795465,38789801,38776679,38774115,38772522,38771198,38767537,38765580,38763455,38758354,38756838,38754895,38754702,38752176,38745559,38743402,38741985,38728692,38728542,38726909,38725554 38909191,38869253,38862622,38830328,38821265,38817882,38796864,38795611,38789867,38776776,38774244,38772637,38771254,38767598,38765661,38763547,38758481,38756982,38754936,38754752,38752313,38745613,38743542,38742121,38728791,38728586,38726988,38726326 Gene ID= ENSG00000006715.15 TPM= 3.17 Transcript Type= NA chr7 39566376 39572881 39566376 39572881 + ENST00000223273.6@YAE1D1 ENST00000223273.6 protein_coding 39566376,39570506,39572277 39566547,39570627,39572881 Gene ID= ENSG00000241127.7 TPM= 9.96 Transcript Type= protein_coding chr7 39949767 40049177 39949767 40049177 + transcript1037.chr7.nic@CDK13 transcript1037.chr7.nic protein_coding 39949767,39987599,39997494,39999361,40001861,40045836,40047821 39951852,39988258,39997664,39999500,40002031,40046025,40049177 Gene ID= ENSG00000065883.14 TPM= 2.72 Transcript Type= NA chr7 39949653 39999027 39949653 39999027 + transcript1038.chr7.nic@CDK13 transcript1038.chr7.nic protein_coding 39949653,39987599,39997494 39951852,39988258,39999027 Gene ID= ENSG00000065883.14 TPM= 9.06 Transcript Type= NA chr7 39950037 40097134 39950037 40097134 + ENST00000181839.8@CDK13 ENST00000181839.8 protein_coding 39950037,39987599,39997494,39999361,40001861,40045836,40047821,40062826,40063023,40078005,40078720,40088126,40092785,40094130 39951852,39988258,39997664,39999500,40002031,40046025,40047877,40062927,40063100,40078121,40078851,40088331,40093237,40097134 Gene ID= ENSG00000065883.14 TPM= 9.06 Transcript Type= protein_coding chr7 40134974 40496388 40134974 40496388 + transcript1041.chr7.nic@SUGCT transcript1041.chr7.nic protein_coding 40134974,40180947,40181955,40188495,40189544,40194940,40237635,40274513,40316760,40449287,40459101,40496284 40135120,40180998,40182028,40188580,40189594,40195060,40237726,40274656,40316855,40449358,40459198,40496388 Gene ID= ENSG00000175600.15 TPM= 5.43 Transcript Type= NA chr7 40134977 40860631 40134977 40860631 + ENST00000401647.6@SUGCT ENST00000401647.6 protein_coding 40134977,40180947,40181955,40188495,40189544,40194940,40237635,40316760,40449287,40459101,40496284,40749434,40860316 40135120,40180998,40182028,40188580,40189594,40195060,40237726,40316855,40449358,40459198,40496386,40749497,40860631 Gene ID= ENSG00000175600.15 TPM= 1.81 Transcript Type= protein_coding chr7 40742469 40860759 40742469 40860759 + transcript1043.chr7.nnic@SUGCT transcript1043.chr7.nnic protein_coding 40742469,40749434,40860316 40742692,40749497,40860759 Gene ID= ENSG00000175600.15 TPM= 50.71 Transcript Type= NA chr7 42916857 42932223 42916857 42932223 - ENST00000223321.8@PSMA2 ENST00000223321.8 protein_coding 42932118,42927383,42926536,42924675,42923325,42921858,42917778,42916857 42932223,42927459,42926668,42924797,42923406,42921931,42917835,42917690 Gene ID= ENSG00000106588.10 TPM= 239.97 Transcript Type= protein_coding chr7 42916882 42932154 42916882 42932154 - ENST00000436986.5@PSMA2 ENST00000436986.5 protein_coding 42932118,42931096,42927383,42926536,42924675,42923325,42921858,42917778,42916882 42932154,42931155,42927459,42926668,42924797,42923406,42921931,42917835,42917690 Gene ID= ENSG00000106588.10 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr7 42932200 42937857 42932200 42937857 + ENST00000223324.2@MRPL32 ENST00000223324.2 protein_coding 42932200,42934955,42937322 42932516,42935136,42937857 Gene ID= ENSG00000106591.3 TPM= 64.29 Transcript Type= protein_coding chr7 43583058 43625184 43583058 43625184 + transcript1067.chr7.nnic@STK17A transcript1067.chr7.nnic protein_coding 43583058,43595901,43608256,43619597,43623762,43624518 43583449,43596113,43608400,43619723,43623888,43625184 Gene ID= ENSG00000164543.5 TPM= 3.17 Transcript Type= NA chr7 43583065 43626786 43583065 43626786 + ENST00000319357.5@STK17A ENST00000319357.5 protein_coding 43583065,43595901,43608256,43619597,43623572,43623709,43624518 43583449,43596113,43608400,43619723,43623620,43623888,43626786 Gene ID= ENSG00000164543.5 TPM= 64.75 Transcript Type= protein_coding chr7 43608455 43729530 43608455 43729530 - transcript1058.chr7.nnic@COA1 transcript1058.chr7.nnic protein_coding 43729429,43648600,43647535,43645251,43640573,43639449,43631012,43608455 43729530,43648652,43647634,43645399,43640649,43639681,43631782,43609641 Gene ID= ENSG00000106603.18 TPM= 1.81 Transcript Type= NA chr7 43639254 43729523 43639254 43729523 - transcript1065.chr7.nic@COA1 transcript1065.chr7.nic protein_coding 43729429,43650612,43648600,43647535,43645251,43640573,43639254 43729523,43650712,43648652,43647634,43645399,43640649,43639681 Gene ID= ENSG00000106603.18 TPM= 2.11 Transcript Type= NA chr7 43639247 43729541 43639247 43729541 - ENST00000223336.10@COA1 ENST00000223336.10 protein_coding 43729429,43648600,43647535,43645251,43640573,43639247 43729541,43648652,43647634,43645399,43640649,43639681 Gene ID= ENSG00000106603.18 TPM= 9.35 Transcript Type= protein_coding chr7 43639257 43729489 43639257 43729489 - ENST00000310564.10@COA1 ENST00000310564.10 protein_coding 43729429,43650493,43648600,43647535,43645251,43640573,43639257 43729489,43650712,43648652,43647634,43645399,43640649,43639681 Gene ID= ENSG00000106603.18 TPM= 1.2 Transcript Type= protein_coding chr7 43758680 43807339 43758680 43807339 + ENST00000265523.8@BLVRA ENST00000265523.8 protein_coding 43758680,43771138,43787904,43791249,43792715,43800465,43803676,43806977 43758734,43771170,43788025,43791368,43792812,43800572,43803847,43807339 Gene ID= ENSG00000106605.10 TPM= 63.84 Transcript Type= protein_coding chr7 43758687 43807342 43758687 43807342 + ENST00000402924.5@BLVRA ENST00000402924.5 protein_coding 43758687,43760017,43771138,43787904,43791249,43792715,43800465,43803676,43806977 43758734,43760110,43771170,43788025,43791368,43792812,43800572,43803847,43807342 Gene ID= ENSG00000106605.10 TPM= 6.79 Transcript Type= protein_coding chr7 43866558 43869557 43866558 43869557 - ENST00000317534.5@MRPS24 ENST00000317534.5 protein_coding 43869457,43869308,43868963,43866558 43869557,43869376,43869074,43866982 Gene ID= ENSG00000062582.13 TPM= 139 Transcript Type= protein_coding chr7 43866562 43869517 43866562 43869517 - ENST00000418740.5@MRPS24 ENST00000418740.5 protein_coding 43869308,43868963,43866562 43869517,43869074,43866982 Gene ID= ENSG00000062582.13 TPM= 13.13 Transcript Type= protein_coding chr7 43873650 43906621 43873650 43906621 - transcript1088.chr7.nnic@URGCP transcript1088.chr7.nnic protein_coding 43906562,43895550,43887790,43887415,43881907,43881659,43873650 43906621,43895667,43887816,43887485,43881957,43881697,43879260 Gene ID= ENSG00000106608.16 TPM= 10.34 Transcript Type= NA chr7 43873650 43926735 43873650 43926735 - transcript1090.chr7.nnic@URGCP transcript1090.chr7.nnic protein_coding 43926132,43910731,43887790,43887415,43881907,43881659,43873650 43926735,43910848,43887816,43887485,43881957,43881697,43879260 Gene ID= ENSG00000106608.16 TPM= 12.15 Transcript Type= NA chr7 43875913 43906615 43875913 43906615 - ENST00000402306.7@URGCP ENST00000402306.7 protein_coding 43906562,43887415,43881907,43881659,43875913 43906615,43887485,43881957,43881697,43879260 Gene ID= ENSG00000106608.16 TPM= 24.22 Transcript Type= protein_coding chr7 43926432 43953564 43926432 43953564 + transcript1085.chr7.nic@UBE2D4 transcript1085.chr7.nic protein_coding 43926432,43938431,43942826,43942954,43947159,43948632,43950599,43952650 43926556,43938494,43942857,43943031,43947229,43948737,43950692,43953564 Gene ID= ENSG00000078967.12 TPM= 2.72 Transcript Type= NA chr7 43926444 43956136 43926444 43956136 + ENST00000222402.7@UBE2D4 ENST00000222402.7 protein_coding 43926444,43938431,43942826,43942954,43948632,43950599,43952650 43926556,43938494,43942857,43943031,43948737,43950692,43956136 Gene ID= ENSG00000078967.12 TPM= 28.07 Transcript Type= protein_coding chr7 44013565 44019184 44013565 44019184 - transcript1110.chr7.nic@POLR2J4 transcript1110.chr7.nic processed_transcript 44019061,44016434,44014606,44013565 44019184,44016523,44014783,44013679 Gene ID= ENSG00000214783.9 TPM= 2.72 Transcript Type= NA chr7 44044717 44061716 44044717 44061716 + ENST00000494774.5@DBNL ENST00000494774.5 protein_coding 44044717,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058902,44059354,44059543,44060048,44060777 44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061716 Gene ID= ENSG00000136279.20 TPM= 182.92 Transcript Type= protein_coding chr7 44044711 44061637 44044711 44061637 + ENST00000468694.5@DBNL ENST00000468694.5 protein_coding 44044711,44050225,44051830,44052867,44056757,44057782,44058129,44058429,44058878,44059354,44059543,44060048,44060777 44044820,44050280,44051942,44052941,44056903,44057859,44058280,44058480,44058983,44059449,44059658,44060153,44061637 Gene ID= ENSG00000136279.20 TPM= 2.72 Transcript Type= protein_coding chr7 44062286 44069259 44062286 44069259 + transcript1123.chr7.nnic@AC017116.1 transcript1123.chr7.nnic sense_overlapping 44062286,44065982,44068547 44065517,44066077,44069259 Gene ID= ENSG00000239775.1 TPM= 5.43 Transcript Type= NA chr7 44062727 44065587 44062727 44065587 - ENST00000297283.3@PGAM2 ENST00000297283.3 protein_coding 44065116,44064832,44062727 44065587,44065012,44062930 Gene ID= ENSG00000164708.5 TPM= 8.15 Transcript Type= protein_coding chr7 44072250 44082545 44072250 44082545 - transcript1131.chr7.nnic@POLM transcript1131.chr7.nnic protein_coding 44082251,44080733,44079861,44079571,44078740,44075484,44074398,44074131,44073989,44073783,44073625,44072250 44082545,44080916,44079959,44079741,44078811,44076629,44074530,44074220,44074025,44073901,44073708,44073430 Gene ID= ENSG00000122678.16 TPM= 1.81 Transcript Type= NA chr7 44072250 44082545 44072250 44082545 - transcript1136.chr7.nic@POLM transcript1136.chr7.nic protein_coding 44082251,44080733,44079861,44079571,44078740,44076509,44074398,44074131,44073783,44073625,44072250 44082545,44080916,44079959,44079741,44078811,44076629,44074530,44074220,44074025,44073708,44073430 Gene ID= ENSG00000122678.16 TPM= 2.04 Transcript Type= NA chr7 44072250 44082545 44072250 44082545 - transcript1139.chr7.nnic@POLM transcript1139.chr7.nnic protein_coding 44082251,44080733,44079861,44079571,44078756,44074398,44074131,44073783,44073625,44072250 44082545,44080916,44079959,44079741,44078811,44074530,44074184,44074025,44073708,44073377 Gene ID= ENSG00000122678.16 TPM= 1.81 Transcript Type= NA chr7 44072065 44082545 44072065 44082545 - transcript1140.chr7.nic@POLM transcript1140.chr7.nic protein_coding 44082251,44080733,44079861,44079571,44078756,44074398,44074131,44073783,44073625,44072065 44082545,44080916,44079959,44079741,44078811,44074530,44074220,44074025,44073708,44073377 Gene ID= ENSG00000122678.16 TPM= 2.72 Transcript Type= NA chr7 44072250 44082545 44072250 44082545 - transcript1144.chr7.nic@POLM transcript1144.chr7.nic protein_coding 44082251,44080733,44079861,44079571,44078740,44076509,44074131,44073783,44073625,44072250 44082545,44080916,44079959,44079741,44078811,44076629,44074530,44074025,44073708,44073430 Gene ID= ENSG00000122678.16 TPM= 2.04 Transcript Type= NA chr7 44072247 44082540 44072247 44082540 - ENST00000242248.9@POLM ENST00000242248.9 protein_coding 44082251,44080733,44079861,44079571,44078740,44076509,44074398,44074131,44073783,44073625,44072247 44082540,44080916,44079959,44079741,44078811,44076629,44074530,44074233,44074025,44073708,44073377 Gene ID= ENSG00000122678.16 TPM= 7.24 Transcript Type= protein_coding chr7 44072256 44082485 44072256 44082485 - ENST00000395831.7@POLM ENST00000395831.7 protein_coding 44082251,44080733,44079861,44079571,44078756,44074398,44073783,44073625,44072256 44082485,44080916,44079959,44079741,44078811,44074530,44074025,44073708,44073430 Gene ID= ENSG00000122678.16 TPM= 1.13 Transcript Type= protein_coding chr7 44104361 44114560 44104361 44114560 + ENST00000223357.7@AEBP1 ENST00000223357.7 protein_coding 44104361,44106546,44107439,44107629,44107809,44108007,44108899,44109107,44109288,44110015,44110207,44110725,44110913,44111154,44111507,44111854,44112142,44112558,44112991,44113252,44113594 44104918,44106887,44107510,44107700,44107931,44108084,44108976,44109184,44109341,44110124,44110346,44110809,44111057,44111239,44111630,44112050,44112321,44112909,44113130,44113351,44114560 Gene ID= ENSG00000106624.10 TPM= 201.48 Transcript Type= protein_coding chr7 44114671 44123573 44114671 44123573 - transcript1172.chr7.nic@POLD2 transcript1172.chr7.nic protein_coding 44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114671 44123573,44122109,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115354,44114945 Gene ID= ENSG00000106628.10 TPM= 3.92 Transcript Type= NA chr7 44114681 44123559 44114681 44123559 - ENST00000610533.4@POLD2 ENST00000610533.4 protein_coding 44123511,44121834,44117943,44117619,44117133,44116817,44116430,44116115,44115766,44115295,44114681 44123559,44122109,44118064,44117742,44117247,44117015,44116510,44116272,44115893,44115396,44114945 Gene ID= ENSG00000106628.10 TPM= 126.17 Transcript Type= protein_coding chr7 44201049 44214294 44201049 44214294 + ENST00000223369.2@YKT6 ENST00000223369.2 protein_coding 44201049,44204568,44206385,44207388,44208133,44211023,44212247 44201239,44204650,44206485,44207492,44208198,44211124,44214294 Gene ID= ENSG00000106636.7 TPM= 27.17 Transcript Type= protein_coding chr7 44565417 44574002 44565417 44574002 - ENST00000258772.9@DDX56 ENST00000258772.9 protein_coding 44573836,44573583,44572890,44572574,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565417 44574002,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079 Gene ID= ENSG00000136271.10 TPM= 107.15 Transcript Type= protein_coding chr7 44565804 44573895 44565804 44573895 - ENST00000446987.5@DDX56 ENST00000446987.5 protein_coding 44573836,44573583,44572890,44572563,44572347,44571492,44570758,44570015,44569809,44569130,44568903,44568118,44566448,44565804 44573895,44573744,44573050,44572744,44572437,44571736,44570877,44570128,44569903,44569203,44568992,44568223,44566524,44566079 Gene ID= ENSG00000136271.10 TPM= 5.73 Transcript Type= nonsense_mediated_decay chr7 44577894 44582287 44577894 44582287 - ENST00000289577.9@TMED4 ENST00000289577.9 protein_coding 44582047,44581723,44581449,44577894 44582287,44581823,44581574,44579628 Gene ID= ENSG00000158604.14 TPM= 19.47 Transcript Type= protein_coding chr7 44579897 44582231 44579897 44582231 - ENST00000481238.1@TMED4 ENST00000481238.1 protein_coding 44582047,44581723,44581449,44579897 44582231,44581823,44581574,44581239 Gene ID= ENSG00000158604.14 TPM= 21.73 Transcript Type= protein_coding chr7 44577894 44582259 44577894 44582259 - ENST00000457408.6@TMED4 ENST00000457408.6 protein_coding 44582047,44581723,44581449,44581093,44577894 44582259,44581823,44581574,44581239,44579628 Gene ID= ENSG00000158604.14 TPM= 78.33 Transcript Type= protein_coding chr7 44606569 44709067 44606569 44709067 + transcript1211.chr7.nnic@OGDH transcript1211.chr7.nnic protein_coding 44606569,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879,44708928 44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44708018,44709067 Gene ID= ENSG00000105953.14 TPM= 1.81 Transcript Type= NA chr7 44606569 44626422 44606569 44626422 + transcript1217.chr7.nnic@OGDH transcript1217.chr7.nnic protein_coding 44606569,44618824,44624317 44606653,44618934,44626422 Gene ID= ENSG00000105953.14 TPM= 1.81 Transcript Type= NA chr7 44606588 44676594 44606588 44676594 + ENST00000443864.6@OGDH ENST00000443864.6 protein_coding 44606588,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970 44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676594 Gene ID= ENSG00000105953.14 TPM= 1.81 Transcript Type= protein_coding chr7 44606639 44709066 44606639 44709066 + ENST00000222673.5@OGDH ENST00000222673.5 protein_coding 44606639,44624317,44645327,44647657,44666736,44673787,44674411,44675178,44675970,44681720,44693825,44694424,44696025,44696429,44696914,44697370,44697604,44698192,44700141,44701543,44707225,44707582,44707879 44606653,44624565,44645518,44647759,44666851,44673941,44674557,44675268,44676149,44681848,44694004,44694576,44696127,44696557,44697064,44697497,44697782,44698263,44700269,44701615,44707388,44707736,44709066 Gene ID= ENSG00000105953.14 TPM= 66.1 Transcript Type= protein_coding chr7 44796680 44803117 44796680 44803117 + ENST00000468812.5@PPIA ENST00000468812.5 protein_coding 44796680,44799247,44799392,44799702,44801287 44796793,44799277,44799480,44799874,44803117 Gene ID= ENSG00000196262.13 TPM= 751.22 Transcript Type= protein_coding chr7 44796681 44801631 44796681 44801631 + ENST00000355968.10@PPIA ENST00000355968.10 protein_coding 44796681,44798748,44799247,44799392,44799702,44801287 44796793,44798814,44799277,44799480,44799874,44801631 Gene ID= ENSG00000196262.13 TPM= 7.77 Transcript Type= protein_coding chr7 44796681 44801630 44796681 44801630 + ENST00000489459.5@PPIA ENST00000489459.5 protein_coding 44796681,44798748,44799247,44799392,44799702,44801287 44796793,44798904,44799277,44799480,44799874,44801630 Gene ID= ENSG00000196262.13 TPM= 9.28 Transcript Type= protein_coding chr7 44826791 44848077 44826791 44848077 - ENST00000222690.10@H2AFV ENST00000222690.10 protein_coding 44847969,44843277,44840899,44835529,44826791 44848077,44843354,44841012,44835658,44830163 Gene ID= ENSG00000105968.18 TPM= 4.53 Transcript Type= protein_coding chr7 44834228 44848063 44834228 44848063 - ENST00000308153.8@H2AFV ENST00000308153.8 protein_coding 44847969,44843277,44840899,44835529,44834228 44848063,44843354,44841012,44835658,44834562 Gene ID= ENSG00000105968.18 TPM= 49.35 Transcript Type= protein_coding chr7 44834228 44848076 44834228 44848076 - ENST00000350771.7@H2AFV ENST00000350771.7 protein_coding 44847969,44840899,44835529,44834228 44848076,44841012,44835658,44834562 Gene ID= ENSG00000105968.18 TPM= 2.26 Transcript Type= protein_coding chr7 44962666 44979098 44962666 44979098 - ENST00000258787.11@MYO1G ENST00000258787.11 protein_coding 44978867,44976863,44976564,44975484,44975174,44972115,44971673,44970835,44970592,44970040,44969705,44969413,44967884,44967605,44966672,44966073,44965637,44964945,44964415,44964049,44962970,44962666 44979098,44977071,44976657,44975649,44975227,44972225,44971789,44971059,44970737,44970154,44969875,44969483,44967958,44967737,44966838,44966280,44965860,44965089,44964519,44964162,44963124,44962895 Gene ID= ENSG00000136286.14 TPM= 18.11 Transcript Type= protein_coding chr7 44983023 44986834 44983023 44986834 - ENST00000578968.5@SNHG15 ENST00000578968.5 lincRNA 44986525,44986021,44984357,44983822,44983023 44986834,44986097,44984426,44984046,44983322 Gene ID= ENSG00000232956.8 TPM= 14.49 Transcript Type= lincRNA chr7 44983024 44986677 44983024 44986677 - transcript1240.chr7.nic@SNHG15 transcript1240.chr7.nic lincRNA 44986525,44983822,44983024 44986677,44986097,44983322 Gene ID= ENSG00000232956.8 TPM= 3.62 Transcript Type= NA chr7 45027634 45076469 45027634 45076469 + ENST00000381112.7@CCM2 ENST00000381112.7 protein_coding 45027634,45038253,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777 45027797,45038426,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076469 Gene ID= ENSG00000136280.15 TPM= 5.9 Transcript Type= protein_coding chr7 45000185 45076467 45000185 45076467 + ENST00000258781.10@CCM2 ENST00000258781.10 protein_coding 45000185,45038253,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777 45000363,45038426,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076467 Gene ID= ENSG00000136280.15 TPM= 110.94 Transcript Type= protein_coding chr7 45000188 45076469 45000188 45076469 + ENST00000541586.5@CCM2 ENST00000541586.5 protein_coding 45000188,45063918,45064463,45068443,45069826,45072726,45073460,45074270,45075777 45000363,45064001,45064646,45068579,45069961,45072783,45073571,45074408,45076469 Gene ID= ENSG00000136280.15 TPM= 50.72 Transcript Type= protein_coding chr7 45000188 45076469 45000188 45076469 + ENST00000544363.5@CCM2 ENST00000544363.5 protein_coding 45000188,45038253,45063918,45064463,45072726,45073460,45074270,45075777 45000363,45038426,45064001,45064646,45072783,45073571,45074408,45076469 Gene ID= ENSG00000136280.15 TPM= 5.14 Transcript Type= protein_coding chr7 45000249 45076414 45000249 45076414 + ENST00000488727.5@CCM2 ENST00000488727.5 protein_coding 45000249,45038253,45063918,45064463,45068443,45069826,45073460,45074270,45075777 45000363,45038426,45064001,45064646,45068579,45069961,45073571,45074408,45076414 Gene ID= ENSG00000136280.15 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr7 45097577 45111744 45097577 45111744 - transcript1275.chr7.nnic@TBRG4 transcript1275.chr7.nnic protein_coding 45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101853,45101503,45101258,45097577 45111744,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426 Gene ID= ENSG00000136270.13 TPM= 3.73 Transcript Type= NA chr7 45100100 45111714 45100100 45111714 - ENST00000258770.7@TBRG4 ENST00000258770.7 protein_coding 45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100100 45111714,45109287,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426 Gene ID= ENSG00000136270.13 TPM= 124.39 Transcript Type= protein_coding chr7 45100100 45111718 45100100 45111718 - ENST00000361278.7@TBRG4 ENST00000361278.7 protein_coding 45111643,45108827,45105441,45103333,45102347,45101825,45101503,45101258,45100100 45111718,45109287,45105764,45103443,45102491,45102070,45101614,45101372,45100426 Gene ID= ENSG00000136270.13 TPM= 9.02 Transcript Type= protein_coding chr7 45100101 45111706 45100101 45111706 - ENST00000494076.5@TBRG4 ENST00000494076.5 protein_coding 45111643,45108827,45105441,45104538,45104099,45103333,45102347,45101825,45101503,45101258,45100101 45111706,45109243,45105764,45104709,45104256,45103443,45102491,45102070,45101614,45101372,45100426 Gene ID= ENSG00000136270.13 TPM= 5.76 Transcript Type= protein_coding chr7 45157791 45184250 45157791 45184250 + ENST00000242249.8@RAMP3 ENST00000242249.8 protein_coding 45157791,45177309,45183157 45157886,45177441,45184250 Gene ID= ENSG00000122679.8 TPM= 93.27 Transcript Type= protein_coding chr7 45726332 45769008 45726332 45769008 - transcript1303.chr7.nnic@SEPT7P2 transcript1303.chr7.nnic transcribed_unprocessed_pseudogene 45768660,45759074,45758043,45756909,45751529,45748626,45747215,45744997,45736787,45728178,45726332 45769008,45759174,45758177,45756992,45751646,45748714,45747311,45745048,45736910,45728313,45726861 Gene ID= ENSG00000214765.8 TPM= 5.43 Transcript Type= NA chr7 45782767 45807552 45782767 45807552 + transcript1306.chr7.nnic@GTF2IP13 transcript1306.chr7.nnic transcribed_unprocessed_pseudogene 45782767,45788717,45791788,45795075,45797039,45797478,45798533,45805097,45807340,45807490 45783144,45788954,45791852,45795192,45797140,45797668,45798601,45805289,45807397,45807552 Gene ID= ENSG00000272556.2 TPM= 4.53 Transcript Type= NA chr7 47275154 47328245 47275154 47328245 - transcript1316.chr7.nnic@TNS3 transcript1316.chr7.nnic protein_coding 47327981,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154 47328245,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220 Gene ID= ENSG00000136205.16 TPM= 24.45 Transcript Type= NA chr7 47275154 47582144 47275154 47582144 - ENST00000311160.13@TNS3 ENST00000311160.13 protein_coding 47582051,47529036,47506907,47481103,47442003,47439487,47437263,47435282,47428312,47424101,47415094,47413937,47411727,47400785,47400393,47396800,47368365,47346187,47344924,47344755,47304832,47302950,47302186,47297082,47293733,47292828,47291955,47283697,47280286,47280164,47275154 47582144,47529147,47506944,47481141,47442055,47439658,47437313,47435404,47428376,47424184,47415206,47413997,47411802,47400914,47400458,47396904,47369621,47346356,47345038,47344838,47305003,47303584,47302272,47297213,47293828,47292905,47292032,47283865,47280354,47280190,47278220 Gene ID= ENSG00000136205.16 TPM= 42.56 Transcript Type= protein_coding chr7 47963290 47979567 47963290 47979567 - transcript1324.chr7.nic@HUS1 transcript1324.chr7.nic protein_coding 47979468,47978689,47978417,47976730,47975613,47969219,47967806,47965300,47963290 47979567,47978816,47978593,47976837,47975687,47969318,47967925,47965438,47964632 Gene ID= ENSG00000136273.11 TPM= 2.72 Transcript Type= NA chr7 47963288 47979543 47963288 47979543 - ENST00000258774.9@HUS1 ENST00000258774.9 protein_coding 47979468,47978689,47978417,47976730,47975613,47969219,47967806,47963288 47979543,47978816,47978593,47976837,47975687,47969318,47967925,47965438 Gene ID= ENSG00000136273.11 TPM= 5.43 Transcript Type= protein_coding chr7 47965166 47979553 47965166 47979553 - ENST00000432325.5@HUS1 ENST00000432325.5 protein_coding 47979410,47978689,47978417,47976730,47975613,47969219,47967806,47965166 47979553,47978816,47978593,47976837,47975687,47969318,47967925,47965438 Gene ID= ENSG00000136273.11 TPM= 1.81 Transcript Type= protein_coding chr7 48089198 48108423 48089198 48108423 + transcript1332.chr7.nic@UPP1 transcript1332.chr7.nic protein_coding 48089198,48090250,48094763,48099670,48101824,48103297,48106873,48107361,48108218 48089418,48090364,48094827,48099787,48101982,48103411,48107082,48107507,48108423 Gene ID= ENSG00000183696.13 TPM= 3.62 Transcript Type= NA chr7 48089265 48108419 48089265 48108419 + ENST00000395560.7@UPP1 ENST00000395560.7 protein_coding 48089265,48090188,48094763,48106873,48107361,48108218 48089418,48090364,48094827,48107082,48107507,48108419 Gene ID= ENSG00000183696.13 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr7 48089237 48108419 48089237 48108419 + ENST00000395564.8@UPP1 ENST00000395564.8 protein_coding 48089237,48090188,48094763,48099670,48101824,48103297,48106873,48107361,48108218 48089418,48090364,48094827,48099787,48101982,48103411,48107082,48107507,48108419 Gene ID= ENSG00000183696.13 TPM= 2.72 Transcript Type= protein_coding chr7 50444129 50450390 50444129 50450390 - ENST00000615084.4@FIGNL1 ENST00000615084.4 protein_coding 50450301,50448181,50444129 50450390,50448289,50447297 Gene ID= ENSG00000132436.11 TPM= 2.72 Transcript Type= protein_coding chr7 50590062 50793494 50590062 50793494 - transcript1366.chr7.nnic@GRB10 transcript1366.chr7.nnic protein_coding 50793224,50755887,50732272,50705140,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50793494,50756056,50732368,50705323,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 5.01 Transcript Type= NA chr7 50590062 50782911 50590062 50782911 - transcript1367.chr7.nic@GRB10 transcript1367.chr7.nic protein_coding 50782424,50755887,50732272,50710875,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50782911,50756056,50732368,50710990,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 4.1 Transcript Type= NA chr7 50590062 50793494 50590062 50793494 - transcript1368.chr7.nic@GRB10 transcript1368.chr7.nic protein_coding 50793224,50755887,50732272,50710875,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50793494,50756056,50732368,50710990,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 10.44 Transcript Type= NA chr7 50590062 50782911 50590062 50782911 - transcript1379.chr7.nic@GRB10 transcript1379.chr7.nic protein_coding 50782424,50755887,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50782911,50756056,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 6.82 Transcript Type= NA chr7 50590062 50793494 50590062 50793494 - transcript1382.chr7.nic@GRB10 transcript1382.chr7.nic protein_coding 50793224,50755887,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50793494,50756056,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 30.36 Transcript Type= NA chr7 50590062 50782886 50590062 50782886 - transcript1392.chr7.nnic@GRB10 transcript1392.chr7.nnic protein_coding 50782424,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50782886,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 4.1 Transcript Type= NA chr7 50590062 50793454 50590062 50793454 - transcript1393.chr7.nic@GRB10 transcript1393.chr7.nic protein_coding 50793224,50732272,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50793454,50732368,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 10.44 Transcript Type= NA chr7 50590062 50782911 50590062 50782911 - transcript1394.chr7.nic@GRB10 transcript1394.chr7.nic protein_coding 50782424,50755887,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590062 50782911,50756056,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 6.82 Transcript Type= NA chr7 50590063 50793462 50590063 50793462 - ENST00000335866.7@GRB10 ENST00000335866.7 protein_coding 50793224,50755887,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50590063 50793462,50756056,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 17.69 Transcript Type= protein_coding chr7 50592610 50793436 50592610 50793436 - ENST00000402497.5@GRB10 ENST00000402497.5 protein_coding 50793224,50703821,50674436,50669722,50626822,50619170,50618071,50616210,50614770,50612741,50606337,50605290,50604311,50603998,50595437,50592610 50793436,50703908,50674658,50669863,50626978,50619285,50618139,50616347,50614880,50612839,50606414,50605406,50604377,50604085,50595530,50593098 Gene ID= ENSG00000106070.17 TPM= 6.34 Transcript Type= protein_coding chr7 54752251 54759246 54752251 54759246 - ENST00000352861.8@SEC61G ENST00000352861.8 protein_coding 54759158,54757495,54755779,54752251 54759246,54757594,54755881,54752420 Gene ID= ENSG00000132432.13 TPM= 86.48 Transcript Type= protein_coding chr7 54752257 54759182 54752257 54759182 - ENST00000450622.1@SEC61G ENST00000450622.1 protein_coding 54759038,54757495,54755779,54752257 54759182,54757594,54755881,54752420 Gene ID= ENSG00000132432.13 TPM= 3.17 Transcript Type= protein_coding chr7 55019101 55211628 55019101 55211628 + ENST00000275493.6@EGFR ENST00000275493.6 protein_coding 55019101,55142286,55143305,55146606,55151294,55152546,55154011,55155830,55156533,55156759,55157663,55160139,55161499,55163733,55165280,55171175,55172983,55173921,55174722,55181293,55191719,55192766,55198717,55200316,55201188,55201735,55202517,55205256 55019365,55142437,55143488,55146740,55151362,55152664,55154152,55155946,55156659,55156832,55157753,55160338,55161631,55163823,55165437,55171213,55173124,55174043,55174820,55181478,55191874,55192841,55198863,55200413,55201355,55201782,55202625,55211628 Gene ID= ENSG00000146648.17 TPM= 17.21 Transcript Type= protein_coding chr7 55365448 55433742 55365448 55433742 + ENST00000254770.2@LANCL2 ENST00000254770.2 protein_coding 55365448,55391793,55398423,55399957,55401174,55411907,55425254,55428375,55431226 55366229,55391910,55398630,55400104,55401320,55412089,55425430,55428447,55433742 Gene ID= ENSG00000132434.9 TPM= 14.49 Transcript Type= protein_coding chr7 55470613 55572525 55470613 55572525 - ENST00000285279.9@VOPP1 ENST00000285279.9 protein_coding 55572271,55521072,55497613,55492282,55470613 55572525,55521130,55497690,55492418,55473045 Gene ID= ENSG00000154978.12 TPM= 116.82 Transcript Type= protein_coding chr7 55951819 55956501 55951819 55956501 + ENST00000285298.8@MRPS17 ENST00000285298.8 protein_coding 55951819,55953179,55954909 55951930,55953318,55956501 Gene ID= ENSG00000239789.5 TPM= 22.64 Transcript Type= protein_coding chr7 55964926 56000183 55964926 56000183 + transcript1445.chr7.nnic@NIPSNAP2 transcript1445.chr7.nnic protein_coding 55964926,55978126,55978350,55981473,55982210,55983728,55984847,55994894,55997366,55999008 55965290,55978265,55978395,55981567,55982280,55983868,55984878,55994988,55997449,56000183 Gene ID= ENSG00000146729.9 TPM= 7.29 Transcript Type= NA chr7 55964935 56000183 55964935 56000183 + transcript1446.chr7.nic@NIPSNAP2 transcript1446.chr7.nic protein_coding 55964935,55978126,55978350,55981473,55982210,55983728,55984847,55994894,55997366,55999008 55965150,55978265,55978395,55981567,55982280,55983868,55984878,55994988,55997449,56000183 Gene ID= ENSG00000146729.9 TPM= 11.82 Transcript Type= NA chr7 55964581 56000181 55964581 56000181 + ENST00000322090.7@NIPSNAP2 ENST00000322090.7 protein_coding 55964581,55978126,55978350,55981473,55982210,55983728,55984847,55994894,55997366,55999008 55964701,55978265,55978395,55981567,55982280,55983868,55984878,55994988,55997449,56000181 Gene ID= ENSG00000146729.9 TPM= 239.11 Transcript Type= protein_coding chr7 56011067 56051590 56011067 56051590 - transcript1466.chr7.nnic@PSPH transcript1466.chr7.nnic protein_coding 56051138,56043148,56033961,56033381,56031929,56021073,56019600,56017234,56015023,56011067 56051590,56043261,56034106,56033494,56032054,56021231,56019734,56017379,56015171,56011869 Gene ID= ENSG00000146733.13 TPM= 1.81 Transcript Type= NA chr7 56011066 56051604 56011066 56051604 - transcript1477.chr7.nic@PSPH transcript1477.chr7.nic protein_coding 56051138,56033961,56033381,56031929,56021073,56019600,56017234,56015023,56011066 56051604,56034103,56033494,56032054,56021231,56019734,56017379,56015171,56011869 Gene ID= ENSG00000146733.13 TPM= 1.81 Transcript Type= NA chr7 56011068 56051586 56011068 56051586 - transcript1479.chr7.nic@PSPH transcript1479.chr7.nic protein_coding 56051138,56033961,56033381,56031929,56021073,56019600,56017234,56015023,56011068 56051586,56034154,56033494,56032054,56021231,56019734,56017379,56015171,56011869 Gene ID= ENSG00000146733.13 TPM= 3.62 Transcript Type= NA chr7 56010324 56034200 56010324 56034200 - transcript1497.chr7.nic@PSPH transcript1497.chr7.nic protein_coding 56033961,56031929,56021073,56019600,56017234,56015023,56010324 56034200,56032054,56021231,56019734,56017379,56015171,56011869 Gene ID= ENSG00000146733.13 TPM= 4.53 Transcript Type= NA chr7 56011615 56116265 56011615 56116265 - transcript1503.chr7.nnic@PSPH transcript1503.chr7.nnic protein_coding 56116224,56116015,56021119,56018219,56011615 56116265,56116131,56021231,56018340,56011869 Gene ID= ENSG00000146733.13 TPM= 2.72 Transcript Type= NA chr7 56011067 56051604 56011067 56051604 - ENST00000275605.7@PSPH ENST00000275605.7 protein_coding 56051138,56033961,56031929,56021073,56019600,56017234,56015023,56011067 56051604,56034106,56032054,56021231,56019734,56017379,56015171,56011869 Gene ID= ENSG00000146733.13 TPM= 4.53 Transcript Type= protein_coding chr7 56011068 56051604 56011068 56051604 - ENST00000395471.7@PSPH ENST00000395471.7 protein_coding 56051138,56033961,56031929,56021073,56019600,56017234,56015023,56011068 56051604,56034154,56032054,56021231,56019734,56017379,56015171,56011869 Gene ID= ENSG00000146733.13 TPM= 9.96 Transcript Type= protein_coding chr7 56051630 56063989 56051630 56063989 + ENST00000275603.8@CCT6A ENST00000275603.8 protein_coding 56051630,56052422,56054369,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013 56051985,56052485,56054503,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989 Gene ID= ENSG00000146731.10 TPM= 196.8 Transcript Type= protein_coding chr7 56051685 56063989 56051685 56063989 + ENST00000335503.3@CCT6A ENST00000335503.3 protein_coding 56051685,56052422,56055624,56056311,56057993,56058362,56058620,56059544,56060269,56060807,56061747,56062683,56063013 56051985,56052485,56055797,56056414,56058103,56058521,56058702,56059640,56060416,56060940,56061849,56062755,56063989 Gene ID= ENSG00000146731.10 TPM= 3.47 Transcript Type= protein_coding chr7 56064224 56080670 56064224 56080670 + ENST00000434526.6@SUMF2 ENST00000434526.6 protein_coding 56064224,56068482,56072997,56074174,56074586,56076834,56078102,56078364,56079528 56064378,56068638,56073111,56074218,56074736,56076889,56078186,56078508,56080670 Gene ID= ENSG00000129103.17 TPM= 134.47 Transcript Type= protein_coding chr7 56064224 56080669 56064224 56080669 + ENST00000275607.13@SUMF2 ENST00000275607.13 protein_coding 56064224,56072997,56074174,56074586,56076834,56078102,56078364,56079528 56064378,56073111,56074218,56074736,56076889,56078186,56078508,56080669 Gene ID= ENSG00000129103.17 TPM= 2.26 Transcript Type= protein_coding chr7 56064308 56080669 56064308 56080669 + ENST00000438133.5@SUMF2 ENST00000438133.5 protein_coding 56064308,56068482,56072997,56076834,56078102,56078364,56079528 56064378,56068638,56073111,56076889,56078186,56078508,56080669 Gene ID= ENSG00000129103.17 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr7 56064301 56080638 56064301 56080638 + ENST00000423763.5@SUMF2 ENST00000423763.5 protein_coding 56064301,56068482,56072997,56074174,56076834,56078102,56078364,56079528 56064378,56068638,56073111,56074218,56076889,56078186,56078508,56080638 Gene ID= ENSG00000129103.17 TPM= 1.13 Transcript Type= nonsense_mediated_decay chr7 56080283 56092996 56080283 56092996 - ENST00000537360.5@PHKG1 ENST00000537360.5 protein_coding 56092836,56088859,56087598,56086970,56083650,56083278,56082163,56081893,56081630,56080283 56092996,56088975,56087776,56087024,56083724,56083441,56082253,56082046,56081755,56081299 Gene ID= ENSG00000164776.9 TPM= 7.34 Transcript Type= protein_coding chr7 57404243 57419534 57404243 57419534 + transcript1517.chr7.nnic@AC237221.1 transcript1517.chr7.nnic lincRNA 57404243,57407074,57407483,57408276,57418628,57418875 57404369,57407170,57407550,57408401,57418767,57419534 Gene ID= ENSG00000260653.5 TPM= 1.81 Transcript Type= NA chr7 64519879 64563096 64519879 64563096 - transcript1528.chr7.nic@ZNF680 transcript1528.chr7.nic protein_coding 64562925,64560946,64544306,64543707,64519879 64563096,64561273,64544432,64543802,64522500 Gene ID= ENSG00000173041.11 TPM= 2.72 Transcript Type= NA chr7 64519880 64563097 64519880 64563097 - transcript1529.chr7.nnic@ZNF680 transcript1529.chr7.nnic protein_coding 64562925,64544306,64543707,64535819,64519880 64563097,64544432,64543802,64535936,64522500 Gene ID= ENSG00000173041.11 TPM= 9.06 Transcript Type= NA chr7 64527340 64563097 64527340 64563097 - transcript1533.chr7.nnic@ZNF680 transcript1533.chr7.nnic protein_coding 64562925,64544306,64543707,64527340 64563097,64544432,64543802,64527881 Gene ID= ENSG00000173041.11 TPM= 1.81 Transcript Type= NA chr7 64519884 64563106 64519884 64563106 - ENST00000309683.10@ZNF680 ENST00000309683.10 protein_coding 64562925,64544306,64543707,64519884 64563106,64544432,64543802,64522500 Gene ID= ENSG00000173041.11 TPM= 30.79 Transcript Type= protein_coding chr7 64666083 64711582 64666083 64711582 + ENST00000620827.4@ZNF107 ENST00000620827.4 protein_coding 64666083,64691248,64691865,64706324 64666285,64691374,64691960,64711582 Gene ID= ENSG00000196247.11 TPM= 9.96 Transcript Type= protein_coding chr7 64666105 64692763 64666105 64692763 + transcript1547.chr7.nic@ZNF107 transcript1547.chr7.nic protein_coding 64666105,64691248,64691865 64666285,64691374,64692763 Gene ID= ENSG00000196247.11 TPM= 2.72 Transcript Type= NA chr7 64903240 64924432 64903240 64924432 + transcript1559.chr7.nic@ZNF273 transcript1559.chr7.nic protein_coding 64903240,64917581,64918197,64923386 64903419,64917707,64918292,64924432 Gene ID= ENSG00000198039.11 TPM= 5.43 Transcript Type= NA chr7 64903288 64930966 64903288 64930966 + ENST00000395375.3@ZNF273 ENST00000395375.3 protein_coding 64903288,64917030,64917581,64918197,64927654 64903419,64917118,64917707,64918292,64930966 Gene ID= ENSG00000198039.11 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr7 64974564 65006695 64974564 65006695 - transcript1565.chr7.nic@ZNF117 transcript1565.chr7.nic protein_coding 65006541,64981984,64981387,64974564 65006695,64982116,64981482,64979536 Gene ID= ENSG00000152926.14 TPM= 9.06 Transcript Type= NA chr7 65006084 65006659 65006084 65006659 - ENST00000535538.1@ERV3-1 ENST00000535538.1 protein_coding 65006541,65006084 65006659,65006322 Gene ID= ENSG00000213462.4 TPM= 2.72 Transcript Type= processed_transcript chr7 65038360 65074713 65038360 65074713 + ENST00000426828.5@CCT6P3 ENST00000426828.5 transcribed_unprocessed_pseudogene 65038360,65064999,65066253,65066945,65068456,65068709,65069661,65070346,65070909,65073441,65073778 65038565,65065133,65066426,65067050,65068610,65068790,65069757,65070484,65071042,65073514,65074713 Gene ID= ENSG00000234585.6 TPM= 9.06 Transcript Type= processed_transcript chr7 65373839 65401125 65373839 65401125 + ENST00000431504.1@ZNF92 ENST00000431504.1 protein_coding 65373839,65398341 65374000,65401125 Gene ID= ENSG00000146757.13 TPM= 2.26 Transcript Type= protein_coding chr7 65373799 65401125 65373799 65401125 + ENST00000328747.11@ZNF92 ENST00000328747.11 protein_coding 65373799,65387902,65388806,65398341 65374000,65388028,65388901,65401125 Gene ID= ENSG00000146757.13 TPM= 13.13 Transcript Type= protein_coding chr7 65714617 65750934 65714617 65750934 - transcript1581.chr7.nnic@AC073107.1 transcript1581.chr7.nnic lincRNA 65750883,65727055,65726771,65714617 65750934,65727108,65726944,65715848 Gene ID= ENSG00000272693.3 TPM= 1.81 Transcript Type= NA chr7 65751028 65764222 65751028 65764222 + transcript1584.chr7.nnic@CCT6P1 transcript1584.chr7.nnic transcribed_unprocessed_pseudogene 65751028,65752164,65754527,65755780,65756469,65757983,65758236,65759175,65759860,65760424,65762947,65763281 65751278,65752310,65754661,65755952,65756574,65758137,65758317,65759271,65759998,65760556,65763020,65764222 Gene ID= ENSG00000228409.6 TPM= 1.81 Transcript Type= NA chr7 65751060 65764222 65751060 65764222 + transcript1586.chr7.nic@CCT6P1 transcript1586.chr7.nic transcribed_unprocessed_pseudogene 65751060,65755780,65756469,65757983,65758236,65759175,65759860,65760424,65761646,65762947,65763281 65751278,65755952,65756574,65758137,65758317,65759271,65759998,65760556,65761748,65763020,65764222 Gene ID= ENSG00000228409.6 TPM= 2.72 Transcript Type= NA chr7 65960684 65982314 65960684 65982314 - ENST00000304895.8@GUSB ENST00000304895.8 protein_coding 65981974,65980224,65979727,65979399,65976015,65974919,65974526,65974295,65970282,65967731,65964323,65960684 65982314,65980409,65979911,65979541,65976202,65975071,65974704,65974441,65970366,65967907,65964458,65961063 Gene ID= ENSG00000169919.16 TPM= 121.57 Transcript Type= protein_coding chr7 65960688 65982260 65960688 65982260 - transcript1598.chr7.nic@GUSB transcript1598.chr7.nic protein_coding 65981974,65980224,65979727,65979399,65976015,65974526,65974295,65970282,65967731,65964323,65960688 65982260,65980409,65979911,65979541,65976202,65974704,65974441,65970366,65967907,65964458,65961063 Gene ID= ENSG00000169919.16 TPM= 31.01 Transcript Type= NA chr7 66075798 66093558 66075798 66093558 + ENST00000304874.13@ASL ENST00000304874.13 protein_coding 66075798,66076039,66081803,66082368,66082880,66083077,66086585,66086744,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768 66075856,66076093,66081997,66082451,66082936,66083174,66086662,66086821,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66093558 Gene ID= ENSG00000126522.16 TPM= 16.75 Transcript Type= protein_coding chr7 66075795 66093189 66075795 66093189 + transcript1614.chr7.nic@ASL transcript1614.chr7.nic protein_coding 66075795,66076039,66081803,66082368,66082880,66083077,66086585,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768 66075856,66076093,66081997,66082451,66082936,66083174,66086662,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66093189 Gene ID= ENSG00000126522.16 TPM= 5.89 Transcript Type= NA chr7 66075874 66092931 66075874 66092931 + ENST00000395332.7@ASL ENST00000395332.7 protein_coding 66075874,66081803,66082368,66082880,66083077,66086585,66086744,66087334,66087729,66088807,66089091,66089276,66089612,66092006,66092557,66092768 66076093,66081997,66082451,66082936,66083174,66086662,66086821,66087386,66087791,66088921,66089175,66089335,66089695,66092086,66092663,66092931 Gene ID= ENSG00000126522.16 TPM= 8.15 Transcript Type= protein_coding chr7 66114605 66154561 66114605 66154561 + ENST00000395326.7@CRCP ENST00000395326.7 protein_coding 66114605,66127704,66130744,66134280,66145443,66152208 66114970,66127740,66130842,66134374,66145500,66154561 Gene ID= ENSG00000241258.6 TPM= 13.58 Transcript Type= protein_coding chr7 66205199 66360443 66205199 66360443 + ENST00000304842.5@TPST1 ENST00000304842.5 protein_coding 66205199,66240325,66286511,66352505,66356825,66359895 66205522,66241270,66286709,66352555,66356871,66360443 Gene ID= ENSG00000169902.13 TPM= 53.43 Transcript Type= protein_coding chr7 66553566 66592359 66553566 66592359 - transcript1652.chr7.nnic@AC006001.3 transcript1652.chr7.nnic transcribed_unprocessed_pseudogene 66592257,66576755,66573385,66560579,66553566 66592359,66576932,66573550,66560675,66554837 Gene ID= ENSG00000229180.6 TPM= 2.26 Transcript Type= NA chr7 66553566 66592386 66553566 66592386 - transcript1655.chr7.nnic@AC006001.3 transcript1655.chr7.nnic transcribed_unprocessed_pseudogene 66592257,66573385,66560579,66553566 66592386,66573550,66560675,66554837 Gene ID= ENSG00000229180.6 TPM= 5.89 Transcript Type= NA chr7 66553566 66592359 66553566 66592359 - transcript1656.chr7.nnic@AC006001.3 transcript1656.chr7.nnic transcribed_unprocessed_pseudogene 66592257,66576755,66573385,66553566 66592359,66576932,66573550,66554837 Gene ID= ENSG00000229180.6 TPM= 2.26 Transcript Type= NA chr7 66553566 66592386 66553566 66592386 - transcript1657.chr7.nic@AC006001.3 transcript1657.chr7.nic transcribed_unprocessed_pseudogene 66592257,66573385,66553566 66592386,66573550,66554837 Gene ID= ENSG00000229180.6 TPM= 4.98 Transcript Type= NA chr7 66628767 66644015 66628767 66644015 + ENST00000639828.1@KCTD7 ENST00000639828.1 protein_coding 66628767,66633275,66638253,66638856 66629208,66633444,66638431,66644015 Gene ID= ENSG00000243335.9 TPM= 9.06 Transcript Type= protein_coding chr7 66740721 66811460 66740721 66811460 + transcript1665.chr7.nic@RABGEF1 transcript1665.chr7.nic protein_coding 66740721,66771883,66775227,66783675,66795511,66796776,66797374,66799323,66805140,66808886 66740792,66772078,66775393,66783841,66795592,66796892,66797506,66799414,66805396,66811460 Gene ID= ENSG00000284461.1 TPM= 3.06 Transcript Type= NA chr7 66740670 66811460 66740670 66811460 + transcript1671.chr7.nnic@RABGEF1 transcript1671.chr7.nnic protein_coding 66740670,66771883,66783700,66795511,66797374,66799323,66805140,66808886 66740792,66772039,66783841,66795592,66797506,66799414,66805396,66811460 Gene ID= ENSG00000284461.1 TPM= 3.06 Transcript Type= NA chr7 66739975 66811459 66739975 66811459 + ENST00000437078.6@RABGEF1 ENST00000437078.6 protein_coding 66739975,66771883,66775227,66795511,66797374,66799323,66805140,66808886 66740792,66772078,66775393,66795592,66797506,66799414,66805396,66811459 Gene ID= ENSG00000284461.1 TPM= 2.16 Transcript Type= protein_coding chr7 66740673 66811460 66740673 66811460 + transcript1674.chr7.nnic@RABGEF1 transcript1674.chr7.nnic protein_coding 66740673,66775227,66783675,66795511,66797374,66799323,66805140,66808886 66740792,66775393,66783841,66795592,66797506,66799414,66805396,66811460 Gene ID= ENSG00000284461.1 TPM= 3.06 Transcript Type= NA chr7 66654519 66744668 66654519 66744668 + transcript1679.chr7.nnic@RABGEF1 transcript1679.chr7.nnic protein_coding 66654519,66700769,66712167,66740157,66743779 66654626,66700849,66712224,66742416,66744668 Gene ID= ENSG00000284461.1 TPM= 1.81 Transcript Type= NA chr7 66654519 66741978 66654519 66741978 + transcript1683.chr7.nnic@RABGEF1 transcript1683.chr7.nnic protein_coding 66654519,66700769,66740157 66654626,66700849,66741978 Gene ID= ENSG00000284461.1 TPM= 1.81 Transcript Type= NA chr7 66740690 66811460 66740690 66811460 + transcript1669.chr7.nic@RABGEF1 transcript1669.chr7.nic protein_coding 66740690,66768831,66771883,66775227,66795511,66797374,66799323,66805140,66808886 66740792,66769025,66772078,66775393,66795592,66797506,66799414,66805396,66811460 Gene ID= ENSG00000154710.16 TPM= 2.16 Transcript Type= NA chr7 66740656 66811459 66740656 66811459 + ENST00000510829.6@RABGEF1 ENST00000510829.6 protein_coding 66740656,66771883,66775227,66797376,66799323,66805140,66808886 66740792,66772078,66775392,66797506,66799414,66805396,66811459 Gene ID= ENSG00000154710.16 TPM= 3.06 Transcript Type= protein_coding chr7 66740733 66811464 66740733 66811464 + ENST00000284957.9@RABGEF1 ENST00000284957.9 protein_coding 66740733,66771883,66775227,66783675,66795511,66797374,66799323,66805140,66808886 66740792,66772078,66775393,66783841,66795592,66797506,66799414,66805396,66811464 Gene ID= ENSG00000154710.16 TPM= 30.23 Transcript Type= protein_coding chr7 66921224 66958551 66921224 66958551 + transcript1691.chr7.nnic@TMEM248 transcript1691.chr7.nnic protein_coding 66921224,66927642,66941848,66944976,66948544,66950952,66953226,66955502 66921461,66927777,66942024,66945261,66948694,66951135,66953369,66958551 Gene ID= ENSG00000106609.16 TPM= 2.72 Transcript Type= NA chr7 66921225 66958551 66921225 66958551 + ENST00000341567.8@TMEM248 ENST00000341567.8 protein_coding 66921225,66941848,66944976,66948544,66950952,66953226,66955502 66921461,66942024,66945261,66948694,66951135,66953369,66958551 Gene ID= ENSG00000106609.16 TPM= 136.74 Transcript Type= protein_coding chr7 66987677 66995601 66987677 66995601 - ENST00000246868.6@SBDS ENST00000246868.6 protein_coding 66995290,66994212,66993217,66991137,66987677 66995601,66994341,66993417,66991301,66988499 Gene ID= ENSG00000126524.9 TPM= 138.55 Transcript Type= protein_coding chr7 66996815 67227925 66996815 67227925 + transcript1704.chr7.nnic@TYW1 transcript1704.chr7.nnic protein_coding 66996815,66998065,66998817,67009583,67014367,67017853,67024900,67049949,67055835,67067285,67083430,67098541,67117483,67183126,67195170,67226383 66996982,66998195,66998954,67009684,67014561,67018143,67025022,67050066,67055887,67067403,67083539,67098718,67117618,67183236,67195337,67227925 Gene ID= ENSG00000198874.12 TPM= 1.81 Transcript Type= NA chr7 66996815 67239514 66996815 67239514 + ENST00000359626.9@TYW1 ENST00000359626.9 protein_coding 66996815,66998065,66998817,67009583,67014367,67017853,67024900,67049949,67055835,67067285,67083430,67098541,67117483,67183126,67195170,67238308 66996982,66998195,66998954,67009684,67014561,67018143,67025022,67050066,67055887,67067403,67083539,67098718,67117618,67183236,67195337,67239514 Gene ID= ENSG00000198874.12 TPM= 29.43 Transcript Type= protein_coding chr7 67067403 67239517 67067403 67239517 + transcript1712.chr7.nnic@TYW1 transcript1712.chr7.nnic protein_coding 67067403,67083430,67098541,67117483,67183126,67195170,67238308 67067641,67083539,67098718,67117618,67183236,67195337,67239517 Gene ID= ENSG00000198874.12 TPM= 4.98 Transcript Type= NA chr7 67292430 67302456 67292430 67302456 - transcript1723.chr7.nnic@PMS2P4 transcript1723.chr7.nnic transcribed_unprocessed_pseudogene 67302376,67299285,67297217,67295618,67292430 67302456,67299424,67297303,67295801,67292549 Gene ID= ENSG00000067601.7 TPM= 3.62 Transcript Type= NA chr7 67302656 67320403 67302656 67320403 + transcript1719.chr7.nic@STAG3L4 transcript1719.chr7.nic transcribed_unprocessed_pseudogene 67302656,67305987,67308577,67308935,67309564,67320103 67302885,67306083,67308652,67309139,67309715,67320403 Gene ID= ENSG00000106610.14 TPM= 2.72 Transcript Type= NA chr7 67302657 67320403 67302657 67320403 + transcript1724.chr7.nic@STAG3L4 transcript1724.chr7.nic transcribed_unprocessed_pseudogene 67302657,67305987,67308577,67309564,67320103 67302885,67306083,67309139,67309715,67320403 Gene ID= ENSG00000106610.14 TPM= 1.81 Transcript Type= NA chr7 67302139 67331930 67302139 67331930 + transcript1728.chr7.nnic@STAG3L4 transcript1728.chr7.nnic transcribed_unprocessed_pseudogene 67302139,67305987,67308935,67309564,67330263 67302885,67306083,67309139,67309715,67331930 Gene ID= ENSG00000106610.14 TPM= 1.81 Transcript Type= NA chr7 67302638 67310729 67302638 67310729 + transcript1729.chr7.nic@STAG3L4 transcript1729.chr7.nic transcribed_unprocessed_pseudogene 67302638,67305987,67308935,67309564 67302885,67306083,67309139,67310729 Gene ID= ENSG00000106610.14 TPM= 2.72 Transcript Type= NA chr7 67302660 67321429 67302660 67321429 + transcript1730.chr7.nnic@STAG3L4 transcript1730.chr7.nnic transcribed_unprocessed_pseudogene 67302660,67308935,67309564,67320103 67302885,67309139,67309715,67321429 Gene ID= ENSG00000106610.14 TPM= 1.81 Transcript Type= NA chr7 67302621 67321526 67302621 67321526 + ENST00000416602.6@STAG3L4 ENST00000416602.6 transcribed_unprocessed_pseudogene 67302621,67305987,67308935,67309564,67320103 67302885,67306083,67309139,67309715,67321526 Gene ID= ENSG00000106610.14 TPM= 24.45 Transcript Type= processed_transcript chr7 69599333 70793068 69599333 70793068 + ENST00000342771.8@AUTS2 ENST00000342771.8 protein_coding 69599333,69899286,70118132,70134536,70435752,70698569,70762870,70764752,70766114,70768024,70771549,70774028,70775357,70777103,70781615,70784942,70785955,70787209,70789748 69599962,69899498,70118233,70134571,70435781,70698620,70763341,70765005,70766334,70768068,70771644,70774099,70775386,70777174,70781756,70785019,70786038,70787431,70793068 Gene ID= ENSG00000158321.15 TPM= 4.53 Transcript Type= protein_coding chr7 71335549 71713598 71335549 71713598 + ENST00000618959.1@GALNT17 ENST00000618959.1 protein_coding 71335549,71388235,71415889,71420908,71571285,71665411,71669972,71677211,71710761,71712018 71335733,71388401,71416063,71421105,71571402,71665596,71670109,71677306,71710928,71713598 Gene ID= ENSG00000185274.11 TPM= 13.58 Transcript Type= protein_coding chr7 71779492 71810495 71779492 71810495 - ENST00000405452.3@CALN1 ENST00000405452.3 protein_coding 71810336,71779492 71810495,71787902 Gene ID= ENSG00000183166.10 TPM= 6.34 Transcript Type= protein_coding chr7 72829426 72837393 72829426 72837393 + transcript1745.chr7.nic@SBDSP1 transcript1745.chr7.nic transcribed_unprocessed_pseudogene 72829426,72831602,72833764,72836577 72829783,72831798,72833928,72837393 Gene ID= ENSG00000225648.5 TPM= 6.34 Transcript Type= NA chr7 72890627 72948303 72890627 72948303 + ENST00000627934.2@POM121 ENST00000627934.2 protein_coding 72890627,72890933,72926262,72926802,72928385,72929940,72938590,72939336,72939847,72940414,72940817,72941837,72945586,72946137 72890753,72891110,72926477,72926963,72928465,72930111,72938681,72939409,72939968,72940516,72940993,72943522,72945708,72948303 Gene ID= ENSG00000196313.11 TPM= 21.73 Transcript Type= protein_coding chr7 72948294 72954723 72948294 72954723 - transcript1757.chr7.nnic@NSUN5P2 transcript1757.chr7.nnic transcribed_unprocessed_pseudogene 72954625,72953511,72953326,72952152,72950058,72949846,72949313,72949103,72948892,72948668,72948294 72954723,72954479,72953430,72952295,72950196,72949961,72949491,72949232,72948980,72948808,72948597 Gene ID= ENSG00000106133.17 TPM= 1.81 Transcript Type= NA chr7 72948298 72954790 72948298 72954790 - ENST00000388955.8@NSUN5P2 ENST00000388955.8 transcribed_unprocessed_pseudogene 72954625,72954359,72953511,72953326,72952152,72950058,72949846,72949313,72948892,72948668,72948298 72954790,72954479,72953677,72953430,72952295,72950196,72949961,72949491,72949102,72948808,72948597 Gene ID= ENSG00000106133.17 TPM= 1.81 Transcript Type= processed_transcript chr7 72948294 72954787 72948294 72954787 - transcript1765.chr7.nnic@NSUN5P2 transcript1765.chr7.nnic transcribed_unprocessed_pseudogene 72954625,72953511,72953326,72952152,72950058,72949846,72949313,72949103,72948892,72948294 72954787,72954479,72953430,72952295,72950196,72949961,72949491,72949232,72948980,72948808 Gene ID= ENSG00000106133.17 TPM= 2.72 Transcript Type= NA chr7 72948173 72954723 72948173 72954723 - transcript1767.chr7.nnic@NSUN5P2 transcript1767.chr7.nnic transcribed_unprocessed_pseudogene 72954625,72954359,72953511,72953326,72952152,72950058,72949846,72949103,72948892,72948173 72954723,72954479,72953677,72953430,72952295,72950196,72949961,72949491,72948980,72948808 Gene ID= ENSG00000106133.17 TPM= 3.62 Transcript Type= NA chr7 72948294 72954723 72948294 72954723 - transcript1768.chr7.nnic@NSUN5P2 transcript1768.chr7.nnic transcribed_unprocessed_pseudogene 72954625,72953511,72953326,72950058,72949846,72949313,72949103,72948892,72948668,72948294 72954723,72954479,72953430,72952295,72949961,72949491,72949232,72948980,72948808,72948597 Gene ID= ENSG00000106133.17 TPM= 1.81 Transcript Type= NA chr7 72948294 72954787 72948294 72954787 - transcript1774.chr7.nnic@NSUN5P2 transcript1774.chr7.nnic transcribed_unprocessed_pseudogene 72954625,72953511,72953326,72952152,72950058,72949846,72949103,72948892,72948294 72954787,72954479,72953430,72952295,72950196,72949961,72949491,72948980,72948808 Gene ID= ENSG00000106133.17 TPM= 4.53 Transcript Type= NA chr7 72948294 72954734 72948294 72954734 - transcript1779.chr7.nnic@NSUN5P2 transcript1779.chr7.nnic transcribed_unprocessed_pseudogene 72954625,72953511,72953326,72950058,72949846,72949103,72948892,72948294 72954734,72954479,72953430,72952295,72949961,72949491,72948980,72948808 Gene ID= ENSG00000106133.17 TPM= 3.62 Transcript Type= NA chr7 72948300 72954723 72948300 72954723 - transcript1787.chr7.nic@NSUN5P2 transcript1787.chr7.nic transcribed_unprocessed_pseudogene 72954625,72953511,72953326,72950058,72949846,72948892,72948300 72954723,72954479,72953430,72952295,72949961,72949491,72948808 Gene ID= ENSG00000106133.17 TPM= 1.81 Transcript Type= NA chr7 72948173 72954750 72948173 72954750 - transcript1790.chr7.nic@NSUN5P2 transcript1790.chr7.nic transcribed_unprocessed_pseudogene 72954625,72950058,72949846,72949313,72948892,72948173 72954750,72950196,72949961,72949491,72949102,72948808 Gene ID= ENSG00000106133.17 TPM= 2.72 Transcript Type= NA chr7 73154888 73207294 73154888 73207294 + transcript1801.chr7.nnic@GTF2IP4 transcript1801.chr7.nnic transcribed_processed_pseudogene 73154888,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383,73206436 73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73205458,73207294 Gene ID= ENSG00000233369.7 TPM= 9.01 Transcript Type= NA chr7 73154888 73207294 73154888 73207294 + transcript1803.chr7.nic@GTF2IP4 transcript1803.chr7.nic transcribed_processed_pseudogene 73154888,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383 73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73207294 Gene ID= ENSG00000233369.7 TPM= 45.68 Transcript Type= NA chr7 73154888 73207297 73154888 73207297 + transcript1805.chr7.nnic@GTF2IP4 transcript1805.chr7.nnic transcribed_processed_pseudogene 73154888,73175415,73176857,73179087,73180539,73182077,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383,73206152 73155343,73175525,73176922,73179270,73180597,73182148,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73205458,73207297 Gene ID= ENSG00000233369.7 TPM= 12.63 Transcript Type= NA chr7 73154938 73207283 73154938 73207283 + ENST00000544802.5@GTF2IP4 ENST00000544802.5 transcribed_processed_pseudogene 73154938,73175415,73176857,73179087,73180539,73182077,73183115,73184661,73190066,73191371,73192497,73192951,73194626,73195636,73195879,73197964,73198693,73199696,73200449,73202112,73203423,73204563,73205383,73206152 73155343,73175525,73176922,73179270,73180597,73182148,73183298,73184719,73190137,73191554,73192555,73193025,73194727,73195701,73196062,73198019,73198773,73199779,73200632,73202140,73203464,73204604,73205458,73207283 Gene ID= ENSG00000233369.7 TPM= 203.48 Transcript Type= processed_transcript chr7 73220623 73235945 73220623 73235945 + transcript1809.chr7.nnic@NCF1B transcript1809.chr7.nnic transcribed_unprocessed_pseudogene 73220623,73223878,73225711,73225886,73227409,73229567,73230153,73231811,73234614,73235189,73235669 73220717,73223956,73225786,73226051,73227464,73229689,73230260,73231890,73234718,73235334,73235945 Gene ID= ENSG00000182487.12 TPM= 1.81 Transcript Type= NA chr7 73303225 73308816 73303225 73308816 - ENST00000471461.5@NSUN5 ENST00000471461.5 protein_coding 73308698,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303225 73308816,73308553,73307502,73305097,73304862,73304404,73304036,73303740,73303529 Gene ID= ENSG00000130305.16 TPM= 1.2 Transcript Type= retained_intron chr7 73303230 73308806 73303230 73308806 - ENST00000252594.10@NSUN5 ENST00000252594.10 protein_coding 73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303230 73308806,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740 Gene ID= ENSG00000130305.16 TPM= 2.11 Transcript Type= protein_coding chr7 73303235 73308816 73303235 73308816 - ENST00000310326.8@NSUN5 ENST00000310326.8 protein_coding 73308698,73308431,73307583,73307394,73304959,73304747,73304230,73303826,73303600,73303235 73308816,73308553,73307757,73307502,73305097,73304862,73304408,73304036,73303740,73303524 Gene ID= ENSG00000130305.16 TPM= 1.2 Transcript Type= protein_coding chr7 73440398 73522272 73440398 73522272 - ENST00000339594.8@BAZ1B ENST00000339594.8 protein_coding 73521827,73510736,73508327,73498497,73492800,73489194,73476868,73470345,73469517,73466296,73465439,73462922,73459536,73450847,73449542,73447264,73443984,73442725,73442181,73440398 73522272,73510852,73508471,73498698,73492921,73489391,73478569,73470483,73469650,73466401,73465537,73463099,73459718,73450994,73449689,73447379,73444129,73442828,73442553,73441693 Gene ID= ENSG00000009954.10 TPM= 4.53 Transcript Type= protein_coding chr7 73497370 73522021 73497370 73522021 - transcript1821.chr7.nic@BAZ1B transcript1821.chr7.nic protein_coding 73521827,73510736,73508327,73497370 73522021,73510852,73508471,73498698 Gene ID= ENSG00000009954.10 TPM= 1.81 Transcript Type= NA chr7 73536356 73558002 73536356 73558002 - ENST00000223368.6@BCL7B ENST00000223368.6 protein_coding 73557487,73552167,73543548,73539882,73537934,73536356 73558002,73552242,73543644,73540052,73538013,73537390 Gene ID= ENSG00000106635.7 TPM= 104.29 Transcript Type= protein_coding chr7 73536371 73557671 73536371 73557671 - ENST00000411832.5@BCL7B ENST00000411832.5 protein_coding 73557487,73552167,73543548,73537934,73536371 73557671,73552242,73543644,73538013,73537390 Gene ID= ENSG00000106635.7 TPM= 5.13 Transcript Type= protein_coding chr7 73568932 73578791 73568932 73578791 - ENST00000305632.9@TBL2 ENST00000305632.9 protein_coding 73578420,73574383,73573938,73573320,73572844,73571189,73568932 73578791,73574513,73574122,73573471,73572970,73571341,73570972 Gene ID= ENSG00000106638.15 TPM= 143.82 Transcript Type= protein_coding chr7 73569660 73578590 73569660 73578590 - ENST00000450285.5@TBL2 ENST00000450285.5 protein_coding 73578420,73574383,73573961,73573320,73572844,73571189,73569660 73578590,73574513,73574122,73573471,73572970,73571341,73570972 Gene ID= ENSG00000106638.15 TPM= 3.53 Transcript Type= nonsense_mediated_decay chr7 73667825 73672110 73667825 73672110 + ENST00000324941.4@VPS37D ENST00000324941.4 protein_coding 73667825,73669419,73670020,73671014 73668096,73669590,73670102,73672110 Gene ID= ENSG00000176428.5 TPM= 9.06 Transcript Type= protein_coding chr7 73683568 73698220 73683568 73698220 + transcript1854.chr7.nnic@BUD23 transcript1854.chr7.nnic protein_coding 73683568,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697356,73697605,73697832 73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697516,73697694,73698220 Gene ID= ENSG00000071462.11 TPM= 2.72 Transcript Type= NA chr7 73683568 73698212 73683568 73698212 + ENST00000265758.6@BUD23 ENST00000265758.6 protein_coding 73683568,73683767,73686636,73686818,73686999,73690916,73692596,73693329,73693624,73693992,73697605,73697832 73683673,73683804,73686731,73686900,73687095,73691012,73692646,73693414,73693669,73694050,73697694,73698212 Gene ID= ENSG00000071462.11 TPM= 82.4 Transcript Type= protein_coding chr7 73699206 73719673 73699206 73719673 - transcript1864.chr7.nic@STX1A transcript1864.chr7.nic protein_coding 73719602,73709045,73708589,73705150,73704350,73704148,73703755,73702845,73700730,73699206 73719673,73709122,73708688,73705224,73704423,73704256,73703828,73702982,73700931,73700484 Gene ID= ENSG00000106089.11 TPM= 2.72 Transcript Type= NA chr7 73736092 73738798 73736092 73738798 - transcript1867.chr7.nic@ABHD11 transcript1867.chr7.nic protein_coding 73738646,73738328,73737876,73737562,73737221,73736929,73736092 73738798,73738463,73738142,73737735,73737391,73737110,73736691 Gene ID= ENSG00000106077.18 TPM= 2.26 Transcript Type= NA chr7 73736094 73738867 73736094 73738867 - ENST00000222800.7@ABHD11 ENST00000222800.7 protein_coding 73738646,73738328,73737562,73737221,73736929,73736094 73738867,73738463,73737735,73737391,73737110,73736691 Gene ID= ENSG00000106077.18 TPM= 36.67 Transcript Type= protein_coding chr7 73834590 73842535 73834590 73842535 - ENST00000297873.8@METTL27 ENST00000297873.8 protein_coding 73842490,73842018,73841070,73840414,73840031,73834590 73842535,73842144,73841198,73840549,73840120,73835002 Gene ID= ENSG00000165171.10 TPM= 1.81 Transcript Type= protein_coding chr7 74027789 74069907 74027789 74069907 + ENST00000252034.11@ELN ENST00000252034.11 protein_coding 74027789,74035364,74036555,74037707,74041216,74042614,74042984,74043118,74043879,74045222,74046188,74046696,74047675,74048142,74048503,74051750,74051924,74053163,74054716,74056271,74056672,74057640,74059886,74060140,74060376,74061101,74063153,74063310,74063621,74065694,74065944,74066732,74068657 74028269,74035414,74036584,74037739,74041251,74042706,74043034,74043168,74043920,74045293,74046217,74046767,74047716,74048201,74048556,74051839,74051983,74053309,74054769,74056435,74056713,74057696,74060047,74060184,74060501,74061139,74063224,74063369,74063695,74065732,74065997,74066776,74069907 Gene ID= ENSG00000049540.16 TPM= 1.81 Transcript Type= protein_coding chr7 74174356 74197096 74174356 74197096 + ENST00000353999.6@EIF4H ENST00000353999.6 protein_coding 74174356,74187611,74189673,74189822,74194741,74195169 74174442,74187798,74189737,74189918,74194878,74197096 Gene ID= ENSG00000106682.14 TPM= 496.24 Transcript Type= protein_coding chr7 74209418 74229831 74209418 74229831 + ENST00000460943.5@LAT2 ENST00000460943.5 protein_coding 74209418,74214822,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944 74210088,74215010,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229831 Gene ID= ENSG00000086730.16 TPM= 6.34 Transcript Type= protein_coding chr7 74209396 74229834 74209396 74229834 + ENST00000344995.9@LAT2 ENST00000344995.9 protein_coding 74209396,74215947,74216825,74219744,74219960,74220217,74220584,74220704,74221637,74223724,74224018,74224639,74228944 74210088,74216069,74216864,74219787,74220008,74220254,74220619,74220734,74221692,74223783,74224197,74224760,74229834 Gene ID= ENSG00000086730.16 TPM= 5.43 Transcript Type= protein_coding chr7 74231504 74255392 74231504 74255392 - transcript1900.chr7.nnic@RFC2 transcript1900.chr7.nnic protein_coding 74254485,74252429,74249739,74249012,74246662,74243146,74239938,74238923,74237362,74235532,74231504 74255392,74252498,74249780,74249118,74246763,74243246,74240095,74238988,74237442,74235645,74232216 Gene ID= ENSG00000049541.10 TPM= 1.81 Transcript Type= NA chr7 74231504 74254458 74231504 74254458 - ENST00000621097.4@RFC2 ENST00000621097.4 protein_coding 74254271,74252429,74249739,74246662,74243146,74239938,74238923,74237362,74235532,74231504 74254458,74252498,74249780,74246763,74243246,74240095,74238988,74237442,74235645,74232216 Gene ID= ENSG00000049541.10 TPM= 1.36 Transcript Type= protein_coding chr7 74231537 74254444 74231537 74254444 - ENST00000055077.7@RFC2 ENST00000055077.7 protein_coding 74254271,74252429,74249739,74249012,74246662,74243146,74239938,74238923,74237362,74235532,74231537 74254444,74252498,74249780,74249118,74246763,74243246,74240095,74238988,74237442,74235645,74232216 Gene ID= ENSG00000049541.10 TPM= 28.52 Transcript Type= protein_coding chr7 74289475 74405930 74289475 74405930 + ENST00000361545.9@CLIP2 ENST00000361545.9 protein_coding 74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837 74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405930 Gene ID= ENSG00000106665.15 TPM= 43.01 Transcript Type= protein_coding chr7 74289475 74405943 74289475 74405943 + ENST00000223398.10@CLIP2 ENST00000223398.10 protein_coding 74289475,74317480,74338448,74353880,74356410,74357280,74360175,74364255,74372932,74375887,74380806,74386521,74389103,74397074,74400370,74401505,74403837 74289734,74317667,74339004,74354004,74356623,74357477,74360278,74364315,74373036,74376822,74380863,74386604,74389259,74397233,74400555,74401567,74405943 Gene ID= ENSG00000106665.15 TPM= 14.04 Transcript Type= protein_coding chr7 74453790 74602590 74453790 74602590 + ENST00000265755.7@GTF2IRD1 ENST00000265755.7 protein_coding 74453790,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555393,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365 74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602590 Gene ID= ENSG00000006704.10 TPM= 6.18 Transcript Type= protein_coding chr7 74454076 74602583 74454076 74602583 + transcript1922.chr7.nic@GTF2IRD1 transcript1922.chr7.nic protein_coding 74454076,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044 74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74602583 Gene ID= ENSG00000006704.10 TPM= 3.92 Transcript Type= NA chr7 74454109 74602601 74454109 74602601 + ENST00000424337.6@GTF2IRD1 ENST00000424337.6 protein_coding 74454109,74508075,74512830,74515441,74518139,74519409,74521208,74524071,74529734,74535113,74536167,74538136,74538680,74539879,74544755,74545744,74547103,74555174,74555438,74557639,74558861,74559627,74589851,74590825,74595014,74601044,74602365 74454176,74508203,74512971,74515596,74518322,74519719,74521297,74524154,74529917,74535138,74536275,74538173,74538760,74539968,74544802,74545809,74547286,74555223,74555494,74557722,74559044,74559655,74589928,74591017,74595051,74601180,74602601 Gene ID= ENSG00000006704.10 TPM= 11.62 Transcript Type= protein_coding chr7 74657690 74760691 74657690 74760691 + transcript1938.chr7.nnic@GTF2I transcript1938.chr7.nnic protein_coding 74657690,74674095,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548 74658068,74674345,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760691 Gene ID= ENSG00000263001.5 TPM= 8.36 Transcript Type= NA chr7 74657670 74760695 74657670 74760695 + transcript1944.chr7.nic@GTF2I transcript1944.chr7.nic protein_coding 74657670,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74718879,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780 74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74718941,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74760695 Gene ID= ENSG00000263001.5 TPM= 16.06 Transcript Type= NA chr7 74657670 74760690 74657670 74760690 + transcript1947.chr7.nnic@GTF2I transcript1947.chr7.nnic protein_coding 74657670,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759832 74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760690 Gene ID= ENSG00000263001.5 TPM= 9.42 Transcript Type= NA chr7 74657670 74760695 74657670 74760695 + transcript1951.chr7.nic@GTF2I transcript1951.chr7.nic protein_coding 74657670,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780 74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74760695 Gene ID= ENSG00000263001.5 TPM= 34.17 Transcript Type= NA chr7 74657758 74760692 74657758 74760692 + ENST00000614986.4@GTF2I ENST00000614986.4 protein_coding 74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74718879,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548 74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74718941,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692 Gene ID= ENSG00000263001.5 TPM= 49.11 Transcript Type= protein_coding chr7 74657758 74760692 74657758 74760692 + ENST00000620879.4@GTF2I ENST00000620879.4 protein_coding 74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548 74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692 Gene ID= ENSG00000263001.5 TPM= 106.16 Transcript Type= protein_coding chr7 74657758 74760692 74657758 74760692 + ENST00000621734.4@GTF2I ENST00000621734.4 protein_coding 74657758,74689124,74690973,74698961,74700247,74700606,74705164,74706390,74711032,74714857,74716894,74728786,74730229,74732479,74733923,74735461,74736500,74738045,74743449,74744758,74745883,74746337,74748015,74749025,74749268,74751361,74752090,74753094,74753846,74755509,74756820,74757959,74758780,74759548 74658068,74689227,74691111,74699095,74700430,74700634,74705218,74706433,74711109,74714916,74716950,74728896,74730294,74732662,74733981,74735532,74736683,74738103,74743520,74744941,74745941,74746411,74748116,74749090,74749451,74751416,74752170,74753177,74754029,74755537,74756861,74758000,74758855,74760692 Gene ID= ENSG00000263001.5 TPM= 7.45 Transcript Type= protein_coding chr7 74773962 74789313 74773962 74789313 + ENST00000289473.8@NCF1 ENST00000289473.8 protein_coding 74773962,74777267,74779082,74779257,74780780,74782939,74783525,74785182,74787984,74788559,74789039 74774103,74777347,74779157,74779422,74780835,74783061,74783632,74785299,74788088,74788704,74789313 Gene ID= ENSG00000158517.13 TPM= 5.43 Transcript Type= protein_coding chr7 74796145 74851562 74796145 74851562 - transcript1961.chr7.nnic@GTF2IRD2 transcript1961.chr7.nnic protein_coding 74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74810896,74809108,74806934,74804777,74803298,74801970,74796145 74851562,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74810952,74809173,74807011,74804860,74803481,74802013,74798265 Gene ID= ENSG00000196275.13 TPM= 2.42 Transcript Type= NA chr7 74796145 74851561 74796145 74851561 - transcript1966.chr7.nnic@GTF2IRD2 transcript1966.chr7.nnic protein_coding 74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74809108,74806934,74804777,74803298,74801985,74796145 74851561,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74809173,74807011,74804860,74803481,74802013,74798265 Gene ID= ENSG00000196275.13 TPM= 3.32 Transcript Type= NA chr7 74818814 74851642 74818814 74851642 - transcript1969.chr7.nic@GTF2IRD2 transcript1969.chr7.nic protein_coding 74851367,74836280,74832805,74824933,74822624,74822427,74819969,74818814 74851642,74836383,74832943,74825052,74822807,74822455,74820023,74819597 Gene ID= ENSG00000196275.13 TPM= 1.81 Transcript Type= NA chr7 74796144 74851551 74796144 74851551 - ENST00000451013.6@GTF2IRD2 ENST00000451013.6 protein_coding 74851367,74836280,74832805,74824933,74822624,74822427,74819969,74819554,74812739,74810896,74809108,74806934,74804777,74803298,74801985,74796144 74851551,74836383,74832943,74825052,74822807,74822455,74820023,74819597,74812816,74810952,74809173,74807011,74804860,74803481,74802013,74798265 Gene ID= ENSG00000196275.13 TPM= 8.76 Transcript Type= protein_coding chr7 74832633 74851529 74832633 74851529 - ENST00000614386.1@GTF2IRD2 ENST00000614386.1 protein_coding 74851367,74836280,74832633 74851529,74836383,74832943 Gene ID= ENSG00000196275.13 TPM= 9.06 Transcript Type= protein_coding chr7 74882152 74890587 74882152 74890587 - transcript1972.chr7.nic@STAG3L2 transcript1972.chr7.nic transcribed_unprocessed_pseudogene 74890388,74888312,74887683,74885023,74884434,74884144,74883728,74883349,74882152 74890587,74888397,74887799,74885146,74884524,74884223,74883835,74883463,74883041 Gene ID= ENSG00000277072.4 TPM= 1.81 Transcript Type= NA chr7 74882163 74890610 74882163 74890610 - ENST00000426587.5@STAG3L2 ENST00000426587.5 transcribed_unprocessed_pseudogene 74890388,74888312,74887683,74885023,74884434,74884144,74883728,74882163 74890610,74888397,74887799,74885146,74884524,74884223,74883835,74883463 Gene ID= ENSG00000277072.4 TPM= 2.72 Transcript Type= processed_transcript chr7 74890757 74907734 74890757 74907734 + transcript1982.chr7.nnic@PMS2P5 transcript1982.chr7.nnic unprocessed_pseudogene 74890757,74894118,74896146,74897652,74905578 74890846,74894257,74896232,74897835,74907734 Gene ID= ENSG00000123965.13 TPM= 2.72 Transcript Type= NA chr7 75042183 75073793 75042183 75073793 - ENST00000610322.4@RCC1L ENST00000610322.4 protein_coding 75073414,75070640,75066664,75064582,75063292,75061207,75058588,75057529,75055901,75052711,75042183 75073793,75070769,75066792,75064648,75063343,75061291,75058769,75057616,75056074,75052796,75043109 Gene ID= ENSG00000274523.4 TPM= 189.26 Transcript Type= protein_coding chr7 75092563 75149816 75092563 75149816 + transcript2001.chr7.nnic@GTF2IRD2B transcript2001.chr7.nnic protein_coding 75092563,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694 75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143993,75149816 Gene ID= ENSG00000174428.16 TPM= 2.42 Transcript Type= NA chr7 75092563 75149817 75092563 75149817 + transcript2003.chr7.nnic@GTF2IRD2B transcript2003.chr7.nnic protein_coding 75092563,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75135001,75136785,75138950,75141103,75142482,75143950,75147694 75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75135057,75136850,75139027,75141186,75142665,75143978,75149817 Gene ID= ENSG00000174428.16 TPM= 2.42 Transcript Type= NA chr7 75092581 75149817 75092581 75149817 + ENST00000472837.5@GTF2IRD2B ENST00000472837.5 protein_coding 75092581,75108960,75112397,75120891,75123136,75123488,75125916,75126342,75133135,75135001,75136785,75138950,75141103,75142482,75143950,75147694 75092765,75109063,75112535,75121010,75123319,75123516,75125970,75126385,75133212,75135057,75136850,75139027,75141186,75142665,75143978,75149817 Gene ID= ENSG00000174428.16 TPM= 17.81 Transcript Type= protein_coding chr7 75092600 75112699 75092600 75112699 + ENST00000614064.4@GTF2IRD2B ENST00000614064.4 protein_coding 75092600,75108960,75112397 75092765,75109063,75112699 Gene ID= ENSG00000174428.16 TPM= 10.87 Transcript Type= protein_coding chr7 75156639 75172044 75156639 75172044 - ENST00000438382.2@NCF1C ENST00000438382.2 unprocessed_pseudogene 75171872,75168632,75166802,75166537,75165124,75162897,75162326,75160659,75157866,75157250,75156639 75172044,75168710,75166877,75166702,75165179,75163019,75162433,75160776,75157970,75157395,75156915 Gene ID= ENSG00000165178.9 TPM= 1.81 Transcript Type= unprocessed_pseudogene chr7 75185396 75237696 75185396 75237696 - ENST00000622829.4@GTF2IP1 ENST00000622829.4 transcribed_unprocessed_pseudogene 75237293,75217154,75215756,75213406,75212079,75210528,75209376,75207956,75202542,75201121,75200121,75199651,75197948,75196974,75196613,75194657,75193903,75192899,75192047,75190539,75189215,75188075,75187220,75185396 75237696,75217264,75215821,75213589,75212137,75210599,75209559,75208014,75202613,75201304,75200179,75199725,75198049,75197039,75196796,75194712,75193983,75192980,75192230,75190567,75189256,75188116,75187295,75186527 Gene ID= ENSG00000277053.4 TPM= 14.49 Transcript Type= processed_transcript chr7 75398097 75406153 75398097 75406153 + transcript2040.chr7.nic@TRIM73 transcript2040.chr7.nic protein_coding 75398097,75398916,75403645,75404839,75405182 75398262,75399332,75403740,75405069,75406153 Gene ID= ENSG00000178809.11 TPM= 1.81 Transcript Type= NA chr7 75398142 75405605 75398142 75405605 + ENST00000447409.6@TRIM73 ENST00000447409.6 protein_coding 75398142,75398916,75403645,75404839,75405185 75398262,75399332,75403740,75405069,75405605 Gene ID= ENSG00000178809.11 TPM= 1.81 Transcript Type= protein_coding chr7 75410332 75416791 75410332 75416791 + transcript2015.chr7.nic@NSUN5P1 transcript2015.chr7.nic transcribed_unprocessed_pseudogene 75410332,75410606,75411408,75411655,75412789,75414885,75415120,75415592,75415981,75416275 75410460,75410726,75411574,75411759,75412932,75415023,75415234,75415770,75416191,75416791 Gene ID= ENSG00000223705.9 TPM= 3.02 Transcript Type= NA chr7 75410332 75416791 75410332 75416791 + transcript2017.chr7.nic@NSUN5P1 transcript2017.chr7.nic transcribed_unprocessed_pseudogene 75410332,75410606,75411655,75412789,75414640,75414885,75415120,75415592,75415981,75416275 75410460,75411574,75411759,75412932,75414798,75415023,75415234,75415770,75416191,75416791 Gene ID= ENSG00000223705.9 TPM= 3.02 Transcript Type= NA chr7 75410332 75416791 75410332 75416791 + transcript2018.chr7.nic@NSUN5P1 transcript2018.chr7.nic transcribed_unprocessed_pseudogene 75410332,75410606,75411655,75412789,75414885,75415120,75415592,75415981,75416103,75416275 75410460,75411574,75411759,75412932,75415023,75415234,75415778,75416030,75416191,75416791 Gene ID= ENSG00000223705.9 TPM= 2.11 Transcript Type= NA chr7 75410332 75416791 75410332 75416791 + transcript2033.chr7.nic@NSUN5P1 transcript2033.chr7.nic transcribed_unprocessed_pseudogene 75410332,75410606,75411655,75412789,75415120,75415592,75416275 75410460,75411574,75411759,75415023,75415234,75416191,75416791 Gene ID= ENSG00000223705.9 TPM= 5.43 Transcript Type= NA chr7 75416785 75442652 75416785 75442652 - transcript2045.chr7.nnic@POM121C transcript2045.chr7.nnic protein_coding 75442638,75421509,75419320,75416785 75442652,75422123,75419442,75418893 Gene ID= ENSG00000272391.5 TPM= 9.96 Transcript Type= NA chr7 75422873 75426797 75422873 75426797 - transcript2046.chr7.nnic@POM121C transcript2046.chr7.nnic protein_coding 75426362,75425635,75424526,75422873 75426797,75425710,75425195,75424225 Gene ID= ENSG00000272391.5 TPM= 1.81 Transcript Type= NA chr7 75416785 75423157 75416785 75423157 - transcript2048.chr7.nic@POM121C transcript2048.chr7.nic protein_coding 75421509,75419320,75416785 75423157,75419442,75418893 Gene ID= ENSG00000272391.5 TPM= 34.41 Transcript Type= NA chr7 75507753 75528123 75507753 75528123 - ENST00000418756.5@PMS2P3 ENST00000418756.5 transcribed_unprocessed_pseudogene 75527565,75525905,75516094,75515718,75514645,75512589,75512309,75510931,75507753 75528123,75525963,75516220,75515828,75514779,75512675,75512421,75511114,75507867 Gene ID= ENSG00000127957.17 TPM= 5.43 Transcript Type= processed_transcript chr7 75533300 75738947 75533300 75738947 - ENST00000336926.10@HIP1 ENST00000336926.10 protein_coding 75738801,75599184,75592372,75592056,75586753,75582075,75581237,75573761,75568199,75563188,75562935,75562073,75561329,75559732,75558167,75557654,75556710,75556026,75555416,75554440,75554113,75553453,75548891,75547755,75546939,75545088,75544695,75542851,75541919,75539323,75533300 75738947,75599247,75592514,75592112,75586833,75582151,75581298,75573901,75568256,75563263,75563075,75562170,75561401,75559915,75558255,75557770,75556811,75556169,75555551,75554526,75554220,75553589,75549001,75547813,75547032,75545188,75544800,75542974,75541980,75539431,75538224 Gene ID= ENSG00000127946.16 TPM= 6.34 Transcript Type= protein_coding chr7 75769533 75789896 75769533 75789896 - ENST00000394905.2@CCL26 ENST00000394905.2 protein_coding 75789717,75772104,75771889,75769533 75789896,75772254,75772003,75769789 Gene ID= ENSG00000006606.8 TPM= 3.62 Transcript Type= protein_coding chr7 75878948 75888921 75878948 75888921 + ENST00000006777.10@RHBDD2 ENST00000006777.10 protein_coding 75878948,75881829,75883698,75887992 75879260,75882236,75883848,75888921 Gene ID= ENSG00000005486.16 TPM= 608.3 Transcript Type= protein_coding chr7 75915079 75986855 75915079 75986855 + ENST00000461988.5@POR ENST00000461988.5 protein_coding 75915079,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159,75986337 75915179,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986241,75986855 Gene ID= ENSG00000127948.15 TPM= 232.91 Transcript Type= protein_coding chr7 75915164 75986855 75915164 75986855 + ENST00000394893.5@POR ENST00000394893.5 protein_coding 75915164,75953989,75972413,75979451,75980339,75981048,75981517,75982224,75983520,75983738,75984777,75985058,75985579,75985923,75986159 75915179,75954180,75972461,75979579,75980488,75981172,75981606,75982322,75983636,75983856,75984958,75985207,75985849,75986068,75986855 Gene ID= ENSG00000127948.15 TPM= 24.73 Transcript Type= protein_coding chr7 75985570 75986855 75985570 75986855 + ENST00000493973.1@POR ENST00000493973.1 protein_coding 75985570,75985923,75986159,75986337 75985849,75986068,75986241,75986855 Gene ID= ENSG00000127948.15 TPM= 55.5 Transcript Type= retained_intron chr7 75986985 75994669 75986985 75994669 - transcript2089.chr7.nic@TMEM120A transcript2089.chr7.nic protein_coding 75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987360,75986985 75994669,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987419,75987285 Gene ID= ENSG00000189077.10 TPM= 9.51 Transcript Type= NA chr7 75986837 75994659 75986837 75994659 - ENST00000493111.6@TMEM120A ENST00000493111.6 protein_coding 75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986837 75994659,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987285 Gene ID= ENSG00000189077.10 TPM= 166.17 Transcript Type= protein_coding chr7 75986985 75994574 75986985 75994574 - ENST00000439537.5@TMEM120A ENST00000439537.5 protein_coding 75994490,75992439,75992144,75989165,75988421,75988252,75988083,75987923,75987718,75987538,75987360,75986985 75994574,75992557,75992260,75989224,75988516,75988341,75988148,75987984,75987810,75987602,75987428,75987223 Gene ID= ENSG00000189077.10 TPM= 14.04 Transcript Type= protein_coding chr7 75987041 75994656 75987041 75994656 - ENST00000440632.5@TMEM120A ENST00000440632.5 protein_coding 75994490,75992439,75992144,75989165,75988421,75988083,75987923,75987718,75987538,75987360,75987041 75994656,75992557,75992260,75989224,75988516,75988341,75987984,75987810,75987602,75987428,75987285 Gene ID= ENSG00000189077.10 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr7 75996338 76048014 75996338 76048014 - transcript2126.chr7.nnic@STYXL1 transcript2126.chr7.nnic protein_coding 76047812,76030421,76028642,76021851,76013742,76005259,76003758,76000890,75996338 76048014,76030524,76028703,76021992,76013887,76005404,76003855,76000954,75996599 Gene ID= ENSG00000127952.16 TPM= 6.95 Transcript Type= NA chr7 75996338 76048014 75996338 76048014 - transcript2129.chr7.nic@STYXL1 transcript2129.chr7.nic protein_coding 76047812,76030421,76028642,76021851,76013742,76005259,76003758,76000890,75996338 76048014,76030524,76028703,76021992,76013887,76005404,76003855,76001002,75996599 Gene ID= ENSG00000127952.16 TPM= 3.17 Transcript Type= NA chr7 75996338 76048014 75996338 76048014 - transcript2131.chr7.nic@STYXL1 transcript2131.chr7.nic protein_coding 76047812,76030421,76028642,76021851,76005259,76003758,76000890,75996338 76048014,76030527,76028703,76021992,76005404,76003855,76001002,75996599 Gene ID= ENSG00000127952.16 TPM= 3.17 Transcript Type= NA chr7 75996343 76048014 75996343 76048014 - transcript2132.chr7.nic@STYXL1 transcript2132.chr7.nic protein_coding 76047812,76030421,76028642,76021851,76013742,76005259,76003758,75996343 76048014,76030527,76028703,76021992,76013887,76005404,76003855,75996599 Gene ID= ENSG00000127952.16 TPM= 1.97 Transcript Type= NA chr7 75996342 76047983 75996342 76047983 - ENST00000340062.9@STYXL1 ENST00000340062.9 protein_coding 76047812,76030421,76028642,76005259,76003758,76000890,75996342 76047983,76030524,76028703,76005404,76003855,76001002,75996599 Gene ID= ENSG00000127952.16 TPM= 1.36 Transcript Type= protein_coding chr7 76048051 76049047 76048051 76049047 + ENST00000461263.2@MDH2 ENST00000461263.2 protein_coding 76048051,76048576 76048226,76049047 Gene ID= ENSG00000146701.11 TPM= 3.62 Transcript Type= protein_coding chr7 76048067 76067508 76048067 76067508 + ENST00000315758.9@MDH2 ENST00000315758.9 protein_coding 76048067,76054830,76057410,76057969,76060373,76063515,76064339,76064802,76066279 76048226,76054998,76057493,76058078,76060498,76063592,76064438,76064953,76067508 Gene ID= ENSG00000146701.11 TPM= 479.19 Transcript Type= protein_coding chr7 76048085 76067506 76048085 76067506 + ENST00000443006.5@MDH2 ENST00000443006.5 protein_coding 76048085,76057410,76057969,76060373,76063515,76064339,76064802,76066279 76048226,76057493,76058078,76060498,76063592,76064438,76064953,76067506 Gene ID= ENSG00000146701.11 TPM= 11.02 Transcript Type= protein_coding chr7 76280682 76287301 76280682 76287301 + transcript2147.chr7.nic@SRRM3 transcript2147.chr7.nic protein_coding 76280682,76282648,76282964,76283524,76285615 76281802,76282872,76283101,76283602,76287301 Gene ID= ENSG00000177679.15 TPM= 26.87 Transcript Type= NA chr7 76280629 76287291 76280629 76287291 + transcript2153.chr7.nic@SRRM3 transcript2153.chr7.nic protein_coding 76280629,76282648,76282964,76285615 76281802,76282872,76283101,76287291 Gene ID= ENSG00000177679.15 TPM= 10.26 Transcript Type= NA chr7 76282572 76287299 76282572 76287299 + transcript2158.chr7.nnic@SRRM3 transcript2158.chr7.nnic protein_coding 76282572,76282964,76283524,76285615 76282872,76283101,76283621,76287299 Gene ID= ENSG00000177679.15 TPM= 6.64 Transcript Type= NA chr7 76282614 76287288 76282614 76287288 + ENST00000612155.1@SRRM3 ENST00000612155.1 protein_coding 76282614,76282964,76283524,76285615 76282872,76283101,76283602,76287288 Gene ID= ENSG00000177679.15 TPM= 45.28 Transcript Type= retained_intron chr7 76302544 76304295 76302544 76304295 + ENST00000248553.6@HSPB1 ENST00000248553.6 protein_coding 76302544,76303802,76303984 76303076,76303865,76304295 Gene ID= ENSG00000106211.8 TPM= 1651.71 Transcript Type= protein_coding chr7 76302688 76304260 76302688 76304260 + ENST00000447574.1@HSPB1 ENST00000447574.1 protein_coding 76302688,76303984 76303865,76304260 Gene ID= ENSG00000106211.8 TPM= 16.3 Transcript Type= nonsense_mediated_decay chr7 76326794 76359031 76326794 76359031 - ENST00000307630.4@YWHAG ENST00000307630.4 protein_coding 76358722,76326794 76359031,76330233 Gene ID= ENSG00000170027.6 TPM= 33.51 Transcript Type= protein_coding chr7 76389337 76393263 76389337 76393263 - transcript2172.chr7.nnic@SSC4D transcript2172.chr7.nnic protein_coding 76393140,76391964,76389337 76393263,76392041,76390375 Gene ID= ENSG00000146700.8 TPM= 1.81 Transcript Type= NA chr7 76397518 76442071 76397518 76442071 + ENST00000336517.8@ZP3 ENST00000336517.8 protein_coding 76397518,76425052,76429515,76432927,76433470,76434038,76440250,76440475,76441842 76397797,76425276,76429633,76433030,76433647,76434155,76440341,76440611,76442071 Gene ID= ENSG00000188372.14 TPM= 6.34 Transcript Type= protein_coding chr7 76461696 76505994 76461696 76505994 + transcript2178.chr7.nic@DTX2 transcript2178.chr7.nic protein_coding 76461696,76463654,76480421,76482508,76492153,76497337,76500441,76502298,76503426,76504356,76505374 76461836,76463709,76480777,76483147,76492253,76497477,76500520,76502456,76503587,76504445,76505994 Gene ID= ENSG00000091073.19 TPM= 2.65 Transcript Type= NA chr7 76461685 76505994 76461685 76505994 + transcript2181.chr7.nic@DTX2 transcript2181.chr7.nic protein_coding 76461685,76463545,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374 76461836,76463709,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505994 Gene ID= ENSG00000091073.19 TPM= 3.71 Transcript Type= NA chr7 76461674 76505994 76461674 76505994 + transcript2183.chr7.nic@DTX2 transcript2183.chr7.nic protein_coding 76461674,76480421,76482508,76492153,76500441,76502298,76503426,76504356,76505374 76461836,76480777,76483147,76492253,76500520,76502456,76503587,76504445,76505994 Gene ID= ENSG00000091073.19 TPM= 2.81 Transcript Type= NA chr7 76461716 76505994 76461716 76505994 + ENST00000413936.6@DTX2 ENST00000413936.6 protein_coding 76461716,76480421,76482508,76492153,76497337,76500441,76502298,76503426,76504356,76505374 76461836,76480777,76483147,76492253,76497477,76500520,76502456,76503587,76504445,76505994 Gene ID= ENSG00000091073.19 TPM= 1.75 Transcript Type= protein_coding chr7 76461727 76505991 76461727 76505991 + ENST00000430490.6@DTX2 ENST00000430490.6 protein_coding 76461727,76463545,76480421,76482508,76492153,76497337,76500441,76502298,76503426,76504356,76505374 76461836,76463709,76480777,76483147,76492253,76497477,76500520,76502456,76503587,76504445,76505991 Gene ID= ENSG00000091073.19 TPM= 6.28 Transcript Type= protein_coding chr7 76609986 76627241 76609986 76627241 - ENST00000310842.8@POMZP3 ENST00000310842.8 protein_coding 76626708,76626000,76625522,76618183,76611722,76611454,76609986 76627241,76626215,76625683,76618300,76611813,76611591,76610215 Gene ID= ENSG00000146707.14 TPM= 14.49 Transcript Type= protein_coding chr7 77310752 77416600 77310752 77416600 - transcript2213.chr7.nic@GSAP transcript2213.chr7.nic protein_coding 77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77349351,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77311841,77310752 77416600,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77349404,77330367,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311940,77311449 Gene ID= ENSG00000186088.15 TPM= 9.96 Transcript Type= NA chr7 77310751 77416400 77310751 77416400 - ENST00000257626.11@GSAP ENST00000257626.11 protein_coding 77416213,77406029,77404559,77397346,77396982,77387360,77382574,77381305,77377286,77376848,77375058,77374070,77362583,77360824,77355555,77355213,77353572,77352944,77349351,77330239,77329333,77328606,77326212,77323647,77321333,77320725,77314370,77313488,77312101,77311841,77310751 77416400,77406105,77404615,77397415,77397035,77387448,77382643,77381354,77377390,77376907,77375101,77374155,77362660,77360901,77355647,77355430,77353641,77353026,77349404,77330367,77329391,77328637,77326273,77323742,77321403,77320819,77314489,77313549,77312202,77311940,77311449 Gene ID= ENSG00000186088.15 TPM= 19.02 Transcript Type= protein_coding chr7 77537275 77640071 77537275 77640071 + ENST00000248594.10@PTPN12 ENST00000248594.10 protein_coding 77537275,77571078,77581427,77583555,77585543,77592185,77597842,77600664,77607235,77610765,77610948,77618480,77626705,77632348,77635782,77637018,77638624,77639219 77537645,77571186,77581503,77583650,77585581,77592256,77597901,77600806,77607301,77610842,77611046,77618565,77627675,77632425,77635849,77637048,77638731,77640071 Gene ID= ENSG00000127947.15 TPM= 8.15 Transcript Type= protein_coding chr7 77657665 77696253 77657665 77696253 - transcript2227.chr7.nic@APTR transcript2227.chr7.nic lincRNA 77695896,77685202,77661198,77657665 77696253,77685328,77661333,77659318 Gene ID= ENSG00000214293.8 TPM= 2.72 Transcript Type= NA chr7 79454018 79471196 79454018 79471196 + transcript2242.chr7.nic@MAGI2-AS3 transcript2242.chr7.nic processed_transcript 79454018,79454866,79458847,79470594,79470783 79454244,79455007,79458999,79470679,79471196 Gene ID= ENSG00000234456.7 TPM= 1.81 Transcript Type= NA chr7 79453596 79471205 79453596 79471205 + transcript2253.chr7.nic@MAGI2-AS3 transcript2253.chr7.nic processed_transcript 79453596,79458847,79470783 79453655,79458999,79471205 Gene ID= ENSG00000234456.7 TPM= 1.81 Transcript Type= NA chr7 79453960 79471208 79453960 79471208 + ENST00000414797.5@MAGI2-AS3 ENST00000414797.5 processed_transcript 79453960,79454886,79458847,79470594,79470783 79454244,79455007,79458999,79470679,79471208 Gene ID= ENSG00000234456.7 TPM= 5.43 Transcript Type= antisense_RNA chr7 80134788 80219402 80134788 80219402 + ENST00000351004.7@GNAI1 ENST00000351004.7 protein_coding 80134788,80188951,80189090,80199225,80203704,80210969,80212716,80217303 80135278,80188993,80189231,80199382,80203832,80211098,80212869,80219402 Gene ID= ENSG00000127955.15 TPM= 208.28 Transcript Type= protein_coding chr7 80624081 80677005 80624081 80677005 + transcript2263.chr7.nic@CD36 transcript2263.chr7.nic protein_coding 80624081,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983 80624190,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80677005 Gene ID= ENSG00000135218.17 TPM= 3.32 Transcript Type= NA chr7 80646222 80679276 80646222 80679276 + transcript2267.chr7.nic@CD36 transcript2267.chr7.nic protein_coding 80646222,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384 80646359,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679276 Gene ID= ENSG00000135218.17 TPM= 13.58 Transcript Type= NA chr7 80646273 80679269 80646273 80679269 + transcript2271.chr7.nic@CD36 transcript2271.chr7.nic protein_coding 80646273,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676108 80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679269 Gene ID= ENSG00000135218.17 TPM= 2.72 Transcript Type= NA chr7 80646273 80679276 80646273 80679276 + transcript2273.chr7.nic@CD36 transcript2273.chr7.nic protein_coding 80646273,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384 80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80679276 Gene ID= ENSG00000135218.17 TPM= 6.34 Transcript Type= NA chr7 80638676 80674416 80638676 80674416 + ENST00000394788.7@CD36 ENST00000394788.7 protein_coding 80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983 80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416 Gene ID= ENSG00000135218.17 TPM= 5.13 Transcript Type= protein_coding chr7 80638676 80677008 80638676 80677008 + ENST00000447544.6@CD36 ENST00000447544.6 protein_coding 80638676,80646088,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983,80676384 80638746,80646181,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674147,80677008 Gene ID= ENSG00000135218.17 TPM= 4.53 Transcript Type= protein_coding chr7 80646329 80674416 80646329 80674416 + ENST00000432207.5@CD36 ENST00000432207.5 protein_coding 80646329,80646652,80656540,80661063,80662990,80664406,80666443,80669953,80670977,80671922,80672770,80673355,80673983 80646359,80646860,80656700,80661210,80663169,80664497,80666489,80670022,80671164,80672040,80672843,80673409,80674416 Gene ID= ENSG00000135218.17 TPM= 9.66 Transcript Type= protein_coding chr7 81699006 81770198 81699006 81770198 - ENST00000222390.9@HGF ENST00000222390.9 protein_coding 81769884,81762707,81758692,81757189,81752120,81745000,81743353,81729605,81725890,81720745,81717232,81711481,81710147,81707290,81706287,81705647,81705390,81699006 81770198,81762872,81758804,81757303,81752262,81745120,81743471,81729779,81726017,81720847,81717365,81711519,81710243,81707364,81706427,81705753,81705535,81702757 Gene ID= ENSG00000019991.15 TPM= 10.87 Transcript Type= protein_coding chr7 81754739 81770064 81754739 81770064 - transcript2282.chr7.nic@HGF transcript2282.chr7.nic protein_coding 81769884,81762707,81758692,81754739 81770064,81762872,81758804,81757303 Gene ID= ENSG00000019991.15 TPM= 1.81 Transcript Type= NA chr7 81946445 82443829 81946445 82443829 - transcript2284.chr7.nnic@CACNA2D1 transcript2284.chr7.nnic protein_coding 82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946445 82443829,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997235,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508 Gene ID= ENSG00000153956.15 TPM= 4.53 Transcript Type= NA chr7 81946445 82443810 81946445 82443810 - transcript2287.chr7.nic@CACNA2D1 transcript2287.chr7.nic protein_coding 82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,82001659,81997179,81994868,81991185,81984635,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946445 82443810,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,82001715,81997235,81994939,81991246,81984711,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508 Gene ID= ENSG00000153956.15 TPM= 1.81 Transcript Type= NA chr7 81999629 82443809 81999629 82443809 - transcript2289.chr7.nnic@CACNA2D1 transcript2289.chr7.nnic protein_coding 82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81999629 82443809,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,82002433 Gene ID= ENSG00000153956.15 TPM= 2.72 Transcript Type= NA chr7 82297620 82443950 82297620 82443950 - transcript2292.chr7.nnic@CACNA2D1 transcript2292.chr7.nnic protein_coding 82443365,82349568,82335135,82297620 82443950,82349649,82335251,82300151 Gene ID= ENSG00000153956.15 TPM= 1.81 Transcript Type= NA chr7 81946444 82443798 81946444 82443798 - ENST00000356860.7@CACNA2D1 ENST00000356860.7 protein_coding 82443365,82349568,82335135,82170550,82136635,82117044,82084769,82066455,82064304,82060428,82038077,82032797,82014401,82013461,82012154,82007679,82005765,82005423,81997179,81994868,81991185,81984635,81983314,81982567,81974455,81971777,81970675,81969881,81968887,81967596,81967169,81965594,81964207,81964056,81962440,81961894,81959720,81959275,81946444 82443798,82349649,82335251,82170609,82136676,82117173,82084900,82066524,82064354,82060527,82038235,82032901,82014479,82013510,82012243,82007756,82005839,82005497,81997250,81994939,81991246,81984711,81983334,81982627,81974552,81971864,81970737,81969984,81968973,81967663,81967207,81965665,81964359,81964108,81962495,81962023,81959829,81959357,81950508 Gene ID= ENSG00000153956.15 TPM= 5.43 Transcript Type= protein_coding chr7 84995558 85187054 84995558 85187054 - transcript2295.chr7.nic@SEMA3D transcript2295.chr7.nic protein_coding 85186678,85153608,85121741,85097805,85081517,85072962,85068191,85065424,85055717,85042171,85040673,85036889,85022391,85020233,85018252,85015059,85012782,85006802,84995558 85187054,85153739,85121931,85097965,85081579,85073081,85068284,85065552,85055859,85042285,85040742,85037033,85022613,85020321,85018293,85015216,85012846,85006941,84999865 Gene ID= ENSG00000153993.13 TPM= 4.53 Transcript Type= NA chr7 86877817 87040240 86877817 87040240 - transcript2298.chr7.nnic@KIAA1324L transcript2298.chr7.nnic protein_coding 87039756,86964904,86947727,86944899,86942018,86940010,86938808,86938126,86926736,86925528,86919220,86918442,86914723,86912941,86912072,86909812,86908447,86907670,86897506,86892922,86891724,86877817 87040240,86965024,86947922,86945046,86942104,86940115,86938960,86938214,86926916,86925656,86919310,86918544,86914860,86913204,86912245,86910001,86908543,86907771,86897632,86893100,86891889,86880530 Gene ID= ENSG00000164659.14 TPM= 3.62 Transcript Type= NA chr7 86876906 87059699 86876906 87059699 - ENST00000450689.6@KIAA1324L ENST00000450689.6 protein_coding 87059325,86964904,86947727,86944899,86942018,86940010,86938808,86938126,86926736,86925528,86919220,86918442,86914723,86912941,86912072,86909812,86908447,86907670,86897506,86892922,86891724,86876906 87059699,86965024,86947922,86945046,86942104,86940115,86938960,86938214,86926916,86925656,86919310,86918544,86914860,86913204,86912245,86910001,86908543,86907771,86897632,86893100,86891889,86880530 Gene ID= ENSG00000164659.14 TPM= 6.34 Transcript Type= protein_coding chr7 87152361 87196332 87152361 87196332 + ENST00000331242.11@DMTF1 ENST00000331242.11 protein_coding 87152361,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182228,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031 87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196332 Gene ID= ENSG00000135164.18 TPM= 3.62 Transcript Type= protein_coding chr7 87152412 87196325 87152412 87196325 + ENST00000579677.5@DMTF1 ENST00000579677.5 protein_coding 87152412,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182056,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031 87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196325 Gene ID= ENSG00000135164.18 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr7 87152412 87196325 87152412 87196325 + ENST00000447863.5@DMTF1 ENST00000447863.5 protein_coding 87152412,87163495,87164934,87166483,87170995,87173535,87174593,87179545,87181309,87182017,87184397,87185829,87188092,87190945,87193198,87193725,87194684,87195031 87152555,87163617,87165050,87166605,87171089,87173649,87174669,87179702,87181341,87182337,87184625,87185980,87188301,87191027,87193353,87194102,87194828,87196325 Gene ID= ENSG00000135164.18 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr7 87195990 87220558 87195990 87220558 - transcript2314.chr7.nic@TMEM243 transcript2314.chr7.nic protein_coding 87220217,87219426,87199007,87197941,87195990 87220558,87219718,87199057,87198045,87196758 Gene ID= ENSG00000135185.11 TPM= 2.72 Transcript Type= NA chr7 87196162 87220587 87196162 87220587 - ENST00000433078.5@TMEM243 ENST00000433078.5 protein_coding 87220361,87219426,87199007,87197941,87196162 87220587,87219718,87199057,87198045,87196758 Gene ID= ENSG00000135185.11 TPM= 11.32 Transcript Type= protein_coding chr7 87196160 87219733 87196160 87219733 - ENST00000257637.7@TMEM243 ENST00000257637.7 protein_coding 87219426,87199007,87197941,87196160 87219733,87199057,87198045,87196758 Gene ID= ENSG00000135185.11 TPM= 12.22 Transcript Type= protein_coding chr7 87325306 87345534 87325306 87345534 - transcript2321.chr7.nnic@TP53TG1 transcript2321.chr7.nnic lincRNA 87345043,87341523,87329935,87325306 87345534,87341684,87330094,87325444 Gene ID= ENSG00000182165.17 TPM= 2.72 Transcript Type= NA chr7 87325350 87345486 87325350 87345486 - ENST00000421293.1@TP53TG1 ENST00000421293.1 lincRNA 87345305,87341523,87325350 87345486,87341684,87325444 Gene ID= ENSG00000182165.17 TPM= 5.43 Transcript Type= lincRNA chr7 87345695 87399795 87345695 87399795 + ENST00000331536.7@CROT ENST00000331536.7 protein_coding 87345695,87346340,87349048,87359206,87361390,87361728,87369376,87375632,87375828,87377349,87381910,87382074,87382413,87391589,87392566,87392730,87392948,87398524 87345767,87346430,87349183,87359330,87361571,87361852,87369484,87375725,87375953,87377450,87381993,87382181,87382543,87391712,87392644,87392823,87393067,87399795 Gene ID= ENSG00000005469.11 TPM= 24.45 Transcript Type= protein_coding chr7 87345693 87360116 87345693 87360116 + ENST00000412227.6@CROT ENST00000412227.6 protein_coding 87345693,87346340,87349048,87359206 87345767,87346430,87349183,87360116 Gene ID= ENSG00000005469.11 TPM= 2.72 Transcript Type= protein_coding chr7 87402047 87475733 87402047 87475733 - transcript2330.chr7.nnic@ABCB4 transcript2330.chr7.nnic protein_coding 87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418852,87418537,87417312,87413617,87411893,87409236,87408037,87406288,87403135,87402047 87475733,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87419019,87418620,87417515,87413717,87412033,87409392,87408234,87406494,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 2.72 Transcript Type= NA chr7 87402034 87475898 87402034 87475898 - transcript2333.chr7.nnic@ABCB4 transcript2333.chr7.nnic protein_coding 87475771,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87411893,87409236,87408037,87406288,87403135,87402034 87475898,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87412033,87409392,87408234,87406494,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 3.62 Transcript Type= NA chr7 87400393 87475720 87400393 87475720 - transcript2339.chr7.nnic@ABCB4 transcript2339.chr7.nnic protein_coding 87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87419998,87418537,87417312,87413617,87411893,87409236,87408037,87406288,87403135,87400393 87475720,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87420075,87418620,87417515,87413717,87412033,87409392,87408234,87406494,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 2.9 Transcript Type= NA chr7 87402045 87476155 87402045 87476155 - transcript2343.chr7.nnic@ABCB4 transcript2343.chr7.nnic protein_coding 87475771,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87409236,87408037,87406288,87403135,87402045 87476155,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87409392,87408234,87406494,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 3.62 Transcript Type= NA chr7 87402045 87475733 87402045 87475733 - transcript2345.chr7.nic@ABCB4 transcript2345.chr7.nic protein_coding 87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87409236,87408037,87406288,87403135,87402045 87475733,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87409392,87408234,87406515,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 1.99 Transcript Type= NA chr7 87402045 87475659 87402045 87475659 - ENST00000359206.7@ABCB4 ENST00000359206.7 protein_coding 87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87411893,87409236,87408037,87406288,87403135,87402045 87475659,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87412033,87409392,87408234,87406494,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 2.9 Transcript Type= protein_coding chr7 87402045 87475703 87402045 87475703 - ENST00000358400.7@ABCB4 ENST00000358400.7 protein_coding 87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87409236,87408037,87406288,87403135,87402045 87475703,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87409392,87408234,87406494,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 11.05 Transcript Type= protein_coding chr7 87402049 87475739 87402049 87475739 - ENST00000265723.8@ABCB4 ENST00000265723.8 protein_coding 87475634,87475386,87472621,87462758,87454535,87452944,87451623,87449968,87447034,87444862,87443663,87443319,87440199,87439667,87431404,87426750,87423906,87422121,87419998,87418537,87417312,87413617,87411893,87409236,87408037,87406288,87403135,87402049 87475739,87475471,87472675,87462908,87454592,87453135,87451794,87450092,87447205,87444975,87443773,87443444,87440402,87439837,87431565,87426920,87424052,87422225,87420075,87418620,87417515,87413717,87412033,87409392,87408234,87406515,87403281,87402302 Gene ID= ENSG00000005471.15 TPM= 2.9 Transcript Type= protein_coding chr7 87501172 87601007 87501172 87601007 - transcript2354.chr7.nic@ABCB1 transcript2354.chr7.nic protein_coding 87600755,87600117,87595766,87585512,87570172,87566070,87561263,87553761,87550725,87550468,87550171,87549851,87549348,87545863,87544823,87544129,87541357,87539268,87536458,87531294,87520776,87519326,87516509,87515231,87509275,87505897,87501172 87601007,87600190,87595814,87585680,87570223,87566241,87561387,87553932,87550838,87550578,87550296,87550054,87549518,87546024,87544999,87544275,87541464,87539345,87536541,87531497,87520876,87519466,87516665,87515428,87509481,87506043,87504449 Gene ID= ENSG00000085563.14 TPM= 29.81 Transcript Type= NA chr7 87628454 87830456 87628454 87830456 + ENST00000493037.5@RUNDC3B ENST00000493037.5 protein_coding 87628454,87650822,87700421,87710570,87739791,87741499,87770581,87777798,87816141,87829885 87628945,87650937,87700554,87710655,87739880,87741579,87770749,87777955,87816262,87830456 Gene ID= ENSG00000105784.15 TPM= 3.62 Transcript Type= protein_coding chr7 87833563 87876468 87833563 87876468 - transcript2372.chr7.nic@SLC25A40 transcript2372.chr7.nic protein_coding 87876096,87860572,87860072,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87836730,87833563 87876468,87860640,87860169,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836810,87836361 Gene ID= ENSG00000075303.12 TPM= 11.32 Transcript Type= NA chr7 87834501 87876277 87834501 87876277 - transcript2376.chr7.nic@SLC25A40 transcript2376.chr7.nic protein_coding 87876096,87860572,87858631,87856292,87854204,87849881,87847853,87846949,87843754,87841633,87834501 87876277,87860640,87858751,87856351,87854310,87849948,87847977,87847122,87843863,87841714,87836361 Gene ID= ENSG00000075303.12 TPM= 2.26 Transcript Type= NA chr7 87876229 87909541 87876229 87909541 + ENST00000265728.5@DBF4 ENST00000265728.5 protein_coding 87876229,87878053,87884979,87886844,87887329,87887983,87896474,87897294,87900221,87900764,87904292,87907188 87876778,87878225,87885158,87886894,87887398,87888059,87896510,87897339,87900349,87900878,87904416,87909541 Gene ID= ENSG00000006634.7 TPM= 9.96 Transcript Type= protein_coding chr7 87934143 88202889 87934143 88202889 + ENST00000398204.8@ADAM22 ENST00000398204.8 protein_coding 87934143,87935026,87978336,88075626,88108176,88114584,88116745,88125589,88128602,88130388,88131269,88132867,88134329,88135980,88143026,88145125,88145415,88148977,88150981,88151257,88153221,88155887,88163012,88165832,88168137,88171544,88181505,88181958,88193116,88196471 87934550,87935186,87978412,88075692,88108258,88114647,88116814,88125659,88128676,88130459,88131435,88132951,88134419,88136031,88143125,88145196,88145507,88149057,88151031,88151320,88153326,88156006,88163180,88165946,88168227,88171561,88181605,88182024,88193239,88202889 Gene ID= ENSG00000008277.14 TPM= 8.15 Transcript Type= protein_coding chr7 88205118 88220079 88205118 88220079 - ENST00000265729.6@SRI ENST00000265729.6 protein_coding 88219976,88218859,88217122,88210882,88209983,88209339,88208507,88205118 88220079,88218942,88217191,88210925,88210130,88209452,88208565,88206504 Gene ID= ENSG00000075142.13 TPM= 199.22 Transcript Type= protein_coding chr7 88276430 88306896 88276430 88306896 - transcript2394.chr7.nic@STEAP4 transcript2394.chr7.nic protein_coding 88306792,88290916,88283814,88282641,88280915,88276430 88306896,88291014,88284271,88283168,88281079,88279628 Gene ID= ENSG00000127954.12 TPM= 49.8 Transcript Type= NA chr7 90154375 90164827 90154375 90164827 + ENST00000297205.6@STEAP1 ENST00000297205.6 protein_coding 90154375,90159758,90160805,90161914,90164477 90154543,90159872,90161317,90162078,90164827 Gene ID= ENSG00000164647.8 TPM= 2.72 Transcript Type= protein_coding chr7 90211686 90237678 90211686 90237678 + ENST00000394621.6@STEAP2 ENST00000394621.6 protein_coding 90211686,90216491,90225050,90226971,90229872,90232337 90212045,90216603,90225574,90227498,90230036,90237678 Gene ID= ENSG00000157214.13 TPM= 2.72 Transcript Type= protein_coding chr7 90211686 90237631 90211686 90237631 + ENST00000287908.7@STEAP2 ENST00000287908.7 protein_coding 90211686,90225050,90226971,90229872,90232337 90212045,90225574,90227498,90230036,90237631 Gene ID= ENSG00000157214.13 TPM= 2.72 Transcript Type= protein_coding chr7 90245174 90311063 90245174 90311063 + ENST00000389297.8@CFAP69 ENST00000389297.8 protein_coding 90245174,90255423,90258098,90261947,90265301,90268286,90271526,90271781,90273987,90277073,90277213,90279677,90282892,90286281,90288234,90297749,90299867,90303969,90304744,90306901,90307768,90309263,90310068 90245544,90255482,90258163,90262056,90265377,90268384,90271675,90271958,90274110,90277121,90277334,90279893,90283056,90286399,90288352,90297830,90300059,90304106,90304820,90307098,90307854,90309367,90311063 Gene ID= ENSG00000105792.19 TPM= 2.72 Transcript Type= protein_coding chr7 90346676 90391455 90346676 90391455 + ENST00000222511.10@GTPBP10 ENST00000222511.10 protein_coding 90346676,90352816,90354458,90355086,90372155,90374302,90377507,90378134,90382956,90384892 90346774,90353009,90354549,90355230,90372228,90374354,90377614,90378211,90383079,90391455 Gene ID= ENSG00000105793.15 TPM= 1.81 Transcript Type= protein_coding chr7 90346665 90385890 90346665 90385890 + ENST00000257659.12@GTPBP10 ENST00000257659.12 protein_coding 90346665,90352816,90372155,90374302,90377507,90378134,90382956,90384892 90346774,90353009,90372228,90374354,90377614,90378211,90383079,90385890 Gene ID= ENSG00000105793.15 TPM= 4.53 Transcript Type= protein_coding chr7 90403386 90415954 90403386 90415954 + ENST00000287916.8@CLDN12 ENST00000287916.8 protein_coding 90403386,90405519,90412644 90403549,90405608,90415954 Gene ID= ENSG00000157224.15 TPM= 34.41 Transcript Type= protein_coding chr7 90403467 90415954 90403467 90415954 + ENST00000394605.2@CLDN12 ENST00000394605.2 protein_coding 90403467,90405519,90412644 90403549,90405612,90415954 Gene ID= ENSG00000157224.15 TPM= 6.34 Transcript Type= protein_coding chr7 91872891 91880720 91872891 91880720 - ENST00000351870.7@MTERF1 ENST00000351870.7 protein_coding 91880657,91880055,91872891 91880720,91880113,91874764 Gene ID= ENSG00000127989.13 TPM= 9.06 Transcript Type= protein_coding chr7 91940867 92110673 91940867 92110673 + ENST00000356239.7@AKAP9 ENST00000356239.7 protein_coding 91940867,91973711,91980289,91992158,91992885,91994621,91995603,92000848,92012429,92014249,92016129,92017017,92022238,92022814,92029895,92031512,92038419,92040674,92042046,92042668,92045008,92052726,92061260,92062274,92065231,92066427,92070030,92070905,92076855,92077696,92079079,92082522,92083170,92084640,92084819,92085495,92086228,92089385,92093097,92095023,92096689,92097586,92098109,92099687,92100856,92102594,92105678,92107293,92108494,92110122 91941147,91973968,91980333,91992211,91993055,91994776,91995800,92003235,92012642,92014328,92016267,92017102,92022352,92023009,92029991,92031604,92038772,92040898,92042186,92042771,92045213,92052958,92061422,92062486,92065463,92066546,92070206,92071009,92077007,92077875,92080152,92082662,92083655,92084703,92084940,92085686,92086416,92089529,92093316,92095173,92097357,92097794,92098214,92099869,92101056,92102826,92105763,92107422,92108633,92110673 Gene ID= ENSG00000127914.16 TPM= 3.62 Transcript Type= protein_coding chr7 92112151 92134530 92112151 92134530 - ENST00000003100.12@CYP51A1 ENST00000003100.12 protein_coding 92134173,92131774,92128880,92127505,92126253,92123734,92123120,92118520,92117044,92112151 92134530,92131872,92129056,92127631,92126427,92123853,92123315,92118615,92117212,92113843 Gene ID= ENSG00000001630.15 TPM= 214.61 Transcript Type= protein_coding chr7 92199420 92245936 92199420 92245936 - transcript2443.chr7.nic@KRIT1 transcript2443.chr7.nic protein_coding 92245906,92244902,92244002,92242034,92240993,92237667,92236413,92235403,92234808,92234449,92226526,92225720,92222822,92221902,92214611,92213892,92213195,92201307,92199420 92245936,92245171,92244149,92242137,92241152,92237759,92236542,92235646,92234923,92234592,92226682,92225827,92222978,92222053,92214777,92213979,92213401,92201423,92200804 Gene ID= ENSG00000001631.15 TPM= 4.98 Transcript Type= NA chr7 92200016 92245920 92200016 92245920 - transcript2452.chr7.nic@KRIT1 transcript2452.chr7.nic protein_coding 92245427,92242034,92240993,92237667,92236413,92235403,92234808,92234449,92226526,92225720,92222822,92221902,92214611,92213892,92213195,92201307,92200016 92245920,92242137,92241152,92237759,92236542,92235646,92234923,92234592,92226682,92225827,92222978,92222053,92214777,92213979,92213401,92201423,92200804 Gene ID= ENSG00000001631.15 TPM= 4.98 Transcript Type= NA chr7 92245974 92401382 92245974 92401382 + transcript2433.chr7.nnic@ANKIB1 transcript2433.chr7.nnic protein_coding 92245974,92246214,92294889,92307359,92319330,92327783,92343024,92344978,92350950,92352476,92362185,92371477,92386509,92387798,92387975,92389971,92391166,92392241,92396365,92397723,92398212 92246098,92246519,92295166,92307656,92319512,92327900,92343232,92345066,92351094,92352642,92362273,92371607,92386643,92387884,92388041,92390116,92391344,92392292,92396476,92397859,92401382 Gene ID= ENSG00000001629.9 TPM= 3.17 Transcript Type= NA chr7 92447453 92458836 92447453 92458836 + ENST00000287957.3@GATAD1 ENST00000287957.3 protein_coding 92447453,92448752,92450701,92454502,92456372 92447978,92448877,92450760,92454685,92458836 Gene ID= ENSG00000157259.6 TPM= 34.41 Transcript Type= protein_coding chr7 92487022 92528538 92487022 92528538 - transcript2465.chr7.nic@PEX1 transcript2465.chr7.nic protein_coding 92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92506994,92506248,92504732,92503041,92501890,92501507,92499704,92496713,92494487,92494293,92492953,92491272,92489714,92489293,92487022 92528538,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92507126,92506344,92504902,92503195,92502079,92501673,92499838,92496777,92494629,92494396,92493129,92491502,92489911,92489423,92487541 Gene ID= ENSG00000127980.15 TPM= 2.72 Transcript Type= NA chr7 92487022 92528538 92487022 92528538 - transcript2467.chr7.nic@PEX1 transcript2467.chr7.nic protein_coding 92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92506994,92506248,92504732,92503041,92501507,92499704,92496713,92494487,92492953,92491272,92489714,92489293,92487022 92528538,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92507126,92506344,92504902,92503195,92502079,92499838,92496777,92494629,92494396,92491502,92489911,92489423,92487541 Gene ID= ENSG00000127980.15 TPM= 2.72 Transcript Type= NA chr7 92510867 92528538 92510867 92528538 - transcript2469.chr7.nic@PEX1 transcript2469.chr7.nic protein_coding 92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510867 92528538,92522245,92519078,92518255,92518042,92513967,92511703,92511047 Gene ID= ENSG00000127980.15 TPM= 1.81 Transcript Type= NA chr7 92487020 92528531 92487020 92528531 - ENST00000248633.8@PEX1 ENST00000248633.8 protein_coding 92528307,92522102,92518995,92518141,92517276,92513848,92511580,92510944,92509329,92506994,92506248,92504732,92503041,92501890,92501507,92499704,92496713,92494487,92494293,92492953,92491272,92489714,92489293,92487020 92528531,92522245,92519078,92518255,92518042,92513967,92511703,92511047,92509411,92507126,92506344,92504902,92503195,92502079,92501673,92499838,92496777,92494629,92494396,92493129,92491502,92489911,92489423,92487541 Gene ID= ENSG00000127980.15 TPM= 18.11 Transcript Type= protein_coding chr7 92528773 92538005 92528773 92538005 + ENST00000481551.5@RBM48 ENST00000481551.5 protein_coding 92528773,92529476,92532404,92534402 92528924,92529666,92532549,92538005 Gene ID= ENSG00000127993.15 TPM= 2.72 Transcript Type= protein_coding chr7 92528773 92537534 92528773 92537534 + ENST00000265732.9@RBM48 ENST00000265732.9 protein_coding 92528773,92529476,92532404,92534402,92536851 92528924,92529666,92532549,92534970,92537534 Gene ID= ENSG00000127993.15 TPM= 9.96 Transcript Type= protein_coding chr7 92560779 92590409 92560779 92590409 - transcript2479.chr7.nnic@FAM133B transcript2479.chr7.nnic protein_coding 92590268,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92566014,92560779 92590409,92581603,92579395,92578393,92578182,92577679,92577195,92575821,92569915,92566061,92562368 Gene ID= ENSG00000234545.7 TPM= 3.62 Transcript Type= NA chr7 92560779 92590409 92560779 92590409 - transcript2482.chr7.nic@FAM133B transcript2482.chr7.nic protein_coding 92590268,92581506,92579317,92578319,92577655,92577103,92575771,92569823,92566014,92560779 92590409,92581603,92579395,92578393,92578182,92577195,92575821,92569915,92566061,92562368 Gene ID= ENSG00000234545.7 TPM= 4.53 Transcript Type= NA chr7 92560799 92590409 92560799 92590409 - transcript2483.chr7.nic@FAM133B transcript2483.chr7.nic protein_coding 92590268,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92560799 92590409,92581603,92579395,92578393,92578182,92577717,92577195,92575821,92569915,92562368 Gene ID= ENSG00000234545.7 TPM= 1.81 Transcript Type= NA chr7 92561103 92590394 92561103 92590394 - ENST00000445716.5@FAM133B ENST00000445716.5 protein_coding 92590268,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92566014,92561103 92590394,92581603,92579395,92578393,92578182,92577717,92577195,92575821,92569915,92566061,92562368 Gene ID= ENSG00000234545.7 TPM= 14.49 Transcript Type= protein_coding chr7 92561137 92590329 92561137 92590329 - ENST00000415397.6@FAM133B ENST00000415397.6 protein_coding 92590268,92581506,92579317,92578319,92578150,92577655,92577103,92575771,92569823,92566010,92561137 92590329,92581603,92579395,92578393,92578182,92577676,92577195,92575821,92569915,92566061,92562368 Gene ID= ENSG00000234545.7 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr7 93232340 93361121 93232340 93361121 + ENST00000544910.5@VPS50 ENST00000544910.5 protein_coding 93232340,93239866,93246102,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317 93232500,93239934,93246129,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93361121 Gene ID= ENSG00000004766.15 TPM= 3.32 Transcript Type= protein_coding chr7 93232356 93359025 93232356 93359025 + transcript2487.chr7.nnic@VPS50 transcript2487.chr7.nnic protein_coding 93232356,93239866,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93260717,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317 93232500,93239934,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93261813,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93359025 Gene ID= ENSG00000004766.15 TPM= 3.32 Transcript Type= NA chr7 93232340 93359026 93232340 93359026 + ENST00000305866.9@VPS50 ENST00000305866.9 protein_coding 93232340,93239866,93252653,93253860,93256509,93257394,93258159,93258357,93259550,93271220,93272635,93276165,93291703,93294545,93296742,93297145,93303460,93305828,93308824,93311166,93323611,93334117,93341427,93348711,93349875,93353640,93355891,93358317 93232500,93239934,93252775,93253931,93256562,93257464,93258276,93258392,93259632,93271262,93272733,93276305,93291835,93294636,93296836,93297243,93303550,93306004,93308942,93311272,93323732,93334197,93341575,93348807,93350033,93353761,93356080,93359026 Gene ID= ENSG00000004766.15 TPM= 14.19 Transcript Type= protein_coding chr7 93885397 93890991 93885397 93890991 - ENST00000222543.9@TFPI2 ENST00000222543.9 protein_coding 93890591,93890137,93889035,93887261,93885397 93890991,93890319,93889223,93887431,93886896 Gene ID= ENSG00000105825.11 TPM= 93.27 Transcript Type= protein_coding chr7 93921699 93928610 93921699 93928610 + ENST00000248564.5@GNG11 ENST00000248564.5 protein_coding 93921699,93926091 93922233,93928610 Gene ID= ENSG00000127920.5 TPM= 130.4 Transcript Type= protein_coding chr7 93993242 94004375 93993242 94004375 - ENST00000222547.7@BET1 ENST00000222547.7 protein_coding 94004198,93999170,93996265,93993242 94004375,93999294,93996321,93994385 Gene ID= ENSG00000105829.11 TPM= 31.69 Transcript Type= protein_coding chr7 94394561 94431232 94394561 94431232 + ENST00000297268.10@COL1A2 ENST00000297268.10 protein_coding 94394561,94397748,94398382,94399049,94400196,94401567,94404556,94404693,94404839,94405199,94405673,94406250,94407847,94408183,94408336,94408770,94409322,94409564,94409723,94410242,94410420,94410889,94411056,94412068,94412584,94413083,94413690,94413894,94414222,94415226,94416405,94417724,94418499,94419498,94420233,94420391,94420541,94421009,94421899,94422957,94424336,94425117,94425610,94425750,94425998,94426423,94427008,94427188,94427627,94428293,94429188,94430247 94395101,94397758,94398396,94399084,94400288,94401620,94404600,94404746,94404892,94405252,94405726,94406303,94407891,94408236,94408380,94408823,94409420,94409608,94409821,94410295,94410527,94410942,94411154,94412121,94412682,94413136,94413743,94413947,94414275,94415270,94416503,94417831,94418552,94419551,94420286,94420444,94420648,94421062,94421952,94423118,94424443,94425224,94425663,94425857,94426051,94426530,94427061,94427295,94427885,94428477,94429430,94431232 Gene ID= ENSG00000164692.17 TPM= 447.79 Transcript Type= protein_coding chr7 94509804 94557014 94509804 94557014 + transcript2512.chr7.nnic@CASD1 transcript2512.chr7.nnic protein_coding 94509804,94517560,94518203,94522845,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492 94510217,94517656,94518323,94523040,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557014 Gene ID= ENSG00000127995.16 TPM= 7.85 Transcript Type= NA chr7 94509801 94576851 94509801 94576851 + transcript2517.chr7.nnic@CASD1 transcript2517.chr7.nnic protein_coding 94509801,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94576198 94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94576851 Gene ID= ENSG00000127995.16 TPM= 2.72 Transcript Type= NA chr7 94509848 94557014 94509848 94557014 + transcript2519.chr7.nnic@CASD1 transcript2519.chr7.nnic protein_coding 94509848,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492 94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557014 Gene ID= ENSG00000127995.16 TPM= 3.32 Transcript Type= NA chr7 94509798 94557019 94509798 94557019 + ENST00000297273.8@CASD1 ENST00000297273.8 protein_coding 94509798,94517560,94518203,94527162,94528188,94533205,94533679,94535309,94537472,94538967,94544411,94545545,94547096,94549533,94551338,94552350,94554483,94555492 94510217,94517656,94518323,94527206,94528250,94533249,94533802,94535523,94537894,94539056,94544530,94545701,94547175,94549634,94551478,94552427,94554575,94557019 Gene ID= ENSG00000127995.16 TPM= 80.29 Transcript Type= protein_coding chr7 94585227 94656173 94585227 94656173 - transcript2530.chr7.nic@SGCE transcript2530.chr7.nic protein_coding 94655990,94639341,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585227 94656173,94639448,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515 Gene ID= ENSG00000127990.15 TPM= 6.95 Transcript Type= NA chr7 94594228 94656170 94594228 94656170 - transcript2539.chr7.nic@SGCE transcript2539.chr7.nic protein_coding 94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94594228 94656170,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94598004 Gene ID= ENSG00000127990.15 TPM= 4.53 Transcript Type= NA chr7 94585230 94656209 94585230 94656209 - ENST00000265735.11@SGCE ENST00000265735.11 protein_coding 94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585230 94656209,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515 Gene ID= ENSG00000127990.15 TPM= 133.72 Transcript Type= protein_coding chr7 94585250 94656166 94585250 94656166 - ENST00000437425.6@SGCE ENST00000437425.6 protein_coding 94655990,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94588689,94585250 94656166,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94588732,94585515 Gene ID= ENSG00000127990.15 TPM= 6.64 Transcript Type= protein_coding chr7 94585248 94656124 94585248 94656124 - ENST00000445866.6@SGCE ENST00000445866.6 protein_coding 94655990,94629719,94628202,94623325,94618758,94603290,94600646,94599697,94598775,94597930,94588689,94585248 94656124,94629841,94628359,94623397,94618956,94603452,94600857,94599723,94598963,94598004,94588732,94585515 Gene ID= ENSG00000127990.15 TPM= 3.62 Transcript Type= protein_coding chr7 94656325 94669695 94656325 94669695 + ENST00000482108.1@PEG10 ENST00000482108.1 protein_coding 94656325,94663334 94656580,94669695 Gene ID= ENSG00000242265.5 TPM= 166.62 Transcript Type= protein_coding chr7 94907735 95284367 94907735 95284367 + transcript2546.chr7.nic@PPP1R9A transcript2546.chr7.nic protein_coding 94907735,94909898,95111259,95120712,95161867,95198349,95225961,95247473,95250026,95251762,95251959,95268550,95269207,95273899,95274085,95284018 94908139,94911508,95111391,95120832,95161971,95198484,95226116,95247526,95250255,95251858,95252130,95268707,95269507,95273986,95274168,95284367 Gene ID= ENSG00000158528.11 TPM= 4.53 Transcript Type= NA chr7 95404861 95435038 95404861 95435038 - transcript2556.chr7.nnic@PON2 transcript2556.chr7.nnic protein_coding 95434878,95424515,95416242,95412312,95411653,95409901,95406119,95404861 95435038,95424585,95416297,95412477,95411779,95410101,95406247,95405488 Gene ID= ENSG00000105854.12 TPM= 8.15 Transcript Type= NA chr7 95485904 95551309 95485904 95551309 + transcript2573.chr7.nnic@ASB4 transcript2573.chr7.nnic protein_coding 95485904,95495758,95527813,95536437,95551026 95486158,95496057,95528303,95536550,95551309 Gene ID= ENSG00000005981.12 TPM= 2.72 Transcript Type= NA chr7 95485901 95540232 95485901 95540232 + ENST00000325885.5@ASB4 ENST00000325885.5 protein_coding 95485901,95495758,95527813,95536437,95537571 95486158,95496057,95528303,95536550,95540232 Gene ID= ENSG00000005981.12 TPM= 82.4 Transcript Type= protein_coding chr7 95485901 95528801 95485901 95528801 + ENST00000428113.5@ASB4 ENST00000428113.5 protein_coding 95485901,95495758,95527813 95486158,95496057,95528801 Gene ID= ENSG00000005981.12 TPM= 27.17 Transcript Type= protein_coding chr7 95583499 95596491 95583499 95596491 - ENST00000005178.5@PDK4 ENST00000005178.5 protein_coding 95596164,95595023,95593699,95592760,95592511,95591988,95589640,95587727,95587418,95587010,95583499 95596491,95595164,95593770,95592944,95592597,95592065,95589716,95587825,95587528,95587123,95585781 Gene ID= ENSG00000004799.7 TPM= 387.57 Transcript Type= protein_coding chr7 95772554 96098424 95772554 96098424 + ENST00000447467.6@DYNC1I1 ENST00000447467.6 protein_coding 95772554,95804721,95810392,95813247,95828057,95869883,95977512,95984815,95987056,95995948,96028175,96032667,96035619,96039277,96076057,96080363,96097483 95772773,95804837,95810506,95813337,95828116,95869998,95977601,95984977,95987155,95996073,96028321,96032780,96035752,96039421,96076197,96080488,96098424 Gene ID= ENSG00000158560.14 TPM= 6.34 Transcript Type= protein_coding chr7 96120221 96322147 96120221 96322147 - ENST00000416240.6@SLC25A13 ENST00000416240.6 protein_coding 96321942,96296898,96277196,96234802,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96146556,96131743,96121839,96121655,96120221 96322147,96296951,96277338,96234917,96208977,96193183,96191247,96189674,96189378,96185014,96184435,96171524,96170125,96146696,96131881,96121997,96121745,96121377 Gene ID= ENSG00000004864.13 TPM= 4.07 Transcript Type= protein_coding chr7 96120220 96322093 96120220 96322093 - ENST00000265631.9@SLC25A13 ENST00000265631.9 protein_coding 96321942,96296898,96277196,96234802,96208838,96193037,96191109,96189581,96189294,96184927,96184277,96171472,96170045,96146556,96131743,96121839,96121655,96120220 96322093,96296951,96277338,96234917,96208977,96193183,96191247,96189674,96189378,96185011,96184435,96171524,96170125,96146696,96131881,96121997,96121745,96121377 Gene ID= ENSG00000004864.13 TPM= 15.85 Transcript Type= protein_coding chr7 96649195 96709858 96649195 96709858 - ENST00000444799.5@SEM1 ENST00000444799.5 protein_coding 96709688,96694798,96649195 96709858,96694891,96650519 Gene ID= ENSG00000127922.9 TPM= 2.26 Transcript Type= protein_coding chr7 96687951 96709891 96687951 96709891 - ENST00000248566.3@SEM1 ENST00000248566.3 protein_coding 96709688,96694798,96687951 96709891,96694891,96688966 Gene ID= ENSG00000127922.9 TPM= 195.14 Transcript Type= protein_coding chr7 97116590 97181763 97116590 97181763 + ENST00000432641.2@SDHAF3 ENST00000432641.2 protein_coding 97116590,97181012 97117897,97181763 Gene ID= ENSG00000196636.7 TPM= 26.26 Transcript Type= protein_coding chr7 97852126 97972352 97852126 97972352 - transcript2591.chr7.nnic@AC079781.5 transcript2591.chr7.nnic processed_transcript 97972135,97945508,97937080,97928082,97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852126 97972352,97945615,97937160,97928777,97872449,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468 Gene ID= ENSG00000284707.1 TPM= 2.35 Transcript Type= NA chr7 97852126 97972352 97852126 97972352 - transcript2592.chr7.nnic@AC079781.5 transcript2592.chr7.nnic processed_transcript 97972135,97969770,97937080,97928082,97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852126 97972352,97969845,97937160,97928777,97872449,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468 Gene ID= ENSG00000284707.1 TPM= 2.35 Transcript Type= NA chr7 97852126 97972349 97852126 97972349 - transcript2593.chr7.nnic@AC079781.5 transcript2593.chr7.nnic processed_transcript 97972135,97937080,97928082,97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852126 97972349,97937160,97928777,97872449,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468 Gene ID= ENSG00000284707.1 TPM= 2.35 Transcript Type= NA chr7 97852126 97872447 97852126 97872447 - transcript2597.chr7.nnic@AC079781.5 transcript2597.chr7.nnic processed_transcript 97872351,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852126 97872447,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468 Gene ID= ENSG00000284707.1 TPM= 3.26 Transcript Type= NA chr7 97922751 97972349 97922751 97972349 - transcript2605.chr7.nnic@AC079781.5 transcript2605.chr7.nnic processed_transcript 97972135,97937080,97928082,97922751 97972349,97937160,97928777,97923083 Gene ID= ENSG00000284707.1 TPM= 1.81 Transcript Type= NA chr7 97966593 97972352 97966593 97972352 - transcript2607.chr7.nnic@AC079781.5 transcript2607.chr7.nnic processed_transcript 97972135,97969770,97966593 97972352,97969845,97966977 Gene ID= ENSG00000284707.1 TPM= 4.07 Transcript Type= NA chr7 97852131 97872471 97852131 97872471 - ENST00000394308.7@ASNS ENST00000394308.7 protein_coding 97872351,97869778,97868908,97864259,97859213,97858854,97858278,97856690,97855353,97854580,97853305,97853060,97852131 97872471,97869813,97869179,97864496,97859398,97858955,97858405,97856816,97855459,97854680,97853386,97853215,97852468 Gene ID= ENSG00000070669.16 TPM= 8.69 Transcript Type= protein_coding chr7 97966418 97972352 97966418 97972352 - transcript2606.chr7.nnic@AC004967.1 transcript2606.chr7.nnic transcribed_unprocessed_pseudogene 97972135,97969770,97969005,97966418 97972352,97969845,97969052,97966977 Gene ID= ENSG00000243554.1 TPM= 6.79 Transcript Type= NA chr7 98106885 98209633 98106885 98209633 + ENST00000297293.5@LMTK2 ENST00000297293.5 protein_coding 98106885,98137315,98141397,98151382,98154758,98159338,98171541,98185051,98186877,98190728,98191614,98203574,98203944,98205464 98107280,98137442,98141541,98151455,98154876,98159425,98171674,98185135,98186998,98190877,98194572,98203706,98204186,98209633 Gene ID= ENSG00000164715.5 TPM= 8.15 Transcript Type= protein_coding chr7 98214624 98252251 98214624 98252251 - ENST00000447648.6@TECPR1 ENST00000447648.6 protein_coding 98252126,98251394,98245922,98244885,98244571,98243467,98241070,98240851,98238509,98236776,98233421,98232827,98231804,98231224,98230961,98229039,98228014,98225006,98224801,98223662,98222990,98222386,98221661,98217936,98217692,98214624 98252251,98251548,98246165,98245067,98244693,98243592,98241244,98240951,98238610,98236921,98233911,98232972,98231959,98231373,98231118,98229166,98228116,98225102,98224880,98223718,98223170,98222521,98221753,98218042,98217811,98217503 Gene ID= ENSG00000205356.9 TPM= 10.41 Transcript Type= protein_coding chr7 98215437 98252233 98215437 98252233 - transcript2619.chr7.nnic@TECPR1 transcript2619.chr7.nnic protein_coding 98252126,98251419,98245922,98243467,98241070,98240851,98238509,98236776,98233421,98232827,98231804,98231224,98230961,98229039,98228014,98225006,98224801,98223662,98222990,98222386,98221661,98217936,98217692,98215437 98252233,98251548,98246165,98243592,98241244,98240951,98238610,98236921,98233911,98232972,98231959,98231373,98231118,98229166,98228116,98225102,98224880,98223718,98223170,98222521,98221753,98218042,98217811,98217503 Gene ID= ENSG00000205356.9 TPM= 4.98 Transcript Type= NA chr7 98215437 98252233 98215437 98252233 - transcript2620.chr7.nic@TECPR1 transcript2620.chr7.nic protein_coding 98252126,98251419,98245922,98244571,98243467,98241070,98240851,98238509,98236776,98232827,98231804,98231224,98230961,98229039,98228014,98225006,98224801,98223662,98222990,98222386,98221661,98217936,98217692,98215437 98252233,98251548,98246165,98245067,98243592,98241244,98240951,98238610,98236921,98233911,98231959,98231373,98231118,98229166,98228116,98225102,98224880,98223718,98223170,98222521,98221753,98218042,98217811,98217503 Gene ID= ENSG00000205356.9 TPM= 3.62 Transcript Type= NA chr7 98252379 98291524 98252379 98291524 + ENST00000456357.6@BRI3 ENST00000456357.6 protein_coding 98252379,98282351,98291111 98252528,98282453,98291524 Gene ID= ENSG00000164713.9 TPM= 4.98 Transcript Type= processed_transcript chr7 98281675 98291524 98281675 98291524 + ENST00000297290.3@BRI3 ENST00000297290.3 protein_coding 98281675,98282351,98291111 98281937,98282453,98291524 Gene ID= ENSG00000164713.9 TPM= 25.81 Transcript Type= protein_coding chr7 98291651 98401068 98291651 98401068 - ENST00000005260.8@BAIAP2L1 ENST00000005260.8 protein_coding 98400802,98362357,98355042,98320237,98320058,98317219,98315460,98312097,98310445,98307689,98306439,98304196,98294074,98291651 98401068,98362432,98355128,98320298,98320129,98317356,98315612,98312264,98310592,98307896,98306516,98304376,98294111,98293596 Gene ID= ENSG00000006453.13 TPM= 37.13 Transcript Type= protein_coding chr7 98617297 98629868 98617297 98629868 + ENST00000265634.3@NPTX2 ENST00000265634.3 protein_coding 98617297,98619643,98624922,98627165,98628402 98617887,98619859,98625166,98627344,98629868 Gene ID= ENSG00000106236.3 TPM= 124.97 Transcript Type= protein_coding chr7 99027436 99142563 99027436 99142563 - transcript2643.chr7.nnic@SMURF1 transcript2643.chr7.nnic protein_coding 99141754,99061799,99060599,99057418,99057205,99054790,99052205,99051357,99049563,99047684,99045698,99042118,99040378,99038388,99037067,99035515,99033037,99027436 99142563,99061837,99060707,99057551,99057270,99054865,99052446,99051441,99049709,99047882,99045801,99042232,99040556,99038525,99037187,99035716,99033121,99030683 Gene ID= ENSG00000198742.9 TPM= 9.96 Transcript Type= NA chr7 99325910 99366257 99325910 99366257 + ENST00000262942.9@ARPC1A ENST00000262942.9 protein_coding 99325910,99333325,99338181,99344293,99348852,99353909,99358340,99359545,99363543,99365891 99326004,99333417,99338285,99344515,99348959,99354121,99358415,99359738,99363633,99366257 Gene ID= ENSG00000241685.9 TPM= 189.26 Transcript Type= protein_coding chr7 99374675 99394801 99374675 99394801 + ENST00000252725.9@ARPC1B ENST00000252725.9 protein_coding 99374675,99385702,99386685,99388039,99389905,99390893,99391178,99392671,99394029,99394451 99374781,99385778,99386789,99388261,99390012,99391099,99391253,99392876,99394119,99394801 Gene ID= ENSG00000130429.12 TPM= 199.04 Transcript Type= protein_coding chr7 99408641 99419616 99408641 99419616 + ENST00000403633.6@BUD31 ENST00000403633.6 protein_coding 99408641,99410034,99411064,99416138,99417429,99419391 99409004,99410169,99411186,99416260,99417595,99419616 Gene ID= ENSG00000106245.10 TPM= 62.48 Transcript Type= protein_coding chr7 99408978 99419608 99408978 99419608 + ENST00000222969.9@BUD31 ENST00000222969.9 protein_coding 99408978,99410034,99411064,99416138,99417429,99419391 99409245,99410169,99411186,99416260,99417595,99419608 Gene ID= ENSG00000106245.10 TPM= 25.36 Transcript Type= protein_coding chr7 99419114 99438798 99419114 99438798 - transcript2670.chr7.nic@PTCD1 transcript2670.chr7.nic protein_coding 99438692,99434790,99432924,99429588,99429103,99424795,99423775,99419114 99438798,99435268,99433418,99429806,99429204,99425616,99423957,99420149 Gene ID= ENSG00000106246.17 TPM= 5.73 Transcript Type= NA chr7 99419114 99438754 99419114 99438754 - transcript2671.chr7.nic@PTCD1 transcript2671.chr7.nic protein_coding 99438551,99434790,99433278,99429588,99429103,99424795,99423775,99419114 99438754,99435268,99433418,99429806,99429204,99425616,99423957,99420149 Gene ID= ENSG00000106246.17 TPM= 6.64 Transcript Type= NA chr7 99438922 99457342 99438922 99457342 + ENST00000436336.6@CPSF4 ENST00000436336.6 protein_coding 99438922,99444789,99448121,99450276,99450702,99452368,99454041,99456432 99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457342 Gene ID= ENSG00000160917.14 TPM= 37.13 Transcript Type= protein_coding chr7 99439073 99457371 99439073 99457371 + ENST00000292476.9@CPSF4 ENST00000292476.9 protein_coding 99439073,99444789,99448121,99450276,99450702,99452368,99453966,99456432 99439185,99444839,99448273,99450371,99450795,99452440,99454136,99457371 Gene ID= ENSG00000160917.14 TPM= 1.81 Transcript Type= protein_coding chr7 99458195 99466331 99458195 99466331 - ENST00000292475.7@ATP5J2 ENST00000292475.7 protein_coding 99466111,99460086,99459147,99458195 99466331,99460193,99459263,99458355 Gene ID= ENSG00000241468.7 TPM= 56.6 Transcript Type= protein_coding chr7 99458190 99466167 99458190 99466167 - ENST00000449683.5@ATP5J2 ENST00000449683.5 protein_coding 99466129,99460086,99459147,99458190 99466167,99460223,99459263,99458355 Gene ID= ENSG00000241468.7 TPM= 16.75 Transcript Type= protein_coding chr7 99458195 99466164 99458195 99466164 - ENST00000359832.8@ATP5J2 ENST00000359832.8 protein_coding 99466111,99460086,99458195 99466164,99460193,99458355 Gene ID= ENSG00000241468.7 TPM= 2.72 Transcript Type= protein_coding chr7 99493240 99500297 99493240 99500297 - ENST00000337673.6@ZNF394 ENST00000337673.6 protein_coding 99499638,99498716,99493240 99500297,99498842,99494631 Gene ID= ENSG00000160908.14 TPM= 27.17 Transcript Type= protein_coding chr7 99493242 99500264 99493242 99500264 - ENST00000426306.2@ZNF394 ENST00000426306.2 protein_coding 99499638,99493242 99500264,99494631 Gene ID= ENSG00000160908.14 TPM= 1.81 Transcript Type= protein_coding chr7 99505256 99533821 99505256 99533821 + transcript2701.chr7.nic@ZKSCAN5 transcript2701.chr7.nic protein_coding 99505256,99512453,99519827,99520169,99525813,99531108 99506458,99512591,99519909,99520304,99526418,99533821 Gene ID= ENSG00000196652.11 TPM= 2.72 Transcript Type= NA chr7 99505256 99534107 99505256 99534107 + transcript2704.chr7.nnic@ZKSCAN5 transcript2704.chr7.nnic protein_coding 99505256,99512453,99525813,99531108 99506458,99512591,99526418,99534107 Gene ID= ENSG00000196652.11 TPM= 1.81 Transcript Type= NA chr7 99546308 99552134 99546308 99552134 - ENST00000449309.1@FAM200A ENST00000449309.1 protein_coding 99551854,99546308 99552134,99548506 Gene ID= ENSG00000221909.2 TPM= 11.77 Transcript Type= protein_coding chr7 99558406 99564705 99558406 99564705 + ENST00000320583.9@ZNF655 ENST00000320583.9 protein_coding 99558406,99560533,99561888,99562368,99563863 99558787,99560695,99561973,99562494,99564705 Gene ID= ENSG00000197343.10 TPM= 8.9 Transcript Type= protein_coding chr7 99558546 99576451 99558546 99576451 + transcript2718.chr7.nnic@ZNF655 transcript2718.chr7.nnic protein_coding 99558546,99560533,99562368,99571688,99572245 99558787,99560695,99562494,99571792,99576451 Gene ID= ENSG00000197343.10 TPM= 2.72 Transcript Type= NA chr7 99558625 99564703 99558625 99564703 + transcript2722.chr7.nnic@ZNF655 transcript2722.chr7.nnic protein_coding 99558625,99560533,99562368,99563863 99558787,99560695,99562494,99564703 Gene ID= ENSG00000197343.10 TPM= 2.56 Transcript Type= NA chr7 99558422 99564703 99558422 99564703 + ENST00000357864.6@ZNF655 ENST00000357864.6 protein_coding 99558422,99560533,99563863 99558787,99560695,99564703 Gene ID= ENSG00000197343.10 TPM= 3.92 Transcript Type= protein_coding chr7 99558642 99610830 99558642 99610830 + transcript2711.chr7.nnic@AC005020.2 transcript2711.chr7.nnic protein_coding 99558642,99560533,99600205,99604386,99606748,99607673,99610393 99558787,99560695,99600285,99604596,99606894,99607810,99610830 Gene ID= ENSG00000272647.3 TPM= 3.62 Transcript Type= NA chr7 99616621 99672544 99616621 99672544 + transcript2749.chr7.nnic@ZSCAN25 transcript2749.chr7.nnic protein_coding 99616621,99618525,99619048,99619561,99621373,99622549,99624057,99669095 99617016,99618651,99619132,99619993,99621574,99622640,99624180,99672544 Gene ID= ENSG00000197037.10 TPM= 2.72 Transcript Type= NA chr7 99616966 99628169 99616966 99628169 + transcript2750.chr7.nic@ZSCAN25 transcript2750.chr7.nic protein_coding 99616966,99618525,99619048,99619561,99621373,99622549,99624057 99617016,99618651,99619132,99619993,99621574,99622640,99628169 Gene ID= ENSG00000197037.10 TPM= 1.81 Transcript Type= NA chr7 99616948 99632407 99616948 99632407 + ENST00000394152.6@ZSCAN25 ENST00000394152.6 protein_coding 99616948,99618525,99619048,99619561,99621373,99622549,99624057,99629191 99617016,99618651,99619132,99619993,99621574,99622640,99624180,99632407 Gene ID= ENSG00000197037.10 TPM= 9.06 Transcript Type= protein_coding chr7 99648195 99679996 99648195 99679996 - transcript2738.chr7.nic@CYP3A5 transcript2738.chr7.nic protein_coding 99679826,99676115,99674533,99672784,99672580,99666952,99666601,99665166,99662816,99660499,99652553,99650073,99648195 99679996,99676208,99674585,99672915,99672679,99667065,99666689,99665314,99664095,99660659,99652779,99650232,99648400 Gene ID= ENSG00000106258.13 TPM= 1.81 Transcript Type= NA chr7 99757676 99784265 99757676 99784265 - ENST00000336411.6@CYP3A4 ENST00000336411.6 protein_coding 99784011,99779992,99778028,99772590,99770122,99769768,99768354,99767131,99766377,99763855,99762041,99760819,99757676 99784265,99780085,99778080,99772689,99770235,99769856,99768502,99767258,99766443,99764015,99762267,99760981,99758228 Gene ID= ENSG00000160868.14 TPM= 7.24 Transcript Type= protein_coding chr7 99890413 99919600 99890413 99919600 - ENST00000349062.6@TRIM4 ENST00000349062.6 protein_coding 99919009,99909565,99908582,99903576,99903218,99890413 99919600,99909660,99908812,99903598,99903315,99892746 Gene ID= ENSG00000146833.15 TPM= 127.68 Transcript Type= protein_coding chr7 99890413 99919531 99890413 99919531 - ENST00000355947.6@TRIM4 ENST00000355947.6 protein_coding 99919009,99916702,99909565,99908582,99903576,99903218,99890413 99919531,99916779,99909660,99908812,99903598,99903315,99892746 Gene ID= ENSG00000146833.15 TPM= 2.72 Transcript Type= protein_coding chr7 100049772 100065045 100049772 100065045 + transcript2770.chr7.nic@ZSCAN21 transcript2770.chr7.nic protein_coding 100049772,100051478,100056911,100057698,100063788 100049841,100051610,100057405,100057890,100065045 Gene ID= ENSG00000166529.14 TPM= 6.79 Transcript Type= NA chr7 100049774 100065038 100049774 100065038 + ENST00000456748.6@ZSCAN21 ENST00000456748.6 protein_coding 100049774,100056911,100057698,100063788,100064083 100049841,100057405,100057890,100063979,100065038 Gene ID= ENSG00000166529.14 TPM= 1.81 Transcript Type= protein_coding chr7 100049774 100065036 100049774 100065036 + ENST00000292450.8@ZSCAN21 ENST00000292450.8 protein_coding 100049774,100056911,100057698,100063788 100049841,100057405,100057890,100065036 Gene ID= ENSG00000166529.14 TPM= 12.22 Transcript Type= protein_coding chr7 100069972 100081764 100069972 100081764 - ENST00000424697.5@ZNF3 ENST00000424697.5 protein_coding 100081635,100077303,100075542,100075135,100069972 100081764,100077433,100075630,100075261,100072212 Gene ID= ENSG00000166526.16 TPM= 1.81 Transcript Type= protein_coding chr7 100069988 100081740 100069988 100081740 - ENST00000299667.8@ZNF3 ENST00000299667.8 protein_coding 100081635,100079536,100077303,100075542,100075135,100069988 100081740,100079656,100077433,100075630,100075261,100072212 Gene ID= ENSG00000166526.16 TPM= 16.3 Transcript Type= protein_coding chr7 100088981 100091905 100088981 100091905 + ENST00000418625.5@COPS6 ENST00000418625.5 protein_coding 100088981,100089293,100089615,100090399,100090592,100090902,100091038,100091238,100091420,100091649 100089066,100089415,100089746,100090487,100090654,100090949,100091152,100091330,100091520,100091905 Gene ID= ENSG00000168090.9 TPM= 2.72 Transcript Type= protein_coding chr7 100092234 100100774 100092234 100100774 - transcript2785.chr7.nic@MCM7 transcript2785.chr7.nic protein_coding 100100213,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092234 100100774,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133 Gene ID= ENSG00000166508.17 TPM= 15.08 Transcript Type= NA chr7 100092234 100100748 100092234 100100748 - transcript2786.chr7.nnic@MCM7 transcript2786.chr7.nnic protein_coding 100100544,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092234 100100748,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133 Gene ID= ENSG00000166508.17 TPM= 3.31 Transcript Type= NA chr7 100092234 100100774 100092234 100100774 - transcript2812.chr7.nic@MCM7 transcript2812.chr7.nic protein_coding 100100213,100100014,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092234 100100774,100100093,100099753,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133 Gene ID= ENSG00000166508.17 TPM= 6.02 Transcript Type= NA chr7 100092234 100100768 100092234 100100768 - transcript2815.chr7.nic@MCM7 transcript2815.chr7.nic protein_coding 100100014,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092234 100100768,100099753,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133 Gene ID= ENSG00000166508.17 TPM= 2.4 Transcript Type= NA chr7 100092781 100101940 100092781 100101940 - ENST00000303887.9@MCM7 ENST00000303887.9 protein_coding 100101264,100100014,100099589,100099279,100099023,100098578,100098141,100097834,100097614,100097301,100095774,100095387,100094173,100093292,100092781 100101940,100100093,100099753,100099403,100099203,100098715,100098290,100097948,100097745,100097384,100096167,100095470,100094341,100093401,100093133 Gene ID= ENSG00000166508.17 TPM= 21.19 Transcript Type= protein_coding chr7 100101557 100107179 100101557 100107179 + ENST00000359593.8@AP4M1 ENST00000359593.8 protein_coding 100101557,100101880,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658 100101772,100101968,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107179 Gene ID= ENSG00000221838.9 TPM= 15.85 Transcript Type= protein_coding chr7 100102061 100107148 100102061 100107148 + ENST00000422582.5@AP4M1 ENST00000422582.5 protein_coding 100102061,100102675,100102864,100103409,100103612,100104092,100104874,100105045,100105240,100105445,100105959,100106241,100106403,100106658 100102393,100102781,100102960,100103519,100103692,100104154,100104940,100105098,100105346,100105539,100106003,100106291,100106514,100107148 Gene ID= ENSG00000221838.9 TPM= 1.36 Transcript Type= protein_coding chr7 100107071 100119364 100107071 100119364 - transcript2783.chr7.nic@TAF6 transcript2783.chr7.nic protein_coding 100119204,100118518,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107071 100119364,100118649,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623 Gene ID= ENSG00000106290.14 TPM= 20.72 Transcript Type= NA chr7 100107070 100119398 100107070 100119398 - ENST00000453269.6@TAF6 ENST00000453269.6 protein_coding 100119204,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107070 100119398,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623 Gene ID= ENSG00000106290.14 TPM= 95.88 Transcript Type= protein_coding chr7 100107071 100119375 100107071 100119375 - transcript2800.chr7.nic@TAF6 transcript2800.chr7.nic protein_coding 100119204,100114084,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107071 100119375,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623 Gene ID= ENSG00000106290.14 TPM= 6.08 Transcript Type= NA chr7 100107078 100119364 100107078 100119364 - ENST00000452041.5@TAF6 ENST00000452041.5 protein_coding 100119329,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107078 100119364,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623 Gene ID= ENSG00000106290.14 TPM= 17.1 Transcript Type= protein_coding chr7 100107079 100119346 100107079 100119346 - ENST00000344095.8@TAF6 ENST00000344095.8 protein_coding 100118880,100114054,100113868,100113616,100113349,100112798,100112108,100111922,100111728,100111139,100110200,100109948,100108367,100107926,100107079 100119346,100114268,100113954,100113769,100113405,100112917,100112253,100111999,100111829,100111321,100110274,100110073,100108540,100108123,100107623 Gene ID= ENSG00000106290.14 TPM= 3.51 Transcript Type= protein_coding chr7 100119613 100125511 100119613 100125511 + ENST00000262932.4@CNPY4 ENST00000262932.4 protein_coding 100119613,100122259,100122481,100122784,100124514,100124725 100119862,100122385,100122577,100122906,100124631,100125511 Gene ID= ENSG00000166997.7 TPM= 29.88 Transcript Type= protein_coding chr7 100126694 100128498 100126694 100128498 + ENST00000398075.3@MBLAC1 ENST00000398075.3 protein_coding 100126694,100127368 100127064,100128498 Gene ID= ENSG00000214309.4 TPM= 6.34 Transcript Type= protein_coding chr7 100148978 100154212 100148978 100154212 + ENST00000468582.5@LAMTOR4 ENST00000468582.5 protein_coding 100148978,100149499,100153400,100153867 100149053,100149579,100153517,100154212 Gene ID= ENSG00000188186.10 TPM= 6.11 Transcript Type= protein_coding chr7 100148907 100154203 100148907 100154203 + ENST00000341942.9@LAMTOR4 ENST00000341942.9 protein_coding 100148907,100149499,100153400,100153867 100148975,100149579,100153517,100154203 Gene ID= ENSG00000188186.10 TPM= 113.87 Transcript Type= protein_coding chr7 100148913 100154203 100148913 100154203 + ENST00000460732.5@LAMTOR4 ENST00000460732.5 protein_coding 100148913,100149499,100153400,100153850 100148975,100149579,100153517,100154203 Gene ID= ENSG00000188186.10 TPM= 2.94 Transcript Type= protein_coding chr7 100148934 100154203 100148934 100154203 + ENST00000474831.5@LAMTOR4 ENST00000474831.5 protein_coding 100148934,100149499,100153400,100153867 100148975,100149565,100153517,100154203 Gene ID= ENSG00000188186.10 TPM= 2.04 Transcript Type= processed_transcript chr7 100154422 100158731 100154422 100158731 - transcript2841.chr7.nic@C7orf43 transcript2841.chr7.nic protein_coding 100158089,100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154422 100158731,100157938,100157762,100157459,100157214,100156992,100156716,100156549,100155931,100155455,100155164 Gene ID= ENSG00000146826.16 TPM= 3.92 Transcript Type= NA chr7 100154422 100158725 100154422 100158725 - transcript2845.chr7.nic@C7orf43 transcript2845.chr7.nic protein_coding 100157843,100157633,100157373,100157094,100156845,100156634,100155671,100155262,100154422 100158725,100157762,100157459,100157214,100156992,100156716,100156549,100155455,100155164 Gene ID= ENSG00000146826.16 TPM= 2.11 Transcript Type= NA chr7 100154420 100158685 100154420 100158685 - ENST00000316937.7@C7orf43 ENST00000316937.7 protein_coding 100158089,100157843,100157633,100157373,100157094,100156845,100156634,100156386,100155671,100155262,100154420 100158685,100157938,100157762,100157459,100157214,100156992,100156716,100156549,100155825,100155455,100155164 Gene ID= ENSG00000146826.16 TPM= 35.62 Transcript Type= protein_coding chr7 100159245 100168750 100159245 100168750 - ENST00000360039.8@GAL3ST4 ENST00000360039.8 protein_coding 100168546,100166971,100166502,100159245 100168750,100167283,100166805,100160959 Gene ID= ENSG00000197093.10 TPM= 10.87 Transcript Type= protein_coding chr7 100177878 100214388 100177878 100214388 + transcript2857.chr7.nic@STAG3 transcript2857.chr7.nic protein_coding 100177878,100180493,100182090,100182723,100186200,100188453,100188812,100189445,100195309,100197156,100197778,100198087,100198475,100198843,100199262,100199541,100200236,100200453,100200769,100201090,100201264,100201786,100201949,100202172,100202454,100204021,100204627,100205005,100205227,100211011,100211438,100211795,100213735,100214007 100177972,100180672,100182192,100182839,100186296,100188529,100189016,100189596,100195382,100197279,100197876,100198166,100198582,100198957,100199367,100199644,100200328,100200542,100200969,100201160,100201351,100201866,100202041,100202340,100202590,100204122,100204775,100205133,100205384,100211185,100211539,100211876,100213806,100214388 Gene ID= ENSG00000066923.17 TPM= 1.81 Transcript Type= NA chr7 100200660 100272242 100200660 100272242 - transcript2864.chr7.nnic@GATS transcript2864.chr7.nnic protein_coding 100271838,100233604,100223882,100223570,100222597,100213047,100200660 100272242,100233674,100224075,100223698,100222720,100213133,100202603 Gene ID= ENSG00000239521.7 TPM= 2.72 Transcript Type= NA chr7 100200653 100272208 100200653 100272208 - ENST00000543273.5@GATS ENST00000543273.5 protein_coding 100271838,100233604,100223882,100223570,100222597,100200653 100272208,100233674,100224075,100223698,100222720,100202603 Gene ID= ENSG00000239521.7 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr7 100212022 100272214 100212022 100272214 - ENST00000414739.3@GATS ENST00000414739.3 protein_coding 100271838,100233604,100223882,100223570,100222597,100212022 100272214,100233674,100224075,100223698,100222720,100213133 Gene ID= ENSG00000239521.7 TPM= 15.39 Transcript Type= nonsense_mediated_decay chr7 100219236 100221490 100219236 100221490 + ENST00000317271.2@PVRIG ENST00000317271.2 protein_coding 100219236,100219713,100220114,100220547,100220760,100220928 100219400,100220028,100220464,100220673,100220820,100221490 Gene ID= ENSG00000213413.2 TPM= 1.81 Transcript Type= protein_coding chr7 100318926 100335983 100318926 100335983 - transcript2980.chr7.nnic@PMS2P1 transcript2980.chr7.nnic unprocessed_pseudogene 100335838,100332442,100330463,100330182,100328836,100325691,100318926 100335983,100332581,100330549,100330284,100329019,100325779,100321084 Gene ID= ENSG00000078319.9 TPM= 7.24 Transcript Type= NA chr7 100329992 100335983 100329992 100335983 - transcript2984.chr7.nic@PMS2P1 transcript2984.chr7.nic unprocessed_pseudogene 100335838,100332442,100330463,100329992 100335983,100332581,100330549,100330284 Gene ID= ENSG00000078319.9 TPM= 8.15 Transcript Type= NA chr7 100336085 100367835 100336085 100367835 + transcript2919.chr7.nic@STAG3L5P-PVRIG2P-PILRB transcript2919.chr7.nic processed_transcript 100336085,100338179,100338773,100345865,100349717,100351252,100352564,100352997,100353210,100353373,100355143,100356750,100358220,100358690,100359337,100367349 100336337,100338264,100338889,100345968,100349887,100352478,100352914,100353123,100353270,100354012,100355240,100356883,100358366,100359079,100359537,100367835 Gene ID= ENSG00000272752.6 TPM= 7.24 Transcript Type= NA chr7 100336085 100367835 100336085 100367835 + transcript2935.chr7.nic@STAG3L5P-PVRIG2P-PILRB transcript2935.chr7.nic processed_transcript 100336085,100338179,100338773,100345865,100349799,100351252,100352564,100352997,100353210,100353373,100355143,100356750,100358220,100358690,100359337,100367349 100336337,100338264,100338889,100345968,100349887,100352478,100352914,100353123,100353270,100354012,100355240,100356883,100358366,100359079,100359537,100367835 Gene ID= ENSG00000272752.6 TPM= 10.04 Transcript Type= NA chr7 100336085 100367835 100336085 100367835 + transcript2968.chr7.nic@STAG3L5P-PVRIG2P-PILRB transcript2968.chr7.nic processed_transcript 100336085,100338179,100338773,100345865,100349717,100351252,100352564,100353210,100355143,100356750,100358220,100358690,100359337,100367349 100336337,100338264,100338889,100345968,100349887,100352478,100353123,100353270,100355240,100356883,100358366,100359079,100359537,100367835 Gene ID= ENSG00000272752.6 TPM= 5.71 Transcript Type= NA chr7 100373445 100400099 100373445 100400099 + ENST00000198536.6@PILRA ENST00000198536.6 protein_coding 100373445,100374044,100389888,100397879,100399291,100399581,100399785 100373720,100374433,100390106,100397912,100399340,100399612,100400099 Gene ID= ENSG00000085514.15 TPM= 1.81 Transcript Type= protein_coding chr7 100373528 100400096 100373528 100400096 + ENST00000350573.2@PILRA ENST00000350573.2 protein_coding 100373528,100374044,100397879,100399291,100399581,100399785 100373720,100374433,100397912,100399340,100399612,100400096 Gene ID= ENSG00000085514.15 TPM= 2.72 Transcript Type= protein_coding chr7 100400873 100428664 100400873 100428664 - ENST00000360951.8@ZCWPW1 ENST00000360951.8 protein_coding 100428568,100425030,100420622,100419630,100419111,100417066,100416305,100415975,100409428,100408539,100407228,100406694,100405013,100404178,100403694,100400873 100428664,100425136,100420678,100419883,100419189,100417183,100416456,100416097,100409544,100408659,100407303,100406798,100405093,100404244,100403785,100401336 Gene ID= ENSG00000078487.17 TPM= 1.81 Transcript Type= protein_coding chr7 100428791 100434119 100428791 100434119 + transcript2993.chr7.nnic@MEPCE transcript2993.chr7.nnic protein_coding 100428791,100431030,100432919,100433263,100433502 100429040,100431689,100433137,100433389,100434119 Gene ID= ENSG00000146834.13 TPM= 4.68 Transcript Type= NA chr7 100429422 100434119 100429422 100434119 + transcript2994.chr7.nic@MEPCE transcript2994.chr7.nic protein_coding 100429422,100431030,100432919,100433263,100433502 100429513,100431689,100433137,100433389,100434119 Gene ID= ENSG00000146834.13 TPM= 4.68 Transcript Type= NA chr7 100428817 100434117 100428817 100434117 + ENST00000414441.5@MEPCE ENST00000414441.5 protein_coding 100428817,100430615,100432919,100433263,100433502 100429040,100431689,100433137,100433389,100434117 Gene ID= ENSG00000146834.13 TPM= 6.04 Transcript Type= protein_coding chr7 100429631 100434126 100429631 100434126 + ENST00000310512.3@MEPCE ENST00000310512.3 protein_coding 100429631,100432919,100433263,100433502 100431689,100433137,100433389,100434126 Gene ID= ENSG00000146834.13 TPM= 24.45 Transcript Type= protein_coding chr7 100435288 100436465 100435288 100436465 - transcript3012.chr7.nic@PPP1R35 transcript3012.chr7.nic protein_coding 100436141,100435848,100435288 100436465,100436064,100435533 Gene ID= ENSG00000160813.6 TPM= 2.04 Transcript Type= NA chr7 100435282 100436423 100435282 100436423 - ENST00000487452.1@PPP1R35 ENST00000487452.1 protein_coding 100435848,100435631,100435282 100436423,100435767,100435533 Gene ID= ENSG00000160813.6 TPM= 12.9 Transcript Type= retained_intron chr7 100435282 100436565 100435282 100436565 - ENST00000292330.2@PPP1R35 ENST00000292330.2 protein_coding 100436141,100435848,100435631,100435282 100436565,100436064,100435767,100435533 Gene ID= ENSG00000160813.6 TPM= 41.88 Transcript Type= protein_coding chr7 100435282 100436136 100435282 100436136 - ENST00000470295.5@PPP1R35 ENST00000470295.5 protein_coding 100435631,100435282 100436136,100435533 Gene ID= ENSG00000160813.6 TPM= 2.04 Transcript Type= retained_intron chr7 100466515 100479200 100466515 100479200 - transcript3001.chr7.nnic@TSC22D4 transcript3001.chr7.nnic protein_coding 100478794,100477277,100474274,100467552,100466515 100479200,100478201,100474440,100467600,100467168 Gene ID= ENSG00000166925.8 TPM= 8 Transcript Type= NA chr7 100466519 100479279 100466519 100479279 - ENST00000300181.6@TSC22D4 ENST00000300181.6 protein_coding 100478794,100477277,100474274,100467552,100466519 100479279,100478307,100474440,100467600,100467168 Gene ID= ENSG00000166925.8 TPM= 52.37 Transcript Type= protein_coding chr7 100466515 100479181 100466515 100479181 - transcript3008.chr7.nnic@TSC22D4 transcript3008.chr7.nnic protein_coding 100478794,100474274,100467552,100466515 100479181,100474440,100467600,100467168 Gene ID= ENSG00000166925.8 TPM= 5.73 Transcript Type= NA chr7 100466538 100479232 100466538 100479232 - ENST00000393991.5@TSC22D4 ENST00000393991.5 protein_coding 100478794,100477277,100474274,100467552,100466538 100479232,100477459,100474440,100467600,100467168 Gene ID= ENSG00000166925.8 TPM= 15.39 Transcript Type= protein_coding chr7 100539191 100568225 100539191 100568225 + transcript3017.chr7.nic@AGFG2 transcript3017.chr7.nic protein_coding 100539191,100548822,100550396,100553347,100554093,100555610,100556594,100562259,100562594,100562863,100563834,100564218,100564932 100539567,100548915,100550511,100553500,100554258,100555735,100556626,100562379,100562682,100562946,100563962,100564303,100568225 Gene ID= ENSG00000106351.12 TPM= 37.31 Transcript Type= NA chr7 100539225 100568219 100539225 100568219 + ENST00000300176.8@AGFG2 ENST00000300176.8 protein_coding 100539225,100548822,100550396,100553347,100554093,100555610,100562259,100562594,100562863,100563834,100564218,100564932 100539567,100548915,100550511,100553500,100554258,100555735,100562379,100562682,100562946,100563962,100564303,100568219 Gene ID= ENSG00000106351.12 TPM= 164.99 Transcript Type= protein_coding chr7 100572232 100578700 100572232 100578700 - ENST00000485071.2@AC069281.2 ENST00000485071.2 processed_transcript 100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576694,100576238,100575871,100573297,100573106,100572860,100572654,100572232 100578700,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576323,100576008,100575782,100573212,100573013,100572751,100572571 Gene ID= ENSG00000274272.1 TPM= 2.56 Transcript Type= retained_intron chr7 100574013 100586178 100574013 100586178 - transcript3043.chr7.nic@LRCH4 transcript3043.chr7.nic protein_coding 100585881,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574013 100586178,100582459,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100575304 Gene ID= ENSG00000077454.15 TPM= 4.83 Transcript Type= NA chr7 100574013 100586178 100574013 100586178 - transcript3047.chr7.nic@LRCH4 transcript3047.chr7.nic protein_coding 100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577086,100576902,100576694,100576238,100575871,100575705,100574013 100586178,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577005,100576777,100576323,100576008,100575782,100575304 Gene ID= ENSG00000077454.15 TPM= 6.64 Transcript Type= NA chr7 100574013 100586178 100574013 100586178 - transcript3048.chr7.nic@LRCH4 transcript3048.chr7.nic protein_coding 100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576694,100576238,100575871,100575705,100574013 100586178,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576323,100576008,100575782,100575304 Gene ID= ENSG00000077454.15 TPM= 7.54 Transcript Type= NA chr7 100574013 100586178 100574013 100586178 - transcript3056.chr7.nic@LRCH4 transcript3056.chr7.nic protein_coding 100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100576694,100576238,100575871,100575705,100574013 100586178,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100576323,100576008,100575782,100575304 Gene ID= ENSG00000077454.15 TPM= 6.64 Transcript Type= NA chr7 100574660 100586153 100574660 100586153 - ENST00000310300.10@LRCH4 ENST00000310300.10 protein_coding 100585881,100582315,100582041,100581777,100578650,100578399,100578159,100577822,100577664,100577497,100577273,100577086,100576902,100576694,100576238,100575871,100575705,100574660 100586153,100582459,100582167,100581882,100578786,100578511,100578258,100577912,100577740,100577558,100577389,100577154,100577005,100576777,100576323,100576008,100575782,100575304 Gene ID= ENSG00000077454.15 TPM= 68.37 Transcript Type= protein_coding chr7 100602321 100608181 100602321 100608181 + transcript3064.chr7.nic@PCOLCE transcript3064.chr7.nic protein_coding 100602321,100603430,100603959,100605091,100606416,100607452,100607637,100607937 100602551,100603538,100604217,100605812,100606630,100607523,100607807,100608181 Gene ID= ENSG00000106333.12 TPM= 7.24 Transcript Type= NA chr7 100612540 100615381 100612540 100615381 + transcript3072.chr7.nnic@MOSPD3 transcript3072.chr7.nnic protein_coding 100612540,100612730,100613194,100613477,100614867,100615152 100612602,100612996,100613269,100613706,100615031,100615381 Gene ID= ENSG00000106330.11 TPM= 4.75 Transcript Type= NA chr7 100612102 100615326 100612102 100615326 + ENST00000223054.8@MOSPD3 ENST00000223054.8 protein_coding 100612102,100612730,100613194,100613477,100614867,100615152 100612241,100612996,100613269,100613706,100615031,100615326 Gene ID= ENSG00000106330.11 TPM= 3.85 Transcript Type= protein_coding chr7 100612510 100615384 100612510 100615384 + ENST00000393950.6@MOSPD3 ENST00000393950.6 protein_coding 100612510,100613194,100613477,100614867,100615152 100612996,100613269,100613706,100615031,100615384 Gene ID= ENSG00000106330.11 TPM= 60.9 Transcript Type= protein_coding chr7 100612556 100615384 100612556 100615384 + ENST00000424091.2@MOSPD3 ENST00000424091.2 protein_coding 100612556,100613194,100613507,100614867,100615152 100612996,100613269,100613706,100615031,100615384 Gene ID= ENSG00000106330.11 TPM= 1.13 Transcript Type= protein_coding chr7 100673531 100679174 100673531 100679174 + ENST00000303210.8@GNB2 ENST00000303210.8 protein_coding 100673531,100676177,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695 100673923,100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174 Gene ID= ENSG00000172354.9 TPM= 202.54 Transcript Type= protein_coding chr7 100676138 100679174 100676138 100679174 + ENST00000393924.1@GNB2 ENST00000393924.1 protein_coding 100676138,100676535,100676693,100677352,100677498,100677752,100678098,100678398,100678695 100676322,100676573,100676799,100677415,100677660,100677818,100678299,100678614,100679174 Gene ID= ENSG00000172354.9 TPM= 39.55 Transcript Type= protein_coding chr7 100679506 100694249 100679506 100694249 - transcript3092.chr7.nnic@GIGYF1 transcript3092.chr7.nnic protein_coding 100694110,100689302,100688592,100688451,100688204,100687981,100687788,100687505,100687298,100687006,100686649,100686180,100685974,100685344,100685049,100684723,100684450,100684237,100684020,100683818,100683550,100683304,100683012,100682590,100682322,100682072,100681864,100679506 100694249,100689555,100688718,100688515,100688307,100688110,100687883,100687616,100687406,100687046,100686819,100686433,100686079,100685481,100685146,100684894,100684616,100684337,100684157,100683918,100683632,100683444,100683230,100682777,100682482,100682235,100681993,100681771 Gene ID= ENSG00000146830.9 TPM= 28.07 Transcript Type= NA chr7 100706053 100707495 100706053 100707495 + ENST00000303151.4@POP7 ENST00000303151.4 protein_coding 100706053,100706821 100706304,100707495 Gene ID= ENSG00000172336.4 TPM= 34.41 Transcript Type= protein_coding chr7 100802568 100822868 100802568 100822868 - transcript3116.chr7.nic@EPHB4 transcript3116.chr7.nic protein_coding 100822271,100820141,100819557,100818520,100817192,100813919,100813652,100813095,100812747,100807365,100806420,100805501,100805166,100802568 100822868,100820296,100819889,100818644,100817357,100814021,100813716,100813208,100812994,100807580,100806569,100805694,100805321,100803590 Gene ID= ENSG00000196411.9 TPM= 76.97 Transcript Type= NA chr7 100802565 100827499 100802565 100827499 - ENST00000358173.7@EPHB4 ENST00000358173.7 protein_coding 100826979,100824203,100823644,100822271,100820141,100819557,100818520,100817192,100813919,100813652,100813095,100812747,100807365,100806420,100805501,100805166,100802565 100827499,100824273,100823931,100822667,100820296,100819889,100818644,100817357,100814021,100813716,100813208,100812994,100807580,100806569,100805694,100805321,100803590 Gene ID= ENSG00000196411.9 TPM= 294.3 Transcript Type= protein_coding chr7 100852709 100867009 100852709 100867009 + transcript3113.chr7.nic@SLC12A9 transcript3113.chr7.nic protein_coding 100852709,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100852839,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009 Gene ID= ENSG00000146828.17 TPM= 15.87 Transcript Type= NA chr7 100852699 100867009 100852699 100867009 + transcript3119.chr7.nnic@SLC12A9 transcript3119.chr7.nnic protein_coding 100852699,100854156,100854620,100855706,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100852835,100854378,100854754,100855837,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009 Gene ID= ENSG00000146828.17 TPM= 4.09 Transcript Type= NA chr7 100827011 100867009 100827011 100867009 + transcript3127.chr7.nnic@SLC12A9 transcript3127.chr7.nnic protein_coding 100827011,100834015,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100827047,100834147,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009 Gene ID= ENSG00000146828.17 TPM= 3.19 Transcript Type= NA chr7 100826864 100867009 100826864 100867009 + transcript3130.chr7.nnic@SLC12A9 transcript3130.chr7.nnic protein_coding 100826864,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100827047,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009 Gene ID= ENSG00000146828.17 TPM= 5.9 Transcript Type= NA chr7 100852718 100867009 100852718 100867009 + transcript3132.chr7.nic@SLC12A9 transcript3132.chr7.nic protein_coding 100852718,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100852835,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009 Gene ID= ENSG00000146828.17 TPM= 4.09 Transcript Type= NA chr7 100826977 100867009 100826977 100867009 + transcript3136.chr7.nnic@SLC12A9 transcript3136.chr7.nnic protein_coding 100826977,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100827047,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867009 Gene ID= ENSG00000146828.17 TPM= 4.09 Transcript Type= NA chr7 100852753 100867008 100852753 100867008 + ENST00000354161.7@SLC12A9 ENST00000354161.7 protein_coding 100852753,100854156,100854620,100855706,100856868,100858835,100859050,100859885,100860150,100861138,100861392,100861737,100862681,100865719 100852835,100854378,100854754,100855837,100857176,100858942,100859161,100860042,100860232,100861262,100861584,100861911,100862827,100867008 Gene ID= ENSG00000146828.17 TPM= 31.13 Transcript Type= protein_coding chr7 100866150 100873519 100866150 100873519 + transcript3137.chr7.nnic@TRIP6 transcript3137.chr7.nnic protein_coding 100866150,100867363,100867861,100868108,100868495,100870370,100870574,100871543,100872624,100873172 100866251,100867606,100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873519 Gene ID= ENSG00000087077.13 TPM= 16.07 Transcript Type= NA chr7 100867138 100873454 100867138 100873454 + ENST00000200457.8@TRIP6 ENST00000200457.8 protein_coding 100867138,100867861,100868108,100868495,100870370,100870574,100871543,100872624,100873172 100867606,100867988,100868233,100868866,100870463,100870743,100871721,100872744,100873454 Gene ID= ENSG00000087077.13 TPM= 127.46 Transcript Type= protein_coding chr7 100875065 100888670 100875065 100888670 + transcript3152.chr7.nic@SRRT transcript3152.chr7.nic protein_coding 100875065,100875573,100880696,100881285,100881659,100882053,100882765,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474 100875328,100875712,100880769,100881413,100881805,100882241,100883090,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888670 Gene ID= ENSG00000087087.19 TPM= 2.84 Transcript Type= NA chr7 100875126 100888664 100875126 100888664 + ENST00000618262.4@SRRT ENST00000618262.4 protein_coding 100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888054,100888257,100888474 100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664 Gene ID= ENSG00000087087.19 TPM= 21.86 Transcript Type= protein_coding chr7 100875126 100888664 100875126 100888664 + ENST00000614484.4@SRRT ENST00000614484.4 protein_coding 100875126,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474 100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664 Gene ID= ENSG00000087087.19 TPM= 76.19 Transcript Type= protein_coding chr7 100875185 100888664 100875185 100888664 + ENST00000618411.4@SRRT ENST00000618411.4 protein_coding 100875185,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885216,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888054,100888257,100888474 100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664 Gene ID= ENSG00000087087.19 TPM= 3.75 Transcript Type= protein_coding chr7 100875188 100888664 100875188 100888664 + ENST00000611405.4@SRRT ENST00000611405.4 protein_coding 100875188,100875573,100881285,100881659,100882053,100884070,100884368,100884740,100884923,100885213,100885701,100885863,100886247,100886795,100887047,100887320,100887703,100888042,100888257,100888474 100875328,100875712,100881413,100881805,100882241,100884239,100884552,100884838,100885040,100885370,100885762,100885941,100886435,100886968,100887200,100887513,100887859,100888143,100888383,100888664 Gene ID= ENSG00000087087.19 TPM= 6.47 Transcript Type= protein_coding chr7 101085447 101090684 101085447 101090684 + transcript3173.chr7.nnic@TRIM56 transcript3173.chr7.nnic protein_coding 101085447,101087072,101087312 101085571,101087168,101090684 Gene ID= ENSG00000169871.12 TPM= 9.96 Transcript Type= NA chr7 101085439 101097967 101085439 101097967 + ENST00000306085.10@TRIM56 ENST00000306085.10 protein_coding 101085439,101087006,101087312 101085571,101087168,101097967 Gene ID= ENSG00000169871.12 TPM= 40.75 Transcript Type= protein_coding chr7 101127089 101139266 101127089 101139266 + ENST00000223095.4@SERPINE1 ENST00000223095.4 protein_coding 101127089,101128393,101130421,101131875,101133695,101135494,101135715,101137001,101137405 101127244,101128664,101130654,101132069,101133893,101135594,101135801,101137084,101139266 Gene ID= ENSG00000106366.8 TPM= 110.48 Transcript Type= protein_coding chr7 101154397 101161277 101154397 101161277 + ENST00000337619.9@AP1S1 ENST00000337619.9 protein_coding 101154397,101156594,101157377,101159059,101160519 101154517,101156772,101157485,101159196,101161277 Gene ID= ENSG00000106367.13 TPM= 19.92 Transcript Type= protein_coding chr7 101205977 101217673 101205977 101217673 - ENST00000223127.7@PLOD3 ENST00000223127.7 protein_coding 101217166,101216695,101216410,101216163,101215908,101215089,101213107,101212842,101212530,101212253,101211846,101211591,101210532,101210331,101210093,101208853,101207578,101206779,101205977 101217673,101216786,101216546,101216326,101216020,101215152,101213204,101212943,101212655,101212374,101211950,101211716,101210673,101210444,101210161,101208957,101207724,101206904,101206436 Gene ID= ENSG00000106397.11 TPM= 96.89 Transcript Type= protein_coding chr7 101218163 101224188 101218163 101224188 + transcript3191.chr7.nic@ZNHIT1 transcript3191.chr7.nic protein_coding 101218163,101218319,101222604,101223477,101223673,101223937 101218217,101218485,101222774,101223556,101223842,101224188 Gene ID= ENSG00000106400.11 TPM= 2.72 Transcript Type= NA chr7 101217668 101224190 101217668 101224190 + ENST00000305105.2@ZNHIT1 ENST00000305105.2 protein_coding 101217668,101222604,101223477,101223673,101223937 101218217,101222774,101223556,101223842,101224190 Gene ID= ENSG00000106400.11 TPM= 117.72 Transcript Type= protein_coding chr7 101239612 101245085 101239612 101245085 - ENST00000223136.4@FIS1 ENST00000223136.4 protein_coding 101244960,101244007,101240830,101240142,101239612 101245085,101244139,101240906,101240247,101239903 Gene ID= ENSG00000214253.8 TPM= 148.13 Transcript Type= protein_coding chr7 101239594 101252316 101239594 101252316 - ENST00000474120.5@FIS1 ENST00000474120.5 protein_coding 101251895,101240830,101240142,101239594 101252316,101240906,101240247,101239903 Gene ID= ENSG00000214253.8 TPM= 2.94 Transcript Type= protein_coding chr7 101239612 101252291 101239612 101252291 - ENST00000473527.5@FIS1 ENST00000473527.5 protein_coding 101251895,101244007,101240830,101240142,101239612 101252291,101244139,101240906,101240247,101239903 Gene ID= ENSG00000214253.8 TPM= 1.43 Transcript Type= nonsense_mediated_decay chr7 101313367 101321823 101313367 101321823 - ENST00000621899.4@IFT22 ENST00000621899.4 protein_coding 101321671,101316340,101313367 101321823,101316542,101315282 Gene ID= ENSG00000128581.15 TPM= 3.62 Transcript Type= protein_coding chr7 101314753 101321764 101314753 101321764 - ENST00000498704.6@IFT22 ENST00000498704.6 protein_coding 101321671,101318124,101316340,101314753 101321764,101318213,101316542,101315282 Gene ID= ENSG00000128581.15 TPM= 3.62 Transcript Type= protein_coding chr7 101314795 101321777 101314795 101321777 - ENST00000437644.2@IFT22 ENST00000437644.2 protein_coding 101321671,101318956,101316340,101314795 101321777,101319032,101316542,101315282 Gene ID= ENSG00000128581.15 TPM= 2.72 Transcript Type= protein_coding chr7 101362877 101559024 101362877 101559024 + ENST00000613501.1@COL26A1 ENST00000613501.1 protein_coding 101362877,101419977,101447690,101533082,101539893,101543998,101545338,101547156,101549171,101551108,101553326,101555787,101557370 101363190,101420099,101447787,101533143,101540049,101544096,101545490,101547239,101549223,101551143,101553376,101555871,101559024 Gene ID= ENSG00000160963.13 TPM= 4.53 Transcript Type= protein_coding chr7 102286791 102321711 102286791 102321711 + transcript3208.chr7.nnic@SH2B2 transcript3208.chr7.nnic protein_coding 102286791,102286829,102300522,102306721,102308815,102314336,102314512,102317187,102320331,102321299 102286799,102287094,102301279,102306822,102308906,102314427,102314682,102317395,102320502,102321711 Gene ID= ENSG00000160999.10 TPM= 17.21 Transcript Type= NA chr7 102285155 102321711 102285155 102321711 + ENST00000536178.3@SH2B2 ENST00000536178.3 protein_coding 102285155,102300522,102306721,102308815,102314336,102314512,102317187,102320331,102321299 102285258,102301279,102306822,102308906,102314427,102314682,102317395,102320502,102321711 Gene ID= ENSG00000160999.10 TPM= 6.34 Transcript Type= protein_coding chr7 102363844 102426682 102363844 102426682 + transcript3214.chr7.nic@PRKRIP1 transcript3214.chr7.nic protein_coding 102363844,102365974,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014 102364411,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426682 Gene ID= ENSG00000128563.13 TPM= 4.53 Transcript Type= NA chr7 102363886 102426682 102363886 102426682 + transcript3217.chr7.nic@PRKRIP1 transcript3217.chr7.nic protein_coding 102363886,102366018,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014 102364206,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426682 Gene ID= ENSG00000128563.13 TPM= 2.35 Transcript Type= NA chr7 102363891 102426682 102363891 102426682 + transcript3222.chr7.nic@PRKRIP1 transcript3222.chr7.nic protein_coding 102363891,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014 102364411,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426682 Gene ID= ENSG00000128563.13 TPM= 1.81 Transcript Type= NA chr7 102363844 102426682 102363844 102426682 + transcript3223.chr7.nic@PRKRIP1 transcript3223.chr7.nic protein_coding 102363844,102365974,102375823,102376212,102399548,102404598,102407434,102425014 102364411,102366076,102375949,102376322,102399648,102404683,102407498,102426682 Gene ID= ENSG00000128563.13 TPM= 5.98 Transcript Type= NA chr7 102363891 102426682 102363891 102426682 + transcript3225.chr7.nic@PRKRIP1 transcript3225.chr7.nic protein_coding 102363891,102375823,102376212,102397620,102399548,102404598,102407434,102425014 102364411,102375949,102376322,102397698,102399648,102404683,102407498,102426682 Gene ID= ENSG00000128563.13 TPM= 3.26 Transcript Type= NA chr7 102363844 102397406 102363844 102397406 + transcript3228.chr7.nic@PRKRIP1 transcript3228.chr7.nic protein_coding 102363844,102365974,102375823,102376212,102395977 102364411,102366076,102375949,102376322,102397406 Gene ID= ENSG00000128563.13 TPM= 3.62 Transcript Type= NA chr7 102363897 102426676 102363897 102426676 + ENST00000496391.5@PRKRIP1 ENST00000496391.5 protein_coding 102363897,102365955,102375823,102376212,102395977,102397620,102399548,102404598,102407434,102425014 102364411,102366076,102375949,102376322,102396537,102397698,102399648,102404683,102407498,102426676 Gene ID= ENSG00000128563.13 TPM= 10.87 Transcript Type= protein_coding chr7 102363895 102425449 102363895 102425449 + ENST00000482549.5@PRKRIP1 ENST00000482549.5 protein_coding 102363895,102365974,102375823,102376212,102397620,102399548,102404598,102407434,102425014 102364411,102366076,102375949,102376322,102397698,102399648,102404683,102407498,102425449 Gene ID= ENSG00000128563.13 TPM= 2.26 Transcript Type= processed_transcript chr7 102396363 102426666 102396363 102426666 + ENST00000397912.3@PRKRIP1 ENST00000397912.3 protein_coding 102396363,102397620,102399548,102404598,102407434,102425014 102396537,102397698,102399648,102404683,102407498,102426666 Gene ID= ENSG00000128563.13 TPM= 24.54 Transcript Type= protein_coding chr7 102433513 102451610 102433513 102451610 + transcript3233.chr7.nnic@ORAI2 transcript3233.chr7.nnic protein_coding 102433513,102436184,102438944,102446513 102433661,102436333,102439181,102451610 Gene ID= ENSG00000160991.15 TPM= 14.04 Transcript Type= NA chr7 102433530 102456821 102433530 102456821 + ENST00000356387.6@ORAI2 ENST00000356387.6 protein_coding 102433530,102436202,102438944,102446513 102433661,102436333,102439181,102456821 Gene ID= ENSG00000160991.15 TPM= 3.17 Transcript Type= protein_coding chr7 102433530 102456821 102433530 102456821 + ENST00000611770.4@ORAI2 ENST00000611770.4 protein_coding 102433530,102438944,102446513 102433661,102439181,102456821 Gene ID= ENSG00000160991.15 TPM= 1.81 Transcript Type= protein_coding chr7 102456238 102464876 102456238 102464876 - ENST00000292566.3@ALKBH4 ENST00000292566.3 protein_coding 102464714,102459604,102456238 102464876,102459801,102457981 Gene ID= ENSG00000160993.3 TPM= 26.26 Transcript Type= protein_coding chr7 102464929 102473168 102464929 102473168 + ENST00000292616.9@LRWD1 ENST00000292616.9 protein_coding 102464929,102465817,102466154,102467339,102467719,102468062,102468263,102468554,102468855,102469574,102469742,102472218,102472454,102472692,102472909 102465160,102466051,102466270,102467479,102467823,102468187,102468377,102468654,102469062,102469646,102469882,102472309,102472609,102472804,102473168 Gene ID= ENSG00000161036.12 TPM= 61.58 Transcript Type= protein_coding chr7 102464923 102473167 102464923 102473167 + transcript3287.chr7.nic@LRWD1 transcript3287.chr7.nic protein_coding 102464923,102465817,102466154,102467339,102467719,102468062,102468263,102468855,102469574,102469742,102472218,102472454,102472692,102472909 102465160,102466051,102466270,102467479,102467823,102468187,102468654,102469062,102469646,102469882,102472309,102472609,102472804,102473167 Gene ID= ENSG00000161036.12 TPM= 3.62 Transcript Type= NA chr7 102473118 102478907 102473118 102478907 - ENST00000292614.9@POLR2J ENST00000292614.9 protein_coding 102478808,102476181,102474361,102473118 102478907,102476270,102474535,102473684 Gene ID= ENSG00000005075.15 TPM= 115 Transcript Type= protein_coding chr7 102483144 102517781 102483144 102517781 - ENST00000465829.5@RASA4B ENST00000465829.5 protein_coding 102517646,102511925,102510179,102509599,102506695,102503163,102501096,102500699,102496847,102496469,102496140,102495278,102494881,102494538,102493825,102493116,102490986,102488463,102485039,102483825,102483144 102517781,102511981,102510292,102509660,102506824,102503244,102501227,102500793,102496964,102496619,102496204,102495390,102495073,102494675,102493969,102493285,102491123,102488598,102485159,102483889,102483713 Gene ID= ENSG00000170667.14 TPM= 37.88 Transcript Type= protein_coding chr7 102483139 102517777 102483139 102517777 - ENST00000541662.5@RASA4B ENST00000541662.5 protein_coding 102517646,102511925,102510179,102509599,102506695,102503163,102501096,102500699,102496847,102496469,102496140,102495278,102494881,102494538,102493825,102493116,102488463,102485039,102483825,102483139 102517777,102511981,102510292,102509660,102506824,102503244,102501227,102500793,102496964,102496619,102496204,102495390,102495073,102494675,102493969,102493285,102488598,102485159,102483889,102483713 Gene ID= ENSG00000170667.14 TPM= 5.28 Transcript Type= protein_coding chr7 102566288 102572580 102566288 102572580 - ENST00000613744.4@POLR2J3 ENST00000613744.4 protein_coding 102572472,102569835,102566288 102572580,102569924,102568184 Gene ID= ENSG00000168255.19 TPM= 2.72 Transcript Type= protein_coding chr7 102537920 102572649 102537920 102572649 - ENST00000486319.5@POLR2J3 ENST00000486319.5 protein_coding 102572472,102569835,102566997,102541501,102541093,102540015,102539606,102537920 102572649,102569924,102567083,102541662,102541303,102540091,102539726,102538525 Gene ID= ENSG00000168255.19 TPM= 25.16 Transcript Type= nonsense_mediated_decay chr7 102537919 102572539 102537919 102572539 - ENST00000379340.9@POLR2J3 ENST00000379340.9 protein_coding 102572472,102569835,102568010,102566997,102541501,102541093,102540015,102539606,102537919 102572539,102569924,102568184,102567083,102541662,102541303,102540091,102539726,102538525 Gene ID= ENSG00000168255.19 TPM= 7.05 Transcript Type= nonsense_mediated_decay chr7 102579649 102616779 102579649 102616779 - transcript3255.chr7.nic@RASA4 transcript3255.chr7.nic protein_coding 102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102579649 102616779,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596107,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892 Gene ID= ENSG00000105808.17 TPM= 7.85 Transcript Type= NA chr7 102579649 102616779 102579649 102616779 - transcript3269.chr7.nnic@RASA4 transcript3269.chr7.nnic protein_coding 102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102586955,102584218,102583004,102579649 102616779,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892 Gene ID= ENSG00000105808.17 TPM= 8.45 Transcript Type= NA chr7 102579649 102611809 102579649 102611809 - transcript3278.chr7.nic@RASA4 transcript3278.chr7.nic protein_coding 102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102587635,102584218,102583004,102579649 102611809,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892 Gene ID= ENSG00000105808.17 TPM= 9.35 Transcript Type= NA chr7 102579646 102616757 102579646 102616757 - ENST00000262940.11@RASA4 ENST00000262940.11 protein_coding 102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102579646 102616757,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892 Gene ID= ENSG00000105808.17 TPM= 49.51 Transcript Type= protein_coding chr7 102582325 102616756 102582325 102616756 - ENST00000449970.6@RASA4 ENST00000449970.6 protein_coding 102616625,102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102587635,102584218,102583004,102582325 102616756,102611142,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102587770,102584338,102583068,102582892 Gene ID= ENSG00000105808.17 TPM= 60.97 Transcript Type= protein_coding chr7 102582323 102611591 102582323 102611591 - ENST00000461209.5@RASA4 ENST00000461209.5 protein_coding 102611086,102609341,102608761,102605858,102602324,102600257,102599860,102596012,102595634,102595305,102594447,102594050,102593707,102592994,102592285,102590159,102587635,102584218,102583004,102582323 102611591,102609454,102608822,102605987,102602405,102600388,102599954,102596129,102595784,102595369,102594559,102594242,102593844,102593138,102592454,102590296,102587770,102584338,102583068,102582892 Gene ID= ENSG00000105808.17 TPM= 37.73 Transcript Type= protein_coding chr7 102592977 102691605 102592977 102691605 + transcript3337.chr7.nnic@SPDYE2B transcript3337.chr7.nnic protein_coding 102592977,102593369,102691016 102593174,102595108,102691605 Gene ID= ENSG00000173678.14 TPM= 2.72 Transcript Type= NA chr7 102637049 102671641 102637049 102671641 - ENST00000476151.5@POLR2J2 ENST00000476151.5 protein_coding 102671552,102668915,102667090,102666077,102640612,102640204,102639123,102638714,102637049 102671641,102669004,102667264,102666163,102640773,102640414,102639199,102638834,102637633 Gene ID= ENSG00000267645.5 TPM= 7.85 Transcript Type= nonsense_mediated_decay chr7 102748971 102809225 102748971 102809225 + ENST00000442873.5@FAM185A ENST00000442873.5 protein_coding 102748971,102751692,102757854,102761273,102772409,102777253,102787335,102808290 102749636,102751801,102757946,102761411,102772450,102777348,102787469,102809225 Gene ID= ENSG00000222011.8 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr7 102812861 102973291 102812861 102973291 - transcript3342.chr7.nic@FBXL13 transcript3342.chr7.nic protein_coding 102973150,102968022,102963533,102931881,102926274,102913086,102884214,102883568,102883305,102878331,102877467,102854777,102822040,102812861 102973291,102968117,102963665,102931933,102926374,102913215,102884312,102883685,102883467,102878450,102877593,102854860,102822203,102813531 Gene ID= ENSG00000161040.16 TPM= 4.53 Transcript Type= NA chr7 102973338 102988855 102973338 102988855 + transcript3360.chr7.nnic@NFE4 transcript3360.chr7.nnic protein_coding 102973338,102988033,102988375 102973771,102988232,102988855 Gene ID= ENSG00000230257.2 TPM= 3.62 Transcript Type= NA chr7 103075159 103101590 103075159 103101590 + transcript3369.chr7.nic@ARMC10 transcript3369.chr7.nic protein_coding 103075159,103083682,103086630,103086869,103097277,103098299 103075411,103083830,103086764,103086937,103097348,103101590 Gene ID= ENSG00000170632.13 TPM= 2.72 Transcript Type= NA chr7 103074881 103099758 103074881 103099758 + ENST00000454559.5@ARMC10 ENST00000454559.5 protein_coding 103074881,103083682,103086630,103097277,103098299 103075411,103083830,103086764,103097348,103099758 Gene ID= ENSG00000170632.13 TPM= 20.53 Transcript Type= protein_coding chr7 103074881 103099764 103074881 103099764 + ENST00000323716.7@ARMC10 ENST00000323716.7 protein_coding 103074881,103075777,103083682,103086630,103092477,103097277,103098299 103075411,103075881,103083830,103086764,103092653,103097348,103099764 Gene ID= ENSG00000170632.13 TPM= 20.53 Transcript Type= protein_coding chr7 103074881 103099758 103074881 103099758 + ENST00000441711.6@ARMC10 ENST00000441711.6 protein_coding 103074881,103083682,103086630,103092477,103097277,103098299 103075411,103083830,103086764,103092653,103097348,103099758 Gene ID= ENSG00000170632.13 TPM= 65.81 Transcript Type= protein_coding chr7 103297423 103312411 103297423 103312411 + transcript3392.chr7.nic@PMPCB transcript3392.chr7.nic protein_coding 103297423,103298568,103299443,103300178,103303842,103304411,103308952,103310315,103311643,103311808,103312056 103297558,103298708,103299529,103300307,103304040,103304490,103309095,103310475,103311728,103311896,103312411 Gene ID= ENSG00000105819.13 TPM= 5.43 Transcript Type= NA chr7 103297422 103313235 103297422 103313235 + ENST00000249269.8@PMPCB ENST00000249269.8 protein_coding 103297422,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056,103312207 103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312131,103313235 Gene ID= ENSG00000105819.13 TPM= 140.36 Transcript Type= protein_coding chr7 103297435 103312415 103297435 103312415 + ENST00000428154.5@PMPCB ENST00000428154.5 protein_coding 103297435,103298568,103299443,103300178,103303842,103304411,103307596,103308952,103310315,103311643,103311808,103312056 103297558,103298708,103299529,103300307,103304040,103304490,103307708,103309095,103310475,103311728,103311896,103312415 Gene ID= ENSG00000105819.13 TPM= 2.72 Transcript Type= protein_coding chr7 103312519 103344873 103312519 103344873 - ENST00000379263.7@DNAJC2 ENST00000379263.7 protein_coding 103344559,103341764,103337736,103327656,103326543,103324482,103323598,103322703,103322511,103321932,103319756,103319609,103316830,103315988,103315764,103312947,103312519 103344873,103341954,103337811,103327754,103326684,103324562,103323663,103322794,103322632,103322081,103319844,103319678,103317014,103316088,103315871,103313101,103312643 Gene ID= ENSG00000105821.14 TPM= 19.92 Transcript Type= protein_coding chr7 103344914 103369395 103344914 103369395 + ENST00000435765.5@PSMC2 ENST00000435765.5 protein_coding 103344914,103347524,103353921,103354868,103355694,103361957,103362686,103363344,103364143,103366076,103367413,103367713,103367897 103345136,103347781,103353958,103354949,103355793,103362088,103362758,103363439,103364307,103366163,103367615,103367809,103369395 Gene ID= ENSG00000161057.11 TPM= 84.22 Transcript Type= protein_coding chr7 104126341 104208047 104126341 104208047 - ENST00000297431.8@ORC5 ENST00000297431.8 protein_coding 104207833,104204142,104200758,104197725,104195143,104188251,104184123,104183943,104168473,104166772,104165235,104161072,104136781,104126341 104208047,104204234,104200958,104197799,104195254,104188381,104184171,104184033,104168525,104166884,104165282,104161182,104136893,104126893 Gene ID= ENSG00000164815.10 TPM= 21.28 Transcript Type= protein_coding chr7 104126342 104208037 104126342 104208037 - transcript3400.chr7.nnic@ORC5 transcript3400.chr7.nnic protein_coding 104207833,104204142,104200758,104197725,104195143,104188251,104168473,104166772,104165235,104161072,104136781,104126342 104208037,104204234,104200958,104197799,104195254,104188381,104168525,104166884,104165282,104161182,104136893,104126893 Gene ID= ENSG00000164815.10 TPM= 2.26 Transcript Type= NA chr7 105014189 105102647 105014189 105102647 + transcript3403.chr7.nic@KMT2E transcript3403.chr7.nic protein_coding 105014189,105040839,105062164,105063351,105066727,105073619,105074643,105076043,105076963,105077303,105078846,105081688,105090009,105091216,105101425,105101886 105014535,105041023,105062278,105063580,105066807,105073677,105074815,105076081,105077193,105077433,105078963,105081797,105090273,105091314,105101589,105102647 Gene ID= ENSG00000005483.20 TPM= 4.53 Transcript Type= NA chr7 105116377 105389391 105116377 105389391 - transcript3413.chr7.nic@SRPK2 transcript3413.chr7.nic protein_coding 105389244,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116377 105389391,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022 Gene ID= ENSG00000135250.16 TPM= 3.17 Transcript Type= NA chr7 105115733 105269051 105115733 105269051 - transcript3414.chr7.nic@SRPK2 transcript3414.chr7.nic protein_coding 105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105125782,105115733 105269051,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105125874,105118022 Gene ID= ENSG00000135250.16 TPM= 4.07 Transcript Type= NA chr7 105116376 105388894 105116376 105388894 - ENST00000393651.7@SRPK2 ENST00000393651.7 protein_coding 105388791,105388648,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116376 105388894,105388702,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022 Gene ID= ENSG00000135250.16 TPM= 6.79 Transcript Type= protein_coding chr7 105116377 105269015 105116377 105269015 - ENST00000357311.7@SRPK2 ENST00000357311.7 protein_coding 105268806,105203628,105169157,105168008,105167377,105160507,105146493,105145283,105143084,105142008,105133004,105132791,105126993,105126248,105116377 105269015,105203785,105169265,105168095,105167464,105160613,105146658,105145308,105143330,105142490,105133104,105132898,105127062,105126340,105118022 Gene ID= ENSG00000135250.16 TPM= 3.17 Transcript Type= protein_coding chr7 105456511 105522258 105456511 105522258 - ENST00000356362.6@PUS7 ENST00000356362.6 protein_coding 105522052,105508115,105506189,105505955,105502420,105495142,105491540,105482312,105481052,105472132,105470688,105468337,105465313,105462621,105459168,105456511 105522258,105508520,105506273,105506056,105502564,105495253,105491617,105482440,105481177,105472193,105470848,105468463,105465414,105462750,105459259,105457926 Gene ID= ENSG00000091127.13 TPM= 11.77 Transcript Type= protein_coding chr7 105532085 105567677 105532085 105567677 + ENST00000257700.6@RINT1 ENST00000257700.6 protein_coding 105532085,105532824,105536565,105542408,105546910,105547184,105548554,105550055,105550261,105551570,105555028,105563733,105565277,105565530,105567119 105532357,105532869,105536749,105542649,105547083,105547333,105548710,105550165,105550486,105551707,105555227,105563947,105565457,105565648,105567677 Gene ID= ENSG00000135249.7 TPM= 24.45 Transcript Type= protein_coding chr7 105605067 105876604 105605067 105876604 - ENST00000419735.7@ATXN7L1 ENST00000419735.7 protein_coding 105876378,105875812,105788604,105665066,105642838,105639487,105638353,105624075,105620200,105613862,105610529,105605067 105876604,105875880,105788708,105665288,105643121,105639569,105638609,105624267,105620321,105614816,105610603,105607890 Gene ID= ENSG00000146776.14 TPM= 1.81 Transcript Type= protein_coding chr7 106090503 106112331 106090503 106112331 - ENST00000455385.6@SYPL1 ENST00000455385.6 protein_coding 106112140,106099158,106097690,106092949,106090503 106112331,106099282,106097897,106093137,106091939 Gene ID= ENSG00000008282.8 TPM= 273.77 Transcript Type= protein_coding chr7 106090505 106112576 106090505 106112576 - ENST00000011473.6@SYPL1 ENST00000011473.6 protein_coding 106112479,106112140,106099158,106097690,106092949,106090505 106112576,106112211,106099282,106097897,106093137,106091939 Gene ID= ENSG00000008282.8 TPM= 11.17 Transcript Type= protein_coding chr7 106248290 106284591 106248290 106284591 - transcript3435.chr7.nic@NAMPT transcript3435.chr7.nic protein_coding 106284348,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106248290 106284591,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193 Gene ID= ENSG00000105835.11 TPM= 12.68 Transcript Type= NA chr7 106248285 106285192 106248285 106285192 - ENST00000222553.7@NAMPT ENST00000222553.7 protein_coding 106284828,106277023,106274946,106272530,106269154,106268464,106263392,106261588,106254364,106253017,106248285 106285192,106277179,106275049,106272658,106269312,106268600,106263617,106261707,106254504,106253151,106251193 Gene ID= ENSG00000105835.11 TPM= 84.22 Transcript Type= protein_coding chr7 107044649 107161811 107044649 107161811 + ENST00000265717.4@PRKAR2B ENST00000265717.4 protein_coding 107044649,107070281,107121952,107128212,107140847,107146308,107150922,107153177,107156984,107157186,107159449 107045214,107070316,107122004,107128295,107140953,107146461,107151023,107153251,107157049,107157324,107161811 Gene ID= ENSG00000005249.12 TPM= 183.83 Transcript Type= protein_coding chr7 107168979 107202528 107168979 107202528 + transcript3459.chr7.nic@HBP1 transcript3459.chr7.nic protein_coding 107168979,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160 107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107202528 Gene ID= ENSG00000105856.13 TPM= 4.53 Transcript Type= NA chr7 107169000 107202528 107169000 107202528 + transcript3460.chr7.nic@HBP1 transcript3460.chr7.nic protein_coding 107169000,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160 107169185,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107202528 Gene ID= ENSG00000105856.13 TPM= 4.53 Transcript Type= NA chr7 107168961 107202508 107168961 107202508 + ENST00000468410.5@HBP1 ENST00000468410.5 protein_coding 107168961,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414 107169027,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202508 Gene ID= ENSG00000105856.13 TPM= 70.18 Transcript Type= protein_coding chr7 107169015 107202529 107169015 107202529 + ENST00000222574.8@HBP1 ENST00000222574.8 protein_coding 107169015,107179879,107182373,107185801,107186361,107186569,107189292,107190173,107195834,107200160,107201414 107169185,107180062,107182601,107185942,107186472,107186681,107189448,107190317,107196151,107200301,107202529 Gene ID= ENSG00000105856.13 TPM= 51.16 Transcript Type= protein_coding chr7 107202564 107564514 107202564 107564514 - ENST00000297135.7@COG5 ENST00000297135.7 protein_coding 107563803,107557976,107554285,107548278,107548111,107527237,107412502,107372595,107362308,107362033,107324440,107298142,107283571,107281300,107258273,107256732,107248396,107236450,107230615,107211099,107210526,107202564 107564514,107558115,107554342,107548332,107548180,107527357,107412632,107372760,107362420,107362110,107324521,107298346,107283732,107281399,107258383,107256794,107248499,107236687,107230691,107211225,107210605,107203630 Gene ID= ENSG00000164597.13 TPM= 20.83 Transcript Type= protein_coding chr7 107563955 107578519 107563955 107578519 + transcript3473.chr7.nnic@DUS4L transcript3473.chr7.nnic protein_coding 107563955,107567050,107571145,107573704,107575188,107576366,107577313 107564209,107567186,107571266,107573821,107575310,107576592,107578519 Gene ID= ENSG00000105865.10 TPM= 1.81 Transcript Type= NA chr7 107563965 107578417 107563965 107578417 + transcript3475.chr7.nic@DUS4L transcript3475.chr7.nic protein_coding 107563965,107564588,107567050,107571145,107575188,107576366,107577313 107564209,107564676,107567186,107571266,107575310,107576592,107578417 Gene ID= ENSG00000105865.10 TPM= 2.72 Transcript Type= NA chr7 107563955 107578571 107563955 107578571 + transcript3480.chr7.nnic@DUS4L transcript3480.chr7.nnic protein_coding 107563955,107567050,107571145,107575188,107576366,107577313 107564209,107567186,107571266,107575310,107576592,107578571 Gene ID= ENSG00000105865.10 TPM= 1.81 Transcript Type= NA chr7 107579977 107621870 107579977 107621870 + ENST00000005259.8@BCAP29 ENST00000005259.8 protein_coding 107579977,107580759,107583882,107593955,107595867,107600397,107613332,107618328 107580301,107580864,107583982,107594105,107596002,107600505,107613432,107621870 Gene ID= ENSG00000075790.10 TPM= 50.71 Transcript Type= protein_coding chr7 107580258 107623317 107580258 107623317 + transcript3470.chr7.nic@BCAP29 transcript3470.chr7.nic protein_coding 107580258,107580759,107583882,107593955,107595867,107600397,107613332,107621630 107580301,107580864,107583982,107594105,107596002,107600505,107613432,107623317 Gene ID= ENSG00000075790.10 TPM= 3.62 Transcript Type= NA chr7 107743697 107761667 107743697 107761667 + ENST00000440859.7@CBLL1 ENST00000440859.7 protein_coding 107743697,107748880,107753411,107753895,107755418,107758143 107744176,107749047,107753511,107753978,107755491,107761667 Gene ID= ENSG00000105879.11 TPM= 10.87 Transcript Type= protein_coding chr7 107890970 107921203 107890970 107921203 + ENST00000205402.9@DLD ENST00000205402.9 protein_coding 107890970,107893200,107901738,107902325,107903478,107904958,107905361,107906267,107915506,107916794,107917273,107917924,107919010,107919194 107891289,107893278,107901817,107902393,107903547,107905058,107905504,107906368,107915696,107916964,107917462,107918061,107919099,107921203 Gene ID= ENSG00000091140.13 TPM= 291.59 Transcript Type= protein_coding chr7 107891173 107919713 107891173 107919713 + ENST00000440410.5@DLD ENST00000440410.5 protein_coding 107891173,107893200,107901738,107903478,107904958,107905361,107906267,107915506,107916794,107917273,107917924,107919010,107919194 107891289,107893278,107901817,107903547,107905058,107905504,107906368,107915696,107916964,107917462,107918061,107919099,107919713 Gene ID= ENSG00000091140.13 TPM= 1.81 Transcript Type= protein_coding chr7 107923799 108003128 107923799 108003128 - transcript3500.chr7.nic@LAMB1 transcript3500.chr7.nic protein_coding 108002849,108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923799 108003128,108001733,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087 Gene ID= ENSG00000091136.13 TPM= 15.39 Transcript Type= NA chr7 107942433 108003191 107942433 108003191 - transcript3502.chr7.nic@LAMB1 transcript3502.chr7.nic protein_coding 108003111,108002849,108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107942433 108003191,108002971,108001733,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107942619 Gene ID= ENSG00000091136.13 TPM= 2.26 Transcript Type= NA chr7 107923818 108003255 107923818 108003255 - ENST00000222399.10@LAMB1 ENST00000222399.10 protein_coding 108003111,108002849,108001558,107998357,107994887,107986175,107986022,107980609,107978047,107975689,107975234,107974986,107972992,107964552,107962905,107961549,107961206,107960445,107959691,107959249,107955467,107953530,107952009,107951226,107939989,107937093,107935415,107932174,107931356,107929412,107929064,107926183,107924230,107923818 108003255,108002971,108001733,107998492,107994960,107986363,107986085,107980811,107978167,107975877,107975413,107975098,107973071,107964687,107963063,107961676,107961329,107960649,107959834,107959480,107955630,107953754,107952223,107951322,107940358,107937277,107935656,107932377,107931500,107929619,107929205,107926359,107924389,107924087 Gene ID= ENSG00000091136.13 TPM= 37.58 Transcript Type= protein_coding chr7 108147645 108456397 108147645 108456397 - transcript3506.chr7.nnic@NRCAM transcript3506.chr7.nnic protein_coding 108456243,108399436,108312665,108239959,108234583,108232326,108231031,108226208,108225645,108223725,108209421,108207528,108197956,108195761,108194262,108194024,108191729,108189645,108184417,108184241,108182695,108181822,108180223,108177990,108176430,108160361,108159463,108150695,108147645 108456397,108399593,108312731,108240170,108234688,108232522,108231153,108226378,108225701,108223836,108209605,108207659,108198099,108195872,108194428,108194171,108191853,108189746,108184614,108184311,108182920,108181937,108180427,108178112,108176606,108160492,108159541,108150706,108150147 Gene ID= ENSG00000091129.19 TPM= 5.43 Transcript Type= NA chr7 108147645 108456450 108147645 108456450 - transcript3507.chr7.nnic@NRCAM transcript3507.chr7.nnic protein_coding 108456243,108399436,108312665,108239959,108234583,108232326,108231031,108226208,108225645,108223725,108209421,108207528,108197956,108195761,108194262,108194024,108191729,108189645,108184417,108184241,108182695,108181822,108180223,108177990,108176430,108160361,108159463,108150695,108147645 108456450,108399593,108312731,108240170,108234688,108232522,108231153,108226378,108225701,108223836,108209605,108207659,108198099,108195872,108194428,108194171,108191853,108189746,108184614,108184311,108182920,108181937,108180427,108178112,108176606,108160492,108159541,108150753,108150147 Gene ID= ENSG00000091129.19 TPM= 12.68 Transcript Type= NA chr7 108147639 108456334 108147639 108456334 - transcript3513.chr7.nnic@NRCAM transcript3513.chr7.nnic protein_coding 108456243,108399436,108312665,108234583,108232326,108231031,108226208,108225645,108223725,108209421,108207528,108197956,108195761,108194262,108194024,108191729,108189645,108184417,108184241,108182695,108181822,108180223,108177990,108176430,108160361,108159463,108147639 108456334,108399593,108312731,108234688,108232522,108231153,108226378,108225701,108223836,108209605,108207659,108198099,108195872,108194428,108194171,108191853,108189746,108184614,108184311,108182920,108181937,108180427,108178112,108176606,108160492,108159541,108150147 Gene ID= ENSG00000091129.19 TPM= 4.98 Transcript Type= NA chr7 108158362 108456397 108158362 108456397 - transcript3516.chr7.nic@NRCAM transcript3516.chr7.nic protein_coding 108456243,108399436,108312665,108239959,108234583,108232326,108231031,108226208,108225645,108223725,108209421,108207528,108197956,108195761,108194262,108194024,108191729,108189645,108184417,108184241,108182695,108181822,108180223,108177990,108176430,108160361,108158362 108456397,108399593,108312731,108240170,108234688,108232522,108231153,108226378,108225701,108223836,108209605,108207659,108198099,108195872,108194428,108194171,108191853,108189746,108184614,108184311,108182920,108181937,108180427,108178112,108176606,108160492,108159541 Gene ID= ENSG00000091129.19 TPM= 2.72 Transcript Type= NA chr7 108147662 108456339 108147662 108456339 - ENST00000351718.8@NRCAM ENST00000351718.8 protein_coding 108456243,108399436,108312665,108239959,108234583,108232326,108231031,108226208,108225645,108223725,108209421,108207528,108197956,108195761,108194262,108194024,108191729,108189645,108184417,108184241,108182695,108181822,108180223,108177990,108176430,108160361,108159463,108147662 108456339,108399593,108312731,108240170,108234688,108232522,108231153,108226378,108225701,108223836,108209605,108207659,108198099,108195872,108194428,108194171,108191853,108189746,108184614,108184311,108182920,108181937,108180427,108178112,108176606,108160492,108159541,108150147 Gene ID= ENSG00000091129.19 TPM= 25.81 Transcript Type= protein_coding chr7 108471610 108526167 108471610 108526167 - transcript3519.chr7.nic@PNPLA8 transcript3519.chr7.nic protein_coding 108526029,108521476,108514436,108514144,108502491,108497483,108496584,108491410,108487759,108479184,108471610 108526167,108521521,108515447,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675 Gene ID= ENSG00000135241.16 TPM= 7.24 Transcript Type= NA chr7 108471633 108526337 108471633 108526337 - transcript3523.chr7.nic@PNPLA8 transcript3523.chr7.nic protein_coding 108526029,108521476,108514436,108514144,108502491,108497483,108496584,108491410,108487945,108479184,108471633 108526337,108521521,108515574,108514293,108502642,108497577,108496755,108491467,108487953,108479379,108472675 Gene ID= ENSG00000135241.16 TPM= 5.43 Transcript Type= NA chr7 108562227 108569723 108562227 108569723 - ENST00000415914.3@THAP5 ENST00000415914.3 protein_coding 108569490,108565830,108562227 108569723,108566022,108565105 Gene ID= ENSG00000177683.13 TPM= 10.87 Transcript Type= protein_coding chr7 108569568 108574850 108569568 108574850 + ENST00000249356.3@DNAJB9 ENST00000249356.3 protein_coding 108569568,108571717,108572899 108570103,108571943,108574850 Gene ID= ENSG00000128590.4 TPM= 86.93 Transcript Type= protein_coding chr7 111091006 111125451 111091006 111125451 + ENST00000451085.5@LRRN3 ENST00000451085.5 protein_coding 111091006,111097027,111099881,111122415 111091504,111097133,111099962,111125451 Gene ID= ENSG00000173114.12 TPM= 9.06 Transcript Type= protein_coding chr7 111091032 111125454 111091032 111125454 + ENST00000422987.3@LRRN3 ENST00000422987.3 protein_coding 111091032,111122415 111091504,111125454 Gene ID= ENSG00000173114.12 TPM= 22.64 Transcript Type= protein_coding chr7 111487236 111562465 111487236 111562465 - transcript3543.chr7.nnic@IMMP2L transcript3543.chr7.nnic protein_coding 111562260,111561851,111521313,111487236 111562465,111561923,111521449,111487341 Gene ID= ENSG00000184903.9 TPM= 1.81 Transcript Type= NA chr7 111487236 111562472 111487236 111562472 - transcript3544.chr7.nic@IMMP2L transcript3544.chr7.nic protein_coding 111561851,111521313,111487236 111562472,111521449,111487341 Gene ID= ENSG00000184903.9 TPM= 2.72 Transcript Type= NA chr7 111759926 112004132 111759926 112004132 - transcript3548.chr7.nic@DOCK4 transcript3548.chr7.nic protein_coding 112004048,112000494,111998448,111994135,111989015,111984306,111977132,111945717,111944811,111940110,111935540,111915779,111901677,111900374,111895612,111877030,111872467,111872269,111871990,111869574,111867984,111863372,111846999,111844763,111834588,111822362,111811874,111809301,111808821,111790457,111788662,111783857,111782864,111778276,111769529,111767032,111765118,111759926 112004132,112000534,111998503,111994231,111989163,111984390,111977283,111945798,111944871,111940242,111935628,111915904,111901801,111900536,111895718,111877186,111872564,111872352,111872090,111869655,111868154,111863564,111847126,111844897,111834686,111822456,111811949,111809401,111808879,111790605,111788747,111783952,111782924,111778369,111769677,111767118,111765222,111760322 Gene ID= ENSG00000128512.20 TPM= 1.81 Transcript Type= NA chr7 112206588 112343096 112206588 112343096 + ENST00000361822.7@ZNF277 ENST00000361822.7 protein_coding 112206588,112286873,112295869,112296229,112318182,112327717,112330084,112336104,112337730,112339843,112340872,112342561 112206807,112287074,112295957,112296311,112318273,112327827,112330216,112336171,112337826,112339885,112341046,112343096 Gene ID= ENSG00000198839.9 TPM= 16.3 Transcript Type= protein_coding chr7 112450428 112476192 112450428 112476192 + ENST00000403825.7@IFRD1 ENST00000403825.7 protein_coding 112450428,112455763,112456002,112456914,112458861,112461866,112462001,112462270,112467981,112472219,112472766,112475430 112450782,112455867,112456086,112457038,112459018,112461916,112462179,112462378,112468115,112472347,112472861,112476192 Gene ID= ENSG00000006652.13 TPM= 28.07 Transcript Type= protein_coding chr7 112762382 112790592 112762382 112790592 - ENST00000312814.10@TMEM168 ENST00000312814.10 protein_coding 112790160,112783698,112775176,112772781,112762382 112790592,112784953,112775318,112773055,112767744 Gene ID= ENSG00000146802.12 TPM= 31.69 Transcript Type= protein_coding chr7 112819147 112939916 112819147 112939916 - ENST00000297145.8@BMT2 ENST00000297145.8 protein_coding 112939591,112915306,112895569,112832561,112819147 112939916,112915447,112895739,112832675,112822373 Gene ID= ENSG00000164603.11 TPM= 4.53 Transcript Type= protein_coding chr7 113116718 113118613 113116718 113118613 - ENST00000397764.7@SMIM30 ENST00000397764.7 protein_coding 113118528,113118068,113116718 113118613,113118161,113117607 Gene ID= ENSG00000214194.8 TPM= 51.62 Transcript Type= protein_coding chr7 114921719 115019919 114921719 115019919 + transcript3572.chr7.nnic@MDFIC transcript3572.chr7.nnic protein_coding 114921719,114922927,114942275,114979506,115015688 114921864,114923127,114942397,114979781,115019919 Gene ID= ENSG00000135272.10 TPM= 12.22 Transcript Type= NA chr7 116210493 116258783 116210493 116258783 + ENST00000358204.8@TES ENST00000358204.8 protein_coding 116210493,116234534,116249020,116250161,116251760,116252318,116257294 116210734,116234619,116249272,116250496,116251975,116252476,116258783 Gene ID= ENSG00000135269.17 TPM= 10.26 Transcript Type= protein_coding chr7 116210539 116258786 116210539 116258786 + transcript3583.chr7.nic@TES transcript3583.chr7.nic protein_coding 116210539,116234534,116249020,116251760,116252318,116257294 116210734,116234619,116250496,116251975,116252476,116258786 Gene ID= ENSG00000135269.17 TPM= 2.11 Transcript Type= NA chr7 116210539 116258786 116210539 116258786 + transcript3584.chr7.nic@TES transcript3584.chr7.nic protein_coding 116210539,116249020,116250161,116251760,116252318,116257294 116210734,116249272,116250496,116251975,116252476,116258786 Gene ID= ENSG00000135269.17 TPM= 3.02 Transcript Type= NA chr7 116499390 116508541 116499390 116508541 + ENST00000222693.4@CAV2 ENST00000222693.4 protein_coding 116499390,116500260,116505971 116499931,116500447,116508541 Gene ID= ENSG00000105971.14 TPM= 34.41 Transcript Type= protein_coding chr7 116524785 116561176 116524785 116561176 + ENST00000341049.6@CAV1 ENST00000341049.6 protein_coding 116524785,116526525,116558946 116525092,116526689,116561176 Gene ID= ENSG00000105974.11 TPM= 7.24 Transcript Type= protein_coding chr7 116526293 116561176 116526293 116561176 + ENST00000393467.1@CAV1 ENST00000393467.1 protein_coding 116526293,116558946 116526689,116561176 Gene ID= ENSG00000105974.11 TPM= 7.24 Transcript Type= protein_coding chr7 116862473 116922049 116862473 116922049 + ENST00000361183.7@CAPZA2 ENST00000361183.7 protein_coding 116862473,116888127,116892994,116898772,116904177,116906263,116910233,116912069,116916060,116917727 116862650,116888190,116893045,116898835,116904383,116906342,116910311,116912140,116916122,116922049 Gene ID= ENSG00000198898.13 TPM= 297.02 Transcript Type= protein_coding chr7 117020173 117230186 117020173 117230186 + transcript3605.chr7.nic@ST7 transcript3605.chr7.nic protein_coding 117020173,117098613,117099762,117119561,117129793,117130491,117131885,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762 117020629,117098815,117099844,117119720,117129847,117130606,117131960,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230186 Gene ID= ENSG00000004866.20 TPM= 2.34 Transcript Type= NA chr7 116953342 117230103 116953342 117230103 + ENST00000393451.7@ST7 ENST00000393451.7 protein_coding 116953342,117099762,117119561,117129793,117130491,117131885,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762 116953691,117099844,117119720,117129847,117130606,117131960,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103 Gene ID= ENSG00000004866.20 TPM= 15.92 Transcript Type= protein_coding chr7 116953327 117223907 116953327 117223907 + ENST00000265437.9@ST7 ENST00000265437.9 protein_coding 116953327,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117222861 116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117223907 Gene ID= ENSG00000004866.20 TPM= 4.98 Transcript Type= protein_coding chr7 116953379 117230103 116953379 117230103 + ENST00000323984.7@ST7 ENST00000323984.7 protein_coding 116953379,117099762,117119561,117129793,117130491,117131885,117134124,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762 116953691,117099844,117119720,117129847,117130606,117131960,117134192,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103 Gene ID= ENSG00000004866.20 TPM= 6.11 Transcript Type= protein_coding chr7 117014888 117230103 117014888 117230103 + ENST00000422922.5@ST7 ENST00000422922.5 protein_coding 117014888,117099762,117119561,117129793,117130491,117131885,117136081,117138435,117170862,117189321,117190834,117209787,117219084,117221923,117229762 117015014,117099844,117119720,117129847,117130606,117131960,117136235,117138532,117170976,117189393,117190936,117209937,117219176,117222062,117230103 Gene ID= ENSG00000004866.20 TPM= 1.43 Transcript Type= protein_coding chr7 118184144 118192155 118184144 118192155 + ENST00000424702.1@LSM8 ENST00000424702.1 protein_coding 118184144,118185654,118188278 118184254,118185694,118192155 Gene ID= ENSG00000128534.7 TPM= 1.81 Transcript Type= protein_coding chr7 120787318 120858472 120787318 120858472 - transcript3618.chr7.nnic@TSPAN12 transcript3618.chr7.nnic protein_coding 120858445,120858234,120857820,120856698,120840027,120838777,120815729,120814005,120810463,120806549,120787318 120858472,120858328,120857988,120856833,120840109,120838912,120815803,120814247,120810570,120806692,120788897 Gene ID= ENSG00000106025.8 TPM= 2.26 Transcript Type= NA chr7 120787318 120858165 120787318 120858165 - transcript3619.chr7.nic@TSPAN12 transcript3619.chr7.nic protein_coding 120857820,120856698,120840027,120838777,120815729,120814005,120810463,120806549,120787318 120858165,120856833,120840109,120838912,120815803,120814247,120810570,120806692,120788897 Gene ID= ENSG00000106025.8 TPM= 4.98 Transcript Type= NA chr7 120787318 120857352 120787318 120857352 - transcript3623.chr7.nic@TSPAN12 transcript3623.chr7.nic protein_coding 120857233,120856698,120840027,120838777,120815729,120810463,120806549,120787318 120857352,120856833,120840109,120838912,120815803,120810570,120806692,120788897 Gene ID= ENSG00000106025.8 TPM= 7.7 Transcript Type= NA chr7 120787320 120858357 120787320 120858357 - ENST00000222747.7@TSPAN12 ENST00000222747.7 protein_coding 120857820,120856698,120840027,120838777,120815729,120810463,120806549,120787320 120858357,120856833,120840109,120838912,120815803,120810570,120806692,120788897 Gene ID= ENSG00000106025.8 TPM= 59.31 Transcript Type= protein_coding chr7 120855112 120858273 120855112 120858273 - transcript3628.chr7.nnic@TSPAN12 transcript3628.chr7.nnic protein_coding 120858204,120857820,120856698,120855112 120858273,120857988,120856833,120855381 Gene ID= ENSG00000106025.8 TPM= 6.34 Transcript Type= NA chr7 120855112 120857352 120855112 120857352 - transcript3630.chr7.nnic@TSPAN12 transcript3630.chr7.nnic protein_coding 120857233,120856698,120855112 120857352,120856833,120855381 Gene ID= ENSG00000106025.8 TPM= 2.72 Transcript Type= NA chr7 120855112 120858165 120855112 120858165 - transcript3632.chr7.nnic@TSPAN12 transcript3632.chr7.nnic protein_coding 120857820,120856698,120855112 120858165,120856833,120855381 Gene ID= ENSG00000106025.8 TPM= 10.87 Transcript Type= NA chr7 120950749 120977216 120950749 120977216 + ENST00000315870.9@ING3 ENST00000315870.9 protein_coding 120950749,120951164,120953304,120955559,120964742,120966626,120967529,120967934,120969011,120970688,120973205,120974728 120950924,120951235,120953404,120955624,120964838,120966697,120967648,120968091,120969204,120970880,120973243,120977216 Gene ID= ENSG00000071243.15 TPM= 9.06 Transcript Type= protein_coding chr7 120950763 120956980 120950763 120956980 + ENST00000339121.9@ING3 ENST00000339121.9 protein_coding 120950763,120951164,120953304,120955559,120956160 120950924,120951235,120953404,120955624,120956980 Gene ID= ENSG00000071243.15 TPM= 2.72 Transcript Type= protein_coding chr7 120988677 121297444 120988677 121297444 + ENST00000310396.9@CPED1 ENST00000310396.9 protein_coding 120988677,120989391,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440 120988912,120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297444 Gene ID= ENSG00000106034.17 TPM= 12.68 Transcript Type= protein_coding chr7 120988715 121297447 120988715 121297447 + transcript3643.chr7.nic@CPED1 transcript3643.chr7.nic protein_coding 120988715,121015665,121046887,121064238,121097699,121099926,121124331,121125820,121127090,121128382,121130125,121133823,121136040,121140827,121141973,121236714,121244202,121266227,121266707,121267215,121271284,121295440 120989870,121015848,121046993,121064313,121097831,121100094,121124473,121125892,121127257,121128486,121130294,121133893,121136090,121141013,121142141,121236831,121244338,121266447,121266808,121267302,121271430,121297447 Gene ID= ENSG00000106034.17 TPM= 11.77 Transcript Type= NA chr7 120989175 121052013 120989175 121052013 + ENST00000495036.5@CPED1 ENST00000495036.5 protein_coding 120989175,121015665,121046887,121050803 120989870,121015848,121046993,121052013 Gene ID= ENSG00000106034.17 TPM= 2.72 Transcript Type= processed_transcript chr7 121348851 121396334 121348851 121396334 - ENST00000359943.7@FAM3C ENST00000359943.7 protein_coding 121396162,121382957,121378910,121372110,121371300,121364130,121362897,121360043,121351143,121348851 121396334,121383010,121379014,121372139,121371423,121364188,121362947,121360127,121351269,121350550 Gene ID= ENSG00000196937.10 TPM= 104.14 Transcript Type= protein_coding chr7 122076242 122144280 122076242 122144280 - ENST00000417368.6@AASS ENST00000417368.6 protein_coding 122144161,122133517,122129361,122126375,122118563,122118307,122116879,122116633,122115074,122113598,122113118,122101621,122101371,122098745,122098450,122093048,122092843,122091703,122086012,122081500,122079597,122078862,122077838,122076242 122144280,122133741,122129537,122126459,122118630,122118453,122116957,122116760,122115222,122113720,122113229,122101680,122101438,122098866,122098576,122093158,122092951,122091843,122086179,122081595,122079712,122078950,122078014,122076607 Gene ID= ENSG00000008311.14 TPM= 9.96 Transcript Type= protein_coding chr7 122319326 122886693 122319326 122886693 - transcript3662.chr7.nic@CADPS2 transcript3662.chr7.nic protein_coding 122885999,122736955,122663237,122629248,122621481,122615181,122581179,122554550,122513249,122491312,122490081,122474381,122471375,122451374,122441512,122438341,122436360,122416061,122407540,122393441,122388583,122387026,122386295,122379368,122360930,122360788,122345574,122325477,122319326 122886693,122737068,122663569,122629328,122621717,122615299,122581290,122554689,122513315,122491420,122490281,122474517,122471562,122451475,122441575,122438464,122436380,122416164,122407696,122393582,122388738,122387173,122386309,122379442,122361013,122360820,122345681,122325581,122320338 Gene ID= ENSG00000081803.15 TPM= 4.53 Transcript Type= NA chr7 123681935 123749067 123681935 123749067 - ENST00000223023.4@WASL ENST00000223023.4 protein_coding 123748618,123709089,123706740,123706277,123704634,123696579,123695823,123694715,123692347,123689042,123681935 123749067,123709223,123706826,123706373,123704657,123696747,123695865,123694868,123692867,123689150,123684580 Gene ID= ENSG00000106299.7 TPM= 18.11 Transcript Type= protein_coding chr7 124822386 124929981 124822386 124929981 - ENST00000357628.7@POT1 ENST00000357628.7 protein_coding 124929794,124928815,124915574,124898261,124897165,124892266,124870911,124863350,124858957,124852972,124851872,124846942,124842807,124840973,124835279,124829254,124827214,124825252,124822386 124929981,124928999,124915646,124898374,124897212,124892380,124871041,124863640,124859112,124853138,124851951,124846998,124842963,124841178,124835414,124829342,124827305,124825357,124824074 Gene ID= ENSG00000128513.14 TPM= 5.43 Transcript Type= protein_coding chr7 124822387 124929983 124822387 124929983 - ENST00000393329.5@POT1 ENST00000393329.5 protein_coding 124929794,124928815,124915574,124898261,124897165,124892266,124863350,124858957,124852972,124851872,124846942,124842807,124840973,124835279,124829254,124827214,124825252,124822387 124929983,124928999,124915646,124898374,124897212,124892380,124863640,124859112,124853138,124851951,124846998,124842963,124841178,124835414,124829342,124827305,124825357,124824074 Gene ID= ENSG00000128513.14 TPM= 2.72 Transcript Type= protein_coding chr7 127580618 127585607 127580618 127585607 - ENST00000321407.2@GCC1 ENST00000321407.2 protein_coding 127584151,127580618 127585607,127583309 Gene ID= ENSG00000179562.2 TPM= 61.58 Transcript Type= protein_coding chr7 127588345 127591705 127588345 127591705 + ENST00000000233.9@ARF5 ENST00000000233.9 protein_coding 127588345,127589083,127589485,127590066,127590963,127591213 127588565,127589163,127589594,127590137,127591088,127591705 Gene ID= ENSG00000004059.10 TPM= 153.94 Transcript Type= protein_coding chr7 127588386 127591681 127588386 127591681 + ENST00000463733.5@ARF5 ENST00000463733.5 protein_coding 127588386,127589083,127589485,127590963,127591213 127588565,127589163,127590137,127591088,127591681 Gene ID= ENSG00000004059.10 TPM= 4.53 Transcript Type= retained_intron chr7 127652180 128092607 127652180 128092607 + ENST00000354725.7@SND1 ENST00000354725.7 protein_coding 127652180,127686613,127694828,127698875,127701163,127702435,127703165,127704839,127707557,127721287,127807484,127844324,127887902,127904747,127929188,127990947,128074502,128081360,128084724,128085711,128086938,128089489,128091837,128091993 127652451,127686762,127694948,127698953,127701323,127702526,127703323,127704945,127707647,127721400,127807573,127844424,127888012,127904819,127929329,127991056,128074690,128081501,128084847,128085780,128087051,128089692,128091881,128092607 Gene ID= ENSG00000197157.10 TPM= 385.99 Transcript Type= protein_coding chr7 128297685 128343908 128297685 128343908 - ENST00000223073.6@RBM28 ENST00000223073.6 protein_coding 128343676,128339633,128339227,128338726,128338250,128337131,128335847,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128297685 128343908,128339791,128339321,128338801,128338342,128337202,128336042,128335679,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931 Gene ID= ENSG00000106344.8 TPM= 19.02 Transcript Type= protein_coding chr7 128310384 128343911 128310384 128343911 - transcript3714.chr7.nnic@RBM28 transcript3714.chr7.nnic protein_coding 128343676,128339633,128339227,128338726,128338250,128337131,128335543,128333290,128330819,128324796,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310384 128343911,128339791,128339321,128338801,128338342,128337202,128336042,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931 Gene ID= ENSG00000106344.8 TPM= 1.81 Transcript Type= NA chr7 128310384 128343911 128310384 128343911 - transcript3715.chr7.nic@RBM28 transcript3715.chr7.nic protein_coding 128343676,128339633,128339227,128338726,128338250,128337131,128335543,128333290,128330819,128325818,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310384 128343911,128339791,128339321,128338801,128338342,128337202,128336042,128333362,128330928,128325891,128324694,128323591,128321424,128318106,128317733,128315020,128313274,128310931 Gene ID= ENSG00000106344.8 TPM= 2.72 Transcript Type= NA chr7 128310384 128343911 128310384 128343911 - transcript3718.chr7.nic@RBM28 transcript3718.chr7.nic protein_coding 128343676,128339633,128339227,128338726,128338250,128337131,128335543,128333290,128330819,128324559,128323527,128321266,128317957,128317659,128314764,128313175,128310384 128343911,128339791,128339321,128338801,128338342,128337202,128336042,128333362,128330928,128325891,128323591,128321424,128318106,128317733,128315020,128313274,128310931 Gene ID= ENSG00000106344.8 TPM= 1.81 Transcript Type= NA chr7 128392277 128410252 128392277 128410252 - ENST00000338791.10@IMPDH1 ENST00000338791.10 protein_coding 128409756,128409441,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392277 128410252,128409484,128409352,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028 Gene ID= ENSG00000106348.16 TPM= 2.52 Transcript Type= protein_coding chr7 128392278 128409982 128392278 128409982 - ENST00000354269.9@IMPDH1 ENST00000354269.9 protein_coding 128409756,128409289,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392278 128409982,128409366,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028 Gene ID= ENSG00000106348.16 TPM= 3.42 Transcript Type= protein_coding chr7 128392279 128410007 128392279 128410007 - transcript3729.chr7.nic@IMPDH1 transcript3729.chr7.nic protein_coding 128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128393722,128392279 128410007,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393738,128393028 Gene ID= ENSG00000106348.16 TPM= 3.92 Transcript Type= NA chr7 128392277 128410000 128392277 128410000 - transcript3732.chr7.nnic@IMPDH1 transcript3732.chr7.nnic protein_coding 128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392277 128410000,128406197,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028 Gene ID= ENSG00000106348.16 TPM= 34.21 Transcript Type= NA chr7 128392301 128409982 128392301 128409982 - ENST00000348127.10@IMPDH1 ENST00000348127.10 protein_coding 128409756,128405767,128403706,128401015,128400817,128400333,128400095,128398414,128396932,128396600,128395131,128394889,128394456,128394278,128392301 128409982,128405865,128403754,128401116,128400891,128400539,128400182,128398613,128397022,128396695,128395274,128395033,128394599,128394361,128393028 Gene ID= ENSG00000106348.16 TPM= 31.88 Transcript Type= protein_coding chr7 128455891 128458416 128455891 128458416 + ENST00000257696.4@HILPDA ENST00000257696.4 protein_coding 128455891,128457201 128456023,128458416 Gene ID= ENSG00000135245.9 TPM= 18.11 Transcript Type= protein_coding chr7 128476754 128504076 128476754 128504076 + transcript3736.chr7.nic@METTL2B transcript3736.chr7.nic protein_coding 128476754,128477082,128479158,128480647,128488101,128493804,128498036,128500903,128501762,128502614 128476875,128477173,128479513,128480696,128488161,128493943,128498142,128500968,128501832,128504076 Gene ID= ENSG00000165055.15 TPM= 2.26 Transcript Type= NA chr7 128476750 128503805 128476750 128503805 + transcript3738.chr7.nic@METTL2B transcript3738.chr7.nic protein_coding 128476750,128479158,128480647,128488101,128493804,128498036,128500903,128501762,128502614 128477173,128479513,128480696,128488161,128493943,128498142,128500968,128501832,128503805 Gene ID= ENSG00000165055.15 TPM= 2.26 Transcript Type= NA chr7 128739342 128771474 128739342 128771474 + ENST00000249364.8@CALU ENST00000249364.8 protein_coding 128739342,128748573,128754262,128758871,128759792,128767456,128769063 128739432,128748804,128754455,128759037,128759852,128767655,128771474 Gene ID= ENSG00000128595.16 TPM= 131.76 Transcript Type= protein_coding chr7 128739363 128770576 128739363 128770576 + ENST00000449187.6@CALU ENST00000449187.6 protein_coding 128739363,128748573,128754529,128758871,128759792,128767456,128769063 128739432,128748804,128754722,128759037,128759852,128767655,128770576 Gene ID= ENSG00000128595.16 TPM= 7.7 Transcript Type= protein_coding chr7 128862826 128865843 128862826 128865843 + ENST00000249289.4@ATP6V1F ENST00000249289.4 protein_coding 128862826,128865377 128863062,128865843 Gene ID= ENSG00000128524.4 TPM= 169.34 Transcript Type= protein_coding chr7 128937925 128950037 128937925 128950037 + transcript3765.chr7.nic@IRF5 transcript3765.chr7.nic protein_coding 128937925,128942071,128945845,128946501,128947023,128947278,128947337,128947729,128948210,128948573 128938049,128942276,128946034,128946562,128947056,128947306,128947535,128948121,128948328,128950037 Gene ID= ENSG00000128604.19 TPM= 3.17 Transcript Type= NA chr7 128937989 128950035 128937989 128950035 + ENST00000402030.6@IRF5 ENST00000402030.6 protein_coding 128937989,128942071,128945845,128946501,128947023,128947278,128947729,128948210,128948573 128938049,128942276,128946034,128946562,128947056,128947535,128948121,128948328,128950035 Gene ID= ENSG00000128604.19 TPM= 3.17 Transcript Type= protein_coding chr7 129225050 129430211 129225050 129430211 + ENST00000446544.6@AHCYL2 ENST00000446544.6 protein_coding 129225050,129379641,129389056,129389634,129397222,129400290,129403379,129405097,129405836,129406378,129409476,129413594,129422840,129424874,129425063,129426443,129427039 129225439,129379749,129389199,129389734,129397324,129400384,129403485,129405213,129405899,129406466,129409546,129413688,129422938,129424942,129425141,129426563,129430211 Gene ID= ENSG00000158467.16 TPM= 8.15 Transcript Type= protein_coding chr7 129434446 129483631 129434446 129483631 + ENST00000435494.2@STRIP2 ENST00000435494.2 protein_coding 129434446,129440022,129444024,129451613,129453227,129454142,129454421,129455244,129456439,129458215,129458712,129459517,129460301,129462966,129464044,129464612,129467350,129470649,129480785,129482842 129434601,129440091,129444098,129451747,129453347,129454210,129454527,129455371,129456642,129458450,129458777,129459580,129460372,129463040,129464141,129464738,129467450,129470715,129480889,129483631 Gene ID= ENSG00000128578.9 TPM= 1.81 Transcript Type= protein_coding chr7 129502479 129512932 129502479 129512932 + ENST00000462322.2@SMKR1 ENST00000462322.2 protein_coding 129502479,129512247 129502827,129512932 Gene ID= ENSG00000240204.2 TPM= 1.81 Transcript Type= protein_coding chr7 129611756 129756015 129611756 129756015 + ENST00000223190.8@NRF1 ENST00000223190.8 protein_coding 129611756,129657343,129671429,129677632,129690406,129709075,129710374,129711475,129717219,129727241,129755018 129611824,129657574,129671543,129677758,129690546,129709233,129710571,129711576,129717376,129727365,129756015 Gene ID= ENSG00000106459.14 TPM= 2.72 Transcript Type= protein_coding chr7 129830732 129952949 129830732 129952949 - ENST00000355621.7@UBE2H ENST00000355621.7 protein_coding 129952503,129880895,129879568,129858902,129857511,129839207,129830732 129952949,129880971,129879642,129858941,129857563,129839335,129835061 Gene ID= ENSG00000186591.11 TPM= 398.44 Transcript Type= protein_coding chr7 130018286 130051451 130018286 130051451 - ENST00000358303.8@ZC3HC1 ENST00000358303.8 protein_coding 130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018286 130051451,130049144,130041101,130039547,130029029,130026312,130024506,130023723,130022525,130018732 Gene ID= ENSG00000091732.15 TPM= 64.29 Transcript Type= protein_coding chr7 130018326 130051389 130018326 130051389 - ENST00000481503.5@ZC3HC1 ENST00000481503.5 protein_coding 130051221,130049033,130040951,130039464,130028902,130026158,130024263,130023511,130022319,130018326 130051389,130049144,130041101,130039547,130029029,130026312,130024377,130023723,130022525,130018732 Gene ID= ENSG00000091732.15 TPM= 2.72 Transcript Type= protein_coding chr7 130070510 130135720 130070510 130135720 + ENST00000335420.9@KLHDC10 ENST00000335420.9 protein_coding 130070510,130096921,130116445,130120749,130122054,130124451,130125865,130127404,130129437,130130537 130070809,130097007,130116666,130120903,130122202,130124535,130125931,130127451,130129576,130135720 Gene ID= ENSG00000128607.13 TPM= 12.68 Transcript Type= protein_coding chr7 130164715 130205498 130164715 130205498 - ENST00000397622.6@TMEM209 ENST00000397622.6 protein_coding 130205373,130203974,130203788,130202532,130201850,130192622,130185192,130184184,130181623,130178402,130175512,130173825,130173632,130170400,130164715 130205498,130204110,130203846,130202663,130202091,130192823,130185367,130184255,130181719,130178527,130175609,130173939,130173729,130170473,130166505 Gene ID= ENSG00000146842.16 TPM= 19.02 Transcript Type= protein_coding chr7 130191042 130205430 130191042 130205430 - transcript3818.chr7.nic@TMEM209 transcript3818.chr7.nic protein_coding 130205373,130203974,130203788,130202532,130201850,130191042 130205430,130204110,130203846,130202663,130202091,130192823 Gene ID= ENSG00000146842.16 TPM= 1.81 Transcript Type= NA chr7 130200311 130205430 130200311 130205430 - transcript3820.chr7.nic@TMEM209 transcript3820.chr7.nic protein_coding 130205373,130203974,130203788,130202532,130200311 130205430,130204110,130203846,130202663,130202091 Gene ID= ENSG00000146842.16 TPM= 2.72 Transcript Type= NA chr7 130293153 130324179 130293153 130324179 + ENST00000222482.8@CPA4 ENST00000222482.8 protein_coding 130293153,130298746,130299270,130300816,130304478,130305816,130306787,130308307,130310787,130312038,130322489 130293248,130298827,130299404,130300914,130304579,130305920,130306897,130308397,130310986,130312122,130324179 Gene ID= ENSG00000128510.10 TPM= 2.72 Transcript Type= protein_coding chr7 130486171 130506292 130486171 130506292 + ENST00000341441.9@MEST ENST00000341441.9 protein_coding 130486171,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130500789,130502644,130503933,130504939 130486395,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130500890,130502720,130503996,130506292 Gene ID= ENSG00000106484.14 TPM= 49.27 Transcript Type= protein_coding chr7 130492093 130506292 130492093 130506292 + ENST00000223215.8@MEST ENST00000223215.8 protein_coding 130492093,130495368,130497156,130497936,130498139,130498419,130499875,130500462,130500789,130502644,130503933,130504939 130492339,130495522,130497235,130498013,130498275,130498477,130499915,130500532,130500890,130502720,130503996,130506292 Gene ID= ENSG00000106484.14 TPM= 255.74 Transcript Type= protein_coding chr7 130506238 130668748 130506238 130668748 - ENST00000425248.5@COPG2 ENST00000425248.5 protein_coding 130668632,130667482,130666849,130662967,130652869,130616990,130613544,130612152,130610953,130564260,130563269,130561033,130555037,130554481,130552355,130551241,130550524,130549314,130548403,130547674,130508562,130507685,130507274,130506238 130668748,130667534,130666929,130663038,130652948,130617065,130613636,130612238,130611110,130564393,130563336,130561221,130555132,130554724,130552430,130551344,130550649,130549376,130548542,130547845,130508659,130507823,130507372,130506806 Gene ID= ENSG00000158623.14 TPM= 31.69 Transcript Type= protein_coding chr7 130944162 131110069 130944162 131110069 - transcript3861.chr7.nic@LINC-PINT transcript3861.chr7.nic antisense_RNA 131109737,131107720,131052425,130984053,130944162 131110069,131108803,131052555,130984109,130945835 Gene ID= ENSG00000231721.6 TPM= 11.77 Transcript Type= NA chr7 131327897 131487962 131327897 131487962 + ENST00000458153.5@MKLN1 ENST00000458153.5 protein_coding 131327897,131375424,131387120,131388884,131397267,131399238,131411306,131414645,131429033,131437785,131443481,131445774,131463217,131464294,131466276,131470842,131478623,131487607 131327997,131375493,131387262,131388972,131397376,131399433,131411383,131414710,131429145,131437997,131443702,131445903,131463364,131464408,131466415,131470944,131478677,131487962 Gene ID= ENSG00000128585.17 TPM= 9.06 Transcript Type= nonsense_mediated_decay chr7 132784863 132933149 132784863 132933149 - transcript3872.chr7.nnic@CHCHD3 transcript3872.chr7.nnic protein_coding 132933040,132885662,132838399,132796442,132784863 132933149,132885745,132838469,132796577,132785660 Gene ID= ENSG00000106554.12 TPM= 3.62 Transcript Type= NA chr7 132972912 133082107 132972912 133082107 - transcript3873.chr7.nic@CHCHD3 transcript3873.chr7.nic protein_coding 133081857,133070142,133024546,132975169,132972912 133082107,133070229,133024627,132975286,132974024 Gene ID= ENSG00000106554.12 TPM= 2.72 Transcript Type= NA chr7 132784868 133082082 132784868 133082082 - ENST00000262570.9@CHCHD3 ENST00000262570.9 protein_coding 133081857,133070142,133024546,132975169,132885662,132838399,132796442,132784868 133082082,133070229,133024627,132975286,132885745,132838469,132796577,132785660 Gene ID= ENSG00000106554.12 TPM= 90.55 Transcript Type= protein_coding chr7 133253064 133376321 133253064 133376321 + transcript3877.chr7.nnic@EXOC4 transcript3877.chr7.nnic protein_coding 133253064,133274982,133288922,133305877,133317284,133356330,133374828,133375195 133253187,133275171,133289116,133306061,133317390,133356573,133375002,133376321 Gene ID= ENSG00000131558.14 TPM= 1.81 Transcript Type= NA chr7 133253073 134065759 133253073 134065759 + ENST00000253861.4@EXOC4 ENST00000253861.4 protein_coding 133253073,133274982,133288922,133305877,133317284,133356330,133374828,133475328,133480050,133630045,133817325,133895599,133917583,133937891,133997492,134004912,134007676,134064291 133253187,133275171,133289116,133306061,133317390,133356573,133375002,133475473,133480138,133630141,133817544,133895735,133917738,133938069,133997633,134005090,134007835,134065759 Gene ID= ENSG00000131558.14 TPM= 61.58 Transcript Type= protein_coding chr7 134289332 134317051 134289332 134317051 - ENST00000378509.8@SLC35B4 ENST00000378509.8 protein_coding 134316675,134309366,134306672,134304805,134302029,134301761,134300152,134299523,134296391,134289332 134317051,134309479,134306774,134304854,134302110,134301821,134300261,134299598,134296466,134295079 Gene ID= ENSG00000205060.10 TPM= 22.64 Transcript Type= protein_coding chr7 134442350 134459142 134442350 134459142 - ENST00000285930.8@AKR1B1 ENST00000285930.8 protein_coding 134458997,134451586,134450786,134449720,134448997,134448387,134447980,134447298,134445238,134442350 134459142,134451753,134450902,134449797,134449119,134448493,134448061,134447381,134445320,134442770 Gene ID= ENSG00000085662.13 TPM= 5991.77 Transcript Type= protein_coding chr7 134442387 134459102 134442387 134459102 - ENST00000465351.5@AKR1B1 ENST00000465351.5 protein_coding 134458997,134451586,134450786,134449720,134448997,134448387,134447298,134445238,134442387 134459102,134451753,134450902,134449797,134449119,134448493,134448061,134445320,134442770 Gene ID= ENSG00000085662.13 TPM= 80.82 Transcript Type= retained_intron chr7 134442386 134459102 134442386 134459102 - ENST00000434222.5@AKR1B1 ENST00000434222.5 protein_coding 134458997,134451586,134450786,134449720,134448997,134448387,134447461,134447298,134445238,134442386 134459102,134451753,134450902,134449797,134449119,134448493,134448061,134447381,134445320,134442770 Gene ID= ENSG00000085662.13 TPM= 3.85 Transcript Type= nonsense_mediated_decay chr7 134527592 134541408 134527592 134541408 + ENST00000359579.4@AKR1B10 ENST00000359579.4 protein_coding 134527592,134530643,134531908,134533004,134536650,134537051,134537580,134538194,134538935,134541047 134527977,134530810,134532024,134533081,134536772,134537157,134537661,134538277,134539017,134541408 Gene ID= ENSG00000198074.9 TPM= 3.62 Transcript Type= protein_coding chr7 134646808 134679813 134646808 134679813 + ENST00000344924.7@BPGM ENST00000344924.7 protein_coding 134646808,134661447,134678853 134646937,134662108,134679813 Gene ID= ENSG00000172331.11 TPM= 24.45 Transcript Type= protein_coding chr7 134745444 134970637 134745444 134970637 + transcript3908.chr7.nic@CALD1 transcript3908.chr7.nic protein_coding 134745444,134843884,134867693,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340 134745572,134843971,134867804,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970637 Gene ID= ENSG00000122786.19 TPM= 15.39 Transcript Type= NA chr7 134779420 134970728 134779420 134970728 + transcript3911.chr7.nic@CALD1 transcript3911.chr7.nic protein_coding 134779420,134843884,134867693,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968554 134779749,134843971,134867804,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970728 Gene ID= ENSG00000122786.19 TPM= 10.87 Transcript Type= NA chr7 134891440 134970637 134891440 134970637 + transcript3916.chr7.nic@CALD1 transcript3916.chr7.nic protein_coding 134891440,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968554 134891673,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970637 Gene ID= ENSG00000122786.19 TPM= 5.43 Transcript Type= NA chr7 134779678 134970641 134779678 134970641 + ENST00000361901.6@CALD1 ENST00000361901.6 protein_coding 134779678,134843884,134867693,134928754,134932988,134941092,134947508,134950374,134958069,134958209,134959974,134960533,134965306,134968340 134779749,134843971,134867804,134928900,134933390,134941237,134947769,134950514,134958112,134958290,134960111,134960628,134965386,134970641 Gene ID= ENSG00000122786.19 TPM= 50.71 Transcript Type= protein_coding chr7 135162466 135170912 135162466 135170912 - transcript3926.chr7.nic@C7orf49 transcript3926.chr7.nic protein_coding 135170652,135168749,135167732,135162466 135170912,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 24 Transcript Type= NA chr7 135162466 135170481 135162466 135170481 - transcript3927.chr7.nic@C7orf49 transcript3927.chr7.nic protein_coding 135170276,135168786,135167732,135162466 135170481,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 2.42 Transcript Type= NA chr7 135162466 135170745 135162466 135170745 - transcript3928.chr7.nic@C7orf49 transcript3928.chr7.nic protein_coding 135170399,135168786,135167732,135162466 135170745,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 6.49 Transcript Type= NA chr7 135165782 135170524 135165782 135170524 - ENST00000617987.1@C7orf49 ENST00000617987.1 protein_coding 135170276,135168749,135167732,135165782 135170524,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 2.72 Transcript Type= protein_coding chr7 135165829 135170795 135165829 135170795 - ENST00000430372.1@C7orf49 ENST00000430372.1 protein_coding 135170652,135168745,135167732,135165829 135170795,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 20.67 Transcript Type= protein_coding chr7 135165785 135170661 135165785 135170661 - ENST00000424142.5@C7orf49 ENST00000424142.5 protein_coding 135170399,135168749,135167732,135165785 135170661,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 18.56 Transcript Type= protein_coding chr7 135165785 135170695 135165785 135170695 - ENST00000393114.7@C7orf49 ENST00000393114.7 protein_coding 135170652,135168786,135167732,135165785 135170695,135169060,135167807,135166871 Gene ID= ENSG00000122783.16 TPM= 3.92 Transcript Type= protein_coding chr7 135148072 135166215 135148072 135166215 + ENST00000275767.3@TMEM140 ENST00000275767.3 protein_coding 135148072,135164418 135148270,135166215 Gene ID= ENSG00000146859.6 TPM= 76.07 Transcript Type= protein_coding chr7 135185220 135211555 135185220 135211555 - transcript3936.chr7.nnic@WDR91 transcript3936.chr7.nnic protein_coding 135211380,135209576,135208791,135207120,135205928,135204268,135197993,135197044,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135185220 135211555,135209755,135208998,135207202,135206058,135204393,135198151,135197147,135196337,135195084,135193672,135193346,135189452,135188545,135187169,135186315 Gene ID= ENSG00000105875.13 TPM= 2.04 Transcript Type= NA chr7 135185242 135211555 135185242 135211555 - transcript3939.chr7.nic@WDR91 transcript3939.chr7.nic protein_coding 135211380,135209576,135208791,135207120,135205928,135204268,135197993,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135185242 135211555,135209755,135208998,135207202,135206058,135204465,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315 Gene ID= ENSG00000105875.13 TPM= 2.04 Transcript Type= NA chr7 135183839 135211534 135183839 135211534 - ENST00000354475.4@WDR91 ENST00000354475.4 protein_coding 135211380,135209576,135208791,135207120,135205928,135204268,135197993,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135183839 135211534,135209755,135208998,135207202,135206058,135204433,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315 Gene ID= ENSG00000105875.13 TPM= 21.05 Transcript Type= protein_coding chr7 135185782 135211534 135185782 135211534 - ENST00000466182.5@WDR91 ENST00000466182.5 protein_coding 135211380,135209576,135208791,135207120,135205928,135204268,135197044,135196144,135194934,135193578,135193231,135189344,135188433,135186972,135185782 135211534,135209755,135208998,135207202,135206058,135204433,135198151,135196337,135195084,135193672,135193399,135189452,135188545,135187169,135186315 Gene ID= ENSG00000105875.13 TPM= 2.04 Transcript Type= retained_intron chr7 135557919 135648757 135557919 135648757 + ENST00000285968.10@NUP205 ENST00000285968.10 protein_coding 135557919,135571105,135573654,135576270,135576969,135577796,135578751,135584832,135587575,135587855,135591450,135592987,135594547,135597368,135597998,135600870,135601370,135602805,135604340,135606145,135606751,135607247,135614159,135615916,135616655,135617090,135617602,135618412,135619423,135619790,135622777,135625164,135626240,135627973,135630344,135635581,135637931,135638557,135643192,135644895,135645468,135646158,135648404 135557972,135571247,135573825,135576414,135577128,135578024,135578915,135585007,135587691,135587992,135591600,135593192,135594729,135597418,135598207,135600969,135601507,135602994,135604460,135606226,135606915,135607371,135614273,135616065,135616726,135617247,135617682,135618603,135619690,135619888,135622925,135625355,135626361,135628111,135630470,135635657,135638059,135638683,135643358,135645018,135645596,135646231,135648757 Gene ID= ENSG00000155561.14 TPM= 13.58 Transcript Type= protein_coding chr7 135662521 135676412 135662521 135676412 + ENST00000507606.2@C7orf73 ENST00000507606.2 protein_coding 135662521,135672753,135674091 135662594,135672806,135676412 Gene ID= ENSG00000243317.7 TPM= 115.91 Transcript Type= protein_coding chr7 135926761 135977316 135926761 135977316 - ENST00000393085.3@MTPN ENST00000393085.3 protein_coding 135977029,135951517,135950599,135926761 135977316,135951630,135950682,135930012 Gene ID= ENSG00000105887.10 TPM= 9.96 Transcript Type= protein_coding chr7 138460334 138589993 138460334 138589993 + ENST00000343526.8@TRIM24 ENST00000343526.8 protein_coding 138460334,138504290,138515212,138519189,138525241,138529116,138538657,138551063,138554698,138567481,138570830,138573507,138576373,138577420,138579204,138580562,138581697,138583850,138584742 138460912,138504408,138515359,138519321,138525357,138529230,138538803,138551180,138554966,138567654,138571003,138573642,138576445,138577588,138579532,138580694,138581771,138583999,138589993 Gene ID= ENSG00000122779.17 TPM= 31.24 Transcript Type= protein_coding chr7 138460435 138585585 138460435 138585585 + ENST00000415680.6@TRIM24 ENST00000415680.6 protein_coding 138460435,138504290,138515212,138519189,138525241,138529116,138538657,138551063,138554698,138567481,138570830,138573507,138576373,138577420,138579204,138580562,138581697,138583850,138584742 138460912,138504408,138515359,138519321,138525357,138529230,138538803,138551180,138554864,138567654,138571003,138573642,138576445,138577588,138579532,138580694,138581771,138583999,138585585 Gene ID= ENSG00000122779.17 TPM= 8.6 Transcript Type= protein_coding chr7 139060342 139109760 139060342 139109760 - transcript3975.chr7.nic@ZC3HAV1 transcript3975.chr7.nic protein_coding 139109024,139089624,139083780,139079104,139078552,139076286,139073856,139064879,139060342 139109760,139089759,139084032,139080243,139078653,139076409,139074030,139064999,139061138 Gene ID= ENSG00000105939.12 TPM= 2.72 Transcript Type= NA chr7 139045916 139109354 139045916 139109354 - ENST00000464606.5@ZC3HAV1 ENST00000464606.5 protein_coding 139109024,139089624,139083780,139079104,139078552,139076286,139073856,139064879,139061036,139055205,139053965,139053451,139045916 139109354,139089759,139084032,139080243,139078653,139076409,139074030,139064999,139061138,139055295,139054095,139053581,139047853 Gene ID= ENSG00000105939.12 TPM= 3.62 Transcript Type= protein_coding chr7 139060338 139109719 139060338 139109719 - ENST00000471652.1@ZC3HAV1 ENST00000471652.1 protein_coding 139109024,139089624,139083780,139079470,139078552,139076286,139073856,139064879,139060338 139109719,139089759,139084032,139080243,139078653,139076409,139074030,139064999,139061138 Gene ID= ENSG00000105939.12 TPM= 14.49 Transcript Type= protein_coding chr7 139133778 139191986 139133778 139191986 + ENST00000464848.5@TTC26 ENST00000464848.5 protein_coding 139133778,139134655,139137847,139139890,139142256,139147145,139148206,139160948,139165132,139166840,139168344,139169289,139178214,139178515,139179574,139181092,139187406,139189321 139133860,139134792,139137939,139140004,139142305,139147290,139148377,139161022,139165234,139166895,139168397,139169352,139178302,139178598,139179643,139181198,139187539,139191986 Gene ID= ENSG00000105948.13 TPM= 20.83 Transcript Type= protein_coding chr7 139340450 139345790 139340450 139345790 + ENST00000481123.1@FMC1 ENST00000481123.1 protein_coding 139340450,139345501 139340619,139345790 Gene ID= ENSG00000164898.12 TPM= 1.81 Transcript Type= processed_transcript chr7 139359878 139423452 139359878 139423452 + transcript4005.chr7.nic@LUC7L2 transcript4005.chr7.nic protein_coding 139359878,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538 139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139423452 Gene ID= ENSG00000146963.17 TPM= 25.36 Transcript Type= NA chr7 139359908 139423452 139359908 139423452 + ENST00000354926.8@LUC7L2 ENST00000354926.8 protein_coding 139359908,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163 139360322,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423452 Gene ID= ENSG00000146963.17 TPM= 120.08 Transcript Type= protein_coding chr7 139359882 139423461 139359882 139423461 + transcript3993.chr7.nnic@C7orf55-LUC7L2 transcript3993.chr7.nnic protein_coding 139359882,139363176,139376062,139398599,139402137,139405644,139407174,139409563,139412551,139417538,139422163 139360322,139363259,139376156,139398697,139402247,139405787,139407350,139409654,139412580,139417729,139423461 Gene ID= ENSG00000269955.2 TPM= 11.41 Transcript Type= NA chr7 139829270 139963042 139829270 139963042 + transcript4016.chr7.nic@TBXAS1 transcript4016.chr7.nic protein_coding 139829270,139872235,139875585,139911225,139936191,139953368,139955459,139957634,139961919 139829479,139872328,139875637,139911321,139936307,139953456,139955607,139957764,139963042 Gene ID= ENSG00000059377.16 TPM= 1.81 Transcript Type= NA chr7 139829224 140020293 139829224 140020293 + ENST00000448866.5@TBXAS1 ENST00000448866.5 protein_coding 139829224,139872235,139875585,139911225,139936191,139953368,139955459,139957634,139961919,140007091,140015723,140017671,140020025 139829479,139872328,139875637,139911321,139936307,139953456,139955607,139957764,139962233,140007182,140015860,140017833,140020293 Gene ID= ENSG00000059377.16 TPM= 28.07 Transcript Type= protein_coding chr7 139829264 140020325 139829264 140020325 + ENST00000411653.5@TBXAS1 ENST00000411653.5 protein_coding 139829264,139872235,139875585,139911225,139936191,139953368,139955459,139957634,139961919,140007091,140015723,140020025 139829479,139872328,139875637,139911321,139936307,139953456,139955607,139957764,139962233,140007182,140015860,140020325 Gene ID= ENSG00000059377.16 TPM= 5.43 Transcript Type= protein_coding chr7 140023744 140063721 140023744 140063721 - ENST00000263549.7@PARP12 ENST00000263549.7 protein_coding 140062522,140057899,140056856,140054662,140046884,140041644,140037715,140034235,140028613,140027276,140026197,140023744 140063721,140058034,140057153,140054763,140047007,140041839,140037856,140034331,140028688,140027406,140026348,140024885 Gene ID= ENSG00000059378.12 TPM= 47.09 Transcript Type= protein_coding chr7 140333752 140398549 140333752 140398549 - ENST00000326232.13@SLC37A3 ENST00000326232.13 protein_coding 140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333752 140398549,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504 Gene ID= ENSG00000157800.17 TPM= 30.79 Transcript Type= protein_coding chr7 140333754 140398549 140333754 140398549 - transcript4027.chr7.nic@SLC37A3 transcript4027.chr7.nic protein_coding 140398416,140382438,140380282,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333754 140398549,140382596,140380390,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335439 Gene ID= ENSG00000157800.17 TPM= 2.72 Transcript Type= NA chr7 140333753 140398549 140333753 140398549 - transcript4028.chr7.nic@SLC37A3 transcript4028.chr7.nic protein_coding 140398416,140382438,140369590,140364408,140358640,140355668,140352062,140351273,140348626,140345869,140345216,140343412,140337284,140333753 140398549,140382596,140369682,140364491,140358785,140355764,140352146,140351451,140348767,140345970,140345263,140343563,140337349,140335504 Gene ID= ENSG00000157800.17 TPM= 1.81 Transcript Type= NA chr7 140453035 140479381 140453035 140479381 - transcript4043.chr7.nic@MKRN1 transcript4043.chr7.nic protein_coding 140479160,140471883,140459707,140459007,140456652,140455857,140455095,140453035 140479381,140472011,140459936,140459233,140456866,140455900,140455233,140454729 Gene ID= ENSG00000133606.10 TPM= 5.43 Transcript Type= NA chr7 140453040 140479569 140453040 140479569 - ENST00000255977.6@MKRN1 ENST00000255977.6 protein_coding 140479160,140471883,140459707,140459007,140456652,140455790,140455095,140453040 140479569,140472011,140459936,140459233,140456866,140455900,140455233,140454729 Gene ID= ENSG00000133606.10 TPM= 145.79 Transcript Type= protein_coding chr7 140456192 140479499 140456192 140479499 - ENST00000443720.6@MKRN1 ENST00000443720.6 protein_coding 140479160,140471883,140459707,140459007,140456192 140479499,140472011,140459936,140459233,140456866 Gene ID= ENSG00000133606.10 TPM= 13.58 Transcript Type= protein_coding chr7 140518420 140640776 140518420 140640776 - ENST00000275884.10@DENND2A ENST00000275884.10 protein_coding 140640504,140601403,140587653,140585589,140573808,140569645,140568763,140567086,140559708,140558143,140555636,140546799,140544618,140527318,140525751,140523307,140521855,140519632,140518420 140640776,140602542,140587780,140585710,140574008,140569738,140568813,140567273,140559817,140558212,140555713,140546939,140544766,140527495,140525792,140523424,140522100,140519718,140518738 Gene ID= ENSG00000146966.12 TPM= 10.87 Transcript Type= protein_coding chr7 140673153 140695121 140673153 140695121 + ENST00000072869.8@ADCK2 ENST00000072869.8 protein_coding 140673153,140674611,140679155,140681042,140686990,140689597,140690760,140694663 140674263,140674757,140679283,140681137,140687241,140689725,140690813,140695121 Gene ID= ENSG00000133597.10 TPM= 5.43 Transcript Type= protein_coding chr7 140696672 140706646 140696672 140706646 + ENST00000247866.8@NDUFB2 ENST00000247866.8 protein_coding 140696672,140702866,140704860,140706563 140696842,140703010,140704963,140706646 Gene ID= ENSG00000090266.12 TPM= 207.67 Transcript Type= protein_coding chr7 140696988 140706646 140696988 140706646 + ENST00000460088.5@NDUFB2 ENST00000460088.5 protein_coding 140696988,140702866,140704860,140706563 140697074,140703010,140704963,140706646 Gene ID= ENSG00000090266.12 TPM= 1.2 Transcript Type= protein_coding chr7 140697224 140706644 140697224 140706644 + ENST00000471136.5@NDUFB2 ENST00000471136.5 protein_coding 140697224,140702866,140704860,140706563 140697391,140703010,140704963,140706644 Gene ID= ENSG00000090266.12 TPM= 5.73 Transcript Type= protein_coding chr7 140734479 140924764 140734479 140924764 - ENST00000288602.10@BRAF ENST00000288602.10 protein_coding 140924566,140850111,140834609,140808892,140807960,140801412,140800362,140794308,140787548,140783021,140781576,140777991,140776912,140754187,140753275,140749287,140739812,140734479 140924764,140850212,140834872,140808995,140808062,140801560,140800481,140794467,140787584,140783157,140781693,140778075,140777088,140754233,140753393,140749418,140739946,140734770 Gene ID= ENSG00000157764.12 TPM= 2.72 Transcript Type= protein_coding chr7 141006162 141014688 141006162 141014688 - transcript4075.chr7.nnic@MRPS33 transcript4075.chr7.nnic protein_coding 141014551,141010419,141006162 141014688,141010617,141006535 Gene ID= ENSG00000090263.15 TPM= 2.26 Transcript Type= NA chr7 141006169 141014966 141006169 141014966 - ENST00000467334.1@MRPS33 ENST00000467334.1 protein_coding 141014911,141010419,141006169 141014966,141010617,141006535 Gene ID= ENSG00000090263.15 TPM= 9.51 Transcript Type= protein_coding chr7 141551189 141655244 141551189 141655244 + ENST00000355413.8@AGK ENST00000355413.8 protein_coding 141551189,141555453,141593146,141596562,141601205,141611195,141614146,141615471,141621732,141633901,141636960,141641248,141641811,141649263,141651525,141652787 141551434,141555567,141593185,141596641,141601280,141611287,141614178,141615565,141621801,141633980,141637017,141641398,141641908,141649333,141651609,141655244 Gene ID= ENSG00000006530.15 TPM= 22.19 Transcript Type= protein_coding chr7 141551430 141654261 141551430 141654261 + transcript4081.chr7.nnic@AGK transcript4081.chr7.nnic protein_coding 141551430,141555453,141593146,141596562,141601205,141611195,141614146,141615471,141621732,141633901,141636960,141641248,141641811,141649263,141651525,141652787 141551618,141555567,141593185,141596641,141601280,141611287,141614178,141615565,141621801,141633980,141637017,141641398,141641908,141649333,141651609,141654261 Gene ID= ENSG00000006530.15 TPM= 8.6 Transcript Type= NA chr7 141656728 141702153 141656728 141702153 - ENST00000536163.5@KIAA1147 ENST00000536163.5 protein_coding 141701886,141686559,141685478,141674067,141666287,141665187,141664904,141664172,141656728 141702153,141686658,141685636,141674220,141666425,141665318,141665054,141664240,141662851 Gene ID= ENSG00000257093.6 TPM= 12.68 Transcript Type= protein_coding chr7 141738321 141750461 141738321 141750461 + ENST00000265304.10@SSBP1 ENST00000265304.10 protein_coding 141738321,141739124,141742169,141743561,141743902,141745496,141750311 141738410,141739190,141742229,141743701,141743989,141745584,141750461 Gene ID= ENSG00000106028.10 TPM= 57.05 Transcript Type= protein_coding chr7 141738334 141750488 141738334 141750488 + ENST00000612337.4@SSBP1 ENST00000612337.4 protein_coding 141738334,141739124,141742169,141743561,141743902,141745496,141750311 141738593,141739190,141742229,141743701,141743989,141745584,141750488 Gene ID= ENSG00000106028.10 TPM= 7.24 Transcript Type= protein_coding chr7 142855061 142871094 142855061 142871094 + ENST00000619012.4@EPHB6 ENST00000619012.4 protein_coding 142855061,142861052,142862017,142862756,142863131,142863631,142863966,142865475,142865960,142866481,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796 142855385,142861186,142862133,142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871094 Gene ID= ENSG00000106123.11 TPM= 7.24 Transcript Type= protein_coding chr7 142855067 142871092 142855067 142871092 + transcript4099.chr7.nnic@EPHB6 transcript4099.chr7.nnic protein_coding 142855067,142861052,142862017,142862756,142863127,142863631,142863966,142865475,142865960,142866481,142866999,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796 142855385,142861186,142862133,142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871092 Gene ID= ENSG00000106123.11 TPM= 1.81 Transcript Type= NA chr7 142855067 142871092 142855067 142871092 + transcript4100.chr7.nnic@EPHB6 transcript4100.chr7.nnic protein_coding 142855067,142861052,142862756,142863127,142863631,142863966,142865475,142865960,142866481,142866906,142867608,142867997,142868241,142868492,142868974,142869817,142870214,142870530,142870796 142855385,142861186,142862833,142863327,142863695,142864749,142865630,142866316,142866605,142867068,142867722,142868049,142868360,142868739,142869147,142869966,142870407,142870685,142871092 Gene ID= ENSG00000106123.11 TPM= 2.72 Transcript Type= NA chr7 143263419 143272489 143263419 143272489 + transcript4115.chr7.nic@GSTK1 transcript4115.chr7.nic protein_coding 143263419,143264086,143265261,143267617,143268091,143268788 143263585,143265092,143265296,143267733,143268184,143272489 Gene ID= ENSG00000197448.13 TPM= 5.73 Transcript Type= NA chr7 143263443 143269129 143263443 143269129 + ENST00000358406.9@GSTK1 ENST00000358406.9 protein_coding 143263443,143264086,143264548,143264992,143265261,143267617,143268091,143268788 143263585,143264167,143264676,143265092,143265296,143267733,143268184,143269129 Gene ID= ENSG00000197448.13 TPM= 231.21 Transcript Type= protein_coding chr7 143263456 143269115 143263456 143269115 + ENST00000479303.1@GSTK1 ENST00000479303.1 protein_coding 143263456,143264086,143264548,143264992,143267617,143268091,143268788 143263585,143264167,143264676,143265296,143267733,143268184,143269115 Gene ID= ENSG00000197448.13 TPM= 24.75 Transcript Type= protein_coding chr7 143279937 143288047 143279937 143288047 + transcript4117.chr7.nnic@TMEM139 transcript4117.chr7.nnic protein_coding 143279937,143284552,143285348,143285941,143286424 143280047,143284626,143285445,143286202,143288047 Gene ID= ENSG00000178826.10 TPM= 2.72 Transcript Type= NA chr7 143279957 143287296 143279957 143287296 + ENST00000409102.5@TMEM139 ENST00000409102.5 protein_coding 143279957,143285941,143286424 143280047,143286202,143287296 Gene ID= ENSG00000178826.10 TPM= 1.81 Transcript Type= protein_coding chr7 143288215 143307696 143288215 143307696 + ENST00000310447.9@CASP2 ENST00000310447.9 protein_coding 143288215,143291540,143292300,143292617,143294230,143294597,143299923,143300204,143303784,143304674,143304940 143288529,143291690,143292467,143292698,143294324,143294773,143300051,143300294,143303933,143304783,143307696 Gene ID= ENSG00000106144.19 TPM= 7.24 Transcript Type= protein_coding chr7 143290078 143297425 143290078 143297425 + transcript4126.chr7.nnic@CASP2 transcript4126.chr7.nnic protein_coding 143290078,143292300,143292615,143294228,143294597 143291690,143292467,143292698,143294324,143297425 Gene ID= ENSG00000106144.19 TPM= 1.81 Transcript Type= NA chr7 143381080 143391111 143381080 143391111 + ENST00000322764.9@ZYX ENST00000322764.9 protein_coding 143381080,143381557,143382248,143382593,143382801,143388219,143388489,143388767,143389857,143390578 143381409,143381779,143382447,143382685,143383322,143388339,143388658,143388945,143389977,143391111 Gene ID= ENSG00000159840.15 TPM= 204.65 Transcript Type= protein_coding chr7 143620955 143730089 143620955 143730089 + transcript4132.chr7.nic@TCAF2 transcript4132.chr7.nic protein_coding 143620955,143702981,143719683,143721281,143722658,143723211,143724360,143727413 143621020,143703617,143720674,143721378,143722871,143723450,143724697,143730089 Gene ID= ENSG00000170379.19 TPM= 2.72 Transcript Type= NA chr7 143620974 143730089 143620974 143730089 + transcript4135.chr7.nic@TCAF2 transcript4135.chr7.nic protein_coding 143620974,143719683,143721281,143722658,143723211,143724360,143727413 143621020,143720674,143721378,143722871,143723450,143724697,143730089 Gene ID= ENSG00000170379.19 TPM= 3.62 Transcript Type= NA chr7 143811968 143836933 143811968 143836933 - ENST00000481651.1@AC099548.2 ENST00000481651.1 transcribed_unprocessed_pseudogene 143836640,143811968 143836933,143813779 Gene ID= ENSG00000253882.6 TPM= 9.51 Transcript Type= processed_transcript chr7 143811969 143836708 143811969 143836708 - ENST00000494978.5@AC099548.2 ENST00000494978.5 transcribed_unprocessed_pseudogene 143836640,143833247,143811969 143836708,143833883,143813779 Gene ID= ENSG00000253882.6 TPM= 6.79 Transcript Type= processed_transcript chr7 143851350 143882867 143851350 143882867 - transcript4147.chr7.nic@TCAF1 transcript4147.chr7.nic protein_coding 143882736,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851350 143882867,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142 Gene ID= ENSG00000198420.9 TPM= 5.98 Transcript Type= NA chr7 143851350 143902176 143851350 143902176 - transcript4150.chr7.nic@TCAF1 transcript4150.chr7.nic protein_coding 143902027,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851350 143902176,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142 Gene ID= ENSG00000198420.9 TPM= 19.56 Transcript Type= NA chr7 143851350 143902185 143851350 143902185 - transcript4151.chr7.nic@TCAF1 transcript4151.chr7.nic protein_coding 143902074,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851350 143902185,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142 Gene ID= ENSG00000198420.9 TPM= 4.17 Transcript Type= NA chr7 143851364 143902223 143851364 143902223 - transcript4156.chr7.nic@TCAF1 transcript4156.chr7.nic protein_coding 143901961,143875989,143862802,143862416,143861095,143860208,143858824,143857074,143851364 143902223,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142 Gene ID= ENSG00000198420.9 TPM= 9.6 Transcript Type= NA chr7 143851375 143902155 143851375 143902155 - ENST00000479870.5@TCAF1 ENST00000479870.5 protein_coding 143901961,143875989,143862802,143862416,143861095,143860208,143858824,143857100,143851375 143902155,143876622,143863796,143862513,143861308,143860447,143859161,143857350,143854142 Gene ID= ENSG00000198420.9 TPM= 93.81 Transcript Type= protein_coding chr7 144186083 144195655 144186083 144195655 - ENST00000378115.2@ARHGEF35 ENST00000378115.2 protein_coding 144195538,144186083 144195655,144188395 Gene ID= ENSG00000213214.4 TPM= 5.43 Transcript Type= protein_coding chr7 144355317 144381402 144355317 144381402 + transcript4163.chr7.nic@ARHGEF5 transcript4163.chr7.nic protein_coding 144355317,144362658,144366355,144366846,144367102,144371161,144371877,144372299,144372683,144373195,144374732,144375514,144377120,144378762,144379899 144355501,144362853,144366412,144366910,144367355,144371321,144372029,144372428,144372757,144373284,144374889,144375675,144377190,144378866,144381402 Gene ID= ENSG00000050327.14 TPM= 3.62 Transcript Type= NA chr7 144355340 144380632 144355340 144380632 + ENST00000056217.9@ARHGEF5 ENST00000056217.9 protein_coding 144355340,144362658,144366355,144366846,144367102,144371161,144371877,144372299,144372683,144373195,144374732,144375514,144377120,144378762,144379899 144355501,144365823,144366412,144366910,144367355,144371321,144372029,144372428,144372757,144373284,144374889,144375675,144377190,144378866,144380632 Gene ID= ENSG00000050327.14 TPM= 4.53 Transcript Type= protein_coding chr7 144451941 144836053 144451941 144836053 - ENST00000360057.7@TPK1 ENST00000360057.7 protein_coding 144835967,144835560,144765880,144682909,144648807,144623166,144591423,144548491,144451941 144836053,144835618,144765951,144682978,144648879,144623261,144591569,144548602,144453663 Gene ID= ENSG00000196511.14 TPM= 3.62 Transcript Type= protein_coding chr7 144451950 144836053 144451950 144836053 - ENST00000378099.7@TPK1 ENST00000378099.7 protein_coding 144835967,144835560,144765880,144682909,144648807,144623166,144548491,144451950 144836053,144835618,144765951,144682978,144648879,144623261,144548602,144453663 Gene ID= ENSG00000196511.14 TPM= 1.81 Transcript Type= protein_coding chr7 148698886 148803157 148698886 148803157 + transcript4188.chr7.nnic@CUL1 transcript4188.chr7.nnic protein_coding 148698886,148729962,148753976,148756983,148759304,148759548,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502 148699029,148730262,148754150,148757150,148759354,148759638,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148803157 Gene ID= ENSG00000055130.15 TPM= 4.53 Transcript Type= NA chr7 148698645 148801025 148698645 148801025 + ENST00000602748.5@CUL1 ENST00000602748.5 protein_coding 148698645,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502 148698763,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801025 Gene ID= ENSG00000055130.15 TPM= 4.07 Transcript Type= protein_coding chr7 148698912 148801036 148698912 148801036 + ENST00000325222.8@CUL1 ENST00000325222.8 protein_coding 148698912,148729962,148753976,148756983,148759304,148759548,148760333,148766561,148767619,148783783,148783971,148786551,148786989,148788557,148789750,148790310,148792726,148797812,148797937,148798572,148799275,148800502 148699029,148730262,148754150,148757150,148759354,148759638,148760496,148766723,148767749,148783890,148784077,148786599,148787120,148788674,148789826,148790441,148792818,148797859,148798019,148798677,148799388,148801036 Gene ID= ENSG00000055130.15 TPM= 88.29 Transcript Type= protein_coding chr7 148807385 148884245 148807385 148884245 - ENST00000460911.5@EZH2 ENST00000460911.5 protein_coding 148884164,148847182,148846470,148832634,148829728,148828740,148827164,148826469,148819596,148817877,148817222,148816684,148815506,148814914,148813959,148811625,148810333,148809310,148809071,148807385 148884245,148847305,148846598,148832750,148829848,148828880,148827266,148826632,148819687,148818117,148817391,148816778,148815546,148815039,148814137,148811720,148810414,148809390,148809155,148807706 Gene ID= ENSG00000106462.10 TPM= 1.81 Transcript Type= protein_coding chr7 149003062 149028641 149003062 149028641 - ENST00000286091.8@PDIA4 ENST00000286091.8 protein_coding 149028321,149020967,149018992,149014904,149012155,149011846,149008159,149005897,149005141,149003062 149028641,149021147,149019197,149015042,149012360,149012004,149008310,149006053,149005374,149004209 Gene ID= ENSG00000155660.10 TPM= 179.3 Transcript Type= protein_coding chr7 149069970 149091588 149069970 149091588 - transcript4200.chr7.nnic@ZNF786 transcript4200.chr7.nnic protein_coding 149090623,149080591,149074386,149069970 149091588,149080717,149074538,149072379 Gene ID= ENSG00000197362.14 TPM= 2.11 Transcript Type= NA chr7 149069643 149090782 149069643 149090782 - ENST00000316286.13@ZNF786 ENST00000316286.13 protein_coding 149090623,149074386,149069643 149090782,149074538,149072473 Gene ID= ENSG00000197362.14 TPM= 6.64 Transcript Type= protein_coding chr7 149069963 149090705 149069963 149090705 - ENST00000491431.1@ZNF786 ENST00000491431.1 protein_coding 149090623,149080591,149074386,149069963 149090705,149080717,149074538,149072473 Gene ID= ENSG00000197362.14 TPM= 5.73 Transcript Type= protein_coding chr7 149102784 149126346 149102784 149126346 - ENST00000378061.6@ZNF425 ENST00000378061.6 protein_coding 149126196,149118222,149112137,149102784 149126346,149118348,149112295,149105566 Gene ID= ENSG00000204947.8 TPM= 3.62 Transcript Type= protein_coding chr7 149195485 149226248 149195485 149226248 + ENST00000610704.4@ZNF282 ENST00000610704.4 protein_coding 149195485,149198333,149206696,149207351,149210585,149212358,149213701,149223812 149195754,149198752,149206822,149207470,149210704,149212471,149213814,149226248 Gene ID= ENSG00000170265.11 TPM= 9.96 Transcript Type= protein_coding chr7 149239634 149255593 149239634 149255593 + transcript4224.chr7.nic@ZNF212 transcript4224.chr7.nic protein_coding 149239634,149250159,149250681,149251210,149252706,149253559 149239802,149250548,149250807,149251327,149252795,149255593 Gene ID= ENSG00000170260.8 TPM= 1.81 Transcript Type= NA chr7 149239651 149255609 149239651 149255609 + ENST00000335870.6@ZNF212 ENST00000335870.6 protein_coding 149239651,149250159,149250681,149252706,149253559 149239802,149250548,149250807,149252795,149255609 Gene ID= ENSG00000170260.8 TPM= 25.36 Transcript Type= protein_coding chr7 149262201 149297301 149262201 149297301 + transcript4216.chr7.nnic@ZNF783 transcript4216.chr7.nnic protein_coding 149262201,149266335,149266819,149267097,149278399,149287565,149288431,149289938,149292211,149293377,149293751,149294380,149294540,149297051 149262357,149266730,149266945,149267222,149278527,149287916,149288691,149290038,149292308,149293492,149294016,149294412,149295183,149297301 Gene ID= ENSG00000204946.9 TPM= 1.81 Transcript Type= NA chr7 149431367 149460863 149431367 149460863 - transcript4230.chr7.nnic@ZNF777 transcript4230.chr7.nnic protein_coding 149460030,149455177,149454111,149450999,149436575,149431367 149460863,149456037,149454237,149451112,149436826,149432932 Gene ID= ENSG00000196453.7 TPM= 45.73 Transcript Type= NA chr7 149431363 149461123 149431363 149461123 - ENST00000247930.4@ZNF777 ENST00000247930.4 protein_coding 149460815,149455177,149454111,149450999,149436575,149431363 149461123,149456037,149454237,149451112,149436826,149432932 Gene ID= ENSG00000196453.7 TPM= 11.32 Transcript Type= protein_coding chr7 149472770 149497860 149472770 149497860 - transcript4234.chr7.nnic@ZNF746 transcript4234.chr7.nnic protein_coding 149497513,149494204,149493989,149492859,149477564,149476922,149472770 149497860,149494503,149494115,149492972,149477755,149477047,149475483 Gene ID= ENSG00000181220.15 TPM= 14.04 Transcript Type= NA chr7 149472794 149497817 149472794 149497817 - ENST00000340622.7@ZNF746 ENST00000340622.7 protein_coding 149497513,149494204,149493989,149492859,149477564,149476922,149472794 149497817,149494503,149494070,149492972,149477755,149477047,149475480 Gene ID= ENSG00000181220.15 TPM= 15.85 Transcript Type= protein_coding chr7 149472796 149497807 149472796 149497807 - ENST00000458143.6@ZNF746 ENST00000458143.6 protein_coding 149497513,149494204,149493989,149492859,149477564,149476922,149472796 149497807,149494503,149494070,149492972,149477755,149477047,149475483 Gene ID= ENSG00000181220.15 TPM= 5.89 Transcript Type= protein_coding chr7 149547161 149624729 149547161 149624729 - transcript4242.chr7.nnic@ZNF767P transcript4242.chr7.nnic transcribed_unprocessed_pseudogene 149624542,149621260,149621046,149619924,149558608,149552801,149551574,149550868,149549193,149547161 149624729,149621559,149621172,149620037,149558839,149553016,149551826,149550946,149549374,149547928 Gene ID= ENSG00000133624.13 TPM= 1.81 Transcript Type= NA chr7 149547161 149624729 149547161 149624729 - transcript4244.chr7.nic@ZNF767P transcript4244.chr7.nic transcribed_unprocessed_pseudogene 149624542,149621260,149621046,149619924,149558608,149552801,149551574,149550868,149547161 149624729,149621559,149621172,149620037,149558839,149553013,149551826,149550946,149549374 Gene ID= ENSG00000133624.13 TPM= 3.62 Transcript Type= NA chr7 149714782 149734573 149714782 149734573 + transcript4245.chr7.nic@KRBA1 transcript4245.chr7.nic protein_coding 149714782,149719546,149720008,149720835,149721380,149722422,149722783,149723734,149724652,149725315,149725887,149728523,149729188,149730147,149730428,149731672,149733206 149715066,149719672,149720127,149720990,149721535,149722553,149722956,149723889,149724849,149725488,149726060,149728675,149729370,149730341,149730568,149731776,149734573 Gene ID= ENSG00000133619.17 TPM= 3.17 Transcript Type= NA chr7 149715011 149734571 149715011 149734571 + ENST00000496259.5@KRBA1 ENST00000496259.5 protein_coding 149715011,149719546,149720008,149720835,149721383,149722422,149722783,149723734,149724652,149725315,149725887,149728523,149729188,149730147,149730428,149731672,149733206 149715066,149719672,149720127,149720990,149721535,149722553,149722956,149723889,149724849,149725488,149726060,149728675,149729370,149730341,149730568,149731776,149734571 Gene ID= ENSG00000133619.17 TPM= 3.17 Transcript Type= protein_coding chr7 149764184 149776531 149764184 149776531 - transcript4250.chr7.nnic@ZNF467 transcript4250.chr7.nnic protein_coding 149776236,149773108,149770999,149770440,149769090,149764184 149776531,149773305,149771074,149770556,149769200,149766239 Gene ID= ENSG00000181444.12 TPM= 6.34 Transcript Type= NA chr7 149764366 149773454 149764366 149773454 - transcript4254.chr7.nnic@ZNF467 transcript4254.chr7.nnic protein_coding 149773108,149770999,149770440,149764366 149773454,149771074,149770556,149766239 Gene ID= ENSG00000181444.12 TPM= 2.72 Transcript Type= NA chr7 149838412 149852166 149838412 149852166 + transcript4260.chr7.nic@ZNF862 transcript4260.chr7.nic protein_coding 149838412,149844625,149846151,149847735,149850161 149838635,149844736,149846255,149848432,149852166 Gene ID= ENSG00000106479.10 TPM= 3.62 Transcript Type= NA chr7 149867768 149873843 149867768 149873843 - transcript4264.chr7.nnic@ATP6V0E2-AS1 transcript4264.chr7.nnic antisense_RNA 149873224,149871677,149870242,149867768 149873843,149871796,149870351,149869858 Gene ID= ENSG00000204934.10 TPM= 1.81 Transcript Type= NA chr7 149867773 149873845 149867773 149873845 - ENST00000461019.5@ATP6V0E2-AS1 ENST00000461019.5 antisense_RNA 149873224,149871642,149870242,149867773 149873845,149871796,149870351,149869858 Gene ID= ENSG00000204934.10 TPM= 3.62 Transcript Type= antisense_RNA chr7 149874043 149880695 149874043 149880695 + ENST00000425642.2@ATP6V0E2 ENST00000425642.2 protein_coding 149874043,149875598,149878678,149879335 149874169,149875645,149878790,149880695 Gene ID= ENSG00000171130.17 TPM= 4.53 Transcript Type= protein_coding chr7 150247213 150323787 150247213 150323787 - transcript4279.chr7.nic@ACTR3C transcript4279.chr7.nic protein_coding 150323469,150295252,150293312,150289450,150286367,150284753,150248948,150247213 150323787,150295347,150293419,150289593,150286540,150284845,150249054,150247569 Gene ID= ENSG00000106526.10 TPM= 10.87 Transcript Type= NA chr7 150247139 150323545 150247139 150323545 - transcript4281.chr7.nic@ACTR3C transcript4281.chr7.nic protein_coding 150323469,150295252,150293312,150289450,150286367,150284753,150247139 150323545,150295347,150293419,150289593,150286540,150284845,150249054 Gene ID= ENSG00000106526.10 TPM= 1.81 Transcript Type= NA chr7 150322631 150332762 150322631 150332762 + transcript4315.chr7.nic@LRRC61 transcript4315.chr7.nic protein_coding 150322631,150325841,150328635 150323212,150326010,150332762 Gene ID= ENSG00000127399.14 TPM= 101.12 Transcript Type= NA chr7 150322631 150332719 150322631 150332719 + transcript4316.chr7.nnic@LRRC61 transcript4316.chr7.nnic protein_coding 150322631,150325841,150330107 150323212,150326010,150332719 Gene ID= ENSG00000127399.14 TPM= 8.76 Transcript Type= NA chr7 150322631 150338157 150322631 150338157 + transcript4317.chr7.nic@LRRC61 transcript4317.chr7.nic protein_coding 150322631,150325841,150336718 150323212,150326010,150338157 Gene ID= ENSG00000127399.14 TPM= 24.45 Transcript Type= NA chr7 150323188 150332719 150323188 150332719 + transcript4319.chr7.nnic@LRRC61 transcript4319.chr7.nnic protein_coding 150323188,150325841,150330107 150323560,150326010,150332719 Gene ID= ENSG00000127399.14 TPM= 8.76 Transcript Type= NA chr7 150323287 150338150 150323287 150338150 + ENST00000359623.8@LRRC61 ENST00000359623.8 protein_coding 150323287,150325841,150336718 150323560,150326010,150338150 Gene ID= ENSG00000127399.14 TPM= 38.94 Transcript Type= protein_coding chr7 150338319 150341674 150338319 150341674 - ENST00000223271.7@RARRES2 ENST00000223271.7 protein_coding 150341578,150340436,150340100,150338986,150338615,150338319 150341674,150340629,150340204,150339081,150338741,150338439 Gene ID= ENSG00000106538.9 TPM= 2341.1 Transcript Type= protein_coding chr7 150338317 150341660 150338317 150341660 - ENST00000478771.2@RARRES2 ENST00000478771.2 protein_coding 150340100,150338986,150338615,150338317 150341660,150339081,150338741,150338439 Gene ID= ENSG00000106538.9 TPM= 20.91 Transcript Type= retained_intron chr7 150338358 150341643 150338358 150341643 - ENST00000466675.5@RARRES2 ENST00000466675.5 protein_coding 150340436,150340100,150338986,150338615,150338358 150341643,150340204,150339081,150338741,150338439 Gene ID= ENSG00000106538.9 TPM= 105.04 Transcript Type= protein_coding chr7 150338337 150341662 150338337 150341662 - ENST00000467793.5@RARRES2 ENST00000467793.5 protein_coding 150341578,150340436,150340100,150338986,150338337 150341662,150340629,150340204,150339081,150338439 Gene ID= ENSG00000106538.9 TPM= 2.9 Transcript Type= protein_coding chr7 150368063 150374045 150368063 150374045 + transcript4335.chr7.nic@REPIN1 transcript4335.chr7.nic protein_coding 150368063,150369671,150371228 150368318,150369868,150374045 Gene ID= ENSG00000214022.11 TPM= 22.41 Transcript Type= NA chr7 150369069 150374043 150369069 150374043 + transcript4342.chr7.nic@REPIN1 transcript4342.chr7.nic protein_coding 150369069,150370760,150371228 150369868,150370884,150374043 Gene ID= ENSG00000214022.11 TPM= 20.15 Transcript Type= NA chr7 150369089 150374045 150369089 150374045 + transcript4343.chr7.nnic@REPIN1 transcript4343.chr7.nnic protein_coding 150369089,150369671,150371228 150369563,150369868,150374045 Gene ID= ENSG00000214022.11 TPM= 17.88 Transcript Type= NA chr7 150379335 150398631 150379335 150398631 + ENST00000329630.9@ZNF775 ENST00000329630.9 protein_coding 150379335,150388422,150396513 150379392,150388501,150398631 Gene ID= ENSG00000196456.11 TPM= 31.69 Transcript Type= protein_coding chr7 150405674 150412467 150405674 150412467 + transcript4357.chr7.nic@AC073111.5 transcript4357.chr7.nic protein_coding 150405674,150407584,150410160 150405904,150408488,150412467 Gene ID= ENSG00000284691.1 TPM= 18.11 Transcript Type= NA chr7 150450630 150479392 150450630 150479392 + ENST00000307271.3@GIMAP8 ENST00000307271.3 protein_coding 150450630,150466671,150470829,150474012,150477092 150451175,150467334,150470874,150474638,150479392 Gene ID= ENSG00000171115.3 TPM= 18.11 Transcript Type= protein_coding chr7 150514830 150521073 150514830 150521073 + ENST00000313543.4@GIMAP7 ENST00000313543.4 protein_coding 150514830,150519934 150514945,150521073 Gene ID= ENSG00000179144.4 TPM= 16.3 Transcript Type= protein_coding chr7 150625375 150632385 150625375 150632385 - ENST00000328902.9@GIMAP6 ENST00000328902.9 protein_coding 150632169,150630058,150625375 150632385,150630142,150628512 Gene ID= ENSG00000133561.15 TPM= 31.69 Transcript Type= protein_coding chr7 150685700 150693641 150685700 150693641 + ENST00000223293.9@GIMAP2 ENST00000223293.9 protein_coding 150685700,150687052,150692315 150685785,150687087,150693641 Gene ID= ENSG00000106560.10 TPM= 6.34 Transcript Type= protein_coding chr7 150716557 150724284 150716557 150724284 + ENST00000307194.5@GIMAP1 ENST00000307194.5 protein_coding 150716557,150719042,150720048 150716690,150719090,150724284 Gene ID= ENSG00000213203.2 TPM= 16.3 Transcript Type= protein_coding chr7 150737348 150744063 150737348 150744063 + ENST00000358647.4@GIMAP5 ENST00000358647.4 protein_coding 150737348,150740879,150742183 150737708,150740927,150744063 Gene ID= ENSG00000196329.11 TPM= 38.03 Transcript Type= protein_coding chr7 150791290 150800327 150791290 150800327 - transcript4376.chr7.nnic@TMEM176B transcript4376.chr7.nnic protein_coding 150800293,150797500,150796366,150793961,150793544,150793088,150792056,150791290 150800327,150797527,150796574,150794071,150793600,150793315,150792175,150791623 Gene ID= ENSG00000106565.17 TPM= 1.81 Transcript Type= NA chr7 150791290 150800377 150791290 150800377 - transcript4377.chr7.nnic@TMEM176B transcript4377.chr7.nnic protein_coding 150800298,150799120,150796366,150793961,150793544,150793088,150792056,150791290 150800377,150799177,150796574,150794071,150793600,150793315,150792175,150791623 Gene ID= ENSG00000106565.17 TPM= 1.81 Transcript Type= NA chr7 150791292 150800533 150791292 150800533 - ENST00000434545.5@TMEM176B ENST00000434545.5 protein_coding 150800291,150796366,150793961,150793544,150793088,150792056,150791292 150800533,150796577,150794071,150793600,150793315,150792175,150791623 Gene ID= ENSG00000106565.17 TPM= 64.29 Transcript Type= protein_coding chr7 150791287 150801360 150791287 150801360 - ENST00000447204.6@TMEM176B ENST00000447204.6 protein_coding 150800993,150796366,150793961,150793544,150793088,150792056,150791287 150801360,150796574,150794071,150793600,150793315,150792175,150791623 Gene ID= ENSG00000106565.17 TPM= 1.81 Transcript Type= protein_coding chr7 150791302 150800367 150791302 150800367 - ENST00000450753.2@TMEM176B ENST00000450753.2 protein_coding 150800298,150796366,150793544,150793088,150792056,150791302 150800367,150796574,150793600,150793315,150792175,150791623 Gene ID= ENSG00000106565.17 TPM= 1.81 Transcript Type= protein_coding chr7 150800753 150805117 150800753 150805117 + transcript4383.chr7.nic@TMEM176A transcript4383.chr7.nic protein_coding 150800753,150801536,150802215,150803400,150803620,150804362,150804827 150800828,150801724,150802325,150803456,150803832,150804485,150805117 Gene ID= ENSG00000002933.7 TPM= 1.81 Transcript Type= NA chr7 150993752 151015646 150993752 151015646 + transcript4389.chr7.nic@NOS3 transcript4389.chr7.nic protein_coding 150993752,150995203,150996404,150996763,150998357,150998539,150998946,150999190,151000498,151001231,151001544,151001821,151002200,151006427,151006889,151007102,151008930,151009189,151009398,151010115,151010597,151010899,151012351,151013231,151013724,151014008 150993961,150995314,150996552,150996925,150998448,150998680,150999085,150999364,151000599,151001425,151001617,151001965,151002304,151006494,151007005,151007276,151009062,151009267,151009585,151010287,151010807,151010986,151012472,151013379,151013918,151015646 Gene ID= ENSG00000164867.10 TPM= 42.56 Transcript Type= NA chr7 151028423 151047782 151028423 151047782 + ENST00000358849.8@ABCB8 ENST00000358849.8 protein_coding 151028423,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209 151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782 Gene ID= ENSG00000197150.12 TPM= 50.71 Transcript Type= protein_coding chr7 151028422 151047782 151028422 151047782 + ENST00000542328.5@ABCB8 ENST00000542328.5 protein_coding 151028422,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209 151028610,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151047782 Gene ID= ENSG00000197150.12 TPM= 4.53 Transcript Type= protein_coding chr7 151028426 151037587 151028426 151037587 + transcript4438.chr7.nic@ABCB8 transcript4438.chr7.nic protein_coding 151028426,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151037284 151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151037587 Gene ID= ENSG00000197150.12 TPM= 6.34 Transcript Type= NA chr7 151028450 151045562 151028450 151045562 + ENST00000297504.10@ABCB8 ENST00000297504.10 protein_coding 151028450,151031241,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151040268,151040498,151040828,151041099,151041961,151043971,151045209 151028610,151031291,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151040301,151040634,151040922,151041232,151042108,151044221,151045562 Gene ID= ENSG00000197150.12 TPM= 8.15 Transcript Type= protein_coding chr7 151028467 151037570 151028467 151037570 + ENST00000477092.5@ABCB8 ENST00000477092.5 protein_coding 151028467,151033605,151034273,151034505,151034724,151035581,151035882,151036073,151036544,151037241 151028610,151033917,151034428,151034599,151034829,151035742,151035967,151036170,151036649,151037570 Gene ID= ENSG00000197150.12 TPM= 4.53 Transcript Type= protein_coding chr7 151053812 151058530 151053812 151058530 - ENST00000485972.5@CDK5 ENST00000485972.5 protein_coding 151057812,151057072,151056908,151056736,151056580,151055753,151055532,151055277,151055027,151054405,151054212,151053812 151058530,151057160,151056975,151056796,151056636,151055848,151055606,151055373,151055096,151054465,151054292,151054095 Gene ID= ENSG00000164885.12 TPM= 25.36 Transcript Type= protein_coding chr7 151061242 151076528 151061242 151076528 + transcript4405.chr7.nic@SLC4A2 transcript4405.chr7.nic protein_coding 151061242,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287 151061521,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076528 Gene ID= ENSG00000164889.13 TPM= 25.97 Transcript Type= NA chr7 151059564 151076528 151059564 151076528 + transcript4408.chr7.nnic@SLC4A2 transcript4408.chr7.nnic protein_coding 151059564,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287 151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076528 Gene ID= ENSG00000164889.13 TPM= 11.55 Transcript Type= NA chr7 151059570 151076527 151059570 151076527 + ENST00000413384.6@SLC4A2 ENST00000413384.6 protein_coding 151059570,151061925,151064202,151064526,151064848,151066517,151066851,151067874,151069947,151070181,151070457,151070727,151071072,151071390,151071689,151071942,151074039,151074399,151074675,151075255,151075606,151076013,151076287 151059762,151062038,151064367,151064767,151064966,151066761,151066993,151068054,151070082,151070346,151070571,151070911,151071297,151071605,151071837,151072136,151074293,151074488,151074841,151075508,151075775,151076186,151076527 Gene ID= ENSG00000164889.13 TPM= 352.87 Transcript Type= protein_coding chr7 151076620 151080842 151076620 151080842 - transcript4441.chr7.nic@FASTK transcript4441.chr7.nic protein_coding 151080437,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076620 151080842,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832 Gene ID= ENSG00000164896.19 TPM= 20.94 Transcript Type= NA chr7 151076549 151080846 151076549 151080846 - transcript4449.chr7.nic@FASTK transcript4449.chr7.nic protein_coding 151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076549 151080846,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832 Gene ID= ENSG00000164896.19 TPM= 10.07 Transcript Type= NA chr7 151076626 151080844 151076626 151080844 - ENST00000297532.10@FASTK ENST00000297532.10 protein_coding 151080685,151079500,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626 151080844,151079922,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832 Gene ID= ENSG00000164896.19 TPM= 131.65 Transcript Type= protein_coding chr7 151076646 151080790 151076646 151080790 - ENST00000482806.5@FASTK ENST00000482806.5 protein_coding 151080685,151079500,151078842,151078562,151077879,151077621,151077101,151076913,151076646 151080790,151079922,151079021,151078701,151078092,151077780,151077401,151077027,151076832 Gene ID= ENSG00000164896.19 TPM= 3.62 Transcript Type= retained_intron chr7 151076626 151080842 151076626 151080842 - ENST00000353841.6@FASTK ENST00000353841.6 protein_coding 151080685,151078842,151078562,151077879,151077621,151077310,151077101,151076913,151076626 151080842,151079021,151078701,151078092,151077780,151077401,151077236,151077027,151076832 Gene ID= ENSG00000164896.19 TPM= 11.21 Transcript Type= protein_coding chr7 151081080 151083542 151081080 151083542 - transcript4483.chr7.nnic@TMUB1 transcript4483.chr7.nnic protein_coding 151083434,151082175,151081080 151083542,151082458,151081900 Gene ID= ENSG00000164897.12 TPM= 9.96 Transcript Type= NA chr7 151081080 151083546 151081080 151083546 - ENST00000297533.8@TMUB1 ENST00000297533.8 protein_coding 151083434,151082175,151081080 151083546,151082593,151081900 Gene ID= ENSG00000164897.12 TPM= 83.31 Transcript Type= protein_coding chr7 151086262 151144441 151086262 151144441 + transcript4491.chr7.nnic@AGAP3 transcript4491.chr7.nnic protein_coding 151086262,151086826,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151138143,151139979,151141898,151142163,151142412,151143341,151143737 151086549,151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151138313,151140116,151142052,151142253,151142634,151143596,151144441 Gene ID= ENSG00000133612.18 TPM= 6.64 Transcript Type= NA chr7 151086302 151144441 151086302 151144441 + transcript4514.chr7.nic@AGAP3 transcript4514.chr7.nic protein_coding 151086302,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151139979,151141898,151142163,151142412,151143341,151143737 151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151140116,151142052,151142253,151142634,151143596,151144441 Gene ID= ENSG00000133612.18 TPM= 2.83 Transcript Type= NA chr7 151086458 151144441 151086458 151144441 + transcript4522.chr7.nic@AGAP3 transcript4522.chr7.nic protein_coding 151086458,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151123794,151128580,151134400,151141898,151142163,151142412,151143341,151143737 151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151123886,151128684,151134568,151142052,151142253,151142634,151143596,151144441 Gene ID= ENSG00000133612.18 TPM= 13.69 Transcript Type= NA chr7 151086302 151123638 151086302 151123638 + transcript4530.chr7.nic@AGAP3 transcript4530.chr7.nic protein_coding 151086302,151116793,151117095,151117371,151117636,151118210,151118505,151119987,151120520,151122725 151087072,151116851,151117182,151117456,151117777,151118344,151118632,151120145,151120745,151123638 Gene ID= ENSG00000133612.18 TPM= 8.15 Transcript Type= NA chr7 151212490 151227230 151212490 151227230 - ENST00000287844.6@ABCF2 ENST00000287844.6 protein_coding 151227163,151226305,151224776,151223932,151223678,151222521,151221578,151219064,151218754,151218561,151218081,151215967,151215604,151214879,151212490 151227230,151226500,151224988,151224114,151223849,151222616,151221680,151219159,151218873,151218650,151218191,151216029,151215732,151215082,151214191 Gene ID= ENSG00000033050.7 TPM= 81.5 Transcript Type= protein_coding chr7 151232460 151240976 151232460 151240976 + transcript4557.chr7.nnic@CHPF2 transcript4557.chr7.nnic protein_coding 151232460,151235048,151236408,151237374,151239600,151240019 151234274,151235612,151236590,151239197,151239752,151240976 Gene ID= ENSG00000033100.16 TPM= 3.62 Transcript Type= NA chr7 151232460 151238824 151232460 151238824 + transcript4559.chr7.nnic@CHPF2 transcript4559.chr7.nnic protein_coding 151232460,151235048,151236408,151237525 151234274,151235612,151236590,151238824 Gene ID= ENSG00000033100.16 TPM= 4.98 Transcript Type= NA chr7 151232460 151238819 151232460 151238819 + transcript4562.chr7.nnic@CHPF2 transcript4562.chr7.nnic protein_coding 151232460,151235048,151237374 151234274,151235612,151238819 Gene ID= ENSG00000033100.16 TPM= 5.28 Transcript Type= NA chr7 151232499 151238827 151232499 151238827 + ENST00000035307.6@CHPF2 ENST00000035307.6 protein_coding 151232499,151235048,151236408,151237374 151234274,151235612,151236590,151238827 Gene ID= ENSG00000033100.16 TPM= 105.34 Transcript Type= protein_coding chr7 151232489 151238819 151232489 151238819 + ENST00000495645.5@CHPF2 ENST00000495645.5 protein_coding 151232489,151234086,151235048,151236408,151237374 151232814,151234274,151235612,151236590,151238819 Gene ID= ENSG00000033100.16 TPM= 3.92 Transcript Type= protein_coding chr7 151238974 151248969 151238974 151248969 - transcript4540.chr7.nnic@SMARCD3 transcript4540.chr7.nnic protein_coding 151248485,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151241164,151240425,151240112,151239624,151239396,151238974 151248969,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151241394,151240522,151240247,151239746,151239497,151239156 Gene ID= ENSG00000082014.16 TPM= 3.26 Transcript Type= NA chr7 151238971 151252665 151238971 151252665 - transcript4547.chr7.nnic@SMARCD3 transcript4547.chr7.nnic protein_coding 151252602,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238971 151252665,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156 Gene ID= ENSG00000082014.16 TPM= 4.46 Transcript Type= NA chr7 151238976 151277142 151238976 151277142 - transcript4554.chr7.nic@SMARCD3 transcript4554.chr7.nic protein_coding 151277077,151275114,151245460,151243659,151242721,151242481,151242137,151241877,151240112,151239624,151239396,151238976 151277142,151275251,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151239746,151239497,151239156 Gene ID= ENSG00000082014.16 TPM= 3.62 Transcript Type= NA chr7 151238973 151248973 151238973 151248973 - ENST00000262188.12@SMARCD3 ENST00000262188.12 protein_coding 151248485,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973 151248973,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156 Gene ID= ENSG00000082014.16 TPM= 38.88 Transcript Type= protein_coding chr7 151238973 151277452 151238973 151277452 - ENST00000392811.6@SMARCD3 ENST00000392811.6 protein_coding 151277077,151275114,151245460,151243659,151242721,151242481,151242137,151241877,151241492,151240425,151240112,151239624,151239396,151238973 151277452,151275251,151245671,151243701,151242843,151242603,151242232,151241978,151241653,151240522,151240247,151239746,151239497,151239156 Gene ID= ENSG00000082014.16 TPM= 59.7 Transcript Type= protein_coding chr7 151341819 151378458 151341819 151378458 + transcript4567.chr7.nic@NUB1 transcript4567.chr7.nic protein_coding 151341819,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151366939,151367861,151368735,151374097,151375848,151376634,151377047 151341965,151345466,151349240,151351482,151352882,151355950,151356222,151360247,151367125,151367968,151368887,151374201,151375943,151376811,151378458 Gene ID= ENSG00000013374.15 TPM= 11.77 Transcript Type= NA chr7 151341804 151361249 151341804 151361249 + ENST00000468404.5@NUB1 ENST00000468404.5 protein_coding 151341804,151345348,151349073,151351424,151352812,151355768,151356128,151360141,151361059 151341846,151345466,151349240,151351482,151352882,151355950,151356222,151360914,151361249 Gene ID= ENSG00000013374.15 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr7 151381120 151410401 151381120 151410401 - transcript4570.chr7.nnic@WDR86 transcript4570.chr7.nnic protein_coding 151409427,151408887,151400100,151395776,151385088,151381878,151381120 151410401,151409053,151400241,151396196,151385223,151381981,151381746 Gene ID= ENSG00000187260.15 TPM= 2.72 Transcript Type= NA chr7 151381121 151410020 151381121 151410020 - ENST00000334493.10@WDR86 ENST00000334493.10 protein_coding 151409427,151400100,151395776,151385088,151381878,151381121 151410020,151400241,151396196,151385223,151381981,151381746 Gene ID= ENSG00000187260.15 TPM= 1.81 Transcript Type= protein_coding chr7 151466012 151519924 151466012 151519924 - ENST00000262187.9@RHEB ENST00000262187.9 protein_coding 151519460,151490943,151484737,151477333,151471549,151471394,151470571,151466012 151519924,151491014,151484804,151477415,151471605,151471441,151470652,151467211 Gene ID= ENSG00000106615.9 TPM= 210.09 Transcript Type= protein_coding chr7 151556117 151633123 151556117 151633123 - transcript4583.chr7.nic@PRKAG2 transcript4583.chr7.nic protein_coding 151632571,151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556117 151633123,151632138,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232 Gene ID= ENSG00000106617.13 TPM= 1.81 Transcript Type= NA chr7 151556124 151632353 151556124 151632353 - ENST00000418337.6@PRKAG2 ENST00000418337.6 protein_coding 151632069,151595345,151576371,151574891,151572664,151570171,151568716,151565720,151565346,151564078,151560524,151556124 151632353,151595454,151576452,151574949,151572709,151570225,151568842,151565885,151565383,151564224,151560617,151557232 Gene ID= ENSG00000106617.13 TPM= 9.96 Transcript Type= protein_coding chr7 151877465 151879223 151877465 151879223 + ENST00000467458.2@PRKAG2-AS1 ENST00000467458.2 antisense_RNA 151877465,151878562 151877866,151879223 Gene ID= ENSG00000239911.2 TPM= 1.81 Transcript Type= antisense_RNA chr7 152025658 152122357 152025658 152122357 + transcript4588.chr7.nnic@GALNT11 transcript4588.chr7.nnic protein_coding 152025658,152079287,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546 152025884,152079408,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122357 Gene ID= ENSG00000178234.12 TPM= 4.53 Transcript Type= NA chr7 152025667 152122357 152025667 152122357 + transcript4589.chr7.nic@GALNT11 transcript4589.chr7.nic protein_coding 152025667,152027597,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546 152025884,152027718,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122357 Gene ID= ENSG00000178234.12 TPM= 5.43 Transcript Type= NA chr7 152025675 152122357 152025675 152122357 + transcript4590.chr7.nnic@GALNT11 transcript4590.chr7.nnic protein_coding 152025675,152027670,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546 152025884,152027718,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122357 Gene ID= ENSG00000178234.12 TPM= 5.43 Transcript Type= NA chr7 152025638 152122357 152025638 152122357 + transcript4594.chr7.nic@GALNT11 transcript4594.chr7.nic protein_coding 152025638,152094190,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546 152025884,152094522,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122357 Gene ID= ENSG00000178234.12 TPM= 5.43 Transcript Type= NA chr7 152025693 152122347 152025693 152122347 + ENST00000430044.6@GALNT11 ENST00000430044.6 protein_coding 152025693,152094190,152100798,152103112,152105245,152108038,152110528,152113246,152117157,152118678,152120831,152121546 152025884,152094522,152100921,152103278,152105370,152108287,152110645,152113398,152117375,152118782,152120968,152122347 Gene ID= ENSG00000178234.12 TPM= 84.22 Transcript Type= protein_coding chr7 152759756 152855388 152759756 152855388 + transcript4605.chr7.nnic@ACTR3B transcript4605.chr7.nnic protein_coding 152759756,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458 152759926,152800655,152801731,152814645,152816588,152820347,152823515,152825122,152852251,152853577,152855388 Gene ID= ENSG00000133627.17 TPM= 2.11 Transcript Type= NA chr7 152759749 152855378 152759749 152855378 + ENST00000256001.12@ACTR3B ENST00000256001.12 protein_coding 152759749,152783187,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458 152759926,152783242,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152855378 Gene ID= ENSG00000133627.17 TPM= 9.35 Transcript Type= protein_coding chr7 152759788 152854949 152759788 152854949 + ENST00000397282.2@ACTR3B ENST00000397282.2 protein_coding 152759788,152800531,152801621,152814550,152816481,152820299,152823342,152825030,152852126,152853494,152854458 152759926,152800655,152801731,152814645,152816588,152820442,152823515,152825122,152852251,152853577,152854949 Gene ID= ENSG00000133627.17 TPM= 2.11 Transcript Type= protein_coding chr7 154928476 154952187 154928476 154952187 + transcript4613.chr7.nnic@PAXIP1-AS2 transcript4613.chr7.nnic antisense_RNA 154928476,154928956,154944027,154946360,154946640,154947731,154947898,154949298 154928767,154929024,154944620,154946493,154946791,154947773,154948090,154952187 Gene ID= ENSG00000214106.7 TPM= 2.72 Transcript Type= NA chr7 154928476 154952175 154928476 154952175 + transcript4618.chr7.nic@PAXIP1-AS2 transcript4618.chr7.nic antisense_RNA 154928476,154928956,154944027,154946360 154928767,154929024,154944620,154952175 Gene ID= ENSG00000214106.7 TPM= 1.81 Transcript Type= NA chr7 155003445 155004864 155003445 155004864 + transcript4620.chr7.nnic@PAXIP1-AS1 transcript4620.chr7.nnic lincRNA 155003445,155003962,155004341 155003708,155004134,155004864 Gene ID= ENSG00000273344.1 TPM= 1.81 Transcript Type= NA chr7 155297818 155310233 155297818 155310233 + transcript4626.chr7.nic@INSIG1 transcript4626.chr7.nic protein_coding 155297818,155298259,155301566,155302251,155302747,155303825,155308241 155297959,155298697,155301690,155302417,155302846,155303895,155310233 Gene ID= ENSG00000186480.12 TPM= 8.76 Transcript Type= NA chr7 155297776 155310235 155297776 155310235 + ENST00000340368.8@INSIG1 ENST00000340368.8 protein_coding 155297776,155298259,155301566,155302251,155302747,155308241 155297959,155298697,155301690,155302417,155302846,155310235 Gene ID= ENSG00000186480.12 TPM= 54.49 Transcript Type= protein_coding chr7 155297833 155310235 155297833 155310235 + transcript4629.chr7.nic@INSIG1 transcript4629.chr7.nic protein_coding 155297833,155298259,155301566,155302251,155302747,155308241 155298027,155298697,155301690,155302417,155302846,155310235 Gene ID= ENSG00000186480.12 TPM= 9.21 Transcript Type= NA chr7 155641916 155644377 155641916 155644377 - ENST00000460022.6@AC009403.1 ENST00000460022.6 antisense_RNA 155644214,155643468,155641916 155644377,155643604,155642970 Gene ID= ENSG00000216895.9 TPM= 3.62 Transcript Type= antisense_RNA chr7 155644451 155701183 155644451 155701183 + ENST00000287912.7@RBM33 ENST00000287912.7 protein_coding 155644451,155665175,155672867,155678608,155680590,155700773 155644919,155665253,155672915,155678684,155680908,155701183 Gene ID= ENSG00000184863.10 TPM= 5.43 Transcript Type= protein_coding chr7 155799986 155812273 155799986 155812273 - ENST00000297261.6@SHH ENST00000297261.6 protein_coding 155811823,155806296,155799986 155812273,155806557,155803726 Gene ID= ENSG00000164690.7 TPM= 9.06 Transcript Type= protein_coding chr7 156472099 156640593 156472099 156640593 - transcript4639.chr7.nic@LINC01006 transcript4639.chr7.nic lincRNA 156640536,156605658,156605188,156472099 156640593,156605764,156605380,156472711 Gene ID= ENSG00000182648.11 TPM= 2.72 Transcript Type= NA chr7 156679941 156893204 156679941 156893204 - transcript4645.chr7.nic@LMBR1 transcript4645.chr7.nic protein_coding 156892928,156836813,156833753,156826605,156796389,156779655,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156679941 156893204,156836885,156833792,156826744,156796492,156779732,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163 Gene ID= ENSG00000105983.20 TPM= 6.34 Transcript Type= NA chr7 156679941 156893204 156679941 156893204 - transcript4646.chr7.nic@LMBR1 transcript4646.chr7.nic protein_coding 156892928,156836813,156834478,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156679941 156893204,156836885,156834575,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163 Gene ID= ENSG00000105983.20 TPM= 3.85 Transcript Type= NA chr7 156679941 156892628 156679941 156892628 - transcript4647.chr7.nic@LMBR1 transcript4647.chr7.nic protein_coding 156892470,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156679941 156892628,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163 Gene ID= ENSG00000105983.20 TPM= 3.69 Transcript Type= NA chr7 156677791 156893230 156677791 156893230 - ENST00000353442.9@LMBR1 ENST00000353442.9 protein_coding 156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156677791 156893230,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163 Gene ID= ENSG00000105983.20 TPM= 90.48 Transcript Type= protein_coding chr7 156679941 156893204 156679941 156893204 - transcript4653.chr7.nnic@LMBR1 transcript4653.chr7.nnic protein_coding 156892928,156836813,156833753,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156688030,156679941 156893204,156836885,156833792,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156688191,156684163 Gene ID= ENSG00000105983.20 TPM= 6.57 Transcript Type= NA chr7 156680877 156893208 156680877 156893208 - ENST00000359422.8@LMBR1 ENST00000359422.8 protein_coding 156892928,156836813,156833753,156826605,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156680877 156893208,156836885,156833792,156826744,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156684163 Gene ID= ENSG00000105983.20 TPM= 7.7 Transcript Type= protein_coding chr7 156682940 156893204 156682940 156893204 - transcript4656.chr7.nnic@LMBR1 transcript4656.chr7.nnic protein_coding 156892928,156836813,156833753,156796389,156763669,156763108,156762134,156756393,156734177,156728644,156727930,156725764,156725435,156724112,156682940 156893204,156836885,156833792,156796492,156763795,156763176,156762198,156756465,156734257,156728720,156728007,156725837,156725525,156724178,156684163 Gene ID= ENSG00000105983.20 TPM= 2.87 Transcript Type= NA chr7 156949712 156969408 156949712 156969408 + transcript4660.chr7.nic@NOM1 transcript4660.chr7.nic protein_coding 156949712,156952474,156954103,156959851,156962151,156963008,156963905,156966270,156966961,156969087 156950724,156952598,156954298,156960174,156962261,156963175,156964026,156966402,156967092,156969408 Gene ID= ENSG00000146909.7 TPM= 1.81 Transcript Type= NA chr7 156949712 156964430 156949712 156964430 + transcript4662.chr7.nic@NOM1 transcript4662.chr7.nic protein_coding 156949712,156952474,156954103,156959851,156962151,156963008 156950724,156952598,156954298,156960174,156962261,156964430 Gene ID= ENSG00000146909.7 TPM= 6.34 Transcript Type= NA chr7 156949723 156973182 156949723 156973182 + ENST00000275820.3@NOM1 ENST00000275820.3 protein_coding 156949723,156952474,156954103,156959851,156962151,156963008,156963905,156966270,156966961,156969087,156969529 156950724,156952598,156954298,156960174,156962261,156963175,156964026,156966402,156967092,156969196,156973182 Gene ID= ENSG00000146909.7 TPM= 8.15 Transcript Type= protein_coding chr7 157138918 157269373 157138918 157269373 + transcript4666.chr7.nnic@UBE3C transcript4666.chr7.nnic protein_coding 157138918,157139222,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585 157139164,157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269373 Gene ID= ENSG00000009335.17 TPM= 18.41 Transcript Type= NA chr7 157138913 157269372 157138913 157269372 + ENST00000348165.9@UBE3C ENST00000348165.9 protein_coding 157138913,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585 157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269372 Gene ID= ENSG00000009335.17 TPM= 55.99 Transcript Type= protein_coding chr7 157138915 157269373 157138915 157269373 + transcript4672.chr7.nnic@UBE3C transcript4672.chr7.nnic protein_coding 157138915,157163810,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867,157220689,157223254,157225407,157231080,157248368,157253954,157254244,157256914,157267585 157139338,157163863,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157216971,157220776,157223351,157225539,157231327,157248580,157254142,157254310,157257044,157269373 Gene ID= ENSG00000009335.17 TPM= 10.26 Transcript Type= NA chr7 157138915 157217245 157138915 157217245 + transcript4676.chr7.nic@UBE3C transcript4676.chr7.nic protein_coding 157138915,157163810,157169048,157170304,157174919,157178690,157181518,157182108,157183878,157186834,157201721,157207398,157207703,157216867 157139338,157163863,157169122,157170450,157175034,157178847,157181671,157182328,157184029,157187021,157201807,157207555,157207935,157217245 Gene ID= ENSG00000009335.17 TPM= 4.07 Transcript Type= NA chr7 157336966 157417439 157336966 157417439 + ENST00000262177.8@DNAJB6 ENST00000262177.8 protein_coding 157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541,157409795,157416016 157337144,157358637,157363270,157366561,157367483,157382377,157385008,157385611,157410001,157417439 Gene ID= ENSG00000105993.14 TPM= 86.03 Transcript Type= protein_coding chr7 157336966 157386324 157336966 157386324 + ENST00000429029.6@DNAJB6 ENST00000429029.6 protein_coding 157336966,157358547,157363161,157366502,157367373,157382246,157384867,157385541 157337144,157358637,157363270,157366561,157367483,157382377,157385008,157386324 Gene ID= ENSG00000105993.14 TPM= 81.5 Transcript Type= protein_coding chr7 157539057 157682938 157539057 157682938 - transcript4691.chr7.nic@PTPRN2 transcript4691.chr7.nic protein_coding 157682725,157656357,157621362,157604002,157595238,157578021,157576613,157571440,157568902,157548946,157539057 157682938,157656551,157621509,157604075,157595315,157578140,157576779,157571493,157568966,157549019,157540785 Gene ID= ENSG00000155093.17 TPM= 2.72 Transcript Type= NA chr7 157539057 157569025 157539057 157569025 - transcript4693.chr7.nic@PTPRN2 transcript4693.chr7.nic protein_coding 157568902,157548946,157539057 157569025,157549019,157540785 Gene ID= ENSG00000155093.17 TPM= 8.15 Transcript Type= NA chr7 158631313 158704829 158631313 158704829 - ENST00000356309.7@NCAPG2 ENST00000356309.7 protein_coding 158704724,158701822,158693309,158692842,158690568,158689819,158687348,158686172,158683300,158680721,158679960,158675477,158671514,158664528,158664184,158662194,158658338,158656552,158656260,158655339,158655118,158654595,158652293,158650832,158646460,158645519,158644289,158631313 158704829,158701938,158693497,158692956,158690722,158689953,158687442,158686241,158683386,158680816,158680085,158675656,158671666,158664750,158664296,158662367,158658408,158656705,158656433,158655455,158655258,158654694,158652480,158650972,158646563,158645619,158644388,158631717 Gene ID= ENSG00000146918.19 TPM= 9.06 Transcript Type= protein_coding chr7 158730995 158829628 158730995 158829628 - ENST00000251527.9@ESYT2 ENST00000251527.9 protein_coding 158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158730995 158829628,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252 Gene ID= ENSG00000117868.15 TPM= 109.12 Transcript Type= protein_coding chr7 158733611 158829472 158733611 158829472 - ENST00000275418.11@ESYT2 ENST00000275418.11 protein_coding 158829089,158799031,158797942,158793650,158788345,158788004,158773341,158767654,158764677,158763083,158761496,158760058,158759486,158752781,158749649,158748194,158743529,158741523,158739023,158737048,158735503,158734422,158733611 158829472,158799072,158798076,158793726,158788417,158788093,158773396,158767774,158764853,158763165,158761544,158760147,158759581,158752843,158749723,158748280,158743678,158741896,158739121,158737179,158735608,158734471,158734252 Gene ID= ENSG00000117868.15 TPM= 9.96 Transcript Type= protein_coding chr7 158863419 158946191 158863419 158946191 + transcript4723.chr7.nnic@WDR60 transcript4723.chr7.nnic protein_coding 158863419,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158934418,158941925,158945581 158863575,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158934549,158942148,158946191 Gene ID= ENSG00000126870.15 TPM= 1.81 Transcript Type= NA chr7 158856578 158946189 158856578 158946189 + ENST00000407559.7@WDR60 ENST00000407559.7 protein_coding 158856578,158869855,158871142,158876609,158879684,158884564,158887021,158891265,158901739,158902376,158905989,158911550,158912985,158914233,158918740,158922377,158923571,158926187,158926402,158926992,158930455,158934129,158934418,158941925,158945581 158856750,158869908,158871562,158876691,158879989,158884619,158887075,158891333,158901816,158902595,158906091,158911679,158913096,158914321,158918869,158922549,158923733,158926300,158926463,158927043,158930515,158934228,158934549,158942148,158946189 Gene ID= ENSG00000126870.15 TPM= 15.39 Transcript Type= protein_coding chr8 232137 247340 232137 247340 + ENST00000320552.6@ZNF596 ENST00000320552.6 protein_coding 232137,240824,242887,243722,244619,245154 232267,240907,243013,243805,244701,247340 Gene ID= ENSG00000172748.13 TPM= 1.51 Transcript Type= protein_coding chr8 232200 247342 232200 247342 + ENST00000308811.8@ZNF596 ENST00000308811.8 protein_coding 232200,240824,242887,243722,244619,245154 232415,240907,243013,243805,244701,247342 Gene ID= ENSG00000172748.13 TPM= 2.42 Transcript Type= protein_coding chr8 232397 247340 232397 247340 + ENST00000398612.2@ZNF596 ENST00000398612.2 protein_coding 232397,240824,242887,243722,244619,245154 232694,240907,243013,243805,244701,247340 Gene ID= ENSG00000172748.13 TPM= 1.51 Transcript Type= protein_coding chr8 406808 469690 406808 469690 + ENST00000350302.7@FBXO25 ENST00000350302.7 protein_coding 406808,413073,431341,432886,435615,449990,451269,458369,463007,468715 407066,413213,431444,432935,435707,450083,451453,458551,463150,469690 Gene ID= ENSG00000147364.16 TPM= 14.04 Transcript Type= protein_coding chr8 406808 469871 406808 469871 + ENST00000352684.2@FBXO25 ENST00000352684.2 protein_coding 406808,413073,431341,435615,449990,451269,458369,463007,468715 407066,413213,431444,435707,450083,451453,458551,463150,469871 Gene ID= ENSG00000147364.16 TPM= 4.98 Transcript Type= protein_coding chr8 456455 544838 456455 544838 - transcript17.chr8.nnic@TDRP transcript17.chr8.nnic protein_coding 544650,494494,456455 544838,494597,457100 Gene ID= ENSG00000180190.11 TPM= 1.81 Transcript Type= NA chr8 664195 731230 664195 731230 - transcript20.chr8.nic@ERICH1 transcript20.chr8.nic protein_coding 731140,715861,692478,690898,673289,668598,664195 731230,716007,692612,691096,674047,668792,664676 Gene ID= ENSG00000104714.13 TPM= 1.81 Transcript Type= NA chr8 664200 731239 664200 731239 - ENST00000262109.7@ERICH1 ENST00000262109.7 protein_coding 731140,715861,692478,673289,668598,664200 731239,716007,692612,674047,668792,664676 Gene ID= ENSG00000104714.13 TPM= 6.34 Transcript Type= protein_coding chr8 1763704 1786570 1763704 1786570 + ENST00000331222.5@CLN8 ENST00000331222.5 protein_coding 1763704,1770932,1780250 1763885,1771597,1786570 Gene ID= ENSG00000182372.9 TPM= 5.43 Transcript Type= protein_coding chr8 1763815 1782681 1763815 1782681 + ENST00000635970.1@CLN8 ENST00000635970.1 protein_coding 1763815,1770932,1780250,1782356 1763885,1771597,1781144,1782681 Gene ID= ENSG00000182372.9 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr8 1761261 1763328 1761261 1763328 - transcript27.chr8.nnic@AC100810.1 transcript27.chr8.nnic antisense_RNA 1763023,1762779,1761261 1763328,1762928,1761824 Gene ID= ENSG00000253982.1 TPM= 3.62 Transcript Type= NA chr8 1762625 1763297 1762625 1763297 - ENST00000518481.1@AC100810.1 ENST00000518481.1 antisense_RNA 1763023,1762625 1763297,1762928 Gene ID= ENSG00000253982.1 TPM= 25.36 Transcript Type= antisense_RNA chr8 1823988 1958641 1823988 1958641 + ENST00000520359.5@ARHGEF10 ENST00000520359.5 protein_coding 1823988,1843353,1857960,1859897,1864370,1866526,1869194,1876571,1882635,1885601,1893569,1894393,1896333,1898433,1903281,1905571,1909295,1922964,1923468,1923774,1925283,1926377,1928427,1929286,1933800,1945481,1952705,1956749 1824113,1843436,1858115,1860184,1864436,1866602,1869250,1876734,1882749,1885707,1893646,1894572,1896449,1898525,1903451,1905716,1909470,1923079,1923595,1923874,1925404,1926463,1928650,1929443,1933942,1945655,1952827,1958641 Gene ID= ENSG00000104728.15 TPM= 6.34 Transcript Type= protein_coding chr8 1972129 1973850 1972129 1973850 - transcript35.chr8.nnic@AC019257.1 transcript35.chr8.nnic lincRNA 1973148,1972540,1972129 1973850,1972663,1972357 Gene ID= ENSG00000253764.1 TPM= 1.81 Transcript Type= NA chr8 1971248 1974640 1971248 1974640 - transcript36.chr8.nnic@AC019257.1 transcript36.chr8.nnic lincRNA 1973148,1972540,1971248 1974640,1973036,1972357 Gene ID= ENSG00000253764.1 TPM= 6.34 Transcript Type= NA chr8 1973878 2006936 1973878 2006936 + ENST00000320248.3@KBTBD11 ENST00000320248.3 protein_coding 1973878,2000285 1973935,2006936 Gene ID= ENSG00000176595.3 TPM= 24.45 Transcript Type= protein_coding chr8 2623353 2666702 2623353 2666702 - transcript47.chr8.nnic@AC245123.1 transcript47.chr8.nnic lincRNA 2664350,2661181,2623353 2666702,2661384,2623525 Gene ID= ENSG00000277526.4 TPM= 1.81 Transcript Type= NA chr8 6403551 6406548 6403551 6406548 - ENST00000500118.2@AC016065.1 ENST00000500118.2 antisense_RNA 6405706,6403551 6406548,6405120 Gene ID= ENSG00000246089.3 TPM= 4.53 Transcript Type= antisense_RNA chr8 6406592 6648504 6406592 6648504 + ENST00000344683.9@MCPH1 ENST00000344683.9 protein_coding 6406592,6409279,6414765,6431499,6436048,6438953,6442067,6444393,6455143,6477594,6480714,6499852,6621454,6642994 6406689,6409370,6414883,6431586,6436162,6439096,6442156,6445547,6455252,6477631,6480876,6499929,6621691,6648504 Gene ID= ENSG00000147316.12 TPM= 9.06 Transcript Type= protein_coding chr8 6708357 6759666 6708357 6759666 + ENST00000285518.10@AGPAT5 ENST00000285518.10 protein_coding 6708357,6724870,6730711,6732561,6741661,6747670,6755051,6757163 6708887,6724939,6730826,6732650,6741751,6747828,6755174,6759666 Gene ID= ENSG00000155189.11 TPM= 98.7 Transcript Type= protein_coding chr8 6977650 6980080 6977650 6980080 - ENST00000382692.2@DEFA1 ENST00000382692.2 protein_coding 6980013,6978460,6977650 6980080,6978646,6977879 Gene ID= ENSG00000206047.2 TPM= 6.34 Transcript Type= protein_coding chr8 6996766 6999195 6996766 6999195 - ENST00000382689.7@DEFA1B ENST00000382689.7 protein_coding 6999123,6997577,6996766 6999195,6997763,6996996 Gene ID= ENSG00000240247.7 TPM= 8.15 Transcript Type= protein_coding chr8 9136255 9150696 9136255 9150696 - ENST00000310455.3@PPP1R3B ENST00000310455.3 protein_coding 9150563,9136255 9150696,9141668 Gene ID= ENSG00000173281.4 TPM= 15.39 Transcript Type= protein_coding chr8 9555914 9782346 9555914 9782346 + ENST00000310430.10@TNKS ENST00000310430.10 protein_coding 9555914,9580159,9615582,9679951,9680725,9704663,9706187,9706811,9708371,9709955,9710142,9720374,9726641,9730890,9733279,9734865,9735377,9748024,9751609,9752544,9761516,9763147,9764716,9765692,9766239,9770106,9776650 9556612,9580383,9615677,9679987,9680800,9704757,9706253,9706997,9708492,9710046,9710220,9720545,9726720,9731035,9733444,9735084,9735486,9748212,9751846,9752626,9761636,9763244,9764790,9765797,9766425,9770262,9782346 Gene ID= ENSG00000173273.15 TPM= 6.34 Transcript Type= protein_coding chr8 10054297 10428889 10054297 10428889 + transcript79.chr8.nnic@MSRA transcript79.chr8.nnic protein_coding 10054297,10149148,10207833,10245104,10301534,10319883,10428148 10054658,10149264,10207901,10245223,10301638,10319989,10428889 Gene ID= ENSG00000175806.14 TPM= 2.26 Transcript Type= NA chr8 10054268 10428891 10054268 10428891 + ENST00000317173.8@MSRA ENST00000317173.8 protein_coding 10054268,10207833,10245104,10301534,10319883,10428148 10054658,10207901,10245223,10301638,10319989,10428891 Gene ID= ENSG00000175806.14 TPM= 18.56 Transcript Type= protein_coding chr8 10723768 10730512 10723768 10730512 - ENST00000304501.1@SOX7 ENST00000304501.1 protein_coding 10730196,10723768 10730512,10726666 Gene ID= ENSG00000171056.7 TPM= 13.58 Transcript Type= protein_coding chr8 10764963 10839876 10764963 10839876 - ENST00000314787.7@PINX1 ENST00000314787.7 protein_coding 10839738,10834666,10832892,10831665,10826152,10820193,10764963 10839876,10834775,10832984,10831743,10826244,10820269,10765916 Gene ID= ENSG00000254093.8 TPM= 9.96 Transcript Type= protein_coding chr8 10765159 10839876 10765159 10839876 - ENST00000519088.5@PINX1 ENST00000519088.5 protein_coding 10839738,10834666,10832892,10831665,10826152,10765159 10839876,10834775,10832984,10831743,10826244,10765916 Gene ID= ENSG00000254093.8 TPM= 3.62 Transcript Type= protein_coding chr8 11111733 11201831 11111733 11201831 - transcript88.chr8.nnic@XKR6 transcript88.chr8.nnic protein_coding 11200576,11114021,11111733 11201831,11114092,11111892 Gene ID= ENSG00000171044.10 TPM= 7.24 Transcript Type= NA chr8 11550043 11564598 11550043 11564598 + transcript91.chr8.nic@BLK transcript91.chr8.nic protein_coding 11550043,11554743,11555332,11556658,11557962,11561302,11562979,11563903 11550262,11554889,11555484,11556837,11558038,11561452,11563110,11564598 Gene ID= ENSG00000136573.12 TPM= 1.81 Transcript Type= NA chr8 11769639 11787345 11769639 11787345 + ENST00000436750.7@NEIL2 ENST00000436750.7 protein_coding 11769639,11771446,11779598,11783203,11785963 11769791,11771585,11779950,11783399,11787345 Gene ID= ENSG00000154328.15 TPM= 100.86 Transcript Type= protein_coding chr8 11769699 11787340 11769699 11787340 + ENST00000455213.6@NEIL2 ENST00000455213.6 protein_coding 11769699,11770174,11771446,11779598,11783203,11785963 11769791,11770335,11771585,11779950,11783399,11787340 Gene ID= ENSG00000154328.15 TPM= 27.74 Transcript Type= protein_coding chr8 11769739 11787346 11769739 11787346 + ENST00000284503.6@NEIL2 ENST00000284503.6 protein_coding 11769739,11771446,11779598,11783203,11785963 11770335,11771585,11779950,11783399,11787346 Gene ID= ENSG00000154328.15 TPM= 61.47 Transcript Type= protein_coding chr8 11769709 11787345 11769709 11787345 + ENST00000403422.7@NEIL2 ENST00000403422.7 protein_coding 11769709,11779598,11783203,11785963 11769791,11779950,11783399,11787345 Gene ID= ENSG00000154328.15 TPM= 1.86 Transcript Type= protein_coding chr8 11808417 11838967 11808417 11838967 + ENST00000525954.5@FDFT1 ENST00000525954.5 protein_coding 11808417,11809667,11821750,11826024,11830244,11831518,11838388 11808891,11809850,11821878,11826215,11830420,11831670,11838967 Gene ID= ENSG00000079459.12 TPM= 70.63 Transcript Type= protein_coding chr8 11842524 11868229 11842524 11868229 - ENST00000353047.10@CTSB ENST00000353047.10 protein_coding 11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11842524 11868229,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222 Gene ID= ENSG00000164733.20 TPM= 179.24 Transcript Type= protein_coding chr8 11844053 11868112 11844053 11868112 - ENST00000530640.6@CTSB ENST00000530640.6 protein_coding 11868001,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11845082,11844053 11868112,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222,11844241 Gene ID= ENSG00000164733.20 TPM= 10.11 Transcript Type= protein_coding chr8 11844094 11868112 11844094 11868112 - ENST00000531089.5@CTSB ENST00000531089.5 protein_coding 11868001,11864376,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11845082,11844094 11868112,11864463,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222,11844241 Gene ID= ENSG00000164733.20 TPM= 1.06 Transcript Type= protein_coding chr8 11844355 11868106 11844355 11868106 - ENST00000533455.5@CTSB ENST00000533455.5 protein_coding 11868001,11864376,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844355 11868106,11864463,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222 Gene ID= ENSG00000164733.20 TPM= 147.27 Transcript Type= protein_coding chr8 11844320 11868087 11844320 11868087 - ENST00000453527.6@CTSB ENST00000453527.6 protein_coding 11868001,11861406,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844320 11868087,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222 Gene ID= ENSG00000164733.20 TPM= 27.88 Transcript Type= protein_coding chr8 11844370 11868106 11844370 11868106 - ENST00000534510.5@CTSB ENST00000534510.5 protein_coding 11868001,11857858,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844370 11868106,11857940,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222 Gene ID= ENSG00000164733.20 TPM= 4.04 Transcript Type= protein_coding chr8 11844340 11868079 11844340 11868079 - ENST00000345125.7@CTSB ENST00000345125.7 protein_coding 11868001,11861361,11853329,11852610,11850866,11849046,11848067,11847679,11847052,11845661,11844340 11868079,11861479,11853479,11852695,11850980,11849164,11848152,11847822,11847168,11845789,11845222 Gene ID= ENSG00000164733.20 TPM= 2.38 Transcript Type= protein_coding chr8 12182091 12194080 12182091 12194080 - transcript145.chr8.nnic@FAM86B1 transcript145.chr8.nnic protein_coding 12193975,12191779,12189808,12188311,12188072,12186700,12186352,12185376,12183154,12182091 12194080,12191841,12189888,12188424,12188173,12186833,12186617,12185525,12183706,12183101 Gene ID= ENSG00000186523.14 TPM= 2.72 Transcript Type= NA chr8 12182091 12194080 12182091 12194080 - transcript148.chr8.nnic@FAM86B1 transcript148.chr8.nnic protein_coding 12193975,12191779,12189808,12188311,12188072,12186700,12185376,12183154,12182091 12194080,12191841,12189888,12188424,12188173,12186833,12185525,12183706,12183101 Gene ID= ENSG00000186523.14 TPM= 1.81 Transcript Type= NA chr8 12437012 12566914 12437012 12566914 - transcript166.chr8.nnic@AC068587.6 transcript166.chr8.nnic processed_transcript 12565886,12530943,12444756,12441000,12438164,12437012 12566914,12531031,12444894,12441061,12438511,12437710 Gene ID= ENSG00000283674.2 TPM= 3.62 Transcript Type= NA chr8 12721897 12755547 12721897 12755547 - transcript176.chr8.nic@LONRF1 transcript176.chr8.nic protein_coding 12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721897 12755547,12743282,12740996,12738144,12737140,12736764,12735400,12731857,12729332,12729063,12725879,12723254 Gene ID= ENSG00000154359.12 TPM= 24.45 Transcript Type= NA chr8 12721894 12755490 12721894 12755490 - ENST00000398246.7@LONRF1 ENST00000398246.7 protein_coding 12754700,12743164,12740874,12737995,12736900,12736701,12735286,12731736,12729174,12728901,12725727,12721894 12755490,12743282,12740996,12738144,12737140,12736797,12735400,12731857,12729332,12729063,12725879,12723254 Gene ID= ENSG00000154359.12 TPM= 29.88 Transcript Type= protein_coding chr8 13085577 13276546 13085577 13276546 - ENST00000512044.6@DLC1 ENST00000512044.6 protein_coding 13276262,13115586,13110742,13102790,13099347,13098399,13095086,13094759,13092612,13091318,13090252,13088487,13086290,13085577 13276546,13115657,13110823,13102853,13100770,13098575,13095245,13094957,13092825,13091432,13090470,13088704,13086463,13085931 Gene ID= ENSG00000164741.14 TPM= 2.72 Transcript Type= protein_coding chr8 15540213 15758282 15540213 15758282 + transcript185.chr8.nic@TUSC3 transcript185.chr8.nic protein_coding 15540213,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15757791,15758030 15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15757855,15758282 Gene ID= ENSG00000104723.20 TPM= 7.24 Transcript Type= NA chr8 15540283 15764459 15540283 15764459 + ENST00000503731.5@TUSC3 ENST00000503731.5 protein_coding 15540283,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15748375,15757791,15764203 15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15748465,15757855,15764459 Gene ID= ENSG00000104723.20 TPM= 33.51 Transcript Type= protein_coding chr8 15540233 15764613 15540233 15764613 + ENST00000506802.5@TUSC3 ENST00000506802.5 protein_coding 15540233,15623080,15650697,15659507,15662156,15673747,15730666,15743538,15764203 15540568,15623249,15650814,15659647,15662296,15673836,15730729,15743612,15764613 Gene ID= ENSG00000104723.20 TPM= 1.81 Transcript Type= protein_coding chr8 16109431 16192715 16109431 16192715 - ENST00000262101.9@MSR1 ENST00000262101.9 protein_coding 16192598,16177886,16175187,16168458,16164065,16155064,16150231,16143558,16120418,16109431 16192715,16177992,16175300,16168870,16164251,16155144,16150311,16143611,16120606,16110218 Gene ID= ENSG00000038945.14 TPM= 1.81 Transcript Type= protein_coding chr8 16139319 16192659 16139319 16192659 - ENST00000381998.8@MSR1 ENST00000381998.8 protein_coding 16192598,16177886,16175187,16168458,16164065,16155064,16150231,16143558,16139319 16192659,16177992,16175300,16168870,16164251,16155144,16150311,16143611,16141045 Gene ID= ENSG00000038945.14 TPM= 1.81 Transcript Type= protein_coding chr8 17027238 17122644 17027238 17122644 + ENST00000318063.9@MICU3 ENST00000318063.9 protein_coding 17027238,17064084,17069688,17077783,17081693,17085236,17086964,17090546,17098458,17104391,17105413,17114093,17116443,17118707,17120288 17027660,17064237,17069719,17077861,17081740,17085318,17087035,17090584,17098553,17104491,17105584,17114201,17116600,17118775,17122644 Gene ID= ENSG00000155970.11 TPM= 2.72 Transcript Type= protein_coding chr8 17156966 17225087 17156966 17225087 + transcript212.chr8.nnic@ZDHHC2 transcript212.chr8.nnic protein_coding 17156966,17184789,17186331,17195504,17197582,17198381,17205655,17207960,17209932,17210388,17215237,17217172,17220256 17157416,17184815,17186425,17195624,17197651,17198413,17205775,17208092,17210058,17210480,17215349,17217246,17225087 Gene ID= ENSG00000104219.12 TPM= 6.34 Transcript Type= NA chr8 17155984 17221012 17155984 17221012 + transcript216.chr8.nnic@ZDHHC2 transcript216.chr8.nnic protein_coding 17155984,17184789,17186331,17195504,17197582,17198381,17205655,17207960,17209932,17210388,17220256 17156853,17184815,17186425,17195624,17197651,17198413,17205775,17208092,17210058,17210480,17221012 Gene ID= ENSG00000104219.12 TPM= 1.81 Transcript Type= NA chr8 17156029 17224799 17156029 17224799 + ENST00000262096.12@ZDHHC2 ENST00000262096.12 protein_coding 17156029,17184789,17186331,17195504,17197582,17198381,17205655,17207960,17209932,17210388,17215237,17217172,17220256 17156853,17184815,17186425,17195624,17197651,17198413,17205775,17208092,17210058,17210480,17215349,17217246,17224799 Gene ID= ENSG00000104219.12 TPM= 77.88 Transcript Type= protein_coding chr8 17224964 17246878 17224964 17246878 - ENST00000361272.8@CNOT7 ENST00000361272.8 protein_coding 17246675,17245036,17242992,17237212,17234716,17232427,17224964 17246878,17245247,17243185,17237373,17234860,17232537,17230848 Gene ID= ENSG00000198791.11 TPM= 46.18 Transcript Type= protein_coding chr8 17231570 17246878 17231570 17246878 - ENST00000523917.5@CNOT7 ENST00000523917.5 protein_coding 17246675,17245036,17242992,17237212,17234716,17231570 17246878,17245247,17243185,17237373,17234860,17232537 Gene ID= ENSG00000198791.11 TPM= 2.72 Transcript Type= protein_coding chr8 17246941 17298025 17246941 17298025 + transcript218.chr8.nic@VPS37A transcript218.chr8.nic protein_coding 17246941,17265771,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987 17247369,17265815,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17298025 Gene ID= ENSG00000155975.9 TPM= 1.81 Transcript Type= NA chr8 17246571 17298024 17246571 17298024 + ENST00000324849.8@VPS37A ENST00000324849.8 protein_coding 17246571,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294987 17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17298024 Gene ID= ENSG00000155975.9 TPM= 61.58 Transcript Type= protein_coding chr8 17246922 17295545 17246922 17295545 + transcript220.chr8.nnic@VPS37A transcript220.chr8.nnic protein_coding 17246922,17265907,17268258,17268856,17274733,17276397,17280028,17280239,17280375,17284473,17286347,17294139 17247369,17265981,17268372,17268956,17274958,17276467,17280155,17280297,17280443,17284616,17286427,17295545 Gene ID= ENSG00000155975.9 TPM= 1.81 Transcript Type= NA chr8 17577193 17643131 17577193 17643131 + transcript233.chr8.nic@PDGFRL transcript233.chr8.nic protein_coding 17577193,17589468,17621051,17628487,17634074,17642613 17577307,17589765,17621202,17628780,17634213,17643131 Gene ID= ENSG00000104213.12 TPM= 2.72 Transcript Type= NA chr8 17643795 17801390 17643795 17801390 - transcript236.chr8.nnic@MTUS1 transcript236.chr8.nnic protein_coding 17801061,17753717,17743604,17723672,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643795 17801390,17755961,17743799,17723833,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139 Gene ID= ENSG00000129422.14 TPM= 13.81 Transcript Type= NA chr8 17643795 17801237 17643795 17801237 - transcript239.chr8.nnic@MTUS1 transcript239.chr8.nnic protein_coding 17801061,17753717,17743604,17715767,17713214,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643795 17801237,17755961,17743799,17715901,17713252,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139 Gene ID= ENSG00000129422.14 TPM= 2.94 Transcript Type= NA chr8 17643795 17676494 17643795 17676494 - transcript243.chr8.nic@MTUS1 transcript243.chr8.nic protein_coding 17675988,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643795 17676494,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139 Gene ID= ENSG00000129422.14 TPM= 20.15 Transcript Type= NA chr8 17643799 17697670 17643799 17697670 - ENST00000297488.10@MTUS1 ENST00000297488.10 protein_coding 17697257,17684328,17675186,17655863,17654561,17653425,17653186,17649846,17646982,17643799 17697670,17684542,17675252,17656065,17654666,17653498,17653281,17649962,17647079,17646139 Gene ID= ENSG00000129422.14 TPM= 23.77 Transcript Type= protein_coding chr8 17801344 17822362 17801344 17822362 + transcript255.chr8.nnic@AC027117.1 transcript255.chr8.nnic processed_transcript 17801344,17809597,17820358 17801742,17809687,17822362 Gene ID= ENSG00000253671.1 TPM= 1.81 Transcript Type= NA chr8 17922799 18027974 17922799 18027974 + transcript261.chr8.nic@PCM1 transcript261.chr8.nic protein_coding 17922799,17924713,17935589,17937134,17938740,17939691,17940042,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637 17923188,17924780,17935706,17937379,17939009,17939861,17940158,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980755,17985619,17986087,17989979,17991700,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027974 Gene ID= ENSG00000078674.17 TPM= 4.07 Transcript Type= NA chr8 17922993 18027974 17922993 18027974 + transcript263.chr8.nic@PCM1 transcript263.chr8.nic protein_coding 17922993,17924713,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591,17983233,17985447,17985959,17989859,17991542,17993483,18006263,18009547,18010609,18011237,18011667,18013964,18014584,18025361,18025544,18027637 17923188,17924780,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980755,17983289,17985619,17986087,17989979,17991700,17993619,18006397,18009744,18010668,18011366,18011827,18014036,18014840,18025453,18025658,18027974 Gene ID= ENSG00000078674.17 TPM= 2.26 Transcript Type= NA chr8 17922843 17989454 17922843 17989454 + transcript272.chr8.nnic@PCM1 transcript272.chr8.nnic protein_coding 17922843,17935589,17937134,17938740,17939691,17947186,17950615,17952970,17955470,17956604,17957264,17957540,17960014,17960315,17962034,17963101,17964568,17965999,17966328,17966980,17969577,17972329,17980591,17985447,17985959,17988952 17923188,17935706,17937379,17939009,17939861,17947363,17950724,17953186,17955653,17956777,17957421,17957775,17960165,17960444,17962174,17963291,17964768,17966218,17966473,17967170,17969748,17972687,17980755,17985619,17986087,17989454 Gene ID= ENSG00000078674.17 TPM= 1.81 Transcript Type= NA chr8 17922799 17955345 17922799 17955345 + transcript275.chr8.nic@PCM1 transcript275.chr8.nic protein_coding 17922799,17924713,17935589,17937134,17938740,17939691,17947186,17950615,17952970 17923188,17924780,17935706,17937379,17939009,17939861,17947363,17950724,17955345 Gene ID= ENSG00000078674.17 TPM= 3.62 Transcript Type= NA chr8 18065739 18084141 18065739 18084141 - transcript286.chr8.nnic@ASAH1 transcript286.chr8.nnic protein_coding 18083981,18075541,18071300,18069792,18067134,18065739 18084141,18075587,18071390,18069878,18067298,18067104 Gene ID= ENSG00000104763.18 TPM= 17.21 Transcript Type= NA chr8 18066763 18084148 18066763 18084148 - ENST00000637561.1@ASAH1 ENST00000637561.1 protein_coding 18083981,18075541,18071300,18069792,18066763 18084148,18075587,18071390,18069878,18067298 Gene ID= ENSG00000104763.18 TPM= 14.49 Transcript Type= protein_coding chr8 18210093 18223689 18210093 18223689 + ENST00000307719.8@NAT1 ENST00000307719.8 protein_coding 18210093,18219411,18222042 18210180,18219489,18223689 Gene ID= ENSG00000171428.13 TPM= 2.72 Transcript Type= protein_coding chr8 18762891 19013780 18762891 19013780 - transcript298.chr8.nic@PSD3 transcript298.chr8.nic protein_coding 19013563,18936034,18871626,18867674,18804704,18804522,18801270,18799295,18765449,18762891 19013780,18936142,18872733,18868069,18804898,18804602,18801382,18799353,18765538,18763025 Gene ID= ENSG00000156011.16 TPM= 2.11 Transcript Type= NA chr8 18799154 19013729 18799154 19013729 - transcript299.chr8.nic@PSD3 transcript299.chr8.nic protein_coding 19013563,18936034,18871626,18867674,18804704,18804522,18801270,18799154 19013729,18936142,18872733,18868069,18804898,18804602,18801382,18799353 Gene ID= ENSG00000156011.16 TPM= 2.11 Transcript Type= NA chr8 18865309 19013717 18865309 19013717 - transcript302.chr8.nic@PSD3 transcript302.chr8.nic protein_coding 19013563,18936034,18871626,18865309 19013717,18936142,18872733,18868069 Gene ID= ENSG00000156011.16 TPM= 3.92 Transcript Type= NA chr8 19313607 19398951 19313607 19398951 + transcript333.chr8.nic@SH2D4A transcript333.chr8.nic protein_coding 19313607,19319344,19332955,19334686,19361203,19364072,19373530,19393318,19394550 19313823,19319728,19333114,19334857,19361314,19364282,19373660,19393541,19398951 Gene ID= ENSG00000104611.11 TPM= 4.07 Transcript Type= NA chr8 19313985 19398951 19313985 19398951 + transcript335.chr8.nic@SH2D4A transcript335.chr8.nic protein_coding 19313985,19319344,19332955,19334686,19361203,19364072,19373530,19393318,19394550 19314079,19319728,19333114,19334857,19361314,19364282,19373660,19393541,19398951 Gene ID= ENSG00000104611.11 TPM= 5.89 Transcript Type= NA chr8 19313617 19396218 19313617 19396218 + ENST00000265807.7@SH2D4A ENST00000265807.7 protein_coding 19313617,19319344,19332955,19334686,19357203,19361203,19364072,19373530,19393318,19394550 19313823,19319728,19333114,19334857,19357283,19361314,19364282,19373660,19393541,19396218 Gene ID= ENSG00000104611.11 TPM= 5.43 Transcript Type= protein_coding chr8 19404157 19602731 19404157 19602731 - transcript319.chr8.nic@CSGALNACT1 transcript319.chr8.nic protein_coding 19601992,19601771,19505201,19458426,19457530,19439830,19420340,19418656,19408613,19404157 19602731,19601865,19506130,19458642,19457816,19439931,19420518,19418750,19408694,19406069 Gene ID= ENSG00000147408.14 TPM= 3.7 Transcript Type= NA chr8 19404157 19757304 19404157 19757304 - transcript328.chr8.nnic@CSGALNACT1 transcript328.chr8.nnic protein_coding 19757186,19601771,19585166,19505201,19458426,19439830,19420340,19418656,19408613,19404157 19757304,19601865,19585320,19506130,19458642,19439931,19420518,19418750,19408694,19406069 Gene ID= ENSG00000147408.14 TPM= 9.53 Transcript Type= NA chr8 19404157 19602731 19404157 19602731 - transcript336.chr8.nic@CSGALNACT1 transcript336.chr8.nic protein_coding 19601992,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404157 19602731,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069 Gene ID= ENSG00000147408.14 TPM= 20.08 Transcript Type= NA chr8 19404157 19757125 19404157 19757125 - transcript337.chr8.nnic@CSGALNACT1 transcript337.chr8.nnic protein_coding 19756939,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404157 19757125,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069 Gene ID= ENSG00000147408.14 TPM= 11.93 Transcript Type= NA chr8 19404157 19757830 19404157 19757830 - transcript338.chr8.nic@CSGALNACT1 transcript338.chr8.nic protein_coding 19757186,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404157 19757830,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069 Gene ID= ENSG00000147408.14 TPM= 54.49 Transcript Type= NA chr8 19404157 19757950 19404157 19757950 - transcript340.chr8.nic@CSGALNACT1 transcript340.chr8.nic protein_coding 19757850,19601771,19505201,19458426,19439830,19420340,19418656,19408613,19404157 19757950,19601865,19506130,19458642,19439931,19420518,19418750,19408694,19406069 Gene ID= ENSG00000147408.14 TPM= 32.75 Transcript Type= NA chr8 19817140 19852078 19817140 19852078 + ENST00000397977.7@INTS10 ENST00000397977.7 protein_coding 19817140,19818275,19819573,19820379,19822439,19823301,19823873,19824803,19826426,19830406,19832028,19833169,19837052,19842848,19844076,19845704,19851649 19817666,19818342,19819676,19820518,19822520,19823441,19824044,19824972,19826559,19830559,19832110,19833321,19837160,19842927,19844238,19845797,19852078 Gene ID= ENSG00000104613.11 TPM= 75.91 Transcript Type= protein_coding chr8 19817439 19824492 19817439 19824492 + transcript358.chr8.nic@INTS10 transcript358.chr8.nic protein_coding 19817439,19818275,19819573,19820379,19822439,19823301,19823873 19817666,19818342,19819676,19820518,19822520,19823441,19824492 Gene ID= ENSG00000104613.11 TPM= 4.53 Transcript Type= NA chr8 19938971 19967258 19938971 19967258 + ENST00000311322.8@LPL ENST00000311322.8 protein_coding 19938971,19948180,19951769,19953310,19954120,19955841,19959260,19960901,19962115,19965310 19939528,19948340,19951948,19953421,19954353,19956083,19959380,19961083,19962219,19967258 Gene ID= ENSG00000175445.14 TPM= 9.96 Transcript Type= protein_coding chr8 20197367 20221701 20197367 20221701 + ENST00000276390.6@ATP6V1B2 ENST00000276390.6 protein_coding 20197367,20204484,20209433,20210346,20210569,20211177,20211652,20212102,20212782,20214818,20216413,20217220,20218153,20220263 20197542,20204539,20209531,20210439,20210646,20211316,20211753,20212199,20212905,20214968,20216495,20217324,20218282,20221701 Gene ID= ENSG00000147416.10 TPM= 277.1 Transcript Type= protein_coding chr8 20246165 20303963 20246165 20303963 - ENST00000381569.5@LZTS1 ENST00000381569.5 protein_coding 20303740,20254837,20252782,20246165 20303963,20255315,20253585,20250363 Gene ID= ENSG00000061337.15 TPM= 2.72 Transcript Type= protein_coding chr8 21908873 21913860 21908873 21913860 - ENST00000276420.8@DOK2 ENST00000276420.8 protein_coding 21913539,21912229,21911901,21910673,21908873 21913860,21912510,21911988,21910857,21909931 Gene ID= ENSG00000147443.12 TPM= 19.02 Transcript Type= protein_coding chr8 21908874 21913690 21908874 21913690 - transcript368.chr8.nnic@DOK2 transcript368.chr8.nnic protein_coding 21913539,21912229,21911901,21910673,21908874 21913690,21912617,21911988,21910857,21909931 Gene ID= ENSG00000147443.12 TPM= 7.24 Transcript Type= NA chr8 22024111 22036902 22024111 22036902 + transcript375.chr8.nic@NPM2 transcript375.chr8.nic protein_coding 22024111,22024724,22025216,22025436,22025647,22033130,22034109,22034510,22036493,22036638 22024623,22025049,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036902 Gene ID= ENSG00000158806.13 TPM= 13.13 Transcript Type= NA chr8 22024114 22036902 22024114 22036902 + transcript377.chr8.nic@NPM2 transcript377.chr8.nic protein_coding 22024114,22024724,22025216,22025436,22025647,22033130,22034109,22034510,22036493,22036638 22024257,22025049,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036902 Gene ID= ENSG00000158806.13 TPM= 4.07 Transcript Type= NA chr8 22024111 22036902 22024111 22036902 + transcript381.chr8.nic@NPM2 transcript381.chr8.nic protein_coding 22024111,22024724,22025436,22025647,22033130,22034109,22034510,22036358,22036638 22024623,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036902 Gene ID= ENSG00000158806.13 TPM= 1.81 Transcript Type= NA chr8 22024125 22036863 22024125 22036863 + ENST00000521157.5@NPM2 ENST00000521157.5 protein_coding 22024125,22024724,22025436,22025647,22033130,22034109,22034510,22036493,22036638 22024257,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036863 Gene ID= ENSG00000158806.13 TPM= 1.81 Transcript Type= protein_coding chr8 22024134 22036896 22024134 22036896 + ENST00000397940.5@NPM2 ENST00000397940.5 protein_coding 22024134,22024724,22025436,22025647,22033130,22034109,22034510,22036493,22036638 22024623,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036896 Gene ID= ENSG00000158806.13 TPM= 4.98 Transcript Type= protein_coding chr8 22024843 22036897 22024843 22036897 + ENST00000289820.10@NPM2 ENST00000289820.10 protein_coding 22024843,22025216,22025436,22025647,22033130,22034109,22034510,22036493,22036638 22025049,22025306,22025521,22025772,22033223,22034275,22034544,22036526,22036897 Gene ID= ENSG00000158806.13 TPM= 2.26 Transcript Type= protein_coding chr8 22048893 22082525 22048893 22082525 + transcript391.chr8.nic@DMTN transcript391.chr8.nic protein_coding 22048893,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350 22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 26.8 Transcript Type= NA chr8 22048901 22082525 22048901 22082525 + transcript392.chr8.nic@DMTN transcript392.chr8.nic protein_coding 22048901,22066838,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080795,22080802,22081113,22081350 22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080799,22080870,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 11.41 Transcript Type= NA chr8 22048893 22082525 22048893 22082525 + transcript393.chr8.nic@DMTN transcript393.chr8.nic protein_coding 22048893,22066705,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350 22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 14.15 Transcript Type= NA chr8 22048901 22082525 22048901 22082525 + transcript395.chr8.nic@DMTN transcript395.chr8.nic protein_coding 22048901,22066838,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350 22049224,22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 10.53 Transcript Type= NA chr8 22066500 22082525 22066500 22082525 + transcript398.chr8.nic@DMTN transcript398.chr8.nic protein_coding 22066500,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22080805,22081113,22081350 22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22080870,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 8.69 Transcript Type= NA chr8 22048893 22082525 22048893 22082525 + transcript399.chr8.nic@DMTN transcript399.chr8.nic protein_coding 22048893,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350 22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 17.78 Transcript Type= NA chr8 22048974 22082525 22048974 22082525 + transcript400.chr8.nnic@DMTN transcript400.chr8.nnic protein_coding 22048974,22066705,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080805,22081113,22081350 22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080870,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 5.07 Transcript Type= NA chr8 22048963 22082525 22048963 22082525 + transcript402.chr8.nic@DMTN transcript402.chr8.nic protein_coding 22048963,22066838,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350 22049224,22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 6.91 Transcript Type= NA chr8 22066500 22082525 22066500 22082525 + transcript405.chr8.nic@DMTN transcript405.chr8.nic protein_coding 22066500,22067085,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350 22066893,22067159,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 6 Transcript Type= NA chr8 22066495 22082525 22066495 22082525 + transcript409.chr8.nic@DMTN transcript409.chr8.nic protein_coding 22066495,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080618,22081113,22081350 22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080625,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 5.1 Transcript Type= NA chr8 22066495 22082525 22066495 22082525 + transcript410.chr8.nnic@DMTN transcript410.chr8.nnic protein_coding 22066495,22067527,22069016,22069419,22069881,22070182,22072326,22073730,22080180,22080412,22080805,22081113,22081350 22066893,22067682,22069060,22069518,22069937,22070334,22072450,22073835,22080244,22080460,22080870,22081193,22082525 Gene ID= ENSG00000158856.18 TPM= 3.26 Transcript Type= NA chr8 22106872 22109397 22106872 22109397 - ENST00000611621.1@NUDT18 ENST00000611621.1 protein_coding 22109139,22108133,22106872 22109397,22108346,22107895 Gene ID= ENSG00000275074.1 TPM= 9.96 Transcript Type= protein_coding chr8 22138020 22141951 22138020 22141951 - ENST00000306306.7@REEP4 ENST00000306306.7 protein_coding 22141451,22140625,22140172,22139963,22139416,22138926,22138639,22138020 22141951,22140697,22140248,22140083,22139529,22139061,22138793,22138552 Gene ID= ENSG00000168476.11 TPM= 19.02 Transcript Type= protein_coding chr8 22146825 22156832 22146825 22156832 - ENST00000306317.6@LGI3 ENST00000306317.6 protein_coding 22156337,22155392,22154560,22154142,22153968,22151831,22151489,22146825 22156832,22155463,22154631,22154213,22154039,22152000,22151653,22148977 Gene ID= ENSG00000168481.8 TPM= 1.81 Transcript Type= protein_coding chr8 22165152 22212328 22165152 22212328 + transcript433.chr8.nnic@BMP1 transcript433.chr8.nnic protein_coding 22165152,22173602,22176143,22176533,22176961,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201118,22201803,22206854,22207303,22209445,22211594 22165553,22173715,22176313,22176650,22177139,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201535,22201928,22206981,22207516,22209695,22212328 Gene ID= ENSG00000168487.17 TPM= 10.41 Transcript Type= NA chr8 22165152 22212328 22165152 22212328 + transcript439.chr8.nic@BMP1 transcript439.chr8.nic protein_coding 22165152,22173602,22176143,22176533,22176961,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201118,22206854,22207303,22209445,22211594 22165553,22173715,22176313,22176650,22177139,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201928,22206981,22207516,22209695,22212328 Gene ID= ENSG00000168487.17 TPM= 16.3 Transcript Type= NA chr8 22164736 22212326 22164736 22212326 + ENST00000306385.9@BMP1 ENST00000306385.9 protein_coding 22164736,22173602,22176143,22176533,22176961,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201803,22206854,22207303,22209445,22211594 22165553,22173715,22176313,22176650,22177139,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201928,22206981,22207516,22209695,22212326 Gene ID= ENSG00000168487.17 TPM= 104.66 Transcript Type= protein_coding chr8 22165252 22201482 22165252 22201482 + ENST00000306349.12@BMP1 ENST00000306349.12 protein_coding 22165252,22173602,22176143,22176533,22176961,22177852,22179705,22180368,22192049,22194058,22194445,22194724,22195462,22196680,22197240,22201118 22165553,22173715,22176313,22176650,22177139,22177957,22179829,22180483,22192151,22194174,22194590,22194919,22195587,22196840,22197420,22201482 Gene ID= ENSG00000168487.17 TPM= 9.89 Transcript Type= protein_coding chr8 22219704 22225694 22219704 22225694 - transcript450.chr8.nnic@PHYHIP transcript450.chr8.nnic protein_coding 22224444,22224226,22219704 22225694,22224345,22221887 Gene ID= ENSG00000168490.13 TPM= 15.39 Transcript Type= NA chr8 22245235 22254600 22245235 22254600 + ENST00000397802.8@POLR3D ENST00000397802.8 protein_coding 22245235,22247221,22247857,22248154,22248481,22249044,22250075,22250396 22245614,22247264,22248008,22248278,22248649,22249309,22250227,22254600 Gene ID= ENSG00000168495.12 TPM= 7.24 Transcript Type= protein_coding chr8 22245104 22251167 22245104 22251167 + ENST00000306433.8@POLR3D ENST00000306433.8 protein_coding 22245104,22245445,22247221,22247857,22248154,22248481,22249044,22250075,22250396 22245183,22245614,22247264,22248008,22248278,22248649,22249309,22250227,22251167 Gene ID= ENSG00000168495.12 TPM= 9.06 Transcript Type= protein_coding chr8 22367077 22422683 22367077 22422683 + transcript462.chr8.nnic@SLC39A14 transcript462.chr8.nnic protein_coding 22367077,22390730,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552 22367408,22390847,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422683 Gene ID= ENSG00000104635.13 TPM= 23.77 Transcript Type= NA chr8 22367305 22422741 22367305 22422741 + ENST00000381237.5@SLC39A14 ENST00000381237.5 protein_coding 22367305,22404696,22408310,22412037,22414780,22415769,22416073,22417651,22419552 22367408,22404980,22408496,22412206,22414902,22415957,22416280,22417835,22422741 Gene ID= ENSG00000104635.13 TPM= 429.45 Transcript Type= protein_coding chr8 22440819 22522813 22440819 22522813 + ENST00000518852.5@PPP3CC ENST00000518852.5 protein_coding 22440819,22474954,22475500,22498001,22511086,22513293,22522491,22522655 22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522813 Gene ID= ENSG00000120910.14 TPM= 4.53 Transcript Type= protein_coding chr8 22441083 22541125 22441083 22541125 + ENST00000240139.9@PPP3CC ENST00000240139.9 protein_coding 22441083,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22532225,22532921,22539469,22540615 22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22532306,22533018,22539498,22541125 Gene ID= ENSG00000120910.14 TPM= 3.62 Transcript Type= protein_coding chr8 22441124 22541142 22441124 22541142 + ENST00000289963.12@PPP3CC ENST00000289963.12 protein_coding 22441124,22474954,22475500,22498001,22511086,22513293,22522491,22522655,22527392,22528506,22532225,22532921,22540615 22441458,22475151,22475624,22498112,22511231,22513432,22522568,22522749,22527517,22528577,22532306,22533018,22541142 Gene ID= ENSG00000120910.14 TPM= 7.24 Transcript Type= protein_coding chr8 22551553 22575500 22551553 22575500 + transcript488.chr8.nic@SORBS3 transcript488.chr8.nic protein_coding 22551553,22554452,22554908,22556715,22558129,22561335,22561865,22563987,22564283,22564468,22565268,22565826,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667 22552022,22554608,22554980,22556908,22558192,22561373,22561931,22564077,22564369,22564521,22565354,22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575500 Gene ID= ENSG00000120896.13 TPM= 7.02 Transcript Type= NA chr8 22565933 22575500 22565933 22575500 + transcript496.chr8.nic@SORBS3 transcript496.chr8.nic protein_coding 22565933,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667 22566243,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575500 Gene ID= ENSG00000120896.13 TPM= 8.83 Transcript Type= NA chr8 22565956 22575500 22565956 22575500 + transcript497.chr8.nnic@SORBS3 transcript497.chr8.nnic protein_coding 22565956,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667 22566193,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575500 Gene ID= ENSG00000120896.13 TPM= 12.45 Transcript Type= NA chr8 22565453 22575500 22565453 22575500 + transcript500.chr8.nic@SORBS3 transcript500.chr8.nic protein_coding 22565453,22566345,22566661,22567061,22569148,22570910,22571718,22572340,22574667 22565872,22566484,22566868,22567175,22569273,22571221,22571821,22572446,22575500 Gene ID= ENSG00000120896.13 TPM= 4.98 Transcript Type= NA chr8 22565753 22575500 22565753 22575500 + transcript501.chr8.nic@SORBS3 transcript501.chr8.nic protein_coding 22565753,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667 22565872,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575500 Gene ID= ENSG00000120896.13 TPM= 4.07 Transcript Type= NA chr8 22565678 22575495 22565678 22575495 + ENST00000523965.5@SORBS3 ENST00000523965.5 protein_coding 22565678,22566345,22566661,22566822,22567061,22569148,22570910,22571718,22572340,22574667 22565872,22566484,22566713,22566868,22567175,22569273,22571221,22571821,22572446,22575495 Gene ID= ENSG00000120896.13 TPM= 38.71 Transcript Type= protein_coding chr8 22579150 22594265 22579150 22594265 + ENST00000397761.6@PDLIM2 ENST00000397761.6 protein_coding 22579150,22580603,22581379,22584821,22585017,22585321,22589298,22589596,22591551,22593733 22579224,22580697,22581530,22584890,22585162,22585399,22589374,22589741,22591668,22594265 Gene ID= ENSG00000120913.23 TPM= 5.43 Transcript Type= protein_coding chr8 22599601 22604150 22599601 22604150 + ENST00000614574.4@C8orf58 ENST00000614574.4 protein_coding 22599601,22600882,22601712,22601972,22602200,22603195 22599760,22601357,22601852,22602080,22602312,22604150 Gene ID= ENSG00000241852.9 TPM= 10.26 Transcript Type= protein_coding chr8 22599601 22604133 22599601 22604133 + ENST00000409586.7@C8orf58 ENST00000409586.7 protein_coding 22599601,22600882,22601712,22601972,22602200,22602561,22603195 22599760,22601357,22601852,22602080,22602312,22602643,22604133 Gene ID= ENSG00000241852.9 TPM= 5.73 Transcript Type= protein_coding chr8 22599647 22604150 22599647 22604150 + ENST00000289989.9@C8orf58 ENST00000289989.9 protein_coding 22599647,22600882,22601712,22601972,22602200,22602537,22603195 22599760,22601357,22601852,22602080,22602312,22602643,22604150 Gene ID= ENSG00000241852.9 TPM= 10.26 Transcript Type= protein_coding chr8 22604632 22621514 22604632 22621514 + ENST00000308511.8@CCAR2 ENST00000308511.8 protein_coding 22604632,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638 22604842,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22621514 Gene ID= ENSG00000158941.16 TPM= 124.21 Transcript Type= protein_coding chr8 22605038 22620471 22605038 22620471 + ENST00000389279.7@CCAR2 ENST00000389279.7 protein_coding 22605038,22605736,22606085,22606607,22606910,22607196,22607969,22613017,22614092,22614390,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638 22605418,22605831,22606176,22606698,22607024,22607325,22608065,22613136,22614314,22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22620471 Gene ID= ENSG00000158941.16 TPM= 37.28 Transcript Type= protein_coding chr8 22614388 22620468 22614388 22620468 + ENST00000520738.5@CCAR2 ENST00000520738.5 protein_coding 22614388,22614838,22615425,22615682,22616012,22617420,22617696,22618349,22618617,22618827,22619150,22619638 22614503,22615001,22615596,22615912,22616248,22617564,22617778,22618495,22618728,22619015,22619355,22620468 Gene ID= ENSG00000158941.16 TPM= 4.23 Transcript Type= protein_coding chr8 22620715 22669138 22620715 22669138 - transcript532.chr8.nic@BIN3 transcript532.chr8.nic protein_coding 22669044,22644755,22636922,22636525,22630442,22629964,22624222,22623915,22622541,22620715 22669138,22644803,22636962,22636586,22630578,22630004,22624363,22624049,22622697,22621568 Gene ID= ENSG00000147439.12 TPM= 1.81 Transcript Type= NA chr8 22620418 22669120 22620418 22669120 - ENST00000276416.10@BIN3 ENST00000276416.10 protein_coding 22669044,22644755,22636922,22636525,22630442,22629964,22624222,22623915,22620418 22669120,22644803,22636962,22636586,22630578,22630004,22624363,22624049,22621568 Gene ID= ENSG00000147439.12 TPM= 68.82 Transcript Type= protein_coding chr8 23006381 23019335 23006381 23019335 - ENST00000502083.2@AC107959.1 ENST00000502083.2 antisense_RNA 23019128,23006381 23019335,23008117 Gene ID= ENSG00000245025.2 TPM= 5.43 Transcript Type= antisense_RNA chr8 22999579 23020199 22999579 23020199 + ENST00000251822.6@RHOBTB2 ENST00000251822.6 protein_coding 22999579,23004425,23005372,23005960,23006728,23007993,23010538,23014690,23015638,23017252 23000105,23004626,23005475,23006145,23007746,23008111,23010688,23014778,23015743,23020199 Gene ID= ENSG00000008853.16 TPM= 36.22 Transcript Type= protein_coding chr8 23020138 23069031 23020138 23069031 - transcript547.chr8.nnic@TNFRSF10B transcript547.chr8.nnic protein_coding 23068751,23043138,23030759,23029610,23028529,23028331,23027722,23027133,23024188,23020138 23069031,23043243,23030872,23029721,23028602,23028441,23027753,23027288,23024260,23022954 Gene ID= ENSG00000120889.12 TPM= 4.53 Transcript Type= NA chr8 23020133 23069179 23020133 23069179 - ENST00000276431.8@TNFRSF10B ENST00000276431.8 protein_coding 23068751,23043138,23030759,23029610,23028331,23027722,23027133,23024188,23020133 23069179,23043243,23030872,23029721,23028602,23027753,23027288,23024260,23022984 Gene ID= ENSG00000120889.12 TPM= 40.45 Transcript Type= protein_coding chr8 23020136 23069031 23020136 23069031 - transcript550.chr8.nic@TNFRSF10B transcript550.chr8.nic protein_coding 23068751,23030759,23029610,23028331,23027722,23027133,23024188,23020136 23069031,23030872,23029721,23028602,23027753,23027288,23024260,23022984 Gene ID= ENSG00000120889.12 TPM= 5.13 Transcript Type= NA chr8 23020136 23069031 23020136 23069031 - transcript551.chr8.nic@TNFRSF10B transcript551.chr8.nic protein_coding 23068751,23043138,23029610,23028331,23027722,23027133,23024188,23020136 23069031,23043243,23030872,23028602,23027753,23027288,23024260,23022984 Gene ID= ENSG00000120889.12 TPM= 5.13 Transcript Type= NA chr8 23084355 23103558 23084355 23103558 + ENST00000397703.6@TNFRSF10C ENST00000397703.6 protein_coding 23084355,23090148,23100637,23102697 23084545,23090288,23100684,23103558 Gene ID= ENSG00000173535.13 TPM= 2.72 Transcript Type= protein_coding chr8 23135588 23164030 23135588 23164030 - ENST00000312584.3@TNFRSF10D ENST00000312584.3 protein_coding 23163786,23154874,23148438,23146961,23145668,23145058,23144450,23138188,23135588 23164030,23154979,23148551,23147072,23145921,23145089,23144635,23138260,23138003 Gene ID= ENSG00000173530.5 TPM= 3.62 Transcript Type= protein_coding chr8 23246612 23262001 23246612 23262001 + transcript567.chr8.nic@CHMP7 transcript567.chr8.nic protein_coding 23246612,23249210,23255247,23256460,23258033,23258330,23258732,23260144,23260538 23246994,23249381,23255432,23256593,23258081,23258449,23258830,23260323,23262001 Gene ID= ENSG00000147457.13 TPM= 5.43 Transcript Type= NA chr8 23243637 23261992 23243637 23261992 + ENST00000397677.5@CHMP7 ENST00000397677.5 protein_coding 23243637,23246256,23249210,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538 23243844,23246994,23249381,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992 Gene ID= ENSG00000147457.13 TPM= 131.76 Transcript Type= protein_coding chr8 23246642 23261992 23246642 23261992 + ENST00000517325.5@CHMP7 ENST00000517325.5 protein_coding 23246642,23249210,23255247,23256460,23258033,23258330,23258732,23259066,23260144,23260538 23246824,23249381,23255432,23256593,23258081,23258449,23258830,23259126,23260323,23261992 Gene ID= ENSG00000147457.13 TPM= 6.79 Transcript Type= nonsense_mediated_decay chr8 23288089 23296278 23288089 23296278 + transcript578.chr8.nnic@R3HCC1 transcript578.chr8.nnic protein_coding 23288089,23288506,23289016,23289866,23291361,23293303,23294769,23295967 23288157,23288633,23289153,23290511,23291533,23293373,23294864,23296278 Gene ID= ENSG00000104679.10 TPM= 3.62 Transcript Type= NA chr8 23288089 23296278 23288089 23296278 + transcript579.chr8.nic@R3HCC1 transcript579.chr8.nic protein_coding 23288089,23288506,23289043,23289866,23291361,23293303,23294769,23295967 23288157,23288633,23289153,23290469,23291533,23293373,23294864,23296278 Gene ID= ENSG00000104679.10 TPM= 3.62 Transcript Type= NA chr8 23297182 23404158 23297182 23404158 - transcript571.chr8.nic@LOXL2 transcript571.chr8.nic protein_coding 23403954,23367997,23360090,23340992,23333401,23328382,23322130,23319885,23316949,23309668,23303282,23302027,23298836,23297182 23404158,23368434,23360265,23341203,23333623,23328586,23322281,23320052,23317114,23309911,23303397,23302163,23298947,23298122 Gene ID= ENSG00000134013.15 TPM= 7.24 Transcript Type= NA chr8 23435933 23457710 23435933 23457710 - transcript587.chr8.nic@ENTPD4 transcript587.chr8.nic protein_coding 23457557,23449893,23448742,23447680,23444456,23443850,23442007,23441569,23439749,23435933 23457710,23449997,23448939,23447885,23444606,23443953,23442066,23441723,23439915,23437258 Gene ID= ENSG00000197217.12 TPM= 1.81 Transcript Type= NA chr8 23429152 23457695 23429152 23457695 - ENST00000358689.8@ENTPD4 ENST00000358689.8 protein_coding 23457557,23449893,23448742,23447680,23444456,23443850,23442007,23441569,23439749,23436934,23435392,23434317,23429152 23457695,23449997,23448939,23447885,23444606,23443953,23442066,23441723,23439915,23437258,23435477,23434478,23433154 Gene ID= ENSG00000197217.12 TPM= 16.3 Transcript Type= protein_coding chr8 23528805 23575463 23528805 23575463 + ENST00000519973.5@SLC25A37 ENST00000519973.5 protein_coding 23528805,23566108,23568322,23571335 23529212,23566336,23568378,23575463 Gene ID= ENSG00000147454.13 TPM= 13.58 Transcript Type= protein_coding chr8 23528956 23575461 23528956 23575461 + transcript595.chr8.nnic@SLC25A37 transcript595.chr8.nnic protein_coding 23528956,23566108,23568322,23571335 23529212,23566913,23568378,23575461 Gene ID= ENSG00000147454.13 TPM= 12.68 Transcript Type= NA chr8 23528975 23531925 23528975 23531925 + ENST00000519192.1@SLC25A37 ENST00000519192.1 protein_coding 23528975,23531685 23529212,23531925 Gene ID= ENSG00000147454.13 TPM= 7.24 Transcript Type= processed_transcript chr8 23528956 23572203 23528956 23572203 + ENST00000290075.10@SLC25A37 ENST00000290075.10 protein_coding 23528956,23566108,23568322,23571335 23529212,23566813,23568378,23572203 Gene ID= ENSG00000147454.13 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr8 23841915 23854807 23841915 23854807 - ENST00000290271.6@STC1 ENST00000290271.6 protein_coding 23854406,23852242,23851320,23841915 23854807,23852384,23851531,23845040 Gene ID= ENSG00000159167.11 TPM= 1.81 Transcript Type= protein_coding chr8 24294040 24359018 24294040 24359018 + ENST00000265769.8@ADAM28 ENST00000265769.8 protein_coding 24294040,24299974,24309894,24310163,24311361,24313388,24320236,24321218,24323834,24326554,24329985,24331150,24332660,24335446,24339466,24341598,24343101,24343506,24349864,24351232,24351987,24353770,24354384 24294195,24300077,24309970,24310241,24311437,24313580,24320307,24321289,24324003,24326635,24330115,24331327,24332749,24335641,24339568,24341757,24343181,24343584,24349972,24351310,24352052,24353832,24359018 Gene ID= ENSG00000042980.12 TPM= 1.81 Transcript Type= protein_coding chr8 24384285 24406013 24384285 24406013 + ENST00000256412.8@ADAMDEC1 ENST00000256412.8 protein_coding 24384285,24392262,24393262,24394069,24395720,24397270,24397683,24398480,24398874,24399393,24400170,24401915,24404003,24405292 24384592,24392380,24393338,24394147,24395796,24397456,24397745,24398551,24399040,24399474,24400300,24402092,24404088,24406013 Gene ID= ENSG00000134028.14 TPM= 1.81 Transcript Type= protein_coding chr8 24913012 24919093 24913012 24919093 + ENST00000221166.9@NEFM ENST00000221166.9 protein_coding 24913012,24915605,24917061 24914873,24915729,24919093 Gene ID= ENSG00000104722.13 TPM= 19.92 Transcript Type= protein_coding chr8 24950955 24957110 24950955 24957110 - ENST00000610854.1@NEFL ENST00000610854.1 protein_coding 24955472,24954181,24953476,24950955 24957110,24954305,24953795,24952952 Gene ID= ENSG00000277586.2 TPM= 1.81 Transcript Type= protein_coding chr8 25427847 25458467 25427847 25458467 - ENST00000221200.8@KCTD9 ENST00000221200.8 protein_coding 25458199,25446129,25444292,25440577,25439606,25439279,25436418,25436235,25435363,25433330,25432504,25427847 25458467,25446250,25444335,25440673,25439664,25439407,25436485,25436330,25435512,25433435,25432637,25429973 Gene ID= ENSG00000104756.15 TPM= 3.62 Transcript Type= protein_coding chr8 26291507 26372676 26291507 26372676 + transcript618.chr8.nic@PPP2R2A transcript618.chr8.nic protein_coding 26291507,26293666,26333486,26338890,26354468,26360169,26360974,26362684,26363721,26366315,26370134 26291826,26293740,26333570,26338987,26354633,26360281,26361151,26362848,26363890,26366406,26372676 Gene ID= ENSG00000221914.9 TPM= 2.72 Transcript Type= NA chr8 26291491 26372680 26291491 26372680 + ENST00000380737.7@PPP2R2A ENST00000380737.7 protein_coding 26291491,26293666,26338890,26354468,26360169,26360974,26362684,26363721,26366315,26370134 26291826,26293740,26338987,26354633,26360281,26361151,26362848,26363890,26366406,26372680 Gene ID= ENSG00000221914.9 TPM= 14.49 Transcript Type= protein_coding chr8 26382898 26413129 26382898 26413129 + ENST00000380629.6@BNIP3L ENST00000380629.6 protein_coding 26382898,26391243,26395230,26408000,26408227,26410364 26383230,26391426,26395302,26408103,26408376,26413129 Gene ID= ENSG00000104765.15 TPM= 325.54 Transcript Type= protein_coding chr8 26383056 26500393 26383056 26500393 + transcript632.chr8.nnic@BNIP3L transcript632.chr8.nnic protein_coding 26383056,26391243,26395230,26408000,26408227,26498675 26383230,26391426,26395302,26408103,26408376,26500393 Gene ID= ENSG00000104765.15 TPM= 1.81 Transcript Type= NA chr8 26504686 26514092 26504686 26514092 - ENST00000522362.6@PNMA2 ENST00000522362.6 protein_coding 26513816,26509548,26504686 26514092,26509677,26509243 Gene ID= ENSG00000240694.8 TPM= 1.81 Transcript Type= protein_coding chr8 27284887 27311319 27284887 27311319 - ENST00000305364.8@TRIM35 ENST00000305364.8 protein_coding 27310801,27298464,27294080,27290156,27289162,27284887 27311319,27298559,27294310,27290178,27289280,27288127 Gene ID= ENSG00000104228.12 TPM= 35.32 Transcript Type= protein_coding chr8 27311469 27459390 27311469 27459390 + transcript643.chr8.nic@PTK2B transcript643.chr8.nic protein_coding 27311469,27312304,27313205,27322402,27325564,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27431398,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27445794,27450749,27451043,27451485,27453114,27454154,27454531,27458294 27311709,27312387,27313287,27322499,27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431016,27431472,27432361,27433552,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27445919,27450895,27451078,27451509,27453160,27454291,27454611,27459390 Gene ID= ENSG00000120899.17 TPM= 8.15 Transcript Type= NA chr8 27311469 27459390 27311469 27459390 + transcript644.chr8.nic@PTK2B transcript644.chr8.nic protein_coding 27311469,27312304,27313205,27322402,27325564,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27445794,27450749,27451043,27451485,27453114,27454154,27454531,27458294 27311709,27312387,27313287,27322499,27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431472,27432361,27433513,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27445919,27450895,27451078,27451509,27453160,27454291,27454611,27459390 Gene ID= ENSG00000120899.17 TPM= 2.72 Transcript Type= NA chr8 27325479 27459386 27325479 27459386 + ENST00000346049.9@PTK2B ENST00000346049.9 protein_coding 27325479,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27431398,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27445794,27450749,27451043,27451485,27453114,27454154,27454531,27458294 27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431016,27431472,27432361,27433552,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27445919,27450895,27451078,27451509,27453160,27454291,27454611,27459386 Gene ID= ENSG00000120899.17 TPM= 2.72 Transcript Type= protein_coding chr8 27311482 27459390 27311482 27459390 + ENST00000397501.5@PTK2B ENST00000397501.5 protein_coding 27311482,27312304,27313205,27322402,27323267,27325564,27397548,27419895,27420657,27422304,27430093,27430364,27430876,27431398,27432260,27433435,27434093,27434513,27435743,27436251,27437122,27437396,27437765,27439031,27439309,27440237,27442875,27444206,27445794,27450749,27451043,27451485,27453114,27454154,27454531,27458294 27311709,27312387,27313287,27322499,27323426,27325681,27397788,27420073,27420744,27422383,27430155,27430418,27431016,27431472,27432361,27433552,27434132,27434559,27435793,27436348,27437206,27437496,27437880,27439131,27439398,27440441,27442983,27444271,27445919,27450895,27451078,27451509,27453160,27454291,27454611,27459390 Gene ID= ENSG00000120899.17 TPM= 3.62 Transcript Type= protein_coding chr8 27490779 27545564 27490779 27545564 + ENST00000521400.5@EPHX2 ENST00000521400.5 protein_coding 27490779,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444 27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538692,27540656,27541542,27543829,27544244,27545564 Gene ID= ENSG00000120915.13 TPM= 421.56 Transcript Type= protein_coding chr8 27490777 27544923 27490777 27544923 + transcript659.chr8.nnic@EPHX2 transcript659.chr8.nnic protein_coding 27490777,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749,27544186,27544444 27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538743,27540656,27541542,27543829,27544244,27544923 Gene ID= ENSG00000120915.13 TPM= 11.35 Transcript Type= NA chr8 27491109 27544922 27491109 27544922 + transcript668.chr8.nic@EPHX2 transcript668.chr8.nic protein_coding 27491109,27500926,27503604,27504956,27506872,27511836,27515718,27516320,27518038,27520883,27522423,27525362,27536784,27538659,27540554,27541473,27543749 27491309,27501010,27503763,27505146,27506994,27511910,27515813,27516398,27518072,27520909,27522508,27525473,27536855,27538692,27540656,27541542,27544922 Gene ID= ENSG00000120915.13 TPM= 20.1 Transcript Type= NA chr8 27596917 27615031 27596917 27615031 - ENST00000316403.14@CLU ENST00000316403.14 protein_coding 27614655,27610475,27608938,27606354,27604924,27604291,27599780,27598460,27596917 27615031,27610600,27609086,27606524,27605335,27604395,27600009,27598635,27598250 Gene ID= ENSG00000120885.21 TPM= 5690.9 Transcript Type= protein_coding chr8 27597996 27614693 27597996 27614693 - ENST00000522299.5@CLU ENST00000522299.5 protein_coding 27614655,27610475,27608938,27606354,27604924,27604291,27598460,27597996 27614693,27610600,27609086,27606524,27605335,27604395,27600009,27598250 Gene ID= ENSG00000120885.21 TPM= 11.77 Transcript Type= retained_intron chr8 27633868 27676776 27633868 27676776 + ENST00000337221.8@SCARA3 ENST00000337221.8 protein_coding 27633868,27649702,27651508,27656782,27658496,27676569 27634207,27649800,27651627,27656880,27659539,27676776 Gene ID= ENSG00000168077.13 TPM= 2.72 Transcript Type= protein_coding chr8 27733318 27772653 27733318 27772653 - ENST00000520486.5@CCDC25 ENST00000520486.5 protein_coding 27772513,27765204,27762419,27752512,27748495,27748077,27740472,27733318 27772653,27765251,27762458,27752587,27748598,27748279,27740517,27736245 Gene ID= ENSG00000147419.17 TPM= 14.49 Transcript Type= nonsense_mediated_decay chr8 27733311 27772634 27733311 27772634 - ENST00000356537.8@CCDC25 ENST00000356537.8 protein_coding 27772513,27765204,27762419,27756719,27752512,27748495,27748077,27740472,27733311 27772634,27765251,27762458,27756770,27752587,27748598,27748279,27740517,27736245 Gene ID= ENSG00000147419.17 TPM= 94.18 Transcript Type= protein_coding chr8 27735052 27772639 27735052 27772639 - ENST00000520202.5@CCDC25 ENST00000520202.5 protein_coding 27772513,27765204,27762419,27752512,27748077,27740472,27735052 27772639,27765251,27762458,27752587,27748279,27740517,27736245 Gene ID= ENSG00000147419.17 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr8 27735862 27772640 27735862 27772640 - ENST00000519509.5@CCDC25 ENST00000519509.5 protein_coding 27772513,27765204,27762419,27756719,27752512,27748077,27740472,27735862 27772640,27765251,27762458,27756770,27752587,27748279,27740517,27736245 Gene ID= ENSG00000147419.17 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr8 27774386 27805316 27774386 27805316 + ENST00000305188.12@ESCO2 ENST00000305188.12 protein_coding 27774386,27775499,27776362,27780174,27784000,27787885,27788847,27791963,27792668,27799541,27803306 27774607,27775567,27777169,27780267,27784057,27788002,27788978,27792052,27792811,27799716,27805316 Gene ID= ENSG00000171320.14 TPM= 1.81 Transcript Type= protein_coding chr8 27869882 27992727 27869882 27992727 - ENST00000354914.7@SCARA5 ENST00000354914.7 protein_coding 27992257,27987504,27966414,27921571,27909663,27907148,27904778,27879569,27869882 27992727,27987630,27966542,27922245,27909743,27907246,27904834,27879766,27872070 Gene ID= ENSG00000168079.16 TPM= 2.72 Transcript Type= protein_coding chr8 28092827 28191150 28092827 28191150 + transcript708.chr8.nnic@ELP3 transcript708.chr8.nnic protein_coding 28092827,28097219,28099828,28106713,28107913,28110370,28113019,28126957,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28189649 28093233,28097318,28099966,28106783,28107976,28110438,28113173,28127070,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28191150 Gene ID= ENSG00000134014.16 TPM= 2.72 Transcript Type= NA chr8 28093119 28191149 28093119 28191149 + transcript709.chr8.nic@ELP3 transcript709.chr8.nic protein_coding 28093119,28097219,28099828,28106713,28107913,28110370,28113019,28129502,28132278,28137698,28155942,28158568,28160229,28161997,28183194,28189649 28093233,28097318,28099966,28106783,28107976,28110438,28113173,28129663,28132404,28137891,28156032,28158633,28160456,28162078,28183264,28191149 Gene ID= ENSG00000134014.16 TPM= 3.62 Transcript Type= NA chr8 28345591 28386320 28345591 28386320 - transcript714.chr8.nnic@ZNF395 transcript714.chr8.nnic protein_coding 28386004,28375262,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28345591 28386320,28375382,28361142,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830 Gene ID= ENSG00000186918.13 TPM= 9.73 Transcript Type= NA chr8 28345591 28386231 28345591 28386231 - transcript721.chr8.nic@ZNF395 transcript721.chr8.nic protein_coding 28386004,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28345591 28386231,28361182,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830 Gene ID= ENSG00000186918.13 TPM= 16.98 Transcript Type= NA chr8 28345585 28386466 28345585 28386466 - ENST00000344423.9@ZNF395 ENST00000344423.9 protein_coding 28386393,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28345585 28386466,28361182,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830 Gene ID= ENSG00000186918.13 TPM= 7.02 Transcript Type= protein_coding chr8 28345591 28386439 28345591 28386439 - transcript719.chr8.nnic@FBXO16 transcript719.chr8.nnic protein_coding 28386393,28360885,28359592,28356670,28353173,28352573,28351495,28350064,28349125,28345591 28386439,28361142,28359824,28356779,28353408,28352673,28351807,28350156,28349228,28348830 Gene ID= ENSG00000214050.7 TPM= 7.92 Transcript Type= NA chr8 28494205 28574267 28494205 28574267 + ENST00000537916.2@FZD3 ENST00000537916.2 protein_coding 28494205,28502670,28520638,28527147,28551603,28555738,28562798 28494343,28503202,28520834,28528164,28551751,28555971,28574267 Gene ID= ENSG00000104290.10 TPM= 4.53 Transcript Type= protein_coding chr8 28622750 28753689 28622750 28753689 + transcript733.chr8.nic@EXTL3 transcript733.chr8.nic protein_coding 28622750,28713457,28715585,28731223,28737519,28743086,28750657 28622810,28713550,28718207,28731350,28737663,28743214,28753689 Gene ID= ENSG00000012232.8 TPM= 21.73 Transcript Type= NA chr8 28701503 28753689 28701503 28753689 + transcript736.chr8.nnic@EXTL3 transcript736.chr8.nnic protein_coding 28701503,28715585,28731223,28737519,28743086,28750657 28701659,28718207,28731350,28737663,28743214,28753689 Gene ID= ENSG00000012232.8 TPM= 18.11 Transcript Type= NA chr8 28767661 28889964 28767661 28889964 - ENST00000521022.5@INTS9 ENST00000521022.5 protein_coding 28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793807,28787829,28780823,28777829,28775759,28770982,28769889,28767661 28889964,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987,28787889,28780994,28777953,28775926,28771080,28770026,28768322 Gene ID= ENSG00000104299.14 TPM= 57.05 Transcript Type= protein_coding chr8 28793729 28889921 28793729 28889921 - ENST00000520983.5@INTS9 ENST00000520983.5 protein_coding 28889874,28859436,28850213,28846747,28837637,28835292,28813492,28812327,28796544,28793729 28889921,28859563,28850273,28846809,28837776,28835378,28813612,28812461,28796655,28793987 Gene ID= ENSG00000104299.14 TPM= 3.62 Transcript Type= retained_intron chr8 28890373 29052096 28890373 29052096 + transcript751.chr8.nnic@HMBOX1 transcript751.chr8.nnic protein_coding 28890373,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29049290,29051018 28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29049394,29052096 Gene ID= ENSG00000147421.17 TPM= 2.72 Transcript Type= NA chr8 28890373 29052728 28890373 29052728 + transcript755.chr8.nic@HMBOX1 transcript755.chr8.nic protein_coding 28890373,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048957,29051018 28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29052728 Gene ID= ENSG00000147421.17 TPM= 2.56 Transcript Type= NA chr8 28891232 29051869 28891232 29051869 + transcript757.chr8.nic@HMBOX1 transcript757.chr8.nic protein_coding 28891232,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048957,29051018 28891484,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29051869 Gene ID= ENSG00000147421.17 TPM= 2.56 Transcript Type= NA chr8 28890394 29052734 28890394 29052734 + ENST00000287701.14@HMBOX1 ENST00000287701.14 protein_coding 28890394,28963811,28970043,28980071,29009072,29018760,29045361,29047358,29048954,29051018 28890678,28963890,28970519,28980156,29009182,29018913,29045443,29047453,29049048,29052734 Gene ID= ENSG00000147421.17 TPM= 5.73 Transcript Type= protein_coding chr8 29096320 29125332 29096320 29125332 - transcript761.chr8.nic@KIF13B transcript761.chr8.nic protein_coding 29123366,29122591,29118868,29116831,29113463,29109918,29109434,29108139,29096320 29125332,29122646,29118992,29117007,29113555,29110070,29109511,29108192,29099241 Gene ID= ENSG00000197892.12 TPM= 1.81 Transcript Type= NA chr8 29367945 29373358 29367945 29373358 - transcript764.chr8.nnic@NA transcript764.chr8.nnic NA 29373254,29372284,29367945 29373358,29372394,29368478 Gene ID= novel_gene_chr8_765 TPM= 1.81 Transcript Type= NA chr8 30063012 30083208 30063012 30083208 - ENST00000545648.2@SARAF ENST00000545648.2 protein_coding 30082847,30069642,30066777,30065988,30063012 30083208,30070059,30066918,30066139,30063913 Gene ID= ENSG00000133872.13 TPM= 90.55 Transcript Type= protein_coding chr8 30063098 30083124 30063098 30083124 - ENST00000518174.5@SARAF ENST00000518174.5 protein_coding 30082847,30073877,30069642,30066777,30065988,30063098 30083124,30074051,30070059,30066918,30066139,30063913 Gene ID= ENSG00000133872.13 TPM= 935.43 Transcript Type= nonsense_mediated_decay chr8 30156352 30183639 30156352 30183639 + transcript782.chr8.nnic@DCTN6 transcript782.chr8.nnic protein_coding 30156352,30175085,30177126,30179408,30180488,30183075 30156406,30175190,30177214,30179455,30180630,30183639 Gene ID= ENSG00000104671.7 TPM= 1.81 Transcript Type= NA chr8 30156297 30183640 30156297 30183640 + ENST00000221114.7@DCTN6 ENST00000221114.7 protein_coding 30156297,30164111,30175085,30177126,30179408,30180488,30183075 30156406,30164175,30175190,30177214,30179455,30180630,30183640 Gene ID= ENSG00000104671.7 TPM= 40.75 Transcript Type= protein_coding chr8 30385187 30572260 30385187 30572260 + transcript784.chr8.nic@RBPMS transcript784.chr8.nic protein_coding 30385187,30474779,30477799,30479315,30504286,30544494,30558887,30566257,30570637 30385390,30474856,30477837,30479377,30504436,30544624,30558956,30566360,30572260 Gene ID= ENSG00000157110.15 TPM= 3.32 Transcript Type= NA chr8 30384538 30572260 30384538 30572260 + transcript790.chr8.nnic@RBPMS transcript790.chr8.nnic protein_coding 30384538,30474779,30477799,30479315,30504286,30558887,30566257,30570637 30385158,30474856,30477837,30479377,30504436,30558956,30566360,30572260 Gene ID= ENSG00000157110.15 TPM= 4.23 Transcript Type= NA chr8 30384511 30547522 30384511 30547522 + ENST00000339877.8@RBPMS ENST00000339877.8 protein_coding 30384511,30474779,30477799,30479315,30504286,30544494,30547292 30385158,30474856,30477837,30479377,30504436,30544624,30547522 Gene ID= ENSG00000157110.15 TPM= 55.69 Transcript Type= protein_coding chr8 30384479 30572261 30384479 30572261 + ENST00000397323.8@RBPMS ENST00000397323.8 protein_coding 30384479,30474779,30477799,30479315,30504286,30544494,30558887,30566257,30570637 30385158,30474856,30477837,30479377,30504436,30544624,30558956,30566360,30572261 Gene ID= ENSG00000157110.15 TPM= 29.58 Transcript Type= protein_coding chr8 30385203 30547483 30385203 30547483 + ENST00000520161.5@RBPMS ENST00000520161.5 protein_coding 30385203,30474779,30477799,30479315,30504286,30544494,30547292 30385390,30474856,30477837,30479377,30504436,30544624,30547483 Gene ID= ENSG00000157110.15 TPM= 2.72 Transcript Type= protein_coding chr8 30578318 30658251 30578318 30658251 - ENST00000355904.8@GTF2E2 ENST00000355904.8 protein_coding 30657973,30653433,30635032,30614608,30612299,30607057,30580281,30578318 30658251,30653602,30635123,30614715,30612481,30607150,30580396,30579037 Gene ID= ENSG00000197265.8 TPM= 49.8 Transcript Type= protein_coding chr8 30678061 30727926 30678061 30727926 - ENST00000221130.9@GSR ENST00000221130.9 protein_coding 30727530,30712062,30709814,30708072,30703093,30700081,30696380,30692969,30689161,30684088,30681930,30680904,30678061 30727926,30712088,30709902,30708141,30703240,30700135,30696479,30693055,30689319,30684199,30682061,30681037,30679669 Gene ID= ENSG00000104687.12 TPM= 133.12 Transcript Type= protein_coding chr8 30744165 30767006 30744165 30767006 + ENST00000265616.9@UBXN8 ENST00000265616.9 protein_coding 30744165,30751396,30753035,30754665,30756765,30760888,30763273,30766227 30744277,30751518,30753105,30754787,30756887,30760929,30763347,30767006 Gene ID= ENSG00000104691.14 TPM= 18.11 Transcript Type= protein_coding chr8 30785610 30812872 30785610 30812872 - ENST00000221138.8@PPP2CB ENST00000221138.8 protein_coding 30812320,30799546,30797581,30794192,30793917,30791197,30785610 30812872,30799755,30797754,30794281,30794078,30791315,30786307 Gene ID= ENSG00000104695.12 TPM= 60.67 Transcript Type= protein_coding chr8 31033801 31173769 31033801 31173769 + ENST00000298139.5@WRN ENST00000298139.5 protein_coding 31033801,31058372,31059153,31064289,31064915,31067033,31068258,31076173,31080867,31083699,31085166,31087776,31088890,31090465,31090834,31091830,31096768,31100849,31111615,31116354,31120243,31124522,31124908,31132365,31141430,31141681,31142626,31143550,31147053,31147364,31150341,31154624,31157368,31167022,31172995 31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076287,31081296,31083779,31085246,31087920,31088965,31090532,31090942,31091898,31096850,31100955,31111799,31116528,31120424,31124623,31125000,31132506,31141600,31141775,31142701,31143623,31147128,31147476,31150455,31154755,31157530,31167230,31173769 Gene ID= ENSG00000165392.9 TPM= 6.34 Transcript Type= protein_coding chr8 31033772 31076608 31033772 31076608 + transcript834.chr8.nic@WRN transcript834.chr8.nic protein_coding 31033772,31058372,31059153,31064289,31064915,31067033,31068258,31076173 31033973,31058543,31059265,31064434,31065063,31067182,31068327,31076608 Gene ID= ENSG00000165392.9 TPM= 2.72 Transcript Type= NA chr8 33498509 33513185 33498509 33513185 - ENST00000613904.1@TTI2 ENST00000613904.1 protein_coding 33512960,33511967,33509746,33507229,33503748,33503429,33500328,33498509 33513185,33512712,33509932,33507321,33503935,33503572,33500490,33499277 Gene ID= ENSG00000129696.12 TPM= 1.36 Transcript Type= protein_coding chr8 33498965 33513150 33498965 33513150 - transcript842.chr8.nic@TTI2 transcript842.chr8.nic protein_coding 33513082,33511967,33509746,33503748,33503429,33500328,33498965 33513150,33512712,33509932,33503935,33503572,33500490,33499277 Gene ID= ENSG00000129696.12 TPM= 1.81 Transcript Type= NA chr8 33498954 33513109 33498954 33513109 - ENST00000360742.9@TTI2 ENST00000360742.9 protein_coding 33511967,33509746,33507229,33503748,33503429,33500328,33498954 33513109,33509932,33507321,33503935,33503572,33500490,33499277 Gene ID= ENSG00000129696.12 TPM= 6.79 Transcript Type= protein_coding chr8 33484750 33501260 33484750 33501260 + ENST00000360128.10@MAK16 ENST00000360128.10 protein_coding 33484750,33488378,33488520,33488734,33488988,33490285,33495542,33496625,33497232,33498432 33485221,33488427,33488629,33488798,33489139,33490339,33495616,33496741,33497297,33501260 Gene ID= ENSG00000198042.10 TPM= 8.15 Transcript Type= protein_coding chr8 33547755 33567125 33547755 33567125 - ENST00000256257.1@RNF122 ENST00000256257.1 protein_coding 33566699,33558615,33551344,33551044,33549410,33547755 33567125,33558771,33551389,33551085,33549492,33548867 Gene ID= ENSG00000133874.1 TPM= 11.77 Transcript Type= protein_coding chr8 33591332 33600106 33591332 33600106 - ENST00000256261.8@DUSP26 ENST00000256261.8 protein_coding 33599665,33597295,33593533,33591332 33600106,33597591,33593747,33592212 Gene ID= ENSG00000133878.8 TPM= 132.66 Transcript Type= protein_coding chr8 33591330 33597806 33591330 33597806 - transcript852.chr8.nic@DUSP26 transcript852.chr8.nic protein_coding 33597295,33593533,33591330 33597806,33593747,33592212 Gene ID= ENSG00000133878.8 TPM= 20.37 Transcript Type= NA chr8 37695751 37700021 37695751 37700021 + ENST00000331569.5@ZNF703 ENST00000331569.5 protein_coding 37695751,37697145 37696222,37700021 Gene ID= ENSG00000183779.6 TPM= 13.58 Transcript Type= protein_coding chr8 37736692 37754624 37736692 37754624 + transcript855.chr8.nic@ERLIN2 transcript855.chr8.nic protein_coding 37736692,37737908,37740365,37741772,37744355,37744571,37749559,37749794,37750395,37751626,37753450,37753915 37737007,37738029,37740446,37741818,37744416,37744696,37749632,37749852,37750486,37751715,37753529,37754624 Gene ID= ENSG00000147475.14 TPM= 2.72 Transcript Type= NA chr8 37736599 37746522 37736599 37746522 + ENST00000397228.6@ERLIN2 ENST00000397228.6 protein_coding 37736599,37737908,37740365,37741772,37744355,37744571,37745569 37736678,37738029,37740446,37741818,37744416,37744696,37746522 Gene ID= ENSG00000147475.14 TPM= 3.62 Transcript Type= protein_coding chr8 37762593 37779767 37762593 37779767 + ENST00000328195.7@PLPBP ENST00000328195.7 protein_coding 37762593,37765526,37765711,37766280,37772755,37775339,37775918,37777973 37762758,37765633,37765746,37766355,37772889,37775481,37776016,37779767 Gene ID= ENSG00000147471.11 TPM= 80.59 Transcript Type= protein_coding chr8 37843268 37849904 37843268 37849904 - ENST00000220659.10@BRF2 ENST00000220659.10 protein_coding 37849630,37848596,37846854,37843268 37849904,37848655,37847175,37845213 Gene ID= ENSG00000104221.12 TPM= 37.13 Transcript Type= protein_coding chr8 38105530 38139707 38105530 38139707 + transcript875.chr8.nic@ASH2L transcript875.chr8.nic protein_coding 38105530,38106378,38107021,38110379,38110739,38114192,38114905,38116650,38119270,38120932,38128291,38128758,38133454,38138816,38138964 38105738,38106444,38107166,38110467,38110833,38114287,38115000,38116725,38119363,38121149,38128458,38128951,38133546,38138875,38139707 Gene ID= ENSG00000129691.15 TPM= 2.72 Transcript Type= NA chr8 38143649 38151265 38143649 38151265 - ENST00000276449.8@STAR ENST00000276449.8 protein_coding 38150755,38148641,38148200,38146289,38145963,38145222,38143649 38151265,38148754,38148327,38146447,38146147,38145315,38144386 Gene ID= ENSG00000147465.11 TPM= 26044.72 Transcript Type= protein_coding chr8 38143652 38150992 38143652 38150992 - ENST00000520114.1@STAR ENST00000520114.1 protein_coding 38150755,38148200,38146289,38143652 38150992,38148754,38146447,38146147 Gene ID= ENSG00000147465.11 TPM= 241.78 Transcript Type= retained_intron chr8 38163336 38176768 38163336 38176768 - transcript998.chr8.nnic@LSM1 transcript998.chr8.nnic protein_coding 38176697,38171965,38169802,38163336 38176768,38172033,38169917,38163840 Gene ID= ENSG00000175324.9 TPM= 1.81 Transcript Type= NA chr8 38163321 38176716 38163321 38176716 - ENST00000311351.8@LSM1 ENST00000311351.8 protein_coding 38176275,38171965,38169802,38163321 38176716,38172033,38169917,38163840 Gene ID= ENSG00000175324.9 TPM= 43.47 Transcript Type= protein_coding chr8 38163335 38176674 38163335 38176674 - ENST00000520755.5@LSM1 ENST00000520755.5 protein_coding 38176275,38171965,38163335 38176674,38172033,38163840 Gene ID= ENSG00000175324.9 TPM= 5.43 Transcript Type= protein_coding chr8 38176599 38213301 38176599 38213301 + ENST00000287322.4@BAG4 ENST00000287322.4 protein_coding 38176599,38192688,38207512,38209013,38210008 38177139,38192795,38207766,38209267,38213301 Gene ID= ENSG00000156735.10 TPM= 18.11 Transcript Type= protein_coding chr8 38231343 38262833 38231343 38262833 + ENST00000397166.6@DDHD2 ENST00000397166.6 protein_coding 38231343,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38246233,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260600 38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38246300,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262833 Gene ID= ENSG00000085788.13 TPM= 24 Transcript Type= protein_coding chr8 38231610 38262769 38231610 38262769 + transcript1007.chr8.nnic@DDHD2 transcript1007.chr8.nnic protein_coding 38231610,38232987,38234394,38237538,38238089,38240275,38242250,38245742,38247713,38249708,38251912,38252132,38252722,38252957,38253556,38260040,38260600 38231859,38233214,38234584,38237627,38238209,38240364,38242385,38245950,38247835,38249803,38252028,38252287,38252824,38253127,38253718,38260147,38262769 Gene ID= ENSG00000085788.13 TPM= 4.07 Transcript Type= NA chr8 38231633 38247675 38231633 38247675 + transcript1011.chr8.nic@DDHD2 transcript1011.chr8.nic protein_coding 38231633,38232987,38234394,38237538,38238089,38240275,38242250,38245742 38231859,38233214,38234584,38237627,38238209,38240364,38242385,38247675 Gene ID= ENSG00000085788.13 TPM= 1.81 Transcript Type= NA chr8 38263136 38269232 38263136 38269232 - transcript1016.chr8.nic@PLPP5 transcript1016.chr8.nic protein_coding 38269126,38268882,38268371,38267897,38267267,38266141,38263136 38269232,38268990,38268461,38267960,38267391,38266311,38263406 Gene ID= ENSG00000147535.16 TPM= 2.72 Transcript Type= NA chr8 38263134 38269232 38263134 38269232 - transcript1022.chr8.nic@PLPP5 transcript1022.chr8.nic protein_coding 38269126,38267897,38267267,38266141,38263134 38269232,38268990,38267391,38266311,38264604 Gene ID= ENSG00000147535.16 TPM= 2.11 Transcript Type= NA chr8 38266980 38269243 38266980 38269243 - ENST00000419686.2@PLPP5 ENST00000419686.2 protein_coding 38269126,38268882,38268371,38267897,38266980 38269243,38268990,38268461,38267960,38267391 Gene ID= ENSG00000147535.16 TPM= 15.39 Transcript Type= protein_coding chr8 38263130 38269220 38263130 38269220 - ENST00000424479.6@PLPP5 ENST00000424479.6 protein_coding 38269126,38268882,38268371,38267897,38267267,38266141,38263130 38269220,38268990,38268461,38267960,38267391,38266311,38264604 Gene ID= ENSG00000147535.16 TPM= 12.07 Transcript Type= protein_coding chr8 38263130 38269140 38263130 38269140 - ENST00000529359.5@PLPP5 ENST00000529359.5 protein_coding 38268882,38268371,38267897,38267267,38266141,38263130 38269140,38268461,38267960,38267391,38266311,38264604 Gene ID= ENSG00000147535.16 TPM= 1.2 Transcript Type= protein_coding chr8 38264739 38269207 38264739 38269207 - ENST00000422581.6@PLPP5 ENST00000422581.6 protein_coding 38269126,38268882,38268371,38267897,38267267,38266141,38264739 38269207,38268990,38268461,38267960,38267391,38266311,38264949 Gene ID= ENSG00000147535.16 TPM= 3.62 Transcript Type= protein_coding chr8 38319764 38382273 38319764 38382273 - transcript1033.chr8.nic@NSD3 transcript1033.chr8.nic protein_coding 38381799,38347497,38338536,38337305,38331431,38329378,38326730,38319764 38382273,38348215,38338607,38337467,38331585,38329893,38326856,38321172 Gene ID= ENSG00000147548.16 TPM= 2.26 Transcript Type= NA chr8 38316417 38382272 38316417 38382272 - ENST00000316985.7@NSD3 ENST00000316985.7 protein_coding 38381799,38347497,38338536,38337305,38331431,38329378,38326730,38321072,38318895,38316417 38382272,38348215,38338607,38337467,38331585,38329893,38326856,38321172,38318940,38318038 Gene ID= ENSG00000147548.16 TPM= 24 Transcript Type= protein_coding chr8 38411139 38468834 38411139 38468834 - ENST00000447712.6@FGFR1 ENST00000447712.6 protein_coding 38467981,38457356,38429682,38428346,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411139 38468834,38457534,38429948,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804 Gene ID= ENSG00000077782.19 TPM= 2.33 Transcript Type= protein_coding chr8 38411140 38467730 38411140 38467730 - transcript1041.chr8.nnic@FGFR1 transcript1041.chr8.nnic protein_coding 38467672,38457356,38428346,38427921,38426122,38424509,38421797,38419529,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411140 38467730,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804 Gene ID= ENSG00000077782.19 TPM= 2.92 Transcript Type= NA chr8 38411140 38468664 38411140 38468664 - transcript1042.chr8.nnic@FGFR1 transcript1042.chr8.nnic protein_coding 38467981,38457356,38428346,38427921,38426122,38424509,38421797,38419529,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38411140 38468664,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804 Gene ID= ENSG00000077782.19 TPM= 3.83 Transcript Type= NA chr8 38412732 38468616 38412732 38468616 - ENST00000326324.10@FGFR1 ENST00000326324.10 protein_coding 38467981,38457356,38428352,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38412732 38468616,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804 Gene ID= ENSG00000077782.19 TPM= 9.06 Transcript Type= protein_coding chr8 38412730 38468616 38412730 38468616 - ENST00000356207.9@FGFR1 ENST00000356207.9 protein_coding 38467981,38457356,38428346,38427921,38426122,38424509,38421797,38419533,38418228,38417870,38417306,38415870,38414779,38414559,38414152,38413918,38412730 38468616,38457534,38428435,38428093,38426245,38424699,38421941,38419735,38418373,38417991,38417416,38416060,38414901,38414629,38414289,38414023,38413804 Gene ID= ENSG00000077782.19 TPM= 5.59 Transcript Type= protein_coding chr8 38728303 38853027 38728303 38853027 + transcript1052.chr8.nic@TACC1 transcript1052.chr8.nic protein_coding 38728303,38788704,38819522,38825308,38827168,38831125,38836162,38838470,38840224,38842287,38843289,38846699,38847955 38728671,38788819,38820635,38825368,38827288,38831177,38836287,38838546,38840267,38842447,38843395,38846819,38853027 Gene ID= ENSG00000147526.19 TPM= 13.58 Transcript Type= NA chr8 38728592 38748045 38728592 38748045 + transcript1059.chr8.nic@TACC1 transcript1059.chr8.nic protein_coding 38728592,38742351,38744895 38728671,38742451,38748045 Gene ID= ENSG00000147526.19 TPM= 1.81 Transcript Type= NA chr8 38988809 38996536 38988809 38996536 - transcript1074.chr8.nnic@TM2D2 transcript1074.chr8.nnic protein_coding 38996213,38995318,38993545,38988809 38996536,38995693,38993660,38991545 Gene ID= ENSG00000169490.16 TPM= 1.81 Transcript Type= NA chr8 38990759 38996536 38990759 38996536 - transcript1077.chr8.nic@TM2D2 transcript1077.chr8.nic protein_coding 38996419,38995318,38993545,38990759 38996536,38995794,38993660,38991545 Gene ID= ENSG00000169490.16 TPM= 1.81 Transcript Type= NA chr8 38988808 38996533 38988808 38996533 - ENST00000456397.6@TM2D2 ENST00000456397.6 protein_coding 38996213,38995318,38993545,38988808 38996533,38995405,38993660,38991545 Gene ID= ENSG00000169490.16 TPM= 56.14 Transcript Type= protein_coding chr8 38990805 38996509 38990805 38996509 - ENST00000397070.6@TM2D2 ENST00000397070.6 protein_coding 38996213,38995318,38993545,38990805 38996509,38995794,38993660,38991545 Gene ID= ENSG00000169490.16 TPM= 7.24 Transcript Type= protein_coding chr8 38996986 39105001 38996986 39105001 + ENST00000487273.6@ADAM9 ENST00000487273.6 protein_coding 38996986,39007886,39011658,39013965,39016118,39017219,39018853,39021643,39023156,39025803,39026677,39041946,39054481,39055577,39071298,39077228,39082641,39082968,39090047,39091259,39101863,39103607 38997160,39007983,39011716,39014043,39016194,39017414,39018918,39021714,39023325,39025884,39026810,39042117,39054573,39055772,39071403,39077411,39082721,39083073,39090188,39091346,39101930,39105001 Gene ID= ENSG00000168615.11 TPM= 127.68 Transcript Type= protein_coding chr8 41261958 41309497 41261958 41309497 - ENST00000220772.7@SFRP1 ENST00000220772.7 protein_coding 41308616,41303461,41261958 41309497,41303538,41265489 Gene ID= ENSG00000104332.11 TPM= 7.24 Transcript Type= protein_coding chr8 41490482 41510980 41490482 41510980 + ENST00000520817.5@GOLGA7 ENST00000520817.5 protein_coding 41490482,41490833,41497509,41505911,41507059,41509584 41490617,41490965,41497661,41506012,41507121,41510980 Gene ID= ENSG00000147533.16 TPM= 55.99 Transcript Type= protein_coding chr8 41490562 41510974 41490562 41510974 + ENST00000405786.2@GOLGA7 ENST00000405786.2 protein_coding 41490562,41490833,41497509,41505911,41507054,41509584 41490617,41490965,41497661,41506012,41507121,41510974 Gene ID= ENSG00000147533.16 TPM= 3.02 Transcript Type= protein_coding chr8 41490654 41510980 41490654 41510980 + ENST00000357743.8@GOLGA7 ENST00000357743.8 protein_coding 41490654,41497509,41505911,41507059,41509584 41490965,41497661,41506012,41507121,41510980 Gene ID= ENSG00000147533.16 TPM= 7.09 Transcript Type= protein_coding chr8 41578181 41621938 41578181 41621938 + transcript1106.chr8.nic@GPAT4 transcript1106.chr8.nic protein_coding 41578181,41598292,41609416,41609655,41610736,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41620893 41578580,41599304,41609485,41609955,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41621938 Gene ID= ENSG00000158669.11 TPM= 19.7 Transcript Type= NA chr8 41578168 41621938 41578168 41621938 + transcript1108.chr8.nic@GPAT4 transcript1108.chr8.nic protein_coding 41578168,41598292,41609416,41609655,41611903,41612180,41612845,41614386,41614963,41618684,41618898,41620893 41578278,41599304,41609485,41610810,41611992,41612273,41612960,41614441,41615048,41618812,41618977,41621938 Gene ID= ENSG00000158669.11 TPM= 20.15 Transcript Type= NA chr8 42153011 42171182 42153011 42171182 + ENST00000396926.7@AP3M2 ENST00000396926.7 protein_coding 42153011,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168961 42153105,42154960,42158112,42162418,42165156,42165560,42167371,42167810,42171182 Gene ID= ENSG00000070718.11 TPM= 46.18 Transcript Type= protein_coding chr8 42153038 42171184 42153038 42171184 + transcript1119.chr8.nnic@AP3M2 transcript1119.chr8.nnic protein_coding 42153038,42154616,42157941,42162281,42165071,42165427,42167164,42167666,42168961 42153105,42154960,42158112,42162418,42165156,42165702,42167371,42167810,42171184 Gene ID= ENSG00000070718.11 TPM= 2.72 Transcript Type= NA chr8 42175233 42207565 42175233 42207565 - ENST00000429089.6@PLAT ENST00000429089.6 protein_coding 42207494,42206647,42193114,42191372,42188934,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175233 42207565,42206698,42193211,42191414,42189071,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151 Gene ID= ENSG00000104368.17 TPM= 9.21 Transcript Type= protein_coding chr8 42175233 42207724 42175233 42207724 - ENST00000220809.8@PLAT ENST00000220809.8 protein_coding 42207494,42193114,42191372,42188934,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175233 42207724,42193211,42191414,42189071,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151 Gene ID= ENSG00000104368.17 TPM= 312.11 Transcript Type= protein_coding chr8 42175237 42207676 42175237 42207676 - ENST00000352041.7@PLAT ENST00000352041.7 protein_coding 42207494,42193114,42191372,42187906,42187398,42185081,42182719,42181937,42180490,42180242,42179926,42178897,42175237 42207676,42193211,42191414,42188016,42187572,42185172,42182890,42182022,42180685,42180378,42180066,42179063,42176151 Gene ID= ENSG00000104368.17 TPM= 10.11 Transcript Type= protein_coding chr8 42271302 42332653 42271302 42332653 + ENST00000416505.5@IKBKB ENST00000416505.5 protein_coding 42271302,42272083,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914 42271469,42272205,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42332653 Gene ID= ENSG00000104365.13 TPM= 11.47 Transcript Type= protein_coding chr8 42271302 42331608 42271302 42331608 + ENST00000520810.5@IKBKB ENST00000520810.5 protein_coding 42271302,42272083,42288634,42290156,42293443,42305187,42306343,42308901,42314322,42316210,42316710,42317657,42318552,42319270,42319585,42320735,42321896,42322054,42322347,42325970,42329124,42330914 42271469,42272205,42288728,42290273,42293512,42305275,42306432,42309025,42314429,42316339,42316904,42317771,42318675,42319421,42319646,42320844,42321945,42322153,42322494,42326097,42329214,42331608 Gene ID= ENSG00000104365.13 TPM= 11.47 Transcript Type= protein_coding chr8 42338455 42371808 42338455 42371808 + ENST00000265421.8@POLB ENST00000265421.8 protein_coding 42338455,42339012,42344953,42349016,42350007,42352519,42355516,42357169,42357320,42361295,42362612,42369271,42369849,42371563 42338685,42339069,42345019,42349090,42350065,42352568,42355567,42357223,42357392,42361365,42362698,42369335,42369988,42371808 Gene ID= ENSG00000070501.11 TPM= 8.15 Transcript Type= protein_coding chr8 42391652 42405895 42391652 42405895 + transcript1163.chr8.nic@VDAC3 transcript1163.chr8.nic protein_coding 42391652,42393845,42394210,42395084,42398712,42399651,42401788,42404867,42405371 42391928,42393884,42394278,42395133,42398864,42399703,42403461,42404924,42405895 Gene ID= ENSG00000078668.13 TPM= 16.3 Transcript Type= NA chr8 42391903 42405897 42391903 42405897 + ENST00000022615.8@VDAC3 ENST00000022615.8 protein_coding 42391903,42393845,42394210,42395084,42398712,42399651,42401788,42403311,42404867,42405371 42391928,42393884,42394278,42395133,42398864,42399703,42402015,42403461,42404924,42405897 Gene ID= ENSG00000078668.13 TPM= 113.19 Transcript Type= protein_coding chr8 42416477 42541752 42416477 42541752 - transcript1164.chr8.nnic@SLC20A2 transcript1164.chr8.nnic protein_coding 42541538,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42419595,42416477 42541752,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42419670,42417967 Gene ID= ENSG00000168575.9 TPM= 2.72 Transcript Type= NA chr8 42416477 42541752 42416477 42541752 - transcript1168.chr8.nnic@SLC20A2 transcript1168.chr8.nnic protein_coding 42541538,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416477 42541752,42472654,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967 Gene ID= ENSG00000168575.9 TPM= 10.87 Transcript Type= NA chr8 42416477 42541518 42416477 42541518 - transcript1169.chr8.nnic@SLC20A2 transcript1169.chr8.nnic protein_coding 42540915,42472102,42465777,42463005,42459896,42444646,42439450,42436989,42430064,42428758,42416477 42541518,42472656,42465917,42463090,42459992,42444762,42439653,42437577,42430249,42428842,42417967 Gene ID= ENSG00000168575.9 TPM= 4.53 Transcript Type= NA chr8 42534660 42541503 42534660 42541503 - ENST00000523340.1@SLC20A2 ENST00000523340.1 protein_coding 42540915,42534660 42541503,42535335 Gene ID= ENSG00000168575.9 TPM= 1.81 Transcript Type= processed_transcript chr8 42541613 42552980 42541613 42552980 + ENST00000414154.6@SMIM19 ENST00000414154.6 protein_coding 42541613,42546469,42548656,42552544 42541705,42546606,42548780,42552980 Gene ID= ENSG00000176209.11 TPM= 46.18 Transcript Type= protein_coding chr8 42541608 42552980 42541608 42552980 + ENST00000417410.6@SMIM19 ENST00000417410.6 protein_coding 42541608,42546469,42548656,42552544 42542373,42546606,42548780,42552980 Gene ID= ENSG00000176209.11 TPM= 25.36 Transcript Type= protein_coding chr8 42836674 42843325 42836674 42843325 - ENST00000254250.7@THAP1 ENST00000254250.7 protein_coding 42843024,42839186,42836674 42843325,42839381,42838336 Gene ID= ENSG00000131931.8 TPM= 22.64 Transcript Type= protein_coding chr8 42855709 42897290 42855709 42897290 - transcript1189.chr8.nnic@RNF170 transcript1189.chr8.nnic protein_coding 42897240,42889303,42887728,42873931,42870004,42865416,42861745,42855709 42897290,42889414,42887871,42874006,42870112,42865489,42861855,42856428 Gene ID= ENSG00000120925.15 TPM= 1.81 Transcript Type= NA chr8 42853301 42896721 42853301 42896721 - ENST00000527424.5@RNF170 ENST00000527424.5 protein_coding 42896484,42887728,42873931,42870004,42865416,42861745,42853301 42896721,42887871,42874006,42870112,42865489,42861855,42856428 Gene ID= ENSG00000120925.15 TPM= 6.34 Transcript Type= protein_coding chr8 42861330 42896723 42861330 42896723 - ENST00000528318.5@RNF170 ENST00000528318.5 protein_coding 42896484,42887728,42873931,42870004,42865416,42861330 42896723,42887871,42874006,42870112,42865489,42861855 Gene ID= ENSG00000120925.15 TPM= 1.81 Transcript Type= retained_intron chr8 43056153 43085788 43056153 43085788 + ENST00000302279.7@FNTA ENST00000302279.7 protein_coding 43056153,43059092,43064101,43069555,43072181,43077216,43083118,43084710,43085160 43056546,43059177,43064215,43069659,43072307,43077364,43083180,43084881,43085788 Gene ID= ENSG00000168522.12 TPM= 77.42 Transcript Type= protein_coding chr8 43056297 43085786 43056297 43085786 + transcript1207.chr8.nic@FNTA transcript1207.chr8.nic protein_coding 43056297,43069555,43072181,43077216,43083118,43084710,43085160 43056546,43069659,43072307,43077364,43083180,43084881,43085786 Gene ID= ENSG00000168522.12 TPM= 3.17 Transcript Type= NA chr8 43140476 43201822 43140476 43201822 + transcript1210.chr8.nic@HGSNAT transcript1210.chr8.nic protein_coding 43140476,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713,43178074,43182145,43191474,43192304,43193757,43196430,43196948,43197672,43197840,43199388 43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43173743,43178234,43182260,43191595,43192430,43193843,43196540,43197025,43197742,43197952,43201822 Gene ID= ENSG00000165102.14 TPM= 1.81 Transcript Type= NA chr8 43140409 43201822 43140409 43201822 + transcript1215.chr8.nnic@HGSNAT transcript1215.chr8.nnic protein_coding 43140409,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43182145,43191474,43192304,43193757,43196948,43197672,43197840,43199388 43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43182260,43191595,43192430,43193843,43197025,43197742,43197952,43201822 Gene ID= ENSG00000165102.14 TPM= 1.81 Transcript Type= NA chr8 43140464 43174822 43140464 43174822 + transcript1216.chr8.nic@HGSNAT transcript1216.chr8.nic protein_coding 43140464,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713 43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43174822 Gene ID= ENSG00000165102.14 TPM= 4.53 Transcript Type= NA chr8 43140455 43202855 43140455 43202855 + ENST00000379644.8@HGSNAT ENST00000379644.8 protein_coding 43140455,43146948,43158575,43158923,43161438,43169173,43170585,43172310,43173713,43178074,43182145,43191474,43192304,43193757,43196948,43197672,43197840,43199388 43140614,43147063,43158711,43159044,43161507,43169242,43170694,43172386,43173743,43178234,43182260,43191595,43192430,43193843,43197025,43197742,43197952,43202855 Gene ID= ENSG00000165102.14 TPM= 38.03 Transcript Type= protein_coding chr8 47260575 47736306 47260575 47736306 + ENST00000297423.8@SPIDR ENST00000297423.8 protein_coding 47260575,47279862,47284028,47291033,47293867,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47727200,47728933,47729412,47735307 47260991,47280017,47284094,47291137,47294030,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47727293,47729047,47729465,47736306 Gene ID= ENSG00000164808.16 TPM= 19.47 Transcript Type= protein_coding chr8 47260904 47735911 47260904 47735911 + transcript1222.chr8.nnic@SPIDR transcript1222.chr8.nnic protein_coding 47260904,47279862,47284028,47291033,47293867,47396376,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47727200,47728933,47729412,47735307 47260991,47280017,47284094,47291137,47294030,47396626,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47727293,47729102,47729465,47735911 Gene ID= ENSG00000164808.16 TPM= 3.17 Transcript Type= NA chr8 47260904 47735911 47260904 47735911 + transcript1230.chr8.nic@SPIDR transcript1230.chr8.nic protein_coding 47260904,47279862,47284028,47291033,47293867,47407861,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47727200,47728933,47729412,47735307 47260991,47280017,47284094,47291137,47294030,47407961,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47713641,47727293,47729047,47729465,47735911 Gene ID= ENSG00000164808.16 TPM= 5.89 Transcript Type= NA chr8 47260904 47735911 47260904 47735911 + transcript1231.chr8.nic@SPIDR transcript1231.chr8.nic protein_coding 47260904,47279862,47284028,47291033,47293867,47440323,47595811,47598946,47673801,47700403,47701721,47701956,47712662,47713489,47727200,47728933,47729412,47735307 47260991,47280017,47284094,47291137,47294030,47440542,47596006,47599196,47673941,47700490,47701864,47702015,47712872,47713641,47727293,47729047,47729465,47735911 Gene ID= ENSG00000164808.16 TPM= 4.98 Transcript Type= NA chr8 47960898 47978160 47960898 47978160 + ENST00000523944.5@MCM4 ENST00000523944.5 protein_coding 47960898,47961131,47961516,47962053,47962305,47962764,47962945,47964574,47966187,47967365,47969798,47970511,47971341,47972857,47974734,47975715,47976686 47961014,47961214,47961680,47962216,47962406,47962859,47963040,47964712,47966407,47967485,47970057,47970876,47971468,47973064,47974962,47975848,47978160 Gene ID= ENSG00000104738.16 TPM= 46.18 Transcript Type= protein_coding chr8 48008400 48064708 48008400 48064708 + ENST00000523111.6@UBE2V2 ENST00000523111.6 protein_coding 48008400,48043033,48049853,48060682 48008470,48043181,48049978,48064708 Gene ID= ENSG00000169139.11 TPM= 112.29 Transcript Type= protein_coding chr8 48917768 48921429 48917768 48921429 - ENST00000020945.3@SNAI2 ENST00000020945.3 protein_coding 48921187,48919896,48917768 48921429,48920441,48918988 Gene ID= ENSG00000019549.9 TPM= 21.73 Transcript Type= protein_coding chr8 51817581 51899061 51817581 51899061 - transcript1260.chr8.nic@PCMTD1 transcript1260.chr8.nic protein_coding 51898930,51860845,51845661,51839447,51833518,51831444,51817581 51899061,51861246,51845763,51839638,51833689,51831567,51820718 Gene ID= ENSG00000168300.13 TPM= 5.43 Transcript Type= NA chr8 51817581 51899129 51817581 51899129 - transcript1264.chr8.nic@PCMTD1 transcript1264.chr8.nic protein_coding 51898930,51845661,51833518,51831444,51817581 51899129,51845763,51833689,51831567,51820718 Gene ID= ENSG00000168300.13 TPM= 6.34 Transcript Type= NA chr8 52622459 52714423 52622459 52714423 - ENST00000435644.6@RB1CC1 ENST00000435644.6 protein_coding 52714075,52686853,52685399,52683887,52683549,52676369,52673845,52668021,52661535,52661095,52660926,52660596,52658873,52657998,52656008,52645702,52642704,52642351,52636015,52634921,52630470,52628041,52624717,52622459 52714423,52686967,52685520,52684013,52683719,52676571,52674274,52668191,52661719,52661281,52661007,52660657,52658976,52658124,52657908,52645867,52642812,52642591,52636069,52634968,52630528,52628168,52624787,52623859 Gene ID= ENSG00000023287.12 TPM= 6.34 Transcript Type= protein_coding chr8 53715673 53843262 53715673 53843262 - ENST00000359530.6@ATP6V1H ENST00000359530.6 protein_coding 53843034,53841578,53832984,53829444,53817417,53814662,53811164,53801799,53795647,53771989,53769618,53756555,53743577,53715673 53843262,53841725,53833086,53829533,53817530,53814766,53811217,53801896,53795839,53772167,53769743,53756656,53743690,53716024 Gene ID= ENSG00000047249.17 TPM= 129.49 Transcript Type= protein_coding chr8 53966556 54022529 53966556 54022529 - ENST00000521604.6@TCEA1 ENST00000521604.6 protein_coding 54022063,54010430,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966556 54022529,54010492,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112 Gene ID= ENSG00000187735.13 TPM= 213.42 Transcript Type= protein_coding chr8 53966552 54022448 53966552 54022448 - ENST00000396401.7@TCEA1 ENST00000396401.7 protein_coding 54022063,53999945,53993668,53988114,53986969,53984363,53979025,53970392,53966552 54022448,54000050,53993755,53988259,53987025,53984517,53979171,53970463,53968112 Gene ID= ENSG00000187735.13 TPM= 9.36 Transcript Type= protein_coding chr8 54046367 54101935 54046367 54101935 - transcript1299.chr8.nic@LYPLA1 transcript1299.chr8.nic protein_coding 54101755,54100908,54065748,54063328,54062254,54055060,54052655,54051012,54046367 54101935,54100939,54065813,54063375,54062324,54055133,54052756,54051146,54048118 Gene ID= ENSG00000120992.17 TPM= 4.89 Transcript Type= NA chr8 54046367 54101971 54046367 54101971 - transcript1303.chr8.nnic@LYPLA1 transcript1303.chr8.nnic protein_coding 54101755,54100908,54065788,54063328,54062254,54055060,54052655,54051012,54046367 54101971,54100939,54065813,54063375,54062324,54055133,54052756,54051188,54048118 Gene ID= ENSG00000120992.17 TPM= 9.42 Transcript Type= NA chr8 54046367 54102017 54046367 54102017 - ENST00000316963.7@LYPLA1 ENST00000316963.7 protein_coding 54101755,54100908,54065748,54063328,54062254,54055060,54052655,54051012,54046367 54102017,54100939,54065813,54063375,54062324,54055133,54052756,54051188,54048118 Gene ID= ENSG00000120992.17 TPM= 132.57 Transcript Type= protein_coding chr8 54135210 54147901 54135210 54147901 + ENST00000260102.8@MRPL15 ENST00000260102.8 protein_coding 54135210,54136511,54137268,54142663,54147382 54135391,54136665,54137433,54142786,54147901 Gene ID= ENSG00000137547.8 TPM= 32.6 Transcript Type= protein_coding chr8 54457935 54460888 54457935 54460888 + ENST00000297316.4@SOX17 ENST00000297316.4 protein_coding 54457935,54459058 54458445,54460888 Gene ID= ENSG00000164736.5 TPM= 8.15 Transcript Type= protein_coding chr8 55738756 55773410 55738756 55773410 - transcript1317.chr8.nic@TMEM68 transcript1317.chr8.nic protein_coding 55773227,55763936,55762635,55756244,55750964,55745061,55743481,55738756 55773410,55763980,55763028,55756411,55751157,55745121,55743620,55740218 Gene ID= ENSG00000167904.14 TPM= 4.53 Transcript Type= NA chr8 55738758 55773354 55738758 55773354 - ENST00000434581.6@TMEM68 ENST00000434581.6 protein_coding 55773269,55763936,55762635,55756244,55750964,55745061,55743481,55738758 55773354,55763980,55763028,55756411,55751157,55745121,55743620,55740218 Gene ID= ENSG00000167904.14 TPM= 17.21 Transcript Type= protein_coding chr8 55773442 55825444 55773442 55825444 + transcript1322.chr8.nic@TGS1 transcript1322.chr8.nic protein_coding 55773442,55782748,55785719,55786238,55790182,55792698,55795978,55798914,55802457,55804893,55813055,55824581 55773719,55782812,55785891,55787060,55790299,55792784,55796152,55799220,55802606,55805036,55813118,55825444 Gene ID= ENSG00000137574.10 TPM= 3.62 Transcript Type= NA chr8 56073054 56074510 56073054 56074510 - ENST00000521262.5@RPS20 ENST00000521262.5 protein_coding 56074254,56074060,56073695,56073054 56074510,56074159,56073768,56073272 Gene ID= ENSG00000008988.9 TPM= 6.34 Transcript Type= protein_coding chr8 56211755 56218613 56211755 56218613 + ENST00000355315.7@CHCHD7 ENST00000355315.7 protein_coding 56211755,56214598,56216433,56217331 56211837,56214667,56216531,56218613 Gene ID= ENSG00000170791.17 TPM= 17.21 Transcript Type= protein_coding chr8 56211798 56218619 56211798 56218619 + ENST00000518801.5@CHCHD7 ENST00000518801.5 protein_coding 56211798,56212762,56214598,56216389,56217331 56211837,56212889,56214667,56216531,56218619 Gene ID= ENSG00000170791.17 TPM= 1.81 Transcript Type= protein_coding chr8 56963098 56993877 56963098 56993877 - transcript1338.chr8.nic@IMPAD1 transcript1338.chr8.nic protein_coding 56993199,56980035,56978050,56967110,56966191,56963098 56993877,56980197,56978145,56967218,56966352,56964064 Gene ID= ENSG00000104331.8 TPM= 1.81 Transcript Type= NA chr8 56963511 56993877 56963511 56993877 - transcript1340.chr8.nic@IMPAD1 transcript1340.chr8.nic protein_coding 56993199,56980035,56978050,56963511 56993877,56980197,56978145,56966352 Gene ID= ENSG00000104331.8 TPM= 3.62 Transcript Type= NA chr8 56957933 56993844 56957933 56993844 - ENST00000262644.8@IMPAD1 ENST00000262644.8 protein_coding 56993199,56980035,56978050,56966191,56957933 56993844,56980197,56978145,56966352,56964064 Gene ID= ENSG00000104331.8 TPM= 73.35 Transcript Type= protein_coding chr8 58553254 58582858 58553254 58582858 + ENST00000523483.5@SDCBP ENST00000523483.5 protein_coding 58553254,58560284,58565019,58570887,58572205,58575903,58578033,58579623,58580517,58581686 58553303,58561795,58565084,58570965,58572314,58576061,58578208,58579794,58580608,58582858 Gene ID= ENSG00000137575.11 TPM= 4.53 Transcript Type= protein_coding chr8 58553217 58582830 58553217 58582830 + ENST00000413219.6@SDCBP ENST00000413219.6 protein_coding 58553217,58565022,58570887,58572205,58575900,58578033,58579623,58580517,58581686 58553303,58565084,58570965,58572314,58576061,58578208,58579794,58580608,58582830 Gene ID= ENSG00000137575.11 TPM= 65.2 Transcript Type= protein_coding chr8 58583504 58659844 58583504 58659844 - ENST00000038176.7@NSMAF ENST00000038176.7 protein_coding 58659573,58642984,58635468,58635305,58635189,58631496,58623709,58623377,58623220,58609604,58607769,58605927,58603210,58602058,58601445,58601285,58599970,58599750,58599232,58597860,58597387,58595560,58594232,58590867,58590007,58589452,58587618,58586458,58585898,58585652,58583504 58659844,58643073,58635546,58635372,58635225,58631546,58623780,58623424,58623272,58609733,58607840,58606035,58603386,58602137,58601535,58601348,58600021,58599870,58599363,58597902,58597550,58595659,58594290,58590934,58590074,58589575,58587701,58586608,58586000,58585761,58584200 Gene ID= ENSG00000035681.7 TPM= 39.84 Transcript Type= protein_coding chr8 60187347 60281412 60187347 60281412 - ENST00000317995.4@CA8 ENST00000317995.4 protein_coding 60281048,60279689,60265925,60232284,60226873,60224537,60222649,60208750,60187347 60281412,60279880,60266049,60232379,60226935,60224585,60222761,60208919,60189985 Gene ID= ENSG00000178538.9 TPM= 5.43 Transcript Type= protein_coding chr8 60516857 60623627 60516857 60623627 + ENST00000262646.11@RAB2A ENST00000262646.11 protein_coding 60516857,60558852,60572046,60584208,60584723,60591858,60618580,60620674 60517253,60558923,60572113,60584290,60584815,60591969,60618648,60623627 Gene ID= ENSG00000104388.14 TPM= 215.52 Transcript Type= protein_coding chr8 60678760 60781250 60678760 60781250 + transcript1370.chr8.nic@CHD7 transcript1370.chr8.nic protein_coding 60678760,60741259,60781000 60679082,60743097,60781250 Gene ID= ENSG00000171316.11 TPM= 1.81 Transcript Type= NA chr8 61500550 61714625 61500550 61714625 - transcript1389.chr8.nic@ASPH transcript1389.chr8.nic protein_coding 61714269,61684039,61680968,61653568,61651050,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61500550 61714625,61684188,61681036,61653660,61651124,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509 Gene ID= ENSG00000198363.17 TPM= 60.74 Transcript Type= NA chr8 61500550 61714639 61500550 61714639 - transcript1391.chr8.nic@ASPH transcript1391.chr8.nic protein_coding 61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61500550 61714639,61684188,61681036,61653660,61651124,61646878,61644632,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509 Gene ID= ENSG00000198363.17 TPM= 47.61 Transcript Type= NA chr8 61500550 61714645 61500550 61714645 - transcript1399.chr8.nic@ASPH transcript1399.chr8.nic protein_coding 61714269,61684039,61680968,61653568,61651050,61644600,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61500550 61714645,61684188,61681036,61653660,61651124,61644632,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509 Gene ID= ENSG00000198363.17 TPM= 29.05 Transcript Type= NA chr8 61623703 61714783 61623703 61714783 - transcript1441.chr8.nic@ASPH transcript1441.chr8.nic protein_coding 61714269,61684039,61680968,61653568,61651050,61644600,61643386,61642888,61638322,61637947,61633683,61623703 61714783,61684188,61681036,61653660,61651124,61644632,61643433,61642920,61638363,61638003,61633727,61626280 Gene ID= ENSG00000198363.17 TPM= 28.92 Transcript Type= NA chr8 61500556 61714559 61500556 61714559 - ENST00000379454.8@ASPH ENST00000379454.8 protein_coding 61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61618978,61583944,61576772,61567168,61562744,61555924,61553031,61548071,61525977,61518032,61517528,61500556 61714559,61684188,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61619019,61584029,61576858,61567318,61562880,61556022,61553120,61548208,61526112,61518123,61517661,61503509 Gene ID= ENSG00000198363.17 TPM= 93.34 Transcript Type= protein_coding chr8 61623710 61714596 61623710 61714596 - ENST00000356457.9@ASPH ENST00000356457.9 protein_coding 61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61623710 61714596,61684188,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280 Gene ID= ENSG00000198363.17 TPM= 437.32 Transcript Type= protein_coding chr8 61623710 61714640 61623710 61714640 - ENST00000445642.6@ASPH ENST00000445642.6 protein_coding 61714269,61684039,61680968,61653568,61651050,61646750,61644600,61643386,61642888,61638322,61637947,61633683,61623710 61714640,61684188,61681036,61653660,61651124,61646878,61644632,61643433,61642920,61638363,61638003,61633727,61626280 Gene ID= ENSG00000198363.17 TPM= 88.69 Transcript Type= protein_coding chr8 61624539 61714568 61624539 61714568 - ENST00000518068.5@ASPH ENST00000518068.5 protein_coding 61714269,61684039,61680968,61653568,61651050,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624539 61714568,61684188,61681036,61653660,61651124,61644632,61644001,61643433,61642920,61638363,61638003,61633727,61626280 Gene ID= ENSG00000198363.17 TPM= 159.32 Transcript Type= protein_coding chr8 61624537 61714525 61624537 61714525 - ENST00000519234.5@ASPH ENST00000519234.5 protein_coding 61714269,61684039,61682439,61680968,61653568,61651050,61646750,61644600,61643945,61643386,61642888,61638322,61637947,61633683,61624537 61714525,61684188,61682483,61681036,61653660,61651124,61646878,61644632,61644001,61643433,61642920,61638360,61638003,61633727,61626280 Gene ID= ENSG00000198363.17 TPM= 14.36 Transcript Type= protein_coding chr8 62248591 62965629 62248591 62965629 + ENST00000519049.5@NKAIN3 ENST00000519049.5 protein_coding 62248591,62248973,62579539,62589714,62746932,62918453,62953902,62965354 62248878,62249127,62579676,62589794,62747129,62918513,62953972,62965629 Gene ID= ENSG00000185942.11 TPM= 1.81 Transcript Type= processed_transcript chr8 62579538 62965908 62579538 62965908 + transcript1452.chr8.nnic@NKAIN3 transcript1452.chr8.nnic protein_coding 62579538,62589714,62746932,62918453,62965354 62579676,62589794,62747129,62918513,62965908 Gene ID= ENSG00000185942.11 TPM= 4.53 Transcript Type= NA chr8 62579538 62634479 62579538 62634479 + transcript1455.chr8.nnic@NKAIN3 transcript1455.chr8.nnic protein_coding 62579538,62589714,62634188 62579676,62589794,62634479 Gene ID= ENSG00000185942.11 TPM= 2.72 Transcript Type= NA chr8 63168553 63212786 63168553 63212786 + ENST00000539294.5@YTHDF3 ENST00000539294.5 protein_coding 63168553,63169387,63175331,63186147,63209683 63168901,63169411,63175416,63187745,63212786 Gene ID= ENSG00000185728.16 TPM= 22.64 Transcript Type= protein_coding chr8 65602456 65634207 65602456 65634207 - ENST00000276569.7@ARMC1 ENST00000276569.7 protein_coding 65633998,65627216,65622263,65613244,65605422,65605263,65602456 65634207,65627433,65622354,65613433,65605538,65605337,65604585 Gene ID= ENSG00000104442.9 TPM= 64.29 Transcript Type= protein_coding chr8 65644711 65725988 65644711 65725988 + transcript1477.chr8.nic@MTFR1 transcript1477.chr8.nic protein_coding 65644711,65669873,65682353,65693644,65704694,65707010,65707843,65719380,65725316 65644784,65670018,65682451,65693759,65704929,65707256,65708011,65719481,65725988 Gene ID= ENSG00000066855.15 TPM= 4.53 Transcript Type= NA chr8 65644739 65710556 65644739 65710556 + ENST00000262146.8@MTFR1 ENST00000262146.8 protein_coding 65644739,65669873,65682353,65693644,65704694,65707010,65707843,65708976 65644784,65670018,65682451,65693759,65704929,65707256,65708011,65710556 Gene ID= ENSG00000066855.15 TPM= 22.64 Transcript Type= protein_coding chr8 65717684 65842129 65717684 65842129 - transcript1474.chr8.nnic@PDE7A transcript1474.chr8.nnic protein_coding 65841371,65782783,65779720,65747652,65745407,65739502,65734794,65727170,65726875,65724777,65724255,65723541,65717684 65842129,65782843,65779803,65747803,65745470,65739597,65734894,65727301,65726966,65724840,65724351,65723621,65719495 Gene ID= ENSG00000205268.10 TPM= 2.72 Transcript Type= NA chr8 66432491 66468808 66432491 66468808 + transcript1483.chr8.nic@ADHFE1 transcript1483.chr8.nic protein_coding 66432491,66439236,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269 66432575,66439735,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468808 Gene ID= ENSG00000147576.15 TPM= 2.26 Transcript Type= NA chr8 66432486 66468907 66432486 66468907 + ENST00000396623.7@ADHFE1 ENST00000396623.7 protein_coding 66432486,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66454059,66456817,66457070,66460308,66468269 66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468907 Gene ID= ENSG00000147576.15 TPM= 1.81 Transcript Type= protein_coding chr8 66432487 66468904 66432487 66468904 + transcript1491.chr8.nic@ADHFE1 transcript1491.chr8.nic protein_coding 66432487,66440162,66442798,66444367,66444594,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269 66432575,66440199,66442844,66444420,66444748,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468904 Gene ID= ENSG00000147576.15 TPM= 1.81 Transcript Type= NA chr8 66432498 66468809 66432498 66468809 + ENST00000424777.6@ADHFE1 ENST00000424777.6 protein_coding 66432498,66440162,66442798,66444367,66444594,66445218,66447264,66448865,66451953,66453710,66456817,66457070,66460308,66468269 66432575,66440199,66442844,66444420,66444748,66445414,66447341,66448970,66452105,66454157,66456895,66457166,66460465,66468809 Gene ID= ENSG00000147576.15 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr8 66712714 66862021 66712714 66862021 + transcript1503.chr8.nnic@C8orf44-SGK3 transcript1503.chr8.nnic protein_coding 66712714,66714801,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411 66712833,66714856,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66862021 Gene ID= ENSG00000270024.5 TPM= 1.81 Transcript Type= NA chr8 66775181 66862020 66775181 66862020 + ENST00000396596.2@SGK3 ENST00000396596.2 protein_coding 66775181,66793616,66798542,66804375,66813853,66822372,66828654,66831254,66835763,66835943,66840003,66840211,66841024,66843452,66847193,66850831,66859411 66775319,66793832,66798625,66804447,66813928,66822459,66828703,66831311,66835846,66836074,66840115,66840247,66841110,66843547,66847348,66850920,66862020 Gene ID= ENSG00000104205.12 TPM= 3.62 Transcript Type= protein_coding chr8 66921987 66925541 66921987 66925541 - ENST00000521399.5@SNHG6 ENST00000521399.5 processed_transcript 66925437,66922324,66921987 66925541,66922392,66922114 Gene ID= ENSG00000245910.8 TPM= 1.81 Transcript Type= lincRNA chr8 67043081 67062343 67043081 67062343 - transcript1511.chr8.nic@COPS5 transcript1511.chr8.nic protein_coding 67062106,67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043081 67062343,67062024,67059445,67058211,67057445,67056604,67051341,67045960,67043317 Gene ID= ENSG00000121022.13 TPM= 13.58 Transcript Type= NA chr8 67043079 67062317 67043079 67062317 - ENST00000357849.8@COPS5 ENST00000357849.8 protein_coding 67061854,67059211,67058083,67057380,67056519,67051230,67045812,67043079 67062317,67059445,67058211,67057445,67056604,67051341,67045960,67043317 Gene ID= ENSG00000121022.13 TPM= 52.52 Transcript Type= protein_coding chr8 67197661 67343888 67197661 67343888 - transcript1514.chr8.nic@ARFGEF1 transcript1514.chr8.nic protein_coding 67343510,67343164,67302436,67301224,67299209,67296431,67291847,67287955,67277282,67275976,67271702,67267343,67267091,67266876,67266006,67259815,67258085,67257732,67253451,67251299,67240162,67238735,67238343,67232855,67228224,67227963,67227447,67227137,67226023,67224903,67219431,67218003,67217782,67216590,67211483,67204680,67203083,67201467,67200396,67197661 67343888,67343336,67302466,67301380,67299355,67296610,67292123,67288065,67277457,67276109,67271936,67267442,67267230,67266984,67266207,67259926,67258290,67257816,67253622,67251450,67240290,67238893,67238493,67232945,67228264,67228132,67227598,67227309,67226183,67225033,67219560,67218138,67217920,67216662,67211615,67204819,67203251,67201605,67200513,67199098 Gene ID= ENSG00000066777.8 TPM= 8.15 Transcript Type= NA chr8 70573442 70608369 70573442 70608369 - ENST00000262213.6@TRAM1 ENST00000262213.6 protein_coding 70608077,70600019,70598134,70597895,70596263,70594506,70587106,70586895,70583650,70583164,70573442 70608369,70600082,70598255,70598011,70596321,70594590,70587176,70586999,70583793,70583324,70575005 Gene ID= ENSG00000067167.7 TPM= 203.75 Transcript Type= protein_coding chr8 70637257 70669185 70637257 70669185 - transcript1529.chr8.nic@LACTB2 transcript1529.chr8.nic protein_coding 70668999,70661734,70657756,70644065,70638548,70637257 70669185,70661897,70657882,70644243,70638629,70637903 Gene ID= ENSG00000147592.8 TPM= 1.81 Transcript Type= NA chr8 70637256 70669157 70637256 70669157 - ENST00000276590.4@LACTB2 ENST00000276590.4 protein_coding 70668999,70661734,70657756,70644065,70640902,70638548,70637256 70669157,70661897,70657882,70644243,70641050,70638629,70637903 Gene ID= ENSG00000147592.8 TPM= 67.92 Transcript Type= protein_coding chr8 71841549 71844468 71841549 71844468 - ENST00000325509.4@MSC ENST00000325509.4 protein_coding 71843645,71841549 71844468,71842747 Gene ID= ENSG00000178860.8 TPM= 19.02 Transcript Type= protein_coding chr8 73008864 73048122 73008864 73048122 + ENST00000276602.10@TERF1 ENST00000276602.10 protein_coding 73008864,73013895,73020684,73022216,73024822,73026940,73032042,73039116,73045961 73009205,73013990,73020805,73022302,73024971,73027052,73032133,73039219,73048122 Gene ID= ENSG00000147601.13 TPM= 5.43 Transcript Type= protein_coding chr8 73008867 73047498 73008867 73047498 + transcript1539.chr8.nic@TERF1 transcript1539.chr8.nic protein_coding 73008867,73020684,73022216,73024822,73026940,73032042,73039116,73045961 73009205,73020805,73022302,73024971,73027052,73032133,73039219,73047498 Gene ID= ENSG00000147601.13 TPM= 1.81 Transcript Type= NA chr8 73008864 73046471 73008864 73046471 + ENST00000276603.9@TERF1 ENST00000276603.9 protein_coding 73008864,73013895,73020684,73022216,73024822,73026940,73030336,73032042,73039116,73045961 73009205,73013990,73020805,73022302,73024971,73027052,73030395,73032133,73039219,73046471 Gene ID= ENSG00000147601.13 TPM= 3.62 Transcript Type= protein_coding chr8 73064540 73093272 73064540 73093272 - ENST00000297354.6@SBSPON ENST00000297354.6 protein_coding 73092854,73081019,73071780,73069805,73064540 73093272,73081213,73071870,73069981,73067458 Gene ID= ENSG00000164764.10 TPM= 8.15 Transcript Type= protein_coding chr8 73290639 73293898 73290639 73293898 - ENST00000352983.6@RPL7 ENST00000352983.6 protein_coding 73293599,73292689,73292239,73291773,73291552,73291043,73290639 73293898,73292797,73292405,73291910,73291661,73291252,73290705 Gene ID= ENSG00000147604.13 TPM= 801.41 Transcript Type= protein_coding chr8 73420371 73746889 73420371 73746889 - transcript1548.chr8.nic@STAU2 transcript1548.chr8.nic protein_coding 73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73527691,73422614,73420371 73746889,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804,73422702,73421465 Gene ID= ENSG00000040341.17 TPM= 2.15 Transcript Type= NA chr8 73420371 73746909 73420371 73746909 - transcript1555.chr8.nic@STAU2 transcript1555.chr8.nic protein_coding 73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371 73746909,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465 Gene ID= ENSG00000040341.17 TPM= 8.48 Transcript Type= NA chr8 73526839 73746889 73526839 73746889 - transcript1557.chr8.nic@STAU2 transcript1557.chr8.nic protein_coding 73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73526839 73746889,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73527804 Gene ID= ENSG00000040341.17 TPM= 3.05 Transcript Type= NA chr8 73420371 73746899 73420371 73746899 - transcript1560.chr8.nic@STAU2 transcript1560.chr8.nic protein_coding 73746783,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371 73746899,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465 Gene ID= ENSG00000040341.17 TPM= 2.72 Transcript Type= NA chr8 73420371 73747610 73420371 73747610 - transcript1561.chr8.nic@STAU2 transcript1561.chr8.nic protein_coding 73747387,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371 73747610,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465 Gene ID= ENSG00000040341.17 TPM= 1.81 Transcript Type= NA chr8 73550159 73746878 73550159 73746878 - transcript1565.chr8.nic@STAU2 transcript1565.chr8.nic protein_coding 73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73550159 73746878,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319 Gene ID= ENSG00000040341.17 TPM= 2.15 Transcript Type= NA chr8 73549586 73747598 73549586 73747598 - transcript1568.chr8.nic@STAU2 transcript1568.chr8.nic protein_coding 73747387,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73549586 73747598,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319 Gene ID= ENSG00000040341.17 TPM= 7.24 Transcript Type= NA chr8 73549609 73746899 73549609 73746899 - transcript1569.chr8.nic@STAU2 transcript1569.chr8.nic protein_coding 73746783,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73549609 73746899,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319 Gene ID= ENSG00000040341.17 TPM= 4.53 Transcript Type= NA chr8 73420371 73746937 73420371 73746937 - ENST00000524300.5@STAU2 ENST00000524300.5 protein_coding 73746783,73739756,73738284,73709032,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73552012,73422614,73420371 73746937,73739868,73738349,73709162,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319,73422702,73421465 Gene ID= ENSG00000040341.17 TPM= 3.96 Transcript Type= protein_coding chr8 73549604 73746840 73549604 73746840 - ENST00000355780.9@STAU2 ENST00000355780.9 protein_coding 73746783,73739756,73738284,73688654,73673107,73617292,73615675,73613744,73603726,73595166,73582770,73549604 73746840,73739868,73738349,73688813,73673242,73617451,73615782,73613956,73603863,73595297,73582830,73552319 Gene ID= ENSG00000040341.17 TPM= 10.11 Transcript Type= protein_coding chr8 73786220 73878910 73786220 73878910 - ENST00000517608.5@UBE2W ENST00000517608.5 protein_coding 73878808,73830381,73825147,73810474,73805651,73786220 73878910,73830472,73825249,73810629,73805726,73794115 Gene ID= ENSG00000104343.19 TPM= 30.79 Transcript Type= protein_coding chr8 73790605 73878875 73790605 73878875 - ENST00000422906.6@UBE2W ENST00000422906.6 protein_coding 73878808,73830381,73810474,73805651,73790605 73878875,73830472,73810629,73805726,73794115 Gene ID= ENSG00000104343.19 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr8 73945616 73972154 73945616 73972154 - transcript1579.chr8.nnic@ELOC transcript1579.chr8.nnic protein_coding 73972077,73959765,73955911,73955647,73945616 73972154,73959818,73956054,73955763,73946820 Gene ID= ENSG00000154582.16 TPM= 6.34 Transcript Type= NA chr8 73945617 73972247 73945617 73972247 - ENST00000520242.5@ELOC ENST00000520242.5 protein_coding 73972077,73959765,73955911,73945617 73972247,73959818,73956054,73946820 Gene ID= ENSG00000154582.16 TPM= 84.51 Transcript Type= protein_coding chr8 73946401 73972106 73946401 73972106 - ENST00000284811.12@ELOC ENST00000284811.12 protein_coding 73972042,73959765,73955911,73946401 73972106,73959818,73956054,73946820 Gene ID= ENSG00000154582.16 TPM= 2.11 Transcript Type= protein_coding chr8 73976209 73982783 73976209 73982783 + ENST00000312184.5@TMEM70 ENST00000312184.5 protein_coding 73976209,73978756,73981155 73976491,73978861,73982783 Gene ID= ENSG00000175606.10 TPM= 59.77 Transcript Type= protein_coding chr8 73991352 74029087 73991352 74029087 + ENST00000284818.6@LY96 ENST00000284818.6 protein_coding 73991352,74004796,74010001,74026789,74028956 73991554,74004885,74010129,74026841,74029087 Gene ID= ENSG00000154589.6 TPM= 11.32 Transcript Type= protein_coding chr8 73991426 74029074 73991426 74029074 + ENST00000518893.1@LY96 ENST00000518893.1 protein_coding 73991426,74010001,74026789,74028956 73991554,74010129,74026841,74029074 Gene ID= ENSG00000154589.6 TPM= 2.26 Transcript Type= protein_coding chr8 74350382 74366876 74350382 74366876 + ENST00000220822.11@GDAP1 ENST00000220822.11 protein_coding 74350382,74351274,74360137,74361884,74362939,74363985 74350578,74351466,74360310,74361978,74363053,74366876 Gene ID= ENSG00000104381.12 TPM= 8.15 Transcript Type= protein_coding chr8 76980258 77000226 76980258 77000226 - ENST00000357039.8@PEX2 ENST00000357039.8 protein_coding 76999990,76988307,76986187,76980258 77000226,76988338,76986296,76984195 Gene ID= ENSG00000164751.14 TPM= 67.01 Transcript Type= protein_coding chr8 78666062 78719758 78666062 78719758 + transcript1606.chr8.nic@ZC2HC1A transcript1606.chr8.nic protein_coding 78666062,78675787,78678563,78686467,78689222,78697407,78698414,78711990,78715221,78717328 78666164,78675863,78678679,78686608,78689373,78697506,78698513,78712106,78715328,78719758 Gene ID= ENSG00000104427.11 TPM= 1.81 Transcript Type= NA chr8 78666047 78719765 78666047 78719765 + ENST00000263849.8@ZC2HC1A ENST00000263849.8 protein_coding 78666047,78675787,78678563,78686467,78689222,78697407,78698414,78715221,78717328 78666164,78675863,78678679,78686608,78689373,78697506,78698513,78715328,78719765 Gene ID= ENSG00000104427.11 TPM= 7.24 Transcript Type= protein_coding chr8 78732772 78805523 78732772 78805523 - ENST00000263851.8@IL7 ENST00000263851.8 protein_coding 78804913,78798072,78740002,78738504,78736474,78732772 78805523,78798208,78740082,78738635,78736527,78733832 Gene ID= ENSG00000104432.13 TPM= 1.81 Transcript Type= protein_coding chr8 79610814 79666175 79610814 79666175 + ENST00000220876.11@STMN2 ENST00000220876.11 protein_coding 79610814,79636802,79641378,79654871,79664815 79611214,79636897,79641550,79655062,79666175 Gene ID= ENSG00000104435.13 TPM= 2.72 Transcript Type= protein_coding chr8 79764010 79767863 79764010 79767863 - ENST00000354724.7@HEY1 ENST00000354724.7 protein_coding 79767575,79767219,79767009,79766651,79764010 79767863,79767294,79767092,79766732,79765771 Gene ID= ENSG00000164683.16 TPM= 5.43 Transcript Type= protein_coding chr8 79918717 80030268 79918717 80030268 - transcript1619.chr8.nnic@MRPS28 transcript1619.chr8.nnic protein_coding 80030036,80002999,79918717 80030268,80003120,79919148 Gene ID= ENSG00000147586.9 TPM= 1.81 Transcript Type= NA chr8 79918717 80030282 79918717 80030282 - transcript1622.chr8.nnic@MRPS28 transcript1622.chr8.nnic protein_coding 80030021,80002999,79918717 80030282,80003180,79919148 Gene ID= ENSG00000147586.9 TPM= 14.49 Transcript Type= NA chr8 79918717 80030290 79918717 80030290 - transcript1624.chr8.nnic@MRPS28 transcript1624.chr8.nnic protein_coding 80030054,80002999,79918717 80030290,80003180,79919148 Gene ID= ENSG00000147586.9 TPM= 14.49 Transcript Type= NA chr8 79918717 80030271 79918717 80030271 - ENST00000276585.8@MRPS28 ENST00000276585.8 protein_coding 80030036,80002999,79918717 80030271,80003180,79919148 Gene ID= ENSG00000147586.9 TPM= 62.48 Transcript Type= protein_coding chr8 80486213 80521772 80486213 80521772 + ENST00000455036.7@ZBTB10 ENST00000455036.7 protein_coding 80486213,80499494,80513910,80518403,80518782,80519223 80487782,80500382,80514008,80518579,80518954,80521772 Gene ID= ENSG00000205189.11 TPM= 12.68 Transcript Type= protein_coding chr8 80639612 80874273 80639612 80874273 - transcript1632.chr8.nic@ZNF704 transcript1632.chr8.nic protein_coding 80873544,80821374,80693004,80687226,80670503,80664815,80659585,80643035,80639612 80874273,80821615,80693107,80687458,80670603,80665082,80659689,80643129,80641477 Gene ID= ENSG00000164684.13 TPM= 1.81 Transcript Type= NA chr8 80967810 81112068 80967810 81112068 - ENST00000220597.4@PAG1 ENST00000220597.4 protein_coding 81111591,81070112,81029996,80993103,80991479,80987370,80984776,80980435,80967810 81112068,81070170,81030089,80993307,80991530,80987466,80985377,80980494,80976906 Gene ID= ENSG00000076641.4 TPM= 4.53 Transcript Type= protein_coding chr8 81701315 81721302 81701315 81721302 - transcript1650.chr8.nic@ZFAND1 transcript1650.chr8.nic protein_coding 81721249,81718182,81714987,81714804,81713918,81702969,81701315 81721302,81718224,81715114,81714895,81714039,81703124,81702889 Gene ID= ENSG00000104231.10 TPM= 2.26 Transcript Type= NA chr8 81701723 81721300 81701723 81721300 - ENST00000220669.9@ZFAND1 ENST00000220669.9 protein_coding 81721227,81718182,81717249,81714987,81714804,81713918,81702969,81701723 81721300,81718224,81717288,81715114,81714895,81714039,81703124,81702865 Gene ID= ENSG00000104231.10 TPM= 7.7 Transcript Type= protein_coding chr8 81701765 81721289 81701765 81721289 - ENST00000522520.5@ZFAND1 ENST00000522520.5 protein_coding 81721227,81718182,81714987,81714804,81713918,81702969,81701765 81721289,81718224,81715114,81714895,81714039,81703124,81702865 Gene ID= ENSG00000104231.10 TPM= 10.87 Transcript Type= protein_coding chr8 81732434 81759515 81732434 81759515 + ENST00000297265.4@CHMP4C ENST00000297265.4 protein_coding 81732434,81753064,81755370,81758142,81758480 81732816,81753241,81755484,81758295,81759515 Gene ID= ENSG00000164695.4 TPM= 21.73 Transcript Type= protein_coding chr8 81799584 81842090 81799584 81842090 - transcript1655.chr8.nic@SNX16 transcript1655.chr8.nic protein_coding 81840198,81839612,81829430,81823792,81815325,81803092,81802380,81799584 81842090,81840082,81829516,81823940,81815394,81803228,81802499,81801593 Gene ID= ENSG00000104497.13 TPM= 1.81 Transcript Type= NA chr8 84774578 84922892 84774578 84922892 + transcript1661.chr8.nic@RALYL transcript1661.chr8.nic protein_coding 84774578,84804770,84849980,84862296,84873284,84887604,84920894 84774654,84804802,84850027,84862453,84873397,84887776,84922892 Gene ID= ENSG00000184672.11 TPM= 33.96 Transcript Type= NA chr8 84774578 84921836 84774578 84921836 + transcript1664.chr8.nic@RALYL transcript1664.chr8.nic protein_coding 84774578,84804770,84849980,84862296,84873284,84920894 84774654,84804802,84850027,84862453,84873397,84921836 Gene ID= ENSG00000184672.11 TPM= 2.72 Transcript Type= NA chr8 84774578 84921836 84774578 84921836 + transcript1666.chr8.nic@RALYL transcript1666.chr8.nic protein_coding 84774578,84849980,84862296,84873284,84887604,84920894 84774654,84850027,84862453,84873397,84887776,84921836 Gene ID= ENSG00000184672.11 TPM= 5.89 Transcript Type= NA chr8 85107125 85146341 85107125 85146341 + transcript1671.chr8.nic@LRRCC1 transcript1671.chr8.nic protein_coding 85107125,85110115,85112932,85115100,85115375,85123413,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389 85107399,85110180,85113099,85115275,85115584,85123606,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146341 Gene ID= ENSG00000133739.15 TPM= 9.96 Transcript Type= NA chr8 85107215 85146077 85107215 85146077 + transcript1675.chr8.nic@LRRCC1 transcript1675.chr8.nic protein_coding 85107215,85110115,85112932,85123413,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389 85107399,85110180,85113099,85123606,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146077 Gene ID= ENSG00000133739.15 TPM= 2.72 Transcript Type= NA chr8 85107178 85146075 85107178 85146075 + transcript1676.chr8.nic@LRRCC1 transcript1676.chr8.nic protein_coding 85107178,85110115,85112932,85124792,85126689,85129175,85129919,85131760,85134847,85135789,85137464,85138035,85138338,85141382,85145389 85107399,85110180,85113099,85124939,85126837,85129379,85130058,85131961,85135032,85135963,85137627,85138243,85138475,85141517,85146075 Gene ID= ENSG00000133739.15 TPM= 6.34 Transcript Type= NA chr8 85177225 85214518 85177225 85214518 + ENST00000418930.6@E2F5 ENST00000418930.6 protein_coding 85177225,85202147,85203094,85206177,85207425,85209142,85212160,85213753 85177654,85202256,85203255,85206220,85207489,85209409,85212204,85214518 Gene ID= ENSG00000133740.10 TPM= 3.62 Transcript Type= protein_coding chr8 85214502 85220375 85214502 85220375 - ENST00000612809.4@C8orf59 ENST00000612809.4 protein_coding 85220306,85219323,85217386,85214921,85214502 85220375,85219363,85217502,85215037,85214631 Gene ID= ENSG00000176731.11 TPM= 4.53 Transcript Type= protein_coding chr8 85220566 85284074 85220566 85284074 + transcript1685.chr8.nic@CA13 transcript1685.chr8.nic protein_coding 85220566,85230085,85250740,85259421,85266608,85267902,85268472,85281230 85221125,85230200,85250937,85259539,85266703,85267964,85268627,85284074 Gene ID= ENSG00000185015.7 TPM= 1.81 Transcript Type= NA chr8 85463852 85481493 85463852 85481493 + ENST00000285379.9@CA2 ENST00000285379.9 protein_coding 85463852,85465272,85473693,85474324,85475798,85477120,85480670 85464115,85465469,85473811,85474416,85475860,85477275,85481493 Gene ID= ENSG00000104267.9 TPM= 7.24 Transcript Type= protein_coding chr8 86342719 86468353 86342719 86468353 + transcript1695.chr8.nnic@WWP1 transcript1695.chr8.nnic protein_coding 86342719,86374030,86380726,86381505,86398342,86398572,86402019,86411538,86425223,86427643,86430697,86431406,86431615,86435452,86435633,86438585,86442619,86448148,86448373,86452559,86457921,86461224,86461774,86466794 86342930,86374120,86380864,86381629,86398479,86398638,86402203,86411874,86425318,86427817,86430751,86431490,86431743,86435527,86435704,86438673,86442778,86448281,86448513,86452679,86458025,86461320,86461846,86468353 Gene ID= ENSG00000123124.13 TPM= 13.58 Transcript Type= NA chr8 86342719 86467679 86342719 86467679 + transcript1696.chr8.nnic@WWP1 transcript1696.chr8.nnic protein_coding 86342719,86374030,86380726,86381505,86402019,86411538,86425223,86427643,86430697,86431406,86431615,86435452,86435633,86438585,86442619,86448148,86448373,86452559,86457921,86461224,86461774,86466794,86467505 86342930,86374120,86380864,86381629,86402203,86411874,86425318,86427817,86430751,86431490,86431743,86435527,86435704,86438673,86442778,86448281,86448513,86452679,86458025,86461320,86461846,86467472,86467679 Gene ID= ENSG00000123124.13 TPM= 1.81 Transcript Type= NA chr8 86467113 86508655 86467113 86508655 - transcript1698.chr8.nic@RMDN1 transcript1698.chr8.nic protein_coding 86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86470218,86467113 86508655,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474953,86470410,86468707 Gene ID= ENSG00000176623.11 TPM= 1.81 Transcript Type= NA chr8 86472350 86508692 86472350 86508692 - transcript1702.chr8.nic@RMDN1 transcript1702.chr8.nic protein_coding 86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350 86508692,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474914,86474358 Gene ID= ENSG00000176623.11 TPM= 1.81 Transcript Type= NA chr8 86474981 86508669 86474981 86508669 - transcript1706.chr8.nnic@RMDN1 transcript1706.chr8.nnic protein_coding 86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474981 86508669,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86475596 Gene ID= ENSG00000176623.11 TPM= 2.72 Transcript Type= NA chr8 86472350 86508780 86472350 86508780 - ENST00000406452.7@RMDN1 ENST00000406452.7 protein_coding 86508492,86506995,86488552,86486484,86484872,86480277,86478923,86477294,86474820,86472350 86508780,86507112,86488639,86486643,86484961,86480332,86479010,86477324,86474953,86474358 Gene ID= ENSG00000176623.11 TPM= 40.75 Transcript Type= protein_coding chr8 86514418 86561503 86514418 86561503 + transcript1709.chr8.nic@CPNE3 transcript1709.chr8.nic protein_coding 86514418,86515462,86524709,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288 86514541,86515499,86524814,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561503 Gene ID= ENSG00000085719.12 TPM= 5.13 Transcript Type= NA chr8 86514418 86561503 86514418 86561503 + transcript1710.chr8.nic@CPNE3 transcript1710.chr8.nic protein_coding 86514418,86515462,86524877,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288 86514541,86515499,86524997,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561503 Gene ID= ENSG00000085719.12 TPM= 4.23 Transcript Type= NA chr8 86514427 86561498 86514427 86561498 + ENST00000517490.5@CPNE3 ENST00000517490.5 protein_coding 86514427,86515462,86528536,86528945,86531155,86532509,86537563,86540245,86544740,86546595,86547711,86548301,86551046,86551183,86554851,86556102,86558288 86514541,86515499,86528677,86529124,86531229,86532580,86537646,86540334,86544838,86546681,86547770,86548434,86551100,86551234,86554984,86556338,86561498 Gene ID= ENSG00000085719.12 TPM= 65.81 Transcript Type= protein_coding chr8 89757747 89791063 89757747 89791063 + ENST00000220751.4@RIPK2 ENST00000220751.4 protein_coding 89757747,89762829,89765341,89769772,89771741,89772667,89780075,89784050,89786593,89789321,89790079 89758233,89762982,89765496,89769929,89771790,89772828,89780160,89784139,89786686,89789482,89791063 Gene ID= ENSG00000104312.7 TPM= 9.96 Transcript Type= protein_coding chr8 89902534 89927888 89902534 89927888 + ENST00000451899.6@OSGIN2 ENST00000451899.6 protein_coding 89902534,89909567,89914077,89914555,89921080,89924503 89902837,89909721,89914213,89914746,89921171,89927888 Gene ID= ENSG00000164823.9 TPM= 39.84 Transcript Type= protein_coding chr8 89933336 90003228 89933336 90003228 - ENST00000396252.6@NBN ENST00000396252.6 protein_coding 90003112,89984917,89984525,89982722,89981953,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336 90003228,89984973,89984733,89982855,89982002,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612 Gene ID= ENSG00000104320.13 TPM= 4.83 Transcript Type= nonsense_mediated_decay chr8 89933336 89984716 89933336 89984716 - ENST00000265433.7@NBN ENST00000265433.7 protein_coding 89984525,89982722,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933336 89984716,89982855,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612 Gene ID= ENSG00000104320.13 TPM= 39.24 Transcript Type= protein_coding chr8 89933484 89984404 89933484 89984404 - ENST00000409330.5@NBN ENST00000409330.5 protein_coding 89984208,89982722,89981375,89980734,89978220,89971173,89970364,89964410,89958725,89955283,89953244,89947824,89946140,89943253,89937026,89933484 89984404,89982855,89981523,89980893,89978323,89971290,89970557,89964507,89958854,89955555,89953691,89947892,89946295,89943366,89937075,89935612 Gene ID= ENSG00000104320.13 TPM= 2.11 Transcript Type= protein_coding chr8 90001405 90052008 90001405 90052008 + ENST00000220764.6@DECR1 ENST00000220764.6 protein_coding 90001405,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838 90001561,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90052008 Gene ID= ENSG00000104325.6 TPM= 267.32 Transcript Type= protein_coding chr8 90001476 90051972 90001476 90051972 + ENST00000517597.5@DECR1 ENST00000517597.5 protein_coding 90001476,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838 90001561,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051972 Gene ID= ENSG00000104325.6 TPM= 12.22 Transcript Type= nonsense_mediated_decay chr8 90001477 90051999 90001477 90051999 + ENST00000522161.5@DECR1 ENST00000522161.5 protein_coding 90001477,90005448,90006036,90017124,90018909,90019086,90020909,90036841,90042728,90044849,90051677,90051838 90001561,90005845,90006277,90017326,90018966,90019172,90021056,90036940,90042800,90044995,90051739,90051999 Gene ID= ENSG00000104325.6 TPM= 2.44 Transcript Type= protein_coding chr8 90621995 90646083 90621995 90646083 - ENST00000458549.6@TMEM64 ENST00000458549.6 protein_coding 90645111,90631552,90621995 90646083,90631707,90625862 Gene ID= ENSG00000180694.13 TPM= 55.24 Transcript Type= protein_coding chr8 90957037 90985238 90957037 90985238 - transcript1753.chr8.nnic@C8orf88 transcript1753.chr8.nnic protein_coding 90985114,90980363,90971066,90960742,90957037 90985238,90980461,90971141,90960848,90959030 Gene ID= ENSG00000253250.2 TPM= 1.81 Transcript Type= NA chr8 90993796 91041064 90993796 91041064 - ENST00000285419.7@TMEM55A ENST00000285419.7 protein_coding 91040644,91021256,91020157,91018390,91008743,90996654,90993796 91041064,91021404,91020263,91018513,91008795,90996744,90995820 Gene ID= ENSG00000155099.7 TPM= 50.71 Transcript Type= protein_coding chr8 91067911 91070189 91067911 91070189 - ENST00000524003.1@OTUD6B-AS1 ENST00000524003.1 antisense_RNA 91069931,91067911 91070189,91069822 Gene ID= ENSG00000253738.1 TPM= 15.39 Transcript Type= antisense_RNA chr8 92883636 92966150 92883636 92966150 - transcript1768.chr8.nic@TRIQK transcript1768.chr8.nic protein_coding 92966007,92954406,92921503,92916929,92891989,92883636 92966150,92954564,92921660,92917010,92892074,92886735 Gene ID= ENSG00000205133.11 TPM= 2.72 Transcript Type= NA chr8 92883533 92966150 92883533 92966150 - transcript1771.chr8.nic@TRIQK transcript1771.chr8.nic protein_coding 92966007,92954406,92921503,92916929,92891989,92883533 92966150,92954564,92921660,92917010,92892074,92886667 Gene ID= ENSG00000205133.11 TPM= 1.81 Transcript Type= NA chr8 92883530 92966145 92883530 92966145 - ENST00000521988.5@TRIQK ENST00000521988.5 protein_coding 92966007,92954406,92916929,92891989,92883530 92966145,92954564,92917010,92892074,92886735 Gene ID= ENSG00000205133.11 TPM= 26.26 Transcript Type= protein_coding chr8 92883635 92966144 92883635 92966144 - ENST00000518748.5@TRIQK ENST00000518748.5 protein_coding 92966007,92954406,92916929,92891989,92883635 92966144,92954564,92917007,92892074,92886735 Gene ID= ENSG00000205133.11 TPM= 8.15 Transcript Type= protein_coding chr8 93700507 93731527 93700507 93731527 + ENST00000518322.5@FAM92A ENST00000518322.5 protein_coding 93700507,93701224,93703620,93704909,93708011,93709771,93718675,93726394,93728205 93700673,93701458,93703688,93705010,93708016,93709875,93718788,93726513,93731527 Gene ID= ENSG00000188343.12 TPM= 29.88 Transcript Type= protein_coding chr8 93700525 93729574 93700525 93729574 + transcript1786.chr8.nic@FAM92A transcript1786.chr8.nic protein_coding 93700525,93701224,93703620,93704909,93709771,93718675,93726394,93728205 93700673,93701458,93703688,93706196,93709875,93718788,93726513,93729574 Gene ID= ENSG00000188343.12 TPM= 8.15 Transcript Type= NA chr8 93729356 93741017 93729356 93741017 - ENST00000399300.6@RBM12B ENST00000399300.6 protein_coding 93740881,93737307,93729356 93741017,93737355,93736438 Gene ID= ENSG00000183808.11 TPM= 3.62 Transcript Type= protein_coding chr8 93754857 93818057 93754857 93818057 + ENST00000453321.7@TMEM67 ENST00000453321.7 protein_coding 93754857,93755778,93758483,93763842,93765406,93765572,93772589,93780593,93780874,93781658,93782395,93785222,93786223,93787844,93791263,93793198,93795409,93795901,93797134,93797331,93799618,93803604,93804762,93808840,93809057,93809785,93815305,93816372 93755137,93755866,93758576,93763941,93765475,93765646,93772651,93780747,93780982,93781744,93782460,93785378,93786346,93787949,93791319,93793296,93795507,93795987,93797233,93797470,93799758,93803684,93804878,93808956,93809161,93809887,93815447,93818057 Gene ID= ENSG00000164953.15 TPM= 9.06 Transcript Type= protein_coding chr8 93916855 93926062 93916855 93926062 + ENST00000297598.4@PDP1 ENST00000297598.4 protein_coding 93916855,93922016 93917079,93926062 Gene ID= ENSG00000164951.15 TPM= 56.14 Transcript Type= protein_coding chr8 94249253 94262350 94249253 94262350 - ENST00000396194.6@GEM ENST00000396194.6 protein_coding 94262205,94260173,94253036,94252019,94249253 94262350,94260512,94253112,94252223,94250587 Gene ID= ENSG00000164949.7 TPM= 4.07 Transcript Type= protein_coding chr8 94249258 94262345 94249258 94262345 - ENST00000297596.2@GEM ENST00000297596.2 protein_coding 94262090,94260173,94253036,94252019,94249258 94262345,94260512,94253112,94252223,94250587 Gene ID= ENSG00000164949.7 TPM= 16.75 Transcript Type= protein_coding chr8 94487693 94553523 94487693 94553523 - ENST00000297591.9@VIRMA ENST00000297591.9 protein_coding 94553385,94543827,94538260,94537103,94534839,94530963,94529070,94526223,94518985,94517788,94514869,94511996,94511185,94510417,94509688,94506500,94499374,94496328,94495731,94494860,94492652,94491578,94489939,94487693 94553523,94543942,94538346,94537151,94535007,94531085,94529342,94527363,94519476,94517942,94514951,94512089,94511729,94510652,94509940,94506717,94499506,94496480,94495891,94494956,94492818,94491909,94490082,94488860 Gene ID= ENSG00000164944.11 TPM= 6.34 Transcript Type= protein_coding chr8 94720060 94791844 94720060 94791844 + transcript1815.chr8.nnic@DPY19L4 transcript1815.chr8.nnic protein_coding 94720060,94726331,94734630,94738369,94739413,94739645,94756036,94761700,94765183,94765711,94766612,94768395,94770452,94777666,94780359,94781084,94783670,94787894,94789746 94720236,94726441,94734754,94738459,94739534,94739790,94756159,94761834,94765314,94765809,94766685,94768553,94770571,94777786,94780415,94781166,94783802,94788052,94791844 Gene ID= ENSG00000156162.16 TPM= 1.81 Transcript Type= NA chr8 94719917 94791844 94719917 94791844 + transcript1818.chr8.nnic@DPY19L4 transcript1818.chr8.nnic protein_coding 94719917,94726331,94738369,94739413,94739645,94761700,94765183,94765711,94766612,94768395,94770452,94777666,94780359,94781084,94783670,94787894,94789746 94720014,94726441,94738459,94739534,94739790,94761834,94765314,94765809,94766685,94768553,94770571,94777786,94780415,94781166,94783802,94788052,94791844 Gene ID= ENSG00000156162.16 TPM= 1.81 Transcript Type= NA chr8 94719690 94745082 94719690 94745082 + transcript1822.chr8.nic@DPY19L4 transcript1822.chr8.nic protein_coding 94719690,94726331,94734630,94738369,94739413,94739645,94744485 94720014,94726441,94734754,94738459,94739534,94739790,94745082 Gene ID= ENSG00000156162.16 TPM= 1.81 Transcript Type= NA chr8 94719900 94793836 94719900 94793836 + ENST00000414645.6@DPY19L4 ENST00000414645.6 protein_coding 94719900,94726331,94734630,94738369,94739413,94739645,94756036,94761700,94765183,94765711,94766612,94768395,94770452,94777666,94780359,94781084,94783670,94787894,94789746 94720014,94726441,94734754,94738459,94739534,94739790,94756159,94761834,94765314,94765809,94766685,94768553,94770571,94777786,94780415,94781166,94783802,94788052,94793836 Gene ID= ENSG00000156162.16 TPM= 10.87 Transcript Type= protein_coding chr8 94823273 94880492 94823273 94880492 + transcript1825.chr8.nic@INTS8 transcript1825.chr8.nic protein_coding 94823273,94824893,94827263,94827722,94828975,94831992,94836524,94838494,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118 94823561,94825067,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880492 Gene ID= ENSG00000164941.13 TPM= 3.02 Transcript Type= NA chr8 94823287 94880303 94823287 94880303 + transcript1827.chr8.nnic@INTS8 transcript1827.chr8.nnic protein_coding 94823287,94824893,94827263,94827722,94828975,94831992,94836524,94838463,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118 94823385,94825067,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880303 Gene ID= ENSG00000164941.13 TPM= 1.81 Transcript Type= NA chr8 94823273 94880313 94823273 94880313 + transcript1829.chr8.nnic@INTS8 transcript1829.chr8.nnic protein_coding 94823273,94824893,94827263,94827722,94828975,94831992,94836524,94838463,94841491,94842347,94849462,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118 94823561,94825067,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880313 Gene ID= ENSG00000164941.13 TPM= 2.11 Transcript Type= NA chr8 94823273 94880310 94823273 94880310 + transcript1830.chr8.nnic@INTS8 transcript1830.chr8.nnic protein_coding 94823273,94824893,94827263,94827722,94828975,94831992,94836524,94838494,94841491,94842347,94849462,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118 94823561,94825067,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880310 Gene ID= ENSG00000164941.13 TPM= 2.11 Transcript Type= NA chr8 94823274 94880321 94823274 94880321 + transcript1831.chr8.nic@INTS8 transcript1831.chr8.nic protein_coding 94823274,94827263,94827722,94828975,94831992,94836524,94838463,94841491,94842347,94849462,94849916,94851553,94853805,94856777,94859511,94865506,94866158,94867140,94867276,94871884,94873374,94874552,94876074,94876221,94876446,94880118 94823561,94827403,94827793,94829026,94832174,94836631,94838618,94841591,94842488,94849532,94850091,94851686,94853915,94856978,94859632,94865690,94866191,94867196,94867337,94872002,94873477,94874602,94876147,94876285,94876489,94880321 Gene ID= ENSG00000164941.13 TPM= 2.72 Transcript Type= NA chr8 94925972 94949366 94925972 94949366 - ENST00000448464.6@TP53INP1 ENST00000448464.6 protein_coding 94949154,94940830,94939860,94932070,94925972 94949366,94941091,94940220,94932107,94930728 Gene ID= ENSG00000164938.13 TPM= 9.06 Transcript Type= protein_coding chr8 95024988 95058716 95024988 95058716 + transcript1846.chr8.nic@NDUFAF6 transcript1846.chr8.nic protein_coding 95024988,95031995,95034008,95035454,95041570,95045545,95046994,95048457,95052174,95057809 95025205,95032098,95034122,95035576,95041626,95045647,95047127,95048558,95052230,95058716 Gene ID= ENSG00000156170.12 TPM= 1.81 Transcript Type= NA chr8 95133804 95156684 95133804 95156684 + ENST00000315367.3@PLEKHF2 ENST00000315367.3 protein_coding 95133804,95154031 95134030,95156684 Gene ID= ENSG00000175895.3 TPM= 25.36 Transcript Type= protein_coding chr8 95244919 95269201 95244919 95269201 - ENST00000286688.5@C8orf37 ENST00000286688.5 protein_coding 95269035,95263687,95260468,95259840,95252188,95244919 95269201,95263774,95260532,95259905,95252283,95247770 Gene ID= ENSG00000156172.5 TPM= 3.62 Transcript Type= protein_coding chr8 96225920 96235634 96225920 96235634 - ENST00000287022.9@UQCRB ENST00000287022.9 protein_coding 96235512,96233156,96231774,96225920 96235634,96233227,96231940,96231132 Gene ID= ENSG00000156467.9 TPM= 149.41 Transcript Type= protein_coding chr8 96239417 96261614 96239417 96261614 - transcript1858.chr8.nic@MTERF3 transcript1858.chr8.nic protein_coding 96261501,96260137,96258357,96256962,96250906,96246307,96245860,96243919,96239417 96261614,96260247,96258700,96257114,96251095,96246454,96245931,96244080,96239685 Gene ID= ENSG00000156469.8 TPM= 1.81 Transcript Type= NA chr8 96239435 96261589 96239435 96261589 - ENST00000287025.3@MTERF3 ENST00000287025.3 protein_coding 96261501,96258357,96256962,96250906,96246307,96245860,96243919,96239435 96261589,96258700,96257114,96251095,96246454,96245931,96244080,96239685 Gene ID= ENSG00000156469.8 TPM= 16.3 Transcript Type= protein_coding chr8 96261857 96335320 96261857 96335320 + transcript1862.chr8.nnic@PTDSS1 transcript1862.chr8.nnic protein_coding 96261857,96261933,96273299,96284109,96287022,96295098,96299694,96304040,96306444,96309557,96320246,96330213,96331026,96333457 96261863,96262219,96273390,96284153,96287146,96295256,96299845,96304181,96306556,96309622,96320345,96330281,96331095,96335320 Gene ID= ENSG00000156471.12 TPM= 77.42 Transcript Type= NA chr8 96261715 96336995 96261715 96336995 + ENST00000517309.5@PTDSS1 ENST00000517309.5 protein_coding 96261715,96273299,96284109,96287022,96295098,96299694,96304040,96306444,96309557,96320246,96330213,96331026,96333457 96262219,96273390,96284153,96287146,96295256,96299845,96304181,96306556,96309622,96320345,96330281,96331095,96336995 Gene ID= ENSG00000156471.12 TPM= 43.92 Transcript Type= protein_coding chr8 96493351 96611780 96493351 96611780 + ENST00000302190.8@SDC2 ENST00000302190.8 protein_coding 96493351,96593480,96602395,96608335,96609385 96494331,96593591,96602528,96608470,96611780 Gene ID= ENSG00000169439.11 TPM= 14.49 Transcript Type= protein_coding chr8 96645253 97143500 96645253 97143500 + transcript1871.chr8.nnic@CPQ transcript1871.chr8.nnic protein_coding 96645253,96784864,96834973,96879798,96961934,96965935,97029403,97066009,97143020 96645402,96785330,96835180,96880005,96962056,96966046,97029494,97066210,97143500 Gene ID= ENSG00000104324.15 TPM= 2.72 Transcript Type= NA chr8 96645291 97143500 96645291 97143500 + transcript1872.chr8.nnic@CPQ transcript1872.chr8.nnic protein_coding 96645291,96784864,96834973,96879798,96965935,97029403,97055529,97066009,97143020 96645402,96785330,96835180,96880005,96966046,97029494,97055645,97066210,97143500 Gene ID= ENSG00000104324.15 TPM= 1.81 Transcript Type= NA chr8 96645227 97143501 96645227 97143501 + ENST00000220763.9@CPQ ENST00000220763.9 protein_coding 96645227,96784864,96834973,96879798,96965935,97029403,97066009,97143020 96645402,96785330,96835180,96880005,96966046,97029494,97066210,97143501 Gene ID= ENSG00000104324.15 TPM= 67.01 Transcript Type= protein_coding chr8 97644136 97728270 97644136 97728270 + transcript1882.chr8.nic@MTDH transcript1882.chr8.nic protein_coding 97644136,97661072,97686668,97687429,97690952,97699754,97706626,97713662,97719049,97722879,97724600 97644887,97661173,97686752,97687605,97691188,97699852,97706750,97713769,97719189,97723035,97728270 Gene ID= ENSG00000147649.9 TPM= 6.41 Transcript Type= NA chr8 97644184 97728270 97644184 97728270 + transcript1883.chr8.nnic@MTDH transcript1883.chr8.nnic protein_coding 97644184,97686668,97687429,97689038,97690952,97699754,97706626,97713662,97719049,97722879,97724600 97644887,97686752,97687605,97689103,97691188,97699852,97706750,97713769,97719189,97723035,97728270 Gene ID= ENSG00000147649.9 TPM= 5.51 Transcript Type= NA chr8 97775057 97853013 97775057 97853013 + ENST00000445593.6@LAPTM4B ENST00000445593.6 protein_coding 97775057,97805353,97815328,97816058,97819140,97825058,97851397 97776108,97805464,97815401,97816180,97819238,97825153,97853013 Gene ID= ENSG00000104341.16 TPM= 167.53 Transcript Type= protein_coding chr8 97869083 98036716 97869083 98036716 + ENST00000254898.6@MATN2 ENST00000254898.6 protein_coding 97869083,97888075,97930953,97941777,97961408,97978886,97994480,98003661,98007105,98007479,98016540,98017994,98021205,98027416,98030462,98032246,98033042,98033561,98035657 97869287,97888242,97931522,97941899,97961530,97979008,97994602,98003783,98007227,98007601,98016662,98018116,98021327,98027829,98030614,98032317,98033176,98033659,98036716 Gene ID= ENSG00000132561.13 TPM= 91.46 Transcript Type= protein_coding chr8 98041721 98045590 98041721 98045590 - ENST00000287038.7@RPL30 ENST00000287038.7 protein_coding 98045508,98045347,98044943,98042645,98041721 98045590,98045399,98045088,98042775,98041850 Gene ID= ENSG00000156482.10 TPM= 340.78 Transcript Type= protein_coding chr8 98041721 98045544 98041721 98045544 - ENST00000396070.6@RPL30 ENST00000396070.6 protein_coding 98045508,98045347,98044943,98042645,98041721 98045544,98045399,98045088,98042718,98041850 Gene ID= ENSG00000156482.10 TPM= 8.9 Transcript Type= protein_coding chr8 98041721 98045514 98041721 98045514 - ENST00000521291.5@RPL30 ENST00000521291.5 protein_coding 98045347,98044943,98042645,98041721 98045514,98045088,98042775,98041850 Gene ID= ENSG00000156482.10 TPM= 16.6 Transcript Type= protein_coding chr8 98102344 98117241 98102344 98117241 - ENST00000254878.7@RIDA ENST00000254878.7 protein_coding 98117032,98108646,98106272,98105938,98104489,98102344 98117241,98108751,98106326,98106006,98104544,98102904 Gene ID= ENSG00000132541.10 TPM= 56.14 Transcript Type= protein_coding chr8 98117312 98159834 98117312 98159834 + ENST00000401707.6@POP1 ENST00000401707.6 protein_coding 98117312,98123336,98127595,98128365,98129978,98133949,98134472,98136482,98136861,98140078,98140769,98146568,98148815,98150485,98156050,98157617 98117390,98123479,98127762,98128540,98130226,98134036,98134659,98136738,98136954,98140189,98140888,98146683,98149006,98150639,98156412,98159834 Gene ID= ENSG00000104356.10 TPM= 2.72 Transcript Type= protein_coding chr8 98579185 98825722 98579185 98825722 - transcript1924.chr8.nic@STK3 transcript1924.chr8.nic protein_coding 98825515,98774739,98767243,98749276,98707147,98706467,98596032,98579185 98825722,98774819,98767371,98749390,98707311,98706634,98596169,98579789 Gene ID= ENSG00000104375.15 TPM= 6.34 Transcript Type= NA chr8 98454633 98825681 98454633 98825681 - ENST00000419617.6@STK3 ENST00000419617.6 protein_coding 98825515,98774739,98767243,98749276,98707147,98706467,98596032,98579664,98547969,98526742,98454633 98825681,98774819,98767371,98749390,98707311,98706634,98596169,98579789,98548161,98526917,98456000 Gene ID= ENSG00000104375.15 TPM= 50.71 Transcript Type= protein_coding chr8 98944442 98952104 98944442 98952104 + ENST00000297565.8@OSR2 ENST00000297565.8 protein_coding 98944442,98948839,98950656,98951519 98944823,98949608,98950755,98952104 Gene ID= ENSG00000164920.9 TPM= 13.58 Transcript Type= protein_coding chr8 98944458 98952100 98944458 98952100 + ENST00000435298.6@OSR2 ENST00000435298.6 protein_coding 98944458,98948839,98950656,98951601 98944823,98949608,98950755,98952100 Gene ID= ENSG00000164920.9 TPM= 24.45 Transcript Type= protein_coding chr8 98996763 99013044 98996763 99013044 - ENST00000521696.1@AC104986.2 ENST00000521696.1 lincRNA 99012869,98996763 99013044,98996966 Gene ID= ENSG00000253948.1 TPM= 19.02 Transcript Type= lincRNA chr8 99877866 99894062 99877866 99894062 - ENST00000520468.6@COX6C ENST00000520468.6 protein_coding 99893639,99891908,99887490,99877866 99894062,99892052,99887618,99878265 Gene ID= ENSG00000164919.10 TPM= 213.55 Transcript Type= protein_coding chr8 99878149 99893622 99878149 99893622 - ENST00000520271.5@COX6C ENST00000520271.5 protein_coding 99893443,99891908,99887490,99878149 99893622,99892052,99887618,99878265 Gene ID= ENSG00000164919.10 TPM= 6.64 Transcript Type= protein_coding chr8 100150584 100154002 100150584 100154002 + ENST00000353107.7@POLR2K ENST00000353107.7 protein_coding 100150584,100151347,100151824,100153294 100150709,100151416,100151916,100154002 Gene ID= ENSG00000147669.10 TPM= 56.14 Transcript Type= protein_coding chr8 100520767 100559739 100520767 100559739 - transcript1945.chr8.nic@ANKRD46 transcript1945.chr8.nic protein_coding 100559532,100533209,100532356,100529523,100527845,100520767 100559739,100533311,100532460,100529860,100528003,100522771 Gene ID= ENSG00000186106.11 TPM= 2.49 Transcript Type= NA chr8 100520767 100559739 100520767 100559739 - transcript1948.chr8.nic@ANKRD46 transcript1948.chr8.nic protein_coding 100559532,100533209,100529523,100527845,100520767 100559739,100533311,100529860,100528003,100522771 Gene ID= ENSG00000186106.11 TPM= 21.05 Transcript Type= NA chr8 100520772 100559759 100520772 100559759 - ENST00000335659.7@ANKRD46 ENST00000335659.7 protein_coding 100559711,100533209,100529523,100527845,100520772 100559759,100533311,100529860,100528003,100522771 Gene ID= ENSG00000186106.11 TPM= 43.69 Transcript Type= protein_coding chr8 100520772 100559784 100520772 100559784 - ENST00000519597.5@ANKRD46 ENST00000519597.5 protein_coding 100559711,100533209,100532356,100529523,100527845,100520772 100559784,100533311,100532460,100529860,100528003,100522771 Gene ID= ENSG00000186106.11 TPM= 2.49 Transcript Type= protein_coding chr8 100702916 100722712 100702916 100722712 - ENST00000318607.9@PABPC1 ENST00000318607.9 protein_coding 100721391,100718087,100717773,100715462,100713087,100712652,100712362,100709459,100709133,100706887,100706651,100705589,100704926,100704297,100702916 100722712,100718280,100717888,100715601,100713181,100712789,100712457,100709731,100709223,100706997,100706805,100705673,100705056,100704390,100703359 Gene ID= ENSG00000070756.15 TPM= 272.57 Transcript Type= protein_coding chr8 100918577 100952129 100918577 100952129 - ENST00000395958.5@YWHAZ ENST00000395958.5 protein_coding 100951929,100948596,100924916,100924135,100923955,100918577 100952129,100948900,100925039,100924298,100924050,100920752 Gene ID= ENSG00000164924.17 TPM= 222.76 Transcript Type= protein_coding chr8 100918579 100952993 100918579 100952993 - ENST00000457309.2@YWHAZ ENST00000457309.2 protein_coding 100952850,100948596,100924916,100924135,100923955,100918579 100952993,100948900,100925039,100924298,100924050,100920752 Gene ID= ENSG00000164924.17 TPM= 25.36 Transcript Type= protein_coding chr8 100918683 100951449 100918683 100951449 - ENST00000395956.7@YWHAZ ENST00000395956.7 protein_coding 100951235,100948596,100924916,100924135,100923955,100918683 100951449,100948900,100925039,100924298,100924050,100920752 Gene ID= ENSG00000164924.17 TPM= 19.02 Transcript Type= protein_coding chr8 100918686 100953341 100918686 100953341 - ENST00000353245.7@YWHAZ ENST00000353245.7 protein_coding 100953269,100948596,100924916,100924135,100923955,100918686 100953341,100948900,100925039,100924298,100924050,100920752 Gene ID= ENSG00000164924.17 TPM= 15.39 Transcript Type= protein_coding chr8 101197052 101205616 101197052 101205616 - ENST00000311212.8@ZNF706 ENST00000311212.8 protein_coding 101205435,101201607,101199990,101197052 101205616,101201743,101200097,101199239 Gene ID= ENSG00000120963.11 TPM= 79.69 Transcript Type= protein_coding chr8 101198939 101205732 101198939 101205732 - ENST00000519882.5@ZNF706 ENST00000519882.5 protein_coding 101205435,101202333,101201607,101199990,101198939 101205732,101202447,101201743,101200097,101199239 Gene ID= ENSG00000120963.11 TPM= 1.81 Transcript Type= protein_coding chr8 101686549 102124273 101686549 102124273 - transcript1985.chr8.nic@NCALD transcript1985.chr8.nic protein_coding 102124237,102020237,101915809,101852572,101719252,101692791,101686549 102124273,102020289,101915858,101852670,101719648,101692896,101689406 Gene ID= ENSG00000104490.17 TPM= 1.81 Transcript Type= NA chr8 102204502 102238600 102204502 102238600 - transcript1989.chr8.nic@RRM2B transcript1989.chr8.nic protein_coding 102238441,102232149,102225918,102224885,102224046,102218814,102214054,102212776,102204502 102238600,102232304,102226034,102225018,102224140,102218947,102214158,102212889,102208285 Gene ID= ENSG00000048392.11 TPM= 3.62 Transcript Type= NA chr8 102204502 102239118 102204502 102239118 - ENST00000251810.7@RRM2B ENST00000251810.7 protein_coding 102238827,102232149,102225918,102224885,102224046,102218814,102214054,102212776,102204502 102239118,102232304,102226034,102225018,102224140,102218947,102214158,102212889,102208285 Gene ID= ENSG00000048392.11 TPM= 59.77 Transcript Type= protein_coding chr8 102253012 102412841 102253012 102412841 - ENST00000520539.5@UBR5 ENST00000520539.5 protein_coding 102412173,102361582,102361125,102360589,102360071,102346903,102346236,102345396,102342473,102329283,102329090,102327742,102326546,102323311,102314744,102313804,102312342,102312134,102311735,102311299,102305085,102304043,102300000,102299452,102298848,102298392,102297458,102296893,102295636,102295414,102295204,102294982,102293955,102293605,102289453,102288155,102287433,102286360,102285513,102285127,102281289,102280394,102279036,102278826,102276972,102275708,102275521,102272529,102271134,102270039,102268978,102266947,102265100,102264474,102261915,102261146,102258985,102257632,102253012 102412841,102361626,102361206,102360665,102360190,102347092,102346395,102345545,102342684,102329399,102329200,102327896,102326663,102323495,102314853,102313916,102312485,102312245,102311889,102311496,102305295,102304169,102300151,102299547,102298971,102298489,102297606,102296984,102295782,102295532,102295330,102295111,102294115,102293844,102289576,102288266,102287564,102286617,102285781,102285338,102281519,102280467,102279208,102278939,102277192,102275828,102275619,102272772,102271245,102270183,102269108,102267007,102265278,102264558,102262070,102261259,102259129,102257717,102254514 Gene ID= ENSG00000104517.12 TPM= 4.53 Transcript Type= protein_coding chr8 102648779 102655902 102648779 102655902 - ENST00000285407.10@KLF10 ENST00000285407.10 protein_coding 102655566,102652164,102651149,102648779 102655902,102652397,102652061,102650391 Gene ID= ENSG00000155090.14 TPM= 30.79 Transcript Type= protein_coding chr8 102827598 102864168 102827598 102864168 - transcript2004.chr8.nnic@AZIN1 transcript2004.chr8.nnic protein_coding 102863807,102858013,102849999,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829427,102827598 102864168,102858150,102850144,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828585 Gene ID= ENSG00000155096.13 TPM= 3.62 Transcript Type= NA chr8 102826357 102864737 102826357 102864737 - ENST00000337198.9@AZIN1 ENST00000337198.9 protein_coding 102863807,102858013,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829272,102826357 102864737,102858150,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828678 Gene ID= ENSG00000155096.13 TPM= 74.25 Transcript Type= protein_coding chr8 102827823 102864193 102827823 102864193 - ENST00000347770.8@AZIN1 ENST00000347770.8 protein_coding 102863807,102858013,102849999,102843551,102839650,102838744,102836256,102834666,102834189,102833056,102829821,102829272,102827823 102864193,102858150,102850144,102843747,102839823,102838916,102836390,102834747,102834263,102833218,102829936,102829486,102828678 Gene ID= ENSG00000155096.13 TPM= 16.3 Transcript Type= protein_coding chr8 102864302 102885344 102864302 102885344 + transcript2011.chr8.nnic@AZIN1-AS1 transcript2011.chr8.nnic antisense_RNA 102864302,102879895,102885097 102864623,102880058,102885344 Gene ID= ENSG00000253320.5 TPM= 1.81 Transcript Type= NA chr8 103021102 103069565 103021102 103069565 + ENST00000518738.1@ATP6V1C1 ENST00000518738.1 protein_coding 103021102,103040798,103042340,103048870,103051050,103052731,103053884,103055868,103062955,103063135,103064714,103066321,103068652 103021225,103040968,103042407,103048955,103051144,103052822,103053982,103055936,103063047,103063228,103064811,103066447,103069565 Gene ID= ENSG00000155097.11 TPM= 85.12 Transcript Type= protein_coding chr8 103140716 103230304 103140716 103230304 + transcript2027.chr8.nnic@BAALC transcript2027.chr8.nnic protein_coding 103140716,103183367,103212919,103227989 103141057,103183471,103213085,103230304 Gene ID= ENSG00000164929.16 TPM= 4.23 Transcript Type= NA chr8 103140710 103230304 103140710 103230304 + ENST00000309982.9@BAALC ENST00000309982.9 protein_coding 103140710,103212919,103227989 103141057,103213085,103230304 Gene ID= ENSG00000164929.16 TPM= 63.09 Transcript Type= protein_coding chr8 103140713 103230305 103140713 103230305 + ENST00000438105.2@BAALC ENST00000438105.2 protein_coding 103140713,103227989 103141057,103230305 Gene ID= ENSG00000164929.16 TPM= 10.57 Transcript Type= protein_coding chr8 103264631 103298835 103264631 103298835 - transcript2032.chr8.nic@BAALC-AS1 transcript2032.chr8.nic antisense_RNA 103298349,103285838,103268391,103264631 103298835,103285902,103268472,103267520 Gene ID= ENSG00000247081.7 TPM= 1.81 Transcript Type= NA chr8 103298779 103328483 103298779 103328483 + transcript2024.chr8.nic@FZD6 transcript2024.chr8.nic protein_coding 103298779,103299956,103318590,103324481,103328268 103298995,103300284,103318786,103325498,103328483 Gene ID= ENSG00000164930.11 TPM= 2.72 Transcript Type= NA chr8 103298779 103327781 103298779 103327781 + transcript2033.chr8.nic@FZD6 transcript2033.chr8.nic protein_coding 103298779,103299956,103318590,103324481 103298995,103300284,103318786,103327781 Gene ID= ENSG00000164930.11 TPM= 3.62 Transcript Type= NA chr8 103298831 103332859 103298831 103332859 + ENST00000358755.4@FZD6 ENST00000358755.4 protein_coding 103298831,103299956,103318590,103324481,103328268,103329655,103331341 103298995,103300284,103318786,103325498,103328416,103330065,103332859 Gene ID= ENSG00000164930.11 TPM= 26.71 Transcript Type= protein_coding chr8 103298831 103332866 103298831 103332866 + ENST00000522484.5@FZD6 ENST00000522484.5 protein_coding 103298831,103299956,103318590,103324481,103329655,103331341 103298995,103300284,103318786,103325498,103330065,103332866 Gene ID= ENSG00000164930.11 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr8 103371515 103382997 103371515 103382997 + ENST00000330295.9@CTHRC1 ENST00000330295.9 protein_coding 103371515,103375738,103378027,103382458 103371806,103375959,103378243,103382997 Gene ID= ENSG00000164932.12 TPM= 7.24 Transcript Type= protein_coding chr8 103398635 103415104 103398635 103415104 - ENST00000297578.8@SLC25A32 ENST00000297578.8 protein_coding 103414784,103407634,103404776,103403164,103401941,103401516,103398635 103415104,103407784,103404861,103403324,103402054,103401661,103400546 Gene ID= ENSG00000164933.11 TPM= 12.68 Transcript Type= protein_coding chr8 104195874 104230782 104195874 104230782 + transcript2059.chr8.nnic@RIMS2 transcript2059.chr8.nnic protein_coding 104195874,104198625,104200606,104229800 104198171,104198827,104200738,104230782 Gene ID= ENSG00000176406.22 TPM= 3.17 Transcript Type= NA chr8 104195875 104230782 104195875 104230782 + transcript2063.chr8.nnic@RIMS2 transcript2063.chr8.nnic protein_coding 104195875,104200606,104229800 104198827,104200738,104230782 Gene ID= ENSG00000176406.22 TPM= 4.98 Transcript Type= NA chr8 104379426 104438184 104379426 104438184 - transcript2065.chr8.nnic@DPYS transcript2065.chr8.nnic protein_coding 104438065,104429545,104427980,104424247,104392784,104379426 104438184,104429701,104428121,104424389,104392991,104381314 Gene ID= ENSG00000147647.12 TPM= 1.81 Transcript Type= NA chr8 104379425 104411920 104379425 104411920 - transcript2067.chr8.nic@DPYS transcript2067.chr8.nic protein_coding 104411749,104392784,104381184,104379425 104411920,104392991,104381314,104379843 Gene ID= ENSG00000147647.12 TPM= 13.58 Transcript Type= NA chr8 104379425 104381821 104379425 104381821 - transcript2068.chr8.nnic@DPYS transcript2068.chr8.nnic protein_coding 104381647,104381184,104379425 104381821,104381314,104379843 Gene ID= ENSG00000147647.12 TPM= 1.81 Transcript Type= NA chr8 104379425 104411837 104379425 104411837 - transcript2069.chr8.nnic@DPYS transcript2069.chr8.nnic protein_coding 104411749,104381184,104379425 104411837,104381314,104379843 Gene ID= ENSG00000147647.12 TPM= 1.81 Transcript Type= NA chr8 104379426 104411866 104379426 104411866 - transcript2070.chr8.nic@DPYS transcript2070.chr8.nic protein_coding 104411749,104392784,104379426 104411866,104392991,104379843 Gene ID= ENSG00000147647.12 TPM= 1.81 Transcript Type= NA chr8 104418715 104431453 104418715 104431453 + transcript2072.chr8.nnic@NA transcript2072.chr8.nnic NA 104418715,104428298,104429404 104419575,104428724,104431453 Gene ID= novel_gene_chr8_2073 TPM= 1.81 Transcript Type= NA chr8 104489250 104589006 104489250 104589006 - ENST00000276654.9@LRP12 ENST00000276654.9 protein_coding 104588819,104531907,104508939,104499317,104496972,104495077,104489250 104589006,104531963,104509074,104499519,104498076,104495209,104491539 Gene ID= ENSG00000147650.11 TPM= 5.43 Transcript Type= protein_coding chr8 104489231 104589024 104489231 104589024 - ENST00000424843.6@LRP12 ENST00000424843.6 protein_coding 104588819,104508939,104499317,104496972,104495077,104489231 104589024,104509074,104499519,104498076,104495209,104491539 Gene ID= ENSG00000147650.11 TPM= 5.43 Transcript Type= protein_coding chr8 106270167 106752693 106270167 106752693 + transcript2083.chr8.nnic@OXR1 transcript2083.chr8.nnic protein_coding 106270167,106359476,106518943,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806 106270367,106359636,106519139,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752693 Gene ID= ENSG00000164830.18 TPM= 3.24 Transcript Type= NA chr8 106270249 106752693 106270249 106752693 + transcript2084.chr8.nnic@OXR1 transcript2084.chr8.nnic protein_coding 106270249,106359476,106518943,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806 106270367,106359636,106519139,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752693 Gene ID= ENSG00000164830.18 TPM= 2.94 Transcript Type= NA chr8 106617944 106752693 106617944 106752693 + transcript2088.chr8.nic@OXR1 transcript2088.chr8.nic protein_coding 106617944,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806 106618183,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752693 Gene ID= ENSG00000164830.18 TPM= 15.92 Transcript Type= NA chr8 106657582 106752693 106657582 106752693 + transcript2090.chr8.nic@OXR1 transcript2090.chr8.nic protein_coding 106657582,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106737520,106739458,106740343,106742222,106745789,106750806 106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106737600,106739583,106740495,106742317,106745862,106752693 Gene ID= ENSG00000164830.18 TPM= 19.54 Transcript Type= NA chr8 106617884 106752693 106617884 106752693 + transcript2092.chr8.nic@OXR1 transcript2092.chr8.nic protein_coding 106617884,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806 106618183,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752693 Gene ID= ENSG00000164830.18 TPM= 19.24 Transcript Type= NA chr8 106657667 106752693 106657667 106752693 + transcript2095.chr8.nic@OXR1 transcript2095.chr8.nic protein_coding 106657667,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806 106658085,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752693 Gene ID= ENSG00000164830.18 TPM= 3.85 Transcript Type= NA chr8 106657854 106752694 106657854 106752694 + ENST00000312046.10@OXR1 ENST00000312046.10 protein_coding 106657854,106679210,106683199,106684246,106692728,106702906,106706382,106710622,106713823,106739458,106740343,106742222,106745789,106750806 106658185,106679292,106683306,106684359,106692877,106703090,106707145,106710790,106713985,106739583,106740495,106742317,106745862,106752694 Gene ID= ENSG00000164830.18 TPM= 21.96 Transcript Type= protein_coding chr8 107249482 107498010 107249482 107498010 - ENST00000517746.5@ANGPT1 ENST00000517746.5 protein_coding 107497262,107346942,107336150,107321896,107303240,107293936,107284682,107264221,107249482 107498010,107347097,107336271,107322128,107303367,107294037,107284848,107264351,107252015 Gene ID= ENSG00000154188.9 TPM= 6.34 Transcript Type= protein_coding chr8 108201743 108248765 108201743 108248765 - ENST00000220849.9@EIF3E ENST00000220849.9 protein_coding 108248613,108241799,108239958,108236161,108234998,108229070,108228267,108217334,108216412,108214607,108203401,108202983,108201743 108248765,108241913,108240075,108236203,108235102,108229195,108228391,108217460,108216513,108214716,108203503,108203117,108201923 Gene ID= ENSG00000104408.9 TPM= 219.44 Transcript Type= protein_coding chr8 108233394 108248698 108233394 108248698 - ENST00000521440.5@EIF3E ENST00000521440.5 protein_coding 108248613,108241799,108239958,108236161,108234998,108233394 108248698,108241913,108240075,108236203,108235102,108233672 Gene ID= ENSG00000104408.9 TPM= 1.81 Transcript Type= protein_coding chr8 108443624 108486912 108443624 108486912 + ENST00000220853.7@EMC2 ENST00000220853.7 protein_coding 108443624,108449823,108450428,108453062,108455873,108469826,108470062,108475882,108476782,108479006,108486512 108443698,108449936,108450492,108453147,108455930,108469911,108470121,108475963,108476892,108479110,108486912 Gene ID= ENSG00000104412.7 TPM= 53.43 Transcript Type= protein_coding chr8 109334324 109343664 109334324 109343664 + ENST00000521662.5@ENY2 ENST00000521662.5 protein_coding 109334324,109336128,109339320,109340489,109343405 109334402,109336204,109339390,109340563,109343664 Gene ID= ENSG00000120533.12 TPM= 12.68 Transcript Type= protein_coding chr8 109464914 109532685 109464914 109532685 + transcript2124.chr8.nnic@PKHD1L1 transcript2124.chr8.nnic protein_coding 109464914,109466578,109475118,109476508,109477225,109479551,109479991,109481433,109482987,109485044,109486648,109489952,109490972,109491873,109493661,109496919,109497150,109498462,109498655,109504327,109507663,109508097,109510777,109515170,109518167,109522186,109522744,109523233,109526784,109530634 109465245,109466769,109475269,109476667,109477396,109479639,109480139,109481562,109483105,109485173,109486821,109490055,109491101,109491994,109493751,109497067,109497272,109498573,109498771,109504492,109507895,109508264,109510934,109515305,109518508,109522337,109522890,109523386,109527020,109532685 Gene ID= ENSG00000205038.11 TPM= 1.81 Transcript Type= NA chr8 109539711 109565160 109539711 109565160 + ENST00000395785.6@EBAG9 ENST00000395785.6 protein_coding 109539711,109550810,109553865,109554729,109556935,109560838,109564439 109539919,109550907,109553943,109554887,109557042,109560929,109565160 Gene ID= ENSG00000147654.14 TPM= 32.6 Transcript Type= protein_coding chr8 109573981 109645278 109573981 109645278 - transcript2132.chr8.nic@SYBU transcript2132.chr8.nic protein_coding 109644636,109642728,109618842,109586060,109579799,109577868,109573981 109645278,109642929,109619039,109586162,109580002,109578017,109576013 Gene ID= ENSG00000147642.16 TPM= 85.03 Transcript Type= NA chr8 109574186 109644817 109574186 109644817 - ENST00000276646.13@SYBU ENST00000276646.13 protein_coding 109644636,109642728,109618842,109586060,109579799,109577868,109574186 109644817,109642932,109619039,109586162,109580002,109578017,109576013 Gene ID= ENSG00000147642.16 TPM= 186 Transcript Type= protein_coding chr8 109574206 109644817 109574206 109644817 - ENST00000533065.5@SYBU ENST00000533065.5 protein_coding 109644636,109618842,109586060,109579799,109577868,109574206 109644817,109619039,109586162,109580002,109578017,109576013 Gene ID= ENSG00000147642.16 TPM= 29.34 Transcript Type= protein_coding chr8 109574186 109645517 109574186 109645517 - ENST00000528647.5@SYBU ENST00000528647.5 protein_coding 109645289,109644636,109642728,109618842,109586060,109579799,109577868,109574186 109645517,109644716,109642929,109619039,109586162,109580002,109578017,109576013 Gene ID= ENSG00000147642.16 TPM= 7.15 Transcript Type= protein_coding chr8 116642130 116755821 116642130 116755821 - ENST00000521861.5@EIF3H ENST00000521861.5 protein_coding 116755666,116726016,116658813,116657215,116655856,116648806,116646471,116642130 116755821,116726172,116658980,116657314,116656005,116648926,116646603,116645103 Gene ID= ENSG00000147677.10 TPM= 136.28 Transcript Type= protein_coding chr8 116766503 116774690 116766503 116774690 + ENST00000309822.6@UTP23 ENST00000309822.6 protein_coding 116766503,116770192,116771456 116766791,116770366,116774690 Gene ID= ENSG00000147679.11 TPM= 10.87 Transcript Type= protein_coding chr8 116845933 116874522 116845933 116874522 - transcript2158.chr8.nic@RAD21 transcript2158.chr8.nic protein_coding 116874363,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845933 116874522,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691 Gene ID= ENSG00000164754.14 TPM= 23.84 Transcript Type= NA chr8 116845935 116874866 116845935 116874866 - ENST00000297338.6@RAD21 ENST00000297338.6 protein_coding 116874611,116866586,116863130,116861841,116858352,116857267,116856646,116856166,116854245,116852549,116851948,116850618,116848946,116845935 116874866,116866761,116863259,116861940,116858458,116857473,116856771,116856288,116854468,116852708,116852096,116850767,116849029,116847691 Gene ID= ENSG00000164754.14 TPM= 130.7 Transcript Type= protein_coding chr8 117520713 117540262 117520713 117540262 + ENST00000297347.7@MED30 ENST00000297347.7 protein_coding 117520713,117528651,117530723,117539883 117521053,117528809,117530827,117540262 Gene ID= ENSG00000164758.7 TPM= 12.68 Transcript Type= protein_coding chr8 117794490 118111853 117794490 118111853 - ENST00000378204.6@EXT1 ENST00000378204.6 protein_coding 118110085,117837108,117835444,117830230,117822465,117819676,117818435,117812872,117807217,117804722,117794490 118111853,117837201,117835551,117830349,117822597,117819794,117818530,117812961,117807377,117804893,117799897 Gene ID= ENSG00000182197.10 TPM= 8.15 Transcript Type= protein_coding chr8 118923557 118952200 118923557 118952200 - ENST00000297350.8@TNFRSF11B ENST00000297350.8 protein_coding 118951792,118932931,118928738,118926494,118923557 118952200,118933300,118928929,118926718,118924762 Gene ID= ENSG00000164761.8 TPM= 9.96 Transcript Type= protein_coding chr8 119208371 119245673 119208371 119245673 + ENST00000614891.4@MAL2 ENST00000614891.4 protein_coding 119208371,119221587,119240165,119243417 119208604,119221757,119240320,119245673 Gene ID= ENSG00000147676.13 TPM= 1.81 Transcript Type= protein_coding chr8 119416306 119424353 119416306 119424353 + ENST00000259526.3@NOV ENST00000259526.3 protein_coding 119416306,119416744,119418058,119419131,119422836 119416616,119416969,119418309,119419345,119424353 Gene ID= ENSG00000136999.4 TPM= 959.88 Transcript Type= protein_coding chr8 119416450 119417120 119416450 119417120 + ENST00000520082.1@NOV ENST00000520082.1 protein_coding 119416450,119416744 119416616,119417120 Gene ID= ENSG00000136999.4 TPM= 24.45 Transcript Type= retained_intron chr8 119557081 119673735 119557081 119673735 - transcript2189.chr8.nic@ENPP2 transcript2189.chr8.nic protein_coding 119673252,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119593752,119590505,119587044,119586186,119583962,119583717,119582418,119580116,119570705,119569235,119568175,119564823,119562857,119557081 119673735,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691 Gene ID= ENSG00000136960.12 TPM= 5.43 Transcript Type= NA chr8 119557081 119638870 119557081 119638870 - transcript2191.chr8.nic@ENPP2 transcript2191.chr8.nic protein_coding 119638748,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119593752,119590505,119587044,119586186,119583962,119583717,119582430,119580116,119570705,119569235,119568175,119564823,119562857,119557081 119638870,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691 Gene ID= ENSG00000136960.12 TPM= 28.07 Transcript Type= NA chr8 119557086 119638830 119557086 119638830 - ENST00000259486.10@ENPP2 ENST00000259486.10 protein_coding 119638748,119638425,119626565,119621394,119619244,119617466,119617164,119616265,119607922,119601397,119600678,119595847,119593752,119590505,119587044,119586186,119583962,119583717,119582418,119580116,119570705,119569235,119568175,119564823,119562857,119557086 119638830,119638527,119626720,119621519,119619304,119617563,119617243,119616384,119607977,119601462,119600750,119596002,119593860,119590630,119587075,119586313,119584049,119583804,119582602,119580167,119570841,119569370,119568252,119564955,119563013,119557691 Gene ID= ENSG00000136960.12 TPM= 2.72 Transcript Type= protein_coding chr8 119730775 119832863 119730775 119832863 - ENST00000378164.6@TAF2 ENST00000378164.6 protein_coding 119832482,119831677,119819346,119806283,119803878,119801794,119797662,119796990,119795532,119793366,119791324,119789592,119788790,119788338,119785201,119783381,119781053,119778019,119762415,119760599,119758073,119756006,119746705,119744288,119742534,119730775 119832863,119831731,119819506,119806401,119804019,119802025,119797846,119797103,119795631,119793451,119791459,119789746,119788904,119788447,119785266,119783633,119781193,119778129,119762608,119760738,119758142,119756115,119746934,119744393,119742656,119732186 Gene ID= ENSG00000064313.11 TPM= 10.41 Transcript Type= protein_coding chr8 119730773 119832851 119730773 119832851 - transcript2202.chr8.nnic@TAF2 transcript2202.chr8.nnic protein_coding 119832482,119831677,119819346,119806283,119803878,119801794,119797662,119796990,119795532,119793366,119791324,119789592,119788790,119788338,119785201,119783381,119781053,119762415,119760599,119758073,119756006,119746705,119744288,119742534,119730773 119832851,119831731,119819506,119806401,119804019,119802025,119797846,119797103,119795631,119793451,119791459,119789746,119788904,119788447,119785266,119783633,119781193,119762608,119760738,119758142,119756115,119746934,119744393,119742656,119732186 Gene ID= ENSG00000064313.11 TPM= 3.17 Transcript Type= NA chr8 119833976 119856010 119833976 119856010 - ENST00000313655.4@DSCC1 ENST00000313655.4 protein_coding 119855614,119853047,119850382,119846990,119843609,119842776,119841794,119838259,119833976 119856010,119853215,119850516,119847080,119843747,119842828,119841948,119838407,119835001 Gene ID= ENSG00000136982.5 TPM= 5.43 Transcript Type= protein_coding chr8 119873684 119930154 119873684 119930154 + transcript2214.chr8.nic@DEPTOR transcript2214.chr8.nic protein_coding 119873684,119928400,119929815 119873968,119928578,119930154 Gene ID= ENSG00000155792.9 TPM= 9.06 Transcript Type= NA chr8 119873717 120050913 119873717 120050913 + ENST00000286234.5@DEPTOR ENST00000286234.5 protein_coding 119873717,119928400,119929815,119965232,120001525,120002977,120006805,120009029,120049576 119873968,119928578,119929938,119965410,120001710,120003111,120006875,120009133,120050913 Gene ID= ENSG00000155792.9 TPM= 127.68 Transcript Type= protein_coding chr8 120125108 120372036 120125108 120372036 + ENST00000297848.7@COL14A1 ENST00000297848.7 protein_coding 120125108,120147806,120158130,120162426,120168161,120196791,120197811,120199402,120203709,120206943,120208232,120209756,120212448,120216351,120225088,120226627,120227220,120228710,120231467,120243879,120247613,120250617,120255240,120262868,120266827,120270035,120278111,120278435,120279935,120280711,120280921,120283636,120285861,120289608,120297511,120300732,120310009,120313932,120315533,120315944,120332141,120332664,120341325,120342380,120345375,120367171,120369330,120371152 120125340,120147930,120158246,120162569,120168247,120196946,120197930,120199566,120203870,120207094,120208361,120209901,120212577,120216490,120225214,120226766,120227352,120228769,120231618,120244008,120247735,120250766,120255356,120263014,120266883,120270174,120278234,120278578,120280099,120280749,120281059,120283778,120285970,120289766,120297588,120300818,120310062,120314027,120315586,120315997,120332194,120332735,120341360,120342446,120345563,120367248,120369485,120372036 Gene ID= ENSG00000187955.11 TPM= 3.62 Transcript Type= protein_coding chr8 120395847 120445386 120395847 120445386 - ENST00000306185.7@MRPL13 ENST00000306185.7 protein_coding 120445068,120443185,120432030,120425306,120419852,120413991,120395847 120445386,120443308,120432123,120425366,120419938,120414112,120396125 Gene ID= ENSG00000172172.7 TPM= 55.69 Transcript Type= protein_coding chr8 120395437 120445402 120395437 120445402 - ENST00000518696.5@MRPL13 ENST00000518696.5 protein_coding 120445068,120443185,120425306,120419852,120413991,120395437 120445402,120443308,120425366,120419938,120414112,120396125 Gene ID= ENSG00000172172.7 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr8 120445426 120523635 120445426 120523635 + ENST00000305949.5@MTBP ENST00000305949.5 protein_coding 120445426,120446433,120451003,120451171,120453847,120455435,120456553,120459215,120461161,120463692,120470820,120488159,120490463,120497393,120502492,120506706,120509934,120515925,120517851,120518704,120522654,120523298 120445588,120446513,120451076,120451322,120453905,120455579,120456670,120459349,120461255,120463761,120470937,120488332,120490570,120497554,120502609,120506861,120510029,120516191,120518100,120518817,120522719,120523635 Gene ID= ENSG00000172167.7 TPM= 1.81 Transcript Type= protein_coding chr8 120535745 120812526 120535745 120812526 - transcript2226.chr8.nnic@SNTB1 transcript2226.chr8.nnic protein_coding 120812426,120811273,120693692,120632444,120575086,120548762,120541810,120535745 120812526,120812069,120693908,120632651,120575225,120548958,120542000,120538969 Gene ID= ENSG00000172164.13 TPM= 80.7 Transcript Type= NA chr8 122781574 122974508 122781574 122974508 + transcript2240.chr8.nnic@ZHX2 transcript2240.chr8.nnic protein_coding 122781574,122863477,122973242 122781946,122863539,122974508 Gene ID= ENSG00000178764.7 TPM= 3.62 Transcript Type= NA chr8 123013164 123042423 123013164 123042423 - ENST00000259512.8@DERL1 ENST00000259512.8 protein_coding 123041970,123030605,123024986,123023713,123022684,123021447,123019195,123013164 123042423,123030716,123025050,123023739,123022779,123021499,123019305,123015585 Gene ID= ENSG00000136986.9 TPM= 158.92 Transcript Type= protein_coding chr8 123072680 123152150 123072680 123152150 + ENST00000287380.5@TBC1D31 ENST00000287380.5 protein_coding 123072680,123077111,123082702,123084162,123093591,123097282,123100807,123105288,123109317,123109474,123120055,123126056,123126508,123128281,123129066,123130198,123134114,123140761,123142262,123144717,123150036,123151806 123072846,123077257,123082817,123084340,123093742,123097441,123101007,123105464,123109396,123109620,123120188,123126189,123126687,123128513,123129218,123130333,123134206,123140901,123142456,123144855,123150128,123152150 Gene ID= ENSG00000156787.16 TPM= 5.43 Transcript Type= protein_coding chr8 123226192 123241397 123226192 123241397 - transcript2262.chr8.nic@C8orf76 transcript2262.chr8.nic protein_coding 123241230,123239049,123237798,123231300,123226500,123226192 123241397,123239144,123237941,123231757,123226632,123226418 Gene ID= ENSG00000189376.11 TPM= 2.72 Transcript Type= NA chr8 123219957 123241398 123219957 123241398 - ENST00000276704.5@C8orf76 ENST00000276704.5 protein_coding 123241230,123239049,123237798,123231300,123226500,123219957 123241398,123239144,123237941,123231757,123226632,123220297 Gene ID= ENSG00000189376.11 TPM= 19.02 Transcript Type= protein_coding chr8 123219973 123274584 123219973 123274584 - transcript2259.chr8.nic@ZHX1-C8orf76 transcript2259.chr8.nic protein_coding 123274217,123267273,123239049,123237798,123231300,123226500,123219973 123274584,123267386,123239144,123237941,123231757,123226632,123220297 Gene ID= ENSG00000259305.6 TPM= 1.81 Transcript Type= NA chr8 123248748 123274568 123248748 123274568 - transcript2270.chr8.nic@ZHX1 transcript2270.chr8.nic protein_coding 123274122,123267273,123248748 123274568,123267386,123250320 Gene ID= ENSG00000165156.14 TPM= 2.26 Transcript Type= NA chr8 123248457 123274598 123248457 123274598 - transcript2271.chr8.nic@ZHX1 transcript2271.chr8.nic protein_coding 123274217,123267273,123248457 123274598,123267386,123250320 Gene ID= ENSG00000165156.14 TPM= 4.07 Transcript Type= NA chr8 123252433 123274574 123252433 123274574 - transcript2272.chr8.nic@ZHX1 transcript2272.chr8.nic protein_coding 123274217,123267273,123252433 123274574,123267386,123256171 Gene ID= ENSG00000165156.14 TPM= 1.81 Transcript Type= NA chr8 123274322 123316577 123274322 123316577 + transcript2268.chr8.nnic@AC018992.1 transcript2268.chr8.nnic processed_pseudogene 123274322,123314416,123314942,123315476 123274828,123314901,123315075,123316577 Gene ID= ENSG00000253336.1 TPM= 1.81 Transcript Type= NA chr8 123319855 123416407 123319855 123416407 - transcript2273.chr8.nnic@ATAD2 transcript2273.chr8.nnic protein_coding 123416248,123412080,123380529,123372637,123371670,123371236,123370903,123369821,123369058,123361539,123359577,123359221,123357562,123356389,123349285,123348183,123347092,123346618,123346086,123344884,123339311,123337625,123336373,123334200,123333878,123328190,123325893,123322938,123319855 123416407,123412177,123380677,123372686,123371835,123371338,123370990,123370024,123369175,123361646,123359685,123359336,123357736,123356477,123349444,123348273,123347406,123346750,123346272,123345069,123339446,123337821,123336532,123334322,123334021,123328579,123326026,123323066,123321175 Gene ID= ENSG00000156802.12 TPM= 1.81 Transcript Type= NA chr8 123319850 123396465 123319850 123396465 - ENST00000287394.9@ATAD2 ENST00000287394.9 protein_coding 123396187,123380529,123372637,123371670,123371236,123370903,123369821,123369058,123361539,123359577,123359221,123357562,123356389,123349285,123348183,123347092,123346618,123346086,123344884,123339311,123337625,123336373,123334200,123333878,123328190,123325893,123322938,123319850 123396465,123380677,123372686,123371835,123371338,123370990,123370024,123369175,123361646,123359685,123359336,123357736,123356477,123349444,123348273,123347406,123346750,123346272,123345069,123339446,123337821,123336532,123334322,123334021,123328579,123326026,123323066,123321175 Gene ID= ENSG00000156802.12 TPM= 5.43 Transcript Type= protein_coding chr8 123416725 123442021 123416725 123442021 + ENST00000287387.6@WDYHV1 ENST00000287387.6 protein_coding 123416725,123427924,123429983,123436453,123437210,123441306 123416932,123428023,123430033,123436601,123437334,123442021 Gene ID= ENSG00000156795.6 TPM= 3.62 Transcript Type= protein_coding chr8 124305958 124372700 124305958 124372700 - transcript2289.chr8.nnic@TMEM65 transcript2289.chr8.nnic protein_coding 124371854,124330748,124327354,124323321,124322105,124320086,124313965,124305958 124372700,124330792,124327421,124323375,124322147,124320191,124314061,124307447 Gene ID= ENSG00000164983.7 TPM= 4.53 Transcript Type= NA chr8 124474738 124487914 124474738 124487914 + ENST00000303545.3@RNF139 ENST00000303545.3 protein_coding 124474738,124485831 124475290,124487914 Gene ID= ENSG00000170881.4 TPM= 57.05 Transcript Type= protein_coding chr8 124488503 124539106 124488503 124539106 - transcript2296.chr8.nic@TATDN1 transcript2296.chr8.nic protein_coding 124539025,124522937,124522151,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488503 124539106,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696 Gene ID= ENSG00000147687.18 TPM= 3.62 Transcript Type= NA chr8 124488503 124539106 124488503 124539106 - transcript2298.chr8.nic@TATDN1 transcript2298.chr8.nic protein_coding 124539025,124522937,124518742,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488503 124539106,124523002,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696 Gene ID= ENSG00000147687.18 TPM= 1.81 Transcript Type= NA chr8 124488508 124539084 124488508 124539084 - ENST00000276692.10@TATDN1 ENST00000276692.10 protein_coding 124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504271,124495472,124493833,124488508 124539084,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124495542,124493959,124488696 Gene ID= ENSG00000147687.18 TPM= 12.68 Transcript Type= protein_coding chr8 124488508 124539088 124488508 124539088 - ENST00000523214.5@TATDN1 ENST00000523214.5 protein_coding 124539025,124522937,124522151,124518818,124515887,124515746,124508603,124508474,124504271,124503840,124495472,124493833,124488508 124539088,124523002,124522200,124518881,124516030,124515788,124508688,124508514,124504347,124503951,124495542,124493959,124488696 Gene ID= ENSG00000147687.18 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr8 124539103 124549979 124539103 124549979 + ENST00000276689.7@NDUFB9 ENST00000276689.7 protein_coding 124539103,124543087,124547000,124549761 124539287,124543279,124547113,124549979 Gene ID= ENSG00000147684.7 TPM= 95.54 Transcript Type= protein_coding chr8 124539144 124549978 124539144 124549978 + ENST00000517367.1@NDUFB9 ENST00000517367.1 protein_coding 124539144,124543120,124547000,124549761 124539287,124543279,124547113,124549978 Gene ID= ENSG00000147684.7 TPM= 2.26 Transcript Type= protein_coding chr8 124550790 124728472 124550790 124728472 - transcript2295.chr8.nic@MTSS1 transcript2295.chr8.nic protein_coding 124727884,124704130,124699526,124591151,124589620,124585087,124568379,124567071,124565662,124562782,124556232,124555742,124550790 124728472,124704191,124699599,124591235,124589711,124585161,124568536,124567178,124565759,124562992,124556405,124555904,124553692 Gene ID= ENSG00000170873.18 TPM= 6.79 Transcript Type= NA chr8 124550790 124728429 124550790 124728429 - ENST00000518547.5@MTSS1 ENST00000518547.5 protein_coding 124727884,124704130,124699526,124591151,124589620,124585087,124568379,124567071,124565662,124562782,124557681,124556232,124555742,124550790 124728429,124704191,124699599,124591235,124589711,124585161,124568536,124567178,124565759,124562992,124557875,124556405,124555904,124553692 Gene ID= ENSG00000170873.18 TPM= 14.94 Transcript Type= protein_coding chr8 124998506 125022283 124998506 125022283 + ENST00000265896.9@SQLE ENST00000265896.9 protein_coding 124998506,125003176,125005525,125007391,125008971,125009172,125011537,125018059,125018631,125020784,125021753 124999694,125003428,125005705,125007487,125009084,125009343,125011632,125018201,125018727,125020871,125022283 Gene ID= ENSG00000104549.11 TPM= 36.22 Transcript Type= protein_coding chr8 125024260 125091840 125024260 125091840 - ENST00000318410.11@WASHC5 ENST00000318410.11 protein_coding 125091615,125083713,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125032241,125028620,125024260 125091840,125084022,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125032394,125028707,125024673 Gene ID= ENSG00000164961.15 TPM= 68.82 Transcript Type= protein_coding chr8 125024263 125091790 125024263 125091790 - transcript2317.chr8.nic@WASHC5 transcript2317.chr8.nic protein_coding 125091615,125083113,125082383,125081661,125078738,125076348,125074998,125073153,125067592,125063522,125061082,125059376,125059222,125057556,125056677,125055591,125050564,125049006,125047207,125044536,125043992,125043825,125039795,125038830,125037237,125032241,125028620,125024263 125091790,125083258,125082467,125081761,125078930,125076500,125075111,125073324,125067719,125063651,125061194,125059542,125059297,125057666,125056817,125055671,125050665,125049185,125047331,125044698,125044094,125043904,125039898,125038959,125037333,125032394,125028707,125024673 Gene ID= ENSG00000164961.15 TPM= 11.77 Transcript Type= NA chr8 125091859 125367125 125091859 125367125 + transcript2326.chr8.nic@NSMCE2 transcript2326.chr8.nic protein_coding 125091859,125102014,125102317,125151171,125182103,125357219,125357712,125366768 125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367125 Gene ID= ENSG00000156831.7 TPM= 2.72 Transcript Type= NA chr8 125091870 125367075 125091870 125367075 + ENST00000522563.5@NSMCE2 ENST00000522563.5 protein_coding 125091870,125102317,125151171,125182103,125357219,125357712,125366768 125091958,125102487,125151277,125182256,125357319,125357818,125367075 Gene ID= ENSG00000156831.7 TPM= 4.53 Transcript Type= protein_coding chr8 125091853 125367120 125091853 125367120 + ENST00000287437.7@NSMCE2 ENST00000287437.7 protein_coding 125091853,125102051,125102317,125151171,125182103,125357219,125357712,125366768 125091958,125102146,125102487,125151277,125182256,125357319,125357818,125367120 Gene ID= ENSG00000156831.7 TPM= 6.34 Transcript Type= protein_coding chr8 125430321 125438405 125430321 125438405 + ENST00000311922.3@TRIB1 ENST00000311922.3 protein_coding 125430321,125433317,125436006 125431262,125433609,125438405 Gene ID= ENSG00000173334.3 TPM= 41.66 Transcript Type= protein_coding chr8 126552488 126558489 126552488 126558489 - transcript2334.chr8.nic@FAM84B transcript2334.chr8.nic protein_coding 126558034,126556265,126552488 126558489,126557485,126553503 Gene ID= ENSG00000168672.3 TPM= 1.81 Transcript Type= NA chr8 127736071 127741440 127736071 127741440 + transcript2346.chr8.nic@MYC transcript2346.chr8.nic protein_coding 127736071,127738292,127740396 127736623,127739019,127741440 Gene ID= ENSG00000136997.17 TPM= 10.87 Transcript Type= NA chr8 128049198 128101254 128049198 128101254 + transcript2360.chr8.nnic@PVT1 transcript2360.chr8.nnic lincRNA 128049198,128096518,128100980 128049748,128096654,128101254 Gene ID= ENSG00000249859.9 TPM= 4.53 Transcript Type= NA chr8 129841469 130016705 129841469 130016705 - transcript2362.chr8.nic@FAM49B transcript2362.chr8.nic protein_coding 130016370,129970943,129912470,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841469 130016705,129970995,129912515,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 1.81 Transcript Type= NA chr8 129841471 130016705 129841471 130016705 - transcript2363.chr8.nic@FAM49B transcript2363.chr8.nic protein_coding 130016370,129970943,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841471 130016705,129970995,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 17.21 Transcript Type= NA chr8 129841472 130016733 129841472 130016733 - transcript2367.chr8.nic@FAM49B transcript2367.chr8.nic protein_coding 130016607,129970943,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841472 130016733,129970995,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 3.62 Transcript Type= NA chr8 129839593 129939832 129839593 129939832 - ENST00000519824.6@FAM49B ENST00000519824.6 protein_coding 129939608,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129839593 129939832,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 3.62 Transcript Type= protein_coding chr8 129841472 130016542 129841472 130016542 - transcript2372.chr8.nic@FAM49B transcript2372.chr8.nic protein_coding 130016370,129970943,129903312,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841472 130016542,129970995,129903350,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 1.81 Transcript Type= NA chr8 129841484 130016451 129841484 130016451 - ENST00000517654.5@FAM49B ENST00000517654.5 protein_coding 130016370,129970943,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841484 130016451,129970995,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 10.87 Transcript Type= protein_coding chr8 129841470 130016672 129841470 130016672 - ENST00000519110.5@FAM49B ENST00000519110.5 protein_coding 130016607,129970943,129904499,129903312,129879389,129871375,129862229,129855611,129854266,129852162,129850835,129849243,129846804,129841470 130016672,129970995,129904585,129903350,129879471,129871496,129862334,129855747,129854343,129852278,129850914,129849369,129846874,129842205 Gene ID= ENSG00000153310.19 TPM= 5.43 Transcript Type= protein_coding chr8 130052105 130443899 130052105 130443899 - transcript2378.chr8.nic@ASAP1 transcript2378.chr8.nic protein_coding 130443460,130401885,130358017,130236922,130214556,130188109,130187236,130180751,130179264,130168992,130167536,130159864,130152736,130136951,130134296,130127927,130125956,130124013,130118489,130118161,130116880,130116678,130115628,130112094,130079902,130076348,130060579,130057954,130052105 130443899,130401970,130358143,130236994,130214701,130188183,130187285,130180880,130179349,130169067,130167622,130159964,130152805,130137038,130134344,130128090,130126089,130124104,130118675,130118246,130116995,130116745,130115735,130112322,130079971,130076406,130061069,130058076,130054805 Gene ID= ENSG00000153317.14 TPM= 3.62 Transcript Type= NA chr8 130052842 130443660 130052842 130443660 - ENST00000518721.5@ASAP1 ENST00000518721.5 protein_coding 130443460,130401885,130358017,130236922,130214556,130188109,130187236,130180751,130179264,130168992,130167536,130159864,130152736,130136951,130134296,130127927,130125956,130124013,130118489,130118161,130116880,130116678,130115628,130112094,130091973,130079902,130076348,130060579,130057954,130052842 130443660,130401970,130358143,130236994,130214701,130188183,130187285,130180880,130179349,130169067,130167622,130159964,130152805,130137038,130134344,130128090,130126089,130124104,130118675,130118246,130116995,130116745,130115735,130112322,130092143,130079971,130076406,130061069,130058076,130054805 Gene ID= ENSG00000153317.14 TPM= 1.81 Transcript Type= protein_coding chr8 131904063 132013516 131904063 132013516 + transcript2386.chr8.nic@EFR3A transcript2386.chr8.nic protein_coding 131904063,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346,131984139,131984929,131986194,131987575,131996406,132001759,132002603,132003236,132010790 131904322,131940644,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979421,131984300,131985060,131986261,131987702,131996497,132001807,132002706,132003285,132013516 Gene ID= ENSG00000132294.14 TPM= 3.17 Transcript Type= NA chr8 131916766 132013522 131916766 132013522 + transcript2387.chr8.nnic@EFR3A transcript2387.chr8.nnic protein_coding 131916766,131940499,131944745,131946483,131949969,131953818,131955768,131959585,131968295,131970476,131976027,131977041,131978847,131979346,131984139,131984929,131986194,131987575,131996406,132001759,132002603,132003236,132010790 131916838,131940575,131944872,131946633,131950090,131953967,131955905,131959663,131968430,131970643,131976141,131977092,131979019,131979421,131984300,131985060,131986261,131987702,131996497,132001807,132002706,132003285,132013522 Gene ID= ENSG00000132294.14 TPM= 4.98 Transcript Type= NA chr8 132775347 132843497 132775347 132843497 + transcript2394.chr8.nnic@PHF20L1 transcript2394.chr8.nnic protein_coding 132775347,132777796,132794410,132794733,132798772,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264,132832235,132836540,132837712,132839387,132842515,132843032 132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371,132832399,132836721,132837811,132839582,132842875,132843497 Gene ID= ENSG00000129292.20 TPM= 4.53 Transcript Type= NA chr8 132775347 132843106 132775347 132843106 + transcript2395.chr8.nic@PHF20L1 transcript2395.chr8.nic protein_coding 132775347,132777796,132794410,132794733,132798772,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264,132832235,132836540,132837712,132839387,132842515 132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371,132832399,132836721,132837811,132839582,132843106 Gene ID= ENSG00000129292.20 TPM= 3.62 Transcript Type= NA chr8 132775347 132832839 132775347 132832839 + transcript2397.chr8.nic@PHF20L1 transcript2397.chr8.nic protein_coding 132775347,132777796,132794410,132794733,132798772,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264,132832235 132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371,132832839 Gene ID= ENSG00000129292.20 TPM= 3.62 Transcript Type= NA chr8 132775347 132815997 132775347 132815997 + transcript2399.chr8.nic@PHF20L1 transcript2399.chr8.nic protein_coding 132775347,132777796,132794410,132794733,132798772,132803819,132804615,132811046,132814637 132775645,132777911,132794581,132794817,132798860,132804032,132804740,132811128,132815997 Gene ID= ENSG00000129292.20 TPM= 3.62 Transcript Type= NA chr8 132775384 132848807 132775384 132848807 + ENST00000395386.6@PHF20L1 ENST00000395386.6 protein_coding 132775384,132777792,132794410,132794733,132798772,132799095,132803819,132804615,132811046,132814637,132816888,132817339,132824004,132825264,132832235,132836540,132837712,132839387,132842515,132844156,132845781 132775645,132777911,132794581,132794817,132798860,132799172,132804032,132804740,132811128,132814889,132817076,132817545,132824060,132825371,132832399,132836721,132837811,132839582,132842875,132844318,132848807 Gene ID= ENSG00000129292.20 TPM= 8.15 Transcript Type= protein_coding chr8 132775408 132812316 132775408 132812316 + ENST00000337920.8@PHF20L1 ENST00000337920.8 protein_coding 132775408,132777796,132794410,132794733,132798772,132803819,132804615,132811046 132775645,132777911,132794581,132794817,132798860,132804032,132804740,132812316 Gene ID= ENSG00000129292.20 TPM= 3.62 Transcript Type= protein_coding chr8 132775398 132799960 132775398 132799960 + ENST00000485595.5@PHF20L1 ENST00000485595.5 protein_coding 132775398,132777796,132794410,132794733,132798772 132775645,132777911,132794581,132794817,132799960 Gene ID= ENSG00000129292.20 TPM= 1.81 Transcript Type= protein_coding chr8 133035760 133075043 133035760 133075043 - transcript2403.chr8.nic@SLA transcript2403.chr8.nic protein_coding 133074853,133060100,133050816,133049902,133047830,133044984,133039998,133035760 133075043,133060200,133050915,133049988,133047933,133045115,133040130,133038737 Gene ID= ENSG00000155926.13 TPM= 61.58 Transcript Type= NA chr8 133191036 133231595 133191036 133231595 + transcript2408.chr8.nnic@WISP1 transcript2408.chr8.nnic protein_coding 133191036,133212864,133227411 133191213,133213120,133231595 Gene ID= ENSG00000104415.13 TPM= 2.26 Transcript Type= NA chr8 133191039 133230344 133191039 133230344 + ENST00000250160.10@WISP1 ENST00000250160.10 protein_coding 133191039,133212864,133220581,133225390,133227411 133191213,133213143,133220841,133225583,133230344 Gene ID= ENSG00000104415.13 TPM= 9.51 Transcript Type= protein_coding chr8 133237171 133297237 133237171 133297237 - ENST00000323851.11@NDRG1 ENST00000323851.11 protein_coding 133297134,133284249,133280232,133264547,133262047,133259168,133258366,133256777,133254539,133250440,133248715,133247875,133246616,133244355,133242023,133237171 133297237,133284329,133280267,133264652,133262167,133259230,133258426,133256863,133254595,133250543,133248771,133247926,133246663,133244390,133242074,133239119 Gene ID= ENSG00000104419.14 TPM= 130.62 Transcript Type= protein_coding chr8 133454848 133571997 133454848 133571997 - transcript2426.chr8.nic@ST3GAL1 transcript2426.chr8.nic protein_coding 133571693,133545774,133539637,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133454848 133571997,133545926,133539729,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937 Gene ID= ENSG00000008513.14 TPM= 8.67 Transcript Type= NA chr8 133454848 133570375 133454848 133570375 - transcript2429.chr8.nic@ST3GAL1 transcript2429.chr8.nic protein_coding 133570110,133545774,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133454848 133570375,133545926,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937 Gene ID= ENSG00000008513.14 TPM= 7.76 Transcript Type= NA chr8 133454848 133571915 133454848 133571915 - transcript2433.chr8.nic@ST3GAL1 transcript2433.chr8.nic protein_coding 133571693,133545774,133476278,133475719,133465894,133464778,133463414,133461875,133454848 133571915,133545926,133476600,133476074,133466090,133464957,133463459,133461994,133459937 Gene ID= ENSG00000008513.14 TPM= 7.31 Transcript Type= NA chr8 133454848 133570442 133454848 133570442 - transcript2434.chr8.nic@ST3GAL1 transcript2434.chr8.nic protein_coding 133570110,133545774,133499135,133475719,133465894,133464778,133463414,133461875,133454848 133570442,133545926,133499189,133476600,133466090,133464957,133463459,133461994,133459937 Gene ID= ENSG00000008513.14 TPM= 5.8 Transcript Type= NA chr8 133454853 133571925 133454853 133571925 - ENST00000521180.5@ST3GAL1 ENST00000521180.5 protein_coding 133571693,133545774,133499135,133475719,133465894,133464778,133463414,133461875,133454853 133571925,133545926,133499189,133476600,133466090,133464957,133463459,133461994,133459937 Gene ID= ENSG00000008513.14 TPM= 19.38 Transcript Type= protein_coding chr8 133458945 133571849 133458945 133571849 - ENST00000522652.5@ST3GAL1 ENST00000522652.5 protein_coding 133571693,133545774,133499135,133476278,133475719,133465894,133464778,133463414,133461875,133458945 133571849,133545926,133499189,133476600,133476074,133466090,133464957,133463459,133461994,133459937 Gene ID= ENSG00000008513.14 TPM= 22.64 Transcript Type= protein_coding chr8 134477792 134713038 134477792 134713038 - ENST00000377838.7@ZFAT ENST00000377838.7 protein_coding 134712845,134657561,134637461,134610470,134608729,134601477,134600436,134590268,134588246,134583832,134565333,134532834,134520883,134512475,134509619,134477792 134713038,134657737,134637712,134610655,134608879,134602933,134600668,134590355,134588395,134584005,134565421,134532972,134521001,134512601,134509749,134478721 Gene ID= ENSG00000066827.15 TPM= 1.81 Transcript Type= protein_coding chr8 135457422 135656514 135457422 135656514 + transcript2448.chr8.nic@KHDRBS3 transcript2448.chr8.nic protein_coding 135457422,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993,135648540,135656226 135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135647142,135648598,135656514 Gene ID= ENSG00000131773.13 TPM= 1.81 Transcript Type= NA chr8 135457422 135656514 135457422 135656514 + transcript2449.chr8.nic@KHDRBS3 transcript2449.chr8.nic protein_coding 135457422,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993,135648540,135656226 135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135648121,135648598,135656514 Gene ID= ENSG00000131773.13 TPM= 1.81 Transcript Type= NA chr8 135457457 135647610 135457457 135647610 + ENST00000355849.9@KHDRBS3 ENST00000355849.9 protein_coding 135457457,135521237,135542654,135548754,135557448,135581878,135606955,135645059,135646993 135457954,135521355,135542770,135548900,135557587,135582073,135607037,135645117,135647610 Gene ID= ENSG00000131773.13 TPM= 8.15 Transcript Type= protein_coding chr8 139730345 140457762 139730345 140457762 - ENST00000438773.2@TRAPPC9 ENST00000438773.2 protein_coding 140457639,140450790,140439052,140435112,140426615,140405577,140397620,140370964,140360050,140311248,140300469,140290993,140287608,140283889,140275658,140252777,140221459,140023937,139988726,139910147,139885879,139731979,139730345 140457762,140451383,140439197,140435240,140426641,140405698,140397745,140371180,140360193,140311374,140300614,140291078,140287734,140284021,140275821,140252929,140221583,140024079,139988836,139910300,139885969,139732202,139731228 Gene ID= ENSG00000167632.14 TPM= 52.52 Transcript Type= protein_coding chr8 140511298 140517137 140511298 140517137 + ENST00000220913.9@CHRAC1 ENST00000220913.9 protein_coding 140511298,140514369,140515126 140511646,140514495,140517137 Gene ID= ENSG00000104472.9 TPM= 47.09 Transcript Type= protein_coding chr8 140658384 141001264 140658384 141001264 - transcript2480.chr8.nic@PTK2 transcript2480.chr8.nic protein_coding 141001125,140948666,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658384 141001264,140948723,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678 Gene ID= ENSG00000169398.19 TPM= 10.96 Transcript Type= NA chr8 140658384 141001045 140658384 141001045 - transcript2489.chr8.nic@PTK2 transcript2489.chr8.nic protein_coding 141000880,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140686632,140675460,140674298,140668269,140664917,140658384 141001045,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140686694,140675499,140674404,140668424,140664997,140659678 Gene ID= ENSG00000169398.19 TPM= 7.33 Transcript Type= NA chr8 140658384 141001271 140658384 141001271 - transcript2495.chr8.nic@PTK2 transcript2495.chr8.nic protein_coding 141001125,140925661,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140675460,140674298,140668269,140664917,140658384 141001271,140925749,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140675499,140674404,140668424,140664997,140659678 Gene ID= ENSG00000169398.19 TPM= 5.65 Transcript Type= NA chr8 140658384 141001290 140658384 141001290 - transcript2505.chr8.nic@PTK2 transcript2505.chr8.nic protein_coding 141001125,140890543,140879471,140864312,140846599,140846260,140830472,140818880,140818277,140803543,140800459,140793354,140789474,140764234,140761165,140752232,140746760,140744652,140743230,140739018,140735251,140717598,140706119,140702570,140700891,140675460,140674298,140668269,140664917,140658384 141001290,140890769,140879637,140864399,140846678,140846322,140830526,140819020,140818354,140803650,140800576,140793384,140789526,140764290,140761262,140752316,140746860,140744767,140743330,140739107,140735455,140717709,140706205,140702707,140701022,140675499,140674404,140668424,140664997,140659678 Gene ID= ENSG00000169398.19 TPM= 7.46 Transcript Type= NA chr8 140658405 140670264 140658405 140670264 - ENST00000517712.5@PTK2 ENST00000517712.5 protein_coding 140668269,140664917,140658405 140670264,140664997,140659678 Gene ID= ENSG00000169398.19 TPM= 1.97 Transcript Type= protein_coding chr8 141128638 141195808 141128638 141195808 + ENST00000519811.5@DENND3 ENST00000519811.5 protein_coding 141128638,141136509,141138022,141141203,141144148,141150834,141151619,141155849,141160632,141163333,141165186,141166190,141168004,141175200,141176591,141178067,141180747,141185139,141188986,141190284,141192331,141192526,141194033 141128809,141136791,141138137,141141324,141144259,141150953,141151837,141155970,141160787,141163429,141165289,141166389,141168525,141175459,141176761,141178196,141180854,141185278,141189146,141190417,141192449,141192663,141195808 Gene ID= ENSG00000105339.10 TPM= 11.77 Transcript Type= protein_coding chr8 141417891 141431520 141417891 141431520 + transcript2533.chr8.nnic@PTP4A3 transcript2533.chr8.nnic protein_coding 141417891,141421388,141425048,141426939,141427750,141430927 141418018,141422345,141425140,141427069,141427824,141431520 Gene ID= ENSG00000184489.11 TPM= 11.77 Transcript Type= NA chr8 141391995 141431520 141391995 141431520 + ENST00000520105.5@PTP4A3 ENST00000520105.5 protein_coding 141391995,141421388,141425048,141426939,141430927 141392084,141422345,141425140,141427069,141431520 Gene ID= ENSG00000184489.11 TPM= 3.62 Transcript Type= protein_coding chr8 142269461 142403198 142269461 142403198 - transcript2543.chr8.nnic@TSNARE1 transcript2543.chr8.nnic protein_coding 142403104,142354637,142345743,142343966,142331754,142330901,142318544,142315003,142314384,142300486,142284413,142279860,142274781,142269461 142403198,142354763,142345892,142344472,142331831,142330970,142318634,142315092,142314440,142300644,142284485,142280324,142274863,142271691 Gene ID= ENSG00000171045.14 TPM= 2.34 Transcript Type= NA chr8 142269461 142402907 142269461 142402907 - transcript2544.chr8.nnic@TSNARE1 transcript2544.chr8.nnic protein_coding 142402747,142354637,142345743,142343966,142331754,142330901,142318544,142315003,142314384,142300486,142284413,142279860,142274781,142269461 142402907,142354763,142345892,142344472,142331831,142330970,142318634,142315092,142314440,142300647,142284485,142280324,142274863,142271691 Gene ID= ENSG00000171045.14 TPM= 2.79 Transcript Type= NA chr8 142270486 142278229 142270486 142278229 - transcript2554.chr8.nnic@TSNARE1 transcript2554.chr8.nnic protein_coding 142275409,142274781,142270486 142278229,142274863,142271691 Gene ID= ENSG00000171045.14 TPM= 2.04 Transcript Type= NA chr8 142611044 142614472 142611044 142614472 - ENST00000356613.3@ARC ENST00000356613.3 protein_coding 142612484,142612108,142611044 142614472,142612252,142611857 Gene ID= ENSG00000198576.3 TPM= 1.81 Transcript Type= protein_coding chr8 142657463 142669970 142657463 142669970 - ENST00000615982.4@JRK ENST00000615982.4 protein_coding 142669932,142664478,142658822,142657463 142669970,142666520,142658944,142658080 Gene ID= ENSG00000234616.8 TPM= 1.81 Transcript Type= protein_coding chr8 142727203 142736927 142727203 142736927 + ENST00000336138.3@THEM6 ENST00000336138.3 protein_coding 142727203,142735326 142727859,142736927 Gene ID= ENSG00000130193.7 TPM= 141.27 Transcript Type= protein_coding chr8 142771197 142777328 142771197 142777328 - ENST00000614491.1@LYNX1 ENST00000614491.1 protein_coding 142777106,142775906,142775593,142771197 142777328,142776121,142775694,142775363 Gene ID= ENSG00000180155.19 TPM= 10.87 Transcript Type= protein_coding chr8 142771197 142777810 142771197 142777810 - ENST00000621401.4@LYNX1 ENST00000621401.4 protein_coding 142777759,142775906,142775593,142771197 142777810,142776121,142775694,142775363 Gene ID= ENSG00000180155.19 TPM= 9.96 Transcript Type= protein_coding chr8 142784880 142786592 142784880 142786592 - ENST00000301263.4@LY6D ENST00000301263.4 protein_coding 142786465,142785589,142784880 142786592,142785687,142785456 Gene ID= ENSG00000167656.4 TPM= 39.84 Transcript Type= protein_coding chr8 142871341 142879885 142871341 142879885 - transcript2708.chr8.nic@CYP11B1 transcript2708.chr8.nic protein_coding 142879575,142879346,142879032,142877023,142876682,142875712,142875234,142874957,142871341 142879885,142879480,142879187,142877222,142876885,142876395,142875312,142875154,142874486 Gene ID= ENSG00000160882.11 TPM= 344.35 Transcript Type= NA chr8 142871341 142879981 142871341 142879981 - transcript2713.chr8.nic@CYP11B1 transcript2713.chr8.nic protein_coding 142879575,142879032,142877023,142876682,142876241,142875712,142875234,142874957,142871341 142879981,142879187,142877222,142876885,142876395,142875878,142875381,142875154,142874486 Gene ID= ENSG00000160882.11 TPM= 492.44 Transcript Type= NA chr8 142871341 142880060 142871341 142880060 - transcript2820.chr8.nic@CYP11B1 transcript2820.chr8.nic protein_coding 142879575,142879032,142877023,142876682,142875712,142875234,142874957,142871341 142880060,142879187,142877222,142876885,142876395,142875312,142875154,142874486 Gene ID= ENSG00000160882.11 TPM= 1698.17 Transcript Type= NA chr8 142871341 142879931 142871341 142879931 - transcript2822.chr8.nic@CYP11B1 transcript2822.chr8.nic protein_coding 142879575,142879032,142877023,142876682,142875712,142875234,142874957,142871341 142879931,142879480,142877222,142876885,142876395,142875312,142875154,142874486 Gene ID= ENSG00000160882.11 TPM= 527.27 Transcript Type= NA chr8 142872356 142879846 142872356 142879846 - ENST00000314111.4@CYP11B1 ENST00000314111.4 protein_coding 142879575,142879032,142877023,142876682,142875712,142875234,142872356 142879846,142879187,142877222,142876885,142876395,142875312,142874486 Gene ID= ENSG00000160882.11 TPM= 658.4 Transcript Type= retained_intron chr8 142872357 142875797 142872357 142875797 - ENST00000519285.5@CYP11B1 ENST00000519285.5 protein_coding 142875712,142875234,142874957,142872357 142875797,142875381,142875154,142874486 Gene ID= ENSG00000160882.11 TPM= 194.81 Transcript Type= protein_coding chr8 142873824 142879824 142873824 142879824 - ENST00000517471.5@CYP11B1 ENST00000517471.5 protein_coding 142879575,142879032,142877023,142876682,142876241,142875712,142875234,142873824 142879824,142879187,142877222,142876885,142876395,142875878,142875312,142874486 Gene ID= ENSG00000160882.11 TPM= 612.87 Transcript Type= protein_coding chr8 142873825 142879820 142873825 142879820 - ENST00000377675.3@CYP11B1 ENST00000377675.3 protein_coding 142879575,142879346,142879032,142877757,142877023,142876682,142876241,142875712,142875234,142874957,142873825 142879820,142879480,142879187,142877834,142877222,142876885,142876395,142875878,142875312,142875154,142874486 Gene ID= ENSG00000160882.11 TPM= 10.66 Transcript Type= protein_coding chr8 142910410 142917943 142910410 142917943 - transcript2986.chr8.nic@CYP11B2 transcript2986.chr8.nic protein_coding 142917602,142917059,142915046,142914705,142913285,142912807,142912530,142910410 142917943,142917214,142915245,142914908,142914418,142912885,142912727,142912093 Gene ID= ENSG00000179142.2 TPM= 241.71 Transcript Type= NA chr8 142910554 142917881 142910554 142917881 - transcript2991.chr8.nic@CYP11B2 transcript2991.chr8.nic protein_coding 142917602,142917059,142914705,142913285,142912807,142912530,142910554 142917881,142917214,142915245,142914418,142912885,142912727,142912093 Gene ID= ENSG00000179142.2 TPM= 51.84 Transcript Type= NA chr8 142910559 142917843 142910559 142917843 - ENST00000323110.2@CYP11B2 ENST00000323110.2 protein_coding 142917602,142917059,142915046,142914705,142914264,142913285,142912807,142912530,142910559 142917843,142917214,142915245,142914908,142914418,142913451,142912885,142912727,142912093 Gene ID= ENSG00000179142.2 TPM= 464.02 Transcript Type= protein_coding chr8 143018483 143022410 143018483 143022410 + ENST00000429120.6@LY6E ENST00000429120.6 protein_coding 143018483,143020888,143021314,143021566 143018586,143020991,143021433,143022410 Gene ID= ENSG00000160932.10 TPM= 97.8 Transcript Type= protein_coding chr8 143018546 143022409 143018546 143022409 + ENST00000521182.5@LY6E ENST00000521182.5 protein_coding 143018546,143020883,143021349,143021566 143018586,143020991,143021433,143022409 Gene ID= ENSG00000160932.10 TPM= 12.68 Transcript Type= protein_coding chr8 143213193 143217170 143213193 143217170 + ENST00000622500.1@GPIHBP1 ENST00000622500.1 protein_coding 143213193,143213822,143215013,143215259 143213319,143213950,143215126,143217170 Gene ID= ENSG00000277494.1 TPM= 12.68 Transcript Type= protein_coding chr8 143246932 143262704 143246932 143262704 + transcript3036.chr8.nic@ZFP41 transcript3036.chr8.nic protein_coding 143246932,143249690,143259775 143247749,143251340,143262704 Gene ID= ENSG00000181638.17 TPM= 3.17 Transcript Type= NA chr8 143246928 143262705 143246928 143262705 + ENST00000330701.5@ZFP41 ENST00000330701.5 protein_coding 143246928,143249690,143259775 143247142,143251340,143262705 Gene ID= ENSG00000181638.17 TPM= 2.26 Transcript Type= protein_coding chr8 143267437 143276929 143267437 143276929 + ENST00000340042.1@GLI4 ENST00000340042.1 protein_coding 143267437,143269360,143274704,143275897 143267484,143269520,143274802,143276929 Gene ID= ENSG00000250571.6 TPM= 7.24 Transcript Type= protein_coding chr8 143280828 143281690 143280828 143281690 - ENST00000518073.1@MINCR ENST00000518073.1 antisense_RNA 143281482,143280828 143281690,143280997 Gene ID= ENSG00000253716.5 TPM= 7.24 Transcript Type= antisense_RNA chr8 143291389 143298061 143291389 143298061 + ENST00000330143.7@ZNF696 ENST00000330143.7 protein_coding 143291389,143292972,143295740 143291767,143293065,143298061 Gene ID= ENSG00000185730.7 TPM= 17.21 Transcript Type= protein_coding chr8 143309342 143334879 143309342 143334879 - transcript3048.chr8.nic@TOP1MT transcript3048.chr8.nic protein_coding 143334740,143332487,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309342 143334879,143332601,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543 Gene ID= ENSG00000184428.12 TPM= 4.07 Transcript Type= NA chr8 143309342 143335492 143309342 143335492 - transcript3049.chr8.nnic@TOP1MT transcript3049.chr8.nnic protein_coding 143335126,143332487,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309342 143335492,143332601,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543 Gene ID= ENSG00000184428.12 TPM= 2.26 Transcript Type= NA chr8 143309324 143334896 143309324 143334896 - ENST00000329245.8@TOP1MT ENST00000329245.8 protein_coding 143334740,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309324 143334896,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543 Gene ID= ENSG00000184428.12 TPM= 27.17 Transcript Type= protein_coding chr8 143309377 143334795 143309377 143334795 - ENST00000523676.5@TOP1MT ENST00000523676.5 protein_coding 143334740,143334108,143331224,143329350,143326222,143325346,143324485,143323999,143321201,143318018,143317723,143315999,143315727,143310068,143309377 143334795,143334285,143331339,143329471,143326344,143325533,143324629,143324142,143321386,143318086,143317837,143316126,143315821,143310217,143309543 Gene ID= ENSG00000184428.12 TPM= 1.81 Transcript Type= protein_coding chr8 143368836 143382808 143368836 143382808 + transcript3060.chr8.nnic@RHPN1 transcript3060.chr8.nnic protein_coding 143368836,143375553,143376525,143377380,143378269,143378912,143379325,143379829,143380062,143380589,143381268,143381572,143381807,143382436 143369047,143375668,143376653,143377455,143378820,143379078,143379508,143379985,143380175,143380783,143381344,143381718,143381968,143382808 Gene ID= ENSG00000158106.13 TPM= 1.81 Transcript Type= NA chr8 143437655 143523838 143437655 143523838 - transcript3069.chr8.nnic@ZC3H3 transcript3069.chr8.nnic protein_coding 143523318,143507746,143475398,143468617,143468382,143468209,143465717,143440936,143440041,143437655 143523838,143507899,143475585,143468659,143468540,143468278,143465848,143441120,143440363,143438087 Gene ID= ENSG00000014164.6 TPM= 3.62 Transcript Type= NA chr8 143437655 143541453 143437655 143541453 - ENST00000262577.5@ZC3H3 ENST00000262577.5 protein_coding 143541376,143538003,143536257,143507746,143475398,143468617,143468382,143468209,143465717,143440936,143440041,143437655 143541453,143539320,143536453,143507899,143475585,143468659,143468540,143468278,143465848,143441120,143440363,143438087 Gene ID= ENSG00000014164.6 TPM= 78.78 Transcript Type= protein_coding chr8 143553207 143563062 143553207 143563062 + ENST00000526406.5@GSDMD ENST00000526406.5 protein_coding 143553207,143555059,143555934,143558362,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662 143553760,143555196,143556030,143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062 Gene ID= ENSG00000104518.10 TPM= 27.17 Transcript Type= protein_coding chr8 143558314 143563032 143558314 143563032 + transcript3083.chr8.nic@GSDMD transcript3083.chr8.nic protein_coding 143558314,143559332,143559777,143561002,143561370,143561742,143561959,143562209,143562448,143562662 143558451,143559552,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563032 Gene ID= ENSG00000104518.10 TPM= 9.06 Transcript Type= NA chr8 143558275 143563032 143558275 143563032 + transcript3089.chr8.nic@GSDMD transcript3089.chr8.nic protein_coding 143558275,143559332,143559777,143561742,143561959,143562209,143562448,143562662 143558451,143559552,143561423,143561828,143562131,143562350,143562521,143563032 Gene ID= ENSG00000104518.10 TPM= 23.09 Transcript Type= NA chr8 143558307 143563062 143558307 143563062 + ENST00000262580.8@GSDMD ENST00000262580.8 protein_coding 143558307,143559332,143559777,143560603,143561002,143561370,143561742,143561959,143562209,143562448,143562662 143558451,143559552,143559969,143560771,143561104,143561423,143561828,143562131,143562350,143562521,143563062 Gene ID= ENSG00000104518.10 TPM= 112.29 Transcript Type= protein_coding chr8 143566187 143572971 143566187 143572971 - ENST00000398882.7@MROH6 ENST00000398882.7 protein_coding 143572421,143572033,143571667,143570877,143570473,143570243,143569951,143569697,143569441,143568552,143568142,143567786,143567611,143566187 143572971,143572185,143571821,143570994,143570657,143570380,143570065,143569840,143569614,143568719,143568261,143567888,143567676,143567465 Gene ID= ENSG00000204839.8 TPM= 3.62 Transcript Type= protein_coding chr8 143574783 143578334 143574783 143578334 - transcript3116.chr8.nic@NAPRT transcript3116.chr8.nic protein_coding 143578093,143577816,143577657,143576646,143576432,143576078,143575622,143575423,143575191,143574986,143574783 143578334,143577943,143577739,143577399,143576572,143576162,143575702,143575525,143575345,143575093,143574900 Gene ID= ENSG00000147813.15 TPM= 5.53 Transcript Type= NA chr8 143574785 143578613 143574785 143578613 - ENST00000449291.6@NAPRT ENST00000449291.6 protein_coding 143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575191,143574986,143574785 143578613,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900 Gene ID= ENSG00000147813.15 TPM= 163.1 Transcript Type= protein_coding chr8 143574785 143578343 143574785 143578343 - ENST00000435154.7@NAPRT ENST00000435154.7 protein_coding 143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143574785 143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345 Gene ID= ENSG00000147813.15 TPM= 1.81 Transcript Type= protein_coding chr8 143574787 143578343 143574787 143578343 - ENST00000426292.7@NAPRT ENST00000426292.7 protein_coding 143578093,143577816,143577657,143577269,143577062,143576646,143576432,143576078,143575622,143575423,143575230,143574986,143574787 143578343,143577943,143577739,143577399,143577177,143576842,143576572,143576162,143575702,143575525,143575345,143575093,143574900 Gene ID= ENSG00000147813.15 TPM= 2.82 Transcript Type= protein_coding chr8 143579697 143597675 143579697 143597675 - ENST00000423316.6@EEF1D ENST00000423316.6 protein_coding 143597348,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579697 143597675,143590092,143586852,143586290,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 19.28 Transcript Type= protein_coding chr8 143579728 143597744 143579728 143597744 - ENST00000529272.5@EEF1D ENST00000529272.5 protein_coding 143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579728 143597744,143586849,143586290,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 61.35 Transcript Type= protein_coding chr8 143579728 143597425 143579728 143597425 - ENST00000528610.5@EEF1D ENST00000528610.5 protein_coding 143597348,143586729,143581229,143581054,143580506,143580012,143579728 143597425,143586852,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 41.97 Transcript Type= protein_coding chr8 143579728 143580740 143579728 143580740 - ENST00000530109.5@EEF1D ENST00000530109.5 protein_coding 143580506,143580012,143579728 143580740,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 4.23 Transcript Type= protein_coding chr8 143579728 143597415 143579728 143597415 - ENST00000442189.6@EEF1D ENST00000442189.6 protein_coding 143597348,143590608,143588991,143586729,143586219,143581229,143581054,143580506,143580012,143579728 143597415,143590738,143590081,143586852,143586290,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 29.24 Transcript Type= protein_coding chr8 143579729 143597387 143579729 143597387 - ENST00000529007.5@EEF1D ENST00000529007.5 protein_coding 143597348,143586729,143586219,143581229,143581054,143580506,143580012,143579729 143597387,143586852,143586290,143581328,143581154,143580632,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 4.65 Transcript Type= nonsense_mediated_decay chr8 143579728 143597413 143579728 143597413 - ENST00000526838.5@EEF1D ENST00000526838.5 protein_coding 143597348,143586729,143586219,143581286,143581054,143580506,143580012,143579728 143597413,143586852,143586290,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 2.79 Transcript Type= protein_coding chr8 143579697 143597388 143579697 143597388 - ENST00000317198.10@EEF1D ENST00000317198.10 protein_coding 143596879,143586729,143586219,143581229,143581054,143580506,143580012,143579697 143597388,143586852,143586290,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 4.41 Transcript Type= protein_coding chr8 143579729 143597400 143579729 143597400 - ENST00000531621.5@EEF1D ENST00000531621.5 protein_coding 143597348,143586729,143581286,143581054,143580506,143580012,143579729 143597400,143586852,143581328,143581154,143580727,143580206,143579830 Gene ID= ENSG00000104529.17 TPM= 1.1 Transcript Type= protein_coding chr8 143603913 143609614 143603913 143609614 - ENST00000220966.10@PYCR3 ENST00000220966.10 protein_coding 143609458,143608062,143606953,143606467,143606062,143603913 143609614,143608126,143607132,143606679,143606154,143605882 Gene ID= ENSG00000104524.13 TPM= 55.24 Transcript Type= protein_coding chr8 143612618 143617482 143612618 143617482 - ENST00000529064.5@TSTA3 ENST00000529064.5 protein_coding 143617428,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618 143617482,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965 Gene ID= ENSG00000104522.15 TPM= 4.98 Transcript Type= protein_coding chr8 143612617 143617896 143612617 143617896 - transcript3193.chr8.nic@TSTA3 transcript3193.chr8.nic protein_coding 143617474,143616567,143616106,143614787,143614320,143614164,143613751,143613524,143613196,143612617 143617896,143616723,143616220,143614915,143614697,143614228,143613817,143613603,143613295,143612965 Gene ID= ENSG00000104522.15 TPM= 12.68 Transcript Type= NA chr8 143612618 143617566 143612618 143617566 - ENST00000425753.6@TSTA3 ENST00000425753.6 protein_coding 143617474,143616567,143616106,143614787,143614624,143614320,143614164,143613751,143613524,143613196,143612618 143617566,143616723,143616220,143614915,143614697,143614453,143614228,143613817,143613603,143613295,143612965 Gene ID= ENSG00000104522.15 TPM= 75.61 Transcript Type= protein_coding chr8 143612618 143617504 143612618 143617504 - ENST00000531473.5@TSTA3 ENST00000531473.5 protein_coding 143616567,143616106,143614787,143614320,143614164,143613751,143613524,143613196,143612618 143617504,143616220,143614915,143614697,143614228,143613817,143613603,143613295,143612965 Gene ID= ENSG00000104522.15 TPM= 1.81 Transcript Type= retained_intron chr8 143636013 143652376 143636013 143652376 + ENST00000526926.5@ZNF623 ENST00000526926.5 protein_coding 143636013,143649898 143636145,143652376 Gene ID= ENSG00000183309.11 TPM= 7.24 Transcript Type= protein_coding chr8 143790920 143815810 143790920 143815810 - transcript3205.chr8.nnic@SCRIB transcript3205.chr8.nnic protein_coding 143815214,143814001,143813818,143813637,143813470,143813311,143813030,143812817,143812266,143811146,143810906,143810686,143810479,143809551,143808609,143807552,143806924,143806407,143805112,143804955,143804568,143804046,143803647,143803383,143795420,143795277,143795038,143793900,143792976,143792708,143792485,143792220,143791991,143791876,143791389,143790920 143815810,143814118,143813896,143813726,143813526,143813374,143813104,143812961,143812384,143811345,143811072,143810816,143810604,143809718,143809025,143807614,143807013,143806484,143805435,143805014,143804825,143804156,143803940,143803571,143795530,143795333,143795112,143793962,143793083,143792867,143792635,143792405,143792133,143791913,143791440,143791308 Gene ID= ENSG00000180900.18 TPM= 13.58 Transcript Type= NA chr8 143816377 143829352 143816377 143829352 - ENST00000349157.10@PUF60 ENST00000349157.10 protein_coding 143829280,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377 143829352,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819 Gene ID= ENSG00000179950.13 TPM= 171.9 Transcript Type= protein_coding chr8 143816377 143829303 143816377 143829303 - ENST00000456095.6@PUF60 ENST00000456095.6 protein_coding 143829280,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377 143829303,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819 Gene ID= ENSG00000179950.13 TPM= 4.6 Transcript Type= protein_coding chr8 143816377 143829039 143816377 143829039 - ENST00000313352.11@PUF60 ENST00000313352.11 protein_coding 143828984,143824313,143821818,143821597,143818373,143818193,143817862,143817592,143817331,143816910,143816377 143829039,143824399,143821913,143821686,143818534,143818285,143818075,143817782,143817466,143817145,143816819 Gene ID= ENSG00000179950.13 TPM= 7.09 Transcript Type= protein_coding chr8 143816377 143829026 143816377 143829026 - ENST00000453551.6@PUF60 ENST00000453551.6 protein_coding 143828984,143824313,143821818,143821597,143820666,143818373,143818193,143817862,143817592,143817331,143816910,143816377 143829026,143824399,143821913,143821686,143820716,143818534,143818285,143818075,143817782,143817466,143817145,143816819 Gene ID= ENSG00000179950.13 TPM= 4 Transcript Type= protein_coding chr8 143833721 143840974 143833721 143840974 - ENST00000442628.6@NRBP2 ENST00000442628.6 protein_coding 143840706,143840107,143839929,143839736,143839509,143839314,143839172,143839017,143838883,143838680,143837623,143837407,143837249,143837039,143836127,143835967,143835820,143833721 143840974,143840229,143840030,143839825,143839549,143839408,143839195,143839100,143838938,143838775,143837755,143837509,143837299,143837174,143836180,143836030,143835875,143835730 Gene ID= ENSG00000185189.17 TPM= 6.79 Transcript Type= protein_coding chr8 143924846 143943981 143924846 143943981 - transcript3243.chr8.nic@PLEC transcript3243.chr8.nic protein_coding 143943779,143938631,143938151,143937165,143936979,143935848,143935198,143935011,143934810,143934635,143934318,143933998,143933197,143932793,143932635,143932400,143932130,143931937,143931534,143930384,143930144,143929936,143929646,143929414,143929103,143927854,143927410,143927252,143926977,143926784,143924846 143943981,143938692,143938240,143937242,143937071,143936014,143935313,143935117,143934929,143934730,143934445,143934091,143933351,143933111,143932712,143932561,143932234,143932032,143931659,143930536,143930298,143930062,143929829,143929571,143929281,143927992,143927766,143927335,143927081,143926882,143925884 Gene ID= ENSG00000178209.14 TPM= 1.81 Transcript Type= NA chr8 143977153 143986467 143977153 143986467 - transcript3249.chr8.nic@PARP10 transcript3249.chr8.nic protein_coding 143986358,143986055,143985721,143985412,143984544,143984210,143983167,143982932,143977907,143977153 143986467,143986233,143985975,143985648,143985328,143984431,143984104,143983065,143978081,143977830 Gene ID= ENSG00000178685.13 TPM= 19.47 Transcript Type= NA chr8 143977160 143986454 143977160 143986454 - ENST00000313028.11@PARP10 ENST00000313028.11 protein_coding 143986358,143986055,143985721,143985412,143984544,143984210,143984008,143983167,143982932,143977907,143977160 143986454,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830 Gene ID= ENSG00000178685.13 TPM= 267.59 Transcript Type= protein_coding chr8 143977153 143986446 143977153 143986446 - ENST00000524918.5@PARP10 ENST00000524918.5 protein_coding 143986358,143986055,143985721,143985412,143984544,143984210,143984035,143983167,143982932,143977907,143977153 143986446,143986233,143985975,143985648,143985328,143984431,143984104,143983811,143983065,143978081,143977830 Gene ID= ENSG00000178685.13 TPM= 14.04 Transcript Type= protein_coding chr8 143990045 143993426 143990045 143993426 + transcript3256.chr8.nic@GRINA transcript3256.chr8.nic protein_coding 143990045,143991200,143991692,143991878,143992465,143992692 143990199,143991602,143991804,143992373,143992608,143993426 Gene ID= ENSG00000178719.16 TPM= 11.17 Transcript Type= NA chr8 143990100 143993415 143990100 143993415 + ENST00000395068.8@GRINA ENST00000395068.8 protein_coding 143990100,143991200,143991692,143991878,143992245,143992465,143992692 143990199,143991602,143991804,143992078,143992373,143992608,143993415 Gene ID= ENSG00000178719.16 TPM= 85.87 Transcript Type= protein_coding chr8 143990058 143993415 143990058 143993415 + ENST00000313269.5@GRINA ENST00000313269.5 protein_coding 143990058,143991200,143991692,143991878,143992245,143992465,143992692 143990311,143991602,143991804,143992078,143992373,143992608,143993415 Gene ID= ENSG00000178719.16 TPM= 35.16 Transcript Type= protein_coding chr8 144051264 144060743 144051264 144060743 - transcript3263.chr8.nic@OPLAH transcript3263.chr8.nic protein_coding 144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144052983,144052766,144052449,144052169,144051916,144051729,144051264 144060743,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144052900,144052598,144052326,144052076,144051826,144051472 Gene ID= ENSG00000178814.16 TPM= 3.62 Transcript Type= NA chr8 144051266 144060703 144051266 144060703 - ENST00000618853.4@OPLAH ENST00000618853.4 protein_coding 144060653,144059862,144059599,144058980,144058773,144058496,144058239,144058010,144057856,144057448,144057208,144056948,144056618,144056385,144056147,144055788,144055029,144054812,144054561,144053209,144052983,144052766,144052449,144052169,144051916,144051729,144051266 144060703,144060085,144059790,144059079,144058896,144058691,144058404,144058148,144057923,144057713,144057320,144057118,144056755,144056523,144056259,144055939,144055189,144054913,144054735,144053393,144053129,144052900,144052598,144052326,144052076,144051826,144051472 Gene ID= ENSG00000178814.16 TPM= 124.06 Transcript Type= protein_coding chr8 144078626 144080647 144078626 144080647 + ENST00000316052.5@EXOSC4 ENST00000316052.5 protein_coding 144078626,144079943,144080242 144078899,144080149,144080647 Gene ID= ENSG00000178896.8 TPM= 51.62 Transcript Type= protein_coding chr8 144082560 144086221 144082560 144086221 + transcript3296.chr8.nic@GPAA1 transcript3296.chr8.nic protein_coding 144082560,144083124,144083389,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882 144082804,144083303,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086221 Gene ID= ENSG00000197858.10 TPM= 15.81 Transcript Type= NA chr8 144082610 144086216 144082610 144086216 + ENST00000355091.8@GPAA1 ENST00000355091.8 protein_coding 144082610,144083124,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882 144082804,144083303,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216 Gene ID= ENSG00000197858.10 TPM= 468.13 Transcript Type= protein_coding chr8 144082668 144086216 144082668 144086216 + ENST00000361036.10@GPAA1 ENST00000361036.10 protein_coding 144082668,144083389,144083714,144083939,144084134,144084413,144084722,144085043,144085289,144085573,144085882 144082804,144083500,144083861,144084040,144084330,144084609,144084875,144085138,144085479,144085743,144086216 Gene ID= ENSG00000197858.10 TPM= 4.49 Transcript Type= protein_coding chr8 144095027 144097525 144095027 144097525 + ENST00000318911.4@CYC1 ENST00000318911.4 protein_coding 144095027,144095833,144096124,144096337,144096584,144097034,144097232 144095228,144096029,144096250,144096494,144096744,144097134,144097525 Gene ID= ENSG00000179091.4 TPM= 694.78 Transcript Type= protein_coding chr8 144095039 144097525 144095039 144097525 + ENST00000533444.1@CYC1 ENST00000533444.1 protein_coding 144095039,144096124,144096337,144096584,144097034,144097232 144096029,144096250,144096494,144096744,144097134,144097525 Gene ID= ENSG00000179091.4 TPM= 17.43 Transcript Type= retained_intron chr8 144098635 144104911 144098635 144104911 - transcript3322.chr8.nic@SHARPIN transcript3322.chr8.nic protein_coding 144103553,144103051,144099929,144099703,144099510,144099081,144098866,144098635 144104911,144103225,144100069,144099844,144099618,144099430,144098994,144098788 Gene ID= ENSG00000179526.16 TPM= 17.39 Transcript Type= NA chr8 144098637 144104190 144098637 144104190 - ENST00000398712.6@SHARPIN ENST00000398712.6 protein_coding 144103553,144103051,144099929,144099703,144099510,144099277,144099081,144098866,144098637 144104190,144103225,144100069,144099844,144099618,144099430,144099205,144098994,144098788 Gene ID= ENSG00000179526.16 TPM= 144.46 Transcript Type= protein_coding chr8 144104499 144107611 144104499 144107611 + ENST00000322428.9@MAF1 ENST00000322428.9 protein_coding 144104499,144105640,144105869,144106076,144106343,144106555,144106835,144107088 144104858,144105766,144105997,144106241,144106464,144106674,144106963,144107611 Gene ID= ENSG00000179632.9 TPM= 346.52 Transcript Type= protein_coding chr8 144104512 144107611 144104512 144107611 + ENST00000534585.5@MAF1 ENST00000534585.5 protein_coding 144104512,144105640,144105869,144106076,144106343,144106835,144107088 144104858,144105766,144105997,144106241,144106674,144106963,144107611 Gene ID= ENSG00000179632.9 TPM= 15.1 Transcript Type= protein_coding chr8 144137739 144140850 144137739 144140850 + transcript3361.chr8.nic@HGH1 transcript3361.chr8.nic protein_coding 144137739,144138507,144138715,144139189,144139388 144138428,144138607,144139100,144139311,144140850 Gene ID= ENSG00000235173.6 TPM= 9.51 Transcript Type= NA chr8 144137781 144140718 144137781 144140718 + transcript3363.chr8.nic@HGH1 transcript3363.chr8.nic protein_coding 144137781,144138715,144139189,144139388 144138428,144139100,144139311,144140718 Gene ID= ENSG00000235173.6 TPM= 3.17 Transcript Type= NA chr8 144137793 144140716 144137793 144140716 + transcript3364.chr8.nic@HGH1 transcript3364.chr8.nic protein_coding 144137793,144138507,144139388 144138428,144139311,144140716 Gene ID= ENSG00000235173.6 TPM= 3.17 Transcript Type= NA chr8 144137769 144140843 144137769 144140843 + ENST00000347708.4@HGH1 ENST00000347708.4 protein_coding 144137769,144138507,144138715,144139009,144139189,144139388 144138428,144138607,144138813,144139100,144139311,144140843 Gene ID= ENSG00000235173.6 TPM= 98.25 Transcript Type= protein_coding chr8 144148006 144262100 144148006 144262100 + transcript3368.chr8.nic@MROH1 transcript3368.chr8.nic protein_coding 144148006,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655 144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144262100 Gene ID= ENSG00000179832.17 TPM= 18.93 Transcript Type= NA chr8 144148016 144261939 144148016 144261939 + transcript3378.chr8.nnic@MROH1 transcript3378.chr8.nnic protein_coding 144148016,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261179,144261284,144261655 144148076,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261939 Gene ID= ENSG00000179832.17 TPM= 4.68 Transcript Type= NA chr8 144148016 144261937 144148016 144261937 + transcript3380.chr8.nic@MROH1 transcript3380.chr8.nic protein_coding 144148016,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655 144148076,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261937 Gene ID= ENSG00000179832.17 TPM= 12.29 Transcript Type= NA chr8 144148016 144261927 144148016 144261927 + transcript3384.chr8.nic@MROH1 transcript3384.chr8.nic protein_coding 144148016,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240992,144241395,144242369,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655 144148076,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144240677,144241111,144241517,144242515,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261927 Gene ID= ENSG00000179832.17 TPM= 3.23 Transcript Type= NA chr8 144148006 144213463 144148006 144213463 + transcript3404.chr8.nic@MROH1 transcript3404.chr8.nic protein_coding 144148006,144160970,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144212994 144148076,144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144213463 Gene ID= ENSG00000179832.17 TPM= 1.81 Transcript Type= NA chr8 144161025 144261927 144161025 144261927 + ENST00000528919.5@MROH1 ENST00000528919.5 protein_coding 144161025,144163771,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655 144161089,144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261927 Gene ID= ENSG00000179832.17 TPM= 4.44 Transcript Type= protein_coding chr8 144163770 144261940 144163770 144261940 + ENST00000326134.9@MROH1 ENST00000326134.9 protein_coding 144163770,144168295,144179455,144180178,144180425,144190784,144191715,144192309,144199122,144200428,144220600,144223108,144238756,144239035,144239323,144239614,144240101,144240570,144240992,144241395,144242369,144242602,144243494,144243863,144244222,144244444,144245156,144247301,144247567,144248877,144250212,144254813,144255509,144258777,144259240,144259911,144260186,144260677,144260907,144261114,144261284,144261655 144163848,144168440,144179586,144180340,144180523,144190935,144191855,144192401,144199200,144200541,144220673,144223230,144238863,144239179,144239363,144239755,144240153,144240677,144241111,144241517,144242515,144242628,144243616,144243942,144244336,144244539,144245260,144247436,144247679,144249029,144250366,144254978,144255705,144258914,144259354,144260057,144260374,144260832,144261041,144261216,144261349,144261940 Gene ID= ENSG00000179832.17 TPM= 8.96 Transcript Type= protein_coding chr8 144261937 144291457 144261937 144291457 - transcript3396.chr8.nic@BOP1 transcript3396.chr8.nic protein_coding 144291272,144289095,144276224,144264917,144264714,144264515,144264225,144263981,144263692,144263478,144263221,144262853,144262588,144262396,144261937 144291457,144289304,144276304,144265071,144264831,144264616,144264437,144264142,144263911,144263610,144263401,144263141,144262672,144262503,144262317 Gene ID= ENSG00000261236.7 TPM= 5.43 Transcript Type= NA chr8 144262046 144270959 144262046 144270959 - transcript3400.chr8.nnic@BOP1 transcript3400.chr8.nnic protein_coding 144270786,144264917,144264714,144264515,144264225,144263981,144263831,144263692,144263478,144263221,144262853,144262588,144262396,144262046 144270959,144265071,144264831,144264616,144264437,144264142,144263911,144263761,144263610,144263401,144263141,144262672,144262503,144262317 Gene ID= ENSG00000261236.7 TPM= 3.17 Transcript Type= NA chr8 144262102 144291370 144262102 144291370 - ENST00000569669.5@BOP1 ENST00000569669.5 protein_coding 144291272,144289095,144276224,144264917,144264714,144264515,144264225,144263981,144263831,144263692,144263478,144263221,144262853,144262588,144262396,144262102 144291370,144289304,144276304,144265071,144264831,144264616,144264437,144264142,144263911,144263761,144263610,144263401,144263141,144262672,144262503,144262317 Gene ID= ENSG00000261236.7 TPM= 64.29 Transcript Type= protein_coding chr8 144291585 144314727 144291585 144314727 + transcript3435.chr8.nic@HSF1 transcript3435.chr8.nic protein_coding 144291585,144308906,144309455,144309772,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125 144291874,144309014,144309591,144309896,144311382,144311601,144311836,144312244,144313616,144313911,144314054,144314727 Gene ID= ENSG00000185122.10 TPM= 13.66 Transcript Type= NA chr8 144291598 144314722 144291598 144314722 + ENST00000528838.5@HSF1 ENST00000528838.5 protein_coding 144291598,144308906,144309455,144309772,144311174,144311321,144311505,144311700,144311963,144313511,144313846,144313985,144314125 144291874,144309014,144309591,144309896,144311249,144311382,144311601,144311836,144312244,144313616,144313911,144314054,144314722 Gene ID= ENSG00000185122.10 TPM= 247.9 Transcript Type= protein_coding chr8 144314584 144326910 144314584 144326910 - ENST00000528718.5@DGAT1 ENST00000528718.5 protein_coding 144326437,144321321,144319028,144318835,144318699,144318461,144318261,144318095,144317914,144317784,144317671,144317544,144317333,144317187,144317022,144316853,144314584 144326910,144321408,144319068,144318920,144318751,144318566,144318362,144318169,144318017,144317822,144317712,144317588,144317445,144317252,144317109,144316915,144316709 Gene ID= ENSG00000185000.11 TPM= 239.06 Transcript Type= protein_coding chr8 144355427 144358524 144355427 144358524 - transcript3452.chr8.nnic@FBXL6 transcript3452.chr8.nnic protein_coding 144357628,144356990,144356808,144356600,144356300,144355968,144355427 144358524,144357121,144356915,144356713,144356531,144356214,144355678 Gene ID= ENSG00000182325.10 TPM= 7.85 Transcript Type= NA chr8 144355427 144358560 144355427 144358560 - transcript3456.chr8.nic@FBXL6 transcript3456.chr8.nic protein_coding 144356990,144356808,144356600,144356300,144355968,144355427 144358560,144356915,144356713,144356531,144356214,144355678 Gene ID= ENSG00000182325.10 TPM= 9.66 Transcript Type= NA chr8 144355431 144358512 144355431 144358512 - ENST00000331890.5@FBXL6 ENST00000331890.5 protein_coding 144358032,144357628,144357439,144356990,144356808,144356600,144356300,144355968,144355431 144358512,144357786,144357502,144357121,144356915,144356713,144356531,144356214,144355678 Gene ID= ENSG00000182325.10 TPM= 13.28 Transcript Type= protein_coding chr8 144358593 144361241 144358593 144361241 + ENST00000532887.5@SLC52A2 ENST00000532887.5 protein_coding 144358593,144359184,144359623,144360590,144360803 144359065,144359423,144360493,144360713,144361241 Gene ID= ENSG00000185803.8 TPM= 84.22 Transcript Type= protein_coding chr8 144358557 144361270 144358557 144361270 + ENST00000530047.5@SLC52A2 ENST00000530047.5 protein_coding 144358557,144359184,144359623,144360590,144360803 144358610,144359423,144360493,144360713,144361270 Gene ID= ENSG00000185803.8 TPM= 12.68 Transcript Type= protein_coding chr8 144374017 144393236 144374017 144393236 + transcript3479.chr8.nic@ADCK5 transcript3479.chr8.nic protein_coding 144374017,144379387,144383081,144389263,144390671,144390856,144391134,144391361,144391580,144391783,144391941,144392092,144392254,144392445,144392776,144392969 144374107,144379490,144383230,144389336,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236 Gene ID= ENSG00000173137.11 TPM= 1.97 Transcript Type= NA chr8 144374080 144393236 144374080 144393236 + transcript3481.chr8.nnic@ADCK5 transcript3481.chr8.nnic protein_coding 144374080,144375553,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391783,144391941,144392092,144392254,144392445,144392776,144392969 144374107,144375637,144379490,144383230,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236 Gene ID= ENSG00000173137.11 TPM= 3.78 Transcript Type= NA chr8 144374017 144393236 144374017 144393236 + transcript3487.chr8.nnic@ADCK5 transcript3487.chr8.nnic protein_coding 144374017,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391819,144391941,144392092,144392254,144392445,144392776,144392969 144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236 Gene ID= ENSG00000173137.11 TPM= 3.78 Transcript Type= NA chr8 144374017 144393242 144374017 144393242 + transcript3491.chr8.nic@ADCK5 transcript3491.chr8.nic protein_coding 144374017,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391941,144392092,144392254,144392445,144392776 144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391866,144392022,144392170,144392345,144392697,144393242 Gene ID= ENSG00000173137.11 TPM= 1.81 Transcript Type= NA chr8 144374017 144393236 144374017 144393236 + transcript3492.chr8.nic@ADCK5 transcript3492.chr8.nic protein_coding 144374017,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391941,144392445,144392776,144392969 144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391866,144392345,144392697,144392892,144393236 Gene ID= ENSG00000173137.11 TPM= 2.87 Transcript Type= NA chr8 144374052 144393236 144374052 144393236 + ENST00000308860.10@ADCK5 ENST00000308860.10 protein_coding 144374052,144379387,144383081,144390671,144390856,144391134,144391361,144391580,144391783,144391941,144392092,144392254,144392445,144392776,144392969 144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391711,144391866,144392022,144392170,144392345,144392697,144392892,144393236 Gene ID= ENSG00000173137.11 TPM= 28.23 Transcript Type= protein_coding chr8 144374046 144393242 144374046 144393242 + ENST00000529654.5@ADCK5 ENST00000529654.5 protein_coding 144374046,144379387,144383081,144390671,144390861,144391134,144391361,144391580,144391941,144392092,144392254,144392445,144392776,144392969 144374107,144379490,144383230,144390746,144391056,144391274,144391474,144391866,144392022,144392170,144392345,144392697,144392892,144393242 Gene ID= ENSG00000173137.11 TPM= 10.11 Transcript Type= nonsense_mediated_decay chr8 144393231 144409349 144393231 144409349 - ENST00000616140.1@CPSF1 ENST00000616140.1 protein_coding 144409289,144409015,144401646,144401430,144401211,144400924,144400671,144400354,144400166,144399992,144399781,144399588,144399452,144399276,144399128,144398958,144398779,144398525,144398302,144397954,144397743,144397487,144397207,144396840,144396598,144396348,144395435,144395265,144395098,144394882,144394644,144394379,144394234,144394113,144393883,144393667,144393452,144393231 144409349,144409172,144401673,144401563,144401291,144401075,144400817,144400493,144400276,144400085,144399868,144399710,144399503,144399373,144399202,144399038,144398868,144398638,144398443,144398132,144397879,144397661,144397413,144396929,144396741,144396500,144395551,144395355,144395182,144395023,144394796,144394555,144394300,144394160,144394038,144393796,144393590,144393365 Gene ID= ENSG00000071894.16 TPM= 113.19 Transcript Type= protein_coding chr8 144410395 144413585 144410395 144413585 - ENST00000529462.5@SLC39A4 ENST00000529462.5 protein_coding 144413513,144413237,144410395 144413585,144413389,144412946 Gene ID= ENSG00000147804.9 TPM= 1.81 Transcript Type= retained_intron chr8 144412414 144413569 144412414 144413569 - ENST00000530807.5@SLC39A4 ENST00000530807.5 protein_coding 144413513,144412759,144412414 144413569,144412946,144412666 Gene ID= ENSG00000147804.9 TPM= 3.47 Transcript Type= processed_transcript chr8 144412415 144413591 144412415 144413591 - ENST00000531013.1@SLC39A4 ENST00000531013.1 protein_coding 144413237,144412759,144412415 144413591,144412946,144412666 Gene ID= ENSG00000147804.9 TPM= 1.2 Transcript Type= processed_transcript chr8 144412414 144413586 144412414 144413586 - ENST00000532718.5@SLC39A4 ENST00000532718.5 protein_coding 144413513,144413237,144412759,144412414 144413586,144413389,144412946,144412666 Gene ID= ENSG00000147804.9 TPM= 5.28 Transcript Type= processed_transcript chr8 144423602 144428543 144423602 144428543 - transcript3516.chr8.nic@VPS28 transcript3516.chr8.nic protein_coding 144428489,144426909,144426180,144426026,144424946,144424718,144424215,144424041,144423602 144428543,144426979,144426208,144426063,144425772,144424819,144424268,144424132,144423922 Gene ID= ENSG00000160948.13 TPM= 5.43 Transcript Type= NA chr8 144423601 144428563 144423601 144428563 - ENST00000292510.5@VPS28 ENST00000292510.5 protein_coding 144428489,144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423601 144428563,144426979,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922 Gene ID= ENSG00000160948.13 TPM= 164.69 Transcript Type= protein_coding chr8 144423617 144426983 144423617 144426983 - ENST00000526054.5@VPS28 ENST00000526054.5 protein_coding 144426909,144426180,144426026,144425683,144424946,144424718,144424215,144424041,144423617 144426983,144426208,144426063,144425772,144425051,144424819,144424268,144424132,144423922 Gene ID= ENSG00000160948.13 TPM= 8.03 Transcript Type= protein_coding chr8 144428808 144439875 144428808 144439875 - transcript3502.chr8.nnic@TONSL transcript3502.chr8.nnic protein_coding 144439569,144438653,144438471,144437027,144436757,144436558,144435658,144435474,144435017,144434811,144433978,144433588,144432285,144431078,144430404,144428808 144439875,144438735,144438560,144437099,144436920,144436681,144436418,144435550,144435170,144434889,144434279,144433759,144432460,144431151,144430537,144429336 Gene ID= ENSG00000160949.16 TPM= 2.72 Transcript Type= NA chr8 144428808 144439768 144428808 144439768 - transcript3503.chr8.nnic@TONSL transcript3503.chr8.nnic protein_coding 144439624,144438653,144438471,144437027,144436757,144436558,144435658,144435474,144435017,144434811,144433978,144433588,144432285,144431078,144430404,144428808 144439768,144438735,144438560,144437099,144436920,144436681,144436418,144435550,144435170,144434889,144434279,144433759,144432460,144431151,144430537,144429336 Gene ID= ENSG00000160949.16 TPM= 1.81 Transcript Type= NA chr8 144428808 144444444 144428808 144444444 - ENST00000409379.7@TONSL ENST00000409379.7 protein_coding 144444390,144444180,144443882,144443138,144442677,144442241,144442037,144440966,144440718,144440351,144440021,144438653,144438471,144437027,144436757,144436558,144435658,144435474,144435017,144434811,144433978,144433588,144432285,144431078,144430404,144428808 144444444,144444275,144444024,144443321,144442806,144442412,144442151,144441111,144440870,144440476,144440210,144438735,144438560,144437099,144436920,144436681,144436418,144435550,144435170,144434889,144434279,144433759,144432460,144431151,144430537,144429336 Gene ID= ENSG00000160949.16 TPM= 9.96 Transcript Type= protein_coding chr8 144451120 144462877 144451120 144462877 - transcript3573.chr8.nnic@CYHR1 transcript3573.chr8.nnic protein_coding 144462283,144453222,144451120 144462877,144453411,144452570 Gene ID= ENSG00000187954.12 TPM= 7.7 Transcript Type= NA chr8 144451120 144457928 144451120 144457928 - ENST00000533173.1@CYHR1 ENST00000533173.1 protein_coding 144453222,144451120 144457928,144452570 Gene ID= ENSG00000187954.12 TPM= 7.24 Transcript Type= retained_intron chr8 144449931 144462861 144449931 144462861 - ENST00000530374.5@CYHR1 ENST00000530374.5 protein_coding 144462283,144453222,144452359,144449931 144462861,144453460,144452570,144450770 Gene ID= ENSG00000187954.12 TPM= 45.28 Transcript Type= protein_coding chr8 144463817 144465677 144463817 144465677 - ENST00000306145.9@CYHR1 ENST00000306145.9 protein_coding 144465353,144464809,144463817 144465677,144465096,144464612 Gene ID= ENSG00000187954.12 TPM= 61.28 Transcript Type= protein_coding chr8 144463817 144465489 144463817 144465489 - ENST00000403000.6@CYHR1 ENST00000403000.6 protein_coding 144464809,144463817 144465489,144464612 Gene ID= ENSG00000187954.12 TPM= 51.32 Transcript Type= protein_coding chr8 144463817 144465648 144463817 144465648 - ENST00000424149.6@CYHR1 ENST00000424149.6 protein_coding 144465571,144464809,144463817 144465648,144465096,144464612 Gene ID= ENSG00000187954.12 TPM= 14.19 Transcript Type= protein_coding chr8 144466034 144474115 144466034 144474115 + transcript3547.chr8.nnic@KIFC2 transcript3547.chr8.nnic protein_coding 144466034,144466461,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795 144466102,144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144474115 Gene ID= ENSG00000167702.11 TPM= 3.08 Transcript Type= NA chr8 144466034 144474115 144466034 144474115 + transcript3548.chr8.nnic@KIFC2 transcript3548.chr8.nnic protein_coding 144466034,144466461,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795,144473132 144466102,144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144473051,144474115 Gene ID= ENSG00000167702.11 TPM= 4.89 Transcript Type= NA chr8 144466338 144474115 144466338 144474115 + transcript3549.chr8.nnic@KIFC2 transcript3549.chr8.nnic protein_coding 144466338,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795,144473132 144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144473051,144474115 Gene ID= ENSG00000167702.11 TPM= 3.98 Transcript Type= NA chr8 144466034 144474115 144466034 144474115 + transcript3551.chr8.nnic@KIFC2 transcript3551.chr8.nnic protein_coding 144466034,144466461,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795 144466102,144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144474115 Gene ID= ENSG00000167702.11 TPM= 4.89 Transcript Type= NA chr8 144466043 144474202 144466043 144474202 + ENST00000301332.2@KIFC2 ENST00000301332.2 protein_coding 144466043,144466760,144466959,144467203,144467485,144467714,144467859,144468329,144468536,144468725,144469271,144469490,144471942,144472138,144472361,144472577,144472795 144466518,144466838,144467110,144467341,144467630,144467779,144467987,144468406,144468650,144468834,144469379,144469647,144472046,144472259,144472484,144472706,144474202 Gene ID= ENSG00000167702.11 TPM= 3.08 Transcript Type= protein_coding chr8 144478006 144502126 144478006 144502126 + transcript3585.chr8.nic@PPP1R16A transcript3585.chr8.nic protein_coding 144478006,144490034,144496461,144497410,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520 144478127,144490212,144497293,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502126 Gene ID= ENSG00000160972.9 TPM= 3.62 Transcript Type= NA chr8 144477952 144502126 144477952 144502126 + transcript3588.chr8.nic@PPP1R16A transcript3588.chr8.nic protein_coding 144477952,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520 144478127,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502126 Gene ID= ENSG00000160972.9 TPM= 74.41 Transcript Type= NA chr8 144478297 144502126 144478297 144502126 + transcript3592.chr8.nic@PPP1R16A transcript3592.chr8.nic protein_coding 144478297,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520 144478522,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502126 Gene ID= ENSG00000160972.9 TPM= 12.83 Transcript Type= NA chr8 144478348 144502126 144478348 144502126 + transcript3593.chr8.nnic@PPP1R16A transcript3593.chr8.nnic protein_coding 144478348,144490034,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520 144478553,144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502126 Gene ID= ENSG00000160972.9 TPM= 4.68 Transcript Type= NA chr8 144477952 144502126 144477952 144502126 + transcript3595.chr8.nic@PPP1R16A transcript3595.chr8.nic protein_coding 144477952,144490034,144496461,144498770,144498916,144500096,144500487,144500686,144500842,144501129,144501520 144478127,144490212,144497453,144498840,144499061,144500391,144500612,144500761,144500971,144501294,144502126 Gene ID= ENSG00000160972.9 TPM= 3.62 Transcript Type= NA chr8 144490030 144502121 144490030 144502121 + ENST00000292539.8@PPP1R16A ENST00000292539.8 protein_coding 144490030,144496461,144498770,144498916,144500096,144500267,144500487,144500686,144500842,144501129,144501520 144490212,144497453,144498840,144499061,144500199,144500391,144500612,144500761,144500971,144501294,144502121 Gene ID= ENSG00000160972.9 TPM= 5.59 Transcript Type= protein_coding chr8 144501089 144502120 144501089 144502120 + ENST00000528430.2@PPP1R16A ENST00000528430.2 protein_coding 144501089,144501520 144501294,144502120 Gene ID= ENSG00000160972.9 TPM= 44.37 Transcript Type= retained_intron chr8 144502973 144507174 144502973 144507174 + ENST00000528431.5@GPT ENST00000528431.5 protein_coding 144502973,144504301,144504604,144504771,144504998,144505246,144505848,144505995,144506232,144506501,144506731,144506910 144503125,144504466,144504693,144504879,144505131,144505489,144505927,144506131,144506406,144506656,144506843,144507174 Gene ID= ENSG00000167701.13 TPM= 3.62 Transcript Type= protein_coding chr8 144508246 144513671 144508246 144513671 + transcript3626.chr8.nnic@MFSD3 transcript3626.chr8.nnic protein_coding 144508246,144510360,144510598,144510794,144511739 144510015,144510507,144510722,144510903,144513671 Gene ID= ENSG00000167700.8 TPM= 5.73 Transcript Type= NA chr8 144508830 144513670 144508830 144513670 + transcript3636.chr8.nic@MFSD3 transcript3636.chr8.nic protein_coding 144508830,144510360,144510598,144510794 144510015,144510507,144510722,144513670 Gene ID= ENSG00000167700.8 TPM= 3.92 Transcript Type= NA chr8 144509068 144511217 144509068 144511217 + transcript3638.chr8.nic@MFSD3 transcript3638.chr8.nic protein_coding 144509068,144510598,144510794,144510991 144510015,144510722,144510903,144511217 Gene ID= ENSG00000167700.8 TPM= 2.72 Transcript Type= NA chr8 144509068 144513670 144509068 144513670 + transcript3645.chr8.nic@MFSD3 transcript3645.chr8.nic protein_coding 144509068,144510598,144510794 144510015,144510722,144513670 Gene ID= ENSG00000167700.8 TPM= 2.72 Transcript Type= NA chr8 144509074 144511213 144509074 144511213 + ENST00000301327.4@MFSD3 ENST00000301327.4 protein_coding 144509074,144510360,144510598,144510794,144510991 144510015,144510507,144510722,144510903,144511213 Gene ID= ENSG00000167700.8 TPM= 58.86 Transcript Type= protein_coding chr8 144517960 144525171 144517960 144525171 + transcript3640.chr8.nic@LRRC14 transcript3640.chr8.nic protein_coding 144517960,144519701,144520238,144520911 144518041,144520054,144520822,144525171 Gene ID= ENSG00000160959.7 TPM= 29.43 Transcript Type= NA chr8 144518007 144525178 144518007 144525178 + ENST00000292524.5@LRRC14 ENST00000292524.5 protein_coding 144518007,144519615,144520238,144520911 144518041,144520054,144520822,144525178 Gene ID= ENSG00000160959.7 TPM= 35.77 Transcript Type= protein_coding chr8 144521802 144529130 144521802 144529130 - transcript3621.chr8.nic@LRRC24 transcript3621.chr8.nic protein_coding 144528761,144528024,144526960,144524816,144524441,144524110,144521802 144529130,144528072,144527787,144525033,144524719,144524278,144523409 Gene ID= ENSG00000254402.6 TPM= 19.02 Transcript Type= NA chr8 144522377 144527018 144522377 144527018 - ENST00000529415.6@LRRC24 ENST00000529415.6 protein_coding 144526960,144524816,144524441,144524110,144522377 144527018,144525033,144524719,144524278,144523409 Gene ID= ENSG00000254402.6 TPM= 28.98 Transcript Type= protein_coding chr8 144526252 144529132 144526252 144529132 - ENST00000534680.5@C8orf82 ENST00000534680.5 protein_coding 144528761,144528024,144526960,144526252 144529132,144528072,144527787,144526639 Gene ID= ENSG00000213563.6 TPM= 111.38 Transcript Type= nonsense_mediated_decay chr8 144526219 144529092 144526219 144529092 - ENST00000313465.5@C8orf82 ENST00000313465.5 protein_coding 144528761,144526219 144529092,144528072 Gene ID= ENSG00000213563.6 TPM= 3.62 Transcript Type= protein_coding chr8 144720906 144755439 144720906 144755439 - transcript3652.chr8.nnic@ZNF251 transcript3652.chr8.nnic protein_coding 144755136,144754696,144754192,144753683,144720906 144755439,144754803,144754321,144753796,144723382 Gene ID= ENSG00000198169.8 TPM= 2.11 Transcript Type= NA chr8 144720906 144755492 144720906 144755492 - transcript3654.chr8.nic@ZNF251 transcript3654.chr8.nic protein_coding 144754696,144754192,144753683,144720906 144755492,144754321,144753796,144723382 Gene ID= ENSG00000198169.8 TPM= 5.73 Transcript Type= NA chr8 144720906 144755532 144720906 144755532 - transcript3655.chr8.nic@ZNF251 transcript3655.chr8.nic protein_coding 144754192,144753683,144720906 144755532,144753796,144723382 Gene ID= ENSG00000198169.8 TPM= 2.11 Transcript Type= NA chr8 144773114 144787325 144773114 144787325 - ENST00000429371.6@ZNF34 ENST00000429371.6 protein_coding 144787279,144780228,144778439,144778038,144777458,144773114 144787325,144780280,144778525,144778164,144777577,144774605 Gene ID= ENSG00000196378.11 TPM= 6.34 Transcript Type= protein_coding chr8 144789769 144792389 144789769 144792389 - ENST00000394920.6@RPL8 ENST00000394920.6 protein_coding 144792245,144791992,144791773,144791277,144790355,144789769 144792389,144792140,144791914,144791495,144790470,144789962 Gene ID= ENSG00000161016.17 TPM= 91.91 Transcript Type= protein_coding chr8 144789785 144792351 144789785 144792351 - ENST00000528957.5@RPL8 ENST00000528957.5 protein_coding 144791992,144791773,144791277,144790355,144789785 144792351,144791914,144791495,144790470,144789962 Gene ID= ENSG00000161016.17 TPM= 1.36 Transcript Type= protein_coding chr8 144798923 144810075 144798923 144810075 + transcript3673.chr8.nnic@ZNF517 transcript3673.chr8.nnic protein_coding 144798923,144802870,144803641,144804125,144807191 144799503,144802947,144803767,144804238,144810075 Gene ID= ENSG00000197363.9 TPM= 1.81 Transcript Type= NA chr8 144827560 144843686 144827560 144843686 + transcript3682.chr8.nnic@ZNF7 transcript3682.chr8.nnic protein_coding 144827560,144837391,144841355 144827609,144837507,144843686 Gene ID= ENSG00000147789.15 TPM= 3.62 Transcript Type= NA chr8 144827559 144843220 144827559 144843220 + ENST00000446747.6@ZNF7 ENST00000446747.6 protein_coding 144827559,144829043,144829445,144837391,144841355 144827609,144829090,144829604,144837507,144843220 Gene ID= ENSG00000147789.15 TPM= 2.72 Transcript Type= protein_coding chr8 144850166 144853067 144850166 144853067 - ENST00000402718.4@COMMD5 ENST00000402718.4 protein_coding 144852993,144850166 144853067,144851395 Gene ID= ENSG00000170619.9 TPM= 15.85 Transcript Type= protein_coding chr8 144850219 144853034 144850219 144853034 - ENST00000305103.3@COMMD5 ENST00000305103.3 protein_coding 144852839,144850219 144853034,144851395 Gene ID= ENSG00000170619.9 TPM= 15.85 Transcript Type= protein_coding chr8 144881139 144901431 144881139 144901431 - ENST00000417550.6@ZNF250 ENST00000417550.6 protein_coding 144901399,144890308,144889933,144889581,144886840,144881139 144901431,144890403,144890059,144889694,144886902,144882836 Gene ID= ENSG00000196150.13 TPM= 1.81 Transcript Type= protein_coding chr8 144930360 144950888 144930360 144950888 - ENST00000611477.1@ZNF16 ENST00000611477.1 protein_coding 144950797,144946011,144930360 144950888,144946215,144932590 Gene ID= ENSG00000170631.14 TPM= 15.39 Transcript Type= protein_coding chr8 144973595 145002875 144973595 145002875 - transcript3692.chr8.nnic@ZNF252P transcript3692.chr8.nnic transcribed_unitary_pseudogene 145002532,145000352,144999603,144996507,144994479,144973595 145002875,145000538,144999769,144996607,144994592,144978553 Gene ID= ENSG00000196922.10 TPM= 5.43 Transcript Type= NA chr8 145052378 145056030 145052378 145056030 + ENST00000331434.6@C8orf33 ENST00000331434.6 protein_coding 145052378,145052586,145053062,145053297,145054018 145052497,145052897,145053146,145053443,145056030 Gene ID= ENSG00000182307.12 TPM= 190.16 Transcript Type= protein_coding chr8 145052467 145056030 145052467 145056030 + ENST00000530455.5@C8orf33 ENST00000530455.5 protein_coding 145052467,145053062,145053297,145054018 145052897,145053146,145053443,145056030 Gene ID= ENSG00000182307.12 TPM= 97.8 Transcript Type= retained_intron chr9 14520 25007 14520 25007 - transcript1.chr9.nnic@WASHC1 transcript1.chr9.nnic protein_coding 24851,18381,18028,17719,17344,16965,16718,15909,15081,14520 25007,18479,18174,17855,17479,17166,16876,16061,15149,14940 Gene ID= ENSG00000181404.15 TPM= 24.45 Transcript Type= NA chr9 121043 179031 121043 179031 - transcript6.chr9.nic@CBWD1 transcript6.chr9.nic protein_coding 178816,175698,173270,172081,163978,162432,156481,154709,152034,151305,146102,134979,123386,123217,121961,121043 179031,175784,173366,172172,164037,162469,156527,154795,152078,151427,146158,135030,123454,123282,122090,121573 Gene ID= ENSG00000172785.18 TPM= 2.72 Transcript Type= NA chr9 121060 179047 121060 179047 - ENST00000314367.14@CBWD1 ENST00000314367.14 protein_coding 178816,177723,175698,173270,172081,163978,162432,156481,154709,152034,146102,134979,123386,123217,121961,121060 179047,177820,175784,173366,172172,164037,162469,156527,154795,152078,146158,135030,123454,123282,122090,121573 Gene ID= ENSG00000172785.18 TPM= 8.15 Transcript Type= protein_coding chr9 121409 179021 121409 179021 - ENST00000382447.8@CBWD1 ENST00000382447.8 protein_coding 178816,175698,173270,172081,163978,162432,156481,154709,152034,134979,123386,123217,121961,121409 179021,175784,173366,172172,164037,162469,156527,154795,152078,135030,123454,123282,122090,121573 Gene ID= ENSG00000172785.18 TPM= 1.81 Transcript Type= protein_coding chr9 211182 465267 211182 465267 + transcript17.chr9.nnic@DOCK8 transcript17.chr9.nnic protein_coding 211182,271627,286461,289510,304581,311954,317043,325671,328022,332398,334225,336582,339006,340159,368018,370230,371428,372185,376210,376977,379771,382513,386331,390471,396785,399146,404918,406930,414782,418068,420401,420949,422048,426885,428362,429702,432166,433875,434783,439245,441286,441875,443427,446370,449784,452011,463517,464159 211316,271729,286636,289581,304704,312166,317128,325737,328171,332478,334384,336718,339099,340321,368135,370300,371566,372286,376305,377211,379935,382685,386426,390566,396934,399259,405073,407069,414951,418207,420583,421078,422135,426981,428496,429854,432324,433975,434975,439388,441417,442009,443516,446606,449927,452117,463687,465267 Gene ID= ENSG00000107099.15 TPM= 10.87 Transcript Type= NA chr9 215176 465267 215176 465267 + transcript18.chr9.nic@DOCK8 transcript18.chr9.nic protein_coding 215176,271627,286461,289510,304581,311954,317043,325671,328022,332398,334225,336582,339006,340159,368018,370230,371428,372185,376210,376977,379771,382513,386331,390471,396785,399146,404918,406930,414782,418068,420401,420949,422048,426885,428362,429702,432166,433875,434783,439245,441286,441875,443427,446370,449784,452011,463517,464159 215416,271729,286636,289581,304704,312166,317128,325737,328171,332478,334384,336718,339099,340321,368135,370300,371566,372286,376305,377211,379935,382685,386426,390566,396934,399259,405073,407069,414951,418207,420583,421078,422135,426981,428496,429854,432324,433975,434975,439388,441417,442009,443516,446606,449927,452117,463687,465267 Gene ID= ENSG00000107099.15 TPM= 7.24 Transcript Type= NA chr9 504686 746104 504686 746104 + transcript26.chr9.nnic@KANK1 transcript26.chr9.nnic protein_coding 504686,676890,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173 504754,677009,713464,730194,731266,732617,734835,738504,740934,742405,744589,746104 Gene ID= ENSG00000107104.18 TPM= 2.72 Transcript Type= NA chr9 540506 746104 540506 746104 + transcript29.chr9.nnic@KANK1 transcript29.chr9.nnic protein_coding 540506,676890,710804,730051,731158,734748,738285,740792,742205,744491,745173 540585,677009,713464,730248,731266,734835,738504,740934,742405,744589,746104 Gene ID= ENSG00000107104.18 TPM= 2.72 Transcript Type= NA chr9 504716 746105 504716 746105 + ENST00000382297.6@KANK1 ENST00000382297.6 protein_coding 504716,676890,710804,730051,731158,732378,734748,738285,740792,742205,744491,745173 504754,677009,713464,730248,731266,732617,734835,738504,740934,742405,744589,746105 Gene ID= ENSG00000107104.18 TPM= 6.34 Transcript Type= protein_coding chr9 2015186 2193620 2015186 2193620 + ENST00000357248.8@SMARCA2 ENST00000357248.8 protein_coding 2015186,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704 2015404,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193620 Gene ID= ENSG00000080503.22 TPM= 25.34 Transcript Type= protein_coding chr9 2015886 2193621 2015886 2193621 + transcript41.chr9.nic@SMARCA2 transcript41.chr9.nic protein_coding 2015886,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704 2016143,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193621 Gene ID= ENSG00000080503.22 TPM= 11.3 Transcript Type= NA chr9 2016909 2193621 2016909 2193621 + transcript43.chr9.nic@SMARCA2 transcript43.chr9.nic protein_coding 2016909,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704 2017207,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193621 Gene ID= ENSG00000080503.22 TPM= 11.3 Transcript Type= NA chr9 2017341 2193621 2017341 2193621 + transcript44.chr9.nic@SMARCA2 transcript44.chr9.nic protein_coding 2017341,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704 2017799,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193621 Gene ID= ENSG00000080503.22 TPM= 20.36 Transcript Type= NA chr9 2158440 2193621 2158440 2193621 + transcript53.chr9.nic@SMARCA2 transcript53.chr9.nic protein_coding 2158440,2159814,2161686,2181571,2182141,2186096,2191266,2192704 2158594,2159909,2161903,2181676,2182242,2186228,2191408,2193621 Gene ID= ENSG00000080503.22 TPM= 4.69 Transcript Type= NA chr9 2157507 2193621 2157507 2193621 + transcript60.chr9.nnic@SMARCA2 transcript60.chr9.nnic protein_coding 2157507,2161686,2181571,2182141,2186096,2191266,2192704 2158392,2161903,2181676,2182242,2186228,2191408,2193621 Gene ID= ENSG00000080503.22 TPM= 4.69 Transcript Type= NA chr9 2015281 2046037 2015281 2046037 + ENST00000637103.1@SMARCA2 ENST00000637103.1 protein_coding 2015281,2028987,2032952,2039466,2041331 2015404,2029247,2033081,2039900,2046037 Gene ID= ENSG00000080503.22 TPM= 1.81 Transcript Type= protein_coding chr9 2017412 2193577 2017412 2193577 + ENST00000382194.6@SMARCA2 ENST00000382194.6 protein_coding 2017412,2028987,2032952,2039466,2047229,2054597,2056672,2058291,2060816,2070418,2073212,2073566,2076229,2077629,2081832,2083347,2084086,2086829,2088500,2096657,2097385,2101570,2104003,2110254,2115822,2119458,2123719,2161686,2181571,2182141,2186096,2191266,2192704 2017497,2029247,2033081,2039900,2047484,2054723,2056845,2058464,2060986,2070471,2073342,2073623,2076329,2077776,2081995,2083413,2084196,2087071,2088613,2096764,2097471,2101616,2104169,2110417,2116049,2119535,2123937,2161903,2181676,2182242,2186228,2191408,2193577 Gene ID= ENSG00000080503.22 TPM= 10.12 Transcript Type= protein_coding chr9 2157683 2193574 2157683 2193574 + ENST00000324954.10@SMARCA2 ENST00000324954.10 protein_coding 2157683,2161686,2181571,2182141,2186096,2191266,2192704 2157890,2161903,2181676,2182242,2186228,2191408,2193574 Gene ID= ENSG00000080503.22 TPM= 2.88 Transcript Type= protein_coding chr9 2158453 2193571 2158453 2193571 + ENST00000635590.1@SMARCA2 ENST00000635590.1 protein_coding 2158453,2159814,2161001,2161686,2181571,2182141,2186096,2191266,2192704 2158594,2159909,2161035,2161903,2181676,2182242,2186228,2191408,2193571 Gene ID= ENSG00000080503.22 TPM= 2.88 Transcript Type= nonsense_mediated_decay chr9 2622101 2656110 2622101 2656110 + transcript72.chr9.nic@VLDLR transcript72.chr9.nic protein_coding 2622101,2635453,2639859,2643160,2643628,2643837,2644734,2644957,2645574,2646334,2647474,2648208,2648669,2650370,2651874,2652780,2653833 2622271,2635572,2639981,2643531,2643750,2643959,2644853,2645082,2645745,2646552,2647592,2648347,2648810,2650516,2651954,2652949,2656110 Gene ID= ENSG00000147852.15 TPM= 5.43 Transcript Type= NA chr9 2622100 2654480 2622100 2654480 + ENST00000382099.2@VLDLR ENST00000382099.2 protein_coding 2622100,2635453,2639859,2641377,2643160,2643628,2643837,2644734,2644957,2645574,2646334,2647474,2648208,2648669,2650370,2651874,2652780,2653833 2622271,2635572,2639981,2641499,2643531,2643750,2643959,2644853,2645082,2645745,2646552,2647592,2648347,2648810,2650516,2651954,2652949,2654480 Gene ID= ENSG00000147852.15 TPM= 12.68 Transcript Type= protein_coding chr9 3526466 3590533 3526466 3590533 + transcript76.chr9.nnic@RFX3-AS1 transcript76.chr9.nnic lincRNA 3526466,3546778,3568794,3589014 3526777,3546912,3568889,3590533 Gene ID= ENSG00000232104.3 TPM= 1.81 Transcript Type= NA chr9 4490444 4587469 4490444 4587469 + ENST00000262352.7@SLC1A1 ENST00000262352.7 protein_coding 4490444,4544567,4561449,4564344,4566047,4567669,4572204,4573907,4576001,4576569,4583038,4585312 4490770,4544707,4561541,4564458,4566089,4567767,4572388,4574014,4576123,4576763,4583172,4587469 Gene ID= ENSG00000106688.11 TPM= 1.81 Transcript Type= protein_coding chr9 4676600 4679471 4676600 4679471 - ENST00000609131.1@CDC37L1-AS1 ENST00000609131.1 lincRNA 4679387,4676600 4679471,4676749 Gene ID= ENSG00000273061.1 TPM= 5.43 Transcript Type= lincRNA chr9 4679566 4708398 4679566 4708398 + ENST00000381854.3@CDC37L1 ENST00000381854.3 protein_coding 4679566,4684877,4688513,4697096,4697757,4701864,4706011 4679899,4685158,4688606,4697211,4697879,4702028,4708398 Gene ID= ENSG00000106993.11 TPM= 28.07 Transcript Type= protein_coding chr9 4711155 4741318 4711155 4741318 - ENST00000381809.7@AK3 ENST00000381809.7 protein_coding 4740937,4722506,4719135,4718419,4711155 4741318,4722625,4719307,4718537,4713096 Gene ID= ENSG00000147853.16 TPM= 196.96 Transcript Type= protein_coding chr9 4792869 4861064 4792869 4861064 + ENST00000381750.8@RCL1 ENST00000381750.8 protein_coding 4792869,4823548,4826858,4833154,4834141,4841232,4844525,4849447,4860125 4793227,4823619,4827033,4833228,4834265,4841357,4844681,4849550,4861064 Gene ID= ENSG00000120158.11 TPM= 30.79 Transcript Type= protein_coding chr9 5357973 5437878 5357973 5437878 - ENST00000223864.6@PLGRKT ENST00000223864.6 protein_coding 5437789,5436569,5431897,5361758,5361078,5357973 5437878,5436694,5431983,5361888,5361187,5358360 Gene ID= ENSG00000107020.9 TPM= 16.3 Transcript Type= protein_coding chr9 5784572 5833128 5784572 5833128 - transcript128.chr9.nnic@ERMP1 transcript128.chr9.nnic protein_coding 5832690,5830727,5825092,5823896,5812889,5812125,5811111,5810011,5801176,5798806,5797817,5787430,5784572 5833128,5831028,5825219,5824001,5813035,5812217,5811323,5810231,5801328,5799008,5797932,5787593,5787308 Gene ID= ENSG00000099219.13 TPM= 2.26 Transcript Type= NA chr9 5784573 5833117 5784573 5833117 - ENST00000339450.9@ERMP1 ENST00000339450.9 protein_coding 5832690,5830727,5825092,5823896,5812889,5812125,5811111,5810011,5805611,5805027,5801176,5798806,5797817,5787430,5784573 5833117,5831028,5825219,5824001,5813035,5812217,5811323,5810231,5805785,5805217,5801328,5799008,5797932,5787593,5787308 Gene ID= ENSG00000099219.13 TPM= 32.15 Transcript Type= protein_coding chr9 5968186 6008257 5968186 6008257 - transcript129.chr9.nic@KIAA2026 transcript129.chr9.nic protein_coding 6007195,5988345,5968186 6008257,5988545,5969436 Gene ID= ENSG00000183354.11 TPM= 3.62 Transcript Type= NA chr9 6215781 6257983 6215781 6257983 + transcript131.chr9.nic@IL33 transcript131.chr9.nic protein_coding 6215781,6241684,6250474,6251140,6252866,6253552,6254462,6255968 6215852,6241785,6250599,6251265,6252991,6253602,6254553,6257983 Gene ID= ENSG00000137033.11 TPM= 13.58 Transcript Type= NA chr9 6413151 6507054 6413151 6507054 + ENST00000468435.6@UHRF2 ENST00000468435.6 protein_coding 6413151,6420912,6433914,6460573,6475391,6477622,6481643,6481992,6486821,6492303,6493826,6497198,6498018,6499835,6500552,6504593,6506033 6413643,6421142,6434173,6460791,6475500,6477808,6481766,6482099,6486925,6492401,6493932,6497360,6498158,6499931,6500709,6504691,6507054 Gene ID= ENSG00000147854.16 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr9 6757656 7175648 6757656 7175648 + ENST00000381309.7@KDM4C ENST00000381309.7 protein_coding 6757656,6792972,6805599,6814631,6849507,6880012,6887960,6893095,6980925,6984166,6986344,6990416,7011698,7013788,7015853,7046862,7049092,7103685,7128066,7165238,7169798,7174553 6758203,6793132,6805774,6814745,6849700,6880061,6888063,6893232,6981118,6984404,6986666,6990524,7011879,7014001,7015929,7046917,7049200,7103870,7128236,7165357,7169890,7175648 Gene ID= ENSG00000107077.18 TPM= 7.24 Transcript Type= protein_coding chr9 7796490 7800067 7796490 7800067 - ENST00000358227.4@DMAC1 ENST00000358227.4 protein_coding 7799461,7796490 7800067,7798637 Gene ID= ENSG00000137038.7 TPM= 115 Transcript Type= protein_coding chr9 12775021 12822131 12775021 12822131 + ENST00000319264.3@LURAP1L ENST00000319264.3 protein_coding 12775021,12821386 12776027,12822131 Gene ID= ENSG00000153714.5 TPM= 8.15 Transcript Type= protein_coding chr9 14087569 14313667 14087569 14313667 - ENST00000380953.5@NFIB ENST00000380953.5 protein_coding 14313482,14306989,14179727,14155825,14150145,14146689,14125632,14120440,14116208,14112999,14087569 14313667,14307520,14179780,14155893,14150265,14146807,14125766,14120624,14116346,14113081,14088326 Gene ID= ENSG00000147862.15 TPM= 1.81 Transcript Type= protein_coding chr9 14734666 14910995 14734666 14910995 - ENST00000422223.6@FREM1 ENST00000422223.6 protein_coding 14910770,14909914,14868744,14863809,14859183,14857553,14851284,14848665,14845960,14842316,14841447,14824796,14824025,14823160,14819234,14816778,14812812,14807940,14806661,14804956,14801652,14797498,14792743,14788919,14784370,14775789,14770605,14769724,14759772,14756374,14750127,14748401,14747681,14747264,14746923,14746353,14740149,14734666 14910995,14910236,14869244,14863903,14859484,14857749,14851607,14848773,14846091,14842660,14841589,14824992,14824115,14823327,14819442,14816871,14813064,14808134,14806846,14805152,14801874,14797642,14792884,14789114,14784634,14776203,14770806,14769868,14759901,14756446,14750276,14748639,14747728,14747428,14747051,14746468,14740234,14737595 Gene ID= ENSG00000164946.19 TPM= 3.62 Transcript Type= protein_coding chr9 15163622 15307360 15163622 15307360 - ENST00000512701.6@TTC39B ENST00000512701.6 protein_coding 15307084,15267914,15225917,15214139,15211266,15210088,15203823,15199861,15192590,15191190,15190554,15189725,15189574,15187971,15186944,15185280,15182307,15177697,15175019,15163622 15307360,15267948,15226012,15214249,15211397,15210164,15203890,15199925,15192695,15191255,15190662,15189792,15189633,15188132,15187035,15185406,15182415,15177814,15175135,15172109 Gene ID= ENSG00000155158.20 TPM= 4.53 Transcript Type= protein_coding chr9 15422873 15461626 15422873 15461626 + transcript187.chr9.nnic@SNAPC3 transcript187.chr9.nnic protein_coding 15422873,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15460436 15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15461626 Gene ID= ENSG00000164975.15 TPM= 5.43 Transcript Type= NA chr9 15422704 15464134 15422704 15464134 + ENST00000380821.7@SNAPC3 ENST00000380821.7 protein_coding 15422704,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719 15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15464134 Gene ID= ENSG00000164975.15 TPM= 43.47 Transcript Type= protein_coding chr9 15422869 15462460 15422869 15462460 + ENST00000490969.5@SNAPC3 ENST00000490969.5 protein_coding 15422869,15423909,15433552,15444602,15447095,15451320,15453041,15457960,15459719,15461631 15423193,15423986,15433636,15444706,15447244,15451402,15453205,15458067,15460313,15462460 Gene ID= ENSG00000164975.15 TPM= 22.64 Transcript Type= nonsense_mediated_decay chr9 15470646 15510979 15470646 15510979 - transcript186.chr9.nnic@PSIP1 transcript186.chr9.nnic protein_coding 15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15470646 15510979,15510329,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15472548 Gene ID= ENSG00000164985.14 TPM= 2.72 Transcript Type= NA chr9 15464066 15511019 15464066 15511019 - ENST00000380733.8@PSIP1 ENST00000380733.8 protein_coding 15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066 15511019,15510329,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580 Gene ID= ENSG00000164985.14 TPM= 23.54 Transcript Type= protein_coding chr9 15464066 15510995 15464066 15510995 - ENST00000380738.8@PSIP1 ENST00000380738.8 protein_coding 15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15469938,15469266,15468957,15468630,15466748,15464066 15510995,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15469993,15469336,15469058,15468843,15466859,15465580 Gene ID= ENSG00000164985.14 TPM= 21.28 Transcript Type= protein_coding chr9 15470636 15510994 15470636 15510994 - ENST00000380716.8@PSIP1 ENST00000380716.8 protein_coding 15510817,15510117,15506561,15489986,15486827,15486006,15479591,15478477,15474009,15472632,15470636 15510994,15510326,15506637,15490124,15486931,15486068,15479687,15478552,15474237,15472750,15471231 Gene ID= ENSG00000164985.14 TPM= 1.36 Transcript Type= protein_coding chr9 17134982 17168556 17134982 17168556 + ENST00000484374.1@CNTLN ENST00000484374.1 protein_coding 17134982,17143288,17166818 17135425,17143376,17168556 Gene ID= ENSG00000044459.14 TPM= 1.81 Transcript Type= processed_transcript chr9 18474233 18723917 18474233 18723917 + ENST00000276935.6@ADAMTSL1 ENST00000276935.6 protein_coding 18474233,18504829,18533247,18574030,18622243,18635943,18639254,18657639,18661935,18675857,18680312,18681812,18684716,18706747,18721536,18723018 18474295,18504956,18533292,18574266,18622369,18636017,18639411,18657750,18662073,18675907,18680516,18681959,18684800,18707048,18721665,18723917 Gene ID= ENSG00000178031.16 TPM= 1.81 Transcript Type= protein_coding chr9 19053143 19103119 19053143 19103119 - ENST00000380502.7@HAUS6 ENST00000380502.7 protein_coding 19102524,19096674,19094317,19093171,19089412,19087091,19086734,19082873,19080479,19078176,19076602,19070219,19063514,19063008,19060088,19057961,19053143 19103119,19096769,19094395,19093303,19089559,19087156,19086782,19083043,19080672,19078302,19076704,19070300,19063580,19063193,19060223,19059001,19056404 Gene ID= ENSG00000147874.10 TPM= 18.11 Transcript Type= protein_coding chr9 19115770 19127576 19115770 19127576 - ENST00000276914.6@PLIN2 ENST00000276914.6 protein_coding 19127419,19126397,19126114,19123565,19120880,19119650,19118321,19115770 19127576,19126448,19126309,19123647,19121165,19119831,19118455,19116649 Gene ID= ENSG00000147872.9 TPM= 286.15 Transcript Type= protein_coding chr9 19123235 19127476 19123235 19127476 - ENST00000380465.7@PLIN2 ENST00000380465.7 protein_coding 19127419,19126397,19126114,19123565,19123235 19127476,19126448,19126309,19123647,19123476 Gene ID= ENSG00000147872.9 TPM= 2.72 Transcript Type= protein_coding chr9 19230435 19372858 19230435 19372858 + ENST00000602925.5@DENND4C ENST00000602925.5 protein_coding 19230435,19276158,19286769,19288596,19290704,19296008,19298056,19299229,19300187,19305352,19316417,19316621,19324362,19325939,19326064,19328030,19331978,19334977,19336270,19340992,19342633,19345921,19350702,19352073,19352490,19356972,19357965,19360244,19361846,19369837,19371756,19372037 19230833,19276479,19287021,19288665,19290876,19296246,19298122,19299287,19300331,19305527,19316517,19316839,19324507,19325974,19326194,19328162,19332184,19335105,19336414,19341114,19342779,19347086,19350879,19352182,19352665,19357154,19358160,19360489,19361963,19369987,19371820,19372858 Gene ID= ENSG00000137145.20 TPM= 7.24 Transcript Type= protein_coding chr9 19376285 19380198 19376285 19380198 - ENST00000315377.4@RPS6 ENST00000315377.4 protein_coding 19380088,19379487,19378708,19378368,19376494,19376285 19380198,19379618,19378918,19378514,19376651,19376388 Gene ID= ENSG00000137154.12 TPM= 3.92 Transcript Type= protein_coding chr9 20341665 20622543 20341665 20622543 - ENST00000380338.8@MLLT3 ENST00000380338.8 protein_coding 20622245,20620654,20456704,20448123,20413721,20365669,20363476,20360742,20354808,20353525,20341665 20622543,20620834,20456786,20448266,20414425,20365744,20363605,20360841,20354879,20353596,20346574 Gene ID= ENSG00000171843.15 TPM= 12.68 Transcript Type= protein_coding chr9 20658298 20995954 20658298 20995954 + transcript244.chr9.nnic@FOCAD transcript244.chr9.nnic protein_coding 20658298,20715322,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556 20658826,20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995954 Gene ID= ENSG00000188352.12 TPM= 14.42 Transcript Type= NA chr9 20684252 20995954 20684252 20995954 + transcript246.chr9.nic@FOCAD transcript246.chr9.nic protein_coding 20684252,20715322,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556 20684293,20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995954 Gene ID= ENSG00000188352.12 TPM= 6.27 Transcript Type= NA chr9 20715320 20995954 20715320 20995954 + transcript248.chr9.nnic@FOCAD transcript248.chr9.nnic protein_coding 20715320,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556 20715376,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995954 Gene ID= ENSG00000188352.12 TPM= 4.46 Transcript Type= NA chr9 20952412 20995954 20952412 20995954 + transcript252.chr9.nic@FOCAD transcript252.chr9.nic protein_coding 20952412,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556 20952515,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995954 Gene ID= ENSG00000188352.12 TPM= 1.97 Transcript Type= NA chr9 20981174 20995954 20981174 20995954 + transcript257.chr9.nic@FOCAD transcript257.chr9.nic protein_coding 20981174,20982357,20986288,20988332,20990123,20993253,20995556 20981686,20982446,20986465,20988429,20990374,20993328,20995954 Gene ID= ENSG00000188352.12 TPM= 4.68 Transcript Type= NA chr9 20715321 20995955 20715321 20995955 + ENST00000338382.10@FOCAD ENST00000338382.10 protein_coding 20715321,20717794,20720380,20740236,20758090,20764869,20770032,20778681,20781727,20789351,20819796,20820324,20820941,20822989,20862578,20865926,20866929,20874681,20881871,20885109,20907150,20912866,20916893,20923660,20926301,20929358,20933014,20944627,20946701,20948271,20948851,20949604,20950996,20952985,20976420,20978339,20981426,20982357,20986288,20988332,20990123,20993253,20995556 20715410,20717868,20720534,20740340,20758191,20765073,20770238,20778768,20781929,20789608,20819900,20820425,20821071,20823115,20862712,20865976,20867012,20874807,20882056,20885230,20907242,20912954,20916937,20923768,20926417,20929596,20933103,20944774,20946820,20948393,20948928,20949675,20951098,20953065,20976548,20978454,20981686,20982446,20986465,20988429,20990374,20993328,20995955 Gene ID= ENSG00000188352.12 TPM= 9.89 Transcript Type= protein_coding chr9 20993514 21031665 20993514 21031665 - transcript258.chr9.nnic@HACD4 transcript258.chr9.nnic protein_coding 21031553,21029295,21026596,21015898,21011589,21008021,20993514 21031665,21029398,21026723,21016010,21011695,21008146,20995922 Gene ID= ENSG00000188921.13 TPM= 1.81 Transcript Type= NA chr9 21003587 21031639 21003587 21031639 - transcript259.chr9.nnic@HACD4 transcript259.chr9.nnic protein_coding 21031400,21029295,21026596,21015898,21011589,21008021,21003587 21031639,21029398,21026723,21016010,21011695,21008146,21007119 Gene ID= ENSG00000188921.13 TPM= 10.87 Transcript Type= NA chr9 21324055 21335385 21324055 21335385 - transcript261.chr9.nnic@KLHL9 transcript261.chr9.nnic protein_coding 21332906,21330794,21329331,21324055 21335385,21330913,21329415,21324321 Gene ID= ENSG00000198642.6 TPM= 2.72 Transcript Type= NA chr9 21802543 21867078 21802543 21867078 + ENST00000380172.8@MTAP ENST00000380172.8 protein_coding 21802543,21815433,21816714,21818035,21837908,21854631,21859303,21861976 21802781,21815519,21816772,21818202,21838010,21854870,21859425,21867078 Gene ID= ENSG00000099810.18 TPM= 12.68 Transcript Type= protein_coding chr9 21967753 21994624 21967753 21994624 - ENST00000579755.1@CDKN2A ENST00000579755.1 protein_coding 21994139,21970902,21967753 21994624,21971208,21968242 Gene ID= ENSG00000147889.17 TPM= 12.22 Transcript Type= protein_coding chr9 21967753 21975098 21967753 21975098 - ENST00000304494.9@CDKN2A ENST00000304494.9 protein_coding 21974678,21970902,21967753 21975098,21971208,21968242 Gene ID= ENSG00000147889.17 TPM= 15.85 Transcript Type= protein_coding chr9 22002903 22009363 22002903 22009363 - ENST00000276925.6@CDKN2B ENST00000276925.6 protein_coding 22008798,22002903 22009363,22006247 Gene ID= ENSG00000147883.10 TPM= 2.72 Transcript Type= protein_coding chr9 26840948 26892819 26840948 26892819 - transcript273.chr9.nnic@CAAP1 transcript273.chr9.nnic protein_coding 26892413,26887313,26886104,26884810,26869926,26861066,26840948 26892819,26887513,26886188,26884885,26869977,26861139,26842647 Gene ID= ENSG00000120159.11 TPM= 2.72 Transcript Type= NA chr9 26840685 26892804 26840685 26892804 - ENST00000333916.7@CAAP1 ENST00000333916.7 protein_coding 26892413,26887313,26886104,26884810,26861066,26840685 26892804,26887513,26886188,26884885,26861139,26842647 Gene ID= ENSG00000120159.11 TPM= 58.86 Transcript Type= protein_coding chr9 26905343 26947261 26905343 26947261 - transcript281.chr9.nnic@PLAA transcript281.chr9.nnic protein_coding 26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26919310,26917097,26913879,26910338,26907834,26905343 26947261,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529,26917248,26913947,26910439,26907998,26906076 Gene ID= ENSG00000137055.14 TPM= 3.62 Transcript Type= NA chr9 26907803 26947233 26907803 26947233 - ENST00000520884.5@PLAA ENST00000520884.5 protein_coding 26946897,26935013,26928308,26928100,26926393,26925825,26923178,26920227,26919310,26917097,26913879,26910338,26907803 26947233,26935206,26928408,26928220,26926560,26925960,26923347,26920384,26919529,26917165,26913947,26910439,26907998 Gene ID= ENSG00000137055.14 TPM= 7.24 Transcript Type= protein_coding chr9 26956440 27062925 26956440 27062925 + transcript288.chr9.nnic@IFT74 transcript288.chr9.nnic protein_coding 26956440,26961949,26978128,26980571,26984257,26984499,26987071,26988669,26990134,27009020,27011906,27016907,27018647,27029025,27044742,27047274,27048148,27055609,27056334,27060591,27062618 26956516,26962087,26978263,26980619,26984355,26984559,26987218,26988728,26990195,27009158,27011968,27017050,27018687,27029104,27044795,27047371,27048274,27055772,27056459,27060651,27062925 Gene ID= ENSG00000096872.15 TPM= 1.81 Transcript Type= NA chr9 26956373 27062930 26956373 27062930 + ENST00000380062.9@IFT74 ENST00000380062.9 protein_coding 26956373,26961949,26978128,26980571,26984257,26984499,26988669,26990134,27009020,27011906,27016907,27018647,27029025,27044742,27047274,27048148,27055609,27056334,27060591,27062618 26956516,26962087,26978263,26980619,26984355,26984559,26988728,26990195,27009158,27011968,27017050,27018687,27029104,27044795,27047371,27048274,27055772,27056459,27060651,27062930 Gene ID= ENSG00000096872.15 TPM= 12.68 Transcript Type= protein_coding chr9 27109243 27232092 27109243 27232092 + transcript292.chr9.nic@TEK transcript292.chr9.nic protein_coding 27109243,27157831,27168495,27169477,27172616,27173222,27180240,27183459,27185485,27190529,27192489,27197315,27202820,27204911,27206582,27209121,27212707,27213484,27217688,27218777,27220049,27228206,27229158 27109642,27158142,27168605,27169629,27172747,27173362,27180368,27183610,27185629,27190690,27192623,27197599,27203119,27205062,27206792,27209231,27212897,27213597,27217758,27218817,27220145,27228305,27232092 Gene ID= ENSG00000120156.20 TPM= 19.47 Transcript Type= NA chr9 27109427 27232092 27109427 27232092 + transcript294.chr9.nic@TEK transcript294.chr9.nic protein_coding 27109427,27157831,27168495,27169477,27172616,27173222,27183459,27185485,27190529,27192489,27197315,27202820,27204911,27206582,27209121,27212707,27213484,27217688,27218777,27220049,27228206,27229158 27109642,27158142,27168605,27169629,27172747,27173362,27183610,27185629,27190690,27192623,27197599,27203119,27205062,27206792,27209231,27212897,27213597,27217758,27218817,27220145,27228305,27232092 Gene ID= ENSG00000120156.20 TPM= 3.17 Transcript Type= NA chr9 27546545 27573866 27546545 27573866 - ENST00000619707.4@C9orf72 ENST00000619707.4 protein_coding 27573709,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546545 27573866,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422 Gene ID= ENSG00000147894.14 TPM= 4.07 Transcript Type= protein_coding chr9 27559958 27573512 27559958 27573512 - transcript305.chr9.nic@C9orf72 transcript305.chr9.nic protein_coding 27573431,27566677,27565531,27562381,27559958 27573512,27567164,27565590,27562476,27561649 Gene ID= ENSG00000147894.14 TPM= 4.53 Transcript Type= NA chr9 27546546 27573450 27546546 27573450 - ENST00000380003.7@C9orf72 ENST00000380003.7 protein_coding 27573431,27566677,27565531,27562381,27561585,27560227,27558491,27556561,27550650,27548557,27546546 27573450,27567164,27565590,27562476,27561649,27560299,27558607,27556796,27550707,27548666,27548422 Gene ID= ENSG00000147894.14 TPM= 8.6 Transcript Type= protein_coding chr9 32384620 32450836 32384620 32450836 + ENST00000379923.5@ACO1 ENST00000379923.5 protein_coding 32384620,32386371,32405485,32407261,32408514,32418128,32418328,32419038,32420856,32423319,32424549,32425838,32427301,32429419,32430418,32431719,32433728,32434559,32436250,32440465,32448896,32449998 32384735,32386438,32405603,32407429,32408651,32418197,32418511,32419177,32421027,32423419,32424665,32425997,32427436,32429503,32430574,32431843,32433832,32434701,32436397,32440587,32449081,32450836 Gene ID= ENSG00000122729.18 TPM= 28.07 Transcript Type= protein_coding chr9 32455308 32552625 32455308 32552625 - transcript318.chr9.nnic@DDX58 transcript318.chr9.nnic protein_coding 32552434,32550774,32500805,32493761,32492391,32491301,32489344,32488734,32487945,32487471,32485175,32481340,32480219,32476983,32472975,32467762,32466290,32459371,32455308 32552625,32550968,32500939,32493942,32492538,32491420,32489451,32488887,32488203,32487633,32485279,32481497,32480354,32477131,32473065,32467932,32466441,32459514,32457418 Gene ID= ENSG00000107201.9 TPM= 5.89 Transcript Type= NA chr9 32455705 32526324 32455705 32526324 - ENST00000379883.2@DDX58 ENST00000379883.2 protein_coding 32526061,32500805,32493761,32492391,32491301,32489344,32488734,32487945,32487471,32485175,32481340,32480219,32476983,32472975,32467762,32466290,32459371,32455705 32526324,32500939,32493942,32492538,32491420,32489451,32488887,32488203,32487633,32485279,32481497,32480354,32477131,32473065,32467932,32466441,32459514,32457418 Gene ID= ENSG00000107201.9 TPM= 5.89 Transcript Type= protein_coding chr9 32540544 32552553 32540544 32552553 - ENST00000360538.6@TOPORS ENST00000360538.6 protein_coding 32552434,32550774,32540544 32552553,32550968,32544326 Gene ID= ENSG00000197579.7 TPM= 25.36 Transcript Type= protein_coding chr9 32552999 32573162 32552999 32573162 - ENST00000379847.7@NDUFB6 ENST00000379847.7 protein_coding 32572881,32570960,32558910,32552999 32573162,32571052,32558954,32553944 Gene ID= ENSG00000165264.10 TPM= 102.33 Transcript Type= protein_coding chr9 32972622 33001630 32972622 33001630 - transcript336.chr9.nic@APTX transcript336.chr9.nic protein_coding 33001567,32989759,32988083,32987544,32985971,32984631,32974458,32972622 33001630,32989895,32988124,32987731,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 1.81 Transcript Type= NA chr9 32972622 33025154 32972622 33025154 - transcript339.chr9.nic@APTX transcript339.chr9.nic protein_coding 33024804,32989759,32988083,32987544,32985971,32984631,32974458,32972622 33025154,32989895,32988129,32987731,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 5.43 Transcript Type= NA chr9 32972622 33025108 32972622 33025108 - transcript340.chr9.nic@APTX transcript340.chr9.nic protein_coding 33025000,32989759,32988083,32987544,32985971,32984631,32974458,32972622 33025108,32989895,32988129,32987731,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 1.81 Transcript Type= NA chr9 32971425 33001615 32971425 33001615 - transcript341.chr9.nnic@APTX transcript341.chr9.nnic protein_coding 33001567,32997243,32989759,32987544,32985971,32984631,32974458,32971425 33001615,32997348,32989895,32987731,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 1.81 Transcript Type= NA chr9 32972617 33001630 32972617 33001630 - transcript344.chr9.nic@APTX transcript344.chr9.nic protein_coding 33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972617 33001630,32989895,32988124,32987842,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 3.62 Transcript Type= NA chr9 32970872 33025154 32970872 33025154 - transcript345.chr9.nic@APTX transcript345.chr9.nic protein_coding 33024804,32989759,32988079,32987544,32985971,32984631,32974458,32970872 33025154,32989895,32988124,32987842,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 3.62 Transcript Type= NA chr9 32972611 33025160 32972611 33025160 - transcript346.chr9.nic@APTX transcript346.chr9.nic protein_coding 33025000,32989759,32988079,32987544,32985971,32984631,32974458,32972611 33025160,32989895,32988124,32987842,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 1.81 Transcript Type= NA chr9 32969026 33001593 32969026 33001593 - transcript347.chr9.nic@APTX transcript347.chr9.nic protein_coding 33001516,32989759,32988079,32987544,32985971,32984631,32974458,32969026 33001593,32989895,32988129,32987842,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 3.92 Transcript Type= NA chr9 32972622 33001630 32972622 33001630 - transcript357.chr9.nic@APTX transcript357.chr9.nic protein_coding 33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972622 33001630,32989895,32988129,32987842,32986030,32984857,32974561,32973688 Gene ID= ENSG00000137074.18 TPM= 1.81 Transcript Type= NA chr9 32972606 33001628 32972606 33001628 - ENST00000379825.6@APTX ENST00000379825.6 protein_coding 33001567,32989759,32988083,32987544,32985971,32984631,32974458,32972606 33001628,32989895,32988129,32987846,32986030,32984857,32974561,32973688 Gene ID= ENSG00000137074.18 TPM= 2.56 Transcript Type= protein_coding chr9 32972616 33001521 32972616 33001521 - ENST00000494649.5@APTX ENST00000494649.5 protein_coding 33001333,32989759,32988079,32987544,32985971,32984631,32974458,32972616 33001521,32989895,32988124,32987842,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 1.66 Transcript Type= nonsense_mediated_decay chr9 32972749 33001604 32972749 33001604 - ENST00000379819.5@APTX ENST00000379819.5 protein_coding 33001567,32989759,32988079,32987544,32985971,32984631,32974458,32972749 33001604,32989895,32988129,32987842,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 3.92 Transcript Type= protein_coding chr9 32973407 33025112 32973407 33025112 - ENST00000495360.5@APTX ENST00000495360.5 protein_coding 33024804,32989759,32988083,32987544,32985971,32984631,32974458,32973407 33025112,32989895,32988124,32987731,32986030,32984857,32974561,32973652 Gene ID= ENSG00000137074.18 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr9 33025211 33039907 33025211 33039907 + ENST00000330899.4@DNAJA1 ENST00000330899.4 protein_coding 33025211,33026475,33026813,33029885,33030440,33034216,33036574,33037015,33038685 33025383,33026616,33026990,33029989,33030667,33034330,33036689,33037115,33039907 Gene ID= ENSG00000086061.15 TPM= 308.79 Transcript Type= protein_coding chr9 33110637 33167356 33110637 33167356 - ENST00000379731.4@B4GALT1 ENST00000379731.4 protein_coding 33166758,33135189,33120419,33115991,33113774,33110637 33167356,33135424,33120606,33116113,33113878,33113586 Gene ID= ENSG00000086062.12 TPM= 18.11 Transcript Type= protein_coding chr9 33255025 33264694 33255025 33264694 - transcript375.chr9.nic@BAG1 transcript375.chr9.nic protein_coding 33264206,33262702,33261087,33258920,33256801,33255865,33255025 33264694,33262830,33261169,33259033,33256908,33255927,33255308 Gene ID= ENSG00000107262.19 TPM= 3.62 Transcript Type= NA chr9 33264942 33281539 33264942 33281539 + ENST00000223500.8@CHMP5 ENST00000223500.8 protein_coding 33264942,33266010,33267853,33270623,33271152,33276456,33278113,33280809 33265147,33266114,33267899,33270716,33271223,33276564,33278225,33281539 Gene ID= ENSG00000086065.13 TPM= 132.21 Transcript Type= protein_coding chr9 33290511 33371157 33290511 33371157 + ENST00000379540.7@NFX1 ENST00000379540.7 protein_coding 33290511,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33351560,33352646,33354086,33354851,33364010,33364708,33366629,33367515,33369906 33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33351790,33352719,33354187,33354892,33364108,33364774,33366774,33367619,33371157 Gene ID= ENSG00000086102.18 TPM= 11.77 Transcript Type= protein_coding chr9 33290545 33348723 33290545 33348723 + ENST00000318524.6@NFX1 ENST00000318524.6 protein_coding 33290545,33294420,33301263,33303191,33307194,33311106,33313654,33318731,33318910,33328581,33332472,33338510,33342746,33344069,33347038,33347663 33290597,33295427,33301421,33303268,33307299,33311177,33313793,33318830,33319127,33328678,33332502,33338589,33342854,33344188,33347117,33348723 Gene ID= ENSG00000086102.18 TPM= 13.58 Transcript Type= protein_coding chr9 33441154 33447611 33441154 33447611 - ENST00000297991.4@AQP3 ENST00000297991.4 protein_coding 33447423,33443766,33443321,33442852,33442301,33441154 33447611,33443892,33443458,33442970,33442518,33442211 Gene ID= ENSG00000165272.14 TPM= 9.06 Transcript Type= protein_coding chr9 33461452 33473930 33461452 33473930 - ENST00000297990.8@NOL6 ENST00000297990.8 protein_coding 33473789,33472206,33472004,33470012,33469499,33469207,33468958,33468752,33468508,33468321,33468030,33467691,33467394,33467114,33466912,33466569,33466308,33466071,33465734,33465207,33464879,33464037,33463831,33463247,33463033,33461452 33473930,33472412,33472120,33470191,33469667,33469341,33469121,33468872,33468566,33468422,33468145,33467868,33467516,33467262,33466987,33466709,33466425,33466225,33465897,33465359,33464976,33464161,33463920,33463441,33463134,33462813 Gene ID= ENSG00000165271.16 TPM= 19.92 Transcript Type= protein_coding chr9 33817134 33917988 33817134 33917988 + transcript397.chr9.nnic@UBE2R2 transcript397.chr9.nnic protein_coding 33817134,33886881,33900174,33917018 33817934,33886967,33900271,33917988 Gene ID= ENSG00000107341.4 TPM= 3.62 Transcript Type= NA chr9 33817134 33917988 33817134 33917988 + transcript398.chr9.nnic@UBE2R2 transcript398.chr9.nnic protein_coding 33817134,33900174,33911964,33917018 33817934,33900271,33912098,33917988 Gene ID= ENSG00000107341.4 TPM= 1.81 Transcript Type= NA chr9 33817567 33920404 33817567 33920404 + ENST00000263228.3@UBE2R2 ENST00000263228.3 protein_coding 33817567,33886881,33900174,33911964,33917018 33817934,33886967,33900271,33912098,33920404 Gene ID= ENSG00000107341.4 TPM= 28.98 Transcript Type= protein_coding chr9 33921693 34048949 33921693 34048949 - ENST00000360802.5@UBAP2 ENST00000360802.5 protein_coding 34048878,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693 34048949,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599 Gene ID= ENSG00000137073.21 TPM= 4.6 Transcript Type= protein_coding chr9 33921693 34048907 33921693 34048907 - transcript406.chr9.nic@UBAP2 transcript406.chr9.nic protein_coding 34048825,34017050,33998787,33996223,33988973,33986760,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693 34048907,34017189,33998864,33996333,33989126,33986837,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599 Gene ID= ENSG00000137073.21 TPM= 4.15 Transcript Type= NA chr9 33921693 33934364 33921693 33934364 - ENST00000379239.8@UBAP2 ENST00000379239.8 protein_coding 33934054,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693 33934364,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599 Gene ID= ENSG00000137073.21 TPM= 2.04 Transcript Type= protein_coding chr9 33921693 34048901 33921693 34048901 - ENST00000379238.5@UBAP2 ENST00000379238.5 protein_coding 34048825,34017050,33998787,33996223,33988973,33986760,33973183,33971651,33963726,33960826,33956079,33953285,33948374,33944365,33943420,33941649,33935839,33933490,33932562,33927797,33926989,33926617,33924206,33923795,33923379,33923186,33922966,33922687,33921693 34048901,34017189,33998864,33996333,33989126,33986837,33973237,33971754,33963791,33960878,33956146,33953474,33948587,33944639,33943589,33941862,33935878,33933628,33932628,33927992,33927080,33926664,33924284,33924000,33923478,33923293,33923033,33922878,33922599 Gene ID= ENSG00000137073.21 TPM= 11.84 Transcript Type= protein_coding chr9 34086387 34126773 34086387 34126773 - ENST00000361264.8@DCAF12 ENST00000361264.8 protein_coding 34126354,34125023,34107359,34106434,34098324,34096716,34093286,34089412,34086387 34126773,34125277,34107565,34106494,34098517,34096781,34093448,34089590,34088508 Gene ID= ENSG00000198876.12 TPM= 182.01 Transcript Type= protein_coding chr9 34179006 34252524 34179006 34252524 + transcript414.chr9.nnic@UBAP1 transcript414.chr9.nnic protein_coding 34179006,34220908,34234216,34235853,34241185,34249779,34250658,34251392 34179240,34220948,34234340,34236003,34242108,34249961,34250759,34252524 Gene ID= ENSG00000165006.13 TPM= 4.83 Transcript Type= NA chr9 34179013 34252524 34179013 34252524 + transcript416.chr9.nnic@UBAP1 transcript416.chr9.nnic protein_coding 34179013,34216674,34220908,34234216,34241185,34249779,34250658,34251392 34179240,34216789,34220948,34234340,34242108,34249961,34250759,34252524 Gene ID= ENSG00000165006.13 TPM= 11.17 Transcript Type= NA chr9 34179040 34252524 34179040 34252524 + transcript418.chr9.nnic@UBAP1 transcript418.chr9.nnic protein_coding 34179040,34199826,34220908,34234216,34241185,34249779,34250658,34251392 34179240,34199923,34220948,34234340,34242108,34249961,34250759,34252524 Gene ID= ENSG00000165006.13 TPM= 4.83 Transcript Type= NA chr9 34179013 34252523 34179013 34252523 + ENST00000297661.8@UBAP1 ENST00000297661.8 protein_coding 34179013,34220908,34234216,34241185,34249779,34250658,34251392 34179240,34220948,34234340,34242108,34249961,34250759,34252523 Gene ID= ENSG00000165006.13 TPM= 133.41 Transcript Type= protein_coding chr9 34329506 34343713 34329506 34343713 + ENST00000379158.6@NUDT2 ENST00000379158.6 protein_coding 34329506,34336229,34338713,34339024,34343124 34329599,34336341,34338847,34339166,34343713 Gene ID= ENSG00000164978.17 TPM= 6.34 Transcript Type= protein_coding chr9 34329506 34343711 34329506 34343711 + ENST00000346365.8@NUDT2 ENST00000346365.8 protein_coding 34329506,34338713,34339024,34343124 34329599,34338847,34339166,34343711 Gene ID= ENSG00000164978.17 TPM= 14.49 Transcript Type= protein_coding chr9 34366670 34376853 34366670 34376853 - ENST00000297625.7@KIAA1161 ENST00000297625.7 protein_coding 34376793,34366670 34376853,34373006 Gene ID= ENSG00000164976.8 TPM= 17.21 Transcript Type= protein_coding chr9 34398190 34458570 34398190 34458570 - ENST00000297620.8@FAM219A ENST00000297620.8 protein_coding 34458204,34405916,34402705,34402387,34401666,34398190 34458570,34405964,34402807,34402467,34401720,34401122 Gene ID= ENSG00000164970.14 TPM= 5.89 Transcript Type= protein_coding chr9 34398184 34458552 34398184 34458552 - ENST00000379080.5@FAM219A ENST00000379080.5 protein_coding 34458237,34405865,34402705,34402387,34401666,34398184 34458552,34405964,34402807,34402467,34401720,34401119 Gene ID= ENSG00000164970.14 TPM= 4.98 Transcript Type= protein_coding chr9 34610486 34612104 34610486 34612104 - ENST00000378959.8@RPP25L ENST00000378959.8 protein_coding 34612064,34610486 34612104,34611332 Gene ID= ENSG00000164967.9 TPM= 33.05 Transcript Type= protein_coding chr9 34610486 34612104 34610486 34612104 - ENST00000297613.4@RPP25L ENST00000297613.4 protein_coding 34611860,34610486 34612104,34611332 Gene ID= ENSG00000164967.9 TPM= 4.07 Transcript Type= protein_coding chr9 34613551 34620480 34613551 34620480 - ENST00000259632.11@DCTN3 ENST00000259632.11 protein_coding 34620369,34618676,34617885,34616030,34614710,34614042,34613551 34620480,34618760,34617971,34616113,34614768,34614101,34613871 Gene ID= ENSG00000137100.15 TPM= 59.77 Transcript Type= protein_coding chr9 34613551 34620474 34613551 34620474 - ENST00000341694.6@DCTN3 ENST00000341694.6 protein_coding 34620369,34618676,34617885,34616030,34614710,34614042,34613551 34620474,34618760,34617971,34616113,34614768,34614198,34613871 Gene ID= ENSG00000137100.15 TPM= 3.62 Transcript Type= protein_coding chr9 34634722 34637771 34634722 34637771 - ENST00000277010.8@SIGMAR1 ENST00000277010.8 protein_coding 34637547,34637220,34636997,34634722 34637771,34637420,34637089,34635858 Gene ID= ENSG00000147955.16 TPM= 109.57 Transcript Type= protein_coding chr9 34634722 34637744 34634722 34637744 - ENST00000353468.4@SIGMAR1 ENST00000353468.4 protein_coding 34637547,34637267,34636997,34634722 34637744,34637420,34637089,34635858 Gene ID= ENSG00000147955.16 TPM= 10.87 Transcript Type= nonsense_mediated_decay chr9 34652192 34661887 34652192 34661887 + ENST00000441545.6@IL11RA ENST00000441545.6 protein_coding 34652192,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482 34652233,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661887 Gene ID= ENSG00000137070.17 TPM= 5.89 Transcript Type= protein_coding chr9 34653935 34661892 34653935 34661892 + ENST00000318041.13@IL11RA ENST00000318041.13 protein_coding 34653935,34655218,34655605,34656739,34657035,34657303,34657421,34658520,34659759,34660274,34660504,34660854,34661482 34653999,34655317,34655665,34656908,34657149,34657335,34657587,34658683,34659900,34660393,34660600,34660936,34661892 Gene ID= ENSG00000137070.17 TPM= 1.36 Transcript Type= protein_coding chr9 34664163 34666049 34664163 34666049 - ENST00000421828.6@AL162231.1 ENST00000421828.6 protein_coding 34665613,34665314,34664163 34666049,34665373,34665190 Gene ID= ENSG00000187186.14 TPM= 2.26 Transcript Type= protein_coding chr9 34665032 34666028 34665032 34666028 - ENST00000544078.2@AL162231.1 ENST00000544078.2 protein_coding 34665978,34665613,34665314,34665032 34666028,34665680,34665373,34665190 Gene ID= ENSG00000187186.14 TPM= 3.17 Transcript Type= protein_coding chr9 34689567 34691277 34689567 34691277 - ENST00000311925.6@CCL19 ENST00000311925.6 protein_coding 34691091,34690210,34689930,34689567 34691277,34690342,34690023,34689839 Gene ID= ENSG00000172724.11 TPM= 1.81 Transcript Type= protein_coding chr9 34709005 34710124 34709005 34710124 - ENST00000259607.6@CCL21 ENST00000259607.6 protein_coding 34710000,34709777,34709500,34709005 34710124,34709897,34709682,34709427 Gene ID= ENSG00000137077.7 TPM= 5.43 Transcript Type= protein_coding chr9 34989694 34998431 34989694 34998431 + ENST00000312316.9@DNAJB5 ENST00000312316.9 protein_coding 34989694,34993200,34996265,34997026 34989831,34993444,34996866,34998431 Gene ID= ENSG00000137094.14 TPM= 1.81 Transcript Type= protein_coding chr9 35056064 35073249 35056064 35073249 - ENST00000358901.10@VCP ENST00000358901.10 protein_coding 35072337,35068251,35067891,35066675,35065251,35064154,35062978,35062217,35062003,35061577,35061015,35060801,35060313,35059493,35059064,35057376,35056064 35073249,35068362,35068063,35066817,35065381,35064285,35063080,35062350,35062138,35061689,35061179,35060923,35060525,35059801,35059219,35057530,35057222 Gene ID= ENSG00000165280.15 TPM= 1293.64 Transcript Type= protein_coding chr9 35073822 35079941 35073822 35079941 - transcript499.chr9.nic@FANCG transcript499.chr9.nic protein_coding 35079731,35079441,35079151,35078605,35078141,35077264,35076971,35076724,35076432,35075962,35075465,35075279,35074927,35074371,35073822 35079941,35079535,35079241,35078736,35078343,35077399,35077101,35076870,35076583,35076028,35075754,35075325,35075082,35074494,35074216 Gene ID= ENSG00000221829.9 TPM= 2.72 Transcript Type= NA chr9 35073838 35080016 35073838 35080016 - ENST00000378643.7@FANCG ENST00000378643.7 protein_coding 35079441,35079151,35078605,35078141,35077264,35076971,35076724,35076432,35075962,35075465,35075279,35074927,35074371,35073838 35080016,35079241,35078736,35078343,35077399,35077101,35076870,35076583,35076028,35075754,35075325,35075082,35074494,35074216 Gene ID= ENSG00000221829.9 TPM= 13.58 Transcript Type= protein_coding chr9 35088689 35096562 35088689 35096562 - transcript512.chr9.nic@PIGO transcript512.chr9.nic protein_coding 35095879,35095055,35094216,35093901,35093421,35093030,35091240,35090466,35090066,35089380,35088689 35096562,35095566,35094359,35094024,35093580,35093209,35092767,35090672,35090280,35089450,35089221 Gene ID= ENSG00000165282.13 TPM= 2.72 Transcript Type= NA chr9 35087216 35096636 35087216 35096636 - transcript514.chr9.nic@PIGO transcript514.chr9.nic protein_coding 35096561,35095055,35094216,35093901,35093421,35093030,35091240,35090466,35090066,35089380,35087216 35096636,35095566,35094359,35094024,35093580,35093209,35092767,35090672,35090280,35089450,35089221 Gene ID= ENSG00000165282.13 TPM= 31.69 Transcript Type= NA chr9 35088689 35096601 35088689 35096601 - ENST00000361778.6@PIGO ENST00000361778.6 protein_coding 35096561,35095055,35094216,35093901,35093421,35093030,35092543,35091240,35090466,35090066,35089380,35088689 35096601,35095566,35094359,35094024,35093580,35093209,35092767,35091291,35090672,35090280,35089450,35089221 Gene ID= ENSG00000165282.13 TPM= 44.37 Transcript Type= protein_coding chr9 35088691 35096548 35088691 35096548 - ENST00000378617.3@PIGO ENST00000378617.3 protein_coding 35096155,35095055,35094216,35093901,35093421,35093030,35091240,35090466,35090066,35089380,35088691 35096548,35095566,35094359,35094024,35093580,35093209,35092767,35090672,35090280,35089450,35089221 Gene ID= ENSG00000165282.13 TPM= 11.77 Transcript Type= protein_coding chr9 35099891 35103157 35099891 35103157 - ENST00000356493.9@STOML2 ENST00000356493.9 protein_coding 35103050,35102686,35102095,35101904,35101710,35101426,35101135,35100932,35100598,35099891 35103157,35102823,35102194,35101962,35101811,35101560,35101279,35101011,35100726,35100172 Gene ID= ENSG00000165283.15 TPM= 221.7 Transcript Type= protein_coding chr9 35104121 35111588 35104121 35111588 - ENST00000603301.5@FAM214B ENST00000603301.5 protein_coding 35111269,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121 35111588,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374 Gene ID= ENSG00000005238.19 TPM= 12.59 Transcript Type= protein_coding chr9 35104119 35111604 35104119 35111604 - transcript529.chr9.nnic@FAM214B transcript529.chr9.nnic protein_coding 35111567,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104119 35111604,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374 Gene ID= ENSG00000005238.19 TPM= 3.53 Transcript Type= NA chr9 35104119 35115911 35104119 35115911 - transcript530.chr9.nic@FAM214B transcript530.chr9.nic protein_coding 35115671,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104119 35115911,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374 Gene ID= ENSG00000005238.19 TPM= 13.49 Transcript Type= NA chr9 35104121 35115896 35104121 35115896 - ENST00000322813.9@FAM214B ENST00000322813.9 protein_coding 35115805,35108594,35107381,35106833,35106538,35106252,35105941,35105682,35104121 35115896,35108737,35108349,35106891,35106643,35106410,35106009,35105857,35105374 Gene ID= ENSG00000005238.19 TPM= 2.63 Transcript Type= protein_coding chr9 35104112 35115850 35104112 35115850 - ENST00000378566.5@FAM214B ENST00000378566.5 protein_coding 35115671,35108594,35108128,35107381,35106833,35106538,35106252,35105941,35105682,35104112 35115850,35108737,35108349,35107568,35106891,35106643,35106410,35106009,35105857,35105374 Gene ID= ENSG00000005238.19 TPM= 3.08 Transcript Type= protein_coding chr9 35162062 35405338 35162062 35405338 + ENST00000378495.7@UNC13B ENST00000378495.7 protein_coding 35162062,35228015,35231120,35236469,35237703,35243291,35258993,35295696,35310467,35313899,35366947,35370318,35375127,35376028,35377468,35378295,35380470,35381100,35381556,35382357,35384246,35385724,35386165,35389846,35390629,35396476,35396841,35397167,35397635,35398211,35398554,35398882,35399161,35399392,35399649,35400296,35403167,35403440,35403748 35162305,35228044,35231219,35236586,35237826,35243364,35259050,35295930,35310781,35313989,35366993,35370396,35375201,35376247,35377695,35378436,35380639,35381215,35381719,35382507,35384314,35385813,35386293,35389973,35390714,35396602,35396937,35397310,35397712,35398288,35398642,35399034,35399284,35399448,35399729,35400443,35403259,35403599,35405338 Gene ID= ENSG00000198722.14 TPM= 16.3 Transcript Type= protein_coding chr9 35489935 35561893 35489935 35561893 + transcript539.chr9.nnic@RUSC2 transcript539.chr9.nnic protein_coding 35489935,35555060,35555952,35556308,35557914,35558197,35558462,35559226,35560029,35560960,35561181 35490172,35555701,35556137,35556448,35557990,35558371,35558567,35559272,35560851,35561097,35561893 Gene ID= ENSG00000198853.11 TPM= 14.94 Transcript Type= NA chr9 35490127 35561892 35490127 35561892 + ENST00000361226.7@RUSC2 ENST00000361226.7 protein_coding 35490127,35546430,35555060,35555952,35556308,35557914,35558197,35558462,35559226,35560029,35560960,35561181 35490172,35548535,35555701,35556137,35556448,35557990,35558371,35558567,35559272,35560851,35561097,35561892 Gene ID= ENSG00000198853.11 TPM= 18.56 Transcript Type= protein_coding chr9 35605312 35610059 35605312 35610059 + transcript569.chr9.nic@TESK1 transcript569.chr9.nic protein_coding 35605312,35605984,35606237,35607928,35608160,35608395,35608862 35605838,35606105,35607672,35608011,35608249,35608509,35610059 Gene ID= ENSG00000107140.15 TPM= 6.34 Transcript Type= NA chr9 35605305 35610032 35605305 35610032 + ENST00000620767.4@TESK1 ENST00000620767.4 protein_coding 35605305,35605474,35605984,35606237,35606837,35607327,35607582,35607928,35608160,35608395,35608862 35605425,35605838,35606105,35606285,35606983,35607409,35607672,35608011,35608249,35608509,35610032 Gene ID= ENSG00000107140.15 TPM= 54.33 Transcript Type= protein_coding chr9 35658352 35661190 35658352 35661190 + transcript580.chr9.nnic@CCDC107 transcript580.chr9.nnic protein_coding 35658352,35658576,35660401,35660557,35660746,35660940 35658485,35660242,35660461,35660647,35660858,35661190 Gene ID= ENSG00000159884.11 TPM= 2.72 Transcript Type= NA chr9 35658356 35661192 35658356 35661192 + transcript583.chr9.nnic@CCDC107 transcript583.chr9.nnic protein_coding 35658356,35658576,35660401,35660557,35660771 35658485,35658727,35660461,35660647,35661192 Gene ID= ENSG00000159884.11 TPM= 5.28 Transcript Type= NA chr9 35658314 35661187 35658314 35661187 + ENST00000378406.5@CCDC107 ENST00000378406.5 protein_coding 35658314,35658576,35660401,35660557 35658485,35658727,35660461,35661187 Gene ID= ENSG00000159884.11 TPM= 8 Transcript Type= protein_coding chr9 35658304 35661186 35658304 35661186 + ENST00000378407.7@CCDC107 ENST00000378407.7 protein_coding 35658304,35658576,35660401,35660557,35660774 35658485,35658727,35660461,35660647,35661186 Gene ID= ENSG00000159884.11 TPM= 6.18 Transcript Type= protein_coding chr9 35658317 35661177 35658317 35661177 + ENST00000327351.6@CCDC107 ENST00000327351.6 protein_coding 35658317,35658576,35660401,35660557,35660766,35660940 35658485,35658727,35660461,35660647,35660858,35661177 Gene ID= ENSG00000159884.11 TPM= 4.07 Transcript Type= protein_coding chr9 35673856 35681159 35673856 35681159 + ENST00000378357.8@CA9 ENST00000378357.8 protein_coding 35673856,35675538,35675761,35676064,35676297,35677790,35679185,35679854,35680113,35680753,35680965 35674362,35675567,35675931,35676206,35676389,35677856,35679342,35679998,35680139,35680834,35681159 Gene ID= ENSG00000107159.12 TPM= 9.06 Transcript Type= protein_coding chr9 35681995 35691146 35681995 35691146 - transcript589.chr9.nnic@TPM2 transcript589.chr9.nnic protein_coding 35689704,35689146,35685647,35685434,35685269,35685064,35684732,35684488,35684246,35681995 35691146,35689271,35685780,35685551,35685339,35685139,35684807,35684550,35684315,35682163 Gene ID= ENSG00000198467.13 TPM= 29.38 Transcript Type= NA chr9 35681992 35691020 35681992 35691020 - ENST00000378292.7@TPM2 ENST00000378292.7 protein_coding 35689704,35689146,35685647,35685434,35685269,35685064,35684488,35684246,35681992 35691020,35689271,35685780,35685551,35685339,35685139,35684550,35684315,35682163 Gene ID= ENSG00000198467.13 TPM= 397.94 Transcript Type= protein_coding chr9 35682010 35690943 35682010 35690943 - transcript596.chr9.nic@TPM2 transcript596.chr9.nic protein_coding 35689704,35689146,35685647,35685434,35685269,35685064,35684488,35684246,35682010 35690943,35689271,35685780,35685551,35685339,35685139,35684550,35684315,35683241 Gene ID= ENSG00000198467.13 TPM= 18.11 Transcript Type= NA chr9 35681995 35691092 35681995 35691092 - transcript598.chr9.nic@TPM2 transcript598.chr9.nic protein_coding 35689704,35689146,35685647,35685434,35685269,35684488,35684246,35681995 35691092,35689271,35685780,35685551,35685339,35685139,35684315,35682163 Gene ID= ENSG00000198467.13 TPM= 33.91 Transcript Type= NA chr9 35682014 35689913 35682014 35689913 - ENST00000329305.6@TPM2 ENST00000329305.6 protein_coding 35689704,35689146,35685647,35685434,35685269,35684732,35684488,35684246,35682014 35689913,35689271,35685780,35685551,35685339,35684807,35684550,35684315,35682163 Gene ID= ENSG00000198467.13 TPM= 31.88 Transcript Type= protein_coding chr9 35697338 35700244 35697338 35700244 - transcript645.chr9.nic@TLN1 transcript645.chr9.nic protein_coding 35699974,35699356,35699032,35698808,35698617,35698323,35698044,35697338 35700244,35699461,35699156,35698933,35698679,35698505,35698172,35697916 Gene ID= ENSG00000137076.20 TPM= 41.2 Transcript Type= NA chr9 35732137 35738887 35732137 35738887 + transcript639.chr9.nnic@CREB3 transcript639.chr9.nnic protein_coding 35732137,35732996,35733215,35733396,35735109,35735306,35736048,35736227,35736392,35738620 35732901,35733143,35733282,35733485,35735215,35735374,35736132,35736311,35738367,35738887 Gene ID= ENSG00000107175.11 TPM= 6.6 Transcript Type= NA chr9 35732335 35737004 35732335 35737004 + ENST00000353704.2@CREB3 ENST00000353704.2 protein_coding 35732335,35732996,35733215,35733396,35735109,35735306,35736048,35736227,35736392 35732901,35733143,35733282,35733485,35735215,35735374,35736132,35736311,35737004 Gene ID= ENSG00000107175.11 TPM= 109.57 Transcript Type= protein_coding chr9 35736866 35749257 35736866 35749257 - transcript615.chr9.nnic@GBA2 transcript615.chr9.nnic protein_coding 35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866 35749257,35744706,35744412,35741908,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447 Gene ID= ENSG00000070610.14 TPM= 4.79 Transcript Type= NA chr9 35736866 35749201 35736866 35749201 - transcript620.chr9.nnic@GBA2 transcript620.chr9.nnic protein_coding 35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738818,35738526,35738232,35738037,35737748,35736866 35749201,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447 Gene ID= ENSG00000070610.14 TPM= 2.98 Transcript Type= NA chr9 35736866 35749257 35736866 35749257 - transcript621.chr9.nnic@GBA2 transcript621.chr9.nnic protein_coding 35748346,35744615,35744297,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866 35749257,35744706,35744412,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447 Gene ID= ENSG00000070610.14 TPM= 7.51 Transcript Type= NA chr9 35736866 35749257 35736866 35749257 - transcript622.chr9.nic@GBA2 transcript622.chr9.nic protein_coding 35748346,35744615,35744297,35741672,35740825,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866 35749257,35744706,35744412,35741890,35741064,35740628,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447 Gene ID= ENSG00000070610.14 TPM= 4.79 Transcript Type= NA chr9 35736866 35749228 35736866 35749228 - ENST00000378103.7@GBA2 ENST00000378103.7 protein_coding 35748346,35744615,35744297,35741672,35740825,35740526,35740209,35739998,35739628,35739315,35739002,35738752,35738526,35738232,35738037,35737748,35736866 35749228,35744706,35744412,35741890,35741064,35740628,35740362,35740123,35739800,35739419,35739109,35738903,35738632,35738374,35738152,35737939,35737447 Gene ID= ENSG00000070610.14 TPM= 65.46 Transcript Type= protein_coding chr9 35809819 35812170 35809819 35812170 - ENST00000396638.6@SPAG8 ENST00000396638.6 protein_coding 35812104,35811182,35810883,35810637,35810439,35810247,35809819 35812170,35812001,35811057,35810682,35810553,35810309,35810132 Gene ID= ENSG00000137098.13 TPM= 1.81 Transcript Type= protein_coding chr9 35812960 35815354 35812960 35815354 - ENST00000474848.6@HINT2 ENST00000474848.6 protein_coding 35815007,35813644,35813445,35813266,35812960 35815354,35813784,35813549,35813338,35813145 Gene ID= ENSG00000137133.10 TPM= 4.98 Transcript Type= processed_transcript chr9 35812962 35815041 35812962 35815041 - transcript662.chr9.nnic@HINT2 transcript662.chr9.nnic protein_coding 35814899,35813644,35813445,35813266,35812962 35815041,35813784,35813549,35813338,35813156 Gene ID= ENSG00000137133.10 TPM= 6.34 Transcript Type= NA chr9 35812960 35815021 35812960 35815021 - ENST00000259667.5@HINT2 ENST00000259667.5 protein_coding 35814899,35813644,35813445,35813266,35812960 35815021,35813784,35813549,35813338,35813145 Gene ID= ENSG00000137133.10 TPM= 77.42 Transcript Type= protein_coding chr9 35812974 35815021 35812974 35815021 - ENST00000461169.1@HINT2 ENST00000461169.1 protein_coding 35814899,35813644,35813445,35812974 35815021,35813784,35813549,35813338 Gene ID= ENSG00000137133.10 TPM= 4.53 Transcript Type= processed_transcript chr9 35829256 35856239 35829256 35856239 + transcript668.chr9.nic@TMEM8B transcript668.chr9.nic protein_coding 35829256,35841134,35841526,35842392,35845975,35846258,35846469,35846817,35852827,35853141,35853505 35829955,35841267,35841794,35842717,35846068,35846381,35846611,35846995,35852973,35853257,35856239 Gene ID= ENSG00000137103.17 TPM= 11.77 Transcript Type= NA chr9 35829250 35847236 35829250 35847236 + transcript671.chr9.nic@TMEM8B transcript671.chr9.nic protein_coding 35829250,35834461,35835011,35841134,35841526,35842392,35845975,35846258,35846469,35846817 35829955,35834650,35835218,35841267,35841794,35842717,35846068,35846381,35846611,35847236 Gene ID= ENSG00000137103.17 TPM= 6.79 Transcript Type= NA chr9 35829256 35847236 35829256 35847236 + transcript673.chr9.nic@TMEM8B transcript673.chr9.nic protein_coding 35829256,35841134,35841526,35842392,35845975,35846258,35846469,35846817 35829955,35841267,35841794,35842717,35846068,35846381,35846611,35847236 Gene ID= ENSG00000137103.17 TPM= 4.98 Transcript Type= NA chr9 35909483 35911686 35909483 35911686 + ENST00000443779.1@SPAAR ENST00000443779.1 protein_coding 35909483,35910157 35909564,35911686 Gene ID= ENSG00000235387.2 TPM= 2.72 Transcript Type= protein_coding chr9 36136745 36163913 36136745 36163913 + ENST00000377960.8@GLIPR2 ENST00000377960.8 protein_coding 36136745,36147786,36148547,36150872,36162362 36136791,36147894,36148650,36150949,36163913 Gene ID= ENSG00000122694.15 TPM= 29.88 Transcript Type= protein_coding chr9 36190856 36212061 36190856 36212061 + ENST00000538225.5@CLTA ENST00000538225.5 protein_coding 36190856,36197551,36198979,36204068,36210625,36211604 36191273,36197588,36199096,36204179,36210661,36212061 Gene ID= ENSG00000122705.16 TPM= 3.85 Transcript Type= protein_coding chr9 36190856 36212061 36190856 36212061 + ENST00000540080.5@CLTA ENST00000540080.5 protein_coding 36190856,36204068,36211603 36191273,36204179,36212061 Gene ID= ENSG00000122705.16 TPM= 1.13 Transcript Type= protein_coding chr9 36190923 36212056 36190923 36212056 + ENST00000345519.9@CLTA ENST00000345519.9 protein_coding 36190923,36197551,36198979,36204068,36211603 36191273,36197588,36199096,36204179,36212056 Gene ID= ENSG00000122705.16 TPM= 221.18 Transcript Type= protein_coding chr9 36190932 36212058 36190932 36212058 + ENST00000470744.5@CLTA ENST00000470744.5 protein_coding 36190932,36197551,36198979,36204068,36210625,36211603 36191273,36197588,36199096,36204179,36210660,36212058 Gene ID= ENSG00000122705.16 TPM= 2.94 Transcript Type= protein_coding chr9 36336396 36487712 36336396 36487712 - transcript693.chr9.nic@RNF38 transcript693.chr9.nic protein_coding 36487308,36424613,36390467,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336396 36487712,36424683,36390616,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814 Gene ID= ENSG00000137075.17 TPM= 4.53 Transcript Type= NA chr9 36336396 36487649 36336396 36487649 - transcript696.chr9.nnic@RNF38 transcript696.chr9.nnic protein_coding 36487308,36424613,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336396 36487649,36424683,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814 Gene ID= ENSG00000137075.17 TPM= 4.53 Transcript Type= NA chr9 36336396 36401203 36336396 36401203 - transcript699.chr9.nnic@RNF38 transcript699.chr9.nnic protein_coding 36401098,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336396 36401203,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814 Gene ID= ENSG00000137075.17 TPM= 4.53 Transcript Type= NA chr9 36336404 36400923 36336404 36400923 - ENST00000350199.8@RNF38 ENST00000350199.8 protein_coding 36400554,36375934,36369719,36357775,36356303,36353170,36352742,36351115,36344832,36342325,36336404 36400923,36376127,36369932,36357942,36356473,36353331,36352848,36351199,36344953,36342424,36339814 Gene ID= ENSG00000137075.17 TPM= 8.15 Transcript Type= protein_coding chr9 37079857 37090507 37079857 37090507 + ENST00000625445.1@EBLN3P ENST00000625445.1 lincRNA 37079857,37086668 37080536,37090507 Gene ID= ENSG00000281649.1 TPM= 88.74 Transcript Type= lincRNA chr9 37120573 37358146 37120573 37358146 + transcript710.chr9.nnic@ZCCHC7 transcript710.chr9.nnic protein_coding 37120573,37126312,37302188,37304188,37305544,37327799,37349357,37354710,37356835 37120776,37126942,37302231,37304313,37305714,37327834,37349452,37354824,37358146 Gene ID= ENSG00000147905.17 TPM= 5.89 Transcript Type= NA chr9 37120539 37358149 37120539 37358149 + ENST00000336755.9@ZCCHC7 ENST00000336755.9 protein_coding 37120539,37126312,37302188,37304188,37305544,37327799,37349357,37354710,37356835 37120623,37126942,37302231,37304313,37305714,37327834,37349452,37354824,37358149 Gene ID= ENSG00000147905.17 TPM= 9.51 Transcript Type= protein_coding chr9 37422654 37436988 37422654 37436988 + transcript722.chr9.nic@GRHPR transcript722.chr9.nic protein_coding 37422654,37424845,37425922,37426538,37428484,37430511,37436661 37422833,37424975,37425994,37426654,37429836,37432138,37436988 Gene ID= ENSG00000137106.17 TPM= 4.53 Transcript Type= NA chr9 37422666 37436990 37422666 37436990 + ENST00000318158.10@GRHPR ENST00000318158.10 protein_coding 37422666,37424845,37425922,37426538,37428484,37429732,37430511,37432008,37436661 37422833,37424975,37425994,37426654,37428572,37429836,37430646,37432138,37436990 Gene ID= ENSG00000137106.17 TPM= 229.1 Transcript Type= protein_coding chr9 37422746 37434879 37422746 37434879 + ENST00000607784.1@GRHPR ENST00000607784.1 protein_coding 37422746,37424845,37425922,37426538,37428484,37429732,37430511,37432008,37434046 37422833,37424975,37425994,37426654,37428572,37429836,37430646,37432138,37434879 Gene ID= ENSG00000137106.17 TPM= 1.81 Transcript Type= protein_coding chr9 37485935 37503697 37485935 37503697 + ENST00000377798.8@POLR1E ENST00000377798.8 protein_coding 37485935,37486703,37487863,37489315,37492657,37493559,37495169,37495890,37498091,37500840,37501713,37503043 37486123,37486806,37487939,37489400,37492715,37493703,37495276,37495986,37498224,37500921,37501844,37503697 Gene ID= ENSG00000137054.15 TPM= 14.49 Transcript Type= protein_coding chr9 37510892 37576253 37510892 37576253 - ENST00000432825.6@FBXO10 ENST00000432825.6 protein_coding 37576211,37541184,37537110,37531909,37529124,37525102,37522825,37521569,37518125,37515904,37510892 37576253,37541774,37537943,37532058,37529260,37525172,37522977,37521838,37518438,37516085,37512721 Gene ID= ENSG00000147912.12 TPM= 5.43 Transcript Type= protein_coding chr9 37588413 37592642 37588413 37592642 - ENST00000321301.6@TOMM5 ENST00000321301.6 protein_coding 37592412,37588413 37592642,37588932 Gene ID= ENSG00000175768.12 TPM= 89.65 Transcript Type= protein_coding chr9 37753773 37778965 37753773 37778965 + transcript742.chr9.nic@TRMT10B transcript742.chr9.nic protein_coding 37753773,37761903,37762577,37763629,37768076,37769941,37770672,37776282,37777628 37753852,37762117,37762685,37763865,37768228,37770019,37770739,37776405,37778965 Gene ID= ENSG00000165275.9 TPM= 2.11 Transcript Type= NA chr9 37753773 37778971 37753773 37778971 + transcript744.chr9.nic@TRMT10B transcript744.chr9.nic protein_coding 37753773,37761903,37763629,37768076,37769941,37770672,37776282,37777601 37753852,37762117,37763865,37768228,37770019,37770739,37776405,37778971 Gene ID= ENSG00000165275.9 TPM= 2.72 Transcript Type= NA chr9 37753817 37778022 37753817 37778022 + ENST00000488673.6@TRMT10B ENST00000488673.6 protein_coding 37753817,37761903,37762577,37763629,37768076,37769941,37770672,37776282,37777601 37753852,37762117,37762685,37763865,37768228,37770019,37770739,37776405,37778022 Gene ID= ENSG00000165275.9 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr9 37753803 37778965 37753803 37778965 + ENST00000377753.6@TRMT10B ENST00000377753.6 protein_coding 37753803,37761903,37768076,37769941,37770672,37776282,37777628 37753852,37762117,37768228,37770019,37770739,37776405,37778965 Gene ID= ENSG00000165275.9 TPM= 2.56 Transcript Type= protein_coding chr9 37753817 37778972 37753817 37778972 + ENST00000297994.3@TRMT10B ENST00000297994.3 protein_coding 37753817,37761903,37762577,37763629,37768076,37769941,37770672,37776282,37777601 37753852,37762117,37762685,37763753,37768228,37770019,37770739,37776405,37778972 Gene ID= ENSG00000165275.9 TPM= 4.83 Transcript Type= protein_coding chr9 37780464 37904352 37780464 37904352 - transcript751.chr9.nnic@SLC25A51 transcript751.chr9.nnic protein_coding 37904068,37899829,37881518,37832063,37783914,37781986,37780464 37904352,37899950,37881631,37832141,37784063,37782137,37780880 Gene ID= ENSG00000122696.13 TPM= 1.81 Transcript Type= NA chr9 37847866 37904120 37847866 37904120 - transcript763.chr9.nnic@SLC25A51 transcript763.chr9.nnic protein_coding 37904068,37899829,37881518,37847866 37904120,37899950,37881631,37848965 Gene ID= ENSG00000122696.13 TPM= 1.81 Transcript Type= NA chr9 37879400 37904353 37879400 37904353 - ENST00000496760.5@SLC25A51 ENST00000496760.5 protein_coding 37904068,37899829,37881518,37879400 37904353,37899950,37881631,37880748 Gene ID= ENSG00000122696.13 TPM= 1.81 Transcript Type= processed_transcript chr9 37800767 37867296 37800767 37867296 + transcript756.chr9.nic@DCAF10 transcript756.chr9.nic protein_coding 37800767,37819288,37842089,37854780,37860048,37861140 37801405,37819401,37842286,37854982,37860193,37867296 Gene ID= ENSG00000122741.15 TPM= 13.88 Transcript Type= NA chr9 37800767 37867296 37800767 37867296 + transcript758.chr9.nic@DCAF10 transcript758.chr9.nic protein_coding 37800767,37819288,37854780,37857241,37860048,37861140 37801405,37819401,37854982,37857351,37860193,37867296 Gene ID= ENSG00000122741.15 TPM= 27.47 Transcript Type= NA chr9 37919134 38069211 37919134 38069211 - ENST00000377707.3@SHB ENST00000377707.3 protein_coding 38067929,38016011,37974622,37955883,37948635,37919134 38069211,38016131,37974837,37956054,37948754,37920004 Gene ID= ENSG00000107338.9 TPM= 56.14 Transcript Type= protein_coding chr9 38392664 38398661 38392664 38398661 + ENST00000377698.3@ALDH1B1 ENST00000377698.3 protein_coding 38392664,38395740 38392807,38398661 Gene ID= ENSG00000137124.7 TPM= 62.48 Transcript Type= protein_coding chr9 39807361 39810063 39807361 39810063 - ENST00000625350.1@GLIDR ENST00000625350.1 lincRNA 39809731,39807361 39810063,39809615 Gene ID= ENSG00000278175.3 TPM= 10.87 Transcript Type= lincRNA chr9 39807695 39810013 39807695 39810013 - ENST00000627065.1@GLIDR ENST00000627065.1 lincRNA 39809731,39809486,39807695 39810013,39809615,39808761 Gene ID= ENSG00000278175.3 TPM= 2.72 Transcript Type= lincRNA chr9 39816541 39874556 39816541 39874556 - transcript780.chr9.nnic@BX664615.2 transcript780.chr9.nnic processed_transcript 39873910,39830013,39818821,39816541 39874556,39830110,39818924,39817729 Gene ID= ENSG00000283886.1 TPM= 1.81 Transcript Type= NA chr9 39813785 39874433 39813785 39874433 - transcript781.chr9.nnic@BX664615.2 transcript781.chr9.nnic processed_transcript 39873910,39863833,39818821,39813785 39874433,39863942,39818924,39817729 Gene ID= ENSG00000283886.1 TPM= 7.24 Transcript Type= NA chr9 40992229 41014131 40992229 41014131 + transcript801.chr9.nnic@FRG1HP transcript801.chr9.nnic transcribed_unprocessed_pseudogene 40992229,40993253,40994633,41007440,41011617,41013781 40992775,40993434,40994699,41007609,41011730,41014131 Gene ID= ENSG00000276291.5 TPM= 3.62 Transcript Type= NA chr9 40992229 41009335 40992229 41009335 + transcript811.chr9.nic@FRG1HP transcript811.chr9.nic transcribed_unprocessed_pseudogene 40992229,40993253,40994633,41007440 40992775,40993434,40994699,41009335 Gene ID= ENSG00000276291.5 TPM= 2.72 Transcript Type= NA chr9 41131310 41189375 41131310 41189375 - transcript815.chr9.nic@CBWD6 transcript815.chr9.nic protein_coding 41189105,41185993,41183564,41182375,41172712,41166784,41165001,41162333,41156383,41145281,41133674,41133505,41132228,41131310 41189375,41186079,41183660,41182466,41172749,41166830,41165087,41162377,41156439,41145332,41133742,41133570,41132357,41131840 Gene ID= ENSG00000215126.10 TPM= 2.72 Transcript Type= NA chr9 41131310 41189375 41131310 41189375 - transcript817.chr9.nic@CBWD6 transcript817.chr9.nic protein_coding 41189105,41185993,41183564,41182375,41172712,41166784,41162333,41156383,41145281,41133674,41133505,41132228,41131310 41189375,41186079,41183660,41182466,41172749,41166830,41162377,41156439,41145332,41133742,41133570,41132357,41131840 Gene ID= ENSG00000215126.10 TPM= 2.72 Transcript Type= NA chr9 41358864 41481607 41358864 41481607 + transcript818.chr9.nnic@AL354718.1 transcript818.chr9.nnic processed_pseudogene 41358864,41474878,41479945 41359152,41475053,41481607 Gene ID= ENSG00000275160.1 TPM= 3.62 Transcript Type= NA chr9 41923210 42129451 41923210 42129451 - transcript819.chr9.nic@CNTNAP3B transcript819.chr9.nic protein_coding 42129010,42104629,42076869,42013378,41998401,41997568,41996205,41991610,41986168,41960773,41953183,41938244,41929317,41923210 42129451,42104739,42077062,42013525,41998604,41997752,41996348,41991871,41986311,41960892,41953383,41938400,41929444,41924093 Gene ID= ENSG00000154529.14 TPM= 1.81 Transcript Type= NA chr9 61856506 61973622 61856506 61973622 + transcript825.chr9.nnic@AL391987.2 transcript825.chr9.nnic lincRNA 61856506,61917468,61972190 61856814,61917607,61973622 Gene ID= ENSG00000223379.1 TPM= 1.81 Transcript Type= NA chr9 62376520 62435256 62376520 62435256 + transcript829.chr9.nnic@FGF7P6 transcript829.chr9.nnic transcribed_unprocessed_pseudogene 62376520,62386774,62432876,62434067 62376813,62386883,62432979,62435256 Gene ID= ENSG00000227449.8 TPM= 1.81 Transcript Type= NA chr9 62865597 62898087 62865597 62898087 - ENST00000445604.6@AL512625.3 ENST00000445604.6 lincRNA 62897419,62869190,62867697,62866967,62865597 62898087,62869304,62868233,62867110,62865733 Gene ID= ENSG00000234665.8 TPM= 1.81 Transcript Type= lincRNA chr9 65675799 65734041 65675799 65734041 + ENST00000382405.7@CBWD5 ENST00000382405.7 protein_coding 65675799,65679166,65681574,65682766,65690967,65692571,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65732993,65733510 65676130,65679252,65681670,65682857,65691026,65692608,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733122,65734041 Gene ID= ENSG00000147996.16 TPM= 35.32 Transcript Type= protein_coding chr9 65675868 65734039 65675868 65734039 + transcript849.chr9.nic@CBWD5 transcript849.chr9.nic protein_coding 65675868,65679166,65681574,65682766,65690967,65692571,65698515,65702970,65708902,65720041,65731630,65731802,65732993,65733510 65676130,65679252,65681670,65682857,65691026,65692608,65698561,65703014,65708958,65720092,65731698,65731867,65733122,65734039 Gene ID= ENSG00000147996.16 TPM= 4.53 Transcript Type= NA chr9 65675875 65682577 65675875 65682577 + ENST00000377384.5@CBWD5 ENST00000377384.5 protein_coding 65675875,65679166,65681574 65676130,65679252,65682577 Gene ID= ENSG00000147996.16 TPM= 44.37 Transcript Type= protein_coding chr9 65675896 65733670 65675896 65733670 + ENST00000497250.5@CBWD5 ENST00000497250.5 protein_coding 65675896,65679166,65681574,65682766,65690967,65692571,65693386,65698515,65700251,65702970,65708902,65720041,65731630,65731802,65732993,65733510 65676130,65679252,65681670,65682857,65691026,65692608,65693473,65698561,65700337,65703014,65708958,65720092,65731698,65731867,65733122,65733670 Gene ID= ENSG00000147996.16 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr9 66900729 66921439 66900729 66921439 + ENST00000621410.4@ZNF658 ENST00000621410.4 protein_coding 66900729,66903518,66908238,66908639,66917805 66900836,66903576,66908364,66908734,66921439 Gene ID= ENSG00000274349.4 TPM= 1.81 Transcript Type= protein_coding chr9 67059125 67263637 67059125 67263637 + transcript855.chr9.nnic@CNTNAP3P2 transcript855.chr9.nnic unprocessed_pseudogene 67059125,67082692,67110397,67173860,67188785,67189638,67191032,67195516,67201076,67226569,67234108,67249101,67258031,67263404 67059643,67082802,67110590,67174007,67188988,67189822,67191175,67195777,67201219,67226688,67234311,67249257,67258158,67263637 Gene ID= ENSG00000276386.1 TPM= 1.81 Transcript Type= NA chr9 68356598 68430942 68356598 68430942 + transcript870.chr9.nnic@PGM5 transcript870.chr9.nnic protein_coding 68356598,68378199,68384398,68387463,68391534,68392319,68429687 68357388,68378361,68384544,68387588,68391724,68392473,68430942 Gene ID= ENSG00000154330.12 TPM= 1.81 Transcript Type= NA chr9 68356899 68531061 68356899 68531061 + ENST00000396396.5@PGM5 ENST00000396396.5 protein_coding 68356899,68378199,68384398,68387463,68391534,68392319,68465093,68479418,68483865,68499227,68529567 68357388,68378361,68384544,68387588,68391724,68392473,68465208,68479553,68484048,68499361,68531061 Gene ID= ENSG00000154330.12 TPM= 62.48 Transcript Type= protein_coding chr9 68355189 68357852 68355189 68357852 - ENST00000417887.1@PGM5-AS1 ENST00000417887.1 antisense_RNA 68357723,68355189 68357852,68355605 Gene ID= ENSG00000224958.5 TPM= 8.15 Transcript Type= antisense_RNA chr9 68780041 69009174 68780041 69009174 + transcript875.chr9.nnic@PIP5K1B transcript875.chr9.nnic protein_coding 68780041,68818461,68822615,68863837,68876677,68888981,68894339,68917548,68919479,68919681,68923302,68934890,68940646,68991140,69008447 68782658,68818545,68822683,68863967,68876794,68889133,68894638,68917759,68919562,68919729,68923386,68935045,68940790,68991257,69009174 Gene ID= ENSG00000107242.17 TPM= 19.02 Transcript Type= NA chr9 68705700 69009175 68705700 69009175 + ENST00000265382.7@PIP5K1B ENST00000265382.7 protein_coding 68705700,68742501,68818461,68822615,68863837,68876677,68888981,68894339,68917548,68919479,68919681,68923302,68934890,68940646,68991140,69008447 68705762,68742657,68818545,68822683,68863967,68876794,68889133,68894638,68917759,68919562,68919729,68923386,68935045,68940790,68991257,69009175 Gene ID= ENSG00000107242.17 TPM= 2.72 Transcript Type= protein_coding chr9 69174165 69255204 69174165 69255204 + ENST00000377245.8@TJP2 ENST00000377245.8 protein_coding 69174165,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69249375,69251035,69252815,69254209 69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69249485,69251364,69252900,69255204 Gene ID= ENSG00000119139.17 TPM= 57.53 Transcript Type= protein_coding chr9 69174277 69255204 69174277 69255204 + ENST00000348208.8@TJP2 ENST00000348208.8 protein_coding 69174277,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012,69252815,69254209 69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248224,69252900,69255204 Gene ID= ENSG00000119139.17 TPM= 2.72 Transcript Type= protein_coding chr9 69174294 69248990 69174294 69248990 + ENST00000636247.1@TJP2 ENST00000636247.1 protein_coding 69174294,69212548,69216339,69218257,69220887,69225304,69226022,69227765,69227981,69229184,69230082,69234439,69236028,69236949,69237878,69238710,69239937,69246690,69248012 69174432,69212601,69216463,69218359,69221496,69225407,69226175,69227873,69228114,69229250,69230232,69234547,69236238,69237136,69237973,69238789,69240147,69246790,69248990 Gene ID= ENSG00000119139.17 TPM= 1.81 Transcript Type= retained_intron chr9 69325095 69392598 69325095 69392598 + transcript901.chr9.nnic@FAM189A2 transcript901.chr9.nnic protein_coding 69325095,69336213,69371499,69375736,69377370,69377611,69383630,69383947,69385795,69388158,69391601 69325723,69336269,69371609,69375864,69377477,69377744,69383759,69384025,69385947,69388450,69392598 Gene ID= ENSG00000135063.17 TPM= 19.92 Transcript Type= NA chr9 70258962 70354888 70258962 70354888 + ENST00000361138.6@SMC5 ENST00000361138.6 protein_coding 70258962,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70346605,70347066,70347613,70347919,70350114,70350376,70352191 70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70346649,70347161,70347717,70348038,70350293,70350471,70354888 Gene ID= ENSG00000198887.8 TPM= 2.26 Transcript Type= protein_coding chr9 70258968 70354871 70258968 70354871 + transcript908.chr9.nnic@SMC5 transcript908.chr9.nnic protein_coding 70258968,70264304,70267923,70277310,70278491,70280759,70282422,70286200,70297966,70300046,70305247,70314742,70315446,70318514,70318794,70323483,70324021,70344144,70347066,70347613,70347919,70350114,70350376,70352191 70259263,70264445,70267975,70277472,70278625,70280899,70282583,70286271,70298221,70300200,70305360,70314836,70315578,70318687,70318963,70323606,70324143,70344269,70347161,70347717,70348038,70350293,70350471,70354871 Gene ID= ENSG00000198887.8 TPM= 3.17 Transcript Type= NA chr9 70601956 70608271 70601956 70608271 + transcript912.chr9.nnic@NA transcript912.chr9.nnic NA 70601956,70603366,70604668,70607058 70602094,70604280,70604747,70608271 Gene ID= novel_gene_chr9_913 TPM= 1.81 Transcript Type= NA chr9 71683366 71768884 71683366 71768884 - ENST00000377044.8@TMEM2 ENST00000377044.8 protein_coding 71768357,71750043,71746201,71745018,71740063,71734806,71732351,71730705,71730048,71729845,71725581,71722427,71717948,71716517,71714934,71712083,71709259,71704595,71700642,71697985,71694509,71690092,71685743,71683366 71768884,71750385,71746341,71745579,71740232,71734994,71732520,71730914,71730253,71729914,71725709,71722515,71718079,71716552,71715089,71712260,71709474,71704803,71700824,71698204,71694607,71690246,71685846,71685393 Gene ID= ENSG00000135048.13 TPM= 8.15 Transcript Type= protein_coding chr9 71911640 71986046 71911640 71986046 + transcript924.chr9.nnic@C9orf85 transcript924.chr9.nnic protein_coding 71911640,71947006,71982657 71911836,71947112,71986046 Gene ID= ENSG00000155621.14 TPM= 4.53 Transcript Type= NA chr9 72354458 72365235 72354458 72365235 - ENST00000376960.8@ZFAND5 ENST00000376960.8 protein_coding 72364696,72360628,72360110,72359418,72356931,72354458 72365235,72360787,72360221,72359521,72357056,72356101 Gene ID= ENSG00000107372.12 TPM= 74.71 Transcript Type= protein_coding chr9 72354458 72365197 72354458 72365197 - ENST00000376962.9@ZFAND5 ENST00000376962.9 protein_coding 72364696,72363470,72360628,72360110,72359418,72356931,72354458 72365197,72363606,72360787,72360221,72359521,72357056,72356101 Gene ID= ENSG00000107372.12 TPM= 144.43 Transcript Type= protein_coding chr9 72900662 72953055 72900662 72953055 - ENST00000297785.7@ALDH1A1 ENST00000297785.7 protein_coding 72952935,72940148,72930879,72928892,72927116,72925484,72924019,72918720,72916920,72911958,72909602,72905958,72900662 72953055,72940252,72931019,72929021,72927177,72925612,72924132,72918822,72917104,72912122,72909759,72906032,72901280 Gene ID= ENSG00000165092.12 TPM= 409.31 Transcript Type= protein_coding chr9 73151865 73170393 73151865 73170393 + transcript938.chr9.nnic@ANXA1 transcript938.chr9.nnic protein_coding 73151865,73154461,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051 73151924,73154581,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393 Gene ID= ENSG00000135046.13 TPM= 1.81 Transcript Type= NA chr9 73151757 73170393 73151757 73170393 + ENST00000257497.10@ANXA1 ENST00000257497.10 protein_coding 73151757,73158522,73158695,73159329,73160263,73160803,73162782,73163476,73165116,73166097,73167497,73169032,73170051 73151924,73158601,73158803,73159423,73160376,73160893,73162861,73163532,73165209,73166192,73167555,73169154,73170393 Gene ID= ENSG00000135046.13 TPM= 75.16 Transcript Type= protein_coding chr9 74946581 74952886 74946581 74952886 - ENST00000376854.5@C9orf40 ENST00000376854.5 protein_coding 74952186,74946581 74952886,74948206 Gene ID= ENSG00000135045.6 TPM= 9.06 Transcript Type= protein_coding chr9 74981020 75028394 74981020 75028394 - ENST00000376834.7@CARNMT1 ENST00000376834.7 protein_coding 75028012,75017253,75016268,74999730,74998598,74996447,74984907,74981020 75028394,75017448,75016431,74999870,74998776,74996560,74985010,74983868 Gene ID= ENSG00000156017.12 TPM= 9.96 Transcript Type= protein_coding chr9 75061202 75088185 75061202 75088185 - transcript947.chr9.nnic@NMRK1 transcript947.chr9.nnic protein_coding 75088008,75083087,75080815,75078705,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75061202 75088185,75083150,75080941,75078831,75078611,75077580,75077207,75070042,75069813,75069102,75066840,75061567 Gene ID= ENSG00000106733.20 TPM= 1.81 Transcript Type= NA chr9 75061202 75088205 75061202 75088205 - transcript948.chr9.nnic@NMRK1 transcript948.chr9.nnic protein_coding 75088008,75083087,75078705,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75061202 75088205,75083150,75080941,75078611,75077580,75077207,75070042,75069813,75069102,75066840,75061567 Gene ID= ENSG00000106733.20 TPM= 3.62 Transcript Type= NA chr9 75061202 75088206 75061202 75088206 - transcript951.chr9.nnic@NMRK1 transcript951.chr9.nnic protein_coding 75088008,75083087,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75061202 75088206,75083150,75078611,75077580,75077207,75070042,75069813,75069102,75066840,75061567 Gene ID= ENSG00000106733.20 TPM= 1.81 Transcript Type= NA chr9 75060573 75088190 75060573 75088190 - ENST00000376811.5@NMRK1 ENST00000376811.5 protein_coding 75088008,75083087,75078326,75077490,75077159,75069895,75069742,75068996,75066757,75060573 75088190,75083150,75078582,75077580,75077207,75070042,75069813,75069102,75066840,75061567 Gene ID= ENSG00000106733.20 TPM= 7.24 Transcript Type= protein_coding chr9 75061200 75088209 75061200 75088209 - ENST00000361092.8@NMRK1 ENST00000361092.8 protein_coding 75088008,75083087,75077490,75077159,75069895,75069742,75068996,75066757,75061200 75088209,75083150,75077580,75077207,75070042,75069813,75069102,75066840,75061567 Gene ID= ENSG00000106733.20 TPM= 19.02 Transcript Type= protein_coding chr9 75890705 76195889 75890705 76195889 + ENST00000376752.8@PCSK5 ENST00000376752.8 protein_coding 75890705,75932379,75986132,76023738,76026961,76067955,76071726,76095890,76107251,76134109,76157045,76158983,76169704,76174986,76179596,76181398,76184673,76188578,76189094,76189631,76193237 75891373,75932483,75986245,76023881,76027037,76068043,76071898,76096102,76107351,76134212,76157162,76159171,76169840,76175129,76179698,76181591,76184757,76188675,76189223,76189746,76195889 Gene ID= ENSG00000099139.13 TPM= 19.02 Transcript Type= protein_coding chr9 76385517 76394505 76385517 76394505 - ENST00000376736.5@RFK ENST00000376736.5 protein_coding 76394090,76392418,76388554,76385517 76394505,76392569,76388656,76387529 Gene ID= ENSG00000135002.11 TPM= 56.14 Transcript Type= protein_coding chr9 76459152 76507414 76459152 76507414 + ENST00000444201.6@GCNT1 ENST00000444201.6 protein_coding 76459152,76500916,76502239 76459305,76501061,76507414 Gene ID= ENSG00000187210.12 TPM= 2.72 Transcript Type= protein_coding chr9 77403234 77417365 77403234 77417365 + transcript976.chr9.nic@VPS13A transcript976.chr9.nic protein_coding 77403234,77405864,77407533,77415956 77403321,77405987,77407607,77417365 Gene ID= ENSG00000197969.11 TPM= 2.72 Transcript Type= NA chr9 77718752 77823018 77718752 77823018 - transcript980.chr9.nnic@GNAQ transcript980.chr9.nnic protein_coding 77822891,77815616,77797520,77794463,77728514,77718752 77823018,77815770,77797648,77794592,77728667,77721513 Gene ID= ENSG00000156052.10 TPM= 19.92 Transcript Type= NA chr9 78236062 78279690 78236062 78279690 + ENST00000424347.6@CEP78 ENST00000424347.6 protein_coding 78236062,78240023,78240292,78241696,78243462,78246669,78248291,78248762,78251908,78253232,78254836,78262907,78264150,78265372,78266442,78270841 78236603,78240195,78240364,78241799,78243636,78246782,78248355,78248873,78252043,78253277,78254964,78262984,78264316,78265543,78266703,78279690 Gene ID= ENSG00000148019.12 TPM= 4.53 Transcript Type= protein_coding chr9 78297143 78330093 78297143 78330093 + ENST00000376588.3@PSAT1 ENST00000376588.3 protein_coding 78297143,78300602,78301954,78304735,78306314,78308414,78317676,78328051,78328981 78297270,78300662,78302023,78304940,78306486,78308583,78317804,78328188,78330093 Gene ID= ENSG00000135069.13 TPM= 200.13 Transcript Type= protein_coding chr9 79571934 79726837 79571934 79726837 + transcript999.chr9.nic@TLE4 transcript999.chr9.nic protein_coding 79571934,79573689,79574873,79576133,79612656,79627374,79652590,79654059,79704783,79705889,79706747,79708118,79708593,79709623,79718722,79720046,79721741,79722451,79722959,79725037 79572835,79573786,79574936,79576177,79612718,79627448,79652794,79654075,79704902,79705942,79706899,79708250,79708786,79709699,79718971,79720293,79721888,79722601,79723035,79726837 Gene ID= ENSG00000106829.18 TPM= 6.34 Transcript Type= NA chr9 79573158 79726741 79573158 79726741 + transcript1002.chr9.nic@TLE4 transcript1002.chr9.nic protein_coding 79573158,79573689,79574873,79576133,79612656,79627374,79652590,79654059,79704783,79705889,79706747,79708118,79708593,79709623,79718722,79720046,79721741,79722451,79722959,79725037 79573370,79573786,79574936,79576177,79612718,79627448,79652794,79654075,79704902,79705942,79706899,79708250,79708786,79709699,79718971,79720293,79721888,79722601,79723035,79726741 Gene ID= ENSG00000106829.18 TPM= 4.53 Transcript Type= NA chr9 79573214 79726741 79573214 79726741 + transcript1009.chr9.nnic@TLE4 transcript1009.chr9.nnic protein_coding 79573214,79573689,79574873,79576133,79627374,79652590,79654059,79704783,79705889,79706747,79708118,79708593,79709623,79718722,79720046,79721741,79722451,79722959,79725037 79573370,79573786,79574936,79576177,79627448,79652794,79654075,79704902,79705942,79706899,79708250,79708786,79709699,79718971,79720293,79721888,79722601,79723035,79726741 Gene ID= ENSG00000106829.18 TPM= 3.62 Transcript Type= NA chr9 81583684 81689666 81583684 81689666 - transcript1013.chr9.nnic@TLE1 transcript1013.chr9.nnic protein_coding 81688217,81687334,81685833,81685676,81653974,81652214,81634097,81633348,81620441,81616646,81615982,81613377,81612292,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583684 81689666,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81612393,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305 Gene ID= ENSG00000196781.14 TPM= 5.43 Transcript Type= NA chr9 81583684 81689593 81583684 81689593 - transcript1019.chr9.nic@TLE1 transcript1019.chr9.nic protein_coding 81688217,81687334,81685833,81685676,81653974,81652184,81634097,81633348,81620441,81616646,81615982,81613377,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583684 81689593,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305 Gene ID= ENSG00000196781.14 TPM= 20.83 Transcript Type= NA chr9 81633467 81689666 81633467 81689666 - transcript1032.chr9.nic@TLE1 transcript1032.chr9.nic protein_coding 81688217,81687334,81685833,81685676,81653974,81652214,81633467 81689666,81687434,81685896,81685720,81654036,81652288,81634301 Gene ID= ENSG00000196781.14 TPM= 59.77 Transcript Type= NA chr9 81583683 81689305 81583683 81689305 - ENST00000376499.7@TLE1 ENST00000376499.7 protein_coding 81688217,81687334,81685833,81685676,81653974,81652214,81634097,81633348,81620441,81616646,81615982,81613377,81611769,81610220,81593025,81590805,81587681,81585505,81584448,81583683 81689305,81687434,81685896,81685720,81654036,81652288,81634301,81633364,81620557,81616699,81616134,81613521,81611959,81610296,81593274,81591052,81587828,81585655,81584524,81584305 Gene ID= ENSG00000196781.14 TPM= 19.92 Transcript Type= protein_coding chr9 83659963 83708203 83659963 83708203 - ENST00000376395.8@UBQLN1 ENST00000376395.8 protein_coding 83707500,83686004,83682951,83679775,83678441,83677727,83669185,83666350,83665030,83663875,83659963 83708203,83686155,83683066,83680037,83678599,83677961,83669327,83666433,83665145,83664043,83661939 Gene ID= ENSG00000135018.13 TPM= 42.56 Transcript Type= protein_coding chr9 83661429 83707934 83661429 83707934 - ENST00000257468.11@UBQLN1 ENST00000257468.11 protein_coding 83707500,83686004,83682951,83679775,83678441,83677727,83669185,83665030,83663875,83661429 83707934,83686155,83683066,83680037,83678599,83677961,83669327,83665145,83664043,83661939 Gene ID= ENSG00000135018.13 TPM= 7.24 Transcript Type= protein_coding chr9 83739423 83817808 83739423 83817808 - transcript1062.chr9.nnic@GKAP1 transcript1062.chr9.nnic protein_coding 83817517,83816996,83815926,83806302,83799185,83788601,83784715,83780382,83753258,83748309,83742530,83741952,83739423 83817808,83817127,83816016,83806560,83799328,83788678,83784838,83780404,83753359,83748372,83742600,83742029,83739744 Gene ID= ENSG00000165113.12 TPM= 1.81 Transcript Type= NA chr9 83739421 83817742 83739421 83817742 - ENST00000376371.6@GKAP1 ENST00000376371.6 protein_coding 83817517,83816996,83806302,83799185,83788601,83784715,83780382,83768818,83753258,83748309,83742530,83741952,83739421 83817742,83817127,83806560,83799328,83788678,83784838,83780404,83768970,83753359,83748372,83742600,83742029,83739744 Gene ID= ENSG00000165113.12 TPM= 5.43 Transcript Type= protein_coding chr9 83938311 83956717 83938311 83956717 - ENST00000376344.7@C9orf64 ENST00000376344.7 protein_coding 83956164,83955381,83944794,83938311 83956717,83955640,83944989,83939743 Gene ID= ENSG00000165118.14 TPM= 24.45 Transcript Type= protein_coding chr9 83967400 83980691 83967400 83980691 - transcript1077.chr9.nic@HNRNPK transcript1077.chr9.nic protein_coding 83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83967400 83980691,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380 Gene ID= ENSG00000165119.20 TPM= 116.24 Transcript Type= NA chr9 83968084 83980269 83968084 83980269 - ENST00000376263.7@HNRNPK ENST00000376263.7 protein_coding 83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968084 83980269,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440 Gene ID= ENSG00000165119.20 TPM= 88.73 Transcript Type= protein_coding chr9 83968083 83980246 83968083 83980246 - transcript1083.chr9.nnic@HNRNPK transcript1083.chr9.nnic protein_coding 83980119,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083 83980246,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440 Gene ID= ENSG00000165119.20 TPM= 24.43 Transcript Type= NA chr9 83968079 83980274 83968079 83980274 - transcript1091.chr9.nic@HNRNPK transcript1091.chr9.nic protein_coding 83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968079 83980274,83978452,83978279,83977786,83977051,83975505,83974589,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380 Gene ID= ENSG00000165119.20 TPM= 22.96 Transcript Type= NA chr9 83968083 83980640 83968083 83980640 - transcript1092.chr9.nic@HNRNPK transcript1092.chr9.nic protein_coding 83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083 83980640,83978452,83978279,83977786,83977051,83975505,83974589,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380 Gene ID= ENSG00000165119.20 TPM= 51.19 Transcript Type= NA chr9 83968083 83980274 83968083 83980274 - transcript1099.chr9.nic@HNRNPK transcript1099.chr9.nic protein_coding 83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083 83980274,83978452,83978279,83977786,83977051,83975505,83974589,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440 Gene ID= ENSG00000165119.20 TPM= 24.06 Transcript Type= NA chr9 83968083 83980634 83968083 83980634 - transcript1100.chr9.nic@HNRNPK transcript1100.chr9.nic protein_coding 83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083 83980634,83978452,83978279,83977786,83977051,83975505,83974589,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440 Gene ID= ENSG00000165119.20 TPM= 34.17 Transcript Type= NA chr9 83968083 83980604 83968083 83980604 - ENST00000376281.8@HNRNPK ENST00000376281.8 protein_coding 83980503,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968083 83980604,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969440 Gene ID= ENSG00000165119.20 TPM= 135.06 Transcript Type= protein_coding chr9 83968909 83980250 83968909 83980250 - ENST00000360384.9@HNRNPK ENST00000360384.9 protein_coding 83980153,83978373,83978195,83977689,83976995,83975462,83974517,83973902,83973286,83972844,83971882,83971672,83971273,83970897,83970737,83970162,83968909 83980250,83978452,83978279,83977786,83977051,83975505,83974589,83973973,83973399,83972972,83972189,83971726,83971356,83970912,83970819,83970331,83969380 Gene ID= ENSG00000165119.20 TPM= 84.71 Transcript Type= protein_coding chr9 83980711 84002233 83980711 84002233 + ENST00000445877.5@RMI1 ENST00000445877.5 protein_coding 83980711,83999709,84000951 83980891,83999797,84002233 Gene ID= ENSG00000178966.16 TPM= 1.81 Transcript Type= protein_coding chr9 84669711 84815706 84669711 84815706 + ENST00000395882.5@NTRK2 ENST00000395882.5 protein_coding 84669711,84670377,84702159,84702348,84707844,84710637,84723573,84724224,84727654,84741892,84744973,84751986,84810542 84669888,84670960,84702233,84702419,84707912,84710791,84723709,84724356,84727959,84741927,84745073,84752085,84815706 Gene ID= ENSG00000148053.15 TPM= 1.81 Transcript Type= protein_coding chr9 85546540 85741979 85546540 85741979 - transcript1119.chr9.nnic@AGTPBP1 transcript1119.chr9.nnic protein_coding 85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85633137,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546540 85741979,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85633037,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286 Gene ID= ENSG00000135049.15 TPM= 1.81 Transcript Type= NA chr9 85546542 85741886 85546542 85741886 - ENST00000357081.7@AGTPBP1 ENST00000357081.7 protein_coding 85741775,85712502,85692689,85681268,85678335,85677436,85672550,85669485,85660936,85657435,85655143,85646321,85642827,85632662,85621202,85619215,85618983,85596362,85592560,85589528,85588298,85586831,85585463,85578920,85575315,85546542 85741886,85712566,85692813,85681335,85678398,85677582,85672681,85669578,85660973,85657643,85655320,85646418,85642943,85633374,85621285,85619301,85619131,85596449,85592704,85589681,85588478,85586960,85585594,85579096,85575475,85547286 Gene ID= ENSG00000135049.15 TPM= 1.81 Transcript Type= protein_coding chr9 85941075 86022665 85941075 86022665 + transcript1132.chr9.nic@NAA35 transcript1132.chr9.nic protein_coding 85941075,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901 85941874,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022665 Gene ID= ENSG00000135040.15 TPM= 14.49 Transcript Type= NA chr9 85941146 86022298 85941146 86022298 + ENST00000361671.9@NAA35 ENST00000361671.9 protein_coding 85941146,85942155,85956360,85958472,85959793,85962013,85974967,85975114,85976685,85977363,85978267,85996399,86003585,86007358,86009865,86013046,86013719,86016539,86017498,86018255,86018699,86020889,86021901 85941273,85942283,85956393,85958586,85959867,85962180,85975033,85975157,85976735,85977446,85978381,85996577,86003644,86007464,86009931,86013144,86013897,86016675,86017565,86018395,86018821,86020969,86022298 Gene ID= ENSG00000135040.15 TPM= 9.96 Transcript Type= protein_coding chr9 86026145 86099695 86026145 86099695 - transcript1158.chr9.nnic@GOLM1 transcript1158.chr9.nnic protein_coding 86099411,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026145 86099695,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027586 Gene ID= ENSG00000135052.16 TPM= 25.2 Transcript Type= NA chr9 86026146 86099558 86026146 86099558 - ENST00000388712.7@GOLM1 ENST00000388712.7 protein_coding 86099411,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026146 86099558,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027893 Gene ID= ENSG00000135052.16 TPM= 993.64 Transcript Type= protein_coding chr9 86026147 86100149 86026147 86100149 - ENST00000388711.7@GOLM1 ENST00000388711.7 protein_coding 86100025,86079192,86077412,86052537,86046470,86040739,86036348,86035368,86033282,86026147 86100149,86079341,86077591,86052591,86046572,86040868,86036507,86035625,86033395,86027893 Gene ID= ENSG00000135052.16 TPM= 26.51 Transcript Type= protein_coding chr9 86264546 86282529 86264546 86282529 - ENST00000375991.8@ISCA1 ENST00000375991.8 protein_coding 86282378,86274189,86272007,86264546 86282529,86274242,86272112,86266191 Gene ID= ENSG00000135070.14 TPM= 41.66 Transcript Type= protein_coding chr9 87497681 87708630 87497681 87708630 + ENST00000472284.5@DAPK1 ENST00000472284.5 protein_coding 87497681,87498970,87604954,87637943,87639354,87639650,87639789,87640298,87640802,87641969,87643376,87645895,87646461,87647305,87648781,87649921,87651527,87658029,87668597,87681404,87686551,87697007,87698656,87700117,87703029,87706132 87497772,87499139,87605175,87638081,87639483,87639698,87639815,87640450,87640847,87642058,87643468,87646014,87646559,87647403,87648879,87650118,87651724,87658127,87668674,87681626,87686739,87697204,87698794,87700237,87703217,87708630 Gene ID= ENSG00000196730.12 TPM= 3.62 Transcript Type= protein_coding chr9 87497881 87708628 87497881 87708628 + ENST00000408954.7@DAPK1 ENST00000408954.7 protein_coding 87497881,87498970,87604954,87637943,87639354,87639650,87639789,87640298,87640802,87641969,87643376,87645895,87646461,87647305,87648781,87649921,87651527,87658029,87668597,87681404,87686551,87697007,87698656,87700117,87703029,87706132 87498107,87499139,87605175,87638081,87639483,87639698,87639815,87640450,87640847,87642058,87643468,87646014,87646559,87647403,87648879,87650118,87651724,87658127,87668674,87681626,87686739,87697204,87698794,87700237,87703217,87708628 Gene ID= ENSG00000196730.12 TPM= 3.62 Transcript Type= protein_coding chr9 87726116 87731467 87726116 87731467 + transcript1191.chr9.nic@CTSL transcript1191.chr9.nic protein_coding 87726116,87727594,87728027,87728250,87728585,87729573,87730381,87731008 87726308,87727729,87728149,87728396,87728809,87729735,87730498,87731467 Gene ID= ENSG00000135047.14 TPM= 28.98 Transcript Type= NA chr9 87726109 87731386 87726109 87731386 + ENST00000340342.10@CTSL ENST00000340342.10 protein_coding 87726109,87727594,87728027,87728250,87728585,87729573,87730381,87731008 87726253,87727729,87728149,87728396,87728809,87729735,87730498,87731386 Gene ID= ENSG00000135047.14 TPM= 89.2 Transcript Type= protein_coding chr9 87964906 87974781 87964906 87974781 - transcript1200.chr9.nnic@CDK20 transcript1200.chr9.nnic protein_coding 87974372,87973922,87971147,87970776,87970568,87969796,87969194,87964906 87974781,87974035,87971335,87970897,87970645,87969919,87969349,87967659 Gene ID= ENSG00000156345.17 TPM= 6.57 Transcript Type= NA chr9 87964906 87974528 87964906 87974528 - transcript1201.chr9.nnic@CDK20 transcript1201.chr9.nnic protein_coding 87974372,87973922,87972122,87971147,87970568,87969796,87969194,87964906 87974528,87974035,87972197,87971335,87970897,87969919,87969349,87967659 Gene ID= ENSG00000156345.17 TPM= 2.94 Transcript Type= NA chr9 87964906 87974730 87964906 87974730 - transcript1205.chr9.nic@CDK20 transcript1205.chr9.nic protein_coding 87974372,87973922,87971147,87969796,87969194,87964906 87974730,87974035,87971335,87970897,87969349,87967659 Gene ID= ENSG00000156345.17 TPM= 2.94 Transcript Type= NA chr9 87966441 87974685 87966441 87974685 - ENST00000459720.5@CDK20 ENST00000459720.5 protein_coding 87974372,87973922,87971147,87969194,87966441 87974685,87974035,87971335,87970897,87967659 Gene ID= ENSG00000156345.17 TPM= 3.85 Transcript Type= retained_intron chr9 87966634 87974752 87966634 87974752 - ENST00000325303.8@CDK20 ENST00000325303.8 protein_coding 87974372,87973922,87971147,87970776,87970568,87969796,87969194,87966634 87974752,87974035,87971335,87970897,87970630,87969919,87969349,87967659 Gene ID= ENSG00000156345.17 TPM= 16.3 Transcript Type= protein_coding chr9 88387643 88478692 88387643 88478692 + transcript1211.chr9.nnic@SPIN1 transcript1211.chr9.nnic protein_coding 88387643,88426382,88448941,88462496,88468372,88475078 88388266,88426591,88448989,88462749,88468605,88478692 Gene ID= ENSG00000106723.16 TPM= 1.81 Transcript Type= NA chr9 88388419 88478694 88388419 88478694 + ENST00000375859.3@SPIN1 ENST00000375859.3 protein_coding 88388419,88426382,88448941,88462496,88468372,88475078 88388538,88426591,88448989,88462749,88468605,88478694 Gene ID= ENSG00000106723.16 TPM= 40.75 Transcript Type= protein_coding chr9 88991447 89005010 88991447 89005010 + ENST00000358157.2@S1PR3 ENST00000358157.2 protein_coding 88991447,89001054 88991695,89005010 Gene ID= ENSG00000213694.3 TPM= 35.32 Transcript Type= protein_coding chr9 89010577 89180070 89010577 89180070 - transcript1220.chr9.nnic@SHC3 transcript1220.chr9.nnic protein_coding 89177987,89112556,89077840,89075109,89071199,89065529,89052037,89046844,89045736,89042026,89037993,89010577 89180070,89112626,89077903,89075228,89071252,89065580,89052163,89046994,89045833,89042186,89038288,89013575 Gene ID= ENSG00000148082.9 TPM= 7.24 Transcript Type= NA chr9 89005771 89178767 89005771 89178767 - ENST00000375835.8@SHC3 ENST00000375835.8 protein_coding 89177987,89112556,89077840,89075109,89071199,89065529,89052037,89046844,89045746,89042026,89037993,89005771 89178767,89112626,89077903,89075228,89071252,89065580,89052163,89046994,89045833,89042184,89038288,89013575 Gene ID= ENSG00000148082.9 TPM= 17.21 Transcript Type= protein_coding chr9 89088607 89180412 89088607 89180412 - transcript1223.chr9.nnic@AL353150.1 transcript1223.chr9.nnic sense_intronic 89177987,89112556,89109480,89109048,89088607 89180412,89112626,89109570,89109128,89088935 Gene ID= ENSG00000224945.1 TPM= 3.62 Transcript Type= NA chr9 89088607 89179337 89088607 89179337 - transcript1226.chr9.nnic@AL353150.1 transcript1226.chr9.nnic sense_intronic 89177987,89112556,89109480,89109048,89088607 89179337,89112626,89111570,89109128,89088935 Gene ID= ENSG00000224945.1 TPM= 7.24 Transcript Type= NA chr9 89088607 89180039 89088607 89180039 - transcript1228.chr9.nnic@AL353150.1 transcript1228.chr9.nnic sense_intronic 89177987,89112556,89109048,89088607 89180039,89112626,89109128,89088935 Gene ID= ENSG00000224945.1 TPM= 1.81 Transcript Type= NA chr9 89088607 89178723 89088607 89178723 - transcript1230.chr9.nic@AL353150.1 transcript1230.chr9.nic sense_intronic 89177987,89109048,89088607 89178723,89112626,89088935 Gene ID= ENSG00000224945.1 TPM= 3.62 Transcript Type= NA chr9 89088604 89109298 89088604 89109298 - ENST00000456944.1@AL353150.1 ENST00000456944.1 sense_intronic 89109048,89088604 89109298,89088935 Gene ID= ENSG00000224945.1 TPM= 1.81 Transcript Type= sense_intronic chr9 89311198 89316703 89311198 89316703 + ENST00000314355.6@CKS2 ENST00000314355.6 protein_coding 89311198,89315170,89316373 89311351,89315297,89316703 Gene ID= ENSG00000123975.4 TPM= 44.37 Transcript Type= protein_coding chr9 89318473 89359651 89318473 89359651 + transcript1236.chr9.nnic@SECISBP2 transcript1236.chr9.nnic protein_coding 89318473,89319652,89325427,89325897,89328660,89332908,89334636,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350711,89357565,89358191,89359651 Gene ID= ENSG00000187742.14 TPM= 2.2 Transcript Type= NA chr9 89318473 89359651 89318473 89359651 + transcript1237.chr9.nic@SECISBP2 transcript1237.chr9.nic protein_coding 89318473,89319652,89325427,89325897,89328660,89332908,89334636,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359651 Gene ID= ENSG00000187742.14 TPM= 15.18 Transcript Type= NA chr9 89318473 89359651 89318473 89359651 + transcript1239.chr9.nic@SECISBP2 transcript1239.chr9.nic protein_coding 89318473,89319652,89325548,89325897,89328660,89332908,89334636,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359651 Gene ID= ENSG00000187742.14 TPM= 2.5 Transcript Type= NA chr9 89318473 89359651 89318473 89359651 + transcript1245.chr9.nnic@SECISBP2 transcript1245.chr9.nnic protein_coding 89318473,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359651 Gene ID= ENSG00000187742.14 TPM= 2.5 Transcript Type= NA chr9 89318506 89359650 89318506 89359650 + ENST00000375807.7@SECISBP2 ENST00000375807.7 protein_coding 89318506,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359650 Gene ID= ENSG00000187742.14 TPM= 27.4 Transcript Type= protein_coding chr9 89318519 89359642 89318519 89359642 + ENST00000339901.8@SECISBP2 ENST00000339901.8 protein_coding 89318519,89319652,89325548,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89318612,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359642 Gene ID= ENSG00000187742.14 TPM= 7.93 Transcript Type= protein_coding chr9 89318851 89359662 89318851 89359662 + ENST00000534113.6@SECISBP2 ENST00000534113.6 protein_coding 89318851,89319652,89325427,89325897,89328660,89332908,89334522,89338458,89339864,89341347,89346882,89348079,89349776,89350632,89357411,89357999,89358721 89319067,89319797,89325676,89326038,89328886,89332986,89334730,89338580,89339953,89341479,89347048,89348214,89349929,89350852,89357565,89358191,89359662 Gene ID= ENSG00000187742.14 TPM= 2.05 Transcript Type= protein_coding chr9 89377391 89498089 89377391 89498089 - ENST00000422704.6@SEMA4D ENST00000422704.6 protein_coding 89497919,89455888,89405351,89402871,89399276,89396737,89393562,89392423,89391264,89388872,89388636,89387386,89386367,89381174,89381055,89377391 89498089,89455953,89405699,89403016,89399338,89396835,89393655,89392536,89391415,89389047,89388792,89387608,89386482,89381346,89381098,89379629 Gene ID= ENSG00000187764.11 TPM= 2.72 Transcript Type= protein_coding chr9 89599356 89604660 89599356 89604660 . transcript1262.chr9.nnic@NA transcript1262.chr9.nnic NA 89599356,89602740,89603949 89600815,89602861,89604660 Gene ID= novel_gene_chr9_1263 TPM= 2.72 Transcript Type= NA chr9 89604751 89606552 89604751 89606552 + transcript1260.chr9.nic@GADD45G transcript1260.chr9.nic protein_coding 89604751,89605432,89605758,89605969 89605174,89605533,89605880,89606552 Gene ID= ENSG00000130222.10 TPM= 10.41 Transcript Type= NA chr9 89605013 89606555 89605013 89606555 + ENST00000252506.10@GADD45G ENST00000252506.10 protein_coding 89605013,89605432,89605667,89605969 89605174,89605533,89605880,89606555 Gene ID= ENSG00000130222.10 TPM= 348.63 Transcript Type= protein_coding chr9 90801787 90898549 90801787 90898549 + ENST00000375754.8@SYK ENST00000375754.8 protein_coding 90801787,90843858,90845434,90862206,90864589,90865048,90867131,90874204,90874672,90877571,90878764,90887749,90888515,90895528 90801893,90844315,90845594,90862344,90864667,90865097,90867199,90874291,90874849,90877780,90878953,90887889,90888627,90898549 Gene ID= ENSG00000165025.14 TPM= 19.02 Transcript Type= protein_coding chr9 91213832 91361961 91213832 91361961 - transcript1279.chr9.nic@AUH transcript1279.chr9.nic protein_coding 91361628,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91213832 91361961,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91214425 Gene ID= ENSG00000148090.11 TPM= 6.34 Transcript Type= NA chr9 91290948 91361961 91290948 91361961 - transcript1283.chr9.nnic@AUH transcript1283.chr9.nnic protein_coding 91361628,91356088,91355883,91325318,91297984,91296021,91290948 91361961,91356155,91355970,91325404,91298076,91296077,91294797 Gene ID= ENSG00000148090.11 TPM= 13.58 Transcript Type= NA chr9 91213815 91361913 91213815 91361913 - ENST00000375731.8@AUH ENST00000375731.8 protein_coding 91361628,91356088,91355883,91325318,91297984,91296021,91220805,91217277,91216059,91213815 91361913,91356155,91355970,91325404,91298076,91296077,91220992,91217327,91216106,91214425 Gene ID= ENSG00000148090.11 TPM= 84.22 Transcript Type= protein_coding chr9 91213815 91361913 91213815 91361913 - ENST00000303617.5@AUH ENST00000303617.5 protein_coding 91361628,91356088,91355883,91297984,91296021,91220805,91217277,91216059,91213815 91361913,91356155,91355970,91298076,91296077,91220992,91217327,91216106,91214425 Gene ID= ENSG00000148090.11 TPM= 1.81 Transcript Type= protein_coding chr9 91409045 91423862 91409045 91423862 - ENST00000297689.3@NFIL3 ENST00000297689.3 protein_coding 91423640,91409045 91423862,91410906 Gene ID= ENSG00000165030.3 TPM= 113.19 Transcript Type= protein_coding chr9 91722597 91950283 91722597 91950283 - transcript1295.chr9.nnic@ROR2 transcript1295.chr9.nnic protein_coding 91949867,91775741,91757272,91756071,91737391,91733122,91730944,91726541,91722597 91950283,91775818,91757559,91756101,91737518,91733436,91731155,91726743,91725107 Gene ID= ENSG00000169071.14 TPM= 7.7 Transcript Type= NA chr9 91722597 91950162 91722597 91950162 - ENST00000375708.3@ROR2 ENST00000375708.3 protein_coding 91949867,91775741,91757272,91756071,91737391,91733122,91730910,91726541,91722597 91950162,91775818,91757559,91756101,91737518,91733436,91731155,91726743,91725107 Gene ID= ENSG00000169071.14 TPM= 31.24 Transcript Type= protein_coding chr9 92107176 92115388 92107176 92115388 - transcript1302.chr9.nic@SPTLC1 transcript1302.chr9.nic protein_coding 92115314,92112455,92108740,92107176 92115388,92112562,92108834,92108069 Gene ID= ENSG00000090054.13 TPM= 2.72 Transcript Type= NA chr9 92031999 92115376 92031999 92115376 - ENST00000262554.6@SPTLC1 ENST00000262554.6 protein_coding 92115314,92112455,92108740,92080870,92080016,92067966,92059179,92055405,92049960,92047613,92047172,92045999,92038248,92034810,92031999 92115376,92112562,92108834,92080963,92080088,92068098,92059308,92055494,92050067,92047708,92047268,92046053,92038365,92034883,92032558 Gene ID= ENSG00000090054.13 TPM= 1.81 Transcript Type= protein_coding chr9 92079061 92115383 92079061 92115383 - ENST00000337841.4@SPTLC1 ENST00000337841.4 protein_coding 92115314,92112455,92108740,92080870,92080016,92079061 92115383,92112562,92108834,92080963,92080088,92079566 Gene ID= ENSG00000090054.13 TPM= 1.81 Transcript Type= protein_coding chr9 92141298 92148306 92141298 92148306 + ENST00000367276.8@LINC00475 ENST00000367276.8 lincRNA 92141298,92147922 92141650,92148306 Gene ID= ENSG00000225511.6 TPM= 1.81 Transcript Type= lincRNA chr9 92210207 92293700 92210207 92293700 - ENST00000375643.7@IARS ENST00000375643.7 protein_coding 92293441,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210207 92293700,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889 Gene ID= ENSG00000196305.17 TPM= 23.54 Transcript Type= protein_coding chr9 92210345 92293694 92210345 92293694 - ENST00000443024.6@IARS ENST00000443024.6 protein_coding 92293611,92289301,92288126,92287791,92286536,92285722,92280746,92278199,92277863,92274426,92271533,92270985,92269885,92268174,92265480,92264929,92262969,92260151,92258854,92256680,92253362,92251808,92250713,92250187,92249858,92247377,92244959,92243216,92242154,92240856,92229001,92223346,92222520,92210873,92210345 92293694,92289426,92288282,92287910,92286618,92285839,92280893,92278286,92277923,92274521,92271655,92271076,92269983,92268300,92265553,92265123,92263055,92260234,92258998,92256800,92253453,92251885,92250834,92250289,92249941,92247551,92245071,92243311,92242330,92240961,92229126,92223489,92222672,92210889,92210871 Gene ID= ENSG00000196305.17 TPM= 54.63 Transcript Type= protein_coding chr9 92297306 92325348 92297306 92325348 - transcript1319.chr9.nic@NOL8 transcript1319.chr9.nic protein_coding 92325180,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297306 92325348,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886 Gene ID= ENSG00000198000.11 TPM= 7.24 Transcript Type= NA chr9 92297359 92325585 92297359 92325585 - transcript1321.chr9.nic@NOL8 transcript1321.chr9.nic protein_coding 92325318,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297359 92325585,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886 Gene ID= ENSG00000198000.11 TPM= 4.53 Transcript Type= NA chr9 92297485 92325627 92297485 92325627 - transcript1322.chr9.nic@NOL8 transcript1322.chr9.nic protein_coding 92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297485 92325627,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886 Gene ID= ENSG00000198000.11 TPM= 1.81 Transcript Type= NA chr9 92297358 92325556 92297358 92325556 - ENST00000442668.6@NOL8 ENST00000442668.6 protein_coding 92325306,92324023,92323441,92321668,92319221,92318618,92314267,92311146,92310553,92310171,92306886,92305753,92301551,92299890,92298884,92298257,92297358 92325556,92324209,92323503,92321746,92319356,92318686,92316138,92311259,92310675,92310261,92307024,92305830,92301822,92300016,92298954,92298336,92297886 Gene ID= ENSG00000198000.11 TPM= 17.21 Transcript Type= protein_coding chr9 92456205 92482506 92456205 92482506 - ENST00000375544.7@ASPN ENST00000375544.7 protein_coding 92482293,92474624,92470669,92466358,92464919,92460474,92459632,92456205 92482506,92474927,92470781,92466571,92465029,92460567,92459770,92457485 Gene ID= ENSG00000106819.11 TPM= 7.24 Transcript Type= protein_coding chr9 92495317 92536068 92495317 92536068 - transcript1328.chr9.nic@ECM2 transcript1328.chr9.nic protein_coding 92535933,92522575,92517687,92514631,92512011,92509899,92505533,92502513,92500727,92495317 92536068,92522893,92517875,92515137,92512126,92510034,92505690,92502652,92501053,92496483 Gene ID= ENSG00000106823.12 TPM= 1.81 Transcript Type= NA chr9 92495312 92536055 92495312 92536055 - ENST00000344604.9@ECM2 ENST00000344604.9 protein_coding 92535933,92522575,92517687,92514631,92512011,92509899,92505533,92502513,92500727,92495312 92536055,92522893,92517875,92515203,92512126,92510034,92505690,92502652,92501053,92496483 Gene ID= ENSG00000106823.12 TPM= 2.72 Transcript Type= protein_coding chr9 92614563 92670113 92614563 92670113 - transcript1335.chr9.nic@IPPK transcript1335.chr9.nic protein_coding 92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92638001,92635158,92634386,92619486,92614563 92670113,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280,92635246,92634488,92619565,92616057 Gene ID= ENSG00000127080.9 TPM= 2.26 Transcript Type= NA chr9 92613184 92670265 92613184 92670265 - ENST00000287996.7@IPPK ENST00000287996.7 protein_coding 92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92638001,92635158,92634386,92619486,92613184 92670265,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280,92635308,92634488,92619565,92616057 Gene ID= ENSG00000127080.9 TPM= 9.51 Transcript Type= protein_coding chr9 92635727 92670174 92635727 92670174 - transcript1338.chr9.nic@IPPK transcript1338.chr9.nic protein_coding 92669908,92658634,92656456,92652573,92649453,92648059,92642752,92640710,92635727 92670174,92658681,92656551,92652639,92649574,92648148,92642810,92640782,92638280 Gene ID= ENSG00000127080.9 TPM= 2.72 Transcript Type= NA chr9 92711363 92764812 92711363 92764812 - ENST00000375512.3@BICD2 ENST00000375512.3 protein_coding 92764505,92729024,92722656,92720300,92718539,92717797,92715253,92711363 92764812,92729236,92722808,92720755,92719582,92717948,92715463,92713461 Gene ID= ENSG00000185963.13 TPM= 43.47 Transcript Type= protein_coding chr9 92711363 92764812 92711363 92764812 - ENST00000356884.10@BICD2 ENST00000356884.10 protein_coding 92764505,92729024,92722656,92720300,92718539,92717797,92711363 92764812,92729236,92722808,92720755,92719582,92717948,92715463 Gene ID= ENSG00000185963.13 TPM= 9.06 Transcript Type= protein_coding chr9 93058707 93085138 93058707 93085138 + ENST00000375472.7@SUSD3 ENST00000375472.7 protein_coding 93058707,93075784,93077846,93079471,93084537 93058830,93075972,93077993,93079602,93085138 Gene ID= ENSG00000157303.10 TPM= 1.81 Transcript Type= protein_coding chr9 93096246 93113284 93096246 93113284 + transcript1357.chr9.nic@CARD19 transcript1357.chr9.nic protein_coding 93096246,93107674,93110568,93111879,93112992 93096352,93107816,93110721,93112289,93113284 Gene ID= ENSG00000165233.17 TPM= 1.81 Transcript Type= NA chr9 93096158 93113284 93096158 93113284 + transcript1360.chr9.nic@CARD19 transcript1360.chr9.nic protein_coding 93096158,93107674,93110568,93112218,93112992 93096352,93107827,93110721,93112289,93113284 Gene ID= ENSG00000165233.17 TPM= 2.72 Transcript Type= NA chr9 93096238 93113284 93096238 93113284 + transcript1362.chr9.nic@CARD19 transcript1362.chr9.nic protein_coding 93096238,93107674,93110568,93112992 93096352,93107827,93112289,93113284 Gene ID= ENSG00000165233.17 TPM= 1.81 Transcript Type= NA chr9 93096218 93113282 93096218 93113282 + ENST00000375464.6@CARD19 ENST00000375464.6 protein_coding 93096218,93107674,93110568,93111879,93112218,93112992 93096352,93107816,93110721,93111938,93112289,93113282 Gene ID= ENSG00000165233.17 TPM= 30.79 Transcript Type= protein_coding chr9 93096218 93113282 93096218 93113282 + ENST00000466409.1@CARD19 ENST00000466409.1 protein_coding 93096218,93107674,93110568,93112992 93096352,93107816,93112289,93113282 Gene ID= ENSG00000165233.17 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr9 93096315 93113272 93096315 93113272 + ENST00000490488.5@CARD19 ENST00000490488.5 protein_coding 93096315,93107674,93110568,93111879,93112218,93112992 93096352,93107827,93110721,93111938,93112289,93113272 Gene ID= ENSG00000165233.17 TPM= 1.81 Transcript Type= processed_transcript chr9 93121489 93134288 93121489 93134288 - ENST00000375446.4@NINJ1 ENST00000375446.4 protein_coding 93134143,93126410,93124899,93121489 93134288,93126638,93125062,93122230 Gene ID= ENSG00000131669.9 TPM= 342.3 Transcript Type= protein_coding chr9 93445608 93451595 93445608 93451595 - transcript1395.chr9.nnic@FAM120AOS transcript1395.chr9.nnic protein_coding 93451088,93450479,93445608 93451595,93450587,93447697 Gene ID= ENSG00000188938.15 TPM= 2.72 Transcript Type= NA chr9 93445608 93451553 93445608 93451553 - transcript1397.chr9.nnic@FAM120AOS transcript1397.chr9.nnic protein_coding 93451001,93450479,93445608 93451553,93450599,93447697 Gene ID= ENSG00000188938.15 TPM= 2.72 Transcript Type= NA chr9 93446494 93451562 93446494 93451562 - ENST00000423591.5@FAM120AOS ENST00000423591.5 protein_coding 93451088,93450479,93446494 93451562,93450599,93447697 Gene ID= ENSG00000188938.15 TPM= 35.32 Transcript Type= protein_coding chr9 93446494 93451524 93446494 93451524 - ENST00000479094.5@FAM120AOS ENST00000479094.5 protein_coding 93450945,93450479,93446494 93451524,93450599,93447697 Gene ID= ENSG00000188938.15 TPM= 4.53 Transcript Type= processed_transcript chr9 93446494 93453592 93446494 93453592 - ENST00000375412.9@FAM120AOS ENST00000375412.9 protein_coding 93452147,93450479,93446494 93453592,93450599,93447697 Gene ID= ENSG00000188938.15 TPM= 2.72 Transcript Type= protein_coding chr9 93451722 93566107 93451722 93566107 + ENST00000277165.10@FAM120A ENST00000277165.10 protein_coding 93451722,93471141,93476256,93497471,93498790,93515667,93515983,93527155,93529353,93532155,93543222,93550577,93556382,93557827,93558581,93561109,93562208,93564229 93452389,93471387,93476338,93497599,93498886,93515767,93516269,93527242,93529580,93532329,93543471,93550691,93556591,93558010,93558718,93561250,93562304,93566107 Gene ID= ENSG00000048828.16 TPM= 57.05 Transcript Type= protein_coding chr9 93576407 93679587 93576407 93679587 + ENST00000359246.8@PHF2 ENST00000359246.8 protein_coding 93576407,93629970,93636411,93645629,93649071,93653179,93654413,93655934,93656489,93658145,93659511,93660192,93662907,93663517,93665686,93665990,93667080,93673585,93674927,93675680,93676594,93677588 93576871,93630055,93636525,93645789,93649212,93653365,93654575,93656021,93656595,93658236,93659600,93660560,93663026,93663635,93665864,93666060,93667240,93673862,93675022,93675789,93676963,93679587 Gene ID= ENSG00000197724.10 TPM= 14.49 Transcript Type= protein_coding chr9 94030794 94109856 94030794 94109856 + ENST00000375360.7@PTPDC1 ENST00000375360.7 protein_coding 94030794,94064734,94085251,94087831,94088145,94095317,94097321,94101566,94104275,94107828 94031127,94064821,94085422,94087911,94088263,94095454,94098579,94101751,94104385,94109856 Gene ID= ENSG00000158079.14 TPM= 7.24 Transcript Type= protein_coding chr9 94374536 94460919 94374536 94460919 + transcript1418.chr9.nnic@MFSD14B transcript1418.chr9.nnic protein_coding 94374536,94415158,94429189,94431032,94438401,94440985,94444964,94446823,94451456,94453958,94456240,94458322,94459161 94374927,94415253,94429251,94431130,94438528,94441099,94445182,94446936,94451527,94454070,94456337,94458464,94460919 Gene ID= ENSG00000148110.15 TPM= 6.04 Transcript Type= NA chr9 94374436 94460919 94374436 94460919 + transcript1427.chr9.nnic@MFSD14B transcript1427.chr9.nnic protein_coding 94374436,94415158,94429189,94438401,94444964,94446823,94451456,94453958,94456240,94458322,94459161 94374927,94415253,94429251,94438528,94445182,94446936,94451527,94454070,94456337,94458464,94460919 Gene ID= ENSG00000148110.15 TPM= 10.57 Transcript Type= NA chr9 94603141 94639793 94603141 94639793 - transcript1436.chr9.nnic@FBP1 transcript1436.chr9.nnic protein_coding 94639141,94620329,94617768,94609921,94605457,94603141 94639793,94620491,94617860,94610061,94605576,94603572 Gene ID= ENSG00000165140.9 TPM= 5.89 Transcript Type= NA chr9 94603133 94639507 94603133 94639507 - ENST00000375326.8@FBP1 ENST00000375326.8 protein_coding 94639141,94620329,94617768,94609921,94606815,94605457,94603133 94639507,94620491,94617860,94610061,94606952,94605576,94603572 Gene ID= ENSG00000165140.9 TPM= 42.11 Transcript Type= protein_coding chr9 94726634 95087234 94726634 95087234 + transcript1437.chr9.nic@C9orf3 transcript1437.chr9.nic protein_coding 94726634,94759649,94773002,94792765,94800757,94923986,94928425,94955177,94955908,94967758,94979367,95005158,95005542,95060694,95080694,95082575,95086682 94726751,94760580,94773168,94792918,94801002,94924175,94928531,94955279,94956015,94967801,94979427,95005220,95005616,95060810,95080780,95082719,95087234 Gene ID= ENSG00000148120.16 TPM= 2.72 Transcript Type= NA chr9 95003984 95087157 95003984 95087157 + transcript1446.chr9.nic@C9orf3 transcript1446.chr9.nic protein_coding 95003984,95005158,95005542,95060694,95080694,95082575,95086682 95004286,95005220,95005616,95060810,95080780,95082719,95087157 Gene ID= ENSG00000148120.16 TPM= 3.62 Transcript Type= NA chr9 95004952 95087160 95004952 95087160 + transcript1449.chr9.nnic@C9orf3 transcript1449.chr9.nnic protein_coding 95004952,95005158,95005542,95060694,95080694,95080972,95086682 95005065,95005220,95005616,95060810,95080780,95082719,95087160 Gene ID= ENSG00000148120.16 TPM= 1.81 Transcript Type= NA chr9 95004952 95087234 95004952 95087234 + transcript1450.chr9.nic@C9orf3 transcript1450.chr9.nic protein_coding 95004952,95005158,95005542,95060694,95080694,95082575,95086682 95005065,95005220,95005616,95060810,95080780,95082719,95087234 Gene ID= ENSG00000148120.16 TPM= 19.02 Transcript Type= NA chr9 95004952 95087160 95004952 95087160 + transcript1451.chr9.nic@C9orf3 transcript1451.chr9.nic protein_coding 95004952,95005158,95005542,95060694,95080694,95085930,95086682 95005065,95005220,95005616,95060810,95082719,95086119,95087160 Gene ID= ENSG00000148120.16 TPM= 1.81 Transcript Type= NA chr9 95004204 95084333 95004204 95084333 + transcript1454.chr9.nic@C9orf3 transcript1454.chr9.nic protein_coding 95004204,95005158,95005542,95060694,95080694,95082575 95004286,95005220,95005616,95060810,95080780,95084333 Gene ID= ENSG00000148120.16 TPM= 2.72 Transcript Type= NA chr9 95004203 95087216 95004203 95087216 + transcript1455.chr9.nic@C9orf3 transcript1455.chr9.nic protein_coding 95004203,95005158,95005542,95060694,95080694,95086682 95004286,95005220,95005616,95060810,95080780,95087216 Gene ID= ENSG00000148120.16 TPM= 2.72 Transcript Type= NA chr9 95004952 95087234 95004952 95087234 + transcript1459.chr9.nic@C9orf3 transcript1459.chr9.nic protein_coding 95004952,95005158,95005542,95060694,95080694,95086682 95005065,95005220,95005616,95060810,95082719,95087234 Gene ID= ENSG00000148120.16 TPM= 6.34 Transcript Type= NA chr9 95005224 95087234 95005224 95087234 + transcript1460.chr9.nnic@C9orf3 transcript1460.chr9.nnic protein_coding 95005224,95005542,95060694,95080694,95082575,95086682 95005383,95005616,95060810,95080780,95082719,95087234 Gene ID= ENSG00000148120.16 TPM= 1.81 Transcript Type= NA chr9 95048493 95087158 95048493 95087158 + transcript1462.chr9.nic@C9orf3 transcript1462.chr9.nic protein_coding 95048493,95060694,95080694,95082575,95086682 95049055,95060810,95080780,95082719,95087158 Gene ID= ENSG00000148120.16 TPM= 1.81 Transcript Type= NA chr9 95004952 95022284 95004952 95022284 + transcript1466.chr9.nic@C9orf3 transcript1466.chr9.nic protein_coding 95004952,95005158,95005542,95019450 95005065,95005220,95005616,95022284 Gene ID= ENSG00000148120.16 TPM= 6.34 Transcript Type= NA chr9 94726712 95087159 94726712 95087159 + ENST00000297979.9@C9orf3 ENST00000297979.9 protein_coding 94726712,94759649,94773002,94792765,94800757,94955177,94955908,94967758,94979367,95005158,95005542,95060694,95080694,95082575,95086682 94726751,94760580,94773168,94792918,94801002,94955279,94956015,94967801,94979427,95005220,95005616,95060810,95080780,95082719,95087159 Gene ID= ENSG00000148120.16 TPM= 1.81 Transcript Type= protein_coding chr9 95875616 96014566 95875616 96014566 + transcript1475.chr9.nic@ERCC6L2 transcript1475.chr9.nic protein_coding 95875616,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95954728,95955914,95966562,95970576,95971933,95978061,96004520,96012225 95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95954922,95956013,95966714,95970656,95973088,95978215,96004701,96014566 Gene ID= ENSG00000182150.15 TPM= 1.81 Transcript Type= NA chr9 95875616 96014566 95875616 96014566 + transcript1478.chr9.nic@ERCC6L2 transcript1478.chr9.nic protein_coding 95875616,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95955914,95966562,95970576,95971933,95978061,96004520,96012225 95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95956013,95966714,95970656,95973088,95978215,96004701,96014566 Gene ID= ENSG00000182150.15 TPM= 1.81 Transcript Type= NA chr9 95875684 96018440 95875684 96018440 + transcript1479.chr9.nnic@ERCC6L2 transcript1479.chr9.nnic protein_coding 95875684,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95955914,95966562,95970576,95971933,95978061,96004520,96016942 95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95956013,95966714,95970656,95973088,95978215,96004701,96018440 Gene ID= ENSG00000182150.15 TPM= 2.26 Transcript Type= NA chr9 95875616 96004856 95875616 96004856 + transcript1481.chr9.nic@ERCC6L2 transcript1481.chr9.nic protein_coding 95875616,95880869,95897849,95907078,95915668,95916227,95921175,95922305,95923260,95928079,95928719,95941454,95955914,95966562,95970576,95971933,95978061,96004520 95876084,95881293,95897971,95907271,95915829,95916434,95921315,95922418,95923379,95928150,95928864,95941549,95956013,95966714,95970656,95973088,95978215,96004856 Gene ID= ENSG00000182150.15 TPM= 2.26 Transcript Type= NA chr9 96320700 96383701 96320700 96383701 - transcript1489.chr9.nic@SLC35D2 transcript1489.chr9.nic protein_coding 96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96336717,96324091,96320700 96383701,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96336784,96324169,96321341 Gene ID= ENSG00000130958.11 TPM= 1.81 Transcript Type= NA chr9 96320707 96383857 96320707 96383857 - transcript1490.chr9.nnic@SLC35D2 transcript1490.chr9.nnic protein_coding 96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96324091,96321998,96320707 96383857,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96324169,96322080,96321341 Gene ID= ENSG00000130958.11 TPM= 1.81 Transcript Type= NA chr9 96351209 96383681 96351209 96383681 - transcript1495.chr9.nic@SLC35D2 transcript1495.chr9.nic protein_coding 96383477,96368272,96364464,96360154,96351209 96383681,96368305,96364550,96360221,96352109 Gene ID= ENSG00000130958.11 TPM= 1.81 Transcript Type= NA chr9 96320706 96383697 96320706 96383697 - ENST00000253270.11@SLC35D2 ENST00000253270.11 protein_coding 96383477,96368272,96364464,96360154,96352038,96351103,96345299,96343904,96336717,96324091,96321998,96320706 96383697,96368305,96364550,96360221,96352109,96351171,96345401,96343996,96336784,96324169,96322080,96321341 Gene ID= ENSG00000130958.11 TPM= 16.3 Transcript Type= protein_coding chr9 96385941 96418329 96385941 96418329 - ENST00000375256.4@ZNF367 ENST00000375256.4 protein_coding 96417613,96398164,96394823,96392398,96385941 96418329,96398314,96394942,96392536,96388459 Gene ID= ENSG00000165244.6 TPM= 2.72 Transcript Type= protein_coding chr9 96450205 96491336 96450205 96491336 + ENST00000375249.4@HABP4 ENST00000375249.4 protein_coding 96450205,96458379,96465337,96465710,96471011,96484462,96488089,96489982 96450628,96458541,96465498,96465778,96471094,96484633,96488274,96491336 Gene ID= ENSG00000130956.13 TPM= 28.07 Transcript Type= protein_coding chr9 96500113 96619830 96500113 96619830 - ENST00000375241.5@CDC14B ENST00000375241.5 protein_coding 96619219,96565393,96564777,96562693,96551796,96541826,96539078,96534455,96533927,96523587,96523261,96522506,96509673,96500113 96619830,96565483,96564852,96562785,96551872,96541892,96539140,96534542,96534157,96523725,96523420,96522603,96509789,96503789 Gene ID= ENSG00000081377.16 TPM= 4.53 Transcript Type= protein_coding chr9 96942912 97013703 96942912 97013703 - transcript1512.chr9.nnic@MFSD14C transcript1512.chr9.nnic protein_coding 97013259,96972853,96958835,96949555,96946103,96942912 97013703,96972948,96958897,96949682,96946221,96944085 Gene ID= ENSG00000196312.12 TPM= 2.26 Transcript Type= NA chr9 96942912 97013703 96942912 97013703 - transcript1513.chr9.nnic@MFSD14C transcript1513.chr9.nnic protein_coding 97013259,96972853,96958835,96949555,96946103,96942912 97013703,96972948,96958897,96949682,96946356,96944085 Gene ID= ENSG00000196312.12 TPM= 4.07 Transcript Type= NA chr9 97412174 97496122 97412174 97496122 + transcript1524.chr9.nnic@TDRD7 transcript1524.chr9.nnic protein_coding 97412174,97428460,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663 97412238,97428672,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478635,97480938,97483351,97487332,97496122 Gene ID= ENSG00000196116.7 TPM= 1.81 Transcript Type= NA chr9 97412083 97496122 97412083 97496122 + transcript1528.chr9.nnic@TDRD7 transcript1528.chr9.nnic protein_coding 97412083,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663 97412238,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496122 Gene ID= ENSG00000196116.7 TPM= 1.81 Transcript Type= NA chr9 97411950 97496125 97411950 97496125 + ENST00000355295.4@TDRD7 ENST00000355295.4 protein_coding 97411950,97428460,97430933,97432025,97439245,97441658,97460178,97464842,97470558,97472293,97473492,97475383,97478439,97480828,97482849,97487172,97495663 97412238,97428672,97431074,97432238,97439318,97441875,97460764,97465028,97470669,97472495,97473626,97475469,97478573,97480938,97483351,97487332,97496125 Gene ID= ENSG00000196116.7 TPM= 21.73 Transcript Type= protein_coding chr9 97501628 97601764 97501628 97601764 + transcript1544.chr9.nnic@TMOD1 transcript1544.chr9.nnic protein_coding 97501628,97524141,97553281,97562732,97564038,97565848,97568894,97591291,97599634 97501803,97524308,97553400,97562821,97564168,97565955,97569037,97591435,97601764 Gene ID= ENSG00000136842.13 TPM= 7.02 Transcript Type= NA chr9 97501639 97601748 97501639 97601748 + ENST00000259365.8@TMOD1 ENST00000259365.8 protein_coding 97501639,97524141,97546185,97553281,97562732,97564038,97565848,97568894,97591291,97599634 97501803,97524308,97546341,97553400,97562821,97564168,97565955,97569037,97591435,97601748 Gene ID= ENSG00000136842.13 TPM= 194.47 Transcript Type= protein_coding chr9 97600083 97633575 97600083 97633575 - ENST00000341170.4@TSTD2 ENST00000341170.4 protein_coding 97633243,97627398,97625681,97617757,97611574,97610346,97606143,97605483,97604727,97600083 97633575,97627612,97625997,97617877,97611699,97610451,97606261,97605641,97604865,97602767 Gene ID= ENSG00000136925.14 TPM= 24.22 Transcript Type= protein_coding chr9 97633626 97673748 97633626 97673748 + ENST00000375147.7@NCBP1 ENST00000375147.7 protein_coding 97633626,97640794,97641562,97643204,97645117,97645611,97647492,97648008,97650503,97651310,97653798,97654880,97655702,97656011,97658640,97660946,97662042,97662954,97664340,97666763,97668846,97669593,97671086 97633915,97640882,97641662,97643360,97645224,97645732,97647561,97648223,97650600,97651373,97653908,97654944,97655764,97656085,97658743,97661068,97662144,97663047,97664443,97666877,97668974,97669706,97673748 Gene ID= ENSG00000136937.12 TPM= 16.3 Transcript Type= protein_coding chr9 97674248 97697325 97674248 97697325 - transcript1552.chr9.nic@XPA transcript1552.chr9.nic protein_coding 97697224,97693649,97689534,97687096,97684923,97674248 97697325,97693759,97689639,97687261,97685040,97675587 Gene ID= ENSG00000136936.10 TPM= 1.81 Transcript Type= NA chr9 97674909 97697357 97674909 97697357 - ENST00000375128.4@XPA ENST00000375128.4 protein_coding 97697121,97693649,97689534,97687096,97684923,97674909 97697357,97693759,97689639,97687261,97685040,97675587 Gene ID= ENSG00000136936.10 TPM= 21.73 Transcript Type= protein_coding chr9 97904490 97922529 97904490 97922529 - transcript1554.chr9.nic@TRMO transcript1554.chr9.nic protein_coding 97922418,97916164,97913401,97912873,97909960,97904490 97922529,97916338,97913558,97912975,97910616,97904992 Gene ID= ENSG00000136932.13 TPM= 4.83 Transcript Type= NA chr9 97904489 97922570 97904489 97922570 - ENST00000375119.7@TRMO ENST00000375119.7 protein_coding 97922418,97916164,97913401,97909960,97904489 97922570,97916338,97913558,97910616,97904992 Gene ID= ENSG00000136932.13 TPM= 5.73 Transcript Type= protein_coding chr9 97904490 97922511 97904490 97922511 - transcript1556.chr9.nic@TRMO transcript1556.chr9.nic protein_coding 97922418,97913401,97909960,97904490 97922511,97913558,97910616,97904992 Gene ID= ENSG00000136932.13 TPM= 2.11 Transcript Type= NA chr9 97983361 98015943 97983361 98015943 + ENST00000339399.4@ANP32B ENST00000339399.4 protein_coding 97983361,97994631,97998556,98004964,98011271,98012421,98015364 97983609,97994780,97998678,98005153,98011389,98012472,98015943 Gene ID= ENSG00000136938.8 TPM= 80.59 Transcript Type= protein_coding chr9 98056739 98083075 98056739 98083075 + ENST00000210444.5@NANS ENST00000210444.5 protein_coding 98056739,98060782,98076918,98078193,98080816,98082846 98056940,98060997,98077017,98078347,98081082,98083075 Gene ID= ENSG00000095380.10 TPM= 32.6 Transcript Type= protein_coding chr9 98084355 98119198 98084355 98119198 - ENST00000341469.6@TRIM14 ENST00000341469.6 protein_coding 98118982,98109889,98099931,98094867,98091909,98084355 98119198,98109984,98100164,98095029,98092001,98088005 Gene ID= ENSG00000106785.14 TPM= 3.62 Transcript Type= protein_coding chr9 98199006 98255727 98199006 98255727 - transcript1570.chr9.nnic@TBC1D2 transcript1570.chr9.nnic protein_coding 98255173,98251785,98246199,98243994,98233416,98228952,98220833,98213108,98210656,98208668,98203288,98201479,98200253,98199006 98255727,98251926,98246282,98244129,98233549,98229148,98221228,98213218,98210843,98209144,98203408,98201664,98200374,98199588 Gene ID= ENSG00000095383.19 TPM= 4.23 Transcript Type= NA chr9 98199042 98255610 98199042 98255610 - transcript1573.chr9.nnic@TBC1D2 transcript1573.chr9.nnic protein_coding 98255173,98251785,98243994,98233416,98228952,98220833,98213108,98210656,98208668,98203288,98201479,98200253,98199042 98255610,98251926,98244129,98233549,98229148,98221228,98213218,98210843,98209144,98203408,98201664,98200374,98199536 Gene ID= ENSG00000095383.19 TPM= 2.42 Transcript Type= NA chr9 98199029 98255590 98199029 98255590 - ENST00000342112.9@TBC1D2 ENST00000342112.9 protein_coding 98255173,98243994,98233416,98228952,98220833,98213108,98210656,98208668,98203288,98201479,98200253,98199029 98255590,98244129,98233549,98229148,98221228,98213218,98210843,98209144,98203408,98201664,98200374,98199588 Gene ID= ENSG00000095383.19 TPM= 3.32 Transcript Type= protein_coding chr9 98288082 98709197 98288082 98709197 - ENST00000259455.3@GABBR2 ENST00000259455.3 protein_coding 98708417,98577935,98541873,98496413,98480932,98473146,98453981,98406081,98394175,98388854,98385640,98371464,98362715,98311095,98306121,98303241,98299224,98293785,98288082 98709197,98578072,98542043,98496514,98480997,98473346,98454217,98406141,98394255,98389004,98385772,98371571,98362837,98311205,98306345,98303423,98299353,98293902,98290749 Gene ID= ENSG00000136928.6 TPM= 18.11 Transcript Type= protein_coding chr9 98732011 98796551 98732011 98796551 - transcript1581.chr9.nic@ANKS6 transcript1581.chr9.nic protein_coding 98796133,98790104,98784832,98783953,98782467,98780189,98778226,98777405,98773877,98770896,98768081,98756420,98751029,98745559,98736527,98732011 98796551,98790606,98784876,98784157,98782573,98780337,98778424,98777454,98774080,98771046,98768250,98756603,98751096,98745675,98736623,98732553 Gene ID= ENSG00000165138.17 TPM= 2.72 Transcript Type= NA chr9 98783571 98796551 98783571 98796551 - transcript1590.chr9.nic@ANKS6 transcript1590.chr9.nic protein_coding 98796133,98790104,98784832,98783571 98796551,98790606,98784876,98784157 Gene ID= ENSG00000165138.17 TPM= 3.62 Transcript Type= NA chr9 98732019 98796539 98732019 98796539 - ENST00000353234.4@ANKS6 ENST00000353234.4 protein_coding 98796133,98790104,98784832,98783953,98782467,98780189,98778226,98777405,98773877,98770896,98768081,98756420,98751029,98745559,98732019 98796539,98790606,98784876,98784157,98782573,98780337,98778424,98777454,98774080,98771046,98768250,98756603,98751096,98745675,98736623 Gene ID= ENSG00000165138.17 TPM= 2.72 Transcript Type= protein_coding chr9 98807699 98850081 98807699 98850081 + ENST00000375011.3@GALNT12 ENST00000375011.3 protein_coding 98807699,98823256,98826752,98831772,98835249,98836972,98840002,98844096,98845977,98848952 98808069,98823425,98826941,98831957,98835366,98837148,98840133,98844209,98846123,98850081 Gene ID= ENSG00000119514.6 TPM= 11.77 Transcript Type= protein_coding chr9 98943484 99071143 98943484 99071143 + transcript1601.chr9.nnic@COL15A1 transcript1601.chr9.nnic protein_coding 98943484,98943955,98944162,98985565,98987294,98989178,98996934,99000839,99003453,99004898,99015417,99015976,99020389,99022091,99023357,99024874,99025904,99034549,99035014,99035350,99036170,99036313,99038668,99040521,99042045,99044568,99044735,99047786,99047941,99049690,99049854,99052388,99054576,99055102,99055262,99056260,99059889,99061971,99062245,99063050,99066882,99068555,99069673 98943628,98944072,98944250,98986112,98987368,98989258,98997081,99000951,99003587,99005050,99015566,99016119,99020442,99022150,99023449,99024999,99025966,99034584,99035154,99035418,99036205,99036396,99038733,99040556,99042107,99044636,99044770,99047839,99048000,99049758,99049895,99052433,99054656,99055151,99055372,99056404,99059953,99062099,99062304,99063109,99067067,99068670,99071143 Gene ID= ENSG00000204291.10 TPM= 48.49 Transcript Type= NA chr9 98943458 99041389 98943458 99041389 + transcript1624.chr9.nic@COL15A1 transcript1624.chr9.nic protein_coding 98943458,98944162,98985565,98987294,98989178,98996934,99000839,99003453,99004898,99015417,99015976,99020389,99022091,99023357,99024874,99025904,99034549,99035014,99035350,99036170,99036313,99038668,99040521,99040704 98944072,98944250,98986112,98987368,98989258,98997081,99000951,99003587,99005050,99015566,99016119,99020442,99022150,99023449,99024999,99025966,99034584,99035154,99035418,99036205,99036396,99038733,99040556,99041389 Gene ID= ENSG00000204291.10 TPM= 52.02 Transcript Type= NA chr9 98943639 99070792 98943639 99070792 + ENST00000375001.7@COL15A1 ENST00000375001.7 protein_coding 98943639,98944162,98985565,98987294,98989178,98996934,99000839,99003453,99004898,99015417,99015976,99020389,99022091,99023357,99024874,99025904,99034549,99035014,99035350,99036170,99036313,99038668,99040521,99042045,99044568,99044735,99047786,99047941,99049690,99049854,99052388,99054576,99055102,99055262,99056260,99059889,99061971,99062245,99063050,99066882,99068555,99069673 98944072,98944250,98986112,98987368,98989258,98997081,99000951,99003587,99005050,99015566,99016119,99020442,99022150,99023449,99024999,99025966,99034584,99035154,99035418,99036205,99036396,99038733,99040556,99042107,99044636,99044770,99047839,99048000,99049758,99049895,99052433,99054656,99055151,99055372,99056404,99059953,99062099,99062304,99063109,99067067,99068670,99070792 Gene ID= ENSG00000204291.10 TPM= 281.14 Transcript Type= protein_coding chr9 99105089 99154192 99105089 99154192 + ENST00000374994.8@TGFBR1 ENST00000374994.8 protein_coding 99105089,99128855,99132509,99137859,99142536,99144732,99146485,99147654,99149180 99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99154192 Gene ID= ENSG00000106799.12 TPM= 24 Transcript Type= protein_coding chr9 99105150 99153658 99105150 99153658 + ENST00000552516.5@TGFBR1 ENST00000552516.5 protein_coding 99105150,99128855,99132497,99137859,99142536,99144732,99146485,99147654,99149180 99105302,99129100,99132739,99138089,99142703,99144888,99146609,99147784,99153658 Gene ID= ENSG00000106799.12 TPM= 3.17 Transcript Type= protein_coding chr9 99216426 99221942 99216426 99221942 - ENST00000238477.5@ALG2 ENST00000238477.5 protein_coding 99221547,99220979,99216426 99221942,99221137,99218836 Gene ID= ENSG00000119523.9 TPM= 18.11 Transcript Type= nonsense_mediated_decay chr9 99217367 99221956 99217367 99221956 - ENST00000476832.1@ALG2 ENST00000476832.1 protein_coding 99221547,99217367 99221956,99218836 Gene ID= ENSG00000119523.9 TPM= 55.24 Transcript Type= protein_coding chr9 99222301 99230615 99222301 99230615 + ENST00000223641.4@SEC61B ENST00000223641.4 protein_coding 99222301,99222546,99227899,99230337 99222366,99222643,99228000,99230615 Gene ID= ENSG00000106803.9 TPM= 139.45 Transcript Type= protein_coding chr9 99906633 99970341 99906633 99970341 + ENST00000259400.10@STX17 ENST00000259400.10 protein_coding 99906633,99915178,99928778,99951060,99959917,99960105,99967653,99968434 99906706,99915362,99928843,99951285,99960032,99960155,99967739,99970341 Gene ID= ENSG00000136874.10 TPM= 8.15 Transcript Type= protein_coding chr9 100099199 100302174 100099199 100302174 + transcript1654.chr9.nic@INVS transcript1654.chr9.nic protein_coding 100099199,100104498,100126383,100215401,100226062,100229660,100240060,100242570,100246616,100252283,100252907,100264822,100272864,100284320,100292326,100292947,100296917,100297936,100300568 100099416,100104627,100126549,100215488,100226235,100229827,100240240,100242679,100246787,100252438,100253136,100264928,100273076,100284603,100292436,100293043,100297146,100298010,100302174 Gene ID= ENSG00000119509.12 TPM= 2.72 Transcript Type= NA chr9 100099275 100300788 100099275 100300788 + ENST00000262456.6@INVS ENST00000262456.6 protein_coding 100099275,100104498,100126383,100226062,100229660,100240060,100242570,100246616,100252283,100252907,100264822,100272864,100284320,100292326,100292947,100296917,100297936,100300568 100099416,100104627,100126549,100226235,100229827,100240240,100242679,100246787,100252438,100253136,100264928,100273076,100284603,100292436,100293043,100297146,100298010,100300788 Gene ID= ENSG00000119509.12 TPM= 3.62 Transcript Type= protein_coding chr9 100302080 100352963 100302080 100352963 - transcript1661.chr9.nic@TEX10 transcript1661.chr9.nic protein_coding 100352772,100349184,100347167,100346072,100340257,100329931,100329140,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302080 100352963,100349372,100347406,100346315,100340369,100330169,100329275,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304 Gene ID= ENSG00000136891.13 TPM= 1.81 Transcript Type= NA chr9 100302084 100352939 100302084 100352939 - ENST00000374902.8@TEX10 ENST00000374902.8 protein_coding 100352772,100349184,100346694,100346072,100340257,100329931,100329140,100327787,100326302,100321683,100320265,100310299,100308500,100303632,100302084 100352939,100349372,100347406,100346315,100340369,100330169,100329275,100327962,100326479,100321771,100320398,100310379,100308681,100303842,100302304 Gene ID= ENSG00000136891.13 TPM= 10.87 Transcript Type= protein_coding chr9 100353065 100393869 100353065 100393869 . transcript1666.chr9.nnic@NA transcript1666.chr9.nnic NA 100353065,100353997,100390449,100392238 100353581,100354095,100390546,100393869 Gene ID= novel_gene_chr9_1667 TPM= 1.81 Transcript Type= NA chr9 100427156 100451229 100427156 100451229 + ENST00000395067.6@MSANTD3 ENST00000395067.6 protein_coding 100427156,100441906,100450557 100427393,100442356,100451229 Gene ID= ENSG00000066697.14 TPM= 7.24 Transcript Type= protein_coding chr9 101387633 101398614 101387633 101398614 - ENST00000374865.4@MRPL50 ENST00000374865.4 protein_coding 101398501,101387633 101398614,101390850 Gene ID= ENSG00000136897.7 TPM= 61.58 Transcript Type= protein_coding chr9 101474418 101487054 101474418 101487054 - transcript1681.chr9.nnic@TMEM246 transcript1681.chr9.nnic protein_coding 101486949,101475909,101474418 101487054,101477169,101475021 Gene ID= ENSG00000165152.8 TPM= 1.81 Transcript Type= NA chr9 101473171 101487193 101473171 101487193 - ENST00000374848.7@TMEM246 ENST00000374848.7 protein_coding 101486949,101473171 101487193,101477169 Gene ID= ENSG00000165152.8 TPM= 48.9 Transcript Type= protein_coding chr9 101533851 101563344 101533851 101563344 + ENST00000389120.7@RNF20 ENST00000389120.7 protein_coding 101533851,101535398,101540203,101540490,101540793,101544767,101546820,101547137,101547399,101550606,101551684,101552141,101552383,101553988,101554694,101557384,101560801,101561090,101561910,101562246 101533914,101535552,101540370,101540637,101540975,101544885,101546966,101547214,101547518,101550785,101551819,101552262,101552753,101554105,101554843,101557596,101560926,101561230,101562011,101563344 Gene ID= ENSG00000155827.11 TPM= 49.8 Transcript Type= protein_coding chr9 104747726 104760128 104747726 104760128 + transcript1701.chr9.nic@NIPSNAP3A transcript1701.chr9.nic protein_coding 104747726,104750956,104752906,104759085,104759262 104747852,104751166,104754700,104759171,104760128 Gene ID= ENSG00000136783.9 TPM= 2.72 Transcript Type= NA chr9 104747688 104760122 104747688 104760122 + ENST00000374767.4@NIPSNAP3A ENST00000374767.4 protein_coding 104747688,104750956,104752906,104754551,104759085,104759262 104747852,104751166,104753064,104754700,104759171,104760122 Gene ID= ENSG00000136783.9 TPM= 133.12 Transcript Type= protein_coding chr9 104764179 104777763 104764179 104777763 + transcript1693.chr9.nic@NIPSNAP3B transcript1693.chr9.nic protein_coding 104764179,104766325,104768863,104770849,104771234,104772822,104772997,104777128 104764300,104766535,104769021,104770998,104771316,104772908,104773176,104777763 Gene ID= ENSG00000165028.11 TPM= 2.11 Transcript Type= NA chr9 104764175 104777763 104764175 104777763 + transcript1696.chr9.nic@NIPSNAP3B transcript1696.chr9.nic protein_coding 104764175,104766325,104768863,104770849,104772822,104772997,104777128 104764300,104766535,104769021,104770998,104772908,104773176,104777763 Gene ID= ENSG00000165028.11 TPM= 3.02 Transcript Type= NA chr9 104764170 104774010 104764170 104774010 + ENST00000374762.3@NIPSNAP3B ENST00000374762.3 protein_coding 104764170,104766325,104768863,104770849,104772822,104772997 104764300,104766535,104769021,104770998,104772908,104774010 Gene ID= ENSG00000165028.11 TPM= 7.54 Transcript Type= protein_coding chr9 104781002 104928237 104781002 104928237 - ENST00000374736.7@ABCA1 ENST00000374736.7 protein_coding 104927935,104903614,104889102,104884427,104883039,104861679,104858522,104845477,104840279,104837428,104836980,104832574,104831622,104830925,104828916,104826948,104825683,104824465,104822496,104821375,104819927,104819586,104818663,104817332,104816143,104814427,104814118,104812574,104810800,104809466,104806241,104804626,104803284,104802054,104800510,104799819,104798421,104796309,104796053,104794387,104793171,104792786,104791936,104790922,104788426,104787920,104786873,104786298,104785396,104781002 104928237,104903771,104889195,104884568,104883157,104861800,104858698,104845569,104840519,104837567,104837096,104832771,104831827,104831101,104829138,104827169,104825887,104824578,104822667,104821506,104820069,104819723,104818883,104817404,104816345,104814475,104814231,104812722,104810924,104809564,104806430,104804720,104803316,104802159,104800584,104799988,104798598,104796424,104796197,104794510,104793300,104792906,104791998,104791028,104788567,104788054,104786976,104786390,104785639,104784455 Gene ID= ENSG00000165029.15 TPM= 44.37 Transcript Type= protein_coding chr9 104813886 104928155 104813886 104928155 - transcript1708.chr9.nic@ABCA1 transcript1708.chr9.nic protein_coding 104927935,104903614,104889102,104884427,104883039,104861679,104858522,104845477,104840279,104837428,104836980,104832574,104831622,104830925,104828916,104826948,104825683,104824465,104822496,104821375,104819927,104819586,104818663,104817332,104816143,104814427,104813886 104928155,104903771,104889195,104884568,104883157,104861800,104858698,104845569,104840519,104837567,104837096,104832771,104831827,104831101,104829138,104827169,104825887,104824578,104822667,104821506,104820069,104819723,104818883,104817404,104816345,104814475,104814231 Gene ID= ENSG00000165029.15 TPM= 2.72 Transcript Type= NA chr9 105244651 105391418 105244651 105391418 + transcript1727.chr9.nnic@SLC44A1 transcript1727.chr9.nnic protein_coding 105244651,105299220,105335563,105348358,105356212,105358344,105361191,105362821,105364555,105365483,105366346,105374598,105383123,105385422,105389033 105244904,105299309,105335699,105348451,105356381,105358433,105361330,105363007,105364720,105365639,105366429,105374735,105383359,105385502,105391418 Gene ID= ENSG00000070214.15 TPM= 4.53 Transcript Type= NA chr9 105694529 105775814 105694529 105775814 + transcript1730.chr9.nnic@TMEM38B transcript1730.chr9.nnic protein_coding 105694529,105705597,105714366,105721537,105722534,105748073,105773865 105694772,105705753,105714505,105721721,105722621,105748190,105775814 Gene ID= ENSG00000095209.11 TPM= 1.81 Transcript Type= NA chr9 105694529 105775814 105694529 105775814 + transcript1731.chr9.nic@TMEM38B transcript1731.chr9.nic protein_coding 105694529,105705597,105721537,105722534,105748073,105749073,105773865 105694772,105705753,105721721,105722621,105748190,105749111,105775814 Gene ID= ENSG00000095209.11 TPM= 1.81 Transcript Type= NA chr9 105694529 105775300 105694529 105775300 + transcript1736.chr9.nnic@TMEM38B transcript1736.chr9.nnic protein_coding 105694529,105705597,105721537,105722534,105773865 105694772,105705753,105721721,105722621,105775300 Gene ID= ENSG00000095209.11 TPM= 2.72 Transcript Type= NA chr9 105694529 105775813 105694529 105775813 + transcript1737.chr9.nnic@TMEM38B transcript1737.chr9.nnic protein_coding 105694529,105705597,105748073,105773865 105694772,105705753,105748190,105775813 Gene ID= ENSG00000095209.11 TPM= 1.81 Transcript Type= NA chr9 105694544 105776612 105694544 105776612 + ENST00000374692.7@TMEM38B ENST00000374692.7 protein_coding 105694544,105705597,105721537,105722534,105748073,105773865 105694772,105705753,105721721,105722621,105748190,105776612 Gene ID= ENSG00000095209.11 TPM= 64.29 Transcript Type= protein_coding chr9 106863097 107013634 106863097 107013634 + ENST00000277225.9@ZNF462 ENST00000277225.9 protein_coding 106863097,106923354,106924133,106930525,106932446,106935503,106938916,106972005,106974137,106984186,107003294,107009545,107010823 106863355,106923603,106929759,106930689,106932549,106935621,106939107,106972272,106974273,106984409,107003426,107009668,107013634 Gene ID= ENSG00000148143.12 TPM= 3.62 Transcript Type= protein_coding chr9 107283279 107332194 107283279 107332194 + ENST00000358015.7@RAD23B ENST00000358015.7 protein_coding 107283279,107300141,107302035,107306379,107311682,107318752,107321983,107323890,107324834,107329543 107283695,107300222,107302114,107306647,107311737,107318879,107322118,107324017,107325004,107332194 Gene ID= ENSG00000119318.12 TPM= 14.49 Transcript Type= protein_coding chr9 107484852 107488447 107484852 107488447 - ENST00000497048.5@KLF4 ENST00000497048.5 protein_coding 107487295,107487028,107484852 107488447,107487192,107485926 Gene ID= ENSG00000136826.14 TPM= 4.53 Transcript Type= retained_intron chr9 108867519 108885921 108867519 108885921 - transcript1765.chr9.nnic@ELP1 transcript1765.chr9.nnic protein_coding 108885768,108882125,108881663,108880052,108879446,108878623,108877995,108874895,108867519 108885921,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182 Gene ID= ENSG00000070061.14 TPM= 18.74 Transcript Type= NA chr9 108866664 108885777 108866664 108885777 - transcript1771.chr9.nnic@ELP1 transcript1771.chr9.nnic protein_coding 108885389,108882125,108881705,108880052,108879446,108878623,108877995,108874895,108866664 108885777,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182 Gene ID= ENSG00000070061.14 TPM= 22.14 Transcript Type= NA chr9 108866400 108885921 108866400 108885921 - transcript1773.chr9.nnic@ELP1 transcript1773.chr9.nnic protein_coding 108885768,108882125,108881705,108880052,108879446,108878623,108877995,108874895,108866400 108885921,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182 Gene ID= ENSG00000070061.14 TPM= 587.68 Transcript Type= NA chr9 108867517 108934116 108867517 108934116 - ENST00000374647.9@ELP1 ENST00000374647.9 protein_coding 108933864,108930997,108929769,108927372,108926523,108922842,108919253,108918811,108917547,108916204,108912264,108911010,108908305,108906303,108903563,108902839,108901628,108901425,108900260,108899822,108898671,108898502,108897148,108896953,108896496,108893943,108892986,108891203,108889332,108882125,108881705,108880052,108879446,108878623,108877995,108874895,108867517 108934116,108931201,108929921,108927453,108926603,108922927,108919349,108918901,108917670,108916297,108912494,108911180,108908404,108906485,108903669,108902942,108901681,108901530,108900375,108899895,108898749,108898581,108897285,108897038,108896644,108894066,108893083,108891404,108889393,108882187,108881765,108880165,108879557,108878750,108878149,108874970,108869182 Gene ID= ENSG00000070061.14 TPM= 21.89 Transcript Type= protein_coding chr9 108934181 108940968 108934181 108940968 + ENST00000322940.10@FAM206A ENST00000322940.10 protein_coding 108934181,108935638,108936308,108939196,108939385,108939549 108934565,108935689,108936437,108939272,108939454,108940968 Gene ID= ENSG00000119328.11 TPM= 9.35 Transcript Type= protein_coding chr9 108934382 108940955 108934382 108940955 + transcript1830.chr9.nnic@FAM206A transcript1830.chr9.nnic protein_coding 108934382,108935638,108939196,108939385,108939549 108934565,108935689,108939272,108939454,108940955 Gene ID= ENSG00000119328.11 TPM= 3.02 Transcript Type= NA chr9 108934462 108940955 108934462 108940955 + transcript1831.chr9.nic@FAM206A transcript1831.chr9.nic protein_coding 108934462,108935638,108939196,108939385,108939549 108934565,108936437,108939272,108939454,108940955 Gene ID= ENSG00000119328.11 TPM= 2.11 Transcript Type= NA chr9 108942571 109013529 108942571 109013529 - ENST00000325551.8@CTNNAL1 ENST00000325551.8 protein_coding 109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942571 109013529,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942834 Gene ID= ENSG00000119326.14 TPM= 1832.38 Transcript Type= protein_coding chr9 108942569 109013637 108942569 109013637 - transcript1804.chr9.nnic@CTNNAL1 transcript1804.chr9.nnic protein_coding 109013302,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942569 109013637,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942834 Gene ID= ENSG00000119326.14 TPM= 94.04 Transcript Type= NA chr9 108942569 109013522 108942569 109013522 - ENST00000374595.8@CTNNAL1 ENST00000374595.8 protein_coding 109013302,108999067,108992632,108990726,108984347,108983145,108979281,108976962,108972675,108970402,108965378,108955790,108952444,108952209,108948186,108943962,108943703,108942961,108942569 109013522,108999256,108992819,108990845,108984436,108983315,108979481,108977048,108972833,108970494,108965528,108955827,108952494,108952363,108948234,108944018,108943816,108943044,108942871 Gene ID= ENSG00000119326.14 TPM= 56.28 Transcript Type= protein_coding chr9 109015154 109119937 109015154 109119937 - transcript1850.chr9.nnic@TMEM245 transcript1850.chr9.nnic protein_coding 109119335,109108453,109106508,109093475,109090922,109087173,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109015154 109119937,109108570,109106609,109093591,109091155,109087342,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505 Gene ID= ENSG00000106771.12 TPM= 14.94 Transcript Type= NA chr9 109015152 109119945 109015152 109119945 - ENST00000374586.7@TMEM245 ENST00000374586.7 protein_coding 109119335,109108453,109106508,109093475,109090922,109087173,109085997,109080839,109073356,109064477,109060354,109057191,109050570,109050283,109038017,109036206,109033307,109015152 109119945,109108570,109106609,109093591,109091155,109087342,109086020,109080943,109073438,109064567,109060452,109057322,109050692,109050428,109038117,109036380,109033501,109020505 Gene ID= ENSG00000106771.12 TPM= 342.75 Transcript Type= protein_coding chr9 109130293 109167291 109130293 109167291 - ENST00000561981.2@FRRS1L ENST00000561981.2 protein_coding 109166901,109149636,109147051,109141343,109130293 109167291,109149720,109147189,109141589,109137627 Gene ID= ENSG00000260230.2 TPM= 4.53 Transcript Type= protein_coding chr9 109140728 109167235 109140728 109167235 - transcript1863.chr9.nic@FRRS1L transcript1863.chr9.nic protein_coding 109166901,109149636,109147051,109140728 109167235,109149720,109147189,109141589 Gene ID= ENSG00000260230.2 TPM= 5.43 Transcript Type= NA chr9 109239731 109320964 109239731 109320964 - ENST00000374557.4@EPB41L4B ENST00000374557.4 protein_coding 109320141,109279817,109268391,109267473,109264980,109263050,109258177,109256393,109256136,109255774,109255511,109253441,109251481,109247756,109243618,109239731 109320964,109279921,109268433,109267551,109265024,109263102,109258297,109256480,109256224,109255843,109255680,109253550,109251511,109247789,109243682,109241809 Gene ID= ENSG00000095203.14 TPM= 47.99 Transcript Type= protein_coding chr9 110048696 110172512 110048696 110172512 + ENST00000374525.5@AKAP2 ENST00000374525.5 protein_coding 110048696,110136127,110156319,110168399 110048855,110138539,110156497,110172512 Gene ID= ENSG00000241978.9 TPM= 7.7 Transcript Type= protein_coding chr9 110048696 110172505 110048696 110172505 + transcript1877.chr9.nic@AKAP2 transcript1877.chr9.nic protein_coding 110048696,110136127,110168399 110048855,110138539,110172505 Gene ID= ENSG00000241978.9 TPM= 9.51 Transcript Type= NA chr9 110366000 110408454 110366000 110408454 - transcript1879.chr9.nic@SVEP1 transcript1879.chr9.nic protein_coding 110406160,110404327,110400854,110389524,110387285,110385898,110379347,110377271,110375368,110369923,110366000 110408454,110404552,110401009,110389587,110387458,110386074,110379517,110377366,110375463,110370016,110366560 Gene ID= ENSG00000165124.17 TPM= 3.62 Transcript Type= NA chr9 110873264 111038483 110873264 111038483 - transcript1882.chr9.nic@LPAR1 transcript1882.chr9.nic protein_coding 111038167,110973481,110972073,110941421,110873264 111038483,110973558,110972220,110942168,110875722 Gene ID= ENSG00000198121.13 TPM= 4.53 Transcript Type= NA chr9 111361889 111483927 111361889 111483927 - transcript1884.chr9.nnic@KIAA0368 transcript1884.chr9.nnic protein_coding 111483504,111472897,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361889 111483927,111473000,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169 Gene ID= ENSG00000136813.14 TPM= 4.71 Transcript Type= NA chr9 111361889 111484369 111361889 111484369 - transcript1885.chr9.nnic@KIAA0368 transcript1885.chr9.nnic protein_coding 111484116,111472897,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361889 111484369,111473000,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169 Gene ID= ENSG00000136813.14 TPM= 3.8 Transcript Type= NA chr9 111361875 111483933 111361875 111483933 - transcript1887.chr9.nic@KIAA0368 transcript1887.chr9.nic protein_coding 111483504,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111361875 111483933,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169 Gene ID= ENSG00000136813.14 TPM= 13.76 Transcript Type= NA chr9 111360693 111484745 111360693 111484745 - ENST00000259335.8@KIAA0368 ENST00000259335.8 protein_coding 111484662,111484354,111483985,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111360693 111484745,111484548,111484261,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169 Gene ID= ENSG00000136813.14 TPM= 2.9 Transcript Type= protein_coding chr9 111360692 111484357 111360692 111484357 - ENST00000338205.9@KIAA0368 ENST00000338205.9 protein_coding 111484116,111451425,111444378,111442306,111440372,111436940,111433233,111430547,111428042,111425743,111425418,111423199,111422134,111421921,111420017,111417883,111416272,111414429,111413895,111412014,111410980,111410041,111408571,111397030,111394160,111393680,111392768,111391756,111389984,111389556,111386377,111385337,111384522,111383211,111378580,111376476,111375113,111373972,111373315,111373170,111372429,111371621,111370722,111370435,111369035,111366522,111366239,111363588,111360692 111484357,111451555,111444494,111442424,111440521,111437108,111433372,111430628,111428161,111425828,111425496,111423248,111422200,111422043,111420120,111418006,111416352,111414651,111413986,111412148,111411142,111410213,111408672,111397153,111394305,111393734,111392882,111391824,111390101,111389723,111386456,111385442,111384569,111383332,111378730,111376541,111375202,111374038,111373406,111373236,111372620,111371829,111370765,111370627,111369173,111366627,111366327,111363659,111362169 Gene ID= ENSG00000136813.14 TPM= 16.48 Transcript Type= protein_coding chr9 111562967 111599407 111562967 111599407 - ENST00000309195.9@PTGR1 ENST00000309195.9 protein_coding 111599339,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967 111599407,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231 Gene ID= ENSG00000106853.18 TPM= 54.33 Transcript Type= protein_coding chr9 111562967 111599855 111562967 111599855 - ENST00000407693.6@PTGR1 ENST00000407693.6 protein_coding 111599603,111597317,111594222,111592926,111585998,111583472,111578796,111574734,111570091,111562967 111599855,111597432,111594267,111592982,111586165,111583589,111578951,111574842,111570209,111563231 Gene ID= ENSG00000106853.18 TPM= 55.24 Transcript Type= protein_coding chr9 111631352 111654351 111631352 111654351 + ENST00000313525.3@DNAJC25 ENST00000313525.3 protein_coding 111631352,111647107,111649453,111653100 111631743,111647259,111649923,111654351 Gene ID= ENSG00000059769.19 TPM= 19.47 Transcript Type= protein_coding chr9 111631360 111654351 111631360 111654351 + ENST00000447096.1@DNAJC25 ENST00000447096.1 protein_coding 111631360,111642857,111647107,111649453,111653100 111631743,111643094,111647259,111649923,111654351 Gene ID= ENSG00000059769.19 TPM= 11.32 Transcript Type= nonsense_mediated_decay chr9 111661335 111670246 111661335 111670246 + ENST00000374293.4@GNG10 ENST00000374293.4 protein_coding 111661335,111666815,111669269 111661715,111666946,111670246 Gene ID= ENSG00000242616.3 TPM= 107.76 Transcript Type= protein_coding chr9 111755745 111784061 111755745 111784061 - transcript1915.chr9.nnic@C9orf84 transcript1915.chr9.nnic protein_coding 111783799,111780930,111775791,111758695,111758084,111756325,111755745 111784061,111781017,111775975,111758848,111758195,111756478,111756094 Gene ID= ENSG00000165181.16 TPM= 1.81 Transcript Type= NA chr9 111896766 111935369 111896766 111935369 + ENST00000374279.3@UGCG ENST00000374279.3 protein_coding 111896766,111914605,111922849,111924777,111926384,111929500,111931271,111932170,111932827 111897313,111914746,111922951,111924878,111926496,111929678,111931357,111932359,111935369 Gene ID= ENSG00000148154.9 TPM= 138.55 Transcript Type= protein_coding chr9 112040785 112175422 112040785 112175422 - transcript1923.chr9.nic@SUSD1 transcript1923.chr9.nic protein_coding 112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111650,112103129,112102176,112098470,112080074,112078538,112062937,112058428,112052399,112041867,112040785 112175422,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112103163,112102285,112098662,112080165,112078724,112063033,112058686,112052438,112041960,112041492 Gene ID= ENSG00000106868.16 TPM= 2.94 Transcript Type= NA chr9 112040776 112175437 112040776 112175437 - transcript1924.chr9.nnic@SUSD1 transcript1924.chr9.nnic protein_coding 112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111654,112102176,112098470,112080074,112078538,112062937,112058428,112052399,112041867,112040776 112175437,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112102285,112098662,112080165,112078724,112063033,112058605,112052438,112041960,112041492 Gene ID= ENSG00000106868.16 TPM= 2.04 Transcript Type= NA chr9 112056494 112175289 112056494 112175289 - transcript1930.chr9.nic@SUSD1 transcript1930.chr9.nic protein_coding 112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111654,112102176,112098470,112080074,112078538,112062937,112056494 112175289,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112102285,112098662,112080165,112078724,112063033,112058686 Gene ID= ENSG00000106868.16 TPM= 1.81 Transcript Type= NA chr9 112040785 112175297 112040785 112175297 - ENST00000374263.7@SUSD1 ENST00000374263.7 protein_coding 112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111654,112102176,112098470,112080074,112078538,112062937,112058428,112041867,112040785 112175297,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112102285,112098662,112080165,112078724,112063033,112058686,112041960,112041492 Gene ID= ENSG00000106868.16 TPM= 4.75 Transcript Type= protein_coding chr9 112040785 112175408 112040785 112175408 - ENST00000374270.7@SUSD1 ENST00000374270.7 protein_coding 112175133,112157500,112149244,112143471,112142320,112124257,112112771,112111654,112102176,112098470,112080074,112078538,112062937,112058428,112052399,112041867,112040785 112175408,112157613,112149399,112143623,112142499,112124436,112112868,112111840,112102285,112098662,112080165,112078724,112063033,112058686,112052438,112041960,112041492 Gene ID= ENSG00000106868.16 TPM= 18.34 Transcript Type= protein_coding chr9 112218435 112333667 112218435 112333667 - ENST00000374257.5@PTBP3 ENST00000374257.5 protein_coding 112333470,112297832,112275844,112268049,112262435,112252678,112250929,112234820,112232099,112231380,112228380,112227411,112224133,112218435 112333667,112297916,112276013,112268195,112262599,112252788,112251103,112234897,112232238,112231413,112228472,112227627,112224210,112223983 Gene ID= ENSG00000119314.15 TPM= 4.53 Transcript Type= protein_coding chr9 112380060 112472408 112380060 112472408 + transcript1943.chr9.nic@HSDL2 transcript1943.chr9.nic protein_coding 112380060,112405624,112408907,112416841,112418860,112438431,112441699,112454013,112459449,112470432 112380180,112405722,112409021,112416944,112418958,112438625,112441770,112454162,112459577,112472408 Gene ID= ENSG00000119471.14 TPM= 8.59 Transcript Type= NA chr9 112379937 112472410 112379937 112472410 + ENST00000398805.7@HSDL2 ENST00000398805.7 protein_coding 112379937,112403995,112405624,112408907,112416841,112418860,112438431,112441699,112454013,112459449,112470432 112380180,112404158,112405722,112409021,112416944,112418958,112438625,112441770,112454162,112459577,112472410 Gene ID= ENSG00000119471.14 TPM= 211.89 Transcript Type= protein_coding chr9 112380080 112472405 112380080 112472405 + ENST00000398803.1@HSDL2 ENST00000398803.1 protein_coding 112380080,112403995,112405624,112418860,112438431,112441699,112454013,112459449,112470432 112380180,112404158,112405722,112418958,112438625,112441770,112454162,112459577,112472405 Gene ID= ENSG00000119471.14 TPM= 8.14 Transcript Type= protein_coding chr9 112451799 112487645 112451799 112487645 - transcript1953.chr9.nnic@C9orf147 transcript1953.chr9.nnic antisense_RNA 112486979,112486390,112484456,112451799 112487645,112486541,112484624,112454072 Gene ID= ENSG00000230185.4 TPM= 3.62 Transcript Type= NA chr9 112486847 112669397 112486847 112669397 + ENST00000337530.10@KIAA1958 ENST00000337530.10 protein_coding 112486847,112574057,112645650,112659263 112487118,112575251,112645822,112669397 Gene ID= ENSG00000165185.14 TPM= 3.62 Transcript Type= protein_coding chr9 112683926 112718236 112683926 112718236 - ENST00000374242.8@INIP ENST00000374242.8 protein_coding 112717987,112716461,112694131,112689527,112683926 112718236,112716541,112694233,112689617,112687633 Gene ID= ENSG00000148153.13 TPM= 5.43 Transcript Type= protein_coding chr9 113038380 113056716 113038380 113056716 - ENST00000374227.7@ZFP37 ENST00000374227.7 protein_coding 113056557,113049791,113049362,113038380 113056716,113049872,113049496,113044268 Gene ID= ENSG00000136866.13 TPM= 2.72 Transcript Type= protein_coding chr9 113150942 113164137 113150942 113164137 + ENST00000259392.7@SLC31A2 ENST00000259392.7 protein_coding 113150942,113157727,113161509,113162749 113151080,113157793,113161698,113164137 Gene ID= ENSG00000136867.10 TPM= 50.71 Transcript Type= protein_coding chr9 113150940 113164140 113150940 113164140 + transcript1975.chr9.nnic@SLC31A2 transcript1975.chr9.nnic protein_coding 113150940,113157727,113161509,113163335 113151080,113157793,113161698,113164140 Gene ID= ENSG00000136867.10 TPM= 3.62 Transcript Type= NA chr9 113165519 113221306 113165519 113221306 - transcript1968.chr9.nnic@FKBP15 transcript1968.chr9.nnic protein_coding 113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113190471,113188389,113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165963,113165519 113221306,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578,113188491,113187899,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155,113165920 Gene ID= ENSG00000119321.8 TPM= 2.72 Transcript Type= NA chr9 113205260 113221366 113205260 113221366 - transcript1976.chr9.nic@FKBP15 transcript1976.chr9.nic protein_coding 113221191,113211477,113207212,113205260 113221366,113211592,113207296,113206578 Gene ID= ENSG00000119321.8 TPM= 1.81 Transcript Type= NA chr9 113165520 113221361 113165520 113221361 - ENST00000238256.7@FKBP15 ENST00000238256.7 protein_coding 113221191,113211477,113207212,113206509,113202961,113202531,113199814,113198855,113196932,113194027,113193492,113190471,113188389,113187793,113186249,113184695,113184292,113183751,113182766,113178630,113176537,113174428,113173453,113171581,113170522,113169224,113168460,113165520 113221361,113211592,113207296,113206578,113203035,113202629,113199963,113198923,113197078,113194169,113193549,113190578,113188491,113187899,113186363,113184804,113184399,113183845,113182868,113178801,113176673,113174583,113173605,113171706,113170629,113169942,113168556,113166155 Gene ID= ENSG00000119321.8 TPM= 14.49 Transcript Type= protein_coding chr9 113221525 113259365 113221525 113259365 + transcript1981.chr9.nic@SLC31A1 transcript1981.chr9.nic protein_coding 113221525,113256114,113257113,113258694 113221678,113256277,113257185,113259365 Gene ID= ENSG00000136868.10 TPM= 1.81 Transcript Type= NA chr9 113221562 113264492 113221562 113264492 + ENST00000374212.4@SLC31A1 ENST00000374212.4 protein_coding 113221562,113256114,113257113,113258694,113260272 113221678,113256277,113257185,113258862,113264492 Gene ID= ENSG00000136868.10 TPM= 30.79 Transcript Type= protein_coding chr9 113266994 113275379 113266994 113275379 - transcript1986.chr9.nnic@CDC26 transcript1986.chr9.nnic protein_coding 113275230,113273329,113272427,113266994 113275379,113273438,113272548,113267439 Gene ID= ENSG00000176386.8 TPM= 2.72 Transcript Type= NA chr9 113266994 113275585 113266994 113275585 - transcript1988.chr9.nnic@CDC26 transcript1988.chr9.nnic protein_coding 113275463,113273329,113272427,113266994 113275585,113273438,113272548,113267439 Gene ID= ENSG00000176386.8 TPM= 2.72 Transcript Type= NA chr9 113267008 113275589 113267008 113275589 - ENST00000374206.3@CDC26 ENST00000374206.3 protein_coding 113275382,113273329,113272427,113267008 113275589,113273438,113272548,113267439 Gene ID= ENSG00000176386.8 TPM= 30.79 Transcript Type= protein_coding chr9 113275642 113292776 113275642 113292776 + ENST00000374198.4@PRPF4 ENST00000374198.4 protein_coding 113275642,113276545,113278945,113282646,113283132,113283389,113284295,113286232,113286705,113288175,113290466,113290700,113290898,113291467 113275770,113276725,113279131,113282733,113283211,113283482,113284389,113286290,113286828,113288264,113290588,113290807,113291016,113292776 Gene ID= ENSG00000136875.12 TPM= 32.6 Transcript Type= protein_coding chr9 113313226 113340305 113313226 113340305 - transcript1998.chr9.nnic@WDR31 transcript1998.chr9.nnic protein_coding 113340217,113336288,113331907,113330984,113328881,113323011,113322811,113321511,113320357,113318475,113314945,113313226 113340305,113336440,113332050,113331113,113328955,113323155,113322911,113321578,113320498,113318637,113316909,113313898 Gene ID= ENSG00000148225.15 TPM= 1.81 Transcript Type= NA chr9 113349541 113371233 113349541 113371233 + ENST00000374183.4@BSPRY ENST00000374183.4 protein_coding 113349541,113354240,113360507,113362369,113368259,113369616 113349780,113354338,113360737,113362394,113368383,113371233 Gene ID= ENSG00000119411.10 TPM= 18.11 Transcript Type= protein_coding chr9 113349542 113371233 113349542 113371233 + ENST00000462085.1@BSPRY ENST00000462085.1 protein_coding 113349542,113354240,113360507,113362369,113369616 113349780,113354338,113360737,113362394,113371233 Gene ID= ENSG00000119411.10 TPM= 1.81 Transcript Type= processed_transcript chr9 113373419 113376999 113373419 113376999 - ENST00000374180.3@HDHD3 ENST00000374180.3 protein_coding 113376729,113375453,113373419 113376999,113375567,113374529 Gene ID= ENSG00000119431.9 TPM= 137.64 Transcript Type= protein_coding chr9 113386304 113401306 113386304 113401306 - transcript2039.chr9.nic@ALAD transcript2039.chr9.nic protein_coding 113401212,113393447,113392119,113391527,113390593,113390405,113389773,113389599,113389438,113388977,113386304 113401306,113393634,113392169,113391623,113390933,113390493,113389828,113389686,113389524,113389106,113388361 Gene ID= ENSG00000148218.15 TPM= 30.73 Transcript Type= NA chr9 113386317 113401333 113386317 113401333 - ENST00000409155.7@ALAD ENST00000409155.7 protein_coding 113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386317 113401333,113393634,113392169,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361 Gene ID= ENSG00000148218.15 TPM= 574.92 Transcript Type= protein_coding chr9 113386319 113401243 113386319 113401243 - ENST00000482847.5@ALAD ENST00000482847.5 protein_coding 113401212,113393447,113392119,113391527,113390798,113390593,113390405,113389773,113389599,113389438,113388977,113386319 113401243,113393634,113392335,113391623,113390933,113390676,113390493,113389828,113389686,113389524,113389106,113388361 Gene ID= ENSG00000148218.15 TPM= 14.39 Transcript Type= retained_intron chr9 113410686 113429684 113410686 113429684 + ENST00000374165.5@C9orf43 ENST00000374165.5 protein_coding 113410686,113413445,113413759,113419108,113421103,113422549,113423326,113424166,113425019,113425344,113425643,113428147,113428900,113429172 113411001,113413644,113413894,113419165,113421203,113422585,113423498,113424316,113425076,113425420,113425730,113428223,113428963,113429684 Gene ID= ENSG00000157653.11 TPM= 3.62 Transcript Type= protein_coding chr9 113501412 113544126 113501412 113544126 + transcript2058.chr9.nic@RGS3 transcript2058.chr9.nic protein_coding 113501412,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113541320 113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113544126 Gene ID= ENSG00000138835.22 TPM= 2.72 Transcript Type= NA chr9 113580660 113597738 113580660 113597738 + ENST00000374134.7@RGS3 ENST00000374134.7 protein_coding 113580660,113582072,113583450,113591333,113594430,113594919,113595599,113596768 113581005,113582242,113584427,113591397,113594531,113594980,113595765,113597738 Gene ID= ENSG00000138835.22 TPM= 1.36 Transcript Type= protein_coding chr9 113501427 113597738 113501427 113597738 + ENST00000343817.9@RGS3 ENST00000343817.9 protein_coding 113501427,113505442,113506388,113507287,113508541,113514458,113517541,113522930,113529221,113536796,113583450,113591333,113594430,113594919,113595599,113596768 113501630,113505523,113506493,113507638,113508580,113514654,113517624,113523041,113529264,113536918,113584427,113591397,113594531,113594980,113595765,113597738 Gene ID= ENSG00000138835.22 TPM= 4.53 Transcript Type= protein_coding chr9 114177942 114312515 114177942 114312515 + transcript2071.chr9.nnic@COL27A1 transcript2071.chr9.nnic protein_coding 114177942,114178291,114183022,114194404,114195959,114205102,114205759,114206252,114209675,114210982,114219791,114222223,114231079,114231822,114235599,114236981,114237662,114240220,114240434,114242187,114243507,114245866,114250615,114252593,114252879,114258541,114264355,114264924,114265066,114265422,114266565,114267504,114269241,114270728,114275661,114282277,114282457,114283709,114284724,114288455,114288702,114288914,114289242,114290058,114290224,114290810,114292103,114300070,114300625,114301072,114301284,114301445,114301682,114302082,114304608,114306520,114307669,114309260,114310549 114177976,114178344,114183075,114194457,114196012,114205146,114205812,114206296,114209728,114211026,114219844,114222267,114231132,114231866,114235652,114237034,114237715,114240273,114240487,114242231,114243560,114245910,114250668,114252646,114252932,114258594,114264408,114264968,114265110,114265475,114266618,114267557,114269294,114270781,114275768,114282330,114282564,114283762,114284777,114288511,114288755,114288967,114289295,114290111,114290331,114290917,114292210,114300123,114300687,114301125,114301319,114301462,114301717,114302108,114304673,114306688,114307778,114309478,114312515 Gene ID= ENSG00000196739.14 TPM= 16.3 Transcript Type= NA chr9 114323056 114326475 114323056 114326475 + ENST00000259396.8@ORM1 ENST00000259396.8 protein_coding 114323056,114323663,114324018,114324790,114325049,114326292 114323247,114323805,114324088,114324897,114325152,114326475 Gene ID= ENSG00000229314.5 TPM= 5.43 Transcript Type= protein_coding chr9 114329869 114333252 114329869 114333252 + ENST00000431067.2@ORM2 ENST00000431067.2 protein_coding 114329869,114330434,114330792,114331567,114331826,114333069 114330018,114330576,114330862,114331674,114331929,114333252 Gene ID= ENSG00000228278.3 TPM= 2.72 Transcript Type= protein_coding chr9 114402074 114505526 114402074 114505526 - transcript2088.chr9.nnic@WHRN transcript2088.chr9.nnic protein_coding 114505195,114504184,114478553,114466267,114426211,114424988,114424334,114423314,114407947,114406355,114403896,114403217,114402074 114505526,114505051,114478771,114466392,114426413,114425024,114424546,114423523,114408018,114406892,114404077,114403339,114402936 Gene ID= ENSG00000095397.13 TPM= 40.14 Transcript Type= NA chr9 114478321 114505526 114478321 114505526 - transcript2108.chr9.nnic@WHRN transcript2108.chr9.nnic protein_coding 114505195,114504184,114478321 114505526,114505051,114478771 Gene ID= ENSG00000095397.13 TPM= 7.24 Transcript Type= NA chr9 114402081 114504970 114402081 114504970 - ENST00000362057.3@WHRN ENST00000362057.3 protein_coding 114504184,114478553,114466267,114426211,114424988,114424334,114423314,114407947,114406355,114403896,114403217,114402081 114504970,114478771,114466392,114426413,114425024,114424546,114423523,114408018,114406892,114404077,114403339,114402936 Gene ID= ENSG00000095397.13 TPM= 23.84 Transcript Type= protein_coding chr9 114478321 114505450 114478321 114505450 - ENST00000374057.3@WHRN ENST00000374057.3 protein_coding 114504184,114478321 114505450,114478771 Gene ID= ENSG00000095397.13 TPM= 11.77 Transcript Type= protein_coding chr9 114587746 114598373 114587746 114598373 + ENST00000374050.3@ATP6V1G1 ENST00000374050.3 protein_coding 114587746,114592552,114597570 114587920,114592652,114598373 Gene ID= ENSG00000136888.6 TPM= 230.01 Transcript Type= protein_coding chr9 114611261 114645720 114611261 114645720 + transcript2114.chr9.nic@TMEM268 transcript2114.chr9.nic protein_coding 114611261,114617118,114624136,114626899,114628101,114633768,114636990,114638544,114643134 114611564,114617301,114624459,114627006,114628250,114633878,114637070,114638726,114645720 Gene ID= ENSG00000157693.14 TPM= 2.26 Transcript Type= NA chr9 114611206 114646422 114611206 114646422 + ENST00000374049.4@TMEM268 ENST00000374049.4 protein_coding 114611206,114617118,114624350,114626896,114628101,114633768,114636990,114638544,114643134 114611564,114617301,114624459,114627006,114628250,114633878,114637070,114638726,114646422 Gene ID= ENSG00000157693.14 TPM= 5.89 Transcript Type= protein_coding chr9 115020527 115118156 115020527 115118156 - transcript2119.chr9.nnic@TNC transcript2119.chr9.nnic protein_coding 115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115064647,115063796,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020527 115118156,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115064919,115064068,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267 Gene ID= ENSG00000041982.15 TPM= 2.72 Transcript Type= NA chr9 115020527 115118262 115020527 115118262 - transcript2121.chr9.nic@TNC transcript2121.chr9.nic protein_coding 115117982,115090562,115085864,115084209,115082692,115081772,115077943,115076390,115076032,115073603,115042219,115040941,115038261,115036098,115035204,115031553,115030254,115029360,115026534,115023973,115020527 115118262,115091154,115087273,115084472,115082807,115081928,115078212,115076575,115076121,115073866,115042341,115041084,115038380,115036241,115035334,115031685,115030405,115029456,115026695,115024136,115021267 Gene ID= ENSG00000041982.15 TPM= 22.64 Transcript Type= NA chr9 116424614 116687252 116424614 116687252 - transcript2123.chr9.nic@ASTN2 transcript2123.chr9.nic protein_coding 116687066,116651528,116620310,116618324,116487359,116442453,116440609,116424614 116687252,116651793,116620443,116618472,116487500,116442553,116440792,116426088 Gene ID= ENSG00000148219.16 TPM= 11.77 Transcript Type= NA chr9 116687302 116701298 116687302 116701298 + ENST00000450136.1@TRIM32 ENST00000450136.1 protein_coding 116687302,116697662 116687381,116701298 Gene ID= ENSG00000119401.10 TPM= 23.09 Transcript Type= protein_coding chr9 116687330 116701300 116687330 116701300 + ENST00000373983.2@TRIM32 ENST00000373983.2 protein_coding 116687330,116697665 116687381,116701300 Gene ID= ENSG00000119401.10 TPM= 19.47 Transcript Type= protein_coding chr9 117704372 117716871 117704372 117716871 + ENST00000355622.6@TLR4 ENST00000355622.6 protein_coding 117704372,117708563,117712389 117704565,117708729,117716871 Gene ID= ENSG00000136869.13 TPM= 8.15 Transcript Type= protein_coding chr9 120388876 120580170 120388876 120580170 - transcript2134.chr9.nic@CDK5RAP2 transcript2134.chr9.nic protein_coding 120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120388876 120580170,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292 Gene ID= ENSG00000136861.17 TPM= 5.28 Transcript Type= NA chr9 120388870 120580158 120388870 120580158 - ENST00000349780.8@CDK5RAP2 ENST00000349780.8 protein_coding 120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120460572,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120407012,120404036,120402806,120400742,120394512,120389741,120388870 120580158,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120460667,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120407248,120404113,120403071,120400885,120394638,120389787,120389292 Gene ID= ENSG00000136861.17 TPM= 9.81 Transcript Type= protein_coding chr9 120388876 120580158 120388876 120580158 - ENST00000360190.8@CDK5RAP2 ENST00000360190.8 protein_coding 120579920,120571974,120568321,120550792,120545714,120539041,120536372,120529978,120528744,120527806,120524986,120518427,120491307,120487294,120477350,120471748,120470111,120467860,120460572,120458450,120453456,120447895,120443620,120439399,120437295,120422693,120419788,120415040,120411358,120409127,120408347,120404036,120402806,120400742,120394512,120389741,120388876 120580158,120572041,120568388,120550902,120545790,120539164,120536526,120530140,120528797,120527925,120525078,120518645,120491477,120487437,120477450,120471878,120470220,120467997,120460667,120458622,120453873,120448126,120443742,120439972,120437527,120422741,120419960,120415159,120411474,120409316,120408468,120404113,120403071,120400885,120394638,120389787,120389292 Gene ID= ENSG00000136861.17 TPM= 3.02 Transcript Type= protein_coding chr9 120764170 120793427 120764170 120793427 - transcript2140.chr9.nic@FBXW2 transcript2140.chr9.nic protein_coding 120793354,120793149,120787769,120778351,120776093,120772754,120771348,120764170 120793427,120793257,120788186,120778545,120776226,120772840,120771517,120764847 Gene ID= ENSG00000119402.16 TPM= 9.06 Transcript Type= NA chr9 120759267 120793425 120759267 120793425 - transcript2144.chr9.nnic@FBXW2 transcript2144.chr9.nnic protein_coding 120793360,120793149,120787769,120778351,120776093,120772754,120771348,120759267 120793425,120793257,120788278,120778545,120776226,120772840,120771517,120764847 Gene ID= ENSG00000119402.16 TPM= 13.58 Transcript Type= NA chr9 120764173 120793361 120764173 120793361 - transcript2146.chr9.nic@FBXW2 transcript2146.chr9.nic protein_coding 120793149,120787769,120778351,120776093,120772754,120771348,120764173 120793361,120788186,120778545,120776226,120772840,120771517,120764847 Gene ID= ENSG00000119402.16 TPM= 2.72 Transcript Type= NA chr9 120764178 120793360 120764178 120793360 - transcript2147.chr9.nic@FBXW2 transcript2147.chr9.nic protein_coding 120793149,120787769,120778351,120776093,120772754,120771348,120764178 120793360,120788278,120778545,120776226,120772840,120771517,120764847 Gene ID= ENSG00000119402.16 TPM= 1.81 Transcript Type= NA chr9 120756974 120793412 120756974 120793412 - ENST00000608872.5@FBXW2 ENST00000608872.5 protein_coding 120793354,120793149,120787769,120778351,120776093,120772754,120771348,120756974 120793412,120793257,120788278,120778545,120776226,120772840,120771517,120764847 Gene ID= ENSG00000119402.16 TPM= 46.18 Transcript Type= protein_coding chr9 120816053 120842984 120816053 120842984 - ENST00000210313.7@PSMD5 ENST00000210313.7 protein_coding 120842737,120833312,120831832,120831331,120829099,120826765,120824494,120821355,120820839,120816053 120842984,120833456,120831945,120831459,120829208,120826907,120824685,120821464,120820979,120818163 Gene ID= ENSG00000095261.13 TPM= 97.8 Transcript Type= protein_coding chr9 120843085 120854366 120843085 120854366 + transcript2158.chr9.nic@PSMD5-AS1 transcript2158.chr9.nic transcribed_unitary_pseudogene 120843085,120844993,120847294,120851238 120844899,120845196,120847353,120854366 Gene ID= ENSG00000226752.9 TPM= 3.62 Transcript Type= NA chr9 120855652 120868911 120855652 120868911 - ENST00000419155.5@PHF19 ENST00000419155.5 protein_coding 120868808,120866870,120866028,120865710,120864049,120862588,120861918,120861089,120860090,120855652 120868911,120866965,120866096,120865830,120864116,120862749,120862005,120861174,120860185,120858286 Gene ID= ENSG00000119403.13 TPM= 6.34 Transcript Type= protein_coding chr9 120869574 120877031 120869574 120877031 - transcript2168.chr9.nic@PHF19 transcript2168.chr9.nic protein_coding 120876981,120874556,120873979,120870443,120869574 120877031,120874756,120874060,120870538,120869945 Gene ID= ENSG00000119403.13 TPM= 1.81 Transcript Type= NA chr9 120869587 120877188 120869587 120877188 - ENST00000312189.10@PHF19 ENST00000312189.10 protein_coding 120877091,120874556,120873979,120870443,120869587 120877188,120874756,120874060,120870538,120869945 Gene ID= ENSG00000119403.13 TPM= 2.72 Transcript Type= protein_coding chr9 120902393 120929173 120902393 120929173 - ENST00000540010.1@TRAF1 ENST00000540010.1 protein_coding 120929114,120926550,120925936,120923705,120914235,120913328,120911336,120909230,120902393 120929173,120926688,120926301,120923792,120914300,120913738,120911513,120909378,120905238 Gene ID= ENSG00000056558.10 TPM= 12.68 Transcript Type= protein_coding chr9 120952335 121050276 120952335 121050276 - ENST00000223642.2@C5 ENST00000223642.2 protein_coding 121050182,121046191,121043004,121037881,121034803,121032113,121030397,121027160,121025454,121023404,121021509,121019976,121017643,121017362,121016254,121015199,121013873,121008408,121006904,121005919,120997547,120996240,120991191,120989568,120989046,120982655,120981844,120980083,120976700,120974779,120971930,120970170,120969061,120963636,120962893,120962671,120961482,120960248,120957285,120953730,120952335 121050276,121046383,121043166,121037951,121034894,121032195,121030487,121027274,121025580,121023519,121021694,121020179,121017852,121017511,121016383,121015261,121014070,121008498,121006977,121006058,120997774,120996300,120991280,120989780,120989121,120982814,120981939,120980254,120976905,120974931,120971992,120970251,120969118,120963738,120962967,120962776,120961565,120960337,120957368,120953868,120952868 Gene ID= ENSG00000106804.7 TPM= 1.81 Transcript Type= protein_coding chr9 121121792 121161501 121121792 121161501 + transcript2181.chr9.nic@CNTRL transcript2181.chr9.nic protein_coding 121121792,121123931,121125716,121135806,121138545,121140641,121141381,121142091,121143903,121144843,121145244,121146108,121148672,121150170,121152485,121154721,121157470,121157740,121157983,121158855,121160143,121161283 121121951,121124084,121125936,121135982,121138679,121140786,121141588,121142270,121144082,121144959,121145385,121146256,121148861,121150483,121152693,121154913,121157600,121157880,121158109,121159019,121160302,121161501 Gene ID= ENSG00000119397.16 TPM= 2.72 Transcript Type= NA chr9 121299806 121332842 121299806 121332842 + transcript2227.chr9.nnic@GSN transcript2227.chr9.nnic protein_coding 121299806,121301924,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434 121300005,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842 Gene ID= ENSG00000148180.19 TPM= 42.62 Transcript Type= NA chr9 121268168 121332843 121268168 121332843 + ENST00000449733.7@GSN ENST00000449733.7 protein_coding 121268168,121281470,121282439,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434 121268219,121281562,121282550,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332843 Gene ID= ENSG00000148180.19 TPM= 20.58 Transcript Type= protein_coding chr9 121299793 121332842 121299793 121332842 + ENST00000373818.8@GSN ENST00000373818.8 protein_coding 121299793,121301963,121302911,121310684,121312339,121313934,121317086,121318406,121318665,121321268,121324554,121326512,121327308,121328891,121329238,121331388,121332434 121300005,121302167,121303065,121310845,121312488,121314023,121317218,121318494,121318880,121321401,121324644,121326682,121327482,121329015,121329315,121331448,121332842 Gene ID= ENSG00000148180.19 TPM= 961.44 Transcript Type= protein_coding chr9 121339077 121370205 121339077 121370205 - ENST00000286713.6@STOM ENST00000286713.6 protein_coding 121370127,121356053,121354601,121353220,121349120,121348015,121339077 121370205,121356156,121354673,121353302,121349323,121348149,121341408 Gene ID= ENSG00000148175.12 TPM= 578.64 Transcript Type= protein_coding chr9 121455040 121500027 121455040 121500027 - ENST00000481799.5@GGTA1P ENST00000481799.5 transcribed_unitary_pseudogene 121499650,121467843,121463293,121461252,121460104,121455040 121500027,121467931,121463328,121461317,121460219,121455841 Gene ID= ENSG00000204136.10 TPM= 15.39 Transcript Type= processed_transcript chr9 121455041 121499816 121455041 121499816 - ENST00000373793.3@GGTA1P ENST00000373793.3 transcribed_unitary_pseudogene 121499650,121479066,121467843,121463293,121461252,121460104,121455041 121499816,121479334,121467931,121463328,121461317,121460219,121455841 Gene ID= ENSG00000204136.10 TPM= 1.81 Transcript Type= processed_transcript chr9 121821928 122093606 121821928 122093606 - ENST00000321582.9@TTLL11 ENST00000321582.9 protein_coding 122092687,122039272,122031723,121989195,121974884,121974009,121870497,121860337,121821928 122093606,122039368,122031856,121989770,121974979,121974124,121870748,121860443,121822879 Gene ID= ENSG00000175764.14 TPM= 2.72 Transcript Type= protein_coding chr9 122144058 122159819 122144058 122159819 - ENST00000373768.3@NDUFA8 ENST00000373768.3 protein_coding 122159627,122152245,122148112,122144058 122159819,122152408,122148277,122144378 Gene ID= ENSG00000119421.6 TPM= 85.12 Transcript Type= protein_coding chr9 122144061 122159794 122144061 122159794 - transcript2282.chr9.nnic@NDUFA8 transcript2282.chr9.nnic protein_coding 122159627,122148112,122144061 122159794,122148277,122144378 Gene ID= ENSG00000119421.6 TPM= 3.62 Transcript Type= NA chr9 122202579 122228845 122202579 122228845 - ENST00000394319.8@LHX6 ENST00000394319.8 protein_coding 122228657,122227409,122226848,122226376,122217068,122214283,122213974,122213606,122209614,122202579 122228845,122227480,122227030,122226497,122217288,122214383,122214069,122213780,122209717,122204780 Gene ID= ENSG00000106852.15 TPM= 2.72 Transcript Type= protein_coding chr9 122237624 122264839 122237624 122264839 - ENST00000417201.3@RBM18 ENST00000417201.3 protein_coding 122264715,122261380,122251847,122247518,122245256,122237624 122264839,122261508,122251973,122247604,122245341,122242043 Gene ID= ENSG00000119446.13 TPM= 60.67 Transcript Type= protein_coding chr9 122264876 122323463 122264876 122323463 + transcript2285.chr9.nic@MRRF transcript2285.chr9.nic protein_coding 122264876,122270864,122280443,122285169,122286039,122291749,122313227,122322540 122264938,122271075,122280598,122285946,122286166,122291840,122313386,122323463 Gene ID= ENSG00000148187.17 TPM= 4.07 Transcript Type= NA chr9 122264882 122323463 122264882 122323463 + transcript2287.chr9.nic@MRRF transcript2287.chr9.nic protein_coding 122264882,122265462,122270864,122280443,122285169,122291749,122313227,122322540 122264938,122265780,122271075,122280598,122285287,122291840,122313386,122323463 Gene ID= ENSG00000148187.17 TPM= 3.17 Transcript Type= NA chr9 122818344 122828631 122818344 122828631 - ENST00000259467.8@PDCL ENST00000259467.8 protein_coding 122828471,122826616,122823016,122818344 122828631,122826792,122823197,122820636 Gene ID= ENSG00000136940.13 TPM= 46.18 Transcript Type= protein_coding chr9 122853745 122905341 122853745 122905341 - ENST00000423239.6@RC3H2 ENST00000423239.6 protein_coding 122905110,122897279,122892909,122890312,122883204,122880594,122879993,122879755,122877471,122865349,122859917,122858669,122857923,122855732,122855184,122854531,122854185,122853745 122905341,122897576,122893026,122890545,122883379,122880794,122880125,122879873,122877583,122865657,122860131,122859102,122858093,122855878,122855397,122854615,122854266,122854086 Gene ID= ENSG00000056586.15 TPM= 1.81 Transcript Type= protein_coding chr9 122908056 122913330 122908056 122913330 - ENST00000373659.3@ZBTB6 ENST00000373659.3 protein_coding 122913251,122908056 122913330,122912081 Gene ID= ENSG00000186130.4 TPM= 5.43 Transcript Type= protein_coding chr9 122941009 123104863 122941009 123104863 + transcript2308.chr9.nnic@RABGAP1 transcript2308.chr9.nnic protein_coding 122941009,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091,123103639 122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123103606,123104863 Gene ID= ENSG00000011454.16 TPM= 4.07 Transcript Type= NA chr9 122941009 123104866 122941009 123104866 + ENST00000373647.8@RABGAP1 ENST00000373647.8 protein_coding 122941009,122957011,122984485,122986215,122989297,122990056,122996041,122996539,122997259,122998597,123010354,123015543,123020309,123065348,123070350,123073552,123074285,123076245,123076634,123089758,123090275,123097741,123098715,123099478,123101566,123103091 122941093,122957209,122984719,122986419,122989471,122990213,122996151,122996605,122997361,122998766,123010528,123015636,123020459,123065461,123070424,123073677,123074428,123076286,123076762,123089850,123090385,123097845,123098798,123099549,123101763,123104866 Gene ID= ENSG00000011454.16 TPM= 13.13 Transcript Type= protein_coding chr9 123124708 123268611 123124708 123268611 - transcript2317.chr9.nic@STRBP transcript2317.chr9.nic protein_coding 123268436,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123124708 123268611,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673 Gene ID= ENSG00000165209.18 TPM= 23.09 Transcript Type= NA chr9 123124709 123268564 123124709 123268564 - ENST00000348403.9@STRBP ENST00000348403.9 protein_coding 123268436,123236830,123184132,123179007,123173677,123169902,123160977,123160367,123159096,123158332,123158012,123147778,123146855,123139529,123136381,123136041,123132845,123128214,123124709 123268564,123236966,123184298,123179227,123173842,123170046,123161068,123160462,123159207,123158429,123158123,123147870,123147054,123139687,123136515,123136181,123132968,123128258,123125673 Gene ID= ENSG00000165209.18 TPM= 14.04 Transcript Type= protein_coding chr9 124261450 124352484 124261450 124352484 + transcript2324.chr9.nic@NEK6 transcript2324.chr9.nic protein_coding 124261450,124301936,124312509,124313923,124321459,124326330,124327338,124339571,124347709,124350837 124261583,124302054,124312649,124313985,124321569,124326438,124327445,124339665,124347822,124352484 Gene ID= ENSG00000119408.16 TPM= 3.62 Transcript Type= NA chr9 124258251 124352438 124258251 124352438 + ENST00000545174.5@NEK6 ENST00000545174.5 protein_coding 124258251,124301936,124312509,124313923,124321459,124326330,124327338,124339571,124347709,124350837 124258361,124302054,124312649,124313985,124321569,124326438,124327445,124339665,124347822,124352438 Gene ID= ENSG00000119408.16 TPM= 3.62 Transcript Type= protein_coding chr9 124353466 124415439 124353466 124415439 - ENST00000259457.7@PSMB7 ENST00000259457.7 protein_coding 124415364,124414842,124413908,124412352,124405317,124384598,124356764,124353466 124415439,124414935,124414005,124412492,124405432,124384656,124356915,124353709 Gene ID= ENSG00000136930.12 TPM= 166.62 Transcript Type= protein_coding chr9 124481231 124504801 124481231 124504801 - transcript2349.chr9.nnic@NR5A1 transcript2349.chr9.nnic protein_coding 124504682,124503294,124503079,124500090,124493030,124491081,124481231 124504801,124503410,124503220,124500715,124493149,124491228,124483005 Gene ID= ENSG00000136931.9 TPM= 21.33 Transcript Type= NA chr9 124481231 124505212 124481231 124505212 - transcript2350.chr9.nnic@NR5A1 transcript2350.chr9.nnic protein_coding 124504943,124503294,124503079,124500090,124493030,124491081,124481231 124505212,124503410,124503220,124500715,124493149,124491228,124483005 Gene ID= ENSG00000136931.9 TPM= 21.33 Transcript Type= NA chr9 124481231 124507267 124481231 124507267 - transcript2354.chr9.nic@NR5A1 transcript2354.chr9.nic protein_coding 124506958,124503294,124503079,124500090,124493030,124491081,124481231 124507267,124503410,124503220,124500715,124493149,124491228,124483005 Gene ID= ENSG00000136931.9 TPM= 35.82 Transcript Type= NA chr9 124481237 124507430 124481237 124507430 - ENST00000373588.8@NR5A1 ENST00000373588.8 protein_coding 124507249,124503294,124503079,124500090,124493030,124491081,124481237 124507430,124503410,124503220,124500715,124493149,124491228,124483005 Gene ID= ENSG00000136931.9 TPM= 359.1 Transcript Type= protein_coding chr9 124857884 124861961 124857884 124861961 - ENST00000348462.5@RPL35 ENST00000348462.5 protein_coding 124861910,124861419,124860183,124857884 124861961,124861555,124860264,124858067 Gene ID= ENSG00000136942.14 TPM= 445.98 Transcript Type= protein_coding chr9 124857883 124861936 124857883 124861936 - ENST00000487431.1@RPL35 ENST00000487431.1 protein_coding 124861419,124860183,124857883 124861936,124860264,124858067 Gene ID= ENSG00000136942.14 TPM= 2.26 Transcript Type= retained_intron chr9 124862103 124877734 124862103 124877734 + transcript2373.chr9.nnic@ARPC5L transcript2373.chr9.nnic protein_coding 124862103,124863988,124869217,124873692,124874975,124876878 124862398,124864107,124869439,124873764,124875151,124877734 Gene ID= ENSG00000136950.13 TPM= 10.26 Transcript Type= NA chr9 124862130 124877733 124862130 124877733 + ENST00000353214.6@ARPC5L ENST00000353214.6 protein_coding 124862130,124863988,124868428,124873692,124874975,124876878 124862398,124864107,124869439,124873764,124875151,124877733 Gene ID= ENSG00000136950.13 TPM= 90.85 Transcript Type= protein_coding chr9 124872589 124877401 124872589 124877401 + ENST00000465124.1@ARPC5L ENST00000465124.1 protein_coding 124872589,124874975,124876878 124873764,124875151,124877401 Gene ID= ENSG00000136950.13 TPM= 1.2 Transcript Type= processed_transcript chr9 124878349 124941005 124878349 124941005 - transcript2377.chr9.nnic@GOLGA1 transcript2377.chr9.nnic protein_coding 124940840,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878349 124941005,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610 Gene ID= ENSG00000136935.13 TPM= 2.72 Transcript Type= NA chr9 124878357 124941099 124878357 124941099 - ENST00000373555.8@GOLGA1 ENST00000373555.8 protein_coding 124940971,124940106,124938577,124931316,124929216,124928188,124926709,124923095,124921723,124921129,124911901,124908377,124900452,124899329,124898549,124890389,124889434,124889143,124888253,124882510,124881784,124881171,124878357 124941099,124940155,124938866,124931406,124929290,124928285,124926741,124923223,124921892,124921240,124912026,124908472,124900547,124899478,124898644,124890478,124889536,124889303,124888396,124882569,124881954,124881257,124880610 Gene ID= ENSG00000136935.13 TPM= 17.21 Transcript Type= protein_coding chr9 125052133 125143528 125052133 125143528 - transcript2386.chr9.nnic@SCAI transcript2386.chr9.nnic protein_coding 125143385,125142633,125055876,125052133 125143528,125142677,125056007,125052595 Gene ID= ENSG00000173611.17 TPM= 2.72 Transcript Type= NA chr9 125146574 125189939 125146574 125189939 - ENST00000451402.5@PPP6C ENST00000451402.5 protein_coding 125189562,125188919,125171085,125160841,125158241,125153906,125153533,125146574 125189939,125188947,125171180,125160906,125158382,125153985,125153742,125149921 Gene ID= ENSG00000119414.11 TPM= 2.26 Transcript Type= protein_coding chr9 125146573 125189818 125146573 125189818 - ENST00000373547.8@PPP6C ENST00000373547.8 protein_coding 125189644,125171085,125160841,125158241,125153906,125153533,125146573 125189818,125171180,125160906,125158382,125153985,125153742,125149921 Gene ID= ENSG00000119414.11 TPM= 43.92 Transcript Type= protein_coding chr9 125234853 125241330 125234853 125241330 - ENST00000324460.6@HSPA5 ENST00000324460.6 protein_coding 125241005,125240676,125240172,125239421,125238941,125238590,125238141,125234853 125241330,125240907,125240309,125239533,125239331,125238827,125238308,125237154 Gene ID= ENSG00000044574.7 TPM= 685.5 Transcript Type= protein_coding chr9 125261788 125365009 125261788 125365009 + transcript2410.chr9.nic@GAPVD1 transcript2410.chr9.nic protein_coding 125261788,125268936,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177,125342219,125346819,125349390,125350295,125350713,125354654,125355644,125359420,125360528,125362606 125261959,125268984,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264,125342299,125346941,125349519,125350404,125350872,125354841,125355857,125359492,125360725,125365009 Gene ID= ENSG00000165219.21 TPM= 4.98 Transcript Type= NA chr9 125261820 125365009 125261820 125365009 + transcript2412.chr9.nic@GAPVD1 transcript2412.chr9.nic protein_coding 125261820,125295458,125298890,125301983,125305063,125307413,125307691,125312452,125321433,125323798,125326416,125330078,125331926,125332510,125337018,125337221,125341177,125342219,125346819,125349390,125350295,125350713,125354654,125355644,125359420,125360528,125362606 125261959,125295574,125299106,125302826,125305149,125307547,125307880,125312612,125321562,125323923,125326589,125330218,125332060,125332629,125337095,125337591,125341264,125342299,125346941,125349519,125350404,125350872,125354841,125355857,125359492,125360725,125365009 Gene ID= ENSG00000165219.21 TPM= 4.98 Transcript Type= NA chr9 125437394 125707234 125437394 125707234 - ENST00000265960.7@MAPKAP1 ENST00000265960.7 protein_coding 125706971,125672316,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394 125707234,125672643,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012 Gene ID= ENSG00000119487.16 TPM= 72.17 Transcript Type= protein_coding chr9 125437394 125707234 125437394 125707234 - ENST00000394063.5@MAPKAP1 ENST00000394063.5 protein_coding 125706971,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394 125707234,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012 Gene ID= ENSG00000119487.16 TPM= 11.65 Transcript Type= protein_coding chr9 125437393 125707238 125437393 125707238 - transcript2432.chr9.nic@MAPKAP1 transcript2432.chr9.nic protein_coding 125706971,125657651,125585555,125559633,125543059,125484443,125467972,125444501,125437393 125707238,125657799,125585727,125559809,125543168,125484583,125468109,125444598,125439012 Gene ID= ENSG00000119487.16 TPM= 5.77 Transcript Type= NA chr9 125437393 125484664 125437393 125484664 - transcript2437.chr9.nic@MAPKAP1 transcript2437.chr9.nic protein_coding 125484443,125467972,125444501,125437393 125484664,125468109,125444598,125439012 Gene ID= ENSG00000119487.16 TPM= 16.63 Transcript Type= NA chr9 125437394 125707212 125437394 125707212 - ENST00000373503.7@MAPKAP1 ENST00000373503.7 protein_coding 125706971,125669818,125657651,125585555,125559633,125543059,125506310,125484443,125467972,125444501,125437394 125707212,125669907,125657799,125585727,125559809,125543168,125506417,125484583,125468109,125444598,125439012 Gene ID= ENSG00000119487.16 TPM= 8.94 Transcript Type= protein_coding chr9 125437394 125707203 125437394 125707203 - ENST00000350766.7@MAPKAP1 ENST00000350766.7 protein_coding 125706971,125672316,125669818,125657651,125585555,125559633,125543059,125484443,125467972,125444501,125437394 125707203,125672643,125669907,125657799,125585727,125559809,125543168,125484583,125468109,125444598,125439012 Gene ID= ENSG00000119487.16 TPM= 22.82 Transcript Type= protein_coding chr9 125521468 125707231 125521468 125707231 - ENST00000394060.7@MAPKAP1 ENST00000394060.7 protein_coding 125706971,125672316,125669818,125657651,125585555,125559633,125543059,125521468 125707231,125672643,125669907,125657799,125585727,125559809,125543168,125521765 Gene ID= ENSG00000119487.16 TPM= 6.34 Transcript Type= protein_coding chr9 125538283 125542435 125538283 125542435 + transcript2439.chr9.nnic@NA transcript2439.chr9.nnic NA 125538283,125539337,125541135 125538364,125539449,125542435 Gene ID= novel_gene_chr9_2440 TPM= 1.81 Transcript Type= NA chr9 125747920 125967381 125747920 125967381 + transcript2464.chr9.nic@PBX3 transcript2464.chr9.nic protein_coding 125747920,125915686,125929655,125935472,125960684,125962102,125963012,125965831 125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967381 Gene ID= ENSG00000167081.16 TPM= 15.96 Transcript Type= NA chr9 125747920 125967381 125747920 125967381 + transcript2469.chr9.nic@PBX3 transcript2469.chr9.nic protein_coding 125747920,125915686,125929655,125935472,125960684,125963012,125965831 125748623,125915927,125929845,125935607,125960849,125963101,125967381 Gene ID= ENSG00000167081.16 TPM= 9.33 Transcript Type= NA chr9 125747438 125967377 125747438 125967377 + ENST00000373489.9@PBX3 ENST00000373489.9 protein_coding 125747438,125748550,125915686,125929655,125935472,125960684,125962102,125963012,125965831 125747653,125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967377 Gene ID= ENSG00000167081.16 TPM= 21.4 Transcript Type= protein_coding chr9 125747345 125967377 125747345 125967377 + ENST00000342287.9@PBX3 ENST00000342287.9 protein_coding 125747345,125748550,125915686,125929655,125935472,125960684,125963012,125965831 125747653,125748623,125915927,125929845,125935607,125960849,125963101,125967377 Gene ID= ENSG00000167081.16 TPM= 21.1 Transcript Type= protein_coding chr9 125747374 125967377 125747374 125967377 + ENST00000373487.8@PBX3 ENST00000373487.8 protein_coding 125747374,125748550,125915686,125929655,125935472,125949378,125960684,125962102,125963012,125965831 125747653,125748623,125915927,125929845,125935607,125949440,125960849,125962214,125963101,125967377 Gene ID= ENSG00000167081.16 TPM= 1.18 Transcript Type= protein_coding chr9 125748199 125967377 125748199 125967377 + ENST00000447726.6@PBX3 ENST00000447726.6 protein_coding 125748199,125748550,125915686,125929655,125935472,125960684,125962102,125963012,125965831 125748428,125748623,125915927,125929845,125935607,125960849,125962214,125963101,125967377 Gene ID= ENSG00000167081.16 TPM= 5.1 Transcript Type= protein_coding chr9 126326660 126456464 126326660 126456464 + transcript2473.chr9.nnic@MVB12B transcript2473.chr9.nnic protein_coding 126326660,126340508,126381064,126386562,126392066,126395575,126421854,126455209 126327010,126340630,126381171,126386658,126392195,126395697,126421948,126456464 Gene ID= ENSG00000196814.14 TPM= 3.62 Transcript Type= NA chr9 126326849 126507041 126326849 126507041 + ENST00000361171.7@MVB12B ENST00000361171.7 protein_coding 126326849,126340508,126381064,126386562,126392066,126395575,126421854,126481369,126483973,126503177 126327010,126340630,126381171,126386658,126392195,126395697,126421948,126481424,126484032,126507041 Gene ID= ENSG00000196814.14 TPM= 4.53 Transcript Type= protein_coding chr9 126805015 126838210 126805015 126838210 + ENST00000373464.4@ZBTB43 ENST00000373464.4 protein_coding 126805015,126808793,126832487 126805132,126808915,126838210 Gene ID= ENSG00000169155.9 TPM= 4.53 Transcript Type= protein_coding chr9 126860665 126885878 126860665 126885878 + ENST00000319119.4@ZBTB34 ENST00000319119.4 protein_coding 126860665,126879390 126860739,126885878 Gene ID= ENSG00000177125.5 TPM= 5.43 Transcript Type= protein_coding chr9 127087332 127122883 127087332 127122883 - ENST00000373425.7@ANGPTL2 ENST00000373425.7 protein_coding 127122315,127107915,127093733,127091670,127087332 127122883,127108780,127093926,127091940,127089138 Gene ID= ENSG00000136859.9 TPM= 14.49 Transcript Type= protein_coding chr9 127224456 127393659 127224456 127393659 + transcript2484.chr9.nic@GARNL3 transcript2484.chr9.nic protein_coding 127224456,127243079,127264952,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127348924,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083 127224691,127243249,127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127349035,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127393659 Gene ID= ENSG00000136895.18 TPM= 17.43 Transcript Type= NA chr9 127225199 127394051 127225199 127394051 + transcript2485.chr9.nic@GARNL3 transcript2485.chr9.nic protein_coding 127225199,127243079,127264952,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127348924,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083 127225403,127243249,127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127349035,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127394051 Gene ID= ENSG00000136895.18 TPM= 22.87 Transcript Type= NA chr9 127224456 127393537 127224456 127393537 + transcript2487.chr9.nic@GARNL3 transcript2487.chr9.nic protein_coding 127224456,127243079,127264952,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083 127224691,127243249,127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127393537 Gene ID= ENSG00000136895.18 TPM= 2.04 Transcript Type= NA chr9 127225256 127393659 127225256 127393659 + transcript2488.chr9.nic@GARNL3 transcript2488.chr9.nic protein_coding 127225256,127243079,127264952,127291168,127311636,127313441,127318063,127320715,127325069,127332274,127333023,127335230,127336128,127338116,127339645,127342219,127344235,127345403,127353846,127354294,127355297,127357219,127365300,127383438,127385027,127387193,127388904,127390641,127393083 127225403,127243249,127265021,127291242,127311735,127313559,127318127,127320778,127325095,127332349,127333121,127335333,127336236,127338161,127339751,127342334,127344339,127345477,127353944,127354410,127355472,127357377,127365366,127383545,127385145,127387331,127389119,127390767,127393659 Gene ID= ENSG00000136895.18 TPM= 2.04 Transcript Type= NA chr9 127397135 127408423 127397135 127408423 + transcript2503.chr9.nic@SLC2A8 transcript2503.chr9.nic protein_coding 127397135,127397376,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407112,127408150 127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407530,127408423 Gene ID= ENSG00000136856.17 TPM= 4.53 Transcript Type= NA chr9 127397135 127408233 127397135 127408233 + transcript2516.chr9.nic@SLC2A8 transcript2516.chr9.nic protein_coding 127397135,127397376,127399907,127402557,127403660,127403959,127404818,127405420,127407112 127397286,127397538,127400006,127402753,127403803,127404067,127404991,127405565,127408233 Gene ID= ENSG00000136856.17 TPM= 20.15 Transcript Type= NA chr9 127397142 127407898 127397142 127407898 + ENST00000373371.7@SLC2A8 ENST00000373371.7 protein_coding 127397142,127397376,127397905,127399907,127402557,127403660,127403959,127404818,127405420,127407112 127397286,127397538,127398111,127400006,127402753,127403803,127404067,127404991,127405565,127407898 Gene ID= ENSG00000136856.17 TPM= 93.5 Transcript Type= protein_coding chr9 127397138 127407855 127397138 127407855 + ENST00000610552.4@SLC2A8 ENST00000610552.4 protein_coding 127397138,127399907,127402557,127403660,127403959,127404818,127405420,127407112 127397286,127400006,127402753,127403803,127404067,127404991,127405565,127407855 Gene ID= ENSG00000136856.17 TPM= 5.66 Transcript Type= protein_coding chr9 127424374 127445371 127424374 127445371 + ENST00000612342.4@ZNF79 ENST00000612342.4 protein_coding 127424374,127428832,127435090,127435908,127444029 127424910,127428920,127435216,127436003,127445371 Gene ID= ENSG00000196152.10 TPM= 2.72 Transcript Type= protein_coding chr9 127424382 127445372 127424382 127445372 + ENST00000342483.5@ZNF79 ENST00000342483.5 protein_coding 127424382,127428832,127435090,127435908,127444029 127424803,127428920,127435216,127436003,127445372 Gene ID= ENSG00000196152.10 TPM= 2.72 Transcript Type= protein_coding chr9 127447674 127451405 127447674 127451405 - ENST00000497825.5@RPL12 ENST00000497825.5 protein_coding 127451050,127450731,127449610,127449281,127448337,127447877,127447674 127451405,127450804,127449708,127449362,127448423,127447989,127447726 Gene ID= ENSG00000197958.12 TPM= 9.96 Transcript Type= processed_transcript chr9 127447674 127451405 127447674 127451405 - ENST00000361436.9@RPL12 ENST00000361436.9 protein_coding 127451281,127450731,127449610,127449281,127448337,127447877,127447674 127451405,127450804,127449708,127449362,127448423,127447989,127447726 Gene ID= ENSG00000197958.12 TPM= 408.4 Transcript Type= protein_coding chr9 127451513 127503499 127451513 127503499 + ENST00000323301.8@LRSAM1 ENST00000323301.8 protein_coding 127451513,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774 127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503499 Gene ID= ENSG00000148356.13 TPM= 21.21 Transcript Type= protein_coding chr9 127451486 127503501 127451486 127503501 + ENST00000300417.10@LRSAM1 ENST00000300417.10 protein_coding 127451486,127451929,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774 127451669,127452084,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503501 Gene ID= ENSG00000148356.13 TPM= 80.07 Transcript Type= protein_coding chr9 127452255 127503499 127452255 127503499 + ENST00000373322.1@LRSAM1 ENST00000373322.1 protein_coding 127452255,127454496,127454998,127455576,127457316,127459003,127461173,127462252,127467740,127473801,127478934,127479383,127479839,127481183,127482950,127485736,127487676,127489444,127491215,127492802,127495320,127495964,127497253,127501010,127502774 127452299,127454599,127455054,127455620,127457393,127459071,127461257,127462373,127467830,127473931,127478963,127479505,127479978,127481227,127483020,127485835,127487763,127489518,127491295,127492897,127495418,127496095,127497334,127501143,127503499 Gene ID= ENSG00000148356.13 TPM= 2.19 Transcript Type= protein_coding chr9 127505338 127569088 127505338 127569088 - transcript2554.chr9.nnic@FAM129B transcript2554.chr9.nnic protein_coding 127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127506196,127505338 127569088,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431,127505612 Gene ID= ENSG00000136830.11 TPM= 6.79 Transcript Type= NA chr9 127505343 127569088 127505343 127569088 - ENST00000373312.3@FAM129B ENST00000373312.3 protein_coding 127568820,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127505343 127569088,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431 Gene ID= ENSG00000136830.11 TPM= 260.34 Transcript Type= protein_coding chr9 127505339 127578989 127505339 127578989 - ENST00000373314.7@FAM129B ENST00000373314.7 protein_coding 127578922,127531648,127527194,127525058,127523679,127517826,127517112,127516857,127510146,127508976,127508422,127508093,127507867,127505339 127578989,127531778,127527322,127525163,127523846,127517941,127517216,127517019,127510333,127509131,127508538,127508200,127507978,127507431 Gene ID= ENSG00000136830.11 TPM= 17.66 Transcript Type= protein_coding chr9 127612283 127692716 127612283 127692716 + ENST00000373299.4@STXBP1 ENST00000373299.4 protein_coding 127612283,127651603,127653715,127658375,127660030,127661102,127663205,127665247,127666166,127668080,127669898,127672051,127673181,127675804,127676644,127678431,127680157,127682406,127690775 127612440,127651652,127653796,127658451,127660108,127661205,127663353,127665331,127666296,127668187,127669958,127672116,127673261,127675942,127676753,127678532,127680242,127682560,127692716 Gene ID= ENSG00000136854.19 TPM= 33.51 Transcript Type= protein_coding chr9 127713949 127715657 127713949 127715657 - ENST00000543175.4@PTRH1 ENST00000543175.4 protein_coding 127715544,127714975,127714603,127714379,127713949 127715657,127715194,127714702,127714424,127714282 Gene ID= ENSG00000187024.14 TPM= 13.58 Transcript Type= protein_coding chr9 127713972 127715604 127713972 127715604 - ENST00000456267.5@PTRH1 ENST00000456267.5 protein_coding 127715544,127714975,127714603,127714379,127713972 127715604,127715194,127714702,127714424,127714189 Gene ID= ENSG00000187024.14 TPM= 1.81 Transcript Type= protein_coding chr9 127731524 127735317 127731524 127735317 - ENST00000373284.9@TOR2A ENST00000373284.9 protein_coding 127735120,127734299,127733385,127732564,127731524 127735317,127734564,127733560,127732691,127732278 Gene ID= ENSG00000160404.17 TPM= 18.11 Transcript Type= protein_coding chr9 127738317 127771438 127738317 127771438 - ENST00000373277.8@SH2D3C ENST00000373277.8 protein_coding 127771186,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738317 127771438,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921 Gene ID= ENSG00000095370.19 TPM= 17.21 Transcript Type= protein_coding chr9 127738318 127762418 127738318 127762418 - ENST00000429553.5@SH2D3C ENST00000429553.5 protein_coding 127762121,127761611,127751172,127749211,127747147,127744564,127742849,127741788,127740258,127739682,127738318 127762418,127761650,127751300,127749665,127747271,127745099,127742964,127741959,127740369,127739888,127738921 Gene ID= ENSG00000095370.19 TPM= 5.43 Transcript Type= protein_coding chr9 127785225 127790106 127785225 127790106 + transcript2650.chr9.nnic@CDK9 transcript2650.chr9.nnic protein_coding 127785225,127785581,127786701,127787518,127787947,127788214,127788544,127789178 127785459,127786240,127786782,127787608,127788113,127788385,127788692,127790106 Gene ID= ENSG00000136807.13 TPM= 157.56 Transcript Type= NA chr9 127785527 127790103 127785527 127790103 + transcript2654.chr9.nic@CDK9 transcript2654.chr9.nic protein_coding 127785527,127786701,127787518,127787947,127788214,127789178 127786240,127786782,127787608,127788113,127788692,127790103 Gene ID= ENSG00000136807.13 TPM= 12.22 Transcript Type= NA chr9 127786368 127790103 127786368 127790103 + transcript2657.chr9.nic@CDK9 transcript2657.chr9.nic protein_coding 127786368,127787518,127787947,127788214,127788544,127789178 127786782,127787608,127788113,127788385,127788692,127790103 Gene ID= ENSG00000136807.13 TPM= 19.02 Transcript Type= NA chr9 127786049 127790787 127786049 127790787 + ENST00000373264.4@CDK9 ENST00000373264.4 protein_coding 127786049,127786701,127787518,127787947,127788214,127788544,127789178 127786240,127786782,127787608,127788113,127788385,127788692,127790787 Gene ID= ENSG00000136807.13 TPM= 194.69 Transcript Type= protein_coding chr9 127802719 127817730 127802719 127817730 + transcript2598.chr9.nic@FPGS transcript2598.chr9.nic protein_coding 127802719,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195,127814208 127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127813323,127817730 Gene ID= ENSG00000136877.14 TPM= 43.01 Transcript Type= NA chr9 127802858 127814081 127802858 127814081 + ENST00000630236.2@FPGS ENST00000630236.2 protein_coding 127802858,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808800,127809684,127810031,127810945,127813195 127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808889,127809834,127810106,127811011,127814081 Gene ID= ENSG00000136877.14 TPM= 17.88 Transcript Type= protein_coding chr9 127802875 127814069 127802875 127814069 + ENST00000373247.6@FPGS ENST00000373247.6 protein_coding 127802875,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195 127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814069 Gene ID= ENSG00000136877.14 TPM= 201.56 Transcript Type= protein_coding chr9 127802918 127814058 127802918 127814058 + ENST00000460181.5@FPGS ENST00000460181.5 protein_coding 127802918,127804285,127804499,127804636,127806992,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195 127803062,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814058 Gene ID= ENSG00000136877.14 TPM= 8.22 Transcript Type= processed_transcript chr9 127803208 127814059 127803208 127814059 + ENST00000373225.7@FPGS ENST00000373225.7 protein_coding 127803208,127804285,127804499,127804636,127806973,127807209,127807421,127807586,127808234,127808558,127808800,127809684,127810031,127810945,127813195 127803404,127804413,127804552,127804700,127807087,127807286,127807482,127807688,127808311,127808705,127808889,127809834,127810106,127811011,127814059 Gene ID= ENSG00000136877.14 TPM= 56.67 Transcript Type= protein_coding chr9 127815013 127847167 127815013 127847167 - ENST00000480266.5@ENG ENST00000480266.5 protein_coding 127846943,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815013 127847167,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806 Gene ID= ENSG00000106991.13 TPM= 42.29 Transcript Type= protein_coding chr9 127815012 127854756 127815012 127854756 - ENST00000373203.8@ENG ENST00000373203.8 protein_coding 127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815943,127815012 127854756,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053,127815806 Gene ID= ENSG00000106991.13 TPM= 748.61 Transcript Type= protein_coding chr9 127815017 127854636 127815017 127854636 - ENST00000344849.4@ENG ENST00000344849.4 protein_coding 127854289,127843094,127829687,127826510,127825695,127825231,127824800,127824304,127819900,127819622,127818716,127818120,127817149,127815017 127854636,127843245,127829827,127826672,127825860,127825357,127824974,127824446,127820037,127819660,127818832,127818377,127817203,127816053 Gene ID= ENSG00000106991.13 TPM= 4.53 Transcript Type= protein_coding chr9 127866480 127877743 127866480 127877743 - ENST00000373176.5@AK1 ENST00000373176.5 protein_coding 127877623,127874611,127873026,127872690,127871823,127868321,127866480 127877743,127874649,127873061,127872853,127871939,127868512,127868076 Gene ID= ENSG00000106992.17 TPM= 102.96 Transcript Type= protein_coding chr9 127866490 127899686 127866490 127899686 - transcript2662.chr9.nic@AL157935.2 transcript2662.chr9.nic processed_transcript 127899503,127897956,127896242,127894512,127890637,127887484,127885186,127874611,127873026,127872690,127871823,127868321,127866490 127899686,127898010,127896332,127894691,127891043,127887591,127886788,127874649,127873061,127872853,127871939,127868512,127868076 Gene ID= ENSG00000257524.5 TPM= 79.87 Transcript Type= NA chr9 127885322 127899655 127885322 127899655 - ENST00000373144.7@ST6GALNAC6 ENST00000373144.7 protein_coding 127899503,127896242,127894512,127890637,127887484,127885322 127899655,127896332,127894691,127891043,127887591,127886788 Gene ID= ENSG00000160408.14 TPM= 83.31 Transcript Type= protein_coding chr9 127885322 127897408 127885322 127897408 - ENST00000373141.5@ST6GALNAC6 ENST00000373141.5 protein_coding 127897238,127896242,127894512,127890637,127887484,127885322 127897408,127896332,127894691,127891043,127887591,127886788 Gene ID= ENSG00000160408.14 TPM= 7.24 Transcript Type= protein_coding chr9 127885326 127899574 127885326 127899574 - ENST00000485320.5@ST6GALNAC6 ENST00000485320.5 protein_coding 127899503,127897956,127896242,127894512,127890656,127887484,127885326 127899574,127898010,127896332,127894691,127891043,127887591,127886788 Gene ID= ENSG00000160408.14 TPM= 5.43 Transcript Type= processed_transcript chr9 127907879 127917049 127907879 127917049 - transcript2678.chr9.nnic@ST6GALNAC4 transcript2678.chr9.nnic protein_coding 127916826,127916408,127914656,127912268,127909951,127908318,127907879 127917049,127916494,127914841,127912680,127910058,127908581,127908168 Gene ID= ENSG00000136840.18 TPM= 30.34 Transcript Type= NA chr9 127907879 127917049 127907879 127917049 - transcript2679.chr9.nnic@ST6GALNAC4 transcript2679.chr9.nnic protein_coding 127916826,127916408,127914656,127912268,127909951,127908216,127907879 127917049,127916494,127914841,127912680,127910058,127908581,127908171 Gene ID= ENSG00000136840.18 TPM= 4.53 Transcript Type= NA chr9 127907879 127917028 127907879 127917028 - transcript2683.chr9.nnic@ST6GALNAC4 transcript2683.chr9.nnic protein_coding 127916826,127914656,127912268,127909951,127908318,127907879 127917028,127914841,127912680,127910058,127908581,127908168 Gene ID= ENSG00000136840.18 TPM= 3.17 Transcript Type= NA chr9 127907886 127917026 127907886 127917026 - ENST00000335791.9@ST6GALNAC4 ENST00000335791.9 protein_coding 127916826,127916408,127914656,127912268,127909951,127907886 127917026,127916494,127914841,127912680,127910058,127908581 Gene ID= ENSG00000136840.18 TPM= 5.43 Transcript Type= protein_coding chr9 127935099 127937826 127935099 127937826 - ENST00000495270.1@DPM2 ENST00000495270.1 protein_coding 127937818,127936553,127935099 127937826,127937523,127935780 Gene ID= ENSG00000136908.17 TPM= 10.87 Transcript Type= retained_intron chr9 127940878 127981081 127940878 127981081 - transcript2699.chr9.nnic@FAM102A transcript2699.chr9.nnic protein_coding 127979992,127953805,127953575,127948368,127948071,127945649,127945367,127944777,127944615,127940878 127981081,127953925,127953604,127948414,127948225,127945753,127945562,127944898,127944684,127943237 Gene ID= ENSG00000167106.11 TPM= 18.72 Transcript Type= NA chr9 127940579 127980513 127940579 127980513 - ENST00000373095.5@FAM102A ENST00000373095.5 protein_coding 127979992,127953805,127953575,127950423,127948368,127948071,127945649,127945367,127944777,127944615,127940579 127980513,127953925,127953604,127950539,127948414,127948225,127945753,127945562,127944898,127944684,127943237 Gene ID= ENSG00000167106.11 TPM= 86.63 Transcript Type= protein_coding chr9 127940881 127950722 127940881 127950722 - ENST00000373084.8@FAM102A ENST00000373084.8 protein_coding 127950423,127948368,127948071,127945649,127945367,127944777,127944615,127940881 127950722,127948414,127948225,127945753,127945562,127944898,127944684,127943237 Gene ID= ENSG00000167106.11 TPM= 16 Transcript Type= protein_coding chr9 128061232 128067352 128061232 128067352 - transcript2703.chr9.nic@NAIF1 transcript2703.chr9.nic protein_coding 128066591,128063374,128061232 128067352,128063900,128061826 Gene ID= ENSG00000171169.8 TPM= 9.51 Transcript Type= NA chr9 128061232 128067352 128061232 128067352 - transcript2704.chr9.nnic@NAIF1 transcript2704.chr9.nnic protein_coding 128066868,128063374,128061232 128067352,128063900,128061826 Gene ID= ENSG00000171169.8 TPM= 2.26 Transcript Type= NA chr9 128061233 128067321 128061233 128067321 - ENST00000373078.4@NAIF1 ENST00000373078.4 protein_coding 128066591,128061233 128067321,128063900 Gene ID= ENSG00000171169.8 TPM= 6.34 Transcript Type= protein_coding chr9 128098304 128109245 128098304 128109245 + ENST00000373064.9@SLC25A25 ENST00000373064.9 protein_coding 128098304,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260 128098725,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109245 Gene ID= ENSG00000148339.12 TPM= 49.51 Transcript Type= protein_coding chr9 128105187 128109246 128105187 128109246 + transcript2715.chr9.nic@SLC25A25 transcript2715.chr9.nic protein_coding 128105187,128106150,128106353,128107029,128107260 128105881,128106257,128106520,128107179,128109246 Gene ID= ENSG00000148339.12 TPM= 6.95 Transcript Type= NA chr9 128068201 128109244 128068201 128109244 + ENST00000373068.6@SLC25A25 ENST00000373068.6 protein_coding 128068201,128101096,128101309,128102370,128103681,128105729,128106150,128106353,128107029,128107260 128068580,128101222,128101396,128102481,128103839,128105881,128106257,128106520,128107179,128109244 Gene ID= ENSG00000148339.12 TPM= 37.73 Transcript Type= protein_coding chr9 128120692 128127735 128120692 128127735 - transcript2716.chr9.nic@PTGES2 transcript2716.chr9.nic protein_coding 128127439,128125244,128124779,128124492,128123702,128122934,128122362,128120692 128127735,128125441,128124871,128124550,128123851,128123134,128122479,128121273 Gene ID= ENSG00000148334.14 TPM= 9.96 Transcript Type= NA chr9 128120693 128128462 128120693 128128462 - ENST00000338961.10@PTGES2 ENST00000338961.10 protein_coding 128127439,128125244,128124492,128123702,128122934,128122362,128120693 128128462,128125441,128124550,128123851,128123134,128122479,128121273 Gene ID= ENSG00000148334.14 TPM= 259.44 Transcript Type= protein_coding chr9 128120692 128128208 128120692 128128208 - transcript2726.chr9.nic@PTGES2 transcript2726.chr9.nic protein_coding 128127439,128125244,128124492,128123702,128122934,128122362,128120692 128128208,128125441,128124550,128123851,128123134,128122646,128121273 Gene ID= ENSG00000148334.14 TPM= 6.64 Transcript Type= NA chr9 128120692 128127954 128120692 128127954 - transcript2730.chr9.nic@PTGES2 transcript2730.chr9.nic protein_coding 128127439,128125244,128124492,128123702,128122362,128120692 128127954,128125441,128124550,128123851,128123134,128121273 Gene ID= ENSG00000148334.14 TPM= 12.98 Transcript Type= NA chr9 128120723 128127717 128120723 128127717 - ENST00000496594.5@PTGES2 ENST00000496594.5 protein_coding 128127439,128125244,128124779,128124492,128123702,128122362,128120723 128127717,128125441,128124871,128124550,128123851,128123134,128121273 Gene ID= ENSG00000148334.14 TPM= 2.72 Transcript Type= retained_intron chr9 128160260 128163928 128160260 128163928 + ENST00000372994.1@C9orf16 ENST00000372994.1 protein_coding 128160260,128163443 128160486,128163928 Gene ID= ENSG00000171159.4 TPM= 303.36 Transcript Type= protein_coding chr9 128160314 128163890 128160314 128163890 + ENST00000492588.1@C9orf16 ENST00000492588.1 protein_coding 128160314,128162004,128163443 128160486,128162952,128163890 Gene ID= ENSG00000171159.4 TPM= 1.81 Transcript Type= processed_transcript chr9 128166053 128191608 128166053 128191608 - transcript2743.chr9.nic@CIZ1 transcript2743.chr9.nic protein_coding 128191432,128190688,128190329,128187863,128185547,128180721,128180415,128179073,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166053 128191608,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406 Gene ID= ENSG00000148337.20 TPM= 13.96 Transcript Type= NA chr9 128166053 128191608 128166053 128191608 - transcript2746.chr9.nic@CIZ1 transcript2746.chr9.nic protein_coding 128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166053 128191608,128190862,128190444,128187934,128185776,128180799,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406 Gene ID= ENSG00000148337.20 TPM= 16.07 Transcript Type= NA chr9 128166073 128191589 128166073 128191589 - ENST00000372938.9@CIZ1 ENST00000372938.9 protein_coding 128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166073 128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406 Gene ID= ENSG00000148337.20 TPM= 93.95 Transcript Type= protein_coding chr9 128166066 128191589 128166066 128191589 - ENST00000357558.9@CIZ1 ENST00000357558.9 protein_coding 128191432,128190688,128190329,128187863,128185547,128180721,128180415,128178989,128178709,128178369,128177566,128176351,128170020,128169406,128169052,128167095,128166759,128166066 128191589,128190862,128190444,128187934,128185776,128180814,128180523,128179415,128178904,128178490,128177763,128176475,128170107,128169519,128169201,128167164,128166880,128166406 Gene ID= ENSG00000148337.20 TPM= 1.29 Transcript Type= protein_coding chr9 128203345 128255242 128203345 128255242 + transcript2764.chr9.nic@DNM1 transcript2764.chr9.nic protein_coding 128203345,128218231,128218582,128219049,128219988,128220181,128222197,128222461,128222793,128224251,128234021,128239445,128239728,128239985,128242232,128246394,128247375,128247924,128248583,128250115,128250725,128254006 128203631,128218304,128218731,128219252,128220086,128220341,128222339,128222596,128222860,128224389,128234107,128239515,128239779,128239996,128242345,128246503,128247486,128247935,128248753,128250356,128250940,128255242 Gene ID= ENSG00000106976.20 TPM= 5.89 Transcript Type= NA chr9 128203397 128255244 128203397 128255244 + ENST00000628346.2@DNM1 ENST00000628346.2 protein_coding 128203397,128218231,128218582,128219049,128219988,128220181,128222197,128222461,128222793,128224251,128234021,128239445,128239728,128242232,128246394,128247375,128247924,128248583,128250115,128250725,128254006 128203631,128218304,128218731,128219252,128220086,128220341,128222339,128222596,128222860,128224389,128234107,128239515,128239779,128242345,128246503,128247486,128247935,128248753,128250356,128250940,128255244 Gene ID= ENSG00000106976.20 TPM= 6.79 Transcript Type= protein_coding chr9 128255827 128275997 128255827 128275997 - transcript2771.chr9.nic@GOLGA2 transcript2771.chr9.nic protein_coding 128275893,128273850,128272785,128268420,128268117,128267934,128267458,128267194,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255827 128275997,128273972,128272865,128268524,128268160,128267997,128267517,128267274,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281 Gene ID= ENSG00000167110.17 TPM= 10.26 Transcript Type= NA chr9 128255827 128275997 128255827 128275997 - transcript2774.chr9.nic@GOLGA2 transcript2774.chr9.nic protein_coding 128275893,128273850,128272785,128268420,128268117,128267934,128267458,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255827 128275997,128273972,128272865,128268524,128268160,128267997,128267517,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281 Gene ID= ENSG00000167110.17 TPM= 10.26 Transcript Type= NA chr9 128255827 128275997 128255827 128275997 - transcript2775.chr9.nic@GOLGA2 transcript2775.chr9.nic protein_coding 128275893,128273850,128268420,128268117,128267934,128267458,128266287,128265970,128265788,128265585,128263034,128262563,128261668,128261454,128261172,128260465,128260076,128259167,128259007,128258455,128257980,128257790,128257601,128257369,128255827 128275997,128273972,128268524,128268160,128267997,128267517,128266325,128266020,128265881,128265691,128263092,128262704,128261757,128261561,128261259,128260802,128260189,128259391,128259082,128258570,128258198,128257892,128257707,128257525,128257281 Gene ID= ENSG00000167110.17 TPM= 6.64 Transcript Type= NA chr9 128276244 128288989 128276244 128288989 + ENST00000418976.1@SWI5 ENST00000418976.1 protein_coding 128276244,128276707,128284510,128285939,128288652 128276402,128276755,128284631,128286033,128288989 Gene ID= ENSG00000175854.11 TPM= 20.83 Transcript Type= protein_coding chr9 128305161 128322742 128305161 128322742 - ENST00000372890.5@TRUB2 ENST00000372890.5 protein_coding 128322300,128321599,128317152,128315567,128313808,128311529,128310887,128305161 128322742,128321730,128317226,128315628,128313889,128311601,128311023,128309875 Gene ID= ENSG00000167112.9 TPM= 105.95 Transcript Type= protein_coding chr9 128322840 128334071 128322840 128334071 + transcript2793.chr9.nnic@COQ4 transcript2793.chr9.nnic protein_coding 128322840,128323016,128325779,128332850,128333474 128322928,128323147,128325881,128332943,128334071 Gene ID= ENSG00000167113.10 TPM= 2.72 Transcript Type= NA chr9 128322536 128334072 128322536 128334072 + ENST00000300452.7@COQ4 ENST00000300452.7 protein_coding 128322536,128323016,128325143,128325779,128332153,128332850,128333474 128322928,128323147,128325239,128325881,128332282,128332943,128334072 Gene ID= ENSG00000167113.10 TPM= 97.8 Transcript Type= protein_coding chr9 128322544 128323586 128322544 128323586 + ENST00000609948.1@COQ4 ENST00000609948.1 protein_coding 128322544,128323016 128322928,128323586 Gene ID= ENSG00000167113.10 TPM= 5.43 Transcript Type= protein_coding chr9 128340496 128361469 128340496 128361469 + transcript2799.chr9.nnic@SLC27A4 transcript2799.chr9.nnic protein_coding 128340496,128340754,128343127,128345155,128348545,128350312,128350484,128352638,128353025,128353415,128355053,128355398,128355650,128360334 128340617,128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353234,128353541,128355190,128355562,128355796,128361469 Gene ID= ENSG00000167114.12 TPM= 13.13 Transcript Type= NA chr9 128340555 128361222 128340555 128361222 + transcript2804.chr9.nnic@SLC27A4 transcript2804.chr9.nnic protein_coding 128340555,128343127,128345155,128348545,128350312,128350484,128352638,128353415,128355053,128355398,128355650,128360334 128340838,128343293,128345549,128348703,128350381,128350575,128352747,128353541,128355190,128355562,128355796,128361222 Gene ID= ENSG00000167114.12 TPM= 3.17 Transcript Type= NA chr9 128371319 128392016 128371319 128392016 + ENST00000372853.8@URM1 ENST00000372853.8 protein_coding 128371319,128378036,128387816,128389261,128389666 128371415,128378106,128387897,128389309,128392016 Gene ID= ENSG00000167118.10 TPM= 67.92 Transcript Type= protein_coding chr9 128420480 128437347 128420480 128437347 + ENST00000372838.8@CERCAM ENST00000372838.8 protein_coding 128420480,128422868,128423146,128424138,128424410,128428302,128428757,128428930,128431171,128434102,128434410,128435653,128436849 128421074,128422978,128423263,128424272,128424614,128428421,128428833,128429036,128431303,128434229,128434613,128435905,128437347 Gene ID= ENSG00000167123.18 TPM= 38.94 Transcript Type= protein_coding chr9 128456126 128500959 128456126 128500959 + transcript2812.chr9.nic@ODF2 transcript2812.chr9.nic protein_coding 128456126,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067 128456255,128459657,128460666,128461010,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128500959 Gene ID= ENSG00000136811.16 TPM= 8.38 Transcript Type= NA chr9 128456006 128501292 128456006 128501292 + ENST00000351030.7@ODF2 ENST00000351030.7 protein_coding 128456006,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067 128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128501292 Gene ID= ENSG00000136811.16 TPM= 16.53 Transcript Type= protein_coding chr9 128456126 128500959 128456126 128500959 + transcript2818.chr9.nic@ODF2 transcript2818.chr9.nic protein_coding 128456126,128459567,128460513,128460942,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067 128456255,128459657,128460666,128461010,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128500959 Gene ID= ENSG00000136811.16 TPM= 2.04 Transcript Type= NA chr9 128456126 128500959 128456126 128500959 + transcript2819.chr9.nic@ODF2 transcript2819.chr9.nic protein_coding 128456126,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128498413,128499001,128500067 128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128496141,128498575,128499126,128500959 Gene ID= ENSG00000136811.16 TPM= 5.43 Transcript Type= NA chr9 128456126 128500959 128456126 128500959 + transcript2820.chr9.nic@ODF2 transcript2820.chr9.nic protein_coding 128456126,128459567,128460513,128460942,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128485365,128487890,128492426,128492701,128494510,128496041,128498413,128499001,128500067 128456255,128459657,128460666,128461067,128471468,128473042,128473741,128481651,128482887,128484054,128484886,128485474,128488025,128492536,128492805,128494668,128496141,128498575,128499126,128500959 Gene ID= ENSG00000136811.16 TPM= 2.94 Transcript Type= NA chr9 128456126 128500959 128456126 128500959 + transcript2822.chr9.nic@ODF2 transcript2822.chr9.nic protein_coding 128456126,128459567,128460513,128460942,128469183,128471308,128472913,128473610,128481580,128482816,128483938,128484701,128487890,128492426,128492701,128494510,128498413,128499001,128500067 128456255,128459657,128460666,128461067,128469353,128471468,128473042,128473741,128481651,128482887,128484054,128485474,128488025,128492536,128492805,128496141,128498575,128499126,128500959 Gene ID= ENSG00000136811.16 TPM= 1.81 Transcript Type= NA chr9 128504691 128542526 128504691 128542526 + transcript2823.chr9.nnic@GLE1 transcript2823.chr9.nnic protein_coding 128504691,128507216,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128533513,128533761,128536355,128537986,128539616,128540275,128541102 128504904,128507340,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128533655,128533951,128536484,128538090,128539698,128540338,128542526 Gene ID= ENSG00000119392.14 TPM= 12.68 Transcript Type= NA chr9 128504700 128542288 128504700 128542288 + ENST00000309971.8@GLE1 ENST00000309971.8 protein_coding 128504700,128508876,128515529,128522668,128523280,128523592,128525192,128527179,128527456,128533513,128533761,128536355,128537986,128539616,128540275,128541102 128504904,128509097,128515639,128522816,128523340,128523846,128525423,128527291,128527525,128533655,128533951,128536484,128538090,128539698,128540338,128542288 Gene ID= ENSG00000119392.14 TPM= 56.14 Transcript Type= protein_coding chr9 128552558 128633662 128552558 128633662 + ENST00000372731.8@SPTAN1 ENST00000372731.8 protein_coding 128552558,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128592983,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209 128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128593042,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662 Gene ID= ENSG00000197694.15 TPM= 8.86 Transcript Type= protein_coding chr9 128625572 128633662 128625572 128633662 + transcript2834.chr9.nic@SPTAN1 transcript2834.chr9.nic protein_coding 128625572,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209 128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662 Gene ID= ENSG00000197694.15 TPM= 24.93 Transcript Type= NA chr9 128625595 128633662 128625595 128633662 + transcript2836.chr9.nic@SPTAN1 transcript2836.chr9.nic protein_coding 128625595,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209 128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662 Gene ID= ENSG00000197694.15 TPM= 17.69 Transcript Type= NA chr9 128552590 128633658 128552590 128633658 + ENST00000372739.5@SPTAN1 ENST00000372739.5 protein_coding 128552590,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128592983,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128609651,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209 128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128593042,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128609665,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633658 Gene ID= ENSG00000197694.15 TPM= 2.34 Transcript Type= protein_coding chr9 128552593 128633662 128552593 128633662 + ENST00000358161.9@SPTAN1 ENST00000358161.9 protein_coding 128552593,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209 128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633662 Gene ID= ENSG00000197694.15 TPM= 20.18 Transcript Type= protein_coding chr9 128552587 128633659 128552587 128633659 + ENST00000630804.2@SPTAN1 ENST00000630804.2 protein_coding 128552587,128566738,128568772,128574675,128575199,128576823,128577129,128577352,128578110,128579637,128580922,128581782,128582479,128582694,128583077,128583788,128584282,128584721,128585748,128587606,128588809,128591477,128594175,128598400,128598963,128600080,128603543,128604326,128605034,128605296,128607604,128607852,128608130,128608874,128609122,128609651,128611714,128612109,128613381,128615632,128617640,128617987,128618871,128621158,128624328,128625103,128625769,128626391,128627386,128627925,128630321,128632127,128632431,128632572,128632808,128633209 128552696,128566977,128568897,128574815,128575345,128576956,128577273,128577506,128578245,128579738,128581059,128581892,128582556,128582849,128583281,128583969,128584525,128584843,128585965,128587698,128588943,128591625,128594373,128598504,128598986,128600115,128603590,128604417,128605178,128605477,128607703,128608049,128608276,128608977,128609284,128609665,128611845,128612246,128613485,128615840,128617760,128618108,128619003,128621256,128624487,128625179,128625978,128626687,128627498,128627942,128630375,128632323,128632484,128632718,128632955,128633659 Gene ID= ENSG00000197694.15 TPM= 6.59 Transcript Type= protein_coding chr9 128633647 128656757 128633647 128656757 - transcript2839.chr9.nnic@WDR34 transcript2839.chr9.nnic protein_coding 128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633647 128656757,128640939,128637027,128636438,128635767,128635175,128634921,128634383,128633982 Gene ID= ENSG00000119333.11 TPM= 19.02 Transcript Type= NA chr9 128633647 128656757 128633647 128656757 - transcript2845.chr9.nic@WDR34 transcript2845.chr9.nic protein_coding 128656541,128640691,128636918,128635658,128635092,128634689,128634226,128633647 128656757,128640939,128637027,128636438,128635259,128634921,128634383,128633982 Gene ID= ENSG00000119333.11 TPM= 8.15 Transcript Type= NA chr9 128633647 128656757 128633647 128656757 - transcript2850.chr9.nic@WDR34 transcript2850.chr9.nic protein_coding 128656541,128640691,128636918,128635092,128634689,128634226,128633647 128656757,128640939,128637027,128636438,128634921,128634383,128633982 Gene ID= ENSG00000119333.11 TPM= 13.13 Transcript Type= NA chr9 128633661 128656787 128633661 128656787 - ENST00000372715.6@WDR34 ENST00000372715.6 protein_coding 128656541,128640691,128636918,128636281,128635658,128635092,128634689,128634226,128633661 128656787,128640939,128637027,128636438,128635767,128635259,128634921,128634383,128633982 Gene ID= ENSG00000119333.11 TPM= 216.43 Transcript Type= protein_coding chr9 128689226 128696388 128689226 128696388 + ENST00000322030.12@SET ENST00000322030.12 protein_coding 128689226,128691170,128691858,128692662,128692868,128693638,128693896,128694641 128689655,128691227,128692000,128692765,128692981,128693808,128694042,128696388 Gene ID= ENSG00000119335.16 TPM= 120.44 Transcript Type= protein_coding chr9 128702523 128720918 128702523 128720918 + ENST00000291906.4@PKN3 ENST00000291906.4 protein_coding 128702523,128705303,128705734,128706713,128706896,128707222,128713052,128713278,128713499,128714046,128714197,128714562,128714798,128715172,128715369,128716747,128718325,128718549,128719686,128719910,128720203,128720394 128702939,128705543,128705879,128706824,128707023,128707405,128713198,128713387,128713642,128714121,128714365,128714664,128714865,128715235,128715460,128716923,128718387,128718625,128719828,128720017,128720283,128720918 Gene ID= ENSG00000160447.6 TPM= 7.24 Transcript Type= protein_coding chr9 128720880 128724135 128720880 128724135 - transcript2890.chr9.nnic@ZDHHC12 transcript2890.chr9.nnic protein_coding 128723994,128722438,128722009,128721651,128720880 128724135,128722574,128722086,128721817,128721400 Gene ID= ENSG00000160446.18 TPM= 1.81 Transcript Type= NA chr9 128720869 128724106 128720869 128724106 - ENST00000372663.8@ZDHHC12 ENST00000372663.8 protein_coding 128723994,128722438,128722009,128721651,128720869 128724106,128722574,128722086,128721817,128721502 Gene ID= ENSG00000160446.18 TPM= 75.16 Transcript Type= protein_coding chr9 128724445 128733194 128724445 128733194 + ENST00000443631.1@AL441992.1 ENST00000443631.1 antisense_RNA 128724445,128732842 128724635,128733194 Gene ID= ENSG00000223478.1 TPM= 1.81 Transcript Type= antisense_RNA chr9 128729787 128771945 128729787 128771945 - transcript2873.chr9.nic@ZER1 transcript2873.chr9.nic protein_coding 128771815,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729787 128771945,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394 Gene ID= ENSG00000160445.10 TPM= 98.7 Transcript Type= NA chr9 128729787 128771936 128729787 128771936 - transcript2881.chr9.nnic@ZER1 transcript2881.chr9.nnic protein_coding 128771581,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128735334,128733426,128729787 128771936,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128735431,128733528,128731394 Gene ID= ENSG00000160445.10 TPM= 6.34 Transcript Type= NA chr9 128729786 128771893 128729786 128771893 - ENST00000291900.6@ZER1 ENST00000291900.6 protein_coding 128771581,128755408,128753809,128753164,128752673,128751413,128751122,128750616,128742530,128741800,128741535,128740772,128739931,128735334,128733426,128729786 128771893,128755659,128753959,128753600,128752849,128751527,128751268,128750789,128742745,128741841,128741654,128740887,128740119,128735431,128733528,128731394 Gene ID= ENSG00000160445.10 TPM= 163 Transcript Type= protein_coding chr9 128787186 128810431 128787186 128810431 + transcript2901.chr9.nnic@TBC1D13 transcript2901.chr9.nnic protein_coding 128787186,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805922,128806254,128807814 128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810431 Gene ID= ENSG00000107021.15 TPM= 11.17 Transcript Type= NA chr9 128787282 128810431 128787282 128810431 + transcript2903.chr9.nic@TBC1D13 transcript2903.chr9.nic protein_coding 128787282,128788334,128791380,128791594,128792492,128797055,128803250,128803956,128805859,128806254,128807814 128787376,128788407,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810431 Gene ID= ENSG00000107021.15 TPM= 9.35 Transcript Type= NA chr9 128787204 128810432 128787204 128810432 + ENST00000372648.9@TBC1D13 ENST00000372648.9 protein_coding 128787204,128788334,128790735,128791380,128791594,128792492,128797055,128803250,128803956,128805859,128806254,128807814 128787376,128788407,128790775,128791441,128791693,128792574,128797214,128803460,128804119,128806019,128806311,128810432 Gene ID= ENSG00000107021.15 TPM= 115.3 Transcript Type= protein_coding chr9 128818474 128822677 128818474 128822677 + ENST00000372642.4@ENDOG ENST00000372642.4 protein_coding 128818474,128820739,128822328 128819185,128820848,128822677 Gene ID= ENSG00000167136.6 TPM= 62.48 Transcript Type= protein_coding chr9 128819651 128829821 128819651 128829821 - ENST00000361256.9@SPOUT1 ENST00000361256.9 protein_coding 128829745,128829110,128828735,128827032,128826540,128826384,128826022,128824977,128824771,128824072,128823747,128819651 128829821,128829155,128828860,128827191,128826629,128826433,128826152,128825049,128824869,128824174,128823894,128822833 Gene ID= ENSG00000198917.12 TPM= 55.24 Transcript Type= protein_coding chr9 128832942 128882075 128832942 128882075 - ENST00000436267.6@KYAT1 ENST00000436267.6 protein_coding 128881897,128847433,128846680,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128832942 128882075,128847643,128846859,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643 Gene ID= ENSG00000171097.13 TPM= 2.11 Transcript Type= protein_coding chr9 128833114 128881932 128833114 128881932 - transcript2914.chr9.nnic@KYAT1 transcript2914.chr9.nnic protein_coding 128881897,128846680,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833114 128881932,128846856,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643 Gene ID= ENSG00000171097.13 TPM= 3.02 Transcript Type= NA chr9 128833113 128882053 128833113 128882053 - ENST00000302586.7@KYAT1 ENST00000302586.7 protein_coding 128881897,128845353,128842654,128838218,128838051,128837685,128836802,128835997,128835779,128835481,128835323,128833740,128833113 128882053,128845411,128842801,128838367,128838137,128837813,128836922,128836073,128835868,128835667,128835402,128833826,128833643 Gene ID= ENSG00000171097.13 TPM= 5.73 Transcript Type= protein_coding chr9 128882112 128918039 128882112 128918039 + ENST00000372600.8@LRRC8A ENST00000372600.8 protein_coding 128882112,128886015,128907157,128916096 128882250,128886121,128909321,128918039 Gene ID= ENSG00000136802.11 TPM= 75.16 Transcript Type= protein_coding chr9 128882196 128918036 128882196 128918036 + ENST00000372599.7@LRRC8A ENST00000372599.7 protein_coding 128882196,128907157,128916096 128882250,128909321,128918036 Gene ID= ENSG00000136802.11 TPM= 19.02 Transcript Type= protein_coding chr9 128922274 128942043 128922274 128942043 + transcript2933.chr9.nic@PHYHD1 transcript2933.chr9.nic protein_coding 128922274,128927038,128933782,128934011,128936448,128936583,128937757,128940369,128940599,128941445,128941668 128922356,128927196,128933857,128934058,128936503,128936645,128937778,128940497,128940715,128941571,128942043 Gene ID= ENSG00000175287.18 TPM= 37.13 Transcript Type= NA chr9 128947680 129007096 128947680 129007096 + transcript2937.chr9.nnic@NUP188 transcript2937.chr9.nnic protein_coding 128947680,128949189,128952773,128956350,128956952,128958010,128958802,128959015,128968506,128969400,128970758,128973160,128979262,128980606,128981264,128982549,128982902,128983293,128983474,128984900,128986558,128986809,128987589,128987916,128990120,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502 128947751,128949243,128952846,128956434,128957032,128958054,128958894,128959134,128968717,128969514,128970958,128973249,128979327,128980725,128981390,128982701,128983028,128983380,128983550,128985014,128986678,128986875,128987717,128988186,128990226,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096 Gene ID= ENSG00000095319.14 TPM= 1.81 Transcript Type= NA chr9 128947680 129007096 128947680 129007096 + transcript2939.chr9.nic@NUP188 transcript2939.chr9.nic protein_coding 128947680,128949189,128952773,128956350,128956952,128958010,128958802,128959015,128968506,128969400,128970758,128973160,128979262,128980606,128981264,128982549,128982902,128983293,128983474,128984900,128986558,128986809,128987589,128988047,128990153,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502 128947751,128949243,128952846,128956434,128957032,128958054,128958894,128959134,128968717,128969514,128970958,128973249,128979327,128980725,128981390,128982701,128983028,128983380,128983550,128985014,128986678,128986875,128987717,128988186,128990226,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096 Gene ID= ENSG00000095319.14 TPM= 2.72 Transcript Type= NA chr9 128947699 129007096 128947699 129007096 + ENST00000372577.2@NUP188 ENST00000372577.2 protein_coding 128947699,128949189,128952773,128956350,128956952,128958010,128958802,128959015,128968506,128969400,128970758,128973160,128979262,128980606,128981264,128982549,128982902,128983293,128983474,128984900,128986558,128986809,128987589,128988047,128990120,128993197,128993525,128994373,128994856,128995319,128998151,128998538,128999172,128999624,129001529,129001884,129002817,129003317,129005147,129005303,129005645,129006050,129006239,129006502 128947751,128949243,128952846,128956434,128957032,128958054,128958894,128959134,128968717,128969514,128970958,128973249,128979327,128980725,128981390,128982701,128983028,128983380,128983550,128985014,128986678,128986875,128987717,128988186,128990226,128993403,128993694,128994442,128994923,128995514,128998228,128998623,128999317,128999805,129001729,129001976,129002975,129003454,129005221,129005530,129005776,129006123,129006368,129007096 Gene ID= ENSG00000095319.14 TPM= 36.22 Transcript Type= protein_coding chr9 129007039 129028361 129007039 129028361 - transcript2959.chr9.nic@SH3GLB2 transcript2959.chr9.nic protein_coding 129028092,129022282,129021091,129015740,129014771,129014411,129010670,129010120,129009771,129009106,129007039 129028361,129022423,129021219,129015864,129014904,129014503,129012298,129010209,129009871,129009346,129008791 Gene ID= ENSG00000148341.17 TPM= 15.75 Transcript Type= NA chr9 129008028 129028361 129008028 129028361 - transcript2963.chr9.nic@SH3GLB2 transcript2963.chr9.nic protein_coding 129028092,129022282,129021091,129014771,129014411,129010670,129010120,129009771,129009106,129008684,129008028 129028361,129022423,129021219,129014904,129014503,129012298,129010209,129009871,129009346,129008791,129008150 Gene ID= ENSG00000148341.17 TPM= 16.75 Transcript Type= NA chr9 129007039 129028361 129007039 129028361 - transcript2969.chr9.nic@SH3GLB2 transcript2969.chr9.nic protein_coding 129028092,129022282,129021091,129014771,129014411,129010670,129010120,129009771,129009106,129007039 129028361,129022423,129021219,129014904,129014503,129012298,129010209,129009871,129009346,129008791 Gene ID= ENSG00000148341.17 TPM= 74.61 Transcript Type= NA chr9 129007771 129028361 129007771 129028361 - transcript2974.chr9.nic@SH3GLB2 transcript2974.chr9.nic protein_coding 129028092,129022282,129021091,129014771,129014411,129010120,129009771,129009106,129007771 129028361,129022423,129021219,129014904,129014503,129012298,129009871,129009346,129008791 Gene ID= ENSG00000148341.17 TPM= 33.41 Transcript Type= NA chr9 129007036 129028300 129007036 129028300 - ENST00000372564.7@SH3GLB2 ENST00000372564.7 protein_coding 129028092,129022282,129021091,129014771,129014411,129012236,129010670,129010120,129009771,129009106,129007036 129028300,129022423,129021219,129014904,129014503,129012298,129010693,129010209,129009871,129009346,129008791 Gene ID= ENSG00000148341.17 TPM= 219.5 Transcript Type= protein_coding chr9 129008039 129028279 129008039 129028279 - ENST00000372554.8@SH3GLB2 ENST00000372554.8 protein_coding 129028092,129022282,129021091,129014771,129014411,129013008,129012236,129010670,129010120,129009771,129009453,129009106,129008039 129028279,129022423,129021219,129014904,129014503,129013019,129012298,129010693,129010209,129009871,129009467,129009346,129008791 Gene ID= ENSG00000148341.17 TPM= 1.58 Transcript Type= protein_coding chr9 129036528 129072087 129036528 129072087 + transcript2996.chr9.nic@MIGA2 transcript2996.chr9.nic protein_coding 129036528,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247 129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072087 Gene ID= ENSG00000148343.18 TPM= 125.68 Transcript Type= NA chr9 129036623 129072087 129036623 129072087 + transcript2998.chr9.nic@MIGA2 transcript2998.chr9.nic protein_coding 129036623,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247 129036681,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068975,129069129,129069965,129072087 Gene ID= ENSG00000148343.18 TPM= 8.26 Transcript Type= NA chr9 129036934 129072082 129036934 129072082 + ENST00000358369.8@MIGA2 ENST00000358369.8 protein_coding 129036934,129040452,129042304,129048427,129049381,129049827,129059154,129060550,129061231,129063244,129063545,129067773,129068198,129069076,129069849,129070247 129037016,129040690,129042514,129048539,129049498,129049963,129059271,129060650,129061346,129063316,129063631,129067871,129068332,129069129,129069965,129072082 Gene ID= ENSG00000148343.18 TPM= 30.6 Transcript Type= protein_coding chr9 129081100 129090435 129081100 129090435 + ENST00000372546.8@DOLPP1 ENST00000372546.8 protein_coding 129081100,129084668,129085023,129085207,129085518,129086139,129086709,129088971 129081207,129084768,129085107,129085306,129085616,129086267,129086798,129090435 Gene ID= ENSG00000167130.17 TPM= 54.33 Transcript Type= protein_coding chr9 129081111 129090435 129081111 129090435 + ENST00000406974.7@DOLPP1 ENST00000406974.7 protein_coding 129081111,129084668,129085023,129085207,129085518,129086709,129088971 129081207,129084768,129085107,129085306,129085616,129086798,129090435 Gene ID= ENSG00000167130.17 TPM= 4.53 Transcript Type= protein_coding chr9 129094796 129110810 129094796 129110810 - transcript3020.chr9.nic@CRAT transcript3020.chr9.nic protein_coding 129110483,129109179,129108408,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129095998,129094796 129110810,129109277,129108478,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612 Gene ID= ENSG00000095321.16 TPM= 11.77 Transcript Type= NA chr9 129094810 129110804 129094810 129110804 - ENST00000318080.6@CRAT ENST00000318080.6 protein_coding 129110483,129107814,129104188,129103013,129102400,129101883,129100511,129099866,129098531,129098249,129098013,129097250,129095998,129094810 129110804,129108077,129104306,129103066,129102565,129102057,129100689,129099966,129098650,129098371,129098148,129097312,129096135,129095612 Gene ID= ENSG00000095321.16 TPM= 297.92 Transcript Type= protein_coding chr9 129111314 129148945 129111314 129148945 + ENST00000337738.5@PTPA ENST00000337738.5 protein_coding 129111314,129120513,129123052,129127964,129128985,129131522,129134795,129136471,129137592,129142445,129147387 129111631,129120610,129123138,129128068,129129110,129131639,129134894,129136595,129137692,129142552,129148945 Gene ID= ENSG00000119383.19 TPM= 23.91 Transcript Type= protein_coding chr9 129111318 129148946 129111318 129148946 + ENST00000393370.6@PTPA ENST00000393370.6 protein_coding 129111318,129120513,129123052,129128985,129131522,129134795,129136471,129137592,129142445,129147387 129111631,129120610,129123138,129129110,129131639,129134894,129136595,129137692,129142552,129148946 Gene ID= ENSG00000119383.19 TPM= 128.95 Transcript Type= protein_coding chr9 129111314 129148945 129111314 129148945 + ENST00000357197.8@PTPA ENST00000357197.8 protein_coding 129111314,129120513,129128985,129131522,129134795,129136471,129137592,129142445,129147387 129111631,129120610,129129110,129131639,129134894,129136595,129137692,129142552,129148945 Gene ID= ENSG00000119383.19 TPM= 12.13 Transcript Type= protein_coding chr9 129111414 129148946 129111414 129148946 + ENST00000355007.7@PTPA ENST00000355007.7 protein_coding 129111414,129120513,129123052,129131522,129134795,129136471,129137592,129142445,129147387 129111631,129120610,129123138,129131639,129134894,129136595,129137692,129142552,129148946 Gene ID= ENSG00000119383.19 TPM= 11.23 Transcript Type= protein_coding chr9 129336879 129347464 129336879 129347464 + ENST00000444125.1@LINC01503 ENST00000444125.1 lincRNA 129336879,129338792,129341736,129347226 129336988,129338917,129342043,129347464 Gene ID= ENSG00000233901.5 TPM= 1.81 Transcript Type= lincRNA chr9 129476948 129505054 129476948 129505054 + transcript3086.chr9.nnic@LINC00963 transcript3086.chr9.nnic processed_transcript 129476948,129489209,129493419,129503323 129477159,129489299,129493595,129505054 Gene ID= ENSG00000204054.13 TPM= 4.07 Transcript Type= NA chr9 129488655 129504258 129488655 129504258 + transcript3087.chr9.nic@LINC00963 transcript3087.chr9.nic processed_transcript 129488655,129493419,129502397,129503323 129489299,129493595,129503139,129504258 Gene ID= ENSG00000204054.13 TPM= 8.15 Transcript Type= NA chr9 129488728 129504432 129488728 129504432 + transcript3092.chr9.nic@LINC00963 transcript3092.chr9.nic processed_transcript 129488728,129493478,129502397,129503323 129489299,129493595,129503139,129504432 Gene ID= ENSG00000204054.13 TPM= 1.81 Transcript Type= NA chr9 129488676 129505124 129488676 129505124 + transcript3097.chr9.nic@LINC00963 transcript3097.chr9.nic processed_transcript 129488676,129493478,129503323 129489299,129493595,129505124 Gene ID= ENSG00000204054.13 TPM= 4.07 Transcript Type= NA chr9 129626134 129636743 129626134 129636743 + transcript3109.chr9.nic@NTMT1 transcript3109.chr9.nic protein_coding 129626134,129632650,129634054,129635208 129626295,129632801,129634221,129636743 Gene ID= ENSG00000148335.14 TPM= 9.96 Transcript Type= NA chr9 129626823 129636745 129626823 129636745 + transcript3118.chr9.nic@NTMT1 transcript3118.chr9.nic protein_coding 129626823,129632650,129634054,129635208 129628715,129632865,129634306,129636745 Gene ID= ENSG00000148335.14 TPM= 14.79 Transcript Type= NA chr9 129634602 129642155 129634602 129642155 - transcript3108.chr9.nic@ASB6 transcript3108.chr9.nic protein_coding 129641887,129640541,129639402,129638573,129634602 129642155,129640722,129639508,129639310,129638457 Gene ID= ENSG00000148331.11 TPM= 18.56 Transcript Type= NA chr9 129636892 129642165 129636892 129642165 - ENST00000277458.4@ASB6 ENST00000277458.4 protein_coding 129641887,129640541,129639402,129639202,129638573,129636892 129642165,129640722,129639508,129639310,129638659,129638457 Gene ID= ENSG00000148331.11 TPM= 60.22 Transcript Type= protein_coding chr9 129803129 129811280 129803129 129811280 + transcript3132.chr9.nic@TOR1B transcript3132.chr9.nic protein_coding 129803129,129804073,129807188,129808905,129810227 129803411,129804338,129807363,129809032,129811280 Gene ID= ENSG00000136816.15 TPM= 1.81 Transcript Type= NA chr9 129803153 129811281 129803153 129811281 + ENST00000259339.6@TOR1B ENST00000259339.6 protein_coding 129803153,129804073,129807188,129808905,129809342 129803411,129804338,129807363,129809032,129811281 Gene ID= ENSG00000136816.15 TPM= 9.96 Transcript Type= protein_coding chr9 129812944 129824134 129812944 129824134 - ENST00000351698.4@TOR1A ENST00000351698.4 protein_coding 129823908,129822581,129818745,129818520,129812944 129824134,129822846,129818920,129818647,129814222 Gene ID= ENSG00000136827.11 TPM= 67.01 Transcript Type= protein_coding chr9 129827290 129835275 129827290 129835275 - ENST00000372447.7@C9orf78 ENST00000372447.7 protein_coding 129835139,129834707,129833658,129833447,129831896,129830871,129829405,129829205,129827290 129835275,129834766,129833709,129833517,129831973,129831068,129829541,129829303,129828252 Gene ID= ENSG00000136819.15 TPM= 99.61 Transcript Type= protein_coding chr9 129835398 129881841 129835398 129881841 + transcript3142.chr9.nic@USP20 transcript3142.chr9.nic protein_coding 129835398,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880379 129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881841 Gene ID= ENSG00000136878.12 TPM= 10.52 Transcript Type= NA chr9 129835452 129881844 129835452 129881844 + transcript3149.chr9.nic@USP20 transcript3149.chr9.nic protein_coding 129835452,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880467 129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881844 Gene ID= ENSG00000136878.12 TPM= 4.64 Transcript Type= NA chr9 129835453 129881841 129835453 129881841 + transcript3152.chr9.nnic@USP20 transcript3152.chr9.nnic protein_coding 129835453,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880379 129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881841 Gene ID= ENSG00000136878.12 TPM= 3.28 Transcript Type= NA chr9 129835446 129881838 129835446 129881838 + ENST00000372429.7@USP20 ENST00000372429.7 protein_coding 129835446,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113,129880467 129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129880289,129881838 Gene ID= ENSG00000136878.12 TPM= 73.91 Transcript Type= protein_coding chr9 129835470 129881828 129835470 129881828 + ENST00000315480.8@USP20 ENST00000315480.8 protein_coding 129835470,129849813,129852540,129856307,129858050,129858467,129860937,129861543,129863186,129865303,129868005,129868862,129869310,129869672,129870453,129873482,129873699,129874576,129874829,129875310,129875560,129876130,129878338,129879573,129880113 129835499,129849924,129852636,129856360,129858112,129858598,129861033,129861612,129863299,129865381,129868449,129869002,129869425,129869844,129870547,129873515,129873744,129874756,129874955,129875479,129875641,129876238,129878440,129879644,129881828 Gene ID= ENSG00000136878.12 TPM= 5.54 Transcript Type= protein_coding chr9 129895264 130043162 129895264 130043162 - transcript3171.chr9.nnic@FNBP1 transcript3171.chr9.nnic protein_coding 130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129915966,129908890,129902869,129900426,129899965,129895264 130043162,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129915980,129908999,129903001,129900547,129900101,129895996 Gene ID= ENSG00000187239.16 TPM= 1.81 Transcript Type= NA chr9 129895264 130043231 129895264 130043231 - transcript3172.chr9.nic@FNBP1 transcript3172.chr9.nic protein_coding 130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129908890,129902869,129900426,129899965,129895264 130043231,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129923996,129908999,129903001,129900547,129900101,129895996 Gene ID= ENSG00000187239.16 TPM= 3.62 Transcript Type= NA chr9 129887187 130043194 129887187 130043194 - ENST00000420781.5@FNBP1 ENST00000420781.5 protein_coding 130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129923844,129908890,129902869,129900426,129899965,129895838,129887187 130043194,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129924026,129908999,129903001,129900547,129900101,129895996,129890546 Gene ID= ENSG00000187239.16 TPM= 4.53 Transcript Type= protein_coding chr9 129887187 130043194 129887187 130043194 - ENST00000443566.6@FNBP1 ENST00000443566.6 protein_coding 130042952,129994843,129979318,129978465,129958491,129957360,129929567,129927195,129924960,129908890,129902869,129900426,129899965,129895838,129887187 130043194,129994958,129979374,129978612,129958553,129957464,129929695,129927341,129925157,129908999,129903001,129900547,129900101,129895996,129890546 Gene ID= ENSG00000187239.16 TPM= 4.53 Transcript Type= protein_coding chr9 130053706 130140169 130053706 130140169 + ENST00000372410.7@GPR107 ENST00000372410.7 protein_coding 130053706,130075636,130076412,130077299,130079630,130083565,130086420,130090876,130092248,130099457,130100629,130101106,130104420,130107496,130110370,130124915,130127483,130128640,130135025 130054073,130075749,130076462,130077378,130079769,130083602,130086476,130090983,130092381,130099532,130100702,130101223,130104550,130107539,130110426,130124964,130127566,130128761,130140169 Gene ID= ENSG00000148358.19 TPM= 6.34 Transcript Type= protein_coding chr9 130053426 130140164 130053426 130140164 + ENST00000347136.10@GPR107 ENST00000347136.10 protein_coding 130053426,130075636,130076412,130077299,130079630,130083565,130086420,130090876,130092248,130099457,130100629,130101106,130104420,130107496,130124915,130127483,130128640,130135025 130054073,130075749,130076462,130077378,130079769,130083602,130086476,130090983,130092381,130099532,130100702,130101223,130104550,130107539,130124964,130127566,130128761,130140164 Gene ID= ENSG00000148358.19 TPM= 9.06 Transcript Type= protein_coding chr9 130053889 130108321 130053889 130108321 + transcript3181.chr9.nic@GPR107 transcript3181.chr9.nic protein_coding 130053889,130075636,130076412,130077299,130079630,130083565,130086420,130090876,130092248,130099457,130100629,130101106,130104420,130107496 130054073,130075749,130076462,130077378,130079769,130083602,130086476,130090983,130092381,130099532,130100702,130101223,130104550,130108321 Gene ID= ENSG00000148358.19 TPM= 3.62 Transcript Type= NA chr9 130172578 130237304 130172578 130237304 + ENST00000372398.5@NCS1 ENST00000372398.5 protein_coding 130172578,130200958,130217832,130219725,130222650,130223082,130226389,130232990 130172727,130200982,130217970,130219803,130222738,130223159,130226504,130237304 Gene ID= ENSG00000107130.9 TPM= 19.02 Transcript Type= protein_coding chr9 130444929 130501274 130444929 130501274 + ENST00000352480.9@ASS1 ENST00000352480.9 protein_coding 130444929,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976 130444995,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501274 Gene ID= ENSG00000130707.17 TPM= 186.39 Transcript Type= protein_coding chr9 130444988 130501255 130444988 130501255 + ENST00000372393.7@ASS1 ENST00000372393.7 protein_coding 130444988,130450272,130452224,130454305,130458401,130464111,130466725,130470834,130471485,130476871,130479716,130480385,130489333,130494867,130499505,130500976 130444995,130450333,130452333,130454373,130458589,130464167,130466799,130470904,130471515,130476961,130479800,130480449,130489464,130495023,130499570,130501255 Gene ID= ENSG00000130707.17 TPM= 16.15 Transcript Type= protein_coding chr9 130579534 130638354 130579534 130638354 + transcript3200.chr9.nnic@FUBP3 transcript3200.chr9.nnic protein_coding 130579534,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130635999,130637014 130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130636126,130638354 Gene ID= ENSG00000107164.15 TPM= 14.49 Transcript Type= NA chr9 130579582 130638354 130579582 130638354 + transcript3202.chr9.nnic@FUBP3 transcript3202.chr9.nnic protein_coding 130579582,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014 130579764,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638354 Gene ID= ENSG00000107164.15 TPM= 2.72 Transcript Type= NA chr9 130579606 130638352 130579606 130638352 + ENST00000319725.9@FUBP3 ENST00000319725.9 protein_coding 130579606,130595483,130609954,130612456,130612956,130614288,130616355,130617797,130620354,130622708,130623611,130626364,130630628,130631557,130631942,130632202,130634667,130635999,130637014 130579764,130595588,130609987,130612505,130613027,130614345,130616517,130617895,130620458,130622810,130623711,130626505,130630788,130631630,130632022,130632278,130634738,130636126,130638352 Gene ID= ENSG00000107164.15 TPM= 102.33 Transcript Type= protein_coding chr9 130693721 130704861 130693721 130704861 + ENST00000372358.9@EXOSC2 ENST00000372358.9 protein_coding 130693721,130695492,130697582,130698162,130699329,130700867,130702134,130703053,130703694 130693913,130695593,130697627,130698251,130699394,130700935,130702310,130703181,130704861 Gene ID= ENSG00000130713.15 TPM= 9.06 Transcript Type= protein_coding chr9 130693780 130704861 130693780 130704861 + ENST00000372352.7@EXOSC2 ENST00000372352.7 protein_coding 130693780,130695492,130697582,130698162,130699329,130700867,130702158,130703053,130703694 130693913,130695593,130697627,130698251,130699394,130700935,130702310,130703181,130704861 Gene ID= ENSG00000130713.15 TPM= 1.81 Transcript Type= protein_coding chr9 130902440 130936383 130902440 130936383 - transcript3211.chr9.nnic@FIBCD1 transcript3211.chr9.nnic protein_coding 130936211,130930626,130929567,130924237,130923744,130911792,130905234,130902440 130936383,130930796,130930046,130924396,130923880,130911888,130905413,130904323 Gene ID= ENSG00000130720.12 TPM= 8.33 Transcript Type= NA chr9 130902440 130939666 130902440 130939666 - transcript3215.chr9.nic@FIBCD1 transcript3215.chr9.nic protein_coding 130939214,130938536,130929567,130924237,130923744,130911792,130905234,130902440 130939666,130938648,130930046,130924396,130923880,130911888,130905413,130904323 Gene ID= ENSG00000130720.12 TPM= 2.9 Transcript Type= NA chr9 130902440 130936342 130902440 130936342 - transcript3216.chr9.nnic@FIBCD1 transcript3216.chr9.nnic protein_coding 130935222,130929567,130924237,130923744,130911792,130905234,130902440 130936342,130930046,130924396,130923880,130911888,130905413,130904323 Gene ID= ENSG00000130720.12 TPM= 2.9 Transcript Type= NA chr9 130902440 130936382 130902440 130936382 - transcript3218.chr9.nnic@FIBCD1 transcript3218.chr9.nnic protein_coding 130936247,130929567,130924237,130923744,130911792,130905234,130902440 130936382,130930046,130924396,130923880,130911888,130905413,130904323 Gene ID= ENSG00000130720.12 TPM= 2.9 Transcript Type= NA chr9 130902440 130938850 130902440 130938850 - ENST00000372338.8@FIBCD1 ENST00000372338.8 protein_coding 130938536,130929567,130924237,130923744,130911792,130905234,130902440 130938850,130930046,130924396,130923880,130911888,130905413,130904323 Gene ID= ENSG00000130720.12 TPM= 2.9 Transcript Type= protein_coding chr9 130902440 130932498 130902440 130932498 - transcript3221.chr9.nic@FIBCD1 transcript3221.chr9.nic protein_coding 130929567,130924237,130923744,130911792,130905234,130902440 130932498,130924396,130923880,130911888,130905413,130904323 Gene ID= ENSG00000130720.12 TPM= 2.72 Transcript Type= NA chr9 131009125 131093096 131009125 131093096 + transcript3224.chr9.nnic@LAMC3 transcript3224.chr9.nnic protein_coding 131009125,131026285,131032045,131036166,131038864,131039131,131041637,131045524,131049020,131052491,131052850,131056929,131061035,131066960,131068078,131068908,131069672,131071484,131072630,131073245,131075831,131077187,131079149,131082059,131085506,131087476,131087718,131091537 131009587,131026589,131032175,131036332,131039052,131039248,131041735,131045660,131049130,131052683,131052965,131057147,131061223,131067205,131068231,131069050,131069850,131071625,131072835,131073321,131075965,131077334,131079298,131082161,131085723,131087622,131087817,131093096 Gene ID= ENSG00000050555.17 TPM= 3.92 Transcript Type= NA chr9 131009082 131093059 131009082 131093059 + ENST00000361069.8@LAMC3 ENST00000361069.8 protein_coding 131009082,131026285,131032045,131036166,131038864,131039131,131041637,131045524,131049020,131052491,131052850,131056929,131061035,131066960,131068078,131068908,131069672,131071484,131072630,131073245,131075831,131077187,131079149,131082059,131085524,131087476,131087718,131091537 131009587,131026589,131032175,131036332,131039052,131039248,131041735,131045660,131049130,131052683,131052965,131057147,131061223,131067205,131068231,131069050,131069850,131071625,131072835,131073321,131075965,131077334,131079298,131082161,131085723,131087622,131087817,131093059 Gene ID= ENSG00000050555.17 TPM= 137.04 Transcript Type= protein_coding chr9 131174137 131234665 131174137 131234665 + transcript3235.chr9.nic@NUP214 transcript3235.chr9.nic protein_coding 131174137,131175460,131178311,131187289,131189053,131192208,131195233,131197216,131201647,131215212,131222778,131228160,131230630,131232284,131233454 131174318,131175621,131178410,131187364,131189131,131192292,131195294,131199015,131201717,131215368,131222930,131228331,131230769,131232308,131234665 Gene ID= ENSG00000126883.16 TPM= 13.58 Transcript Type= NA chr9 131228085 131234665 131228085 131234665 + transcript3236.chr9.nic@NUP214 transcript3236.chr9.nic protein_coding 131228085,131230630,131232284,131233454 131228331,131230769,131232308,131234665 Gene ID= ENSG00000126883.16 TPM= 5.43 Transcript Type= NA chr9 131289699 131293029 131289699 131293029 + transcript3239.chr9.nnic@PLPP7 transcript3239.chr9.nnic protein_coding 131289699,131291111,131292788 131290448,131291179,131293029 Gene ID= ENSG00000160539.4 TPM= 1.81 Transcript Type= NA chr9 131289694 131309262 131289694 131309262 + ENST00000372264.3@PLPP7 ENST00000372264.3 protein_coding 131289694,131307923 131290448,131309262 Gene ID= ENSG00000160539.4 TPM= 36.22 Transcript Type= protein_coding chr9 131394093 131500197 131394093 131500197 + ENST00000405995.5@PRRC2B ENST00000405995.5 protein_coding 131394093,131430090,131432617,131436620,131438989,131444185,131446401,131447085,131447662,131455076,131459164,131464763,131467563,131470788,131473508,131477744,131478474,131479252,131481726,131482371,131482710,131483359,131484686,131484948,131486085,131487167,131487856,131491425,131492169,131494405,131495740 131394263,131430259,131432794,131436722,131439061,131444328,131446642,131447206,131447804,131455166,131459356,131465078,131467753,131470983,131473724,131477949,131478619,131479393,131481808,131482562,131482907,131483445,131484790,131485140,131486182,131487294,131488096,131491580,131492260,131494486,131500197 Gene ID= ENSG00000130723.18 TPM= 57.95 Transcript Type= protein_coding chr9 131502902 131523806 131502902 131523806 + ENST00000423007.5@POMT1 ENST00000423007.5 protein_coding 131502902,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932 131503313,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806 Gene ID= ENSG00000130714.15 TPM= 3.02 Transcript Type= protein_coding chr9 131502925 131523806 131502925 131523806 + ENST00000372228.7@POMT1 ENST00000372228.7 protein_coding 131502925,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932 131503073,131504340,131506220,131506453,131507514,131509022,131509808,131510062,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806 Gene ID= ENSG00000130714.15 TPM= 3.62 Transcript Type= protein_coding chr9 131502918 131523806 131502918 131523806 + ENST00000341012.11@POMT1 ENST00000341012.11 protein_coding 131502918,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932 131503073,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806 Gene ID= ENSG00000130714.15 TPM= 3.92 Transcript Type= protein_coding chr9 131502984 131523800 131502984 131523800 + transcript3257.chr9.nic@POMT1 transcript3257.chr9.nic protein_coding 131502984,131504189,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932 131503073,131504340,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523800 Gene ID= ENSG00000130714.15 TPM= 2.72 Transcript Type= NA chr9 131502902 131523806 131502902 131523806 + ENST00000404875.6@POMT1 ENST00000404875.6 protein_coding 131502902,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932 131503073,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806 Gene ID= ENSG00000130714.15 TPM= 4.53 Transcript Type= protein_coding chr9 131502944 131523806 131502944 131523806 + ENST00000402686.7@POMT1 ENST00000402686.7 protein_coding 131502944,131504189,131506114,131506403,131507368,131508911,131509743,131509903,131510260,131511337,131512041,131513239,131515426,131518445,131518837,131519389,131520080,131521346,131522047,131522932 131503073,131504340,131506220,131506453,131507514,131509022,131509808,131509996,131510415,131511467,131512136,131513331,131515522,131518537,131518957,131519486,131520193,131521472,131522224,131523806 Gene ID= ENSG00000130714.15 TPM= 50.1 Transcript Type= protein_coding chr9 131523797 131531309 131523797 131531309 - transcript3263.chr9.nnic@UCK1 transcript3263.chr9.nnic protein_coding 131531067,131530486,131529488,131529128,131528944,131525929,131523797 131531309,131530645,131529584,131529201,131529038,131525977,131525221 Gene ID= ENSG00000130717.12 TPM= 3.17 Transcript Type= NA chr9 131523797 131531259 131523797 131531259 - transcript3268.chr9.nic@UCK1 transcript3268.chr9.nic protein_coding 131531067,131530486,131529488,131529128,131528944,131525929,131523797 131531259,131530687,131529584,131529270,131529038,131525977,131525221 Gene ID= ENSG00000130717.12 TPM= 3.47 Transcript Type= NA chr9 131523801 131531268 131523801 131531268 - ENST00000372215.4@UCK1 ENST00000372215.4 protein_coding 131531067,131530486,131529488,131529128,131528944,131525929,131523801 131531268,131530645,131529584,131529270,131529038,131525977,131525221 Gene ID= ENSG00000130717.12 TPM= 100.36 Transcript Type= protein_coding chr9 131523801 131531200 131523801 131531200 - ENST00000372211.7@UCK1 ENST00000372211.7 protein_coding 131531094,131530486,131529488,131529128,131528944,131525929,131523801 131531200,131530687,131529584,131529270,131529038,131525977,131525221 Gene ID= ENSG00000130717.12 TPM= 2.56 Transcript Type= protein_coding chr9 131576771 131740111 131576771 131740111 - transcript3277.chr9.nic@RAPGEF1 transcript3277.chr9.nic protein_coding 131739770,131650810,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576771 131740111,131650949,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647 Gene ID= ENSG00000107263.18 TPM= 19.47 Transcript Type= NA chr9 131576770 131740074 131576770 131740074 - ENST00000372195.5@RAPGEF1 ENST00000372195.5 protein_coding 131739770,131650810,131650129,131643239,131638635,131630236,131629102,131628549,131627913,131625922,131621796,131602061,131598199,131596298,131592099,131589886,131588801,131587942,131587736,131584518,131584311,131582605,131580263,131576770 131740074,131650949,131650242,131643417,131638791,131630324,131629254,131628672,131628096,131626422,131621998,131602149,131598310,131596373,131592183,131589978,131588986,131588026,131587830,131584596,131584412,131582702,131580391,131579647 Gene ID= ENSG00000107263.18 TPM= 16.75 Transcript Type= protein_coding chr9 131860107 132079908 131860107 132079908 - ENST00000292035.9@MED27 ENST00000292035.9 protein_coding 132079642,132077442,132014337,131939381,131893885,131884058,131863063,131860107 132079908,132077586,132014467,131939474,131893992,131884099,131863140,131860672 Gene ID= ENSG00000160563.13 TPM= 21.28 Transcript Type= protein_coding chr9 131860107 132079866 131860107 132079866 - ENST00000357028.6@MED27 ENST00000357028.6 protein_coding 132079642,132077442,132014337,131939381,131884058,131863063,131860107 132079866,132077586,132014467,131939474,131884099,131863140,131860672 Gene ID= ENSG00000160563.13 TPM= 1.36 Transcript Type= protein_coding chr9 132161664 132242835 132161664 132242835 + transcript3281.chr9.nnic@NTNG2 transcript3281.chr9.nnic protein_coding 132161664,132166349,132197966,132226849,132230572,132231643,132235651,132237421,132239104,132240910,132241876 132162239,132167044,132198609,132227021,132230595,132231789,132235719,132237522,132239271,132241044,132242835 Gene ID= ENSG00000196358.10 TPM= 4.53 Transcript Type= NA chr9 132238376 132242835 132238376 132242835 + transcript3284.chr9.nic@NTNG2 transcript3284.chr9.nic protein_coding 132238376,132240910,132241876 132239271,132241044,132242835 Gene ID= ENSG00000196358.10 TPM= 3.62 Transcript Type= NA chr9 132375621 132406822 132375621 132406822 - ENST00000334270.2@TTF1 ENST00000334270.2 protein_coding 132406790,132401455,132400035,132398141,132396433,132392076,132390597,132388139,132386556,132379059,132375621 132406822,132402828,132400258,132398326,132396511,132392206,132390831,132388228,132386621,132379144,132376168 Gene ID= ENSG00000125482.12 TPM= 7.24 Transcript Type= protein_coding chr9 132670475 132690817 132670475 132690817 + transcript3294.chr9.nnic@GTF3C4 transcript3294.chr9.nnic protein_coding 132670475,132677977,132683563,132687239,132688881 132670955,132678039,132683693,132687327,132690817 Gene ID= ENSG00000125484.11 TPM= 2.72 Transcript Type= NA chr9 132878324 132890034 132878324 132890034 + transcript3302.chr9.nic@SPACA9 transcript3302.chr9.nic protein_coding 132878324,132883911,132887369,132888290,132889957 132878436,132884091,132887571,132888437,132890034 Gene ID= ENSG00000165698.15 TPM= 5.43 Transcript Type= NA chr9 132878027 132890031 132878027 132890031 + ENST00000372136.7@SPACA9 ENST00000372136.7 protein_coding 132878027,132883911,132887369,132888290 132878436,132884091,132887571,132890031 Gene ID= ENSG00000165698.15 TPM= 10.41 Transcript Type= protein_coding chr9 132878898 132890031 132878898 132890031 + ENST00000356311.9@SPACA9 ENST00000356311.9 protein_coding 132878898,132883911,132887369,132888290 132879014,132884091,132887571,132890031 Gene ID= ENSG00000165698.15 TPM= 4.07 Transcript Type= protein_coding chr9 132909837 132944628 132909837 132944628 - transcript3309.chr9.nnic@TSC1 transcript3309.chr9.nnic protein_coding 132944572,132935033,132928767,132927201,132925587,132923348,132921819,132921363,132912282,132911453,132911002,132909837 132944628,132935095,132928952,132927304,132925739,132923492,132921973,132921436,132912457,132911568,132911113,132910692 Gene ID= ENSG00000165699.13 TPM= 2.72 Transcript Type= NA chr9 132895521 132906548 132895521 132906548 - transcript3311.chr9.nnic@TSC1 transcript3311.chr9.nnic protein_coding 132905581,132904411,132903651,132902605,132901589,132900715,132897423,132897184,132895521 132906548,132904454,132903817,132902787,132901701,132900837,132897610,132897345,132896756 Gene ID= ENSG00000165699.13 TPM= 1.81 Transcript Type= NA chr9 132895947 132906548 132895947 132906548 - transcript3312.chr9.nnic@TSC1 transcript3312.chr9.nnic protein_coding 132903651,132902605,132900715,132897184,132895947 132906548,132902787,132901701,132897610,132896756 Gene ID= ENSG00000165699.13 TPM= 1.81 Transcript Type= NA chr9 132909811 132944595 132909811 132944595 - ENST00000493467.5@TSC1 ENST00000493467.5 protein_coding 132944543,132935033,132928767,132927201,132925587,132923348,132921819,132921363,132912282,132911453,132911002,132909811 132944595,132935095,132928952,132927304,132925739,132923492,132921973,132921436,132912457,132911568,132911113,132910692 Gene ID= ENSG00000165699.13 TPM= 5.43 Transcript Type= retained_intron chr9 133030708 133058501 133030708 133058501 + transcript3314.chr9.nnic@GTF3C5 transcript3314.chr9.nnic protein_coding 133030708,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133054944,133056012,133056766,133057814 133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133055039,133056094,133056908,133058501 Gene ID= ENSG00000148308.17 TPM= 3.85 Transcript Type= NA chr9 133030676 133058501 133030676 133058501 + transcript3315.chr9.nic@GTF3C5 transcript3315.chr9.nic protein_coding 133030676,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133054944,133056766,133057814 133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058501 Gene ID= ENSG00000148308.17 TPM= 9.28 Transcript Type= NA chr9 133030689 133058503 133030689 133058503 + ENST00000372097.9@GTF3C5 ENST00000372097.9 protein_coding 133030689,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133056012,133056766,133057814 133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133056094,133056908,133058503 Gene ID= ENSG00000148308.17 TPM= 51.39 Transcript Type= protein_coding chr9 133031004 133058501 133031004 133058501 + ENST00000372108.9@GTF3C5 ENST00000372108.9 protein_coding 133031004,133042087,133043728,133050783,133052060,133053828,133054408,133054712,133054944,133056012,133056766,133057814 133031164,133042306,133043926,133050978,133052164,133053942,133054488,133054809,133054964,133056094,133056908,133058501 Gene ID= ENSG00000148308.17 TPM= 2.49 Transcript Type= protein_coding chr9 133097721 133149231 133097721 133149231 - transcript3333.chr9.nic@RALGDS transcript3333.chr9.nic protein_coding 133148963,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133100496,133100268,133097721 133149231,133112152,133110489,133109721,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762 Gene ID= ENSG00000160271.14 TPM= 6.7 Transcript Type= NA chr9 133097721 133149433 133097721 133149433 - transcript3337.chr9.nic@RALGDS transcript3337.chr9.nic protein_coding 133148963,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097721 133149433,133112152,133110489,133109685,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762 Gene ID= ENSG00000160271.14 TPM= 40.51 Transcript Type= NA chr9 133097720 133121176 133097720 133121176 - ENST00000372047.7@RALGDS ENST00000372047.7 protein_coding 133120972,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097720 133121176,133112152,133110489,133109685,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762 Gene ID= ENSG00000160271.14 TPM= 15.15 Transcript Type= protein_coding chr9 133097720 133121176 133097720 133121176 - ENST00000372050.7@RALGDS ENST00000372050.7 protein_coding 133120972,133112042,133110296,133109626,133108673,133107988,133107085,133106645,133105932,133104263,133103747,133103230,133102779,133102476,133101938,133101520,133100268,133097720 133121176,133112152,133110489,133109721,133108866,133108406,133107300,133106748,133106016,133104331,133103833,133103262,133102900,133102571,133102139,133101762,133100382,133098762 Gene ID= ENSG00000160271.14 TPM= 13.34 Transcript Type= protein_coding chr9 133152953 133163945 133152953 133163945 - ENST00000372040.7@GBGT1 ENST00000372040.7 protein_coding 133163754,133162342,133161467,133156015,133155901,133155178,133152953 133163945,133162532,133161532,133156065,133155936,133155312,133154261 Gene ID= ENSG00000148288.11 TPM= 7.7 Transcript Type= protein_coding chr9 133152953 133163919 133152953 133163919 - ENST00000372043.7@GBGT1 ENST00000372043.7 protein_coding 133163754,133162342,133161467,133156015,133155901,133155178,133152953 133163919,133162532,133161532,133156065,133155936,133155312,133154242 Gene ID= ENSG00000148288.11 TPM= 4.07 Transcript Type= protein_coding chr9 133250401 133275205 133250401 133275205 - transcript3356.chr9.nnic@ABO transcript3356.chr9.nnic protein_coding 133275162,133262099,133261318,133259819,133258097,133257409,133255594,133250401 133275205,133262168,133261374,133259866,133258132,133257542,133256356,133251152 Gene ID= ENSG00000175164.13 TPM= 1.81 Transcript Type= NA chr9 133253516 133275228 133253516 133275228 - transcript3358.chr9.nnic@ABO transcript3358.chr9.nnic protein_coding 133275162,133262099,133261318,133259819,133258097,133257409,133254827,133253516 133275228,133262168,133261374,133259866,133258132,133257542,133256356,133254755 Gene ID= ENSG00000175164.13 TPM= 5.43 Transcript Type= NA chr9 133253520 133275199 133253520 133275199 - transcript3359.chr9.nnic@ABO transcript3359.chr9.nnic protein_coding 133275162,133262099,133261318,133259819,133258097,133257409,133254827,133253520 133275199,133262168,133261374,133259866,133258132,133257542,133256356,133254776 Gene ID= ENSG00000175164.13 TPM= 2.72 Transcript Type= NA chr9 133253863 133275232 133253863 133275232 - transcript3360.chr9.nnic@ABO transcript3360.chr9.nnic protein_coding 133275162,133262099,133261318,133259819,133258097,133257409,133254827,133253863 133275232,133262168,133261374,133259866,133258132,133257542,133256356,133254702 Gene ID= ENSG00000175164.13 TPM= 1.81 Transcript Type= NA chr9 133254311 133275804 133254311 133275804 - transcript3366.chr9.nnic@ABO transcript3366.chr9.nnic protein_coding 133275162,133262099,133261318,133259819,133258097,133257409,133254827,133254311 133275804,133262168,133261374,133259866,133258132,133257542,133256356,133254734 Gene ID= ENSG00000175164.13 TPM= 2.72 Transcript Type= NA chr9 133250401 133275201 133250401 133275201 - ENST00000453660.3@ABO ENST00000453660.3 protein_coding 133275162,133262099,133261318,133259819,133258097,133257409,133250401 133275201,133262168,133261374,133259866,133258132,133257542,133256356 Gene ID= ENSG00000175164.13 TPM= 3.62 Transcript Type= processed_transcript chr9 133328774 133336398 133328774 133336398 - ENST00000372022.5@SURF6 ENST00000372022.5 protein_coding 133336039,133334392,133333718,133332548,133328774 133336398,133334601,133333806,133332760,133332348 Gene ID= ENSG00000148296.6 TPM= 85.8 Transcript Type= protein_coding chr9 133340905 133348117 133340905 133348117 - ENST00000610888.4@MED22 ENST00000610888.4 protein_coding 133347922,133346540,133345172,133340905 133348117,133346700,133345252,133344333 Gene ID= ENSG00000148297.15 TPM= 42.56 Transcript Type= protein_coding chr9 133340905 133348117 133340905 133348117 - ENST00000343730.9@MED22 ENST00000343730.9 protein_coding 133347922,133346540,133345172,133344125,133340905 133348117,133346700,133345252,133344333,133341694 Gene ID= ENSG00000148297.15 TPM= 5.43 Transcript Type= protein_coding chr9 133348214 133351426 133348214 133351426 + ENST00000323345.10@RPL7A ENST00000323345.10 protein_coding 133348214,133348922,133349551,133349912,133350240,133350597,133351002,133351262 133348246,133349042,133349700,133350052,133350319,133350727,133351071,133351426 Gene ID= ENSG00000148303.16 TPM= 517.37 Transcript Type= protein_coding chr9 133348252 133351372 133348252 133351372 + ENST00000468019.5@RPL7A ENST00000468019.5 protein_coding 133348252,133348922,133349551,133349912,133350240,133350597,133351002,133351262 133348388,133349042,133349700,133350052,133350319,133350727,133351071,133351372 Gene ID= ENSG00000148303.16 TPM= 2.11 Transcript Type= processed_transcript chr9 133356105 133356676 133356105 133356676 - ENST00000463965.1@SURF1 ENST00000463965.1 protein_coding 133356400,133356105 133356676,133356320 Gene ID= ENSG00000148290.9 TPM= 4.53 Transcript Type= processed_transcript chr9 133351755 133356485 133351755 133356485 - ENST00000371974.7@SURF1 ENST00000371974.7 protein_coding 133356400,133356269,133354824,133354659,133353749,133352694,133352446,133352061,133351755 133356485,133356320,133354957,133354741,133353940,133352766,133352608,133352142,133351982 Gene ID= ENSG00000148290.9 TPM= 81.5 Transcript Type= protein_coding chr9 133351805 133356485 133351805 133356485 - ENST00000615505.4@SURF1 ENST00000615505.4 protein_coding 133356400,133354824,133354659,133353749,133352694,133352446,133352061,133351805 133356485,133354957,133354741,133353940,133352766,133352608,133352142,133351982 Gene ID= ENSG00000148290.9 TPM= 6.34 Transcript Type= protein_coding chr9 133356526 133361156 133356526 133361156 + transcript3405.chr9.nic@SURF2 transcript3405.chr9.nic protein_coding 133356526,133356914,133357711,133359950,133360265,133361056 133356670,133357182,133357814,133360129,133360434,133361156 Gene ID= ENSG00000148291.9 TPM= 4.53 Transcript Type= NA chr9 133356526 133361156 133356526 133361156 + transcript3406.chr9.nic@SURF2 transcript3406.chr9.nic protein_coding 133356526,133356914,133357711,133359950,133360265,133361056 133356670,133357234,133357814,133360129,133360434,133361156 Gene ID= ENSG00000148291.9 TPM= 1.81 Transcript Type= NA chr9 133356552 133361169 133356552 133361169 + ENST00000371964.4@SURF2 ENST00000371964.4 protein_coding 133356552,133356914,133357711,133359950,133360265,133361056 133356670,133357068,133357814,133360129,133360434,133361169 Gene ID= ENSG00000148291.9 TPM= 15.39 Transcript Type= protein_coding chr9 133361450 133376166 133361450 133376166 - ENST00000613129.4@SURF4 ENST00000613129.4 protein_coding 133375922,133367259,133366599,133365985,133364840,133361450 133376166,133367543,133366675,133366028,133365026,133363759 Gene ID= ENSG00000148248.13 TPM= 31.54 Transcript Type= protein_coding chr9 133361450 133376166 133361450 133376166 - ENST00000545297.5@SURF4 ENST00000545297.5 protein_coding 133375922,133367259,133366599,133365985,133361450 133376166,133367445,133366675,133366028,133363759 Gene ID= ENSG00000148248.13 TPM= 21.13 Transcript Type= protein_coding chr9 133361449 133376099 133361449 133376099 - ENST00000371989.7@SURF4 ENST00000371989.7 protein_coding 133375922,133367259,133366599,133365985,133364840,133361449 133376099,133367445,133366675,133366028,133365026,133363759 Gene ID= ENSG00000148248.13 TPM= 247.97 Transcript Type= protein_coding chr9 133406062 133418044 133406062 133418044 - ENST00000371942.7@REXO4 ENST00000371942.7 protein_coding 133417620,133414665,133412778,133412299,133410985,133408768,133407807,133406062 133418044,133415011,133412921,133412492,133411073,133408842,133407881,133407072 Gene ID= ENSG00000148300.11 TPM= 68.82 Transcript Type= protein_coding chr9 133459965 133470787 133459965 133470787 + ENST00000540581.5@CACFD1 ENST00000540581.5 protein_coding 133459965,133463483,133465322,133467921,133468340,133468563 133460187,133463555,133465447,133468028,133468464,133470787 Gene ID= ENSG00000160325.14 TPM= 1.36 Transcript Type= protein_coding chr9 133459967 133470848 133459967 133470848 + ENST00000291722.11@CACFD1 ENST00000291722.11 protein_coding 133459967,133463483,133467921,133468563 133460187,133463555,133468028,133470848 Gene ID= ENSG00000160325.14 TPM= 4.07 Transcript Type= protein_coding chr9 133471095 133479137 133471095 133479137 - ENST00000371899.8@SLC2A6 ENST00000371899.8 protein_coding 133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473415,133473105,133471095 133479137,133478416,133477241,133476336,133475611,133475113,133474088,133473600,133473250,133472176 Gene ID= ENSG00000160326.13 TPM= 17.21 Transcript Type= protein_coding chr9 133471095 133479096 133471095 133479096 - ENST00000371897.8@SLC2A6 ENST00000371897.8 protein_coding 133478968,133478254,133477035,133476237,133475400,133474961,133473980,133473105,133471095 133479096,133478416,133477241,133476336,133475611,133475113,133474088,133473250,133472176 Gene ID= ENSG00000160326.13 TPM= 6.34 Transcript Type= protein_coding chr9 133534309 133575519 133534309 133575519 + ENST00000393061.7@ADAMTSL2 ENST00000393061.7 protein_coding 133534309,133536563,133537405,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746 133534917,133536802,133537547,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575519 Gene ID= ENSG00000197859.9 TPM= 40.14 Transcript Type= protein_coding chr9 133534641 133575520 133534641 133575520 + transcript3447.chr9.nnic@ADAMTSL2 transcript3447.chr9.nnic protein_coding 133534641,133536712,133537405,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746 133534917,133536802,133537547,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575520 Gene ID= ENSG00000197859.9 TPM= 43.77 Transcript Type= NA chr9 133534701 133575520 133534701 133575520 + transcript3450.chr9.nnic@ADAMTSL2 transcript3450.chr9.nnic protein_coding 133534701,133536712,133538349,133539771,133540598,133540878,133544470,133547038,133554357,133555558,133561198,133566936,133568273,133568603,133569408,133570331,133573843,133574746 133534917,133536802,133538424,133539873,133540743,133541001,133544550,133547213,133554693,133555930,133561295,133567062,133568486,133568758,133569578,133570507,133573987,133575520 Gene ID= ENSG00000197859.9 TPM= 14.79 Transcript Type= NA chr9 133577078 133609370 133577078 133609370 - transcript3454.chr9.nnic@FAM163B transcript3454.chr9.nnic protein_coding 133609077,133580131,133577078 133609370,133580246,133579429 Gene ID= ENSG00000196990.8 TPM= 2.72 Transcript Type= NA chr9 133636360 133659344 133636360 133659344 + ENST00000393056.6@DBH ENST00000393056.6 protein_coding 133636360,133639846,133642207,133643413,133644218,133647846,133651634,133652246,133652940,133656523,133657070,133658316 133636710,133639992,133642464,133643589,133644320,133648012,133651777,133652284,133652999,133656650,133657229,133659344 Gene ID= ENSG00000123454.10 TPM= 8.15 Transcript Type= protein_coding chr9 133663564 133738357 133663564 133738357 - ENST00000439388.5@SARDH ENST00000439388.5 protein_coding 133738254,133733843,133732423,133731305,133730064,133729765,133718938,133717326,133713038,133712619,133708287,133704948,133702916,133696223,133694258,133690380,133685193,133671535,133670584,133666735,133663564 133738357,133734203,133732601,133731484,133730187,133729865,133719042,133717455,133713124,133712709,133708428,133705031,133703029,133696361,133694371,133690527,133685286,133671697,133670752,133666870,133664014 Gene ID= ENSG00000123453.17 TPM= 7.24 Transcript Type= protein_coding chr9 133761894 133992281 133761894 133992281 - ENST00000406606.7@VAV2 ENST00000406606.7 protein_coding 133992075,133939103,133861374,133834272,133812114,133809040,133807258,133806081,133797710,133796429,133795668,133791783,133789258,133788354,133785776,133784317,133783503,133780694,133779918,133778762,133777389,133776028,133774935,133771959,133770378,133768442,133761894 133992281,133939219,133861432,133834340,133812216,133809138,133807326,133806181,133797809,133796524,133795736,133791869,133789343,133788486,133785885,133784418,133783591,133780710,133779939,133778889,133777463,133776080,133775051,133772046,133770501,133768596,133764109 Gene ID= ENSG00000160293.16 TPM= 32.6 Transcript Type= protein_coding chr9 134025472 134031587 134025472 134031587 + transcript3477.chr9.nic@LINC00094 transcript3477.chr9.nic protein_coding 134025472,134025845,134026208,134028826 134025536,134026090,134027262,134031587 Gene ID= ENSG00000235106.9 TPM= 7.54 Transcript Type= NA chr9 134025439 134031585 134025439 134031585 + ENST00000603928.2@LINC00094 ENST00000603928.2 protein_coding 134025439,134025845,134026208 134025536,134026090,134031585 Gene ID= ENSG00000235106.9 TPM= 51.01 Transcript Type= protein_coding chr9 134025495 134028102 134025495 134028102 + ENST00000432807.1@LINC00094 ENST00000432807.1 protein_coding 134025495,134025845 134025536,134028102 Gene ID= ENSG00000235106.9 TPM= 7.24 Transcript Type= protein_coding chr9 134030305 134068017 134030305 134068017 - ENST00000303407.11@BRD3 ENST00000303407.11 protein_coding 134067945,134053265,134052306,134051562,134050374,134048083,134045293,134041760,134040034,134036032,134034701,134030305 134068017,134053590,134052443,134051709,134050588,134048454,134045421,134041951,134040269,134036324,134034829,134033705 Gene ID= ENSG00000169925.16 TPM= 24.75 Transcript Type= protein_coding chr9 134135378 134159971 134135378 134159971 + transcript3482.chr9.nic@WDR5 transcript3482.chr9.nic protein_coding 134135378,134139820,134140703,134141510,134141949,134142333,134142636,134148288,134151983,134154466,134155340,134155693,134156506,134157893 134135842,134139958,134140811,134141583,134142038,134142422,134142719,134148343,134152029,134154541,134155373,134155767,134156593,134159971 Gene ID= ENSG00000196363.9 TPM= 2.72 Transcript Type= NA chr9 134148212 134158424 134148212 134158424 + transcript3484.chr9.nic@WDR5 transcript3484.chr9.nic protein_coding 134148212,134151983,134154466,134156506 134148343,134152029,134155767,134158424 Gene ID= ENSG00000196363.9 TPM= 2.72 Transcript Type= NA chr9 134136088 134159968 134136088 134159968 + ENST00000358625.3@WDR5 ENST00000358625.3 protein_coding 134136088,134139820,134140703,134141510,134141949,134142333,134142636,134148288,134151983,134154466,134155340,134155693,134156506,134157893 134136200,134139958,134140811,134141583,134142038,134142422,134142719,134148343,134152029,134154541,134155373,134155767,134156593,134159968 Gene ID= ENSG00000196363.9 TPM= 17.21 Transcript Type= protein_coding chr9 134406552 134440586 134406552 134440586 + transcript3492.chr9.nnic@RXRA transcript3492.chr9.nnic protein_coding 134406552,134408149,134408940,134417158,134421676,134429108,134431905,134434102,134436467 134407492,134408299,134409119,134417327,134421805,134429240,134431996,134434207,134440586 Gene ID= ENSG00000186350.9 TPM= 32.6 Transcript Type= NA chr9 134641774 134844843 134641774 134844843 + ENST00000371817.7@COL5A1 ENST00000371817.7 protein_coding 134641774,134690912,134699909,134701171,134727266,134728670,134730236,134731496,134732071,134738474,134738746,134750542,134750790,134752589,134753850,134754273,134756765,134758243,134761925,134763693,134765681,134766454,134767000,134767310,134768410,134772790,134774859,134780102,134782667,134784989,134785995,134789155,134795082,134795262,134796374,134796848,134798408,134801954,134802888,134804975,134805161,134806189,134809183,134810255,134811339,134811492,134812449,134812605,134813983,134814797,134815576,134815935,134817026,134817778,134818656,134818848,134819000,134820116,134822097,134822998,134823416,134824600,134825792,134829976,134834971,134842157 134642296,134691079,134700122,134701333,134727397,134728807,134730475,134731663,134732127,134738515,134738808,134750616,134750882,134752645,134753903,134754326,134756818,134758296,134761978,134763737,134765734,134766498,134767053,134767354,134768463,134772834,134774912,134780146,134782720,134785096,134786048,134789208,134795126,134795315,134796418,134796901,134798461,134802007,134802995,134805064,134805214,134806296,134809290,134810308,134811392,134811599,134812502,134812712,134814036,134814904,134815629,134815988,134817079,134817831,134818763,134818901,134819053,134820223,134822150,134823033,134823469,134824855,134825904,134830044,134835204,134844843 Gene ID= ENSG00000130635.15 TPM= 26.26 Transcript Type= protein_coding chr9 134880812 134890508 134880812 134890508 + transcript3507.chr9.nic@FCN2 transcript3507.chr9.nic protein_coding 134880812,134882526,134883302,134884740,134885239,134886430,134887168 134880921,134882639,134883355,134884772,134885897,134886564,134890508 Gene ID= ENSG00000160339.15 TPM= 8.51 Transcript Type= NA chr9 134880809 134890508 134880809 134890508 + transcript3510.chr9.nic@FCN2 transcript3510.chr9.nic protein_coding 134880809,134883302,134884740,134885239,134886430,134887168 134880921,134883355,134884772,134885897,134886564,134890508 Gene ID= ENSG00000160339.15 TPM= 13.04 Transcript Type= NA chr9 134880810 134890508 134880810 134890508 + transcript3513.chr9.nic@FCN2 transcript3513.chr9.nic protein_coding 134880810,134882526,134883302,134884740,134886430,134887168 134880921,134882639,134883355,134885897,134886564,134890508 Gene ID= ENSG00000160339.15 TPM= 8.51 Transcript Type= NA chr9 134880810 134890508 134880810 134890508 + transcript3518.chr9.nic@FCN2 transcript3518.chr9.nic protein_coding 134880810,134883302,134884740,134886430,134887168 134880921,134883355,134885897,134886564,134890508 Gene ID= ENSG00000160339.15 TPM= 10.32 Transcript Type= NA chr9 134880812 134887520 134880812 134887520 + ENST00000350339.3@FCN2 ENST00000350339.3 protein_coding 134880812,134883302,134884740,134885239,134885768,134886430,134887168 134880921,134883355,134884772,134885366,134885897,134886564,134887520 Gene ID= ENSG00000160339.15 TPM= 20.37 Transcript Type= protein_coding chr9 134880812 134887520 134880812 134887520 + ENST00000291744.10@FCN2 ENST00000291744.10 protein_coding 134880812,134882526,134883302,134884740,134885239,134885768,134886430,134887168 134880921,134882639,134883355,134884772,134885366,134885897,134886564,134887520 Gene ID= ENSG00000160339.15 TPM= 24.9 Transcript Type= protein_coding chr9 134909585 134917963 134909585 134917963 - ENST00000371806.3@FCN1 ENST00000371806.3 protein_coding 134917769,134916348,134914756,134914385,134913581,134913016,134912486,134911133,134909585 134917963,134916461,134914809,134914420,134913613,134913143,134912615,134911267,134910045 Gene ID= ENSG00000085265.10 TPM= 1.81 Transcript Type= protein_coding chr9 135075422 135098107 135075422 135098107 + ENST00000277415.15@OLFM1 ENST00000277415.15 protein_coding 135075422,135090195,135095864,135097781 135075802,135090344,135096019,135098107 Gene ID= ENSG00000130558.19 TPM= 9.96 Transcript Type= protein_coding chr9 135075520 135121178 135075520 135121178 + ENST00000252854.8@OLFM1 ENST00000252854.8 protein_coding 135075520,135090195,135095864,135098286,135106749,135119504 135075802,135090344,135096019,135098505,135106855,135121178 Gene ID= ENSG00000130558.19 TPM= 27.17 Transcript Type= protein_coding chr9 135087674 135098065 135087674 135098065 + ENST00000392991.8@OLFM1 ENST00000392991.8 protein_coding 135087674,135090195,135095864,135097781 135088139,135090344,135096019,135098065 Gene ID= ENSG00000130558.19 TPM= 3.62 Transcript Type= protein_coding chr9 135462728 135480751 135462728 135480751 - transcript3537.chr9.nic@PPP1R26-AS1 transcript3537.chr9.nic antisense_RNA 135480673,135468088,135462728 135480751,135468709,135464850 Gene ID= ENSG00000225361.3 TPM= 2.72 Transcript Type= NA chr9 135479776 135488898 135479776 135488898 + transcript3530.chr9.nnic@PPP1R26 transcript3530.chr9.nnic protein_coding 135479776,135482683,135483352,135483950,135484449 135480022,135482815,135483553,135484082,135488898 Gene ID= ENSG00000196422.10 TPM= 8.6 Transcript Type= NA chr9 135479463 135488898 135479463 135488898 + transcript3533.chr9.nnic@PPP1R26 transcript3533.chr9.nnic protein_coding 135479463,135482683,135483950,135484449 135479724,135482815,135484082,135488898 Gene ID= ENSG00000196422.10 TPM= 6.34 Transcript Type= NA chr9 135482681 135488898 135482681 135488898 + transcript3541.chr9.nnic@PPP1R26 transcript3541.chr9.nnic protein_coding 135482681,135483950,135484449 135482825,135484082,135488898 Gene ID= ENSG00000196422.10 TPM= 4.98 Transcript Type= NA chr9 135479802 135488893 135479802 135488893 + ENST00000356818.6@PPP1R26 ENST00000356818.6 protein_coding 135479802,135482683,135483950,135484449 135480022,135482815,135484082,135488893 Gene ID= ENSG00000196422.10 TPM= 24.45 Transcript Type= protein_coding chr9 135495181 135499872 135495181 135499872 - ENST00000429260.6@C9orf116 ENST00000429260.6 protein_coding 135499709,135498585,135495181 135499872,135498663,135495615 Gene ID= ENSG00000160345.12 TPM= 9.96 Transcript Type= protein_coding chr9 135499984 135504673 135499984 135504673 + ENST00000371785.5@MRPS2 ENST00000371785.5 protein_coding 135499984,135500570,135500998,135501844,135503542 135500051,135500753,135501123,135501973,135504673 Gene ID= ENSG00000122140.10 TPM= 120.44 Transcript Type= protein_coding chr9 135932970 135961410 135932970 135961410 - transcript3566.chr9.nnic@UBAC1 transcript3566.chr9.nnic protein_coding 135961025,135955295,135953680,135947798,135946944,135946269,135945889,135945028,135939673,135938222,135932970 135961410,135955415,135953753,135947905,135947055,135946371,135945997,135945250,135939759,135938360,135933515 Gene ID= ENSG00000130560.8 TPM= 3.62 Transcript Type= NA chr9 135932970 135961410 135932970 135961410 - transcript3574.chr9.nic@UBAC1 transcript3574.chr9.nic protein_coding 135961025,135955295,135953680,135946269,135945889,135945028,135939673,135938222,135932970 135961410,135955415,135953753,135947905,135945997,135945250,135939759,135938360,135933515 Gene ID= ENSG00000130560.8 TPM= 3.62 Transcript Type= NA chr9 135932966 135961321 135932966 135961321 - transcript3576.chr9.nic@UBAC1 transcript3576.chr9.nic protein_coding 135961025,135955295,135953680,135947798,135946269,135945028,135939673,135938222,135932966 135961321,135955415,135953753,135947905,135946371,135945997,135939759,135938360,135933515 Gene ID= ENSG00000130560.8 TPM= 2.72 Transcript Type= NA chr9 135932969 135961380 135932969 135961380 - ENST00000371756.3@UBAC1 ENST00000371756.3 protein_coding 135961025,135955295,135953680,135947798,135946269,135945889,135945028,135939673,135938222,135932969 135961380,135955415,135953753,135947905,135946371,135945997,135945250,135939759,135938360,135933515 Gene ID= ENSG00000130560.8 TPM= 72.44 Transcript Type= protein_coding chr9 136006537 136095285 136006537 136095285 - ENST00000277554.3@NACC2 ENST00000277554.3 protein_coding 136095189,136049636,136016265,136013864,136013199,136006537 136095285,136050580,136016429,136013969,136013296,136012024 Gene ID= ENSG00000148411.7 TPM= 21.73 Transcript Type= protein_coding chr9 136114586 136118410 136114586 136118410 - transcript3581.chr9.nic@TMEM250 transcript3581.chr9.nic protein_coding 136117866,136115456,136114586 136118410,136117024,136114950 Gene ID= ENSG00000238227.7 TPM= 4.53 Transcript Type= NA chr9 136114581 136118863 136114581 136118863 - ENST00000418388.5@TMEM250 ENST00000418388.5 protein_coding 136118485,136114581 136118863,136117024 Gene ID= ENSG00000238227.7 TPM= 110.48 Transcript Type= protein_coding chr9 136327476 136359605 136327476 136359605 + ENST00000440944.5@GPSM1 ENST00000440944.5 protein_coding 136327476,136334447,136335966,136336921,136337441,136337846,136338555,136339707,136340870,136348697,136349587,136355690,136356342,136358014 136327763,136334668,136336101,136337072,136337564,136337961,136338710,136339815,136340993,136348767,136349763,136355846,136356550,136359605 Gene ID= ENSG00000160360.12 TPM= 39.84 Transcript Type= protein_coding chr9 136361900 136363789 136361900 136363789 - ENST00000371738.3@DNLZ ENST00000371738.3 protein_coding 136363487,136362989,136361900 136363789,136363128,136362180 Gene ID= ENSG00000213221.4 TPM= 23.54 Transcript Type= protein_coding chr9 136363956 136373681 136363956 136373681 - ENST00000371732.9@CARD9 ENST00000371732.9 protein_coding 136373532,136371895,136371324,136370841,136370522,136370294,136369750,136367637,136367216,136366800,136365141,136364483,136363956 136373681,136372094,136371461,136371145,136370701,136370437,136369875,136367828,136367257,136366845,136365217,136364559,136364401 Gene ID= ENSG00000187796.14 TPM= 5.43 Transcript Type= protein_coding chr9 136375573 136400212 136375573 136400212 - transcript3596.chr9.nic@SNAPC4 transcript3596.chr9.nic protein_coding 136400134,136398299,136396977,136395603,136395298,136394800,136394249,136392673,136392522,136391942,136388444,136387742,136387485,136384720,136383953,136383186,136382253,136381824,136381322,136380740,136379837,136377543,136376349,136375573 136400212,136398437,136397023,136395770,136395423,136394878,136394330,136392777,136392594,136392106,136388591,136387848,136387579,136384814,136384032,136383668,136382336,136382073,136381392,136380850,136379864,136379299,136376481,136375800 Gene ID= ENSG00000165684.4 TPM= 9.06 Transcript Type= NA chr9 136401923 136410588 136401923 136410588 - transcript3598.chr9.nic@SDCCAG3 transcript3598.chr9.nic protein_coding 136410328,136408999,136407826,136407145,136405905,136405091,136404631,136404055,136401923 136410588,136409067,136407938,136407561,136405978,136405202,136404693,136404194,136402887 Gene ID= ENSG00000165689.16 TPM= 5.89 Transcript Type= NA chr9 136401951 136410600 136401951 136410600 - ENST00000371725.7@SDCCAG3 ENST00000371725.7 protein_coding 136410328,136407826,136407145,136405905,136405091,136404631,136404055,136401951 136410600,136407938,136407561,136405978,136405202,136404693,136404194,136402887 Gene ID= ENSG00000165689.16 TPM= 16.75 Transcript Type= protein_coding chr9 136410635 136423760 136410635 136423760 + transcript3617.chr9.nic@PMPCA transcript3617.chr9.nic protein_coding 136410635,136411997,136412490,136412810,136414553,136416291,136418017,136418555,136418828,136419044,136421832,136423095 136410739,136412199,136412569,136412892,136414647,136417214,136418109,136418673,136418918,136419106,136421976,136423760 Gene ID= ENSG00000165688.11 TPM= 14.94 Transcript Type= NA chr9 136410658 136412504 136410658 136412504 + ENST00000620412.4@PMPCA ENST00000620412.4 protein_coding 136410658,136411997 136410739,136412504 Gene ID= ENSG00000165688.11 TPM= 1.81 Transcript Type= retained_intron chr9 136428615 136439881 136428615 136439881 - transcript3622.chr9.nnic@INPP5E transcript3622.chr9.nnic protein_coding 136438608,136434740,136434037,136433155,136432956,136432316,136431824,136431002,136430277,136428615 136439881,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429807 Gene ID= ENSG00000148384.12 TPM= 2.72 Transcript Type= NA chr9 136428615 136439881 136428615 136439881 - transcript3629.chr9.nic@INPP5E transcript3629.chr9.nic protein_coding 136438608,136434740,136434037,136433155,136432956,136431824,136431002,136430277,136428615 136439881,136434863,136434134,136433279,136433075,136432586,136431117,136430413,136429807 Gene ID= ENSG00000148384.12 TPM= 4.53 Transcript Type= NA chr9 136428615 136439813 136428615 136439813 - transcript3634.chr9.nic@INPP5E transcript3634.chr9.nic protein_coding 136438608,136434740,136433155,136432956,136431824,136431002,136430277,136428615 136439813,136434863,136434134,136433075,136432586,136431117,136430413,136429807 Gene ID= ENSG00000148384.12 TPM= 4.53 Transcript Type= NA chr9 136428619 136439822 136428619 136439822 - ENST00000371712.3@INPP5E ENST00000371712.3 protein_coding 136438608,136434740,136434037,136433155,136432956,136432479,136431824,136431002,136430277,136428619 136439822,136434863,136434134,136433279,136433075,136432586,136431985,136431117,136430413,136429807 Gene ID= ENSG00000148384.12 TPM= 38.03 Transcript Type= protein_coding chr9 136440097 136483058 136440097 136483058 - transcript3639.chr9.nnic@SEC16A transcript3639.chr9.nnic protein_coding 136482938,136474049,136471975,136468415,136466957,136466264,136465962,136464420,136463679,136463463,136462887,136461177,136460042,136459757,136459444,136459134,136457444,136456053,136455601,136454109,136453428,136451256,136448084,136447853,136447569,136447227,136446855,136445645,136443823,136440097 136483058,136477684,136472111,136468512,136467083,136466462,136466136,136464562,136463740,136463601,136463132,136461274,136460123,136459874,136459555,136459239,136457584,136456166,136455793,136454327,136453510,136451408,136448161,136447909,136447680,136447364,136446949,136445719,136443900,136441823 Gene ID= ENSG00000148396.18 TPM= 19.92 Transcript Type= NA chr9 136494444 136545862 136494444 136545862 - ENST00000277541.6@NOTCH1 ENST00000277541.6 protein_coding 136545726,136544024,136523717,136522850,136519443,136518591,136518137,136517752,136517272,136515981,136515483,136515290,136514510,136513392,136513021,136511152,136510653,136509733,136508870,136508232,136507955,136507305,136506716,136506527,136505310,136504673,136503182,136502272,136502001,136501748,136500552,136499112,136498899,136494444 136545862,136544102,136523979,136523188,136519565,136518824,136518292,136517937,136517385,136516094,136515716,136515400,136514702,136513537,136513134,136511271,136510805,136509961,136509071,136508385,136508139,136507437,136506973,136506639,136505881,136505104,136503330,136502488,136502088,136501913,136500847,136499259,136498996,136497558 Gene ID= ENSG00000148400.9 TPM= 6.34 Transcript Type= protein_coding chr9 136662901 136672678 136662901 136672678 + transcript3656.chr9.nic@EGFL7 transcript3656.chr9.nic protein_coding 136662901,136664692,136668241,136668557,136669606,136670169,136670950,136671926,136672264 136663108,136664785,136668362,136668673,136670009,136670330,136671014,136672088,136672678 Gene ID= ENSG00000172889.15 TPM= 7.76 Transcript Type= NA chr9 136662901 136672678 136662901 136672678 + transcript3660.chr9.nic@EGFL7 transcript3660.chr9.nic protein_coding 136662901,136664692,136668557,136669606,136669914,136670169,136670950,136671926,136672264 136663108,136664785,136668673,136669721,136670009,136670330,136671014,136672088,136672678 Gene ID= ENSG00000172889.15 TPM= 11.61 Transcript Type= NA chr9 136662901 136672678 136662901 136672678 + transcript3665.chr9.nnic@EGFL7 transcript3665.chr9.nnic protein_coding 136662901,136664692,136668557,136669914,136670169,136670950,136671926,136672264 136663108,136664785,136668673,136670009,136670330,136671014,136672088,136672678 Gene ID= ENSG00000172889.15 TPM= 5.95 Transcript Type= NA chr9 136662930 136672678 136662930 136672678 + ENST00000406555.7@EGFL7 ENST00000406555.7 protein_coding 136662930,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264 136663108,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678 Gene ID= ENSG00000172889.15 TPM= 53.26 Transcript Type= protein_coding chr9 136662927 136672677 136662927 136672677 + ENST00000308874.11@EGFL7 ENST00000308874.11 protein_coding 136662927,136663408,136664692,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264 136663108,136663623,136664785,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672677 Gene ID= ENSG00000172889.15 TPM= 3.46 Transcript Type= protein_coding chr9 136665792 136672678 136665792 136672678 + ENST00000371698.3@EGFL7 ENST00000371698.3 protein_coding 136665792,136668241,136668557,136669606,136669914,136670169,136670950,136671926,136672264 136665817,136668362,136668673,136669721,136670009,136670330,136671014,136672088,136672678 Gene ID= ENSG00000172889.15 TPM= 10.7 Transcript Type= protein_coding chr9 136673143 136687423 136673143 136687423 - ENST00000371696.6@AGPAT2 ENST00000371696.6 protein_coding 136687176,136677423,136676961,136676585,136674735,136673143 136687423,136677556,136677136,136676680,136674807,136673927 Gene ID= ENSG00000169692.12 TPM= 133.57 Transcript Type= protein_coding chr9 136673143 136687398 136673143 136687398 - ENST00000371694.7@AGPAT2 ENST00000371694.7 protein_coding 136687176,136677423,136676961,136674735,136673143 136687398,136677556,136677136,136674807,136673927 Gene ID= ENSG00000169692.12 TPM= 4.98 Transcript Type= protein_coding chr9 136712570 136724050 136712570 136724050 + ENST00000371692.8@FAM69B ENST00000371692.8 protein_coding 136712570,136717577,136721921,136722125,136722962 136712728,136717711,136722028,136722301,136724050 Gene ID= ENSG00000165716.10 TPM= 8.15 Transcript Type= protein_coding chr9 136724366 136728775 136724366 136728775 - transcript3680.chr9.nic@SNHG7 transcript3680.chr9.nic antisense_RNA 136727881,136727046,136726311,136724366 136728775,136727086,136726416,136725110 Gene ID= ENSG00000233016.6 TPM= 50.71 Transcript Type= NA chr9 136724658 136728184 136724658 136728184 - ENST00000416970.5@SNHG7 ENST00000416970.5 antisense_RNA 136727881,136727046,136726311,136725055,136724658 136728184,136727086,136726416,136725110,136724939 Gene ID= ENSG00000233016.6 TPM= 12.68 Transcript Type= antisense_RNA chr9 136791355 136793257 136791355 136793257 + ENST00000290079.8@TMEM141 ENST00000290079.8 protein_coding 136791355,136791711,136791947,136792251,136792819 136791424,136791777,136792030,136792358,136793257 Gene ID= ENSG00000244187.7 TPM= 41.36 Transcript Type= protein_coding chr9 136791372 136793256 136791372 136793256 + ENST00000483187.5@TMEM141 ENST00000483187.5 protein_coding 136791372,136791947,136792251,136792819 136791424,136792030,136792358,136793256 Gene ID= ENSG00000244187.7 TPM= 2.42 Transcript Type= processed_transcript chr9 136791368 136793256 136791368 136793256 + ENST00000465017.5@TMEM141 ENST00000465017.5 protein_coding 136791368,136791626,136791947,136792251,136792819 136791424,136791777,136792030,136792358,136793256 Gene ID= ENSG00000244187.7 TPM= 3.32 Transcript Type= processed_transcript chr9 136807872 136841188 136807872 136841188 + transcript3689.chr9.nic@RABL6 transcript3689.chr9.nic protein_coding 136807872,136823525,136825779,136828494,136829393,136832265,136835742,136837346,136837862,136838909,136839222,136839694,136840154,136840322 136808326,136823659,136825826,136828546,136831861,136832370,136835845,136837662,136838015,136839121,136839486,136839865,136840212,136841188 Gene ID= ENSG00000196642.18 TPM= 22.64 Transcript Type= NA chr9 136849779 136851022 136849779 136851022 + ENST00000463215.1@PHPT1 ENST00000463215.1 protein_coding 136849779,136850755 136850137,136851022 Gene ID= ENSG00000054148.17 TPM= 5.43 Transcript Type= processed_transcript chr9 136862119 136866286 136862119 136866286 - ENST00000224073.5@EDF1 ENST00000224073.5 protein_coding 136866181,136863820,136863288,136862906,136862119 136866286,136863871,136863448,136862999,136862345 Gene ID= ENSG00000107223.12 TPM= 283.44 Transcript Type= protein_coding chr9 136862119 136866285 136862119 136866285 - ENST00000371649.5@EDF1 ENST00000371649.5 protein_coding 136866181,136863820,136863288,136862906,136862119 136866285,136863871,136863448,136862999,136862496 Gene ID= ENSG00000107223.12 TPM= 19.02 Transcript Type= protein_coding chr9 136886518 136926607 136886518 136926607 + ENST00000247668.6@TRAF2 ENST00000247668.6 protein_coding 136886518,136898713,136899594,136900422,136908070,136909920,136916541,136920234,136921038,136923852,136925683 136886541,136898928,136899672,136900520,136908231,136909994,136916615,136920515,136921215,136924000,136926607 Gene ID= ENSG00000127191.17 TPM= 25.36 Transcript Type= protein_coding chr9 136940436 136944705 136940436 136944705 - transcript3708.chr9.nnic@FBXW5 transcript3708.chr9.nnic protein_coding 136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940601,136940436 136944705,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171,136940462 Gene ID= ENSG00000159069.13 TPM= 11.82 Transcript Type= NA chr9 136940434 136944789 136940434 136944789 - transcript3722.chr9.nic@FBXW5 transcript3722.chr9.nic protein_coding 136944594,136943891,136943349,136942769,136942547,136942100,136941537,136941251,136940434 136944789,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171 Gene ID= ENSG00000159069.13 TPM= 46.53 Transcript Type= NA chr9 136940434 136944674 136940434 136944674 - transcript3729.chr9.nic@FBXW5 transcript3729.chr9.nic protein_coding 136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940434 136944674,136943506,136942943,136942695,136942466,136941684,136941463,136941171 Gene ID= ENSG00000159069.13 TPM= 21.24 Transcript Type= NA chr9 136940435 136944650 136940435 136944650 - ENST00000325285.7@FBXW5 ENST00000325285.7 protein_coding 136944594,136943891,136943349,136942769,136942547,136942046,136941537,136941251,136940435 136944650,136944106,136943506,136942943,136942695,136942466,136941684,136941463,136941171 Gene ID= ENSG00000159069.13 TPM= 388.89 Transcript Type= protein_coding chr9 136940435 136944696 136940435 136944696 - ENST00000459905.5@FBXW5 ENST00000459905.5 protein_coding 136944594,136943891,136943349,136942547,136942100,136941537,136941251,136940435 136944696,136944106,136943506,136942943,136942466,136941684,136941463,136941171 Gene ID= ENSG00000159069.13 TPM= 3.51 Transcript Type= retained_intron chr9 136940435 136944688 136940435 136944688 - ENST00000483559.5@FBXW5 ENST00000483559.5 protein_coding 136944594,136943891,136943349,136942769,136942046,136941537,136941251,136940435 136944688,136944106,136943506,136942943,136942695,136941684,136941463,136941171 Gene ID= ENSG00000159069.13 TPM= 6.75 Transcript Type= retained_intron chr9 136977505 136981738 136977505 136981738 + ENST00000371625.7@PTGDS ENST00000371625.7 protein_coding 136977505,136978993,136979223,136979946,136980183,136980833,136981579 136977692,136979132,136979299,136980062,136980284,136980855,136981738 Gene ID= ENSG00000107317.12 TPM= 131.3 Transcript Type= protein_coding chr9 136992422 136993988 136992422 136993988 + transcript3773.chr9.nnic@PAXX transcript3773.chr9.nnic protein_coding 136992422,136992640,136992925,136993093,136993343,136993580,136993766 136992562,136992700,136992974,136993243,136993411,136993664,136993988 Gene ID= ENSG00000148362.10 TPM= 3.62 Transcript Type= NA chr9 136992421 136993988 136992421 136993988 + transcript3774.chr9.nic@PAXX transcript3774.chr9.nic protein_coding 136992421,136992640,136992925,136993343,136993580,136993766 136992562,136992700,136993243,136993411,136993664,136993988 Gene ID= ENSG00000148362.10 TPM= 3.62 Transcript Type= NA chr9 136992415 136993988 136992415 136993988 + transcript3775.chr9.nnic@PAXX transcript3775.chr9.nnic protein_coding 136992415,136992640,136993053,136993343,136993580,136993766 136992562,136992704,136993243,136993411,136993664,136993988 Gene ID= ENSG00000148362.10 TPM= 2.72 Transcript Type= NA chr9 136992418 136993976 136992418 136993976 + ENST00000371620.3@PAXX ENST00000371620.3 protein_coding 136992418,136992640,136992925,136993053,136993343,136993580,136993766 136992562,136992700,136992974,136993243,136993411,136993664,136993976 Gene ID= ENSG00000148362.10 TPM= 21.73 Transcript Type= protein_coding chr9 136992463 136993984 136992463 136993984 + ENST00000498095.4@PAXX ENST00000498095.4 protein_coding 136992463,136992640,136993343,136993580,136993766 136992562,136993243,136993411,136993664,136993984 Gene ID= ENSG00000148362.10 TPM= 11.77 Transcript Type= retained_intron chr9 136992491 136993971 136992491 136993971 + ENST00000493968.5@PAXX ENST00000493968.5 protein_coding 136992491,136992640,136993053,136993343,136993580,136993766 136992562,136992974,136993243,136993411,136993664,136993971 Gene ID= ENSG00000148362.10 TPM= 2.72 Transcript Type= retained_intron chr9 136994635 136996803 136994635 136996803 - ENST00000494426.1@CLIC3 ENST00000494426.1 protein_coding 136996511,136995648,136995442,136995186,136994930,136994635 136996803,136995757,136995567,136995292,136995105,136994839 Gene ID= ENSG00000169583.12 TPM= 1.81 Transcript Type= protein_coding chr9 137007234 137028288 137007234 137028288 - ENST00000371605.7@ABCA2 ENST00000371605.7 protein_coding 137028075,137024143,137022941,137022702,137022351,137021891,137021392,137020694,137020336,137019178,137018903,137018719,137018178,137017973,137017787,137017502,137017196,137016920,137016574,137016291,137015962,137015675,137015414,137014913,137014690,137014168,137013832,137013461,137013002,137012712,137012485,137012265,137012102,137011844,137011634,137011407,137011186,137010973,137010620,137010193,137009983,137009769,137009541,137009370,137008951,137008731,137008416,137007234 137028288,137024236,137023052,137022865,137022478,137022001,137021610,137021061,137020495,137019306,137019070,137018815,137018351,137018075,137017901,137017692,137017346,137017124,137016738,137016471,137016174,137015871,137015596,137015097,137014810,137014404,137014038,137013563,137013318,137012925,137012590,137012376,137012162,137012018,137011749,137011554,137011309,137011105,137010737,137010371,137010124,137009903,137009644,137009462,137009053,137008868,137008622,137007964 Gene ID= ENSG00000107331.16 TPM= 19.02 Transcript Type= protein_coding chr9 137039456 137046077 137039456 137046077 - transcript3788.chr9.nnic@NPDC1 transcript3788.chr9.nnic protein_coding 137045878,137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039456 137046077,137043073,137041187,137040984,137040737,137040598,137040436,137040155,137039864 Gene ID= ENSG00000107281.9 TPM= 4.07 Transcript Type= NA chr9 137039456 137046187 137039456 137046187 - transcript3792.chr9.nnic@NPDC1 transcript3792.chr9.nnic protein_coding 137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039456 137046187,137041187,137040984,137040737,137040598,137040436,137040155,137039864 Gene ID= ENSG00000107281.9 TPM= 5.43 Transcript Type= NA chr9 137039470 137046203 137039470 137046203 - ENST00000371601.4@NPDC1 ENST00000371601.4 protein_coding 137045878,137042927,137041062,137040814,137040671,137040514,137040357,137039971,137039470 137046203,137043073,137041187,137040984,137040737,137040598,137040436,137040067,137039864 Gene ID= ENSG00000107281.9 TPM= 64.75 Transcript Type= protein_coding chr9 137062129 137070557 137062129 137070557 - transcript3796.chr9.nnic@SAPCD2 transcript3796.chr9.nnic protein_coding 137069890,137066262,137065522,137065078,137064863,137063538,137062129 137070557,137066374,137065668,137065185,137064979,137064787,137063494 Gene ID= ENSG00000186193.8 TPM= 3.62 Transcript Type= NA chr9 137077440 137084537 137077440 137084537 + transcript3821.chr9.nic@UAP1L1 transcript3821.chr9.nic protein_coding 137077440,137078502,137078976,137079256,137080002,137080689,137081998,137082637 137077821,137078677,137079148,137079449,137080142,137080874,137082064,137084537 Gene ID= ENSG00000197355.10 TPM= 3.17 Transcript Type= NA chr9 137077501 137084538 137077501 137084538 + ENST00000409858.7@UAP1L1 ENST00000409858.7 protein_coding 137077501,137078050,137078502,137078976,137079256,137080002,137080689,137081998,137082637 137077821,137078254,137078677,137079148,137079449,137080142,137080874,137082064,137084538 Gene ID= ENSG00000197355.10 TPM= 20.37 Transcript Type= protein_coding chr9 137086969 137109185 137086969 137109185 + transcript3806.chr9.nic@MAN1B1 transcript3806.chr9.nic protein_coding 137086969,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108531 137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109185 Gene ID= ENSG00000177239.14 TPM= 7.24 Transcript Type= NA chr9 137086927 137109187 137086927 137109187 + ENST00000371589.8@MAN1B1 ENST00000371589.8 protein_coding 137086927,137088075,137088869,137096237,137097828,137099696,137101005,137101484,137106125,137106689,137107250,137107531,137108388 137087218,137088183,137089005,137096391,137097937,137099881,137101153,137101672,137106315,137106809,137107447,137107662,137109187 Gene ID= ENSG00000177239.14 TPM= 216.72 Transcript Type= protein_coding chr9 137110540 137114749 137110540 137114749 - transcript3840.chr9.nic@DPP7 transcript3840.chr9.nic protein_coding 137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110540 137114749,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783 Gene ID= ENSG00000176978.13 TPM= 37.41 Transcript Type= NA chr9 137110540 137114758 137110540 137114758 - transcript3848.chr9.nic@DPP7 transcript3848.chr9.nic protein_coding 137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110540 137114758,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783 Gene ID= ENSG00000176978.13 TPM= 72.15 Transcript Type= NA chr9 137110540 137114749 137110540 137114749 - transcript3861.chr9.nic@DPP7 transcript3861.chr9.nic protein_coding 137114463,137114243,137113865,137113361,137113206,137112953,137112112,137111873,137111690,137110880,137110540 137114749,137114382,137114028,137113496,137113287,137113119,137112805,137112029,137111754,137110950,137110783 Gene ID= ENSG00000176978.13 TPM= 29.59 Transcript Type= NA chr9 137110542 137114718 137110542 137114718 - ENST00000371579.6@DPP7 ENST00000371579.6 protein_coding 137114647,137114463,137114243,137113865,137113361,137113206,137112953,137112745,137112112,137111873,137111690,137110880,137110542 137114718,137114576,137114382,137114028,137113496,137113287,137113119,137112805,137112230,137112029,137111754,137110950,137110783 Gene ID= ENSG00000176978.13 TPM= 585.26 Transcript Type= protein_coding chr9 137174784 137188575 137174784 137188575 - transcript3897.chr9.nnic@ANAPC2 transcript3897.chr9.nnic protein_coding 137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175237,137174784 137188575,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175472,137175154 Gene ID= ENSG00000176248.8 TPM= 1.81 Transcript Type= NA chr9 137174784 137188726 137174784 137188726 - transcript3898.chr9.nic@ANAPC2 transcript3898.chr9.nic protein_coding 137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137174784 137188726,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472 Gene ID= ENSG00000176248.8 TPM= 3.62 Transcript Type= NA chr9 137174784 137188537 137174784 137188537 - ENST00000323927.2@ANAPC2 ENST00000323927.2 protein_coding 137188416,137187481,137186224,137184913,137183672,137183125,137181681,137180788,137180452,137180181,137175708,137175237,137174784 137188537,137188103,137186356,137185087,137183791,137183242,137181862,137180929,137180527,137180384,137175837,137175472,137175154 Gene ID= ENSG00000176248.8 TPM= 23.54 Transcript Type= protein_coding chr9 137188660 137190370 137188660 137190370 + ENST00000459860.1@SSNA1 ENST00000459860.1 protein_coding 137188660,137189807 137189265,137190370 Gene ID= ENSG00000176101.11 TPM= 43.01 Transcript Type= retained_intron chr9 137188647 137190370 137188647 137190370 + ENST00000322310.9@SSNA1 ENST00000322310.9 protein_coding 137188647,137189066,137189807 137188778,137189265,137190370 Gene ID= ENSG00000176101.11 TPM= 55.69 Transcript Type= protein_coding chr9 137188706 137190370 137188706 137190370 + ENST00000464553.2@SSNA1 ENST00000464553.2 protein_coding 137188706,137189066,137189807 137188778,137189151,137190370 Gene ID= ENSG00000176101.11 TPM= 13.58 Transcript Type= protein_coding chr9 137191617 137200798 137191617 137200798 - ENST00000409012.4@TPRN ENST00000409012.4 protein_coding 137198987,137192451,137192259,137191617 137200798,137192691,137192365,137192174 Gene ID= ENSG00000176058.11 TPM= 28.52 Transcript Type= protein_coding chr9 137191617 137205668 137191617 137205668 - transcript3920.chr9.nic@TPRN transcript3920.chr9.nic protein_coding 137204104,137192451,137192259,137191617 137205668,137192691,137192365,137192174 Gene ID= ENSG00000176058.11 TPM= 104.59 Transcript Type= NA chr9 137241213 137243707 137241213 137243707 + ENST00000340384.4@TUBB4B ENST00000340384.4 protein_coding 137241213,137241721,137241911,137242496 137241417,137241829,137242021,137243707 Gene ID= ENSG00000188229.5 TPM= 194.69 Transcript Type= protein_coding chr9 137255173 137273546 137255173 137273546 + ENST00000343053.4@NELFB ENST00000343053.4 protein_coding 137255173,137255907,137256329,137256824,137263037,137264245,137265877,137266331,137266944,137267240,137272081,137272507,137272782 137255611,137256070,137256428,137257054,137263222,137264357,137265979,137266426,137267086,137267346,137272222,137272615,137273546 Gene ID= ENSG00000188986.6 TPM= 229.04 Transcript Type= protein_coding chr9 137277749 137282641 137277749 137282641 + ENST00000357503.2@TOR4A ENST00000357503.2 protein_coding 137277749,137278653 137277907,137282641 Gene ID= ENSG00000198113.2 TPM= 18.11 Transcript Type= protein_coding chr9 137306895 137423170 137306895 137423170 - transcript3943.chr9.nnic@EXD3 transcript3943.chr9.nnic protein_coding 137423114,137395303,137383313,137373426,137372905,137367936,137366493,137358327,137357257,137356268,137354567,137354339,137352873,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306895 137423170,137395404,137383377,137373599,137373072,137367989,137366632,137358606,137357306,137356368,137354773,137354377,137354105,137352786,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263 Gene ID= ENSG00000187609.15 TPM= 1.81 Transcript Type= NA chr9 137306895 137423177 137306895 137423177 - transcript3947.chr9.nnic@EXD3 transcript3947.chr9.nnic protein_coding 137423114,137395303,137383313,137373426,137372905,137367936,137366493,137356268,137354567,137354339,137352620,137352066,137351318,137351038,137349369,137349110,137348071,137324090,137323725,137309607,137307608,137306895 137423177,137395404,137383377,137373599,137373072,137367989,137366632,137356368,137354773,137354377,137354105,137352201,137351528,137351147,137349531,137349282,137348238,137324143,137323856,137309700,137307646,137307263 Gene ID= ENSG00000187609.15 TPM= 1.81 Transcript Type= NA chr9 137366146 137423244 137366146 137423244 - transcript3986.chr9.nic@EXD3 transcript3986.chr9.nic protein_coding 137423114,137395303,137383313,137373426,137372905,137367936,137366146 137423244,137395404,137383377,137373599,137373072,137367989,137366632 Gene ID= ENSG00000187609.15 TPM= 2.72 Transcript Type= NA chr9 137366145 137423155 137366145 137423155 - ENST00000479452.5@EXD3 ENST00000479452.5 protein_coding 137423114,137395303,137383313,137373426,137372905,137367936,137366493,137366145 137423155,137395404,137383377,137373599,137373072,137367989,137366632,137366361 Gene ID= ENSG00000187609.15 TPM= 9.06 Transcript Type= protein_coding chr9 137391802 137423162 137391802 137423162 - ENST00000465160.2@EXD3 ENST00000465160.2 protein_coding 137423114,137395303,137391802 137423162,137395404,137393235 Gene ID= ENSG00000187609.15 TPM= 1.81 Transcript Type= protein_coding chr9 137422763 137434446 137422763 137434446 + transcript3951.chr9.nnic@NOXA1 transcript3951.chr9.nnic protein_coding 137422763,137426248,137427921,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434224 137423706,137426330,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 4.63 Transcript Type= NA chr9 137423228 137434446 137423228 137434446 + transcript3955.chr9.nnic@NOXA1 transcript3955.chr9.nnic protein_coding 137423228,137426248,137428033,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434224 137423706,137426330,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 10.97 Transcript Type= NA chr9 137423326 137434446 137423326 137434446 + transcript3962.chr9.nnic@NOXA1 transcript3962.chr9.nnic protein_coding 137423326,137426248,137428033,137428882,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434224 137423706,137426330,137428141,137429016,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 3.72 Transcript Type= NA chr9 137423384 137434446 137423384 137434446 + transcript3963.chr9.nnic@NOXA1 transcript3963.chr9.nnic protein_coding 137423384,137426248,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434224 137423706,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 1.91 Transcript Type= NA chr9 137423343 137434446 137423343 137434446 + transcript3964.chr9.nnic@NOXA1 transcript3964.chr9.nnic protein_coding 137423343,137426248,137427921,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433965,137434224 137423706,137426330,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 7.93 Transcript Type= NA chr9 137423384 137434446 137423384 137434446 + transcript3975.chr9.nnic@NOXA1 transcript3975.chr9.nnic protein_coding 137423384,137426248,137428033,137428882,137430784,137431075,137431236,137433029,137433205,137433965,137434224 137423706,137426330,137428141,137429383,137430843,137431100,137431341,137433074,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 2.5 Transcript Type= NA chr9 137423349 137434446 137423349 137434446 + transcript3977.chr9.nnic@NOXA1 transcript3977.chr9.nnic protein_coding 137423349,137426248,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433965,137434224 137423706,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 2.5 Transcript Type= NA chr9 137423402 137434446 137423402 137434446 + transcript3978.chr9.nnic@NOXA1 transcript3978.chr9.nnic protein_coding 137423402,137426248,137427921,137428882,137430784,137431236,137433029,137433205,137433965,137434224 137423706,137426330,137428141,137429383,137431100,137431341,137433074,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 2.27 Transcript Type= NA chr9 137423402 137434446 137423402 137434446 + transcript3979.chr9.nnic@NOXA1 transcript3979.chr9.nnic protein_coding 137423402,137426248,137428882,137430784,137431075,137431236,137433029,137433205,137433965,137434224 137423706,137428141,137429383,137430843,137431100,137431341,137433074,137433864,137434079,137434446 Gene ID= ENSG00000188747.8 TPM= 2.5 Transcript Type= NA chr9 137423350 137434406 137423350 137434406 + ENST00000341349.6@NOXA1 ENST00000341349.6 protein_coding 137423350,137426248,137428033,137428882,137429276,137430784,137431075,137431236,137433029,137433205,137433453,137433750,137433965,137434203 137423706,137426330,137428141,137429016,137429383,137430843,137431100,137431341,137433074,137433263,137433607,137433864,137434079,137434406 Gene ID= ENSG00000188747.8 TPM= 10.87 Transcript Type= protein_coding chr9 137447573 137459356 137447573 137459356 - transcript4002.chr9.nnic@NSMF transcript4002.chr9.nnic protein_coding 137459032,137458488,137457407,137456411,137454391,137453739,137450176,137449923,137449599,137447573 137459356,137458549,137457901,137456486,137454443,137453820,137450190,137450025,137449674,137449491 Gene ID= ENSG00000165802.22 TPM= 4.53 Transcript Type= NA chr9 137448232 137459334 137448232 137459334 - ENST00000265663.12@NSMF ENST00000265663.12 protein_coding 137459032,137458488,137457407,137456411,137455239,137454391,137453731,137453056,137452736,137452553,137452365,137450176,137449923,137449599,137448232 137459334,137458549,137457901,137456486,137455307,137454443,137453820,137453180,137452819,137452586,137452435,137450255,137450025,137449674,137449491 Gene ID= ENSG00000165802.22 TPM= 32.6 Transcript Type= protein_coding chr9 137551199 137552555 137551199 137552555 + ENST00000371443.5@MRPL41 ENST00000371443.5 protein_coding 137551199,137552074 137551978,137552555 Gene ID= ENSG00000182154.7 TPM= 112.29 Transcript Type= protein_coding chr9 137554865 137578925 137554865 137578925 - transcript4017.chr9.nnic@DPH7 transcript4017.chr9.nnic protein_coding 137578625,137577470,137576309,137576080,137575709,137574752,137574208,137565085,137564893,137564434,137554865 137578925,137577603,137576402,137576167,137575894,137574846,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 2.02 Transcript Type= NA chr9 137554865 137578925 137554865 137578925 - transcript4020.chr9.nic@DPH7 transcript4020.chr9.nic protein_coding 137578625,137577470,137576309,137575709,137574752,137574208,137565085,137564893,137564434,137554865 137578925,137577603,137576402,137576167,137574843,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 4.73 Transcript Type= NA chr9 137554865 137578925 137554865 137578925 - transcript4021.chr9.nic@DPH7 transcript4021.chr9.nic protein_coding 137578625,137577470,137576309,137576080,137574752,137574208,137565085,137564893,137564434,137554865 137578925,137577603,137576402,137576167,137574843,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 2.92 Transcript Type= NA chr9 137554865 137578877 137554865 137578877 - transcript4026.chr9.nic@DPH7 transcript4026.chr9.nic protein_coding 137578625,137576309,137576080,137574752,137574208,137565085,137564893,137564434,137554865 137578877,137576402,137576167,137574843,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 2.02 Transcript Type= NA chr9 137554865 137578925 137554865 137578925 - transcript4029.chr9.nic@DPH7 transcript4029.chr9.nic protein_coding 137578625,137577470,137576309,137574752,137574208,137565085,137564893,137564434,137554865 137578925,137577603,137576402,137576167,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 4.62 Transcript Type= NA chr9 137554865 137578924 137554865 137578924 - transcript4031.chr9.nic@DPH7 transcript4031.chr9.nic protein_coding 137578625,137576080,137574752,137574208,137565085,137564893,137564434,137554865 137578924,137576167,137574843,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 3.82 Transcript Type= NA chr9 137554865 137578925 137554865 137578925 - transcript4035.chr9.nic@DPH7 transcript4035.chr9.nic protein_coding 137578625,137577470,137574752,137574208,137565085,137564893,137564434,137554865 137578925,137577603,137576167,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 2.81 Transcript Type= NA chr9 137554865 137578925 137554865 137578925 - transcript4044.chr9.nic@DPH7 transcript4044.chr9.nic protein_coding 137578625,137574752,137574208,137564434,137554865 137578925,137577603,137574380,137565154,137555648 Gene ID= ENSG00000148399.12 TPM= 2.72 Transcript Type= NA chr9 137554909 137578935 137554909 137578935 - ENST00000277540.6@DPH7 ENST00000277540.6 protein_coding 137578625,137577470,137576080,137574752,137574208,137565085,137564893,137564434,137554909 137578935,137577603,137576167,137574843,137574380,137565154,137564958,137564606,137555648 Gene ID= ENSG00000148399.12 TPM= 11.07 Transcript Type= protein_coding chr9 137582202 137590532 137582202 137590532 - transcript4042.chr9.nnic@ZMYND19 transcript4042.chr9.nnic protein_coding 137589404,137588659,137587717,137586967,137582983,137582202 137590532,137588718,137587823,137587561,137583163,137582686 Gene ID= ENSG00000165724.5 TPM= 1.81 Transcript Type= NA chr9 137582068 137590518 137582068 137590518 - transcript4046.chr9.nic@ZMYND19 transcript4046.chr9.nic protein_coding 137590213,137588659,137586967,137582983,137582068 137590518,137588718,137587823,137583163,137582686 Gene ID= ENSG00000165724.5 TPM= 3.62 Transcript Type= NA chr9 137582079 137590490 137582079 137590490 - ENST00000298585.2@ZMYND19 ENST00000298585.2 protein_coding 137590213,137588659,137587717,137586967,137582983,137582079 137590490,137588718,137587823,137587107,137583163,137582686 Gene ID= ENSG00000165724.5 TPM= 28.98 Transcript Type= protein_coding chr9 137605660 137615359 137605660 137615359 + transcript4048.chr9.nic@ARRDC1 transcript4048.chr9.nic protein_coding 137605660,137612896,137613413,137613615,137614032,137614299,137614559,137615074 137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615359 Gene ID= ENSG00000197070.13 TPM= 1.81 Transcript Type= NA chr9 137605683 137615359 137605683 137615359 + transcript4050.chr9.nnic@ARRDC1 transcript4050.chr9.nnic protein_coding 137605683,137612896,137613460,137613615,137614032,137614299,137614559,137615074 137605835,137613006,137613510,137613664,137614214,137614475,137615000,137615359 Gene ID= ENSG00000197070.13 TPM= 2.72 Transcript Type= NA chr9 137605587 137615359 137605587 137615359 + transcript4056.chr9.nic@ARRDC1 transcript4056.chr9.nic protein_coding 137605587,137612896,137613460,137613615,137614032,137614299,137614559 137605835,137613006,137613510,137613769,137614214,137614475,137615359 Gene ID= ENSG00000197070.13 TPM= 11.77 Transcript Type= NA chr9 137605587 137616205 137605587 137616205 + transcript4059.chr9.nic@ARRDC1 transcript4059.chr9.nic protein_coding 137605587,137612896,137613615,137614032,137614299,137614559,137615074 137605835,137613510,137613769,137614214,137614475,137615000,137616205 Gene ID= ENSG00000197070.13 TPM= 3.62 Transcript Type= NA chr9 137605647 137615359 137605647 137615359 + transcript4062.chr9.nic@ARRDC1 transcript4062.chr9.nic protein_coding 137605647,137612896,137613615,137614032,137614299,137614559 137605835,137613510,137613769,137614214,137614475,137615359 Gene ID= ENSG00000197070.13 TPM= 1.81 Transcript Type= NA chr9 137605686 137615359 137605686 137615359 + transcript4063.chr9.nnic@ARRDC1 transcript4063.chr9.nnic protein_coding 137605686,137613460,137613615,137614032,137614299,137614559 137605835,137613510,137613769,137614214,137614475,137615359 Gene ID= ENSG00000197070.13 TPM= 1.81 Transcript Type= NA chr9 137605654 137615358 137605654 137615358 + ENST00000371421.8@ARRDC1 ENST00000371421.8 protein_coding 137605654,137612896,137613460,137613615,137614032,137614299,137614559,137615074 137605835,137613006,137613510,137613769,137614214,137614475,137615000,137615358 Gene ID= ENSG00000197070.13 TPM= 54.33 Transcript Type= protein_coding chr9 137615332 137618813 137615332 137618813 - ENST00000371417.3@ARRDC1-AS1 ENST00000371417.3 antisense_RNA 137618531,137617934,137615332 137618813,137618191,137616199 Gene ID= ENSG00000203993.4 TPM= 5.43 Transcript Type= antisense_RNA chr9 137618952 137836124 137618952 137836124 + transcript4070.chr9.nic@EHMT1 transcript4070.chr9.nic protein_coding 137618952,137710967,137716626,137728349,137743392,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137790848,137798813,137800880,137811461,137813006,137813386,137814431,137815947,137817439,137818060,137834349,137834773 137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137790970,137798914,137800984,137811615,137813173,137813530,137814508,137816062,137817525,137818138,137834524,137836124 Gene ID= ENSG00000181090.20 TPM= 19.47 Transcript Type= NA chr9 137618963 137836127 137618963 137836127 + ENST00000460843.5@EHMT1 ENST00000460843.5 protein_coding 137618963,137710967,137716626,137728349,137743371,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137790848,137798813,137800880,137811461,137813006,137813386,137814431,137815947,137817439,137818060,137834349,137834773 137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137790970,137798914,137800984,137811615,137813173,137813530,137814508,137816062,137817525,137818138,137834524,137836127 Gene ID= ENSG00000181090.20 TPM= 35.32 Transcript Type= protein_coding chr9 137618992 137784393 137618992 137784393 + ENST00000462484.5@EHMT1 ENST00000462484.5 protein_coding 137618992,137710967,137716626,137728349,137743371,137743902,137752331,137754171,137757880,137762675,137775109,137776618,137777882,137779635,137782291,137784106 137619049,137711030,137717182,137728529,137743528,137744090,137752408,137754291,137758011,137762820,137775252,137776844,137778055,137779717,137782397,137784393 Gene ID= ENSG00000181090.20 TPM= 3.17 Transcript Type= protein_coding chr10 134939 254627 134939 254627 + transcript5.chr10.nnic@ZMYND11 transcript5.chr10.nnic protein_coding 134939,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348 135203,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254627 Gene ID= ENSG00000015171.19 TPM= 8.24 Transcript Type= NA chr10 135424 254627 135424 254627 + transcript7.chr10.nic@ZMYND11 transcript7.chr10.nic protein_coding 135424,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348 135559,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254627 Gene ID= ENSG00000015171.19 TPM= 34.5 Transcript Type= NA chr10 134922 254627 134922 254627 + transcript9.chr10.nic@ZMYND11 transcript9.chr10.nic protein_coding 134922,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348 135302,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254627 Gene ID= ENSG00000015171.19 TPM= 6.43 Transcript Type= NA chr10 135069 254637 135069 254637 + ENST00000381591.5@ZMYND11 ENST00000381591.5 protein_coding 135069,179994,209889,221195,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348 135302,180128,210048,221356,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254637 Gene ID= ENSG00000015171.19 TPM= 10.05 Transcript Type= protein_coding chr10 135484 254626 135484 254626 + ENST00000381607.8@ZMYND11 ENST00000381607.8 protein_coding 135484,179994,209889,236838,237585,239438,240056,240893,242021,246766,247398,248336,248903,252348 135559,180128,210048,236915,237677,239525,240111,240970,242139,246973,247466,248608,249088,254626 Gene ID= ENSG00000015171.19 TPM= 5.52 Transcript Type= protein_coding chr10 135509 254634 135509 254634 + ENST00000402736.5@ZMYND11 ENST00000402736.5 protein_coding 135509,179994,209889,221195,236838,239438,240056,240893,242021,246766,247398,248336,248903,252348 135559,180128,210048,221356,236915,239525,240111,240970,242139,246973,247466,248608,249088,254634 Gene ID= ENSG00000015171.19 TPM= 1.36 Transcript Type= protein_coding chr10 274462 486532 274462 486532 - transcript15.chr10.nic@DIP2C transcript15.chr10.nic protein_coding 486459,484781,472439,440871,422824,419065,415769,413913,408926,399109,390740,390264,389991,387745,384546,384027,382647,369494,366275,364374,363197,362490,357828,356426,349331,348641,344999,344809,341199,329433,327006,311537,310031,288364,286273,283272,281200,274462 486532,484948,472549,440996,423033,419199,415888,414110,409017,399219,390863,390373,390093,387809,384639,384146,382761,369633,366411,364582,363311,362691,357937,356506,349454,348762,345110,344918,341329,329601,327176,311566,310092,288421,286347,283446,281323,277577 Gene ID= ENSG00000151240.16 TPM= 5.43 Transcript Type= NA chr10 988019 1019936 988019 1019936 + ENST00000360803.8@GTPBP4 ENST00000360803.8 protein_coding 988019,992489,995929,996106,997208,999003,1000677,1000948,1005818,1007018,1008958,1009529,1010420,1012465,1014247,1015753,1017075 988527,992659,996032,996242,997308,999095,1000868,1001013,1005907,1007128,1009035,1009580,1010520,1012662,1014312,1015896,1019936 Gene ID= ENSG00000107937.18 TPM= 58.11 Transcript Type= protein_coding chr10 988386 1019928 988386 1019928 + transcript27.chr10.nnic@GTPBP4 transcript27.chr10.nnic protein_coding 988386,992489,995929,996106,997208,999003,1000677,1000948,1007018,1008958,1009529,1010420,1012465,1014247,1015753,1017075 988527,992659,996032,996242,997308,999095,1000868,1001013,1007128,1009035,1009580,1010520,1012662,1014312,1015896,1019928 Gene ID= ENSG00000107937.18 TPM= 4.23 Transcript Type= NA chr10 988386 1019928 988386 1019928 + transcript29.chr10.nic@GTPBP4 transcript29.chr10.nic protein_coding 988386,992489,995929,996106,999003,1000677,1000948,1005818,1007018,1008958,1009529,1010420,1012465,1014247,1015753,1017075 988527,992659,996032,997308,999095,1000868,1001013,1005907,1007128,1009035,1009580,1010520,1012662,1014312,1015896,1019928 Gene ID= ENSG00000107937.18 TPM= 3.78 Transcript Type= NA chr10 1039908 1049170 1039908 1049170 - ENST00000381344.7@IDI1 ENST00000381344.7 protein_coding 1048864,1043999,1043301,1042632,1039908 1049170,1044171,1043393,1042762,1041504 Gene ID= ENSG00000067064.10 TPM= 67.01 Transcript Type= protein_coding chr10 1056858 1132170 1056858 1132170 + ENST00000263150.8@WDR37 ENST00000263150.8 protein_coding 1056858,1072116,1077907,1080011,1080412,1084403,1086286,1093452,1096170,1103602,1105126,1124218,1124910,1129213 1056968,1072293,1078003,1080106,1080476,1084538,1086357,1093496,1096246,1103836,1105267,1124352,1125024,1132170 Gene ID= ENSG00000047056.14 TPM= 4.53 Transcript Type= protein_coding chr10 3069079 3136801 3069079 3136801 + transcript50.chr10.nic@PFKP transcript50.chr10.nic protein_coding 3069079,3082388,3099275,3101365,3103779,3105115,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450 3069389,3082461,3099352,3101554,3103944,3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136801 Gene ID= ENSG00000067057.16 TPM= 4.53 Transcript Type= NA chr10 3067520 3136802 3067520 3136802 + ENST00000381125.8@PFKP ENST00000381125.8 protein_coding 3067520,3082388,3099275,3101365,3103779,3105115,3105393,3107214,3108701,3109355,3112222,3113119,3113372,3116776,3118782,3119892,3129819,3132380,3133203,3134483,3135736,3136450 3067707,3082461,3099352,3101554,3103944,3105159,3105501,3107309,3108793,3109480,3112286,3113188,3113518,3116846,3118869,3120044,3129983,3132441,3133314,3134582,3135838,3136802 Gene ID= ENSG00000067057.16 TPM= 64.29 Transcript Type= protein_coding chr10 3137728 3172782 3137728 3172782 - transcript53.chr10.nnic@PITRM1 transcript53.chr10.nnic protein_coding 3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148171,3147987,3147572,3147150,3145596,3144292,3143606,3143389,3140687,3138904,3138235,3137728 3172782,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143731,3143501,3140812,3139049,3138337,3138124 Gene ID= ENSG00000107959.15 TPM= 6.57 Transcript Type= NA chr10 3137730 3172841 3137730 3172841 - ENST00000380989.6@PITRM1 ENST00000380989.6 protein_coding 3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3148168,3147987,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137730 3172841,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3148291,3148063,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124 Gene ID= ENSG00000107959.15 TPM= 108.44 Transcript Type= protein_coding chr10 3137728 3172834 3137728 3172834 - transcript62.chr10.nic@PITRM1 transcript62.chr10.nic protein_coding 3172717,3170104,3166936,3166229,3165413,3165238,3163725,3160204,3159848,3158914,3158040,3157435,3156930,3155591,3151247,3149621,3147572,3147150,3145596,3144292,3143389,3140687,3138904,3138235,3137728 3172834,3170206,3167042,3166380,3165527,3165334,3163885,3160330,3159936,3159042,3158153,3157531,3157064,3155729,3151363,3149753,3147737,3147250,3145716,3144366,3143501,3140812,3139049,3138337,3138124 Gene ID= ENSG00000107959.15 TPM= 4.3 Transcript Type= NA chr10 3775996 3785275 3775996 3785275 - ENST00000497571.5@KLF6 ENST00000497571.5 protein_coding 3784913,3781641,3780106,3775996 3785275,3782214,3780229,3779590 Gene ID= ENSG00000067082.14 TPM= 45.28 Transcript Type= protein_coding chr10 4963253 4983283 4963253 4983283 + ENST00000380872.8@AKR1C1 ENST00000380872.8 protein_coding 4963253,4965914,4966927,4968309,4968822,4972201,4972584,4975851,4977700 4963528,4966081,4967043,4968386,4968944,4972310,4972749,4975933,4983283 Gene ID= ENSG00000187134.13 TPM= 1.81 Transcript Type= protein_coding chr10 4987400 5004023 4987400 5004023 - ENST00000380753.8@AKR1C2 ENST00000380753.8 protein_coding 5003752,5001514,5000550,4999200,4998625,4995756,4995319,4991831,4987400 5004023,5001681,5000666,4999277,4998747,4995865,4995484,4991913,4990038 Gene ID= ENSG00000151632.17 TPM= 2.72 Transcript Type= protein_coding chr10 5093793 5107686 5093793 5107686 + ENST00000380554.4@AKR1C3 ENST00000380554.4 protein_coding 5093793,5096410,5097434,5098802,5099327,5102101,5102485,5105595,5107461 5094528,5096577,5097550,5098879,5099449,5102210,5102650,5105677,5107686 Gene ID= ENSG00000196139.13 TPM= 56.14 Transcript Type= protein_coding chr10 5412551 5458463 5412551 5458463 + ENST00000355029.8@NET1 ENST00000355029.8 protein_coding 5412551,5426655,5429170,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588 5412820,5426721,5429229,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463 Gene ID= ENSG00000173848.18 TPM= 4.98 Transcript Type= protein_coding chr10 5446611 5458463 5446611 5458463 + ENST00000380359.3@NET1 ENST00000380359.3 protein_coding 5446611,5451830,5452358,5452858,5453250,5453484,5454265,5454948,5456087,5456588 5446858,5451937,5452525,5452920,5453346,5453560,5454522,5455118,5456273,5458463 Gene ID= ENSG00000173848.18 TPM= 5.89 Transcript Type= protein_coding chr10 5638868 5666597 5638868 5666597 - transcript86.chr10.nic@ASB13 transcript86.chr10.nic protein_coding 5666509,5652863,5651213,5648970,5641770,5640696,5638868 5666597,5653050,5651363,5649104,5641961,5640830,5639371 Gene ID= ENSG00000196372.12 TPM= 5.43 Transcript Type= NA chr10 5638868 5666578 5638868 5666578 - ENST00000357700.10@ASB13 ENST00000357700.10 protein_coding 5666509,5652863,5651213,5648970,5641770,5638868 5666578,5653050,5651363,5649104,5641961,5640830 Gene ID= ENSG00000196372.12 TPM= 81.8 Transcript Type= protein_coding chr10 5638868 5666595 5638868 5666595 - ENST00000479033.1@ASB13 ENST00000479033.1 protein_coding 5666509,5652863,5648970,5641770,5638868 5666595,5653050,5649104,5641961,5640830 Gene ID= ENSG00000196372.12 TPM= 3.02 Transcript Type= processed_transcript chr10 5638868 5666578 5638868 5666578 - ENST00000459912.5@ASB13 ENST00000459912.5 protein_coding 5666509,5652863,5651213,5648970,5642473,5641770,5638868 5666578,5653050,5651363,5649104,5642553,5641961,5640830 Gene ID= ENSG00000196372.12 TPM= 4.83 Transcript Type= nonsense_mediated_decay chr10 5878089 5889898 5878089 5889898 - transcript144.chr10.nnic@ANKRD16 transcript144.chr10.nnic protein_coding 5889041,5887847,5885723,5883969,5883006,5880298,5878089 5889898,5888241,5885765,5884077,5883167,5880376,5878287 Gene ID= ENSG00000134461.15 TPM= 1.81 Transcript Type= NA chr10 5878087 5889871 5878087 5889871 - ENST00000380092.8@ANKRD16 ENST00000380092.8 protein_coding 5889041,5887847,5885723,5883969,5883006,5880298,5878087 5889871,5888067,5885765,5884077,5883167,5880376,5878287 Gene ID= ENSG00000134461.15 TPM= 4.53 Transcript Type= protein_coding chr10 5878122 5889906 5878122 5889906 - ENST00000191063.8@ANKRD16 ENST00000191063.8 protein_coding 5889041,5887847,5885723,5883969,5883006,5878122 5889906,5888067,5885765,5884077,5883167,5878287 Gene ID= ENSG00000134461.15 TPM= 1.81 Transcript Type= protein_coding chr10 5890195 5937625 5890195 5937625 + transcript111.chr10.nic@FBXO18 transcript111.chr10.nic protein_coding 5890195,5903020,5905218,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110 5890346,5903175,5905287,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937625 Gene ID= ENSG00000134452.19 TPM= 8.68 Transcript Type= NA chr10 5890243 5937625 5890243 5937625 + transcript117.chr10.nnic@FBXO18 transcript117.chr10.nnic protein_coding 5890243,5895056,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110 5890346,5895187,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937625 Gene ID= ENSG00000134452.19 TPM= 10.5 Transcript Type= NA chr10 5890206 5937625 5890206 5937625 + transcript133.chr10.nic@FBXO18 transcript133.chr10.nic protein_coding 5890206,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110 5890346,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937625 Gene ID= ENSG00000134452.19 TPM= 28.61 Transcript Type= NA chr10 5890214 5937625 5890214 5937625 + transcript135.chr10.nnic@FBXO18 transcript135.chr10.nnic protein_coding 5890214,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110 5890346,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937625 Gene ID= ENSG00000134452.19 TPM= 8.68 Transcript Type= NA chr10 5890231 5937593 5890231 5937593 + ENST00000362091.8@FBXO18 ENST00000362091.8 protein_coding 5890231,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5925367,5927435,5936456,5937110 5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5925492,5927541,5936587,5937593 Gene ID= ENSG00000134452.19 TPM= 128.22 Transcript Type= protein_coding chr10 5890203 5937594 5890203 5937594 + ENST00000397269.7@FBXO18 ENST00000397269.7 protein_coding 5890203,5903020,5906037,5908925,5909159,5910938,5913747,5914178,5915403,5916234,5917420,5917590,5918342,5921258,5921448,5923621,5924311,5924751,5925367,5927435,5936456,5937110 5890346,5903175,5906632,5909055,5909294,5911128,5913839,5914269,5915571,5916456,5917507,5917676,5918478,5921357,5921569,5923696,5924508,5924801,5925492,5927541,5936587,5937594 Gene ID= ENSG00000134452.19 TPM= 6.52 Transcript Type= protein_coding chr10 5952372 5977611 5952372 5977611 - ENST00000397248.6@IL15RA ENST00000397248.6 protein_coding 5977405,5968776,5966145,5963743,5960367,5959754,5956379,5952372 5977611,5968928,5966339,5963841,5960567,5959786,5956454,5953206 Gene ID= ENSG00000134470.20 TPM= 1.2 Transcript Type= protein_coding chr10 5952372 5978187 5952372 5978187 - ENST00000525219.6@IL15RA ENST00000525219.6 protein_coding 5977777,5966145,5963743,5960367,5959754,5956379,5952372 5978187,5966339,5963841,5960567,5959786,5956454,5953206 Gene ID= ENSG00000134470.20 TPM= 1.2 Transcript Type= protein_coding chr10 5952371 5977590 5952371 5977590 - ENST00000379977.7@IL15RA ENST00000379977.7 protein_coding 5977405,5966145,5963743,5960367,5959754,5956379,5952371 5977590,5966339,5963841,5960567,5959786,5956454,5953206 Gene ID= ENSG00000134470.20 TPM= 3.02 Transcript Type= protein_coding chr10 6010689 6062325 6010689 6062325 - ENST00000379959.7@IL2RA ENST00000379959.7 protein_coding 6062088,6025834,6024244,6021478,6019870,6019428,6018053,6010689 6062325,6026025,6024354,6021693,6019941,6019499,6018119,6012896 Gene ID= ENSG00000134460.15 TPM= 4.53 Transcript Type= protein_coding chr10 6088990 6116831 6088990 6116831 + transcript162.chr10.nic@RBM17 transcript162.chr10.nic protein_coding 6088990,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6114049,6115239,6115453 6089193,6097188,6101387,6105097,6106238,6108742,6110127,6113581,6114147,6115311,6116831 Gene ID= ENSG00000134453.15 TPM= 8.15 Transcript Type= NA chr10 6088987 6116880 6088987 6116880 + ENST00000379888.8@RBM17 ENST00000379888.8 protein_coding 6088987,6097048,6101271,6104931,6106141,6108686,6109986,6112210,6113508,6114049,6115239,6115453 6089193,6097188,6101387,6105097,6106238,6108742,6110127,6112361,6113581,6114147,6115311,6116880 Gene ID= ENSG00000134453.15 TPM= 95.08 Transcript Type= protein_coding chr10 6202931 6235531 6202931 6235531 + transcript167.chr10.nnic@PFKFB3 transcript167.chr10.nnic protein_coding 6202931,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895,6233274 6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6233091,6235531 Gene ID= ENSG00000170525.19 TPM= 2.87 Transcript Type= NA chr10 6202931 6235533 6202931 6235533 + transcript174.chr10.nic@PFKFB3 transcript174.chr10.nic protein_coding 6202931,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6232895 6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6235533 Gene ID= ENSG00000170525.19 TPM= 9.12 Transcript Type= NA chr10 6144934 6235532 6144934 6235532 + ENST00000379789.8@PFKFB3 ENST00000379789.8 protein_coding 6144934,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895 6145013,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532 Gene ID= ENSG00000170525.19 TPM= 48.06 Transcript Type= protein_coding chr10 6202931 6235532 6202931 6235532 + ENST00000379775.8@PFKFB3 ENST00000379775.8 protein_coding 6202931,6213623,6215221,6216125,6216706,6217135,6219569,6220658,6221381,6221641,6222855,6223958,6224149,6226192,6232895 6203336,6213748,6215317,6216191,6216780,6217191,6219693,6220865,6221527,6221745,6222984,6224020,6224213,6226365,6235532 Gene ID= ENSG00000170525.19 TPM= 58.02 Transcript Type= protein_coding chr10 7755805 7787991 7755805 7787991 - transcript188.chr10.nnic@KIN transcript188.chr10.nnic protein_coding 7787820,7780264,7780056,7778838,7775751,7774831,7769216,7766053,7763723,7762457,7759890,7755805 7787991,7780307,7780178,7779019,7775799,7774891,7769345,7766103,7763791,7762556,7759990,7756142 Gene ID= ENSG00000151657.11 TPM= 3.62 Transcript Type= NA chr10 7788129 7807815 7788129 7807815 + ENST00000356708.11@ATP5C1 ENST00000356708.11 protein_coding 7788129,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7806974,7807659 7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807010,7807815 Gene ID= ENSG00000165629.19 TPM= 613.35 Transcript Type= protein_coding chr10 7788147 7807801 7788147 7807801 + ENST00000493053.5@ATP5C1 ENST00000493053.5 protein_coding 7788147,7797047,7798990,7799772,7800027,7802270,7802758,7806974,7807659 7788263,7797178,7799194,7799915,7800091,7802425,7802854,7807010,7807801 Gene ID= ENSG00000165629.19 TPM= 17.96 Transcript Type= processed_transcript chr10 7788177 7807815 7788177 7807815 + ENST00000335698.4@ATP5C1 ENST00000335698.4 protein_coding 7788177,7796121,7797047,7798990,7799772,7800027,7802270,7802758,7807659 7788263,7796155,7797178,7799194,7799915,7800091,7802425,7802854,7807815 Gene ID= ENSG00000165629.19 TPM= 12.22 Transcript Type= protein_coding chr10 7788179 7807793 7788179 7807793 + ENST00000465936.5@ATP5C1 ENST00000465936.5 protein_coding 7788179,7796121,7806974,7807659 7788263,7796155,7807010,7807793 Gene ID= ENSG00000165629.19 TPM= 3.02 Transcript Type= processed_transcript chr10 8053637 8075198 8053637 8075198 + transcript201.chr10.nic@GATA3 transcript201.chr10.nic protein_coding 8053637,8055287,8058305,8063993,8069473,8073739 8053778,8055896,8058841,8064138,8069598,8075198 Gene ID= ENSG00000107485.15 TPM= 6.34 Transcript Type= NA chr10 11453946 11611754 11453946 11611754 - ENST00000609104.5@USP6NL ENST00000609104.5 protein_coding 11611443,11597631,11527500,11525386,11518535,11509595,11501101,11493119,11490832,11489102,11485817,11485169,11484971,11481770,11453946 11611754,11597717,11527567,11525468,11518574,11509675,11501208,11493228,11490880,11489222,11485911,11485234,11485070,11481922,11463849 Gene ID= ENSG00000148429.14 TPM= 17.21 Transcript Type= protein_coding chr10 11564127 11611666 11564127 11611666 - ENST00000606752.1@USP6NL ENST00000606752.1 protein_coding 11611443,11597631,11564127 11611666,11597717,11565638 Gene ID= ENSG00000148429.14 TPM= 8.15 Transcript Type= processed_transcript chr10 11742366 11764070 11742366 11764070 + ENST00000379215.8@ECHDC3 ENST00000379215.8 protein_coding 11742366,11747349,11749495,11755408,11763224 11742746,11747470,11749592,11755608,11764070 Gene ID= ENSG00000134463.14 TPM= 197.86 Transcript Type= protein_coding chr10 11823398 11872277 11823398 11872277 + ENST00000277570.9@PROSER2 ENST00000277570.9 protein_coding 11823398,11851997,11866531,11869490 11823470,11852215,11866783,11872277 Gene ID= ENSG00000148426.12 TPM= 5.43 Transcript Type= protein_coding chr10 11920023 12042819 11920023 12042819 - transcript221.chr10.nnic@UPF2 transcript221.chr10.nnic protein_coding 12042755,12035059,12028745,12014024,12004530,12001676,11999906,11997672,11967341,11964009,11959171,11956320,11955232,11952066,11948369,11943064,11942665,11936545,11931641,11929865,11920023 12042819,12035441,12029524,12014184,12004727,12001825,12000009,11997757,11967454,11964125,11959356,11956523,11955507,11952249,11948508,11943168,11942763,11936712,11931782,11929985,11921307 Gene ID= ENSG00000151461.19 TPM= 2.26 Transcript Type= NA chr10 11920022 12042834 11920022 12042834 - ENST00000357604.9@UPF2 ENST00000357604.9 protein_coding 12042755,12035059,12028745,12014024,12004530,12001676,11999906,11997672,11979057,11967341,11964009,11959171,11956320,11955232,11952066,11948369,11943064,11942665,11936545,11931641,11929865,11920022 12042834,12035441,12029524,12014184,12004727,12001825,12000009,11997757,11979165,11967454,11964125,11959356,11956523,11955507,11952249,11948508,11943168,11942763,11936712,11931782,11929985,11921307 Gene ID= ENSG00000151461.19 TPM= 10.41 Transcript Type= protein_coding chr10 12068926 12123227 12068926 12123227 + transcript226.chr10.nnic@DHTKD1 transcript226.chr10.nnic protein_coding 12068926,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12117673,12118749,12120182,12120787 12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12117755,12118918,12120267,12123227 Gene ID= ENSG00000181192.11 TPM= 8.15 Transcript Type= NA chr10 12068926 12123227 12068926 12123227 + transcript228.chr10.nnic@DHTKD1 transcript228.chr10.nnic protein_coding 12068926,12081472,12084540,12087535,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787 12069187,12081627,12084751,12087729,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12123227 Gene ID= ENSG00000181192.11 TPM= 2.72 Transcript Type= NA chr10 12068926 12122166 12068926 12122166 + transcript229.chr10.nic@DHTKD1 transcript229.chr10.nic protein_coding 12068926,12081472,12084540,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787 12069187,12081627,12084751,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12122166 Gene ID= ENSG00000181192.11 TPM= 3.62 Transcript Type= NA chr10 12068949 12123227 12068949 12123227 + transcript230.chr10.nnic@DHTKD1 transcript230.chr10.nnic protein_coding 12068949,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787 12069187,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12123227 Gene ID= ENSG00000181192.11 TPM= 2.72 Transcript Type= NA chr10 12068972 12123225 12068972 12123225 + ENST00000263035.8@DHTKD1 ENST00000263035.8 protein_coding 12068972,12081472,12084540,12087535,12088986,12091513,12094073,12097684,12100178,12101042,12106246,12107909,12112900,12117673,12118749,12120182,12120787 12069187,12081627,12084751,12087729,12089255,12091684,12094271,12097996,12100262,12101181,12106396,12108015,12113064,12117755,12118918,12120267,12123225 Gene ID= ENSG00000181192.11 TPM= 47.99 Transcript Type= protein_coding chr10 12129680 12165421 12129680 12165421 + transcript237.chr10.nic@SEC61A2 transcript237.chr10.nic protein_coding 12129680,12133241,12136105,12143117,12149595,12149852,12156907,12157908,12160930,12162213,12164268 12129794,12133308,12136170,12143195,12149726,12149961,12157067,12158105,12161121,12162289,12165421 Gene ID= ENSG00000065665.20 TPM= 2.72 Transcript Type= NA chr10 12165329 12196135 12165329 12196135 - transcript239.chr10.nnic@NUDT5 transcript239.chr10.nnic protein_coding 12195770,12186229,12184889,12179083,12177793,12172765,12170900,12170717,12165329 12196135,12186332,12184956,12179132,12177900,12172866,12170908,12170770,12167811 Gene ID= ENSG00000165609.12 TPM= 4.07 Transcript Type= NA chr10 12165329 12196135 12165329 12196135 - transcript240.chr10.nic@NUDT5 transcript240.chr10.nic protein_coding 12195770,12186229,12184889,12179083,12177793,12173718,12172765,12170717,12165329 12196135,12186332,12184956,12179132,12177900,12173813,12172866,12170908,12167811 Gene ID= ENSG00000165609.12 TPM= 7.7 Transcript Type= NA chr10 12195937 12250590 12195937 12250590 + transcript233.chr10.nic@CDC123 transcript233.chr10.nic protein_coding 12195937,12196130,12198705,12209967,12210290,12215740,12217361,12230948,12235048,12237144,12238457,12246149,12249581,12250311 12196023,12196319,12198776,12210024,12210322,12215835,12217467,12230996,12235123,12237266,12238485,12246277,12249718,12250590 Gene ID= ENSG00000151465.13 TPM= 57.95 Transcript Type= NA chr10 12349482 12835545 12349482 12835545 + ENST00000619168.4@CAMK1D ENST00000619168.4 protein_coding 12349482,12553225,12666736,12760948,12769673,12791158,12814195,12816250,12824465,12825573,12828769 12349910,12553356,12666810,12761086,12769799,12791233,12814307,12816328,12824552,12825690,12835545 Gene ID= ENSG00000183049.12 TPM= 4.53 Transcript Type= protein_coding chr10 12896625 13001697 12896625 13001697 - ENST00000378825.4@CCDC3 ENST00000378825.4 protein_coding 13001197,12998338,12896625 13001697,12998512,12898679 Gene ID= ENSG00000151468.10 TPM= 9.06 Transcript Type= protein_coding chr10 13100124 13138316 13100124 13138316 + transcript252.chr10.nic@OPTN transcript252.chr10.nic protein_coding 13100124,13109112,13110180,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745 13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138316 Gene ID= ENSG00000123240.16 TPM= 9.33 Transcript Type= NA chr10 13100048 13138316 13100048 13138316 + transcript257.chr10.nic@OPTN transcript257.chr10.nic protein_coding 13100048,13109112,13110274,13112453,13116267,13118906,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745 13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138316 Gene ID= ENSG00000123240.16 TPM= 43.29 Transcript Type= NA chr10 13100169 13138308 13100169 13138308 + ENST00000378757.6@OPTN ENST00000378757.6 protein_coding 13100169,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745 13100302,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138308 Gene ID= ENSG00000123240.16 TPM= 145.16 Transcript Type= protein_coding chr10 13100173 13138291 13100173 13138291 + ENST00000378748.7@OPTN ENST00000378748.7 protein_coding 13100173,13108138,13108962,13109097,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745 13100302,13108289,13109015,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291 Gene ID= ENSG00000123240.16 TPM= 4.8 Transcript Type= protein_coding chr10 13100225 13138291 13100225 13138291 + ENST00000378747.7@OPTN ENST00000378747.7 protein_coding 13100225,13108138,13109112,13110274,13112453,13116267,13118888,13122385,13123995,13125418,13125946,13127745,13132067,13133502,13136745 13100302,13108289,13109288,13110476,13112635,13116340,13119040,13122487,13124110,13125567,13126039,13127903,13132197,13133581,13138291 Gene ID= ENSG00000123240.16 TPM= 9.33 Transcript Type= protein_coding chr10 13277800 13300130 13277800 13300130 - transcript272.chr10.nic@PHYH transcript272.chr10.nic protein_coding 13299968,13298187,13294428,13291831,13288360,13283690,13280976,13277800 13300130,13298245,13295606,13291912,13288541,13283839,13281110,13278354 Gene ID= ENSG00000107537.13 TPM= 5.28 Transcript Type= NA chr10 13277798 13300130 13277798 13300130 - transcript276.chr10.nnic@PHYH transcript276.chr10.nnic protein_coding 13299968,13298187,13295496,13294428,13283690,13280976,13277798 13300130,13298245,13295606,13294596,13283839,13281110,13278354 Gene ID= ENSG00000107537.13 TPM= 6.18 Transcript Type= NA chr10 13277800 13300101 13277800 13300101 - ENST00000263038.8@PHYH ENST00000263038.8 protein_coding 13299968,13298187,13295496,13294428,13291831,13288360,13283690,13280976,13277800 13300101,13298245,13295606,13294596,13291912,13288541,13283839,13281110,13278354 Gene ID= ENSG00000107537.13 TPM= 139.75 Transcript Type= protein_coding chr10 13317431 13347741 13317431 13347741 - transcript284.chr10.nic@SEPHS1 transcript284.chr10.nic protein_coding 13347277,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317431 13347741,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356 Gene ID= ENSG00000086475.14 TPM= 52.07 Transcript Type= NA chr10 13317424 13348297 13317424 13348297 - ENST00000327347.9@SEPHS1 ENST00000327347.9 protein_coding 13348000,13344758,13338705,13336243,13333817,13329698,13328351,13322835,13317424 13348297,13345028,13338808,13336350,13333971,13329788,13328450,13323047,13319356 Gene ID= ENSG00000086475.14 TPM= 33.05 Transcript Type= protein_coding chr10 13317439 13348298 13317439 13348298 - ENST00000545675.5@SEPHS1 ENST00000545675.5 protein_coding 13348000,13338705,13336243,13333817,13329698,13328351,13322835,13317439 13348298,13338808,13336350,13333971,13329788,13328450,13323047,13319356 Gene ID= ENSG00000086475.14 TPM= 1.36 Transcript Type= protein_coding chr10 13441084 13528984 13441084 13528984 - transcript289.chr10.nic@BEND7 transcript289.chr10.nic protein_coding 13528473,13526138,13499739,13496766,13492611,13480899,13452539,13447266,13441084 13528984,13526221,13500080,13496888,13492876,13481124,13452658,13447316,13441750 Gene ID= ENSG00000165626.16 TPM= 4.53 Transcript Type= NA chr10 13586926 13618615 13586926 13618615 + transcript297.chr10.nic@PRPF18 transcript297.chr10.nic protein_coding 13586926,13597458,13600244,13605631,13610039,13611615,13613741,13614015,13616398 13587152,13597535,13600348,13605744,13610185,13611683,13613881,13614086,13618615 Gene ID= ENSG00000165630.13 TPM= 1.81 Transcript Type= NA chr10 13586926 13630874 13586926 13630874 + transcript298.chr10.nnic@PRPF18 transcript298.chr10.nnic protein_coding 13586926,13597458,13600244,13605631,13610039,13611615,13614015,13616398,13630260 13587152,13597535,13600348,13605744,13610185,13611683,13614086,13616553,13630874 Gene ID= ENSG00000165630.13 TPM= 1.81 Transcript Type= NA chr10 13586927 13630868 13586927 13630868 + ENST00000378572.7@PRPF18 ENST00000378572.7 protein_coding 13586927,13597458,13600244,13605631,13610039,13611615,13613741,13614015,13616398,13630260 13587152,13597535,13600348,13605744,13610185,13611683,13613881,13614086,13616553,13630868 Gene ID= ENSG00000165630.13 TPM= 20.83 Transcript Type= protein_coding chr10 13693702 13891827 13693702 13891827 - transcript299.chr10.nnic@FRMD4A transcript299.chr10.nnic protein_coding 13891624,13858847,13810814,13796496,13782922,13762624,13761647,13747736,13740512,13740194,13737844,13707037,13701340,13693702 13891827,13858912,13810908,13796588,13783006,13762680,13761669,13747819,13740577,13740251,13737930,13707113,13701478,13694039 Gene ID= ENSG00000151474.21 TPM= 1.81 Transcript Type= NA chr10 14519159 14604389 14519159 14604389 - ENST00000468747.5@FAM107B ENST00000468747.5 protein_coding 14604240,14530332,14521869,14519159 14604389,14530515,14522019,14521306 Gene ID= ENSG00000065809.13 TPM= 8.15 Transcript Type= protein_coding chr10 14519513 14604418 14519513 14604418 - ENST00000378467.8@FAM107B ENST00000378467.8 protein_coding 14604240,14553322,14530332,14521869,14519513 14604418,14553387,14530515,14522019,14521306 Gene ID= ENSG00000065809.13 TPM= 1.81 Transcript Type= protein_coding chr10 14838304 14871748 14838304 14871748 + transcript317.chr10.nnic@HSPA14 transcript317.chr10.nnic protein_coding 14838304,14839905,14840075,14848609,14848790,14849721,14852370,14854125,14855841,14867083,14867736,14870597,14871528 14838459,14839985,14840157,14848657,14848895,14849811,14852531,14854280,14855943,14867295,14867909,14870667,14871748 Gene ID= ENSG00000187522.14 TPM= 2.72 Transcript Type= NA chr10 14898231 14954096 14898231 14954096 - transcript327.chr10.nnic@DCLRE1C transcript327.chr10.nnic protein_coding 14953902,14949036,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14908705,14898231 14954096,14949087,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330,14899312 Gene ID= ENSG00000152457.17 TPM= 2.72 Transcript Type= NA chr10 14907878 14954094 14907878 14954094 - transcript334.chr10.nic@DCLRE1C transcript334.chr10.nic protein_coding 14953902,14945105,14939810,14936538,14935463,14934703,14934380,14932854,14928016,14926843,14922981,14919738,14907878 14954094,14945189,14939869,14936593,14935564,14934775,14934520,14932955,14928152,14926897,14923069,14919832,14909330 Gene ID= ENSG00000152457.17 TPM= 1.81 Transcript Type= NA chr10 15097180 15104254 15097180 15104254 + ENST00000616640.1@RPP38 ENST00000616640.1 protein_coding 15097180,15103305 15097766,15104254 Gene ID= ENSG00000152464.14 TPM= 1.81 Transcript Type= protein_coding chr10 15097331 15104255 15097331 15104255 + ENST00000378202.5@RPP38 ENST00000378202.5 protein_coding 15097331,15103305 15097409,15104255 Gene ID= ENSG00000152464.14 TPM= 5.43 Transcript Type= protein_coding chr10 15097382 15104257 15097382 15104257 + ENST00000378197.4@RPP38 ENST00000378197.4 protein_coding 15097382,15102218,15103305 15097766,15102336,15104257 Gene ID= ENSG00000152464.14 TPM= 1.81 Transcript Type= protein_coding chr10 15107866 15168693 15107866 15168693 - ENST00000378165.8@NMT2 ENST00000378165.8 protein_coding 15168503,15141422,15135274,15133245,15133053,15132817,15130142,15128350,15119343,15112796,15109702,15107866 15168693,15141557,15135418,15133363,15133144,15132933,15130312,15128458,15119513,15112963,15109839,15109215 Gene ID= ENSG00000152465.17 TPM= 9.06 Transcript Type= protein_coding chr10 15211643 15371059 15211643 15371059 - ENST00000378116.8@FAM171A1 ENST00000378116.8 protein_coding 15370956,15283878,15275855,15254721,15248639,15220944,15215996,15211643 15371059,15284105,15275947,15254879,15248815,15221060,15216110,15214601 Gene ID= ENSG00000148468.16 TPM= 4.53 Transcript Type= protein_coding chr10 15513949 15720125 15513949 15720125 - ENST00000378076.3@ITGA8 ENST00000378076.3 protein_coding 15719563,15718766,15687938,15684004,15678722,15677592,15672624,15671603,15660879,15658999,15655354,15646846,15644030,15616514,15613660,15608235,15607677,15606285,15605724,15604208,15597207,15592225,15586584,15575489,15572211,15558074,15548455,15531050,15519290,15513949 15720125,15718899,15688038,15684127,15678783,15677637,15672749,15671647,15660922,15659055,15655406,15647051,15644221,15616559,15613767,15608290,15607831,15606422,15605791,15604355,15597299,15592304,15586664,15575594,15572369,15558202,15548568,15531151,15519412,15517244 Gene ID= ENSG00000077943.7 TPM= 9.96 Transcript Type= protein_coding chr10 15778170 15860520 15778170 15860520 - ENST00000277632.7@MINDY3 ENST00000277632.7 protein_coding 15860206,15847864,15843212,15841426,15838228,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170 15860520,15847943,15843272,15841599,15838279,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141 Gene ID= ENSG00000148481.13 TPM= 26.26 Transcript Type= protein_coding chr10 15778170 15860524 15778170 15860524 - transcript362.chr10.nnic@MINDY3 transcript362.chr10.nnic protein_coding 15860206,15847864,15843212,15841426,15837204,15834543,15833630,15796100,15789247,15786561,15782155,15778170 15860524,15847943,15843272,15841599,15837318,15834616,15833709,15796172,15789319,15786648,15782226,15779141 Gene ID= ENSG00000148481.13 TPM= 1.81 Transcript Type= NA chr10 15788569 15860524 15788569 15860524 - transcript363.chr10.nic@MINDY3 transcript363.chr10.nic protein_coding 15860206,15847864,15843212,15841426,15837204,15834543,15833630,15821656,15816835,15796100,15788569 15860524,15847943,15843272,15841599,15837318,15834616,15833709,15821726,15816915,15796172,15789319 Gene ID= ENSG00000148481.13 TPM= 1.81 Transcript Type= NA chr10 15778170 15860498 15778170 15860498 - ENST00000477891.1@MINDY3 ENST00000477891.1 protein_coding 15860206,15847864,15843212,15841426,15837204,15834543,15833630,15821656,15816835,15796100,15789247,15786561,15782155,15778170 15860498,15847943,15843272,15841599,15837318,15834616,15833709,15821726,15816915,15796172,15789319,15786648,15782226,15779141 Gene ID= ENSG00000148481.13 TPM= 4.53 Transcript Type= processed_transcript chr10 16436940 16513453 16436940 16513453 + transcript365.chr10.nnic@PTER transcript365.chr10.nnic protein_coding 16436940,16437357,16467132,16484337,16486352,16505020,16511046 16437047,16437490,16467210,16484816,16486617,16505160,16513453 Gene ID= ENSG00000165983.14 TPM= 1.81 Transcript Type= NA chr10 16436940 16513741 16436940 16513741 + transcript369.chr10.nnic@PTER transcript369.chr10.nnic protein_coding 16436940,16437357,16484337,16486352,16505020,16511046 16437047,16437745,16484816,16486617,16505160,16513741 Gene ID= ENSG00000165983.14 TPM= 1.81 Transcript Type= NA chr10 16436948 16513453 16436948 16513453 + transcript370.chr10.nnic@PTER transcript370.chr10.nnic protein_coding 16436948,16467132,16484337,16486352,16505020,16511046 16437047,16467210,16484816,16486617,16505160,16513453 Gene ID= ENSG00000165983.14 TPM= 3.62 Transcript Type= NA chr10 16436940 16513657 16436940 16513657 + transcript371.chr10.nnic@PTER transcript371.chr10.nnic protein_coding 16436940,16437357,16486352,16505020,16511046 16437047,16437490,16486617,16505160,16513657 Gene ID= ENSG00000165983.14 TPM= 2.72 Transcript Type= NA chr10 16436943 16513745 16436943 16513745 + ENST00000423462.6@PTER ENST00000423462.6 protein_coding 16436943,16486352,16505020,16511046 16437047,16486617,16505160,16513745 Gene ID= ENSG00000165983.14 TPM= 1.81 Transcript Type= protein_coding chr10 16436984 16513737 16436984 16513737 + ENST00000378000.5@PTER ENST00000378000.5 protein_coding 16436984,16437357,16484337,16486352,16505020,16511046 16437047,16437490,16484816,16486617,16505160,16513737 Gene ID= ENSG00000165983.14 TPM= 12.68 Transcript Type= protein_coding chr10 16590611 16817528 16590611 16817528 - ENST00000345264.9@RSU1 ENST00000345264.9 protein_coding 16817315,16816973,16782034,16764390,16754871,16752918,16752539,16695023,16590611 16817528,16817084,16782084,16764510,16754989,16753000,16752653,16695155,16593496 Gene ID= ENSG00000148484.17 TPM= 57.95 Transcript Type= protein_coding chr10 16590611 16817383 16590611 16817383 - ENST00000377921.7@RSU1 ENST00000377921.7 protein_coding 16816973,16782034,16764390,16754871,16752918,16752539,16695023,16590611 16817383,16782084,16764510,16754989,16753000,16752653,16695155,16593496 Gene ID= ENSG00000148484.17 TPM= 5.43 Transcript Type= protein_coding chr10 17146737 17201682 17146737 17201682 - ENST00000377799.7@TRDMT1 ENST00000377799.7 protein_coding 17201571,17174551,17168841,17162166,17161483,17160305,17159146,17157441,17154677,17153507,17146737 17201682,17174660,17168917,17162237,17161548,17160374,17159229,17157784,17154734,17153636,17149140 Gene ID= ENSG00000107614.21 TPM= 1.81 Transcript Type= protein_coding chr10 17228535 17237594 17228535 17237594 + transcript388.chr10.nic@VIM transcript388.chr10.nic protein_coding 17228535,17229276,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230 17228676,17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237594 Gene ID= ENSG00000026025.15 TPM= 277.7 Transcript Type= NA chr10 17229278 17237593 17229278 17237593 + ENST00000224237.9@VIM ENST00000224237.9 protein_coding 17229278,17230650,17233587,17233770,17234693,17235169,17235846,17236294,17237230 17229985,17230710,17233682,17233931,17234818,17235389,17235889,17236379,17237593 Gene ID= ENSG00000026025.15 TPM= 269.55 Transcript Type= protein_coding chr10 17644115 17715913 17644115 17715913 + transcript404.chr10.nnic@STAM transcript404.chr10.nnic protein_coding 17644115,17660464,17688027,17693222,17695049,17696775,17700191,17704431,17704970,17705588,17708776,17714543 17644379,17660548,17688173,17693312,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715913 Gene ID= ENSG00000136738.14 TPM= 2.72 Transcript Type= NA chr10 17644125 17715914 17644125 17715914 + ENST00000377524.7@STAM ENST00000377524.7 protein_coding 17644125,17660464,17684675,17684832,17688027,17693222,17695049,17696775,17700191,17704431,17704970,17705588,17708776,17714543 17644379,17660548,17684750,17684927,17688173,17693312,17695241,17696869,17700279,17704518,17705024,17705741,17708951,17715914 Gene ID= ENSG00000136738.14 TPM= 42.56 Transcript Type= protein_coding chr10 17809344 17911170 17809344 17911170 + ENST00000569591.2@MRC1 ENST00000569591.2 protein_coding 17809344,17823074,17827542,17833675,17840693,17845289,17849579,17852967,17856242,17861387,17863534,17866562,17870246,17870848,17871982,17873784,17875090,17877900,17879721,17880525,17881067,17885269,17894210,17898034,17900788,17901973,17906886,17907534,17909306,17910215 17809526,17823475,17827715,17833839,17840806,17845435,17849764,17853124,17856352,17861502,17863682,17866761,17870373,17870935,17872126,17873825,17875253,17877967,17879821,17880670,17881181,17885435,17894312,17898266,17900953,17902122,17906999,17907698,17909347,17911170 Gene ID= ENSG00000260314.2 TPM= 52.52 Transcript Type= protein_coding chr10 18545561 18651622 18545561 18651622 - ENST00000377304.6@NSUN6 ENST00000377304.6 protein_coding 18651129,18648490,18642476,18616184,18614460,18609845,18596208,18585949,18551823,18548112,18545561 18651622,18648645,18642555,18616293,18614613,18609926,18596327,18586093,18551971,18548237,18546145 Gene ID= ENSG00000241058.3 TPM= 5.43 Transcript Type= protein_coding chr10 18659405 18681639 18659405 18681639 + ENST00000377275.3@ARL5B ENST00000377275.3 protein_coding 18659405,18666575,18668530,18672622,18673984,18675168 18659683,18666635,18668677,18672705,18674135,18681639 Gene ID= ENSG00000165997.4 TPM= 4.53 Transcript Type= protein_coding chr10 19816149 20283610 19816149 20283610 + transcript417.chr10.nnic@PLXDC2 transcript417.chr10.nnic protein_coding 19816149,20001775,20046867,20068170,20143295,20147784,20164468,20176999,20177328,20211669,20217423,20219064,20245345,20279703 19817191,20001986,20047015,20068239,20143417,20147902,20164567,20177094,20177409,20211729,20217576,20219102,20245505,20283610 Gene ID= ENSG00000120594.16 TPM= 94.18 Transcript Type= NA chr10 20780632 21293072 20780632 21293072 - transcript427.chr10.nnic@NEBL transcript427.chr10.nnic protein_coding 21292830,21172383,21020117,20961672,20812769,20787202,20780632 21293072,21172477,21020201,20961779,20812940,20787308,20785923 Gene ID= ENSG00000078114.18 TPM= 3.62 Transcript Type= NA chr10 21492658 21497262 21492658 21497262 - ENST00000377113.5@CASC10 ENST00000377113.5 protein_coding 21496750,21492658 21497262,21495945 Gene ID= ENSG00000204682.5 TPM= 6.34 Transcript Type= protein_coding chr10 21756537 22003725 21756537 22003725 - ENST00000376980.7@DNAJC1 ENST00000376980.7 protein_coding 22003213,21929040,21928506,21920798,21919832,21918779,21904522,21882282,21805980,21766261,21759170,21756537 22003725,21929141,21928552,21920963,21919929,21918872,21904612,21882439,21806099,21766309,21759618,21756755 Gene ID= ENSG00000136770.10 TPM= 47.09 Transcript Type= protein_coding chr10 22315974 22320308 22315974 22320308 + ENST00000376836.7@COMMD3 ENST00000376836.7 protein_coding 22315974,22317884,22318105,22318272,22318653,22318806,22318959,22319939 22316556,22317995,22318168,22318306,22318713,22318862,22319018,22320308 Gene ID= ENSG00000148444.15 TPM= 37.43 Transcript Type= protein_coding chr10 22316383 22320307 22316383 22320307 + transcript439.chr10.nic@COMMD3 transcript439.chr10.nic protein_coding 22316383,22317884,22318105,22318272,22318806,22318959,22319939 22316556,22317995,22318168,22318713,22318862,22319018,22320307 Gene ID= ENSG00000148444.15 TPM= 2.11 Transcript Type= NA chr10 22316441 22320306 22316441 22320306 + ENST00000463688.6@COMMD3 ENST00000463688.6 protein_coding 22316441,22317884,22318105,22318272,22319939 22316556,22317995,22318168,22319018,22320306 Gene ID= ENSG00000148444.15 TPM= 1.2 Transcript Type= retained_intron chr10 22321112 22331624 22321112 22331624 + transcript444.chr10.nnic@BMI1 transcript444.chr10.nnic protein_coding 22321112,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213,22329434 22321696,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22329351,22331624 Gene ID= ENSG00000168283.13 TPM= 1.81 Transcript Type= NA chr10 22321897 22331500 22321897 22331500 + transcript448.chr10.nic@BMI1 transcript448.chr10.nic protein_coding 22321897,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213 22322170,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331500 Gene ID= ENSG00000168283.13 TPM= 7.24 Transcript Type= NA chr10 22325634 22331500 22325634 22331500 + transcript450.chr10.nic@BMI1 transcript450.chr10.nic protein_coding 22325634,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213 22325722,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331500 Gene ID= ENSG00000168283.13 TPM= 2.72 Transcript Type= NA chr10 22321211 22331484 22321211 22331484 + ENST00000376663.7@BMI1 ENST00000376663.7 protein_coding 22321211,22326431,22326890,22327595,22327742,22327950,22328134,22328600,22329048,22329213 22321696,22326561,22326986,22327650,22327792,22328058,22328179,22328698,22329128,22331484 Gene ID= ENSG00000168283.13 TPM= 36.22 Transcript Type= protein_coding chr10 22534849 22714555 22534849 22714555 - ENST00000376573.8@PIP4K2A ENST00000376573.8 protein_coding 22714183,22609620,22607927,22591629,22573311,22567851,22550659,22541804,22539971,22534849 22714555,22609717,22608023,22591781,22573457,22567889,22550772,22542047,22540074,22537281 Gene ID= ENSG00000150867.13 TPM= 74.25 Transcript Type= protein_coding chr10 23095506 23122013 23095506 23122013 + ENST00000376510.7@MSRB2 ENST00000376510.7 protein_coding 23095506,23104144,23110242,23119304,23120758 23095726,23104244,23110318,23119451,23122013 Gene ID= ENSG00000148450.12 TPM= 73.35 Transcript Type= protein_coding chr10 24583616 24722996 24583616 24722996 - transcript467.chr10.nic@ARHGAP21 transcript467.chr10.nic protein_coding 24722486,24721837,24670218,24666985,24635011,24633402,24629996,24622733,24619473,24607745,24607499,24604312,24601978,24600646,24597945,24597447,24596740,24595888,24595717,24595117,24594950,24591887,24591642,24591225,24589271,24583616 24722996,24722279,24670397,24667009,24635103,24633480,24630050,24622762,24621369,24607903,24607601,24604348,24602103,24600930,24598009,24597583,24596882,24596043,24595795,24595190,24595039,24592012,24591683,24591330,24589302,24586106 Gene ID= ENSG00000107863.17 TPM= 3.62 Transcript Type= NA chr10 24583616 24723549 24583616 24723549 - transcript468.chr10.nic@ARHGAP21 transcript468.chr10.nic protein_coding 24723157,24721837,24670218,24666985,24635011,24633402,24629996,24622733,24619473,24607745,24607499,24604312,24601978,24600646,24597945,24597447,24596740,24595888,24595717,24595117,24594950,24591887,24591642,24591225,24589271,24583616 24723549,24722279,24670397,24667009,24635103,24633480,24630050,24622762,24621369,24607903,24607601,24604348,24602103,24600930,24598009,24597583,24596882,24596043,24595795,24595190,24595039,24592012,24591683,24591330,24589302,24586106 Gene ID= ENSG00000107863.17 TPM= 1.81 Transcript Type= NA chr10 24629525 24724638 24629525 24724638 - transcript471.chr10.nic@ARHGAP21 transcript471.chr10.nic protein_coding 24723562,24721837,24670218,24666985,24635011,24633402,24629996,24629525 24724638,24722279,24670397,24667009,24635103,24633480,24630050,24629862 Gene ID= ENSG00000107863.17 TPM= 1.81 Transcript Type= NA chr10 24583609 24723668 24583609 24723668 - ENST00000396432.6@ARHGAP21 ENST00000396432.6 protein_coding 24723562,24721837,24670218,24666985,24635011,24633402,24629996,24622733,24619473,24607745,24607499,24604312,24601978,24600646,24597945,24597447,24596740,24595888,24595717,24595117,24594950,24591887,24591642,24591225,24589271,24583609 24723668,24722279,24670397,24667009,24635103,24633480,24630050,24622762,24621369,24607903,24607601,24604348,24602103,24600930,24598009,24597583,24596882,24596043,24595795,24595190,24595039,24592012,24591683,24591330,24589302,24586106 Gene ID= ENSG00000107863.17 TPM= 5.43 Transcript Type= protein_coding chr10 24848614 24952581 24848614 24952581 - transcript478.chr10.nnic@PRTFDC1 transcript478.chr10.nnic protein_coding 24952528,24951551,24942330,24937184,24871998,24856913,24855318,24851388,24848614 24952581,24951607,24942436,24937367,24872063,24858409,24855364,24851464,24849891 Gene ID= ENSG00000099256.18 TPM= 1.81 Transcript Type= NA chr10 24848614 24952587 24848614 24952587 - transcript481.chr10.nic@PRTFDC1 transcript481.chr10.nic protein_coding 24952528,24942330,24937184,24871998,24856913,24855318,24851388,24848614 24952587,24942436,24937367,24872063,24858409,24855364,24851464,24849891 Gene ID= ENSG00000099256.18 TPM= 1.81 Transcript Type= NA chr10 24848607 24952604 24848607 24952604 - ENST00000320152.10@PRTFDC1 ENST00000320152.10 protein_coding 24952528,24942330,24937184,24871998,24858392,24856913,24855318,24851388,24848607 24952604,24942436,24937367,24872063,24858409,24856995,24855364,24851464,24849891 Gene ID= ENSG00000099256.18 TPM= 19.02 Transcript Type= protein_coding chr10 25016658 25026664 25016658 25026664 + ENST00000376356.4@THNSL1 ENST00000376356.4 protein_coding 25016658,25021742,25023176 25016692,25021908,25026664 Gene ID= ENSG00000185875.12 TPM= 19.02 Transcript Type= protein_coding chr10 25016658 25026664 25016658 25026664 + ENST00000524413.5@THNSL1 ENST00000524413.5 protein_coding 25016658,25021742,25023176 25016789,25021908,25026664 Gene ID= ENSG00000185875.12 TPM= 9.96 Transcript Type= protein_coding chr10 26438203 26567803 26438203 26567803 + ENST00000376236.8@APBB1IP ENST00000376236.8 protein_coding 26438203,26438652,26492327,26496304,26500819,26503197,26511747,26513539,26533439,26536074,26541582,26560105,26560730,26562326,26566961 26438455,26438853,26492398,26496391,26501111,26503274,26511906,26513660,26533525,26536217,26541692,26560203,26560844,26562429,26567803 Gene ID= ENSG00000077420.15 TPM= 1.81 Transcript Type= protein_coding chr10 26746596 26861087 26746596 26861087 - ENST00000536334.5@ABI1 ENST00000536334.5 protein_coding 26860747,26823138,26777065,26771075,26770245,26768852,26765218,26751598,26746596 26861087,26823305,26777241,26771089,26770345,26768992,26765318,26751783,26748745 Gene ID= ENSG00000136754.17 TPM= 3.62 Transcript Type= protein_coding chr10 27110454 27154392 27110454 27154392 - ENST00000376016.7@YME1L1 ENST00000376016.7 protein_coding 27154178,27148906,27145428,27142387,27136276,27134831,27134039,27131859,27126696,27123547,27122841,27121386,27120435,27119294,27117576,27116219,27116060,27114521,27110454 27154392,27149040,27145590,27142485,27136385,27134981,27134122,27131941,27126786,27123699,27122973,27121448,27120547,27119449,27117727,27116345,27116133,27114607,27112120 Gene ID= ENSG00000136758.18 TPM= 71.38 Transcript Type= protein_coding chr10 27195215 27240821 27195215 27240821 - transcript518.chr10.nic@ACBD5 transcript518.chr10.nic protein_coding 27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195215 27240821,27240474,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 9.41 Transcript Type= NA chr10 27195215 27242185 27195215 27242185 - transcript519.chr10.nnic@ACBD5 transcript519.chr10.nnic protein_coding 27242059,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195215 27242185,27240474,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 7.6 Transcript Type= NA chr10 27195217 27242130 27195217 27242130 - ENST00000375905.8@ACBD5 ENST00000375905.8 protein_coding 27242059,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217 27242130,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 11.6 Transcript Type= protein_coding chr10 27195215 27240879 27195215 27240879 - ENST00000375897.7@ACBD5 ENST00000375897.7 protein_coding 27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195215 27240879,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 16.81 Transcript Type= protein_coding chr10 27195215 27240829 27195215 27240829 - transcript528.chr10.nnic@ACBD5 transcript528.chr10.nnic protein_coding 27240674,27240319,27235092,27231748,27223338,27219723,27215535,27210814,27208246,27205198,27204440,27195215 27240829,27240484,27235212,27231820,27223452,27219857,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 4.87 Transcript Type= NA chr10 27195215 27242111 27195215 27242111 - transcript529.chr10.nnic@ACBD5 transcript529.chr10.nnic protein_coding 27242059,27240319,27235092,27231748,27223338,27219723,27215535,27210814,27208246,27205198,27204440,27195215 27242111,27240484,27235212,27231820,27223452,27219857,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 2.16 Transcript Type= NA chr10 27195214 27240815 27195214 27240815 - ENST00000396271.7@ACBD5 ENST00000396271.7 protein_coding 27240674,27240319,27235092,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195214 27240815,27240484,27235212,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 34.01 Transcript Type= protein_coding chr10 27195217 27242088 27195217 27242088 - ENST00000375901.5@ACBD5 ENST00000375901.5 protein_coding 27242059,27240319,27231748,27223338,27219723,27217980,27215535,27210814,27208246,27205198,27204440,27195217 27242088,27240484,27231820,27223452,27219857,27218183,27215641,27211081,27208445,27205248,27204549,27197442 Gene ID= ENSG00000107897.18 TPM= 2.3 Transcript Type= protein_coding chr10 27812165 27999019 27812165 27999019 - transcript541.chr10.nnic@ARMC4 transcript541.chr10.nnic protein_coding 27998803,27994919,27987386,27985019,27984184,27983843,27981466,27971108,27968923,27961568,27944816,27944222,27940563,27939897,27936726,27935010,27907663,27862434,27860625,27812165 27999019,27995180,27987543,27985211,27984290,27983979,27981582,27971313,27969018,27961715,27944962,27944431,27940805,27940007,27936880,27935252,27907777,27862622,27860846,27812625 Gene ID= ENSG00000169126.15 TPM= 3.62 Transcript Type= NA chr10 28051057 28303073 28051057 28303073 - transcript546.chr10.nnic@MPP7 transcript546.chr10.nnic protein_coding 28302861,28238568,28202153,28149982,28147483,28131560,28125010,28124031,28120594,28120194,28119651,28089671,28069772,28059650,28058495,28056480,28051057 28303073,28238735,28202271,28150059,28147563,28131691,28125091,28124116,28120668,28120390,28119715,28089841,28069852,28059743,28058603,28056623,28054244 Gene ID= ENSG00000150054.18 TPM= 8.15 Transcript Type= NA chr10 28522652 28532743 28522652 28532743 - ENST00000527986.5@WAC-AS1 ENST00000527986.5 antisense_RNA 28532442,28525948,28522652 28532743,28526008,28524611 Gene ID= ENSG00000254635.5 TPM= 5.43 Transcript Type= antisense_RNA chr10 28533118 28620992 28533118 28620992 + transcript549.chr10.nnic@WAC transcript549.chr10.nnic protein_coding 28533118,28533494,28533998,28535544,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537 28533145,28533620,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28620992 Gene ID= ENSG00000095787.21 TPM= 4.43 Transcript Type= NA chr10 28532589 28620992 28532589 28620992 + transcript554.chr10.nnic@WAC transcript554.chr10.nnic protein_coding 28532589,28533998,28535544,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537 28533007,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28620992 Gene ID= ENSG00000095787.21 TPM= 5.49 Transcript Type= NA chr10 28533118 28620992 28533118 28620992 + transcript557.chr10.nnic@WAC transcript557.chr10.nnic protein_coding 28533118,28533998,28535544,28583399,28589736,28590720,28595733,28608186,28610699,28611774,28614567,28616173,28617657,28619537 28533620,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28610821,28611922,28614685,28616362,28617784,28620992 Gene ID= ENSG00000095787.21 TPM= 10.77 Transcript Type= NA chr10 28533118 28620992 28533118 28620992 + transcript563.chr10.nic@WAC transcript563.chr10.nic protein_coding 28533118,28533998,28535562,28583399,28589736,28590720,28595733,28608186,28610699,28614567,28616173,28617657,28619537 28533620,28534034,28535757,28583505,28589851,28590832,28596041,28608431,28611922,28614685,28616362,28617784,28620992 Gene ID= ENSG00000095787.21 TPM= 1.94 Transcript Type= NA chr10 28677342 28682939 28677342 28682939 + ENST00000375533.5@BAMBI ENST00000375533.5 protein_coding 28677342,28681258,28681983 28677973,28681545,28682939 Gene ID= ENSG00000095739.10 TPM= 258.99 Transcript Type= protein_coding chr10 29409534 29461146 29409534 29461146 + transcript587.chr10.nnic@SVIL-AS1 transcript587.chr10.nnic antisense_RNA 29409534,29415357,29458274,29460872 29409658,29415412,29458839,29461146 Gene ID= ENSG00000224597.9 TPM= 1.81 Transcript Type= NA chr10 29409534 29427649 29409534 29427649 + transcript589.chr10.nnic@SVIL-AS1 transcript589.chr10.nnic antisense_RNA 29409534,29415357,29420491,29423798 29409683,29415412,29423222,29427649 Gene ID= ENSG00000224597.9 TPM= 13.58 Transcript Type= NA chr10 29409534 29469128 29409534 29469128 + transcript593.chr10.nic@SVIL-AS1 transcript593.chr10.nic antisense_RNA 29409534,29415357,29467240 29409658,29415412,29469128 Gene ID= ENSG00000224597.9 TPM= 1.81 Transcript Type= NA chr10 29409558 29483918 29409558 29483918 + ENST00000414457.5@SVIL-AS1 ENST00000414457.5 antisense_RNA 29409558,29415357,29482833 29409658,29415412,29483918 Gene ID= ENSG00000224597.9 TPM= 2.72 Transcript Type= antisense_RNA chr10 29409572 29422372 29409572 29422372 + ENST00000427063.6@SVIL-AS1 ENST00000427063.6 antisense_RNA 29409572,29415357,29420491 29409658,29415412,29422372 Gene ID= ENSG00000224597.9 TPM= 17.21 Transcript Type= antisense_RNA chr10 29457340 29737042 29457340 29737042 - transcript576.chr10.nic@SVIL transcript576.chr10.nic protein_coding 29736685,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29531254,29530607,29529705,29524472,29523451,29522410,29512735,29499116,29495092,29494914,29493214,29490847,29488601,29487163,29486410,29486085,29484656,29481584,29480537,29473838,29471138,29470276,29467742,29465595,29463492,29462277,29458434,29457340 29737042,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29531288,29530668,29529844,29524715,29524027,29522635,29512861,29499263,29495181,29495000,29493391,29491019,29488756,29487299,29486557,29486230,29484831,29481728,29480813,29473989,29471243,29470483,29467875,29465750,29463635,29462401,29458589,29458333 Gene ID= ENSG00000197321.14 TPM= 2.72 Transcript Type= NA chr10 29457340 29522740 29457340 29522740 - transcript580.chr10.nic@SVIL transcript580.chr10.nic protein_coding 29522410,29512735,29499116,29495092,29494914,29493214,29490847,29488601,29487163,29486410,29486085,29484656,29481584,29480537,29473838,29471138,29470276,29467742,29465595,29463492,29462277,29458434,29457340 29522740,29512861,29499263,29495181,29495000,29493391,29491019,29488756,29487299,29486557,29486230,29484831,29481728,29480813,29473989,29471243,29470483,29467875,29465750,29463635,29462401,29458589,29458333 Gene ID= ENSG00000197321.14 TPM= 3.17 Transcript Type= NA chr10 29457338 29735804 29457338 29735804 - ENST00000375400.7@SVIL ENST00000375400.7 protein_coding 29735751,29686553,29657969,29569255,29563201,29555051,29554783,29550597,29531254,29530607,29529705,29524472,29523451,29522410,29512735,29499116,29495092,29494914,29493214,29490847,29488601,29487163,29486410,29486085,29484656,29481584,29480537,29473838,29471138,29470276,29467742,29465595,29463492,29462277,29458434,29457338 29735804,29686651,29658068,29569312,29563292,29555108,29554934,29551263,29531288,29530668,29529844,29524715,29524027,29522635,29512861,29499263,29495181,29495000,29493391,29491019,29488756,29487299,29486557,29486230,29484831,29481728,29480813,29473989,29471243,29470483,29467875,29465750,29463635,29462401,29458589,29458333 Gene ID= ENSG00000197321.14 TPM= 4.98 Transcript Type= protein_coding chr10 30012800 30059524 30012800 30059524 - ENST00000375377.1@JCAD ENST00000375377.1 protein_coding 30059482,30047532,30026103,30012800 30059524,30047871,30029866,30017917 Gene ID= ENSG00000165757.8 TPM= 6.34 Transcript Type= protein_coding chr10 30309801 30349319 30309801 30349319 - ENST00000263063.8@MTPAP ENST00000263063.8 protein_coding 30349119,30341468,30340226,30336803,30326424,30322391,30316118,30315963,30309801 30349319,30341640,30340450,30337027,30326635,30322617,30316210,30316036,30313971 Gene ID= ENSG00000107951.14 TPM= 52.52 Transcript Type= protein_coding chr10 30433980 30461832 30433980 30461832 + transcript603.chr10.nnic@MAP3K8 transcript603.chr10.nnic protein_coding 30433980,30437176,30438916,30447782,30450258,30451638,30458084,30459255,30460706 30434748,30437406,30439274,30447949,30450519,30451744,30458236,30459501,30461832 Gene ID= ENSG00000107968.9 TPM= 3.62 Transcript Type= NA chr10 30433937 30461832 30433937 30461832 + ENST00000263056.5@MAP3K8 ENST00000263056.5 protein_coding 30433937,30437176,30438916,30447782,30450258,30451638,30458084,30459255,30460706 30434378,30437406,30439274,30447949,30450519,30451744,30458236,30459501,30461832 Gene ID= ENSG00000107968.9 TPM= 6.34 Transcript Type= protein_coding chr10 30434636 30461832 30434636 30461832 + transcript605.chr10.nic@MAP3K8 transcript605.chr10.nic protein_coding 30434636,30438916,30447782,30450258,30451638,30458084,30459255,30460706 30434748,30439274,30447949,30450519,30451744,30458236,30459501,30461832 Gene ID= ENSG00000107968.9 TPM= 1.81 Transcript Type= NA chr10 30844638 31031937 30844638 31031937 - ENST00000436087.6@ZNF438 ENST00000436087.6 protein_coding 31031833,30984369,30941575,30908933,30876998,30848531,30844638 31031937,30984426,30941651,30909015,30877065,30850367,30845573 Gene ID= ENSG00000183621.15 TPM= 3.17 Transcript Type= protein_coding chr10 30844638 31031937 30844638 31031937 - ENST00000413025.5@ZNF438 ENST00000413025.5 protein_coding 31031833,30941575,30908933,30876998,30848531,30844638 31031937,30941651,30909015,30877065,30850367,30845573 Gene ID= ENSG00000183621.15 TPM= 4.07 Transcript Type= protein_coding chr10 31319125 31529202 31319125 31529202 + ENST00000320985.14@ZEB1 ENST00000320985.14 protein_coding 31319125,31461037,31495779,31502348,31510673,31514603,31520126,31523933,31526672 31319292,31461237,31495838,31502509,31510875,31514708,31521936,31524113,31529202 Gene ID= ENSG00000148516.21 TPM= 8.15 Transcript Type= protein_coding chr10 31805404 31928876 31805404 31928876 - ENST00000375245.8@ARHGAP12 ENST00000375245.8 protein_coding 31928683,31910525,31908172,31861395,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805404 31928876,31910563,31908926,31861658,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832 Gene ID= ENSG00000165322.17 TPM= 7.24 Transcript Type= protein_coding chr10 31805404 31928876 31805404 31928876 - ENST00000396144.8@ARHGAP12 ENST00000396144.8 protein_coding 31928683,31910525,31908172,31861395,31854066,31852517,31843461,31839637,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805404 31928876,31910563,31908926,31861658,31854206,31852597,31843586,31839711,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832 Gene ID= ENSG00000165322.17 TPM= 5.43 Transcript Type= protein_coding chr10 31805437 31928814 31805437 31928814 - ENST00000375250.9@ARHGAP12 ENST00000375250.9 protein_coding 31928683,31910525,31908172,31861395,31854066,31852517,31843461,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31805437 31928814,31910563,31908926,31861658,31854206,31852597,31843586,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832 Gene ID= ENSG00000165322.17 TPM= 12.68 Transcript Type= protein_coding chr10 31806306 31928807 31806306 31928807 - ENST00000344936.6@ARHGAP12 ENST00000344936.6 protein_coding 31928683,31910525,31908172,31861395,31854066,31852517,31843461,31839637,31839305,31831739,31826304,31820387,31817788,31814259,31812707,31810649,31809230,31808994,31808649,31806306 31928807,31910563,31908926,31861658,31854206,31852597,31843586,31839711,31839319,31831800,31826385,31820488,31817886,31814361,31812823,31810747,31809307,31809128,31808751,31807832 Gene ID= ENSG00000165322.17 TPM= 8.15 Transcript Type= protein_coding chr10 32009010 32056431 32009010 32056431 - ENST00000302418.4@KIF5B ENST00000302418.4 protein_coding 32055848,32048464,32040384,32039327,32038778,32038163,32037520,32037254,32035890,32035522,32034690,32033845,32032706,32031073,32028428,32022848,32022140,32021226,32021022,32019858,32018502,32018316,32018052,32017143,32015509,32009010 32056431,32048551,32040457,32039431,32038826,32038218,32037607,32037378,32035994,32035667,32034838,32034038,32032774,32031279,32028571,32023036,32022257,32021287,32021131,32019959,32018562,32018387,32018156,32017359,32015659,32011516 Gene ID= ENSG00000170759.10 TPM= 100.52 Transcript Type= protein_coding chr10 32900319 32957894 32900319 32957894 - ENST00000396033.6@ITGB1 ENST00000396033.6 protein_coding 32957759,32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32900319 32957894,32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32901635 Gene ID= ENSG00000150093.18 TPM= 36.08 Transcript Type= protein_coding chr10 32900392 32958209 32900392 32958209 - ENST00000302278.7@ITGB1 ENST00000302278.7 protein_coding 32958145,32935492,32932515,32929822,32928094,32925871,32923585,32922640,32922257,32920245,32919885,32911886,32911448,32910223,32908368,32900392 32958209,32935558,32932600,32930044,32928264,32926109,32923740,32922735,32922346,32920385,32920084,32912124,32911670,32910455,32908534,32901635 Gene ID= ENSG00000150093.18 TPM= 426.27 Transcript Type= protein_coding chr10 33177494 33334905 33177494 33334905 - ENST00000374867.6@NRP1 ENST00000374867.6 protein_coding 33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197650,33192281,33186217,33185628,33182698,33177494 33334905,33330882,33270856,33263873,33256471,33254194,33226289,33221863,33213717,33207716,33202995,33197709,33192418,33186488,33185724,33182748,33180365 Gene ID= ENSG00000099250.17 TPM= 57.8 Transcript Type= protein_coding chr10 33177494 33334905 33177494 33334905 - ENST00000395995.5@NRP1 ENST00000395995.5 protein_coding 33334310,33330708,33270675,33263646,33256316,33254028,33226134,33221719,33213386,33207572,33202891,33197650,33192281,33186217,33185628,33177494 33334905,33330882,33270856,33263873,33256471,33254194,33226289,33221863,33213717,33207716,33202995,33197709,33192418,33186488,33185724,33180365 Gene ID= ENSG00000099250.17 TPM= 17.05 Transcript Type= protein_coding chr10 34109560 34815332 34109560 34815332 - transcript687.chr10.nic@PARD3 transcript687.chr10.nic protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317107,34284135,34269657,34131463,34119613,34109560 34815332,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34284245,34269899,34131583,34119740,34111562 Gene ID= ENSG00000148498.15 TPM= 2.96 Transcript Type= NA chr10 34109560 34815332 34109560 34815332 - transcript693.chr10.nic@PARD3 transcript693.chr10.nic protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317107,34269657,34131463,34119613,34109560 34815332,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34269899,34131583,34119740,34111562 Gene ID= ENSG00000148498.15 TPM= 2.51 Transcript Type= NA chr10 34312256 34815332 34312256 34815332 - transcript705.chr10.nic@PARD3 transcript705.chr10.nic protein_coding 34814876,34696318,34516979,34470085,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312256 34815332,34696419,34517159,34470263,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382 Gene ID= ENSG00000148498.15 TPM= 2.81 Transcript Type= NA chr10 34312256 34815332 34312256 34815332 - transcript707.chr10.nic@PARD3 transcript707.chr10.nic protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312256 34815332,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382 Gene ID= ENSG00000148498.15 TPM= 17.3 Transcript Type= NA chr10 34312256 34815332 34312256 34815332 - transcript712.chr10.nic@PARD3 transcript712.chr10.nic protein_coding 34814876,34696318,34516979,34470085,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312256 34815332,34696419,34517159,34470263,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382 Gene ID= ENSG00000148498.15 TPM= 1.9 Transcript Type= NA chr10 34343880 34815332 34343880 34815332 - transcript719.chr10.nic@PARD3 transcript719.chr10.nic protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34343880 34815332,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34346449 Gene ID= ENSG00000148498.15 TPM= 2.81 Transcript Type= NA chr10 34109560 34815325 34109560 34815325 - ENST00000545693.5@PARD3 ENST00000545693.5 protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34284135,34269657,34131463,34119613,34109560 34815325,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34284245,34269899,34131583,34119740,34111562 Gene ID= ENSG00000148498.15 TPM= 10.21 Transcript Type= protein_coding chr10 34312256 34815321 34312256 34815321 - ENST00000374776.5@PARD3 ENST00000374776.5 protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317107,34312256 34815321,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382 Gene ID= ENSG00000148498.15 TPM= 5.52 Transcript Type= protein_coding chr10 34312264 34815321 34312264 34815321 - ENST00000374773.5@PARD3 ENST00000374773.5 protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337365,34336199,34331117,34317107,34312264 34815321,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382 Gene ID= ENSG00000148498.15 TPM= 6.43 Transcript Type= protein_coding chr10 34312260 34815325 34312260 34815325 - ENST00000340077.9@PARD3 ENST00000340077.9 protein_coding 34814876,34696318,34516979,34470085,34450317,34401826,34399330,34384129,34382540,34377967,34374874,34372498,34360071,34359147,34347965,34341627,34337275,34336199,34331117,34317107,34312260 34815325,34696419,34517159,34470263,34450448,34401917,34399413,34384254,34382922,34378106,34375002,34372536,34360259,34359317,34348115,34341816,34337426,34336243,34331344,34317338,34312382 Gene ID= ENSG00000148498.15 TPM= 11.86 Transcript Type= protein_coding chr10 35008503 35090373 35008503 35090373 - transcript720.chr10.nic@CUL2 transcript720.chr10.nic protein_coding 35089896,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008503 35090373,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442 Gene ID= ENSG00000108094.14 TPM= 4.53 Transcript Type= NA chr10 35008551 35090366 35008551 35090366 - ENST00000374749.7@CUL2 ENST00000374749.7 protein_coding 35090179,35071199,35062960,35060874,35054434,35049683,35044772,35044566,35038920,35035172,35033166,35032435,35031491,35031300,35029488,35028810,35025132,35016192,35013699,35011848,35008551 35090366,35071339,35063062,35060968,35054539,35049765,35044868,35044676,35039082,35035296,35033273,35032494,35031619,35031386,35029640,35028887,35025198,35016394,35013800,35011964,35010442 Gene ID= ENSG00000108094.14 TPM= 26.26 Transcript Type= protein_coding chr10 35126842 35212959 35126842 35212959 + transcript730.chr10.nic@CREM transcript730.chr10.nic protein_coding 35126842,35148368,35178889,35179134,35188200,35206895,35211254 35127193,35148491,35178986,35179276,35188388,35207051,35212959 Gene ID= ENSG00000095794.19 TPM= 14.49 Transcript Type= NA chr10 35126842 35212959 35126842 35212959 + transcript741.chr10.nic@CREM transcript741.chr10.nic protein_coding 35126842,35148368,35178889,35179134,35206895,35211254 35127193,35148491,35178986,35179276,35207051,35212959 Gene ID= ENSG00000095794.19 TPM= 15.85 Transcript Type= NA chr10 35126845 35212462 35126845 35212462 + transcript744.chr10.nic@CREM transcript744.chr10.nic protein_coding 35126845,35178889,35179134,35188200,35206895,35211254 35127193,35178986,35179276,35188388,35207051,35212462 Gene ID= ENSG00000095794.19 TPM= 4.53 Transcript Type= NA chr10 35126943 35212959 35126943 35212959 + transcript750.chr10.nnic@CREM transcript750.chr10.nnic protein_coding 35126943,35148368,35188200,35206895,35211254 35127193,35148491,35188388,35207051,35212959 Gene ID= ENSG00000095794.19 TPM= 3.62 Transcript Type= NA chr10 35126845 35212959 35126845 35212959 + transcript752.chr10.nic@CREM transcript752.chr10.nic protein_coding 35126845,35178889,35179134,35206895,35211254 35127193,35178986,35179276,35207051,35212959 Gene ID= ENSG00000095794.19 TPM= 12.22 Transcript Type= NA chr10 35127008 35212463 35127008 35212463 + transcript761.chr10.nnic@CREM transcript761.chr10.nnic protein_coding 35127008,35188200,35206895,35211254 35127193,35188388,35207051,35212463 Gene ID= ENSG00000095794.19 TPM= 3.8 Transcript Type= NA chr10 35127203 35212464 35127203 35212464 + transcript764.chr10.nic@CREM transcript764.chr10.nic protein_coding 35127203,35148368,35206895,35211254 35127567,35148491,35207051,35212464 Gene ID= ENSG00000095794.19 TPM= 3.8 Transcript Type= NA chr10 35195909 35212959 35195909 35212959 + transcript767.chr10.nic@CREM transcript767.chr10.nic protein_coding 35195909,35201451,35206895,35211254 35196099,35201486,35207051,35212959 Gene ID= ENSG00000095794.19 TPM= 3.8 Transcript Type= NA chr10 35126923 35179847 35126923 35179847 + ENST00000374726.7@CREM ENST00000374726.7 protein_coding 35126923,35148368,35178889,35179134 35127193,35148491,35178986,35179847 Gene ID= ENSG00000095794.19 TPM= 28.98 Transcript Type= protein_coding chr10 35127117 35212435 35127117 35212435 + ENST00000460270.5@CREM ENST00000460270.5 protein_coding 35127117,35206895,35211254 35127193,35207051,35212435 Gene ID= ENSG00000095794.19 TPM= 4.53 Transcript Type= protein_coding chr10 35195147 35212923 35195147 35212923 + ENST00000356917.9@CREM ENST00000356917.9 protein_coding 35195147,35206895,35211254 35195214,35207051,35212923 Gene ID= ENSG00000095794.19 TPM= 6.52 Transcript Type= protein_coding chr10 35195133 35212465 35195133 35212465 + ENST00000488328.5@CREM ENST00000488328.5 protein_coding 35195133,35206895,35211656 35195214,35207051,35212465 Gene ID= ENSG00000095794.19 TPM= 1.81 Transcript Type= protein_coding chr10 35195917 35212495 35195917 35212495 + ENST00000344351.5@CREM ENST00000344351.5 protein_coding 35195917,35206895,35211254 35196142,35207051,35212495 Gene ID= ENSG00000095794.19 TPM= 6.52 Transcript Type= protein_coding chr10 35195909 35211853 35195909 35211853 + ENST00000468236.5@CREM ENST00000468236.5 protein_coding 35195909,35201451,35206895,35211656 35196099,35201486,35207051,35211853 Gene ID= ENSG00000095794.19 TPM= 1.81 Transcript Type= protein_coding chr10 35336429 35571793 35336429 35571793 + transcript795.chr10.nnic@CCNY transcript795.chr10.nnic protein_coding 35336429,35483404,35516523,35525964,35529973,35530124,35553019,35566023,35569054 35337207,35483478,35516623,35525999,35530030,35530243,35553185,35566185,35571793 Gene ID= ENSG00000108100.17 TPM= 4.07 Transcript Type= NA chr10 37675347 37726704 37675347 37726704 . transcript807.chr10.nnic@NA transcript807.chr10.nnic NA 37675347,37678519,37726442 37677217,37678646,37726704 Gene ID= novel_gene_chr10_808 TPM= 2.72 Transcript Type= NA chr10 37828975 37858067 37828975 37858067 - transcript820.chr10.nic@ZNF248 transcript820.chr10.nic protein_coding 37856296,37837985,37837617,37828975 37858067,37838111,37837712,37833116 Gene ID= ENSG00000198105.13 TPM= 1.81 Transcript Type= NA chr10 38010638 38056957 38010638 38056957 + transcript826.chr10.nnic@ZNF33A transcript826.chr10.nnic protein_coding 38010638,38012298,38016871,38017291,38025348,38054378 38010783,38012350,38017015,38017386,38025411,38056957 Gene ID= ENSG00000189180.15 TPM= 1.81 Transcript Type= NA chr10 38010638 38060053 38010638 38060053 + transcript827.chr10.nnic@ZNF33A transcript827.chr10.nnic protein_coding 38010638,38012298,38016871,38017291,38034326,38054375 38010783,38012350,38017015,38017386,38034400,38060053 Gene ID= ENSG00000189180.15 TPM= 3.62 Transcript Type= NA chr10 38010670 38060053 38010670 38060053 + ENST00000458705.6@ZNF33A ENST00000458705.6 protein_coding 38010670,38012298,38016871,38017291,38054378 38010783,38012350,38017015,38017386,38060053 Gene ID= ENSG00000189180.15 TPM= 10.87 Transcript Type= protein_coding chr10 38094347 38125544 38094347 38125544 + ENST00000361085.9@ZNF37A ENST00000361085.9 protein_coding 38094347,38095538,38095744,38096574,38114755,38115195,38117390 38094490,38095633,38095804,38096632,38114881,38115290,38125544 Gene ID= ENSG00000075407.18 TPM= 3.62 Transcript Type= protein_coding chr10 42581586 42638609 42581586 42638609 - transcript850.chr10.nic@ZNF33B transcript850.chr10.nic protein_coding 42638474,42636920,42632295,42631929,42594595,42581586 42638609,42636972,42632439,42632024,42594699,42583123 Gene ID= ENSG00000196693.14 TPM= 7.24 Transcript Type= NA chr10 42589110 42638609 42589110 42638609 - transcript852.chr10.nic@ZNF33B transcript852.chr10.nic protein_coding 42638474,42636920,42632295,42631929,42614282,42589110 42638609,42636972,42632439,42632024,42614358,42594699 Gene ID= ENSG00000196693.14 TPM= 6.34 Transcript Type= NA chr10 42581594 42638553 42581594 42638553 - ENST00000486187.5@ZNF33B ENST00000486187.5 protein_coding 42638474,42636920,42631929,42614282,42594595,42581594 42638553,42636972,42632024,42614358,42594699,42583123 Gene ID= ENSG00000196693.14 TPM= 1.81 Transcript Type= processed_transcript chr10 42589107 42638544 42589107 42638544 - ENST00000359467.7@ZNF33B ENST00000359467.7 protein_coding 42638474,42636920,42632295,42631929,42589107 42638544,42636972,42632439,42632024,42594699 Gene ID= ENSG00000196693.14 TPM= 2.72 Transcript Type= protein_coding chr10 42782801 42831404 42782801 42831404 + transcript860.chr10.nnic@BMS1 transcript860.chr10.nnic protein_coding 42782801,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474,42797422,42798468,42802137,42816599,42817318,42820236,42820508,42820934,42822062,42823118,42823609,42830261,42830866 42782998,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797231,42797523,42798625,42802218,42816672,42817494,42820424,42820688,42820992,42822184,42823265,42823784,42830422,42831404 Gene ID= ENSG00000165733.7 TPM= 4.53 Transcript Type= NA chr10 42782801 42834937 42782801 42834937 + ENST00000374518.5@BMS1 ENST00000374518.5 protein_coding 42782801,42784362,42785482,42787168,42790323,42791627,42792493,42792957,42793852,42796474,42797422,42798468,42802137,42816599,42817318,42820236,42820508,42820934,42822062,42823118,42823609,42830261,42830866 42782830,42784570,42785672,42787247,42790511,42791769,42792614,42793144,42793991,42797231,42797523,42798625,42802218,42816672,42817494,42820424,42820688,42820992,42822184,42823265,42823784,42830422,42834937 Gene ID= ENSG00000165733.7 TPM= 34.41 Transcript Type= protein_coding chr10 43104751 43127504 43104751 43127504 + transcript865.chr10.nic@RET transcript865.chr10.nic protein_coding 43104751,43106376,43109031,43111207,43112099,43112853,43113556,43114480,43116584,43118373,43119531,43120081,43121946,43123671,43124883,43126575 43105193,43106571,43109230,43111465,43112224,43112963,43113675,43114736,43116731,43118480,43119745,43120203,43122016,43123808,43124982,43127504 Gene ID= ENSG00000165731.18 TPM= 5.43 Transcript Type= NA chr10 43077079 43127504 43077079 43127504 + ENST00000340058.5@RET ENST00000340058.5 protein_coding 43077079,43100459,43102342,43104952,43106376,43109031,43111207,43112099,43112853,43113556,43114480,43116584,43118373,43119531,43120081,43121946,43123671,43124883,43126575 43077331,43100722,43102629,43105193,43106571,43109230,43111465,43112224,43112963,43113675,43114736,43116731,43118480,43119745,43120203,43122016,43123808,43124982,43127504 Gene ID= ENSG00000165731.18 TPM= 1.81 Transcript Type= protein_coding chr10 43138445 43185304 43138445 43185304 + transcript867.chr10.nnic@CSGALNACT2 transcript867.chr10.nnic protein_coding 43138445,43154897,43158715,43160494,43163866,43167004,43171984,43175951,43183250 43138567,43155810,43158931,43160595,43164044,43167098,43172163,43176032,43185304 Gene ID= ENSG00000169826.7 TPM= 1.81 Transcript Type= NA chr10 43138444 43185304 43138444 43185304 + transcript869.chr10.nnic@CSGALNACT2 transcript869.chr10.nnic protein_coding 43138444,43154897,43158715,43160494,43163866,43175951,43183250 43138567,43155810,43158931,43160595,43164044,43176032,43185304 Gene ID= ENSG00000169826.7 TPM= 1.81 Transcript Type= NA chr10 43138486 43185308 43138486 43185308 + ENST00000374466.3@CSGALNACT2 ENST00000374466.3 protein_coding 43138486,43154897,43158715,43160494,43163866,43167004,43175951,43183250 43138567,43155810,43158931,43160595,43164044,43167098,43176032,43185308 Gene ID= ENSG00000169826.7 TPM= 17.21 Transcript Type= protein_coding chr10 43194535 43203836 43194535 43203836 - transcript873.chr10.nic@RASGEF1A transcript873.chr10.nic protein_coding 43203298,43201808,43200667,43200182,43199676,43199092,43198933,43198004,43196976,43196476,43194535 43203836,43201945,43200888,43200256,43199768,43199194,43199012,43198195,43197099,43196548,43196268 Gene ID= ENSG00000198915.11 TPM= 1.81 Transcript Type= NA chr10 43385617 43408882 43385617 43408882 - ENST00000356053.7@HNRNPF ENST00000356053.7 protein_coding 43408727,43396456,43394630,43385617 43408882,43396590,43394688,43387936 Gene ID= ENSG00000169813.16 TPM= 3.15 Transcript Type= protein_coding chr10 43385616 43409232 43385616 43409232 - transcript881.chr10.nnic@HNRNPF transcript881.chr10.nnic protein_coding 43409131,43396456,43394630,43385616 43409232,43396590,43394688,43387936 Gene ID= ENSG00000169813.16 TPM= 146.23 Transcript Type= NA chr10 43385617 43407819 43385617 43407819 - ENST00000357065.8@HNRNPF ENST00000357065.8 protein_coding 43407717,43396456,43394630,43385617 43407819,43396590,43394688,43387936 Gene ID= ENSG00000169813.16 TPM= 77.41 Transcript Type= protein_coding chr10 43386022 43409166 43386022 43409166 - ENST00000337970.7@HNRNPF ENST00000337970.7 protein_coding 43409090,43396456,43394630,43386022 43409166,43396590,43394688,43387936 Gene ID= ENSG00000169813.16 TPM= 4.44 Transcript Type= protein_coding chr10 43606407 43617903 43606407 43617903 + ENST00000361807.7@ZNF485 ENST00000361807.7 protein_coding 43606407,43606997,43608614,43609255,43616291 43606546,43607074,43608740,43609350,43617903 Gene ID= ENSG00000198298.12 TPM= 3.62 Transcript Type= protein_coding chr10 43643863 43648873 43643863 43648873 - transcript897.chr10.nic@ZNF32 transcript897.chr10.nic protein_coding 43648802,43645958,43643863 43648873,43646202,43644801 Gene ID= ENSG00000169740.13 TPM= 1.81 Transcript Type= NA chr10 43643860 43648704 43643860 43648704 - ENST00000395797.1@ZNF32 ENST00000395797.1 protein_coding 43648585,43646064,43643860 43648704,43646202,43644801 Gene ID= ENSG00000169740.13 TPM= 7.24 Transcript Type= protein_coding chr10 43643859 43648856 43643859 43648856 - ENST00000374433.6@ZNF32 ENST00000374433.6 protein_coding 43648802,43646064,43643859 43648856,43646202,43644801 Gene ID= ENSG00000169740.13 TPM= 21.73 Transcript Type= protein_coding chr10 44370165 44385092 44370165 44385092 - ENST00000374429.6@CXCL12 ENST00000374429.6 protein_coding 44384945,44380763,44378637,44370165 44385092,44380880,44378723,44373343 Gene ID= ENSG00000107562.16 TPM= 19.92 Transcript Type= protein_coding chr10 44377133 44385092 44377133 44385092 - ENST00000343575.10@CXCL12 ENST00000343575.10 protein_coding 44384945,44380763,44377133 44385092,44380880,44378723 Gene ID= ENSG00000107562.16 TPM= 45.28 Transcript Type= protein_coding chr10 44959725 44994722 44959725 44994722 + transcript904.chr10.nic@RASSF4 transcript904.chr10.nic protein_coding 44959725,44970165,44971773,44982521,44983870,44984813,44989274,44989670,44990948,44991905,44993269 44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994722 Gene ID= ENSG00000107551.20 TPM= 1.99 Transcript Type= NA chr10 44959725 44994722 44959725 44994722 + transcript906.chr10.nic@RASSF4 transcript906.chr10.nic protein_coding 44959725,44970165,44971773,44982521,44983941,44984813,44989274,44989670,44990948,44991905,44993269 44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994722 Gene ID= ENSG00000107551.20 TPM= 4.71 Transcript Type= NA chr10 44959725 44994722 44959725 44994722 + transcript907.chr10.nnic@RASSF4 transcript907.chr10.nnic protein_coding 44959725,44970165,44971773,44982521,44983991,44984813,44989274,44989670,44990948,44991905,44993269 44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994722 Gene ID= ENSG00000107551.20 TPM= 3.8 Transcript Type= NA chr10 44959725 44994712 44959725 44994712 + transcript910.chr10.nnic@RASSF4 transcript910.chr10.nnic protein_coding 44959725,44970165,44971773,44982521,44983991,44984813,44989274,44989670,44990948,44991905 44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44994712 Gene ID= ENSG00000107551.20 TPM= 1.99 Transcript Type= NA chr10 44959798 44994712 44959798 44994712 + transcript911.chr10.nic@RASSF4 transcript911.chr10.nic protein_coding 44959798,44970165,44971773,44982521,44984022,44984813,44989274,44989670,44990948,44991905 44959866,44970264,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44994712 Gene ID= ENSG00000107551.20 TPM= 2.9 Transcript Type= NA chr10 44959781 44994722 44959781 44994722 + transcript913.chr10.nic@RASSF4 transcript913.chr10.nic protein_coding 44959781,44970165,44982521,44983941,44984813,44989274,44989670,44990948,44991905,44993269 44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994722 Gene ID= ENSG00000107551.20 TPM= 4.53 Transcript Type= NA chr10 44959793 44994722 44959793 44994722 + transcript915.chr10.nnic@RASSF4 transcript915.chr10.nnic protein_coding 44959793,44970165,44982521,44983991,44984813,44989274,44989670,44990948,44991905,44993269 44959866,44971848,44982663,44984113,44984970,44989375,44989721,44991069,44992002,44994722 Gene ID= ENSG00000107551.20 TPM= 1.81 Transcript Type= NA chr10 44976129 44978810 44976129 44978810 - ENST00000298295.3@C10orf10 ENST00000298295.3 protein_coding 44978618,44976129 44978810,44978055 Gene ID= ENSG00000165507.8 TPM= 316.94 Transcript Type= protein_coding chr10 45000475 45005326 45000475 45005326 + ENST00000298299.3@ZNF22 ENST00000298299.3 protein_coding 45000475,45003280 45000978,45005326 Gene ID= ENSG00000165512.4 TPM= 59.77 Transcript Type= protein_coding chr10 45374155 45446121 45374155 45446121 + transcript923.chr10.nnic@ALOX5 transcript923.chr10.nnic protein_coding 45374155,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443125,45443416,45443728,45444116,45445508 45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443216,45443537,45443828,45444286,45446121 Gene ID= ENSG00000012779.10 TPM= 2.42 Transcript Type= NA chr10 45374155 45446121 45374155 45446121 + transcript925.chr10.nic@ALOX5 transcript925.chr10.nic protein_coding 45374155,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443728,45444116,45445508 45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443537,45443828,45444286,45446121 Gene ID= ENSG00000012779.10 TPM= 5.13 Transcript Type= NA chr10 45374222 45429799 45374222 45429799 + transcript926.chr10.nnic@ALOX5 transcript926.chr10.nnic protein_coding 45374222,45382483,45395855,45412191,45424041,45424960,45428321 45374429,45382681,45395936,45412313,45424147,45425132,45429799 Gene ID= ENSG00000012779.10 TPM= 1.81 Transcript Type= NA chr10 45374227 45446115 45374227 45446115 + ENST00000374391.6@ALOX5 ENST00000374391.6 protein_coding 45374227,45382483,45395855,45412191,45424041,45424960,45428618,45440430,45441344,45443038,45443416,45443728,45444116,45445508 45374429,45382681,45395936,45412313,45424147,45425132,45428764,45440633,45441430,45443216,45443537,45443828,45444286,45446115 Gene ID= ENSG00000012779.10 TPM= 48.6 Transcript Type= protein_coding chr10 45454586 45594621 45454586 45594621 - transcript927.chr10.nnic@MARCH8 transcript927.chr10.nnic protein_coding 45594235,45533110,45489367,45480579,45479859,45464239,45461231,45459120,45454586 45594621,45533289,45489417,45480658,45480053,45464327,45461411,45459267,45458543 Gene ID= ENSG00000165406.15 TPM= 9.35 Transcript Type= NA chr10 45454586 45594846 45454586 45594846 - transcript929.chr10.nic@MARCH8 transcript929.chr10.nic protein_coding 45594235,45553112,45533110,45489367,45464239,45461231,45459120,45454586 45594846,45553204,45533289,45489417,45464327,45461411,45459267,45458543 Gene ID= ENSG00000165406.15 TPM= 14.79 Transcript Type= NA chr10 45454586 45594900 45454586 45594900 - transcript930.chr10.nnic@MARCH8 transcript930.chr10.nnic protein_coding 45594235,45590524,45533110,45489367,45464239,45461231,45459120,45454586 45594900,45590574,45533289,45489417,45464327,45461411,45459267,45458543 Gene ID= ENSG00000165406.15 TPM= 11.17 Transcript Type= NA chr10 45613374 45672786 45613374 45672786 - transcript938.chr10.nic@ZFAND4 transcript938.chr10.nic protein_coding 45672272,45663542,45652984,45651966,45648294,45639816,45625951,45624583,45618140,45613374 45672786,45663842,45653059,45652033,45648534,45639963,45627105,45624637,45618260,45616571 Gene ID= ENSG00000172671.19 TPM= 1.81 Transcript Type= NA chr10 45615593 45672786 45615593 45672786 - transcript940.chr10.nnic@ZFAND4 transcript940.chr10.nnic protein_coding 45672272,45663542,45652984,45651966,45648963,45648294,45639816,45625951,45624583,45615593 45672786,45663842,45653059,45652033,45649102,45648534,45639963,45627105,45624637,45618260 Gene ID= ENSG00000172671.19 TPM= 4.98 Transcript Type= NA chr10 45615593 45672786 45615593 45672786 - transcript945.chr10.nnic@ZFAND4 transcript945.chr10.nnic protein_coding 45672272,45663542,45648294,45639816,45625951,45624583,45618140,45615593 45672786,45663842,45648534,45639963,45627105,45624637,45618260,45616571 Gene ID= ENSG00000172671.19 TPM= 1.81 Transcript Type= NA chr10 45616977 45672594 45616977 45672594 - transcript952.chr10.nnic@ZFAND4 transcript952.chr10.nnic protein_coding 45672272,45663542,45648294,45639816,45625951,45624583,45616977 45672594,45663842,45648534,45639963,45627105,45624637,45618260 Gene ID= ENSG00000172671.19 TPM= 2.26 Transcript Type= NA chr10 45617764 45672764 45617764 45672764 - transcript960.chr10.nnic@ZFAND4 transcript960.chr10.nnic protein_coding 45672250,45663542,45648294,45639816,45617764 45672764,45663842,45648534,45639963,45618260 Gene ID= ENSG00000172671.19 TPM= 1.81 Transcript Type= NA chr10 45727195 45792963 45727195 45792963 + transcript969.chr10.nnic@WASHC2C transcript969.chr10.nnic protein_coding 45727195,45727417,45728906,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792963 Gene ID= ENSG00000172661.17 TPM= 6.12 Transcript Type= NA chr10 45727195 45792963 45727195 45792963 + transcript970.chr10.nnic@WASHC2C transcript970.chr10.nnic protein_coding 45727195,45727417,45728862,45737983,45740073,45741980,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45742073,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45787247,45789491,45790533,45792963 Gene ID= ENSG00000172661.17 TPM= 3.22 Transcript Type= NA chr10 45727195 45792963 45727195 45792963 + transcript973.chr10.nnic@WASHC2C transcript973.chr10.nnic protein_coding 45727195,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792963 Gene ID= ENSG00000172661.17 TPM= 7.03 Transcript Type= NA chr10 45727195 45792963 45727195 45792963 + transcript974.chr10.nic@WASHC2C transcript974.chr10.nic protein_coding 45727195,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792963 Gene ID= ENSG00000172661.17 TPM= 4.31 Transcript Type= NA chr10 45727607 45792963 45727607 45792963 + transcript979.chr10.nnic@WASHC2C transcript979.chr10.nnic protein_coding 45727607,45728906,45737983,45740073,45741823,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261 45727882,45729026,45738045,45740246,45741936,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792963 Gene ID= ENSG00000172661.17 TPM= 2.32 Transcript Type= NA chr10 45727195 45792963 45727195 45792963 + transcript984.chr10.nnic@WASHC2C transcript984.chr10.nnic protein_coding 45727195,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45752588,45753180,45754486,45754936,45757012,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45752706,45753237,45754545,45755115,45757139,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792963 Gene ID= ENSG00000172661.17 TPM= 2.5 Transcript Type= NA chr10 45727195 45729966 45727195 45729966 + transcript989.chr10.nic@WASHC2C transcript989.chr10.nic protein_coding 45727195,45727417,45728862 45727320,45727539,45729966 Gene ID= ENSG00000172661.17 TPM= 1.81 Transcript Type= NA chr10 45727236 45792961 45727236 45792961 + ENST00000336378.8@WASHC2C ENST00000336378.8 protein_coding 45727236,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757010,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45786612,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755113,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45786674,45787247,45789491,45790533,45792961 Gene ID= ENSG00000172661.17 TPM= 26.04 Transcript Type= protein_coding chr10 45727200 45792961 45727200 45792961 + ENST00000540872.5@WASHC2C ENST00000540872.5 protein_coding 45727200,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45787247,45789491,45790533,45792961 Gene ID= ENSG00000172661.17 TPM= 1.41 Transcript Type= protein_coding chr10 45727219 45792961 45727219 45792961 + ENST00000374362.6@WASHC2C ENST00000374362.6 protein_coding 45727219,45727417,45728862,45737983,45740073,45743390,45744821,45746600,45750096,45750751,45751482,45752588,45753180,45754486,45754936,45757012,45759315,45763388,45765679,45769449,45773256,45777273,45778953,45784565,45784821,45785509,45787035,45788871,45790356,45792261 45727320,45727539,45729026,45738045,45740246,45743483,45744882,45746647,45750206,45750838,45751553,45752706,45753237,45754545,45755115,45757139,45759401,45763489,45765810,45769618,45773358,45777425,45779135,45784693,45784901,45785631,45787247,45789491,45790533,45792961 Gene ID= ENSG00000172661.17 TPM= 1.41 Transcript Type= protein_coding chr10 45972449 46003734 45972449 46003734 + ENST00000580018.3@TIMM23 ENST00000580018.3 protein_coding 45972449,45975454,45982523,45982846,45985383,45988737,46003203 45972730,45975512,45982616,45982930,45985441,45988847,46003734 Gene ID= ENSG00000265354.3 TPM= 30.79 Transcript Type= protein_coding chr10 46005091 46030714 46005091 46030714 - ENST00000581486.5@NCOA4 ENST00000581486.5 protein_coding 46030526,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005091 46030714,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597 Gene ID= ENSG00000266412.5 TPM= 130.62 Transcript Type= protein_coding chr10 46005088 46023455 46005088 46023455 - ENST00000585132.5@NCOA4 ENST00000585132.5 protein_coding 46023330,46016540,46015126,46014854,46014444,46013550,46012883,46010223,46009411,46005088 46023455,46016694,46015266,46014942,46014552,46013639,46013026,46011206,46009551,46006597 Gene ID= ENSG00000266412.5 TPM= 25.58 Transcript Type= protein_coding chr10 46578217 46592062 46578217 46592062 + ENST00000374323.8@SYT15 ENST00000374323.8 protein_coding 46578217,46580894,46581896,46583732,46584495,46585598,46587505 46579175,46581036,46582191,46583902,46584615,46585777,46592062 Gene ID= ENSG00000204176.13 TPM= 6.34 Transcript Type= protein_coding chr10 46786839 46810337 46786839 46810337 + transcript1011.chr10.nnic@BMS1P1 transcript1011.chr10.nnic transcribed_unprocessed_pseudogene 46786839,46788397,46789497,46790962,46794727,46795806,46796672,46798029,46803846,46808996 46786900,46788600,46789686,46791041,46794915,46795953,46796793,46798168,46803947,46810337 Gene ID= ENSG00000204177.10 TPM= 1.81 Transcript Type= NA chr10 46911430 47002320 46911430 47002320 + transcript1016.chr10.nic@PTPN20 transcript1016.chr10.nic protein_coding 46911430,46932377,46940623,46943918,46946563,46964986,46967957,46984230,46987340,46999912,47000676 46911501,46932533,46940717,46944015,46946675,46965137,46968047,46984564,46987555,46999974,47002320 Gene ID= ENSG00000204179.10 TPM= 1.81 Transcript Type= NA chr10 46911439 47002320 46911439 47002320 + transcript1025.chr10.nnic@PTPN20 transcript1025.chr10.nnic protein_coding 46911439,46999912,47000676 46911501,46999974,47002320 Gene ID= ENSG00000204179.10 TPM= 1.81 Transcript Type= NA chr10 46911428 47002322 46911428 47002322 + ENST00000395722.7@PTPN20 ENST00000395722.7 protein_coding 46911428,46943918,46946563,46999912,47000676 46911501,46944015,46946675,46999974,47002322 Gene ID= ENSG00000204179.10 TPM= 3.62 Transcript Type= protein_coding chr10 47467996 47484158 47467996 47484158 - ENST00000611843.4@ANXA8 ENST00000611843.4 protein_coding 47483913,47479798,47478533,47477081,47476232,47475493,47474945,47474305,47473970,47472133,47471262,47467996 47484158,47479888,47478741,47477194,47476322,47475572,47475004,47474398,47474065,47472191,47471384,47468906 Gene ID= ENSG00000265190.6 TPM= 2.72 Transcript Type= protein_coding chr10 48446035 48524447 48446035 48524447 - transcript1048.chr10.nic@ARHGAP22 transcript1048.chr10.nic protein_coding 48524053,48479636,48459684,48455002,48454088,48453304,48450261,48446035 48524447,48479764,48459891,48455134,48454161,48453425,48451140,48446619 Gene ID= ENSG00000128805.14 TPM= 2.72 Transcript Type= NA chr10 48446034 48605093 48446034 48605093 - ENST00000249601.8@ARHGAP22 ENST00000249601.8 protein_coding 48604763,48582953,48555463,48479636,48459684,48455002,48454088,48453304,48450261,48446034 48605093,48583152,48555550,48479764,48459891,48455134,48454161,48453425,48451140,48446619 Gene ID= ENSG00000128805.14 TPM= 2.72 Transcript Type= protein_coding chr10 49014370 49115497 49014370 49115497 - transcript1051.chr10.nnic@VSTM4 transcript1051.chr10.nnic protein_coding 49115431,49107594,49085955,49077219,49064703,49048478,49046983,49018543,49014370 49115497,49107995,49086023,49077326,49064736,49048584,49047044,49019775,49017983 Gene ID= ENSG00000165633.12 TPM= 2.72 Transcript Type= NA chr10 49014245 49115509 49014245 49115509 - ENST00000332853.8@VSTM4 ENST00000332853.8 protein_coding 49115431,49107594,49085955,49077219,49064703,49048478,49046983,49014245 49115509,49107995,49086023,49077326,49064736,49048584,49047044,49019775 Gene ID= ENSG00000165633.12 TPM= 83.31 Transcript Type= protein_coding chr10 49102172 49115509 49102172 49115509 - ENST00000298454.3@VSTM4 ENST00000298454.3 protein_coding 49115431,49107594,49102172 49115509,49107995,49103860 Gene ID= ENSG00000165633.12 TPM= 1.81 Transcript Type= protein_coding chr10 49515201 49539090 49515201 49539090 - transcript1068.chr10.nnic@ERCC6 transcript1068.chr10.nnic protein_coding 49538962,49532543,49530720,49528417,49515201 49539090,49532978,49530840,49528525,49517121 Gene ID= ENSG00000225830.12 TPM= 2.72 Transcript Type= NA chr10 49515201 49539040 49515201 49539040 - ENST00000447839.6@ERCC6 ENST00000447839.6 protein_coding 49538962,49532543,49530720,49528417,49524033,49515201 49539040,49532978,49530840,49528525,49524777,49517121 Gene ID= ENSG00000225830.12 TPM= 4.53 Transcript Type= protein_coding chr10 49734643 49762323 49734643 49762323 - ENST00000374103.8@OGDHL ENST00000374103.8 protein_coding 49762239,49758389,49756776,49752638,49752133,49751827,49750839,49749726,49747029,49746750,49745798,49745344,49744650,49743994,49742828,49740710,49739661,49738191,49737947,49737786,49736357,49736023,49734643 49762323,49758593,49756946,49752740,49752248,49751981,49750985,49749816,49747208,49746878,49745977,49745496,49744752,49744122,49742978,49740837,49739839,49738262,49738072,49737858,49736520,49736177,49735351 Gene ID= ENSG00000197444.9 TPM= 12.68 Transcript Type= protein_coding chr10 49818281 49942008 49818281 49942008 - transcript1073.chr10.nnic@PARG transcript1073.chr10.nnic protein_coding 49941509,49935076,49933177,49932096,49922547,49922336,49915917,49908455,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818281 49942008,49935142,49934163,49932283,49922669,49922419,49915991,49908541,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494 Gene ID= ENSG00000227345.8 TPM= 1.81 Transcript Type= NA chr10 49818281 49942008 49818281 49942008 - transcript1076.chr10.nnic@PARG transcript1076.chr10.nnic protein_coding 49941509,49935076,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818281 49942008,49935142,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494 Gene ID= ENSG00000227345.8 TPM= 23.09 Transcript Type= NA chr10 49818281 49941991 49818281 49941991 - transcript1080.chr10.nnic@PARG transcript1080.chr10.nnic protein_coding 49941509,49933177,49932096,49922547,49922336,49915917,49885203,49879673,49869476,49865321,49861588,49857306,49843554,49841950,49832803,49820165,49818281 49941991,49934163,49932283,49922669,49922419,49915991,49885295,49879830,49869555,49865381,49861663,49857453,49843632,49842058,49832908,49820293,49819494 Gene ID= ENSG00000227345.8 TPM= 3.17 Transcript Type= NA chr10 50067893 50133508 50067893 50133508 + transcript1093.chr10.nnic@WASHC2A transcript1093.chr10.nnic protein_coding 50067893,50068105,50069591,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133508 Gene ID= ENSG00000099290.15 TPM= 2.63 Transcript Type= NA chr10 50067888 50133506 50067888 50133506 + ENST00000351071.10@WASHC2A ENST00000351071.10 protein_coding 50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133506 Gene ID= ENSG00000099290.15 TPM= 10.48 Transcript Type= protein_coding chr10 50067953 50133508 50067953 50133508 + transcript1095.chr10.nnic@WASHC2A transcript1095.chr10.nnic protein_coding 50067953,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50127160,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50127222,50127795,50130039,50131078,50133508 Gene ID= ENSG00000099290.15 TPM= 2.33 Transcript Type= NA chr10 50067955 50133508 50067955 50133508 + transcript1096.chr10.nic@WASHC2A transcript1096.chr10.nic protein_coding 50067955,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133508 Gene ID= ENSG00000099290.15 TPM= 3.23 Transcript Type= NA chr10 50067893 50133508 50067893 50133508 + transcript1097.chr10.nnic@WASHC2A transcript1097.chr10.nnic protein_coding 50067893,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133508 Gene ID= ENSG00000099290.15 TPM= 7.15 Transcript Type= NA chr10 50067888 50133506 50067888 50133506 + ENST00000314664.11@WASHC2A ENST00000314664.11 protein_coding 50067888,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50127795,50130039,50131078,50133506 Gene ID= ENSG00000099290.15 TPM= 2.33 Transcript Type= protein_coding chr10 50067893 50133508 50067893 50133508 + transcript1100.chr10.nnic@WASHC2A transcript1100.chr10.nnic protein_coding 50067893,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127795,50130039,50131078,50133508 Gene ID= ENSG00000099290.15 TPM= 3.23 Transcript Type= NA chr10 50067961 50133146 50067961 50133146 + ENST00000282633.9@WASHC2A ENST00000282633.9 protein_coding 50067961,50068105,50069547,50078675,50080758,50084072,50085497,50087275,50090776,50091431,50092162,50093268,50093860,50095148,50095599,50097675,50099978,50104042,50106334,50110101,50113895,50117906,50119587,50125113,50125369,50126057,50127160,50127583,50129419,50130901,50132806 50068008,50068227,50069711,50078737,50080931,50084165,50085558,50087322,50090886,50091518,50092233,50093386,50093917,50095207,50095778,50097802,50100064,50104143,50106465,50110270,50113997,50118058,50119769,50125241,50125449,50126179,50127222,50127795,50130039,50131078,50133146 Gene ID= ENSG00000099290.15 TPM= 19.32 Transcript Type= protein_coding chr10 50305602 50623394 50305602 50623394 - transcript1108.chr10.nnic@SGMS1 transcript1108.chr10.nnic protein_coding 50622701,50590153,50519831,50466890,50460673,50433476,50343492,50327205,50311262,50307982,50305602 50623394,50590247,50519921,50466932,50460814,50433556,50344345,50327322,50311415,50308148,50307321 Gene ID= ENSG00000198964.13 TPM= 3.92 Transcript Type= NA chr10 50305602 50418468 50305602 50418468 - transcript1113.chr10.nic@SGMS1 transcript1113.chr10.nic protein_coding 50418064,50343492,50327205,50311262,50307982,50305602 50418468,50344345,50327322,50311415,50308148,50307321 Gene ID= ENSG00000198964.13 TPM= 12.07 Transcript Type= NA chr10 50305600 50623983 50305600 50623983 - ENST00000361781.6@SGMS1 ENST00000361781.6 protein_coding 50623707,50590153,50519831,50466890,50460673,50433476,50343492,50327205,50311262,50307982,50305600 50623983,50590247,50519921,50466932,50460814,50433556,50344345,50327322,50311415,50308148,50307321 Gene ID= ENSG00000198964.13 TPM= 25.65 Transcript Type= protein_coding chr10 50624943 50631882 50624943 50631882 + transcript1115.chr10.nnic@SGMS1-AS1 transcript1115.chr10.nnic antisense_RNA 50624943,50626670,50627338,50629031,50629577 50625191,50626805,50627609,50629178,50631882 Gene ID= ENSG00000226200.6 TPM= 6.34 Transcript Type= NA chr10 50624116 50631636 50624116 50631636 + transcript1116.chr10.nnic@SGMS1-AS1 transcript1116.chr10.nnic antisense_RNA 50624116,50626670,50627420,50629031,50629577 50625191,50626805,50627609,50629178,50631636 Gene ID= ENSG00000226200.6 TPM= 3.62 Transcript Type= NA chr10 50739318 50757188 50739318 50757188 + ENST00000374007.5@ASAH2B ENST00000374007.5 protein_coding 50739318,50742915,50745128,50749343,50752468,50754551 50740002,50743010,50745274,50749402,50752556,50757188 Gene ID= ENSG00000204147.9 TPM= 12.68 Transcript Type= protein_coding chr10 51804585 51911205 51804585 51911205 + transcript1132.chr10.nnic@PRKG1 transcript1132.chr10.nnic protein_coding 51804585,51907507,51908755 51804690,51907570,51911205 Gene ID= ENSG00000185532.15 TPM= 2.72 Transcript Type= NA chr10 51804585 51956382 51804585 51956382 + transcript1133.chr10.nnic@PRKG1 transcript1133.chr10.nnic protein_coding 51804585,51907507,51955834 51804690,51907570,51956382 Gene ID= ENSG00000185532.15 TPM= 2.72 Transcript Type= NA chr10 54131367 54664292 54131367 54664292 - transcript1139.chr10.nic@PCDH15 transcript1139.chr10.nic protein_coding 54664172,54527812,54378782,54369120,54346365,54329596,54317271,54236823,54213936,54195683,54185134,54183444,54153100,54131367 54664292,54527877,54378942,54369275,54346484,54329706,54317441,54236931,54214048,54195889,54185268,54183593,54153293,54133007 Gene ID= ENSG00000150275.17 TPM= 1.81 Transcript Type= NA chr10 56357228 56361275 56357228 56361275 - ENST00000373944.7@ZWINT ENST00000373944.7 protein_coding 56361196,56360293,56360018,56359687,56359476,56358805,56358556,56358377,56357228 56361275,56360383,56360141,56359853,56359532,56358947,56358724,56358459,56358185 Gene ID= ENSG00000122952.16 TPM= 8.15 Transcript Type= protein_coding chr10 56357255 56361272 56357255 56361272 - transcript1154.chr10.nnic@ZWINT transcript1154.chr10.nnic protein_coding 56361196,56360293,56360018,56359687,56359476,56358805,56358556,56358377,56357255 56361272,56360383,56360141,56359853,56359532,56358947,56358724,56358459,56358148 Gene ID= ENSG00000122952.16 TPM= 1.81 Transcript Type= NA chr10 56357438 56361273 56357438 56361273 - ENST00000395405.5@ZWINT ENST00000395405.5 protein_coding 56361196,56360293,56360018,56359687,56359476,56358805,56358556,56357438 56361273,56360383,56360141,56359853,56359532,56358947,56358724,56358459 Gene ID= ENSG00000122952.16 TPM= 1.81 Transcript Type= protein_coding chr10 58191517 58267934 58191517 58267934 - ENST00000373935.3@IPMK ENST00000373935.3 protein_coding 58267422,58237729,58227043,58216145,58199240,58191517 58267934,58237814,58227139,58216317,58199321,58196698 Gene ID= ENSG00000151151.5 TPM= 5.43 Transcript Type= protein_coding chr10 58269058 58289586 58269058 58289586 + ENST00000333926.5@CISD1 ENST00000333926.5 protein_coding 58269058,58277117,58287561 58269304,58277322,58289586 Gene ID= ENSG00000122873.11 TPM= 46.18 Transcript Type= protein_coding chr10 58334975 58370753 58334975 58370753 + ENST00000373910.8@UBE2D1 ENST00000373910.8 protein_coding 58334975,58361338,58361495,58363609,58364771,58367923,58368720 58335225,58361401,58361526,58363686,58364876,58368016,58370753 Gene ID= ENSG00000072401.14 TPM= 40.3 Transcript Type= protein_coding chr10 58334979 58370751 58334979 58370751 + ENST00000615793.1@UBE2D1 ENST00000615793.1 protein_coding 58334979,58361338,58363609,58364771,58367923,58368720 58335225,58361401,58363686,58364876,58368016,58370751 Gene ID= ENSG00000072401.14 TPM= 3.17 Transcript Type= protein_coding chr10 58385022 58399221 58385022 58399221 + ENST00000487519.5@TFAM ENST00000487519.5 protein_coding 58385022,58386220,58388190,58388670,58390765,58394358,58394928 58385648,58386338,58388260,58388819,58390860,58394414,58399221 Gene ID= ENSG00000108064.10 TPM= 20.83 Transcript Type= protein_coding chr10 59176590 59247774 59176590 59247774 + ENST00000373880.8@PHYHIPL ENST00000373880.8 protein_coding 59176590,59234304,59236483,59238588,59245057 59176959,59234500,59236657,59238705,59247774 Gene ID= ENSG00000165443.11 TPM= 40.75 Transcript Type= protein_coding chr10 59246131 59362581 59246131 59362581 - transcript1168.chr10.nic@FAM13C transcript1168.chr10.nic protein_coding 59362399,59361026,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246131 59362581,59361110,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252998,59251676,59247737 Gene ID= ENSG00000148541.12 TPM= 5.43 Transcript Type= NA chr10 59246122 59362549 59246122 59362549 - transcript1170.chr10.nic@FAM13C transcript1170.chr10.nic protein_coding 59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246122 59362549,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252995,59251676,59247737 Gene ID= ENSG00000148541.12 TPM= 6.34 Transcript Type= NA chr10 59321460 59362509 59321460 59362509 - transcript1185.chr10.nic@FAM13C transcript1185.chr10.nic protein_coding 59362399,59355887,59352270,59321460 59362509,59355943,59352474,59324106 Gene ID= ENSG00000148541.12 TPM= 1.81 Transcript Type= NA chr10 59246129 59362550 59246129 59362550 - ENST00000618804.4@FAM13C ENST00000618804.4 protein_coding 59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59264085,59262434,59254348,59252799,59251575,59246129 59362550,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59264166,59262645,59254443,59252998,59251676,59247737 Gene ID= ENSG00000148541.12 TPM= 23.54 Transcript Type= protein_coding chr10 59246179 59362594 59246179 59362594 - ENST00000611933.4@FAM13C ENST00000611933.4 protein_coding 59362399,59355887,59352270,59323988,59302801,59283363,59269899,59268553,59254348,59252799,59251575,59246179 59362594,59355943,59352474,59324106,59302864,59283447,59270109,59268691,59254443,59252998,59251676,59247737 Gene ID= ENSG00000148541.12 TPM= 8.15 Transcript Type= protein_coding chr10 59650762 59710316 59650762 59710316 - transcript1190.chr10.nnic@SLC16A9 transcript1190.chr10.nnic protein_coding 59709479,59688275,59684096,59672770,59664227,59653675,59650762 59710316,59688408,59684327,59672913,59664322,59654589,59652950 Gene ID= ENSG00000165449.11 TPM= 13.84 Transcript Type= NA chr10 59650762 59710309 59650762 59710309 - transcript1195.chr10.nnic@SLC16A9 transcript1195.chr10.nnic protein_coding 59709479,59684096,59672770,59664227,59653675,59650762 59710309,59684327,59672913,59664322,59653809,59652950 Gene ID= ENSG00000165449.11 TPM= 28.71 Transcript Type= NA chr10 59650762 59710264 59650762 59710264 - transcript1198.chr10.nnic@SLC16A9 transcript1198.chr10.nnic protein_coding 59709479,59684096,59672770,59664227,59653675,59650762 59710264,59684197,59672913,59664322,59654589,59652950 Gene ID= ENSG00000165449.11 TPM= 67.72 Transcript Type= NA chr10 59650762 59709891 59650762 59709891 - transcript1207.chr10.nnic@SLC16A9 transcript1207.chr10.nnic protein_coding 59709479,59684096,59672770,59664227,59653549,59650762 59709891,59684327,59672913,59664322,59653616,59652950 Gene ID= ENSG00000165449.11 TPM= 14.53 Transcript Type= NA chr10 59650761 59710079 59650761 59710079 - ENST00000395348.7@SLC16A9 ENST00000395348.7 protein_coding 59709479,59684096,59672770,59664227,59653675,59650761 59710079,59684327,59672913,59664322,59654589,59652950 Gene ID= ENSG00000165449.11 TPM= 321.31 Transcript Type= protein_coding chr10 60778454 60794852 60778454 60794852 + ENST00000395284.7@CDK1 ENST00000395284.7 protein_coding 60778454,60780141,60784705,60785664,60788060,60791890,60792148,60793877 60778570,60780202,60784861,60785787,60788230,60792053,60792289,60794852 Gene ID= ENSG00000170312.15 TPM= 2.72 Transcript Type= protein_coding chr10 60869441 60944182 60869441 60944182 - transcript1232.chr10.nnic@RHOBTB1 transcript1232.chr10.nnic protein_coding 60943971,60941804,60936213,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869441 60944182,60941854,60936284,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651 Gene ID= ENSG00000072422.16 TPM= 3.6 Transcript Type= NA chr10 60869438 61001440 60869438 61001440 - ENST00000357917.4@RHOBTB1 ENST00000357917.4 protein_coding 61001399,60985845,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869438 61001440,60985945,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651 Gene ID= ENSG00000072422.16 TPM= 1.79 Transcript Type= protein_coding chr10 60869441 60944984 60869441 60944984 - transcript1240.chr10.nnic@RHOBTB1 transcript1240.chr10.nnic protein_coding 60944650,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869441 60944984,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651 Gene ID= ENSG00000072422.16 TPM= 3.6 Transcript Type= NA chr10 60869441 60944186 60869441 60944186 - transcript1244.chr10.nnic@RHOBTB1 transcript1244.chr10.nnic protein_coding 60943971,60941804,60911351,60892810,60888212,60886112,60877908,60874954,60872185,60869441 60944186,60941854,60911552,60892995,60889185,60886230,60878058,60875042,60872290,60871651 Gene ID= ENSG00000072422.16 TPM= 3.38 Transcript Type= NA chr10 60869442 60944265 60869442 60944265 - transcript1245.chr10.nic@RHOBTB1 transcript1245.chr10.nic protein_coding 60943971,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60869442 60944265,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290 Gene ID= ENSG00000072422.16 TPM= 2.11 Transcript Type= NA chr10 60869438 60944247 60869438 60944247 - ENST00000337910.9@RHOBTB1 ENST00000337910.9 protein_coding 60943971,60941804,60911351,60910887,60892810,60888212,60886112,60877908,60874954,60872185,60869438 60944247,60941854,60911552,60910990,60892995,60889185,60886230,60878058,60875042,60872290,60871651 Gene ID= ENSG00000072422.16 TPM= 28.05 Transcript Type= protein_coding chr10 61406647 61453450 61406647 61453450 - ENST00000399298.7@TMEM26 ENST00000399298.7 protein_coding 61452891,61436170,61431219,61428926,61413459,61406647 61453450,61436248,61431332,61429146,61413535,61410746 Gene ID= ENSG00000196932.11 TPM= 1.81 Transcript Type= protein_coding chr10 63133290 63155026 63133290 63155026 + ENST00000277746.10@NRBF2 ENST00000277746.10 protein_coding 63133290,63146209,63152150,63153511 63133500,63146293,63152190,63155026 Gene ID= ENSG00000148572.15 TPM= 40.75 Transcript Type= protein_coding chr10 63521353 63624576 63521353 63624576 + transcript1260.chr10.nnic@REEP3 transcript1260.chr10.nnic protein_coding 63521353,63566338,63594778,63599170,63610187,63619655,63620813 63521577,63566410,63594854,63599283,63610334,63619800,63624576 Gene ID= ENSG00000165476.13 TPM= 8.15 Transcript Type= NA chr10 63521353 63599359 63521353 63599359 + transcript1262.chr10.nic@REEP3 transcript1262.chr10.nic protein_coding 63521353,63566338,63594778,63598024,63599170 63521577,63566410,63594854,63598144,63599359 Gene ID= ENSG00000165476.13 TPM= 1.81 Transcript Type= NA chr10 67796668 67838121 67796668 67838121 - transcript1264.chr10.nnic@DNAJC12 transcript1264.chr10.nnic protein_coding 67837934,67835392,67823314,67811524,67805583,67796668 67838121,67835525,67823392,67811663,67805787,67797210 Gene ID= ENSG00000108176.14 TPM= 1.81 Transcript Type= NA chr10 67796665 67838164 67796665 67838164 - ENST00000225171.6@DNAJC12 ENST00000225171.6 protein_coding 67837934,67823314,67811524,67805583,67796665 67838164,67823392,67811663,67805787,67797210 Gene ID= ENSG00000108176.14 TPM= 28.98 Transcript Type= protein_coding chr10 67884622 67918337 67884622 67918337 + transcript1273.chr10.nnic@SIRT1 transcript1273.chr10.nnic protein_coding 67884622,67887417,67888882,67906790,67908046,67909256,67912474,67916265 67885151,67887533,67889123,67906937,67908125,67909442,67913031,67918337 Gene ID= ENSG00000096717.11 TPM= 1.81 Transcript Type= NA chr10 67884622 67918388 67884622 67918388 + transcript1274.chr10.nnic@SIRT1 transcript1274.chr10.nnic protein_coding 67884622,67887417,67906790,67908046,67909256,67912474,67916265 67885151,67887533,67906937,67908125,67909442,67913031,67918388 Gene ID= ENSG00000096717.11 TPM= 1.81 Transcript Type= NA chr10 67884669 67918390 67884669 67918390 + ENST00000212015.10@SIRT1 ENST00000212015.10 protein_coding 67884669,67887417,67888882,67891402,67906790,67908046,67909256,67912474,67916265 67885151,67887533,67889123,67891554,67906937,67908125,67909442,67913031,67918390 Gene ID= ENSG00000096717.11 TPM= 19.02 Transcript Type= protein_coding chr10 67922485 68075199 67922485 68075199 - transcript1281.chr10.nnic@HERC4 transcript1281.chr10.nnic protein_coding 68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67922485 68075199,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990249,67988835,67966802,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139 Gene ID= ENSG00000148634.15 TPM= 2.72 Transcript Type= NA chr10 67922485 68075091 67922485 68075091 - transcript1282.chr10.nic@HERC4 transcript1282.chr10.nic protein_coding 68074650,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67922485 68075091,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139 Gene ID= ENSG00000148634.15 TPM= 3.17 Transcript Type= NA chr10 67966607 68075341 67966607 68075341 - transcript1290.chr10.nic@HERC4 transcript1290.chr10.nic protein_coding 68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966607 68075341,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802 Gene ID= ENSG00000148634.15 TPM= 2.72 Transcript Type= NA chr10 67921908 68075283 67921908 68075283 - ENST00000395198.7@HERC4 ENST00000395198.7 protein_coding 68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67959113,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67921908 68075283,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67959136,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139 Gene ID= ENSG00000148634.15 TPM= 16.3 Transcript Type= protein_coding chr10 67922489 68075348 67922489 68075348 - ENST00000373700.8@HERC4 ENST00000373700.8 protein_coding 68075144,68073657,68072883,68044404,68038093,68033965,68032778,68025546,68014026,67992606,67992199,67991140,67990904,67990211,67988663,67966683,67956878,67954963,67954595,67940939,67939588,67936153,67932597,67925085,67922489 68075348,68073686,68073186,68044563,68038169,68034186,68032869,68025676,68014186,67992682,67992323,67991199,67991015,67990400,67988835,67966802,67956976,67955130,67954738,67941105,67939654,67936235,67932780,67925187,67923139 Gene ID= ENSG00000148634.15 TPM= 26.71 Transcript Type= protein_coding chr10 68282657 68332956 68282657 68332956 - transcript1294.chr10.nnic@PBLD transcript1294.chr10.nnic protein_coding 68332784,68306761,68296886,68296266,68292129,68292010,68288931,68288483,68285348,68282657 68332956,68306903,68296985,68296364,68292238,68292039,68289019,68288661,68285388,68284289 Gene ID= ENSG00000108187.15 TPM= 4.07 Transcript Type= NA chr10 68282660 68332927 68282660 68332927 - ENST00000358769.6@PBLD ENST00000358769.6 protein_coding 68332784,68306761,68296886,68296266,68292129,68292010,68288931,68288483,68285348,68282660 68332927,68306903,68296985,68296364,68292238,68292039,68289019,68288661,68285410,68284289 Gene ID= ENSG00000108187.15 TPM= 33.96 Transcript Type= protein_coding chr10 68332003 68343189 68332003 68343189 + transcript1300.chr10.nic@HNRNPH3 transcript1300.chr10.nic protein_coding 68332003,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978 68332235,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68343189 Gene ID= ENSG00000096746.17 TPM= 4.95 Transcript Type= NA chr10 68332061 68343400 68332061 68343400 + transcript1301.chr10.nic@HNRNPH3 transcript1301.chr10.nic protein_coding 68332061,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978 68332235,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343400 Gene ID= ENSG00000096746.17 TPM= 29.59 Transcript Type= NA chr10 68332061 68343189 68332061 68343189 + transcript1304.chr10.nic@HNRNPH3 transcript1304.chr10.nic protein_coding 68332061,68337199,68338503,68339140,68339440,68341174,68341585,68341759,68341978 68332216,68337333,68338642,68339226,68339555,68341309,68341680,68341851,68343189 Gene ID= ENSG00000096746.17 TPM= 3.15 Transcript Type= NA chr10 68332000 68343195 68332000 68343195 + transcript1306.chr10.nic@HNRNPH3 transcript1306.chr10.nic protein_coding 68332000,68337199,68338503,68339140,68339440,68341174,68341585,68341759,68341978 68332216,68337333,68338687,68339226,68339555,68341309,68341680,68341851,68343195 Gene ID= ENSG00000096746.17 TPM= 8.76 Transcript Type= NA chr10 68331174 68342273 68331174 68342273 + ENST00000469172.5@HNRNPH3 ENST00000469172.5 protein_coding 68331174,68337199,68339140,68339440,68341174,68341585,68341759,68341978 68332216,68338687,68339226,68339555,68341309,68341680,68341851,68342273 Gene ID= ENSG00000096746.17 TPM= 1.9 Transcript Type= processed_transcript chr10 68332075 68343187 68332075 68343187 + ENST00000265866.11@HNRNPH3 ENST00000265866.11 protein_coding 68332075,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978 68332216,68337333,68337996,68338687,68339226,68339555,68341309,68341680,68341851,68343187 Gene ID= ENSG00000096746.17 TPM= 68.52 Transcript Type= protein_coding chr10 68332122 68342272 68332122 68342272 + ENST00000354695.5@HNRNPH3 ENST00000354695.5 protein_coding 68332122,68337199,68337858,68338503,68339140,68339440,68341174,68341585,68341759,68341978 68332216,68337333,68337996,68338642,68339226,68339555,68341309,68341680,68341851,68342272 Gene ID= ENSG00000096746.17 TPM= 6.43 Transcript Type= protein_coding chr10 68478001 68527474 68478001 68527474 - ENST00000609923.5@SLC25A16 ENST00000609923.5 protein_coding 68527246,68516751,68506585,68503632,68493449,68493132,68488467,68487144,68478001 68527474,68516843,68506718,68503695,68493570,68493198,68488629,68487212,68483588 Gene ID= ENSG00000122912.14 TPM= 9.06 Transcript Type= protein_coding chr10 68721144 68792375 68721144 68792375 + ENST00000630771.2@CCAR1 ENST00000630771.2 protein_coding 68721144,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68757294,68761007,68765888,68771206,68772988,68786136,68786546,68787927,68788143,68789710,68791207 68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68757377,68761192,68766079,68771445,68773099,68786218,68786692,68788047,68788328,68789915,68792375 Gene ID= ENSG00000060339.13 TPM= 2.26 Transcript Type= protein_coding chr10 68721214 68792377 68721214 68792377 + ENST00000265872.10@CCAR1 ENST00000265872.10 protein_coding 68721214,68722455,68736876,68737845,68740629,68742376,68747161,68747374,68749136,68749524,68753852,68754714,68755370,68756273,68757294,68761007,68765888,68771206,68772988,68786136,68786546,68787927,68788143,68789710,68791207 68721282,68722577,68737048,68737889,68740661,68742569,68747275,68747566,68749265,68749685,68754077,68754827,68755536,68756483,68757377,68761192,68766079,68771445,68773099,68786218,68786692,68788047,68788328,68789915,68792377 Gene ID= ENSG00000060339.13 TPM= 21.28 Transcript Type= protein_coding chr10 68827541 68893060 68827541 68893060 + ENST00000298596.10@STOX1 ENST00000298596.10 protein_coding 68827541,68881958,68884260,68892589 68827933,68882110,68886618,68893060 Gene ID= ENSG00000165730.14 TPM= 7.24 Transcript Type= protein_coding chr10 68901278 68946847 68901278 68946847 + ENST00000373585.7@DDX50 ENST00000373585.7 protein_coding 68901278,68906711,68910307,68911068,68913162,68913391,68914059,68919832,68934199,68934799,68936006,68936936,68941060,68943213,68946352 68901471,68907007,68910382,68911246,68913279,68913576,68914204,68919981,68934360,68934918,68936079,68937095,68941194,68943257,68946847 Gene ID= ENSG00000107625.12 TPM= 38.94 Transcript Type= protein_coding chr10 68956128 68985073 68956128 68985073 + ENST00000354185.8@DDX21 ENST00000354185.8 protein_coding 68956128,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543 68956312,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985073 Gene ID= ENSG00000165732.12 TPM= 22.19 Transcript Type= protein_coding chr10 68956440 68985067 68956440 68985067 + ENST00000620315.1@DDX21 ENST00000620315.1 protein_coding 68956440,68959806,68962082,68963291,68965377,68967018,68968976,68970201,68971891,68973545,68974670,68977529,68978842,68981537,68982543 68956748,68960249,68962157,68963469,68965494,68967203,68969121,68970350,68972052,68973664,68974743,68977688,68978976,68981581,68985067 Gene ID= ENSG00000165732.12 TPM= 4.07 Transcript Type= protein_coding chr10 68988721 69016982 68988721 69016982 + ENST00000361983.6@KIF1BP ENST00000361983.6 protein_coding 68988721,69000424,69005046,69005732,69008841,69010900,69015541 68989258,69000522,69005125,69005915,69008925,69011015,69016982 Gene ID= ENSG00000198954.7 TPM= 77.88 Transcript Type= protein_coding chr10 68988750 69016929 68988750 69016929 + ENST00000638119.1@KIF1BP ENST00000638119.1 protein_coding 68988750,68995204,69000424,69005046,69005732,69008841,69010900,69015541 68989258,68995278,69000522,69005125,69005915,69008925,69011015,69016929 Gene ID= ENSG00000198954.7 TPM= 1.81 Transcript Type= protein_coding chr10 69088118 69104811 69088118 69104811 + ENST00000242465.3@SRGN ENST00000242465.3 protein_coding 69088118,69097084,69103871 69088236,69097231,69104811 Gene ID= ENSG00000122862.4 TPM= 35.32 Transcript Type= protein_coding chr10 69123512 69172861 69123512 69172861 + ENST00000373382.5@VPS26A ENST00000373382.5 protein_coding 69123512,69123660,69132898,69155812,69157007,69158047,69162406,69166042,69168489,69171156 69123546,69124280,69133047,69155887,69157163,69158211,69162512,69166110,69168631,69172861 Gene ID= ENSG00000122958.14 TPM= 102.33 Transcript Type= protein_coding chr10 69180201 69209104 69180201 69209104 + transcript1355.chr10.nic@SUPV3L1 transcript1355.chr10.nic protein_coding 69180201,69182520,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600 69180562,69182654,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209104 Gene ID= ENSG00000156502.13 TPM= 4.53 Transcript Type= NA chr10 69180232 69209098 69180232 69209098 + ENST00000359655.8@SUPV3L1 ENST00000359655.8 protein_coding 69180232,69185987,69186443,69187642,69189267,69191655,69195188,69196992,69198372,69199104,69200280,69202439,69202867,69207793,69208600 69180562,69186064,69186550,69187756,69189435,69191766,69195265,69197083,69198552,69199197,69200499,69202519,69203043,69207941,69209098 Gene ID= ENSG00000156502.13 TPM= 47.99 Transcript Type= protein_coding chr10 69180250 69193263 69180250 69193263 + ENST00000471069.5@SUPV3L1 ENST00000471069.5 protein_coding 69180250,69185987,69186443,69187642,69189267,69191655 69180562,69186064,69186550,69187756,69189435,69193263 Gene ID= ENSG00000156502.13 TPM= 1.81 Transcript Type= retained_intron chr10 69318844 69401882 69318844 69401882 + ENST00000359426.6@HK1 ENST00000359426.6 protein_coding 69318844,69343827,69359897,69364783,69368536,69369237,69369441,69376934,69379862,69382487,69384333,69384796,69386323,69389197,69392125,69394950,69398595,69400991 69319010,69343989,69360045,69364902,69368631,69369336,69369624,69377089,69380095,69382791,69384481,69384915,69386418,69389296,69392308,69395105,69398828,69401882 Gene ID= ENSG00000156515.21 TPM= 306.53 Transcript Type= protein_coding chr10 69451473 69507669 69451473 69507669 + ENST00000373290.6@TSPAN15 ENST00000373290.6 protein_coding 69451473,69483691,69485141,69495594,69498280,69504438,69506124,69506829 69451690,69483876,69485215,69495689,69498396,69504485,69506240,69507669 Gene ID= ENSG00000099282.9 TPM= 13.58 Transcript Type= protein_coding chr10 69630258 69633599 69630258 69633599 + ENST00000373279.5@C10orf35 ENST00000373279.5 protein_coding 69630258,69631480,69631709,69632790 69630313,69631547,69631839,69633599 Gene ID= ENSG00000171224.8 TPM= 2.72 Transcript Type= protein_coding chr10 69801898 69958923 69801898 69958923 + transcript1384.chr10.nic@COL13A1 transcript1384.chr10.nic protein_coding 69801898,69822369,69887457,69888304,69889414,69894552,69894675,69895550,69897475,69902748,69904933,69905787,69917289,69918285,69919062,69921882,69922708,69923802,69924963,69925804,69927087,69928937,69930043,69930400,69935350,69936756,69937635,69940988,69944125,69945671,69947307,69952882,69957004,69958699 69802717,69822438,69887491,69888330,69889440,69894578,69894701,69895576,69897531,69902855,69904959,69905822,69917333,69918317,69919088,69921935,69922794,69923855,69925007,69925872,69927110,69928999,69930087,69930552,69935391,69936782,69937715,69941023,69944178,69945724,69947342,69952968,69957042,69958923 Gene ID= ENSG00000197467.13 TPM= 1.81 Transcript Type= NA chr10 70052796 70112280 70052796 70112280 + ENST00000373255.8@H2AFY2 ENST00000373255.8 protein_coding 70052796,70075600,70090060,70091757,70093735,70095654,70100208,70109033,70111518 70053000,70075830,70090166,70091954,70093845,70095753,70100297,70109207,70112280 Gene ID= ENSG00000099284.13 TPM= 3.62 Transcript Type= protein_coding chr10 70110428 70132903 70110428 70132903 - transcript1385.chr10.nnic@AIFM2 transcript1385.chr10.nnic protein_coding 70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70114145,70110428 70132903,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329,70111919 Gene ID= ENSG00000042286.14 TPM= 3.92 Transcript Type= NA chr10 70112271 70132934 70112271 70132934 - ENST00000307864.2@AIFM2 ENST00000307864.2 protein_coding 70132734,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70112271 70132934,70124097,70123520,70121211,70120599,70117920,70116774,70115120,70114329 Gene ID= ENSG00000042286.14 TPM= 38.94 Transcript Type= protein_coding chr10 70112274 70132647 70112274 70132647 - transcript1388.chr10.nnic@AIFM2 transcript1388.chr10.nnic protein_coding 70132027,70123907,70123405,70121092,70120507,70117812,70116622,70114920,70112274 70132647,70124100,70123520,70121211,70120599,70117920,70116774,70115120,70114329 Gene ID= ENSG00000042286.14 TPM= 5.43 Transcript Type= NA chr10 70112274 70132903 70112274 70132903 - transcript1389.chr10.nnic@AIFM2 transcript1389.chr10.nnic protein_coding 70132734,70123907,70123405,70120507,70117812,70116622,70114920,70112274 70132903,70124097,70123520,70120599,70117920,70116774,70115120,70114329 Gene ID= ENSG00000042286.14 TPM= 3.32 Transcript Type= NA chr10 70137982 70146700 70137982 70146700 - transcript1397.chr10.nnic@TYSND1 transcript1397.chr10.nnic protein_coding 70145421,70143842,70142668,70137982 70146700,70143972,70142764,70140141 Gene ID= ENSG00000156521.13 TPM= 6.79 Transcript Type= NA chr10 70137982 70146659 70137982 70146659 - transcript1399.chr10.nnic@TYSND1 transcript1399.chr10.nnic protein_coding 70144485,70143842,70142668,70137982 70146659,70143972,70142853,70140141 Gene ID= ENSG00000156521.13 TPM= 2.72 Transcript Type= NA chr10 70137982 70146704 70137982 70146704 - transcript1401.chr10.nnic@TYSND1 transcript1401.chr10.nnic protein_coding 70145606,70143842,70142668,70137982 70146704,70143972,70142853,70140141 Gene ID= ENSG00000156521.13 TPM= 4.2 Transcript Type= NA chr10 70137983 70146676 70137983 70146676 - ENST00000479086.1@TYSND1 ENST00000479086.1 protein_coding 70146533,70143842,70142668,70137983 70146676,70143972,70142853,70140141 Gene ID= ENSG00000156521.13 TPM= 2.39 Transcript Type= processed_transcript chr10 70139213 70146700 70139213 70146700 - transcript1406.chr10.nnic@TYSND1 transcript1406.chr10.nnic protein_coding 70145421,70143842,70142765,70139213 70146700,70143972,70142853,70140141 Gene ID= ENSG00000156521.13 TPM= 3.75 Transcript Type= NA chr10 70137983 70146700 70137983 70146700 - transcript1410.chr10.nnic@TYSND1 transcript1410.chr10.nnic protein_coding 70145421,70143842,70137983 70146700,70143972,70140141 Gene ID= ENSG00000156521.13 TPM= 6.01 Transcript Type= NA chr10 70137981 70146656 70137981 70146656 - ENST00000335494.5@TYSND1 ENST00000335494.5 protein_coding 70145421,70137981 70146656,70140141 Gene ID= ENSG00000156521.13 TPM= 6.92 Transcript Type= protein_coding chr10 70137981 70146586 70137981 70146586 - ENST00000287078.6@TYSND1 ENST00000287078.6 protein_coding 70145421,70143842,70142668,70137981 70146586,70143972,70142853,70140141 Gene ID= ENSG00000156521.13 TPM= 25.81 Transcript Type= protein_coding chr10 70147289 70170523 70147289 70170523 - ENST00000373242.6@SAR1A ENST00000373242.6 protein_coding 70170413,70162690,70161858,70161619,70161004,70157764,70153838,70147289 70170523,70162759,70161931,70161738,70161069,70157867,70153969,70152592 Gene ID= ENSG00000079332.14 TPM= 1.81 Transcript Type= protein_coding chr10 70150204 70170523 70150204 70170523 - ENST00000373241.8@SAR1A ENST00000373241.8 protein_coding 70170413,70161858,70161619,70161004,70157764,70153838,70150204 70170523,70161931,70161738,70161069,70157867,70153969,70152592 Gene ID= ENSG00000079332.14 TPM= 67.92 Transcript Type= protein_coding chr10 70202830 70233427 70202830 70233427 - ENST00000373232.7@PPA1 ENST00000373232.7 protein_coding 70233264,70230341,70218764,70217812,70214500,70213463,70209558,70209205,70206264,70204873,70202830 70233427,70230399,70218817,70217931,70214586,70213589,70209685,70209290,70206333,70204915,70203186 Gene ID= ENSG00000180817.11 TPM= 130.4 Transcript Type= protein_coding chr10 70298970 70382650 70298970 70382650 - ENST00000395010.5@LRRC20 ENST00000395010.5 protein_coding 70382549,70340553,70323863,70298970 70382650,70340702,70324030,70301508 Gene ID= ENSG00000172731.13 TPM= 1.2 Transcript Type= protein_coding chr10 70298976 70382626 70298976 70382626 - ENST00000357631.6@LRRC20 ENST00000357631.6 protein_coding 70382549,70376452,70340553,70298976 70382626,70376596,70340702,70301508 Gene ID= ENSG00000172731.13 TPM= 1.2 Transcript Type= protein_coding chr10 70298973 70382589 70298973 70382589 - ENST00000373224.5@LRRC20 ENST00000373224.5 protein_coding 70382494,70376452,70340553,70323863,70298973 70382589,70376596,70340702,70324030,70301508 Gene ID= ENSG00000172731.13 TPM= 2.11 Transcript Type= protein_coding chr10 70404379 70428618 70404379 70428618 + ENST00000373218.4@EIF4EBP2 ENST00000373218.4 protein_coding 70404379,70419914,70421716 70404546,70420099,70428618 Gene ID= ENSG00000148730.6 TPM= 81.5 Transcript Type= protein_coding chr10 70478821 70568449 70478821 70568449 + ENST00000263563.6@PALD1 ENST00000263563.6 protein_coding 70478821,70525923,70529229,70529889,70531290,70532621,70532995,70533922,70534425,70534739,70537811,70538280,70538892,70539092,70539580,70541102,70541463,70547306,70564364,70566581 70479059,70526136,70529331,70530068,70531454,70532781,70533070,70534073,70534524,70534843,70537906,70538408,70539008,70539247,70539762,70541242,70541534,70547446,70564519,70568449 Gene ID= ENSG00000107719.8 TPM= 9.06 Transcript Type= protein_coding chr10 70597349 70602775 70597349 70602775 - ENST00000441259.1@PRF1 ENST00000441259.1 protein_coding 70602645,70600364,70597349 70602775,70600932,70599181 Gene ID= ENSG00000180644.7 TPM= 1.36 Transcript Type= protein_coding chr10 70597348 70602759 70597348 70602759 - ENST00000373209.2@PRF1 ENST00000373209.2 protein_coding 70602645,70600364,70597348 70602759,70600906,70599181 Gene ID= ENSG00000180644.7 TPM= 3.17 Transcript Type= protein_coding chr10 70815970 70881173 70815970 70881173 + ENST00000373202.7@SGPL1 ENST00000373202.7 protein_coding 70815970,70816811,70844473,70851143,70854708,70857614,70859371,70868345,70869792,70871048,70871837,70873351,70875402,70876541,70877195 70816126,70816880,70844638,70851210,70854855,70857690,70859499,70868433,70869897,70871146,70871986,70873589,70875548,70876661,70881173 Gene ID= ENSG00000166224.16 TPM= 30.79 Transcript Type= protein_coding chr10 70882284 70888613 70882284 70888613 - transcript1438.chr10.nic@PCBD1 transcript1438.chr10.nic protein_coding 70888531,70885798,70885152,70882284 70888613,70885929,70885232,70882485 Gene ID= ENSG00000166228.8 TPM= 3.62 Transcript Type= NA chr10 70883510 70888784 70883510 70888784 - ENST00000299299.3@PCBD1 ENST00000299299.3 protein_coding 70888531,70885798,70885152,70883510 70888784,70885929,70885232,70884048 Gene ID= ENSG00000166228.8 TPM= 128.59 Transcript Type= protein_coding chr10 71319258 71363385 71319258 71363385 + ENST00000373189.5@SLC29A3 ENST00000373189.5 protein_coding 71319258,71322756,71344209,71351562,71356081,71361954 71319310,71323054,71344291,71351788,71356243,71363385 Gene ID= ENSG00000198246.7 TPM= 7.24 Transcript Type= protein_coding chr10 71396926 71716870 71396926 71716870 + transcript1448.chr10.nic@CDH23 transcript1448.chr10.nic protein_coding 71396926,71439827,71446318,71510082,71510954,71511120,71566742,71570790,71577914,71615504,71617205,71643861,71645831,71646459,71675112,71677456,71679387,71682445,71687647,71690468,71694147,71695418,71702022,71702549,71704911,71706897,71709098,71712665,71715202 71397318,71439898,71446395,71510224,71511001,71511212,71566936,71570918,71577992,71615616,71617393,71643866,71645980,71646617,71675176,71677693,71679492,71682572,71687719,71690584,71694259,71695525,71702211,71702694,71705130,71707049,71709211,71712817,71716870 Gene ID= ENSG00000107736.19 TPM= 1.81 Transcript Type= NA chr10 71747559 71773498 71747559 71773498 - ENST00000394957.7@VSIR ENST00000394957.7 protein_coding 71773358,71761598,71760868,71755359,71752975,71751668,71747559 71773498,71762026,71760924,71755466,71753002,71751861,71751290 Gene ID= ENSG00000107738.19 TPM= 86.03 Transcript Type= protein_coding chr10 71816298 71851375 71816298 71851375 - ENST00000394936.7@PSAP ENST00000394936.7 protein_coding 71851182,71834372,71831846,71831126,71828877,71828014,71825837,71821876,71820240,71819714,71819465,71819031,71818617,71816298 71851375,71834505,71831920,71831251,71829077,71828157,71825893,71822007,71820335,71819900,71819622,71819111,71818724,71817476 Gene ID= ENSG00000197746.13 TPM= 3942.68 Transcript Type= protein_coding chr10 71964365 72013564 71964365 72013564 + ENST00000373115.4@CHST3 ENST00000373115.4 protein_coding 71964365,72005736,72007172 71964694,72005982,72013564 Gene ID= ENSG00000122863.5 TPM= 28.07 Transcript Type= protein_coding chr10 72062406 72088526 72062406 72088526 - ENST00000536168.2@SPOCK2 ENST00000536168.2 protein_coding 72088136,72072503,72072144,72070312,72068187,72067613,72066902,72064178,72063025,72062406 72088526,72072550,72072258,72070426,72068301,72067732,72067120,72064240,72063162,72062905 Gene ID= ENSG00000107742.12 TPM= 29.88 Transcript Type= protein_coding chr10 72096021 72216277 72096021 72216277 - transcript1508.chr10.nic@ASCC1 transcript1508.chr10.nic protein_coding 72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72102850,72102334,72096021 72216277,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72102967,72102412,72097450 Gene ID= ENSG00000138303.17 TPM= 1.99 Transcript Type= NA chr10 72096522 72216284 72096522 72216284 - transcript1511.chr10.nic@ASCC1 transcript1511.chr10.nic protein_coding 72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72102850,72096522 72216284,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72102967,72097450 Gene ID= ENSG00000138303.17 TPM= 2.9 Transcript Type= NA chr10 72096032 72216285 72096032 72216285 - transcript1513.chr10.nic@ASCC1 transcript1513.chr10.nic protein_coding 72215782,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096032 72216285,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450 Gene ID= ENSG00000138303.17 TPM= 8.33 Transcript Type= NA chr10 72096522 72216292 72096522 72216292 - transcript1517.chr10.nnic@ASCC1 transcript1517.chr10.nnic protein_coding 72216207,72213187,72203427,72196811,72161538,72152869,72133057,72128082,72096522 72216292,72213331,72203524,72196989,72161674,72152988,72133181,72128167,72097450 Gene ID= ENSG00000138303.17 TPM= 1.99 Transcript Type= NA chr10 72096521 72216288 72096521 72216288 - ENST00000317168.10@ASCC1 ENST00000317168.10 protein_coding 72216207,72213187,72210732,72203427,72196811,72161538,72152869,72133057,72128082,72096521 72216288,72213331,72210831,72203524,72196989,72161674,72152988,72133181,72128167,72097450 Gene ID= ENSG00000138303.17 TPM= 27.35 Transcript Type= protein_coding chr10 72215987 72235450 72215987 72235450 + transcript1523.chr10.nnic@ANAPC16 transcript1523.chr10.nnic protein_coding 72215987,72220054,72223888,72230366,72233001 72216072,72220379,72224056,72230440,72235450 Gene ID= ENSG00000166295.8 TPM= 8.98 Transcript Type= NA chr10 72216000 72235858 72216000 72235858 + ENST00000621663.4@ANAPC16 ENST00000621663.4 protein_coding 72216000,72220054,72223888,72230366,72233001 72216138,72220379,72224056,72230440,72235858 Gene ID= ENSG00000166295.8 TPM= 42.04 Transcript Type= protein_coding chr10 72215982 72235450 72215982 72235450 + transcript1528.chr10.nic@ANAPC16 transcript1528.chr10.nic protein_coding 72215982,72223888,72230366,72233001 72216072,72224056,72230440,72235450 Gene ID= ENSG00000166295.8 TPM= 46.11 Transcript Type= NA chr10 72215996 72235862 72215996 72235862 + transcript1533.chr10.nnic@ANAPC16 transcript1533.chr10.nnic protein_coding 72215996,72220054,72230366,72233001 72216138,72220379,72230440,72235862 Gene ID= ENSG00000166295.8 TPM= 16.45 Transcript Type= NA chr10 72216017 72235862 72216017 72235862 + transcript1537.chr10.nnic@ANAPC16 transcript1537.chr10.nnic protein_coding 72216017,72230366,72233001 72216138,72230440,72235862 Gene ID= ENSG00000166295.8 TPM= 32.3 Transcript Type= NA chr10 72216048 72235860 72216048 72235860 + ENST00000299381.4@ANAPC16 ENST00000299381.4 protein_coding 72216048,72223888,72230366,72233001 72216138,72224056,72230440,72235860 Gene ID= ENSG00000166295.8 TPM= 76.9 Transcript Type= protein_coding chr10 72273920 72276036 72273920 72276036 + ENST00000307365.3@DDIT4 ENST00000307365.3 protein_coding 72273920,72274157,72274695 72274060,72274421,72276036 Gene ID= ENSG00000168209.4 TPM= 1901.65 Transcript Type= protein_coding chr10 72332830 72355149 72332830 72355149 - ENST00000394903.6@DNAJB12 ENST00000394903.6 protein_coding 72354765,72344950,72343366,72340985,72340789,72338202,72336524,72335780,72332830 72355149,72345127,72343511,72341170,72340868,72338311,72336696,72335931,72334617 Gene ID= ENSG00000148719.14 TPM= 69.5 Transcript Type= protein_coding chr10 72332836 72354982 72332836 72354982 - transcript1555.chr10.nic@DNAJB12 transcript1555.chr10.nic protein_coding 72354765,72344950,72343366,72340985,72340789,72338202,72336524,72335834,72332836 72354982,72345127,72343511,72341170,72340868,72338311,72336696,72335931,72334617 Gene ID= ENSG00000148719.14 TPM= 36.45 Transcript Type= NA chr10 72332830 72355149 72332830 72355149 - ENST00000338820.7@DNAJB12 ENST00000338820.7 protein_coding 72354765,72344950,72343366,72340985,72340789,72338202,72336524,72332830 72355149,72345127,72343511,72341170,72340868,72338311,72336696,72335931 Gene ID= ENSG00000148719.14 TPM= 30.11 Transcript Type= protein_coding chr10 72367327 72626191 72367327 72626191 - ENST00000398761.8@MICU1 ENST00000398761.8 protein_coding 72626010,72566633,72562895,72551179,72533742,72508155,72477174,72475100,72423234,72407929,72375783,72367327 72626191,72566794,72563063,72551341,72533789,72508271,72477256,72475297,72423371,72408037,72375872,72368355 Gene ID= ENSG00000107745.18 TPM= 132.21 Transcript Type= protein_coding chr10 72367340 72626105 72367340 72626105 - ENST00000361114.9@MICU1 ENST00000361114.9 protein_coding 72626010,72566633,72562895,72551179,72533746,72508155,72477174,72475100,72423234,72407929,72375783,72367340 72626105,72566794,72563063,72551341,72533789,72508269,72477256,72475297,72423371,72408037,72375872,72368355 Gene ID= ENSG00000107745.18 TPM= 115 Transcript Type= protein_coding chr10 72692131 72887694 72692131 72887694 + ENST00000373053.7@MCU ENST00000373053.7 protein_coding 72692131,72834359,72859177,72860423,72868703,72871377,72884266,72885745 72692301,72834428,72859347,72860527,72868863,72871580,72884382,72887694 Gene ID= ENSG00000156026.14 TPM= 8.15 Transcript Type= protein_coding chr10 73007224 73096974 73007224 73096974 - ENST00000263556.3@P4HA1 ENST00000263556.3 protein_coding 73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030271,73016846,73014224,73010969,73009807,73007224 73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016899,73014289,73011037,73009903,73008292 Gene ID= ENSG00000122884.12 TPM= 52.97 Transcript Type= protein_coding chr10 73007217 73096850 73007217 73096850 - ENST00000307116.6@P4HA1 ENST00000307116.6 protein_coding 73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030267,73016846,73014224,73010969,73009807,73007217 73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016895,73014289,73011037,73009903,73008292 Gene ID= ENSG00000122884.12 TPM= 20.37 Transcript Type= protein_coding chr10 73007224 73096974 73007224 73096974 - ENST00000394890.6@P4HA1 ENST00000394890.6 protein_coding 73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73044981,73030271,73016846,73014224,73010969,73009807,73007224 73096974,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73045051,73030370,73016899,73014289,73011037,73009903,73008292 Gene ID= ENSG00000122884.12 TPM= 36.67 Transcript Type= protein_coding chr10 73007217 73096850 73007217 73096850 - ENST00000373008.6@P4HA1 ENST00000373008.6 protein_coding 73096766,73074808,73073731,73072029,73068846,73053351,73051053,73046925,73043887,73030267,73016846,73014224,73010969,73009807,73007217 73096850,73074915,73073827,73072180,73068983,73053590,73051249,73047101,73043957,73030370,73016895,73014289,73011037,73009903,73008292 Gene ID= ENSG00000122884.12 TPM= 16.75 Transcript Type= protein_coding chr10 73133656 73168059 73133656 73168059 - ENST00000372979.8@ECD ENST00000372979.8 protein_coding 73167866,73163733,73160434,73156568,73156275,73154256,73152293,73148276,73146276,73139631,73139309,73138003,73136704,73133656 73168059,73163950,73160551,73156655,73156453,73154448,73152421,73148404,73146361,73139737,73139495,73138070,73136918,73134813 Gene ID= ENSG00000122882.10 TPM= 35.32 Transcript Type= protein_coding chr10 73168114 73242192 73168114 73242192 + transcript1592.chr10.nic@FAM149B1 transcript1592.chr10.nic protein_coding 73168114,73174687,73177846,73192556,73193477,73208619,73210251,73228060,73230422,73232939,73234817,73235193,73239312,73240946 73168386,73174791,73177975,73192698,73193593,73208786,73210438,73228160,73230525,73233163,73234940,73235318,73239384,73242192 Gene ID= ENSG00000138286.14 TPM= 1.81 Transcript Type= NA chr10 73168114 73235481 73168114 73235481 + transcript1600.chr10.nic@FAM149B1 transcript1600.chr10.nic protein_coding 73168114,73174687,73177846,73192556,73193477,73208619,73210251,73228060,73230422,73232939,73234817,73235193 73168386,73174791,73177975,73192698,73193593,73208786,73210438,73228184,73230525,73233163,73234940,73235481 Gene ID= ENSG00000138286.14 TPM= 1.81 Transcript Type= NA chr10 73241959 73247286 73241959 73247286 - transcript1605.chr10.nnic@DNAJC9 transcript1605.chr10.nnic protein_coding 73247010,73246688,73245922,73243843,73241959 73247286,73246799,73246176,73243929,73243519 Gene ID= ENSG00000213551.4 TPM= 4.53 Transcript Type= NA chr10 73248766 73252437 73248766 73252437 - transcript1609.chr10.nnic@MRPS16 transcript1609.chr10.nnic protein_coding 73252224,73251763,73248766 73252437,73252023,73250991 Gene ID= ENSG00000182180.13 TPM= 7.85 Transcript Type= NA chr10 73248843 73252693 73248843 73252693 - ENST00000372945.7@MRPS16 ENST00000372945.7 protein_coding 73252470,73251763,73248843 73252693,73252023,73250991 Gene ID= ENSG00000182180.13 TPM= 110.18 Transcript Type= protein_coding chr10 73248843 73252625 73248843 73252625 - ENST00000479005.1@MRPS16 ENST00000479005.1 protein_coding 73252470,73251763,73248843 73252625,73252037,73250991 Gene ID= ENSG00000182180.13 TPM= 9.66 Transcript Type= processed_transcript chr10 73253766 73358756 73253766 73358756 - transcript1616.chr10.nnic@CFAP70 transcript1616.chr10.nnic protein_coding 73358714,73353556,73348423,73345065,73341399,73335430,73331177,73322963,73312473,73311834,73310158,73299601,73298907,73297042,73293263,73291881,73291640,73291226,73278179,73277240,73275446,73274433,73272928,73269614,73256369,73253766 73358756,73353742,73348521,73345244,73341581,73335524,73331276,73323097,73312643,73311914,73310249,73299665,73299097,73297173,73293388,73292014,73291755,73291444,73278337,73277361,73275598,73274594,73273017,73269715,73256416,73254055 Gene ID= ENSG00000156042.17 TPM= 1.81 Transcript Type= NA chr10 73290073 73358770 73290073 73358770 - transcript1618.chr10.nic@CFAP70 transcript1618.chr10.nic protein_coding 73358714,73354734,73353556,73348423,73348156,73345065,73341399,73335430,73331177,73322963,73312473,73311834,73310158,73299601,73298907,73297042,73293263,73291881,73291640,73290073 73358770,73354835,73353742,73348521,73348235,73345244,73341581,73335524,73331276,73323097,73312643,73311914,73310249,73299665,73299097,73297173,73293388,73292014,73291755,73291444 Gene ID= ENSG00000156042.17 TPM= 2.72 Transcript Type= NA chr10 73375436 73414080 73375436 73414080 - transcript1625.chr10.nic@ANXA7 transcript1625.chr10.nic protein_coding 73414012,73398181,73397164,73396519,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375436 73414080,73398385,73397274,73396583,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217 Gene ID= ENSG00000138279.15 TPM= 22.03 Transcript Type= NA chr10 73375101 73414067 73375101 73414067 - ENST00000372921.9@ANXA7 ENST00000372921.9 protein_coding 73414012,73400803,73398181,73397164,73396519,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375101 73414067,73400857,73398385,73397274,73396583,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217 Gene ID= ENSG00000138279.15 TPM= 365.23 Transcript Type= protein_coding chr10 73375445 73414067 73375445 73414067 - ENST00000372919.8@ANXA7 ENST00000372919.8 protein_coding 73414012,73400803,73398181,73397164,73396519,73396044,73388312,73387689,73383577,73383175,73380031,73379879,73378911,73375445 73414067,73400857,73398385,73397274,73396583,73396109,73388414,73387783,73383690,73383345,73380201,73379954,73379023,73376217 Gene ID= ENSG00000138279.15 TPM= 2.11 Transcript Type= protein_coding chr10 73436806 73495631 73436806 73495631 - transcript1631.chr10.nnic@PPP3CB transcript1631.chr10.nnic protein_coding 73495286,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436806 73495631,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73439901,73438420 Gene ID= ENSG00000107758.15 TPM= 3.62 Transcript Type= NA chr10 73436806 73496024 73436806 73496024 - ENST00000394829.6@PPP3CB ENST00000394829.6 protein_coding 73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73444725,73439872,73436806 73496024,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822,73439901,73438420 Gene ID= ENSG00000107758.15 TPM= 5.43 Transcript Type= protein_coding chr10 73443790 73495642 73443790 73495642 - transcript1635.chr10.nnic@PPP3CB transcript1635.chr10.nnic protein_coding 73495558,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73443790 73495642,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446576,73444822 Gene ID= ENSG00000107758.15 TPM= 1.81 Transcript Type= NA chr10 73443780 73495996 73443780 73495996 - ENST00000342558.3@PPP3CB ENST00000342558.3 protein_coding 73495805,73479317,73478499,73474919,73471468,73471070,73470887,73470687,73467553,73454412,73446492,73443780 73495996,73479517,73478623,73475030,73471613,73471209,73470964,73470781,73467678,73454489,73446573,73444822 Gene ID= ENSG00000107758.15 TPM= 3.62 Transcript Type= protein_coding chr10 73495719 73507302 73495719 73507302 + transcript1637.chr10.nic@PPP3CB-AS1 transcript1637.chr10.nic processed_transcript 73495719,73496142,73498733,73499595,73504184,73504805 73495817,73496906,73498867,73499687,73504272,73507302 Gene ID= ENSG00000221817.9 TPM= 4.53 Transcript Type= NA chr10 73744372 73772178 73744372 73772178 + transcript1648.chr10.nic@SEC24C transcript1648.chr10.nic protein_coding 73744372,73746805,73751108,73759622,73760018,73760713,73762098,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955 73744437,73747004,73751243,73759794,73760386,73760849,73762166,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772178 Gene ID= ENSG00000176986.15 TPM= 33.87 Transcript Type= NA chr10 73744384 73772161 73744384 73772161 + ENST00000345254.8@SEC24C ENST00000345254.8 protein_coding 73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955 73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161 Gene ID= ENSG00000176986.15 TPM= 139.82 Transcript Type= protein_coding chr10 73744391 73772161 73744391 73772161 + ENST00000339365.2@SEC24C ENST00000339365.2 protein_coding 73744391,73746630,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770709,73770955 73744437,73746716,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770471,73770798,73772161 Gene ID= ENSG00000176986.15 TPM= 41.11 Transcript Type= protein_coding chr10 73744384 73772159 73744384 73772159 + ENST00000465076.5@SEC24C ENST00000465076.5 protein_coding 73744384,73746805,73751108,73759622,73760018,73760713,73763490,73763856,73765451,73765800,73766086,73766350,73766760,73767054,73767837,73768810,73769007,73769347,73769615,73769836,73770280,73770955 73744437,73747004,73751243,73759794,73760386,73760849,73763601,73763983,73765589,73765915,73766210,73766541,73766853,73767170,73768007,73768906,73769152,73769485,73769733,73770015,73770798,73772159 Gene ID= ENSG00000176986.15 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr10 73772291 73776219 73772291 73776219 + ENST00000372841.7@FUT11 ENST00000372841.7 protein_coding 73772291,73773190,73775541 73773041,73773815,73776219 Gene ID= ENSG00000196968.10 TPM= 7.24 Transcript Type= protein_coding chr10 73782063 73783652 73782063 73783652 + ENST00000372833.5@CHCHD1 ENST00000372833.5 protein_coding 73782063,73782323,73783074 73782199,73782441,73783652 Gene ID= ENSG00000172586.7 TPM= 50.71 Transcript Type= protein_coding chr10 73785582 73801792 73785582 73801792 + ENST00000604729.5@ZSWIM8 ENST00000604729.5 protein_coding 73785582,73788670,73789096,73789367,73789717,73789956,73790172,73790975,73791324,73791859,73793588,73793865,73794147,73794541,73795539,73796774,73797113,73797377,73797781,73798230,73799002,73800011,73800296,73800640,73801017,73801316 73786086,73788823,73789190,73789539,73789824,73790037,73790292,73791176,73791499,73792852,73793719,73794044,73794330,73794639,73795663,73797014,73797271,73797605,73798070,73798453,73799490,73800170,73800472,73800759,73801195,73801792 Gene ID= ENSG00000214655.10 TPM= 24 Transcript Type= protein_coding chr10 73785624 73801797 73785624 73801797 + ENST00000398706.6@ZSWIM8 ENST00000398706.6 protein_coding 73785624,73788670,73789096,73789367,73789717,73789956,73790172,73790975,73791324,73791859,73793588,73793865,73794147,73794541,73795539,73796774,73797113,73797377,73797781,73798230,73799002,73800011,73800296,73800640,73801017,73801316 73786086,73788823,73789190,73789539,73789824,73790037,73790292,73791176,73791499,73792852,73793719,73794044,73794330,73794639,73795663,73797014,73797271,73797605,73798070,73798453,73799490,73800194,73800472,73800759,73801195,73801797 Gene ID= ENSG00000214655.10 TPM= 14.94 Transcript Type= protein_coding chr10 73801911 73811809 73801911 73811809 - transcript1696.chr10.nic@NDST2 transcript1696.chr10.nic protein_coding 73811474,73810799,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73803009,73802674,73801911 73811809,73810903,73808729,73807195,73806811,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576 Gene ID= ENSG00000166507.17 TPM= 3.17 Transcript Type= NA chr10 73801911 73811584 73801911 73811584 - ENST00000309979.10@NDST2 ENST00000309979.10 protein_coding 73811474,73810799,73807384,73807108,73806657,73806289,73805900,73805587,73804773,73803893,73803574,73803189,73802972,73802674,73801911 73811584,73810903,73808729,73807195,73806811,73806474,73806028,73805769,73804869,73804016,73803748,73803359,73803081,73802776,73802576 Gene ID= ENSG00000166507.17 TPM= 19.47 Transcript Type= protein_coding chr10 73810684 73811798 73810684 73811798 - ENST00000398701.2@NDST2 ENST00000398701.2 protein_coding 73811474,73810684 73811798,73810903 Gene ID= ENSG00000166507.17 TPM= 5.43 Transcript Type= processed_transcript chr10 73812501 73874591 73812501 73874591 - ENST00000322680.7@CAMK2G ENST00000322680.7 protein_coding 73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73819532,73817479,73817023,73815003,73812501 73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73819645,73817554,73817117,73815247,73814505 Gene ID= ENSG00000148660.20 TPM= 5.21 Transcript Type= protein_coding chr10 73812501 73874591 73812501 73874591 - ENST00000394762.6@CAMK2G ENST00000394762.6 protein_coding 73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73839539,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73812501 73874591,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73839601,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505 Gene ID= ENSG00000148660.20 TPM= 1.58 Transcript Type= protein_coding chr10 73812501 73874582 73812501 73874582 - transcript1703.chr10.nic@CAMK2G transcript1703.chr10.nic protein_coding 73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73825279,73824040,73821682,73817479,73817023,73815003,73812501 73874582,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73825347,73824084,73821730,73817554,73817117,73815247,73814505 Gene ID= ENSG00000148660.20 TPM= 5.21 Transcript Type= NA chr10 73812501 73874519 73812501 73874519 - ENST00000351293.7@CAMK2G ENST00000351293.7 protein_coding 73874397,73872989,73860830,73853192,73852254,73849261,73849013,73848526,73847988,73847225,73842458,73842169,73837468,73824040,73821682,73817479,73817023,73815003,73812501 73874519,73873083,73860889,73853246,73852319,73849333,73849115,73848609,73848082,73847347,73842541,73842211,73837511,73824084,73821730,73817554,73817117,73815247,73814505 Gene ID= ENSG00000148660.20 TPM= 4.3 Transcript Type= protein_coding chr10 73911157 73917497 73911157 73917497 + ENST00000372764.3@PLAU ENST00000372764.3 protein_coding 73911157,73911525,73912041,73912215,73912924,73913290,73913539,73913980,73914776,73915251,73916389 73911218,73911612,73912068,73912322,73913098,73913381,73913758,73914128,73914916,73915399,73917497 Gene ID= ENSG00000122861.15 TPM= 10.87 Transcript Type= protein_coding chr10 73998114 74120160 73998114 74120160 + ENST00000211998.9@VCL ENST00000211998.9 protein_coding 73998114,74043083,74070670,74070975,74072730,74074743,74082454,74083366,74089196,74090023,74094271,74095656,74097204,74100948,74103820,74105051,74107230,74108971,74111909,74114184,74114795,74118023 73998375,74043153,74070820,74071083,74072852,74074903,74082544,74083513,74089349,74090198,74094461,74095855,74097332,74101097,74103928,74105353,74107354,74109156,74112112,74114387,74114899,74120160 Gene ID= ENSG00000035403.17 TPM= 18.11 Transcript Type= protein_coding chr10 74121768 74150826 74121768 74150826 - transcript1715.chr10.nnic@AP3M1 transcript1715.chr10.nnic protein_coding 74150755,74138806,74138107,74136632,74134027,74129907,74129108,74126126,74124380,74121768 74150826,74138931,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910 Gene ID= ENSG00000185009.12 TPM= 2.72 Transcript Type= NA chr10 74120255 74151063 74120255 74151063 - ENST00000355264.8@AP3M1 ENST00000355264.8 protein_coding 74150755,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74120255 74151063,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910 Gene ID= ENSG00000185009.12 TPM= 29.88 Transcript Type= protein_coding chr10 74122964 74150842 74122964 74150842 - ENST00000372745.1@AP3M1 ENST00000372745.1 protein_coding 74150755,74138806,74138107,74136632,74134027,74129907,74129108,74126148,74124380,74122964 74150842,74138931,74138382,74136803,74134164,74129992,74129241,74126355,74124524,74123910 Gene ID= ENSG00000185009.12 TPM= 1.81 Transcript Type= protein_coding chr10 75022100 75032620 75022100 75032620 + transcript1728.chr10.nic@KAT6B transcript1728.chr10.nic protein_coding 75022100,75024958,75028489 75022231,75025249,75032620 Gene ID= ENSG00000156650.12 TPM= 2.72 Transcript Type= NA chr10 75210751 75231448 75210751 75231448 + ENST00000332211.10@VDAC2 ENST00000332211.10 protein_coding 75210751,75211134,75212230,75214021,75219063,75219304,75220743,75222252,75229644,75230898 75210938,75211189,75212298,75214070,75219215,75219356,75220970,75222402,75229701,75231448 Gene ID= ENSG00000165637.13 TPM= 249.63 Transcript Type= protein_coding chr10 75233970 75235954 75233970 75235954 - transcript1744.chr10.nic@COMTD1 transcript1744.chr10.nic protein_coding 75235616,75235267,75235060,75234938,75234610,75233970 75235954,75235372,75235178,75234992,75234743,75234225 Gene ID= ENSG00000165644.10 TPM= 2.11 Transcript Type= NA chr10 75233970 75236037 75233970 75236037 - transcript1748.chr10.nnic@COMTD1 transcript1748.chr10.nnic protein_coding 75235835,75235060,75234938,75234610,75233970 75236037,75235178,75234992,75234743,75234225 Gene ID= ENSG00000165644.10 TPM= 3.02 Transcript Type= NA chr10 75233969 75236011 75233969 75236011 - ENST00000372538.7@COMTD1 ENST00000372538.7 protein_coding 75235835,75235616,75235267,75235060,75234938,75234610,75233969 75236011,75235743,75235372,75235178,75234992,75234743,75234225 Gene ID= ENSG00000165644.10 TPM= 24.75 Transcript Type= protein_coding chr10 75397830 75401906 75397830 75401906 - ENST00000372524.4@ZNF503 ENST00000372524.4 protein_coding 75401105,75397830 75401906,75400374 Gene ID= ENSG00000165655.16 TPM= 143.98 Transcript Type= protein_coding chr10 76036006 76058789 76036006 76058789 + ENST00000611306.1@LRMDA ENST00000611306.1 protein_coding 76036006,76047164,76058666 76036134,76047303,76058789 Gene ID= ENSG00000148655.14 TPM= 58.86 Transcript Type= protein_coding chr10 77636225 77638670 77636225 77638670 - transcript1769.chr10.nnic@KCNMA1 transcript1769.chr10.nnic protein_coding 77637265,77636894,77636225 77638670,77637006,77636569 Gene ID= ENSG00000156113.22 TPM= 1.81 Transcript Type= NA chr10 77790780 77926775 77790780 77926775 - transcript1774.chr10.nnic@DLG5 transcript1774.chr10.nnic protein_coding 77926217,77869129,77856730,77854227,77853354,77843447,77841881,77835738,77833914,77830741,77830217,77829355,77828882,77824384,77821082,77819895,77819321,77817777,77817007,77816551,77812215,77811924,77811094,77809547,77807796,77806758,77805665,77796451,77796061,77794849,77794008,77790780 77926775,77869197,77856892,77854358,77853537,77843706,77842193,77835922,77834039,77830873,77830344,77829530,77828985,77824476,77822101,77820018,77819465,77817889,77817096,77816701,77812377,77812057,77811234,77809730,77807944,77806928,77805861,77796594,77796188,77794958,77794117,77792543 Gene ID= ENSG00000151208.16 TPM= 62.48 Transcript Type= NA chr10 77816030 77926742 77816030 77926742 - transcript1780.chr10.nic@DLG5 transcript1780.chr10.nic protein_coding 77926217,77869129,77856730,77854227,77853354,77843447,77841881,77835738,77833914,77830741,77830217,77829355,77828882,77824384,77821082,77819895,77819321,77817777,77817007,77816551,77816030 77926742,77869197,77856892,77854370,77853537,77843706,77842193,77835922,77834039,77830873,77830344,77829530,77828985,77824476,77822101,77820018,77819465,77817889,77817096,77816701,77816175 Gene ID= ENSG00000151208.16 TPM= 2.72 Transcript Type= NA chr10 77975149 78029545 77975149 78029545 - ENST00000372371.7@POLR3A ENST00000372371.7 protein_coding 78029364,78026094,78025622,78024971,78024549,78022145,78021860,78021546,78019162,78017575,78013650,78010471,78009864,78009537,78007702,78004716,78002197,78000976,77999981,77993197,77991054,77986073,77985903,77985170,77984205,77983920,77982653,77982154,77981428,77980141,77975149 78029545,78026229,78025759,78025142,78024703,78022384,78022022,78021682,78019265,78017716,78013790,78010540,78009991,78009675,78007866,78004888,78002308,78001094,78000118,77993367,77991167,77986159,77985985,77985340,77984298,77984012,77982817,77982318,77981559,77980273,77977626 Gene ID= ENSG00000148606.12 TPM= 11.77 Transcript Type= protein_coding chr10 78033760 78040713 78033760 78040713 + ENST00000435275.5@RPS24 ENST00000435275.5 protein_coding 78033760,78035352,78035511,78037194,78040201,78040615 78033904,78035417,78035720,78037304,78040225,78040713 Gene ID= ENSG00000138326.18 TPM= 1.54 Transcript Type= protein_coding chr10 78033844 78040670 78033844 78040670 + ENST00000485708.6@RPS24 ENST00000485708.6 protein_coding 78033844,78035352,78035511,78037194,78037965,78040204,78040615 78033904,78035417,78035720,78037304,78037982,78040225,78040670 Gene ID= ENSG00000138326.18 TPM= 1.54 Transcript Type= processed_transcript chr10 78033865 78040697 78033865 78040697 + ENST00000372360.7@RPS24 ENST00000372360.7 protein_coding 78033865,78035352,78035511,78037194,78040615 78033904,78035417,78035720,78037304,78040697 Gene ID= ENSG00000138326.18 TPM= 2.9 Transcript Type= protein_coding chr10 78033883 78040697 78033883 78040697 + ENST00000360830.8@RPS24 ENST00000360830.8 protein_coding 78033883,78035352,78035511,78037194,78040204,78040615 78033904,78035417,78035720,78037304,78040225,78040697 Gene ID= ENSG00000138326.18 TPM= 91.64 Transcript Type= protein_coding chr10 78943979 78977948 78943979 78977948 - transcript1796.chr10.nnic@ZMIZ1-AS1 transcript1796.chr10.nnic antisense_RNA 78977859,78952310,78945912,78943979 78977948,78952389,78945989,78944747 Gene ID= ENSG00000224596.7 TPM= 1.81 Transcript Type= NA chr10 78943330 78977958 78943330 78977958 - transcript1797.chr10.nnic@ZMIZ1-AS1 transcript1797.chr10.nnic antisense_RNA 78977859,78945912,78943330 78977958,78945989,78944747 Gene ID= ENSG00000224596.7 TPM= 2.72 Transcript Type= NA chr10 78943330 79003834 78943330 79003834 - transcript1798.chr10.nnic@ZMIZ1-AS1 transcript1798.chr10.nnic antisense_RNA 79003539,78945912,78943330 79003834,78945989,78944747 Gene ID= ENSG00000224596.7 TPM= 1.81 Transcript Type= NA chr10 79068933 79202187 79068933 79202187 + transcript1800.chr10.nic@ZMIZ1 transcript1800.chr10.nic protein_coding 79068933,79118915,79139682,79162053,79201584 79069270,79119024,79139777,79162133,79202187 Gene ID= ENSG00000108175.16 TPM= 1.81 Transcript Type= NA chr10 79069035 79316519 79069035 79316519 + ENST00000334512.9@ZMIZ1 ENST00000334512.9 protein_coding 79069035,79118915,79139682,79162053,79201584,79208336,79216169,79277181,79289775,79290959,79292158,79293381,79296471,79297613,79298406,79299050,79300732,79302107,79304015,79305164,79305533,79306100,79307405,79310924,79312642 79069270,79119024,79139777,79162133,79201692,79208449,79216274,79277325,79289889,79291176,79292356,79293653,79296653,79297690,79298580,79299191,79300942,79302212,79304175,79305231,79305601,79306344,79307571,79311184,79316519 Gene ID= ENSG00000108175.16 TPM= 35.32 Transcript Type= protein_coding chr10 79348025 79355337 79348025 79355337 + transcript1811.chr10.nnic@PPIF transcript1811.chr10.nnic protein_coding 79348025,79349076,79349665,79351487,79352317,79353707 79348083,79349106,79349753,79351583,79352392,79355337 Gene ID= ENSG00000108179.13 TPM= 6.79 Transcript Type= NA chr10 79347478 79355337 79347478 79355337 + ENST00000225174.7@PPIF ENST00000225174.7 protein_coding 79347478,79349076,79349665,79351487,79352317,79353707 79347743,79349106,79349753,79351583,79352392,79355337 Gene ID= ENSG00000108179.13 TPM= 318.3 Transcript Type= protein_coding chr10 79382328 79403776 79382328 79403776 - transcript1821.chr10.nnic@ZCCHC24 transcript1821.chr10.nnic protein_coding 79403423,79394276,79382328 79403776,79394440,79386458 Gene ID= ENSG00000165424.6 TPM= 2.72 Transcript Type= NA chr10 79382325 79445627 79382325 79445627 - ENST00000372336.3@ZCCHC24 ENST00000372336.3 protein_coding 79445195,79432558,79394276,79382325 79445627,79432758,79394440,79386458 Gene ID= ENSG00000165424.6 TPM= 35.32 Transcript Type= protein_coding chr10 79797380 79826476 79797380 79826476 - transcript1827.chr10.nnic@NUTM2B-AS1 transcript1827.chr10.nnic antisense_RNA 79826198,79814613,79808759,79806039,79804485,79801924,79797380 79826476,79814716,79808832,79806122,79804527,79802003,79798027 Gene ID= ENSG00000225484.6 TPM= 1.81 Transcript Type= NA chr10 79795680 79826477 79795680 79826477 - transcript1829.chr10.nic@NUTM2B-AS1 transcript1829.chr10.nic antisense_RNA 79826198,79814613,79808759,79806039,79804485,79795680 79826477,79814716,79808832,79806122,79804527,79798027 Gene ID= ENSG00000225484.6 TPM= 2.72 Transcript Type= NA chr10 79691502 79826516 79691502 79826516 - ENST00000601369.5@NUTM2B-AS1 ENST00000601369.5 antisense_RNA 79826198,79814613,79808759,79806039,79804485,79766271,79691502 79826516,79814716,79808832,79806122,79804527,79766324,79692056 Gene ID= ENSG00000225484.6 TPM= 1.81 Transcript Type= antisense_RNA chr10 80078670 80092557 80078670 80092557 + ENST00000372281.7@TMEM254 ENST00000372281.7 protein_coding 80078670,80081841,80082145,80090797 80078786,80081944,80082204,80092557 Gene ID= ENSG00000133678.13 TPM= 27.17 Transcript Type= protein_coding chr10 80079270 80092557 80079270 80092557 + ENST00000467529.5@TMEM254 ENST00000467529.5 protein_coding 80079270,80081841,80082145,80090797 80079307,80081944,80082204,80092557 Gene ID= ENSG00000133678.13 TPM= 7.24 Transcript Type= processed_transcript chr10 80132721 80145359 80132721 80145359 + ENST00000372263.3@PLAC9 ENST00000372263.3 protein_coding 80132721,80142082,80144223,80144900 80132826,80142179,80144343,80145359 Gene ID= ENSG00000189129.13 TPM= 14.49 Transcript Type= protein_coding chr10 80153343 80205583 80153343 80205583 - transcript1851.chr10.nic@ANXA11 transcript1851.chr10.nic protein_coding 80205343,80180941,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80153343 80205583,80181455,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912 Gene ID= ENSG00000122359.17 TPM= 20.37 Transcript Type= NA chr10 80155124 80205572 80155124 80205572 - ENST00000422982.7@ANXA11 ENST00000422982.7 protein_coding 80205343,80176107,80172807,80170800,80168969,80167226,80166890,80166084,80164053,80163534,80163349,80161935,80159100,80157967,80157641,80155124 80205572,80176155,80172869,80170915,80169358,80167313,80166984,80166197,80164143,80163613,80163405,80162028,80159195,80158025,80157763,80155912 Gene ID= ENSG00000122359.17 TPM= 87.39 Transcript Type= protein_coding chr10 80408493 80437115 80408493 80437115 + ENST00000606162.5@FAM213A ENST00000606162.5 protein_coding 80408493,80420466,80422417,80425866,80427332,80431986 80408643,80420645,80422508,80426006,80427496,80437115 Gene ID= ENSG00000122378.13 TPM= 57.5 Transcript Type= protein_coding chr10 80408494 80432997 80408494 80432997 + ENST00000372185.5@FAM213A ENST00000372185.5 protein_coding 80408494,80420483,80422417,80425866,80427332,80431986 80408643,80420645,80422508,80426006,80427496,80432997 Gene ID= ENSG00000122378.13 TPM= 9.51 Transcript Type= protein_coding chr10 80454243 80522628 80454243 80522628 + transcript1867.chr10.nnic@TSPAN14 transcript1867.chr10.nnic protein_coding 80454243,80468547,80489217,80504728,80507228,80509301,80512144,80514019,80516204,80517905 80454371,80468687,80489314,80504778,80507374,80509471,80512269,80514063,80516323,80522628 Gene ID= ENSG00000108219.14 TPM= 38.03 Transcript Type= NA chr10 80454283 80522628 80454283 80522628 + transcript1869.chr10.nnic@TSPAN14 transcript1869.chr10.nnic protein_coding 80454283,80463088,80489217,80504728,80507228,80509301,80512144,80514019,80516204,80517905 80454371,80463127,80489314,80504778,80507374,80509471,80512269,80514063,80516323,80522628 Gene ID= ENSG00000108219.14 TPM= 11.77 Transcript Type= NA chr10 84139440 84153245 84139440 84153245 + ENST00000372134.5@GHITM ENST00000372134.5 protein_coding 84139440,84141462,84142655,84143995,84144875,84148730,84150055,84150709,84152264 84139593,84141629,84142754,84144106,84145016,84148838,84150243,84150880,84153245 Gene ID= ENSG00000165678.20 TPM= 864.8 Transcript Type= protein_coding chr10 84328589 84518521 84328589 84518521 + ENST00000372088.6@CCSER2 ENST00000372088.6 protein_coding 84328589,84371014,84373619,84417771,84425731,84438512,84463933,84470372,84477575,84513449 84328808,84372469,84373815,84417861,84425893,84438707,84464016,84470458,84477664,84518521 Gene ID= ENSG00000107771.15 TPM= 3.62 Transcript Type= protein_coding chr10 85599555 86366478 85599555 86366478 - ENST00000327946.11@GRID1 ENST00000327946.11 protein_coding 86366314,86363941,86206364,86138819,85916186,85869010,85856029,85854496,85729513,85727855,85724352,85723003,85647202,85619867,85613407,85599555 86366478,86364096,86206648,86139024,85916239,85869180,85856190,85854615,85729614,85728052,85724676,85723141,85647397,85620033,85613647,85602701 Gene ID= ENSG00000182771.18 TPM= 9.96 Transcript Type= protein_coding chr10 86435256 86521815 86435256 86521815 - ENST00000298767.9@WAPL ENST00000298767.9 protein_coding 86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435256 86521815,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608 Gene ID= ENSG00000062650.18 TPM= 27.17 Transcript Type= protein_coding chr10 86435257 86521768 86435257 86521768 - ENST00000618527.4@WAPL ENST00000618527.4 protein_coding 86521675,86521365,86517571,86499718,86497201,86473878,86472612,86472208,86470992,86467279,86461176,86460399,86458989,86453656,86453220,86451967,86446242,86443275,86437920,86435257 86521768,86521541,86518091,86500743,86497319,86473973,86472764,86472344,86471103,86467506,86461287,86460496,86459065,86453831,86453335,86452131,86446449,86443363,86438015,86437608 Gene ID= ENSG00000062650.18 TPM= 4.53 Transcript Type= protein_coding chr10 86756616 86929768 86756616 86929768 + transcript1901.chr10.nic@BMPR1A transcript1901.chr10.nic protein_coding 86756616,86838865,86843406,86875867,86890062,86892127,86899794,86900027,86912240,86917134,86919172,86921520,86923376,86923594,86929300 86756919,86838979,86843510,86876085,86890224,86892229,86899890,86900126,86912384,86917326,86919469,86921695,86923506,86924641,86929768 Gene ID= ENSG00000107779.13 TPM= 2.72 Transcript Type= NA chr10 86958656 86963260 86958656 86963260 + ENST00000372017.3@SNCG ENST00000372017.3 protein_coding 86958656,86959633,86960001,86962604,86962965 86958818,86959674,86960128,86962675,86963260 Gene ID= ENSG00000173267.13 TPM= 298.6 Transcript Type= protein_coding chr10 86959375 86963258 86959375 86963258 + ENST00000483064.1@SNCG ENST00000483064.1 protein_coding 86959375,86960001,86962604,86962965 86959674,86960128,86962675,86963258 Gene ID= ENSG00000173267.13 TPM= 16.98 Transcript Type= processed_transcript chr10 86968192 86970915 86968192 86970915 + ENST00000372013.7@ADIRF ENST00000372013.7 protein_coding 86968192,86970200,86970476 86968605,86970262,86970915 Gene ID= ENSG00000148671.13 TPM= 20.83 Transcript Type= protein_coding chr10 87050486 87094866 87050486 87094866 - ENST00000277865.4@GLUD1 ENST00000277865.4 protein_coding 87094325,87076576,87075968,87074551,87068063,87062656,87060915,87060688,87060161,87059150,87057691,87053342,87050486 87094866,87076656,87076023,87074614,87068157,87062835,87061052,87060825,87060241,87059273,87057782,87053404,87051870 Gene ID= ENSG00000148672.8 TPM= 331.43 Transcript Type= protein_coding chr10 87095163 87191469 87095163 87191469 + transcript1949.chr10.nnic@FAM35A transcript1949.chr10.nnic protein_coding 87095163,87096934,87104682,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484 87095248,87096989,87104962,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191469 Gene ID= ENSG00000122376.11 TPM= 1.81 Transcript Type= NA chr10 87095163 87191469 87095163 87191469 + transcript1967.chr10.nnic@FAM35A transcript1967.chr10.nnic protein_coding 87095163,87096934,87158048,87170478,87170840,87175889,87180075,87187085,87190484 87095248,87096989,87158155,87170672,87170974,87176095,87180303,87187200,87191469 Gene ID= ENSG00000122376.11 TPM= 1.81 Transcript Type= NA chr10 87096930 87191469 87096930 87191469 + transcript1968.chr10.nnic@FAM35A transcript1968.chr10.nnic protein_coding 87096930,87147893,87151350,87158048,87170478,87170840,87180075,87187085,87190484 87096989,87148000,87152879,87158155,87170672,87170974,87180303,87187200,87191469 Gene ID= ENSG00000122376.11 TPM= 2.72 Transcript Type= NA chr10 87095196 87191468 87095196 87191468 + ENST00000298786.4@FAM35A ENST00000298786.4 protein_coding 87095196,87096934,87151350,87158048,87170478,87170840,87175889,87180075,87187085,87190484 87095248,87096989,87152879,87158155,87170672,87170974,87176095,87180303,87187200,87191468 Gene ID= ENSG00000122376.11 TPM= 18.11 Transcript Type= protein_coding chr10 87095196 87191463 87095196 87191463 + ENST00000298784.5@FAM35A ENST00000298784.5 protein_coding 87095196,87096934,87151350,87158048,87170478,87170840,87180075,87187085,87190484 87095248,87096989,87152879,87158155,87170672,87170974,87180303,87187200,87191463 Gene ID= ENSG00000122376.11 TPM= 13.58 Transcript Type= protein_coding chr10 87287962 87342388 87287962 87342388 - transcript1988.chr10.nic@NUTM2A-AS1 transcript1988.chr10.nic antisense_RNA 87342242,87336786,87326630,87307957,87287962 87342388,87336889,87326672,87308060,87288495 Gene ID= ENSG00000223482.7 TPM= 2.72 Transcript Type= NA chr10 87333773 87342627 87333773 87342627 - transcript1996.chr10.nic@NUTM2A-AS1 transcript1996.chr10.nic antisense_RNA 87342242,87336786,87333773 87342627,87336889,87334814 Gene ID= ENSG00000223482.7 TPM= 1.81 Transcript Type= NA chr10 87342736 87357882 87342736 87357882 + ENST00000439559.2@LINC00863 ENST00000439559.2 lincRNA 87342736,87344437,87354620,87355091,87355938 87343405,87344495,87354897,87355425,87357882 Gene ID= ENSG00000224914.3 TPM= 1.81 Transcript Type= lincRNA chr10 87504875 87553388 87504875 87553388 + ENST00000371996.8@MINPP1 ENST00000371996.8 protein_coding 87504875,87508336,87513124,87521036,87552082 87505552,87508533,87513221,87521169,87553388 Gene ID= ENSG00000107789.15 TPM= 139.45 Transcript Type= protein_coding chr10 87504875 87553388 87504875 87553388 + ENST00000371994.8@MINPP1 ENST00000371994.8 protein_coding 87504875,87508336,87552082 87505552,87508533,87553388 Gene ID= ENSG00000107789.15 TPM= 1.81 Transcript Type= protein_coding chr10 87659613 87747705 87659613 87747705 + ENST00000361175.8@PAPSS2 ENST00000361175.8 protein_coding 87659613,87709196,87713075,87714044,87714745,87714985,87715732,87727284,87741235,87743373,87745002,87745832 87660008,87709313,87713310,87714182,87714863,87715098,87715843,87727489,87741370,87743641,87745231,87747705 Gene ID= ENSG00000198682.12 TPM= 278.51 Transcript Type= protein_coding chr10 87659719 87747703 87659719 87747703 + ENST00000456849.1@PAPSS2 ENST00000456849.1 protein_coding 87659719,87709196,87713075,87714044,87714745,87714985,87715732,87721756,87727284,87741235,87743373,87745002,87745832 87660008,87709313,87713310,87714182,87714863,87715098,87715843,87721770,87727489,87741370,87743641,87745231,87747703 Gene ID= ENSG00000198682.12 TPM= 73.86 Transcript Type= protein_coding chr10 87744649 87818194 87744649 87818194 - transcript2019.chr10.nnic@ATAD1 transcript2019.chr10.nnic protein_coding 87818167,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87756789,87744649 87818194,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87756922,87746806 Gene ID= ENSG00000138138.13 TPM= 2.72 Transcript Type= NA chr10 87753105 87818196 87753105 87818196 - transcript2020.chr10.nnic@ATAD1 transcript2020.chr10.nnic protein_coding 87818167,87814438,87792657,87790330,87784470,87776321,87770952,87767673,87756789,87753105 87818196,87814612,87792755,87790430,87784601,87776427,87771041,87767723,87756922,87754807 Gene ID= ENSG00000138138.13 TPM= 2.72 Transcript Type= NA chr10 87751514 87818250 87751514 87818250 - transcript2022.chr10.nnic@ATAD1 transcript2022.chr10.nnic protein_coding 87818167,87814438,87792657,87790310,87784470,87776321,87770952,87767673,87756789,87751514 87818250,87814612,87792755,87790430,87784670,87776427,87771041,87767723,87756922,87754807 Gene ID= ENSG00000138138.13 TPM= 52.52 Transcript Type= NA chr10 87753105 87818250 87753105 87818250 - transcript2025.chr10.nnic@ATAD1 transcript2025.chr10.nnic protein_coding 87818167,87814438,87792657,87790310,87776321,87770952,87767673,87756789,87753105 87818250,87814612,87792755,87790430,87776427,87771041,87767723,87756922,87754807 Gene ID= ENSG00000138138.13 TPM= 2.72 Transcript Type= NA chr10 87863626 87967917 87863626 87967917 + transcript2036.chr10.nnic@PTEN transcript2036.chr10.nnic protein_coding 87863626,87894025,87931046,87933013,87952118,87957853,87960894,87965287 87864548,87894109,87931089,87933251,87952259,87958019,87961118,87967917 Gene ID= ENSG00000171862.10 TPM= 53.43 Transcript Type= NA chr10 87863638 87937382 87863638 87937382 + transcript2038.chr10.nnic@PTEN transcript2038.chr10.nnic protein_coding 87863638,87894025,87925513,87931046,87933013,87934628 87864548,87894109,87925557,87931089,87933251,87937382 Gene ID= ENSG00000171862.10 TPM= 2.72 Transcript Type= NA chr10 88284962 88362728 88284962 88362728 - transcript2039.chr10.nnic@RNLS transcript2039.chr10.nnic protein_coding 88362552,88314466,88309387,88284962 88362728,88314641,88309476,88285506 Gene ID= ENSG00000184719.11 TPM= 2.72 Transcript Type= NA chr10 88273864 88584530 88273864 88584530 - ENST00000371947.7@RNLS ENST00000371947.7 protein_coding 88583073,88582202,88581567,88572903,88362552,88314466,88273864 88584530,88582307,88581709,88573061,88362725,88314641,88275032 Gene ID= ENSG00000184719.11 TPM= 1.81 Transcript Type= protein_coding chr10 88284104 88362728 88284104 88362728 - transcript2041.chr10.nic@RNLS transcript2041.chr10.nic protein_coding 88362552,88314466,88284104 88362728,88314641,88285506 Gene ID= ENSG00000184719.11 TPM= 13.58 Transcript Type= NA chr10 88880251 88923500 88880251 88923500 + transcript2054.chr10.nnic@STAMBPL1 transcript2054.chr10.nnic protein_coding 88880251,88901656,88905443,88908702,88910916,88914534,88916680,88921283,88922337,88923168 88880638,88901738,88905660,88908777,88911011,88914658,88916817,88921395,88922436,88923500 Gene ID= ENSG00000138134.11 TPM= 3.62 Transcript Type= NA chr10 88879734 88923487 88879734 88923487 + ENST00000371926.7@STAMBPL1 ENST00000371926.7 protein_coding 88879734,88901656,88905443,88908702,88910916,88913101,88914534,88916680,88921283,88922337,88923168 88880638,88901738,88905660,88908777,88911011,88913458,88914658,88916817,88921395,88922436,88923487 Gene ID= ENSG00000138134.11 TPM= 57.95 Transcript Type= protein_coding chr10 88935070 88991374 88935070 88991374 - transcript2057.chr10.nic@ACTA2 transcript2057.chr10.nic protein_coding 88990939,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935070 88991374,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366 Gene ID= ENSG00000107796.13 TPM= 65.2 Transcript Type= NA chr10 88935070 88991369 88935070 88991369 - transcript2058.chr10.nic@ACTA2 transcript2058.chr10.nic protein_coding 88991022,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935070 88991369,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366 Gene ID= ENSG00000107796.13 TPM= 25.36 Transcript Type= NA chr10 88935074 88952773 88935074 88952773 - ENST00000224784.10@ACTA2 ENST00000224784.10 protein_coding 88952731,88948802,88947258,88943797,88941785,88941229,88939507,88938061,88935074 88952773,88948953,88947386,88943907,88941869,88941390,88939698,88938242,88935366 Gene ID= ENSG00000107796.13 TPM= 371.27 Transcript Type= protein_coding chr10 88990963 89015102 88990963 89015102 + transcript2062.chr10.nic@FAS transcript2062.chr10.nic protein_coding 88990963,89003029,89007700,89008889,89010539,89010753,89011999,89013343,89014119 88991212,89003194,89007837,89008997,89010600,89010815,89012081,89013367,89015102 Gene ID= ENSG00000026103.21 TPM= 1.81 Transcript Type= NA chr10 88990657 89015785 88990657 89015785 + ENST00000355740.6@FAS ENST00000355740.6 protein_coding 88990657,89003029,89007700,89008889,89010539,89010753,89011999,89013343,89014119 88990906,89003194,89007837,89008997,89010600,89010815,89012081,89013367,89015785 Gene ID= ENSG00000026103.21 TPM= 42.56 Transcript Type= protein_coding chr10 89213571 89342720 89213571 89342720 - transcript2072.chr10.nnic@LIPA transcript2072.chr10.nnic protein_coding 89342561,89314543,89247538,89245676,89228200,89226895,89225092,89223684,89222511,89215938,89213571 89342720,89314659,89247649,89245793,89228398,89227004,89225228,89223830,89222582,89216009,89215061 Gene ID= ENSG00000107798.17 TPM= 5.73 Transcript Type= NA chr10 89213569 89252058 89213569 89252058 - ENST00000336233.9@LIPA ENST00000336233.9 protein_coding 89251737,89247538,89245676,89228200,89226895,89225092,89223684,89222511,89215938,89213569 89252058,89247649,89245793,89228398,89227004,89225228,89223830,89222582,89216009,89215061 Gene ID= ENSG00000107798.17 TPM= 153.34 Transcript Type= protein_coding chr10 89334514 89342710 89334514 89342710 - transcript2081.chr10.nnic@LIPA transcript2081.chr10.nnic protein_coding 89342561,89338195,89334514 89342710,89338335,89335534 Gene ID= ENSG00000107798.17 TPM= 1.81 Transcript Type= NA chr10 89327894 89340971 89327894 89340971 + ENST00000371818.8@IFIT3 ENST00000371818.8 protein_coding 89327894,89338661 89328078,89340971 Gene ID= ENSG00000119917.13 TPM= 43.47 Transcript Type= protein_coding chr10 89332484 89340971 89332484 89340971 + ENST00000371811.4@IFIT3 ENST00000371811.4 protein_coding 89332484,89338661 89332627,89340971 Gene ID= ENSG00000119917.13 TPM= 9.96 Transcript Type= protein_coding chr10 89392583 89403992 89392583 89403992 - transcript2088.chr10.nnic@LIPA transcript2088.chr10.nnic protein_coding 89402281,89399895,89392583 89403992,89400003,89392717 Gene ID= ENSG00000107798.17 TPM= 7.24 Transcript Type= NA chr10 89392546 89403988 89392546 89403988 + ENST00000371804.3@IFIT1 ENST00000371804.3 protein_coding 89392546,89402281 89392717,89403988 Gene ID= ENSG00000185745.9 TPM= 113.19 Transcript Type= protein_coding chr10 89414586 89421001 89414586 89421001 + ENST00000371795.4@IFIT5 ENST00000371795.4 protein_coding 89414586,89417205 89414803,89421001 Gene ID= ENSG00000152778.8 TPM= 69.73 Transcript Type= protein_coding chr10 89579497 89645572 89579497 89645572 - ENST00000307534.8@PANK1 ENST00000307534.8 protein_coding 89644600,89611696,89599252,89593813,89593197,89588652,89579497 89645572,89612048,89599505,89593989,89593320,89588777,89584465 Gene ID= ENSG00000152782.16 TPM= 13.58 Transcript Type= protein_coding chr10 89701610 89774939 89701610 89774939 + ENST00000260753.8@KIF20B ENST00000260753.8 protein_coding 89701610,89705294,89709167,89709345,89709927,89710961,89714047,89714955,89716436,89717424,89717576,89718710,89719419,89723964,89725020,89726413,89727856,89729128,89732903,89737387,89738958,89743808,89745899,89751346,89752567,89754518,89758706,89760526,89762638,89768290,89768738,89772689,89773971 89701680,89705441,89709253,89709461,89710065,89711145,89714083,89715182,89716547,89717495,89717722,89718872,89719706,89724103,89725158,89726521,89727896,89729247,89733056,89738617,89739096,89743927,89745959,89751471,89752691,89754673,89758882,89760636,89762835,89768391,89768888,89772831,89774939 Gene ID= ENSG00000138182.14 TPM= 1.81 Transcript Type= protein_coding chr10 90871948 90905950 90871948 90905950 + transcript2102.chr10.nic@RPP30 transcript2102.chr10.nic protein_coding 90871948,90874869,90875558,90876024,90879063,90885812,90894775,90895454,90895880,90896313,90900570,90902243,90903192,90905302 90872068,90874924,90875614,90876098,90879134,90885901,90894891,90895483,90895917,90896392,90900668,90902344,90903276,90905950 Gene ID= ENSG00000148688.13 TPM= 1.81 Transcript Type= NA chr10 90871716 90902190 90871716 90902190 + ENST00000371703.7@RPP30 ENST00000371703.7 protein_coding 90871716,90874869,90875558,90876024,90879063,90885812,90894775,90895454,90895880,90896313,90900570 90872068,90874924,90875614,90876098,90879134,90885901,90894891,90895483,90895917,90896392,90902190 Gene ID= ENSG00000148688.13 TPM= 8.15 Transcript Type= protein_coding chr10 90871948 90900773 90871948 90900773 + transcript2105.chr10.nic@RPP30 transcript2105.chr10.nic protein_coding 90871948,90874869,90875558,90876024,90879063,90885812,90894775,90896313,90900570 90872068,90874924,90875614,90876098,90879134,90885901,90895917,90896392,90900773 Gene ID= ENSG00000148688.13 TPM= 2.72 Transcript Type= NA chr10 91162327 91284263 91162327 91284263 + transcript2109.chr10.nnic@PCGF5 transcript2109.chr10.nnic protein_coding 91162327,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269 91162584,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91284263 Gene ID= ENSG00000180628.14 TPM= 2.49 Transcript Type= NA chr10 91162849 91284263 91162849 91284263 + transcript2110.chr10.nnic@PCGF5 transcript2110.chr10.nnic protein_coding 91162849,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269 91163081,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91284263 Gene ID= ENSG00000180628.14 TPM= 7.02 Transcript Type= NA chr10 91220606 91284337 91220606 91284337 + transcript2114.chr10.nnic@PCGF5 transcript2114.chr10.nnic protein_coding 91220606,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91278269 91220836,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91284337 Gene ID= ENSG00000180628.14 TPM= 7.02 Transcript Type= NA chr10 91163025 91227951 91163025 91227951 + transcript2117.chr10.nic@PCGF5 transcript2117.chr10.nic protein_coding 91163025,91222689,91227337 91163081,91222983,91227951 Gene ID= ENSG00000180628.14 TPM= 1.81 Transcript Type= NA chr10 91220783 91227960 91220783 91227960 + ENST00000490164.1@PCGF5 ENST00000490164.1 protein_coding 91220783,91222689,91227337 91220836,91222983,91227960 Gene ID= ENSG00000180628.14 TPM= 5.43 Transcript Type= processed_transcript chr10 91220788 91284331 91220788 91284331 + ENST00000336126.5@PCGF5 ENST00000336126.5 protein_coding 91220788,91222689,91240484,91248505,91248665,91251292,91261326,91264431,91271638,91278269 91220836,91222983,91240580,91248560,91248724,91251440,91261424,91264520,91271697,91284331 Gene ID= ENSG00000180628.14 TPM= 6.11 Transcript Type= protein_coding chr10 91410345 91514761 91410345 91514761 + ENST00000298068.9@HECTD2 ENST00000298068.9 protein_coding 91410345,91425281,91460427,91461254,91462095,91478201,91481094,91482967,91484507,91485180,91487682,91491200,91492352,91493420,91496214,91498108,91498872,91499044,91500502,91501191,91512264 91410576,91425410,91460565,91461356,91462184,91478265,91481139,91483076,91484655,91485303,91487778,91491307,91492484,91493508,91496372,91498182,91498959,91499150,91500617,91501334,91514761 Gene ID= ENSG00000165338.16 TPM= 3.62 Transcript Type= protein_coding chr10 91628442 91633054 91628442 91633054 - ENST00000238994.5@PPP1R3C ENST00000238994.5 protein_coding 91632956,91628442 91633054,91630866 Gene ID= ENSG00000119938.8 TPM= 67.01 Transcript Type= protein_coding chr10 91923769 92030325 91923769 92030325 + ENST00000265990.10@BTAF1 ENST00000265990.10 protein_coding 91923769,91935657,91939952,91942422,91951403,91953737,91956528,91957225,91959065,91959785,91959978,91962538,91964077,91966637,91980454,91981643,91982083,91982587,91984201,91989154,91992119,91993694,91994535,91996369,91997603,92008123,92008829,92009041,92011073,92011286,92013667,92013899,92016340,92018783,92024756,92026592,92027130,92028790 91924090,91935780,91940066,91942568,91951566,91953873,91956657,91957293,91959154,91959880,91960154,91962678,91964201,91966757,91980558,91981792,91982225,91982761,91984404,91989580,91992309,91993847,91994644,91996570,91997751,92008275,92008950,92009208,92011150,92011415,92013808,92014029,92016465,92018935,92024967,92026751,92027300,92030325 Gene ID= ENSG00000095564.13 TPM= 2.72 Transcript Type= protein_coding chr10 92291152 92352082 92291152 92352082 + transcript2143.chr10.nnic@MARCH5 transcript2143.chr10.nnic protein_coding 92291152,92311135,92340673,92349349,92349671,92351091 92291529,92311337,92340803,92349532,92349787,92352082 Gene ID= ENSG00000198060.9 TPM= 6.34 Transcript Type= NA chr10 92291152 92354068 92291152 92354068 + transcript2145.chr10.nnic@MARCH5 transcript2145.chr10.nnic protein_coding 92291152,92311135,92349349,92349671,92351091 92291529,92311337,92349532,92349837,92354068 Gene ID= ENSG00000198060.9 TPM= 3.17 Transcript Type= NA chr10 92291163 92353964 92291163 92353964 + ENST00000358935.2@MARCH5 ENST00000358935.2 protein_coding 92291163,92311135,92340673,92349349,92349671,92351091 92291529,92311337,92340803,92349532,92349837,92353964 Gene ID= ENSG00000198060.9 TPM= 105.04 Transcript Type= protein_coding chr10 92452241 92574084 92452241 92574084 - transcript2149.chr10.nnic@IDE transcript2149.chr10.nnic protein_coding 92573922,92559034,92537366,92534578,92531748,92514920,92510050,92508728,92508113,92507575,92506442,92504794,92490493,92487196,92483255,92479277,92475884,92474841,92470254,92468879,92465676,92463731,92461191,92456359,92455576,92452241 92574084,92559215,92537550,92534785,92531917,92515042,92510162,92508890,92508205,92507666,92506522,92504897,92490595,92487318,92483337,92479421,92475994,92474961,92470345,92468990,92465843,92464003,92461252,92456431,92455643,92454539 Gene ID= ENSG00000119912.15 TPM= 2.72 Transcript Type= NA chr10 92474494 92574112 92474494 92574112 - transcript2153.chr10.nic@IDE transcript2153.chr10.nic protein_coding 92573922,92537366,92534578,92531748,92514920,92510050,92508728,92508113,92507575,92506442,92504794,92490493,92487196,92483255,92479277,92475884,92474494 92574112,92537550,92534785,92531917,92515042,92510162,92508890,92508205,92507666,92506522,92504897,92490595,92487318,92483337,92479421,92475994,92474961 Gene ID= ENSG00000119912.15 TPM= 1.81 Transcript Type= NA chr10 92689954 92695669 92689954 92695669 + transcript2154.chr10.nnic@HHEX transcript2154.chr10.nnic protein_coding 92689954,92690029,92692368,92692702,92694547 92689969,92690347,92692546,92692752,92695669 Gene ID= ENSG00000152804.10 TPM= 1.81 Transcript Type= NA chr10 92689951 92695646 92689951 92695646 + ENST00000282728.9@HHEX ENST00000282728.9 protein_coding 92689951,92692368,92692702,92694547 92690347,92692546,92692752,92695646 Gene ID= ENSG00000152804.10 TPM= 42.56 Transcript Type= protein_coding chr10 92848520 93059490 92848520 93059490 + ENST00000260762.10@EXOC6 ENST00000260762.10 protein_coding 92848520,92893349,92894794,92894930,92899599,92909427,92915758,92919982,92928339,92934144,92934310,92935814,92940727,92948274,92952273,92954630,92955580,92974053,92997474,93014194,93056924,93058223 92848634,92893520,92894841,92895020,92899644,92909631,92915913,92920050,92928422,92934190,92934430,92935885,92940824,92948379,92952382,92954741,92955714,92974232,92997615,93014267,93057036,93059490 Gene ID= ENSG00000138190.16 TPM= 15.39 Transcript Type= protein_coding chr10 93306430 93482194 93306430 93482194 - ENST00000359263.8@MYOF ENST00000359263.8 protein_coding 93482107,93456882,93452050,93431408,93426071,93409573,93408787,93404157,93404023,93402860,93402232,93401418,93399392,93397388,93397247,93396142,93392917,93389030,93387797,93381219,93379863,93377323,93374763,93372930,93369645,93366392,93363961,93361452,93359833,93356675,93355628,93353811,93351665,93351413,93351197,93349808,93347617,93343856,93340153,93337815,93335921,93333758,93333221,93329664,93328763,93325826,93323270,93323078,93319872,93316714,93313020,93310534,93310020,93306430 93482194,93456937,93452141,93431516,93426158,93409739,93408915,93404219,93404073,93402890,93402347,93401544,93399495,93397456,93397290,93396224,93392955,93389154,93387913,93381396,93379987,93377429,93374955,93373085,93369776,93366555,93364075,93361557,93359978,93356848,93355736,93353888,93351846,93351571,93351295,93349969,93347782,93343932,93340164,93337913,93336046,93333913,93333312,93329834,93328911,93325965,93323358,93323173,93320013,93316813,93313210,93310643,93310167,93307001 Gene ID= ENSG00000138119.16 TPM= 26.26 Transcript Type= protein_coding chr10 93496632 93529092 93496632 93529092 + ENST00000371485.7@CEP55 ENST00000371485.7 protein_coding 93496632,93500040,93503113,93506988,93515405,93516935,93518877,93519682,93527950 93496923,93500234,93503388,93507056,93515555,93517248,93518948,93519807,93529092 Gene ID= ENSG00000138180.15 TPM= 1.81 Transcript Type= protein_coding chr10 93566665 93590072 93566665 93590072 + ENST00000371481.8@FFAR4 ENST00000371481.8 protein_coding 93566665,93576091,93587220 93567287,93576219,93590072 Gene ID= ENSG00000186188.10 TPM= 1.81 Transcript Type= protein_coding chr10 93591687 93601663 93591687 93601663 - ENST00000371467.5@RBP4 ENST00000371467.5 protein_coding 93601362,93600918,93600667,93600393,93593823,93591687 93601663,93601046,93600803,93600499,93594035,93592112 Gene ID= ENSG00000138207.13 TPM= 1.81 Transcript Type= protein_coding chr10 93669615 93702583 93669615 93702583 - transcript2176.chr10.nnic@FRA10AC1 transcript2176.chr10.nnic protein_coding 93702375,93700030,93698301,93698136,93694861,93692646,93692009,93687404,93685246,93684056,93681480,93676653,93675628,93670770,93669615 93702583,93700106,93698396,93698181,93694937,93692729,93692093,93687449,93685359,93684098,93681598,93676691,93675704,93670848,93669868 Gene ID= ENSG00000148690.11 TPM= 1.81 Transcript Type= NA chr10 93893991 93909830 93893991 93909830 + ENST00000483386.5@SLC35G1 ENST00000483386.5 protein_coding 93893991,93906252,93907099 93894160,93906385,93909830 Gene ID= ENSG00000176273.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr10 94333226 94362939 94333226 94362939 - ENST00000371361.3@NOC3L ENST00000371361.3 protein_coding 94362830,94361665,94358083,94357174,94356535,94354963,94352896,94352310,94350113,94349250,94346425,94344853,94344415,94341673,94340433,94340276,94339739,94338608,94337777,94334634,94333226 94362939,94361872,94358215,94357331,94356591,94355093,94353057,94352403,94350288,94349378,94346556,94344933,94344515,94341745,94340496,94340347,94339920,94338736,94337874,94334718,94334305 Gene ID= ENSG00000173145.11 TPM= 24.45 Transcript Type= protein_coding chr10 94402493 94535928 94402493 94535928 + transcript2184.chr10.nnic@TBC1D12 transcript2184.chr10.nnic protein_coding 94402493,94441896,94447635,94474668,94493365,94497055,94500221,94507267,94511583,94521955,94522344,94531202,94533028 94403584,94442019,94447670,94474783,94493447,94497172,94500327,94507347,94511654,94522083,94522453,94531460,94535928 Gene ID= ENSG00000108239.8 TPM= 1.81 Transcript Type= NA chr10 94402504 94535930 94402504 94535930 + ENST00000225235.4@TBC1D12 ENST00000225235.4 protein_coding 94402504,94441896,94474668,94493365,94497055,94500221,94507267,94510091,94511583,94521955,94522344,94531202,94533028 94403584,94442019,94474783,94493447,94497172,94500327,94507347,94510179,94511654,94522083,94522453,94531460,94535930 Gene ID= ENSG00000108239.8 TPM= 6.34 Transcript Type= protein_coding chr10 94545817 94602099 94545817 94602099 + ENST00000348459.9@HELLS ENST00000348459.9 protein_coding 94545817,94546377,94554126,94558139,94562691,94562812,94571388,94573960,94574554,94576662,94581326,94582963,94588229,94590413,94590638,94592229,94592395,94593499,94594695,94596860,94597035,94601528 94545952,94546498,94554248,94558195,94562727,94562876,94571429,94574187,94574736,94576805,94581522,94583059,94588390,94590552,94590776,94592312,94592514,94593615,94594854,94596956,94597111,94602099 Gene ID= ENSG00000119969.14 TPM= 2.72 Transcript Type= protein_coding chr10 95237572 95291024 95237572 95291024 - ENST00000329399.6@PDLIM1 ENST00000329399.6 protein_coding 95290820,95271633,95268778,95263864,95247215,95238568,95237572 95291024,95271784,95268862,95264063,95247366,95238685,95238111 Gene ID= ENSG00000107438.8 TPM= 42.56 Transcript Type= protein_coding chr10 95311774 95561393 95311774 95561393 - transcript2202.chr10.nic@SORBS1 transcript2202.chr10.nic protein_coding 95561320,95491035,95441126,95437490,95432448,95422190,95421961,95414494,95410633,95406118,95399017,95397220,95384238,95383985,95381685,95367650,95357631,95354882,95351209,95346406,95341564,95341285,95339133,95321963,95318320,95311774 95561393,95491120,95441180,95437555,95432576,95422216,95422073,95414862,95410777,95406147,95399189,95397283,95384285,95384114,95381799,95367699,95357803,95354967,95351376,95346452,95341678,95341410,95339327,95322021,95318432,95315126 Gene ID= ENSG00000095637.21 TPM= 3.62 Transcript Type= NA chr10 95605938 95656654 95605938 95656654 - transcript2204.chr10.nic@ALDH18A1 transcript2204.chr10.nic protein_coding 95656446,95653290,95642992,95637287,95637093,95633491,95632959,95628368,95627442,95626703,95625362,95621031,95616477,95613966,95613742,95611256,95610197,95605938 95656654,95653405,95643206,95637436,95637197,95633649,95633049,95628492,95627586,95626776,95625455,95621251,95616614,95614161,95613863,95611442,95610292,95606943 Gene ID= ENSG00000059573.8 TPM= 9.81 Transcript Type= NA chr10 95605945 95656706 95605945 95656706 - ENST00000371221.3@ALDH18A1 ENST00000371221.3 protein_coding 95656597,95653290,95642992,95637287,95637093,95633497,95632959,95628368,95627442,95626703,95625362,95621031,95616477,95613966,95613742,95611256,95610197,95605945 95656706,95653405,95643206,95637436,95637197,95633649,95633049,95628492,95627586,95626776,95625455,95621251,95616614,95614161,95613863,95611442,95610292,95606943 Gene ID= ENSG00000059573.8 TPM= 20.67 Transcript Type= protein_coding chr10 95663381 95693943 95663381 95693943 - transcript2208.chr10.nnic@TCTN3 transcript2208.chr10.nnic protein_coding 95693644,95693353,95692920,95687592,95687247,95687044,95686495,95685556,95684499,95683522,95683101,95682651,95680472,95663381 95693943,95693476,95693038,95687719,95687355,95687159,95686530,95685636,95684624,95683629,95683180,95682804,95680609,95664300 Gene ID= ENSG00000119977.20 TPM= 12.22 Transcript Type= NA chr10 95663381 95693932 95663381 95693932 - transcript2212.chr10.nnic@TCTN3 transcript2212.chr10.nnic protein_coding 95693644,95693353,95692920,95687592,95687247,95687044,95686495,95684499,95683522,95683101,95682651,95680472,95663381 95693932,95693476,95693038,95687719,95687355,95687159,95686530,95684624,95683629,95683195,95682804,95680609,95664300 Gene ID= ENSG00000119977.20 TPM= 6.79 Transcript Type= NA chr10 95756133 95868542 95756133 95868542 + transcript2221.chr10.nnic@ENTPD1 transcript2221.chr10.nnic protein_coding 95756133,95823237,95839691,95842344,95844476,95845357,95847569,95860469,95864724,95866177 95756255,95823364,95839808,95842494,95844635,95845596,95847706,95860582,95864861,95868542 Gene ID= ENSG00000138185.19 TPM= 2.72 Transcript Type= NA chr10 95872989 95907888 95872989 95907888 - transcript2226.chr10.nnic@ENTPD1-AS1 transcript2226.chr10.nnic antisense_RNA 95907778,95904830,95897558,95894448,95876518,95872989 95907888,95904938,95897679,95894487,95876660,95875666 Gene ID= ENSG00000226688.6 TPM= 2.42 Transcript Type= NA chr10 95872989 95907891 95872989 95907891 - transcript2233.chr10.nic@ENTPD1-AS1 transcript2233.chr10.nic antisense_RNA 95907663,95904830,95897558,95876518,95872989 95907891,95904938,95897679,95876660,95875666 Gene ID= ENSG00000226688.6 TPM= 2.42 Transcript Type= NA chr10 95873041 95908133 95873041 95908133 - transcript2238.chr10.nic@ENTPD1-AS1 transcript2238.chr10.nic antisense_RNA 95907778,95904830,95876518,95873041 95908133,95904938,95876660,95875666 Gene ID= ENSG00000226688.6 TPM= 5.13 Transcript Type= NA chr10 96043394 96060870 96043394 96060870 + ENST00000265992.9@CCNJ ENST00000265992.9 protein_coding 96043394,96044353,96050256,96056701,96057121,96057830 96043719,96044462,96050466,96057000,96057247,96060870 Gene ID= ENSG00000107443.15 TPM= 1.81 Transcript Type= protein_coding chr10 96191702 96271540 96191702 96271540 - ENST00000224337.9@BLNK ENST00000224337.9 protein_coding 96271352,96246984,96242735,96230794,96227410,96223826,96216653,96215321,96209838,96207872,96207011,96204532,96204057,96200982,96200075,96196908,96191702 96271540,96247049,96242784,96230834,96227566,96223989,96216734,96215389,96209907,96207899,96207053,96204616,96204088,96201058,96200158,96197063,96192092 Gene ID= ENSG00000095585.16 TPM= 1.81 Transcript Type= protein_coding chr10 96520675 96587331 96520675 96587331 - transcript2253.chr10.nic@TM9SF3 transcript2253.chr10.nic protein_coding 96586734,96576634,96565304,96561978,96559659,96552928,96551245,96547895,96544076,96533051,96530540,96528031,96527413,96527213,96520675 96587331,96576829,96565426,96562138,96559736,96553059,96551411,96547989,96544206,96533190,96530608,96528177,96527545,96527289,96522330 Gene ID= ENSG00000077147.14 TPM= 7.24 Transcript Type= NA chr10 96518109 96587052 96518109 96587052 - ENST00000371142.8@TM9SF3 ENST00000371142.8 protein_coding 96586734,96576634,96565304,96561978,96559659,96552928,96551245,96547895,96544076,96533051,96530540,96528031,96527413,96527213,96518109 96587052,96576829,96565426,96562138,96559736,96553059,96551411,96547989,96544206,96533190,96530608,96528177,96527496,96527289,96522330 Gene ID= ENSG00000077147.14 TPM= 276.19 Transcript Type= protein_coding chr10 96593312 96720514 96593312 96720514 - ENST00000339364.9@PIK3AP1 ENST00000339364.9 protein_coding 96720382,96709567,96656798,96652698,96651509,96651248,96648659,96645473,96628398,96626708,96623472,96620352,96616639,96609712,96603979,96602280,96593312 96720514,96709983,96656934,96652842,96651651,96651380,96648855,96645662,96628493,96626905,96623537,96620557,96616711,96609867,96604049,96602398,96595634 Gene ID= ENSG00000155629.14 TPM= 19.92 Transcript Type= protein_coding chr10 97222173 97292656 97222173 97292656 - ENST00000358531.8@ARHGAP19 ENST00000358531.8 protein_coding 97292572,97265860,97264826,97263420,97259402,97256318,97246272,97243968,97235217,97229764,97229147,97222173 97292656,97266125,97264906,97263629,97259628,97256404,97246337,97244159,97235315,97229874,97229225,97226132 Gene ID= ENSG00000213390.10 TPM= 5.73 Transcript Type= protein_coding chr10 97222176 97292673 97222176 97292673 - ENST00000358308.7@ARHGAP19 ENST00000358308.7 protein_coding 97292572,97265860,97264826,97263420,97259402,97246272,97243968,97235217,97229764,97229147,97222176 97292673,97266125,97264906,97263629,97259628,97246337,97244159,97235315,97229874,97229225,97226132 Gene ID= ENSG00000213390.10 TPM= 1.2 Transcript Type= protein_coding chr10 97222180 97256515 97222180 97256515 - ENST00000487035.1@ARHGAP19 ENST00000487035.1 protein_coding 97256463,97246272,97243968,97235217,97229764,97229147,97222180 97256515,97246337,97244159,97235315,97229874,97229225,97226132 Gene ID= ENSG00000213390.10 TPM= 1.2 Transcript Type= processed_transcript chr10 97426160 97433441 97426160 97433441 + ENST00000334828.5@PGAM1 ENST00000334828.5 protein_coding 97426160,97430379,97430955,97432355 97426446,97430653,97431135,97433441 Gene ID= ENSG00000171314.8 TPM= 1283.61 Transcript Type= protein_coding chr10 97436142 97446017 97436142 97446017 - ENST00000370902.7@EXOSC1 ENST00000370902.7 protein_coding 97445955,97445732,97443237,97441171,97438670,97437700,97437191,97436142 97446017,97445847,97443311,97441259,97438703,97437750,97437275,97436551 Gene ID= ENSG00000171311.12 TPM= 23.54 Transcript Type= protein_coding chr10 97436248 97445993 97436248 97445993 - ENST00000370885.8@EXOSC1 ENST00000370885.8 protein_coding 97445955,97445732,97441171,97438670,97437700,97437191,97436248 97445993,97445847,97441259,97438703,97437750,97437275,97436551 Gene ID= ENSG00000171311.12 TPM= 2.72 Transcript Type= protein_coding chr10 97446143 97457370 97446143 97457370 + transcript2287.chr10.nic@ZDHHC16 transcript2287.chr10.nic protein_coding 97446143,97451671,97452090,97452415,97452807,97453530,97453799,97454714,97455660,97455974,97456777 97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457370 Gene ID= ENSG00000171307.18 TPM= 2.9 Transcript Type= NA chr10 97446143 97457370 97446143 97457370 + transcript2298.chr10.nic@ZDHHC16 transcript2298.chr10.nic protein_coding 97446143,97451671,97452090,97452415,97453799,97454714,97455660,97455974,97456777 97446353,97451918,97452284,97453663,97453846,97454799,97455783,97456044,97457370 Gene ID= ENSG00000171307.18 TPM= 1.81 Transcript Type= NA chr10 97446170 97457366 97446170 97457366 + ENST00000370854.7@ZDHHC16 ENST00000370854.7 protein_coding 97446170,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777 97446353,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457366 Gene ID= ENSG00000171307.18 TPM= 18.29 Transcript Type= protein_coding chr10 97446204 97457366 97446204 97457366 + ENST00000353979.7@ZDHHC16 ENST00000353979.7 protein_coding 97446204,97451671,97452090,97452415,97453618,97453799,97454714,97455660,97455974,97456777 97446353,97451918,97452284,97452503,97453663,97453846,97454799,97455783,97456044,97457366 Gene ID= ENSG00000171307.18 TPM= 5.61 Transcript Type= protein_coding chr10 97446131 97457363 97446131 97457363 + ENST00000393760.5@ZDHHC16 ENST00000393760.5 protein_coding 97446131,97450357,97451671,97452090,97452415,97452895,97453530,97453799,97454714,97455660,97455974,97456777 97446353,97450536,97451918,97452284,97452503,97452923,97453663,97453846,97454799,97455783,97456044,97457363 Gene ID= ENSG00000171307.18 TPM= 6.52 Transcript Type= protein_coding chr10 97446202 97457366 97446202 97457366 + ENST00000352634.8@ZDHHC16 ENST00000352634.8 protein_coding 97446202,97451671,97452090,97452415,97452895,97453530,97454714,97455660,97455974,97456777 97446353,97451918,97452284,97452503,97452923,97453663,97454799,97455783,97456044,97457366 Gene ID= ENSG00000171307.18 TPM= 8.33 Transcript Type= protein_coding chr10 97457590 97498437 97457590 97498437 - transcript2270.chr10.nic@MMS19 transcript2270.chr10.nic protein_coding 97498273,97484103,97480942,97480241,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97457590 97498437,97484151,97481042,97480357,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719 Gene ID= ENSG00000155229.20 TPM= 7.7 Transcript Type= NA chr10 97457590 97498403 97457590 97498403 - transcript2276.chr10.nic@MMS19 transcript2276.chr10.nic protein_coding 97498273,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97457590 97498403,97481042,97478389,97477929,97477416,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466159,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719 Gene ID= ENSG00000155229.20 TPM= 9.51 Transcript Type= NA chr10 97458324 97498388 97458324 97498388 - ENST00000415383.5@MMS19 ENST00000415383.5 protein_coding 97498273,97480942,97478304,97477855,97477347,97476835,97476683,97470775,97470129,97469646,97468966,97468252,97467505,97466776,97466504,97466059,97465805,97463858,97462583,97462017,97461828,97461496,97460907,97460695,97460046,97459659,97459362,97459223,97458800,97458324 97498388,97481042,97478389,97477929,97477404,97476963,97476744,97470861,97470203,97469723,97469104,97468406,97467583,97466901,97466585,97466156,97465954,97464013,97462682,97462119,97461896,97461622,97461007,97460751,97460232,97459741,97459526,97459282,97458900,97458719 Gene ID= ENSG00000155229.20 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr10 97498868 97571209 97498868 97571209 + ENST00000370664.3@UBTD1 ENST00000370664.3 protein_coding 97498868,97567914,97570138 97499273,97568141,97571209 Gene ID= ENSG00000165886.4 TPM= 34.41 Transcript Type= protein_coding chr10 97584343 97612802 97584343 97612802 + ENST00000370646.8@HOGA1 ENST00000370646.8 protein_coding 97584343,97598775,97599089,97599680,97600067,97601857,97611510 97584914,97598903,97599216,97599814,97600163,97601990,97612802 Gene ID= ENSG00000241935.8 TPM= 41.95 Transcript Type= protein_coding chr10 97584343 97612802 97584343 97612802 + ENST00000370647.8@HOGA1 ENST00000370647.8 protein_coding 97584343,97601857,97611510 97584914,97601990,97612802 Gene ID= ENSG00000241935.8 TPM= 9.35 Transcript Type= protein_coding chr10 97614554 97633500 97614554 97633500 - transcript2338.chr10.nnic@MORN4 transcript2338.chr10.nnic protein_coding 97633347,97617208,97616678,97614554 97633500,97617322,97616787,97616411 Gene ID= ENSG00000171160.17 TPM= 2.26 Transcript Type= NA chr10 97614553 97633480 97614553 97633480 - ENST00000307450.10@MORN4 ENST00000307450.10 protein_coding 97633347,97619587,97617208,97616678,97614553 97633480,97619683,97617322,97616787,97616411 Gene ID= ENSG00000171160.17 TPM= 6.79 Transcript Type= protein_coding chr10 97619410 97633491 97619410 97633491 - ENST00000370635.3@MORN4 ENST00000370635.3 protein_coding 97633347,97619410 97633491,97619683 Gene ID= ENSG00000171160.17 TPM= 1.81 Transcript Type= protein_coding chr10 97640686 97676434 97640686 97676434 + ENST00000370631.3@PI4K2A ENST00000370631.3 protein_coding 97640686,97650941,97656285,97656821,97662907,97664885,97666438,97667061,97673581 97641177,97651141,97656416,97656974,97662968,97664984,97666571,97667120,97676434 Gene ID= ENSG00000155252.13 TPM= 156.66 Transcript Type= protein_coding chr10 97677424 97687323 97677424 97687323 - ENST00000370626.3@AVPI1 ENST00000370626.3 protein_coding 97686766,97679619,97677424 97687323,97679915,97678025 Gene ID= ENSG00000119986.6 TPM= 36.22 Transcript Type= protein_coding chr10 97713724 97718152 97713724 97718152 + ENST00000285605.7@MARVELD1 ENST00000285605.7 protein_coding 97713724,97717194 97715985,97718152 Gene ID= ENSG00000155254.12 TPM= 34.41 Transcript Type= protein_coding chr10 97737123 97760907 97737123 97760907 + ENST00000393677.8@ZFYVE27 ENST00000393677.8 protein_coding 97737123,97738477,97743094,97744729,97748269,97749474,97750331,97751391,97752857,97753038,97757265,97757642,97759236 97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97752877,97753182,97757311,97757723,97760907 Gene ID= ENSG00000155256.17 TPM= 2.85 Transcript Type= protein_coding chr10 97737121 97760906 97737121 97760906 + ENST00000337540.11@ZFYVE27 ENST00000337540.11 protein_coding 97737121,97738477,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236 97737321,97738649,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760906 Gene ID= ENSG00000155256.17 TPM= 1.95 Transcript Type= protein_coding chr10 97737128 97760895 97737128 97760895 + ENST00000423811.3@ZFYVE27 ENST00000423811.3 protein_coding 97737128,97738477,97743094,97744729,97748269,97749474,97750331,97751376,97752857,97753038,97757265,97757642,97759236 97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97752877,97753182,97757311,97757723,97760895 Gene ID= ENSG00000155256.17 TPM= 14.62 Transcript Type= protein_coding chr10 97737140 97760895 97737140 97760895 + ENST00000359980.5@ZFYVE27 ENST00000359980.5 protein_coding 97737140,97738477,97743094,97744729,97748269,97749474,97750331,97751391,97753038,97757265,97757642,97759236 97737325,97738674,97743164,97744915,97748364,97749586,97750470,97751462,97753182,97757311,97757723,97760895 Gene ID= ENSG00000155256.17 TPM= 50.85 Transcript Type= protein_coding chr10 97766751 97771952 97766751 97771952 - ENST00000266066.3@SFRP5 ENST00000266066.3 protein_coding 97771305,97769668,97766751 97771952,97769745,97767860 Gene ID= ENSG00000120057.4 TPM= 1.81 Transcript Type= protein_coding chr10 98134637 98244896 98134637 98244896 + transcript2367.chr10.nnic@R3HCC1L transcript2367.chr10.nnic protein_coding 98134637,98162883,98163293,98208101,98231512,98234446,98235425,98236024,98244091 98134706,98162975,98163397,98209899,98231687,98234516,98235520,98236164,98244896 Gene ID= ENSG00000166024.13 TPM= 4.98 Transcript Type= NA chr10 98134671 98244897 98134671 98244897 + ENST00000298999.7@R3HCC1L ENST00000298999.7 protein_coding 98134671,98156093,98162883,98163293,98208101,98231512,98234446,98235425,98236024,98244091 98134706,98156147,98162975,98163397,98209899,98231687,98234516,98235520,98236164,98244897 Gene ID= ENSG00000166024.13 TPM= 2.26 Transcript Type= protein_coding chr10 98247686 98268195 98247686 98268195 - transcript2371.chr10.nnic@LOXL4 transcript2371.chr10.nnic protein_coding 98268132,98267631,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247686 98268195,98267822,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991 Gene ID= ENSG00000138131.3 TPM= 3.62 Transcript Type= NA chr10 98247690 98268250 98247690 98268250 - ENST00000260702.3@LOXL4 ENST00000260702.3 protein_coding 98268132,98262743,98262035,98260922,98259391,98259009,98257981,98257650,98256780,98255577,98253553,98252353,98251566,98251065,98247690 98268250,98263051,98262213,98261127,98259429,98259228,98258164,98257804,98256947,98255739,98253796,98252468,98251702,98251176,98248991 Gene ID= ENSG00000138131.3 TPM= 21.73 Transcript Type= protein_coding chr10 98383566 98415225 98383566 98415225 - transcript2409.chr10.nnic@PYROXD2 transcript2409.chr10.nnic protein_coding 98415009,98410939,98407904,98407582,98400102,98397345,98395391,98395196,98392942,98392432,98391010,98390598,98388354,98387201,98384947,98383566 98415225,98410958,98407997,98407655,98400257,98397498,98395452,98395293,98393083,98392566,98391082,98390754,98388508,98387307,98385184,98383868 Gene ID= ENSG00000119943.12 TPM= 2.72 Transcript Type= NA chr10 98383566 98415225 98383566 98415225 - transcript2411.chr10.nic@PYROXD2 transcript2411.chr10.nic protein_coding 98415009,98410939,98407904,98407582,98400102,98397345,98395391,98395196,98392942,98392432,98391010,98390598,98387201,98384947,98383566 98415225,98410958,98407997,98407655,98400257,98397498,98395452,98395293,98393083,98392566,98391082,98390754,98387307,98385067,98383868 Gene ID= ENSG00000119943.12 TPM= 2.72 Transcript Type= NA chr10 98402399 98415163 98402399 98415163 - transcript2422.chr10.nnic@PYROXD2 transcript2422.chr10.nnic protein_coding 98415009,98410939,98407904,98407582,98402399 98415163,98410958,98407997,98407655,98403931 Gene ID= ENSG00000119943.12 TPM= 1.81 Transcript Type= NA chr10 98413951 98417298 98413951 98417298 - transcript2423.chr10.nnic@PYROXD2 transcript2423.chr10.nnic protein_coding 98415549,98415009,98414732,98413951 98417298,98415197,98414834,98414295 Gene ID= ENSG00000119943.12 TPM= 2.72 Transcript Type= NA chr10 98383565 98415184 98383565 98415184 - ENST00000370575.4@PYROXD2 ENST00000370575.4 protein_coding 98415009,98410939,98407904,98407582,98400102,98397345,98395391,98395196,98392942,98392432,98391010,98390598,98388354,98387201,98384947,98383565 98415184,98410958,98407997,98407655,98400257,98397498,98395452,98395293,98393083,98392566,98391082,98390754,98388508,98387307,98385067,98383868 Gene ID= ENSG00000119943.12 TPM= 18.11 Transcript Type= protein_coding chr10 98413951 98446957 98413951 98446957 - transcript2383.chr10.nic@HPS1 transcript2383.chr10.nic protein_coding 98446807,98445300,98443124,98435635,98435272,98433940,98431131,98430571,98429791,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98413951 98446957,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429889,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726 Gene ID= ENSG00000107521.18 TPM= 7.91 Transcript Type= NA chr10 98413951 98446955 98413951 98446955 - transcript2387.chr10.nnic@HPS1 transcript2387.chr10.nnic protein_coding 98446887,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429791,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98413951 98446955,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429889,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726 Gene ID= ENSG00000107521.18 TPM= 19.69 Transcript Type= NA chr10 98413951 98446957 98413951 98446957 - transcript2393.chr10.nic@HPS1 transcript2393.chr10.nic protein_coding 98446807,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98413951 98446957,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726 Gene ID= ENSG00000107521.18 TPM= 15 Transcript Type= NA chr10 98413951 98446955 98413951 98446955 - transcript2394.chr10.nnic@HPS1 transcript2394.chr10.nnic protein_coding 98446887,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429573,98427215,98425818,98425541,98424313,98423753,98423603,98422369,98420045,98418175,98413951 98446955,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429642,98427264,98425985,98425720,98424374,98423887,98423668,98422513,98420158,98418257,98417726 Gene ID= ENSG00000107521.18 TPM= 5.95 Transcript Type= NA chr10 98429151 98446913 98429151 98446913 - ENST00000338546.9@HPS1 ENST00000338546.9 protein_coding 98446807,98445300,98443124,98435635,98435272,98433983,98431131,98430571,98429791,98429151 98446913,98445413,98443240,98435772,98435414,98434091,98431291,98430670,98429889,98429642 Gene ID= ENSG00000107521.18 TPM= 5.43 Transcript Type= protein_coding chr10 98442388 98446927 98442388 98446927 - ENST00000465957.1@HPS1 ENST00000465957.1 protein_coding 98446807,98445300,98443124,98442388 98446927,98445413,98443240,98442957 Gene ID= ENSG00000107521.18 TPM= 2.72 Transcript Type= processed_transcript chr10 99329099 99394330 99329099 99394330 + ENST00000356713.4@CNNM1 ENST00000356713.4 protein_coding 99329099,99357512,99360835,99362227,99364417,99364955,99377055,99387820,99388152,99390306,99391437 99330960,99357655,99360975,99362396,99364516,99365002,99377218,99388003,99388301,99390407,99394330 Gene ID= ENSG00000119946.10 TPM= 1.81 Transcript Type= protein_coding chr10 99396871 99431509 99396871 99431509 - transcript2434.chr10.nnic@GOT1 transcript2434.chr10.nnic protein_coding 99430653,99420624,99406726,99406137,99405756,99403724,99403469,99402580,99396871 99431509,99420805,99406849,99406249,99405860,99403874,99403634,99402722,99397686 Gene ID= ENSG00000120053.10 TPM= 3.62 Transcript Type= NA chr10 99396870 99430593 99396870 99430593 - ENST00000370508.5@GOT1 ENST00000370508.5 protein_coding 99430448,99420624,99406726,99406137,99405756,99403724,99403469,99402580,99396870 99430593,99420805,99406849,99406249,99405860,99403874,99403634,99402722,99397686 Gene ID= ENSG00000120053.10 TPM= 41.66 Transcript Type= protein_coding chr10 99610521 99620464 99610521 99620464 - transcript2436.chr10.nnic@SLC25A28 transcript2436.chr10.nnic protein_coding 99619727,99613696,99612543,99610521 99620464,99613924,99612599,99611366 Gene ID= ENSG00000155287.10 TPM= 2.72 Transcript Type= NA chr10 99610521 99620480 99610521 99620480 - transcript2445.chr10.nic@SLC25A28 transcript2445.chr10.nic protein_coding 99620045,99612543,99610521 99620480,99613924,99611366 Gene ID= ENSG00000155287.10 TPM= 9.06 Transcript Type= NA chr10 99610522 99620364 99610522 99620364 - ENST00000370495.5@SLC25A28 ENST00000370495.5 protein_coding 99620045,99613696,99612543,99610522 99620364,99613924,99612599,99611366 Gene ID= ENSG00000155287.10 TPM= 1.81 Transcript Type= protein_coding chr10 99732213 99756133 99732213 99756133 + transcript2460.chr10.nnic@CUTC transcript2460.chr10.nnic protein_coding 99732213,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625 99732356,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756133 Gene ID= ENSG00000119929.12 TPM= 1.81 Transcript Type= NA chr10 99732220 99756134 99732220 99756134 + ENST00000370476.9@CUTC ENST00000370476.9 protein_coding 99732220,99736246,99739710,99743153,99744037,99747257,99750369,99754529,99755625 99732409,99736317,99739769,99743362,99744072,99747390,99750396,99754634,99756134 Gene ID= ENSG00000119929.12 TPM= 19.92 Transcript Type= protein_coding chr10 99711848 99732126 99711848 99732126 - transcript2462.chr10.nnic@COX15 transcript2462.chr10.nnic protein_coding 99731960,99729553,99727441,99726968,99723956,99720987,99716348,99711848 99732126,99729734,99727563,99727154,99724123,99721068,99716461,99714718 Gene ID= ENSG00000014919.12 TPM= 7.24 Transcript Type= NA chr10 99711844 99732100 99711844 99732100 - ENST00000370483.9@COX15 ENST00000370483.9 protein_coding 99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99711844 99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99713479 Gene ID= ENSG00000014919.12 TPM= 13.58 Transcript Type= protein_coding chr10 99713515 99732100 99713515 99732100 - ENST00000016171.5@COX15 ENST00000016171.5 protein_coding 99731960,99729553,99727441,99726968,99723956,99720987,99718346,99716348,99713515 99732100,99729734,99727563,99727154,99724123,99721068,99718500,99716461,99714718 Gene ID= ENSG00000014919.12 TPM= 37.13 Transcript Type= protein_coding chr10 99875577 100009919 99875577 100009919 - ENST00000324109.8@DNMBP ENST00000324109.8 protein_coding 100009838,99971980,99969115,99955214,99908953,99907995,99899919,99898743,99898086,99896267,99894946,99888825,99886300,99885687,99884011,99879811,99875577 100009919,99972134,99969237,99957205,99909146,99908094,99900066,99898760,99898285,99896397,99895050,99888953,99886632,99885866,99884209,99880361,99877336 Gene ID= ENSG00000107554.16 TPM= 3.62 Transcript Type= protein_coding chr10 100150091 100186024 100150091 100186024 - transcript2468.chr10.nic@ERLIN1 transcript2468.chr10.nic protein_coding 100185904,100185514,100183756,100179201,100178133,100175945,100174208,100167348,100164004,100156145,100154860,100150091 100186024,100185637,100183837,100179247,100178194,100176070,100174281,100167406,100164095,100156234,100154939,100152352 Gene ID= ENSG00000107566.13 TPM= 6.34 Transcript Type= NA chr10 100150094 100188334 100150094 100188334 - ENST00000421367.6@ERLIN1 ENST00000421367.6 protein_coding 100185514,100183756,100179201,100178133,100175945,100174208,100167348,100164004,100156145,100154860,100150094 100188334,100183837,100179247,100178194,100176070,100174281,100167406,100164095,100156234,100154939,100152352 Gene ID= ENSG00000107566.13 TPM= 4.53 Transcript Type= protein_coding chr10 100188298 100229619 100188298 100229619 - ENST00000370397.7@CHUK ENST00000370397.7 protein_coding 100229428,100225923,100222866,100222112,100220588,100219270,100219008,100218718,100217995,100209595,100207230,100205076,100204506,100202088,100200671,100199971,100194425,100193984,100193298,100190869,100188298 100229619,100226017,100222980,100222181,100220676,100219359,100219132,100218825,100218130,100209789,100207332,100205199,100204657,100202149,100200780,100200020,100194521,100194131,100193431,100190968,100189627 Gene ID= ENSG00000213341.10 TPM= 27.17 Transcript Type= protein_coding chr10 100232297 100267676 100232297 100267676 - transcript2486.chr10.nic@CWF19L1 transcript2486.chr10.nic protein_coding 100267571,100256262,100253421,100250248,100246795,100245799,100243698,100238022,100236850,100235667,100232297 100267676,100256476,100253539,100250332,100246935,100245913,100243777,100238231,100236969,100235764,100233371 Gene ID= ENSG00000095485.17 TPM= 2.72 Transcript Type= NA chr10 100272795 100286680 100272795 100286680 - transcript2490.chr10.nic@BLOC1S2 transcript2490.chr10.nic protein_coding 100286605,100286097,100280934,100280124,100272795 100286680,100286332,100281053,100280228,100275493 Gene ID= ENSG00000196072.11 TPM= 4.53 Transcript Type= NA chr10 100274695 100286712 100274695 100286712 - ENST00000370372.6@BLOC1S2 ENST00000370372.6 protein_coding 100286605,100286097,100280934,100280124,100274695 100286712,100286213,100281053,100280228,100275493 Gene ID= ENSG00000196072.11 TPM= 42.56 Transcript Type= protein_coding chr10 100347124 100364834 100347124 100364834 + ENST00000370355.2@SCD ENST00000370355.2 protein_coding 100347124,100348064,100352366,100354427,100356532,100360734 100347531,100348346,100352496,100354632,100356764,100364834 Gene ID= ENSG00000099194.5 TPM= 412.02 Transcript Type= protein_coding chr10 100373513 100388360 100373513 100388360 + ENST00000641708.1@OLMALINC ENST00000641708.1 lincRNA 100373513,100380983,100381216,100388037 100374012,100381109,100381448,100388360 Gene ID= ENSG00000235823.2 TPM= 1.36 Transcript Type= lincRNA chr10 100373589 100382355 100373589 100382355 + transcript2509.chr10.nic@OLMALINC transcript2509.chr10.nic lincRNA 100373589,100380983,100381216 100374012,100381109,100382355 Gene ID= ENSG00000235823.2 TPM= 4.07 Transcript Type= NA chr10 100373544 100388357 100373544 100388357 + transcript2510.chr10.nic@OLMALINC transcript2510.chr10.nic lincRNA 100373544,100381216,100388037 100374012,100381448,100388357 Gene ID= ENSG00000235823.2 TPM= 11.77 Transcript Type= NA chr10 100373615 100383368 100373615 100383368 + ENST00000454935.1@OLMALINC ENST00000454935.1 lincRNA 100373615,100381216 100374012,100383368 Gene ID= ENSG00000235823.2 TPM= 6.34 Transcript Type= lincRNA chr10 100523740 100529864 100523740 100529864 - ENST00000299166.8@NDUFB8 ENST00000299166.8 protein_coding 100529767,100529380,100526975,100526399,100523740 100529864,100529506,100527074,100526554,100523929 Gene ID= ENSG00000166136.15 TPM= 204.2 Transcript Type= protein_coding chr10 100523743 100530000 100523743 100530000 - ENST00000370322.5@NDUFB8 ENST00000370322.5 protein_coding 100529858,100529380,100526975,100526399,100523743 100530000,100529506,100527074,100526554,100523929 Gene ID= ENSG00000166136.15 TPM= 4.07 Transcript Type= protein_coding chr10 100523740 100526598 100523740 100526598 - ENST00000464651.1@NDUFB8 ENST00000464651.1 protein_coding 100526399,100523740 100526598,100523929 Gene ID= ENSG00000166136.15 TPM= 4.53 Transcript Type= retained_intron chr10 100535939 100553922 100535939 100553922 + transcript2529.chr10.nic@HIF1AN transcript2529.chr10.nic protein_coding 100535939,100536411,100540634,100544951,100545943,100546518,100547140,100548093 100536050,100536661,100540782,100545096,100546049,100546581,100547250,100553922 Gene ID= ENSG00000166135.13 TPM= 19.92 Transcript Type= NA chr10 100912569 100965136 100912569 100965136 + ENST00000238961.8@SLF2 ENST00000238961.8 protein_coding 100912569,100915999,100916570,100918384,100923975,100925949,100929317,100929830,100930976,100937402,100938595,100944026,100945330,100947039,100947760,100950076,100950676,100956451,100959428,100961877 100913250,100916042,100917300,100918441,100924972,100926019,100929439,100929997,100931078,100937477,100938736,100944128,100945506,100947136,100947847,100950207,100950753,100956537,100959496,100965136 Gene ID= ENSG00000119906.11 TPM= 9.96 Transcript Type= protein_coding chr10 100977821 100987497 100977821 100987497 - ENST00000318325.6@MRPL43 ENST00000318325.6 protein_coding 100987313,100987090,100986749,100983755,100977821 100987497,100987196,100986975,100983817,100979372 Gene ID= ENSG00000055950.16 TPM= 2.72 Transcript Type= protein_coding chr10 100981376 100987494 100981376 100987494 - ENST00000299179.9@MRPL43 ENST00000299179.9 protein_coding 100987313,100987090,100986749,100983755,100981376 100987494,100987196,100986975,100983817,100981543 Gene ID= ENSG00000055950.16 TPM= 19.02 Transcript Type= protein_coding chr10 100981377 100987515 100981377 100987515 - ENST00000342071.5@MRPL43 ENST00000342071.5 protein_coding 100987313,100987090,100986749,100983948,100983755,100981377 100987515,100987196,100986975,100984074,100983817,100981543 Gene ID= ENSG00000055950.16 TPM= 9.06 Transcript Type= protein_coding chr10 100981376 100987433 100981376 100987433 - ENST00000448244.5@MRPL43 ENST00000448244.5 protein_coding 100987313,100987090,100986749,100984034,100983755,100981376 100987433,100987196,100986975,100984074,100983817,100981543 Gene ID= ENSG00000055950.16 TPM= 1.81 Transcript Type= protein_coding chr10 100986276 100987515 100986276 100987515 - ENST00000318364.12@MRPL43 ENST00000318364.12 protein_coding 100987313,100987090,100986276 100987515,100987196,100986975 Gene ID= ENSG00000055950.16 TPM= 78.18 Transcript Type= protein_coding chr10 100986274 100987483 100986274 100987483 - ENST00000370236.5@MRPL43 ENST00000370236.5 protein_coding 100987313,100987090,100986687,100986274 100987483,100987196,100986975,100986572 Gene ID= ENSG00000055950.16 TPM= 4.83 Transcript Type= protein_coding chr10 100986280 100987483 100986280 100987483 - ENST00000370234.4@MRPL43 ENST00000370234.4 protein_coding 100987313,100987090,100986749,100986280 100987483,100987196,100986975,100986572 Gene ID= ENSG00000055950.16 TPM= 6.64 Transcript Type= protein_coding chr10 100986276 100987286 100986276 100987286 - ENST00000493646.1@MRPL43 ENST00000493646.1 protein_coding 100987090,100986276 100987286,100986975 Gene ID= ENSG00000055950.16 TPM= 1.2 Transcript Type= processed_transcript chr10 100986276 100987515 100986276 100987515 - ENST00000477279.1@MRPL43 ENST00000477279.1 protein_coding 100987313,100986276 100987515,100986975 Gene ID= ENSG00000055950.16 TPM= 1.2 Transcript Type= protein_coding chr10 100969498 100985615 100969498 100985615 + transcript2535.chr10.nic@SEMA4G transcript2535.chr10.nic protein_coding 100969498,100972529,100973129,100973547,100977632,100978295,100978527,100978849,100979102,100979848,100980122,100980578,100980822,100981168,100983305,100984490 100969591,100973036,100973277,100973609,100977730,100978388,100978640,100979018,100979271,100979992,100980344,100980693,100980997,100981229,100984357,100985615 Gene ID= ENSG00000095539.15 TPM= 1.81 Transcript Type= NA chr10 100998533 101007836 100998533 101007836 + transcript2560.chr10.nic@LZTS2 transcript2560.chr10.nic protein_coding 100998533,101002497,101003507,101005458,101006485 100998981,101002946,101004166,101005715,101007836 Gene ID= ENSG00000107816.17 TPM= 15.85 Transcript Type= NA chr10 100998538 101007836 100998538 101007836 + transcript2562.chr10.nic@LZTS2 transcript2562.chr10.nic protein_coding 100998538,101002497,101003507,101005458,101006485 100999952,101002946,101004166,101005715,101007836 Gene ID= ENSG00000107816.17 TPM= 337.32 Transcript Type= NA chr10 100999779 101007836 100999779 101007836 + transcript2576.chr10.nic@LZTS2 transcript2576.chr10.nic protein_coding 100999779,101002497,101003507,101006485 100999952,101002946,101005715,101007836 Gene ID= ENSG00000107816.17 TPM= 16.15 Transcript Type= NA chr10 100999776 101007836 100999776 101007836 + transcript2578.chr10.nnic@LZTS2 transcript2578.chr10.nnic protein_coding 100999776,101002497,101005458,101006485 100999952,101002946,101005715,101007836 Gene ID= ENSG00000107816.17 TPM= 12.07 Transcript Type= NA chr10 100997072 101007836 100997072 101007836 + ENST00000370223.7@LZTS2 ENST00000370223.7 protein_coding 100997072,101002497,101003507,101005458,101006485 100997234,101002946,101004166,101005715,101007836 Gene ID= ENSG00000107816.17 TPM= 104.59 Transcript Type= protein_coding chr10 101354063 101557321 101354063 101557321 + ENST00000370187.7@BTRC ENST00000370187.7 protein_coding 101354063,101430345,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155 101354228,101430452,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557321 Gene ID= ENSG00000166167.17 TPM= 11.47 Transcript Type= protein_coding chr10 101354033 101557319 101354033 101557319 + ENST00000393441.8@BTRC ENST00000393441.8 protein_coding 101354033,101430345,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155 101354228,101430452,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557319 Gene ID= ENSG00000166167.17 TPM= 2.42 Transcript Type= protein_coding chr10 101354107 101557321 101354107 101557321 + ENST00000408038.6@BTRC ENST00000408038.6 protein_coding 101354107,101461981,101479368,101521639,101526013,101531237,101532295,101532952,101534661,101535354,101536543,101538293,101550699,101553155 101354228,101462058,101479457,101521870,101526199,101531333,101532432,101533070,101534910,101535472,101536653,101538371,101550891,101557321 Gene ID= ENSG00000166167.17 TPM= 5.13 Transcript Type= protein_coding chr10 101588288 101609668 101588288 101609668 + ENST00000370151.8@DPCD ENST00000370151.8 protein_coding 101588288,101594658,101600738,101601203,101608835,101609367 101588400,101594738,101600862,101601336,101608937,101609668 Gene ID= ENSG00000166171.12 TPM= 19.92 Transcript Type= protein_coding chr10 101588289 101609661 101588289 101609661 + transcript2607.chr10.nic@DPCD transcript2607.chr10.nic protein_coding 101588289,101594658,101600738,101601203,101609367 101588400,101594738,101600862,101601336,101609661 Gene ID= ENSG00000166171.12 TPM= 1.81 Transcript Type= NA chr10 101578877 101588258 101578877 101588258 - transcript2594.chr10.nic@POLL transcript2594.chr10.nic protein_coding 101588204,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578877 101588258,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817 Gene ID= ENSG00000166169.16 TPM= 5.68 Transcript Type= NA chr10 101578877 101588220 101578877 101588220 - transcript2595.chr10.nic@POLL transcript2595.chr10.nic protein_coding 101587885,101587246,101585862,101585316,101584878,101583508,101582763,101580248,101578877 101588220,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817 Gene ID= ENSG00000166169.16 TPM= 2.35 Transcript Type= NA chr10 101578877 101588258 101578877 101588258 - transcript2596.chr10.nic@POLL transcript2596.chr10.nic protein_coding 101588204,101587246,101585862,101585316,101584878,101583508,101582763,101580248,101578877 101588258,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817 Gene ID= ENSG00000166169.16 TPM= 5.07 Transcript Type= NA chr10 101578884 101588270 101578884 101588270 - ENST00000370162.7@POLL ENST00000370162.7 protein_coding 101587822,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578884 101588270,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817 Gene ID= ENSG00000166169.16 TPM= 2.06 Transcript Type= protein_coding chr10 101578882 101588209 101578882 101588209 - ENST00000299206.8@POLL ENST00000299206.8 protein_coding 101587885,101587246,101585862,101585316,101584602,101583508,101582763,101580248,101578882 101588209,101587406,101586156,101585478,101584919,101583681,101582891,101580416,101579817 Gene ID= ENSG00000166169.16 TPM= 2.06 Transcript Type= protein_coding chr10 101610665 101695191 101610665 101695191 - transcript2603.chr10.nnic@FBXW4 transcript2603.chr10.nnic protein_coding 101694381,101676341,101673488,101672915,101624745,101612337,101611628,101610665 101695191,101676436,101673673,101673047,101624810,101612477,101611769,101611410 Gene ID= ENSG00000107829.13 TPM= 7.7 Transcript Type= NA chr10 101610666 101695259 101610666 101695259 - ENST00000331272.7@FBXW4 ENST00000331272.7 protein_coding 101694381,101676341,101673488,101672915,101667886,101624745,101612337,101611628,101610666 101695259,101676436,101673673,101673047,101667980,101624810,101612477,101611769,101611410 Gene ID= ENSG00000107829.13 TPM= 42.11 Transcript Type= protein_coding chr10 101781325 101783413 101781325 101783413 - ENST00000370110.5@NPM3 ENST00000370110.5 protein_coding 101783273,101782839,101782478,101782258,101781727,101781325 101783413,101782924,101782597,101782351,101781854,101781632 Gene ID= ENSG00000107833.10 TPM= 1.81 Transcript Type= protein_coding chr10 101784444 101818452 101784444 101818452 - transcript2621.chr10.nic@MGEA5 transcript2621.chr10.nic protein_coding 101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797980,101792839,101791354,101790896,101787364,101784444 101818452,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154,101792943,101791439,101791088,101787523,101786587 Gene ID= ENSG00000198408.13 TPM= 4.98 Transcript Type= NA chr10 101784443 101818418 101784443 101818418 - ENST00000361464.7@MGEA5 ENST00000361464.7 protein_coding 101817824,101813555,101813030,101810184,101807730,101806045,101803735,101800242,101798842,101797980,101793913,101792839,101791354,101790896,101787364,101784443 101818418,101813606,101813127,101810314,101807901,101806143,101804019,101800400,101799455,101798154,101793998,101792943,101791439,101791088,101787523,101786587 Gene ID= ENSG00000198408.13 TPM= 8.6 Transcript Type= protein_coding chr10 101845598 102011797 101845598 102011797 - transcript2639.chr10.nnic@C10orf76 transcript2639.chr10.nnic protein_coding 102011723,102009374,102006540,101995297,101993538,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101845598 102011797,102009449,102006633,101995355,101993603,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620 Gene ID= ENSG00000120029.12 TPM= 4.07 Transcript Type= NA chr10 101845599 102056193 101845599 102056193 - ENST00000370033.8@C10orf76 ENST00000370033.8 protein_coding 102056085,102040013,102033283,102033026,102029638,102025156,102023675,102023477,102013968,102012833,102011723,102009977,102009374,102006540,102001971,101995297,101993538,101991969,101990551,101975212,101957650,101956597,101939863,101889412,101849776,101845599 102056193,102040125,102033339,102033172,102029745,102025248,102023749,102023563,102014024,102012876,102011783,102010023,102009449,102006633,102002072,101995355,101993603,101992038,101990611,101975300,101957732,101956723,101939938,101889490,101849892,101847620 Gene ID= ENSG00000120029.12 TPM= 16.75 Transcript Type= protein_coding chr10 102029448 102056193 102029448 102056193 - ENST00000311122.5@C10orf76 ENST00000311122.5 protein_coding 102056085,102040013,102033283,102033026,102029448 102056193,102040125,102033339,102033172,102029745 Gene ID= ENSG00000120029.12 TPM= 3.62 Transcript Type= protein_coding chr10 102107511 102120492 102107511 102120492 - transcript2646.chr10.nnic@LDB1 transcript2646.chr10.nnic protein_coding 102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109035,102107511 102120492,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323 Gene ID= ENSG00000198728.10 TPM= 5.43 Transcript Type= NA chr10 102107510 102120492 102107510 102120492 - transcript2647.chr10.nic@LDB1 transcript2647.chr10.nic protein_coding 102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102107510 102120492,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177 Gene ID= ENSG00000198728.10 TPM= 5.43 Transcript Type= NA chr10 102107560 102114946 102107560 102114946 - ENST00000361198.9@LDB1 ENST00000361198.9 protein_coding 102114406,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109029,102107560 102114946,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323 Gene ID= ENSG00000198728.10 TPM= 4.53 Transcript Type= protein_coding chr10 102107583 102120453 102107583 102120453 - ENST00000425280.1@LDB1 ENST00000425280.1 protein_coding 102120086,102111434,102111256,102111069,102110869,102110529,102109921,102109600,102109384,102109029,102107583 102120453,102111536,102111300,102111144,102110971,102110701,102110043,102109683,102109507,102109177,102108323 Gene ID= ENSG00000198728.10 TPM= 9.96 Transcript Type= protein_coding chr10 102133030 102150325 102133030 102150325 + ENST00000278070.6@PPRC1 ENST00000278070.6 protein_coding 102133030,102137850,102138619,102138879,102139100,102143045,102144250,102145020,102146672,102148372,102148628,102148817,102149178,102149926 102133221,102138038,102138765,102138980,102142004,102143098,102144307,102145090,102147392,102148521,102148694,102148938,102149329,102150325 Gene ID= ENSG00000148840.10 TPM= 5.43 Transcript Type= protein_coding chr10 102152176 102163871 102152176 102163871 + ENST00000405356.5@NOLC1 ENST00000405356.5 protein_coding 102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111 102152530,102157074,102157328,102157555,102158214,102159338,102159568,102160024,102160343,102161093,102161662,102161925,102163871 Gene ID= ENSG00000166197.16 TPM= 5.28 Transcript Type= protein_coding chr10 102152176 102163866 102152176 102163866 + ENST00000605788.5@NOLC1 ENST00000605788.5 protein_coding 102152176,102157019,102157189,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111 102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102163866 Gene ID= ENSG00000166197.16 TPM= 37.88 Transcript Type= protein_coding chr10 102152404 102162600 102152404 102162600 + ENST00000488254.6@NOLC1 ENST00000488254.6 protein_coding 102152404,102157019,102157186,102157431,102158049,102159193,102159433,102159896,102160233,102160452,102161556,102161833,102162111 102152530,102157074,102157328,102157555,102158214,102159308,102159568,102160024,102160343,102161093,102161662,102161925,102162600 Gene ID= ENSG00000166197.16 TPM= 2.11 Transcript Type= protein_coding chr10 102245532 102382899 102245532 102382899 + ENST00000369983.3@GBF1 ENST00000369983.3 protein_coding 102245532,102258929,102260050,102344051,102351256,102351843,102352458,102353600,102358039,102358506,102359270,102360184,102361022,102361718,102362475,102363256,102363710,102365397,102366383,102367085,102367478,102368218,102368739,102369211,102369711,102369861,102370174,102370384,102370707,102375359,102376272,102376560,102376935,102379284,102379521,102379853,102380249,102380506,102381127,102382056 102245781,102259034,102260116,102344182,102351374,102351951,102352518,102353654,102358186,102358729,102359435,102360395,102361120,102361912,102362664,102363396,102363798,102365599,102366506,102367210,102367560,102368454,102368832,102369387,102369775,102369984,102370245,102370478,102370860,102375584,102376432,102376800,102377140,102379434,102379651,102379954,102380362,102380686,102381255,102382899 Gene ID= ENSG00000107862.4 TPM= 7.24 Transcript Type= protein_coding chr10 102394110 102402529 102394110 102402529 + ENST00000428099.5@NFKB2 ENST00000428099.5 protein_coding 102394110,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255 102394600,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402529 Gene ID= ENSG00000077150.18 TPM= 9.35 Transcript Type= protein_coding chr10 102395653 102402525 102395653 102402525 + transcript2673.chr10.nic@NFKB2 transcript2673.chr10.nic protein_coding 102395653,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402252 102395796,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402525 Gene ID= ENSG00000077150.18 TPM= 7.24 Transcript Type= NA chr10 102395646 102402525 102395646 102402525 + transcript2675.chr10.nic@NFKB2 transcript2675.chr10.nic protein_coding 102395646,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402252 102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402525 Gene ID= ENSG00000077150.18 TPM= 4.53 Transcript Type= NA chr10 102395706 102402524 102395706 102402524 + ENST00000189444.10@NFKB2 ENST00000189444.10 protein_coding 102395706,102395888,102396253,102396449,102396725,102396904,102397302,102397527,102397981,102398212,102398385,102398739,102399288,102399577,102400080,102400278,102400655,102400947,102401180,102401449,102401745,102402048,102402255 102395796,102395980,102396334,102396489,102396823,102397055,102397408,102397685,102398085,102398297,102398523,102398864,102399497,102399718,102400194,102400491,102400824,102401049,102401331,102401518,102401917,102402159,102402524 Gene ID= ENSG00000077150.18 TPM= 12.07 Transcript Type= protein_coding chr10 102420803 102423141 102420803 102423141 + transcript2683.chr10.nic@FBXL15 transcript2683.chr10.nic protein_coding 102420803,102421052,102421354,102421787,102422804 102420957,102421182,102421507,102422292,102423141 Gene ID= ENSG00000107872.12 TPM= 28.98 Transcript Type= NA chr10 102421185 102423141 102421185 102423141 + transcript2686.chr10.nic@FBXL15 transcript2686.chr10.nic protein_coding 102421185,102421787,102422804 102421507,102422292,102423141 Gene ID= ENSG00000107872.12 TPM= 42.56 Transcript Type= NA chr10 102423245 102432661 102423245 102432661 - ENST00000369937.4@CUEDC2 ENST00000369937.4 protein_coding 102432526,102425115,102424649,102424499,102424264,102423996,102423798,102423657,102423245 102432661,102425198,102424792,102424560,102424394,102424178,102423859,102423717,102423572 Gene ID= ENSG00000107874.10 TPM= 126.32 Transcript Type= protein_coding chr10 102449837 102456295 102449837 102456295 + transcript2696.chr10.nic@RPARP-AS1 transcript2696.chr10.nic processed_transcript 102449837,102450187,102451399,102452090,102455337 102450022,102450330,102451555,102452187,102456295 Gene ID= ENSG00000269609.5 TPM= 2.72 Transcript Type= NA chr10 102449837 102456292 102449837 102456292 + transcript2697.chr10.nnic@RPARP-AS1 transcript2697.chr10.nnic processed_transcript 102449837,102450187,102451399,102455337 102450022,102450330,102451555,102456292 Gene ID= ENSG00000269609.5 TPM= 2.72 Transcript Type= NA chr10 102449831 102456297 102449831 102456297 + ENST00000473970.2@RPARP-AS1 ENST00000473970.2 processed_transcript 102449831,102450187,102455337 102450022,102450330,102456297 Gene ID= ENSG00000269609.5 TPM= 3.62 Transcript Type= lincRNA chr10 102449853 102456293 102449853 102456293 + ENST00000492465.2@RPARP-AS1 ENST00000492465.2 processed_transcript 102449853,102450187,102451399,102452090,102455337 102450022,102450360,102451555,102452187,102456293 Gene ID= ENSG00000269609.5 TPM= 2.72 Transcript Type= lincRNA chr10 102461395 102477043 102461395 102477043 + transcript2707.chr10.nnic@MFSD13A transcript2707.chr10.nnic protein_coding 102461395,102468955,102469993,102470665,102471273,102472854,102473570,102473819,102475722 102461450,102469197,102470075,102471117,102471396,102472950,102473741,102474012,102477043 Gene ID= ENSG00000138111.14 TPM= 1.81 Transcript Type= NA chr10 102461395 102477045 102461395 102477045 + ENST00000238936.8@MFSD13A ENST00000238936.8 protein_coding 102461395,102465982,102468955,102469993,102470665,102471273,102472854,102473570,102473819,102475722 102461450,102466087,102469197,102470075,102471117,102471396,102472950,102473741,102474012,102477045 Gene ID= ENSG00000138111.14 TPM= 1.81 Transcript Type= protein_coding chr10 102479229 102502711 102479229 102502711 - ENST00000369905.8@ACTR1A ENST00000369905.8 protein_coding 102502600,102490549,102489063,102488150,102485609,102484160,102483011,102482001,102481837,102481132,102479229 102502711,102490613,102489138,102488275,102485733,102484376,102483103,102482175,102481898,102481172,102480965 Gene ID= ENSG00000138107.12 TPM= 230.91 Transcript Type= protein_coding chr10 102642485 102658320 102642485 102658320 + transcript2723.chr10.nic@TRIM8 transcript2723.chr10.nic protein_coding 102642485,102654653,102655080,102656106,102656245,102656747 102645187,102654748,102655313,102656137,102656385,102658320 Gene ID= ENSG00000171206.13 TPM= 6.34 Transcript Type= NA chr10 102644496 102658407 102644496 102658407 + ENST00000302424.11@TRIM8 ENST00000302424.11 protein_coding 102644496,102654653,102655080,102656106,102656270,102656747 102645187,102654748,102655313,102656137,102656385,102658407 Gene ID= ENSG00000171206.13 TPM= 113.19 Transcript Type= protein_coding chr10 102676669 102714270 102676669 102714270 - transcript2733.chr10.nnic@ARL3 transcript2733.chr10.nnic protein_coding 102714148,102705346,102699373,102689893,102685816,102676669 102714270,102705489,102699489,102689943,102686001,102676941 Gene ID= ENSG00000138175.8 TPM= 1.81 Transcript Type= NA chr10 102673731 102714407 102673731 102714407 - ENST00000260746.5@ARL3 ENST00000260746.5 protein_coding 102714273,102705346,102699373,102689893,102685816,102673731 102714407,102705489,102699489,102689943,102686001,102676941 Gene ID= ENSG00000138175.8 TPM= 40.75 Transcript Type= protein_coding chr10 102714540 102743492 102714540 102743492 + ENST00000369893.9@SFXN2 ENST00000369893.9 protein_coding 102714540,102726612,102726987,102728431,102729319,102729723,102731723,102732152,102732859,102733554,102735862,102737663 102714681,102726797,102727157,102728529,102729394,102729808,102731783,102732218,102732908,102733603,102735909,102743492 Gene ID= ENSG00000156398.12 TPM= 1.81 Transcript Type= protein_coding chr10 102727659 102739189 102727659 102739189 + transcript2731.chr10.nic@SFXN2 transcript2731.chr10.nic protein_coding 102727659,102728431,102729319,102729723,102731723,102732152,102732859,102733554,102735862,102737663 102727791,102728529,102729394,102729808,102731783,102732218,102732908,102733603,102735909,102739189 Gene ID= ENSG00000156398.12 TPM= 1.81 Transcript Type= NA chr10 102743970 102816240 102743970 102816240 + ENST00000448841.5@WBP1L ENST00000448841.5 protein_coding 102743970,102797993,102809893,102812595 102744143,102798095,102810054,102816240 Gene ID= ENSG00000166272.16 TPM= 43.92 Transcript Type= protein_coding chr10 102776249 102816267 102776249 102816267 + ENST00000369889.5@WBP1L ENST00000369889.5 protein_coding 102776249,102797993,102809893,102812595 102776417,102798095,102810054,102816267 Gene ID= ENSG00000166272.16 TPM= 56.6 Transcript Type= protein_coding chr10 102830531 102837472 102830531 102837472 - ENST00000638971.1@CYP17A1 ENST00000638971.1 protein_coding 102837065,102835254,102834785,102832993,102832511,102831508,102830531 102837472,102835392,102835014,102833208,102832680,102831611,102830985 Gene ID= ENSG00000148795.6 TPM= 571.4 Transcript Type= protein_coding chr10 102830531 102837472 102830531 102837472 - ENST00000638190.1@CYP17A1 ENST00000638190.1 protein_coding 102837065,102835254,102834785,102832511,102831508,102830531 102837472,102835392,102835014,102832680,102831611,102830985 Gene ID= ENSG00000148795.6 TPM= 146.7 Transcript Type= protein_coding chr10 102830609 102837422 102830609 102837422 - ENST00000639393.1@CYP17A1 ENST00000639393.1 protein_coding 102837065,102835254,102834785,102834036,102832993,102832511,102831508,102830609 102837422,102835392,102835014,102834122,102833208,102832680,102831614,102830985 Gene ID= ENSG00000148795.6 TPM= 3.4 Transcript Type= protein_coding chr10 102869501 102901897 102869501 102901897 + transcript2817.chr10.nnic@AS3MT transcript2817.chr10.nnic protein_coding 102869501,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102890656,102900593,102901478 102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890654,102890678,102900769,102901897 Gene ID= ENSG00000214435.7 TPM= 9.13 Transcript Type= NA chr10 102869477 102904396 102869477 102904396 + transcript2820.chr10.nnic@AS3MT transcript2820.chr10.nnic protein_coding 102869477,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102890656,102900593,102901453 102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890654,102890678,102900783,102904396 Gene ID= ENSG00000214435.7 TPM= 9.13 Transcript Type= NA chr10 102869501 102904678 102869501 102904678 + transcript2837.chr10.nnic@AS3MT transcript2837.chr10.nnic protein_coding 102869501,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102900593,102901478 102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890678,102900769,102904678 Gene ID= ENSG00000214435.7 TPM= 16.37 Transcript Type= NA chr10 102869501 102870570 102869501 102870570 + transcript2876.chr10.nnic@AS3MT transcript2876.chr10.nnic protein_coding 102869501,102869805,102870084,102870376 102869593,102869845,102870211,102870570 Gene ID= ENSG00000214435.7 TPM= 19.92 Transcript Type= NA chr10 102869296 102870570 102869296 102870570 + transcript2878.chr10.nic@AS3MT transcript2878.chr10.nic protein_coding 102869296,102869805,102870084 102869593,102869845,102870570 Gene ID= ENSG00000214435.7 TPM= 13.58 Transcript Type= NA chr10 102869516 102901894 102869516 102901894 + ENST00000615257.1@AS3MT ENST00000615257.1 protein_coding 102869516,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102890656,102900593,102901475 102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890654,102890678,102900799,102901894 Gene ID= ENSG00000214435.7 TPM= 86.25 Transcript Type= protein_coding chr10 102869516 102901899 102869516 102901899 + ENST00000369880.7@AS3MT ENST00000369880.7 protein_coding 102869516,102869805,102870084,102872448,102873097,102874592,102876954,102878379,102878849,102890544,102900593 102869593,102869845,102870211,102872598,102873233,102874661,102877035,102878510,102878991,102890678,102901899 Gene ID= ENSG00000214435.7 TPM= 60.67 Transcript Type= protein_coding chr10 102918286 102927606 102918286 102927606 + transcript2884.chr10.nnic@CNNM2 transcript2884.chr10.nnic protein_coding 102918286,102921027,102927345 102920101,102921115,102927606 Gene ID= ENSG00000148842.17 TPM= 4.53 Transcript Type= NA chr10 103088018 103193311 103088018 103193311 - transcript2898.chr10.nnic@NT5C2 transcript2898.chr10.nnic protein_coding 103193236,103181185,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088018 103193311,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908 Gene ID= ENSG00000076685.18 TPM= 11.55 Transcript Type= NA chr10 103088018 103193311 103088018 103193311 - transcript2899.chr10.nnic@NT5C2 transcript2899.chr10.nnic protein_coding 103193236,103181231,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088018 103193311,103181328,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908 Gene ID= ENSG00000076685.18 TPM= 6.11 Transcript Type= NA chr10 103088018 103146280 103088018 103146280 - transcript2901.chr10.nnic@NT5C2 transcript2901.chr10.nnic protein_coding 103146030,103139406,103111745,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088018 103146280,103139479,103111805,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908 Gene ID= ENSG00000076685.18 TPM= 3.4 Transcript Type= NA chr10 103088018 103193306 103088018 103193306 - ENST00000343289.9@NT5C2 ENST00000343289.9 protein_coding 103193236,103174858,103139406,103106589,103105706,103101235,103101045,103099926,103098931,103097291,103095939,103094348,103093972,103093139,103091564,103090936,103090611,103088018 103193306,103174982,103139479,103106706,103105801,103101326,103101102,103100019,103098984,103097374,103095980,103094455,103094038,103093309,103091615,103090996,103090787,103089908 Gene ID= ENSG00000076685.18 TPM= 11.55 Transcript Type= protein_coding chr10 103302796 103351134 103302796 103351134 - ENST00000369847.3@PCGF6 ENST00000369847.3 protein_coding 103350707,103348900,103348716,103347395,103347238,103345024,103333925,103326534,103314186,103302796 103351134,103348999,103348812,103347450,103347297,103345132,103333952,103326632,103314272,103303961 Gene ID= ENSG00000156374.14 TPM= 11.77 Transcript Type= protein_coding chr10 103367967 103389065 103367967 103389065 + ENST00000369839.3@TAF5 ENST00000369839.3 protein_coding 103367967,103373358,103378235,103379608,103379884,103381721,103383238,103385326,103387175,103387521,103388006 103368548,103373595,103378550,103379771,103380019,103381841,103383367,103385490,103387352,103387698,103389065 Gene ID= ENSG00000148835.10 TPM= 1.81 Transcript Type= protein_coding chr10 103389050 103396466 103389050 103396466 - ENST00000309579.7@USMG5 ENST00000309579.7 protein_coding 103396409,103392371,103392191,103389050 103396466,103392466,103392283,103389166 Gene ID= ENSG00000173915.14 TPM= 191.98 Transcript Type= protein_coding chr10 103389050 103396441 103389050 103396441 - ENST00000369815.5@USMG5 ENST00000369815.5 protein_coding 103396409,103395746,103392371,103392191,103389050 103396441,103396032,103392466,103392283,103389166 Gene ID= ENSG00000173915.14 TPM= 1.81 Transcript Type= protein_coding chr10 103389050 103396466 103389050 103396466 - ENST00000337003.4@USMG5 ENST00000337003.4 protein_coding 103396409,103394199,103392371,103392191,103389050 103396466,103394394,103392466,103392283,103389166 Gene ID= ENSG00000173915.14 TPM= 2.72 Transcript Type= protein_coding chr10 103396648 103446292 103396648 103446292 + ENST00000369797.7@PDCD11 ENST00000369797.7 protein_coding 103396648,103398416,103400397,103403118,103405022,103405985,103406609,103409699,103413116,103413966,103414270,103415005,103416491,103417792,103418440,103419538,103421348,103422988,103423543,103424984,103427329,103432129,103433948,103434248,103434798,103438015,103438686,103439746,103440290,103440734,103441826,103442213,103443165,103443915,103444517,103445378 103396730,103398528,103400528,103403285,103405183,103406108,103406790,103409806,103413322,103414090,103414330,103415151,103416742,103417932,103418634,103419708,103421567,103423137,103423658,103425525,103427391,103432234,103434037,103434350,103434975,103438071,103438808,103439868,103440581,103440850,103441975,103442460,103443333,103444068,103444682,103446292 Gene ID= ENSG00000148843.13 TPM= 21.73 Transcript Type= protein_coding chr10 103445721 103452420 103445721 103452420 - transcript2925.chr10.nnic@CALHM2 transcript2925.chr10.nnic protein_coding 103452156,103451083,103449400,103445721 103452420,103451182,103450099,103447568 Gene ID= ENSG00000138172.10 TPM= 5.66 Transcript Type= NA chr10 103445721 103452562 103445721 103452562 - transcript2927.chr10.nnic@CALHM2 transcript2927.chr10.nnic protein_coding 103452156,103451083,103449400,103445721 103452562,103451285,103450099,103447568 Gene ID= ENSG00000138172.10 TPM= 7.47 Transcript Type= NA chr10 103446784 103452408 103446784 103452408 - transcript2931.chr10.nic@CALHM2 transcript2931.chr10.nic protein_coding 103452156,103451083,103449387,103446784 103452408,103451182,103450800,103447568 Gene ID= ENSG00000138172.10 TPM= 2.87 Transcript Type= NA chr10 103445721 103452377 103445721 103452377 - transcript2936.chr10.nnic@CALHM2 transcript2936.chr10.nnic protein_coding 103451083,103449400,103445721 103452377,103450099,103447568 Gene ID= ENSG00000138172.10 TPM= 2.04 Transcript Type= NA chr10 103446784 103452408 103446784 103452408 - transcript2939.chr10.nnic@CALHM2 transcript2939.chr10.nnic protein_coding 103452156,103449387,103446784 103452408,103450099,103447568 Gene ID= ENSG00000138172.10 TPM= 5.04 Transcript Type= NA chr10 103446784 103452408 103446784 103452408 - transcript2940.chr10.nic@CALHM2 transcript2940.chr10.nic protein_coding 103452156,103449387,103446784 103452408,103450800,103447568 Gene ID= ENSG00000138172.10 TPM= 4.14 Transcript Type= NA chr10 103446789 103452318 103446789 103452318 - ENST00000260743.9@CALHM2 ENST00000260743.9 protein_coding 103452156,103451083,103449387,103446789 103452318,103451285,103450099,103447568 Gene ID= ENSG00000138172.10 TPM= 11.38 Transcript Type= protein_coding chr10 103446786 103452402 103446786 103452402 - ENST00000369788.7@CALHM2 ENST00000369788.7 protein_coding 103452156,103451083,103449387,103446786 103452402,103451182,103450099,103447568 Gene ID= ENSG00000138172.10 TPM= 29.49 Transcript Type= protein_coding chr10 103886363 103918184 103886363 103918184 - transcript2949.chr10.nnic@STN1 transcript2949.chr10.nnic protein_coding 103917462,103910527,103905091,103900062,103898877,103897548,103892130,103889072,103886363 103918184,103910622,103905156,103900223,103899000,103897719,103892252,103889144,103887728 Gene ID= ENSG00000107960.10 TPM= 1.81 Transcript Type= NA chr10 103882542 103918205 103882542 103918205 - ENST00000224950.7@STN1 ENST00000224950.7 protein_coding 103918100,103917462,103910527,103905091,103900062,103898877,103897548,103892130,103889072,103882542 103918205,103917656,103910622,103905156,103900223,103899000,103897719,103892252,103889144,103882841 Gene ID= ENSG00000107960.10 TPM= 24.45 Transcript Type= protein_coding chr10 103967101 104027584 103967101 104027584 + transcript2954.chr10.nnic@SLK transcript2954.chr10.nnic protein_coding 103967101,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104005561,104005912,104008177,104018160,104018784,104019734,104020488,104021620,104025574 103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104005691,104006035,104008356,104018289,104018908,104019922,104020613,104021733,104027584 Gene ID= ENSG00000065613.13 TPM= 5.89 Transcript Type= NA chr10 103967201 104029233 103967201 104029233 + ENST00000335753.8@SLK ENST00000335753.8 protein_coding 103967201,103990675,103992598,103992984,103998899,103999119,103999867,104001444,104002172,104005561,104005912,104008177,104018160,104018784,104019734,104020488,104021620,104025574 103967895,103990839,103992646,103993133,103998971,103999313,103999948,104001572,104003527,104005691,104006035,104008356,104018289,104018908,104019922,104020613,104021733,104029233 Gene ID= ENSG00000065613.13 TPM= 18.56 Transcript Type= protein_coding chr10 104122165 104126385 104122165 104126385 + ENST00000369727.3@SFR1 ENST00000369727.3 protein_coding 104122165,104122965,104123714,104125513 104122196,104123086,104124124,104126385 Gene ID= ENSG00000156384.14 TPM= 5.43 Transcript Type= protein_coding chr10 104122058 104126385 104122058 104126385 + ENST00000369729.7@SFR1 ENST00000369729.7 protein_coding 104122058,104122965,104123714,104125513 104122154,104123086,104124124,104126385 Gene ID= ENSG00000156384.14 TPM= 8.15 Transcript Type= protein_coding chr10 104254735 104267457 104254735 104267457 + ENST00000369713.9@GSTO1 ENST00000369713.9 protein_coding 104254735,104255163,104259576,104262979,104266084,104267252 104254962,104255271,104259798,104263077,104266190,104267457 Gene ID= ENSG00000148834.12 TPM= 123.61 Transcript Type= protein_coding chr10 104274912 104299417 104274912 104299417 + transcript2967.chr10.nic@GSTO2 transcript2967.chr10.nic protein_coding 104274912,104277894,104279370,104297578,104299128 104274949,104278116,104279471,104297684,104299417 Gene ID= ENSG00000065621.14 TPM= 1.81 Transcript Type= NA chr10 104312131 104338404 104312131 104338404 - ENST00000337478.2@ITPRIP ENST00000337478.2 protein_coding 104338246,104312131 104338404,104316064 Gene ID= ENSG00000148841.15 TPM= 23.54 Transcript Type= protein_coding chr10 104338533 104455097 104338533 104455097 + transcript2970.chr10.nnic@CFAP58 transcript2970.chr10.nnic protein_coding 104338533,104345556,104358341,104362023,104364733,104365814,104368423,104370895,104376811,104380029,104392233,104393329,104399360,104400680,104403729,104406689,104447698,104450071,104454422 104338661,104345699,104358622,104362171,104364799,104366008,104368560,104371054,104376893,104380220,104392394,104393475,104399500,104400903,104403840,104406793,104447817,104450204,104455097 Gene ID= ENSG00000120051.14 TPM= 2.72 Transcript Type= NA chr10 109864766 109923553 109864766 109923553 - ENST00000502935.5@XPNPEP1 ENST00000502935.5 protein_coding 109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864766 109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312 Gene ID= ENSG00000108039.17 TPM= 39.69 Transcript Type= protein_coding chr10 109864765 109923490 109864765 109923490 - transcript2978.chr10.nic@XPNPEP1 transcript2978.chr10.nic protein_coding 109923402,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109875528,109873367,109871792,109870731,109869953,109868614,109864765 109923490,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109875599,109873427,109871861,109870904,109870029,109868712,109865312 Gene ID= ENSG00000108039.17 TPM= 3.47 Transcript Type= NA chr10 109864766 109923553 109864766 109923553 - ENST00000322238.12@XPNPEP1 ENST00000322238.12 protein_coding 109923402,109915011,109907691,109893012,109891722,109888503,109888049,109886246,109884067,109882432,109880842,109880188,109878000,109877790,109873367,109871792,109870731,109869953,109868614,109864766 109923553,109915099,109907815,109893075,109891826,109888595,109888192,109886341,109884148,109882642,109880931,109880238,109878058,109877867,109873427,109871861,109870904,109870029,109868712,109865312 Gene ID= ENSG00000108039.17 TPM= 2.11 Transcript Type= protein_coding chr10 110008231 110135566 110008231 110135566 + transcript2984.chr10.nic@ADD3 transcript2984.chr10.nic protein_coding 110008231,110100625,110106000,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326 110008299,110100848,110106053,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110135566 Gene ID= ENSG00000148700.14 TPM= 3.17 Transcript Type= NA chr10 110007964 110135565 110007964 110135565 + ENST00000277900.12@ADD3 ENST00000277900.12 protein_coding 110007964,110100625,110112777,110116259,110117342,110118587,110119211,110119466,110122110,110124017,110125826,110126417,110130363,110133326 110008299,110100848,110112915,110116410,110117422,110118736,110119354,110119564,110122292,110124274,110125945,110126503,110130486,110135565 Gene ID= ENSG00000148700.14 TPM= 36.67 Transcript Type= protein_coding chr10 110207605 110287365 110207605 110287365 + ENST00000332674.9@MXI1 ENST00000332674.9 protein_coding 110207605,110228189,110244828,110279180,110279914,110284824 110208082,110228321,110244857,110279294,110280085,110287365 Gene ID= ENSG00000119950.20 TPM= 31.99 Transcript Type= protein_coding chr10 110225993 110286506 110225993 110286506 + ENST00000239007.11@MXI1 ENST00000239007.11 protein_coding 110225993,110228189,110244828,110279180,110279914,110284824 110226283,110228321,110244857,110279294,110280085,110286506 Gene ID= ENSG00000119950.20 TPM= 2.72 Transcript Type= protein_coding chr10 110497838 110511544 110497838 110511544 + ENST00000369583.3@DUSP5 ENST00000369583.3 protein_coding 110497838,110502721,110506935,110510020 110498500,110502869,110507154,110511544 Gene ID= ENSG00000138166.5 TPM= 41.66 Transcript Type= protein_coding chr10 110497907 110511545 110497907 110511545 + transcript3012.chr10.nnic@DUSP5 transcript3012.chr10.nnic protein_coding 110497907,110506935,110510020 110498500,110507154,110511545 Gene ID= ENSG00000138166.5 TPM= 3.62 Transcript Type= NA chr10 110567963 110604633 110567963 110604633 + transcript3015.chr10.nnic@SMC3 transcript3015.chr10.nnic protein_coding 110567963,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637,110601966,110602474,110602825,110603184,110604231 110568086,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601884,110602178,110602665,110603002,110603290,110604633 Gene ID= ENSG00000108055.9 TPM= 1.81 Transcript Type= NA chr10 110567691 110604636 110567691 110604636 + ENST00000361804.4@SMC3 ENST00000361804.4 protein_coding 110567691,110568938,110573707,110575336,110577421,110577835,110578628,110580904,110581923,110582562,110583384,110583841,110584183,110589605,110589892,110590412,110590991,110593073,110596398,110598139,110599654,110600439,110601022,110601637,110601966,110602474,110602825,110603184,110604231 110567831,110569013,110573745,110575403,110577492,110577914,110578706,110581021,110582098,110582642,110583548,110583962,110584396,110589708,110589991,110590572,110591132,110593223,110596550,110598290,110599812,110600546,110601130,110601884,110602178,110602665,110603002,110603290,110604636 Gene ID= ENSG00000108055.9 TPM= 67.01 Transcript Type= protein_coding chr10 110871795 110900005 110871795 110900005 + ENST00000393104.6@PDCD4 ENST00000393104.6 protein_coding 110871795,110875966,110876670,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028 110872018,110876070,110876753,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900005 Gene ID= ENSG00000150593.17 TPM= 4.23 Transcript Type= protein_coding chr10 110871807 110900006 110871807 110900006 + ENST00000280154.11@PDCD4 ENST00000280154.11 protein_coding 110871807,110875966,110881233,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028 110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900006 Gene ID= ENSG00000150593.17 TPM= 49.51 Transcript Type= protein_coding chr10 110871904 110900006 110871904 110900006 + transcript3020.chr10.nic@PDCD4 transcript3020.chr10.nic protein_coding 110871904,110875966,110881275,110883003,110885253,110887665,110889533,110890556,110894091,110894412,110895948,110898028 110872018,110876070,110881535,110883097,110885366,110887886,110889630,110890670,110894198,110894522,110896087,110900006 Gene ID= ENSG00000150593.17 TPM= 10.57 Transcript Type= NA chr10 110898730 110919274 110898730 110919274 - ENST00000448814.5@BBIP1 ENST00000448814.5 protein_coding 110919121,110918121,110901538,110898730 110919274,110918213,110901612,110900526 Gene ID= ENSG00000214413.7 TPM= 14.49 Transcript Type= protein_coding chr10 110919547 111013667 110919547 111013667 + ENST00000369452.8@SHOC2 ENST00000369452.8 protein_coding 110919547,110964125,110985628,111000415,111004606,111007531,111009248,111009713,111011610 110919657,110965061,110985765,111000545,111004794,111007653,111009385,111009830,111013667 Gene ID= ENSG00000108061.11 TPM= 40.3 Transcript Type= protein_coding chr10 110919596 111013666 110919596 111013666 + transcript3028.chr10.nnic@SHOC2 transcript3028.chr10.nnic protein_coding 110919596,110985628,111000415,111004606,111007531,111009248,111009713,111011610 110919657,110985765,111000545,111004794,111007653,111009385,111009830,111013666 Gene ID= ENSG00000108061.11 TPM= 4.98 Transcript Type= NA chr10 112149864 112183763 112149864 112183763 - ENST00000348367.8@GPAM ENST00000348367.8 protein_coding 112183693,112182794,112181683,112180473,112177984,112175600,112173699,112172970,112172182,112168853,112168312,112166402,112164525,112163701,112161667,112160604,112159911,112158316,112157249,112155864,112154629,112149864 112183763,112182891,112181813,112180595,112178057,112175713,112173845,112173066,112172318,112168952,112168524,112166515,112164610,112163816,112161737,112160868,112160053,112158393,112157389,112156053,112154687,112153666 Gene ID= ENSG00000119927.13 TPM= 7.24 Transcript Type= protein_coding chr10 112149866 112215396 112149866 112215396 - transcript3035.chr10.nic@GPAM transcript3035.chr10.nic protein_coding 112215168,112182794,112181683,112180473,112177984,112175600,112173699,112172970,112172182,112168853,112168312,112166402,112164525,112163701,112161667,112160604,112159911,112158316,112157249,112155864,112154629,112149866 112215396,112182891,112181813,112180595,112178057,112175713,112173845,112173066,112172318,112168952,112168524,112166515,112164610,112163816,112161737,112160868,112160053,112158393,112157389,112156053,112154687,112153666 Gene ID= ENSG00000119927.13 TPM= 10.87 Transcript Type= NA chr10 112430287 112446925 112430287 112446925 - transcript3048.chr10.nic@ZDHHC6 transcript3048.chr10.nic protein_coding 112446587,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430287 112446925,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907 Gene ID= ENSG00000023041.11 TPM= 7.24 Transcript Type= NA chr10 112430287 112446944 112430287 112446944 - transcript3050.chr10.nnic@ZDHHC6 transcript3050.chr10.nnic protein_coding 112446767,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430287 112446944,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907 Gene ID= ENSG00000023041.11 TPM= 2.72 Transcript Type= NA chr10 112430300 112446914 112430300 112446914 - ENST00000369405.7@ZDHHC6 ENST00000369405.7 protein_coding 112446705,112445170,112443515,112442192,112440534,112438336,112434297,112433240,112432376,112432240,112430300 112446914,112445650,112443606,112442351,112440695,112438389,112434464,112433281,112432521,112432286,112430907 Gene ID= ENSG00000023041.11 TPM= 47.99 Transcript Type= protein_coding chr10 112447234 112815439 112447234 112815439 + transcript3056.chr10.nnic@VTI1A transcript3056.chr10.nnic protein_coding 112447234,112460524,112464547,112527087,112538246,112668218,112668937,112815290 112447467,112460582,112464657,112527164,112538330,112668288,112669009,112815439 Gene ID= ENSG00000151532.13 TPM= 1.81 Transcript Type= NA chr10 112446998 112450726 112446998 112450726 + ENST00000483122.1@VTI1A ENST00000483122.1 protein_coding 112446998,112448382,112448882 112447467,112448489,112450726 Gene ID= ENSG00000151532.13 TPM= 1.81 Transcript Type= processed_transcript chr10 112447258 112818744 112447258 112818744 + ENST00000393077.2@VTI1A ENST00000393077.2 protein_coding 112447258,112460524,112464547,112527087,112538246,112668218,112668937,112815290 112447467,112460582,112464657,112527164,112538330,112668288,112668998,112818744 Gene ID= ENSG00000151532.13 TPM= 16.3 Transcript Type= protein_coding chr10 112950250 113167678 112950250 113167678 + ENST00000536810.5@TCF7L2 ENST00000536810.5 protein_coding 112950250,112951207,112951483,113040025,113141184,113143923,113146011,113150998,113151725,113152333,113158021,113159920,113165555 112950945,112951273,112951607,113040126,113141316,113144025,113146097,113151123,113151884,113152440,113158069,113159992,113167678 Gene ID= ENSG00000148737.16 TPM= 5.13 Transcript Type= protein_coding chr10 112950464 113167675 112950464 113167675 + transcript3072.chr10.nnic@TCF7L2 transcript3072.chr10.nnic protein_coding 112950464,112951207,112951483,113040025,113141182,113143923,113146011,113150998,113151725,113152333,113158021,113165555 112950945,112951273,112951607,113040126,113141316,113144025,113146097,113151123,113151884,113152440,113158069,113167675 Gene ID= ENSG00000148737.16 TPM= 8.76 Transcript Type= NA chr10 112950250 113167678 112950250 113167678 + ENST00000542695.5@TCF7L2 ENST00000542695.5 protein_coding 112950250,112951207,112951483,113040025,113089397,113141184,113143923,113146011,113150998,113151725,113152333,113158021,113158667,113160619,113165555 112950945,112951273,112951607,113040126,113089540,113141316,113144013,113146097,113151123,113151884,113152440,113158069,113158717,113160691,113167678 Gene ID= ENSG00000148737.16 TPM= 2.42 Transcript Type= protein_coding chr10 113679162 113730907 113679162 113730907 + ENST00000621345.4@CASP7 ENST00000621345.4 protein_coding 113679162,113697494,113721032,113721651,113725362,113726305,113729311 113679349,113697603,113721168,113721779,113725537,113726434,113730907 Gene ID= ENSG00000165806.19 TPM= 4.53 Transcript Type= protein_coding chr10 113679877 113730903 113679877 113730903 + ENST00000369318.7@CASP7 ENST00000369318.7 protein_coding 113679877,113697494,113721032,113721651,113725362,113726305,113729311 113679978,113697603,113721168,113721779,113725537,113726434,113730903 Gene ID= ENSG00000165806.19 TPM= 16.3 Transcript Type= protein_coding chr10 113834729 113854383 113834729 113854383 - ENST00000369305.1@DCLRE1A ENST00000369305.1 protein_coding 113854354,113852723,113848980,113847202,113845685,113844104,113842343,113841406,113837062,113834729 113854383,113853847,113850644,113847335,113845803,113844244,113842488,113841560,113837203,113835312 Gene ID= ENSG00000198924.7 TPM= 4.53 Transcript Type= protein_coding chr10 114120862 114174220 114120862 114174220 - ENST00000369287.7@CCDC186 ENST00000369287.7 protein_coding 114174015,114162637,114157554,114151092,114145549,114144497,114137186,114136148,114135891,114134913,114131929,114131147,114129891,114127461,114125886,114120862 114174220,114163329,114157680,114151220,114145761,114144616,114137290,114136246,114135977,114135055,114132184,114131336,114129971,114127671,114126105,114125226 Gene ID= ENSG00000165813.18 TPM= 1.81 Transcript Type= protein_coding chr10 114294826 114404510 114294826 114404510 - transcript3092.chr10.nic@AFAP1L2 transcript3092.chr10.nic protein_coding 114404440,114398851,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297220,114296978,114294826 114404510,114398904,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068 Gene ID= ENSG00000169129.14 TPM= 2.72 Transcript Type= NA chr10 114294824 114404756 114294824 114404756 - ENST00000369271.7@AFAP1L2 ENST00000369271.7 protein_coding 114404440,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297232,114296978,114294824 114404756,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068 Gene ID= ENSG00000169129.14 TPM= 4.53 Transcript Type= protein_coding chr10 114294824 114404485 114294824 114404485 - ENST00000304129.8@AFAP1L2 ENST00000304129.8 protein_coding 114404440,114340603,114333221,114331803,114323171,114315560,114313871,114310354,114308433,114307805,114304719,114302339,114301354,114300445,114300194,114299260,114297220,114296978,114294824 114404485,114340731,114333295,114331897,114323261,114315765,114314050,114310443,114308517,114307909,114304930,114302484,114301465,114300690,114300362,114299415,114297413,114297100,114296068 Gene ID= ENSG00000169129.14 TPM= 2.72 Transcript Type= protein_coding chr10 114431105 114632224 114431105 114632224 - transcript3099.chr10.nnic@ABLIM1 transcript3099.chr10.nnic protein_coding 114631902,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114453379,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431105 114632224,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114453483,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373 Gene ID= ENSG00000099204.18 TPM= 9.28 Transcript Type= NA chr10 114431105 114632237 114431105 114632237 - transcript3100.chr10.nnic@ABLIM1 transcript3100.chr10.nnic protein_coding 114631902,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431105 114632237,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373 Gene ID= ENSG00000099204.18 TPM= 11.09 Transcript Type= NA chr10 114431105 114632271 114431105 114632271 - transcript3103.chr10.nnic@ABLIM1 transcript3103.chr10.nnic protein_coding 114631902,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114447880,114445312,114444029,114441722,114441017,114439259,114439176,114437844,114431105 114632271,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114448020,114445403,114444134,114441786,114441077,114439263,114439253,114437924,114436373 Gene ID= ENSG00000099204.18 TPM= 9.28 Transcript Type= NA chr10 114431105 114575636 114431105 114575636 - transcript3105.chr10.nic@ABLIM1 transcript3105.chr10.nic protein_coding 114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114451624,114447880,114445312,114444029,114441722,114441017,114440082,114439176,114437844,114431105 114575636,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671,114448020,114445403,114444134,114441786,114441077,114440089,114439250,114437924,114436373 Gene ID= ENSG00000099204.18 TPM= 9.28 Transcript Type= NA chr10 114450339 114632303 114450339 114632303 - transcript3110.chr10.nnic@ABLIM1 transcript3110.chr10.nnic protein_coding 114631902,114601827,114575416,114571297,114547650,114545005,114491791,114487958,114473879,114472977,114468181,114465698,114450339 114632303,114601961,114575599,114571406,114547776,114545098,114491878,114488016,114473956,114473132,114468216,114465827,114451671 Gene ID= ENSG00000099204.18 TPM= 4.53 Transcript Type= NA chr10 114530507 114632875 114530507 114632875 - transcript3112.chr10.nnic@ABLIM1 transcript3112.chr10.nnic protein_coding 114631902,114601827,114575416,114571297,114547650,114545005,114530507 114632875,114601961,114575599,114571406,114547776,114545098,114532590 Gene ID= ENSG00000099204.18 TPM= 4.53 Transcript Type= NA chr10 114821744 114864717 114821744 114864717 + ENST00000369248.8@FAM160B1 ENST00000369248.8 protein_coding 114821744,114830852,114833233,114835537,114836124,114842933,114843741,114845367,114846013,114846175,114846559,114847090,114848647,114855197,114860749,114861231,114861435 114822123,114830930,114833402,114835641,114836246,114843226,114843937,114845481,114846089,114846367,114846728,114847233,114848737,114855340,114860889,114861334,114864717 Gene ID= ENSG00000151553.14 TPM= 34.41 Transcript Type= protein_coding chr10 114938193 114977676 114938193 114977676 + ENST00000298746.4@TRUB1 ENST00000298746.4 protein_coding 114938193,114942645,114951094,114959726,114970368,114972135,114974329,114975123 114938539,114942743,114951149,114959807,114970440,114972274,114974385,114977676 Gene ID= ENSG00000165832.5 TPM= 64.29 Transcript Type= protein_coding chr10 114938228 114977680 114938228 114977680 + transcript3129.chr10.nnic@TRUB1 transcript3129.chr10.nnic protein_coding 114938228,114951094,114959726,114970368,114972135,114974329,114975123 114938539,114951149,114959807,114970440,114972274,114974385,114977680 Gene ID= ENSG00000165832.5 TPM= 3.62 Transcript Type= NA chr10 115093314 115948990 115093314 115948990 + transcript3134.chr10.nic@ATRNL1 transcript3134.chr10.nic protein_coding 115093314,115120185,115121699,115127593,115129327,115160040,115165558,115171037,115215697,115241571,115265193,115266797,115268326,115281355,115286216,115300034,115301855,115315518,115334282,115394659,115426250,115461941,115467174,115469172,115519263,115549458,115727248,115847877,115944658 115093636,115120268,115121812,115127721,115129535,115160214,115165645,115171292,115215880,115241725,115265277,115267005,115268444,115281487,115286397,115300247,115302043,115315736,115334419,115394752,115426302,115462035,115467252,115469329,115519324,115549536,115727355,115847991,115948990 Gene ID= ENSG00000107518.16 TPM= 9.96 Transcript Type= NA chr10 115093153 115849225 115093153 115849225 + transcript3137.chr10.nic@ATRNL1 transcript3137.chr10.nic protein_coding 115093153,115120185,115121699,115127593,115129327,115160040,115165558,115171037,115215697,115241571,115265193,115266797,115268326,115281355,115286216,115300034,115301855,115315518,115334282,115394659,115426250,115461941,115467174,115469172,115519263,115549458,115727248,115847877 115094043,115120268,115121812,115127721,115129535,115160214,115165645,115171292,115215880,115241725,115265277,115267005,115268444,115281487,115286397,115300247,115302043,115315736,115334419,115394752,115426302,115462035,115467252,115469329,115519324,115549536,115727355,115849225 Gene ID= ENSG00000107518.16 TPM= 2.72 Transcript Type= NA chr10 115093365 115171376 115093365 115171376 + ENST00000609571.5@ATRNL1 ENST00000609571.5 protein_coding 115093365,115120185,115121699,115127593,115129327,115160040,115165558,115171037 115094043,115120268,115121812,115127721,115129535,115160214,115165645,115171376 Gene ID= ENSG00000107518.16 TPM= 16.3 Transcript Type= protein_coding chr10 116662214 116670311 116662214 116670311 - transcript3157.chr10.nic@C10orf82 transcript3157.chr10.nic protein_coding 116670081,116668258,116665608,116664761,116664174,116662214 116670311,116668323,116665826,116664947,116664271,116664051 Gene ID= ENSG00000165863.16 TPM= 7.24 Transcript Type= NA chr10 116662214 116670311 116662214 116670311 - transcript3160.chr10.nic@C10orf82 transcript3160.chr10.nic protein_coding 116670081,116668258,116664761,116664174,116662214 116670311,116668323,116665826,116664271,116664051 Gene ID= ENSG00000165863.16 TPM= 2.72 Transcript Type= NA chr10 116664286 116670264 116664286 116670264 - ENST00000588224.1@C10orf82 ENST00000588224.1 protein_coding 116670081,116668258,116664286 116670264,116668323,116665826 Gene ID= ENSG00000165863.16 TPM= 11.77 Transcript Type= retained_intron chr10 116671193 116743152 116671193 116743152 - transcript3162.chr10.nnic@HSPA12A transcript3162.chr10.nnic protein_coding 116742430,116727227,116707200,116705151,116700943,116698635,116692351,116683791,116681791,116681152,116679503,116676399,116671193 116743152,116727380,116707285,116705278,116701129,116698739,116692467,116683962,116681877,116681256,116679761,116676502,116675418 Gene ID= ENSG00000165868.13 TPM= 3.62 Transcript Type= NA chr10 116703314 116742593 116703314 116742593 - transcript3165.chr10.nnic@HSPA12A transcript3165.chr10.nnic protein_coding 116742430,116707200,116705151,116703314 116742593,116707285,116705278,116703506 Gene ID= ENSG00000165868.13 TPM= 2.72 Transcript Type= NA chr10 116703314 116742564 116703314 116742564 - transcript3166.chr10.nnic@HSPA12A transcript3166.chr10.nnic protein_coding 116742430,116707200,116705151,116703314 116742564,116707285,116705278,116703968 Gene ID= ENSG00000165868.13 TPM= 1.81 Transcript Type= NA chr10 116671192 116742574 116671192 116742574 - ENST00000369209.7@HSPA12A ENST00000369209.7 protein_coding 116742430,116707200,116705151,116700943,116698635,116692351,116683791,116681791,116681152,116679503,116676399,116671192 116742574,116707285,116705278,116701129,116698739,116692467,116683962,116681877,116681256,116679761,116676502,116675418 Gene ID= ENSG00000165868.13 TPM= 16.3 Transcript Type= protein_coding chr10 116828761 116849701 116828761 116849701 - ENST00000453491.2@AC023283.1 ENST00000453491.2 processed_transcript 116849566,116835198,116834935,116828761 116849701,116835257,116835022,116833373 Gene ID= ENSG00000225302.2 TPM= 1.81 Transcript Type= processed_transcript chr10 116924776 117005614 116924776 117005614 - transcript3171.chr10.nic@SHTN1 transcript3171.chr10.nic protein_coding 117005022,116979256,116968652,116960136,116954042,116951909,116948916,116944924,116940466,116929849,116924776 117005614,116979308,116968712,116960230,116954210,116952006,116948997,116945018,116940612,116930002,116927891 Gene ID= ENSG00000187164.19 TPM= 3.62 Transcript Type= NA chr10 117277274 117375467 117277274 117375467 - ENST00000334464.6@PDZD8 ENST00000334464.6 protein_coding 117374356,117340980,117318872,117290186,117277274 117375467,117341102,117318974,117290348,117285471 Gene ID= ENSG00000165650.11 TPM= 23.54 Transcript Type= protein_coding chr10 118047004 118100139 118047004 118100139 + ENST00000454781.5@CASC2 ENST00000454781.5 antisense_RNA 118047004,118049512,118052131,118098196 118047103,118049617,118052196,118100139 Gene ID= ENSG00000177640.15 TPM= 2.72 Transcript Type= antisense_RNA chr10 118309752 118342328 118309752 118342328 - transcript3178.chr10.nnic@FAM204A transcript3178.chr10.nnic protein_coding 118342270,118341727,118337230,118336182,118335554,118335396,118335114,118326154,118311207,118309752 118342328,118341927,118337408,118336423,118335641,118335426,118335213,118326243,118311313,118310908 Gene ID= ENSG00000165669.13 TPM= 3.17 Transcript Type= NA chr10 118297930 118342320 118297930 118342320 - ENST00000369183.8@FAM204A ENST00000369183.8 protein_coding 118342270,118341727,118336182,118335554,118335396,118335114,118326154,118311207,118297930 118342320,118341927,118336423,118335641,118335426,118335213,118326243,118311313,118310908 Gene ID= ENSG00000165669.13 TPM= 14.94 Transcript Type= protein_coding chr10 118310746 118342320 118310746 118342320 - ENST00000369172.8@FAM204A ENST00000369172.8 protein_coding 118342270,118336182,118335554,118335396,118335114,118326154,118311207,118310746 118342320,118336423,118335641,118335426,118335213,118326243,118311313,118310908 Gene ID= ENSG00000165669.13 TPM= 4.53 Transcript Type= protein_coding chr10 118310720 118342315 118310720 118342315 - ENST00000470476.5@FAM204A ENST00000470476.5 protein_coding 118342270,118336182,118335554,118335396,118335114,118326154,118322305,118311207,118310720 118342315,118336423,118335641,118335426,118335213,118326243,118322411,118311313,118310908 Gene ID= ENSG00000165669.13 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr10 118676411 118755246 118676411 118755246 - ENST00000369151.7@CACUL1 ENST00000369151.7 protein_coding 118754396,118730284,118729295,118707492,118701306,118695141,118691265,118686598,118676411 118755246,118730410,118729397,118707587,118701408,118695230,118691403,118686641,118686168 Gene ID= ENSG00000151893.14 TPM= 34.41 Transcript Type= protein_coding chr10 119033670 119080804 119033670 119080804 - ENST00000369144.7@EIF3A ENST00000369144.7 protein_coding 119080628,119073747,119073441,119072890,119070886,119069446,119065399,119061224,119060746,119059602,119059212,119057956,119056936,119056740,119051199,119050521,119049801,119044054,119041994,119038238,119037119,119033670 119080804,119073937,119073577,119073053,119071085,119069654,119065570,119061328,119060844,119059718,119059397,119058303,119057040,119056853,119051321,119050674,119049985,119044142,119042772,119038439,119037309,119036268 Gene ID= ENSG00000107581.12 TPM= 104.14 Transcript Type= protein_coding chr10 119104052 119137985 119104052 119137985 + transcript3201.chr10.nnic@FAM45A transcript3201.chr10.nnic protein_coding 119104052,119105311,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119136471 119104197,119105495,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137985 Gene ID= ENSG00000119979.16 TPM= 3.92 Transcript Type= NA chr10 119104066 119137985 119104066 119137985 + transcript3203.chr10.nnic@FAM45A transcript3203.chr10.nnic protein_coding 119104066,119104764,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119136471 119104197,119105006,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137985 Gene ID= ENSG00000119979.16 TPM= 8.45 Transcript Type= NA chr10 119104070 119137985 119104070 119137985 + transcript3209.chr10.nic@FAM45A transcript3209.chr10.nic protein_coding 119104070,119107948,119111849,119117519,119120341,119123469,119129515,119132515,119136471 119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137985 Gene ID= ENSG00000119979.16 TPM= 20.22 Transcript Type= NA chr10 119104117 119137195 119104117 119137195 + ENST00000361432.2@FAM45A ENST00000361432.2 protein_coding 119104117,119107968,119111849,119117519,119120341,119123469,119129515,119132515,119136471 119104197,119108164,119111928,119117667,119120452,119123569,119129622,119132609,119137195 Gene ID= ENSG00000119979.16 TPM= 11.77 Transcript Type= protein_coding chr10 119140915 119165559 119140915 119165559 - transcript3219.chr10.nic@SFXN4 transcript3219.chr10.nic protein_coding 119165202,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140915 119165559,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319 Gene ID= ENSG00000183605.16 TPM= 10.41 Transcript Type= NA chr10 119140915 119165724 119140915 119165724 - transcript3224.chr10.nic@SFXN4 transcript3224.chr10.nic protein_coding 119165537,119164131,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140915 119165724,119164196,119162414,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319 Gene ID= ENSG00000183605.16 TPM= 2.72 Transcript Type= NA chr10 119140913 119165667 119140913 119165667 - ENST00000355697.6@SFXN4 ENST00000355697.6 protein_coding 119165537,119164131,119162340,119161055,119160915,119159728,119158009,119157871,119157668,119156678,119155062,119147775,119146236,119140913 119165667,119164196,119162414,119161081,119160969,119159753,119158062,119157927,119157733,119156756,119155177,119147860,119146353,119141319 Gene ID= ENSG00000183605.16 TPM= 37.58 Transcript Type= protein_coding chr10 119167703 119178833 119167703 119178833 - ENST00000298510.3@PRDX3 ENST00000298510.3 protein_coding 119178755,119177021,119174451,119173737,119172382,119169177,119167703 119178833,119177153,119174592,119173872,119172485,119169342,119168533 Gene ID= ENSG00000165672.6 TPM= 955.96 Transcript Type= protein_coding chr10 119207589 119455619 119207589 119455619 + ENST00000392870.2@GRK5 ENST00000392870.2 protein_coding 119207589,119326516,119380815,119396695,119423166,119424993,119430375,119431387,119436651,119439731,119441999,119443544,119448123,119452671,119453145,119454969 119207969,119326611,119380927,119396772,119423266,119425085,119430438,119431527,119436841,119439768,119442088,119443752,119448260,119452808,119453276,119455619 Gene ID= ENSG00000198873.11 TPM= 17.21 Transcript Type= protein_coding chr10 119499925 119542708 119499925 119542708 - ENST00000369103.2@RGS10 ENST00000369103.2 protein_coding 119542590,119527306,119526032,119515509,119499925 119542708,119527424,119526118,119515652,119500259 Gene ID= ENSG00000148908.14 TPM= 8.15 Transcript Type= protein_coding chr10 119575399 119596964 119575399 119596964 - ENST00000489822.5@TIAL1 ENST00000489822.5 protein_coding 119596434,119588152,119582459,119582169,119581922,119579935,119578726,119577641,119577451,119576611,119575399 119596964,119588248,119582557,119582223,119582009,119580010,119578834,119577736,119577535,119577203,119575791 Gene ID= ENSG00000151923.17 TPM= 3.62 Transcript Type= retained_intron chr10 119651370 119677819 119651370 119677819 + ENST00000369085.7@BAG3 ENST00000369085.7 protein_coding 119651370,119669851,119672255,119676464 119651855,119670177,119672656,119677819 Gene ID= ENSG00000151929.9 TPM= 99.61 Transcript Type= protein_coding chr10 119726097 119829278 119726097 119829278 + ENST00000361976.6@INPP5F ENST00000361976.6 protein_coding 119726097,119751076,119781635,119791517,119791869,119792157,119796715,119797461,119798543,119804173,119805384,119806360,119807932,119810100,119811757,119820846,119822431,119823071,119823815,119826631 119726359,119751156,119781771,119791645,119792036,119792213,119796913,119797640,119798610,119804297,119805461,119806480,119808060,119810217,119811955,119820917,119822504,119823199,119823902,119829278 Gene ID= ENSG00000198825.12 TPM= 3.62 Transcript Type= protein_coding chr10 119831197 119872849 119831197 119872849 - ENST00000369077.3@MCMBP ENST00000369077.3 protein_coding 119872527,119859799,119859041,119858884,119857338,119853050,119849425,119847613,119843254,119842472,119840843,119838535,119836896,119835540,119832012,119831197 119872849,119859884,119859181,119858925,119857439,119853194,119849576,119847713,119843426,119842595,119840960,119838700,119837029,119835704,119832100,119831600 Gene ID= ENSG00000197771.12 TPM= 38.03 Transcript Type= protein_coding chr10 119892703 119941733 119892703 119941733 + transcript3257.chr10.nic@SEC23IP transcript3257.chr10.nic protein_coding 119892703,119898244,119902799,119904084,119909041,119912044,119914730,119915748,119917836,119918393,119919444,119920889,119926036,119929607,119930329,119932133,119933005,119933686,119940586 119892945,119898959,119903009,119904277,119909130,119912164,119914819,119915889,119918044,119918511,119919596,119920984,119926227,119929762,119930431,119932318,119933167,119933787,119941733 Gene ID= ENSG00000107651.12 TPM= 8.15 Transcript Type= NA chr10 120354701 120355183 120354701 120355183 - ENST00000495531.1@RPL21P16 ENST00000495531.1 processed_pseudogene 120354701 120355183 Gene ID= ENSG00000220842.6 TPM= 545.14 Transcript Type= processed_pseudogene chr10 120851175 120909524 120851175 120909524 + ENST00000263461.10@WDR11 ENST00000263461.10 protein_coding 120851175,120852524,120858643,120860109,120862735,120865047,120865630,120866569,120867066,120871170,120873839,120878353,120880826,120883780,120885814,120886689,120889078,120889895,120890716,120900029,120901036,120902257,120903055,120904047,120904646,120905319,120905876,120906776,120908556 120851506,120852635,120858796,120860282,120862921,120865212,120865744,120866764,120867169,120871346,120873923,120878459,120880901,120883888,120885938,120886836,120889184,120890009,120890887,120900137,120901098,120902322,120903232,120904142,120904811,120905416,120906021,120906855,120909524 Gene ID= ENSG00000120008.15 TPM= 37.13 Transcript Type= protein_coding chr10 120851347 120879259 120851347 120879259 + transcript3271.chr10.nic@WDR11 transcript3271.chr10.nic protein_coding 120851347,120852524,120858643,120860109,120862735,120865047,120865630,120866569,120867066,120871170,120873839,120878353 120851506,120852635,120858796,120860282,120862921,120865212,120865744,120866764,120867169,120871346,120873923,120879259 Gene ID= ENSG00000120008.15 TPM= 5.43 Transcript Type= NA chr10 121478334 121598479 121478334 121598479 - transcript3274.chr10.nnic@FGFR2 transcript3274.chr10.nnic protein_coding 121597962,121593709,121565438,121564502,121551290,121538592,121519979,121517319,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478334 121598479,121593967,121565704,121564579,121551459,121538715,121520169,121517463,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480021 Gene ID= ENSG00000066468.22 TPM= 19.5 Transcript Type= NA chr10 121478382 121598479 121478382 121598479 - transcript3276.chr10.nnic@FGFR2 transcript3276.chr10.nnic protein_coding 121597962,121593709,121565438,121564502,121551290,121538592,121519979,121517319,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478382 121598479,121593967,121565704,121564579,121551459,121538715,121520169,121517463,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480113 Gene ID= ENSG00000066468.22 TPM= 2.11 Transcript Type= NA chr10 121481860 121598479 121481860 121598479 - transcript3278.chr10.nnic@FGFR2 transcript3278.chr10.nnic protein_coding 121597962,121593709,121565438,121564502,121551290,121538592,121519979,121517319,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121481860 121598479,121593967,121565704,121564579,121551459,121538715,121520169,121517463,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121482177 Gene ID= ENSG00000066468.22 TPM= 1.81 Transcript Type= NA chr10 121478334 121598479 121478334 121598479 - transcript3280.chr10.nnic@FGFR2 transcript3280.chr10.nnic protein_coding 121597962,121593709,121564502,121551290,121538592,121519979,121517319,121515113,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478334 121598479,121593967,121564579,121551459,121538715,121520169,121517463,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480021 Gene ID= ENSG00000066468.22 TPM= 4.1 Transcript Type= NA chr10 121478334 121598458 121478334 121598458 - ENST00000613048.4@FGFR2 ENST00000613048.4 protein_coding 121597962,121593709,121564502,121551290,121538592,121519979,121517319,121515117,121503790,121500826,121498495,121496532,121487991,121487354,121485395,121483698,121478334 121598458,121593967,121564579,121551459,121538715,121520169,121517463,121515319,121503941,121500947,121498605,121496722,121488113,121487424,121485532,121483803,121480021 Gene ID= ENSG00000066468.22 TPM= 5.91 Transcript Type= protein_coding chr10 121740421 121928801 121740421 121928801 - ENST00000540606.5@ATE1 ENST00000540606.5 protein_coding 121928347,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740421 121928801,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858 Gene ID= ENSG00000107669.17 TPM= 3.17 Transcript Type= protein_coding chr10 121740421 121928063 121740421 121928063 - ENST00000224652.10@ATE1 ENST00000224652.10 protein_coding 121927844,121924266,121922349,121913790,121910906,121902391,121899866,121870006,121841082,121836718,121790169,121740421 121928063,121924329,121922411,121913893,121911151,121902620,121899994,121870038,121841263,121836817,121790289,121743858 Gene ID= ENSG00000107669.17 TPM= 10.41 Transcript Type= protein_coding chr10 121740420 121928057 121740420 121928057 - transcript3290.chr10.nic@ATE1 transcript3290.chr10.nic protein_coding 121927844,121924266,121922349,121913790,121910906,121902391,121870006,121841082,121836718,121790169,121740420 121928057,121924329,121922411,121913893,121911151,121902620,121870038,121841263,121836817,121790289,121743858 Gene ID= ENSG00000107669.17 TPM= 3.17 Transcript Type= NA chr10 121740424 121928036 121740424 121928036 - ENST00000369043.7@ATE1 ENST00000369043.7 protein_coding 121927844,121924266,121922349,121913790,121910906,121902391,121898841,121870006,121841082,121836718,121790169,121740424 121928036,121924329,121922411,121913893,121911151,121902620,121898969,121870038,121841263,121836817,121790289,121743858 Gene ID= ENSG00000107669.17 TPM= 9.51 Transcript Type= protein_coding chr10 121957090 121975266 121957090 121975266 - transcript3295.chr10.nic@NSMCE4A transcript3295.chr10.nic protein_coding 121974306,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957090 121975266,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259 Gene ID= ENSG00000107672.14 TPM= 2.72 Transcript Type= NA chr10 121957090 121974833 121957090 121974833 - transcript3296.chr10.nic@NSMCE4A transcript3296.chr10.nic protein_coding 121974390,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957090 121974833,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259 Gene ID= ENSG00000107672.14 TPM= 1.81 Transcript Type= NA chr10 121957090 121975248 121957090 121975248 - transcript3299.chr10.nic@NSMCE4A transcript3299.chr10.nic protein_coding 121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957090 121975248,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259 Gene ID= ENSG00000107672.14 TPM= 1.81 Transcript Type= NA chr10 121957090 121975248 121957090 121975248 - transcript3302.chr10.nic@NSMCE4A transcript3302.chr10.nic protein_coding 121974004,121970939,121967655,121965286,121963238,121961423,121959501,121959324,121957090 121975248,121971069,121967806,121965385,121963328,121961517,121960406,121959410,121957259 Gene ID= ENSG00000107672.14 TPM= 1.81 Transcript Type= NA chr10 121957090 121975248 121957090 121975248 - transcript3304.chr10.nic@NSMCE4A transcript3304.chr10.nic protein_coding 121974004,121970939,121967655,121965286,121963238,121961423,121959324,121957090 121975248,121971069,121967806,121965385,121963328,121961517,121960406,121957259 Gene ID= ENSG00000107672.14 TPM= 4.53 Transcript Type= NA chr10 121957088 121975217 121957088 121975217 - ENST00000369023.7@NSMCE4A ENST00000369023.7 protein_coding 121974874,121974004,121970939,121967655,121965286,121963238,121961423,121960358,121959501,121959324,121957088 121975217,121974081,121971069,121967806,121965385,121963328,121961517,121960406,121959595,121959410,121957259 Gene ID= ENSG00000107672.14 TPM= 35.32 Transcript Type= protein_coding chr10 122112821 122254541 122112821 122254541 + transcript3307.chr10.nic@TACC2 transcript3307.chr10.nic protein_coding 122112821,122132609,122143572,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991 122113233,122132734,122143706,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254541 Gene ID= ENSG00000138162.18 TPM= 4.53 Transcript Type= NA chr10 122112734 122254541 122112734 122254541 + transcript3309.chr10.nic@TACC2 transcript3309.chr10.nic protein_coding 122112734,122132609,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991 122113233,122132734,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254541 Gene ID= ENSG00000138162.18 TPM= 9.96 Transcript Type= NA chr10 122112796 122254541 122112796 122254541 + transcript3312.chr10.nnic@TACC2 transcript3312.chr10.nnic protein_coding 122112796,122195040,122210397,122215391,122216627,122224726,122226366,122227837,122237395,122237961,122241958,122248643,122249050,122249544,122253991 122113233,122195176,122211708,122215451,122216828,122224787,122226481,122228008,122237538,122238037,122242001,122248803,122249156,122249664,122254541 Gene ID= ENSG00000138162.18 TPM= 6.34 Transcript Type= NA chr10 122374694 122432350 122374694 122432350 + transcript3316.chr10.nnic@PLEKHA1 transcript3316.chr10.nnic protein_coding 122374694,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624 122374806,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432350 Gene ID= ENSG00000107679.14 TPM= 5.61 Transcript Type= NA chr10 122374698 122432348 122374698 122432348 + transcript3318.chr10.nnic@PLEKHA1 transcript3318.chr10.nnic protein_coding 122374698,122392303,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122429624 122374806,122392372,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122432348 Gene ID= ENSG00000107679.14 TPM= 2.9 Transcript Type= NA chr10 122374632 122432350 122374632 122432350 + transcript3319.chr10.nic@PLEKHA1 transcript3319.chr10.nic protein_coding 122374632,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624 122374806,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428316,122432350 Gene ID= ENSG00000107679.14 TPM= 9.24 Transcript Type= NA chr10 122374711 122432350 122374711 122432350 + transcript3321.chr10.nic@PLEKHA1 transcript3321.chr10.nic protein_coding 122374711,122393181,122397918,122400343,122406576,122412920,122415859,122417900,122424199,122424896,122426942,122428276,122429624 122374806,122393341,122397974,122400388,122406673,122413045,122416002,122417968,122424263,122424959,122427031,122428420,122432350 Gene ID= ENSG00000107679.14 TPM= 2.9 Transcript Type= NA chr10 122461525 122514908 122461525 122514908 + ENST00000368984.7@HTRA1 ENST00000368984.7 protein_coding 122461525,122488902,122489422,122506691,122507370,122508656,122510096,122511970,122514191 122462124,122489001,122489626,122506885,122507402,122508770,122510153,122512065,122514908 Gene ID= ENSG00000166033.11 TPM= 182.92 Transcript Type= protein_coding chr10 122930903 122954311 122930903 122954311 - ENST00000368891.9@C10orf88 ENST00000368891.9 protein_coding 122954015,122952829,122951954,122948649,122937705,122930903 122954311,122953028,122952026,122948855,122938159,122932661 Gene ID= ENSG00000119965.12 TPM= 5.43 Transcript Type= processed_transcript chr10 122934063 122954216 122934063 122954216 - transcript3339.chr10.nic@C10orf88 transcript3339.chr10.nic protein_coding 122954015,122952829,122951954,122948649,122934063 122954216,122953032,122952026,122948855,122938159 Gene ID= ENSG00000119965.12 TPM= 2.72 Transcript Type= NA chr10 122954438 122990388 122954438 122990388 + transcript3348.chr10.nic@PSTK transcript3348.chr10.nic protein_coding 122954438,122983272,122986300,122986869,122990174 122954568,122983470,122986375,122986962,122990388 Gene ID= ENSG00000179988.13 TPM= 2.72 Transcript Type= NA chr10 122980478 122990392 122980478 122990392 + ENST00000406217.6@PSTK ENST00000406217.6 protein_coding 122980478,122982733,122983272,122986300,122986869,122990174 122980695,122983024,122983470,122986375,122986962,122990392 Gene ID= ENSG00000179988.13 TPM= 1.81 Transcript Type= protein_coding chr10 122990806 123008817 122990806 123008817 - ENST00000368886.9@IKZF5 ENST00000368886.9 protein_coding 123008694,123007026,122998493,122995994,122990806 123008817,123007176,122998671,122996176,122994723 Gene ID= ENSG00000095574.11 TPM= 6.34 Transcript Type= protein_coding chr10 122990806 123008819 122990806 123008819 - transcript3352.chr10.nic@IKZF5 transcript3352.chr10.nic protein_coding 123008694,122998493,122995994,122990806 123008819,122998671,122996176,122994723 Gene ID= ENSG00000095574.11 TPM= 4.53 Transcript Type= NA chr10 123009006 123055133 123009006 123055133 + transcript3343.chr10.nic@ACADSB transcript3343.chr10.nic protein_coding 123009006,123034356,123037747,123040466,123041209,123043046,123047209,123051049,123053061,123053695 123009071,123034515,123037847,123040672,123041379,123044485,123047298,123051186,123053160,123055133 Gene ID= ENSG00000196177.12 TPM= 1.81 Transcript Type= NA chr10 123009016 123058311 123009016 123058311 + ENST00000358776.6@ACADSB ENST00000358776.6 protein_coding 123009016,123034356,123037747,123040466,123041209,123043046,123044393,123047209,123051049,123053061,123053695 123009071,123034515,123037847,123040672,123041379,123043171,123044485,123047298,123051186,123053160,123058311 Gene ID= ENSG00000196177.12 TPM= 72.44 Transcript Type= protein_coding chr10 123154382 123165363 123154382 123165363 + transcript3355.chr10.nic@BUB3 transcript3355.chr10.nic protein_coding 123154382,123154918,123155658,123157729,123160407,123162236,123162612 123154485,123155112,123155727,123157880,123160565,123162413,123165363 Gene ID= ENSG00000154473.17 TPM= 18.11 Transcript Type= NA chr10 123154415 123165365 123154415 123165365 + ENST00000368858.9@BUB3 ENST00000368858.9 protein_coding 123154415,123154918,123155658,123157729,123160407,123162236,123162612,123165047 123154485,123155112,123155727,123157880,123160565,123162413,123162828,123165365 Gene ID= ENSG00000154473.17 TPM= 27.17 Transcript Type= protein_coding chr10 123745636 123891814 123745636 123891814 - ENST00000241305.3@CPXM2 ENST00000241305.3 protein_coding 123891356,123880211,123862614,123842349,123799115,123797976,123780167,123770916,123768526,123766973,123761872,123757213,123754663,123745636 123891814,123880309,123862723,123842488,123799199,123798126,123780255,123771039,123768722,123767152,123762169,123757352,123754762,123747017 Gene ID= ENSG00000121898.12 TPM= 14.49 Transcript Type= protein_coding chr10 124007668 124092454 124007668 124092454 - ENST00000346248.7@CHST15 ENST00000346248.7 protein_coding 124092324,124045667,124044580,124042301,124038515,124021256,124012333,124007668 124092454,124046724,124044919,124042447,124038671,124021412,124012480,124010339 Gene ID= ENSG00000182022.17 TPM= 12.22 Transcript Type= protein_coding chr10 124007666 124093607 124007666 124093607 - ENST00000435907.5@CHST15 ENST00000435907.5 protein_coding 124093469,124045667,124044580,124042301,124038515,124021256,124012333,124007666 124093607,124046724,124044919,124042447,124038671,124021412,124012480,124010339 Gene ID= ENSG00000182022.17 TPM= 14.04 Transcript Type= protein_coding chr10 124397303 124418976 124397303 124418976 - ENST00000539214.5@OAT ENST00000539214.5 protein_coding 124418873,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397303 124418976,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102 Gene ID= ENSG00000065154.11 TPM= 2.58 Transcript Type= protein_coding chr10 124397307 124418936 124397307 124418936 - ENST00000368845.5@OAT ENST00000368845.5 protein_coding 124418873,124411973,124408741,124408542,124405436,124403798,124402927,124401726,124400840,124397307 124418936,124412200,124408965,124408637,124405563,124403920,124403055,124401839,124400984,124398102 Gene ID= ENSG00000065154.11 TPM= 486.82 Transcript Type= protein_coding chr10 124461792 124614140 124461792 124614140 + transcript3378.chr10.nnic@LHPP transcript3378.chr10.nnic protein_coding 124461792,124484139,124488422,124496961,124498036,124517180,124526150,124613264 124461987,124484326,124488575,124497024,124498128,124517271,124526264,124614140 Gene ID= ENSG00000107902.13 TPM= 5.13 Transcript Type= NA chr10 124461792 124511322 124461792 124511322 + transcript3384.chr10.nnic@LHPP transcript3384.chr10.nnic protein_coding 124461792,124484139,124488422,124496961,124498036,124509218 124461987,124484326,124488575,124497024,124498128,124511322 Gene ID= ENSG00000107902.13 TPM= 1.81 Transcript Type= NA chr10 124461792 124519365 124461792 124519365 + transcript3386.chr10.nic@LHPP transcript3386.chr10.nic protein_coding 124461792,124484139,124488422,124496961,124498036,124517180 124461987,124484326,124488575,124497024,124498128,124519365 Gene ID= ENSG00000107902.13 TPM= 4.53 Transcript Type= NA chr10 124461835 124614141 124461835 124614141 + ENST00000368842.9@LHPP ENST00000368842.9 protein_coding 124461835,124484139,124488422,124496961,124498036,124517180,124613264 124461987,124484326,124488575,124497024,124498128,124517271,124614141 Gene ID= ENSG00000107902.13 TPM= 47.7 Transcript Type= protein_coding chr10 124461834 124498514 124461834 124498514 + ENST00000392757.8@LHPP ENST00000392757.8 protein_coding 124461834,124484139,124488422,124496961,124498036,124498328 124461987,124484326,124488575,124497024,124498128,124498514 Gene ID= ENSG00000107902.13 TPM= 7.24 Transcript Type= protein_coding chr10 124461843 124614141 124461843 124614141 + ENST00000368839.1@LHPP ENST00000368839.1 protein_coding 124461843,124484139,124488422,124496961,124498036,124613264 124461987,124484326,124488575,124497024,124498128,124614141 Gene ID= ENSG00000107902.13 TPM= 3.32 Transcript Type= protein_coding chr10 124619290 124791851 124619290 124791851 - transcript3391.chr10.nic@AC068896.1 transcript3391.chr10.nic protein_coding 124791724,124790273,124789043,124774675,124765392,124760386,124706636,124696158,124681607,124619290 124791851,124790338,124789157,124774782,124765608,124760503,124706887,124696212,124682379,124623604 Gene ID= ENSG00000258539.1 TPM= 1.81 Transcript Type= NA chr10 124619290 124736545 124619290 124736545 - transcript3400.chr10.nnic@FAM53B transcript3400.chr10.nnic protein_coding 124736454,124706636,124696158,124681607,124619290 124736545,124706887,124696212,124682379,124623604 Gene ID= ENSG00000189319.13 TPM= 1.81 Transcript Type= NA chr10 124619290 124744014 124619290 124744014 - transcript3402.chr10.nnic@FAM53B transcript3402.chr10.nnic protein_coding 124743452,124706636,124696158,124681607,124619290 124744014,124706887,124696212,124682379,124623604 Gene ID= ENSG00000189319.13 TPM= 2.72 Transcript Type= NA chr10 124619292 124744050 124619292 124744050 - ENST00000337318.7@FAM53B ENST00000337318.7 protein_coding 124744013,124706636,124696158,124681607,124619292 124744050,124706887,124696212,124682379,124623604 Gene ID= ENSG00000189319.13 TPM= 22.64 Transcript Type= protein_coding chr10 124759955 124792174 124759955 124792174 - transcript3393.chr10.nnic@EEF1AKMT2 transcript3393.chr10.nnic protein_coding 124791724,124790273,124789043,124774675,124767224,124765392,124762300,124759955 124792174,124790338,124789157,124774782,124767347,124765608,124762558,124760503 Gene ID= ENSG00000203791.14 TPM= 3.62 Transcript Type= NA chr10 124759858 124791864 124759858 124791864 - transcript3399.chr10.nnic@EEF1AKMT2 transcript3399.chr10.nnic protein_coding 124791724,124790273,124789043,124765392,124762300,124759858 124791864,124790338,124789157,124765608,124762558,124760503 Gene ID= ENSG00000203791.14 TPM= 1.81 Transcript Type= NA chr10 124759954 124791870 124759954 124791870 - ENST00000368836.6@EEF1AKMT2 ENST00000368836.6 protein_coding 124791724,124790273,124789043,124774675,124765392,124762300,124759954 124791870,124790338,124789157,124774782,124765608,124762558,124760503 Gene ID= ENSG00000203791.14 TPM= 3.62 Transcript Type= protein_coding chr10 124801785 124836670 124801785 124836670 + ENST00000298492.5@ABRAXAS2 ENST00000298492.5 protein_coding 124801785,124806831,124816576,124819384,124826595,124828756,124829393,124831349,124834502 124801901,124806921,124816612,124819450,124826785,124828875,124829477,124831463,124836670 Gene ID= ENSG00000165660.7 TPM= 24.45 Transcript Type= protein_coding chr10 124916857 124987432 124916857 124987432 + transcript3417.chr10.nnic@ZRANB1 transcript3417.chr10.nnic protein_coding 124916857,124926978,124940374,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774 124917272,124927269,124940547,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124987432 Gene ID= ENSG00000019995.6 TPM= 5.04 Transcript Type= NA chr10 124916857 124986461 124916857 124986461 + transcript3424.chr10.nnic@ZRANB1 transcript3424.chr10.nnic protein_coding 124916857,124926978,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774 124917272,124927269,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986461 Gene ID= ENSG00000019995.6 TPM= 5.95 Transcript Type= NA chr10 124916863 124986460 124916863 124986460 + transcript3425.chr10.nnic@ZRANB1 transcript3425.chr10.nnic protein_coding 124916863,124940374,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774 124917272,124940547,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986460 Gene ID= ENSG00000019995.6 TPM= 15.91 Transcript Type= NA chr10 124916851 124988187 124916851 124988187 + transcript3441.chr10.nic@ZRANB1 transcript3441.chr10.nic protein_coding 124916851,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774 124917272,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124988187 Gene ID= ENSG00000019995.6 TPM= 63.9 Transcript Type= NA chr10 124916920 124986458 124916920 124986458 + transcript3442.chr10.nnic@ZRANB1 transcript3442.chr10.nnic protein_coding 124916920,124942457,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774 124917766,124943307,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986458 Gene ID= ENSG00000019995.6 TPM= 8.67 Transcript Type= NA chr10 124916920 124986460 124916920 124986460 + transcript3450.chr10.nnic@ZRANB1 transcript3450.chr10.nnic protein_coding 124916920,124966594,124971965,124973645,124974200,124981709,124983175,124983459,124984774 124917272,124966781,124972118,124973716,124974398,124981829,124983304,124983688,124986460 Gene ID= ENSG00000019995.6 TPM= 2.87 Transcript Type= NA chr10 124988334 125138437 124988334 125138437 - transcript3433.chr10.nnic@CTBP2 transcript3433.chr10.nnic protein_coding 125138211,125110990,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988334 125138437,125111093,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 2.45 Transcript Type= NA chr10 124988333 125159937 124988333 125159937 - transcript3435.chr10.nnic@CTBP2 transcript3435.chr10.nnic protein_coding 125159752,125110990,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988333 125159937,125111093,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 2.45 Transcript Type= NA chr10 124988326 125159974 124988326 125159974 - transcript3436.chr10.nnic@CTBP2 transcript3436.chr10.nnic protein_coding 125159857,125110990,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988326 125159974,125111093,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 5.17 Transcript Type= NA chr10 124988326 125160214 124988326 125160214 - transcript3445.chr10.nic@CTBP2 transcript3445.chr10.nic protein_coding 125159857,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124988326 125160214,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 5.78 Transcript Type= NA chr10 124987770 125160563 124987770 125160563 - transcript3446.chr10.nic@CTBP2 transcript3446.chr10.nic protein_coding 125160319,125038997,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124987770 125160563,125039155,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 10.31 Transcript Type= NA chr10 124987856 125160549 124987856 125160549 - transcript3451.chr10.nnic@CTBP2 transcript3451.chr10.nnic protein_coding 125160319,125003338,125002960,124997964,124994469,124993855,124993202,124992695,124987856 125160549,125003492,125003104,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 2.16 Transcript Type= NA chr10 124988335 125000469 124988335 125000469 - transcript3454.chr10.nnic@CTBP2 transcript3454.chr10.nnic protein_coding 125000098,124997964,124994469,124993855,124993202,124992695,124988335 125000469,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 2.16 Transcript Type= NA chr10 124988333 125002985 124988333 125002985 - transcript3455.chr10.nnic@CTBP2 transcript3455.chr10.nnic protein_coding 125002780,124997964,124994469,124993855,124993202,124992695,124988333 125002985,124998170,124994683,124993985,124993329,124992812,124989698 Gene ID= ENSG00000175029.16 TPM= 2.16 Transcript Type= NA chr10 125707237 125719546 125707237 125719546 - ENST00000528844.1@FLJ37035 ENST00000528844.1 lincRNA 125719422,125709498,125707237 125719546,125709567,125707759 Gene ID= ENSG00000224023.10 TPM= 2.72 Transcript Type= lincRNA chr10 125719703 125764139 125719703 125764139 + ENST00000337623.7@EDRF1 ENST00000337623.7 protein_coding 125719703,125721204,125723068,125723811,125725318,125725682,125729358,125730288,125733404,125733635,125734072,125735644,125737918,125738295,125740463,125741001,125743058,125745707,125747536,125747863,125749412,125752799,125753694,125763301 125719915,125721412,125723134,125723936,125725442,125725838,125729479,125730399,125733551,125733743,125734183,125735904,125737989,125738445,125740651,125741201,125743276,125745930,125747694,125748012,125749565,125752914,125753845,125764139 Gene ID= ENSG00000107938.17 TPM= 6.34 Transcript Type= protein_coding chr10 125788574 125823288 125788574 125823288 - transcript3465.chr10.nnic@UROS transcript3465.chr10.nnic protein_coding 125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796790,125796103,125794880,125788574 125823288,125816525,125816260,125815130,125812288,125807487,125798145,125796861,125796188,125794978,125789005 Gene ID= ENSG00000188690.12 TPM= 2.72 Transcript Type= NA chr10 125788574 125823285 125788574 125823285 - transcript3473.chr10.nnic@UROS transcript3473.chr10.nnic protein_coding 125823207,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125788574 125823285,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125789005 Gene ID= ENSG00000188690.12 TPM= 1.81 Transcript Type= NA chr10 125788574 125823288 125788574 125823288 - transcript3475.chr10.nic@UROS transcript3475.chr10.nic protein_coding 125823029,125816437,125816177,125815034,125812214,125807413,125796103,125794880,125788574 125823288,125816525,125816260,125815130,125812288,125807487,125798145,125794978,125789005 Gene ID= ENSG00000188690.12 TPM= 2.72 Transcript Type= NA chr10 125788578 125823227 125788578 125823227 - ENST00000368797.8@UROS ENST00000368797.8 protein_coding 125823029,125816437,125816177,125815034,125812214,125807413,125798065,125796103,125794880,125788578 125823227,125816525,125816260,125815130,125812288,125807487,125798145,125796188,125794978,125789005 Gene ID= ENSG00000188690.12 TPM= 57.95 Transcript Type= protein_coding chr10 125823546 125853695 125823546 125853695 + ENST00000368759.5@BCCIP ENST00000368759.5 protein_coding 125823546,125826591,125827558,125830562,125831420,125833772,125841255,125853125 125823722,125826665,125827638,125830651,125831607,125833946,125841330,125853695 Gene ID= ENSG00000107949.16 TPM= 8.15 Transcript Type= protein_coding chr10 125823546 125836553 125823546 125836553 + ENST00000278100.10@BCCIP ENST00000278100.10 protein_coding 125823546,125826591,125827558,125830562,125831420,125833772,125836104 125823722,125826665,125827638,125830651,125831607,125833946,125836553 Gene ID= ENSG00000107949.16 TPM= 22.64 Transcript Type= protein_coding chr10 125823546 125842805 125823546 125842805 + ENST00000299130.7@BCCIP ENST00000299130.7 protein_coding 125823546,125826591,125827558,125830562,125831420,125833772,125841255 125823722,125826665,125827638,125830651,125831607,125833946,125842805 Gene ID= ENSG00000107949.16 TPM= 4.53 Transcript Type= protein_coding chr10 125836329 125896514 125836329 125896514 - transcript3477.chr10.nnic@DHX32 transcript3477.chr10.nnic protein_coding 125896218,125885365,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836329 125896514,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855 Gene ID= ENSG00000089876.11 TPM= 33.21 Transcript Type= NA chr10 125836329 125896514 125836329 125896514 - transcript3478.chr10.nnic@DHX32 transcript3478.chr10.nnic protein_coding 125896218,125885629,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836329 125896514,125885676,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855 Gene ID= ENSG00000089876.11 TPM= 2.42 Transcript Type= NA chr10 125836329 125896912 125836329 125896912 - transcript3480.chr10.nic@DHX32 transcript3480.chr10.nic protein_coding 125896218,125880543,125866990,125859603,125853961,125852543,125852293,125841743,125840847,125839001,125838206,125836329 125896912,125881071,125867183,125859975,125854203,125852642,125852451,125841934,125840996,125839188,125838387,125836855 Gene ID= ENSG00000089876.11 TPM= 44.07 Transcript Type= NA chr10 125896572 126009590 125896572 126009590 + transcript3482.chr10.nnic@FANK1 transcript3482.chr10.nnic protein_coding 125896572,125988551,125989430,125994826,125995417,125996550,125997420,126004884,126008407,126009054,126009222,126009373 125896655,125988675,125989447,125994960,125995498,125996624,125997485,126005049,126008550,126009131,126009266,126009590 Gene ID= ENSG00000203780.10 TPM= 1.81 Transcript Type= NA chr10 125896589 126009590 125896589 126009590 + transcript3485.chr10.nnic@FANK1 transcript3485.chr10.nnic protein_coding 125896589,125988551,125995302,125996550,125997420,126004884,126008407,126009054,126009222,126009373 125896655,125988675,125995498,125996624,125997485,126005049,126008550,126009131,126009266,126009590 Gene ID= ENSG00000203780.10 TPM= 1.81 Transcript Type= NA chr10 126905409 127452517 126905409 127452517 + ENST00000280333.9@DOCK1 ENST00000280333.9 protein_coding 126905409,126970702,126977948,126981918,126987521,126990455,126996748,126998092,126999354,127000172,127008732,127012295,127018710,127023200,127024685,127026352,127031650,127032137,127037719,127042625,127043064,127052681,127061668,127106231,127110248,127125474,127127669,127248008,127257335,127339006,127343646,127354669,127362064,127373781,127374058,127380082,127381278,127384790,127403055,127404325,127409037,127409313,127410840,127415152,127418365,127419666,127425874,127433283,127439027,127444126,127447394,127451332 126905563,126970785,126977988,126981973,126987617,126990603,126996883,126998249,126999435,127000307,127008804,127012374,127018835,127023324,127024783,127026424,127031753,127032320,127037816,127042714,127043164,127052815,127061776,127106301,127110354,127125601,127127764,127248109,127257429,127339084,127343746,127354727,127362212,127373866,127374214,127380122,127381368,127384909,127403144,127404429,127409178,127409391,127410924,127415238,127418541,127419749,127426011,127433428,127439225,127444279,127447545,127452517 Gene ID= ENSG00000150760.12 TPM= 15.39 Transcript Type= protein_coding chr10 126905407 127128091 126905407 127128091 + transcript3497.chr10.nic@DOCK1 transcript3497.chr10.nic protein_coding 126905407,126970702,126977948,126981918,126987521,126990455,126996748,126998092,126999354,127000172,127008732,127012232,127018710,127023200,127024685,127026352,127031650,127032137,127037719,127042625,127043064,127052681,127061668,127106231,127110248,127125474,127127669 126905563,126970785,126977988,126981973,126987617,126990603,126996883,126998249,126999435,127000307,127008804,127012374,127018835,127023324,127024783,127026424,127031753,127032320,127037816,127042714,127043164,127052815,127061776,127106301,127110354,127125601,127128091 Gene ID= ENSG00000150760.12 TPM= 1.81 Transcript Type= NA chr10 127907043 128085854 127907043 128085854 + transcript3500.chr10.nnic@PTPRE transcript3500.chr10.nnic protein_coding 127907043,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832,128085073 127907309,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128082940,128085854 Gene ID= ENSG00000132334.16 TPM= 2.72 Transcript Type= NA chr10 128047570 128085855 128047570 128085855 + ENST00000306042.9@PTPRE ENST00000306042.9 protein_coding 128047570,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832 128047683,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855 Gene ID= ENSG00000132334.16 TPM= 6.34 Transcript Type= protein_coding chr10 127907061 128085855 127907061 128085855 + ENST00000254667.7@PTPRE ENST00000254667.7 protein_coding 127907061,127982274,128040875,128047390,128047764,128049530,128056123,128060939,128061679,128063083,128066075,128068123,128069692,128070301,128070808,128072138,128073337,128076603,128077617,128079560,128082832 127907309,127982296,128040990,128047489,128047837,128049666,128056213,128061015,128061715,128063180,128066194,128068286,128069827,128070450,128070901,128072214,128073471,128076728,128077783,128079695,128085855 Gene ID= ENSG00000132334.16 TPM= 28.07 Transcript Type= protein_coding chr10 129467184 129768007 129467184 129768007 + ENST00000306010.7@MGMT ENST00000306010.7 protein_coding 129467184,129536241,129707895,129759202,129766788 129467296,129536377,129708043,129759341,129768007 Gene ID= ENSG00000170430.9 TPM= 49.8 Transcript Type= protein_coding chr10 130063900 130110817 130063900 130110817 - ENST00000637128.1@LINC00959 ENST00000637128.1 protein_coding 130110704,130079737,130079566,130063900 130110817,130079901,130079628,130064383 Gene ID= ENSG00000237489.3 TPM= 5.43 Transcript Type= protein_coding chr10 130136382 130182876 130136382 130182876 + transcript3515.chr10.nnic@GLRX3 transcript3515.chr10.nnic protein_coding 130136382,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130180113 130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130182876 Gene ID= ENSG00000108010.11 TPM= 2.72 Transcript Type= NA chr10 130136399 130182881 130136399 130182881 + ENST00000368644.5@GLRX3 ENST00000368644.5 protein_coding 130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342,130180113 130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179420,130182881 Gene ID= ENSG00000108010.11 TPM= 18.11 Transcript Type= protein_coding chr10 130136399 130179664 130136399 130179664 + ENST00000331244.9@GLRX3 ENST00000331244.9 protein_coding 130136399,130145211,130159995,130160796,130166507,130166919,130169433,130171584,130174867,130174997,130179342 130136512,130145319,130160069,130160997,130166679,130166980,130169490,130171636,130174906,130175089,130179664 Gene ID= ENSG00000108010.11 TPM= 57.05 Transcript Type= protein_coding chr10 131092391 131311721 131092391 131311721 - ENST00000368642.4@TCERG1L ENST00000368642.4 protein_coding 131311294,131309153,131308211,131260259,131166797,131163122,131146506,131134379,131116799,131104265,131098306,131092391 131311721,131309299,131308391,131260444,131166885,131163210,131146660,131134448,131116934,131104354,131098424,131093318 Gene ID= ENSG00000176769.9 TPM= 2.72 Transcript Type= protein_coding chr10 131900974 131956548 131900974 131956548 + transcript3522.chr10.nic@PPP2R2D transcript3522.chr10.nic protein_coding 131900974,131901238,131934458,131934894,131940031,131940582,131943968,131945295,131947530,131955684 131901155,131901330,131934555,131935006,131940196,131940694,131944145,131945459,131947791,131956548 Gene ID= ENSG00000175470.18 TPM= 7.54 Transcript Type= NA chr10 131900644 131959834 131900644 131959834 + ENST00000455566.5@PPP2R2D ENST00000455566.5 protein_coding 131900644,131901238,131934458,131940031,131940582,131943968,131945295,131947530,131955684 131901155,131901330,131934555,131940196,131940694,131944145,131945459,131947791,131959834 Gene ID= ENSG00000175470.18 TPM= 40.14 Transcript Type= protein_coding chr10 131901003 131956547 131901003 131956547 + transcript3529.chr10.nnic@PPP2R2D transcript3529.chr10.nnic protein_coding 131901003,131901238,131940031,131940582,131943968,131945295,131947530,131955684 131901155,131901330,131940196,131940694,131944145,131945459,131947791,131956547 Gene ID= ENSG00000175470.18 TPM= 5.73 Transcript Type= NA chr10 131966455 131982013 131966455 131982013 - ENST00000368636.8@BNIP3 ENST00000368636.8 protein_coding 131981761,131973793,131973034,131970864,131970638,131966455 131982013,131973943,131973118,131970970,131970787,131968569 Gene ID= ENSG00000176171.11 TPM= 387.57 Transcript Type= protein_coding chr10 132207490 132249093 132207490 132249093 - transcript3539.chr10.nic@STK32C transcript3539.chr10.nic protein_coding 132249030,132245900,132227977,132226795,132225747,132225527,132225233,132224407,132222861,132222641,132209034,132207490 132249093,132245955,132228128,132226968,132225784,132225616,132225336,132224523,132222986,132222772,132209101,132208151 Gene ID= ENSG00000165752.16 TPM= 3.17 Transcript Type= NA chr10 132207492 132307940 132207492 132307940 - ENST00000298630.7@STK32C ENST00000298630.7 protein_coding 132307572,132245900,132227977,132226795,132225747,132225527,132225233,132224407,132222861,132222641,132209034,132207492 132307940,132245955,132228128,132226968,132225784,132225616,132225336,132224523,132222986,132222772,132209101,132208151 Gene ID= ENSG00000165752.16 TPM= 12.22 Transcript Type= protein_coding chr10 132330281 132331837 132330281 132331837 - ENST00000456004.1@STK32C ENST00000456004.1 protein_coding 132331436,132330281 132331837,132330485 Gene ID= ENSG00000165752.16 TPM= 9.06 Transcript Type= protein_coding chr10 132332113 132365933 132332113 132365933 + transcript3549.chr10.nnic@LRRC27 transcript3549.chr10.nnic protein_coding 132332113,132333477,132337565,132342213,132344498,132347984,132351607,132355790,132361457,132365424,132365647 132332256,132333734,132337695,132342271,132344650,132348356,132351753,132355886,132361575,132365550,132365933 Gene ID= ENSG00000148814.17 TPM= 1.81 Transcript Type= NA chr10 132396177 132417830 132396177 132417830 + transcript3560.chr10.nnic@PWWP2B transcript3560.chr10.nnic protein_coding 132396177,132404626,132409762,132417061 132397351,132406289,132409879,132417830 Gene ID= ENSG00000171813.13 TPM= 5.43 Transcript Type= NA chr10 132397171 132417830 132397171 132417830 + transcript3571.chr10.nnic@PWWP2B transcript3571.chr10.nnic protein_coding 132397171,132404626,132417061 132397298,132405986,132417830 Gene ID= ENSG00000171813.13 TPM= 3.62 Transcript Type= NA chr10 132397171 132417830 132397171 132417830 + transcript3572.chr10.nnic@PWWP2B transcript3572.chr10.nnic protein_coding 132397171,132404626,132417061 132397298,132406289,132417830 Gene ID= ENSG00000171813.13 TPM= 2.72 Transcript Type= NA chr10 132408604 132417830 132408604 132417830 + transcript3576.chr10.nnic@PWWP2B transcript3576.chr10.nnic protein_coding 132408604,132409762,132417061 132408825,132409879,132417830 Gene ID= ENSG00000171813.13 TPM= 4.53 Transcript Type= NA chr10 132397168 132417863 132397168 132417863 + ENST00000305233.5@PWWP2B ENST00000305233.5 protein_coding 132397168,132404626,132417061 132397351,132406289,132417863 Gene ID= ENSG00000171813.13 TPM= 84.22 Transcript Type= protein_coding chr10 132537740 132783474 132537740 132783474 + transcript3585.chr10.nic@INPP5A transcript3585.chr10.nic protein_coding 132537740,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821,132749517,132749771,132765773,132777671,132780849,132781861,132782037 132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132726905,132749612,132749845,132765846,132777782,132780917,132781897,132783474 Gene ID= ENSG00000068383.18 TPM= 4.53 Transcript Type= NA chr10 132537740 132727347 132537740 132727347 + transcript3593.chr10.nic@INPP5A transcript3593.chr10.nic protein_coding 132537740,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821 132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132727347 Gene ID= ENSG00000068383.18 TPM= 5.43 Transcript Type= NA chr10 132537820 132783480 132537820 132783480 + ENST00000368594.7@INPP5A ENST00000368594.7 protein_coding 132537820,132607915,132645868,132650418,132690392,132697816,132708313,132710337,132726821,132749517,132749771,132765773,132777671,132780849,132781861,132782037 132538171,132607956,132645968,132650505,132690455,132697919,132708365,132710456,132726905,132749612,132749845,132765846,132777782,132780917,132781948,132783480 Gene ID= ENSG00000068383.18 TPM= 96.89 Transcript Type= protein_coding chr10 133160030 133186816 133160030 133186816 + transcript3599.chr10.nic@KNDC1 transcript3599.chr10.nic protein_coding 133160030,133167381,133168254,133183344,133183872,133185974 133160569,133167579,133168312,133183490,133183989,133186816 Gene ID= ENSG00000171798.17 TPM= 3.62 Transcript Type= NA chr10 133160252 133180843 133160252 133180843 + transcript3600.chr10.nnic@KNDC1 transcript3600.chr10.nnic protein_coding 133160252,133167381,133168254,133173931,133178835 133160569,133167579,133168312,133174096,133180843 Gene ID= ENSG00000171798.17 TPM= 4.98 Transcript Type= NA chr10 133160030 133180843 133160030 133180843 + transcript3604.chr10.nic@KNDC1 transcript3604.chr10.nic protein_coding 133160030,133167381,133168254,133178835 133160569,133167579,133168312,133180843 Gene ID= ENSG00000171798.17 TPM= 4.98 Transcript Type= NA chr10 133160210 133170618 133160210 133170618 + transcript3607.chr10.nic@KNDC1 transcript3607.chr10.nic protein_coding 133160210,133167381,133168254 133160569,133167579,133170618 Gene ID= ENSG00000171798.17 TPM= 10.87 Transcript Type= NA chr10 133160447 133226412 133160447 133226412 + ENST00000304613.7@KNDC1 ENST00000304613.7 protein_coding 133160447,133167381,133168254,133183344,133183872,133185974,133188539,133189598,133189752,133195663,133197058,133197675,133198337,133198578,133199458,133200375,133201501,133206685,133206856,133207137,133210611,133211422,133211679,133212716,133213645,133213972,133218831,133219031,133219955,133224659 133160569,133167579,133168312,133183490,133183989,133186674,133188653,133189669,133189813,133195821,133197135,133197768,133198499,133199266,133199602,133200460,133201898,133206778,133206953,133207351,133210724,133211569,133211858,133212922,133213727,133214122,133218953,133219090,133220112,133226412 Gene ID= ENSG00000171798.17 TPM= 20.83 Transcript Type= protein_coding chr10 133246478 133248139 133246478 133248139 - transcript3611.chr10.nnic@MIR202HG transcript3611.chr10.nnic antisense_RNA 133247791,133247554,133246478 133248139,133247719,133247050 Gene ID= ENSG00000166917.10 TPM= 16.3 Transcript Type= NA chr10 133246478 133250111 133246478 133250111 - transcript3612.chr10.nnic@MIR202HG transcript3612.chr10.nnic antisense_RNA 133249892,133247791,133246478 133250111,133247994,133247050 Gene ID= ENSG00000166917.10 TPM= 1.81 Transcript Type= NA chr10 133246478 133247891 133246478 133247891 - ENST00000553459.1@MIR202HG ENST00000553459.1 antisense_RNA 133247791,133246478 133247891,133247050 Gene ID= ENSG00000166917.10 TPM= 35.32 Transcript Type= antisense_RNA chr10 133262403 133276868 133262403 133276868 - ENST00000445355.7@ADAM8 ENST00000445355.7 protein_coding 133276772,133275484,133274159,133273951,133273762,133273254,133272957,133272798,133272416,133272193,133271806,133271528,133271200,133270881,133270736,133270360,133269897,133269445,133268748,133267929,133267352,133263688,133262403 133276868,133275587,133274235,133274029,133273838,133273443,133273019,133272866,133272585,133272274,133271954,133271705,133271289,133271070,133270805,133270510,133269974,133269529,133268862,133268118,133267417,133263765,133263233 Gene ID= ENSG00000151651.15 TPM= 2.72 Transcript Type= protein_coding chr10 133278630 133309156 133278630 133309156 - ENST00000368563.6@TUBGCP2 ENST00000368563.6 protein_coding 133308823,133302792,133299985,133299427,133297952,133293562,133293039,133292499,133289824,133288840,133288129,133285456,133285085,133283882,133283078,133282223,133281273,133278630 133309156,133302980,133300113,133299603,133298111,133293769,133293238,133292688,133289969,133289020,133288309,133285628,133285213,133284002,133283221,133282342,133281436,133279901 Gene ID= ENSG00000130640.13 TPM= 179.6 Transcript Type= protein_coding chr10 133308890 133313176 133308890 133313176 + transcript3634.chr10.nnic@ZNF511 transcript3634.chr10.nnic protein_coding 133308890,133309390,133309776,133310164,133311716,133312788 133309096,133309463,133309977,133310229,133311841,133313176 Gene ID= ENSG00000198546.14 TPM= 2.72 Transcript Type= NA chr10 133308941 133313162 133308941 133313162 + ENST00000359035.4@ZNF511 ENST00000359035.4 protein_coding 133308941,133309390,133309776,133310164,133311716 133309096,133309463,133309977,133310288,133313162 Gene ID= ENSG00000198546.14 TPM= 2.72 Transcript Type= protein_coding chr10 133355154 133358035 133355154 133358035 - ENST00000278025.8@FUOM ENST00000278025.8 protein_coding 133357923,133357187,133356943,133356640,133355738,133355154 133358035,133357255,133357013,133356738,133355811,133355436 Gene ID= ENSG00000148803.11 TPM= 6.79 Transcript Type= protein_coding chr10 133355160 133358025 133355160 133358025 - ENST00000368552.7@FUOM ENST00000368552.7 protein_coding 133357923,133357187,133356943,133356640,133355738,133355160 133358025,133357255,133357013,133356738,133355811,133355505 Gene ID= ENSG00000148803.11 TPM= 2.26 Transcript Type= protein_coding chr10 133362480 133373689 133362480 133373689 - ENST00000368547.3@ECHS1 ENST00000368547.3 protein_coding 133373246,133370560,133369904,133368923,133366889,133365976,133364658,133362480 133373689,133370757,133370031,133369022,133366993,133366095,133364725,133362933 Gene ID= ENSG00000127884.4 TPM= 522.5 Transcript Type= protein_coding chr10 133379234 133391693 133379234 133391693 + transcript3670.chr10.nnic@PAOX transcript3670.chr10.nnic protein_coding 133379234,133379999,133381460,133383960,133388956,133389590,133391312 133379497,133380485,133381659,133384302,133389068,133389747,133391693 Gene ID= ENSG00000148832.15 TPM= 2.72 Transcript Type= NA chr10 133379234 133385602 133379234 133385602 + transcript3674.chr10.nic@PAOX transcript3674.chr10.nic protein_coding 133379234,133379999,133381460,133383960 133379497,133380485,133381659,133385602 Gene ID= ENSG00000148832.15 TPM= 2.72 Transcript Type= NA chr10 133379234 133391694 133379234 133391694 + ENST00000278060.9@PAOX ENST00000278060.9 protein_coding 133379234,133379999,133381460,133383960,133388956,133389590,133391312 133379497,133380485,133381659,133384212,133389068,133389747,133391694 Gene ID= ENSG00000148832.15 TPM= 12.68 Transcript Type= protein_coding chr10 133394160 133422531 133394160 133422531 + transcript3667.chr10.nic@MTG1 transcript3667.chr10.nic protein_coding 133394160,133395713,133396163,133398435,133399170,133399529,133402692,133419480,133420026 133394332,133395777,133396267,133398515,133399226,133402245,133402773,133419592,133422531 Gene ID= ENSG00000148824.18 TPM= 13.58 Transcript Type= NA chr11 202924 207382 202924 207382 - ENST00000325147.13@BET1L ENST00000325147.13 protein_coding 207303,205952,202924 207382,206043,205667 Gene ID= ENSG00000177951.17 TPM= 8.15 Transcript Type= protein_coding chr11 202926 207428 202926 207428 - ENST00000382762.7@BET1L ENST00000382762.7 protein_coding 207303,205952,205611,202926 207428,206043,205667,205469 Gene ID= ENSG00000177951.17 TPM= 76.07 Transcript Type= protein_coding chr11 207477 215108 207477 215108 + transcript15.chr11.nic@RIC8A transcript15.chr11.nic protein_coding 207477,209271,209407,210571,211199,212416,212615,212837,213299,214288 208938,209318,210000,210662,211349,212511,212759,212981,213418,215108 Gene ID= ENSG00000177963.14 TPM= 5.43 Transcript Type= NA chr11 207482 215153 207482 215153 + transcript17.chr11.nic@RIC8A transcript17.chr11.nic protein_coding 207482,209175,209407,210571,211199,212416,212615,212837,213299,214230 208938,209318,210000,210662,211349,212511,212759,212981,213418,215153 Gene ID= ENSG00000177963.14 TPM= 37.79 Transcript Type= NA chr11 207511 215113 207511 215113 + ENST00000526104.5@RIC8A ENST00000526104.5 protein_coding 207511,209271,209407,210571,211199,212416,212615,212837,213299,214230 208938,209318,210000,210662,211349,212511,212759,212981,213418,215113 Gene ID= ENSG00000177963.14 TPM= 198.22 Transcript Type= protein_coding chr11 209069 215113 209069 215113 + ENST00000527696.5@RIC8A ENST00000527696.5 protein_coding 209069,210571,211199,212416,212615,212837,213299,214230 210000,210662,211349,212511,212759,212981,213418,215113 Gene ID= ENSG00000177963.14 TPM= 3.53 Transcript Type= protein_coding chr11 215068 236369 215068 236369 - transcript33.chr11.nic@SIRT3 transcript33.chr11.nic protein_coding 236194,233343,232983,230452,224078,218832,215068 236369,233534,233215,230706,224239,219041,216718 Gene ID= ENSG00000142082.14 TPM= 6.34 Transcript Type= NA chr11 215427 236379 215427 236379 - transcript35.chr11.nic@SIRT3 transcript35.chr11.nic protein_coding 236048,233343,232983,230452,224078,218778,215427 236379,233534,233215,230552,224239,219041,216718 Gene ID= ENSG00000142082.14 TPM= 12.68 Transcript Type= NA chr11 215427 236369 215427 236369 - transcript36.chr11.nic@SIRT3 transcript36.chr11.nic protein_coding 236194,233343,232983,230452,224078,218778,215427 236369,233534,233215,230552,224239,219041,216718 Gene ID= ENSG00000142082.14 TPM= 2.72 Transcript Type= NA chr11 215068 236349 215068 236349 - transcript40.chr11.nic@SIRT3 transcript40.chr11.nic protein_coding 236194,224078,218832,215068 236349,224239,219041,216718 Gene ID= ENSG00000142082.14 TPM= 3.62 Transcript Type= NA chr11 216179 236343 216179 236343 - ENST00000532837.5@SIRT3 ENST00000532837.5 protein_coding 236194,233343,232983,230452,224078,218832,216179 236343,233534,233215,230552,224239,219041,216718 Gene ID= ENSG00000142082.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr11 236977 252981 236977 252981 + ENST00000431206.6@PSMD13 ENST00000431206.6 protein_coding 236977,244041,244426,244675,247277,248776,248932,250803,251546,251820,252505 237144,244216,244469,244761,247448,248855,249057,250865,251626,251936,252981 Gene ID= ENSG00000185627.17 TPM= 3.62 Transcript Type= protein_coding chr11 237038 252981 237038 252981 + ENST00000382671.8@PSMD13 ENST00000382671.8 protein_coding 237038,238998,244161,244426,244675,247277,248776,248932,250803,251546,251820,252505 237144,239076,244216,244469,244761,247448,248855,249057,250865,251626,251936,252981 Gene ID= ENSG00000185627.17 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr11 289491 295687 289491 295687 + transcript54.chr11.nic@PGGHG transcript54.chr11.nic protein_coding 289491,290390,290678,291976,292546,292886,293163,293366,293594,293830,294099,294267,294556 290075,290600,291113,292095,292677,292997,293235,293502,293727,293925,294196,294478,295687 Gene ID= ENSG00000142102.15 TPM= 4.53 Transcript Type= NA chr11 313853 315272 313853 315272 + ENST00000408968.3@IFITM1 ENST00000408968.3 protein_coding 313853,314922 314356,315272 Gene ID= ENSG00000185885.15 TPM= 137.64 Transcript Type= protein_coding chr11 319669 321050 319669 321050 - ENST00000399808.4@IFITM3 ENST00000399808.4 protein_coding 320565,319669 321050,319990 Gene ID= ENSG00000142089.15 TPM= 526.12 Transcript Type= protein_coding chr11 405716 407135 405716 407135 - ENST00000526395.5@SIGIRR ENST00000526395.5 protein_coding 407062,406349,405716 407135,406538,406059 Gene ID= ENSG00000185187.12 TPM= 1.81 Transcript Type= protein_coding chr11 405716 417397 405716 417397 - ENST00000332725.7@SIGIRR ENST00000332725.7 protein_coding 417325,409868,408695,408073,407817,407425,407062,406843,406349,405716 417397,410027,408893,408206,407957,407568,407164,406993,406538,406059 Gene ID= ENSG00000185187.12 TPM= 4.07 Transcript Type= protein_coding chr11 405716 414976 405716 414976 - ENST00000431843.6@SIGIRR ENST00000431843.6 protein_coding 414823,409868,408695,408073,407817,407425,407062,406843,406349,405716 414976,410027,408893,408206,407957,407568,407164,406993,406538,406059 Gene ID= ENSG00000185187.12 TPM= 4.98 Transcript Type= protein_coding chr11 450272 491398 450272 491398 + transcript84.chr11.nic@PTDSS2 transcript84.chr11.nic protein_coding 450272,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420,491121 450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,490642,491398 Gene ID= ENSG00000174915.11 TPM= 12.68 Transcript Type= NA chr11 450272 491394 450272 491394 + transcript87.chr11.nnic@PTDSS2 transcript87.chr11.nnic protein_coding 450272,460187,473895,479085,486891,487420,488199,488529,489400,489588,489883,490420 450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491394 Gene ID= ENSG00000174915.11 TPM= 3.62 Transcript Type= NA chr11 450272 491393 450272 491393 + transcript91.chr11.nic@PTDSS2 transcript91.chr11.nic protein_coding 450272,460187,473895,479085,486939,487420,488529,489400,489588,489883,490420 450637,460288,473977,479152,487073,488312,488647,489514,489733,490068,491393 Gene ID= ENSG00000174915.11 TPM= 2.72 Transcript Type= NA chr11 450280 491387 450280 491387 + ENST00000308020.5@PTDSS2 ENST00000308020.5 protein_coding 450280,460187,473895,479085,486939,487420,488199,488529,489400,489588,489883,490420 450637,460288,473977,479152,487073,487470,488312,488647,489514,489733,490068,491387 Gene ID= ENSG00000174915.11 TPM= 66.1 Transcript Type= protein_coding chr11 494511 506853 494511 506853 - transcript109.chr11.nic@RNH1 transcript109.chr11.nic protein_coding 506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494511 506853,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 35.33 Transcript Type= NA chr11 494511 504727 494511 504727 - transcript119.chr11.nic@RNH1 transcript119.chr11.nic protein_coding 504427,502062,500484,499829,499015,498763,498457,497971,494883,494511 504727,502181,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 23.55 Transcript Type= NA chr11 494511 504709 494511 504709 - transcript123.chr11.nnic@RNH1 transcript123.chr11.nnic protein_coding 504427,502062,500484,499829,499015,498763,498457,497971,494883,494511 504709,502249,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 62.11 Transcript Type= NA chr11 494513 506821 494513 506821 - ENST00000397614.5@RNH1 ENST00000397614.5 protein_coding 506609,502062,500484,499829,499015,498763,498457,497971,494883,494513 506821,502249,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 14.57 Transcript Type= protein_coding chr11 494515 506800 494515 506800 - ENST00000397615.6@RNH1 ENST00000397615.6 protein_coding 506609,504824,502062,500484,499829,499015,498763,498457,497971,494883,494515 506800,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 160.84 Transcript Type= protein_coding chr11 494515 507253 494515 507253 - ENST00000397604.7@RNH1 ENST00000397604.7 protein_coding 507113,502062,500484,499829,499015,498763,498457,497971,494883,494515 507253,502181,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 124.85 Transcript Type= protein_coding chr11 494561 507300 494561 507300 - ENST00000356187.9@RNH1 ENST00000356187.9 protein_coding 507113,502062,500484,499829,499015,498763,498457,497971,494883,494561 507300,502249,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 159.38 Transcript Type= protein_coding chr11 494552 507221 494552 507221 - ENST00000354420.6@RNH1 ENST00000354420.6 protein_coding 507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494552 507221,504996,502249,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 39.84 Transcript Type= protein_coding chr11 494546 507218 494546 507218 - ENST00000533410.5@RNH1 ENST00000533410.5 protein_coding 507113,504824,502062,500484,499829,499015,498763,498457,497971,494883,494546 507218,504996,502181,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 47.99 Transcript Type= protein_coding chr11 494548 506785 494548 506785 - ENST00000438658.6@RNH1 ENST00000438658.6 protein_coding 506609,502062,500484,499829,499015,498763,498457,497971,494883,494548 506785,502181,500654,499999,499185,498933,498627,498141,495053,494778 Gene ID= ENSG00000023191.16 TPM= 6.34 Transcript Type= protein_coding chr11 532243 535550 532243 535550 - ENST00000417302.5@HRAS ENST00000417302.5 protein_coding 535416,534212,533766,533453,533277,532243 535550,534375,533944,533612,533358,532755 Gene ID= ENSG00000174775.16 TPM= 1.81 Transcript Type= protein_coding chr11 532242 535538 532242 535538 - ENST00000493230.5@HRAS ENST00000493230.5 protein_coding 535416,534212,533766,533453,533277,532631,532242 535538,534375,533944,533612,533358,532755,532522 Gene ID= ENSG00000174775.16 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr11 554864 560779 554864 560779 - ENST00000329451.7@LMNTD2 ENST00000329451.7 protein_coding 560683,558856,558614,558161,557884,557572,557399,556835,556492,556192,555996,555734,555305,554864 560779,558979,558766,558248,558039,557640,557487,557097,556588,556375,556115,555930,555503,555111 Gene ID= ENSG00000185522.8 TPM= 6.34 Transcript Type= protein_coding chr11 560924 564024 560924 564024 + transcript166.chr11.nic@RASSF7 transcript166.chr11.nic protein_coding 560924,561762,562079,563189,563396,563558 561033,561892,562776,563317,563478,564024 Gene ID= ENSG00000099849.14 TPM= 3.17 Transcript Type= NA chr11 560924 564024 560924 564024 + transcript168.chr11.nic@RASSF7 transcript168.chr11.nic protein_coding 560924,561762,562079,563189,563558 561033,561892,562776,563317,564024 Gene ID= ENSG00000099849.14 TPM= 4.98 Transcript Type= NA chr11 560956 564012 560956 564012 + ENST00000397582.7@RASSF7 ENST00000397582.7 protein_coding 560956,561762,562079,563189 561033,561892,562776,564012 Gene ID= ENSG00000099849.14 TPM= 16.3 Transcript Type= protein_coding chr11 565660 568420 565660 568420 - ENST00000500447.1@MIR210HG ENST00000500447.1 lincRNA 568352,565660 568420,567555 Gene ID= ENSG00000247095.2 TPM= 4.53 Transcript Type= lincRNA chr11 612553 615950 612553 615950 - transcript184.chr11.nic@IRF7 transcript184.chr11.nic protein_coding 615913,615345,615097,614797,614476,613951,613785,613206,612999,612553 615950,615647,615259,615007,614534,614037,613865,613595,613117,612800 Gene ID= ENSG00000185507.19 TPM= 1.81 Transcript Type= NA chr11 612553 615950 612553 615950 - transcript189.chr11.nic@IRF7 transcript189.chr11.nic protein_coding 615913,615097,614797,614476,613951,613785,613206,612999,612553 615950,615647,615007,614534,614037,613865,613595,613117,612800 Gene ID= ENSG00000185507.19 TPM= 2.72 Transcript Type= NA chr11 612559 615999 612559 615999 - ENST00000397574.6@IRF7 ENST00000397574.6 protein_coding 615913,615345,615097,614797,614476,614174,613951,613785,613206,612999,612559 615999,615647,615259,615007,614534,614399,614037,613865,613595,613117,612800 Gene ID= ENSG00000185507.19 TPM= 9.06 Transcript Type= protein_coding chr11 617259 624972 617259 624972 - transcript193.chr11.nnic@CDHR5 transcript193.chr11.nnic protein_coding 624818,624557,624213,621812,621562,621345,621080,620296,620067,619681,619474,619306,618599,617954,617259 624972,624732,624263,621904,621663,621455,621250,620386,620164,619881,619587,619390,618775,618111,617770 Gene ID= ENSG00000099834.18 TPM= 1.81 Transcript Type= NA chr11 644219 695045 644219 695045 - transcript239.chr11.nnic@DEAF1 transcript239.chr11.nnic protein_coding 694759,691501,688331,687911,686858,684898,680963,679688,678694,674536,659435,653962,644219 695045,691598,688460,688057,686997,684963,681089,679816,678822,674783,659796,654051,644654 Gene ID= ENSG00000177030.16 TPM= 4.68 Transcript Type= NA chr11 644219 695226 644219 695226 - transcript250.chr11.nic@DEAF1 transcript250.chr11.nic protein_coding 694679,691501,688331,687911,686858,684898,680963,679688,678694,674536,653962,644219 695226,691598,688460,688057,686997,684963,681089,679816,678822,674783,654051,644654 Gene ID= ENSG00000177030.16 TPM= 9.21 Transcript Type= NA chr11 706612 727727 706612 727727 + transcript212.chr11.nic@EPS8L2 transcript212.chr11.nic protein_coding 706612,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901 706813,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727727 Gene ID= ENSG00000177106.14 TPM= 7.34 Transcript Type= NA chr11 706171 727727 706171 727727 + transcript213.chr11.nic@EPS8L2 transcript213.chr11.nic protein_coding 706171,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722673,723241,724724,725728,726098,726304,726619,726901 706288,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722549,722805,723353,724829,725847,726170,726484,726751,727727 Gene ID= ENSG00000177106.14 TPM= 18.66 Transcript Type= NA chr11 706120 727727 706120 727727 + transcript229.chr11.nic@EPS8L2 transcript229.chr11.nic protein_coding 706120,709330,709553,710422,720062,720597,720830,721064,721285,721565,722673,723241,724724,725728,726098,726304,726619,726901 706288,709451,709608,710486,720223,720746,720909,721206,721352,722549,722805,723353,724829,725847,726170,726484,726751,727727 Gene ID= ENSG00000177106.14 TPM= 10.06 Transcript Type= NA chr11 706117 727724 706117 727724 + ENST00000533256.5@EPS8L2 ENST00000533256.5 protein_coding 706117,706677,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901 706288,706801,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727724 Gene ID= ENSG00000177106.14 TPM= 9.16 Transcript Type= protein_coding chr11 706113 727727 706113 727727 + ENST00000318562.12@EPS8L2 ENST00000318562.12 protein_coding 706113,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901 706288,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727727 Gene ID= ENSG00000177106.14 TPM= 72.54 Transcript Type= protein_coding chr11 706629 727051 706629 727051 + ENST00000530636.5@EPS8L2 ENST00000530636.5 protein_coding 706629,709330,709553,710422,720062,720597,720830,721064,721285,721565,721903,722091,722401,722673,723241,724724,725728,726098,726304,726619,726901 706801,709451,709608,710486,720223,720746,720909,721206,721352,721691,721991,722165,722549,722805,723353,724829,725847,726170,726484,726751,727051 Gene ID= ENSG00000177106.14 TPM= 4.61 Transcript Type= protein_coding chr11 695804 704127 695804 704127 + transcript262.chr11.nic@TMEM80 transcript262.chr11.nic protein_coding 695804,698869,700142,700615,702945,703800 695846,698888,700235,700707,703146,704127 Gene ID= ENSG00000177042.14 TPM= 13.58 Transcript Type= NA chr11 695643 704129 695643 704129 + ENST00000397512.7@TMEM80 ENST00000397512.7 protein_coding 695643,698869,700142,700615,702945 695822,698888,700235,700707,704129 Gene ID= ENSG00000177042.14 TPM= 23.54 Transcript Type= protein_coding chr11 747329 765024 747329 765024 + ENST00000319006.7@TALDO1 ENST00000319006.7 protein_coding 747329,755879,758950,760122,763344,763747,764288,764813 747578,756002,759057,760253,763519,763944,764433,765024 Gene ID= ENSG00000177156.10 TPM= 168.43 Transcript Type= protein_coding chr11 767217 777491 767217 777491 - transcript276.chr11.nnic@GATD1 transcript276.chr11.nnic protein_coding 777399,775066,774008,773522,772427,771333,770993,769807,767217 777491,775142,774113,773629,772521,771426,771104,770903,767873 Gene ID= ENSG00000177225.16 TPM= 11.47 Transcript Type= NA chr11 767225 777491 767225 777491 - transcript281.chr11.nnic@GATD1 transcript281.chr11.nnic protein_coding 777399,775066,774008,773522,772427,771333,770993,769925,767225 777491,775142,774113,773629,772521,771426,771104,770903,768039 Gene ID= ENSG00000177225.16 TPM= 4.23 Transcript Type= NA chr11 767225 777491 767225 777491 - transcript282.chr11.nnic@GATD1 transcript282.chr11.nnic protein_coding 777399,775066,774008,773522,772427,771333,770993,770020,767225 777491,775142,774113,773629,772521,771426,771104,770903,768232 Gene ID= ENSG00000177225.16 TPM= 4.23 Transcript Type= NA chr11 790474 795403 790474 795403 - transcript335.chr11.nic@SLC25A22 transcript335.chr11.nic protein_coding 795340,794987,794776,794458,793529,792870,792553,792304,792142,790474 795403,795169,794901,794513,793619,792988,792727,792458,792217,792068 Gene ID= ENSG00000177542.10 TPM= 4.23 Transcript Type= NA chr11 790475 798333 790475 798333 - ENST00000628067.2@SLC25A22 ENST00000628067.2 protein_coding 798217,794987,794776,794458,793529,792870,792553,792304,792142,790475 798333,795169,794901,794513,793619,792988,792727,792458,792217,792068 Gene ID= ENSG00000177542.10 TPM= 12.38 Transcript Type= protein_coding chr11 790475 796263 790475 796263 - ENST00000320230.9@SLC25A22 ENST00000320230.9 protein_coding 796043,794987,794776,794458,793529,792870,792553,792304,792142,790475 796263,795169,794901,794513,793619,792988,792727,792458,792217,792068 Gene ID= ENSG00000177542.10 TPM= 11.47 Transcript Type= protein_coding chr11 799178 809546 799178 809546 - transcript306.chr11.nnic@PIDD1 transcript306.chr11.nnic protein_coding 809412,805954,804094,803174,802682,802543,802195,801965,801445,801218,800985,800762,800543,800384,800131,799815,799178 809546,806095,804463,803587,802891,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 4.53 Transcript Type= NA chr11 799178 809554 799178 809554 - transcript309.chr11.nic@PIDD1 transcript309.chr11.nic protein_coding 809412,804094,803174,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799178 809554,804463,803587,802891,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 3.78 Transcript Type= NA chr11 799178 809546 799178 809546 - transcript310.chr11.nic@PIDD1 transcript310.chr11.nic protein_coding 809412,804094,803174,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799178 809546,806095,803587,802891,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 1.97 Transcript Type= NA chr11 799178 809545 799178 809545 - transcript312.chr11.nic@PIDD1 transcript312.chr11.nic protein_coding 809412,804094,803174,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799178 809545,804463,803647,802891,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 1.97 Transcript Type= NA chr11 799178 809546 799178 809546 - transcript319.chr11.nnic@PIDD1 transcript319.chr11.nnic protein_coding 809412,805954,804094,802682,802543,802195,801965,801445,801218,800985,800762,800543,800384,800131,799815,799178 809546,806095,804463,803587,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 3.62 Transcript Type= NA chr11 799178 809515 799178 809515 - transcript322.chr11.nic@PIDD1 transcript322.chr11.nic protein_coding 809412,804094,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799178 809515,804463,803647,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 1.97 Transcript Type= NA chr11 799178 809546 799178 809546 - transcript323.chr11.nic@PIDD1 transcript323.chr11.nic protein_coding 809412,804094,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799178 809546,806095,803647,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 1.97 Transcript Type= NA chr11 799184 805245 799184 805245 - ENST00000347755.9@PIDD1 ENST00000347755.9 protein_coding 805179,804094,803174,802682,802543,802195,801965,801445,801218,800985,800762,800543,800333,800131,799815,799184 805245,804463,803587,802891,802597,802396,802090,801624,801365,801120,800912,800666,800451,800244,800014,799565 Gene ID= ENSG00000177595.17 TPM= 1.06 Transcript Type= protein_coding chr11 809647 812875 809647 812875 + ENST00000321153.8@RPLP2 ENST00000321153.8 protein_coding 809647,810234,811597,812535,812760 810039,810357,811645,812633,812875 Gene ID= ENSG00000177600.8 TPM= 499.41 Transcript Type= protein_coding chr11 809984 812874 809984 812874 + ENST00000530797.5@RPLP2 ENST00000530797.5 protein_coding 809984,811597,812535,812760 810357,811645,812633,812874 Gene ID= ENSG00000177600.8 TPM= 9.51 Transcript Type= protein_coding chr11 819538 825227 819538 825227 + transcript347.chr11.nic@PNPLA2 transcript347.chr11.nic protein_coding 819538,821628,821958,822397,823527,823694,823998,824314,824523 819905,821860,822023,822606,823587,823855,824130,824436,825227 Gene ID= ENSG00000177666.16 TPM= 15.39 Transcript Type= NA chr11 818902 825573 818902 825573 + ENST00000336615.8@PNPLA2 ENST00000336615.8 protein_coding 818902,819574,821628,821958,822397,823527,823694,823998,824314,824523 818958,819905,821860,822023,822606,823587,823855,824130,824436,825573 Gene ID= ENSG00000177666.16 TPM= 297.02 Transcript Type= protein_coding chr11 827113 831985 827113 831985 + transcript358.chr11.nic@CRACR2B transcript358.chr11.nic protein_coding 827113,828260,828852,829360,829986,830250,830621,830866,831224,831535 827318,828772,828963,829540,830132,830337,830713,831032,831295,831985 Gene ID= ENSG00000177685.16 TPM= 1.81 Transcript Type= NA chr11 829307 831985 829307 831985 + ENST00000528694.1@CRACR2B ENST00000528694.1 protein_coding 829307,831535 831295,831985 Gene ID= ENSG00000177685.16 TPM= 1.81 Transcript Type= retained_intron chr11 832952 838834 832952 838834 + ENST00000397421.5@CD151 ENST00000397421.5 protein_coding 832952,836063,836251,836769,837250,837460,837942,838133 833026,836153,836442,836843,837354,837618,838028,838834 Gene ID= ENSG00000177697.17 TPM= 203.52 Transcript Type= protein_coding chr11 832952 838834 832952 838834 + ENST00000322008.8@CD151 ENST00000322008.8 protein_coding 832952,834530,836063,836251,836769,837250,837460,837942,838133 833026,834591,836153,836442,836843,837354,837618,838028,838834 Gene ID= ENSG00000177697.17 TPM= 253.33 Transcript Type= protein_coding chr11 839721 842545 839721 842545 - ENST00000322028.4@POLR2L ENST00000322028.4 protein_coding 842414,839721 842545,840480 Gene ID= ENSG00000177700.5 TPM= 366.75 Transcript Type= protein_coding chr11 842790 867117 842790 867117 + transcript397.chr11.nic@TSPAN4 transcript397.chr11.nic protein_coding 842790,847201,850288,862550,864437,865513,865918,866562 842915,847300,850367,862741,864511,865825,866001,867117 Gene ID= ENSG00000214063.10 TPM= 4.18 Transcript Type= NA chr11 844073 867117 844073 867117 + transcript402.chr11.nic@TSPAN4 transcript402.chr11.nic protein_coding 844073,847201,850288,862550,864437,865513,865918,866562 844186,847300,850367,862741,864511,865825,866001,867117 Gene ID= ENSG00000214063.10 TPM= 5.09 Transcript Type= NA chr11 842808 867111 842808 867111 + ENST00000397397.6@TSPAN4 ENST00000397397.6 protein_coding 842808,847201,850288,862550,864437,865513,865694,865918,866562 842915,847300,850367,862741,864511,865614,865825,866001,867111 Gene ID= ENSG00000214063.10 TPM= 55.54 Transcript Type= protein_coding chr11 842941 867116 842941 867116 + ENST00000397408.5@TSPAN4 ENST00000397408.5 protein_coding 842941,847201,850288,862550,864437,865513,865694,865918,866562 843050,847300,850367,862741,864511,865614,865825,866001,867116 Gene ID= ENSG00000214063.10 TPM= 5.73 Transcript Type= protein_coding chr11 844446 867116 844446 867116 + ENST00000397404.5@TSPAN4 ENST00000397404.5 protein_coding 844446,847201,850288,862550,864437,865513,865694,865918,866562 844587,847300,850367,862741,864511,865614,865825,866001,867116 Gene ID= ENSG00000214063.10 TPM= 9.35 Transcript Type= protein_coding chr11 844081 867116 844081 867116 + ENST00000397406.5@TSPAN4 ENST00000397406.5 protein_coding 844081,847201,850288,862550,864437,865513,865694,865918,866562 844186,847300,850367,862741,864511,865614,865825,866001,867116 Gene ID= ENSG00000214063.10 TPM= 51.91 Transcript Type= protein_coding chr11 868396 911461 868396 911461 - ENST00000323578.12@CHID1 ENST00000323578.12 protein_coding 910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,868396 911461,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956 Gene ID= ENSG00000177830.17 TPM= 91.31 Transcript Type= protein_coding chr11 880874 910814 880874 910814 - transcript419.chr11.nnic@CHID1 transcript419.chr11.nnic protein_coding 910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,881340,880874 910814,904859,903111,902330,900980,900110,899401,893519,884169,883303,882515,881293 Gene ID= ENSG00000177830.17 TPM= 4.07 Transcript Type= NA chr11 880874 910834 880874 910834 - transcript425.chr11.nic@CHID1 transcript425.chr11.nic protein_coding 910775,904706,902962,902198,900936,900004,899340,893427,884068,883148,880874 910834,904859,903111,902330,900980,900110,899401,893519,884169,883303,882515 Gene ID= ENSG00000177830.17 TPM= 5.89 Transcript Type= NA chr11 869767 910831 869767 910831 - ENST00000436108.6@CHID1 ENST00000436108.6 protein_coding 910775,908542,904706,902962,902198,900936,900004,899340,893427,884068,883148,870419,870121,869767 910831,908645,904859,903111,902330,900980,900110,899401,893519,884169,883303,870499,870163,869956 Gene ID= ENSG00000177830.17 TPM= 28.82 Transcript Type= protein_coding chr11 869762 910835 869762 910835 - ENST00000429789.6@CHID1 ENST00000429789.6 protein_coding 910775,904706,902962,902198,900936,900004,899340,884068,883148,870419,870121,869762 910835,904859,903111,902330,900980,900110,899401,884169,883303,870499,870163,869956 Gene ID= ENSG00000177830.17 TPM= 3.47 Transcript Type= protein_coding chr11 925392 1012239 925392 1012239 + transcript427.chr11.nnic@AP2A2 transcript427.chr11.nnic protein_coding 925392,959437,970169,972062,977095,981198,984645,985435,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548 925459,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012239 Gene ID= ENSG00000183020.13 TPM= 3.62 Transcript Type= NA chr11 925809 1012245 925809 1012245 + ENST00000332231.9@AP2A2 ENST00000332231.9 protein_coding 925809,959437,970169,972062,977095,981198,984645,985432,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548 926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012245 Gene ID= ENSG00000183020.13 TPM= 47.09 Transcript Type= protein_coding chr11 925881 1012239 925881 1012239 + ENST00000448903.6@AP2A2 ENST00000448903.6 protein_coding 925881,959437,970169,972062,977095,981198,984645,985435,986785,988552,992503,993284,993754,994072,1000432,1003722,1006528,1008012,1009100,1009328,1009683,1010548 926088,959505,970311,972255,977224,981299,984753,985582,986953,988689,992685,993381,993985,994245,1000598,1003804,1006617,1008135,1009216,1009397,1009817,1012239 Gene ID= ENSG00000183020.13 TPM= 28.07 Transcript Type= protein_coding chr11 1274371 1309622 1274371 1309622 - ENST00000317204.10@TOLLIP ENST00000317204.10 protein_coding 1309466,1295645,1290227,1288624,1286002,1274371 1309622,1295794,1290409,1288776,1286092,1277253 Gene ID= ENSG00000078902.15 TPM= 320.56 Transcript Type= protein_coding chr11 1469450 1480886 1469450 1480886 - transcript444.chr11.nnic@MOB2 transcript444.chr11.nnic protein_coding 1480774,1480393,1471295,1469450 1480886,1480486,1471419,1470488 Gene ID= ENSG00000182208.13 TPM= 4.53 Transcript Type= NA chr11 1556387 1559485 1556387 1559485 - transcript446.chr11.nic@DUSP8 transcript446.chr11.nic protein_coding 1558889,1558112,1557794,1556387 1559485,1558271,1557917,1557574 Gene ID= ENSG00000184545.10 TPM= 1.81 Transcript Type= NA chr11 1732410 1750580 1732410 1750580 - ENST00000382123.1@IFITM10 ENST00000382123.1 protein_coding 1750359,1749015,1747667,1732410 1750580,1749126,1748119,1735429 Gene ID= ENSG00000244242.1 TPM= 64.11 Transcript Type= nonsense_mediated_decay chr11 1734821 1763954 1734821 1763954 - ENST00000636615.1@AC068580.4 ENST00000636615.1 protein_coding 1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1747667,1734821 1763954,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1748119,1735429 Gene ID= ENSG00000250644.3 TPM= 11.77 Transcript Type= protein_coding chr11 1752752 1763992 1752752 1763992 - ENST00000236671.6@CTSD ENST00000236671.6 protein_coding 1763792,1761309,1759516,1758969,1757324,1754906,1753994,1753803,1752752 1763992,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1753670 Gene ID= ENSG00000117984.13 TPM= 5936.32 Transcript Type= protein_coding chr11 1752768 1763906 1752768 1763906 - ENST00000637815.1@CTSD ENST00000637815.1 protein_coding 1763792,1761309,1759516,1758969,1757324,1754924,1753994,1753803,1752768 1763906,1761468,1759639,1759087,1757556,1755028,1754138,1753901,1753670 Gene ID= ENSG00000117984.13 TPM= 4.64 Transcript Type= protein_coding chr11 1843434 1848167 1843434 1848167 . transcript507.chr11.nnic@NA transcript507.chr11.nnic NA 1843434,1844733,1846564 1843550,1844830,1848167 Gene ID= novel_gene_chr11_508 TPM= 2.72 Transcript Type= NA chr11 1844321 1848227 1844321 1848227 + transcript511.chr11.nnic@NA transcript511.chr11.nnic NA 1844321,1844733,1846564 1844373,1844830,1848227 Gene ID= novel_gene_chr11_512 TPM= 2.72 Transcript Type= NA chr11 1852970 1892263 1852970 1892263 + ENST00000311604.7@LSP1 ENST00000311604.7 protein_coding 1852970,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1853197,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263 Gene ID= ENSG00000130592.15 TPM= 6.91 Transcript Type= protein_coding chr11 1863220 1892267 1863220 1892267 + transcript526.chr11.nic@LSP1 transcript526.chr11.nic protein_coding 1863220,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1863614,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892267 Gene ID= ENSG00000130592.15 TPM= 48.61 Transcript Type= NA chr11 1864118 1892267 1864118 1892267 + transcript530.chr11.nic@LSP1 transcript530.chr11.nic protein_coding 1864118,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1864234,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892267 Gene ID= ENSG00000130592.15 TPM= 31.4 Transcript Type= NA chr11 1864647 1892267 1864647 1892267 + transcript531.chr11.nnic@LSP1 transcript531.chr11.nnic protein_coding 1864647,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1865262,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892267 Gene ID= ENSG00000130592.15 TPM= 43.18 Transcript Type= NA chr11 1869495 1892267 1869495 1892267 + transcript539.chr11.nic@LSP1 transcript539.chr11.nic protein_coding 1869495,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1869729,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892267 Gene ID= ENSG00000130592.15 TPM= 22.35 Transcript Type= NA chr11 1870252 1892263 1870252 1892263 + ENST00000612798.4@LSP1 ENST00000612798.4 protein_coding 1870252,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1870661,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263 Gene ID= ENSG00000130592.15 TPM= 4.19 Transcript Type= protein_coding chr11 1870518 1892267 1870518 1892267 + transcript546.chr11.nnic@LSP1 transcript546.chr11.nnic protein_coding 1870518,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1870759,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892267 Gene ID= ENSG00000130592.15 TPM= 27.78 Transcript Type= NA chr11 1870727 1892267 1870727 1892267 + transcript549.chr11.nic@LSP1 transcript549.chr11.nic protein_coding 1870727,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1870973,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892267 Gene ID= ENSG00000130592.15 TPM= 45.89 Transcript Type= NA chr11 1870244 1892263 1870244 1892263 + ENST00000406638.6@LSP1 ENST00000406638.6 protein_coding 1870244,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1871412,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263 Gene ID= ENSG00000130592.15 TPM= 54.69 Transcript Type= protein_coding chr11 1868673 1892263 1868673 1892263 + ENST00000405957.6@LSP1 ENST00000405957.6 protein_coding 1868673,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1868986,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263 Gene ID= ENSG00000130592.15 TPM= 308.46 Transcript Type= protein_coding chr11 1865165 1892263 1865165 1892263 + ENST00000381775.5@LSP1 ENST00000381775.5 protein_coding 1865165,1866465,1880087,1881432,1883419,1883932,1884280,1884500,1886732,1887237,1887474,1891773 1865262,1866911,1880224,1881596,1883560,1884024,1884323,1884581,1886866,1887314,1887576,1892263 Gene ID= ENSG00000130592.15 TPM= 5.1 Transcript Type= protein_coding chr11 1947017 1956598 1947017 1956598 + transcript581.chr11.nic@MRPL23 transcript581.chr11.nic protein_coding 1947017,1950899,1952127,1952782,1955611,1956256 1947379,1951021,1952209,1952855,1955781,1956598 Gene ID= ENSG00000214026.10 TPM= 3.62 Transcript Type= NA chr11 1947278 1956609 1947278 1956609 + ENST00000397298.7@MRPL23 ENST00000397298.7 protein_coding 1947278,1950899,1952127,1952782,1956256 1947379,1951021,1952209,1952855,1956609 Gene ID= ENSG00000214026.10 TPM= 81.5 Transcript Type= protein_coding chr11 1947341 1962838 1947341 1962838 + ENST00000381514.7@MRPL23 ENST00000381514.7 protein_coding 1947341,1950899,1952127,1952782,1962239 1947379,1951021,1952209,1952855,1962838 Gene ID= ENSG00000214026.10 TPM= 1.81 Transcript Type= protein_coding chr11 1995163 1997875 1995163 1997875 - ENST00000414790.5@H19 ENST00000414790.5 processed_transcript 1996518,1996287,1996079,1995876,1995163 1997875,1996421,1996191,1995998,1995794 Gene ID= ENSG00000130600.17 TPM= 530.2 Transcript Type= lincRNA chr11 2129112 2137290 2129112 2137290 - ENST00000381395.5@IGF2 ENST00000381395.5 protein_coding 2137188,2135367,2133517,2129112 2137290,2135529,2133665,2133223 Gene ID= ENSG00000167244.18 TPM= 166.17 Transcript Type= protein_coding chr11 2129112 2139389 2129112 2139389 - ENST00000416167.6@IGF2 ENST00000416167.6 protein_coding 2138229,2135367,2133517,2129112 2139389,2135529,2133665,2133223 Gene ID= ENSG00000167244.18 TPM= 167.07 Transcript Type= protein_coding chr11 2163929 2171877 2163929 2171877 - ENST00000352909.7@TH ENST00000352909.7 protein_coding 2171697,2169650,2168491,2168091,2167866,2167435,2166887,2166633,2166480,2166002,2165668,2165232,2163929 2171877,2169871,2168665,2168179,2167933,2167485,2167032,2166768,2166549,2166058,2165763,2165365,2164392 Gene ID= ENSG00000180176.14 TPM= 10.87 Transcript Type= protein_coding chr11 2377294 2397419 2377294 2397419 + ENST00000263645.9@CD81 ENST00000263645.9 protein_coding 2377294,2390412,2394095,2394972,2395416,2395869,2396628,2396804 2377615,2390526,2394192,2395046,2395520,2395970,2396714,2397419 Gene ID= ENSG00000110651.11 TPM= 322.37 Transcript Type= protein_coding chr11 2400488 2403878 2400488 2403878 + ENST00000380996.9@TSSC4 ENST00000380996.9 protein_coding 2400488,2402294,2402611,2402845 2400798,2402450,2402652,2403878 Gene ID= ENSG00000184281.14 TPM= 1.2 Transcript Type= protein_coding chr11 2400536 2403876 2400536 2403876 + ENST00000333256.10@TSSC4 ENST00000333256.10 protein_coding 2400536,2402294,2402611 2400798,2402450,2403876 Gene ID= ENSG00000184281.14 TPM= 28.82 Transcript Type= protein_coding chr11 2402293 2403875 2402293 2403875 + ENST00000451491.2@TSSC4 ENST00000451491.2 protein_coding 2402293,2402611 2402450,2403875 Gene ID= ENSG00000184281.14 TPM= 2.56 Transcript Type= protein_coding chr11 2444884 2849109 2444884 2849109 + transcript648.chr11.nic@KCNQ1 transcript648.chr11.nic protein_coding 2444884,2521479,2527928,2570628,2571325,2572013,2572846,2583435,2585212,2587570,2588713,2661961,2768844,2775960,2776986,2777976,2847767 2445484,2521570,2528018,2570754,2571403,2572109,2572986,2583545,2585307,2587692,2588854,2662081,2768919,2776054,2777032,2778037,2849109 Gene ID= ENSG00000053918.15 TPM= 34.47 Transcript Type= NA chr11 2444991 2849109 2444991 2849109 + ENST00000155840.9@KCNQ1 ENST00000155840.9 protein_coding 2444991,2527928,2570628,2571325,2572013,2572846,2583435,2585212,2587570,2588713,2661961,2768844,2775960,2776986,2777976,2847767 2445484,2528018,2570754,2571403,2572109,2572986,2583545,2585307,2587692,2588854,2662081,2768919,2776054,2777032,2778037,2849109 Gene ID= ENSG00000053918.15 TPM= 1220.73 Transcript Type= protein_coding chr11 2883218 2885813 2883218 2885813 - ENST00000440480.6@CDKN1C ENST00000440480.6 protein_coding 2885634,2884670,2883999,2883218 2885813,2885466,2884134,2883915 Gene ID= ENSG00000129757.12 TPM= 297.02 Transcript Type= protein_coding chr11 2883213 2885749 2883213 2885749 - ENST00000380725.1@CDKN1C ENST00000380725.1 protein_coding 2885634,2885202,2883999,2883213 2885749,2885466,2884134,2883915 Gene ID= ENSG00000129757.12 TPM= 18.11 Transcript Type= protein_coding chr11 2902193 2925246 2902193 2925246 + ENST00000312221.9@SLC22A18 ENST00000312221.9 protein_coding 2902193,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010 2902364,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246 Gene ID= ENSG00000110628.13 TPM= 26.26 Transcript Type= protein_coding chr11 2899721 2925246 2899721 2925246 + ENST00000347936.6@SLC22A18 ENST00000347936.6 protein_coding 2899721,2903214,2908233,2909196,2909578,2916622,2917988,2919307,2922102,2922436,2925010 2899806,2903489,2908330,2909356,2909710,2916740,2918095,2919407,2922203,2922556,2925246 Gene ID= ENSG00000110628.13 TPM= 1.81 Transcript Type= protein_coding chr11 2928273 2929455 2928273 2929455 - ENST00000314222.4@PHLDA2 ENST00000314222.4 protein_coding 2928896,2928273 2929455,2928667 Gene ID= ENSG00000181649.5 TPM= 8.15 Transcript Type= protein_coding chr11 2944431 2992126 2944431 2992126 - transcript801.chr11.nic@NAP1L4 transcript801.chr11.nic protein_coding 2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944431 2992126,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646 Gene ID= ENSG00000205531.12 TPM= 12.74 Transcript Type= NA chr11 2944431 2992126 2944431 2992126 - transcript811.chr11.nic@NAP1L4 transcript811.chr11.nic protein_coding 2991794,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431 2992126,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646 Gene ID= ENSG00000205531.12 TPM= 30.17 Transcript Type= NA chr11 2944431 2992377 2944431 2992377 - ENST00000620138.4@NAP1L4 ENST00000620138.4 protein_coding 2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2944431 2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2945646 Gene ID= ENSG00000205531.12 TPM= 91.3 Transcript Type= protein_coding chr11 2944437 2992377 2944437 2992377 - ENST00000380542.8@NAP1L4 ENST00000380542.8 protein_coding 2992254,2979207,2978284,2976024,2972102,2971448,2969803,2964680,2959770,2958399,2955744,2954527,2951780,2951259,2949227,2944437 2992377,2979237,2978342,2976123,2972243,2971534,2969934,2964751,2959909,2958544,2955766,2954646,2951809,2951315,2949264,2945646 Gene ID= ENSG00000205531.12 TPM= 34.93 Transcript Type= protein_coding chr11 3000922 3057437 3000922 3057437 - ENST00000380525.8@CARS ENST00000380525.8 protein_coding 3057343,3047753,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922 3057437,3048001,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248 Gene ID= ENSG00000110619.17 TPM= 9.35 Transcript Type= protein_coding chr11 3000922 3057613 3000922 3057613 - ENST00000397111.9@CARS ENST00000397111.9 protein_coding 3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000922 3057613,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248 Gene ID= ENSG00000110619.17 TPM= 36.52 Transcript Type= protein_coding chr11 3000928 3057459 3000928 3057459 - transcript825.chr11.nic@CARS transcript825.chr11.nic protein_coding 3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001970,3000928 3057459,3042256,3041031,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248 Gene ID= ENSG00000110619.17 TPM= 6.64 Transcript Type= NA chr11 3000928 3057459 3000928 3057459 - transcript831.chr11.nic@CARS transcript831.chr11.nic protein_coding 3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3001970,3000928 3057459,3042256,3041031,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3001248 Gene ID= ENSG00000110619.17 TPM= 2.72 Transcript Type= NA chr11 3000929 3057418 3000929 3057418 - ENST00000278224.13@CARS ENST00000278224.13 protein_coding 3057343,3042165,3040896,3039835,3039194,3038050,3029303,3028996,3026676,3020220,3019139,3018620,3018408,3017857,3017106,3015781,3012195,3006879,3005366,3002541,3001962,3000929 3057418,3042256,3040984,3039931,3039292,3038199,3029443,3029084,3026797,3020332,3019267,3018749,3018511,3017954,3017295,3015849,3012276,3006959,3005433,3002600,3002053,3001248 Gene ID= ENSG00000110619.17 TPM= 12.68 Transcript Type= protein_coding chr11 3087120 3165321 3087120 3165321 - transcript839.chr11.nnic@OSBPL5 transcript839.chr11.nnic protein_coding 3165216,3129013,3126473,3122348,3121997,3120421,3119547,3107771,3107263,3104193,3103239,3102183,3101603,3100158,3094237,3093746,3093527,3092867,3092432,3090558,3087120 3165321,3129169,3126555,3122428,3122098,3120624,3119631,3107945,3107455,3104377,3103320,3102281,3101699,3100256,3094334,3093835,3093663,3093052,3092558,3090696,3088343 Gene ID= ENSG00000021762.19 TPM= 2.26 Transcript Type= NA chr11 3087116 3165354 3087116 3165354 - ENST00000263650.11@OSBPL5 ENST00000263650.11 protein_coding 3165216,3129013,3126473,3122348,3121997,3120421,3119547,3107771,3107263,3104193,3103239,3102183,3101603,3100158,3094237,3093746,3093527,3092867,3092432,3090558,3089846,3087116 3165354,3129169,3126555,3122428,3122098,3120624,3119631,3107945,3107455,3104377,3103320,3102281,3101699,3100256,3094334,3093835,3093663,3093052,3092558,3090696,3089948,3088343 Gene ID= ENSG00000021762.19 TPM= 72.9 Transcript Type= protein_coding chr11 3357928 3379222 3357928 3379222 - ENST00000343338.11@ZNF195 ENST00000343338.11 protein_coding 3379038,3373577,3371577,3370975,3357928 3379222,3373675,3371703,3371070,3360565 Gene ID= ENSG00000005801.16 TPM= 3.62 Transcript Type= protein_coding chr11 3675010 3797792 3675010 3797792 - ENST00000324932.11@NUP98 ENST00000324932.11 protein_coding 3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3744509,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3712564,3706445,3705200,3702463,3700610,3699082,3695449,3693232,3691347,3685973,3683200,3679554,3676509,3675010 3797792,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3744649,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728,3706627,3705356,3702892,3700839,3699348,3695606,3693375,3691489,3686194,3683441,3679708,3676620,3676376 Gene ID= ENSG00000110713.15 TPM= 10.41 Transcript Type= protein_coding chr11 3675011 3797555 3675011 3797555 - transcript860.chr11.nic@NUP98 transcript860.chr11.nic protein_coding 3797400,3782042,3779156,3778873,3775882,3773632,3771748,3768581,3762902,3760539,3753316,3735191,3731391,3725103,3723157,3720712,3719412,3713818,3712564,3706445,3705200,3702463,3700610,3699082,3695449,3693232,3691347,3685973,3683200,3679554,3676509,3675011 3797555,3782145,3779257,3779049,3776021,3773739,3771928,3768744,3763039,3760626,3753408,3735324,3731578,3725219,3723455,3720825,3719550,3713995,3712728,3706627,3705356,3702892,3700839,3699348,3695606,3693375,3691489,3686194,3683441,3679708,3676620,3676376 Gene ID= ENSG00000110713.15 TPM= 5.89 Transcript Type= NA chr11 3797819 3826352 3797819 3826352 + ENST00000300730.10@PGAP2 ENST00000300730.10 protein_coding 3797819,3808294,3811250,3823883,3824270,3825020,3825328 3797982,3808315,3811424,3824135,3824364,3825128,3826352 Gene ID= ENSG00000148985.19 TPM= 9.06 Transcript Type= protein_coding chr11 3826978 3840983 3826978 3840983 - ENST00000351018.4@RHOG ENST00000351018.4 protein_coding 3840894,3826978 3840983,3828206 Gene ID= ENSG00000177105.9 TPM= 41.66 Transcript Type= protein_coding chr11 3855162 4093213 3855162 4093213 + transcript888.chr11.nnic@STIM1 transcript888.chr11.nnic protein_coding 3855162,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4084673,4086477,4091282 3855450,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4084765,4086543,4093213 Gene ID= ENSG00000167323.11 TPM= 12.68 Transcript Type= NA chr11 3855162 4093213 3855162 4093213 + transcript892.chr11.nnic@STIM1 transcript892.chr11.nnic protein_coding 3855162,3855645,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282 3855450,3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093213 Gene ID= ENSG00000167323.11 TPM= 8.15 Transcript Type= NA chr11 3855702 4093209 3855702 4093209 + ENST00000300737.8@STIM1 ENST00000300737.8 protein_coding 3855702,3967552,4023873,4055526,4059281,4070026,4074502,4082184,4082882,4083263,4086477,4091282 3856409,3967682,4023987,4055637,4059396,4070203,4074679,4082351,4082982,4083498,4086543,4093209 Gene ID= ENSG00000167323.11 TPM= 26.26 Transcript Type= protein_coding chr11 4094809 4138876 4094809 4138876 + ENST00000300738.9@RRM1 ENST00000300738.9 protein_coding 4094809,4101993,4106046,4107435,4109644,4111601,4111900,4118320,4119845,4121604,4122141,4123183,4126684,4127035,4129074,4132286,4133563,4135082,4138195 4095031,4102081,4106223,4107535,4109703,4111640,4112062,4118461,4119928,4121765,4122220,4123384,4126833,4127256,4129150,4132421,4133658,4135270,4138876 Gene ID= ENSG00000167325.14 TPM= 105.04 Transcript Type= protein_coding chr11 4384902 4393696 4384902 4393696 - ENST00000254436.7@TRIM21 ENST00000254436.7 protein_coding 4393633,4390002,4389654,4388300,4386968,4386157,4384902 4393696,4390458,4389749,4388530,4386990,4386257,4385853 Gene ID= ENSG00000132109.9 TPM= 28.98 Transcript Type= protein_coding chr11 4598672 4608259 4598672 4608259 - ENST00000300747.9@TRIM68 ENST00000300747.9 protein_coding 4608027,4605079,4603245,4602152,4601664,4601027,4598672 4608259,4605561,4603340,4602412,4601686,4601127,4600826 Gene ID= ENSG00000167333.12 TPM= 22.64 Transcript Type= protein_coding chr11 5225464 5227071 5225464 5227071 - ENST00000335295.4@HBB ENST00000335295.4 protein_coding 5226930,5226577,5225464 5227071,5226799,5225726 Gene ID= ENSG00000244734.3 TPM= 123.15 Transcript Type= protein_coding chr11 5596109 5612952 5596109 5612952 + ENST00000278302.9@TRIM6 ENST00000278302.9 protein_coding 5596109,5603246,5604534,5605337,5608372,5610145,5610535,5610777 5596181,5603735,5604629,5605567,5608394,5610245,5610561,5612952 Gene ID= ENSG00000121236.20 TPM= 3.62 Transcript Type= protein_coding chr11 5596656 5612952 5596656 5612952 + ENST00000380097.7@TRIM6 ENST00000380097.7 protein_coding 5596656,5603246,5604534,5605337,5608372,5610145,5610535,5610777 5596914,5603735,5604629,5605567,5608394,5610245,5610561,5612952 Gene ID= ENSG00000121236.20 TPM= 4.53 Transcript Type= protein_coding chr11 5624983 5644398 5624983 5644398 + ENST00000429814.2@TRIM34 ENST00000429814.2 protein_coding 5624983,5632255,5633804,5634631,5641167,5642406,5642817,5643144 5625060,5632754,5633899,5634861,5641189,5642506,5642843,5644398 Gene ID= ENSG00000258659.6 TPM= 22.19 Transcript Type= protein_coding chr11 5625000 5644393 5625000 5644393 + transcript919.chr11.nic@TRIM34 transcript919.chr11.nic protein_coding 5625000,5632255,5633804,5634631,5641167,5642406 5625060,5632754,5633899,5634861,5641189,5644393 Gene ID= ENSG00000258659.6 TPM= 3.17 Transcript Type= NA chr11 5663231 5685110 5663231 5685110 - transcript928.chr11.nic@TRIM5 transcript928.chr11.nic protein_coding 5685016,5679761,5679074,5678204,5667689,5665981,5665656,5663231 5685110,5680238,5679169,5678434,5667711,5666081,5665682,5665395 Gene ID= ENSG00000132256.18 TPM= 6.7 Transcript Type= NA chr11 5663608 5685073 5663608 5685073 - transcript932.chr11.nic@TRIM5 transcript932.chr11.nic protein_coding 5684868,5679761,5679074,5678204,5667689,5665656,5663608 5685073,5680238,5679169,5678434,5667711,5665682,5665395 Gene ID= ENSG00000132256.18 TPM= 2.17 Transcript Type= NA chr11 5663557 5685063 5663557 5685063 - ENST00000380034.7@TRIM5 ENST00000380034.7 protein_coding 5684868,5679761,5679074,5678204,5667689,5665981,5665656,5663557 5685063,5680238,5679169,5678434,5667711,5666081,5665682,5665395 Gene ID= ENSG00000132256.18 TPM= 13.95 Transcript Type= protein_coding chr11 5663617 5685042 5663617 5685042 - ENST00000396847.7@TRIM5 ENST00000396847.7 protein_coding 5684868,5679761,5679074,5678204,5667689,5665981,5663617 5685042,5680238,5679169,5678434,5667711,5666081,5665682 Gene ID= ENSG00000132256.18 TPM= 2.17 Transcript Type= protein_coding chr11 5689689 5710863 5689689 5710863 + ENST00000379965.7@TRIM22 ENST00000379965.7 protein_coding 5689689,5696167,5697248,5698315,5706594,5708173,5708577,5709053 5689899,5696655,5697343,5698545,5706616,5708273,5708603,5710863 Gene ID= ENSG00000132274.15 TPM= 14.49 Transcript Type= protein_coding chr11 5689756 5710862 5689756 5710862 + transcript935.chr11.nic@TRIM22 transcript935.chr11.nic protein_coding 5689756,5696167,5697248,5706594,5708173,5708577,5709053 5689899,5696655,5698545,5706616,5708273,5708603,5710862 Gene ID= ENSG00000132274.15 TPM= 4.53 Transcript Type= NA chr11 6211335 6234657 6211335 6234657 - transcript937.chr11.nnic@FAM160A2 transcript937.chr11.nnic protein_coding 6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6217371,6214710,6214411,6211335 6234657,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867 Gene ID= ENSG00000051009.10 TPM= 4.53 Transcript Type= NA chr11 6211335 6234668 6211335 6234668 - transcript939.chr11.nnic@FAM160A2 transcript939.chr11.nnic protein_coding 6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6217371,6214733,6214411,6211335 6234668,6224660,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867 Gene ID= ENSG00000051009.10 TPM= 3.92 Transcript Type= NA chr11 6211335 6234661 6211335 6234661 - transcript941.chr11.nnic@FAM160A2 transcript941.chr11.nnic protein_coding 6234544,6224379,6224065,6223080,6222811,6222442,6218971,6218600,6217371,6214733,6214411,6211335 6234661,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867 Gene ID= ENSG00000051009.10 TPM= 2.11 Transcript Type= NA chr11 6211335 6234633 6211335 6234633 - transcript944.chr11.nic@FAM160A2 transcript944.chr11.nic protein_coding 6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6214733,6214411,6211335 6234633,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214573,6211867 Gene ID= ENSG00000051009.10 TPM= 3.62 Transcript Type= NA chr11 6211335 6234616 6211335 6234616 - ENST00000449352.6@FAM160A2 ENST00000449352.6 protein_coding 6234544,6224379,6223610,6223080,6222811,6222442,6218971,6218600,6217371,6214733,6214411,6211335 6234616,6224707,6224248,6223238,6222897,6222609,6219050,6218763,6218150,6214911,6214573,6211867 Gene ID= ENSG00000051009.10 TPM= 49.2 Transcript Type= protein_coding chr11 6390463 6394995 6390463 6394995 + transcript948.chr11.nic@SMPD1 transcript948.chr11.nic protein_coding 6390463,6391384,6393216,6393617,6393896,6394178 6390916,6392156,6393387,6393693,6394041,6394995 Gene ID= ENSG00000166311.9 TPM= 2.26 Transcript Type= NA chr11 6390411 6394993 6390411 6394993 + transcript950.chr11.nnic@SMPD1 transcript950.chr11.nnic protein_coding 6390411,6391384,6393216,6393617,6393896,6394219 6390916,6392156,6393387,6393693,6394041,6394993 Gene ID= ENSG00000166311.9 TPM= 2.26 Transcript Type= NA chr11 6390464 6394997 6390464 6394997 + transcript952.chr11.nic@SMPD1 transcript952.chr11.nic protein_coding 6390464,6391384,6393617,6393896,6394198 6390916,6392196,6393693,6394041,6394997 Gene ID= ENSG00000166311.9 TPM= 3.17 Transcript Type= NA chr11 6390473 6394991 6390473 6394991 + ENST00000534405.5@SMPD1 ENST00000534405.5 protein_coding 6390473,6391384,6393216,6393617,6393896,6394198 6390916,6392196,6393387,6393693,6394041,6394991 Gene ID= ENSG00000166311.9 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr11 6395093 6419114 6395093 6419114 - transcript958.chr11.nnic@APBB1 transcript958.chr11.nnic protein_coding 6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395093 6419114,6411361,6403837,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701 Gene ID= ENSG00000166313.18 TPM= 9.51 Transcript Type= NA chr11 6395093 6419114 6395093 6419114 - transcript961.chr11.nic@APBB1 transcript961.chr11.nic protein_coding 6418985,6410627,6403647,6403488,6403319,6403145,6402576,6401574,6401345,6400989,6396100,6395786,6395093 6419114,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401429,6401072,6396215,6395962,6395701 Gene ID= ENSG00000166313.18 TPM= 3.62 Transcript Type= NA chr11 6395125 6419070 6395125 6419070 - ENST00000299402.10@APBB1 ENST00000299402.10 protein_coding 6418985,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125 6419070,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701 Gene ID= ENSG00000166313.18 TPM= 91.91 Transcript Type= protein_coding chr11 6395125 6419414 6395125 6419414 - ENST00000311051.7@APBB1 ENST00000311051.7 protein_coding 6419346,6410627,6403647,6403488,6403319,6403145,6402576,6402082,6401574,6401345,6400989,6396100,6395786,6395125 6419414,6411361,6403822,6403544,6403404,6403208,6402725,6402209,6401688,6401429,6401072,6396215,6395962,6395701 Gene ID= ENSG00000166313.18 TPM= 14.94 Transcript Type= protein_coding chr11 6431049 6441064 6431049 6441064 - ENST00000265983.7@HPX ENST00000265983.7 protein_coding 6440881,6440672,6440467,6440165,6438356,6437440,6437046,6431887,6431641,6431049 6441064,6440730,6440538,6440286,6438509,6437652,6437177,6432017,6431803,6431470 Gene ID= ENSG00000110169.10 TPM= 1.81 Transcript Type= protein_coding chr11 6448617 6473984 6448617 6473984 - ENST00000359518.7@TRIM3 ENST00000359518.7 protein_coding 6473791,6473084,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448617 6473984,6473248,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180 Gene ID= ENSG00000110171.19 TPM= 1.2 Transcript Type= protein_coding chr11 6448615 6473984 6448615 6473984 - ENST00000345851.7@TRIM3 ENST00000345851.7 protein_coding 6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6450551,6449306,6448615 6473984,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449446,6449180 Gene ID= ENSG00000110171.19 TPM= 18.41 Transcript Type= protein_coding chr11 6448614 6473968 6448614 6473968 - transcript971.chr11.nic@TRIM3 transcript971.chr11.nic protein_coding 6473791,6465565,6458065,6457696,6457296,6456297,6456072,6451271,6450892,6449306,6448614 6473968,6465732,6458296,6457847,6457476,6457029,6456175,6451438,6451060,6450621,6449180 Gene ID= ENSG00000110171.19 TPM= 4.83 Transcript Type= NA chr11 6476517 6481354 6476517 6481354 - transcript973.chr11.nic@ARFIP2 transcript973.chr11.nic protein_coding 6481231,6480323,6479972,6479140,6478738,6478579,6478041,6477718,6476517 6481354,6480463,6480068,6479258,6478959,6478652,6478198,6477892,6477268 Gene ID= ENSG00000132254.12 TPM= 2.72 Transcript Type= NA chr11 6476519 6481436 6476519 6481436 - ENST00000396777.7@ARFIP2 ENST00000396777.7 protein_coding 6481231,6480323,6479972,6479140,6478738,6478041,6477718,6476519 6481436,6480463,6480068,6479258,6478959,6478198,6477892,6477268 Gene ID= ENSG00000132254.12 TPM= 40.75 Transcript Type= protein_coding chr11 6476526 6481354 6476526 6481354 - transcript985.chr11.nic@ARFIP2 transcript985.chr11.nic protein_coding 6481231,6480323,6479972,6479140,6478738,6478041,6476526 6481354,6480463,6480068,6479258,6478959,6478198,6477892 Gene ID= ENSG00000132254.12 TPM= 2.72 Transcript Type= NA chr11 6481447 6484679 6481447 6484679 + ENST00000254616.10@TIMM10B ENST00000254616.10 protein_coding 6481447,6481757,6482045 6481555,6481852,6484679 Gene ID= ENSG00000132286.11 TPM= 65.2 Transcript Type= protein_coding chr11 6481508 6483058 6481508 6483058 + ENST00000533379.1@TIMM10B ENST00000533379.1 protein_coding 6481508,6481757,6482045,6482840 6481555,6481852,6482289,6483058 Gene ID= ENSG00000132286.11 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr11 6603758 6610833 6603758 6610833 + ENST00000420936.6@ILK ENST00000420936.6 protein_coding 6603758,6604226,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462 6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610833 Gene ID= ENSG00000166333.13 TPM= 231.82 Transcript Type= protein_coding chr11 6603731 6610870 6603731 6610870 + ENST00000299421.8@ILK ENST00000299421.8 protein_coding 6603731,6604180,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462 6603822,6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870 Gene ID= ENSG00000166333.13 TPM= 85.53 Transcript Type= protein_coding chr11 6603816 6610870 6603816 6610870 + ENST00000396751.6@ILK ENST00000396751.6 protein_coding 6603816,6608046,6608394,6608694,6608884,6609071,6609299,6609512,6609724,6609936,6610148,6610462 6604360,6608211,6608489,6608790,6608967,6609156,6609408,6609639,6609845,6610035,6610278,6610870 Gene ID= ENSG00000166333.13 TPM= 10.37 Transcript Type= protein_coding chr11 6610842 6612667 6610842 6612667 - ENST00000299424.8@TAF10 ENST00000299424.8 protein_coding 6611958,6611664,6611388,6611189,6610842 6612667,6611818,6611452,6611303,6611011 Gene ID= ENSG00000166337.9 TPM= 136.74 Transcript Type= protein_coding chr11 6612763 6619461 6612763 6619461 - ENST00000299427.10@TPP1 ENST00000299427.10 protein_coding 6619384,6619196,6618776,6617626,6617301,6616975,6616661,6616315,6616005,6615442,6615171,6614866,6612763 6619461,6619267,6618915,6617776,6617428,6617153,6616859,6616503,6616074,6615562,6615329,6614991,6614686 Gene ID= ENSG00000166340.15 TPM= 258.91 Transcript Type= protein_coding chr11 6612772 6619354 6612772 6619354 - ENST00000533371.5@TPP1 ENST00000533371.5 protein_coding 6619196,6618776,6617626,6617301,6616975,6616661,6616315,6616005,6615442,6615171,6614866,6612772 6619354,6618915,6617776,6617428,6617153,6616859,6616503,6616074,6615562,6615329,6614991,6614686 Gene ID= ENSG00000166340.15 TPM= 31.31 Transcript Type= protein_coding chr11 6680782 6683401 6680782 6683401 - ENST00000288937.6@MRPL17 ENST00000288937.6 protein_coding 6683123,6682747,6680782 6683401,6682815,6682402 Gene ID= ENSG00000158042.8 TPM= 78.78 Transcript Type= protein_coding chr11 6681951 6683296 6681951 6683296 - ENST00000529958.1@MRPL17 ENST00000529958.1 protein_coding 6682747,6681951 6683296,6682402 Gene ID= ENSG00000158042.8 TPM= 4.53 Transcript Type= retained_intron chr11 7251950 7469042 7251950 7469042 + ENST00000318881.10@SYT9 ENST00000318881.10 protein_coding 7251950,7303039,7313395,7416042,7417957,7420506,7466792 7252331,7303390,7313941,7416162,7418128,7420635,7469042 Gene ID= ENSG00000170743.16 TPM= 1.81 Transcript Type= protein_coding chr11 7485482 7511377 7485482 7511377 + ENST00000329293.3@OLFML1 ENST00000329293.3 protein_coding 7485482,7488127,7509398 7486004,7488415,7511377 Gene ID= ENSG00000183801.7 TPM= 6.34 Transcript Type= protein_coding chr11 7513770 7653756 7513770 7653756 + ENST00000299492.8@PPFIBP2 ENST00000299492.8 protein_coding 7513770,7549440,7565553,7593132,7597560,7610291,7620935,7625777,7628285,7629459,7630925,7632867,7634495,7635552,7639732,7641479,7642298,7648387,7648800,7649147,7649532,7650840,7651656,7653024 7514121,7549539,7565767,7593224,7597673,7610422,7621027,7625891,7628346,7629534,7631028,7632934,7634552,7635593,7639870,7641620,7642426,7648537,7648911,7649235,7649654,7650965,7651844,7653756 Gene ID= ENSG00000166387.11 TPM= 15.39 Transcript Type= protein_coding chr11 7665100 7673501 7665100 7673501 - ENST00000299498.10@CYB5R2 ENST00000299498.10 protein_coding 7673419,7672748,7672451,7669625,7669205,7668478,7667728,7666451,7665100 7673501,7672891,7672523,7669731,7669334,7668561,7667813,7666550,7665546 Gene ID= ENSG00000166394.14 TPM= 1.81 Transcript Type= protein_coding chr11 7970251 8001862 7970251 8001862 + ENST00000533626.5@EIF3F ENST00000533626.5 protein_coding 7970251,7981670,7986898,7991781,7992084,7992887,7994426,7994982,7995254,7995945 7970307,7981783,7987716,7991851,7992163,7993024,7994517,7995118,7995367,8001862 Gene ID= ENSG00000175390.13 TPM= 185.64 Transcript Type= protein_coding chr11 7987320 7996169 7987320 7996169 + ENST00000309828.4@EIF3F ENST00000309828.4 protein_coding 7987320,7991781,7992084,7992887,7994426,7994982,7995254,7995945 7987716,7991851,7992163,7993024,7994517,7995118,7995367,7996169 Gene ID= ENSG00000175390.13 TPM= 180.2 Transcript Type= protein_coding chr11 8108942 8169055 8108942 8169055 - ENST00000343202.8@RIC3 ENST00000343202.8 protein_coding 8168866,8139967,8138272,8137378,8126659,8108942 8169055,8140193,8138347,8137471,8126804,8111137 Gene ID= ENSG00000166405.14 TPM= 15.39 Transcript Type= protein_coding chr11 8133995 8169048 8133995 8169048 - transcript1050.chr11.nic@RIC3 transcript1050.chr11.nic protein_coding 8168866,8139967,8138272,8137378,8133995 8169048,8140193,8138347,8137471,8135844 Gene ID= ENSG00000166405.14 TPM= 1.81 Transcript Type= NA chr11 8391866 8594259 8391866 8594259 - transcript1053.chr11.nnic@STK33 transcript1053.chr11.nnic protein_coding 8594083,8480410,8477250,8476687,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391866 8594259,8480614,8477283,8476751,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710 Gene ID= ENSG00000130413.15 TPM= 1.81 Transcript Type= NA chr11 8391866 8594299 8391866 8594299 - transcript1057.chr11.nnic@STK33 transcript1057.chr11.nnic protein_coding 8594083,8477250,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391866 8594299,8477283,8474816,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710 Gene ID= ENSG00000130413.15 TPM= 1.81 Transcript Type= NA chr11 8391866 8594246 8391866 8594246 - transcript1058.chr11.nnic@STK33 transcript1058.chr11.nnic protein_coding 8594083,8477250,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391866 8594246,8477283,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710 Gene ID= ENSG00000130413.15 TPM= 1.81 Transcript Type= NA chr11 8391866 8594295 8391866 8594295 - transcript1062.chr11.nnic@STK33 transcript1062.chr11.nnic protein_coding 8594083,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391866 8594295,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710 Gene ID= ENSG00000130413.15 TPM= 3.62 Transcript Type= NA chr11 8391871 8593956 8391871 8593956 - ENST00000396672.5@STK33 ENST00000396672.5 protein_coding 8593744,8474681,8473163,8464709,8461805,8457341,8454744,8452822,8440678,8436027,8435494,8413495,8391871 8593956,8475066,8473276,8464822,8461909,8457479,8454832,8452906,8440753,8436139,8435579,8413692,8392710 Gene ID= ENSG00000130413.15 TPM= 1.81 Transcript Type= protein_coding chr11 8682411 8689872 8682411 8689872 + ENST00000314138.10@RPL27A ENST00000314138.10 protein_coding 8682411,8683202,8684006,8684718,8685678 8682816,8683265,8684081,8684892,8689872 Gene ID= ENSG00000166441.12 TPM= 231.82 Transcript Type= protein_coding chr11 8682810 8685848 8682810 8685848 + ENST00000530022.5@RPL27A ENST00000530022.5 protein_coding 8682810,8684006,8684718,8685678 8683265,8684081,8684892,8685848 Gene ID= ENSG00000166441.12 TPM= 32.6 Transcript Type= protein_coding chr11 8682792 8685848 8682792 8685848 + ENST00000532359.5@RPL27A ENST00000532359.5 protein_coding 8682792,8683202,8684006,8684823,8685678 8682816,8683265,8684081,8684892,8685848 Gene ID= ENSG00000166441.12 TPM= 7.24 Transcript Type= protein_coding chr11 8693351 8718064 8693351 8718064 - transcript1103.chr11.nic@ST5 transcript1103.chr11.nic protein_coding 8717741,8715603,8714610,8713998,8712551,8711122,8710845,8707777,8707085,8702572,8699213,8698933,8697525,8696427,8695463,8693351 8718064,8715818,8714706,8714042,8712735,8711231,8710914,8707854,8707225,8702720,8699390,8698974,8697636,8696666,8695549,8694130 Gene ID= ENSG00000166444.18 TPM= 27.13 Transcript Type= NA chr11 8693352 8810840 8693352 8810840 - ENST00000313726.10@ST5 ENST00000313726.10 protein_coding 8810517,8750621,8729950,8726073,8717741,8715603,8714610,8713998,8712551,8711122,8710845,8707777,8707085,8702572,8699213,8698933,8697525,8696427,8695463,8693352 8810840,8750725,8731209,8726209,8717892,8715818,8714706,8714042,8712735,8711231,8710914,8707854,8707225,8702720,8699390,8698974,8697636,8696666,8695549,8694130 Gene ID= ENSG00000166444.18 TPM= 136.66 Transcript Type= protein_coding chr11 8911140 8920084 8911140 8920084 + ENST00000309377.8@AKIP1 ENST00000309377.8 protein_coding 8911140,8911444,8912453,8914826,8917287,8919337 8911223,8911671,8912533,8914930,8917367,8920084 Gene ID= ENSG00000166452.11 TPM= 14.04 Transcript Type= protein_coding chr11 8911139 8920084 8911139 8920084 + ENST00000299576.9@AKIP1 ENST00000299576.9 protein_coding 8911139,8911444,8914826,8917287,8919337 8911223,8911671,8914930,8917367,8920084 Gene ID= ENSG00000166452.11 TPM= 19.47 Transcript Type= protein_coding chr11 8947294 8964773 8947294 8964773 - ENST00000534025.5@TMEM9B ENST00000534025.5 protein_coding 8964209,8962092,8956190,8953203,8947294 8964773,8962183,8956298,8953337,8948475 Gene ID= ENSG00000175348.10 TPM= 104.14 Transcript Type= protein_coding chr11 8947294 8964441 8947294 8964441 - ENST00000309134.9@TMEM9B ENST00000309134.9 protein_coding 8964209,8956190,8953203,8947294 8964441,8956298,8953337,8948475 Gene ID= ENSG00000175348.10 TPM= 4.53 Transcript Type= protein_coding chr11 8980574 9004000 8980574 9004000 - transcript1119.chr11.nic@NRIP3 transcript1119.chr11.nic protein_coding 9003762,8988118,8987548,8984072,8983875,8980574 9004000,8988282,8987630,8984124,8983969,8983560 Gene ID= ENSG00000175352.10 TPM= 1.81 Transcript Type= NA chr11 8980576 9004049 8980576 9004049 - ENST00000309166.7@NRIP3 ENST00000309166.7 protein_coding 9003762,8988118,8987548,8985711,8984072,8983875,8980576 9004049,8988282,8987630,8985850,8984124,8983969,8983560 Gene ID= ENSG00000175352.10 TPM= 19.02 Transcript Type= protein_coding chr11 9019479 9091716 9019479 9091716 - transcript1120.chr11.nic@SCUBE2 transcript1120.chr11.nic protein_coding 9091396,9089707,9079384,9074481,9069370,9066697,9065891,9060408,9059303,9055793,9053637,9053099,9052746,9050606,9047943,9047356,9033626,9030758,9029884,9027364,9025702,9021876,9019479 9091716,9089829,9079509,9074615,9069495,9066813,9065980,9060524,9059425,9055909,9053759,9053215,9052832,9050710,9048098,9047562,9033796,9030925,9030045,9027561,9025854,9021955,9021197 Gene ID= ENSG00000175356.12 TPM= 6.34 Transcript Type= NA chr11 9020886 9091716 9020886 9091716 - transcript1123.chr11.nnic@SCUBE2 transcript1123.chr11.nnic protein_coding 9091396,9089707,9079384,9074481,9069370,9066697,9065891,9060408,9059303,9055793,9050606,9047943,9047356,9033626,9030758,9029884,9027364,9025702,9021876,9020886 9091716,9089829,9079509,9074615,9069495,9066813,9065980,9060524,9059425,9055909,9050710,9048098,9047562,9033796,9030925,9030045,9027561,9025854,9021955,9021197 Gene ID= ENSG00000175356.12 TPM= 1.81 Transcript Type= NA chr11 9020391 9091601 9020391 9091601 - ENST00000309263.7@SCUBE2 ENST00000309263.7 protein_coding 9091396,9089707,9079384,9074481,9069370,9066697,9065891,9060408,9059303,9055793,9053637,9053099,9050606,9047943,9047356,9033626,9030758,9029884,9027364,9025702,9021876,9020391 9091601,9089829,9079509,9074615,9069495,9066813,9065980,9060524,9059425,9055909,9053759,9053215,9050710,9048098,9047562,9033796,9030925,9030045,9027561,9025854,9021955,9021197 Gene ID= ENSG00000175356.12 TPM= 1.81 Transcript Type= protein_coding chr11 9138829 9265416 9138829 9265416 - transcript1124.chr11.nnic@DENND5A transcript1124.chr11.nnic protein_coding 9265284,9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9138829 9265416,9265105,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9139854 Gene ID= ENSG00000184014.7 TPM= 10.41 Transcript Type= NA chr11 9138834 9265350 9138834 9265350 - transcript1125.chr11.nic@DENND5A transcript1125.chr11.nic protein_coding 9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9140189,9138834 9265350,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9140248,9139854 Gene ID= ENSG00000184014.7 TPM= 4.07 Transcript Type= NA chr11 9138829 9265405 9138829 9265405 - transcript1130.chr11.nic@DENND5A transcript1130.chr11.nic protein_coding 9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9142722,9141940,9138829 9265405,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9142845,9142108,9139854 Gene ID= ENSG00000184014.7 TPM= 3.17 Transcript Type= NA chr11 9138825 9265390 9138825 9265390 - ENST00000328194.7@DENND5A ENST00000328194.7 protein_coding 9264961,9207561,9206673,9203660,9193494,9180767,9178858,9178132,9170627,9169856,9165836,9160713,9152358,9150680,9150081,9147030,9145670,9144995,9144097,9143403,9142722,9141940,9138825 9265390,9207632,9206782,9204317,9193681,9181084,9179073,9178366,9170777,9169949,9165967,9160865,9152442,9150764,9150209,9147151,9145815,9145113,9144278,9143485,9142845,9142108,9139854 Gene ID= ENSG00000184014.7 TPM= 50.26 Transcript Type= protein_coding chr11 9280671 9314780 9280671 9314780 - ENST00000528080.5@TMEM41B ENST00000528080.5 protein_coding 9314321,9299584,9295259,9288442,9287702,9286455,9280671 9314780,9299701,9295387,9288535,9287806,9286593,9283593 Gene ID= ENSG00000166471.10 TPM= 30.79 Transcript Type= protein_coding chr11 9460965 9528524 9460965 9528524 + ENST00000396602.6@ZNF143 ENST00000396602.6 protein_coding 9460965,9471302,9472677,9473941,9474550,9478390,9479472,9494646,9496303,9497675,9501091,9508619,9512448,9516201,9525240,9527530 9461076,9471420,9472769,9474024,9474633,9478586,9479546,9494765,9496378,9497800,9501270,9508846,9512596,9516362,9525386,9528524 Gene ID= ENSG00000166478.9 TPM= 13.58 Transcript Type= protein_coding chr11 9575541 9589764 9575541 9589764 + transcript1144.chr11.nic@WEE1 transcript1144.chr11.nic protein_coding 9575541,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449 9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589764 Gene ID= ENSG00000166483.10 TPM= 5.43 Transcript Type= NA chr11 9573681 9589207 9573681 9589207 + ENST00000450114.6@WEE1 ENST00000450114.6 protein_coding 9573681,9575888,9576230,9576487,9577142,9581532,9585258,9585442,9586449,9586711,9588449 9574509,9576093,9576293,9576659,9577263,9581678,9585353,9585527,9586619,9586856,9589207 Gene ID= ENSG00000166483.10 TPM= 3.62 Transcript Type= protein_coding chr11 9664077 9752991 9664077 9752991 + ENST00000318950.10@SWAP70 ENST00000318950.10 protein_coding 9664077,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181,9747858,9749087,9749864 9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9740347,9748056,9749183,9752991 Gene ID= ENSG00000133789.14 TPM= 44.37 Transcript Type= protein_coding chr11 9664135 9741953 9664135 9741953 + ENST00000524817.5@SWAP70 ENST00000524817.5 protein_coding 9664135,9694146,9713466,9724658,9728053,9729343,9732529,9738213,9740181 9664278,9694286,9713639,9724885,9728199,9729451,9732710,9738320,9741953 Gene ID= ENSG00000133789.14 TPM= 1.81 Transcript Type= retained_intron chr11 9778667 10294207 9778667 10294207 - ENST00000256190.12@SBF2 ENST00000256190.12 protein_coding 10294015,10193902,10042844,10031048,10029765,10028452,10002557,10000914,9998266,9993921,9992990,9992415,9989497,9968341,9963773,9961957,9895943,9858226,9856458,9853540,9852676,9850023,9846956,9845565,9842625,9839498,9832224,9829356,9816840,9812532,9808901,9808000,9795831,9790556,9789109,9787634,9785125,9784351,9781507,9778667 10294207,10193987,10042981,10031170,10029875,10028557,10002689,10001022,9998379,9993998,9993103,9992543,9989595,9968545,9963882,9962106,9896011,9858396,9856720,9853712,9852749,9850218,9847083,9845740,9842770,9839696,9832420,9829496,9817024,9812708,9809002,9808185,9795957,9790683,9789342,9787738,9785318,9784438,9781638,9780516 Gene ID= ENSG00000133812.15 TPM= 5.43 Transcript Type= protein_coding chr11 10304680 10307397 10304680 10307397 + ENST00000278175.9@ADM ENST00000278175.9 protein_coding 10304680,10305680,10305949,10306332 10305229,10305798,10306098,10307397 Gene ID= ENSG00000148926.9 TPM= 19.02 Transcript Type= protein_coding chr11 10450551 10507130 10450551 10507130 + transcript1156.chr11.nnic@AMPD3 transcript1156.chr11.nnic protein_coding 10450551,10461515,10478526,10482063,10484820,10487235,10493349,10494899,10495570,10496812,10500086,10501470,10502721,10504549,10505708 10450764,10461740,10478730,10482225,10485039,10487364,10493543,10495030,10495733,10496938,10500249,10501590,10502894,10504659,10507130 Gene ID= ENSG00000133805.15 TPM= 5.89 Transcript Type= NA chr11 10450639 10507130 10450639 10507130 + transcript1160.chr11.nic@AMPD3 transcript1160.chr11.nic protein_coding 10450639,10461515,10482063,10484820,10487235,10493349,10494899,10495570,10496812,10500086,10501470,10502721,10504549,10505708 10451043,10461740,10482225,10485039,10487364,10493543,10495030,10495733,10496938,10500249,10501590,10502894,10504659,10507130 Gene ID= ENSG00000133805.15 TPM= 4.98 Transcript Type= NA chr11 10511678 10541217 10511678 10541217 - ENST00000265981.6@RNF141 ENST00000265981.6 protein_coding 10541122,10534016,10530643,10525192,10519034,10511678 10541217,10534205,10530751,10525373,10519141,10515066 Gene ID= ENSG00000110315.6 TPM= 76.07 Transcript Type= protein_coding chr11 10541268 10599931 10541268 10599931 + transcript1180.chr11.nic@MRVI1-AS1 transcript1180.chr11.nic antisense_RNA 10541268,10594117,10599691 10541542,10594228,10599931 Gene ID= ENSG00000177112.7 TPM= 2.72 Transcript Type= NA chr11 10555410 10568686 10555410 10568686 - transcript1177.chr11.nic@LYVE1 transcript1177.chr11.nic protein_coding 10568448,10564203,10563940,10559816,10555410 10568686,10564374,10564079,10560800,10559297 Gene ID= ENSG00000133800.8 TPM= 14.49 Transcript Type= NA chr11 10573091 10693551 10573091 10693551 - transcript1166.chr11.nic@MRVI1 transcript1166.chr11.nic protein_coding 10693462,10690265,10652025,10633968,10631991,10629538,10628751,10627973,10627716,10625966,10623778,10609728,10606742,10604405,10603120,10600918,10594146,10593492,10591548,10581867,10580455,10573091 10693551,10690369,10652182,10634071,10632061,10629711,10628828,10628025,10627760,10626583,10623856,10609851,10606772,10604545,10603251,10601059,10594195,10593599,10591612,10581986,10580589,10576575 Gene ID= ENSG00000072952.18 TPM= 9.96 Transcript Type= NA chr11 10573091 10604477 10573091 10604477 - transcript1170.chr11.nnic@MRVI1 transcript1170.chr11.nnic protein_coding 10604324,10603120,10600918,10593492,10591548,10581867,10580455,10573091 10604477,10603251,10601059,10593599,10591612,10581986,10580589,10576575 Gene ID= ENSG00000072952.18 TPM= 2.72 Transcript Type= NA chr11 10751242 10779753 10751242 10779753 + transcript1185.chr11.nnic@CTR9 transcript1185.chr11.nnic protein_coding 10751242,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10772520,10773127,10774012,10775207,10775521,10778679 10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10772655,10773273,10774169,10775303,10775633,10779753 Gene ID= ENSG00000198730.7 TPM= 1.81 Transcript Type= NA chr11 10750987 10779743 10750987 10779743 + ENST00000361367.6@CTR9 ENST00000361367.6 protein_coding 10750987,10752672,10754958,10755678,10756749,10760173,10761947,10763431,10763643,10764112,10764308,10764548,10766402,10767806,10768074,10768343,10770210,10770487,10771545,10772520,10773127,10774012,10775207,10775521,10778679 10751457,10752770,10755197,10755795,10756838,10760321,10762054,10763538,10763879,10764201,10764436,10764731,10766490,10767991,10768161,10768491,10770326,10770632,10771616,10772655,10773273,10774169,10775303,10775633,10779743 Gene ID= ENSG00000198730.7 TPM= 78.78 Transcript Type= protein_coding chr11 10852704 10858073 10852704 10858073 - ENST00000432999.6@ZBED5 ENST00000432999.6 protein_coding 10857862,10856144,10852704 10858073,10856257,10855118 Gene ID= ENSG00000236287.7 TPM= 1.81 Transcript Type= protein_coding chr11 10858198 10879277 10858198 10879277 + transcript1224.chr11.nnic@ZBED5-AS1 transcript1224.chr11.nnic antisense_RNA 10858198,10865261,10878381 10858351,10865327,10879277 Gene ID= ENSG00000247271.6 TPM= 1.81 Transcript Type= NA chr11 10858259 10879276 10858259 10879276 + ENST00000501079.5@ZBED5-AS1 ENST00000501079.5 antisense_RNA 10858259,10865261,10878381 10858366,10865327,10879276 Gene ID= ENSG00000247271.6 TPM= 27.17 Transcript Type= antisense_RNA chr11 11270865 11622002 11270865 11622002 - transcript1232.chr11.nnic@GALNT18 transcript1232.chr11.nnic protein_coding 11621359,11448744,11432621,11379081,11377182,11372515,11332694,11327086,11293029,11270865 11622002,11448936,11432787,11379264,11377379,11372629,11332831,11327181,11293193,11271290 Gene ID= ENSG00000110328.5 TPM= 2.72 Transcript Type= NA chr11 11270876 11622005 11270876 11622005 - ENST00000227756.4@GALNT18 ENST00000227756.4 protein_coding 11621359,11448744,11432621,11379081,11377182,11372515,11340819,11332694,11327086,11293029,11270876 11622005,11448936,11432787,11379264,11377379,11372629,11341004,11332831,11327181,11293193,11271290 Gene ID= ENSG00000110328.5 TPM= 37.13 Transcript Type= protein_coding chr11 11841968 11959151 11841968 11959151 + transcript1238.chr11.nnic@USP47 transcript1238.chr11.nnic protein_coding 11841968,11873800,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001 11842224,11873915,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11959151 Gene ID= ENSG00000170242.17 TPM= 6.79 Transcript Type= NA chr11 11841975 11956421 11841975 11956421 + ENST00000527733.5@USP47 ENST00000527733.5 protein_coding 11841975,11880177,11884467,11891968,11897597,11902715,11903263,11905399,11920156,11920342,11922724,11929434,11930044,11930696,11933004,11933831,11936303,11938257,11940429,11942335,11947945,11948478,11949889,11950364,11952741,11954897,11955034,11956001 11842224,11880380,11884580,11892106,11897693,11902860,11903342,11905548,11920251,11920494,11922891,11929565,11930120,11930751,11933116,11933935,11936510,11938372,11940548,11943112,11948120,11948558,11950004,11950482,11952871,11954944,11955164,11956421 Gene ID= ENSG00000170242.17 TPM= 17.66 Transcript Type= protein_coding chr11 11962853 12009217 11962853 12009217 - transcript1255.chr11.nic@DKK3 transcript1255.chr11.nic protein_coding 12008370,12002300,11998696,11968395,11966954,11965809,11962853 12009217,12002437,11998779,11968487,11967098,11965965,11964686 Gene ID= ENSG00000050165.17 TPM= 74.12 Transcript Type= NA chr11 11963106 12009370 11963106 12009370 - ENST00000326932.8@DKK3 ENST00000326932.8 protein_coding 12009172,12008370,12002300,11998696,11968395,11966954,11965809,11963106 12009370,12008608,12002437,11998779,11968487,11967098,11965965,11964686 Gene ID= ENSG00000050165.17 TPM= 112.6 Transcript Type= protein_coding chr11 11963106 12009082 11963106 12009082 - ENST00000396505.6@DKK3 ENST00000396505.6 protein_coding 12008870,12008370,12002300,11998696,11968395,11966954,11965809,11963106 12009082,12008608,12002437,11998779,11968487,11967098,11965965,11964686 Gene ID= ENSG00000050165.17 TPM= 16.62 Transcript Type= protein_coding chr11 12110577 12263782 12110577 12263782 + transcript1261.chr11.nic@MICAL2 transcript1261.chr11.nic protein_coding 12110577,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12249184,12255643,12256785,12258468,12259795 12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12249246,12255750,12256971,12258556,12263782 Gene ID= ENSG00000133816.13 TPM= 3.17 Transcript Type= NA chr11 12110577 12263782 12110577 12263782 + transcript1262.chr11.nic@MICAL2 transcript1262.chr11.nic protein_coding 12110577,12138390,12162079,12204250,12208023,12209497,12213255,12216219,12220201,12221644,12222617,12223411,12224673,12226171,12227025,12236177,12239436,12256785,12258468,12259795 12110726,12138460,12162419,12204457,12208139,12209598,12213410,12216319,12220458,12221759,12222743,12223501,12224820,12226370,12227131,12236245,12239585,12256971,12258556,12263782 Gene ID= ENSG00000133816.13 TPM= 6.79 Transcript Type= NA chr11 12377185 12530801 12377185 12530801 + ENST00000334956.12@PARVA ENST00000334956.12 protein_coding 12377185,12473745,12473913,12477847,12496458,12504314,12508584,12511514,12513299,12513997,12517610,12518445,12527849 12377783,12473834,12473983,12477949,12496598,12504429,12508642,12511533,12513360,12514065,12517711,12518517,12530801 Gene ID= ENSG00000197702.11 TPM= 55.24 Transcript Type= protein_coding chr11 13277826 13387263 13277826 13387263 + transcript1271.chr11.nic@ARNTL transcript1271.chr11.nic protein_coding 13277826,13309987,13326413,13349945,13354301,13355226,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596 13277923,13310059,13326467,13350070,13354448,13355296,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387263 Gene ID= ENSG00000133794.17 TPM= 5.05 Transcript Type= NA chr11 13277745 13388048 13277745 13388048 + transcript1281.chr11.nic@ARNTL transcript1281.chr11.nic protein_coding 13277745,13309987,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596 13277923,13310059,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13388048 Gene ID= ENSG00000133794.17 TPM= 33.12 Transcript Type= NA chr11 13277842 13387263 13277842 13387263 + ENST00000403510.7@ARNTL ENST00000403510.7 protein_coding 13277842,13309987,13349945,13354301,13355226,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372166,13374095,13375612,13376640,13378337,13381161,13385689,13386596 13277923,13310059,13350070,13354448,13355296,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387263 Gene ID= ENSG00000133794.17 TPM= 11.09 Transcript Type= protein_coding chr11 13277831 13387266 13277831 13387266 + ENST00000403290.5@ARNTL ENST00000403290.5 protein_coding 13277831,13309987,13326413,13349945,13354301,13356739,13357055,13358434,13360345,13365500,13366665,13369618,13372163,13374095,13375612,13376640,13378337,13381161,13385689,13386596 13277923,13310059,13326467,13350070,13354448,13356777,13357096,13358591,13360424,13365592,13366782,13369767,13372409,13374201,13375762,13376728,13378445,13381254,13385791,13387266 Gene ID= ENSG00000133794.17 TPM= 10.49 Transcript Type= protein_coding chr11 13388001 13463280 13388001 13463280 - ENST00000278174.9@BTBD10 ENST00000278174.9 protein_coding 13463092,13445024,13421642,13419460,13417158,13413530,13405659,13403168,13388001 13463280,13445181,13421838,13419745,13417260,13413650,13405856,13403278,13389141 Gene ID= ENSG00000148925.10 TPM= 14.49 Transcript Type= protein_coding chr11 13487347 13732338 13487347 13732338 + transcript1289.chr11.nnic@FAR1 transcript1289.chr11.nnic protein_coding 13487347,13630357,13667144,13694759,13700317,13707900,13710693,13711764,13711928,13712966,13714509,13721730,13727556,13728612 13487867,13630474,13667311,13694954,13700492,13708079,13710870,13711808,13712046,13713033,13714680,13721859,13727683,13732338 Gene ID= ENSG00000197601.12 TPM= 2.26 Transcript Type= NA chr11 13668670 13732346 13668670 13732346 + ENST00000354817.7@FAR1 ENST00000354817.7 protein_coding 13668670,13694759,13700317,13707900,13710693,13711764,13711928,13712966,13714509,13721730,13727556,13728612 13668806,13694954,13700492,13708079,13710870,13711808,13712046,13713033,13714680,13721859,13727683,13732346 Gene ID= ENSG00000197601.12 TPM= 25.81 Transcript Type= protein_coding chr11 13962689 14267884 13962689 14267884 + ENST00000576479.3@SPON1 ENST00000576479.3 protein_coding 13962689,13982847,14041521,14075345,14079899,14135420,14243332,14254528,14255647,14256617,14257716,14259280,14259534,14260588,14262712,14265524 13963142,13982953,14041654,14075418,14080021,14135568,14243396,14254729,14255787,14256692,14257898,14259450,14259701,14260752,14262975,14267884 Gene ID= ENSG00000262655.3 TPM= 23.54 Transcript Type= protein_coding chr11 14278750 14359184 14278750 14359184 - ENST00000256196.8@RRAS2 ENST00000256196.8 protein_coding 14358763,14295768,14294760,14294471,14281602,14278750 14359184,14295855,14294862,14294579,14281720,14279424 Gene ID= ENSG00000133818.13 TPM= 8.15 Transcript Type= protein_coding chr11 14457509 14499901 14457509 14499901 - transcript1300.chr11.nic@COPB1 transcript1300.chr11.nic protein_coding 14499603,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457509 14499901,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883 Gene ID= ENSG00000129083.12 TPM= 4.53 Transcript Type= NA chr11 14457507 14499865 14457507 14499865 - transcript1303.chr11.nic@COPB1 transcript1303.chr11.nic protein_coding 14499742,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457507 14499865,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883 Gene ID= ENSG00000129083.12 TPM= 45.28 Transcript Type= NA chr11 14457550 14499895 14457550 14499895 - ENST00000439561.6@COPB1 ENST00000439561.6 protein_coding 14499707,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457550 14499895,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883 Gene ID= ENSG00000129083.12 TPM= 43.47 Transcript Type= protein_coding chr11 14457506 14499852 14457506 14499852 - ENST00000249923.7@COPB1 ENST00000249923.7 protein_coding 14499609,14498838,14494210,14493642,14490565,14488492,14486367,14483032,14480990,14480759,14479569,14476919,14475785,14474495,14469336,14468681,14466282,14464911,14461186,14460208,14458532,14457506 14499852,14498985,14494439,14493811,14490679,14488584,14486504,14483151,14481097,14480905,14479714,14477015,14475945,14474615,14469563,14468860,14466426,14465030,14461331,14460297,14458687,14457883 Gene ID= ENSG00000129083.12 TPM= 18.11 Transcript Type= protein_coding chr11 14504875 14520390 14504875 14520390 - transcript1308.chr11.nic@PSMA1 transcript1308.chr11.nic protein_coding 14519873,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504875 14520390,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248 Gene ID= ENSG00000129084.17 TPM= 4.15 Transcript Type= NA chr11 14504876 14520696 14504876 14520696 - ENST00000396394.6@PSMA1 ENST00000396394.6 protein_coding 14520297,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504876 14520696,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248 Gene ID= ENSG00000129084.17 TPM= 118.25 Transcript Type= protein_coding chr11 14504875 14520405 14504875 14520405 - transcript1317.chr11.nic@PSMA1 transcript1317.chr11.nic protein_coding 14520297,14518997,14517880,14517642,14513817,14513570,14510872,14507656,14504875 14520405,14519041,14517981,14517745,14514491,14513699,14510951,14507766,14505248 Gene ID= ENSG00000129084.17 TPM= 5.66 Transcript Type= NA chr11 14504913 14520363 14504913 14520363 - ENST00000530457.5@PSMA1 ENST00000530457.5 protein_coding 14519905,14518997,14517880,14517642,14514403,14513817,14513570,14510872,14507656,14504913 14520363,14519041,14517981,14517745,14514491,14513887,14513699,14510951,14507766,14505248 Gene ID= ENSG00000129084.17 TPM= 3.62 Transcript Type= protein_coding chr11 14878009 14891640 14878009 14891640 - ENST00000530609.5@CYP2R1 ENST00000530609.5 protein_coding 14891153,14885776,14880136,14879114,14878009 14891640,14885917,14880768,14879443,14878297 Gene ID= ENSG00000186104.10 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr11 16738606 16755890 16738606 16755890 + transcript1332.chr11.nnic@C11orf58 transcript1332.chr11.nnic protein_coding 16738606,16744601,16748097,16754871 16738841,16744684,16748157,16755890 Gene ID= ENSG00000110696.9 TPM= 8.15 Transcript Type= NA chr11 17074389 17077787 17074389 17077787 - ENST00000525634.5@RPS13 ENST00000525634.5 protein_coding 17077619,17077429,17077168,17075454,17075097,17074389 17077787,17077477,17077246,17075623,17075197,17074466 Gene ID= ENSG00000110700.6 TPM= 575.47 Transcript Type= protein_coding chr11 17074389 17077666 17074389 17077666 - ENST00000228140.6@RPS13 ENST00000228140.6 protein_coding 17077619,17077429,17077168,17075454,17075097,17074389 17077666,17077477,17077246,17075623,17075163,17074466 Gene ID= ENSG00000110700.6 TPM= 6.34 Transcript Type= protein_coding chr11 17074389 17077706 17074389 17077706 - ENST00000526895.5@RPS13 ENST00000526895.5 protein_coding 17077619,17077429,17077168,17075454,17075097,17074389 17077706,17077473,17077246,17075623,17075197,17074466 Gene ID= ENSG00000110700.6 TPM= 5.43 Transcript Type= processed_transcript chr11 17074393 17077668 17074393 17077668 - ENST00000525828.1@RPS13 ENST00000525828.1 protein_coding 17077429,17077168,17075454,17075097,17074393 17077668,17077246,17075623,17075197,17074466 Gene ID= ENSG00000110700.6 TPM= 5.89 Transcript Type= retained_intron chr11 17086579 17207962 17086579 17207962 - transcript1336.chr11.nic@PIK3C2A transcript1336.chr11.nic protein_coding 17207848,17168677,17155526,17150498,17148667,17147517,17145863,17145668,17136482,17135111,17134819,17131916,17129300,17122702,17122188,17119786,17119220,17118645,17117491,17114361,17112574,17110432,17105169,17102662,17101278,17099860,17097057,17094261,17092159,17091996,17091547,17091334,17086579 17207962,17169806,17155629,17150655,17148787,17147628,17145942,17145731,17136625,17135159,17135029,17132038,17129467,17122813,17122333,17119974,17119313,17118739,17117671,17114465,17112666,17110561,17105305,17102831,17101434,17099969,17097264,17094385,17092276,17092068,17091656,17091459,17089920 Gene ID= ENSG00000011405.13 TPM= 9.96 Transcript Type= NA chr11 17148520 17207962 17148520 17207962 - transcript1340.chr11.nic@PIK3C2A transcript1340.chr11.nic protein_coding 17207848,17168677,17155526,17150498,17148520 17207962,17169806,17155629,17150655,17148787 Gene ID= ENSG00000011405.13 TPM= 1.81 Transcript Type= NA chr11 17276685 17349977 17276685 17349977 + transcript1344.chr11.nnic@NUCB2 transcript1344.chr11.nnic protein_coding 17276685,17282789,17295324,17296104,17301744,17309572,17310825,17311193,17311872,17312028,17315386,17330127,17330902,17349345 17276828,17282943,17295467,17296211,17301870,17309675,17311010,17311283,17311930,17312120,17315475,17330297,17330983,17349977 Gene ID= ENSG00000070081.15 TPM= 5.43 Transcript Type= NA chr11 17788051 18012947 17788051 18012947 - transcript1347.chr11.nic@SERGEF transcript1347.chr11.nic protein_coding 18012851,18007941,18006591,18004441,18000497,17999494,17995796,17992931,17988597,17959470,17878208,17788051 18012947,18008076,18006746,18004535,18000557,17999572,17995909,17992993,17988755,17959636,17878244,17788413 Gene ID= ENSG00000129158.10 TPM= 2.94 Transcript Type= NA chr11 17788051 18012938 17788051 18012938 - transcript1349.chr11.nic@SERGEF transcript1349.chr11.nic protein_coding 18012851,18010071,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788051 18012938,18010139,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413 Gene ID= ENSG00000129158.10 TPM= 2.04 Transcript Type= NA chr11 17788051 18012947 17788051 18012947 - transcript1352.chr11.nic@SERGEF transcript1352.chr11.nic protein_coding 18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788051 18012947,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413 Gene ID= ENSG00000129158.10 TPM= 4.75 Transcript Type= NA chr11 17788048 18013162 17788048 18013162 - ENST00000265965.9@SERGEF ENST00000265965.9 protein_coding 18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17959470,17878208,17788048 18013162,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17959636,17878244,17788413 Gene ID= ENSG00000129158.10 TPM= 14.72 Transcript Type= protein_coding chr11 17788051 18012947 17788051 18012947 - transcript1357.chr11.nic@SERGEF transcript1357.chr11.nic protein_coding 18012851,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788051 18012947,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413 Gene ID= ENSG00000129158.10 TPM= 1.81 Transcript Type= NA chr11 17788049 18013028 17788049 18013028 - ENST00000528200.5@SERGEF ENST00000528200.5 protein_coding 18012951,18007941,18006591,18004441,18000497,17995796,17992931,17988597,17878208,17788049 18013028,18008076,18006746,18004535,18000557,17995909,17992993,17988755,17878244,17788413 Gene ID= ENSG00000129158.10 TPM= 7.24 Transcript Type= protein_coding chr11 18080344 18106082 18080344 18106082 - ENST00000300013.8@SAAL1 ENST00000300013.8 protein_coding 18105907,18103233,18096771,18092245,18090434,18090175,18089330,18087143,18086866,18083535,18081411,18080344 18106082,18103346,18096854,18092324,18090493,18090290,18089510,18087225,18087054,18083728,18081503,18080491 Gene ID= ENSG00000166788.9 TPM= 11.77 Transcript Type= protein_coding chr11 18245228 18248643 18245228 18248643 - ENST00000256733.8@SAA2 ENST00000256733.8 protein_coding 18248603,18247921,18245910,18245228 18248643,18248015,18246048,18245515 Gene ID= ENSG00000134339.8 TPM= 1.81 Transcript Type= protein_coding chr11 18266174 18269974 18266174 18269974 + ENST00000356524.8@SAA1 ENST00000356524.8 protein_coding 18266174,18266884,18269195,18269717 18266296,18266978,18269333,18269974 Gene ID= ENSG00000173432.10 TPM= 16.3 Transcript Type= protein_coding chr11 18278755 18322189 18278755 18322189 - transcript1370.chr11.nnic@HPS5 transcript1370.chr11.nnic protein_coding 18322077,18317751,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278755 18322189,18317907,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942 Gene ID= ENSG00000110756.17 TPM= 1.81 Transcript Type= NA chr11 18278678 18322515 18278678 18322515 - transcript1371.chr11.nic@HPS5 transcript1371.chr11.nic protein_coding 18322133,18317751,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278678 18322515,18317907,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942 Gene ID= ENSG00000110756.17 TPM= 8.15 Transcript Type= NA chr11 18278678 18322181 18278678 18322181 - transcript1374.chr11.nic@HPS5 transcript1374.chr11.nic protein_coding 18322077,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278678 18322181,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942 Gene ID= ENSG00000110756.17 TPM= 1.81 Transcript Type= NA chr11 18281274 18322530 18281274 18322530 - transcript1378.chr11.nic@HPS5 transcript1378.chr11.nic protein_coding 18322133,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281274 18322530,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220 Gene ID= ENSG00000110756.17 TPM= 3.62 Transcript Type= NA chr11 18278668 18322174 18278668 18322174 - ENST00000396253.7@HPS5 ENST00000396253.7 protein_coding 18321946,18311914,18311387,18310741,18308946,18306135,18305422,18300828,18298792,18297559,18296798,18295999,18295020,18292899,18291442,18287893,18287535,18286591,18285346,18283795,18281950,18278668 18322174,18312024,18311451,18310933,18309079,18306347,18305493,18300916,18298970,18297717,18296984,18296122,18295169,18292976,18292019,18288013,18287690,18286710,18285459,18283901,18282220,18279942 Gene ID= ENSG00000110756.17 TPM= 4.53 Transcript Type= protein_coding chr11 18322251 18366812 18322251 18366812 + transcript1385.chr11.nnic@GTF2H1 transcript1385.chr11.nnic protein_coding 18322251,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832,18352329,18357952,18358525,18360615,18365783 18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18347919,18352446,18358042,18358640,18360707,18366812 Gene ID= ENSG00000110768.11 TPM= 2.26 Transcript Type= NA chr11 18322553 18348836 18322553 18348836 + transcript1387.chr11.nic@GTF2H1 transcript1387.chr11.nic protein_coding 18322553,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832 18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18348836 Gene ID= ENSG00000110768.11 TPM= 4.53 Transcript Type= NA chr11 18322596 18367044 18322596 18367044 + ENST00000265963.8@GTF2H1 ENST00000265963.8 protein_coding 18322596,18333060,18335754,18338109,18339564,18341261,18341528,18347588,18347832,18351881,18352329,18357952,18358525,18360615,18365783 18322740,18333228,18335946,18338274,18339657,18341410,18341607,18347715,18347919,18351969,18352446,18358042,18358640,18360707,18367044 Gene ID= ENSG00000110768.11 TPM= 24.9 Transcript Type= protein_coding chr11 18394388 18408425 18394388 18408425 + ENST00000422447.7@LDHA ENST00000422447.7 protein_coding 18394388,18396819,18399431,18400837,18402840,18403694,18405449,18407117 18394636,18396968,18399548,18401010,18403013,18403811,18405572,18408425 Gene ID= ENSG00000134333.13 TPM= 1262.33 Transcript Type= protein_coding chr11 18480311 18527232 18480311 18527232 - ENST00000251968.3@TSG101 ENST00000251968.3 protein_coding 18526775,18519519,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480311 18527232,18519603,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635 Gene ID= ENSG00000074319.12 TPM= 107.31 Transcript Type= protein_coding chr11 18480309 18526943 18480309 18526943 - transcript1403.chr11.nic@TSG101 transcript1403.chr11.nic protein_coding 18526775,18516099,18514678,18509542,18506857,18502486,18483870,18481630,18480309 18526943,18516164,18514841,18509665,18506923,18502577,18484072,18481869,18480635 Gene ID= ENSG00000074319.12 TPM= 4.98 Transcript Type= NA chr11 18529610 18588734 18529610 18588734 - transcript1404.chr11.nnic@UEVLD transcript1404.chr11.nnic protein_coding 18588613,18578724,18575347,18570214,18566347,18564892,18562901,18558228,18546880,18544623,18536406,18534330,18529610 18588734,18578808,18575412,18570377,18566482,18565010,18563037,18558330,18547024,18544796,18536469,18534453,18532487 Gene ID= ENSG00000151116.16 TPM= 1.81 Transcript Type= NA chr11 18529609 18588683 18529609 18588683 - ENST00000396197.7@UEVLD ENST00000396197.7 protein_coding 18588613,18578724,18575347,18570214,18566347,18564892,18558228,18546880,18544623,18536406,18534330,18529609 18588683,18578808,18575412,18570377,18566482,18565010,18558330,18547050,18544796,18536469,18534453,18532487 Gene ID= ENSG00000151116.16 TPM= 9.06 Transcript Type= protein_coding chr11 18588801 18603882 18588801 18603882 + transcript1411.chr11.nnic@SPTY2D1-AS1 transcript1411.chr11.nnic protein_coding 18588801,18603158,18603772 18588995,18603195,18603882 Gene ID= ENSG00000247595.4 TPM= 2.72 Transcript Type= NA chr11 18606401 18634493 18606401 18634493 - ENST00000336349.5@SPTY2D1 ENST00000336349.5 protein_coding 18634198,18616875,18614563,18612314,18611477,18606401 18634493,18616989,18616098,18612488,18611554,18609954 Gene ID= ENSG00000179119.14 TPM= 14.49 Transcript Type= protein_coding chr11 18698791 18704785 18698791 18704785 + ENST00000280734.2@TMEM86A ENST00000280734.2 protein_coding 18698791,18700933,18701573 18698907,18701197,18704785 Gene ID= ENSG00000151117.8 TPM= 14.49 Transcript Type= protein_coding chr11 19117129 19176415 19117129 19176415 + ENST00000446113.6@ZDHHC13 ENST00000446113.6 protein_coding 19117129,19142978,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822 19117276,19143123,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415 Gene ID= ENSG00000177054.13 TPM= 16.3 Transcript Type= protein_coding chr11 19117145 19176415 19117145 19176415 + ENST00000399351.7@ZDHHC13 ENST00000399351.7 protein_coding 19117145,19146181,19147596,19149187,19150727,19152158,19152559,19155796,19158940,19163303,19164301,19165052,19166302,19170411,19172723,19175822 19117276,19146303,19147673,19149331,19150791,19152320,19152684,19155929,19159040,19163427,19164363,19165145,19166385,19170568,19172820,19176415 Gene ID= ENSG00000177054.13 TPM= 1.81 Transcript Type= protein_coding chr11 20363749 20383949 20363749 20383949 + transcript1424.chr11.nnic@HTATIP2 transcript1424.chr11.nnic protein_coding 20363749,20364154,20367174,20376580,20382178,20382980 20363912,20364432,20367281,20376717,20382239,20383949 Gene ID= ENSG00000109854.13 TPM= 3.92 Transcript Type= NA chr11 20363704 20367652 20363704 20367652 + transcript1429.chr11.nnic@HTATIP2 transcript1429.chr11.nnic protein_coding 20363704,20364154,20367174 20363749,20364432,20367652 Gene ID= ENSG00000109854.13 TPM= 2.72 Transcript Type= NA chr11 20363685 20367625 20363685 20367625 + ENST00000530266.5@HTATIP2 ENST00000530266.5 protein_coding 20363685,20364237,20367174 20363749,20364432,20367625 Gene ID= ENSG00000109854.13 TPM= 4.53 Transcript Type= protein_coding chr11 20363743 20383782 20363743 20383782 + ENST00000419348.6@HTATIP2 ENST00000419348.6 protein_coding 20363743,20364237,20367174,20376580,20382178,20382980 20363912,20364432,20367281,20376717,20382239,20383782 Gene ID= ENSG00000109854.13 TPM= 43.77 Transcript Type= protein_coding chr11 20363797 20383783 20363797 20383783 + ENST00000451739.6@HTATIP2 ENST00000451739.6 protein_coding 20363797,20367174,20376580,20382178,20382980 20364432,20367281,20376717,20382239,20383783 Gene ID= ENSG00000109854.13 TPM= 18.41 Transcript Type= protein_coding chr11 20387530 20509253 20387530 20509253 + ENST00000331079.10@PRMT3 ENST00000331079.10 protein_coding 20387530,20388019,20389744,20392211,20392897,20395803,20397577,20402919,20407911,20426766,20452130,20461980,20464460,20493919,20494167,20508304 20387774,20388154,20389826,20392260,20392999,20395962,20397721,20402984,20408032,20426865,20452208,20462167,20464546,20493969,20494254,20509253 Gene ID= ENSG00000185238.12 TPM= 18.11 Transcript Type= protein_coding chr11 22192606 22283160 22192606 22283160 + transcript1438.chr11.nnic@ANO5 transcript1438.chr11.nnic protein_coding 22192606,22203804,22211264,22221097,22225984,22227302,22236163,22239569,22250237,22250741,22250951,22255371,22257680,22259519,22262129,22262946,22270312,22272784,22274569,22276094,22279544 22193532,22203850,22211314,22221210,22226052,22227586,22236276,22239684,22250371,22250846,22251011,22255522,22257754,22259741,22262298,22263043,22270442,22272989,22274747,22276199,22283160 Gene ID= ENSG00000171714.10 TPM= 9.06 Transcript Type= NA chr11 22818929 22829865 22818929 22829865 - ENST00000354193.4@SVIP ENST00000354193.4 protein_coding 22829695,22827824,22827207,22818929 22829865,22827874,22827320,22823133 Gene ID= ENSG00000198168.8 TPM= 47.99 Transcript Type= protein_coding chr11 24867168 25082636 24867168 25082636 + transcript1446.chr11.nnic@LUZP2 transcript1446.chr11.nnic protein_coding 24867168,24905991,24914476,24976591,24983126,25050038,25077329,25078554 24867221,24906053,24914538,24976665,24983293,25050130,25077406,25082636 Gene ID= ENSG00000187398.11 TPM= 3.62 Transcript Type= NA chr11 24496970 24893337 24496970 24893337 + ENST00000531187.5@LUZP2 ENST00000531187.5 protein_coding 24496970,24729169,24732118,24738221,24763246,24890919 24497305,24729286,24732188,24738302,24763308,24893337 Gene ID= ENSG00000187398.11 TPM= 5.43 Transcript Type= processed_transcript chr11 24729167 24894152 24729167 24894152 + transcript1449.chr11.nnic@LUZP2 transcript1449.chr11.nnic protein_coding 24729167,24732118,24738221,24763246,24891754 24729286,24732188,24738302,24763308,24894152 Gene ID= ENSG00000187398.11 TPM= 1.81 Transcript Type= NA chr11 24729140 25082631 24729140 25082631 + ENST00000620308.1@LUZP2 ENST00000620308.1 protein_coding 24729140,24732118,24738221,24763246,24905991,24914476,24976591,24983126,25050038,25077329,25078554 24729286,24732188,24738302,24763308,24906053,24914538,24976665,24983293,25050130,25077406,25082631 Gene ID= ENSG00000187398.11 TPM= 3.62 Transcript Type= protein_coding chr11 27365959 27472774 27365959 27472774 - transcript1453.chr11.nnic@LGR4 transcript1453.chr11.nnic protein_coding 27472118,27412789,27392447,27391147,27385253,27384336,27382188,27380895,27380640,27380271,27378697,27377158,27376299,27373975,27373551,27372283,27371615,27365959 27472774,27412860,27392518,27391165,27385426,27384407,27382256,27380966,27380711,27380339,27378768,27377223,27376370,27374046,27373676,27372398,27371698,27369143 Gene ID= ENSG00000205213.13 TPM= 2.72 Transcript Type= NA chr11 27365961 27472775 27365961 27472775 - ENST00000389858.4@LGR4 ENST00000389858.4 protein_coding 27472118,27392447,27391094,27385253,27384336,27382188,27380895,27380640,27380271,27378697,27377158,27376299,27373975,27373551,27372283,27371615,27365961 27472775,27392518,27391165,27385468,27384407,27382256,27380966,27380711,27380339,27378768,27377223,27376370,27374046,27373676,27372398,27371698,27369143 Gene ID= ENSG00000205213.13 TPM= 2.26 Transcript Type= protein_coding chr11 27365961 27472746 27365961 27472746 - ENST00000379214.8@LGR4 ENST00000379214.8 protein_coding 27472118,27412789,27392447,27391094,27385253,27384336,27382188,27380895,27380640,27380271,27378697,27377158,27376299,27373975,27373551,27372283,27371615,27365961 27472746,27412860,27392518,27391165,27385468,27384407,27382256,27380966,27380711,27380339,27378768,27377223,27376370,27374046,27373676,27372398,27371698,27369143 Gene ID= ENSG00000205213.13 TPM= 43.01 Transcript Type= protein_coding chr11 27494576 27506773 27494576 27506773 - ENST00000278193.6@LIN7C ENST00000278193.6 protein_coding 27506716,27501802,27501495,27499359,27494576 27506773,27501920,27501566,27499568,27498804 Gene ID= ENSG00000148943.11 TPM= 71.54 Transcript Type= protein_coding chr11 28020620 28108308 28020620 28108308 - ENST00000263181.6@KIF18A ENST00000263181.6 protein_coding 28108064,28097623,28094643,28091409,28090617,28088524,28084632,28083169,28082856,28077007,28069259,28062395,28058926,28036217,28035387,28023741,28020620 28108308,28097993,28094800,28091513,28090727,28088721,28084808,28083243,28082968,28077169,28069423,28062516,28059161,28036664,28035494,28023850,28021282 Gene ID= ENSG00000121621.6 TPM= 1.81 Transcript Type= protein_coding chr11 28108354 28333507 28108354 28333507 + ENST00000407364.7@METTL15 ENST00000407364.7 protein_coding 28108354,28110166,28113318,28211062,28290206,28296753,28330396 28108452,28110401,28113604,28211198,28290397,28296931,28333507 Gene ID= ENSG00000169519.20 TPM= 18.41 Transcript Type= protein_coding chr11 28108248 28333507 28108248 28333507 + ENST00000406787.7@METTL15 ENST00000406787.7 protein_coding 28108248,28110166,28113318,28211062,28290206,28296797,28330396 28108452,28110401,28113604,28211198,28290397,28296931,28333507 Gene ID= ENSG00000169519.20 TPM= 6.64 Transcript Type= protein_coding chr11 28110312 28333507 28110312 28333507 + ENST00000303459.10@METTL15 ENST00000303459.10 protein_coding 28110312,28113318,28211062,28290206,28296753,28328095,28330396 28110401,28113604,28211198,28290397,28296931,28328165,28333507 Gene ID= ENSG00000169519.20 TPM= 1.2 Transcript Type= protein_coding chr11 30009741 30017023 30009741 30017023 - ENST00000328224.6@KCNA4 ENST00000328224.6 protein_coding 30016572,30009741 30017023,30013460 Gene ID= ENSG00000182255.6 TPM= 21.73 Transcript Type= protein_coding chr11 30323106 30338453 30323106 30338453 + transcript1472.chr11.nic@ARL14EP transcript1472.chr11.nic protein_coding 30323106,30330886,30332866,30336567 30323202,30331800,30332993,30338453 Gene ID= ENSG00000152219.4 TPM= 3.62 Transcript Type= NA chr11 30323051 30338227 30323051 30338227 + ENST00000282032.3@ARL14EP ENST00000282032.3 protein_coding 30323051,30330886,30332866,30336567 30323202,30331374,30332993,30338227 Gene ID= ENSG00000152219.4 TPM= 51.62 Transcript Type= protein_coding chr11 30410227 30586412 30410227 30586412 - transcript1475.chr11.nic@MPPED2 transcript1475.chr11.nic protein_coding 30586042,30580246,30535994,30495296,30417518,30414228,30410227 30586412,30580494,30536175,30495521,30417633,30414341,30411586 Gene ID= ENSG00000066382.16 TPM= 1.81 Transcript Type= NA chr11 31369844 31427958 31369844 31427958 + transcript1479.chr11.nic@DNAJC24 transcript1479.chr11.nic protein_coding 31369844,31370716,31414811,31426287 31369912,31370859,31414949,31427958 Gene ID= ENSG00000170946.14 TPM= 1.81 Transcript Type= NA chr11 31432396 31509613 31432396 31509613 - transcript1483.chr11.nic@IMMP1L transcript1483.chr11.nic protein_coding 31509519,31456260,31433460,31432396 31509613,31456386,31433570,31432568 Gene ID= ENSG00000148950.9 TPM= 2.11 Transcript Type= NA chr11 31432401 31509574 31432401 31509574 - ENST00000526776.5@IMMP1L ENST00000526776.5 protein_coding 31509519,31463172,31433460,31432401 31509574,31463305,31433570,31432568 Gene ID= ENSG00000148950.9 TPM= 3.02 Transcript Type= protein_coding chr11 31432401 31509574 31432401 31509574 - ENST00000532287.5@IMMP1L ENST00000532287.5 protein_coding 31509519,31463172,31460626,31456260,31433460,31432401 31509574,31463305,31460714,31456386,31433570,31432568 Gene ID= ENSG00000148950.9 TPM= 2.11 Transcript Type= protein_coding chr11 31509700 31790328 31509700 31790328 + ENST00000640961.1@ELP4 ENST00000640961.1 protein_coding 31509700,31520056,31539662,31594770,31603768,31627110,31632217,31647741,31650115,31783393 31510007,31520091,31539783,31594901,31603907,31627194,31632405,31647849,31650221,31790328 Gene ID= ENSG00000109911.18 TPM= 15.39 Transcript Type= protein_coding chr11 32090904 32105755 32090904 32105755 + ENST00000054950.3@RCN1 ENST00000054950.3 protein_coding 32090904,32097144,32098350,32100548,32103281,32104365 32091450,32097337,32098528,32100608,32103480,32105755 Gene ID= ENSG00000049449.8 TPM= 206.46 Transcript Type= protein_coding chr11 32583822 32602466 32583822 32602466 + transcript1496.chr11.nic@EIF3M transcript1496.chr11.nic protein_coding 32583822,32587012,32588594,32589012,32589547,32593866,32595966,32600689,32601762,32602279 32583929,32587144,32588732,32589135,32589641,32595013,32596047,32600832,32601822,32602466 Gene ID= ENSG00000149100.12 TPM= 5.43 Transcript Type= NA chr11 33039417 33073563 33039417 33073563 + ENST00000334274.8@TCP11L1 ENST00000334274.8 protein_coding 33039417,33043750,33054593,33057115,33057919,33058959,33061530,33065830,33068687,33072474 33039792,33043936,33054725,33057235,33058139,33059095,33061726,33066011,33068859,33073563 Gene ID= ENSG00000176148.15 TPM= 6.64 Transcript Type= protein_coding chr11 33039786 33073566 33039786 33073566 + transcript1504.chr11.nic@TCP11L1 transcript1504.chr11.nic protein_coding 33039786,33043750,33054593,33057115,33057919,33058959,33061530,33065830,33068687,33072474 33040387,33043936,33054725,33057235,33058139,33059095,33061726,33066011,33068859,33073566 Gene ID= ENSG00000176148.15 TPM= 2.11 Transcript Type= NA chr11 33040015 33073563 33040015 33073563 + ENST00000432887.5@TCP11L1 ENST00000432887.5 protein_coding 33040015,33043750,33054593,33057115,33057919,33058959,33061530,33065830,33068687,33072474 33040206,33043936,33054725,33057235,33058139,33059095,33061726,33066011,33068859,33073563 Gene ID= ENSG00000176148.15 TPM= 1.2 Transcript Type= protein_coding chr11 33140966 33161531 33140966 33161531 - ENST00000438862.6@CSTF3 ENST00000438862.6 protein_coding 33161299,33141885,33140966 33161531,33141986,33141762 Gene ID= ENSG00000176102.11 TPM= 9.06 Transcript Type= protein_coding chr11 33084584 33161465 33084584 33161465 - ENST00000323959.8@CSTF3 ENST00000323959.8 protein_coding 33161299,33141885,33141667,33108386,33107903,33105998,33105883,33105567,33103107,33102177,33099608,33099034,33098690,33096835,33096306,33092271,33090532,33086988,33085895,33085713,33084584 33161465,33141986,33141762,33108418,33108000,33106064,33105917,33105693,33103184,33102339,33099717,33099150,33098764,33096978,33096408,33092340,33090727,33087141,33085989,33085773,33085289 Gene ID= ENSG00000176102.11 TPM= 9.96 Transcript Type= protein_coding chr11 33708700 33736439 33708700 33736439 - ENST00000395850.7@CD59 ENST00000395850.7 protein_coding 33736382,33722379,33717370,33708700 33736439,33722463,33717471,33710343 Gene ID= ENSG00000085063.14 TPM= 218.24 Transcript Type= protein_coding chr11 33708865 33736445 33708865 33736445 - ENST00000351554.7@CD59 ENST00000351554.7 protein_coding 33736382,33731424,33722379,33717370,33708865 33736445,33731468,33722463,33717471,33710343 Gene ID= ENSG00000085063.14 TPM= 60.67 Transcript Type= protein_coding chr11 33744021 33774530 33744021 33774530 - transcript1523.chr11.nic@FBXO3 transcript1523.chr11.nic protein_coding 33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33744021 33774530,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33746059 Gene ID= ENSG00000110429.13 TPM= 10.26 Transcript Type= NA chr11 33740946 33774516 33740946 33774516 - ENST00000265651.7@FBXO3 ENST00000265651.7 protein_coding 33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33747130,33740946 33774516,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320,33742084 Gene ID= ENSG00000110429.13 TPM= 57.35 Transcript Type= protein_coding chr11 33746743 33774543 33746743 33774543 - ENST00000448981.6@FBXO3 ENST00000448981.6 protein_coding 33774394,33770741,33768851,33758487,33755771,33754455,33751523,33750539,33748777,33746743 33774543,33770830,33769014,33758601,33755975,33754500,33751607,33750661,33748892,33747320 Gene ID= ENSG00000110429.13 TPM= 4.83 Transcript Type= protein_coding chr11 33858576 33892289 33858576 33892289 - ENST00000257818.2@LMO2 ENST00000257818.2 protein_coding 33891795,33881824,33869710,33869346,33864602,33858576 33892289,33881887,33869987,33869586,33864817,33859575 Gene ID= ENSG00000135363.11 TPM= 5.13 Transcript Type= protein_coding chr11 33858578 33869967 33858578 33869967 - transcript1528.chr11.nic@LMO2 transcript1528.chr11.nic protein_coding 33869825,33869346,33864602,33858578 33869967,33869586,33864817,33859575 Gene ID= ENSG00000135363.11 TPM= 11.47 Transcript Type= NA chr11 33858576 33869816 33858576 33869816 - ENST00000395833.7@LMO2 ENST00000395833.7 protein_coding 33869346,33864602,33858576 33869816,33864817,33859575 Gene ID= ENSG00000135363.11 TPM= 14.19 Transcript Type= protein_coding chr11 34051683 34101156 34051683 34101156 + ENST00000341394.8@CAPRIN1 ENST00000341394.8 protein_coding 34051683,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698,34099303 34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34097761,34101156 Gene ID= ENSG00000135387.20 TPM= 71.99 Transcript Type= protein_coding chr11 34051732 34099054 34051732 34099054 + ENST00000389645.7@CAPRIN1 ENST00000389645.7 protein_coding 34051732,34052421,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698 34051871,34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34099054 Gene ID= ENSG00000135387.20 TPM= 9.06 Transcript Type= protein_coding chr11 34052210 34100464 34052210 34100464 + ENST00000532820.5@CAPRIN1 ENST00000532820.5 protein_coding 34052210,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698,34099303 34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34097761,34100464 Gene ID= ENSG00000135387.20 TPM= 10.41 Transcript Type= protein_coding chr11 34052329 34099058 34052329 34099058 + ENST00000530820.5@CAPRIN1 ENST00000530820.5 protein_coding 34052329,34071726,34071901,34076236,34076560,34079628,34082825,34082955,34086064,34086305,34089395,34090179,34090529,34091906,34096479,34097196,34097698 34052636,34071788,34071987,34076474,34076642,34079765,34082877,34083041,34086219,34086413,34089456,34090289,34090678,34092056,34096673,34097296,34099058 Gene ID= ENSG00000135387.20 TPM= 2.72 Transcript Type= protein_coding chr11 34105602 34146910 34105602 34146910 + ENST00000257829.7@NAT10 ENST00000257829.7 protein_coding 34105602,34108211,34108742,34112052,34113716,34115823,34118180,34118396,34122459,34123762,34124302,34127463,34130813,34131381,34132125,34133026,34134319,34134512,34135175,34136642,34136978,34139191,34139385,34140400,34141089,34141719,34142275,34143445,34146084 34105792,34108333,34108833,34112223,34113838,34115884,34118294,34118503,34122592,34123855,34124400,34127599,34130937,34131531,34132221,34133142,34134420,34134586,34135291,34136775,34137026,34139287,34139495,34140572,34141208,34141817,34142348,34143528,34146910 Gene ID= ENSG00000135372.8 TPM= 61.58 Transcript Type= protein_coding chr11 34150988 34358008 34150988 34358008 - ENST00000435224.2@ABTB2 ENST00000435224.2 protein_coding 34356701,34204544,34197325,34173155,34170906,34167903,34167259,34165260,34164686,34162576,34160903,34160248,34159906,34159296,34154701,34154265,34150988 34358008,34204690,34197538,34173307,34171071,34167992,34167360,34165356,34164821,34162805,34161081,34160353,34160008,34159386,34154769,34154378,34152584 Gene ID= ENSG00000166016.5 TPM= 5.43 Transcript Type= protein_coding chr11 34438925 34472062 34438925 34472062 + ENST00000241052.4@CAT ENST00000241052.4 protein_coding 34438925,34449192,34450988,34452077,34453090,34453801,34456011,34456665,34461251,34464105,34468288,34470958,34471368 34439079,34449363,34451098,34452207,34453194,34453926,34456202,34456817,34461389,34464235,34468395,34471041,34472062 Gene ID= ENSG00000121691.4 TPM= 246.76 Transcript Type= protein_coding chr11 34882368 34916375 34882368 34916375 - transcript1561.chr11.nnic@APIP transcript1561.chr11.nnic protein_coding 34916228,34896761,34895010,34890504,34888752,34888293,34883337,34882368 34916375,34896855,34895110,34890552,34888869,34888428,34883504,34882816 Gene ID= ENSG00000149089.12 TPM= 5.13 Transcript Type= NA chr11 34882295 34916499 34882295 34916499 - ENST00000395787.3@APIP ENST00000395787.3 protein_coding 34916228,34895010,34890504,34888752,34888293,34883337,34882295 34916499,34895110,34890552,34888869,34888428,34883504,34882816 Gene ID= ENSG00000149089.12 TPM= 46.79 Transcript Type= protein_coding chr11 34882370 34916351 34882370 34916351 - ENST00000527830.1@APIP ENST00000527830.1 protein_coding 34916228,34890504,34888752,34888293,34883337,34882370 34916351,34890552,34888869,34888428,34883504,34882816 Gene ID= ENSG00000149089.12 TPM= 9.66 Transcript Type= processed_transcript chr11 34916130 34996122 34916130 34996122 + ENST00000448838.7@PDHX ENST00000448838.7 protein_coding 34916130,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914 34916486,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34996122 Gene ID= ENSG00000110435.11 TPM= 2.72 Transcript Type= protein_coding chr11 34916572 34995971 34916572 34995971 + ENST00000227868.8@PDHX ENST00000227868.8 protein_coding 34916572,34931404,34947506,34957384,34960420,34966640,34970139,34978124,34984570,34992315,34994914 34916815,34931484,34947606,34957583,34960518,34966814,34970286,34978182,34984728,34992379,34995971 Gene ID= ENSG00000110435.11 TPM= 73.35 Transcript Type= protein_coding chr11 35138870 35232402 35138870 35232402 + ENST00000263398.10@CD44 ENST00000263398.10 protein_coding 35138870,35176575,35180274,35186832,35189835,35214852,35219316,35221654,35229129 35139370,35176740,35180407,35186900,35190065,35214914,35219387,35221732,35232402 Gene ID= ENSG00000026508.17 TPM= 57.05 Transcript Type= protein_coding chr11 35431823 35526031 35431823 35526031 - ENST00000619888.4@PAMR1 ENST00000619888.4 protein_coding 35525513,35494096,35492045,35474630,35470601,35468001,35441481,35439627,35435903,35434512,35431823 35526031,35494272,35492173,35474744,35470818,35468108,35441693,35439693,35436135,35434804,35432892 Gene ID= ENSG00000149090.11 TPM= 15.39 Transcript Type= protein_coding chr11 35431823 35525623 35431823 35525623 - ENST00000622144.4@PAMR1 ENST00000622144.4 protein_coding 35525513,35494096,35492045,35474630,35470601,35468001,35451888,35441481,35439627,35435903,35434512,35431823 35525623,35494272,35492173,35474744,35470818,35468108,35451938,35441693,35439693,35436135,35434804,35432892 Gene ID= ENSG00000149090.11 TPM= 6.34 Transcript Type= protein_coding chr11 35944056 36232145 35944056 36232145 + transcript1574.chr11.nnic@LDLRAD3 transcript1574.chr11.nnic protein_coding 35944056,36022494,36036103,36081653,36098327,36227085,36229160 35944144,36022618,36036249,36081778,36098461,36227430,36232145 Gene ID= ENSG00000179241.12 TPM= 1.81 Transcript Type= NA chr11 35944037 36232136 35944037 36232136 + transcript1577.chr11.nic@LDLRAD3 transcript1577.chr11.nic protein_coding 35944037,36036103,36081653,36098327,36229160 35944144,36036249,36081778,36098461,36232136 Gene ID= ENSG00000179241.12 TPM= 1.81 Transcript Type= NA chr11 35944078 36232136 35944078 36232136 + ENST00000315571.5@LDLRAD3 ENST00000315571.5 protein_coding 35944078,36036103,36081653,36098327,36227085,36229160 35944144,36036249,36081778,36098461,36227430,36232136 Gene ID= ENSG00000179241.12 TPM= 13.58 Transcript Type= protein_coding chr11 36594493 36659290 36594493 36659290 + ENST00000446510.6@C11orf74 ENST00000446510.6 protein_coding 36594493,36610081,36633284,36636051,36648016,36659019 36594761,36610239,36633438,36636117,36648155,36659290 Gene ID= ENSG00000166352.15 TPM= 1.81 Transcript Type= protein_coding chr11 36594513 36659272 36594513 36659272 + ENST00000347206.8@C11orf74 ENST00000347206.8 protein_coding 36594513,36610081,36648016,36659019 36594592,36610239,36648155,36659272 Gene ID= ENSG00000166352.15 TPM= 3.62 Transcript Type= protein_coding chr11 36594501 36659268 36594501 36659268 + ENST00000334307.9@C11orf74 ENST00000334307.9 protein_coding 36594501,36610081,36633284,36636051,36648016,36659019 36594592,36610239,36633438,36636117,36648155,36659268 Gene ID= ENSG00000166352.15 TPM= 5.43 Transcript Type= protein_coding chr11 40114293 41459585 40114293 41459585 - ENST00000528697.5@LRRC4C ENST00000528697.5 protein_coding 41459431,40933635,40648142,40319628,40241519,40140801,40114293 41459585,40933723,40648278,40319721,40241598,40140853,40116334 Gene ID= ENSG00000148948.7 TPM= 1.36 Transcript Type= protein_coding chr11 40114205 40319730 40114205 40319730 - ENST00000619527.4@LRRC4C ENST00000619527.4 protein_coding 40319628,40140801,40114205 40319730,40140853,40116334 Gene ID= ENSG00000148948.7 TPM= 1.36 Transcript Type= protein_coding chr11 43312003 43344529 43312003 43344529 + ENST00000378852.7@API5 ENST00000378852.7 protein_coding 43312003,43318640,43320821,43321411,43321985,43323430,43326507,43327789,43328712,43329965,43330508,43335278,43335858,43342433 43312196,43318801,43320914,43321476,43322136,43323636,43326611,43327878,43328893,43330058,43330564,43335354,43335994,43344529 Gene ID= ENSG00000166181.12 TPM= 115.91 Transcript Type= protein_coding chr11 43358930 43494927 43358930 43494927 + transcript1612.chr11.nic@TTC17 transcript1612.chr11.nic protein_coding 43358930,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773 43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43494927 Gene ID= ENSG00000052841.14 TPM= 84.06 Transcript Type= NA chr11 43358930 43446720 43358930 43446720 + transcript1623.chr11.nnic@TTC17 transcript1623.chr11.nnic protein_coding 43358930,43379233,43389652,43391465,43391821,43396709,43397347,43398025,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43445931 43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43446720 Gene ID= ENSG00000052841.14 TPM= 4.53 Transcript Type= NA chr11 43358930 43402048 43358930 43402048 + transcript1628.chr11.nic@TTC17 transcript1628.chr11.nic protein_coding 43358930,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446 43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43402048 Gene ID= ENSG00000052841.14 TPM= 7.24 Transcript Type= NA chr11 43358932 43446719 43358932 43446719 + ENST00000299240.10@TTC17 ENST00000299240.10 protein_coding 43358932,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43436164,43443325,43444056,43445931 43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43436334,43443584,43444209,43446719 Gene ID= ENSG00000052841.14 TPM= 54.63 Transcript Type= protein_coding chr11 43358941 43494933 43358941 43494933 + ENST00000039989.8@TTC17 ENST00000039989.8 protein_coding 43358941,43379233,43389652,43391465,43391821,43396709,43397347,43397974,43399888,43401446,43403998,43405514,43405786,43407138,43407353,43414590,43443325,43444056,43448002,43450082,43451182,43490239,43492020,43493773 43359113,43379322,43389821,43391576,43391952,43396818,43397491,43398113,43400048,43401558,43404144,43405629,43405951,43407215,43407577,43414776,43443584,43444209,43448122,43450241,43451265,43490358,43492163,43494933 Gene ID= ENSG00000052841.14 TPM= 1.2 Transcript Type= protein_coding chr11 43680558 43856610 43680558 43856610 + ENST00000278353.9@HSD17B12 ENST00000278353.9 protein_coding 43680558,43750911,43754046,43798320,43815437,43816347,43830976,43838317,43839999,43854715,43855144 43680987,43750957,43754121,43798427,43815501,43816391,43831010,43838398,43840064,43854864,43856610 Gene ID= ENSG00000149084.12 TPM= 259.89 Transcript Type= protein_coding chr11 43880826 43921509 43880826 43921509 + transcript1637.chr11.nic@ALKBH3 transcript1637.chr11.nic protein_coding 43880826,43882583,43883085,43883983,43886606,43889725,43901516,43919038,43919918 43881179,43882731,43883188,43884017,43886653,43889828,43901725,43919136,43921509 Gene ID= ENSG00000166199.12 TPM= 2.72 Transcript Type= NA chr11 43880826 43920370 43880826 43920370 + transcript1638.chr11.nic@ALKBH3 transcript1638.chr11.nic protein_coding 43880826,43882583,43883085,43883983,43886606,43889725,43919038,43919918 43881179,43882731,43883188,43884017,43886653,43889828,43919136,43920370 Gene ID= ENSG00000166199.12 TPM= 1.81 Transcript Type= NA chr11 44066271 44084019 44066271 44084019 + transcript1655.chr11.nic@ACCS transcript1655.chr11.nic protein_coding 44066271,44067628,44071256,44073447,44074612,44075526,44077323,44077845,44079531,44081020,44081179,44083169,44083424,44083695 44066701,44067915,44071315,44073517,44074681,44075592,44077376,44078784,44079620,44081065,44081320,44083311,44083577,44084019 Gene ID= ENSG00000110455.13 TPM= 4.23 Transcript Type= NA chr11 44066328 44084019 44066328 44084019 + transcript1662.chr11.nic@ACCS transcript1662.chr11.nic protein_coding 44066328,44067628,44071256,44073447,44074612,44075526,44077279,44079531,44081020,44081179,44083169,44083424,44083695 44066701,44067915,44071315,44073517,44074681,44075592,44078784,44079620,44081065,44081320,44083311,44083577,44084019 Gene ID= ENSG00000110455.13 TPM= 4.98 Transcript Type= NA chr11 44066327 44084019 44066327 44084019 + transcript1667.chr11.nic@ACCS transcript1667.chr11.nic protein_coding 44066327,44067628,44071256,44073447,44074612,44075526,44077323,44081020,44081179,44083169,44083424,44083695 44066701,44067915,44071315,44073517,44074681,44075592,44079620,44081065,44081320,44083311,44083577,44084019 Gene ID= ENSG00000110455.13 TPM= 3.62 Transcript Type= NA chr11 44066268 44084214 44066268 44084214 + ENST00000263776.8@ACCS ENST00000263776.8 protein_coding 44066268,44067628,44071256,44073447,44074612,44075526,44077279,44077845,44078684,44079531,44081020,44081179,44083169,44083424,44083695 44066701,44067915,44071315,44073517,44074681,44075592,44077376,44077922,44078784,44079620,44081065,44081320,44083311,44083577,44084214 Gene ID= ENSG00000110455.13 TPM= 19.62 Transcript Type= protein_coding chr11 44066472 44245425 44066472 44245425 + transcript1642.chr11.nnic@EXT2 transcript1642.chr11.nnic protein_coding 44066472,44067628,44071256,44073447,44074612,44075526,44077279,44077845,44078684,44079531,44081020,44081179,44083169,44107683,44109194,44114185,44124789,44126816,44130045,44171611,44197829,44206793,44232353,44234115,44236293,44244149 44066701,44067915,44071315,44073517,44074681,44075592,44077376,44077922,44078784,44079620,44081065,44081320,44083311,44108248,44109283,44114301,44124984,44126955,44130138,44171742,44198018,44206959,44232496,44234243,44236375,44245425 Gene ID= ENSG00000151348.13 TPM= 7.7 Transcript Type= NA chr11 44095657 44244931 44095657 44244931 + transcript1668.chr11.nnic@EXT2 transcript1668.chr11.nnic protein_coding 44095657,44107683,44109194,44114185,44130045,44171611,44197829,44206793,44232353,44234115,44236293,44244149 44095852,44108248,44109283,44114301,44130138,44171742,44198018,44206959,44232496,44234243,44236375,44244931 Gene ID= ENSG00000151348.13 TPM= 3.17 Transcript Type= NA chr11 44095657 44117746 44095657 44117746 + transcript1673.chr11.nic@EXT2 transcript1673.chr11.nic protein_coding 44095657,44107683,44109194,44114185,44115901 44095852,44108248,44109283,44114301,44117746 Gene ID= ENSG00000151348.13 TPM= 2.72 Transcript Type= NA chr11 44565576 44619763 44565576 44619763 + transcript1681.chr11.nic@CD82 transcript1681.chr11.nic protein_coding 44565576,44587475,44594643,44600158,44605058,44605355,44615272,44618162,44619049 44565736,44587556,44594725,44600230,44605182,44605429,44615373,44618365,44619763 Gene ID= ENSG00000085117.11 TPM= 1.81 Transcript Type= NA chr11 44565591 44620363 44565591 44620363 + ENST00000227155.8@CD82 ENST00000227155.8 protein_coding 44565591,44587475,44594643,44600158,44605058,44605355,44615272,44618162,44618640,44619049 44565736,44587556,44594725,44600230,44605182,44605429,44615373,44618365,44618723,44620363 Gene ID= ENSG00000085117.11 TPM= 34.41 Transcript Type= protein_coding chr11 44726906 44932421 44726906 44932421 + transcript1685.chr11.nic@TSPAN18 transcript1685.chr11.nic protein_coding 44726906,44764426,44860328,44897752,44906407,44909705,44917972,44919214,44919817,44926674,44929131 44727287,44764512,44860469,44897828,44906479,44909899,44918046,44919312,44919999,44926757,44932421 Gene ID= ENSG00000157570.11 TPM= 17.21 Transcript Type= NA chr11 44932348 44951306 44932348 44951306 - ENST00000616990.4@TP53I11 ENST00000616990.4 protein_coding 44950877,44938207,44937555,44937304,44936803,44935561,44932348 44951306,44938366,44937613,44937352,44936899,44935662,44935017 Gene ID= ENSG00000175274.18 TPM= 76.07 Transcript Type= protein_coding chr11 45146640 45214743 45146640 45214743 + transcript1695.chr11.nic@PRDM11 transcript1695.chr11.nic protein_coding 45146640,45181761,45182246,45182861,45204711,45208874,45212469 45146877,45181885,45182349,45183123,45204778,45209295,45214743 Gene ID= ENSG00000019485.13 TPM= 4.07 Transcript Type= NA chr11 45147308 45214743 45147308 45214743 + transcript1697.chr11.nic@PRDM11 transcript1697.chr11.nic protein_coding 45147308,45181761,45182246,45182861,45204711,45208874,45212469 45147581,45181885,45182349,45183123,45204778,45209295,45214743 Gene ID= ENSG00000019485.13 TPM= 2.26 Transcript Type= NA chr11 45648877 45665622 45648877 45665622 - ENST00000308064.6@CHST1 ENST00000308064.6 protein_coding 45665178,45652521,45651993,45648877 45665622,45652606,45652090,45650965 Gene ID= ENSG00000175264.7 TPM= 10.87 Transcript Type= protein_coding chr11 45804083 45813021 45804083 45813021 + transcript1702.chr11.nic@SLC35C1 transcript1702.chr11.nic protein_coding 45804083,45805810,45810776 45804420,45806336,45813021 Gene ID= ENSG00000181830.8 TPM= 7.7 Transcript Type= NA chr11 45805119 45813021 45805119 45813021 + transcript1705.chr11.nic@SLC35C1 transcript1705.chr11.nic protein_coding 45805119,45805810,45810776 45805316,45806336,45813021 Gene ID= ENSG00000181830.8 TPM= 5.89 Transcript Type= NA chr11 45847487 45883243 45847487 45883243 + transcript1707.chr11.nnic@CRY2 transcript1707.chr11.nnic protein_coding 45847487,45855982,45858731,45860848,45862060,45867612,45869506,45870053,45870330,45870842,45872092,45880914,45882149 45847705,45856090,45858873,45861032,45862148,45867752,45869817,45870204,45870532,45870934,45872233,45882066,45883243 Gene ID= ENSG00000121671.11 TPM= 2.26 Transcript Type= NA chr11 45847434 45883246 45847434 45883246 + transcript1709.chr11.nic@CRY2 transcript1709.chr11.nic protein_coding 45847434,45855982,45858731,45860848,45862060,45867612,45869506,45870053,45870330,45872092,45880914 45847705,45856090,45858873,45861032,45862148,45867752,45869817,45870204,45870934,45872233,45883246 Gene ID= ENSG00000121671.11 TPM= 4.07 Transcript Type= NA chr11 45899893 45906469 45899893 45906469 + transcript1714.chr11.nic@MAPK8IP1 transcript1714.chr11.nic protein_coding 45899893,45901980,45902372,45903365,45903989,45904455,45904718,45904971,45905151,45905649 45900452,45902061,45903184,45903440,45904161,45904564,45904834,45905041,45905249,45906469 Gene ID= ENSG00000121653.11 TPM= 55.69 Transcript Type= NA chr11 45885651 45906465 45885651 45906465 + ENST00000241014.6@MAPK8IP1 ENST00000241014.6 protein_coding 45885651,45898085,45900138,45901980,45902372,45903365,45903989,45904455,45904718,45904971,45905151,45905649 45885921,45898190,45900452,45902061,45903184,45903440,45904161,45904564,45904834,45905041,45905249,45906465 Gene ID= ENSG00000121653.11 TPM= 23.09 Transcript Type= protein_coding chr11 45910174 45918055 45910174 45918055 - ENST00000378750.9@PEX16 ENST00000378750.9 protein_coding 45917700,45917458,45916227,45915703,45915468,45914604,45914316,45914131,45913819,45910898,45910174 45918055,45917493,45916303,45915836,45915568,45914684,45914468,45914203,45913938,45910962,45910312 Gene ID= ENSG00000121680.15 TPM= 28.98 Transcript Type= protein_coding chr11 45922692 45929096 45922692 45929096 + ENST00000401752.5@LARGE2 ENST00000401752.5 protein_coding 45922692,45922821,45923473,45924154,45924506,45924785,45926039,45926222,45926442,45926711,45927315,45927920,45928177,45928630 45922728,45923167,45923555,45924277,45924677,45924889,45926151,45926347,45926597,45926871,45927593,45928069,45928372,45929096 Gene ID= ENSG00000165905.17 TPM= 3.62 Transcript Type= protein_coding chr11 46277627 46315385 46277627 46315385 + transcript1739.chr11.nic@CREB3L1 transcript1739.chr11.nic protein_coding 46277627,46299935,46307816,46309989,46311032,46312325,46312612,46312851,46315171 46278213,46300163,46308000,46310067,46311189,46312474,46312670,46312919,46315385 Gene ID= ENSG00000157613.10 TPM= 2.72 Transcript Type= NA chr11 46277661 46321422 46277661 46321422 + ENST00000621158.4@CREB3L1 ENST00000621158.4 protein_coding 46277661,46299935,46307816,46309989,46311032,46312325,46312612,46312851,46316286,46317361,46320264,46320710 46278213,46300163,46308000,46310067,46311189,46312474,46312670,46312919,46316385,46317487,46320528,46321422 Gene ID= ENSG00000157613.10 TPM= 13.58 Transcript Type= protein_coding chr11 46338798 46380555 46338798 46380555 + transcript1741.chr11.nnic@DGKZ transcript1741.chr11.nnic protein_coding 46338798,46345256,46367291,46367652,46368002,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831 46338890,46345585,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371835,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380555 Gene ID= ENSG00000149091.15 TPM= 3.34 Transcript Type= NA chr11 46347498 46380555 46347498 46380555 + transcript1742.chr11.nnic@DGKZ transcript1742.chr11.nnic protein_coding 46347498,46367291,46367652,46368002,46368178,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831 46347820,46367399,46367747,46368079,46368303,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380555 Gene ID= ENSG00000149091.15 TPM= 3.79 Transcript Type= NA chr11 46332905 46380554 46332905 46380554 + ENST00000343674.10@DGKZ ENST00000343674.10 protein_coding 46332905,46367291,46367652,46368005,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831 46333487,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380554 Gene ID= ENSG00000149091.15 TPM= 3.79 Transcript Type= protein_coding chr11 46347464 46380555 46347464 46380555 + transcript1746.chr11.nnic@DGKZ transcript1746.chr11.nnic protein_coding 46347464,46367291,46367652,46368002,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831 46347820,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372843,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380555 Gene ID= ENSG00000149091.15 TPM= 3.34 Transcript Type= NA chr11 46347552 46380555 46347552 46380555 + transcript1747.chr11.nic@DGKZ transcript1747.chr11.nic protein_coding 46347552,46367291,46367652,46368002,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378894,46379203,46379469,46379831 46347820,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380555 Gene ID= ENSG00000149091.15 TPM= 2.98 Transcript Type= NA chr11 46347491 46380555 46347491 46380555 + transcript1754.chr11.nnic@DGKZ transcript1754.chr11.nnic protein_coding 46347491,46367291,46367652,46368002,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073,46378198,46378457,46378991,46379203,46379469,46379831 46347820,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46377212,46378229,46378500,46379111,46379236,46379568,46380555 Gene ID= ENSG00000149091.15 TPM= 3.34 Transcript Type= NA chr11 46347452 46378115 46347452 46378115 + transcript1756.chr11.nic@DGKZ transcript1756.chr11.nic protein_coding 46347452,46367291,46367652,46368002,46369494,46369941,46371313,46371487,46371704,46372075,46372428,46372617,46372771,46372961,46374157,46374399,46374604,46374766,46374934,46375432,46375851,46376066,46376328,46376524,46377073 46347820,46367399,46367747,46368079,46369550,46370009,46371384,46371603,46371775,46372170,46372510,46372677,46372884,46373101,46374235,46374454,46374666,46374839,46375045,46375631,46375951,46376145,46376397,46376564,46378115 Gene ID= ENSG00000149091.15 TPM= 4.79 Transcript Type= NA chr11 46381068 46383825 46381068 46383825 + ENST00000359803.7@MDK ENST00000359803.7 protein_coding 46381068,46382057,46382294,46382587,46383469 46381288,46382133,46382461,46382748,46383825 Gene ID= ENSG00000110492.15 TPM= 5.22 Transcript Type= protein_coding chr11 46381711 46383837 46381711 46383837 + ENST00000395565.5@MDK ENST00000395565.5 protein_coding 46381711,46382057,46382294,46382587,46383469 46381885,46382133,46382461,46382748,46383837 Gene ID= ENSG00000110492.15 TPM= 4.32 Transcript Type= protein_coding chr11 46380756 46383799 46380756 46383799 + ENST00000405308.6@MDK ENST00000405308.6 protein_coding 46380756,46382057,46382294,46382587,46383469 46381183,46382133,46382461,46382748,46383799 Gene ID= ENSG00000110492.15 TPM= 28.77 Transcript Type= protein_coding chr11 46381676 46383806 46381676 46383806 + ENST00000395566.8@MDK ENST00000395566.8 protein_coding 46381676,46382057,46382294,46382587,46383469 46381758,46382133,46382461,46382748,46383806 Gene ID= ENSG00000110492.15 TPM= 97.59 Transcript Type= protein_coding chr11 46381753 46383783 46381753 46383783 + ENST00000407067.1@MDK ENST00000407067.1 protein_coding 46381753,46382294,46382587,46383469 46382133,46382461,46382748,46383783 Gene ID= ENSG00000110492.15 TPM= 3.78 Transcript Type= protein_coding chr11 46396411 46594065 46396411 46594065 - transcript1768.chr11.nic@AMBRA1 transcript1768.chr11.nic protein_coding 46593828,46548246,46547817,46547113,46545604,46543975,46543252,46541945,46512727,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396411 46594065,46548500,46547875,46547296,46545776,46544041,46543398,46542981,46512813,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943 Gene ID= ENSG00000110497.14 TPM= 26.94 Transcript Type= NA chr11 46396411 46594065 46396411 46594065 - transcript1770.chr11.nic@AMBRA1 transcript1770.chr11.nic protein_coding 46593828,46548246,46547817,46547113,46545604,46543975,46541945,46512727,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396411 46594065,46548500,46547875,46547296,46545776,46544041,46543398,46512813,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943 Gene ID= ENSG00000110497.14 TPM= 9.73 Transcript Type= NA chr11 46396411 46594065 46396411 46594065 - transcript1772.chr11.nic@AMBRA1 transcript1772.chr11.nic protein_coding 46593828,46548246,46547817,46547113,46545604,46543975,46543252,46541945,46512727,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396411 46594065,46548500,46547875,46547296,46545776,46544041,46543398,46542981,46512813,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943 Gene ID= ENSG00000110497.14 TPM= 6.11 Transcript Type= NA chr11 46396411 46594065 46396411 46594065 - transcript1773.chr11.nic@AMBRA1 transcript1773.chr11.nic protein_coding 46593828,46548246,46547817,46547113,46545604,46543975,46541945,46508191,46494124,46493608,46443488,46434849,46433474,46417913,46410276,46408513,46396411 46594065,46548500,46547875,46547296,46545776,46544041,46543398,46508370,46494204,46493708,46443598,46435037,46433628,46418052,46410368,46408706,46397943 Gene ID= ENSG00000110497.14 TPM= 8.83 Transcript Type= NA chr11 46617557 46674816 46617557 46674816 + transcript1780.chr11.nic@ATG13 transcript1780.chr11.nic protein_coding 46617557,46618260,46630045,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255 46617890,46618375,46630100,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674816 Gene ID= ENSG00000175224.16 TPM= 15.74 Transcript Type= NA chr11 46617561 46674816 46617561 46674816 + transcript1785.chr11.nic@ATG13 transcript1785.chr11.nic protein_coding 46617561,46618325,46630045,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255 46617890,46618375,46630100,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674816 Gene ID= ENSG00000175224.16 TPM= 6.68 Transcript Type= NA chr11 46617557 46674816 46617557 46674816 + transcript1790.chr11.nic@ATG13 transcript1790.chr11.nic protein_coding 46617557,46618260,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255 46617890,46618375,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674816 Gene ID= ENSG00000175224.16 TPM= 7.59 Transcript Type= NA chr11 46617545 46674816 46617545 46674816 + transcript1793.chr11.nic@ATG13 transcript1793.chr11.nic protein_coding 46617545,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255 46617890,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674816 Gene ID= ENSG00000175224.16 TPM= 15.74 Transcript Type= NA chr11 46617577 46674520 46617577 46674520 + ENST00000524625.5@ATG13 ENST00000524625.5 protein_coding 46617577,46630045,46644279,46645339,46645870,46649137,46650177,46656233,46657095,46657524,46659392,46665383,46667773,46668499,46668794,46669404,46672255 46617890,46630100,46644360,46645419,46645989,46649183,46650317,46656273,46657191,46657622,46659485,46665519,46667887,46668576,46668910,46669532,46674520 Gene ID= ENSG00000175224.16 TPM= 61.77 Transcript Type= protein_coding chr11 46677075 46700667 46677075 46700667 - transcript1796.chr11.nic@ARHGAP1 transcript1796.chr11.nic protein_coding 46700551,46695975,46695660,46688173,46681293,46681011,46680640,46680487,46680205,46679648,46679365,46677075 46700667,46696156,46695755,46688260,46681379,46681109,46680747,46680563,46680282,46679776,46679468,46679225 Gene ID= ENSG00000175220.11 TPM= 2.72 Transcript Type= NA chr11 46677080 46700599 46677080 46700599 - ENST00000311956.8@ARHGAP1 ENST00000311956.8 protein_coding 46700551,46695975,46695660,46688173,46682051,46681293,46681011,46680640,46680487,46680205,46679648,46679365,46677080 46700599,46696156,46695755,46688260,46682182,46681379,46681109,46680747,46680563,46680282,46679776,46679468,46679225 Gene ID= ENSG00000175220.11 TPM= 162.09 Transcript Type= protein_coding chr11 46700818 46705912 46700818 46705912 + ENST00000311764.2@ZNF408 ENST00000311764.2 protein_coding 46700818,46701399,46702704,46702984,46704353 46701099,46701676,46702765,46703243,46705912 Gene ID= ENSG00000175213.2 TPM= 23.54 Transcript Type= protein_coding chr11 46743534 46826850 46743534 46826850 - transcript1801.chr11.nic@CKAP5 transcript1801.chr11.nic protein_coding 46826762,46821175,46818310,46816198,46811007,46809742,46809400,46808031,46801200,46798083,46797805,46796812,46795594,46790470,46790076,46788681,46784488,46783274,46780428,46780194,46778460,46778139,46777439,46776255,46770788,46769963,46767575,46765131,46763481,46762976,46762627,46762000,46760612,46759269,46758923,46754888,46753310,46752635,46751346,46751118,46750528,46750274,46744426,46743534 46826850,46821268,46818503,46816404,46811178,46809874,46809500,46808144,46801304,46798172,46797969,46796940,46795776,46790583,46790186,46788773,46784673,46783368,46780485,46780319,46778599,46778313,46777552,46776383,46770982,46770098,46767663,46765256,46763630,46763179,46762762,46762193,46760784,46759442,46759043,46755067,46753497,46752710,46751534,46751255,46750611,46750433,46744577,46744265 Gene ID= ENSG00000175216.14 TPM= 18.11 Transcript Type= NA chr11 46856720 46865472 46856720 46865472 - transcript1807.chr11.nnic@LRP4 transcript1807.chr11.nnic protein_coding 46865418,46865119,46864448,46862606,46856720 46865472,46865186,46864535,46862747,46859315 Gene ID= ENSG00000134569.9 TPM= 7.24 Transcript Type= NA chr11 46856868 46918622 46856868 46918622 - ENST00000378623.5@LRP4 ENST00000378623.5 protein_coding 46918328,46902783,46900262,46899863,46899387,46898904,46898558,46896869,46896210,46895884,46895166,46894589,46892973,46890277,46889944,46889411,46886325,46886091,46883871,46881702,46879126,46878907,46877199,46876744,46876466,46875804,46875456,46874800,46873375,46873100,46871525,46868988,46868600,46867979,46865119,46864448,46862606,46856868 46918622,46902929,46900378,46899976,46899503,46899032,46898677,46896994,46896335,46896018,46895291,46894819,46893129,46890494,46890120,46889533,46886533,46886172,46883976,46881903,46879315,46879038,46877339,46876830,46876637,46875966,46875681,46875103,46873593,46873234,46871633,46869132,46868713,46868114,46865186,46864535,46862747,46859315 Gene ID= ENSG00000134569.9 TPM= 6.34 Transcript Type= protein_coding chr11 46936717 47160952 46936717 47160952 + transcript1823.chr11.nic@C11orf49 transcript1823.chr11.nic protein_coding 46936717,46987208,47052388,47137645,47155176,47157023,47157813,47159633 46936851,46987310,47052518,47137729,47155261,47157218,47157922,47160952 Gene ID= ENSG00000149179.13 TPM= 2.72 Transcript Type= NA chr11 46936717 47164376 46936717 47164376 + transcript1825.chr11.nnic@C11orf49 transcript1825.chr11.nnic protein_coding 46936717,46987208,47052388,47137645,47155176,47157023,47157813,47164093 46936851,46987310,47052518,47137729,47155261,47157218,47157922,47164376 Gene ID= ENSG00000149179.13 TPM= 1.81 Transcript Type= NA chr11 46936747 47162228 46936747 47162228 + ENST00000278460.11@C11orf49 ENST00000278460.11 protein_coding 46936747,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161464 46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162228 Gene ID= ENSG00000149179.13 TPM= 21.05 Transcript Type= protein_coding chr11 46936779 47162245 46936779 47162245 + ENST00000525895.5@C11orf49 ENST00000525895.5 protein_coding 46936779,47052388,47137645,47155176,47157023,47157813,47161127,47161464 46936851,47052518,47137729,47155261,47157218,47157922,47161190,47162245 Gene ID= ENSG00000149179.13 TPM= 8.08 Transcript Type= nonsense_mediated_decay chr11 46936778 47162247 46936778 47162247 + ENST00000378615.7@C11orf49 ENST00000378615.7 protein_coding 46936778,46987208,47052388,47137645,47155176,47157023,47157813,47161127,47161446 46936851,46987310,47052518,47137729,47155261,47157218,47157922,47161190,47162247 Gene ID= ENSG00000149179.13 TPM= 3.55 Transcript Type= protein_coding chr11 46936768 47162247 46936768 47162247 + ENST00000395460.6@C11orf49 ENST00000395460.6 protein_coding 46936768,46987208,47052388,47137645,47155176,47157023,47157813,47161127 46936851,46987310,47052518,47137729,47155261,47157218,47157922,47162247 Gene ID= ENSG00000149179.13 TPM= 6.27 Transcript Type= protein_coding chr11 47164296 47186570 47164296 47186570 - transcript1812.chr11.nic@ARFGAP2 transcript1812.chr11.nic protein_coding 47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47176782,47176516,47175851,47175182,47175015,47173759,47173426,47172281,47171664,47171426,47168123,47167909,47166760,47166506,47166268,47164296 47186570,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046,47176634,47175923,47175313,47175098,47173840,47173482,47172333,47171800,47171557,47168251,47168043,47166886,47166599,47166386,47165502 Gene ID= ENSG00000149182.14 TPM= 261.25 Transcript Type= NA chr11 47177525 47186407 47177525 47186407 - ENST00000298838.10@PACSIN3 ENST00000298838.10 protein_coding 47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179159,47178894,47178366,47177525 47186407,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179030,47178487,47178046 Gene ID= ENSG00000165912.15 TPM= 44.82 Transcript Type= protein_coding chr11 47177557 47186440 47177557 47186440 - ENST00000532457.5@PACSIN3 ENST00000532457.5 protein_coding 47186349,47183004,47182674,47182403,47180455,47180186,47179411,47179155,47178894,47178366,47177557 47186440,47183069,47182764,47182559,47180690,47180341,47179586,47179279,47179027,47178487,47178046 Gene ID= ENSG00000165912.15 TPM= 8.15 Transcript Type= nonsense_mediated_decay chr11 47214435 47239238 47214435 47239238 + transcript1829.chr11.nic@DDB2 transcript1829.chr11.nic protein_coding 47214435,47215071,47216336,47216858,47232814,47234573,47234757,47235270,47237837,47238138,47238800 47214674,47215263,47216472,47217049,47232959,47234672,47234934,47235412,47238001,47238183,47239238 Gene ID= ENSG00000134574.11 TPM= 11.32 Transcript Type= NA chr11 47214942 47239240 47214942 47239240 + ENST00000256996.8@DDB2 ENST00000256996.8 protein_coding 47214942,47216336,47216858,47232814,47234573,47234757,47235270,47237837,47238138,47238800 47215263,47216472,47217049,47232959,47234672,47234934,47235412,47238001,47238183,47239240 Gene ID= ENSG00000134574.11 TPM= 53.88 Transcript Type= protein_coding chr11 47239302 47248906 47239302 47248906 - ENST00000256997.7@ACP2 ENST00000256997.7 protein_coding 47248676,47248038,47247641,47245682,47245474,47245305,47244735,47243239,47243018,47242723,47239302 47248906,47248133,47247727,47245834,47245572,47245394,47244867,47243321,47243124,47242898,47240249 Gene ID= ENSG00000134575.9 TPM= 101.12 Transcript Type= protein_coding chr11 47239303 47248814 47239303 47248814 - transcript1843.chr11.nnic@ACP2 transcript1843.chr11.nnic protein_coding 47248676,47248038,47247641,47245682,47245474,47245305,47244735,47243239,47243018,47242723,47239303 47248814,47248133,47247727,47245834,47245572,47245394,47244867,47243321,47243124,47242898,47240166 Gene ID= ENSG00000134575.9 TPM= 7.85 Transcript Type= NA chr11 47257627 47268849 47257627 47268849 + transcript1845.chr11.nic@NR1H3 transcript1845.chr11.nic protein_coding 47257627,47257996,47259180,47259791,47260409,47261241,47261547,47261919,47267913,47268261,47268550 47257735,47258129,47259259,47259979,47260675,47261449,47261726,47262018,47268026,47268355,47268849 Gene ID= ENSG00000025434.18 TPM= 16.3 Transcript Type= NA chr11 47248916 47268812 47248916 47268812 + ENST00000395397.7@NR1H3 ENST00000395397.7 protein_coding 47248916,47259791,47260409,47261241,47261547,47261919,47267913,47268261,47268550 47248999,47259979,47260675,47261449,47261726,47262018,47268026,47268355,47268812 Gene ID= ENSG00000025434.18 TPM= 2.72 Transcript Type= protein_coding chr11 47270133 47330038 47270133 47330038 + transcript1863.chr11.nic@MADD transcript1863.chr11.nic protein_coding 47270133,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046 47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295567,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330038 Gene ID= ENSG00000110514.19 TPM= 4.96 Transcript Type= NA chr11 47270023 47330038 47270023 47330038 + transcript1865.chr11.nic@MADD transcript1865.chr11.nic protein_coding 47270023,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046 47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285194,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295567,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330038 Gene ID= ENSG00000110514.19 TPM= 4.66 Transcript Type= NA chr11 47269674 47330031 47269674 47330031 + ENST00000402799.5@MADD ENST00000402799.5 protein_coding 47269674,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046 47269750,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285065,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295579,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330031 Gene ID= ENSG00000110514.19 TPM= 8.58 Transcript Type= protein_coding chr11 47270156 47330030 47270156 47330030 + ENST00000402192.6@MADD ENST00000402192.6 protein_coding 47270156,47273827,47274563,47275899,47276732,47278165,47278999,47281575,47282381,47282813,47284178,47284375,47284941,47285451,47286433,47289391,47289867,47290149,47290610,47293883,47295496,47295897,47308591,47309281,47309507,47311732,47315220,47323671,47324265,47324471,47326738,47328658,47329046 47270246,47273976,47275159,47276202,47276863,47278278,47279079,47281753,47282616,47282969,47284281,47284565,47285194,47285590,47286534,47289493,47290053,47290299,47290816,47293983,47295576,47296055,47308699,47309401,47309612,47311842,47315327,47323835,47324337,47324577,47326807,47328704,47330030 Gene ID= ENSG00000110514.19 TPM= 5.8 Transcript Type= protein_coding chr11 47331398 47351839 47331398 47351839 - transcript1876.chr11.nic@MYBPC3 transcript1876.chr11.nic protein_coding 47351239,47350502,47350014,47349774,47348424,47347857,47347651,47347426,47346627,47346207,47343492,47343021,47342830,47342578,47341991,47341138,47341003,47339651,47339324,47338520,47337690,47337391,47335877,47335042,47333922,47333557,47333194,47332814,47332566,47332072,47331845,47331398 47351839,47350615,47350112,47349922,47348541,47347905,47347680,47347479,47346647,47346370,47343624,47343148,47342935,47342744,47342156,47341244,47341032,47339790,47339404,47338679,47337794,47337579,47336011,47335209,47334010,47333752,47333333,47332973,47332702,47332258,47331881,47331716 Gene ID= ENSG00000134571.10 TPM= 4.53 Transcript Type= NA chr11 47331406 47352702 47331406 47352702 - ENST00000256993.8@MYBPC3 ENST00000256993.8 protein_coding 47352623,47351239,47350502,47350014,47349774,47348424,47347857,47347651,47347426,47346627,47346207,47343492,47343021,47342830,47342578,47341991,47341138,47341003,47339651,47339324,47338520,47337690,47337391,47335877,47335042,47333922,47333557,47333194,47332814,47332566,47332072,47331845,47331406 47352702,47351505,47350615,47350112,47349922,47348541,47347905,47347680,47347479,47346647,47346370,47343624,47343148,47342935,47342744,47342156,47341244,47341032,47339790,47339404,47338679,47337794,47337579,47336011,47335209,47334010,47333752,47333333,47332973,47332702,47332258,47331881,47331716 Gene ID= ENSG00000134571.10 TPM= 6.34 Transcript Type= protein_coding chr11 47354860 47378576 47354860 47378576 - ENST00000378538.7@SPI1 ENST00000378538.7 protein_coding 47378309,47375633,47359853,47358844,47354860 47378576,47375729,47360040,47359006,47355546 Gene ID= ENSG00000066336.11 TPM= 20.83 Transcript Type= protein_coding chr11 47408430 47416499 47408430 47416499 + transcript1883.chr11.nic@SLC39A13 transcript1883.chr11.nic protein_coding 47408430,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47415288,47416325 47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47415496,47416499 Gene ID= ENSG00000165915.13 TPM= 14.04 Transcript Type= NA chr11 47408430 47416554 47408430 47416554 + transcript1888.chr11.nic@SLC39A13 transcript1888.chr11.nic protein_coding 47408430,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060,47415288 47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416554 Gene ID= ENSG00000165915.13 TPM= 210.72 Transcript Type= NA chr11 47408523 47416497 47408523 47416497 + transcript1891.chr11.nic@SLC39A13 transcript1891.chr11.nic protein_coding 47408523,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415060 47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47416497 Gene ID= ENSG00000165915.13 TPM= 12.86 Transcript Type= NA chr11 47408629 47416501 47408629 47416501 + ENST00000362021.8@SLC39A13 ENST00000362021.8 protein_coding 47408629,47410087,47411926,47412346,47413400,47413597,47414425,47414777,47415039,47415288 47408662,47410395,47412039,47412467,47413507,47413686,47414475,47414909,47415159,47416501 Gene ID= ENSG00000165915.13 TPM= 1.99 Transcript Type= protein_coding chr11 47418768 47426237 47418768 47426237 - transcript1897.chr11.nic@PSMC3 transcript1897.chr11.nic protein_coding 47426117,47425867,47425121,47424607,47424429,47424046,47422830,47422574,47420631,47420264,47419116,47418768 47426237,47425950,47425246,47424711,47424491,47424183,47422973,47422722,47420727,47420409,47419197,47418945 Gene ID= ENSG00000165916.8 TPM= 10.41 Transcript Type= NA chr11 47418769 47426473 47418769 47426473 - ENST00000619920.4@PSMC3 ENST00000619920.4 protein_coding 47426205,47425867,47425121,47424607,47424429,47424046,47422830,47422574,47420631,47420264,47419116,47418769 47426473,47425950,47425246,47424711,47424491,47424183,47422973,47422722,47420727,47420409,47419197,47418945 Gene ID= ENSG00000165916.8 TPM= 159.83 Transcript Type= protein_coding chr11 47437764 47449198 47437764 47449198 - transcript1904.chr11.nnic@RAPSN transcript1904.chr11.nnic protein_coding 47448773,47447812,47442656,47441823,47441611,47438732,47437764 47449198,47448150,47442814,47441921,47441733,47438931,47438047 Gene ID= ENSG00000165917.9 TPM= 1.81 Transcript Type= NA chr11 47437757 47449178 47437757 47449178 - ENST00000298854.6@RAPSN ENST00000298854.6 protein_coding 47448773,47447812,47442656,47441823,47441611,47441159,47438732,47437757 47449178,47448150,47442814,47441921,47441733,47441212,47438931,47438047 Gene ID= ENSG00000165917.9 TPM= 1.81 Transcript Type= protein_coding chr11 47465935 47553140 47465935 47553140 - transcript1908.chr11.nnic@CELF1 transcript1908.chr11.nnic protein_coding 47552992,47499453,47494331,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47465935 47553140,47499604,47494443,47489024,47487241,47486798,47484523,47483532,47482856,47478952,47477425,47476956,47475521,47473231,47472357,47468891 Gene ID= ENSG00000149187.18 TPM= 1.81 Transcript Type= NA chr11 47466580 47553142 47466580 47553142 - transcript1914.chr11.nnic@CELF1 transcript1914.chr11.nnic protein_coding 47552992,47536620,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47466580 47553142,47536730,47489024,47487241,47486798,47484523,47483532,47482856,47478940,47477425,47476956,47475521,47473231,47472357,47468891 Gene ID= ENSG00000149187.18 TPM= 1.81 Transcript Type= NA chr11 47465933 47553117 47465933 47553117 - ENST00000310513.10@CELF1 ENST00000310513.10 protein_coding 47552992,47488837,47487159,47486750,47484389,47483453,47482695,47478877,47477297,47476846,47475336,47473088,47472191,47465933 47553117,47489024,47487241,47486798,47484523,47483532,47482856,47478940,47477425,47476956,47475521,47473231,47472357,47468891 Gene ID= ENSG00000149187.18 TPM= 21.73 Transcript Type= protein_coding chr11 47579010 47584562 47579010 47584562 + ENST00000263774.8@NDUFS3 ENST00000263774.8 protein_coding 47579010,47579269,47580525,47580835,47582088,47582349,47584314 47579158,47579334,47580622,47580984,47582213,47582468,47584562 Gene ID= ENSG00000213619.9 TPM= 108.67 Transcript Type= protein_coding chr11 47565601 47571769 47565601 47571769 + ENST00000326674.9@PTPMT1 ENST00000326674.9 protein_coding 47565601,47565906,47569700,47571471 47565796,47565986,47569891,47571769 Gene ID= ENSG00000110536.13 TPM= 38.94 Transcript Type= protein_coding chr11 47572197 47578757 47572197 47578757 - transcript1928.chr11.nic@KBTBD4 transcript1928.chr11.nic protein_coding 47578541,47577411,47575593,47572197 47578757,47578028,47575699,47573790 Gene ID= ENSG00000123444.13 TPM= 3.62 Transcript Type= NA chr11 47572198 47578969 47572198 47578969 - ENST00000395288.6@KBTBD4 ENST00000395288.6 protein_coding 47578828,47577411,47575593,47572198 47578969,47578028,47575699,47573790 Gene ID= ENSG00000123444.13 TPM= 9.06 Transcript Type= protein_coding chr11 47572197 47578969 47572197 47578969 - transcript1931.chr11.nic@KBTBD4 transcript1931.chr11.nic protein_coding 47578912,47577411,47575593,47572197 47578969,47578028,47575699,47573790 Gene ID= ENSG00000123444.13 TPM= 4.53 Transcript Type= NA chr11 47572227 47579015 47572227 47579015 - ENST00000430070.6@KBTBD4 ENST00000430070.6 protein_coding 47578933,47577411,47575593,47572227 47579015,47578028,47575699,47573790 Gene ID= ENSG00000123444.13 TPM= 56.14 Transcript Type= protein_coding chr11 47572198 47578789 47572198 47578789 - ENST00000533290.5@KBTBD4 ENST00000533290.5 protein_coding 47577411,47575593,47572198 47578789,47575699,47573790 Gene ID= ENSG00000123444.13 TPM= 2.72 Transcript Type= protein_coding chr11 47617307 47642606 47617307 47642606 - transcript1938.chr11.nic@MTCH2 transcript1938.chr11.nic protein_coding 47642401,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47625674,47622701,47617307 47642606,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47625741,47622776,47618919 Gene ID= ENSG00000109919.9 TPM= 4.53 Transcript Type= NA chr11 47617307 47642539 47617307 47642539 - transcript1941.chr11.nnic@MTCH2 transcript1941.chr11.nnic protein_coding 47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47622701,47617307 47642539,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47622776,47618919 Gene ID= ENSG00000109919.9 TPM= 2.72 Transcript Type= NA chr11 47617316 47642623 47617316 47642623 - ENST00000302503.7@MTCH2 ENST00000302503.7 protein_coding 47642379,47638967,47638699,47635545,47634672,47631654,47631036,47630555,47628953,47627080,47625674,47622701,47617316 47642623,47639051,47638805,47635571,47634734,47631711,47631087,47630614,47629046,47627127,47625741,47622776,47618919 Gene ID= ENSG00000109919.9 TPM= 98.7 Transcript Type= protein_coding chr11 47716518 47767317 47716518 47767317 - transcript1943.chr11.nic@FNBP4 transcript1943.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47732117,47731374,47725737,47724468,47724028,47722976,47719929,47716518 47767317,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47731561,47725836,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 2.72 Transcript Type= NA chr11 47716518 47767331 47716518 47767331 - transcript1945.chr11.nic@FNBP4 transcript1945.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47732117,47731374,47724468,47724028,47722976,47719929,47716518 47767331,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47731561,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 6.34 Transcript Type= NA chr11 47716518 47767454 47716518 47767454 - transcript1947.chr11.nic@FNBP4 transcript1947.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732117,47731374,47724468,47724028,47722976,47719929,47716518 47767454,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 6.34 Transcript Type= NA chr11 47716518 47767333 47716518 47767333 - transcript1949.chr11.nic@FNBP4 transcript1949.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722976,47719929,47716518 47767333,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 1.81 Transcript Type= NA chr11 47716518 47767316 47716518 47767316 - transcript1952.chr11.nnic@FNBP4 transcript1952.chr11.nnic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47736616,47734025,47732117,47731374,47724468,47724028,47722976,47719929,47716518 47767316,47765362,47754664,47753102,47751290,47751036,47746394,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 1.81 Transcript Type= NA chr11 47716518 47767340 47716518 47767340 - transcript1953.chr11.nic@FNBP4 transcript1953.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47731374,47724468,47724028,47722976,47719929,47716518 47767340,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 3.62 Transcript Type= NA chr11 47722947 47767327 47722947 47767327 - transcript1955.chr11.nic@FNBP4 transcript1955.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47732117,47731374,47724468,47724028,47722947 47767327,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47732219,47731561,47724778,47724172,47723316 Gene ID= ENSG00000109920.12 TPM= 1.81 Transcript Type= NA chr11 47744965 47767329 47744965 47767329 - transcript1959.chr11.nic@FNBP4 transcript1959.chr11.nic protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47744965 47767329,47765362,47754664,47753102,47751290,47751036,47746394 Gene ID= ENSG00000109920.12 TPM= 2.72 Transcript Type= NA chr11 47716517 47767301 47716517 47767301 - ENST00000263773.9@FNBP4 ENST00000263773.9 protein_coding 47767069,47765270,47754528,47752916,47751143,47750916,47746056,47743953,47736616,47734025,47732537,47731374,47724468,47724028,47722976,47719929,47716517 47767301,47765362,47754664,47753102,47751290,47751036,47746394,47744163,47736740,47734129,47732670,47731561,47724778,47724172,47723316,47720086,47717512 Gene ID= ENSG00000109920.12 TPM= 7.24 Transcript Type= protein_coding chr11 47778233 47848350 47778233 47848350 - transcript1962.chr11.nnic@NUP160 transcript1962.chr11.nnic protein_coding 47848219,47847848,47840378,47839843,47837545,47836887,47835651,47822087,47821724,47819374,47818056,47815946,47815479,47813316,47812867,47812302,47812064,47808396,47807070,47806153,47804549,47803438,47801811,47798368,47798168,47797978,47797779,47792786,47791930,47788501,47788182,47786453,47784922,47783073,47780343,47778233 47848350,47847959,47840588,47840065,47837623,47837001,47835809,47822164,47821821,47819458,47818124,47816029,47815649,47813415,47813047,47812429,47812224,47808529,47807140,47806312,47804618,47803536,47801930,47798463,47798262,47798074,47797884,47792946,47791990,47788611,47788305,47786554,47785063,47783198,47780447,47779194 Gene ID= ENSG00000030066.13 TPM= 2.72 Transcript Type= NA chr11 57299534 57322346 57299534 57322346 - transcript1974.chr11.nic@TNKS1BP1 transcript1974.chr11.nic protein_coding 57322237,57321792,57320079,57317818,57312534,57308395,57302459,57302074,57301807,57300884,57300528,57299534 57322346,57321950,57320712,57317887,57313889,57310556,57302825,57302224,57301943,57301041,57300600,57300081 Gene ID= ENSG00000149115.13 TPM= 47.31 Transcript Type= NA chr11 57299620 57311516 57299620 57311516 - transcript1983.chr11.nic@TNKS1BP1 transcript1983.chr11.nic protein_coding 57311238,57308395,57302459,57302074,57301807,57300884,57300528,57299620 57311516,57310556,57302825,57302224,57301943,57301041,57300600,57300081 Gene ID= ENSG00000149115.13 TPM= 31.92 Transcript Type= NA chr11 57299642 57324927 57299642 57324927 - ENST00000358252.7@TNKS1BP1 ENST00000358252.7 protein_coding 57324840,57321792,57320079,57317818,57312534,57308395,57302459,57302074,57301807,57300884,57300528,57299642 57324927,57321950,57320712,57317887,57313889,57310556,57302825,57302224,57301943,57301041,57300600,57300081 Gene ID= ENSG00000149115.13 TPM= 115.98 Transcript Type= protein_coding chr11 57299676 57303479 57299676 57303479 - ENST00000427750.2@TNKS1BP1 ENST00000427750.2 protein_coding 57302459,57302074,57301807,57300884,57300528,57299676 57303479,57302224,57301943,57301041,57300600,57300081 Gene ID= ENSG00000149115.13 TPM= 1.81 Transcript Type= retained_intron chr11 57325983 57335595 57325983 57335595 - transcript1989.chr11.nic@SSRP1 transcript1989.chr11.nic protein_coding 57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327426,57326703,57325983 57335595,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514,57326889,57326478 Gene ID= ENSG00000149136.8 TPM= 5.43 Transcript Type= NA chr11 57325985 57335877 57325985 57335877 - ENST00000278412.6@SSRP1 ENST00000278412.6 protein_coding 57335730,57335068,57334463,57333435,57332959,57332625,57332383,57332152,57331668,57330855,57330291,57330093,57328297,57327712,57327426,57326703,57325985 57335877,57335240,57334648,57333540,57333149,57332855,57332486,57332280,57331889,57330927,57330429,57330138,57328426,57327882,57327514,57326889,57326478 Gene ID= ENSG00000149136.8 TPM= 76.07 Transcript Type= protein_coding chr11 57406955 57427485 57406955 57427485 - transcript1995.chr11.nic@SLC43A3 transcript1995.chr11.nic protein_coding 57427408,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406955 57427485,57426652,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896 Gene ID= ENSG00000134802.17 TPM= 14.39 Transcript Type= NA chr11 57406955 57427171 57406955 57427171 - transcript1999.chr11.nic@SLC43A3 transcript1999.chr11.nic protein_coding 57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406955 57427171,57426652,57426389,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896 Gene ID= ENSG00000134802.17 TPM= 9.41 Transcript Type= NA chr11 57406955 57427171 57406955 57427171 - transcript2004.chr11.nic@SLC43A3 transcript2004.chr11.nic protein_coding 57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406955 57427171,57426652,57426352,57425709,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896 Gene ID= ENSG00000134802.17 TPM= 3.85 Transcript Type= NA chr11 57406956 57427121 57406956 57427121 - ENST00000395124.5@SLC43A3 ENST00000395124.5 protein_coding 57427062,57426588,57425989,57425541,57423982,57421297,57420972,57417748,57416573,57414933,57414615,57409935,57409175,57406956 57427121,57426652,57426352,57425670,57424028,57421373,57421064,57417887,57416670,57415106,57414731,57410121,57409298,57407896 Gene ID= ENSG00000134802.17 TPM= 46.99 Transcript Type= protein_coding chr11 57484533 57515245 57484533 57515245 - transcript2018.chr11.nic@SLC43A1 transcript2018.chr11.nic protein_coding 57515100,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484533 57515245,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242 Gene ID= ENSG00000149150.8 TPM= 3.17 Transcript Type= NA chr11 57484535 57515739 57484535 57515739 - transcript2020.chr11.nic@SLC43A1 transcript2020.chr11.nic protein_coding 57515444,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484535 57515739,57514124,57501374,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242 Gene ID= ENSG00000149150.8 TPM= 2.26 Transcript Type= NA chr11 57484534 57515786 57484534 57515786 - ENST00000278426.7@SLC43A1 ENST00000278426.7 protein_coding 57515444,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484534 57515786,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242 Gene ID= ENSG00000149150.8 TPM= 23.09 Transcript Type= protein_coding chr11 57484536 57514885 57484536 57514885 - ENST00000528450.5@SLC43A1 ENST00000528450.5 protein_coding 57514781,57513958,57501152,57500988,57500779,57497753,57496031,57493993,57491716,57491591,57491224,57489251,57488916,57487095,57484536 57514885,57514124,57501329,57501043,57500855,57497845,57496164,57494171,57491862,57491626,57491362,57489392,57488989,57487218,57485242 Gene ID= ENSG00000149150.8 TPM= 1.36 Transcript Type= protein_coding chr11 57528463 57530765 57528463 57530765 - ENST00000257245.8@TIMM10 ENST00000257245.8 protein_coding 57530658,57530119,57528463 57530765,57530234,57528918 Gene ID= ENSG00000134809.8 TPM= 50.26 Transcript Type= protein_coding chr11 57528641 57530734 57528641 57530734 - ENST00000525158.1@TIMM10 ENST00000525158.1 protein_coding 57530658,57530119,57528641 57530734,57530293,57528918 Gene ID= ENSG00000134809.8 TPM= 5.89 Transcript Type= protein_coding chr11 57551656 57568284 57551656 57568284 - ENST00000340573.8@UBE2L6 ENST00000340573.8 protein_coding 57567849,57560337,57554437,57551656 57568284,57560432,57554623,57552509 Gene ID= ENSG00000156587.15 TPM= 14.49 Transcript Type= protein_coding chr11 57597518 57614853 57597518 57614853 + ENST00000278407.8@SERPING1 ENST00000278407.8 protein_coding 57597518,57598249,57599879,57602035,57606010,57606408,57611717,57614328 57597722,57598321,57600377,57602169,57606213,57606547,57611936,57614853 Gene ID= ENSG00000149131.15 TPM= 141.27 Transcript Type= protein_coding chr11 57598133 57614854 57598133 57614854 + transcript2040.chr11.nic@SERPING1 transcript2040.chr11.nic protein_coding 57598133,57599879,57602035,57606010,57606408,57611717,57614328 57598321,57600377,57602169,57606213,57606547,57611936,57614854 Gene ID= ENSG00000149131.15 TPM= 49.8 Transcript Type= NA chr11 57657158 57661868 57657158 57661868 + ENST00000533682.1@CLP1 ENST00000533682.1 protein_coding 57657158,57659455,57660765 57657860,57660082,57661868 Gene ID= ENSG00000172409.5 TPM= 28.98 Transcript Type= protein_coding chr11 57668070 57701187 57668070 57701187 + transcript2053.chr11.nic@ZDHHC5 transcript2053.chr11.nic protein_coding 57668070,57672021,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866 57668187,57673194,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701187 Gene ID= ENSG00000156599.10 TPM= 6.34 Transcript Type= NA chr11 57667896 57701187 57667896 57701187 + ENST00000287169.7@ZDHHC5 ENST00000287169.7 protein_coding 57667896,57672021,57682422,57688508,57690031,57690335,57692611,57693783,57695920,57696761,57698559,57699866 57668187,57673194,57682543,57688665,57690203,57690437,57692702,57693915,57696043,57696873,57699418,57701187 Gene ID= ENSG00000156599.10 TPM= 73.35 Transcript Type= protein_coding chr11 57703709 57712243 57703709 57712243 - transcript2058.chr11.nic@MED19 transcript2058.chr11.nic protein_coding 57711963,57704973,57704719,57704302,57703709 57712243,57705229,57704815,57704635,57704106 Gene ID= ENSG00000156603.16 TPM= 1.81 Transcript Type= NA chr11 57712607 57740973 57712607 57740973 + ENST00000278422.8@TMX2 ENST00000278422.8 protein_coding 57712607,57737608,57737913,57738354,57738664,57738974,57739131,57740099 57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740973 Gene ID= ENSG00000213593.9 TPM= 40.37 Transcript Type= protein_coding chr11 57712562 57740973 57712562 57740973 + transcript2086.chr11.nic@TMX2 transcript2086.chr11.nic protein_coding 57712562,57737608,57737913,57738664,57738974,57739131,57740099 57712807,57737668,57738026,57738770,57739039,57739260,57740973 Gene ID= ENSG00000213593.9 TPM= 4.3 Transcript Type= NA chr11 57712603 57740973 57712603 57740973 + ENST00000378312.8@TMX2 ENST00000378312.8 protein_coding 57712603,57737608,57738354,57738664,57738974,57739131,57740099 57712807,57737668,57738430,57738770,57739039,57739260,57740973 Gene ID= ENSG00000213593.9 TPM= 8.22 Transcript Type= protein_coding chr11 57712614 57740969 57712614 57740969 + ENST00000529403.1@TMX2 ENST00000529403.1 protein_coding 57712614,57737608,57737836,57738354,57738664,57738974,57739131,57740099 57712807,57737668,57738026,57738430,57738770,57739039,57739260,57740969 Gene ID= ENSG00000213593.9 TPM= 3.24 Transcript Type= nonsense_mediated_decay chr11 57741353 57743038 57741353 57743038 + ENST00000534355.5@SELENOH ENST00000534355.5 protein_coding 57741353,57741809,57742117,57742863 57741717,57741954,57742247,57743038 Gene ID= ENSG00000211450.9 TPM= 215.52 Transcript Type= protein_coding chr11 57741513 57743057 57741513 57743057 + ENST00000533321.1@SELENOH ENST00000533321.1 protein_coding 57741513,57741809 57741717,57743057 Gene ID= ENSG00000211450.9 TPM= 3.62 Transcript Type= retained_intron chr11 57761832 57819179 57761832 57819179 + transcript2061.chr11.nic@CTNND1 transcript2061.chr11.nic protein_coding 57761832,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806461,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762046,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806478,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819179 Gene ID= ENSG00000198561.13 TPM= 3.6 Transcript Type= NA chr11 57761797 57819178 57761797 57819178 + ENST00000361796.9@CTNND1 ENST00000361796.9 protein_coding 57761797,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806461,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762119,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806478,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178 Gene ID= ENSG00000198561.13 TPM= 2.69 Transcript Type= protein_coding chr11 57761797 57819178 57761797 57819178 + ENST00000361332.8@CTNND1 ENST00000361332.8 protein_coding 57761797,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57815915,57816297 57762119,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57816001,57819178 Gene ID= ENSG00000198561.13 TPM= 2.51 Transcript Type= protein_coding chr11 57761797 57819178 57761797 57819178 + ENST00000358694.10@CTNND1 ENST00000358694.10 protein_coding 57761797,57789037,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762046,57789155,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178 Gene ID= ENSG00000198561.13 TPM= 43.24 Transcript Type= protein_coding chr11 57761773 57819179 57761773 57819179 + transcript2070.chr11.nic@CTNND1 transcript2070.chr11.nic protein_coding 57761773,57789037,57791385,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762046,57789155,57791673,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819179 Gene ID= ENSG00000198561.13 TPM= 8.22 Transcript Type= NA chr11 57761797 57819178 57761797 57819178 + ENST00000428599.6@CTNND1 ENST00000428599.6 protein_coding 57761797,57791385,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762046,57791673,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178 Gene ID= ENSG00000198561.13 TPM= 7.02 Transcript Type= protein_coding chr11 57761797 57819178 57761797 57819178 + ENST00000529986.5@CTNND1 ENST00000529986.5 protein_coding 57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762046,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178 Gene ID= ENSG00000198561.13 TPM= 6.11 Transcript Type= protein_coding chr11 57761797 57819178 57761797 57819178 + ENST00000426142.6@CTNND1 ENST00000426142.6 protein_coding 57761797,57794010,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762119,57794081,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178 Gene ID= ENSG00000198561.13 TPM= 4.3 Transcript Type= protein_coding chr11 57761797 57819178 57761797 57819178 + ENST00000532245.5@CTNND1 ENST00000532245.5 protein_coding 57761797,57795577,57796457,57801733,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57762046,57795729,57796992,57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819178 Gene ID= ENSG00000198561.13 TPM= 5.21 Transcript Type= protein_coding chr11 57800006 57819179 57800006 57819179 + transcript2078.chr11.nic@CTNND1 transcript2078.chr11.nic protein_coding 57800006,57803621,57804663,57805882,57806915,57808165,57808390,57809274,57810109,57811399,57814311,57815394,57816297 57802196,57803804,57804780,57806035,57806983,57808292,57808540,57809466,57810223,57811486,57814373,57815500,57819179 Gene ID= ENSG00000198561.13 TPM= 9.78 Transcript Type= NA chr11 58526871 58575861 58526871 58575861 - ENST00000395074.6@LPXN ENST00000395074.6 protein_coding 58575760,58570556,58564155,58554841,58551065,58549973,58549786,58528043,58526871 58575861,58570713,58564201,58554940,58551232,58550146,58549867,58528191,58527723 Gene ID= ENSG00000110031.12 TPM= 5.89 Transcript Type= protein_coding chr11 58526871 58578166 58526871 58578166 - ENST00000528954.5@LPXN ENST00000528954.5 protein_coding 58578019,58570556,58564155,58554841,58551065,58549973,58549786,58528043,58526871 58578166,58570713,58564201,58554940,58551232,58550146,58549867,58528191,58527723 Gene ID= ENSG00000110031.12 TPM= 3.17 Transcript Type= protein_coding chr11 58579111 58621042 58579111 58621042 + ENST00000316059.6@ZFP91 ENST00000316059.6 protein_coding 58579111,58584856,58609830,58610298,58610950,58611604,58612278,58612762,58614229,58616716,58617196 58579622,58584884,58610039,58610334,58611054,58611738,58612328,58612840,58614343,58616815,58621042 Gene ID= ENSG00000186660.14 TPM= 19.92 Transcript Type= protein_coding chr11 59172492 59208587 59172492 59208587 + ENST00000227451.3@DTX4 ENST00000227451.3 protein_coding 59172492,59181739,59188735,59189162,59191114,59192098,59195208,59199684,59204676 59172806,59182462,59188796,59189323,59191175,59192250,59195369,59199773,59208587 Gene ID= ENSG00000110042.7 TPM= 4.53 Transcript Type= protein_coding chr11 59574398 59616144 59574398 59616144 - ENST00000263847.5@OSBP ENST00000263847.5 protein_coding 59615303,59610381,59608484,59601640,59601283,59600819,59600496,59594010,59593604,59581451,59580174,59578149,59576805,59574398 59616144,59610589,59608734,59601838,59601385,59600873,59600627,59594255,59593724,59581554,59580269,59578330,59577025,59576719 Gene ID= ENSG00000110048.11 TPM= 186.54 Transcript Type= protein_coding chr11 59636722 59669017 59636722 59669017 - transcript2117.chr11.nnic@PATL1 transcript2117.chr11.nnic protein_coding 59668881,59666853,59659252,59658866,59657530,59656499,59655523,59653983,59652838,59652464,59651544,59650754,59649462,59647754,59642880,59639292,59639048,59636722 59669017,59666964,59659469,59658946,59657724,59656600,59655740,59654072,59653018,59652587,59651641,59650813,59649610,59647913,59643035,59639383,59639197,59638411 Gene ID= ENSG00000166889.13 TPM= 1.81 Transcript Type= NA chr11 59636716 59668980 59636716 59668980 - ENST00000300146.9@PATL1 ENST00000300146.9 protein_coding 59668881,59666853,59659252,59658866,59657530,59656499,59655956,59655523,59653983,59652838,59652464,59651544,59650754,59649462,59647754,59642880,59639292,59639048,59636716 59668980,59666964,59659469,59658946,59657724,59656600,59656045,59655740,59654072,59653018,59652587,59651641,59650813,59649610,59647913,59643035,59639383,59639197,59638411 Gene ID= ENSG00000166889.13 TPM= 6.34 Transcript Type= protein_coding chr11 59755358 59805877 59755358 59805877 + transcript2118.chr11.nnic@STX3 transcript2118.chr11.nnic protein_coding 59755358,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59803218,59803840 59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59803300,59805877 Gene ID= ENSG00000166900.16 TPM= 1.99 Transcript Type= NA chr11 59755358 59799933 59755358 59799933 + transcript2119.chr11.nic@STX3 transcript2119.chr11.nic protein_coding 59755358,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59799675 59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59799933 Gene ID= ENSG00000166900.16 TPM= 1.99 Transcript Type= NA chr11 59755358 59802702 59755358 59802702 + transcript2120.chr11.nnic@STX3 transcript2120.chr11.nnic protein_coding 59755358,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59800778 59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59802702 Gene ID= ENSG00000166900.16 TPM= 2.29 Transcript Type= NA chr11 59755059 59802706 59755059 59802706 + ENST00000337979.8@STX3 ENST00000337979.8 protein_coding 59755059,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59795372,59797283,59800855 59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59795482,59797396,59802706 Gene ID= ENSG00000166900.16 TPM= 54.81 Transcript Type= protein_coding chr11 59755358 59802704 59755358 59802704 + transcript2124.chr11.nic@STX3 transcript2124.chr11.nic protein_coding 59755358,59773211,59787037,59788873,59790519,59792107,59793099,59793380,59797283,59800855 59755635,59773294,59787136,59788947,59790586,59792215,59793172,59793514,59797396,59802704 Gene ID= ENSG00000166900.16 TPM= 2.29 Transcript Type= NA chr11 59806135 59810872 59806135 59810872 - ENST00000300151.4@MRPL16 ENST00000300151.4 protein_coding 59810604,59809855,59807701,59806135 59810872,59809920,59807849,59806832 Gene ID= ENSG00000166902.4 TPM= 105.95 Transcript Type= protein_coding chr11 60171606 60184666 60171606 60184666 - transcript2136.chr11.nic@MS4A6A transcript2136.chr11.nic protein_coding 60184320,60182978,60181581,60179831,60178260,60175402,60173028,60171606 60184666,60183331,60181741,60179965,60178316,60175611,60173129,60172253 Gene ID= ENSG00000110077.14 TPM= 45.73 Transcript Type= NA chr11 60171606 60184436 60171606 60184436 - transcript2139.chr11.nic@MS4A6A transcript2139.chr11.nic protein_coding 60184273,60182978,60181581,60179831,60178260,60175402,60171606 60184436,60183331,60181741,60179965,60178316,60175611,60173129 Gene ID= ENSG00000110077.14 TPM= 8.15 Transcript Type= NA chr11 60172500 60184494 60172500 60184494 - transcript2142.chr11.nic@MS4A6A transcript2142.chr11.nic protein_coding 60184273,60183136,60181581,60179831,60178260,60175402,60172500 60184494,60183331,60181741,60179965,60178316,60175611,60173129 Gene ID= ENSG00000110077.14 TPM= 4.53 Transcript Type= NA chr11 60172015 60183040 60172015 60183040 - ENST00000420732.6@MS4A6A ENST00000420732.6 protein_coding 60182978,60181581,60179831,60178260,60175506,60173028,60172015 60183040,60181741,60179965,60178316,60175611,60173129,60172253 Gene ID= ENSG00000110077.14 TPM= 1.81 Transcript Type= protein_coding chr11 60172014 60183104 60172014 60183104 - ENST00000528851.5@MS4A6A ENST00000528851.5 protein_coding 60182978,60181581,60179831,60178260,60175402,60172014 60183104,60181741,60179965,60178316,60175611,60173129 Gene ID= ENSG00000110077.14 TPM= 30.79 Transcript Type= protein_coding chr11 60280586 60308972 60280586 60308972 + ENST00000337908.4@MS4A4A ENST00000337908.4 protein_coding 60280586,60292225,60297197,60301001,60302559,60306100,60308107 60280716,60292384,60297325,60301057,60302717,60306201,60308972 Gene ID= ENSG00000110079.16 TPM= 32.6 Transcript Type= protein_coding chr11 60378485 60395951 60378485 60395951 + ENST00000358246.5@MS4A7 ENST00000358246.5 protein_coding 60378485,60383129,60386717,60389390,60392685,60393787 60378664,60383288,60386773,60389596,60392786,60395951 Gene ID= ENSG00000166927.12 TPM= 22.64 Transcript Type= protein_coding chr11 60842071 60851081 60842071 60851081 + ENST00000227520.9@CCDC86 ENST00000227520.9 protein_coding 60842071,60847924,60849940,60850206 60842882,60848053,60850014,60851081 Gene ID= ENSG00000110104.11 TPM= 75.16 Transcript Type= protein_coding chr11 60890730 60906588 60890730 60906588 - ENST00000227524.8@PRPF19 ENST00000227524.8 protein_coding 60906364,60903712,60903459,60902740,60902583,60902403,60901499,60901295,60900854,60900582,60899149,60898862,60898541,60898101,60897846,60890730 60906588,60903861,60903535,60902881,60902656,60902465,60901540,60901369,60900929,60900691,60899304,60898931,60898626,60898271,60897951,60891263 Gene ID= ENSG00000110107.8 TPM= 4.53 Transcript Type= protein_coding chr11 60913874 60923443 60913874 60923443 + ENST00000227525.7@TMEM109 ENST00000227525.7 protein_coding 60913874,60919686,60920886,60921774 60914268,60919930,60920988,60923443 Gene ID= ENSG00000110108.9 TPM= 220.95 Transcript Type= protein_coding chr11 60924432 60937158 60924432 60937158 + transcript2179.chr11.nic@TMEM132A transcript2179.chr11.nic protein_coding 60924432,60927204,60927641,60928629,60930510,60931686,60931984,60933542,60934488,60935252 60924733,60927418,60927859,60928960,60930659,60931884,60932127,60933744,60934764,60937158 Gene ID= ENSG00000006118.14 TPM= 10.41 Transcript Type= NA chr11 60924481 60937159 60924481 60937159 + ENST00000005286.8@TMEM132A ENST00000005286.8 protein_coding 60924481,60927204,60927641,60928629,60930510,60931686,60931984,60933542,60934488,60935252,60935864 60924733,60927418,60927859,60928960,60930659,60931884,60932127,60933744,60934764,60935443,60937159 Gene ID= ENSG00000006118.14 TPM= 131.76 Transcript Type= protein_coding chr11 60937084 60951785 60937084 60951785 - ENST00000227880.7@SLC15A3 ENST00000227880.7 protein_coding 60950994,60946532,60943689,60942035,60941122,60939480,60937870,60937084 60951785,60946821,60943836,60942145,60941290,60939638,60938025,60937373 Gene ID= ENSG00000110446.10 TPM= 2.72 Transcript Type= protein_coding chr11 61130256 61161617 61130256 61161617 - ENST00000301765.9@VPS37C ENST00000301765.9 protein_coding 61161391,61138737,61134036,61133255,61130256 61161617,61138835,61134207,61133337,61132539 Gene ID= ENSG00000167987.10 TPM= 11.77 Transcript Type= protein_coding chr11 61203380 61213098 61203380 61213098 + ENST00000325558.10@PGA3 ENST00000325558.10 protein_coding 61203380,61204107,61206510,61207497,61208291,61209842,61211090,61211337,61212553 61203620,61204269,61206627,61207615,61208490,61209958,61211234,61211435,61213098 Gene ID= ENSG00000229859.9 TPM= 1.81 Transcript Type= protein_coding chr11 61269465 61295318 61269465 61295318 - transcript2230.chr11.nic@VWCE transcript2230.chr11.nic protein_coding 61294928,61291482,61291264,61290799,61286314,61282789,61281786,61280793,61280624,61278394,61276593,61274499,61273199,61269465 61295318,61291576,61291353,61290927,61286430,61282905,61281914,61281235,61280717,61278476,61276680,61274584,61273316,61271760 Gene ID= ENSG00000167992.12 TPM= 1.81 Transcript Type= NA chr11 61299451 61333366 61299451 61333366 - ENST00000301764.11@DDB1 ENST00000301764.11 protein_coding 61332908,61331543,61329958,61329363,61326779,61325611,61323979,61323011,61322296,61321595,61316492,61316285,61314308,61314047,61313862,61313499,61311989,61311784,61310295,61309796,61308983,61303865,61303046,61302582,61302257,61300809,61299451 61333366,61331691,61330074,61329584,61326893,61325708,61324137,61323094,61322412,61321697,61316567,61316393,61314486,61314210,61313969,61313706,61312084,61311895,61310418,61309960,61309077,61304035,61303155,61302751,61302359,61300932,61300219 Gene ID= ENSG00000167986.13 TPM= 1073.07 Transcript Type= protein_coding chr11 61345314 61346890 61345314 61346890 + ENST00000525366.5@TKFC ENST00000525366.5 protein_coding 61345314,61345712,61345857,61346351 61345565,61345745,61345946,61346890 Gene ID= ENSG00000149476.15 TPM= 1.81 Transcript Type= retained_intron chr11 61348745 61362299 61348745 61362299 - ENST00000294072.8@CYB561A3 ENST00000294072.8 protein_coding 61361733,61357733,61356530,61353784,61352985,61350991,61348745 61362299,61357828,61356728,61353992,61353139,61351147,61350422 Gene ID= ENSG00000162144.9 TPM= 3591.3 Transcript Type= protein_coding chr11 61348754 61362283 61348754 61362283 - ENST00000426130.6@CYB561A3 ENST00000426130.6 protein_coding 61361733,61357733,61357203,61356530,61353784,61352985,61350991,61348754 61362283,61357828,61357371,61356728,61353992,61353139,61351147,61350422 Gene ID= ENSG00000162144.9 TPM= 37.04 Transcript Type= protein_coding chr11 61348838 61361913 61348838 61361913 - ENST00000447532.6@CYB561A3 ENST00000447532.6 protein_coding 61361733,61357733,61356530,61353784,61352985,61350991,61348838 61361913,61357828,61356728,61353992,61353139,61351147,61349643 Gene ID= ENSG00000162144.9 TPM= 40.75 Transcript Type= protein_coding chr11 61362372 61369209 61362372 61369209 + transcript2311.chr11.nic@TMEM138 transcript2311.chr11.nic protein_coding 61362372,61364252,61364433,61366045,61367923,61368597 61362420,61364315,61364518,61366216,61367998,61369209 Gene ID= ENSG00000149483.11 TPM= 9.35 Transcript Type= NA chr11 61362368 61369208 61362368 61369208 + transcript2321.chr11.nic@TMEM138 transcript2321.chr11.nic protein_coding 61362368,61364252,61366045,61367923,61368252 61362420,61364518,61366216,61367998,61369208 Gene ID= ENSG00000149483.11 TPM= 4.53 Transcript Type= NA chr11 61362374 61369206 61362374 61369206 + transcript2324.chr11.nic@TMEM138 transcript2324.chr11.nic protein_coding 61362374,61364252,61366045,61367923,61368772 61362420,61364518,61366216,61367998,61369206 Gene ID= ENSG00000149483.11 TPM= 2.72 Transcript Type= NA chr11 61362418 61369209 61362418 61369209 + transcript2325.chr11.nnic@TMEM138 transcript2325.chr11.nnic protein_coding 61362418,61364252,61366045,61367923,61368597 61363868,61364518,61366216,61367998,61369209 Gene ID= ENSG00000149483.11 TPM= 7.54 Transcript Type= NA chr11 61362382 61369209 61362382 61369209 + transcript2329.chr11.nic@TMEM138 transcript2329.chr11.nic protein_coding 61362382,61364252,61366045,61368597 61362420,61364518,61367998,61369209 Gene ID= ENSG00000149483.11 TPM= 2.72 Transcript Type= NA chr11 61392360 61398863 61392360 61398863 + ENST00000334888.9@TMEM216 ENST00000334888.9 protein_coding 61392360,61393231,61393884,61397774,61398261 61392665,61393332,61393976,61397975,61398863 Gene ID= ENSG00000187049.9 TPM= 1.81 Transcript Type= protein_coding chr11 61391687 61398851 61391687 61398851 + ENST00000515837.6@TMEM216 ENST00000515837.6 protein_coding 61391687,61393231,61393884,61397774,61398270 61392665,61393332,61393976,61397975,61398851 Gene ID= ENSG00000187049.9 TPM= 5.43 Transcript Type= protein_coding chr11 61402649 61429994 61402649 61429994 - transcript2340.chr11.nic@CPSF7 transcript2340.chr11.nic protein_coding 61429914,61429182,61421390,61421054,61420470,61419949,61416105,61415666,61411769,61410938,61402649 61429994,61429290,61421608,61421130,61420573,61420094,61416519,61415784,61411937,61411105,61404704 Gene ID= ENSG00000149532.15 TPM= 3.17 Transcript Type= NA chr11 61402649 61430031 61402649 61430031 - ENST00000394888.8@CPSF7 ENST00000394888.8 protein_coding 61429914,61429182,61421390,61420470,61419922,61416105,61415666,61411769,61410938,61402649 61430031,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704 Gene ID= ENSG00000149532.15 TPM= 11.32 Transcript Type= protein_coding chr11 61402731 61430014 61402731 61430014 - ENST00000439958.7@CPSF7 ENST00000439958.7 protein_coding 61429914,61429182,61421390,61420470,61419949,61416105,61415666,61411769,61410938,61402731 61430014,61429290,61421608,61420573,61420094,61416519,61415784,61411937,61411105,61404704 Gene ID= ENSG00000149532.15 TPM= 10.87 Transcript Type= protein_coding chr11 61430051 61473981 61430051 61473981 + transcript2352.chr11.nnic@AP003108.2 transcript2352.chr11.nnic protein_coding 61430051,61437625,61438004,61445941,61472745 61430182,61437848,61438113,61446113,61473981 Gene ID= ENSG00000256591.5 TPM= 4.53 Transcript Type= NA chr11 61430051 61473531 61430051 61473531 + transcript2353.chr11.nnic@AP003108.2 transcript2353.chr11.nnic protein_coding 61430051,61437625,61438004,61468664,61472745 61430182,61437848,61438113,61468714,61473531 Gene ID= ENSG00000256591.5 TPM= 1.81 Transcript Type= NA chr11 61430124 61473532 61430124 61473532 + transcript2357.chr11.nnic@AP003108.2 transcript2357.chr11.nnic protein_coding 61430124,61437625,61438004,61472745 61430182,61437848,61438113,61473532 Gene ID= ENSG00000256591.5 TPM= 1.81 Transcript Type= NA chr11 61430105 61446697 61430105 61446697 + ENST00000542074.1@SDHAF2 ENST00000542074.1 protein_coding 61430105,61445941 61430182,61446697 Gene ID= ENSG00000167985.6 TPM= 15.39 Transcript Type= protein_coding chr11 61755389 61788517 61755389 61788517 + ENST00000265460.9@MYRF ENST00000265460.9 protein_coding 61755389,61765625,61765958,61769260,61770246,61771500,61771829,61773967,61776056,61776322,61776787,61777264,61777734,61778380,61779263,61779498,61779842,61780222,61780957,61781138,61781573,61783513,61783851,61784280,61785800,61786063 61755442,61765712,61766221,61769321,61770525,61771750,61771952,61774162,61776132,61776432,61776877,61777464,61777845,61778489,61779423,61779570,61779930,61780290,61781045,61781329,61781824,61783600,61783925,61784385,61785874,61788517 Gene ID= ENSG00000124920.13 TPM= 1.81 Transcript Type= protein_coding chr11 61789130 61792594 61789130 61792594 - ENST00000545210.5@TMEM258 ENST00000545210.5 protein_coding 61792556,61790375,61789785,61789130 61792594,61790602,61789990,61789235 Gene ID= ENSG00000134825.15 TPM= 4.68 Transcript Type= nonsense_mediated_decay chr11 61789130 61792601 61789130 61792601 - ENST00000257262.12@TMEM258 ENST00000257262.12 protein_coding 61792556,61790493,61789716,61789130 61792601,61790602,61789921,61789235 Gene ID= ENSG00000134825.15 TPM= 3.32 Transcript Type= nonsense_mediated_decay chr11 61789130 61792580 61789130 61792580 - ENST00000541893.5@TMEM258 ENST00000541893.5 protein_coding 61792556,61790423,61789785,61789130 61792580,61790602,61789990,61789235 Gene ID= ENSG00000134825.15 TPM= 2.87 Transcript Type= nonsense_mediated_decay chr11 61792911 61797235 61792911 61797235 + transcript2424.chr11.nic@FEN1 transcript2424.chr11.nic protein_coding 61792911,61795341,61796922 61793028,61796396,61797235 Gene ID= ENSG00000168496.3 TPM= 2.26 Transcript Type= NA chr11 61792637 61797244 61792637 61797244 + ENST00000305885.2@FEN1 ENST00000305885.2 protein_coding 61792637,61795341 61793028,61797244 Gene ID= ENSG00000168496.3 TPM= 27.62 Transcript Type= protein_coding chr11 61827761 61867354 61827761 61867354 + ENST00000278840.8@FADS2 ENST00000278840.8 protein_coding 61827761,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707,61865152,61865638 61828597,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61863786,61865277,61867354 Gene ID= ENSG00000134824.13 TPM= 288.66 Transcript Type= protein_coding chr11 61828186 61850076 61828186 61850076 + transcript2407.chr11.nnic@FADS2 transcript2407.chr11.nnic protein_coding 61828186,61837778,61840334,61840624,61848159,61849749 61828597,61837888,61840531,61840725,61848284,61850076 Gene ID= ENSG00000134824.13 TPM= 11.77 Transcript Type= NA chr11 61816256 61867354 61816256 61867354 + ENST00000257261.10@FADS2 ENST00000257261.10 protein_coding 61816256,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707,61865152,61865638 61816426,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61863786,61865277,61867354 Gene ID= ENSG00000134824.13 TPM= 103.02 Transcript Type= protein_coding chr11 61828280 61864221 61828280 61864221 + ENST00000521849.5@FADS2 ENST00000521849.5 protein_coding 61828280,61837778,61840334,61840624,61848159,61857011,61857454,61862972,61863282,61863707 61828597,61837888,61840531,61840725,61848284,61857071,61857530,61863069,61863378,61864221 Gene ID= ENSG00000134824.13 TPM= 7.24 Transcript Type= protein_coding chr11 61798793 61829323 61798793 61829323 - transcript2364.chr11.nic@FADS1 transcript2364.chr11.nic protein_coding 61829201,61828450,61813243,61812471,61810974,61810751,61806664,61804685,61803670,61803363,61803032,61802801,61798793 61829323,61828708,61813353,61812668,61811075,61810879,61806724,61804761,61803767,61803459,61803111,61802926,61802462 Gene ID= ENSG00000149485.18 TPM= 13.13 Transcript Type= NA chr11 61873515 61891710 61873515 61891710 - transcript2438.chr11.nic@FADS3 transcript2438.chr11.nic protein_coding 61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876359,61876111,61875851,61873515 61891710,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876190,61875976,61873865 Gene ID= ENSG00000221968.8 TPM= 48.54 Transcript Type= NA chr11 61873515 61891604 61873515 61891604 - transcript2441.chr11.nic@FADS3 transcript2441.chr11.nic protein_coding 61891169,61880041,61879312,61878746,61878512,61878155,61876359,61876111,61875851,61873515 61891604,61880151,61879509,61878847,61878634,61878215,61877587,61876190,61875976,61873865 Gene ID= ENSG00000221968.8 TPM= 35.56 Transcript Type= NA chr11 61873526 61891534 61873526 61891534 - ENST00000278829.6@FADS3 ENST00000278829.6 protein_coding 61891169,61880041,61879312,61878746,61878512,61878155,61877511,61876866,61876359,61876111,61875851,61873526 61891534,61880151,61879509,61878847,61878634,61878215,61877587,61876963,61876455,61876190,61875976,61873865 Gene ID= ENSG00000221968.8 TPM= 150.86 Transcript Type= protein_coding chr11 61897302 61917923 61897302 61917923 - transcript2449.chr11.nnic@RAB3IL1 transcript2449.chr11.nnic protein_coding 61917825,61908054,61907565,61907393,61906466,61904754,61904546,61902442,61899314,61897302 61917923,61908306,61907660,61907470,61906684,61904882,61904658,61902541,61899380,61898360 Gene ID= ENSG00000167994.11 TPM= 3.17 Transcript Type= NA chr11 61897301 61917525 61897301 61917525 - ENST00000394836.6@RAB3IL1 ENST00000394836.6 protein_coding 61917357,61908054,61907565,61907393,61906466,61904754,61904546,61902442,61899314,61897301 61917525,61908306,61907660,61907470,61906684,61904882,61904658,61902541,61899380,61898360 Gene ID= ENSG00000167994.11 TPM= 23.09 Transcript Type= protein_coding chr11 61964566 61967633 61964566 61967633 - ENST00000534180.1@FTH1 ENST00000534180.1 protein_coding 61967312,61965369,61964987,61964566 61967633,61965577,61965112,61964891 Gene ID= ENSG00000167996.15 TPM= 15.39 Transcript Type= nonsense_mediated_decay chr11 61964566 61967631 61964566 61967631 - ENST00000532829.5@FTH1 ENST00000532829.5 protein_coding 61967312,61965369,61964987,61964566 61967631,61965515,61965105,61964891 Gene ID= ENSG00000167996.15 TPM= 19.02 Transcript Type= nonsense_mediated_decay chr11 61964566 61967631 61964566 61967631 - ENST00000620041.4@FTH1 ENST00000620041.4 protein_coding 61967548,61967312,61965369,61964987,61964566 61967631,61967453,61965515,61965112,61964891 Gene ID= ENSG00000167996.15 TPM= 70.63 Transcript Type= protein_coding chr11 62337453 62393406 62337453 62393406 + ENST00000301776.9@ASRGL1 ENST00000301776.9 protein_coding 62337453,62337967,62356325,62356987,62389133,62391522,62392079 62337574,62338167,62356467,62357144,62389251,62391632,62393406 Gene ID= ENSG00000162174.12 TPM= 7.7 Transcript Type= protein_coding chr11 62337495 62357201 62337495 62357201 + ENST00000534571.5@ASRGL1 ENST00000534571.5 protein_coding 62337495,62337967,62356325,62356987 62337574,62338167,62356467,62357201 Gene ID= ENSG00000162174.12 TPM= 2.72 Transcript Type= protein_coding chr11 62337448 62393412 62337448 62393412 + ENST00000415229.6@ASRGL1 ENST00000415229.6 protein_coding 62337448,62337890,62356325,62356987,62389133,62391522,62392079 62337574,62338167,62356467,62357144,62389251,62391632,62393412 Gene ID= ENSG00000162174.12 TPM= 2.26 Transcript Type= protein_coding chr11 62515905 62546835 62515905 62546835 - ENST00000378024.8@AHNAK ENST00000378024.8 protein_coding 62546660,62536469,62535945,62535003,62515905 62546835,62536567,62536098,62535190,62534074 Gene ID= ENSG00000124942.13 TPM= 10.87 Transcript Type= protein_coding chr11 62433546 62546796 62433546 62546796 - ENST00000257247.11@AHNAK ENST00000257247.11 protein_coding 62546660,62536469,62535945,62535003,62491732,62433546 62546796,62536567,62536098,62535190,62491831,62433891 Gene ID= ENSG00000124942.13 TPM= 5.43 Transcript Type= protein_coding chr11 62559601 62573973 62559601 62573973 - ENST00000329251.4@EEF1G ENST00000329251.4 protein_coding 62573831,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559601 62573973,62572742,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837 Gene ID= ENSG00000254772.9 TPM= 1366.31 Transcript Type= protein_coding chr11 62559603 62577321 62559603 62577321 - ENST00000526409.5@AP002990.1 ENST00000526409.5 protein_coding 62577182,62576907,62576657,62574677,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559603 62577321,62577017,62576749,62574908,62572742,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837 Gene ID= ENSG00000255508.7 TPM= 27.01 Transcript Type= retained_intron chr11 62559603 62591531 62559603 62591531 - ENST00000496634.2@AP002990.1 ENST00000496634.2 protein_coding 62591404,62589031,62581386,62581106,62578561,62577182,62576907,62576657,62572584,62571838,62571540,62570965,62567399,62566806,62560282,62560069,62559603 62591531,62589221,62581701,62581206,62579030,62577291,62577017,62576749,62574908,62571901,62571682,62571108,62567528,62567010,62560454,62560193,62559837 Gene ID= ENSG00000255508.7 TPM= 23.09 Transcript Type= nonsense_mediated_decay chr11 62593214 62601840 62593214 62601840 - ENST00000278823.6@MTA2 ENST00000278823.6 protein_coding 62601423,62600622,62600166,62598522,62598327,62598024,62597610,62597316,62596637,62596458,62596279,62596010,62595752,62595264,62594981,62594516,62594259,62593214 62601840,62600689,62600259,62598639,62598390,62598141,62597712,62597415,62596825,62596532,62596337,62596107,62595891,62595492,62595070,62594634,62594407,62594040 Gene ID= ENSG00000149480.6 TPM= 15.39 Transcript Type= protein_coding chr11 62602218 62612765 62602218 62612765 - ENST00000394773.6@EML3 ENST00000394773.6 protein_coding 62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602218 62612765,62611596,62611344,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678 Gene ID= ENSG00000149499.11 TPM= 53.43 Transcript Type= protein_coding chr11 62602219 62612524 62602219 62612524 - ENST00000278845.8@EML3 ENST00000278845.8 protein_coding 62612436,62611425,62611087,62610879,62609629,62609354,62608962,62608736,62608542,62608201,62607666,62606958,62606063,62605855,62605642,62605113,62604113,62603944,62603729,62603149,62602759,62602219 62612524,62611596,62611347,62610992,62609696,62609477,62609132,62608805,62608652,62608296,62607821,62607099,62606214,62605980,62605773,62605180,62604201,62604041,62603816,62603247,62602889,62602678 Gene ID= ENSG00000149499.11 TPM= 6.34 Transcript Type= protein_coding chr11 62615296 62622175 62615296 62622175 - ENST00000265471.9@B3GAT3 ENST00000265471.9 protein_coding 62621866,62620497,62616987,62616506,62615296 62622175,62620671,62617347,62616796,62615799 Gene ID= ENSG00000149541.9 TPM= 67.01 Transcript Type= protein_coding chr11 62624830 62646613 62624830 62646613 - transcript2508.chr11.nic@GANAB transcript2508.chr11.nic protein_coding 62646562,62639930,62639627,62639359,62638983,62634821,62633445,62633184,62633005,62632565,62631030,62630601,62630379,62630197,62629814,62629588,62629194,62628769,62627289,62627048,62626860,62626571,62626335,62626065,62624830 62646613,62640066,62639731,62639467,62639110,62635000,62633514,62633271,62633101,62632745,62631183,62630836,62630505,62630276,62629957,62629684,62629295,62629012,62627353,62627124,62626934,62626684,62626447,62626165,62625924 Gene ID= ENSG00000089597.16 TPM= 24.15 Transcript Type= NA chr11 62634482 62640228 62634482 62640228 - transcript2513.chr11.nic@GANAB transcript2513.chr11.nic protein_coding 62639627,62639359,62638983,62634482 62640228,62639467,62639110,62635000 Gene ID= ENSG00000089597.16 TPM= 2.72 Transcript Type= NA chr11 62624826 62646615 62624826 62646615 - ENST00000346178.8@GANAB ENST00000346178.8 protein_coding 62646562,62639627,62639359,62638983,62634821,62634310,62633445,62633184,62633005,62632565,62631030,62630601,62630379,62630197,62629814,62629588,62629194,62628769,62627289,62627048,62626860,62626571,62626335,62626065,62624826 62646615,62639731,62639467,62639110,62635000,62634375,62633514,62633271,62633101,62632745,62631183,62630836,62630505,62630276,62629957,62629684,62629295,62629012,62627353,62627124,62626934,62626684,62626447,62626165,62625924 Gene ID= ENSG00000089597.16 TPM= 37.73 Transcript Type= protein_coding chr11 62625059 62646616 62625059 62646616 - ENST00000356638.7@GANAB ENST00000356638.7 protein_coding 62646562,62639627,62639359,62638983,62634821,62633445,62633184,62633005,62632565,62631030,62630601,62630379,62630197,62629814,62629588,62629194,62628769,62627289,62627048,62626860,62626571,62626335,62626065,62625059 62646616,62639731,62639467,62639110,62635000,62633514,62633271,62633101,62632745,62631183,62630836,62630505,62630276,62629957,62629684,62629295,62629012,62627353,62627124,62626934,62626684,62626447,62626165,62625924 Gene ID= ENSG00000089597.16 TPM= 2.42 Transcript Type= protein_coding chr11 62646857 62653327 62646857 62653327 - transcript2514.chr11.nnic@INTS5 transcript2514.chr11.nnic protein_coding 62653170,62647164,62646857 62653327,62649999,62647041 Gene ID= ENSG00000185085.2 TPM= 1.81 Transcript Type= NA chr11 62646848 62653302 62646848 62653302 - ENST00000330574.2@INTS5 ENST00000330574.2 protein_coding 62653170,62646848 62653302,62649999 Gene ID= ENSG00000185085.2 TPM= 84.22 Transcript Type= protein_coding chr11 62662816 62665217 62662816 62665217 - ENST00000524958.5@C11orf98 ENST00000524958.5 protein_coding 62665131,62664849,62663236,62662816 62665217,62664973,62663333,62663159 Gene ID= ENSG00000278615.4 TPM= 38.49 Transcript Type= protein_coding chr11 62662817 62665181 62662817 62665181 - ENST00000532786.2@C11orf98 ENST00000532786.2 protein_coding 62664849,62663236,62662817 62665181,62663333,62663159 Gene ID= ENSG00000278615.4 TPM= 4.07 Transcript Type= retained_intron chr11 62662817 62671835 62662817 62671835 - transcript2517.chr11.nic@LBHD1 transcript2517.chr11.nic protein_coding 62671240,62669882,62669641,62667523,62664849,62663236,62662817 62671835,62670015,62669803,62667747,62664973,62663333,62663159 Gene ID= ENSG00000162194.12 TPM= 1.81 Transcript Type= NA chr11 62662817 62672299 62662817 62672299 - transcript2519.chr11.nic@LBHD1 transcript2519.chr11.nic protein_coding 62669882,62669641,62667523,62664849,62663236,62662817 62672299,62669803,62667747,62664973,62663333,62663159 Gene ID= ENSG00000162194.12 TPM= 3.62 Transcript Type= NA chr11 62665309 62667397 62665309 62667397 + ENST00000398922.6@METTL12 ENST00000398922.6 protein_coding 62665309,62665647,62666354 62665332,62665946,62667397 Gene ID= ENSG00000214756.7 TPM= 12.68 Transcript Type= processed_transcript chr11 62665313 62668496 62665313 62668496 + ENST00000529868.1@METTL12 ENST00000529868.1 protein_coding 62665313,62665647 62665332,62668496 Gene ID= ENSG00000214756.7 TPM= 6.34 Transcript Type= retained_intron chr11 62665309 62668108 62665309 62668108 + ENST00000532971.1@METTL12 ENST00000532971.1 protein_coding 62665309,62665647,62666396 62665332,62665946,62668108 Gene ID= ENSG00000214756.7 TPM= 12.68 Transcript Type= protein_coding chr11 62671654 62673687 62671654 62673687 + ENST00000377953.3@UQCC3 ENST00000377953.3 protein_coding 62671654,62671953 62671865,62673687 Gene ID= ENSG00000204922.4 TPM= 45.28 Transcript Type= protein_coding chr11 62676498 62679090 62676498 62679090 - ENST00000301935.9@UBXN1 ENST00000301935.9 protein_coding 62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676813,62676498 62679090,62678743,62678601,62678408,62678118,62677832,62677634,62677005,62676639 Gene ID= ENSG00000162191.13 TPM= 170.24 Transcript Type= protein_coding chr11 62676498 62679058 62676498 62679058 - ENST00000532904.5@UBXN1 ENST00000532904.5 protein_coding 62678690,62678495,62678339,62677927,62676498 62679058,62678601,62678408,62678118,62677832 Gene ID= ENSG00000162191.13 TPM= 1.81 Transcript Type= retained_intron chr11 62676498 62679055 62676498 62679055 - ENST00000294119.6@UBXN1 ENST00000294119.6 protein_coding 62678865,62678690,62678495,62678339,62677927,62677781,62677518,62676498 62679055,62678743,62678601,62678408,62678118,62677832,62677634,62677005 Gene ID= ENSG00000162191.13 TPM= 1.81 Transcript Type= protein_coding chr11 62686402 62689899 62686402 62689899 - ENST00000317449.4@LRRN4CL ENST00000317449.4 protein_coding 62689427,62686402 62689899,62688513 Gene ID= ENSG00000177363.4 TPM= 2.72 Transcript Type= protein_coding chr11 62690295 62706344 62690295 62706344 - ENST00000407022.7@BSCL2 ENST00000407022.7 protein_coding 62706203,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690295 62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521 Gene ID= ENSG00000168000.14 TPM= 77.88 Transcript Type= protein_coding chr11 62690275 62709514 62690275 62709514 - ENST00000405837.5@BSCL2 ENST00000405837.5 protein_coding 62709147,62707109,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690275 62709514,62707324,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690873,62690692,62690521 Gene ID= ENSG00000168000.14 TPM= 39.84 Transcript Type= protein_coding chr11 62690315 62706344 62690315 62706344 - ENST00000421906.5@BSCL2 ENST00000421906.5 protein_coding 62706259,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690315 62706344,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521 Gene ID= ENSG00000168000.14 TPM= 23.54 Transcript Type= protein_coding chr11 62690295 62706234 62690295 62706234 - ENST00000403550.5@BSCL2 ENST00000403550.5 protein_coding 62705916,62705301,62702468,62694568,62692663,62692376,62691280,62691075,62690787,62690612,62690295 62706234,62705617,62702549,62694711,62692797,62692473,62691421,62691141,62690867,62690692,62690521 Gene ID= ENSG00000168000.14 TPM= 3.62 Transcript Type= protein_coding chr11 62728539 62738636 62728539 62738636 + ENST00000316461.8@TTC9C ENST00000316461.8 protein_coding 62728539,62735382,62738288 62729086,62735564,62738636 Gene ID= ENSG00000162222.13 TPM= 5.43 Transcript Type= protein_coding chr11 62750963 62754188 62750963 62754188 - ENST00000394807.3@ZBTB3 ENST00000394807.3 protein_coding 62753964,62750963 62754188,62753715 Gene ID= ENSG00000185670.7 TPM= 15.39 Transcript Type= protein_coding chr11 62761544 62766710 62761544 62766710 + ENST00000301788.11@POLR2G ENST00000301788.11 protein_coding 62761544,62761795,62762867,62765182,62765340,62765653,62766243,62766494 62761660,62761904,62763026,62765232,62765405,62765724,62766276,62766710 Gene ID= ENSG00000168002.11 TPM= 46.18 Transcript Type= protein_coding chr11 62771303 62787342 62771303 62787342 + ENST00000294168.7@TAF6L ENST00000294168.7 protein_coding 62771303,62775771,62776384,62777978,62778285,62778869,62781894,62782113,62782693,62786260,62786517 62771490,62775930,62776470,62778128,62778335,62778963,62781968,62782333,62782825,62786388,62787342 Gene ID= ENSG00000162227.7 TPM= 34.41 Transcript Type= protein_coding chr11 62771365 62787340 62771365 62787340 + transcript2573.chr11.nic@TAF6L transcript2573.chr11.nic protein_coding 62771365,62775771,62776384,62777978,62778285,62778869,62781894,62782113,62786260,62786517 62771490,62775930,62776470,62778128,62778335,62778963,62781968,62782825,62786388,62787340 Gene ID= ENSG00000162227.7 TPM= 9.96 Transcript Type= NA chr11 62771311 62787340 62771311 62787340 + transcript2579.chr11.nic@TAF6L transcript2579.chr11.nic protein_coding 62771311,62775771,62776384,62777978,62778285,62781894,62782113,62786260,62786517 62771490,62775930,62776470,62778128,62778963,62781968,62782825,62786388,62787340 Gene ID= ENSG00000162227.7 TPM= 11.77 Transcript Type= NA chr11 62787427 62790405 62787427 62790405 + ENST00000333449.8@TMEM179B ENST00000333449.8 protein_coding 62787427,62789023,62789292,62789601,62789886 62787527,62789210,62789426,62789679,62790405 Gene ID= ENSG00000185475.10 TPM= 98.25 Transcript Type= protein_coding chr11 62787415 62790246 62787415 62790246 + ENST00000533861.5@TMEM179B ENST00000533861.5 protein_coding 62787415,62789023,62789292,62789886 62787527,62789210,62789426,62790246 Gene ID= ENSG00000185475.10 TPM= 1.36 Transcript Type= protein_coding chr11 62792126 62805492 62792126 62805492 - ENST00000294172.6@NXF1 ENST00000294172.6 protein_coding 62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62800377,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792126 62805492,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62798575,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514 Gene ID= ENSG00000162231.13 TPM= 22.64 Transcript Type= protein_coding chr11 62792123 62805470 62792123 62805470 - ENST00000531709.6@NXF1 ENST00000531709.6 protein_coding 62805329,62803792,62803419,62802177,62801942,62801739,62801562,62801329,62801094,62798539,62797318,62797183,62796460,62796287,62796066,62795901,62794935,62794258,62792641,62792123 62805470,62803978,62803572,62802260,62802046,62801819,62801631,62801417,62801201,62800486,62797386,62797238,62796567,62796345,62796181,62795943,62795007,62794440,62792701,62792514 Gene ID= ENSG00000162231.13 TPM= 51.62 Transcript Type= protein_coding chr11 62806896 62831654 62806896 62831654 - transcript2598.chr11.nic@STX5 transcript2598.chr11.nic protein_coding 62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806896 62831654,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628 Gene ID= ENSG00000162236.11 TPM= 6.79 Transcript Type= NA chr11 62806925 62832042 62806925 62832042 - ENST00000394690.5@STX5 ENST00000394690.5 protein_coding 62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806925 62832042,62831110,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628 Gene ID= ENSG00000162236.11 TPM= 1.81 Transcript Type= protein_coding chr11 62806897 62832088 62806897 62832088 - ENST00000294179.7@STX5 ENST00000294179.7 protein_coding 62831954,62831019,62827561,62827343,62827155,62825423,62825283,62825036,62824459,62824166,62806897 62832088,62831262,62827631,62827398,62827225,62825539,62825339,62825117,62824565,62824287,62807628 Gene ID= ENSG00000162236.11 TPM= 31.24 Transcript Type= protein_coding chr11 62851989 62855886 62851989 62855886 - transcript2603.chr11.nic@SNHG1 transcript2603.chr11.nic processed_transcript 62855865,62855424,62855133,62854888,62854519,62854018,62853801,62853552,62853075,62852811,62851989 62855886,62855466,62855216,62854938,62854551,62854064,62853833,62853590,62853115,62852839,62852681 Gene ID= ENSG00000255717.6 TPM= 2.72 Transcript Type= NA chr11 62856144 62888853 62856144 62888853 + ENST00000377889.6@SLC3A2 ENST00000377889.6 protein_coding 62856144,62881019,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331 62856381,62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888853 Gene ID= ENSG00000168003.16 TPM= 1.47 Transcript Type= protein_coding chr11 62856111 62888860 62856111 62888860 + ENST00000377891.6@SLC3A2 ENST00000377891.6 protein_coding 62856111,62871577,62876784,62881019,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331 62856381,62871669,62876879,62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888860 Gene ID= ENSG00000168003.16 TPM= 1.62 Transcript Type= protein_coding chr11 62856168 62888875 62856168 62888875 + ENST00000535296.5@SLC3A2 ENST00000535296.5 protein_coding 62856168,62871577,62881019,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331 62856381,62871669,62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888875 Gene ID= ENSG00000168003.16 TPM= 4.79 Transcript Type= protein_coding chr11 62880872 62888855 62880872 62888855 + ENST00000338663.11@SLC3A2 ENST00000338663.11 protein_coding 62880872,62881893,62882908,62884457,62884632,62885177,62885465,62888135,62888331 62881447,62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888855 Gene ID= ENSG00000168003.16 TPM= 314.49 Transcript Type= protein_coding chr11 62881725 62888845 62881725 62888845 + ENST00000536981.5@SLC3A2 ENST00000536981.5 protein_coding 62881725,62882908,62884457,62884632,62885177,62885465,62888135,62888331 62882066,62882999,62884525,62884690,62885357,62885608,62888218,62888845 Gene ID= ENSG00000168003.16 TPM= 16.3 Transcript Type= protein_coding chr11 63536821 63546462 63536821 63546462 + ENST00000255688.7@RARRES3 ENST00000255688.7 protein_coding 63536821,63539516,63544621,63546149 63536877,63539624,63544889,63546462 Gene ID= ENSG00000133321.10 TPM= 18.11 Transcript Type= protein_coding chr11 63624087 63671612 63624087 63671612 - ENST00000398868.7@ATL3 ENST00000398868.7 protein_coding 63671290,63659038,63658761,63652471,63651936,63646507,63644169,63643357,63636207,63635534,63633026,63631040,63624087 63671612,63659252,63658904,63652575,63651986,63646563,63644261,63643495,63636334,63635590,63633097,63631471,63629405 Gene ID= ENSG00000184743.12 TPM= 170.24 Transcript Type= protein_coding chr11 63681450 63759891 63681450 63759891 + ENST00000356000.7@RTN3 ENST00000356000.7 protein_coding 63681450,63704851,63749991,63752507,63753069,63753662,63756112,63758156 63681778,63704907,63750198,63752645,63753138,63753708,63756170,63759891 Gene ID= ENSG00000133318.13 TPM= 4.83 Transcript Type= protein_coding chr11 63681483 63759891 63681483 63759891 + ENST00000339997.8@RTN3 ENST00000339997.8 protein_coding 63681483,63718702,63749991,63752507,63753069,63753662,63756112,63758156 63681778,63721032,63750198,63752645,63753138,63753708,63756170,63759891 Gene ID= ENSG00000133318.13 TPM= 2.42 Transcript Type= protein_coding chr11 63681446 63759882 63681446 63759882 + ENST00000341307.6@RTN3 ENST00000341307.6 protein_coding 63681446,63749991,63752507,63753069,63753662,63758156 63681778,63750198,63752645,63753138,63753708,63759882 Gene ID= ENSG00000133318.13 TPM= 12.38 Transcript Type= protein_coding chr11 63681500 63759885 63681500 63759885 + ENST00000537981.5@RTN3 ENST00000537981.5 protein_coding 63681500,63749991,63752507,63753069,63753662,63756112,63758156 63681778,63750198,63752645,63753138,63753708,63756170,63759885 Gene ID= ENSG00000133318.13 TPM= 328.11 Transcript Type= protein_coding chr11 63759893 63768821 63759893 63768821 - transcript2645.chr11.nic@C11orf95 transcript2645.chr11.nic protein_coding 63768484,63765807,63759893 63768821,63766304,63763869 Gene ID= ENSG00000188070.9 TPM= 5.43 Transcript Type= NA chr11 63813388 63827718 63813388 63827718 + ENST00000294244.8@C11orf84 ENST00000294244.8 protein_coding 63813388,63817805,63818216,63818527,63818802,63826928 63813813,63818134,63818365,63818652,63819002,63827718 Gene ID= ENSG00000168005.8 TPM= 4.53 Transcript Type= protein_coding chr11 63838891 63911019 63838891 63911019 + transcript2654.chr11.nnic@MARK2 transcript2654.chr11.nnic protein_coding 63838891,63895159,63895580,63898232,63898608,63898763,63899052,63899874,63900559,63900780,63900957,63902198,63909423 63839560,63895338,63895633,63898280,63898673,63898833,63899108,63900110,63900678,63900879,63901069,63902267,63911019 Gene ID= ENSG00000072518.20 TPM= 8.15 Transcript Type= NA chr11 63938687 63957326 63938687 63957326 + transcript2666.chr11.nic@NAA40 transcript2666.chr11.nic protein_coding 63938687,63945840,63952238,63952407,63953972,63954338 63939102,63947003,63952333,63952839,63954049,63957326 Gene ID= ENSG00000110583.12 TPM= 3.92 Transcript Type= NA chr11 63938996 63957328 63938996 63957328 + ENST00000377793.8@NAA40 ENST00000377793.8 protein_coding 63938996,63945840,63946951,63952238,63952407,63952756,63953972,63954338 63939102,63945935,63947003,63952333,63952565,63952839,63954049,63957328 Gene ID= ENSG00000110583.12 TPM= 23.84 Transcript Type= protein_coding chr11 63938959 63957319 63938959 63957319 + ENST00000338447.10@NAA40 ENST00000338447.10 protein_coding 63938959,63945840,63952238,63952407,63952756,63953972,63954338 63939102,63947003,63952333,63952565,63952839,63954049,63957319 Gene ID= ENSG00000110583.12 TPM= 3.92 Transcript Type= retained_intron chr11 63974607 63976543 63974607 63976543 + ENST00000314133.3@COX8A ENST00000314133.3 protein_coding 63974607,63976225 63974794,63976543 Gene ID= ENSG00000176340.3 TPM= 225.48 Transcript Type= protein_coding chr11 63986413 63998415 63986413 63998415 + ENST00000538426.5@OTUB1 ENST00000538426.5 protein_coding 63986413,63988337,63988654,63996530,63996857,63997050,63997349 63986514,63988398,63988752,63996648,63996941,63997244,63998415 Gene ID= ENSG00000167770.11 TPM= 120.44 Transcript Type= protein_coding chr11 63998552 64166131 63998552 64166131 - transcript2681.chr11.nic@MACROD1 transcript2681.chr11.nic protein_coding 64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998838,63998552 64166131,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999036,63998687 Gene ID= ENSG00000133315.10 TPM= 1.81 Transcript Type= NA chr11 63998558 64166061 63998558 64166061 - ENST00000255681.6@MACROD1 ENST00000255681.6 protein_coding 64165697,64152292,64151239,64015252,64000227,63999642,63999530,63999331,63998955,63998838,63998558 64166061,64152393,64151355,64015281,64000343,63999763,63999560,63999404,63999036,63998872,63998687 Gene ID= ENSG00000133315.10 TPM= 17.21 Transcript Type= protein_coding chr11 64186115 64204543 64186115 64204543 + ENST00000305218.8@STIP1 ENST00000305218.8 protein_coding 64186115,64193078,64194189,64194479,64195645,64197271,64197493,64197854,64199940,64200169,64202876,64203125,64203450,64204054 64186270,64193287,64194330,64194620,64195813,64197397,64197595,64197974,64200036,64200293,64202912,64203228,64203622,64204543 Gene ID= ENSG00000168439.16 TPM= 273.47 Transcript Type= protein_coding chr11 64206652 64223891 64206652 64223891 + transcript2703.chr11.nic@FERMT3 transcript2703.chr11.nic protein_coding 64206652,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219891,64220220,64221016,64223048,64223313 64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220669,64221140,64223189,64223891 Gene ID= ENSG00000149781.12 TPM= 3.62 Transcript Type= NA chr11 64206734 64223886 64206734 64223886 + ENST00000345728.9@FERMT3 ENST00000345728.9 protein_coding 64206734,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219891,64220220,64220436,64221016,64223048,64223313 64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220326,64220669,64221140,64223189,64223886 Gene ID= ENSG00000149781.12 TPM= 53.43 Transcript Type= protein_coding chr11 64206734 64223882 64206734 64223882 + ENST00000279227.9@FERMT3 ENST00000279227.9 protein_coding 64206734,64207351,64210611,64211052,64211275,64211645,64219251,64219524,64219740,64219879,64220220,64220436,64221016,64223048,64223313 64206814,64207524,64210844,64211171,64211443,64211747,64219358,64219658,64219789,64220015,64220326,64220669,64221140,64223189,64223882 Gene ID= ENSG00000149781.12 TPM= 1.81 Transcript Type= protein_coding chr11 64223800 64226227 64223800 64226227 - transcript2725.chr11.nnic@TRPT1 transcript2725.chr11.nnic protein_coding 64226050,64225786,64225139,64224801,64224543,64224285,64224100,64223800 64226227,64225869,64225580,64224970,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 1.97 Transcript Type= NA chr11 64223800 64226254 64223800 64226254 - ENST00000394546.6@TRPT1 ENST00000394546.6 protein_coding 64226050,64225786,64225499,64224795,64224543,64224285,64224100,64223800 64226254,64225869,64225580,64224970,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 34.41 Transcript Type= protein_coding chr11 64223800 64226835 64223800 64226835 - transcript2729.chr11.nnic@TRPT1 transcript2729.chr11.nnic protein_coding 64226098,64225786,64225499,64224801,64224543,64224285,64224100,64223800 64226835,64225869,64225580,64224970,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 2.87 Transcript Type= NA chr11 64223800 64226227 64223800 64226227 - transcript2736.chr11.nic@TRPT1 transcript2736.chr11.nic protein_coding 64226050,64225786,64224801,64224543,64224285,64224100,64223800 64226227,64225869,64225580,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 5.59 Transcript Type= NA chr11 64223800 64226155 64223800 64226155 - transcript2738.chr11.nnic@TRPT1 transcript2738.chr11.nnic protein_coding 64226050,64225786,64225139,64224801,64224285,64224100,64223800 64226155,64225869,64225580,64224970,64224717,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 1.81 Transcript Type= NA chr11 64223863 64226159 64223863 64226159 - transcript2740.chr11.nic@TRPT1 transcript2740.chr11.nic protein_coding 64226050,64224801,64224543,64224285,64224100,64223863 64226159,64224970,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 1.97 Transcript Type= NA chr11 64223800 64226180 64223800 64226180 - transcript2744.chr11.nnic@TRPT1 transcript2744.chr11.nnic protein_coding 64226062,64225786,64224801,64224285,64224100,64223800 64226180,64225869,64225580,64224717,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 1.81 Transcript Type= NA chr11 64223800 64226168 64223800 64226168 - transcript2746.chr11.nic@TRPT1 transcript2746.chr11.nic protein_coding 64226050,64225786,64224801,64224543,64224100,64223800 64226168,64225869,64225580,64224717,64224341,64223967 Gene ID= ENSG00000149743.13 TPM= 1.81 Transcript Type= NA chr11 64223799 64226150 64223799 64226150 - ENST00000394547.7@TRPT1 ENST00000394547.7 protein_coding 64226050,64225499,64224801,64224543,64224285,64224100,64223799 64226150,64225580,64224970,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 12.83 Transcript Type= protein_coding chr11 64223830 64226229 64223830 64226229 - ENST00000539436.5@TRPT1 ENST00000539436.5 protein_coding 64226050,64225786,64224801,64224285,64224100,64223830 64226229,64225869,64225580,64224717,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 3.62 Transcript Type= retained_intron chr11 64223845 64226209 64223845 64226209 - ENST00000317459.10@TRPT1 ENST00000317459.10 protein_coding 64226050,64225786,64225499,64224801,64224543,64224285,64224100,64223845 64226209,64225869,64225580,64224970,64224717,64224341,64224210,64223967 Gene ID= ENSG00000149743.13 TPM= 30.04 Transcript Type= protein_coding chr11 64226252 64234284 64226252 64234284 + transcript2711.chr11.nic@NUDT22 transcript2711.chr11.nic protein_coding 64226252,64226635,64227568,64229247,64229478,64229850,64230183,64230432,64231871,64232430,64232704,64233894,64234073 64226427,64227132,64227666,64229344,64229571,64230070,64230319,64230940,64231964,64232614,64232865,64233980,64234284 Gene ID= ENSG00000149761.8 TPM= 28.68 Transcript Type= NA chr11 64226257 64234284 64226257 64234284 + transcript2716.chr11.nic@NUDT22 transcript2716.chr11.nic protein_coding 64226257,64226635,64227568,64229247,64229478,64229850,64230183,64230432,64231871,64232430,64232704,64233894,64234073 64226297,64227132,64227666,64229344,64229571,64230070,64230319,64230940,64231964,64232614,64232865,64233980,64234284 Gene ID= ENSG00000149761.8 TPM= 45.88 Transcript Type= NA chr11 64226252 64234284 64226252 64234284 + transcript2718.chr11.nic@NUDT22 transcript2718.chr11.nic protein_coding 64226252,64226635,64227568,64229247,64229478,64230183,64230432,64231871,64232430,64232704,64233894,64234073 64226427,64227132,64227666,64229344,64229571,64230319,64230940,64231964,64232614,64232865,64233980,64234284 Gene ID= ENSG00000149761.8 TPM= 27.77 Transcript Type= NA chr11 64226290 64230016 64226290 64230016 + ENST00000279206.7@NUDT22 ENST00000279206.7 protein_coding 64226290,64226635,64227568,64229247,64229478,64229850 64226427,64227132,64227666,64229344,64229571,64230016 Gene ID= ENSG00000149761.8 TPM= 43.47 Transcript Type= protein_coding chr11 64226252 64234284 64226252 64234284 + transcript2714.chr11.nic@DNAJC4 transcript2714.chr11.nic protein_coding 64226252,64226635,64227568,64229247,64229478,64230183,64230432,64231032,64231871,64232430,64232704,64233894,64234073 64226427,64227132,64227666,64229344,64229571,64230319,64230940,64231147,64231964,64232614,64232865,64233980,64234284 Gene ID= ENSG00000110011.13 TPM= 7.24 Transcript Type= NA chr11 64234538 64238793 64234538 64238793 + ENST00000309422.6@VEGFB ENST00000309422.6 protein_coding 64234538,64235458,64235813,64236254,64237187,64237420,64238356 64234893,64235500,64236009,64236327,64237222,64237655,64238793 Gene ID= ENSG00000173511.9 TPM= 102.51 Transcript Type= protein_coding chr11 64234820 64238775 64234820 64238775 + ENST00000426086.2@VEGFB ENST00000426086.2 protein_coding 64234820,64235458,64235813,64236254,64237187,64237521,64238356 64234893,64235500,64236009,64236327,64237222,64237655,64238775 Gene ID= ENSG00000173511.9 TPM= 4.71 Transcript Type= protein_coding chr11 64241535 64244082 64241535 64244082 + transcript2783.chr11.nnic@FKBP2 transcript2783.chr11.nnic protein_coding 64241535,64242384,64243199,64243451,64243841,64243968 64241661,64242558,64243311,64243497,64243876,64244082 Gene ID= ENSG00000173486.12 TPM= 10.87 Transcript Type= NA chr11 64241004 64244124 64241004 64244124 + ENST00000309366.8@FKBP2 ENST00000309366.8 protein_coding 64241004,64242384,64243199,64243451,64243841,64243968 64241132,64242558,64243311,64243497,64243876,64244124 Gene ID= ENSG00000173486.12 TPM= 98.7 Transcript Type= protein_coding chr11 64241156 64244126 64241156 64244126 + ENST00000449942.6@FKBP2 ENST00000449942.6 protein_coding 64241156,64242384,64243199,64243451,64243841,64243968 64241238,64242558,64243311,64243497,64243876,64244126 Gene ID= ENSG00000173486.12 TPM= 4.53 Transcript Type= protein_coding chr11 64244480 64252583 64244480 64252583 - transcript2777.chr11.nnic@PPP1R14B transcript2777.chr11.nnic protein_coding 64252453,64248401,64248050,64246416,64245204,64244930,64244480 64252583,64248598,64248172,64247359,64245287,64244962,64244822 Gene ID= ENSG00000173457.10 TPM= 4.53 Transcript Type= NA chr11 64244480 64245855 64244480 64245855 - transcript2786.chr11.nnic@PPP1R14B transcript2786.chr11.nnic protein_coding 64245377,64245204,64244930,64244480 64245855,64245287,64244962,64244822 Gene ID= ENSG00000173457.10 TPM= 5.43 Transcript Type= NA chr11 64244484 64246941 64244484 64246941 - ENST00000309318.7@PPP1R14B ENST00000309318.7 protein_coding 64246416,64245204,64244930,64244484 64246941,64245287,64244962,64244822 Gene ID= ENSG00000173457.10 TPM= 146.7 Transcript Type= protein_coding chr11 64244549 64245816 64244549 64245816 - ENST00000542235.1@PPP1R14B ENST00000542235.1 protein_coding 64245204,64244930,64244549 64245816,64244962,64244822 Gene ID= ENSG00000173457.10 TPM= 2.72 Transcript Type= protein_coding chr11 64245964 64248217 64245964 64248217 + ENST00000544553.1@AP001453.2 ENST00000544553.1 antisense_RNA 64245964,64247953 64246089,64248217 Gene ID= ENSG00000256940.1 TPM= 7.24 Transcript Type= antisense_RNA chr11 64251523 64267921 64251523 64267921 + ENST00000279230.10@PLCB3 ENST00000279230.10 protein_coding 64251523,64254415,64254748,64254898,64255234,64255396,64255541,64255721,64256376,64256618,64258473,64258885,64259058,64260029,64261400,64261581,64261952,64262407,64262647,64263498,64263691,64264021,64264951,64265192,64265310,64265886,64266126,64266315,64266495,64267185,64267353 64251748,64254492,64254816,64255038,64255313,64255449,64255616,64255821,64256542,64256764,64258713,64258969,64259244,64260234,64261496,64261665,64262076,64262561,64262808,64263597,64263795,64264112,64265104,64265227,64265502,64266039,64266202,64266404,64266552,64267271,64267921 Gene ID= ENSG00000149782.11 TPM= 47.09 Transcript Type= protein_coding chr11 64251575 64267923 64251575 64267923 + ENST00000325234.5@PLCB3 ENST00000325234.5 protein_coding 64251575,64254952,64255234,64255396,64255541,64255721,64256376,64256618,64258473,64258885,64259058,64260029,64261400,64261581,64261952,64262407,64262647,64263498,64263691,64264021,64264951,64265192,64265310,64265886,64266126,64266315,64266495,64267185,64267353 64251748,64255038,64255313,64255449,64255616,64255821,64256542,64256764,64258713,64258969,64259244,64260234,64261496,64261665,64262076,64262561,64262808,64263597,64263795,64264112,64265104,64265227,64265502,64266039,64266202,64266404,64266552,64267271,64267923 Gene ID= ENSG00000149782.11 TPM= 3.62 Transcript Type= protein_coding chr11 64269830 64284639 64269830 64284639 - ENST00000394532.7@BAD ENST00000394532.7 protein_coding 64284182,64271613,64269830 64284639,64271803,64270337 Gene ID= ENSG00000002330.13 TPM= 14.94 Transcript Type= protein_coding chr11 64269834 64284669 64269834 64284669 - ENST00000309032.7@BAD ENST00000309032.7 protein_coding 64284631,64284182,64271613,64269834 64284669,64284376,64271803,64270337 Gene ID= ENSG00000002330.13 TPM= 102.78 Transcript Type= protein_coding chr11 64284766 64289498 64284766 64289498 + transcript2795.chr11.nic@GPR137 transcript2795.chr11.nic protein_coding 64284766,64286510,64286965,64287721,64288065,64288340,64288603,64289037 64285380,64286881,64287014,64287946,64288214,64288468,64288721,64289498 Gene ID= ENSG00000173264.14 TPM= 34.41 Transcript Type= NA chr11 64284803 64289498 64284803 64289498 + transcript2797.chr11.nic@GPR137 transcript2797.chr11.nic protein_coding 64284803,64286510,64286965,64287721,64288065,64288340,64288603,64289037 64285262,64286881,64287014,64287946,64288214,64288468,64288721,64289498 Gene ID= ENSG00000173264.14 TPM= 2.72 Transcript Type= NA chr11 64285482 64289498 64285482 64289498 + transcript2798.chr11.nic@GPR137 transcript2798.chr11.nic protein_coding 64285482,64286510,64286965,64287721,64288065,64288340,64288603,64289037 64285607,64286881,64287014,64287946,64288214,64288468,64288721,64289498 Gene ID= ENSG00000173264.14 TPM= 3.62 Transcript Type= NA chr11 64285848 64289498 64285848 64289498 + transcript2815.chr11.nic@GPR137 transcript2815.chr11.nic protein_coding 64285848,64286965,64287721,64288065,64288603,64289037 64286881,64287014,64287946,64288468,64288721,64289498 Gene ID= ENSG00000173264.14 TPM= 2.72 Transcript Type= NA chr11 64286418 64289494 64286418 64289494 + ENST00000438980.6@GPR137 ENST00000438980.6 protein_coding 64286418,64286965,64287721,64288065,64288340,64288603,64289037 64286881,64287014,64287946,64288214,64288468,64288721,64289494 Gene ID= ENSG00000173264.14 TPM= 5.43 Transcript Type= protein_coding chr11 64306227 64316743 64306227 64316743 + ENST00000405666.5@ESRRA ENST00000405666.5 protein_coding 64306227,64307168,64313951,64314239,64314741,64315001,64315707 64306448,64307504,64314067,64314367,64314911,64315270,64316743 Gene ID= ENSG00000173153.13 TPM= 23.25 Transcript Type= protein_coding chr11 64305578 64316738 64305578 64316738 + ENST00000000442.10@ESRRA ENST00000000442.10 protein_coding 64305578,64307168,64313951,64314239,64314741,64315001,64315707 64305736,64307504,64314067,64314367,64314911,64315270,64316738 Gene ID= ENSG00000173153.13 TPM= 16 Transcript Type= protein_coding chr11 64316691 64318084 64316691 64318084 - ENST00000544844.5@TRMT112 ENST00000544844.5 protein_coding 64317449,64317264,64317058,64316691 64318084,64317365,64317147,64316968 Gene ID= ENSG00000173113.6 TPM= 197.41 Transcript Type= protein_coding chr11 64316695 64317558 64316695 64317558 - ENST00000308774.6@TRMT112 ENST00000308774.6 protein_coding 64317449,64317264,64317058,64316695 64317558,64317365,64317132,64316968 Gene ID= ENSG00000173113.6 TPM= 4.53 Transcript Type= protein_coding chr11 64316696 64317553 64316696 64317553 - ENST00000539854.1@TRMT112 ENST00000539854.1 protein_coding 64317449,64317264,64316696 64317553,64317365,64317147 Gene ID= ENSG00000173113.6 TPM= 2.72 Transcript Type= protein_coding chr11 64318103 64321822 64318103 64321822 + transcript2839.chr11.nnic@PRDX5 transcript2839.chr11.nnic protein_coding 64318103,64320661,64320865,64321007,64321586 64318386,64320792,64320903,64321068,64321822 Gene ID= ENSG00000126432.13 TPM= 19.92 Transcript Type= NA chr11 64318088 64321811 64318088 64321811 + ENST00000265462.8@PRDX5 ENST00000265462.8 protein_coding 64318088,64319734,64320661,64320865,64321007,64321586 64318386,64319868,64320792,64320903,64321068,64321811 Gene ID= ENSG00000126432.13 TPM= 421.98 Transcript Type= protein_coding chr11 64340215 64357535 64340215 64357535 + transcript2845.chr11.nnic@CCDC88B transcript2845.chr11.nnic protein_coding 64340215,64340607,64340907,64341109,64341270,64341421,64341599,64341994,64342294,64342522,64343179,64343507,64343778,64343997,64349331,64349551,64351160,64351476,64352130,64352744,64353054,64353351,64353715,64354004,64354124,64355194,64355560,64357039 64340326,64340752,64341018,64341178,64341328,64341504,64341742,64342139,64342375,64342680,64343325,64343615,64343914,64345157,64349458,64349668,64351255,64351616,64352386,64352887,64353240,64353496,64353813,64354045,64354170,64355400,64355628,64357535 Gene ID= ENSG00000168071.21 TPM= 3.62 Transcript Type= NA chr11 64340223 64357534 64340223 64357534 + ENST00000356786.9@CCDC88B ENST00000356786.9 protein_coding 64340223,64340607,64340907,64341109,64341270,64341421,64341599,64341994,64342294,64342522,64343179,64343507,64343778,64343997,64349331,64349551,64351160,64351476,64352130,64352744,64353054,64353351,64353715,64354004,64355194,64355560,64357039 64340326,64340752,64341018,64341178,64341328,64341504,64341742,64342139,64342375,64342680,64343325,64343615,64343914,64345157,64349458,64349668,64351255,64351616,64352386,64352887,64353240,64353496,64353813,64354170,64355400,64355628,64357534 Gene ID= ENSG00000168071.21 TPM= 8.15 Transcript Type= protein_coding chr11 64355343 64357531 64355343 64357531 + ENST00000472524.1@CCDC88B ENST00000472524.1 protein_coding 64355343,64357039 64355628,64357531 Gene ID= ENSG00000168071.21 TPM= 7.24 Transcript Type= processed_transcript chr11 64359143 64372214 64359143 64372214 + transcript2851.chr11.nnic@RPS6KA4 transcript2851.chr11.nnic protein_coding 64359143,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368468,64368704,64369446,64369699,64370246,64370563,64371283 64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372214 Gene ID= ENSG00000162302.12 TPM= 2.42 Transcript Type= NA chr11 64359143 64372214 64359143 64372214 + transcript2854.chr11.nic@RPS6KA4 transcript2854.chr11.nic protein_coding 64359143,64359378,64360163,64360477,64361134,64361469,64361642,64361907,64365301,64368132,64368468,64368704,64369446,64369699,64370225,64370563,64371283 64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372214 Gene ID= ENSG00000162302.12 TPM= 3.78 Transcript Type= NA chr11 64359171 64372215 64359171 64372215 + ENST00000334205.8@RPS6KA4 ENST00000334205.8 protein_coding 64359171,64359378,64360163,64360477,64361134,64361469,64361642,64361852,64365301,64368132,64368468,64368704,64369446,64369699,64370225,64370563,64371283 64359290,64359449,64360381,64360592,64361241,64361549,64361745,64362002,64365465,64368260,64368601,64368797,64369619,64369893,64370384,64370726,64372215 Gene ID= ENSG00000162302.12 TPM= 35.47 Transcript Type= protein_coding chr11 64726911 64744834 64726911 64744834 - ENST00000377497.7@RASGRP2 ENST00000377497.7 protein_coding 64744742,64742794,64742010,64741439,64740948,64740013,64739636,64739360,64736753,64735903,64735542,64735112,64730053,64729762,64728863,64727296,64726911 64744834,64742937,64742112,64741501,64741079,64740163,64739809,64739476,64737034,64735980,64735664,64735227,64730194,64729798,64729042,64727360,64727131 Gene ID= ENSG00000068831.18 TPM= 2.72 Transcript Type= protein_coding chr11 64740868 64744589 64740868 64744589 - ENST00000394430.5@RASGRP2 ENST00000394430.5 protein_coding 64742794,64742010,64741439,64740868 64744589,64742112,64741501,64741079 Gene ID= ENSG00000068831.18 TPM= 2.72 Transcript Type= protein_coding chr11 64740866 64744859 64740866 64744859 - ENST00000377487.5@RASGRP2 ENST00000377487.5 protein_coding 64744742,64742794,64742010,64741439,64740866 64744859,64742937,64742112,64741501,64741079 Gene ID= ENSG00000068831.18 TPM= 4.53 Transcript Type= protein_coding chr11 64746389 64760297 64746389 64760297 - ENST00000164139.3@PYGM ENST00000164139.3 protein_coding 64759656,64758603,64758437,64758246,64757779,64755447,64755273,64754693,64754253,64753879,64753519,64753073,64752403,64751924,64751597,64751325,64750376,64747224,64746921,64746389 64760297,64758704,64758515,64758349,64757910,64755558,64755355,64754836,64754345,64754025,64753682,64753187,64752504,64752071,64751655,64751466,64750583,64747358,64746987,64746808 Gene ID= ENSG00000068976.13 TPM= 1.81 Transcript Type= protein_coding chr11 64764606 64778770 64764606 64778770 - transcript2876.chr11.nic@SF1 transcript2876.chr11.nic protein_coding 64778362,64777987,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606 64778770,64778146,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64765518 Gene ID= ENSG00000168066.20 TPM= 5.98 Transcript Type= NA chr11 64764606 64778548 64764606 64778548 - transcript2877.chr11.nic@SF1 transcript2877.chr11.nic protein_coding 64778362,64777987,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606 64778548,64778146,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155 Gene ID= ENSG00000168066.20 TPM= 4.17 Transcript Type= NA chr11 64764606 64778786 64764606 64778786 - ENST00000334944.9@SF1 ENST00000334944.9 protein_coding 64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64765951,64764606 64778786,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155,64765518 Gene ID= ENSG00000168066.20 TPM= 4.17 Transcript Type= protein_coding chr11 64764606 64778777 64764606 64778777 - transcript2885.chr11.nic@SF1 transcript2885.chr11.nic protein_coding 64778362,64776498,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606 64778777,64776626,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155 Gene ID= ENSG00000168066.20 TPM= 2.35 Transcript Type= NA chr11 64764606 64778730 64764606 64778730 - ENST00000377390.7@SF1 ENST00000377390.7 protein_coding 64778362,64776498,64773430,64770256,64769964,64769426,64769223,64769022,64768106,64767571,64767192,64766900,64764606 64778730,64776626,64773505,64770408,64770053,64769609,64769338,64769129,64768286,64767844,64767251,64767079,64766155 Gene ID= ENSG00000168066.20 TPM= 26.8 Transcript Type= protein_coding chr11 64789137 64803241 64789137 64803241 - ENST00000377350.7@MAP4K2 ENST00000377350.7 protein_coding 64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64789137 64803241,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797168,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624 Gene ID= ENSG00000168067.11 TPM= 2.11 Transcript Type= protein_coding chr11 64784914 64803241 64784914 64803241 - ENST00000294066.6@MAP4K2 ENST00000294066.6 protein_coding 64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64784914 64803241,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624 Gene ID= ENSG00000168067.11 TPM= 21.43 Transcript Type= protein_coding chr11 64789136 64803212 64789136 64803212 - transcript2889.chr11.nic@MAP4K2 transcript2889.chr11.nic protein_coding 64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790394,64790188,64789889,64789730,64789136 64803212,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790462,64790274,64789959,64789785,64789624 Gene ID= ENSG00000168067.11 TPM= 5.73 Transcript Type= NA chr11 64789136 64803240 64789136 64803240 - transcript2894.chr11.nnic@MAP4K2 transcript2894.chr11.nnic protein_coding 64803054,64802885,64802563,64802419,64802066,64801710,64801579,64801111,64800900,64800764,64800311,64800109,64799605,64799421,64798794,64797626,64797501,64797275,64797104,64796982,64796809,64796634,64796493,64796273,64792364,64792172,64791909,64790188,64789889,64789730,64789136 64803240,64802942,64802653,64802483,64802121,64801757,64801621,64801183,64801031,64800826,64800392,64800216,64799683,64799479,64798837,64797664,64797534,64797380,64797192,64797023,64796893,64796713,64796553,64796390,64792422,64792275,64792086,64790274,64789959,64789785,64789624 Gene ID= ENSG00000168067.11 TPM= 4.23 Transcript Type= NA chr11 64803523 64810684 64803523 64810684 - transcript2900.chr11.nnic@MEN1 transcript2900.chr11.nnic protein_coding 64810268,64809665,64807891,64807552,64807179,64807011,64806232,64805888,64805635,64805034,64803523 64810684,64810132,64808099,64807680,64807219,64807098,64806368,64806013,64805770,64805198,64804816 Gene ID= ENSG00000133895.14 TPM= 3.06 Transcript Type= NA chr11 64803524 64810741 64803524 64810741 - ENST00000394374.6@MEN1 ENST00000394374.6 protein_coding 64810268,64809650,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803524 64810741,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816 Gene ID= ENSG00000133895.14 TPM= 2.41 Transcript Type= protein_coding chr11 64803516 64810741 64803516 64810741 - ENST00000315422.8@MEN1 ENST00000315422.8 protein_coding 64810268,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516 64810741,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816 Gene ID= ENSG00000133895.14 TPM= 28.9 Transcript Type= protein_coding chr11 64803523 64810684 64803523 64810684 - transcript2910.chr11.nic@MEN1 transcript2910.chr11.nic protein_coding 64810526,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803523 64810684,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816 Gene ID= ENSG00000133895.14 TPM= 27.08 Transcript Type= NA chr11 64803516 64810716 64803516 64810716 - ENST00000312049.10@MEN1 ENST00000312049.10 protein_coding 64810630,64809665,64807891,64807552,64807179,64807011,64806232,64805635,64805034,64803516 64810716,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816 Gene ID= ENSG00000133895.14 TPM= 5.35 Transcript Type= protein_coding chr11 64803516 64810558 64803516 64810558 - ENST00000377321.5@MEN1 ENST00000377321.5 protein_coding 64810514,64809665,64807996,64807552,64807179,64807011,64806232,64805635,64805034,64803516 64810558,64810132,64808099,64807680,64807219,64807098,64806368,64805770,64805198,64804816 Gene ID= ENSG00000133895.14 TPM= 1.5 Transcript Type= protein_coding chr11 64851642 64878719 64851642 64878719 - ENST00000320631.7@EHD1 ENST00000320631.7 protein_coding 64878061,64874421,64859924,64855322,64851642 64878719,64874518,64860336,64855486,64854857 Gene ID= ENSG00000110047.17 TPM= 122.25 Transcript Type= protein_coding chr11 64894539 64917210 64894539 64917210 - transcript2919.chr11.nnic@ATG2A transcript2919.chr11.nnic protein_coding 64916965,64914338,64914081,64913821,64913266,64913038,64912327,64912085,64911842,64911038,64910807,64910616,64910040,64909681,64909271,64908991,64907748,64907525,64907255,64906665,64906334,64906113,64905742,64905563,64903590,64903288,64902510,64902260,64901962,64900884,64900494,64898636,64898261,64898086,64897839,64897671,64897412,64896748,64896462,64895290,64894539 64917210,64914500,64914233,64913923,64913401,64913136,64912423,64912249,64911982,64911275,64910954,64910708,64910195,64909924,64909367,64909150,64907890,64907664,64907415,64906815,64906533,64906193,64905848,64905655,64903660,64903364,64902680,64902386,64902176,64901092,64900629,64898842,64898362,64898170,64897974,64897743,64897494,64896869,64896616,64895442,64895209 Gene ID= ENSG00000110046.12 TPM= 9.96 Transcript Type= NA chr11 64917557 64934476 64917557 64934476 + transcript2928.chr11.nnic@PPP2R5B transcript2928.chr11.nnic protein_coding 64917557,64922989,64924706,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697 64917640,64923102,64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934476 Gene ID= ENSG00000068971.13 TPM= 1.81 Transcript Type= NA chr11 64924656 64934476 64924656 64934476 + transcript2931.chr11.nnic@PPP2R5B transcript2931.chr11.nnic protein_coding 64924656,64925442,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697 64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934476 Gene ID= ENSG00000068971.13 TPM= 1.81 Transcript Type= NA chr11 64924671 64934473 64924671 64934473 + ENST00000164133.6@PPP2R5B ENST00000164133.6 protein_coding 64924671,64925471,64926712,64927802,64928066,64928295,64930322,64930481,64931436,64931559,64931749,64932765,64933145,64933697 64925028,64925933,64926908,64927903,64928158,64928425,64930381,64930589,64931489,64931609,64931868,64932892,64933246,64934473 Gene ID= ENSG00000068971.13 TPM= 23.54 Transcript Type= protein_coding chr11 64987943 64997045 64987943 64997045 - ENST00000301887.8@BATF2 ENST00000301887.8 protein_coding 64996876,64994448,64987943 64997045,64994549,64989812 Gene ID= ENSG00000168062.9 TPM= 4.53 Transcript Type= protein_coding chr11 64987945 64990273 64987945 64990273 - ENST00000435842.2@BATF2 ENST00000435842.2 protein_coding 64990193,64987945 64990273,64989812 Gene ID= ENSG00000168062.9 TPM= 5.43 Transcript Type= protein_coding chr11 65014113 65022184 65014113 65022184 + ENST00000246747.8@ARL2 ENST00000246747.8 protein_coding 65014113,65018364,65018571,65020419,65021721 65014272,65018474,65018733,65020499,65022184 Gene ID= ENSG00000213465.7 TPM= 115.46 Transcript Type= protein_coding chr11 65014180 65022184 65014180 65022184 + ENST00000529384.5@ARL2 ENST00000529384.5 protein_coding 65014180,65018364,65018571,65020419,65021721,65021971 65014272,65018474,65018733,65020499,65021888,65022184 Gene ID= ENSG00000213465.7 TPM= 4.98 Transcript Type= protein_coding chr11 65014192 65022160 65014192 65022160 + ENST00000533729.1@ARL2 ENST00000533729.1 protein_coding 65014192,65018364,65018571,65021721 65014272,65018474,65018733,65022160 Gene ID= ENSG00000213465.7 TPM= 3.62 Transcript Type= protein_coding chr11 65027425 65040578 65027425 65040578 + transcript2942.chr11.nnic@ARL2-SNX15 transcript2942.chr11.nnic protein_coding 65027425,65032168,65032431,65034847,65035059,65035520,65038275,65038572,65039686 65027636,65032203,65032551,65034962,65035206,65035663,65038357,65038829,65040578 Gene ID= ENSG00000273003.1 TPM= 1.81 Transcript Type= NA chr11 65027408 65040572 65027408 65040572 + ENST00000377244.7@SNX15 ENST00000377244.7 protein_coding 65027408,65032168,65032431,65034847,65035059,65035520,65038572,65039686 65027636,65032203,65032551,65034962,65035206,65035663,65038829,65040572 Gene ID= ENSG00000110025.12 TPM= 53.43 Transcript Type= protein_coding chr11 65040886 65044833 65040886 65044833 + transcript2952.chr11.nic@SAC3D1 transcript2952.chr11.nic protein_coding 65040886,65041286,65043025,65044225 65041106,65041866,65043164,65044833 Gene ID= ENSG00000168061.14 TPM= 2.72 Transcript Type= NA chr11 65040904 65044827 65040904 65044827 + ENST00000398846.5@SAC3D1 ENST00000398846.5 protein_coding 65040904,65044225 65041866,65044827 Gene ID= ENSG00000168061.14 TPM= 9.96 Transcript Type= protein_coding chr11 65040901 65044799 65040901 65044799 + ENST00000531072.1@SAC3D1 ENST00000531072.1 protein_coding 65040901,65041286,65044225 65041106,65041866,65044799 Gene ID= ENSG00000168061.14 TPM= 4.53 Transcript Type= protein_coding chr11 65041245 65044828 65041245 65044828 + ENST00000529996.1@SAC3D1 ENST00000529996.1 protein_coding 65041245,65043025,65044225 65041866,65043164,65044828 Gene ID= ENSG00000168061.14 TPM= 1.81 Transcript Type= protein_coding chr11 65077452 65084151 65077452 65084151 - ENST00000275517.7@CDCA5 ENST00000275517.7 protein_coding 65083933,65083629,65083485,65083364,65079353,65077452 65084151,65083723,65083550,65083399,65079787,65079187 Gene ID= ENSG00000146670.9 TPM= 4.53 Transcript Type= protein_coding chr11 65084228 65088403 65084228 65088403 + transcript2958.chr11.nic@ZFPL1 transcript2958.chr11.nic protein_coding 65084228,65084691,65085115,65086415,65086720,65086928,65087316,65087928 65084360,65084800,65085226,65086608,65086792,65087074,65087433,65088403 Gene ID= ENSG00000162300.11 TPM= 1.81 Transcript Type= NA chr11 65084211 65088403 65084211 65088403 + transcript2959.chr11.nic@ZFPL1 transcript2959.chr11.nic protein_coding 65084211,65084691,65085115,65086720,65086928,65087316,65087928 65084378,65084800,65086608,65086792,65087074,65087433,65088403 Gene ID= ENSG00000162300.11 TPM= 3.62 Transcript Type= NA chr11 65084223 65085012 65084223 65085012 + ENST00000525509.1@ZFPL1 ENST00000525509.1 protein_coding 65084223,65084691 65084378,65085012 Gene ID= ENSG00000162300.11 TPM= 6.34 Transcript Type= protein_coding chr11 65084235 65088400 65084235 65088400 + ENST00000294258.7@ZFPL1 ENST00000294258.7 protein_coding 65084235,65084691,65085115,65086415,65086720,65086928,65087316,65087928 65084378,65084800,65085226,65086608,65086792,65087074,65087433,65088400 Gene ID= ENSG00000162300.11 TPM= 35.32 Transcript Type= protein_coding chr11 65096159 65111860 65096159 65111860 + ENST00000279281.7@VPS51 ENST00000279281.7 protein_coding 65096159,65096998,65107581,65107803,65108197,65109280,65109705,65110482,65110694,65111327 65096478,65097127,65107727,65108022,65108914,65109495,65109923,65110603,65110781,65111860 Gene ID= ENSG00000149823.8 TPM= 275.29 Transcript Type= protein_coding chr11 65105843 65111728 65105843 65111728 - transcript2989.chr11.nnic@AP003068.1 transcript2989.chr11.nnic antisense_RNA 65111287,65110713,65110372,65105843 65111728,65110848,65110490,65110203 Gene ID= ENSG00000254501.1 TPM= 14.49 Transcript Type= NA chr11 65106292 65111662 65106292 65111662 - transcript2990.chr11.nnic@AP003068.1 transcript2990.chr11.nnic antisense_RNA 65111287,65110372,65106292 65111662,65110764,65110203 Gene ID= ENSG00000254501.1 TPM= 3.62 Transcript Type= NA chr11 65111855 65119630 65111855 65119630 + transcript2969.chr11.nic@TM7SF2 transcript2969.chr11.nic protein_coding 65111855,65112515,65112811,65113220,65113491,65114713,65114913,65115314,65115476,65115893 65111981,65112711,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65119630 Gene ID= ENSG00000149809.14 TPM= 165.32 Transcript Type= NA chr11 65111854 65116356 65111854 65116356 + ENST00000279263.11@TM7SF2 ENST00000279263.11 protein_coding 65111854,65112515,65112811,65113220,65113491,65114713,65114913,65115314,65115476,65115893 65112067,65112711,65112865,65113414,65113594,65114832,65115081,65115394,65115598,65116356 Gene ID= ENSG00000149809.14 TPM= 1247.5 Transcript Type= protein_coding chr11 65111884 65116235 65111884 65116235 + ENST00000345348.9@TM7SF2 ENST00000345348.9 protein_coding 65111884,65112515,65112811,65113220,65113491,65114713,65114913,65115476,65115893 65112067,65112711,65112865,65113414,65113594,65114832,65115081,65115598,65116235 Gene ID= ENSG00000149809.14 TPM= 12.64 Transcript Type= protein_coding chr11 65120628 65122473 65120628 65122473 - ENST00000529639.5@FAU ENST00000529639.5 protein_coding 65122090,65121739,65121500,65120981,65120628 65122473,65121821,65121644,65121036,65120806 Gene ID= ENSG00000149806.10 TPM= 453.98 Transcript Type= protein_coding chr11 65120630 65122057 65120630 65122057 - ENST00000531743.5@FAU ENST00000531743.5 protein_coding 65121739,65121500,65120981,65120630 65122057,65121644,65121036,65120806 Gene ID= ENSG00000149806.10 TPM= 6.64 Transcript Type= protein_coding chr11 65127279 65134533 65127279 65134533 - ENST00000377190.7@SYVN1 ENST00000377190.7 protein_coding 65134456,65133470,65133160,65132922,65132732,65132248,65131470,65131274,65131132,65130920,65130660,65130251,65130002,65129729,65128563,65127279 65134533,65133618,65133252,65133074,65132780,65132351,65131596,65131373,65131197,65131036,65130823,65130379,65130175,65129915,65128714,65128488 Gene ID= ENSG00000162298.18 TPM= 16.3 Transcript Type= protein_coding chr11 65127279 65134532 65127279 65134532 - ENST00000294256.12@SYVN1 ENST00000294256.12 protein_coding 65134456,65133470,65133160,65132922,65132732,65132248,65131470,65131274,65131132,65130920,65130660,65130251,65130002,65129729,65128563,65127279 65134532,65133618,65133252,65133074,65132780,65132351,65131596,65131373,65131197,65131036,65130823,65130379,65130172,65129915,65128714,65128488 Gene ID= ENSG00000162298.18 TPM= 10.87 Transcript Type= protein_coding chr11 65122328 65127371 65122328 65127371 + ENST00000279242.6@MRPL49 ENST00000279242.6 protein_coding 65122328,65124502,65125488,65125726 65122424,65124652,65125612,65127371 Gene ID= ENSG00000149792.8 TPM= 367.65 Transcript Type= protein_coding chr11 65181194 65212006 65181194 65212006 + ENST00000533820.5@CAPN1 ENST00000533820.5 protein_coding 65181194,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260 65181410,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212006 Gene ID= ENSG00000014216.15 TPM= 99.01 Transcript Type= protein_coding chr11 65181745 65212001 65181745 65212001 + ENST00000524773.5@CAPN1 ENST00000524773.5 protein_coding 65181745,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260 65181843,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212001 Gene ID= ENSG00000014216.15 TPM= 13.09 Transcript Type= protein_coding chr11 65181872 65212005 65181872 65212005 + ENST00000279247.10@CAPN1 ENST00000279247.10 protein_coding 65181872,65182701,65183128,65183474,65185917,65186170,65187215,65187955,65188414,65188586,65204683,65205710,65206463,65206780,65208055,65208205,65209323,65209849,65210018,65210336,65210814,65211260 65182013,65182968,65183197,65183592,65186050,65186338,65187298,65188040,65188488,65188746,65204858,65205721,65206674,65206819,65208120,65208262,65209387,65209917,65210096,65210452,65210872,65212005 Gene ID= ENSG00000014216.15 TPM= 396.94 Transcript Type= protein_coding chr11 65261762 65298685 65261762 65298685 + ENST00000265465.7@POLA2 ENST00000265465.7 protein_coding 65261762,65266582,65267477,65268672,65275892,65278730,65279538,65280992,65281670,65282479,65287716,65289050,65289799,65294153,65294546,65295540,65295864,65297120 65262371,65266706,65267568,65268729,65275998,65278923,65279626,65281147,65281732,65282521,65287840,65289088,65289872,65294261,65294652,65295599,65295990,65298685 Gene ID= ENSG00000014138.8 TPM= 10.87 Transcript Type= protein_coding chr11 65261905 65322095 65261905 65322095 + transcript3033.chr11.nnic@POLA2 transcript3033.chr11.nnic protein_coding 65261905,65266582,65267477,65268672,65275892,65278730,65279538,65280992,65281670,65282479,65287716,65289050,65289799,65294153,65294546,65295540,65295864,65320544 65262371,65266706,65267568,65268729,65275998,65278923,65279626,65281147,65281732,65282521,65287840,65289088,65289872,65294261,65294652,65295599,65295990,65322095 Gene ID= ENSG00000014138.8 TPM= 1.81 Transcript Type= NA chr11 65314818 65322429 65314818 65322429 + ENST00000279249.2@CDC42EP2 ENST00000279249.2 protein_coding 65314818,65320544 65314954,65322429 Gene ID= ENSG00000149798.4 TPM= 17.21 Transcript Type= protein_coding chr11 65333754 65353249 65333754 65353249 + ENST00000528416.5@DPF2 ENST00000528416.5 protein_coding 65333754,65340385,65340966,65341399,65343745,65343991,65345666,65345930,65346247,65348850,65351683 65333918,65340545,65341073,65341562,65343837,65344069,65345803,65346058,65346359,65348931,65353249 Gene ID= ENSG00000133884.9 TPM= 90.55 Transcript Type= protein_coding chr11 65367383 65413527 65367383 65413527 + transcript3042.chr11.nnic@FRMD8 transcript3042.chr11.nnic protein_coding 65367383,65367927,65375231,65379776,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242 65367815,65368043,65375337,65379911,65387121,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413527 Gene ID= ENSG00000126391.13 TPM= 6.29 Transcript Type= NA chr11 65386599 65413525 65386599 65413525 + ENST00000317568.9@FRMD8 ENST00000317568.9 protein_coding 65386599,65387037,65389361,65393573,65394041,65394259,65396799,65399736,65400724,65404864,65411242 65386761,65387121,65389528,65393674,65394099,65394425,65397020,65399859,65400867,65405068,65413525 Gene ID= ENSG00000126391.13 TPM= 127.18 Transcript Type= protein_coding chr11 65375698 65383757 65375698 65383757 - transcript3070.chr11.nnic@SLC25A45 transcript3070.chr11.nnic protein_coding 65383318,65380534,65380128,65379867,65379382,65376818,65376536,65375698 65383757,65383126,65380236,65379938,65379561,65377082,65376675,65375896 Gene ID= ENSG00000162241.12 TPM= 3.62 Transcript Type= NA chr11 65422774 65424827 65422774 65424827 + ENST00000499732.2@NEAT1 ENST00000499732.2 lincRNA 65422774,65423627 65423383,65424827 Gene ID= ENSG00000245532.7 TPM= 3.62 Transcript Type= lincRNA chr11 65505207 65506516 65505207 65506516 + ENST00000616691.1@MALAT1 ENST00000616691.1 lincRNA 65505207,65506386 65505662,65506516 Gene ID= ENSG00000251562.7 TPM= 1.81 Transcript Type= lincRNA chr11 65525077 65538704 65525077 65538704 + ENST00000270176.9@SCYL1 ENST00000270176.9 protein_coding 65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270,65538442 65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704 Gene ID= ENSG00000142186.16 TPM= 162.88 Transcript Type= protein_coding chr11 65525085 65538704 65525085 65538704 + ENST00000420247.6@SCYL1 ENST00000420247.6 protein_coding 65525085,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65537037,65537809,65537967,65538270,65538442 65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704 Gene ID= ENSG00000142186.16 TPM= 82.29 Transcript Type= protein_coding chr11 65525121 65538704 65525121 65538704 + ENST00000524944.5@SCYL1 ENST00000524944.5 protein_coding 65525121,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65537967,65538270 65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704 Gene ID= ENSG00000142186.16 TPM= 2.98 Transcript Type= protein_coding chr11 65525112 65538704 65525112 65538704 + ENST00000533862.5@SCYL1 ENST00000533862.5 protein_coding 65525112,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537809,65538004,65538270,65538442 65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538324,65538704 Gene ID= ENSG00000142186.16 TPM= 3.5 Transcript Type= protein_coding chr11 65525077 65538704 65525077 65538704 + ENST00000525364.5@SCYL1 ENST00000525364.5 protein_coding 65525077,65525574,65525921,65526124,65526783,65526962,65530629,65531576,65532692,65535227,65535953,65536259,65536586,65536986,65537812,65537967,65538442 65525264,65525714,65526043,65526350,65526873,65527117,65530787,65531683,65532805,65535382,65536141,65536334,65536750,65537128,65537880,65538182,65538704 Gene ID= ENSG00000142186.16 TPM= 2.07 Transcript Type= protein_coding chr11 65538818 65558228 65538818 65558228 - ENST00000301873.9@LTBP3 ENST00000301873.9 protein_coding 65557629,65554051,65553701,65553425,65553164,65552860,65552248,65551972,65551548,65551402,65551126,65547920,65547690,65547439,65546798,65546442,65543427,65543105,65541600,65541126,65540871,65540486,65540245,65540013,65539720,65539548,65539328,65538818 65558228,65554380,65553903,65553530,65553256,65552982,65552406,65552157,65551564,65551474,65551224,65548045,65547821,65547567,65546920,65546564,65543549,65543224,65541728,65541293,65540954,65540614,65540382,65540153,65539881,65539628,65539459,65539231 Gene ID= ENSG00000168056.15 TPM= 185.64 Transcript Type= protein_coding chr11 65569839 65574199 65569839 65574199 + transcript3119.chr11.nic@SSSCA1 transcript3119.chr11.nic protein_coding 65569839,65570604,65570886,65571391,65573363 65570510,65570755,65570970,65572960,65574199 Gene ID= ENSG00000173465.7 TPM= 14.94 Transcript Type= NA chr11 65570460 65571888 65570460 65571888 + ENST00000531405.5@SSSCA1 ENST00000531405.5 protein_coding 65570460,65570886,65571391 65570755,65570970,65571888 Gene ID= ENSG00000173465.7 TPM= 6.34 Transcript Type= protein_coding chr11 65570430 65571770 65570430 65571770 + ENST00000309328.7@SSSCA1 ENST00000309328.7 protein_coding 65570430,65570604,65570886,65571391 65570510,65570755,65570970,65571770 Gene ID= ENSG00000173465.7 TPM= 32.6 Transcript Type= protein_coding chr11 65572528 65574192 65572528 65574192 + ENST00000530349.1@FAM89B ENST00000530349.1 protein_coding 65572528,65573363 65572960,65574192 Gene ID= ENSG00000176973.7 TPM= 64.29 Transcript Type= protein_coding chr11 65576029 65592649 65576029 65592649 + transcript3123.chr11.nic@EHBP1L1 transcript3123.chr11.nic protein_coding 65576029,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65581539,65583592,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203 65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581373,65581965,65583765,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592649 Gene ID= ENSG00000173442.12 TPM= 4.53 Transcript Type= NA chr11 65576029 65592649 65576029 65592649 + transcript3126.chr11.nnic@EHBP1L1 transcript3126.chr11.nnic protein_coding 65576029,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65581539,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203 65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581373,65581965,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592649 Gene ID= ENSG00000173442.12 TPM= 9.96 Transcript Type= NA chr11 65576029 65592649 65576029 65592649 + transcript3129.chr11.nnic@EHBP1L1 transcript3129.chr11.nnic protein_coding 65576029,65579078,65579341,65579936,65580081,65580337,65581058,65581211,65584241,65584486,65584959,65589751,65589936,65590087,65590493,65591800,65591976,65592203 65576406,65579135,65579436,65579989,65580259,65580479,65581126,65581326,65584398,65584534,65585591,65589820,65589991,65590210,65590592,65591873,65592090,65592649 Gene ID= ENSG00000173442.12 TPM= 6.34 Transcript Type= NA chr11 65597755 65614242 65597755 65614242 - ENST00000309100.7@MAP3K11 ENST00000309100.7 protein_coding 65613018,65608268,65607922,65607641,65607270,65606691,65605946,65605761,65599394,65597755 65614242,65608448,65608070,65607816,65607513,65606804,65606081,65605852,65599768,65598628 Gene ID= ENSG00000173327.7 TPM= 148.36 Transcript Type= protein_coding chr11 65597756 65607026 65597756 65607026 - ENST00000532507.5@MAP3K11 ENST00000532507.5 protein_coding 65606691,65605946,65605761,65599394,65597756 65607026,65606081,65605852,65599768,65598628 Gene ID= ENSG00000173327.7 TPM= 9.35 Transcript Type= protein_coding chr11 65615773 65637439 65615773 65637439 + ENST00000355703.3@PCNX3 ENST00000355703.3 protein_coding 65615773,65616824,65617250,65617470,65617611,65617940,65619537,65619754,65620339,65620831,65622245,65623491,65623929,65624195,65624471,65624925,65625171,65625405,65625652,65625904,65626904,65627405,65628595,65628819,65629357,65629520,65630351,65634126,65634538,65634973,65635218,65635529,65636174,65636391,65636766 65616464,65617011,65617349,65617509,65617706,65619067,65619660,65619932,65620429,65620966,65622366,65623644,65623961,65624366,65624581,65625016,65625280,65625510,65625744,65626054,65627048,65627582,65628703,65628948,65629415,65629735,65630604,65634356,65634641,65635120,65635448,65635803,65636307,65636689,65637439 Gene ID= ENSG00000197136.4 TPM= 26.26 Transcript Type= protein_coding chr11 65638097 65650930 65638097 65650930 + ENST00000534313.5@SIPA1 ENST00000534313.5 protein_coding 65638097,65640831,65642250,65642463,65644955,65645854,65646221,65646456,65647384,65649262,65649561,65649757,65649950,65650138,65650401,65650569 65638182,65641600,65642377,65642639,65645129,65645957,65646378,65647065,65647658,65649480,65649672,65649865,65650051,65650192,65650479,65650930 Gene ID= ENSG00000213445.9 TPM= 168.05 Transcript Type= protein_coding chr11 65653596 65663094 65653596 65663094 - ENST00000406246.7@RELA ENST00000406246.7 protein_coding 65662826,65662179,65661937,65661687,65660124,65659666,65658718,65658287,65655855,65655688,65653596 65663094,65662205,65662088,65661835,65660215,65659797,65658822,65658499,65655935,65655762,65655000 Gene ID= ENSG00000173039.18 TPM= 74.25 Transcript Type= protein_coding chr11 65662990 65671717 65662990 65671717 + transcript3165.chr11.nnic@NA transcript3165.chr11.nnic NA 65662990,65663427,65665421,65666131,65671423 65663148,65663683,65665543,65666217,65671717 Gene ID= novel_gene_chr11_3166 TPM= 1.81 Transcript Type= NA chr11 65711996 65719604 65711996 65719604 + ENST00000377046.7@KAT5 ENST00000377046.7 protein_coding 65711996,65712379,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047 65712279,65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604 Gene ID= ENSG00000172977.12 TPM= 50.47 Transcript Type= protein_coding chr11 65712018 65719604 65712018 65719604 + ENST00000352980.8@KAT5 ENST00000352980.8 protein_coding 65712018,65712379,65712766,65712922,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047 65712279,65712445,65712834,65713058,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719604 Gene ID= ENSG00000172977.12 TPM= 43.22 Transcript Type= protein_coding chr11 65712034 65719602 65712034 65719602 + ENST00000341318.8@KAT5 ENST00000341318.8 protein_coding 65712034,65712766,65712922,65713348,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047 65712445,65712834,65713058,65713503,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719602 Gene ID= ENSG00000172977.12 TPM= 8.96 Transcript Type= protein_coding chr11 65712620 65719603 65712620 65719603 + ENST00000534650.5@KAT5 ENST00000534650.5 protein_coding 65712620,65712922,65713593,65713774,65714495,65714821,65716667,65716889,65718590,65718873,65719047 65712834,65713058,65713667,65713848,65714743,65714910,65716807,65716982,65718749,65718954,65719603 Gene ID= ENSG00000172977.12 TPM= 2.47 Transcript Type= protein_coding chr11 65717675 65720804 65717675 65720804 - transcript3190.chr11.nic@RNASEH2C transcript3190.chr11.nic protein_coding 65720242,65720045,65719681,65717675 65720804,65720164,65719809,65719156 Gene ID= ENSG00000172922.8 TPM= 16.75 Transcript Type= NA chr11 65717673 65720947 65717673 65720947 - ENST00000308418.8@RNASEH2C ENST00000308418.8 protein_coding 65720587,65720242,65720045,65717673 65720947,65720417,65720164,65719809 Gene ID= ENSG00000172922.8 TPM= 77.79 Transcript Type= protein_coding chr11 65854675 65859415 65854675 65859415 - ENST00000525451.6@CFL1 ENST00000525451.6 protein_coding 65859231,65858097,65855935,65855654,65854675 65859415,65858630,65856242,65855730,65855448 Gene ID= ENSG00000172757.12 TPM= 651.99 Transcript Type= protein_coding chr11 65854837 65858333 65854837 65858333 - ENST00000308162.9@CFL1 ENST00000308162.9 protein_coding 65858097,65855935,65855654,65854837 65858333,65856242,65855730,65855448 Gene ID= ENSG00000172757.12 TPM= 651.09 Transcript Type= protein_coding chr11 65854832 65858194 65854832 65858194 - ENST00000530945.1@CFL1 ENST00000530945.1 protein_coding 65858097,65854832 65858194,65856242 Gene ID= ENSG00000172757.12 TPM= 39.84 Transcript Type= retained_intron chr11 65860405 65866439 65860405 65866439 + ENST00000308110.8@MUS81 ENST00000308110.8 protein_coding 65860405,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865017,65865220,65865811,65865986 65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65864815,65865145,65865323,65865894,65866439 Gene ID= ENSG00000172732.11 TPM= 50.94 Transcript Type= protein_coding chr11 65860404 65866384 65860404 65866384 + transcript3203.chr11.nic@MUS81 transcript3203.chr11.nic protein_coding 65860404,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65863804,65864497,65864720,65865220,65865811,65865986 65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863721,65863901,65864613,65865145,65865323,65865894,65866384 Gene ID= ENSG00000172732.11 TPM= 7.47 Transcript Type= NA chr11 65860404 65866384 65860404 65866384 + transcript3206.chr11.nic@MUS81 transcript3206.chr11.nic protein_coding 65860404,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65864497,65864720,65865115,65865220,65865811,65865986 65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863901,65864613,65864815,65865145,65865323,65865894,65866384 Gene ID= ENSG00000172732.11 TPM= 2.04 Transcript Type= NA chr11 65860497 65866384 65860497 65866384 + transcript3208.chr11.nic@MUS81 transcript3208.chr11.nic protein_coding 65860497,65860973,65861350,65861947,65862211,65862444,65863065,65863410,65863600,65864497,65864720,65865220,65865811,65865986 65860888,65861102,65861435,65862045,65862279,65862529,65863205,65863502,65863901,65864613,65865145,65865323,65865894,65866384 Gene ID= ENSG00000172732.11 TPM= 2.94 Transcript Type= NA chr11 65866448 65873622 65866448 65873622 - transcript3221.chr11.nic@EFEMP2 transcript3221.chr11.nic protein_coding 65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866810,65866448 65873622,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079,65866712 Gene ID= ENSG00000172638.12 TPM= 21.13 Transcript Type= NA chr11 65866447 65872906 65866447 65872906 - ENST00000307998.10@EFEMP2 ENST00000307998.10 protein_coding 65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866447 65872906,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079 Gene ID= ENSG00000172638.12 TPM= 128.89 Transcript Type= protein_coding chr11 65866441 65872811 65866441 65872811 - ENST00000531972.5@EFEMP2 ENST00000531972.5 protein_coding 65872683,65872244,65871970,65871157,65870536,65870121,65869857,65868510,65868295,65867861,65866845,65866441 65872811,65872361,65872018,65871363,65870658,65870237,65869976,65868629,65868421,65868056,65867079,65866712 Gene ID= ENSG00000172638.12 TPM= 23.84 Transcript Type= nonsense_mediated_decay chr11 65883922 65888471 65883922 65888471 - transcript3253.chr11.nic@FIBP transcript3253.chr11.nic protein_coding 65888334,65887934,65887600,65886322,65885530,65885078,65884935,65884570,65884311,65883922 65888471,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043 Gene ID= ENSG00000172500.12 TPM= 3.32 Transcript Type= NA chr11 65883921 65888539 65883921 65888539 - ENST00000357519.8@FIBP ENST00000357519.8 protein_coding 65888334,65887934,65887600,65886322,65885530,65885078,65884935,65884570,65884392,65883921 65888539,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043 Gene ID= ENSG00000172500.12 TPM= 78.03 Transcript Type= protein_coding chr11 65883921 65888531 65883921 65888531 - ENST00000338369.6@FIBP ENST00000338369.6 protein_coding 65888334,65887934,65887600,65886322,65885509,65885078,65884935,65884570,65884392,65883921 65888531,65888132,65887726,65886422,65885663,65885186,65884998,65884656,65884489,65884043 Gene ID= ENSG00000172500.12 TPM= 9.21 Transcript Type= protein_coding chr11 65892220 65900526 65892220 65900526 - ENST00000312562.6@FOSL1 ENST00000312562.6 protein_coding 65900241,65896809,65894014,65892220 65900526,65897006,65894121,65893296 Gene ID= ENSG00000175592.8 TPM= 3.62 Transcript Type= protein_coding chr11 65916808 65919117 65916808 65919117 - ENST00000438576.2@C11orf68 ENST00000438576.2 protein_coding 65918910,65916808 65919117,65918218 Gene ID= ENSG00000175573.6 TPM= 26.26 Transcript Type= protein_coding chr11 65916810 65919062 65916810 65919062 - ENST00000449692.3@C11orf68 ENST00000449692.3 protein_coding 65918910,65916810 65919062,65918215 Gene ID= ENSG00000175573.6 TPM= 39.84 Transcript Type= protein_coding chr11 65919257 65921561 65919257 65921561 + ENST00000312515.6@DRAP1 ENST00000312515.6 protein_coding 65919257,65919780,65919948,65920343,65920569,65920884,65921330 65919543,65919852,65920041,65920462,65920662,65920972,65921561 Gene ID= ENSG00000175550.7 TPM= 107.31 Transcript Type= protein_coding chr11 65919724 65921554 65919724 65921554 + ENST00000532933.1@DRAP1 ENST00000532933.1 protein_coding 65919724,65919948,65920343,65920569,65920884,65921330 65919852,65920041,65920462,65920662,65920972,65921554 Gene ID= ENSG00000175550.7 TPM= 3.17 Transcript Type= protein_coding chr11 65961722 65979103 65961722 65979103 + transcript3266.chr11.nic@SART1 transcript3266.chr11.nic protein_coding 65961722,65964006,65964515,65965092,65965342,65965702,65965887,65966076,65966350,65967259,65967471,65967679,65976395,65976656,65977014,65977563,65977764,65978600,65978793,65979012 65962093,65964131,65964570,65965218,65965447,65965779,65965986,65966218,65966556,65967383,65967586,65967821,65976568,65976766,65977101,65977653,65977899,65978689,65978914,65979103 Gene ID= ENSG00000175467.14 TPM= 4.53 Transcript Type= NA chr11 65961689 65979828 65961689 65979828 + ENST00000312397.9@SART1 ENST00000312397.9 protein_coding 65961689,65964074,65964515,65965092,65965342,65965702,65965887,65966076,65966350,65967259,65967471,65967679,65976395,65976656,65977014,65977563,65977764,65978600,65978793,65979012 65962093,65964131,65964570,65965218,65965447,65965779,65965986,65966218,65966556,65967383,65967586,65967821,65976568,65976766,65977101,65977653,65977899,65978689,65978914,65979828 Gene ID= ENSG00000175467.14 TPM= 103.23 Transcript Type= protein_coding chr11 65996548 66002240 65996548 66002240 - transcript3270.chr11.nic@EIF1AD transcript3270.chr11.nic protein_coding 66001910,66000303,66000053,65999567,65999350,65996548 66002240,66000406,66000161,65999675,65999397,65998743 Gene ID= ENSG00000175376.8 TPM= 4.3 Transcript Type= NA chr11 65996545 66002156 65996545 66002156 - ENST00000526451.5@EIF1AD ENST00000526451.5 protein_coding 66002040,66000303,66000053,65999567,65999350,65996545 66002156,66000481,66000161,65999675,65999397,65998743 Gene ID= ENSG00000175376.8 TPM= 2.49 Transcript Type= protein_coding chr11 65996545 66002157 65996545 66002157 - ENST00000312234.6@EIF1AD ENST00000312234.6 protein_coding 66001910,66000303,66000053,65999567,65999350,65996545 66002157,66000476,66000161,65999675,65999397,65998743 Gene ID= ENSG00000175376.8 TPM= 2.49 Transcript Type= protein_coding chr11 65996548 66001471 65996548 66001471 - transcript3274.chr11.nic@EIF1AD transcript3274.chr11.nic protein_coding 66000303,66000053,65999567,65999350,65996548 66001471,66000161,65999675,65999397,65998743 Gene ID= ENSG00000175376.8 TPM= 7.92 Transcript Type= NA chr11 66002228 66004146 66002228 66004146 + ENST00000445560.6@BANF1 ENST00000445560.6 protein_coding 66002228,66003235,66003626 66002513,66003373,66004146 Gene ID= ENSG00000175334.7 TPM= 15.1 Transcript Type= protein_coding chr11 66002079 66004149 66002079 66004149 + ENST00000312175.6@BANF1 ENST00000312175.6 protein_coding 66002079,66003235,66003626 66002570,66003373,66004149 Gene ID= ENSG00000175334.7 TPM= 72.14 Transcript Type= protein_coding chr11 66002756 66004150 66002756 66004150 + transcript3279.chr11.nnic@BANF1 transcript3279.chr11.nnic protein_coding 66002756,66003235,66003626 66002835,66003373,66004150 Gene ID= ENSG00000175334.7 TPM= 8.3 Transcript Type= NA chr11 66002480 66004146 66002480 66004146 + ENST00000524628.1@BANF1 ENST00000524628.1 protein_coding 66002480,66003626 66002570,66004146 Gene ID= ENSG00000175334.7 TPM= 3.17 Transcript Type= processed_transcript chr11 66052336 66068911 66052336 66068911 + ENST00000322535.10@SF3B2 ENST00000322535.10 protein_coding 66052336,66052673,66053027,66055076,66055535,66056838,66057266,66058054,66058314,66058830,66059201,66059515,66059782,66060582,66061686,66061891,66063009,66063400,66063628,66067946,66068148,66068674 66052517,66052719,66053104,66055315,66055585,66056955,66057375,66058150,66058405,66059045,66059338,66059595,66060009,66060731,66061775,66061998,66063116,66063542,66063729,66068045,66068333,66068911 Gene ID= ENSG00000087365.15 TPM= 195.6 Transcript Type= protein_coding chr11 66070454 66244747 66070454 66244747 + ENST00000320580.8@PACS1 ENST00000320580.8 protein_coding 66070454,66193486,66210362,66211134,66216119,66216520,66216695,66219746,66220631,66221154,66227504,66230548,66230805,66232172,66232960,66233785,66234132,66235301,66235898,66238804,66239142,66241427,66242912,66243165 66070842,66193573,66210451,66211259,66216263,66216611,66216775,66219805,66220791,66221247,66227584,66230663,66230940,66232276,66233066,66233939,66234242,66235403,66235940,66238846,66239277,66241653,66243031,66244747 Gene ID= ENSG00000175115.11 TPM= 11.77 Transcript Type= protein_coding chr11 66257294 66267859 66257294 66267859 + ENST00000417856.5@KLC2 ENST00000417856.5 protein_coding 66257294,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873 66257488,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267859 Gene ID= ENSG00000174996.11 TPM= 1.99 Transcript Type= protein_coding chr11 66257627 66267859 66257627 66267859 + transcript3296.chr11.nic@KLC2 transcript3296.chr11.nic protein_coding 66257627,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873 66257730,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267859 Gene ID= ENSG00000174996.11 TPM= 3.8 Transcript Type= NA chr11 66257758 66267859 66257758 66267859 + transcript3301.chr11.nnic@KLC2 transcript3301.chr11.nnic protein_coding 66257758,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66267171 66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267859 Gene ID= ENSG00000174996.11 TPM= 2.9 Transcript Type= NA chr11 66257703 66267860 66257703 66267860 + ENST00000316924.9@KLC2 ENST00000316924.9 protein_coding 66257703,66258547,66261742,66262123,66262814,66263660,66263851,66264046,66264345,66265023,66265168,66265655,66265854,66266093,66266433,66266873 66257871,66258822,66261972,66262192,66263036,66263747,66263952,66264219,66264444,66265072,66265235,66265763,66266012,66266217,66266490,66267860 Gene ID= ENSG00000174996.11 TPM= 44.55 Transcript Type= protein_coding chr11 66268533 66277492 66268533 66277492 + ENST00000311481.10@RAB1B ENST00000311481.10 protein_coding 66268533,66271797,66272157,66272365,66275804,66276044 66268693,66271869,66272252,66272460,66275935,66277492 Gene ID= ENSG00000174903.15 TPM= 248.12 Transcript Type= protein_coding chr11 66284580 66289170 66284580 66289170 - ENST00000376901.8@YIF1A ENST00000376901.8 protein_coding 66288955,66288081,66287812,66287598,66285701,66285381,66284873,66284580 66289170,66288292,66287916,66287676,66285758,66285536,66284966,66284783 Gene ID= ENSG00000174851.15 TPM= 128.89 Transcript Type= protein_coding chr11 66284579 66289169 66284579 66289169 - transcript3319.chr11.nic@YIF1A transcript3319.chr11.nic protein_coding 66288955,66288081,66287812,66285381,66284873,66284579 66289169,66288292,66287916,66287676,66284966,66284783 Gene ID= ENSG00000174851.15 TPM= 4.53 Transcript Type= NA chr11 66284580 66289145 66284580 66289145 - ENST00000359461.10@YIF1A ENST00000359461.10 protein_coding 66288955,66288081,66287812,66287598,66285701,66284873,66284580 66289145,66288292,66287916,66287676,66285758,66284966,66284783 Gene ID= ENSG00000174851.15 TPM= 1.2 Transcript Type= protein_coding chr11 66332062 66336529 66332062 66336529 - ENST00000311320.8@RIN1 ENST00000311320.8 protein_coding 66336317,66335978,66335762,66335610,66335407,66334514,66333919,66333527,66333258,66332062 66336529,66336158,66335876,66335682,66335498,66335251,66334224,66333658,66333409,66332752 Gene ID= ENSG00000174791.10 TPM= 12.68 Transcript Type= protein_coding chr11 66337339 66345125 66337339 66345125 - ENST00000359957.7@BRMS1 ENST00000359957.7 protein_coding 66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337339 66345125,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337889 Gene ID= ENSG00000174744.13 TPM= 42.56 Transcript Type= protein_coding chr11 66337333 66345119 66337333 66345119 - ENST00000425825.6@BRMS1 ENST00000425825.6 protein_coding 66344972,66342096,66341533,66341206,66340967,66340774,66340121,66338721,66338243,66337333 66345119,66342241,66341623,66341333,66341046,66340870,66340213,66338785,66338282,66337807 Gene ID= ENSG00000174744.13 TPM= 3.62 Transcript Type= protein_coding chr11 66345372 66347692 66345372 66347692 - ENST00000311181.4@B4GAT1 ENST00000311181.4 protein_coding 66346490,66345372 66347692,66346240 Gene ID= ENSG00000174684.6 TPM= 142.17 Transcript Type= protein_coding chr11 66347781 66364845 66347781 66364845 + transcript3333.chr11.nnic@AP001107.9 transcript3333.chr11.nnic antisense_RNA 66347781,66353455,66360651,66363269 66348348,66353615,66360744,66364845 Gene ID= ENSG00000255468.6 TPM= 1.81 Transcript Type= NA chr11 66435075 66438848 66435075 66438848 - ENST00000310999.11@MRPL11 ENST00000310999.11 protein_coding 66438632,66438164,66437350,66437104,66435075 66438848,66438259,66437443,66437263,66436112 Gene ID= ENSG00000174547.13 TPM= 22.19 Transcript Type= protein_coding chr11 66435075 66438848 66435075 66438848 - ENST00000430466.6@MRPL11 ENST00000430466.6 protein_coding 66438710,66438164,66437350,66437104,66435075 66438848,66438259,66437443,66437263,66436112 Gene ID= ENSG00000174547.13 TPM= 5.89 Transcript Type= protein_coding chr11 66466873 66477336 66466873 66477336 + transcript3352.chr11.nic@PELI3 transcript3352.chr11.nic protein_coding 66466873,66468128,66471348,66472369,66473241,66473737,66475598 66467027,66468269,66471371,66472470,66473435,66473925,66477336 Gene ID= ENSG00000174516.14 TPM= 2.72 Transcript Type= NA chr11 66466869 66477337 66466869 66477337 + ENST00000320740.11@PELI3 ENST00000320740.11 protein_coding 66466869,66468128,66468833,66471242,66472369,66473241,66473737,66475598 66467027,66468280,66468904,66471371,66472470,66473435,66473925,66477337 Gene ID= ENSG00000174516.14 TPM= 37.13 Transcript Type= protein_coding chr11 66477346 66480231 66477346 66480231 - ENST00000527274.2@AP002748.3 ENST00000527274.2 antisense_RNA 66480039,66477346 66480231,66478096 Gene ID= ENSG00000255517.6 TPM= 1.81 Transcript Type= antisense_RNA chr11 66480412 66509656 66480412 66509656 + transcript3341.chr11.nnic@DPP3 transcript3341.chr11.nnic protein_coding 66480412,66482193,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495365,66495630,66497298,66504612,66509079,66509411 66480465,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495268,66495489,66495750,66497477,66504774,66509314,66509656 Gene ID= ENSG00000254986.7 TPM= 2.11 Transcript Type= NA chr11 66480013 66509657 66480013 66509657 + ENST00000532677.5@DPP3 ENST00000532677.5 protein_coding 66480013,66482196,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495365,66495630,66497298,66504612,66509079 66480465,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495268,66495489,66495750,66497477,66504774,66509657 Gene ID= ENSG00000254986.7 TPM= 27.01 Transcript Type= protein_coding chr11 66480728 66509659 66480728 66509659 + transcript3344.chr11.nic@DPP3 transcript3344.chr11.nic protein_coding 66480728,66482193,66485173,66486540,66487268,66487914,66491253,66491494,66491698,66492716,66493067,66493541,66495206,66495365,66495630,66497298,66504612,66509079 66481025,66482470,66485262,66486677,66487342,66488007,66491383,66491624,66491756,66492910,66493179,66493633,66495268,66495489,66495750,66497477,66504774,66509659 Gene ID= ENSG00000254986.7 TPM= 6.18 Transcript Type= NA chr11 66510609 66533627 66510609 66533627 + ENST00000318312.11@BBS1 ENST00000318312.11 protein_coding 66510609,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270,66523456,66523724,66526123,66526649,66529819,66530894,66531656,66531951 66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521376,66523576,66523882,66526192,66526807,66529952,66531028,66531742,66533627 Gene ID= ENSG00000174483.19 TPM= 32.15 Transcript Type= protein_coding chr11 66510634 66533613 66510634 66533613 + transcript3360.chr11.nic@BBS1 transcript3360.chr11.nic protein_coding 66510634,66511013,66511205,66514406,66515540,66515693,66515861,66519617,66521270,66523456,66526123,66526649,66529819,66530894,66531656,66531951 66510706,66511089,66511239,66514678,66515586,66515731,66515933,66519748,66521376,66523882,66526192,66526807,66529952,66531028,66531742,66533613 Gene ID= ENSG00000174483.19 TPM= 5.89 Transcript Type= NA chr11 66535629 66546238 66535629 66546238 - transcript3370.chr11.nnic@ZDHHC24 transcript3370.chr11.nnic protein_coding 66545723,66543704,66537711,66535629 66546238,66543981,66539824,66536653 Gene ID= ENSG00000174165.7 TPM= 21.73 Transcript Type= NA chr11 66535675 66546035 66535675 66546035 - transcript3376.chr11.nnic@ZDHHC24 transcript3376.chr11.nnic protein_coding 66545723,66543704,66535675 66546035,66543981,66536867 Gene ID= ENSG00000174165.7 TPM= 1.81 Transcript Type= NA chr11 66520637 66546036 66520637 66546036 - ENST00000534073.5@ZDHHC24 ENST00000534073.5 protein_coding 66545723,66543704,66526936,66524155,66520637 66546036,66543981,66527006,66524276,66521466 Gene ID= ENSG00000174165.7 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr11 66535898 66546238 66535898 66546238 - ENST00000310442.4@ZDHHC24 ENST00000310442.4 protein_coding 66545723,66543704,66535898 66546238,66543981,66539824 Gene ID= ENSG00000174165.7 TPM= 50.71 Transcript Type= protein_coding chr11 66563462 66568625 66563462 66568625 - transcript3390.chr11.nic@CTSF transcript3390.chr11.nic protein_coding 66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564088,66563462 66568625,66568082,66567662,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564007 Gene ID= ENSG00000174080.10 TPM= 43.77 Transcript Type= NA chr11 66563463 66568596 66563463 66568596 - ENST00000310325.9@CTSF ENST00000310325.9 protein_coding 66568274,66567984,66567444,66567246,66566291,66566022,66565831,66565671,66564887,66564742,66564558,66564088,66563463 66568596,66568082,66567662,66567321,66566404,66566167,66565927,66565751,66565006,66564806,66564648,66564146,66564007 Gene ID= ENSG00000174080.10 TPM= 665.42 Transcript Type= protein_coding chr11 66593139 66606018 66593139 66606018 + transcript3403.chr11.nic@CCS transcript3403.chr11.nic protein_coding 66593139,66593642,66599116,66600489,66605154,66605489,66605702 66593300,66593714,66599636,66600549,66605416,66605592,66606018 Gene ID= ENSG00000173992.8 TPM= 2.72 Transcript Type= NA chr11 66593139 66606018 66593139 66606018 + transcript3407.chr11.nic@CCS transcript3407.chr11.nic protein_coding 66593139,66593642,66599116,66605339,66605489,66605702 66593300,66593714,66600549,66605416,66605592,66606018 Gene ID= ENSG00000173992.8 TPM= 3.62 Transcript Type= NA chr11 66593186 66606018 66593186 66606018 + transcript3408.chr11.nic@CCS transcript3408.chr11.nic protein_coding 66593186,66599116,66600489,66605339,66605489,66605702 66593300,66599636,66600549,66605416,66605592,66606018 Gene ID= ENSG00000173992.8 TPM= 5.43 Transcript Type= NA chr11 66616582 66627347 66616582 66627347 + ENST00000310137.4@RBM14 ENST00000310137.4 protein_coding 66616582,66624214,66626461 66617057,66625678,66627347 Gene ID= ENSG00000239306.4 TPM= 71.54 Transcript Type= protein_coding chr11 66616626 66646472 66616626 66646472 + transcript3414.chr11.nic@RBM14-RBM4 transcript3414.chr11.nic protein_coding 66616626,66639700,66643450,66646027 66617057,66640123,66644140,66646472 Gene ID= ENSG00000248643.5 TPM= 4.53 Transcript Type= NA chr11 66616626 66646470 66616626 66646470 + transcript3421.chr11.nic@RBM14-RBM4 transcript3421.chr11.nic protein_coding 66616626,66639700,66646027 66617057,66640123,66646470 Gene ID= ENSG00000248643.5 TPM= 5.43 Transcript Type= NA chr11 66638617 66646469 66638617 66646469 + ENST00000310092.11@RBM4 ENST00000310092.11 protein_coding 66638617,66639700,66643450,66646027 66638752,66640123,66644140,66646469 Gene ID= ENSG00000173933.19 TPM= 67.01 Transcript Type= protein_coding chr11 66638698 66646468 66638698 66646468 + ENST00000398692.8@RBM4 ENST00000398692.8 protein_coding 66638698,66639700,66646027 66638752,66640123,66646468 Gene ID= ENSG00000173933.19 TPM= 19.02 Transcript Type= protein_coding chr11 66638698 66641192 66638698 66641192 + ENST00000483858.5@RBM4 ENST00000483858.5 protein_coding 66638698,66639700 66638752,66641192 Gene ID= ENSG00000173933.19 TPM= 2.72 Transcript Type= protein_coding chr11 66638672 66646452 66638672 66646452 + ENST00000408993.6@RBM4 ENST00000408993.6 protein_coding 66638672,66639700,66643450,66646027 66638893,66640123,66644140,66646452 Gene ID= ENSG00000173933.19 TPM= 10.87 Transcript Type= protein_coding chr11 66664998 66677921 66664998 66677921 - ENST00000310046.8@RBM4B ENST00000310046.8 protein_coding 66677764,66676668,66668615,66664998 66677921,66677091,66669291,66665578 Gene ID= ENSG00000173914.11 TPM= 19.92 Transcript Type= protein_coding chr11 66675560 66677877 66675560 66677877 - ENST00000531036.2@RBM4B ENST00000531036.2 protein_coding 66677764,66675560 66677877,66677091 Gene ID= ENSG00000173914.11 TPM= 3.62 Transcript Type= protein_coding chr11 66683085 66728134 66683085 66728134 - transcript3432.chr11.nnic@SPTBN2 transcript3432.chr11.nnic protein_coding 66727986,66721350,66721084,66715830,66715222,66714316,66714091,66713631,66710917,66710582,66708902,66708141,66707516,66705684,66704598,66701584,66700526,66699406,66698992,66698639,66696277,66694139,66693772,66693186,66692970,66692536,66691284,66690039,66689805,66689096,66688653,66688169,66688004,66687868,66687427,66686994,66686398,66683085 66728134,66721440,66721262,66715981,66715395,66714407,66714171,66713746,66711029,66710769,66709019,66708299,66707818,66705837,66705468,66701721,66701282,66699608,66699082,66698785,66696540,66694363,66693861,66693446,66693100,66692740,66691658,66690283,66689943,66689180,66688849,66688311,66688079,66687918,66687647,66687167,66686440,66686104 Gene ID= ENSG00000173898.11 TPM= 7.7 Transcript Type= NA chr11 66685244 66729039 66685244 66729039 - transcript3434.chr11.nic@SPTBN2 transcript3434.chr11.nic protein_coding 66728741,66721084,66715830,66715222,66714316,66714091,66713631,66710917,66710582,66708902,66708141,66707516,66705684,66704598,66701584,66700526,66699406,66698992,66698639,66696277,66694139,66693772,66693186,66692970,66692536,66691284,66690039,66689805,66689096,66688653,66688169,66688004,66687868,66687427,66686994,66686398,66685244 66729039,66721262,66715981,66715395,66714407,66714171,66713746,66711029,66710769,66709019,66708299,66707818,66705837,66705468,66701721,66701282,66699608,66699082,66698785,66696540,66694363,66693861,66693446,66693100,66692740,66691658,66690283,66689943,66689180,66688849,66688311,66688079,66687918,66687647,66687167,66686440,66686104 Gene ID= ENSG00000173898.11 TPM= 7.7 Transcript Type= NA chr11 66744689 66843322 66744689 66843322 + transcript3438.chr11.nic@C11orf80 transcript3438.chr11.nic protein_coding 66744689,66748379,66756353,66759043,66788160,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564,66828266,66838370,66842849,66843169 66744919,66748517,66756505,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843322 Gene ID= ENSG00000173715.15 TPM= 5.89 Transcript Type= NA chr11 66744751 66843322 66744751 66843322 + transcript3442.chr11.nnic@C11orf80 transcript3442.chr11.nnic protein_coding 66744751,66748379,66759043,66788160,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564,66828266,66838370,66842849,66843169 66744919,66748517,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843322 Gene ID= ENSG00000173715.15 TPM= 4.07 Transcript Type= NA chr11 66744787 66843322 66744787 66843322 + ENST00000540737.5@C11orf80 ENST00000540737.5 protein_coding 66744787,66759043,66788160,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564,66828266,66838370,66842849,66843169 66744919,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843322 Gene ID= ENSG00000173715.15 TPM= 2.26 Transcript Type= protein_coding chr11 66744812 66823292 66744812 66823292 + transcript3450.chr11.nic@C11orf80 transcript3450.chr11.nic protein_coding 66744812,66759043,66788160,66796281,66800641,66801031,66803995,66813865,66816053,66821643,66822564 66744919,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66823292 Gene ID= ENSG00000173715.15 TPM= 1.81 Transcript Type= NA chr11 66744736 66843328 66744736 66843328 + ENST00000525908.5@C11orf80 ENST00000525908.5 protein_coding 66744736,66748379,66756353,66759043,66788160,66796281,66800641,66801031,66803998,66813865,66816053,66821643,66822564,66828266,66838367,66842849,66843169 66744919,66748517,66756505,66759096,66788269,66796364,66800696,66801102,66804190,66814015,66816199,66821764,66822674,66828364,66838445,66843069,66843328 Gene ID= ENSG00000173715.15 TPM= 10.41 Transcript Type= protein_coding chr11 66843412 66846546 66843412 66846546 + ENST00000309657.7@RCE1 ENST00000309657.7 protein_coding 66843412,66843759,66843956,66844286,66844869,66845166,66845500,66845860 66843640,66843861,66844039,66844364,66845036,66845237,66845562,66846546 Gene ID= ENSG00000173653.7 TPM= 11.05 Transcript Type= protein_coding chr11 66843411 66846531 66843411 66846531 + transcript3479.chr11.nic@RCE1 transcript3479.chr11.nic protein_coding 66843411,66843759,66843956,66844286,66844869,66845166 66843640,66843861,66844039,66844364,66845036,66846531 Gene ID= ENSG00000173653.7 TPM= 2.9 Transcript Type= NA chr11 66843437 66846528 66843437 66846528 + ENST00000524506.5@RCE1 ENST00000524506.5 protein_coding 66843437,66843759,66843956,66844286,66844869,66845166,66845860 66843640,66843861,66844039,66844364,66845036,66845237,66846528 Gene ID= ENSG00000173653.7 TPM= 1.09 Transcript Type= protein_coding chr11 66843451 66846532 66843451 66846532 + ENST00000524849.5@RCE1 ENST00000524849.5 protein_coding 66843451,66843759,66843960,66844286,66844869,66845166,66845500,66845860 66843640,66843861,66844039,66844364,66845036,66845237,66845562,66846532 Gene ID= ENSG00000173653.7 TPM= 6.52 Transcript Type= nonsense_mediated_decay chr11 66848525 66958376 66848525 66958376 - ENST00000393958.6@PC ENST00000393958.6 protein_coding 66958322,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848525 66958376,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147 Gene ID= ENSG00000173599.13 TPM= 189.08 Transcript Type= protein_coding chr11 66848526 66958376 66848526 66958376 - ENST00000393960.5@PC ENST00000393960.5 protein_coding 66958322,66954249,66952430,66872024,66871687,66871315,66871052,66870775,66870302,66868846,66866187,66863774,66853239,66852747,66852439,66851790,66851040,66850674,66850220,66849937,66849611,66849230,66848526 66958376,66954436,66952468,66872159,66871871,66871480,66871197,66870892,66870453,66868964,66866349,66863956,66853383,66852836,66852660,66851946,66851280,66850923,66850464,66850116,66849859,66849370,66849147 Gene ID= ENSG00000173599.13 TPM= 21.88 Transcript Type= protein_coding chr11 66856612 66860474 66856612 66860474 + transcript3484.chr11.nic@LRFN4 transcript3484.chr11.nic protein_coding 66856612,66857735,66859637 66857296,66859093,66860474 Gene ID= ENSG00000173621.8 TPM= 8.15 Transcript Type= NA chr11 66975277 66977004 66975277 66977004 + ENST00000308963.4@C11orf86 ENST00000308963.4 protein_coding 66975277,66976180 66975638,66977004 Gene ID= ENSG00000173237.4 TPM= 1.81 Transcript Type= protein_coding chr11 67030106 67050857 67030106 67050857 + transcript3494.chr11.nic@SYT12 transcript3494.chr11.nic protein_coding 67030106,67034645,67039811,67043638,67044593,67045744,67048584 67030178,67034838,67040203,67043853,67044713,67045877,67050857 Gene ID= ENSG00000173227.13 TPM= 7.24 Transcript Type= NA chr11 67056818 67072013 67056818 67072013 + ENST00000308831.6@RHOD ENST00000308831.6 protein_coding 67056818,67065896,67066738,67070425,67071435 67057034,67065983,67066847,67070559,67072013 Gene ID= ENSG00000173156.6 TPM= 4.53 Transcript Type= protein_coding chr11 67266367 67286559 67266367 67286559 + transcript3509.chr11.nic@GRK2 transcript3509.chr11.nic protein_coding 67266367,67277272,67279200,67279418,67279626,67279839,67280732,67281459,67281650,67281822,67282271,67282435,67282752,67283128,67283707,67283854,67284211,67284847,67285075,67285286 67266812,67277348,67279273,67279519,67279700,67279900,67281184,67281558,67281728,67281952,67282365,67282542,67282818,67283228,67283773,67283949,67284373,67284983,67285188,67286559 Gene ID= ENSG00000173020.10 TPM= 11.77 Transcript Type= NA chr11 67266410 67286556 67266410 67286556 + ENST00000308595.9@GRK2 ENST00000308595.9 protein_coding 67266410,67277272,67279200,67279418,67279626,67279839,67280732,67281093,67281459,67281650,67281822,67282271,67282435,67282752,67283128,67283707,67283854,67284211,67284847,67285075,67285286 67266812,67277348,67279273,67279519,67279700,67279900,67280783,67281184,67281558,67281728,67281952,67282365,67282542,67282818,67283228,67283773,67283949,67284373,67284983,67285188,67286556 Gene ID= ENSG00000173020.10 TPM= 230.91 Transcript Type= protein_coding chr11 67288548 67302500 67288548 67302500 + transcript3523.chr11.nic@ANKRD13D transcript3523.chr11.nic protein_coding 67288548,67290078,67290322,67290592,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119 67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302500 Gene ID= ENSG00000172932.14 TPM= 7.32 Transcript Type= NA chr11 67289294 67302500 67289294 67302500 + transcript3525.chr11.nic@ANKRD13D transcript3525.chr11.nic protein_coding 67289294,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119 67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299621,67299888,67300123,67301147,67301398,67301651,67301823,67302500 Gene ID= ENSG00000172932.14 TPM= 3.69 Transcript Type= NA chr11 67289291 67302483 67289291 67302483 + ENST00000511455.6@ANKRD13D ENST00000511455.6 protein_coding 67289291,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119 67289550,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302483 Gene ID= ENSG00000172932.14 TPM= 25.74 Transcript Type= protein_coding chr11 67289348 67302483 67289348 67302483 + ENST00000308440.10@ANKRD13D ENST00000308440.10 protein_coding 67289348,67289829,67290078,67290322,67291476,67291603,67291991,67299058,67299530,67299827,67299993,67300990,67301282,67301488,67301732,67302119 67289550,67289965,67290213,67290446,67291521,67291746,67292180,67299124,67299611,67299888,67300123,67301147,67301398,67301651,67301823,67302483 Gene ID= ENSG00000172932.14 TPM= 2.19 Transcript Type= protein_coding chr11 67303448 67312611 67303448 67312611 + transcript3533.chr11.nic@SSH3 transcript3533.chr11.nic protein_coding 67303448,67304049,67304773,67306838,67307042,67307371,67307549,67307846,67308174,67308412,67309397,67309768,67310066,67311591 67303691,67304155,67305007,67306962,67307113,67307436,67307737,67307939,67308302,67308458,67309543,67309968,67310339,67312611 Gene ID= ENSG00000172830.12 TPM= 5.05 Transcript Type= NA chr11 67303450 67312611 67303450 67312611 + transcript3540.chr11.nic@SSH3 transcript3540.chr11.nic protein_coding 67303450,67304118,67304773,67306838,67307042,67307371,67307549,67308174,67308412,67309397,67309768,67310066,67311591 67303691,67304155,67305007,67306962,67307113,67307436,67307939,67308302,67308458,67309543,67309968,67310339,67312611 Gene ID= ENSG00000172830.12 TPM= 3.24 Transcript Type= NA chr11 67304055 67312611 67304055 67312611 + transcript3552.chr11.nnic@SSH3 transcript3552.chr11.nnic protein_coding 67304055,67306261,67308174,67308412,67309397,67309768,67310164,67311591 67304452,67307939,67308302,67308458,67309543,67309968,67310339,67312611 Gene ID= ENSG00000172830.12 TPM= 2.94 Transcript Type= NA chr11 67303448 67312600 67303448 67312600 + ENST00000308127.8@SSH3 ENST00000308127.8 protein_coding 67303448,67304118,67304773,67306838,67307042,67307371,67307549,67307846,67308174,67308412,67309397,67309768,67310066,67311591 67303691,67304155,67305007,67306962,67307113,67307436,67307737,67307939,67308302,67308458,67309543,67309968,67310339,67312600 Gene ID= ENSG00000172830.12 TPM= 39.46 Transcript Type= protein_coding chr11 67351550 67353552 67351550 67353552 - transcript3562.chr11.nic@POLD4 transcript3562.chr11.nic protein_coding 67353303,67352691,67351550 67353552,67353077,67352019 Gene ID= ENSG00000175482.8 TPM= 3.62 Transcript Type= NA chr11 67350777 67353579 67350777 67353579 - ENST00000529704.5@POLD4 ENST00000529704.5 protein_coding 67353539,67352988,67352691,67350777 67353579,67353077,67352802,67352019 Gene ID= ENSG00000175482.8 TPM= 28.07 Transcript Type= protein_coding chr11 67351548 67353518 67351548 67353518 - ENST00000530584.5@POLD4 ENST00000530584.5 protein_coding 67353294,67352988,67352691,67351548 67353518,67353077,67352802,67352019 Gene ID= ENSG00000175482.8 TPM= 8.15 Transcript Type= protein_coding chr11 67351550 67353520 67351550 67353520 - transcript3553.chr11.nnic@AP003419.2 transcript3553.chr11.nnic protein_coding 67353183,67352988,67352691,67351550 67353520,67353077,67352802,67352019 Gene ID= ENSG00000256514.1 TPM= 4.53 Transcript Type= NA chr11 67350797 67353587 67350797 67353587 - transcript3561.chr11.nic@AP003419.2 transcript3561.chr11.nic protein_coding 67352988,67352691,67350797 67353587,67352802,67352019 Gene ID= ENSG00000256514.1 TPM= 9.06 Transcript Type= NA chr11 67364169 67373372 67364169 67373372 - transcript3566.chr11.nnic@CLCF1 transcript3566.chr11.nnic protein_coding 67372866,67367460,67364169 67373372,67367626,67365630 Gene ID= ENSG00000175505.10 TPM= 2.72 Transcript Type= NA chr11 67364168 67373737 67364168 67373737 - ENST00000312438.7@CLCF1 ENST00000312438.7 protein_coding 67373524,67367460,67364168 67373737,67367626,67365630 Gene ID= ENSG00000175505.10 TPM= 1.81 Transcript Type= protein_coding chr11 67391952 67398409 67391952 67398409 + ENST00000307980.6@RAD9A ENST00000307980.6 protein_coding 67391952,67392161,67392654,67393496,67393691,67395716,67395912,67396111,67396263,67397179,67397464 67392078,67392231,67392782,67393610,67393790,67395825,67396021,67396175,67396400,67397386,67398409 Gene ID= ENSG00000172613.7 TPM= 4.98 Transcript Type= protein_coding chr11 67391951 67398390 67391951 67398390 + transcript3571.chr11.nic@RAD9A transcript3571.chr11.nic protein_coding 67391951,67392161,67392654,67393496,67393723,67395716,67395912,67396111,67396263,67397179,67397464 67392078,67392231,67392782,67393610,67393790,67395825,67396021,67396175,67396400,67397386,67398390 Gene ID= ENSG00000172613.7 TPM= 2.72 Transcript Type= NA chr11 67391951 67398390 67391951 67398390 + transcript3572.chr11.nic@RAD9A transcript3572.chr11.nic protein_coding 67391951,67392161,67393691,67395716,67395912,67396111,67396263,67397179,67397464 67392078,67393610,67393790,67395825,67396021,67396171,67396400,67397386,67398390 Gene ID= ENSG00000172613.7 TPM= 1.81 Transcript Type= NA chr11 67398201 67401931 67398201 67401931 - ENST00000376745.8@PPP1CA ENST00000376745.8 protein_coding 67401728,67401068,67400689,67399561,67398940,67398722,67398201 67401931,67401199,67400919,67399665,67399163,67398856,67398645 Gene ID= ENSG00000172531.14 TPM= 271.66 Transcript Type= protein_coding chr11 67398201 67401604 67398201 67401604 - ENST00000526510.5@PPP1CA ENST00000526510.5 protein_coding 67401068,67400689,67399561,67398940,67398722,67398201 67401604,67400919,67399665,67399163,67398856,67398645 Gene ID= ENSG00000172531.14 TPM= 9.96 Transcript Type= retained_intron chr11 67398183 67401793 67398183 67401793 - ENST00000312989.11@PPP1CA ENST00000312989.11 protein_coding 67401728,67401068,67400689,67399561,67398940,67398722,67398183 67401793,67401232,67400919,67399665,67399163,67398856,67398645 Gene ID= ENSG00000172531.14 TPM= 6.79 Transcript Type= protein_coding chr11 67398201 67401577 67398201 67401577 - ENST00000532446.5@PPP1CA ENST00000532446.5 protein_coding 67401385,67401068,67400689,67399561,67398940,67398722,67398201 67401577,67401199,67400919,67399665,67399163,67398856,67398645 Gene ID= ENSG00000172531.14 TPM= 3.62 Transcript Type= processed_transcript chr11 67428491 67435407 67428491 67435407 + transcript3596.chr11.nic@RPS6KB2 transcript3596.chr11.nic protein_coding 67428491,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434377,67434582,67434989 67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433216,67433447,67434275,67434484,67434694,67435407 Gene ID= ENSG00000175634.14 TPM= 4.07 Transcript Type= NA chr11 67428426 67435407 67428426 67435407 + transcript3597.chr11.nic@RPS6KB2 transcript3597.chr11.nic protein_coding 67428426,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433995,67434198,67434377,67434582,67434989 67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433447,67434057,67434275,67434484,67434694,67435407 Gene ID= ENSG00000175634.14 TPM= 4.98 Transcript Type= NA chr11 67428475 67435407 67428475 67435407 + transcript3599.chr11.nic@RPS6KB2 transcript3599.chr11.nic protein_coding 67428475,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989 67428623,67429240,67429595,67431515,67432657,67432837,67433042,67433216,67433447,67434057,67434275,67434484,67434694,67435407 Gene ID= ENSG00000175634.14 TPM= 3.17 Transcript Type= NA chr11 67428501 67435408 67428501 67435408 + ENST00000312629.9@RPS6KB2 ENST00000312629.9 protein_coding 67428501,67428982,67429120,67429527,67431368,67432600,67432737,67432952,67433126,67433340,67433995,67434198,67434377,67434582,67434989 67428623,67429022,67429240,67429595,67431515,67432657,67432837,67433042,67433216,67433447,67434057,67434275,67434484,67434694,67435408 Gene ID= ENSG00000175634.14 TPM= 56.6 Transcript Type= protein_coding chr11 67435510 67443484 67435510 67443484 - ENST00000616321.4@CORO1B ENST00000616321.4 protein_coding 67443404,67442428,67441966,67441733,67441333,67441125,67440335,67440118,67439786,67438671,67435510 67443484,67442630,67442088,67441862,67441514,67441244,67440484,67440263,67439843,67438949,67438501 Gene ID= ENSG00000172725.13 TPM= 4.98 Transcript Type= nonsense_mediated_decay chr11 67438048 67443821 67438048 67443821 - ENST00000393893.5@CORO1B ENST00000393893.5 protein_coding 67443753,67443404,67442428,67441966,67441733,67441333,67441125,67440335,67440118,67439786,67438671,67438048 67443821,67443465,67442630,67442088,67441862,67441514,67441244,67440439,67440263,67439843,67438949,67438501 Gene ID= ENSG00000172725.13 TPM= 254.46 Transcript Type= protein_coding chr11 67438076 67443512 67438076 67443512 - ENST00000341356.9@CORO1B ENST00000341356.9 protein_coding 67443404,67442428,67441966,67441733,67441333,67441125,67440335,67440118,67439786,67438671,67438076 67443512,67442630,67442088,67441862,67441514,67441244,67440439,67440263,67439843,67438949,67438501 Gene ID= ENSG00000172725.13 TPM= 4.07 Transcript Type= protein_coding chr11 67464350 67469272 67464350 67469272 - transcript3606.chr11.nic@TMEM134 transcript3606.chr11.nic protein_coding 67469019,67468017,67467501,67467312,67465056,67464803,67464350 67469272,67468092,67467563,67467388,67465100,67464856,67464696 Gene ID= ENSG00000172663.8 TPM= 5.95 Transcript Type= NA chr11 67464358 67469272 67464358 67469272 - transcript3616.chr11.nic@TMEM134 transcript3616.chr11.nic protein_coding 67469019,67468028,67467501,67467312,67465056,67464803,67464358 67469272,67468092,67467563,67467388,67465100,67464856,67464661 Gene ID= ENSG00000172663.8 TPM= 3.23 Transcript Type= NA chr11 67464392 67469250 67464392 67469250 - ENST00000393877.3@TMEM134 ENST00000393877.3 protein_coding 67469019,67468028,67467501,67467312,67464803,67464392 67469250,67468092,67467590,67467388,67464856,67464696 Gene ID= ENSG00000172663.8 TPM= 3.62 Transcript Type= protein_coding chr11 67464353 67469239 67464353 67469239 - ENST00000545682.5@TMEM134 ENST00000545682.5 protein_coding 67469019,67468028,67467501,67467312,67465056,67464803,67464353 67469239,67468092,67467590,67467388,67465267,67464856,67464696 Gene ID= ENSG00000172663.8 TPM= 7.76 Transcript Type= nonsense_mediated_decay chr11 67483041 67491103 67483041 67491103 + ENST00000279146.7@AIP ENST00000279146.7 protein_coding 67483041,67487006,67489267,67490038,67490316,67490788 67483257,67487185,67489455,67490214,67490457,67491103 Gene ID= ENSG00000110711.9 TPM= 95.99 Transcript Type= protein_coding chr11 67491756 67505405 67491756 67505405 - transcript3629.chr11.nnic@PITPNM1 transcript3629.chr11.nnic protein_coding 67505188,67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491756 67505405,67504221,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493552,67493062,67492296 Gene ID= ENSG00000110697.12 TPM= 4.68 Transcript Type= NA chr11 67491756 67506034 67491756 67506034 - transcript3634.chr11.nnic@PITPNM1 transcript3634.chr11.nnic protein_coding 67505898,67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491756 67506034,67504221,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296 Gene ID= ENSG00000110697.12 TPM= 8.67 Transcript Type= NA chr11 67491756 67505337 67491756 67505337 - transcript3636.chr11.nnic@PITPNM1 transcript3636.chr11.nnic protein_coding 67505188,67504103,67503737,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493688,67493410,67492934,67491756 67505337,67504221,67503876,67502718,67502413,67502086,67500421,67499992,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493593,67493062,67492296 Gene ID= ENSG00000110697.12 TPM= 3.23 Transcript Type= NA chr11 67491769 67505372 67491769 67505372 - ENST00000356404.7@PITPNM1 ENST00000356404.7 protein_coding 67505188,67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491769 67505372,67504221,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296 Gene ID= ENSG00000110697.12 TPM= 72.96 Transcript Type= protein_coding chr11 67491768 67504369 67491768 67504369 - ENST00000534749.5@PITPNM1 ENST00000534749.5 protein_coding 67504103,67502504,67502292,67501862,67500095,67499914,67499723,67498940,67498596,67498133,67497917,67497522,67497231,67496178,67495438,67495077,67494846,67494244,67493922,67493688,67493410,67492934,67491768 67504369,67502718,67502413,67502086,67500421,67500009,67499830,67499001,67498846,67498322,67498024,67497679,67497436,67496348,67495602,67495225,67494956,67494360,67494070,67493837,67493593,67493062,67492296 Gene ID= ENSG00000110697.12 TPM= 7.76 Transcript Type= protein_coding chr11 67506497 67508631 67506497 67508631 - ENST00000301488.7@CDK2AP2 ENST00000301488.7 protein_coding 67508001,67507592,67507365,67506497 67508631,67507689,67507497,67507012 Gene ID= ENSG00000167797.7 TPM= 77.42 Transcript Type= protein_coding chr11 67506512 67508649 67506512 67508649 - ENST00000525402.5@CDK2AP2 ENST00000525402.5 protein_coding 67507592,67507365,67506512 67508649,67507497,67507012 Gene ID= ENSG00000167797.7 TPM= 7.7 Transcript Type= retained_intron chr11 67583595 67586660 67583595 67586660 + ENST00000398606.7@GSTP1 ENST00000398606.7 protein_coding 67583595,67584134,67584464,67584685,67585138,67586104,67586389 67583844,67584169,67584570,67584772,67585241,67586211,67586660 Gene ID= ENSG00000084207.15 TPM= 316.49 Transcript Type= protein_coding chr11 67606900 67612541 67606900 67612541 + transcript3670.chr11.nic@NDUFV1 transcript3670.chr11.nic protein_coding 67606900,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372 67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612541 Gene ID= ENSG00000167792.11 TPM= 18.04 Transcript Type= NA chr11 67606852 67612506 67606852 67612506 + ENST00000322776.10@NDUFV1 ENST00000322776.10 protein_coding 67606852,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372 67607076,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612506 Gene ID= ENSG00000167792.11 TPM= 216.65 Transcript Type= protein_coding chr11 67606944 67612535 67606944 67612535 + ENST00000415352.6@NDUFV1 ENST00000415352.6 protein_coding 67606944,67608396,67608552,67609452,67610381,67610995,67611403,67611897,67612120,67612372 67607055,67608478,67608722,67609635,67610570,67611207,67611569,67611978,67612265,67612535 Gene ID= ENSG00000167792.11 TPM= 8.98 Transcript Type= protein_coding chr11 67627939 67629921 67627939 67629921 - ENST00000376693.2@NUDT8 ENST00000376693.2 protein_coding 67629718,67628919,67628323,67627939 67629921,67629051,67628400,67628251 Gene ID= ENSG00000167799.9 TPM= 3.62 Transcript Type= protein_coding chr11 67791584 67805340 67791584 67805340 - transcript3681.chr11.nic@FAM86C2P transcript3681.chr11.nic transcribed_unprocessed_pseudogene 67805218,67803002,67799374,67798008,67797660,67796684,67791584 67805340,67803064,67799475,67798141,67797925,67796833,67793293 Gene ID= ENSG00000160172.10 TPM= 2.11 Transcript Type= NA chr11 67791769 67805340 67791769 67805340 - transcript3682.chr11.nic@FAM86C2P transcript3682.chr11.nic transcribed_unprocessed_pseudogene 67805218,67803002,67799374,67797660,67796684,67791769 67805340,67803064,67799475,67798141,67796833,67793293 Gene ID= ENSG00000160172.10 TPM= 3.02 Transcript Type= NA chr11 67791767 67805334 67791767 67805334 - ENST00000529253.5@FAM86C2P ENST00000529253.5 transcribed_unprocessed_pseudogene 67805218,67803002,67796684,67791767 67805334,67803064,67796833,67793293 Gene ID= ENSG00000160172.10 TPM= 1.2 Transcript Type= processed_transcript chr11 67886477 67894093 67886477 67894093 + ENST00000529069.5@AP003716.1 ENST00000529069.5 lincRNA 67886477,67888153,67893879 67886689,67888324,67894093 Gene ID= ENSG00000251637.6 TPM= 8.15 Transcript Type= lincRNA chr11 67887339 67894097 67887339 67894097 + transcript3691.chr11.nnic@AP003716.1 transcript3691.chr11.nnic lincRNA 67887339,67888153,67893879 67887708,67888324,67894097 Gene ID= ENSG00000251637.6 TPM= 6.34 Transcript Type= NA chr11 67991100 68004136 67991100 68004136 - transcript3697.chr11.nic@UNC93B1 transcript3697.chr11.nic protein_coding 68003657,68003022,67999519,67999173,67998359,67997675,67996602,67995611,67993676,67991100 68004136,68003175,67999680,67999305,67998452,67997799,67996784,67995884,67993794,67991857 Gene ID= ENSG00000110057.7 TPM= 7.24 Transcript Type= NA chr11 67991104 68004123 67991104 68004123 - ENST00000227471.6@UNC93B1 ENST00000227471.6 protein_coding 68003948,68003657,68003022,67999519,67999173,67998359,67997675,67996602,67995611,67993676,67991104 68004123,68003798,68003175,67999680,67999305,67998452,67997799,67996784,67995884,67993794,67991857 Gene ID= ENSG00000110057.7 TPM= 198.31 Transcript Type= protein_coding chr11 68014593 68029281 68014593 68029281 + transcript3706.chr11.nnic@ALDH3B1 transcript3706.chr11.nnic protein_coding 68014593,68015297,68018527,68018773,68019170,68019715,68021485,68022595,68026009,68027749 68014793,68015459,68018637,68018893,68019255,68019796,68021871,68022761,68026108,68029281 Gene ID= ENSG00000006534.15 TPM= 4.23 Transcript Type= NA chr11 68010352 68029276 68010352 68029276 + ENST00000342456.10@ALDH3B1 ENST00000342456.10 protein_coding 68010352,68015297,68018527,68018773,68019170,68019715,68021485,68022595,68026009,68027749 68010392,68015459,68018637,68018893,68019255,68019796,68021871,68022761,68026108,68029276 Gene ID= ENSG00000006534.15 TPM= 100.22 Transcript Type= protein_coding chr11 68030723 68036644 68030723 68036644 + transcript3720.chr11.nic@NDUFS8 transcript3720.chr11.nic protein_coding 68030723,68032152,68032286,68032923,68033111,68036253,68036462 68030961,68032209,68032336,68033012,68033283,68036381,68036644 Gene ID= ENSG00000110717.12 TPM= 28.43 Transcript Type= NA chr11 68030627 68036644 68030627 68036644 + ENST00000313468.9@NDUFS8 ENST00000313468.9 protein_coding 68030627,68032152,68032286,68032923,68033111,68036253,68036462 68030733,68032209,68032336,68033012,68033283,68036381,68036644 Gene ID= ENSG00000110717.12 TPM= 582.62 Transcript Type= protein_coding chr11 68039016 68050895 68039016 68050895 + ENST00000265686.7@TCIRG1 ENST00000265686.7 protein_coding 68039016,68041268,68041753,68042643,68042946,68043371,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741 68039119,68041388,68041831,68042863,68043031,68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895 Gene ID= ENSG00000110719.9 TPM= 472.69 Transcript Type= protein_coding chr11 68042980 68050895 68042980 68050895 + ENST00000532635.5@TCIRG1 ENST00000532635.5 protein_coding 68042980,68043571,68043814,68044132,68044958,68047433,68047647,68047882,68048879,68049081,68049663,68049962,68050137,68050487,68050741 68043497,68043653,68043907,68044344,68045102,68047572,68047804,68047972,68048997,68049294,68049788,68050066,68050254,68050664,68050895 Gene ID= ENSG00000110719.9 TPM= 26.26 Transcript Type= protein_coding chr11 68052869 68121411 68052869 68121411 - transcript3734.chr11.nnic@CHKA transcript3734.chr11.nnic protein_coding 68120828,68097019,68089821,68081727,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68061600,68052869 68121411,68097130,68089880,68081848,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68061830,68054047 Gene ID= ENSG00000110721.11 TPM= 2.84 Transcript Type= NA chr11 68052859 68121411 68052859 68121411 - transcript3737.chr11.nnic@CHKA transcript3737.chr11.nnic protein_coding 68120828,68097019,68089821,68081727,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68052859 68121411,68097130,68089880,68081848,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68054047 Gene ID= ENSG00000110721.11 TPM= 4.88 Transcript Type= NA chr11 68052859 68121411 68052859 68121411 - transcript3746.chr11.nnic@CHKA transcript3746.chr11.nnic protein_coding 68120828,68097019,68089821,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68052859 68121411,68097130,68089880,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68054047 Gene ID= ENSG00000110721.11 TPM= 3.07 Transcript Type= NA chr11 68052869 68121411 68052869 68121411 - transcript3749.chr11.nic@CHKA transcript3749.chr11.nic protein_coding 68120828,68097019,68081404,68074717,68070724,68070189,68068879,68066429,68065786,68064525,68061953,68061600,68052869 68121411,68097130,68081457,68074830,68070857,68070293,68068937,68066516,68065894,68064631,68062034,68061830,68054047 Gene ID= ENSG00000110721.11 TPM= 5.56 Transcript Type= NA chr11 68156539 68213844 68156539 68213844 - transcript3758.chr11.nic@KMT5B transcript3758.chr11.nic protein_coding 68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68156539 68213844,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171 Gene ID= ENSG00000110066.14 TPM= 11.77 Transcript Type= NA chr11 68156715 68213897 68156715 68213897 - transcript3764.chr11.nic@KMT5B transcript3764.chr11.nic protein_coding 68213477,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68156715 68213897,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68159171 Gene ID= ENSG00000110066.14 TPM= 4.53 Transcript Type= NA chr11 68165719 68213595 68165719 68213595 - ENST00000402789.5@KMT5B ENST00000402789.5 protein_coding 68213477,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68166982,68165719 68213595,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178,68165948 Gene ID= ENSG00000110066.14 TPM= 1.81 Transcript Type= protein_coding chr11 68165715 68213286 68165715 68213286 - ENST00000401547.6@KMT5B ENST00000401547.6 protein_coding 68213138,68189917,68185781,68180132,68175018,68173804,68171543,68171232,68171015,68165715 68213286,68190152,68185928,68180200,68175183,68173913,68171709,68171251,68171151,68167178 Gene ID= ENSG00000110066.14 TPM= 8.15 Transcript Type= protein_coding chr11 68261341 68272000 68261341 68272000 - transcript3771.chr11.nnic@C11orf24 transcript3771.chr11.nnic protein_coding 68271857,68268054,68263692,68261851,68261341 68272000,68268251,68263866,68262918,68261725 Gene ID= ENSG00000171067.10 TPM= 2.26 Transcript Type= NA chr11 68261335 68271962 68261335 68271962 - ENST00000304271.10@C11orf24 ENST00000304271.10 protein_coding 68271857,68268054,68263692,68261335 68271962,68268251,68263866,68262918 Gene ID= ENSG00000171067.10 TPM= 31.24 Transcript Type= protein_coding chr11 68312591 68379045 68312591 68379045 + transcript3789.chr11.nnic@LRP5 transcript3789.chr11.nnic protein_coding 68312591,68347847,68357650,68363747,68365571,68375231 68312805,68348243,68357847,68363943,68365702,68379045 Gene ID= ENSG00000162337.11 TPM= 8.15 Transcript Type= NA chr11 68312609 68449275 68312609 68449275 + ENST00000294304.11@LRP5 ENST00000294304.11 protein_coding 68312609,68347847,68357650,68363747,68365571,68386316,68389881,68403483,68406524,68409914,68411436,68413689,68416328,68423489,68425102,68425978,68429575,68433602,68436889,68438446,68439777,68446436,68448809 68312805,68348243,68357847,68363943,68365702,68386712,68390052,68403699,68406813,68410140,68411620,68414012,68416527,68423697,68425292,68426187,68429700,68433838,68436999,68438682,68439916,68446533,68449275 Gene ID= ENSG00000162337.11 TPM= 102.33 Transcript Type= protein_coding chr11 68460712 68615331 68460712 68615331 + transcript3798.chr11.nic@PPP6R3 transcript3798.chr11.nic protein_coding 68460712,68505145,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066 68460827,68505271,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615331 Gene ID= ENSG00000110075.14 TPM= 6.66 Transcript Type= NA chr11 68460708 68615332 68460708 68615332 + transcript3803.chr11.nic@PPP6R3 transcript3803.chr11.nic protein_coding 68460708,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613036 68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615332 Gene ID= ENSG00000110075.14 TPM= 2.35 Transcript Type= NA chr11 68460708 68615331 68460708 68615331 + transcript3808.chr11.nnic@PPP6R3 transcript3808.chr11.nnic protein_coding 68460708,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587978,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066 68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615331 Gene ID= ENSG00000110075.14 TPM= 7.56 Transcript Type= NA chr11 68460708 68615331 68460708 68615331 + transcript3814.chr11.nic@PPP6R3 transcript3814.chr11.nic protein_coding 68460708,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68587945,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066 68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615331 Gene ID= ENSG00000110075.14 TPM= 3.94 Transcript Type= NA chr11 68460731 68615334 68460731 68615334 + ENST00000393800.6@PPP6R3 ENST00000393800.6 protein_coding 68460731,68519501,68537659,68544838,68548067,68551121,68554145,68558566,68564303,68567014,68569748,68571040,68574109,68575958,68583043,68587927,68590660,68591576,68596097,68600341,68601863,68603342,68609904,68613066 68460827,68519651,68537891,68545024,68548204,68551186,68554257,68558679,68564432,68567166,68569897,68571104,68574224,68576043,68583129,68588024,68590714,68591706,68596218,68600494,68601969,68603492,68610023,68615334 Gene ID= ENSG00000110075.14 TPM= 34.73 Transcript Type= protein_coding chr11 68707442 68751520 68707442 68751520 - transcript3821.chr11.nic@TESMIN transcript3821.chr11.nic protein_coding 68751420,68750190,68747208,68738700,68715837,68713270,68710874,68707442 68751520,68750699,68747366,68738788,68715939,68713407,68711049,68708500 Gene ID= ENSG00000132749.10 TPM= 3.62 Transcript Type= NA chr11 68785746 68841927 68785746 68841927 - transcript3832.chr11.nic@CPT1A transcript3832.chr11.nic protein_coding 68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68785746 68841927,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68786035 Gene ID= ENSG00000110090.12 TPM= 1.81 Transcript Type= NA chr11 68807180 68841927 68807180 68841927 - transcript3833.chr11.nic@CPT1A transcript3833.chr11.nic protein_coding 68841775,68815334,68812437,68807180 68841927,68815487,68812576,68807638 Gene ID= ENSG00000110090.12 TPM= 1.81 Transcript Type= NA chr11 68754622 68841931 68754622 68841931 - ENST00000376618.6@CPT1A ENST00000376618.6 protein_coding 68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68754622 68841931,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68754851 Gene ID= ENSG00000110090.12 TPM= 8.15 Transcript Type= protein_coding chr11 68754889 68841916 68754889 68841916 - ENST00000265641.9@CPT1A ENST00000265641.9 protein_coding 68841775,68815334,68812437,68807467,68804000,68799218,68796856,68794804,68793315,68784815,68781771,68780640,68775316,68773265,68762627,68761535,68760225,68759569,68754889 68841916,68815487,68812576,68807638,68804101,68799355,68796933,68794911,68793402,68785010,68781959,68780745,68775432,68773429,68762761,68761687,68760338,68759661,68757730 Gene ID= ENSG00000110090.12 TPM= 6.34 Transcript Type= protein_coding chr11 68891276 68903820 68891276 68903820 - ENST00000362034.6@MRPL21 ENST00000362034.6 protein_coding 68903723,68900548,68897927,68896515,68893403,68892890,68891276 68903820,68900605,68898012,68896678,68893455,68892993,68891395 Gene ID= ENSG00000197345.12 TPM= 37.13 Transcript Type= protein_coding chr11 68903842 68940599 68903842 68940599 + ENST00000255078.7@IGHMBP2 ENST00000255078.7 protein_coding 68903842,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68933299,68933795,68934464,68935299,68936237,68938182,68939534 68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68933481,68933913,68934558,68935422,68937091,68938354,68940599 Gene ID= ENSG00000132740.8 TPM= 19.92 Transcript Type= protein_coding chr11 68903893 68940601 68903893 68940601 + transcript3838.chr11.nic@IGHMBP2 transcript3838.chr11.nic protein_coding 68903893,68908145,68908534,68911440,68914823,68917736,68929183,68933299,68933795,68934464,68935299,68936237,68938182,68939534 68904038,68908337,68908631,68911603,68915023,68917883,68929357,68933481,68933913,68934558,68935422,68937091,68938354,68940601 Gene ID= ENSG00000132740.8 TPM= 2.72 Transcript Type= NA chr11 68903866 68930520 68903866 68930520 + transcript3839.chr11.nnic@IGHMBP2 transcript3839.chr11.nnic protein_coding 68903866,68906069,68908145,68908534,68911440,68914823,68917736,68929183,68929734 68904038,68906238,68908337,68908631,68911603,68915023,68917883,68929357,68930520 Gene ID= ENSG00000132740.8 TPM= 1.81 Transcript Type= NA chr11 68903866 68930520 68903866 68930520 + transcript3840.chr11.nic@IGHMBP2 transcript3840.chr11.nic protein_coding 68903866,68906069,68908145,68908534,68911440,68914823,68917736,68929183 68904038,68906238,68908337,68908631,68911603,68915023,68917883,68930520 Gene ID= ENSG00000132740.8 TPM= 4.53 Transcript Type= NA chr11 69048850 69088484 69048850 69088484 + transcript3852.chr11.nic@TPCN2 transcript3852.chr11.nic protein_coding 69048850,69054033,69054721,69055175,69057578,69062884,69063895,69067503,69070430,69071356,69071923,69072627,69072915,69078482,69078734,69078892,69081400,69083945,69085210,69085671,69085848,69086523,69087112,69087875 69049106,69054097,69054797,69055352,69057694,69062990,69063967,69067605,69070495,69071420,69072023,69072708,69073001,69078601,69078793,69079020,69081499,69084016,69085286,69085752,69085930,69086604,69087206,69088484 Gene ID= ENSG00000162341.16 TPM= 1.81 Transcript Type= NA chr11 69048935 69090590 69048935 69090590 + transcript3855.chr11.nic@TPCN2 transcript3855.chr11.nic protein_coding 69048935,69054033,69057578,69062884,69063895,69067503,69070430,69071356,69071923,69072627,69072915,69078482,69078734,69078892,69079834,69081400,69083945,69085210,69085671,69085848,69086523,69087112,69087875 69049106,69054097,69057694,69062990,69063967,69067605,69070495,69071420,69072023,69072708,69073001,69078601,69078793,69079020,69079883,69081499,69084016,69085286,69085752,69085930,69086604,69087206,69090590 Gene ID= ENSG00000162341.16 TPM= 1.81 Transcript Type= NA chr11 69048897 69088524 69048897 69088524 + ENST00000294309.7@TPCN2 ENST00000294309.7 protein_coding 69048897,69054033,69054721,69055175,69057578,69062884,69063895,69067503,69070430,69071356,69071923,69072627,69072915,69078482,69078734,69078892,69079834,69081400,69083945,69085210,69085671,69085848,69086523,69087112,69087875 69049106,69054097,69054797,69055352,69057694,69062990,69063967,69067605,69070495,69071420,69072023,69072708,69073001,69078601,69078793,69079020,69079883,69081499,69084016,69085286,69085752,69085930,69086604,69087206,69088524 Gene ID= ENSG00000162341.16 TPM= 11.77 Transcript Type= protein_coding chr11 69642016 69654475 69642016 69654475 + transcript3866.chr11.nnic@CCND1 transcript3866.chr11.nnic protein_coding 69642016,69643031,69643832,69647994,69651118 69642116,69643246,69643991,69648142,69654475 Gene ID= ENSG00000110092.3 TPM= 2.72 Transcript Type= NA chr11 69641087 69654474 69641087 69654474 + ENST00000227507.2@CCND1 ENST00000227507.2 protein_coding 69641087,69643031,69643832,69647994,69651118 69641511,69643246,69643991,69648142,69654474 Gene ID= ENSG00000110092.3 TPM= 57.95 Transcript Type= protein_coding chr11 69665566 69675370 69665566 69675370 - transcript3870.chr11.nic@ORAOV1 transcript3870.chr11.nic protein_coding 69675190,69673216,69671749,69667895,69667479,69665566 69675370,69673321,69671819,69668012,69667587,69666409 Gene ID= ENSG00000149716.12 TPM= 1.81 Transcript Type= NA chr11 69665563 69675347 69665563 69675347 - ENST00000279147.8@ORAOV1 ENST00000279147.8 protein_coding 69675190,69673216,69671749,69667895,69665563 69675347,69673321,69671819,69668012,69667587 Gene ID= ENSG00000149716.12 TPM= 12.68 Transcript Type= protein_coding chr11 69671378 69675416 69671378 69675416 - ENST00000542341.1@ORAOV1 ENST00000542341.1 protein_coding 69675190,69673216,69671378 69675416,69673321,69671819 Gene ID= ENSG00000149716.12 TPM= 2.72 Transcript Type= protein_coding chr11 70270682 70384411 70270682 70384411 + transcript3878.chr11.nic@PPFIA1 transcript3878.chr11.nic protein_coding 70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70349923,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70382088,70383003 70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70350039,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70382158,70384411 Gene ID= ENSG00000131626.16 TPM= 2.26 Transcript Type= NA chr11 70270682 70363358 70270682 70363358 + transcript3883.chr11.nic@PPFIA1 transcript3883.chr11.nic protein_coding 70270682,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288 70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70363358 Gene ID= ENSG00000131626.16 TPM= 2.72 Transcript Type= NA chr11 70270700 70384400 70270700 70384400 + ENST00000253925.11@PPFIA1 ENST00000253925.11 protein_coding 70270700,70272173,70324402,70324847,70325500,70326262,70326597,70330173,70331960,70333470,70335563,70337365,70338374,70339171,70343669,70348189,70354301,70355639,70356161,70362095,70362288,70372215,70372477,70374918,70376532,70378030,70382088,70383003 70270914,70272436,70324503,70325011,70325574,70326363,70326818,70330319,70332094,70333553,70335694,70337427,70338453,70339306,70343892,70348420,70354452,70355811,70356254,70362176,70362488,70372390,70372574,70375093,70376600,70378195,70382158,70384400 Gene ID= ENSG00000131626.16 TPM= 14.04 Transcript Type= protein_coding chr11 70398498 70436574 70398498 70436574 + transcript3888.chr11.nic@CTTN transcript3888.chr11.nic protein_coding 70398498,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026,70435466,70436282 70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70435119,70435744,70436574 Gene ID= ENSG00000085733.15 TPM= 2.39 Transcript Type= NA chr11 70398498 70436574 70398498 70436574 + transcript3889.chr11.nic@CTTN transcript3889.chr11.nic protein_coding 70398498,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026,70435466 70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70435119,70436574 Gene ID= ENSG00000085733.15 TPM= 6.69 Transcript Type= NA chr11 70398498 70436574 70398498 70436574 + transcript3894.chr11.nic@CTTN transcript3894.chr11.nic protein_coding 70398498,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70422940,70425332,70429051,70431191,70433101,70433647,70435026,70435466 70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70422995,70425401,70429199,70431280,70433278,70433718,70435119,70436574 Gene ID= ENSG00000085733.15 TPM= 4.74 Transcript Type= NA chr11 70398404 70436584 70398404 70436584 + ENST00000346329.7@CTTN ENST00000346329.7 protein_coding 70398404,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70422940,70425332,70429051,70431191,70433101,70433647,70435026 70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70422995,70425401,70429199,70431280,70433278,70433718,70436584 Gene ID= ENSG00000085733.15 TPM= 41.41 Transcript Type= protein_coding chr11 70398498 70409335 70398498 70409335 + transcript3904.chr11.nnic@CTTN transcript3904.chr11.nnic protein_coding 70398498,70405265,70407298,70407518,70409149 70398614,70405361,70407384,70407591,70409335 Gene ID= ENSG00000085733.15 TPM= 2.84 Transcript Type= NA chr11 70398506 70436575 70398506 70436575 + ENST00000301843.12@CTTN ENST00000301843.12 protein_coding 70398506,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70421470,70422940,70425332,70429051,70431191,70433101,70433647,70435026 70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70421580,70422995,70425401,70429199,70431280,70433278,70433718,70436575 Gene ID= ENSG00000085733.15 TPM= 44.27 Transcript Type= protein_coding chr11 70398541 70436579 70398541 70436579 + ENST00000376561.7@CTTN ENST00000376561.7 protein_coding 70398541,70405265,70407298,70407518,70409831,70414542,70415663,70417013,70419746,70420400,70422940,70425332,70429051,70431191,70433101,70433647,70435026,70435466,70436282 70398614,70405361,70407384,70407591,70409960,70414652,70415717,70417123,70419856,70420510,70422995,70425401,70429199,70431280,70433278,70433718,70435119,70435744,70436579 Gene ID= ENSG00000085733.15 TPM= 1.79 Transcript Type= protein_coding chr11 71434414 71448435 71434414 71448435 - ENST00000355527.7@DHCR7 ENST00000355527.7 protein_coding 71448290,71447610,71444855,71443993,71442263,71441227,71438879,71437812,71434414 71448435,71447734,71444958,71444215,71442353,71441440,71439083,71437943,71435839 Gene ID= ENSG00000172893.15 TPM= 242.98 Transcript Type= protein_coding chr11 71434414 71448393 71434414 71448393 - ENST00000407721.6@DHCR7 ENST00000407721.6 protein_coding 71448313,71447610,71444855,71443993,71442263,71441227,71438879,71437812,71434414 71448393,71447734,71444958,71444215,71442353,71441440,71439083,71437943,71435839 Gene ID= ENSG00000172893.15 TPM= 12.07 Transcript Type= protein_coding chr11 71448674 71452157 71448674 71452157 + ENST00000529369.1@AP002387.1 ENST00000529369.1 antisense_RNA 71448674,71451690 71448885,71452157 Gene ID= ENSG00000254682.1 TPM= 3.62 Transcript Type= antisense_RNA chr11 71453185 71501539 71453185 71501539 + transcript3919.chr11.nnic@NADSYN1 transcript3919.chr11.nnic protein_coding 71453185,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71476201,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71477438,71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 2.16 Transcript Type= NA chr11 71453185 71501539 71453185 71501539 + transcript3922.chr11.nnic@NADSYN1 transcript3922.chr11.nnic protein_coding 71453185,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71477345,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71477438,71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 2.16 Transcript Type= NA chr11 71453185 71501539 71453185 71501539 + transcript3923.chr11.nnic@NADSYN1 transcript3923.chr11.nnic protein_coding 71453185,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480186,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71478469,71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 2.16 Transcript Type= NA chr11 71453185 71501539 71453185 71501539 + transcript3927.chr11.nic@NADSYN1 transcript3927.chr11.nic protein_coding 71453185,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71476201,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71475622,71477438,71478469,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 3.98 Transcript Type= NA chr11 71453109 71501816 71453109 71501816 + ENST00000319023.6@NADSYN1 ENST00000319023.6 protein_coding 71453109,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71478469,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501816 Gene ID= ENSG00000172890.11 TPM= 32.05 Transcript Type= protein_coding chr11 71453185 71501539 71453185 71501539 + transcript3929.chr11.nic@NADSYN1 transcript3929.chr11.nic protein_coding 71453185,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 2.16 Transcript Type= NA chr11 71453185 71501539 71453185 71501539 + transcript3932.chr11.nic@NADSYN1 transcript3932.chr11.nic protein_coding 71453185,71455110,71458428,71463432,71464053,71472449,71473278,71473569,71474395,71478395,71480755,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71453381,71455170,71458544,71463485,71464142,71472500,71473366,71473686,71474526,71478469,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 2.94 Transcript Type= NA chr11 71479294 71501539 71479294 71501539 + ENST00000530055.5@NADSYN1 ENST00000530055.5 protein_coding 71479294,71480755,71481356,71481923,71482849,71484312,71485542,71490845,71491834,71497483,71498352,71501302 71480274,71480879,71481404,71482025,71483017,71484447,71485648,71490976,71491903,71497611,71498528,71501539 Gene ID= ENSG00000172890.11 TPM= 2.16 Transcript Type= protein_coding chr11 71787522 71801227 71787522 71801227 + transcript3938.chr11.nic@FAM86C1 transcript3938.chr11.nic protein_coding 71787522,71789783,71791736,71793380,71796017,71799561 71787632,71789845,71791819,71793481,71796166,71801227 Gene ID= ENSG00000158483.15 TPM= 3.17 Transcript Type= NA chr11 71787510 71801234 71787510 71801234 + ENST00000346333.10@FAM86C1 ENST00000346333.10 protein_coding 71787510,71789783,71796017,71799561 71787632,71789845,71796166,71801234 Gene ID= ENSG00000158483.15 TPM= 2.26 Transcript Type= protein_coding chr11 71928701 71997595 71928701 71997595 + ENST00000361756.7@RNF121 ENST00000361756.7 protein_coding 71928701,71957227,71960750,71982761,71987004,71990597,71994719,71995450,71996195 71929124,71957264,71960891,71982915,71987111,71990717,71994852,71995551,71997595 Gene ID= ENSG00000137522.17 TPM= 16.3 Transcript Type= protein_coding chr11 71929082 71997591 71929082 71997591 + ENST00000530137.1@RNF121 ENST00000530137.1 protein_coding 71929082,71960750,71982761,71987004,71990597,71994719,71995450,71996195 71929124,71960891,71982915,71987111,71990717,71994852,71995551,71997591 Gene ID= ENSG00000137522.17 TPM= 1.81 Transcript Type= protein_coding chr11 71998541 72002527 71998541 72002527 + ENST00000393703.8@IL18BP ENST00000393703.8 protein_coding 71998541,71999927,72000351,72001201,72001405,72001784 71999019,72000012,72000557,72001324,72001552,72002527 Gene ID= ENSG00000137496.17 TPM= 5.89 Transcript Type= protein_coding chr11 71999063 72002526 71999063 72002526 + ENST00000404792.5@IL18BP ENST00000404792.5 protein_coding 71999063,72000351,72001201,72001405,72001784 72000012,72000557,72001324,72001552,72002526 Gene ID= ENSG00000137496.17 TPM= 1.36 Transcript Type= protein_coding chr11 72002864 72080687 72002864 72080687 - ENST00000393695.7@NUMA1 ENST00000393695.7 protein_coding 72080458,72069842,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002864 72080687,72069911,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538 Gene ID= ENSG00000137497.17 TPM= 12.89 Transcript Type= protein_coding chr11 72002863 72041416 72002863 72041416 - transcript3966.chr11.nic@NUMA1 transcript3966.chr11.nic protein_coding 72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002863 72041416,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538 Gene ID= ENSG00000137497.17 TPM= 52.73 Transcript Type= NA chr11 72002863 72041986 72002863 72041986 - transcript3968.chr11.nic@NUMA1 transcript3968.chr11.nic protein_coding 72041823,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72012401,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002863 72041986,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72012442,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538 Gene ID= ENSG00000137497.17 TPM= 16.51 Transcript Type= NA chr11 72002863 72041137 72002863 72041137 - transcript3975.chr11.nic@NUMA1 transcript3975.chr11.nic protein_coding 72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72010786,72009268,72008967,72008688,72007189,72006035,72005233,72004640,72004225,72003887,72002863 72041137,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72010854,72009387,72009185,72008845,72007435,72006263,72005369,72004816,72004341,72004099,72003538 Gene ID= ENSG00000137497.17 TPM= 24.41 Transcript Type= NA chr11 72002863 72041108 72002863 72041108 - transcript3981.chr11.nic@NUMA1 transcript3981.chr11.nic protein_coding 72040959,72035902,72029205,72024274,72023065,72022339,72021204,72019494,72018823,72018396,72018183,72017687,72016408,72012895,72010786,72009268,72008967,72007189,72006035,72005233,72004640,72004225,72003887,72002863 72041108,72035975,72029290,72024353,72023147,72022419,72021291,72019617,72018980,72018513,72018300,72017827,72016530,72016260,72010854,72009387,72009185,72008845,72006263,72005369,72004816,72004341,72004099,72003538 Gene ID= ENSG00000137497.17 TPM= 9.12 Transcript Type= NA chr11 72097292 72103387 72097292 72103387 - ENST00000278671.9@LAMTOR1 ENST00000278671.9 protein_coding 72103183,72099111,72098781,72098289,72097292 72103387,72099256,72098858,72098415,72097914 Gene ID= ENSG00000149357.9 TPM= 214.61 Transcript Type= protein_coding chr11 72109589 72112698 72109589 72112698 - transcript3999.chr11.nnic@ANAPC15 transcript3999.chr11.nnic protein_coding 72112650,72111412,72111157,72110544,72110088,72109881,72109589 72112698,72111496,72111286,72110603,72110225,72109928,72109798 Gene ID= ENSG00000110200.8 TPM= 1.81 Transcript Type= NA chr11 72109587 72112780 72109587 72112780 - ENST00000227618.8@ANAPC15 ENST00000227618.8 protein_coding 72112650,72111412,72111157,72110544,72110088,72109587 72112780,72111496,72111286,72110603,72110225,72109928 Gene ID= ENSG00000110200.8 TPM= 22.64 Transcript Type= protein_coding chr11 72109590 72112686 72109590 72112686 - ENST00000545944.5@ANAPC15 ENST00000545944.5 protein_coding 72112650,72111157,72110544,72110088,72109590 72112686,72111286,72110603,72110225,72109928 Gene ID= ENSG00000110200.8 TPM= 1.81 Transcript Type= protein_coding chr11 72109589 72112774 72109589 72112774 - ENST00000535234.5@ANAPC15 ENST00000535234.5 protein_coding 72112650,72111442,72111157,72110544,72110088,72109589 72112774,72111496,72111286,72110603,72110225,72109928 Gene ID= ENSG00000110200.8 TPM= 3.62 Transcript Type= protein_coding chr11 72109589 72112279 72109589 72112279 - ENST00000542531.5@ANAPC15 ENST00000542531.5 protein_coding 72112216,72111412,72111157,72110544,72110088,72109589 72112279,72111496,72111281,72110603,72110225,72109928 Gene ID= ENSG00000110200.8 TPM= 4.53 Transcript Type= protein_coding chr11 72109590 72112769 72109590 72112769 - ENST00000538393.5@ANAPC15 ENST00000538393.5 protein_coding 72112650,72111412,72111157,72110544,72110088,72109590 72112769,72111496,72111281,72110603,72110225,72109928 Gene ID= ENSG00000110200.8 TPM= 3.62 Transcript Type= protein_coding chr11 72216601 72221950 72216601 72221950 + ENST00000449475.6@FOLR2 ENST00000449475.6 protein_coding 72216601,72218561,72220870,72221176,72221533 72216925,72218734,72221058,72221311,72221950 Gene ID= ENSG00000165457.13 TPM= 2.72 Transcript Type= protein_coding chr11 72223843 72239142 72223843 72239142 + transcript4025.chr11.nic@INPPL1 transcript4025.chr11.nic protein_coding 72223843,72224780,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263 72223960,72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239142 Gene ID= ENSG00000165458.13 TPM= 56.42 Transcript Type= NA chr11 72223869 72239142 72223869 72239142 + transcript4031.chr11.nnic@INPPL1 transcript4031.chr11.nnic protein_coding 72223869,72224780,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263 72224184,72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239142 Gene ID= ENSG00000165458.13 TPM= 10.24 Transcript Type= NA chr11 72224781 72239105 72224781 72239105 + ENST00000298229.6@INPPL1 ENST00000298229.6 protein_coding 72224781,72228190,72228348,72228727,72229090,72229465,72229663,72229924,72230121,72230362,72230796,72230993,72231498,72232240,72232626,72232875,72233075,72233441,72233655,72234281,72234527,72235116,72235296,72235675,72235846,72237124,72238042,72238263 72225166,72228253,72228498,72228847,72229230,72229558,72229752,72230019,72230271,72230468,72230898,72231189,72231615,72232336,72232764,72232974,72233163,72233522,72233744,72234394,72234615,72235203,72235451,72235753,72235986,72237796,72238175,72239105 Gene ID= ENSG00000165458.13 TPM= 8.29 Transcript Type= protein_coding chr11 72292425 72434648 72292425 72434648 - ENST00000294053.7@CLPB ENST00000294053.7 protein_coding 72434072,72430312,72402966,72380281,72372925,72358880,72329707,72317106,72308527,72307199,72302304,72301803,72295492,72294620,72294325,72294022,72292425 72434648,72430363,72403052,72380384,72373014,72359008,72329804,72317220,72308604,72307254,72302348,72301964,72295648,72294693,72294444,72294126,72293615 Gene ID= ENSG00000162129.12 TPM= 1.36 Transcript Type= protein_coding chr11 72292446 72434597 72292446 72434597 - ENST00000538039.5@CLPB ENST00000538039.5 protein_coding 72434072,72430312,72402966,72380281,72358880,72329707,72317106,72308527,72307199,72302304,72301803,72295492,72294620,72294325,72294022,72292446 72434597,72430363,72403052,72380384,72359008,72329804,72317220,72308604,72307254,72302348,72301964,72295648,72294693,72294444,72294126,72293615 Gene ID= ENSG00000162129.12 TPM= 55.69 Transcript Type= protein_coding chr11 72576142 72642460 72576142 72642460 - ENST00000444035.6@PDE2A ENST00000444035.6 protein_coding 72642254,72631078,72608662,72605138,72597510,72596593,72591297,72590427,72590192,72589907,72589751,72589175,72588784,72586070,72585554,72585371,72584872,72584551,72584201,72583438,72582444,72581877,72581357,72580886,72580577,72579534,72579284,72578897,72578476,72578233,72576142 72642460,72631139,72608751,72605226,72597619,72596648,72591356,72590580,72590244,72589981,72589792,72589240,72588914,72586181,72585593,72585434,72584944,72584728,72584313,72583515,72582566,72581947,72581479,72580973,72580624,72579608,72579383,72579009,72578514,72578339,72577594 Gene ID= ENSG00000186642.15 TPM= 102.64 Transcript Type= protein_coding chr11 72685075 72752462 72685075 72752462 - transcript4084.chr11.nic@ARAP1 transcript4084.chr11.nic protein_coding 72752328,72732515,72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72688455,72687688,72687439,72686042,72685075 72752462,72732597,72727172,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72688537,72687738,72687502,72686191,72685681 Gene ID= ENSG00000186635.14 TPM= 52.05 Transcript Type= NA chr11 72685075 72722358 72685075 72722358 - ENST00000334211.12@ARAP1 ENST00000334211.12 protein_coding 72721850,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72692753,72688455,72687688,72687439,72686042,72685075 72722358,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72692785,72688537,72687738,72687502,72686191,72685681 Gene ID= ENSG00000186635.14 TPM= 3.37 Transcript Type= protein_coding chr11 72685075 72752461 72685075 72752461 - transcript4089.chr11.nnic@ARAP1 transcript4089.chr11.nnic protein_coding 72752328,72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72688455,72687688,72687439,72686042,72685075 72752461,72727172,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72688537,72687738,72687502,72686191,72685681 Gene ID= ENSG00000186635.14 TPM= 40.28 Transcript Type= NA chr11 72685075 72722359 72685075 72722359 - transcript4102.chr11.nic@ARAP1 transcript4102.chr11.nic protein_coding 72721850,72714152,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72688455,72687688,72687439,72686042,72685075 72722359,72714321,72713243,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72688537,72687738,72687502,72686191,72685681 Gene ID= ENSG00000186635.14 TPM= 16.13 Transcript Type= NA chr11 72685075 72752403 72685075 72752403 - ENST00000393609.7@ARAP1 ENST00000393609.7 protein_coding 72752328,72732515,72726620,72714152,72713176,72712438,72712196,72711430,72711021,72710385,72709870,72707175,72705805,72704152,72702905,72701649,72699417,72699005,72697911,72697598,72697323,72696983,72696549,72695718,72695542,72695387,72694980,72693692,72693325,72692753,72688455,72687688,72687439,72686042,72685075 72752403,72732597,72727172,72714321,72713243,72712568,72712339,72711499,72711141,72710587,72709976,72707374,72705890,72704334,72703079,72701783,72699552,72699107,72698106,72697649,72697486,72697195,72696654,72695865,72695628,72695455,72695097,72693805,72693470,72692785,72688537,72687738,72687502,72686191,72685681 Gene ID= ENSG00000186635.14 TPM= 2.46 Transcript Type= protein_coding chr11 72754728 72781931 72754728 72781931 - transcript4135.chr11.nic@STARD10 transcript4135.chr11.nic protein_coding 72781664,72780975,72759234,72758530,72755701,72754728 72781931,72781294,72759381,72758633,72755753,72755142 Gene ID= ENSG00000214530.8 TPM= 11.77 Transcript Type= NA chr11 72814368 72829647 72814368 72829647 + transcript4167.chr11.nic@ATG16L2 transcript4167.chr11.nic protein_coding 72814368,72816728,72817756,72821668,72822044,72822478,72822848,72824060,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72822543,72822961,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829647 Gene ID= ENSG00000168010.10 TPM= 12.74 Transcript Type= NA chr11 72814432 72829647 72814432 72829647 + transcript4172.chr11.nic@ATG16L2 transcript4172.chr11.nic protein_coding 72814432,72816728,72817756,72821668,72822044,72822478,72822848,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72822543,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829647 Gene ID= ENSG00000168010.10 TPM= 3.69 Transcript Type= NA chr11 72814393 72829647 72814393 72829647 + transcript4178.chr11.nic@ATG16L2 transcript4178.chr11.nic protein_coding 72814393,72816728,72817756,72821199,72822044,72822478,72822848,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72822543,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829647 Gene ID= ENSG00000168010.10 TPM= 4.59 Transcript Type= NA chr11 72814387 72829647 72814387 72829647 + transcript4180.chr11.nic@ATG16L2 transcript4180.chr11.nic protein_coding 72814387,72816728,72817756,72821548,72822044,72822478,72822848,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72822543,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829647 Gene ID= ENSG00000168010.10 TPM= 3.69 Transcript Type= NA chr11 72814198 72829647 72814198 72829647 + transcript4193.chr11.nic@ATG16L2 transcript4193.chr11.nic protein_coding 72814198,72816728,72817756,72821199,72822044,72822478,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829647 Gene ID= ENSG00000168010.10 TPM= 6.85 Transcript Type= NA chr11 72814386 72829647 72814386 72829647 + transcript4198.chr11.nic@ATG16L2 transcript4198.chr11.nic protein_coding 72814386,72816728,72817756,72821668,72822044,72822478,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829647 Gene ID= ENSG00000168010.10 TPM= 9.57 Transcript Type= NA chr11 72814419 72829635 72814419 72829635 + ENST00000439504.6@ATG16L2 ENST00000439504.6 protein_coding 72814419,72816728,72817756,72821668,72822044,72822478,72822848,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72814563,72816827,72817855,72821741,72822295,72822543,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829635 Gene ID= ENSG00000168010.10 TPM= 29.95 Transcript Type= retained_intron chr11 72822341 72829612 72822341 72829612 + ENST00000541367.5@ATG16L2 ENST00000541367.5 protein_coding 72822341,72822848,72824060,72824734,72825302,72826173,72826518,72826703,72827188,72828359,72828729,72828883,72829303 72822543,72822961,72824122,72824842,72825407,72826243,72826589,72826823,72827293,72828508,72828776,72828984,72829612 Gene ID= ENSG00000168010.10 TPM= 4.98 Transcript Type= protein_coding chr11 73155052 73182894 73155052 73182894 - transcript4213.chr11.nnic@NA transcript4213.chr11.nnic NA 73182790,73162540,73155052 73182894,73162671,73158013 Gene ID= novel_gene_chr11_4214 TPM= 2.72 Transcript Type= NA chr11 73218298 73235932 73218298 73235932 + ENST00000393597.6@P2RY2 ENST00000393597.6 protein_coding 73218298,73227981,73234156 73218432,73228175,73235932 Gene ID= ENSG00000175591.11 TPM= 3.62 Transcript Type= protein_coding chr11 73376264 73397472 73376264 73397472 + ENST00000064780.6@RELT ENST00000064780.6 protein_coding 73376264,73389112,73390551,73390755,73391144,73392211,73393837,73394236,73394477,73395087,73395444 73376499,73389181,73390625,73390921,73391223,73392468,73393917,73394317,73394734,73395285,73397472 Gene ID= ENSG00000054967.12 TPM= 8.15 Transcript Type= protein_coding chr11 73647549 73662819 73647549 73662819 + ENST00000227214.10@PLEKHB1 ENST00000227214.10 protein_coding 73647549,73649012,73650553,73651788,73652975,73660753,73661466 73647738,73649087,73650705,73651890,73653014,73660852,73662819 Gene ID= ENSG00000021300.13 TPM= 2.72 Transcript Type= protein_coding chr11 73675892 73761079 73675892 73761079 - transcript4234.chr11.nnic@RAB6A transcript4234.chr11.nnic protein_coding 73760566,73730765,73720846,73718785,73716251,73707420,73679832,73679654,73675892 73761079,73730823,73720899,73718890,73716362,73707513,73679927,73679720,73677962 Gene ID= ENSG00000175582.19 TPM= 7.24 Transcript Type= NA chr11 73675892 73761148 73675892 73761148 - transcript4239.chr11.nnic@RAB6A transcript4239.chr11.nnic protein_coding 73760566,73730765,73720846,73718785,73716251,73707420,73679654,73675892 73761148,73730823,73720899,73718890,73716362,73707513,73679746,73677962 Gene ID= ENSG00000175582.19 TPM= 7.24 Transcript Type= NA chr11 73675638 73761137 73675638 73761137 - ENST00000310653.10@RAB6A ENST00000310653.10 protein_coding 73760566,73730765,73720846,73718785,73716251,73707420,73679654,73675638 73761137,73730823,73720899,73718890,73716362,73707513,73679720,73677962 Gene ID= ENSG00000175582.19 TPM= 57.05 Transcript Type= protein_coding chr11 73675896 73761091 73675896 73761091 - ENST00000336083.7@RAB6A ENST00000336083.7 protein_coding 73760566,73730765,73720846,73718613,73716251,73707420,73679654,73675896 73761091,73730823,73720899,73718718,73716362,73707513,73679720,73677962 Gene ID= ENSG00000175582.19 TPM= 16.3 Transcript Type= protein_coding chr11 73872667 73876988 73872667 73876988 - ENST00000355693.4@COA4 ENST00000355693.4 protein_coding 73876757,73872667 73876988,73873394 Gene ID= ENSG00000181924.6 TPM= 75.16 Transcript Type= protein_coding chr11 73876996 73927740 73876996 73927740 + transcript4259.chr11.nic@PAAF1 transcript4259.chr11.nic protein_coding 73876996,73878779,73887354,73891112,73899146,73900311,73909399,73914413,73916545,73918950,73924615,73927285 73877068,73878819,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927740 Gene ID= ENSG00000175575.12 TPM= 2.11 Transcript Type= NA chr11 73876999 73927734 73876999 73927734 + transcript4260.chr11.nnic@PAAF1 transcript4260.chr11.nnic protein_coding 73876999,73878779,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73927285 73877068,73878819,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73927734 Gene ID= ENSG00000175575.12 TPM= 3.02 Transcript Type= NA chr11 73876974 73880703 73876974 73880703 + ENST00000381783.4@PAAF1 ENST00000381783.4 protein_coding 73876974,73878779 73877068,73880703 Gene ID= ENSG00000175575.12 TPM= 1.81 Transcript Type= retained_intron chr11 73876997 73927728 73876997 73927728 + ENST00000536003.5@PAAF1 ENST00000536003.5 protein_coding 73876997,73878779,73887031,73887354,73891112,73899146,73900270,73909399,73914413,73916545,73918950,73924615,73927285 73877068,73878819,73887099,73887457,73891201,73899244,73900420,73909593,73914504,73916660,73919032,73924697,73927728 Gene ID= ENSG00000175575.12 TPM= 1.2 Transcript Type= protein_coding chr11 74012714 74171019 74012714 74171019 - ENST00000334126.11@C2CD3 ENST00000334126.11 protein_coding 74170738,74168344,74161399,74139605,74138720,74133425,74132844,74122988,74118228,74114384,74113780,74109034,74106371,74103131,74100525,74098009,74095228,74093816,74092416,74090813,74085618,74084881,74078115,74074253,74057406,74054607,74049337,74048205,74042054,74037478,74033351,74028287,74012714 74171019,74168613,74161556,74139828,74138967,74133557,74132972,74123135,74118382,74114593,74113892,74109152,74106493,74103625,74100676,74098255,74095408,74093999,74092588,74090936,74085886,74084970,74078717,74074600,74057544,74054671,74049542,74048338,74042218,74037698,74034278,74028398,74013525 Gene ID= ENSG00000168014.16 TPM= 7.24 Transcript Type= protein_coding chr11 74128568 74170998 74128568 74170998 - transcript4276.chr11.nnic@C2CD3 transcript4276.chr11.nnic protein_coding 74170738,74168344,74161399,74139605,74138720,74133425,74132844,74128568 74170998,74168613,74161556,74139828,74138967,74133557,74132972,74129792 Gene ID= ENSG00000168014.16 TPM= 2.72 Transcript Type= NA chr11 74171099 74254703 74171099 74254703 + ENST00000328257.12@PPME1 ENST00000328257.12 protein_coding 74171099,74203728,74204353,74222312,74225205,74230245,74230912,74235901,74239133,74246076,74247079,74250954,74251648,74253492 74171522,74203821,74204445,74222369,74225256,74230399,74231002,74235966,74239256,74246205,74247123,74251018,74251715,74254703 Gene ID= ENSG00000214517.9 TPM= 126.48 Transcript Type= protein_coding chr11 74171322 74254703 74171322 74254703 + ENST00000398427.6@PPME1 ENST00000398427.6 protein_coding 74171322,74203728,74204353,74222312,74225205,74230245,74230912,74235901,74239133,74246034,74247079,74250954,74251648,74253492 74171522,74203821,74204445,74222369,74225256,74230399,74231002,74235966,74239256,74246205,74247123,74251018,74251715,74254703 Gene ID= ENSG00000214517.9 TPM= 3.32 Transcript Type= protein_coding chr11 74266655 74311657 74266655 74311657 - ENST00000331597.8@P4HA3 ENST00000331597.8 protein_coding 74311412,74304270,74302369,74298212,74289079,74286228,74285809,74279388,74276985,74273545,74269652,74268145,74266655 74311657,74304412,74302592,74298361,74289130,74286391,74285985,74279452,74277144,74273607,74269720,74268241,74267318 Gene ID= ENSG00000149380.11 TPM= 3.62 Transcript Type= protein_coding chr11 74330318 74398473 74330318 74398473 - ENST00000298198.4@PGM2L1 ENST00000298198.4 protein_coding 74398051,74374415,74371711,74370902,74368492,74351383,74347148,74346732,74345469,74343323,74342885,74342461,74338468,74330318 74398473,74374582,74371817,74370986,74368575,74351576,74347337,74346829,74345649,74343416,74343014,74342650,74338601,74336754 Gene ID= ENSG00000165434.7 TPM= 24.45 Transcript Type= protein_coding chr11 74491843 74493733 74491843 74493733 - ENST00000310109.4@LIPT2 ENST00000310109.4 protein_coding 74493238,74491843 74493733,74492364 Gene ID= ENSG00000175536.6 TPM= 1.81 Transcript Type= protein_coding chr11 74493366 74498533 74493366 74498533 + ENST00000526036.1@AP001372.2 ENST00000526036.1 bidirectional_promoter_lncRNA 74493366,74496649 74493973,74498533 Gene ID= ENSG00000254837.2 TPM= 5.43 Transcript Type= bidirectional_promoter_lncRNA chr11 74592530 74643057 74592530 74643057 + ENST00000263681.6@POLD3 ENST00000263681.6 protein_coding 74592530,74594061,74604692,74611499,74612878,74618537,74620017,74625408,74629217,74634583,74636197,74640564 74592718,74594116,74604794,74611538,74613010,74618804,74620089,74625573,74629323,74634695,74636275,74643057 Gene ID= ENSG00000077514.8 TPM= 10.87 Transcript Type= protein_coding chr11 74949247 74979031 74949247 74979031 + ENST00000263672.10@SPCS2 ENST00000263672.10 protein_coding 74949247,74965034,74965763,74969565,74976857 74949399,74965117,74965923,74969699,74979031 Gene ID= ENSG00000118363.11 TPM= 165.71 Transcript Type= protein_coding chr11 75150987 75206549 75150987 75206549 + ENST00000289575.9@SLCO2B1 ENST00000289575.9 protein_coding 75150987,75162655,75163963,75165787,75169173,75169666,75172379,75188136,75193218,75196514,75200224,75202901,75203307,75204400 75151397,75162785,75164100,75165949,75169406,75169764,75172569,75188238,75193575,75196679,75200387,75202965,75203427,75206549 Gene ID= ENSG00000137491.14 TPM= 178.92 Transcript Type= protein_coding chr11 75265599 75351705 75265599 75351705 - ENST00000360025.7@ARRB1 ENST00000360025.7 protein_coding 75351588,75290009,75287315,75284235,75283287,75281962,75281075,75278609,75277364,75276839,75274074,75272895,75268889,75267652,75265599 75351705,75290039,75287375,75284279,75283483,75282021,75281142,75278744,75277448,75276911,75274211,75272978,75268959,75267703,75266274 Gene ID= ENSG00000137486.16 TPM= 2.72 Transcript Type= protein_coding chr11 75399486 75406913 75399486 75406913 + ENST00000531188.5@RPS3 ENST00000531188.5 protein_coding 75399486,75400694,75401640,75402352,75404020,75404672,75405614 75399577,75400824,75401733,75402446,75404207,75404868,75406913 Gene ID= ENSG00000149273.14 TPM= 668.52 Transcript Type= protein_coding chr11 75399531 75422280 75399531 75422280 + ENST00000527446.5@RPS3 ENST00000527446.5 protein_coding 75399531,75400694,75401640,75402352,75404020,75404672,75421727 75399577,75400824,75401733,75402446,75404207,75404868,75422280 Gene ID= ENSG00000149273.14 TPM= 6.34 Transcript Type= protein_coding chr11 75399530 75405692 75399530 75405692 + ENST00000532872.5@RPS3 ENST00000532872.5 protein_coding 75399530,75400694,75401640,75404020,75404672,75405614 75399577,75400824,75401733,75404207,75404868,75405692 Gene ID= ENSG00000149273.14 TPM= 4.3 Transcript Type= nonsense_mediated_decay chr11 75399519 75405692 75399519 75405692 + ENST00000530721.5@RPS3 ENST00000530721.5 protein_coding 75399519,75400694,75401640,75402352,75404020,75404672,75405614 75399577,75400777,75401733,75402446,75404207,75404868,75405692 Gene ID= ENSG00000149273.14 TPM= 4.75 Transcript Type= nonsense_mediated_decay chr11 75434638 75525985 75434638 75525985 - transcript4327.chr11.nic@GDPD5 transcript4327.chr11.nic protein_coding 75525210,75490237,75479244,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434638 75525985,75490320,75479488,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655 Gene ID= ENSG00000158555.14 TPM= 3.17 Transcript Type= NA chr11 75434638 75463487 75434638 75463487 - transcript4333.chr11.nnic@GDPD5 transcript4333.chr11.nnic protein_coding 75463342,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434638 75463487,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655 Gene ID= ENSG00000158555.14 TPM= 1.81 Transcript Type= NA chr11 75434638 75451581 75434638 75451581 - transcript4335.chr11.nic@GDPD5 transcript4335.chr11.nic protein_coding 75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434638 75451581,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655 Gene ID= ENSG00000158555.14 TPM= 1.81 Transcript Type= NA chr11 75434640 75525903 75434640 75525903 - ENST00000336898.7@GDPD5 ENST00000336898.7 protein_coding 75525210,75490237,75477619,75462786,75457693,75456757,75449885,75449517,75448977,75444413,75443136,75442363,75441646,75441163,75439879,75436936,75434640 75525903,75490320,75477795,75462889,75457786,75456816,75449983,75449610,75449122,75444495,75443286,75442581,75441803,75441310,75439961,75437048,75435655 Gene ID= ENSG00000158555.14 TPM= 25.81 Transcript Type= protein_coding chr11 75562086 75572783 75562086 75572783 + ENST00000358171.7@SERPINH1 ENST00000358171.7 protein_coding 75562086,75566316,75568731,75568939,75571781 75562319,75566971,75568829,75569171,75572783 Gene ID= ENSG00000149257.13 TPM= 310.6 Transcript Type= protein_coding chr11 75586918 75669120 75586918 75669120 - ENST00000304771.7@MAP6 ENST00000304771.7 protein_coding 75667465,75608109,75605808,75586918 75669120,75608322,75606004,75588184 Gene ID= ENSG00000171533.11 TPM= 32.6 Transcript Type= protein_coding chr11 75768732 75801534 75768732 75801534 + ENST00000228027.11@DGAT2 ENST00000228027.11 protein_coding 75768732,75784618,75790188,75790661,75796328,75797158,75798227,75800354 75769112,75784746,75790295,75790731,75796532,75797332,75798429,75801534 Gene ID= ENSG00000062282.14 TPM= 14.49 Transcript Type= protein_coding chr11 75815167 76143195 75815167 76143195 + ENST00000356136.7@UVRAG ENST00000356136.7 protein_coding 75815167,75851883,75861746,75879879,75888829,75911954,75961444,75983387,76004005,76007534,76008807,76016815,76065710,76115924,76140711 75815524,75852000,75861780,75880040,75888903,75912039,75961549,75983513,76004089,76007621,76008867,76016980,76065788,76116015,76143195 Gene ID= ENSG00000198382.8 TPM= 39.84 Transcript Type= protein_coding chr11 76186410 76209544 76186410 76209544 - transcript4365.chr11.nnic@WNT11 transcript4365.chr11.nnic protein_coding 76208652,76206325,76196483,76194567,76191564,76186410 76209544,76206498,76196718,76194844,76191856,76187239 Gene ID= ENSG00000085741.12 TPM= 8.15 Transcript Type= NA chr11 76186327 76210760 76186327 76210760 - transcript4367.chr11.nic@WNT11 transcript4367.chr11.nic protein_coding 76210347,76206325,76196483,76194567,76191564,76186327 76210760,76206498,76196718,76194844,76191856,76187239 Gene ID= ENSG00000085741.12 TPM= 8.15 Transcript Type= NA chr11 76186396 76210952 76186396 76210952 - transcript4368.chr11.nnic@WNT11 transcript4368.chr11.nnic protein_coding 76210472,76206325,76196483,76194567,76191564,76186396 76210952,76206498,76196718,76194844,76191856,76187239 Gene ID= ENSG00000085741.12 TPM= 15.39 Transcript Type= NA chr11 76186327 76209544 76186327 76209544 - transcript4375.chr11.nnic@WNT11 transcript4375.chr11.nnic protein_coding 76206325,76196483,76194731,76191564,76186327 76209544,76196718,76194844,76191856,76187239 Gene ID= ENSG00000085741.12 TPM= 4.53 Transcript Type= NA chr11 76186325 76206532 76186325 76206532 - ENST00000322563.7@WNT11 ENST00000322563.7 protein_coding 76206325,76196483,76194567,76191564,76186325 76206532,76196718,76194844,76191856,76187239 Gene ID= ENSG00000085741.12 TPM= 93.27 Transcript Type= protein_coding chr11 76349959 76381132 76349959 76381132 - transcript4383.chr11.nnic@THAP12 transcript4383.chr11.nnic protein_coding 76380748,76365780,76360956,76355618,76349959 76381132,76365972,76361063,76355654,76352794 Gene ID= ENSG00000137492.7 TPM= 1.81 Transcript Type= NA chr11 76349959 76381098 76349959 76381098 - transcript4386.chr11.nnic@THAP12 transcript4386.chr11.nnic protein_coding 76380748,76365852,76360956,76349959 76381098,76365972,76361063,76352794 Gene ID= ENSG00000137492.7 TPM= 1.81 Transcript Type= NA chr11 76349956 76380942 76349956 76380942 - ENST00000260045.7@THAP12 ENST00000260045.7 protein_coding 76380748,76365852,76360956,76355618,76349956 76380942,76365972,76361063,76355654,76352794 Gene ID= ENSG00000137492.7 TPM= 28.98 Transcript Type= protein_coding chr11 76441338 76444574 76441338 76444574 - ENST00000530759.1@AP002360.2 ENST00000530759.1 lincRNA 76444278,76441338 76444574,76441639 Gene ID= ENSG00000255135.3 TPM= 1.81 Transcript Type= lincRNA chr11 76657523 76669958 76657523 76669958 - transcript4392.chr11.nic@LRRC32 transcript4392.chr11.nic protein_coding 76669762,76665871,76659583,76657523 76669958,76665958,76661508,76658034 Gene ID= ENSG00000137507.11 TPM= 4.53 Transcript Type= NA chr11 76657525 76670746 76657525 76670746 - transcript4400.chr11.nnic@LRRC32 transcript4400.chr11.nnic protein_coding 76670614,76665848,76657525 76670746,76665958,76661508 Gene ID= ENSG00000137507.11 TPM= 20.83 Transcript Type= NA chr11 76657527 76670747 76657527 76670747 - ENST00000404995.5@LRRC32 ENST00000404995.5 protein_coding 76670614,76665871,76659583,76657527 76670747,76665958,76661508,76658034 Gene ID= ENSG00000137507.11 TPM= 30.79 Transcript Type= protein_coding chr11 76657524 76670747 76657524 76670747 - ENST00000260061.9@LRRC32 ENST00000260061.9 protein_coding 76670614,76665871,76657524 76670747,76665958,76661508 Gene ID= ENSG00000137507.11 TPM= 111.38 Transcript Type= protein_coding chr11 76783239 76798154 76783239 76798154 + ENST00000333090.4@TSKU ENST00000333090.4 protein_coding 76783239,76795609 76783404,76798154 Gene ID= ENSG00000182704.7 TPM= 42.56 Transcript Type= protein_coding chr11 76860873 77026797 76860873 77026797 + ENST00000532485.5@ACER3 ENST00000532485.5 protein_coding 76860873,76926557,76958979,76976289,76985643,76990539,76998763,77015016,77016675,77019731,77020274 76861079,76926667,76959031,76976341,76985724,76990574,76998821,77015117,77016779,77019776,77026797 Gene ID= ENSG00000078124.11 TPM= 12.68 Transcript Type= protein_coding chr11 77066941 77126155 77066941 77126155 + ENST00000278559.7@CAPN5 ENST00000278559.7 protein_coding 77066941,77084852,77093682,77112589,77114242,77115395,77116226,77118157,77119030,77120713,77121934,77122576,77123688 77067094,77085051,77093813,77112797,77114434,77115588,77116303,77118352,77119152,77120909,77122049,77122712,77126155 Gene ID= ENSG00000149260.15 TPM= 28.07 Transcript Type= protein_coding chr11 77175231 77215242 77175231 77215242 + transcript4418.chr11.nic@MYO7A transcript4418.chr11.nic protein_coding 77175231,77177549,77179045,77179735,77180374,77181380,77181951,77182424,77183068,77184588,77189344,77190020,77190697,77192051,77194354,77197481,77198495,77199649,77201448,77202300,77203060,77204076,77205462,77206097,77207289,77208430,77208697,77211152,77211821,77212952,77213860,77214607 77175464,77177643,77179129,77179953,77180481,77181589,77182154,77182600,77183157,77184715,77189470,77190139,77190870,77192278,77194524,77197598,77198621,77199818,77201638,77202424,77203217,77204229,77205617,77206202,77207402,77208517,77208803,77211337,77211937,77213035,77213979,77215242 Gene ID= ENSG00000137474.19 TPM= 28.82 Transcript Type= NA chr11 77129916 77184991 77129916 77184991 + transcript4422.chr11.nnic@MYO7A transcript4422.chr11.nnic protein_coding 77129916,77130589,77142709,77147798,77155907,77156660,77156862,77157279,77158277,77159447,77160163,77160973,77162120,77162853,77166056,77172748,77174756,77175372,77177549,77179045,77179735,77180374,77181380,77181951,77182424,77183068,77184588 77129994,77130652,77142822,77147950,77156091,77156781,77157004,77157392,77158430,77159523,77160282,77161115,77162330,77162988,77166162,77172885,77174914,77175464,77177643,77179129,77179953,77180481,77181589,77182154,77182600,77183157,77184991 Gene ID= ENSG00000137474.19 TPM= 2.72 Transcript Type= NA chr11 77175231 77188412 77175231 77188412 + transcript4425.chr11.nic@MYO7A transcript4425.chr11.nic protein_coding 77175231,77177549,77179045,77179735,77180374,77181380,77181951,77182424,77183068,77184588 77175464,77177643,77179129,77179953,77180481,77181589,77182154,77182600,77183157,77188412 Gene ID= ENSG00000137474.19 TPM= 2.72 Transcript Type= NA chr11 77128264 77215238 77128264 77215238 + ENST00000409709.7@MYO7A ENST00000409709.7 protein_coding 77128264,77130589,77142709,77147798,77155907,77156660,77156862,77157279,77158277,77159447,77160163,77160973,77162120,77162853,77166056,77172748,77174756,77175372,77177549,77179045,77179735,77180374,77181380,77181951,77182424,77183068,77184588,77189344,77190020,77190697,77192051,77194354,77197481,77198495,77199535,77201448,77202300,77203060,77204076,77205462,77206097,77207289,77208430,77208697,77211152,77211821,77212952,77213860,77214607 77128489,77130652,77142822,77147950,77156091,77156781,77157004,77157392,77158430,77159523,77160282,77161115,77162330,77162988,77166162,77172885,77174914,77175464,77177643,77179129,77179953,77180481,77181589,77182154,77182600,77183157,77184715,77189470,77190139,77190870,77192278,77194524,77197598,77198621,77199818,77201638,77202424,77203217,77204229,77205617,77206202,77207402,77208517,77208803,77211337,77211937,77213035,77213979,77215238 Gene ID= ENSG00000137474.19 TPM= 10.71 Transcript Type= protein_coding chr11 77128270 77215238 77128270 77215238 + ENST00000458637.6@MYO7A ENST00000458637.6 protein_coding 77128270,77130589,77142709,77147798,77155907,77156660,77156862,77157279,77158277,77159447,77160163,77160973,77162120,77162853,77166056,77172748,77174756,77175372,77177549,77179045,77179735,77180374,77181380,77181951,77182424,77183068,77184588,77189344,77190020,77190697,77192051,77194354,77197481,77198495,77199649,77201448,77202300,77203060,77204076,77205462,77206097,77207289,77208430,77208697,77211152,77211821,77212952,77213860,77214607 77128489,77130652,77142822,77147950,77156091,77156781,77157004,77157392,77158430,77159523,77160282,77161115,77162330,77162988,77166162,77172885,77174914,77175464,77177643,77179129,77179953,77180481,77181589,77182154,77182600,77183157,77184715,77189470,77190139,77190870,77192278,77194524,77197598,77198621,77199818,77201638,77202424,77203217,77204229,77205617,77206202,77207402,77208517,77208803,77211337,77211931,77213035,77213979,77215238 Gene ID= ENSG00000137474.19 TPM= 12.07 Transcript Type= protein_coding chr11 77128270 77184996 77128270 77184996 + ENST00000409893.5@MYO7A ENST00000409893.5 protein_coding 77128270,77130589,77142709,77147798,77155907,77156660,77156862,77157279,77158277,77159447,77160163,77160973,77162120,77162853,77166056,77172748,77174756,77175372,77177549,77179045,77179735,77180374,77181380,77181951,77182424,77183068,77184588 77128489,77130652,77142822,77147950,77156091,77156781,77157004,77157392,77158430,77159523,77160282,77161115,77162330,77162988,77166162,77172885,77174914,77175464,77177643,77179129,77179953,77180481,77181589,77182154,77182600,77183157,77184996 Gene ID= ENSG00000137474.19 TPM= 5.43 Transcript Type= protein_coding chr11 77322017 77411988 77322017 77411988 - transcript4426.chr11.nic@PAK1 transcript4426.chr11.nic protein_coding 77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77325328,77322017 77411988,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77325376,77323360 Gene ID= ENSG00000149269.9 TPM= 2.72 Transcript Type= NA chr11 77321550 77411988 77321550 77411988 - transcript4432.chr11.nic@PAK1 transcript4432.chr11.nic protein_coding 77411774,77392331,77379894,77379241,77374328,77358898,77355668,77353536,77349239,77343819,77340646,77337324,77336086,77332730,77321550 77411988,77392541,77379994,77379388,77374365,77359017,77355842,77353599,77349287,77343931,77340763,77337423,77336282,77332867,77323360 Gene ID= ENSG00000149269.9 TPM= 28.98 Transcript Type= NA chr11 77659996 77821017 77659996 77821017 - ENST00000308488.10@RSF1 ENST00000308488.10 protein_coding 77820528,77764598,77747036,77740731,77725545,77700721,77698487,77693507,77691159,77685105,77683710,77678086,77676792,77675036,77672042,77659996 77821017,77764689,77747128,77740936,77725699,77702495,77698693,77693611,77691238,77685159,77683819,77678153,77676999,77675256,77672230,77667491 Gene ID= ENSG00000048649.13 TPM= 21.73 Transcript Type= protein_coding chr11 77821141 77872356 77821141 77872356 + transcript4459.chr11.nic@AAMDC transcript4459.chr11.nic protein_coding 77821141,77841019,77842479,77855345,77869722,77872175 77821241,77841060,77842628,77855482,77869817,77872356 Gene ID= ENSG00000087884.14 TPM= 5.43 Transcript Type= NA chr11 77821101 77872356 77821101 77872356 + transcript4461.chr11.nic@AAMDC transcript4461.chr11.nic protein_coding 77821101,77842479,77855345,77869722,77872175 77821241,77842628,77855482,77869817,77872356 Gene ID= ENSG00000087884.14 TPM= 5.66 Transcript Type= NA chr11 77821129 77872352 77821129 77872352 + ENST00000526415.5@AAMDC ENST00000526415.5 protein_coding 77821129,77841019,77842479,77869722,77872175 77821241,77841060,77842628,77869817,77872352 Gene ID= ENSG00000087884.14 TPM= 39.84 Transcript Type= protein_coding chr11 77821144 77872361 77821144 77872361 + ENST00000393427.6@AAMDC ENST00000393427.6 protein_coding 77821144,77842479,77869722,77872175 77821241,77842628,77869817,77872361 Gene ID= ENSG00000087884.14 TPM= 41.88 Transcript Type= protein_coding chr11 77821114 77900785 77821114 77900785 + ENST00000526164.5@AAMDC ENST00000526164.5 protein_coding 77821114,77842479,77869722,77884780,77900571 77821241,77842628,77869817,77884916,77900785 Gene ID= ENSG00000087884.14 TPM= 1.13 Transcript Type= nonsense_mediated_decay chr11 77878720 77994678 77878720 77994678 - ENST00000534064.5@INTS4 ENST00000534064.5 protein_coding 77994590,77991108,77981459,77978996,77960953,77960341,77958746,77955942,77941180,77938651,77928342,77924750,77922356,77921340,77918821,77907717,77903540,77901421,77894290,77891681,77891319,77883832,77878720 77994678,77991299,77981576,77979102,77961138,77960391,77958834,77956062,77941251,77938825,77928547,77924892,77922471,77921473,77918978,77907810,77903620,77901551,77894349,77891840,77891462,77883952,77879127 Gene ID= ENSG00000149262.16 TPM= 48.9 Transcript Type= protein_coding chr11 78015715 78023294 78015715 78023294 - ENST00000353172.5@KCTD14 ENST00000353172.5 protein_coding 78023160,78015715 78023294,78017270 Gene ID= ENSG00000151364.16 TPM= 40.75 Transcript Type= protein_coding chr11 78063861 78068351 78063861 78068351 + ENST00000281030.2@THRSP ENST00000281030.2 protein_coding 78063861,78067659 78064341,78068351 Gene ID= ENSG00000151365.2 TPM= 10.87 Transcript Type= protein_coding chr11 78068304 78080219 78068304 78080219 - ENST00000281031.4@NDUFC2 ENST00000281031.4 protein_coding 78079579,78072998,78068304 78080219,78073141,78070036 Gene ID= ENSG00000151366.12 TPM= 123.15 Transcript Type= protein_coding chr11 78100942 78139660 78100942 78139660 - ENST00000299626.9@ALG8 ENST00000299626.9 protein_coding 78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78100942 78139660,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78101195 Gene ID= ENSG00000159063.12 TPM= 21.73 Transcript Type= protein_coding chr11 78100947 78139592 78100947 78139592 - ENST00000376156.7@ALG8 ENST00000376156.7 protein_coding 78139494,78127358,78124021,78121065,78119182,78114266,78113886,78112650,78109442,78106807,78104356,78103980,78102874,78100947 78139592,78127436,78124214,78121174,78119249,78114392,78113989,78112770,78109581,78106946,78104453,78104052,78102948,78101195 Gene ID= ENSG00000159063.12 TPM= 13.58 Transcript Type= protein_coding chr11 78139757 78176208 78139757 78176208 + transcript4505.chr11.nic@KCTD21-AS1 transcript4505.chr11.nic antisense_RNA 78139757,78148977,78173400 78140072,78149093,78176208 Gene ID= ENSG00000246174.7 TPM= 2.26 Transcript Type= NA chr11 78139783 78176212 78139783 78176212 + transcript4506.chr11.nnic@KCTD21-AS1 transcript4506.chr11.nnic antisense_RNA 78139783,78141506,78173400 78140072,78141702,78176212 Gene ID= ENSG00000246174.7 TPM= 3.17 Transcript Type= NA chr11 78188953 78214707 78188953 78214707 + transcript4499.chr11.nnic@USP35 transcript4499.chr11.nnic protein_coding 78188953,78196236,78197936,78198583,78199595,78200133,78200650,78205842,78207530,78208857,78209448,78213646 78189157,78196918,78198068,78198718,78199724,78200234,78200808,78206035,78207623,78208963,78210744,78214707 Gene ID= ENSG00000118369.12 TPM= 3.17 Transcript Type= NA chr11 78188823 78215501 78188823 78215501 + transcript4500.chr11.nnic@USP35 transcript4500.chr11.nnic protein_coding 78188823,78196236,78197936,78199595,78200133,78200650,78205842,78207530,78208857,78209448,78213646,78214978 78189157,78196918,78198068,78199724,78200234,78200808,78206035,78207623,78208963,78210744,78213856,78215501 Gene ID= ENSG00000118369.12 TPM= 4.53 Transcript Type= NA chr11 78188907 78214711 78188907 78214711 + ENST00000529308.5@USP35 ENST00000529308.5 protein_coding 78188907,78196236,78197936,78199595,78200133,78200650,78205842,78207530,78208857,78209448,78213646 78189157,78196918,78198068,78199724,78200234,78200808,78206035,78207623,78208963,78210744,78214711 Gene ID= ENSG00000118369.12 TPM= 13.13 Transcript Type= protein_coding chr11 78215297 78417806 78215297 78417806 - ENST00000361507.4@GAB2 ENST00000361507.4 protein_coding 78417646,78280601,78250157,78226465,78225108,78223412,78222105,78221677,78220319,78215297 78417806,78280901,78250400,78227051,78225202,78223676,78222195,78221779,78220444,78219415 Gene ID= ENSG00000033327.12 TPM= 8.15 Transcript Type= protein_coding chr11 78435961 78574864 78435961 78574864 - ENST00000281038.9@NARS2 ENST00000281038.9 protein_coding 78574348,78571335,78568632,78566132,78559539,78528842,78493063,78478585,78478438,78469247,78465876,78443661,78441091,78435961 78574864,78571444,78568752,78566272,78559619,78528936,78493195,78478683,78478475,78469313,78466013,78443758,78441117,78436814 Gene ID= ENSG00000137513.9 TPM= 50.26 Transcript Type= protein_coding chr11 78435961 78574861 78435961 78574861 - transcript4512.chr11.nnic@NARS2 transcript4512.chr11.nnic protein_coding 78574348,78573411,78571335,78566132,78559539,78528842,78493063,78478585,78478438,78469247,78465876,78443661,78441091,78435961 78574861,78573528,78571444,78568752,78559619,78528936,78493195,78478683,78478475,78469313,78466013,78443758,78441117,78436814 Gene ID= ENSG00000137513.9 TPM= 2.26 Transcript Type= NA chr11 82824368 82900430 82824368 82900430 - ENST00000393399.6@PRCP ENST00000393399.6 protein_coding 82900235,82884823,82859977,82853177,82850324,82849914,82849049,82839261,82838387,82824368 82900430,82884885,82860117,82853278,82850505,82850071,82849218,82839425,82838574,82825122 Gene ID= ENSG00000137509.10 TPM= 11.77 Transcript Type= protein_coding chr11 83072078 83073598 83072078 83073598 + transcript4528.chr11.nic@RAB30-AS1 transcript4528.chr11.nic lincRNA 83072078,83072623,83073303 83072181,83072804,83073598 Gene ID= ENSG00000246067.7 TPM= 2.72 Transcript Type= NA chr11 83072066 83073646 83072066 83073646 + ENST00000501011.6@RAB30-AS1 ENST00000501011.6 lincRNA 83072066,83072623,83073303 83072146,83072804,83073646 Gene ID= ENSG00000246067.7 TPM= 8.15 Transcript Type= lincRNA chr11 83156988 83187451 83156988 83187451 + ENST00000298281.8@PCF11 ENST00000298281.8 protein_coding 83156988,83161327,83163679,83164207,83165600,83167125,83167415,83168428,83171818,83177085,83177714,83181008,83181854,83182399,83183038,83184679 83157631,83161452,83163867,83164401,83166714,83167308,83167505,83169995,83171914,83177204,83177819,83181191,83182009,83182491,83183073,83187451 Gene ID= ENSG00000165494.11 TPM= 7.24 Transcript Type= protein_coding chr11 83193771 83256098 83193771 83256098 + transcript4534.chr11.nic@ANKRD42 transcript4534.chr11.nic protein_coding 83193771,83198479,83206058,83210300,83211295,83224855,83227747,83236404,83240759,83245498,83247943,83255845 83194034,83198642,83206165,83210419,83211430,83225055,83227872,83236509,83240934,83245624,83248087,83256098 Gene ID= ENSG00000137494.13 TPM= 2.72 Transcript Type= NA chr11 83225171 83257982 83225171 83257982 + transcript4562.chr11.nnic@ANKRD42 transcript4562.chr11.nnic protein_coding 83225171,83225697,83257833 83225557,83225778,83257982 Gene ID= ENSG00000137494.13 TPM= 22.64 Transcript Type= NA chr11 83193739 83215200 83193739 83215200 + ENST00000393389.7@ANKRD42 ENST00000393389.7 protein_coding 83193739,83198479,83206058,83210300,83211295,83212653 83194728,83198642,83206165,83210419,83211430,83215200 Gene ID= ENSG00000137494.13 TPM= 16.3 Transcript Type= protein_coding chr11 83259097 83286407 83259097 83286407 - ENST00000529689.5@CCDC90B ENST00000529689.5 protein_coding 83285873,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83259097 83286407,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966 Gene ID= ENSG00000137500.9 TPM= 48.9 Transcript Type= protein_coding chr11 83261456 83286351 83261456 83286351 - ENST00000525503.5@CCDC90B ENST00000525503.5 protein_coding 83285553,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261456 83286351,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966 Gene ID= ENSG00000137500.9 TPM= 16.3 Transcript Type= protein_coding chr11 83261462 83285998 83261462 83285998 - ENST00000529611.5@CCDC90B ENST00000529611.5 protein_coding 83285127,83280141,83278726,83274639,83273951,83273793,83273647,83265865,83261462 83285998,83280260,83278829,83274740,83273992,83273864,83273700,83265979,83261966 Gene ID= ENSG00000137500.9 TPM= 4.53 Transcript Type= protein_coding chr11 83455159 84317394 83455159 84317394 - transcript4566.chr11.nic@DLG2 transcript4566.chr11.nic protein_coding 84316825,84251238,84163461,84098923,84059315,83980506,83965324,83962885,83874420,83833614,83786690,83633211,83541682,83532708,83484129,83472727,83471626,83469201,83466708,83462002,83455159 84317394,84251291,84163511,84099047,84059484,83980642,83965468,83963023,83874488,83833770,83786792,83633325,83541858,83532783,83484228,83472777,83471727,83469373,83466817,83462093,83459924 Gene ID= ENSG00000150672.16 TPM= 4.53 Transcript Type= NA chr11 85628573 85636539 85628573 85636539 + ENST00000393375.5@TMEM126B ENST00000393375.5 protein_coding 85628573,85631145,85631687,85634086,85635667,85636046 85628688,85631316,85631808,85634279,85635778,85636539 Gene ID= ENSG00000171204.12 TPM= 23.54 Transcript Type= protein_coding chr11 85628585 85636502 85628585 85636502 + ENST00000358867.10@TMEM126B ENST00000358867.10 protein_coding 85628585,85631687,85634086,85635667,85636046 85628688,85631808,85634279,85635778,85636502 Gene ID= ENSG00000171204.12 TPM= 7.24 Transcript Type= protein_coding chr11 85647988 85656543 85647988 85656543 + ENST00000304511.6@TMEM126A ENST00000304511.6 protein_coding 85647988,85650249,85654063,85655594,85656309 85648089,85650341,85654256,85655708,85656543 Gene ID= ENSG00000171202.6 TPM= 8.15 Transcript Type= protein_coding chr11 85659723 85665129 85659723 85665129 - transcript4584.chr11.nnic@CREBZF transcript4584.chr11.nnic protein_coding 85663815,85663524,85663179,85659723 85665129,85663601,85663293,85662457 Gene ID= ENSG00000137504.13 TPM= 2.11 Transcript Type= NA chr11 85659143 85665129 85659143 85665129 - transcript4585.chr11.nic@CREBZF transcript4585.chr11.nic protein_coding 85663815,85663524,85659143 85665129,85663601,85662457 Gene ID= ENSG00000137504.13 TPM= 23.84 Transcript Type= NA chr11 85659708 85665102 85659708 85665102 - ENST00000490820.2@CREBZF ENST00000490820.2 protein_coding 85663524,85659708 85665102,85662457 Gene ID= ENSG00000137504.13 TPM= 20.22 Transcript Type= nonsense_mediated_decay chr11 85694224 85811159 85694224 85811159 - ENST00000389960.8@SYTL2 ENST00000389960.8 protein_coding 85810954,85757625,85748272,85745637,85737575,85736501,85733939,85727896,85720858,85718790,85717483,85714413,85709331,85707429,85704858,85700515,85697979,85696183,85694224 85811159,85758114,85748423,85745772,85737656,85736612,85734742,85727967,85720959,85718843,85717530,85714507,85709500,85707531,85705028,85700593,85698078,85696388,85695340 Gene ID= ENSG00000137501.17 TPM= 1.81 Transcript Type= protein_coding chr11 85957510 86069117 85957510 86069117 - transcript4591.chr11.nic@PICALM transcript4591.chr11.nic protein_coding 86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957510 86069117,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990399,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85959060 Gene ID= ENSG00000073921.17 TPM= 2.47 Transcript Type= NA chr11 85957510 86069117 85957510 86069117 - transcript4595.chr11.nic@PICALM transcript4595.chr11.nic protein_coding 86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957510 86069117,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85981988,85981775,85981228,85978093,85976682,85974812,85959060 Gene ID= ENSG00000073921.17 TPM= 18.77 Transcript Type= NA chr11 85957684 86069059 85957684 86069059 - ENST00000532317.5@PICALM ENST00000532317.5 protein_coding 86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85983866,85981872,85981745,85981129,85978070,85976623,85974708,85957684 86069059,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85983973,85982003,85981775,85981228,85978093,85976682,85974812,85959060 Gene ID= ENSG00000073921.17 TPM= 30.25 Transcript Type= protein_coding chr11 85957688 86069097 85957688 86069097 - ENST00000526033.5@PICALM ENST00000526033.5 protein_coding 86068651,86031469,86026292,86022367,86014870,86012281,86011030,86007542,86003366,86001035,86000643,85996826,85990250,85983866,85981872,85981745,85981129,85976623,85974708,85957688 86069097,86031611,86026367,86022469,86014963,86012392,86011136,86007583,86003451,86001158,86000779,85996929,85990378,85983973,85982003,85981775,85981228,85976682,85974812,85959060 Gene ID= ENSG00000073921.17 TPM= 1.27 Transcript Type= protein_coding chr11 86244544 86278736 86244544 86278736 + ENST00000263360.10@EED ENST00000263360.10 protein_coding 86244544,86250296,86252148,86255222,86256387,86257515,86264172,86266083,86268456,86276980,86277918,86278399 86245343,86250448,86252240,86255287,86256512,86257596,86264263,86266216,86268561,86277138,86277991,86278736 Gene ID= ENSG00000074266.19 TPM= 14.49 Transcript Type= protein_coding chr11 86302232 86345665 86302232 86345665 + transcript4606.chr11.nic@HIKESHI transcript4606.chr11.nic protein_coding 86302232,86306245,86337379,86344603,86345094,86345584 86302478,86306482,86337530,86344721,86345198,86345665 Gene ID= ENSG00000149196.15 TPM= 3.62 Transcript Type= NA chr11 86302223 86345931 86302223 86345931 + ENST00000278483.7@HIKESHI ENST00000278483.7 protein_coding 86302223,86306245,86337379,86344603,86345584 86302478,86306482,86337530,86344721,86345931 Gene ID= ENSG00000149196.15 TPM= 24.45 Transcript Type= protein_coding chr11 86441100 86672169 86441100 86672169 - transcript4621.chr11.nnic@ME3 transcript4621.chr11.nnic protein_coding 86672120,86671762,86559690,86556553,86508792,86503195,86497963,86487337,86465091,86457366,86450301,86449889,86448150,86447065,86446314,86442821,86441100 86672169,86671958,86559823,86556702,86508867,86503295,86498124,86487440,86465200,86457759,86450398,86450002,86448255,86447207,86446487,86442919,86441440 Gene ID= ENSG00000151376.16 TPM= 2.72 Transcript Type= NA chr11 86441100 86672177 86441100 86672177 - transcript4625.chr11.nnic@ME3 transcript4625.chr11.nnic protein_coding 86671762,86559690,86556553,86508792,86497963,86487337,86465091,86464044,86457366,86450301,86449889,86448150,86447065,86446314,86442821,86441100 86672177,86559823,86556702,86508867,86498124,86487440,86465200,86464128,86457759,86450398,86450002,86448255,86447207,86446487,86442919,86441440 Gene ID= ENSG00000151376.16 TPM= 1.81 Transcript Type= NA chr11 86441100 86672457 86441100 86672457 - transcript4627.chr11.nic@ME3 transcript4627.chr11.nic protein_coding 86672274,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86457366,86450301,86449889,86448150,86447065,86446314,86442821,86441100 86672457,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86457759,86450398,86450002,86448255,86447207,86446487,86442919,86441440 Gene ID= ENSG00000151376.16 TPM= 3.62 Transcript Type= NA chr11 86441100 86672177 86441100 86672177 - transcript4633.chr11.nic@ME3 transcript4633.chr11.nic protein_coding 86671762,86559690,86556553,86508792,86497963,86487337,86465091,86457366,86450301,86449889,86448150,86447065,86446314,86442821,86441100 86672177,86559823,86556702,86508867,86498124,86487440,86465200,86457759,86450398,86450002,86448255,86447207,86446487,86442919,86441440 Gene ID= ENSG00000151376.16 TPM= 3.62 Transcript Type= NA chr11 86441100 86672480 86441100 86672480 - transcript4635.chr11.nic@ME3 transcript4635.chr11.nic protein_coding 86672298,86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441100 86672480,86671958,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440 Gene ID= ENSG00000151376.16 TPM= 3.62 Transcript Type= NA chr11 86643997 86672169 86643997 86672169 - transcript4642.chr11.nnic@ME3 transcript4642.chr11.nnic protein_coding 86672120,86671762,86643997 86672169,86671958,86645945 Gene ID= ENSG00000151376.16 TPM= 2.72 Transcript Type= NA chr11 86643997 86672399 86643997 86672399 - transcript4643.chr11.nnic@ME3 transcript4643.chr11.nnic protein_coding 86672274,86671762,86643997 86672399,86671958,86645945 Gene ID= ENSG00000151376.16 TPM= 3.62 Transcript Type= NA chr11 86643997 86672391 86643997 86672391 - transcript4644.chr11.nnic@ME3 transcript4644.chr11.nnic protein_coding 86672324,86671762,86643997 86672391,86671958,86645945 Gene ID= ENSG00000151376.16 TPM= 5.43 Transcript Type= NA chr11 86441108 86672198 86441108 86672198 - ENST00000393324.7@ME3 ENST00000393324.7 protein_coding 86671762,86559690,86556553,86508792,86497963,86487337,86465091,86450301,86449889,86448150,86447065,86446314,86442821,86441108 86672198,86559823,86556702,86508867,86498124,86487440,86465200,86450398,86450002,86448255,86447207,86446487,86442919,86441440 Gene ID= ENSG00000151376.16 TPM= 26.26 Transcript Type= protein_coding chr11 86800521 86952788 86800521 86952788 + ENST00000532234.5@PRSS23 ENST00000532234.5 protein_coding 86800521,86823377,86939020,86950356,86951216 86800651,86823593,86939126,86950499,86952788 Gene ID= ENSG00000150687.11 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr11 86800240 86811233 86800240 86811233 + ENST00000280258.5@PRSS23 ENST00000280258.5 protein_coding 86800240,86807631 86800651,86811233 Gene ID= ENSG00000150687.11 TPM= 138.55 Transcript Type= protein_coding chr11 86945679 86955391 86945679 86955391 - ENST00000531380.1@FZD4 ENST00000531380.1 protein_coding 86954801,86945679 86955391,86952470 Gene ID= ENSG00000174804.3 TPM= 32.6 Transcript Type= protein_coding chr11 87038033 87323526 87038033 87323526 + transcript4655.chr11.nnic@TMEM135 transcript4655.chr11.nnic protein_coding 87038033,87067694,87071523,87091362,87096886,87157341,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201 87038186,87067821,87071615,87091395,87096956,87157406,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87323526 Gene ID= ENSG00000166575.16 TPM= 2.72 Transcript Type= NA chr11 87037844 87323758 87037844 87323758 + ENST00000340353.11@TMEM135 ENST00000340353.11 protein_coding 87037844,87067694,87071523,87091362,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201 87038186,87067821,87071615,87091395,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87323758 Gene ID= ENSG00000166575.16 TPM= 11.77 Transcript Type= protein_coding chr11 87038018 87323526 87038018 87323526 + transcript4659.chr11.nnic@TMEM135 transcript4659.chr11.nnic protein_coding 87038018,87067694,87071523,87157341,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201 87038186,87067821,87071615,87157406,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87323526 Gene ID= ENSG00000166575.16 TPM= 3.62 Transcript Type= NA chr11 87037860 87323527 87037860 87323527 + transcript4661.chr11.nnic@TMEM135 transcript4661.chr11.nnic protein_coding 87037860,87091362,87157341,87236638,87295782,87302296,87305936,87309505,87313425,87314471,87318137,87319310,87321201 87038186,87091395,87157406,87236684,87295823,87302442,87306005,87309672,87313488,87314547,87318235,87319377,87323527 Gene ID= ENSG00000166575.16 TPM= 3.62 Transcript Type= NA chr11 88113242 88175467 88113242 88175467 - ENST00000243662.10@RAB38 ENST00000243662.10 protein_coding 88175183,88149675,88113242 88175467,88149955,88114140 Gene ID= ENSG00000123892.11 TPM= 39.84 Transcript Type= protein_coding chr11 88293592 88337787 88293592 88337787 - ENST00000227266.9@CTSC ENST00000227266.9 protein_coding 88337501,88334937,88312388,88309163,88300530,88296133,88293592 88337787,88335082,88312554,88309318,88300645,88296264,88294508 Gene ID= ENSG00000109861.15 TPM= 95.08 Transcript Type= protein_coding chr11 88326117 88337733 88326117 88337733 - ENST00000529974.1@CTSC ENST00000529974.1 protein_coding 88337501,88334937,88328112,88326117 88337733,88335082,88328196,88326399 Gene ID= ENSG00000109861.15 TPM= 1.81 Transcript Type= protein_coding chr11 89326344 89491485 89326344 89491485 - ENST00000263317.8@NOX4 ENST00000263317.8 protein_coding 89491190,89490458,89451785,89449440,89444135,89440688,89432784,89421902,89402326,89400215,89400017,89373432,89354962,89342074,89340063,89337447,89335845,89326344 89491485,89490553,89451895,89449524,89444232,89440715,89432856,89421982,89402542,89400379,89400079,89373492,89355043,89342193,89340171,89337515,89335945,89326876 Gene ID= ENSG00000086991.12 TPM= 1.81 Transcript Type= protein_coding chr11 90134673 90164200 90134673 90164200 + transcript4676.chr11.nic@NAALAD2 transcript4676.chr11.nic protein_coding 90134673,90135559,90147330,90149006,90150482,90152298,90158145,90159239,90162949,90163310,90163535 90134840,90135670,90147516,90149107,90150607,90152484,90158238,90159337,90163034,90163429,90164200 Gene ID= ENSG00000077616.10 TPM= 4.53 Transcript Type= NA chr11 93146151 93197977 93146151 93197977 - transcript4684.chr11.nic@SLC36A4 transcript4684.chr11.nic protein_coding 93197778,93185691,93184430,93182835,93181691,93180797,93167944,93165918,93162706,93154108,93146151 93197977,93185814,93184520,93182894,93181786,93180881,93168171,93166016,93162875,93154277,93148844 Gene ID= ENSG00000180773.14 TPM= 1.81 Transcript Type= NA chr11 93144171 93197963 93144171 93197963 - ENST00000326402.8@SLC36A4 ENST00000326402.8 protein_coding 93197778,93185691,93184430,93182806,93181691,93180797,93167944,93165918,93162706,93154108,93144171 93197963,93185814,93184520,93182894,93181786,93180881,93168171,93166016,93162875,93154277,93148844 Gene ID= ENSG00000180773.14 TPM= 13.58 Transcript Type= protein_coding chr11 93478475 93543354 93478475 93543354 - transcript4691.chr11.nnic@SMCO4 transcript4691.chr11.nnic protein_coding 93543276,93499276,93479372,93478475 93543354,93499348,93479503,93479269 Gene ID= ENSG00000166002.6 TPM= 4.83 Transcript Type= NA chr11 93478472 93543508 93478472 93543508 - ENST00000298966.6@SMCO4 ENST00000298966.6 protein_coding 93543276,93499276,93478472 93543508,93499348,93479269 Gene ID= ENSG00000166002.6 TPM= 51.01 Transcript Type= protein_coding chr11 93478472 93499351 93478472 93499351 - ENST00000525141.1@SMCO4 ENST00000525141.1 protein_coding 93499276,93478472 93499351,93479284 Gene ID= ENSG00000166002.6 TPM= 3.02 Transcript Type= protein_coding chr11 93730195 93741495 93730195 93741495 - transcript4701.chr11.nic@TAF1D transcript4701.chr11.nic protein_coding 93741322,93739237,93738109,93737064,93736694,93736141,93734625,93733350,93733087,93732244,93731753,93731150,93730677,93730195 93741495,93739331,93738499,93737239,93736751,93736304,93734660,93733397,93733121,93732291,93731799,93731216,93730712,93730447 Gene ID= ENSG00000166012.16 TPM= 4.53 Transcript Type= NA chr11 93741646 93763083 93741646 93763083 + transcript4711.chr11.nnic@C11orf54 transcript4711.chr11.nnic protein_coding 93741646,93743018,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515 93741728,93743765,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93763083 Gene ID= ENSG00000182919.14 TPM= 3.32 Transcript Type= NA chr11 93741594 93763102 93741594 93763102 + ENST00000540113.5@C11orf54 ENST00000540113.5 protein_coding 93741594,93750346,93753682,93753936,93755210,93757316,93759742,93761515 93741728,93750444,93753755,93754037,93755386,93757465,93759858,93763102 Gene ID= ENSG00000182919.14 TPM= 1.51 Transcript Type= protein_coding chr11 93741669 93762316 93741669 93762316 + ENST00000354421.7@C11orf54 ENST00000354421.7 protein_coding 93741669,93747297,93750346,93753682,93753936,93755210,93757316,93759742,93761515 93741728,93747448,93750444,93753755,93754037,93755386,93757465,93759858,93762316 Gene ID= ENSG00000182919.14 TPM= 2.72 Transcript Type= protein_coding chr11 93741652 93764450 93741652 93764450 + transcript4718.chr11.nic@AP001273.2 transcript4718.chr11.nic protein_coding 93741652,93747297,93753682,93753936,93755210,93757316,93759742,93761515 93741728,93747448,93753755,93754037,93755386,93757465,93759858,93764450 Gene ID= ENSG00000284057.1 TPM= 2.42 Transcript Type= NA chr11 93784227 93814963 93784227 93814963 + ENST00000251871.8@MED17 ENST00000251871.8 protein_coding 93784227,93788001,93790574,93793728,93793951,93794908,93796410,93797535,93801835,93807518,93809717,93811853 93784763,93788167,93790793,93793864,93794035,93795060,93796540,93797719,93801972,93807635,93809876,93814963 Gene ID= ENSG00000042429.11 TPM= 32.6 Transcript Type= protein_coding chr11 94128928 94181972 94128928 94181972 + ENST00000227638.7@PANX1 ENST00000227638.7 protein_coding 94128928,94153491,94178369,94179602,94180790 94129493,94153630,94178592,94180257,94181972 Gene ID= ENSG00000110218.8 TPM= 13.58 Transcript Type= protein_coding chr11 94419649 94493851 94419649 94493851 - transcript4728.chr11.nnic@MRE11 transcript4728.chr11.nnic protein_coding 94493647,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94445810,94437177,94435832,94429911,94419649 94493851,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94445893,94437235,94435899,94429986,94420181 Gene ID= ENSG00000020922.12 TPM= 1.81 Transcript Type= NA chr11 94418199 94493907 94418199 94493907 - transcript4729.chr11.nic@MRE11 transcript4729.chr11.nic protein_coding 94493684,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94445810,94437177,94435832,94429911,94418199 94493907,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94445893,94437235,94435899,94429986,94420181 Gene ID= ENSG00000020922.12 TPM= 16.3 Transcript Type= NA chr11 94419876 94493874 94419876 94493874 - ENST00000323977.7@MRE11 ENST00000323977.7 protein_coding 94493684,94492782,94490833,94485924,94479674,94478735,94476289,94471574,94470471,94467813,94464113,94460936,94459408,94456276,94447219,94437177,94435832,94429911,94419876 94493874,94492906,94490965,94486084,94479761,94478876,94476403,94471759,94470642,94467893,94464239,94461036,94459581,94456338,94447438,94437235,94435899,94429986,94420181 Gene ID= ENSG00000020922.12 TPM= 1.81 Transcript Type= protein_coding chr11 94493629 94499583 94493629 94499583 + ENST00000544612.5@ANKRD49 ENST00000544612.5 protein_coding 94493629,94496604,94498071 94494035,94496951,94499583 Gene ID= ENSG00000168876.8 TPM= 3.62 Transcript Type= protein_coding chr11 94768342 94876748 94768342 94876748 + ENST00000317829.12@AMOTL1 ENST00000317829.12 protein_coding 94768342,94799390,94821530,94830050,94831452,94850114,94853933,94859525,94864735,94865942,94869198,94870689 94768560,94800311,94821821,94830194,94831541,94850259,94854082,94859715,94864860,94866168,94869473,94876748 Gene ID= ENSG00000166025.17 TPM= 1.81 Transcript Type= protein_coding chr11 94962622 94973612 94962622 94973612 - ENST00000279839.7@CWC15 ENST00000279839.7 protein_coding 94973498,94972055,94971375,94970977,94969989,94966295,94962622 94973612,94972193,94971487,94971065,94970096,94966413,94963514 Gene ID= ENSG00000150316.11 TPM= 26.26 Transcript Type= protein_coding chr11 94973681 94999518 94973681 94999518 + ENST00000335080.5@KDM4D ENST00000335080.5 protein_coding 94973681,94975654,94997024 94974068,94975748,94999518 Gene ID= ENSG00000186280.6 TPM= 2.72 Transcript Type= protein_coding chr11 95089810 95132645 95089810 95132645 + ENST00000278505.4@ENDOD1 ENST00000278505.4 protein_coding 95089810,95128377 95090227,95132645 Gene ID= ENSG00000149218.4 TPM= 17.21 Transcript Type= protein_coding chr11 95770325 95789828 95770325 95789828 - transcript4752.chr11.nic@FAM76B transcript4752.chr11.nic protein_coding 95788499,95787624,95786119,95783065,95779879,95779607,95779078,95778822,95775922,95770325 95789828,95787678,95786274,95783264,95779926,95779687,95779135,95778957,95776023,95771650 Gene ID= ENSG00000077458.12 TPM= 4.53 Transcript Type= NA chr11 95768942 95789791 95768942 95789791 - ENST00000358780.9@FAM76B ENST00000358780.9 protein_coding 95789392,95788499,95787624,95786119,95783065,95779879,95779607,95778822,95775922,95768942 95789791,95788563,95787678,95786274,95783264,95779926,95779687,95778957,95776023,95771650 Gene ID= ENSG00000077458.12 TPM= 1.81 Transcript Type= protein_coding chr11 95790461 95832693 95790461 95832693 + ENST00000325542.9@CEP57 ENST00000325542.9 protein_coding 95790461,95799232,95812932,95813468,95817787,95818827,95821871,95822499,95827786,95829187,95831026 95790743,95799388,95813111,95813589,95817903,95818904,95821978,95822576,95828027,95829331,95832693 Gene ID= ENSG00000166037.10 TPM= 39.84 Transcript Type= protein_coding chr11 95834090 95924110 95834090 95924110 - transcript4762.chr11.nnic@MTMR2 transcript4762.chr11.nnic protein_coding 95923875,95914242,95888156,95887612,95882374,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834090 95924110,95914312,95888261,95887684,95882496,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 2.72 Transcript Type= NA chr11 95834089 95924110 95834089 95924110 - transcript4765.chr11.nnic@MTMR2 transcript4765.chr11.nnic protein_coding 95923875,95914242,95888156,95882374,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089 95924110,95914312,95888261,95882496,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 7.24 Transcript Type= NA chr11 95834089 95924105 95834089 95924105 - transcript4769.chr11.nnic@MTMR2 transcript4769.chr11.nnic protein_coding 95923875,95888156,95882374,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089 95924105,95888261,95882496,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 4.53 Transcript Type= NA chr11 95832882 95924109 95832882 95924109 - transcript4770.chr11.nic@MTMR2 transcript4770.chr11.nic protein_coding 95923875,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95832882 95924109,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 6.34 Transcript Type= NA chr11 95834102 95923845 95834102 95923845 - transcript4771.chr11.nic@MTMR2 transcript4771.chr11.nic protein_coding 95923692,95914242,95888156,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834102 95923845,95914312,95888261,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 1.81 Transcript Type= NA chr11 95834089 95924100 95834089 95924100 - ENST00000352297.11@MTMR2 ENST00000352297.11 protein_coding 95923875,95914242,95888156,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834089 95924100,95914312,95888261,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 9.96 Transcript Type= protein_coding chr11 95834088 95924096 95834088 95924096 - ENST00000409459.5@MTMR2 ENST00000409459.5 protein_coding 95923875,95914242,95888156,95887612,95865601,95862272,95861992,95858531,95857552,95850600,95849674,95847714,95844953,95841617,95838094,95836148,95834088 95924096,95914312,95888261,95887684,95865676,95862366,95862102,95858632,95857635,95850749,95849862,95847899,95845159,95841709,95838207,95836324,95835451 Gene ID= ENSG00000087053.18 TPM= 1.81 Transcript Type= protein_coding chr11 95976598 96343180 95976598 96343180 - ENST00000524717.5@MAML2 ENST00000524717.5 protein_coding 96341383,96091892,95991520,95985531,95976598 96343180,96093517,95991723,95985642,95979963 Gene ID= ENSG00000184384.13 TPM= 2.72 Transcript Type= protein_coding chr11 96352767 96389827 96352767 96389827 - transcript4778.chr11.nnic@CCDC82 transcript4778.chr11.nnic protein_coding 96389365,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96352767 96389827,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714 Gene ID= ENSG00000149231.11 TPM= 3.62 Transcript Type= NA chr11 96352767 96389922 96352767 96389922 - transcript4779.chr11.nic@CCDC82 transcript4779.chr11.nic protein_coding 96389844,96387530,96386254,96383962,96383269,96373375,96371013,96364980,96358993,96352767 96389922,96387613,96386293,96384761,96383473,96373467,96371137,96365150,96359178,96353714 Gene ID= ENSG00000149231.11 TPM= 19.02 Transcript Type= NA chr11 96389994 96393257 96389994 96393257 + ENST00000332349.4@JRKL ENST00000332349.4 protein_coding 96389994,96390483 96390073,96393257 Gene ID= ENSG00000183340.6 TPM= 5.43 Transcript Type= protein_coding chr11 101060461 101128234 101060461 101128234 - transcript4787.chr11.nic@PGR transcript4787.chr11.nic protein_coding 101127434,101126007,101091760,101060461 101128234,101126158,101091876,101062752 Gene ID= ENSG00000082175.14 TPM= 1.81 Transcript Type= NA chr11 102047411 102067397 102047411 102067397 + transcript4792.chr11.nnic@C11orf70 transcript4792.chr11.nnic protein_coding 102047411,102047815,102058880,102066485,102067225 102047580,102047896,102058955,102066651,102067397 Gene ID= ENSG00000137691.12 TPM= 3.62 Transcript Type= NA chr11 102047411 102070305 102047411 102070305 + transcript4793.chr11.nic@C11orf70 transcript4793.chr11.nic protein_coding 102047411,102047815,102058880,102066485 102047580,102047896,102058955,102070305 Gene ID= ENSG00000137691.12 TPM= 3.62 Transcript Type= NA chr11 102110461 102233423 102110461 102233423 + ENST00000537274.5@YAP1 ENST00000537274.5 protein_coding 102110461,102114144,102162456,102186018,102205893,102223622,102227469,102229702 102111169,102114394,102162571,102186131,102206086,102223752,102227581,102233423 Gene ID= ENSG00000137693.13 TPM= 19.02 Transcript Type= protein_coding chr11 102110461 102233423 102110461 102233423 + ENST00000282441.9@YAP1 ENST00000282441.9 protein_coding 102110461,102114144,102162456,102186018,102205893,102209517,102223622,102227469,102229702 102111169,102114394,102162571,102186131,102206074,102209564,102223752,102227581,102233423 Gene ID= ENSG00000137693.13 TPM= 6.34 Transcript Type= protein_coding chr11 102347235 102378670 102347235 102378670 + ENST00000227758.6@BIRC2 ENST00000227758.6 protein_coding 102347235,102348598,102350844,102362896,102363668,102368306,102377496,102377857,102377990 102347376,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378670 Gene ID= ENSG00000110330.8 TPM= 76.97 Transcript Type= protein_coding chr11 102347247 102378669 102347247 102378669 + ENST00000532672.5@BIRC2 ENST00000532672.5 protein_coding 102347247,102348598,102349878,102350844,102362896,102363668,102368306,102377496,102377857,102377990 102347376,102348764,102350749,102350943,102362974,102363716,102368548,102377750,102377898,102378669 Gene ID= ENSG00000110330.8 TPM= 3.92 Transcript Type= protein_coding chr11 102396327 102451940 102396327 102451940 - transcript4815.chr11.nnic@TMEM123 transcript4815.chr11.nnic protein_coding 102451803,102448812,102401916,102401539,102396327 102451940,102448868,102402206,102401692,102398891 Gene ID= ENSG00000152558.14 TPM= 5.66 Transcript Type= NA chr11 102396336 102453044 102396336 102453044 - ENST00000398136.6@TMEM123 ENST00000398136.6 protein_coding 102452524,102448812,102401916,102401539,102396336 102453044,102448868,102402206,102401692,102398891 Gene ID= ENSG00000152558.14 TPM= 204.88 Transcript Type= protein_coding chr11 103062067 103092215 103062067 103092215 - transcript4823.chr11.nic@DCUN1D5 transcript4823.chr11.nic protein_coding 103091787,103089227,103083256,103066459,103066269,103064275,103062067 103092215,103089318,103083326,103066567,103066373,103064377,103062414 Gene ID= ENSG00000137692.11 TPM= 9.96 Transcript Type= NA chr11 103080392 103092160 103080392 103092160 - transcript4824.chr11.nnic@DCUN1D5 transcript4824.chr11.nnic protein_coding 103091787,103089227,103083256,103082748,103080392 103092160,103089318,103083326,103082839,103081004 Gene ID= ENSG00000137692.11 TPM= 1.81 Transcript Type= NA chr11 103062079 103092215 103062079 103092215 - ENST00000260247.9@DCUN1D5 ENST00000260247.9 protein_coding 103091787,103089227,103083256,103082748,103066459,103066269,103064275,103062079 103092215,103089318,103083326,103082839,103066567,103066373,103064377,103062414 Gene ID= ENSG00000137692.11 TPM= 21.73 Transcript Type= protein_coding chr11 103907189 104164379 103907189 104164379 - ENST00000302251.9@PDGFD ENST00000302251.9 protein_coding 104163804,104000051,103996065,103947662,103943452,103926912,103907189 104164379,104000237,103996245,103947724,103943650,103927126,103909819 Gene ID= ENSG00000170962.12 TPM= 326.45 Transcript Type= protein_coding chr11 103907186 104164107 103907186 104164107 - ENST00000393158.6@PDGFD ENST00000393158.6 protein_coding 104163804,104000051,103996065,103947662,103943452,103926912,103907186 104164107,104000255,103996245,103947724,103943650,103927126,103909819 Gene ID= ENSG00000170962.12 TPM= 124.51 Transcript Type= protein_coding chr11 104942866 104969436 104942866 104969436 - ENST00000444739.6@CASP4 ENST00000444739.6 protein_coding 104968519,104954747,104951896,104950925,104949543,104948533,104947083,104944748,104942866 104969436,104955001,104952005,104951098,104949777,104948676,104947192,104944851,104942973 Gene ID= ENSG00000196954.13 TPM= 36.22 Transcript Type= protein_coding chr11 105025508 105035250 105025508 105035250 - ENST00000436863.7@CASP1 ENST00000436863.7 protein_coding 105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105026226,105025508 105035250,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356,105025600 Gene ID= ENSG00000137752.23 TPM= 5.89 Transcript Type= protein_coding chr11 105025512 105035154 105025512 105035154 - transcript4841.chr11.nic@CASP1 transcript4841.chr11.nic protein_coding 105035107,105034208,105031165,105030330,105029665,105029124,105026842,105026226,105025512 105035154,105034474,105031280,105030503,105029899,105029267,105026951,105026356,105025600 Gene ID= ENSG00000137752.23 TPM= 2.26 Transcript Type= NA chr11 105025508 105035149 105025508 105035149 - ENST00000533400.5@CASP1 ENST00000533400.5 protein_coding 105035107,105034208,105033064,105031165,105030330,105029665,105029124,105026842,105025508 105035149,105034474,105033126,105031280,105030503,105029899,105029267,105026951,105026356 Gene ID= ENSG00000137752.23 TPM= 3.62 Transcript Type= protein_coding chr11 105041562 105045333 105041562 105045333 - transcript4845.chr11.nnic@CARD16 transcript4845.chr11.nnic protein_coding 105045291,105044392,105043483,105041562 105045333,105044572,105043545,105041719 Gene ID= ENSG00000204397.7 TPM= 2.72 Transcript Type= NA chr11 106007902 106022227 106007902 106022227 - ENST00000301919.8@MSANTD4 ENST00000301919.8 protein_coding 106020962,106010456,106007902 106022227,106011067,106010110 Gene ID= ENSG00000170903.10 TPM= 3.17 Transcript Type= protein_coding chr11 106007921 106022228 106007921 106022228 - transcript4849.chr11.nic@MSANTD4 transcript4849.chr11.nic protein_coding 106021836,106010456,106007921 106022228,106011067,106010110 Gene ID= ENSG00000170903.10 TPM= 2.26 Transcript Type= NA chr11 106051098 106077459 106051098 106077459 - ENST00000526793.5@KBTBD3 ENST00000526793.5 protein_coding 106077312,106058865,106051098 106077459,106059109,106054455 Gene ID= ENSG00000182359.14 TPM= 3.62 Transcript Type= protein_coding chr11 106077489 106098710 106077489 106098710 + ENST00000278618.8@AASDHPPT ENST00000278618.8 protein_coding 106077489,106079467,106090557,106091316,106094583,106096743 106077893,106079692,106090678,106091477,106094654,106098710 Gene ID= ENSG00000149313.10 TPM= 109.57 Transcript Type= protein_coding chr11 106674012 107018524 106674012 107018524 - ENST00000526355.6@GUCY1A2 ENST00000526355.6 protein_coding 107017753,106986070,106978619,106939460,106809993,106776439,106708512,106674012 107018524,106986131,106978740,106940178,106810478,106776582,106708666,106687756 Gene ID= ENSG00000152402.10 TPM= 2.72 Transcript Type= protein_coding chr11 107326345 107457844 107326345 107457844 - ENST00000282251.9@CWF19L2 ENST00000282251.9 protein_coding 107457712,107455666,107454450,107442939,107441503,107439090,107433634,107428799,107418194,107416209,107392779,107390074,107353524,107348937,107336558,107334881,107329918,107326345 107457844,107455776,107454572,107443049,107441622,107439183,107433749,107429451,107418287,107416298,107392895,107390211,107353736,107349053,107336713,107334961,107330019,107327053 Gene ID= ENSG00000152404.15 TPM= 22.64 Transcript Type= protein_coding chr11 107502726 107565746 107502726 107565746 - ENST00000428149.6@ALKBH8 ENST00000428149.6 protein_coding 107565601,107560765,107556766,107553847,107553108,107551808,107549753,107532300,107525441,107522299,107510887,107502726 107565746,107560899,107557003,107553978,107553203,107551912,107549823,107532406,107525592,107522555,107511036,107505215 Gene ID= ENSG00000137760.14 TPM= 3.62 Transcript Type= protein_coding chr11 107790991 107859188 107790991 107859188 - ENST00000525815.5@SLC35F2 ENST00000525815.5 protein_coding 107858658,107815790,107811667,107806717,107805359,107804718,107803001,107790991 107859188,107815965,107811794,107806876,107805515,107804770,107803155,107792800 Gene ID= ENSG00000110660.14 TPM= 1.81 Transcript Type= protein_coding chr11 108008733 108107776 108008733 108107776 + ENST00000393094.6@CUL5 ENST00000393094.6 protein_coding 108008733,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530,108097636,108098406,108104190 108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108095691,108097754,108098529,108107776 Gene ID= ENSG00000166266.13 TPM= 21.73 Transcript Type= protein_coding chr11 108008900 108107763 108008900 108107763 + transcript4870.chr11.nnic@CUL5 transcript4870.chr11.nnic protein_coding 108008900,108033802,108046270,108049890,108052660,108054647,108054875,108070096,108072332,108073390,108078176,108088527,108089492,108094391,108094812,108095530,108097636,108098406,108106207 108009372,108033911,108046369,108050066,108052801,108054792,108054955,108070189,108072462,108073497,108078240,108088659,108089623,108094514,108094987,108095691,108097754,108098529,108107763 Gene ID= ENSG00000166266.13 TPM= 3.62 Transcript Type= NA chr11 108121516 108147776 108121516 108147776 + ENST00000265838.8@ACAT1 ENST00000265838.8 protein_coding 108121516,108131907,108133820,108134221,108135142,108138898,108140065,108141605,108142437,108143983,108146202,108147270 108121678,108131954,108133937,108134316,108135242,108139041,108140215,108141700,108142550,108144047,108146359,108147776 Gene ID= ENSG00000075239.13 TPM= 465.6 Transcript Type= protein_coding chr11 108157215 108222642 108157215 108222642 - ENST00000278612.8@NPAT ENST00000278612.8 protein_coding 108222500,108197302,108193957,108192118,108190460,108189106,108188098,108186482,108185403,108185232,108176994,108176246,108172199,108169928,108169744,108162120,108160880,108157215 108222642,108197420,108194017,108192190,108190500,108189330,108188179,108186569,108185494,108185319,108177090,108176374,108173851,108170043,108169852,108162180,108162014,108159019 Gene ID= ENSG00000149308.16 TPM= 1.81 Transcript Type= protein_coding chr11 108222832 108369099 108222832 108369099 + ENST00000278616.8@ATM ENST00000278616.8 protein_coding 108222832,108227595,108227776,108229178,108235670,108243953,108244788,108246964,108248933,108250701,108251837,108252817,108253814,108256215,108257481,108258986,108267171,108268410,108271064,108271251,108272532,108272722,108279491,108280995,108282710,108284227,108287600,108288977,108289602,108292619,108293313,108294927,108297287,108299714,108301648,108302853,108304675,108307897,108310160,108312411,108315823,108316011,108317373,108319954,108321301,108325310,108326058,108327645,108329021,108330214,108331444,108331879,108332762,108333886,108334969,108335845,108343222,108345743,108347279,108353766,108354811,108365082,108365325 108223186,108227696,108227888,108229323,108235834,108244118,108245026,108247127,108249102,108251072,108252031,108252912,108254039,108256340,108257606,108259075,108267342,108268609,108271146,108271406,108272607,108272852,108279608,108281168,108282879,108284473,108287715,108289103,108289801,108292793,108293477,108295059,108297382,108299885,108301789,108303029,108304852,108307984,108310315,108312498,108315911,108316113,108317521,108320058,108321420,108325544,108326225,108327758,108329238,108330421,108331557,108332037,108332900,108333968,108335109,108335961,108343371,108345908,108347365,108353880,108354874,108365218,108369099 Gene ID= ENSG00000149311.18 TPM= 2.72 Transcript Type= protein_coding chr11 108472109 108498589 108472109 108498589 - transcript4887.chr11.nnic@KDELC2 transcript4887.chr11.nnic protein_coding 108498165,108490970,108486157,108479301,108477607,108472109 108498589,108491167,108486440,108479495,108477711,108474952 Gene ID= ENSG00000178202.12 TPM= 3.17 Transcript Type= NA chr11 108472105 108498432 108472105 108498432 - ENST00000323468.9@KDELC2 ENST00000323468.9 protein_coding 108498165,108490970,108486157,108482006,108481180,108479301,108477607,108472105 108498432,108491167,108486440,108482222,108481376,108479495,108477711,108474952 Gene ID= ENSG00000178202.12 TPM= 30.34 Transcript Type= protein_coding chr11 108665025 108940930 108665025 108940930 + ENST00000322536.7@DDX10 ENST00000322536.7 protein_coding 108665025,108673467,108675596,108677085,108678315,108679371,108688936,108691876,108693516,108706739,108715879,108719797,108722997,108838446,108841315,108852153,108917873,108940246 108665339,108673527,108675726,108677243,108678435,108679560,108689062,108692038,108693600,108706837,108715966,108719885,108723462,108838565,108841476,108852209,108918018,108940930 Gene ID= ENSG00000178105.9 TPM= 22.64 Transcript Type= protein_coding chr11 110229450 110296722 110229450 110296722 - ENST00000343115.8@RDX ENST00000343115.8 protein_coding 110296467,110279681,110272536,110264779,110263960,110258106,110257767,110255289,110253946,110247703,110237492,110236099,110233237,110229450 110296722,110279756,110272619,110264874,110264234,110258189,110257913,110255385,110254109,110247833,110237652,110236191,110233479,110232033 Gene ID= ENSG00000137710.14 TPM= 480.48 Transcript Type= protein_coding chr11 110371786 110377600 110371786 110377600 + transcript4962.chr11.nnic@AP000924.1 transcript4962.chr11.nnic lincRNA 110371786,110375140,110377503 110372169,110375265,110377600 Gene ID= ENSG00000254416.5 TPM= 1.81 Transcript Type= NA chr11 110429883 110464881 110429883 110464881 + ENST00000260270.2@FDX1 ENST00000260270.2 protein_coding 110429883,110435834,110456918,110462354 110430305,110435958,110457047,110464881 Gene ID= ENSG00000137714.2 TPM= 3599.54 Transcript Type= protein_coding chr11 111602391 111730853 111602391 111730853 + ENST00000304987.3@SIK2 ENST00000304987.3 protein_coding 111602391,111616243,111620339,111688001,111700886,111701452,111703203,111704987,111712211,111719775,111720478,111720899,111721830,111722665,111723496 111602698,111616359,111620402,111688162,111701010,111701575,111703423,111705139,111712375,111720003,111720762,111721062,111721940,111722756,111730853 Gene ID= ENSG00000170145.4 TPM= 2.72 Transcript Type= protein_coding chr11 111726908 111766382 111726908 111766382 - ENST00000311129.9@PPP2R1B ENST00000311129.9 protein_coding 111766248,111765294,111764805,111760819,111759804,111755295,111754980,111754499,111753443,111752159,111747954,111743376,111742523,111742053,111737448,111726908 111766382,111765384,111764905,111761051,111759951,111755450,111755094,111754569,111753577,111752332,111748014,111743530,111742665,111742144,111737569,111727057 Gene ID= ENSG00000137713.15 TPM= 2.72 Transcript Type= protein_coding chr11 111782196 111871321 111782196 111871321 - transcript4989.chr11.nic@ALG9 transcript4989.chr11.nic protein_coding 111870775,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786402,111782196 111871321,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520,111786094 Gene ID= ENSG00000086848.14 TPM= 1.81 Transcript Type= NA chr11 111786278 111871320 111786278 111871320 - transcript4993.chr11.nic@ALG9 transcript4993.chr11.nic protein_coding 111870941,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786278 111871320,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520 Gene ID= ENSG00000086848.14 TPM= 1.81 Transcript Type= NA chr11 111786284 111871301 111786284 111871301 - ENST00000398006.6@ALG9 ENST00000398006.6 protein_coding 111870775,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284 111871301,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520 Gene ID= ENSG00000086848.14 TPM= 5.43 Transcript Type= protein_coding chr11 111786284 111871581 111786284 111871581 - ENST00000616540.4@ALG9 ENST00000616540.4 protein_coding 111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786284 111871581,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838399,111837615,111836294,111809773,111786520 Gene ID= ENSG00000086848.14 TPM= 5.43 Transcript Type= protein_coding chr11 111786256 111871533 111786256 111871533 - ENST00000614444.4@ALG9 ENST00000614444.4 protein_coding 111871352,111870232,111868602,111865181,111860547,111857602,111853649,111853380,111844601,111840655,111838249,111837468,111836165,111809643,111786256 111871533,111870370,111868736,111865251,111860635,111857737,111853736,111853485,111844723,111840809,111838378,111837615,111836294,111809773,111786520 Gene ID= ENSG00000086848.14 TPM= 4.53 Transcript Type= protein_coding chr11 111874056 111879180 111874056 111879180 - ENST00000260257.8@FDXACB1 ENST00000260257.8 protein_coding 111878961,111878556,111876808,111876481,111874056 111879180,111878712,111877011,111876639,111876104 Gene ID= ENSG00000255561.6 TPM= 3.62 Transcript Type= protein_coding chr11 111908622 111913213 111908622 111913213 - ENST00000616970.4@CRYAB ENST00000616970.4 protein_coding 111913105,111911524,111910327,111908622 111913213,111911922,111910449,111908967 Gene ID= ENSG00000109846.7 TPM= 13.58 Transcript Type= protein_coding chr11 111908624 111913173 111908624 111913173 - transcript5007.chr11.nic@CRYAB transcript5007.chr11.nic protein_coding 111913139,111911524,111910327,111908624 111913173,111911922,111910449,111908967 Gene ID= ENSG00000109846.7 TPM= 10.87 Transcript Type= NA chr11 111912242 111914093 111912242 111914093 + ENST00000304298.3@HSPB2 ENST00000304298.3 protein_coding 111912242,111913441 111912923,111914093 Gene ID= ENSG00000170276.5 TPM= 2.72 Transcript Type= protein_coding chr11 111937139 111975994 111937139 111975994 + transcript5015.chr11.nic@DIXDC1 transcript5015.chr11.nic protein_coding 111937139,111964549,111968513,111974023,111974876 111937559,111964678,111968638,111974254,111975994 Gene ID= ENSG00000150764.13 TPM= 9.51 Transcript Type= NA chr11 111937203 112022584 111937203 112022584 + ENST00000440460.6@DIXDC1 ENST00000440460.6 protein_coding 111937203,111964549,111968513,111974023,111974876,111980737,111982339,111985232,111986871,111989005,111992415,111992951,111993496,111993669,111995019,111995403,111996080,112016691,112017777,112018956 111937559,111964678,111968638,111974254,111974983,111980849,111982487,111985321,111986924,111989055,111992519,111993004,111993588,111993740,111995108,111995564,111996146,112016796,112017885,112022584 Gene ID= ENSG00000150764.13 TPM= 13.13 Transcript Type= protein_coding chr11 112074316 112085150 112074316 112085150 + ENST00000393047.7@C11orf57 ENST00000393047.7 protein_coding 112074316,112075567,112078215,112080409,112081982,112082465 112074916,112075643,112078315,112080558,112082035,112085150 Gene ID= ENSG00000150776.17 TPM= 9.96 Transcript Type= protein_coding chr11 112086773 112095794 112086773 112095794 + ENST00000375549.7@SDHD ENST00000375549.7 protein_coding 112086773,112087857,112088867,112094805 112086959,112087973,112089011,112095794 Gene ID= ENSG00000204370.9 TPM= 233.63 Transcript Type= protein_coding chr11 112143298 112164100 112143298 112164100 - transcript5030.chr11.nnic@IL18 transcript5030.chr11.nnic protein_coding 112163906,112159227,112154975,112153592,112150072,112148603,112143298 112164100,112159371,112155061,112153603,112150206,112148736,112143817 Gene ID= ENSG00000150782.11 TPM= 1.81 Transcript Type= NA chr11 112143251 112164117 112143251 112164117 - ENST00000280357.11@IL18 ENST00000280357.11 protein_coding 112163906,112154975,112153592,112150072,112148603,112143251 112164117,112155061,112153603,112150206,112148736,112143817 Gene ID= ENSG00000150782.11 TPM= 7.24 Transcript Type= protein_coding chr11 112175479 112225877 112175479 112225877 + transcript5034.chr11.nic@BCO2 transcript5034.chr11.nic protein_coding 112175479,112179278,112193474,112193879,112194653,112199699,112200613,112202023,112213724,112214762,112216220,112217761,112223933 112175689,112179482,112193697,112193994,112194755,112199827,112200773,112202190,112213861,112214944,112216330,112217889,112225877 Gene ID= ENSG00000197580.11 TPM= 5.43 Transcript Type= NA chr11 112175467 112218929 112175467 112218929 + ENST00000357685.9@BCO2 ENST00000357685.9 protein_coding 112175467,112179278,112193474,112193879,112194653,112199699,112200613,112202023,112213724,112214762,112216220,112217761 112175689,112179482,112193697,112193994,112194755,112199827,112200773,112202190,112213861,112214944,112216330,112218929 Gene ID= ENSG00000197580.11 TPM= 22.64 Transcript Type= protein_coding chr11 112175479 112225877 112175479 112225877 + transcript5043.chr11.nic@BCO2 transcript5043.chr11.nic protein_coding 112175479,112179278,112193474,112199699,112200613,112202023,112213724,112214762,112216220,112217761,112223933 112175689,112179482,112193697,112199827,112200773,112202190,112213861,112214944,112216330,112217889,112225877 Gene ID= ENSG00000197580.11 TPM= 1.81 Transcript Type= NA chr11 112175522 112218141 112175522 112218141 + ENST00000361053.8@BCO2 ENST00000361053.8 protein_coding 112175522,112179278,112193474,112199699,112200613,112202023,112213724,112214762,112216220,112217761 112175689,112179482,112193697,112199827,112200773,112202190,112213861,112214944,112216330,112218141 Gene ID= ENSG00000197580.11 TPM= 2.72 Transcript Type= protein_coding chr11 112226642 112233806 112226642 112233806 + transcript5051.chr11.nnic@PTS transcript5051.chr11.nnic protein_coding 112226642,112228594,112230208,112230626,112233163,112233432 112227281,112228673,112230230,112230682,112233233,112233806 Gene ID= ENSG00000150787.7 TPM= 3.62 Transcript Type= NA chr11 112226365 112233973 112226365 112233973 + ENST00000280362.7@PTS ENST00000280362.7 protein_coding 112226365,112228594,112230208,112230626,112233163,112233432 112226526,112228673,112230230,112230682,112233233,112233973 Gene ID= ENSG00000150787.7 TPM= 57.95 Transcript Type= protein_coding chr11 112290232 112294117 112290232 112294117 + transcript5054.chr11.nnic@AP002884.3 transcript5054.chr11.nnic lincRNA 112290232,112291320,112293727 112290509,112291405,112294117 Gene ID= ENSG00000250303.3 TPM= 3.62 Transcript Type= NA chr11 112290268 112292170 112290268 112292170 + ENST00000529938.1@AP002884.3 ENST00000529938.1 lincRNA 112290268,112291247 112290509,112292170 Gene ID= ENSG00000250303.3 TPM= 2.72 Transcript Type= lincRNA chr11 112280486 112291776 112280486 112291776 + ENST00000532168.2@AP002884.3 ENST00000532168.2 lincRNA 112280486,112291320 112280725,112291776 Gene ID= ENSG00000250303.3 TPM= 1.81 Transcript Type= lincRNA chr11 113314529 113366392 113314529 113366392 + ENST00000529221.5@TTC12 ENST00000529221.5 protein_coding 113314529,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113366225 113314618,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113366392 Gene ID= ENSG00000149292.16 TPM= 6.34 Transcript Type= protein_coding chr11 113314588 113369122 113314588 113369122 + transcript5067.chr11.nic@TTC12 transcript5067.chr11.nic protein_coding 113314588,113316243,113323288,113323994,113324605,113325524,113329920,113334966,113338774,113339286,113340664,113341837,113344272,113350073,113351239,113352070,113359363,113359940,113362401,113363828,113364835,113368187 113314618,113316315,113323451,113324015,113324682,113325645,113329979,113335037,113338834,113339474,113340733,113341925,113344440,113350165,113351299,113352207,113359461,113360008,113362502,113363927,113365060,113369122 Gene ID= ENSG00000149292.16 TPM= 1.81 Transcript Type= NA chr11 113733187 113773811 113733187 113773811 - ENST00000200135.7@ZW10 ENST00000200135.7 protein_coding 113773562,113768833,113760817,113760513,113760209,113758554,113757662,113748257,113747531,113743802,113741694,113739213,113738264,113737572,113736620,113733187 113773811,113768967,113760918,113760590,113760368,113758706,113757853,113748420,113747713,113744040,113741765,113739382,113738394,113737703,113736822,113733814 Gene ID= ENSG00000086827.8 TPM= 9.96 Transcript Type= protein_coding chr11 113797874 113875577 113797874 113875577 - transcript5076.chr11.nic@USP28 transcript5076.chr11.nic protein_coding 113875445,113854258,113852501,113841663,113840598,113834249,113833420,113831920,113830867,113829197,113827233,113823605,113817658,113815174,113813885,113812276,113809063,113808298,113804868,113804673,113803798,113803158,113801483,113797874 113875577,113854335,113852633,113841768,113840757,113834335,113833557,113831993,113830943,113829345,113827360,113823700,113817837,113815382,113813955,113812504,113809254,113808437,113805046,113804751,113803877,113803281,113801678,113799415 Gene ID= ENSG00000048028.11 TPM= 11.77 Transcript Type= NA chr11 114059593 114250676 114059593 114250676 + ENST00000335953.8@ZBTB16 ENST00000335953.8 protein_coding 114059593,114063211,114156337,114186952,114242167,114247198,114250326 114059882,114064568,114156434,114187038,114242337,114247365,114250676 Gene ID= ENSG00000109906.13 TPM= 36.22 Transcript Type= protein_coding chr11 114296365 114312515 114296365 114312515 + transcript5091.chr11.nic@NNMT transcript5091.chr11.nic protein_coding 114296365,114297951,114312045 114296710,114298194,114312515 Gene ID= ENSG00000166741.7 TPM= 3.62 Transcript Type= NA chr11 114400030 114410607 114400030 114410607 + ENST00000540163.5@RBM7 ENST00000540163.5 protein_coding 114400030,114401698,114402828,114405709,114407445 114400767,114401860,114402915,114405799,114410607 Gene ID= ENSG00000076053.10 TPM= 38.94 Transcript Type= protein_coding chr11 114439386 114450279 114439386 114450279 + ENST00000265881.9@REXO2 ENST00000265881.9 protein_coding 114439386,114440656,114443856,114444541,114445979,114447826,114449846 114439675,114440739,114443933,114444652,114446087,114447879,114450279 Gene ID= ENSG00000076043.9 TPM= 117.27 Transcript Type= protein_coding chr11 114439484 114450279 114439484 114450279 + ENST00000539275.5@REXO2 ENST00000539275.5 protein_coding 114439484,114440656,114449846 114439675,114440739,114450279 Gene ID= ENSG00000076043.9 TPM= 1.81 Transcript Type= protein_coding chr11 115169236 115504415 115169236 115504415 - ENST00000452722.7@CADM1 ENST00000452722.7 protein_coding 115504271,115240274,115238500,115231353,115229113,115217892,115214608,115209574,115178644,115169236 115504415,115240420,115238652,115231490,115229271,115217991,115214780,115209657,115178775,115176592 Gene ID= ENSG00000182985.17 TPM= 43.47 Transcript Type= protein_coding chr11 116748170 116772988 116748170 116772988 - ENST00000260210.4@BUD13 ENST00000260210.4 protein_coding 116772822,116770129,116765362,116762553,116760735,116759074,116758269,116757766,116757146,116748170 116772988,116770222,116765446,116763266,116760952,116759179,116758407,116757950,116757227,116748575 Gene ID= ENSG00000137656.11 TPM= 16.3 Transcript Type= protein_coding chr11 116773799 116788050 116773799 116788050 - ENST00000227322.7@ZPR1 ENST00000227322.7 protein_coding 116787820,116787482,116786969,116786511,116785796,116785514,116785099,116784855,116784378,116783530,116782919,116782158,116779772,116773799 116788050,116787643,116787059,116786581,116785882,116785636,116785146,116784921,116784448,116783619,116783029,116782244,116779837,116779059 Gene ID= ENSG00000109917.10 TPM= 61.58 Transcript Type= protein_coding chr11 116778190 116788035 116778190 116788035 - transcript5115.chr11.nic@ZPR1 transcript5115.chr11.nic protein_coding 116787820,116787482,116786969,116786511,116785796,116785514,116785099,116784859,116784378,116783530,116782919,116782158,116779772,116778190 116788035,116787643,116787059,116786581,116785882,116785636,116785146,116784921,116784498,116783619,116783029,116782244,116779837,116779059 Gene ID= ENSG00000109917.10 TPM= 1.81 Transcript Type= NA chr11 116866460 117098445 116866460 117098445 - transcript5119.chr11.nnic@SIK3 transcript5119.chr11.nnic protein_coding 117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875866,116875374,116875158,116873903,116873481,116870331,116867946,116866460 117098445,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116876009,116875451,116875267,116874056,116873636,116870401,116868089,116867404 Gene ID= ENSG00000160584.15 TPM= 2.26 Transcript Type= NA chr11 116869524 117098445 116869524 117098445 - transcript5121.chr11.nic@SIK3 transcript5121.chr11.nic protein_coding 117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875374,116875158,116873903,116873481,116869524 117098445,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116875451,116875267,116874056,116873636,116870401 Gene ID= ENSG00000160584.15 TPM= 2.26 Transcript Type= NA chr11 116843402 117098395 116843402 117098395 - ENST00000445177.5@SIK3 ENST00000445177.5 protein_coding 117098143,116956948,116954044,116927219,116897193,116896253,116876924,116876253,116875866,116875374,116875158,116873903,116873481,116870331,116867946,116863668,116862202,116861841,116861274,116859265,116857810,116849120,116847476,116846383,116843402 117098395,116957064,116954107,116927380,116897317,116896376,116877042,116876363,116876009,116875451,116875267,116874056,116873636,116870401,116868089,116863818,116862327,116861926,116861383,116859604,116858699,116849283,116847608,116846553,116845629 Gene ID= ENSG00000160584.15 TPM= 8.15 Transcript Type= protein_coding chr11 117144267 117171048 117144267 117171048 + ENST00000527958.5@PAFAH1B2 ENST00000527958.5 protein_coding 117144267,117152441,117159934,117161145,117163770,117167421 117144418,117152528,117160023,117161261,117163892,117171048 Gene ID= ENSG00000168092.13 TPM= 86.03 Transcript Type= protein_coding chr11 117144294 117171043 117144294 117171043 + transcript5142.chr11.nnic@PAFAH1B2 transcript5142.chr11.nnic protein_coding 117144294,117159934,117161145,117163770,117167421 117144418,117160023,117161261,117163892,117171043 Gene ID= ENSG00000168092.13 TPM= 69.73 Transcript Type= NA chr11 117199394 117204782 117199394 117204782 + ENST00000278968.10@TAGLN ENST00000278968.10 protein_coding 117199394,117203002,117203307,117203782,117204215 117199829,117203193,117203484,117203884,117204782 Gene ID= ENSG00000149591.16 TPM= 19.92 Transcript Type= protein_coding chr11 117205061 117232535 117205061 117232535 - transcript5130.chr11.nnic@PCSK7 transcript5130.chr11.nnic protein_coding 117232027,117230349,117229377,117228216,117227157,117225931,117224701,117223395,117223208,117219591,117219057,117218466,117208897,117207970,117207067,117206681,117205061 117232535,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117223308,117219758,117219164,117218568,117209053,117208064,117207160,117206798,117206356 Gene ID= ENSG00000160613.12 TPM= 4.53 Transcript Type= NA chr11 117205061 117232555 117205061 117232555 - transcript5134.chr11.nic@PCSK7 transcript5134.chr11.nic protein_coding 117232027,117230349,117229377,117228216,117227157,117225931,117224701,117223208,117219591,117219057,117218466,117208897,117207970,117207067,117206681,117205061 117232555,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117219758,117219164,117218568,117209053,117208064,117207160,117206798,117206356 Gene ID= ENSG00000160613.12 TPM= 3.62 Transcript Type= NA chr11 117204337 117232525 117204337 117232525 - ENST00000320934.7@PCSK7 ENST00000320934.7 protein_coding 117232027,117230349,117229377,117228216,117227157,117225931,117224701,117224078,117223208,117219591,117219057,117218466,117208897,117207970,117207067,117206681,117204337 117232525,117230468,117229856,117228350,117227322,117226021,117224755,117224216,117223308,117219758,117219164,117218568,117209053,117208064,117207160,117206798,117206356 Gene ID= ENSG00000160613.12 TPM= 63.39 Transcript Type= protein_coding chr11 117232625 117285686 117232625 117285686 + ENST00000300650.8@RNF214 ENST00000300650.8 protein_coding 117232625,117234267,117238601,117239801,117244445,117246809,117279908,117280171,117281314,117281600,117281894,117282404,117282746,117283115,117285086 117232726,117234379,117239111,117239860,117244585,117246948,117280004,117280259,117281404,117281698,117282270,117282536,117282850,117283210,117285686 Gene ID= ENSG00000167257.10 TPM= 9.96 Transcript Type= protein_coding chr11 117327850 117413264 117327850 117413264 + transcript5154.chr11.nic@CEP164 transcript5154.chr11.nic protein_coding 117327850,117335605,117338566,117344166,117351790,117361835,117362404,117363429,117371080,117373751,117375708,117380614,117381701,117382796,117387203,117390777,117390999,117392226,117392496,117393004,117394350,117394920,117395123,117395547,117396054,117396550,117397091,117407925,117408890,117409618,117410828,117411795,117412072 117328208,117335680,117338668,117344277,117351988,117361993,117362538,117363506,117371466,117373831,117375791,117380705,117381868,117382942,117387412,117390908,117391215,117392303,117392627,117393126,117394493,117395003,117395191,117395722,117396180,117396611,117397313,117408032,117409028,117409965,117410894,117411917,117413264 Gene ID= ENSG00000110274.15 TPM= 3.62 Transcript Type= NA chr11 117836978 117876658 117836978 117876658 - transcript5166.chr11.nnic@FXYD6 transcript5166.chr11.nnic protein_coding 117876592,117853309,117842719,117841990,117841791,117841148,117840319,117839781,117836978 117876658,117853403,117842781,117842028,117841865,117841184,117840368,117839830,117838277 Gene ID= ENSG00000137726.16 TPM= 28.07 Transcript Type= NA chr11 117986348 118001479 117986348 118001479 + ENST00000227752.7@IL10RA ENST00000227752.7 protein_coding 117986348,117988382,117989442,117993241,117993999,117995589,117998715 117986534,117988502,117989620,117993410,117994149,117995710,118001479 Gene ID= ENSG00000110324.10 TPM= 41.66 Transcript Type= protein_coding chr11 118133377 118152820 118133377 118152820 - ENST00000324727.8@SCN4B ENST00000324727.8 protein_coding 118152613,118145057,118143833,118141207,118133377 118152820,118145229,118144061,118141336,118137120 Gene ID= ENSG00000177098.8 TPM= 2.72 Transcript Type= protein_coding chr11 118253403 118264282 118253403 118264282 - ENST00000278937.6@MPZL2 ENST00000278937.6 protein_coding 118264096,118262931,118262438,118260054,118257238,118253403 118264282,118263097,118262648,118260201,118257313,118255233 Gene ID= ENSG00000149573.8 TPM= 6.34 Transcript Type= protein_coding chr11 118359585 118399211 118359585 118399211 + ENST00000252108.7@UBE4A ENST00000252108.7 protein_coding 118359585,118365040,118368631,118369423,118371514,118372507,118373086,118373494,118374896,118376574,118379446,118381391,118382589,118384635,118384832,118386438,118389725,118390657,118392738,118396314 118359674,118365201,118368804,118369535,118371666,118372666,118373288,118373685,118375229,118376694,118379750,118381523,118382776,118384735,118384945,118386612,118389905,118390804,118392895,118399211 Gene ID= ENSG00000110344.9 TPM= 19.92 Transcript Type= protein_coding chr11 118401154 118409851 118401154 118409851 + ENST00000300688.7@ATP5L ENST00000300688.7 protein_coding 118401154,118406937,118409000 118401717,118407097,118409851 Gene ID= ENSG00000167283.7 TPM= 429.68 Transcript Type= protein_coding chr11 118531202 118535836 118531202 118535836 + transcript5217.chr11.nic@TMEM25 transcript5217.chr11.nic protein_coding 118531202,118531775,118532246,118532917,118533420,118533857,118534029,118534266,118534507 118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535836 Gene ID= ENSG00000149582.15 TPM= 4.83 Transcript Type= NA chr11 118531202 118535833 118531202 118535833 + ENST00000533102.5@TMEM25 ENST00000533102.5 protein_coding 118531202,118531775,118532150,118532917,118533420,118533857,118534029,118534269,118535508 118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535833 Gene ID= ENSG00000149582.15 TPM= 13.58 Transcript Type= protein_coding chr11 118531209 118535835 118531209 118535835 + ENST00000313236.9@TMEM25 ENST00000313236.9 protein_coding 118531209,118531775,118532150,118532917,118533420,118533857,118534029,118534266,118534507 118531234,118531871,118532461,118533207,118533551,118533887,118534129,118534355,118535835 Gene ID= ENSG00000149582.15 TPM= 48.29 Transcript Type= protein_coding chr11 118544528 118566076 118544528 118566076 - ENST00000264021.7@IFT46 ENST00000264021.7 protein_coding 118565790,118564965,118559785,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544528 118566076,118565061,118559864,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011 Gene ID= ENSG00000118096.7 TPM= 22.19 Transcript Type= protein_coding chr11 118544543 118566035 118544543 118566035 - ENST00000264020.6@IFT46 ENST00000264020.6 protein_coding 118565790,118564965,118559785,118557738,118556906,118555248,118554990,118554459,118552214,118551786,118545793,118545409,118544543 118566035,118565061,118559864,118557890,118557045,118555322,118555083,118554587,118552335,118551852,118545853,118545494,118545011 Gene ID= ENSG00000118096.7 TPM= 6.79 Transcript Type= protein_coding chr11 118572453 118602928 118572453 118602928 + ENST00000264028.4@ARCN1 ENST00000264028.4 protein_coding 118572453,118581246,118583179,118583809,118584480,118590341,118592709,118593590,118597707,118600625 118572550,118581509,118583358,118584014,118584644,118590506,118592856,118593698,118597911,118602928 Gene ID= ENSG00000095139.13 TPM= 33.51 Transcript Type= protein_coding chr11 118610409 118658036 118610409 118658036 + transcript5233.chr11.nic@PHLDB1 transcript5233.chr11.nic protein_coding 118610409,118613816,118614559,118616041,118624934,118627305,118631207,118631913,118632159,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683 118610526,118613896,118614682,118616211,118625059,118628650,118631479,118632053,118632296,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658036 Gene ID= ENSG00000019144.18 TPM= 3.56 Transcript Type= NA chr11 118621375 118658036 118621375 118658036 + transcript5238.chr11.nic@PHLDB1 transcript5238.chr11.nic protein_coding 118621375,118624934,118627305,118631207,118631913,118632159,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683 118621538,118625059,118628650,118631479,118632053,118632296,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658036 Gene ID= ENSG00000019144.18 TPM= 7.18 Transcript Type= NA chr11 118634921 118658036 118634921 118658036 + transcript5240.chr11.nic@PHLDB1 transcript5240.chr11.nic protein_coding 118634921,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683 118635051,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658036 Gene ID= ENSG00000019144.18 TPM= 7.79 Transcript Type= NA chr11 118634963 118658036 118634963 118658036 + transcript5242.chr11.nic@PHLDB1 transcript5242.chr11.nic protein_coding 118634963,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683 118635163,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658036 Gene ID= ENSG00000019144.18 TPM= 25.9 Transcript Type= NA chr11 118607643 118658025 118607643 118658025 + ENST00000356063.9@PHLDB1 ENST00000356063.9 protein_coding 118607643,118613816,118614559,118616041,118624934,118627305,118631207,118631913,118632159,118635393,118638891,118639162,118643800,118644072,118645356,118645735,118647930,118650077,118650445,118655605,118656683 118607699,118613896,118614682,118616211,118625059,118628650,118631479,118632053,118632296,118635548,118639001,118639251,118643940,118644174,118645650,118645825,118648076,118650193,118650547,118655690,118658025 Gene ID= ENSG00000019144.18 TPM= 11.71 Transcript Type= protein_coding chr11 119015712 119018690 119015712 119018690 - ENST00000527673.1@RPS25 ENST00000527673.1 protein_coding 119018282,119017958,119017362,119015841,119015712 119018690,119018053,119017545,119015939,119015758 Gene ID= ENSG00000118181.10 TPM= 539.7 Transcript Type= protein_coding chr11 119015712 119018330 119015712 119018330 - ENST00000532567.5@RPS25 ENST00000532567.5 protein_coding 119018282,119017925,119017362,119015841,119015712 119018330,119018053,119017545,119015939,119015758 Gene ID= ENSG00000118181.10 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr11 119024351 119030906 119024351 119030906 - ENST00000330775.9@SLC37A4 ENST00000330775.9 protein_coding 119030849,119029222,119028194,119027726,119027628,119026937,119026603,119025967,119025191,119024351 119030906,119029564,119028426,119027872,119027724,119027095,119026688,119026080,119025329,119025076 Gene ID= ENSG00000137700.17 TPM= 42.56 Transcript Type= protein_coding chr11 119044185 119056944 119044185 119056944 - transcript5272.chr11.nic@HYOU1 transcript5272.chr11.nic protein_coding 119056805,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044185 119056944,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654 Gene ID= ENSG00000149428.18 TPM= 3.32 Transcript Type= NA chr11 119044185 119057225 119044185 119057225 - transcript5274.chr11.nic@HYOU1 transcript5274.chr11.nic protein_coding 119057153,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044185 119057225,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654 Gene ID= ENSG00000149428.18 TPM= 6.04 Transcript Type= NA chr11 119044189 119057137 119044189 119057137 - ENST00000617285.4@HYOU1 ENST00000617285.4 protein_coding 119057020,119056070,119055750,119055493,119055185,119054984,119054494,119054121,119052637,119052295,119052090,119051819,119051438,119051035,119049777,119049556,119049018,119048714,119048476,119048248,119047947,119047734,119046562,119046417,119045781,119044189 119057137,119056167,119055843,119055571,119055339,119055060,119054675,119054236,119052829,119052429,119052172,119051951,119051625,119051173,119049837,119049635,119049203,119048886,119048563,119048370,119048080,119047818,119046802,119046467,119045831,119045654 Gene ID= ENSG00000149428.18 TPM= 22.34 Transcript Type= protein_coding chr11 119067692 119081978 119067692 119081978 + ENST00000621676.4@VPS11 ENST00000621676.4 protein_coding 119067692,119069196,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459 119068010,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081978 Gene ID= ENSG00000160695.14 TPM= 135.83 Transcript Type= protein_coding chr11 119067821 119081967 119067821 119081967 + ENST00000614944.4@VPS11 ENST00000614944.4 protein_coding 119067821,119069173,119069442,119070234,119071596,119073198,119073800,119076897,119077501,119077878,119078173,119078565,119078795,119079129,119081092,119081459 119068202,119069344,119069577,119070397,119071843,119073399,119073951,119077083,119077647,119078066,119078334,119078704,119078997,119079300,119081314,119081967 Gene ID= ENSG00000160695.14 TPM= 9.96 Transcript Type= protein_coding chr11 119084883 119093547 119084883 119093547 + ENST00000278715.7@HMBS ENST00000278715.7 protein_coding 119084883,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092404,119092758,119092935,119093110 119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092163,119092523,119092811,119093021,119093547 Gene ID= ENSG00000256269.7 TPM= 23.09 Transcript Type= protein_coding chr11 119084881 119093549 119084881 119093549 + transcript5293.chr11.nic@HMBS transcript5293.chr11.nic protein_coding 119084881,119088255,119088635,119089082,119089217,119089683,119089990,119090190,119091413,119092125,119092758,119092935,119093110 119085066,119088308,119088707,119089131,119089272,119089760,119090067,119090265,119091526,119092523,119092811,119093021,119093549 Gene ID= ENSG00000256269.7 TPM= 3.17 Transcript Type= NA chr11 119093879 119095449 119093879 119095449 - ENST00000375167.1@H2AFX ENST00000375167.1 protein_coding 119094460,119093879 119095449,119094261 Gene ID= ENSG00000188486.3 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr11 119096507 119102142 119096507 119102142 - ENST00000354202.8@DPAGT1 ENST00000354202.8 protein_coding 119101495,119101018,119100630,119100262,119098403,119097855,119097464,119097142,119096507 119102142,119101138,119100843,119100408,119098487,119098043,119097551,119097297,119097063 Gene ID= ENSG00000172269.18 TPM= 76.22 Transcript Type= protein_coding chr11 119096504 119101895 119096504 119101895 - transcript5312.chr11.nic@DPAGT1 transcript5312.chr11.nic protein_coding 119101495,119101018,119100630,119100262,119098403,119097464,119097142,119096504 119101895,119101138,119100843,119100408,119098487,119097551,119097297,119097063 Gene ID= ENSG00000172269.18 TPM= 2.42 Transcript Type= NA chr11 119096510 119101878 119096510 119101878 - ENST00000392834.7@DPAGT1 ENST00000392834.7 protein_coding 119101495,119100630,119100262,119098403,119097855,119097464,119097142,119096510 119101878,119100843,119100408,119098487,119098043,119097551,119097297,119097063 Gene ID= ENSG00000172269.18 TPM= 1.97 Transcript Type= nonsense_mediated_decay chr11 119102250 119117124 119102250 119117124 + transcript5301.chr11.nnic@C2CD2L transcript5301.chr11.nnic protein_coding 119102250,119107071,119110104,119110561,119110847,119111052,119111263,119111521,119112328,119112482,119112700,119113611,119113855,119114080,119116045 119102375,119108095,119110199,119110680,119110957,119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119117124 Gene ID= ENSG00000172375.12 TPM= 2.72 Transcript Type= NA chr11 119107383 119118544 119107383 119118544 + ENST00000336702.7@C2CD2L ENST00000336702.7 protein_coding 119107383,119110104,119110561,119110847,119111052,119111263,119111521,119112328,119112482,119112700,119113611,119113852,119114080,119116045 119108095,119110199,119110680,119110957,119111168,119111374,119111629,119112392,119112609,119112874,119113712,119113988,119114365,119118544 Gene ID= ENSG00000172375.12 TPM= 19.02 Transcript Type= protein_coding chr11 119168699 119184016 119168699 119184016 + transcript5320.chr11.nic@NLRX1 transcript5320.chr11.nic protein_coding 119168699,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118 119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 44.92 Transcript Type= NA chr11 119168699 119184016 119168699 119184016 + transcript5321.chr11.nic@NLRX1 transcript5321.chr11.nic protein_coding 119168699,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821 119169042,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 18.11 Transcript Type= NA chr11 119168713 119184016 119168713 119184016 + transcript5323.chr11.nic@NLRX1 transcript5323.chr11.nic protein_coding 119168713,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821 119168894,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 4.53 Transcript Type= NA chr11 119168722 119184016 119168722 119184016 + transcript5325.chr11.nic@NLRX1 transcript5325.chr11.nic protein_coding 119168722,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821 119169302,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 8.15 Transcript Type= NA chr11 119168729 119184014 119168729 119184014 + ENST00000292199.6@NLRX1 ENST00000292199.6 protein_coding 119168729,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118 119168921,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184014 Gene ID= ENSG00000160703.15 TPM= 11.42 Transcript Type= protein_coding chr11 119168699 119184016 119168699 119184016 + transcript5327.chr11.nic@NLRX1 transcript5327.chr11.nic protein_coding 119168699,119171356,119172901,119173479,119174453,119179693,119181171,119182094,119183118 119169042,119171473,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 6.59 Transcript Type= NA chr11 119168699 119184016 119168699 119184016 + transcript5328.chr11.nic@NLRX1 transcript5328.chr11.nic protein_coding 119168699,119171356,119172901,119173479,119174453,119179693,119181171,119182094,119183821 119169042,119171473,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 5.43 Transcript Type= NA chr11 119168713 119184016 119168713 119184016 + transcript5329.chr11.nic@NLRX1 transcript5329.chr11.nic protein_coding 119168713,119171356,119172901,119173479,119174453,119179693,119181171,119182094,119183118 119168894,119171473,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 10.21 Transcript Type= NA chr11 119168728 119184012 119168728 119184012 + ENST00000409991.5@NLRX1 ENST00000409991.5 protein_coding 119168728,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118 119168894,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184012 Gene ID= ENSG00000160703.15 TPM= 11.73 Transcript Type= protein_coding chr11 119168764 119184016 119168764 119184016 + ENST00000409109.5@NLRX1 ENST00000409109.5 protein_coding 119168764,119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183118 119169302,119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 13.23 Transcript Type= protein_coding chr11 119171356 119184016 119171356 119184016 + ENST00000525863.1@NLRX1 ENST00000525863.1 protein_coding 119171356,119172356,119172901,119173479,119174453,119179693,119181171,119182094,119183821 119171473,119172425,119172989,119174098,119175274,119180288,119181257,119182345,119184016 Gene ID= ENSG00000160703.15 TPM= 2.72 Transcript Type= protein_coding chr11 119308527 119317161 119308527 119317161 - transcript5339.chr11.nnic@MCAM transcript5339.chr11.nnic protein_coding 119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119310349,119308527 119317161,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119310466,119309486 Gene ID= ENSG00000076706.16 TPM= 1.81 Transcript Type= NA chr11 119308527 119317161 119308527 119317161 - transcript5343.chr11.nic@MCAM transcript5343.chr11.nic protein_coding 119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119308527 119317161,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903 Gene ID= ENSG00000076706.16 TPM= 2.72 Transcript Type= NA chr11 119308529 119317116 119308529 119317116 - ENST00000264036.5@MCAM ENST00000264036.5 protein_coding 119317035,119315139,119314833,119314679,119314489,119312770,119312527,119312266,119312052,119311808,119311530,119311280,119311090,119310756,119310349,119308529 119317116,119315263,119315040,119314749,119314576,119312949,119312648,119312428,119312170,119311949,119311651,119311421,119311185,119310903,119310466,119309915 Gene ID= ENSG00000076706.16 TPM= 21.73 Transcript Type= protein_coding chr11 119338939 119340883 119338939 119340883 - ENST00000528368.2@C1QTNF5 ENST00000528368.2 protein_coding 119340695,119340184,119338939 119340883,119340440,119339848 Gene ID= ENSG00000223953.5 TPM= 30.79 Transcript Type= protein_coding chr11 119338942 119346673 119338942 119346673 - ENST00000619721.5@MFRP ENST00000619721.5 protein_coding 119346460,119346272,119346046,119345773,119345420,119344874,119344632,119344315,119343816,119342873,119342596,119341857,119340695,119340184,119338942 119346673,119346374,119346159,119345928,119345633,119345004,119344757,119344391,119343964,119343003,119342727,119341984,119341772,119340440,119339848 Gene ID= ENSG00000235718.8 TPM= 36.22 Transcript Type= protein_coding chr11 119355216 119381726 119355216 119381726 - ENST00000260187.6@USP2 ENST00000260187.6 protein_coding 119381473,119372707,119360184,119359537,119359231,119359024,119358773,119358149,119357981,119357757,119357483,119357187,119355216 119381726,119373521,119360234,119359660,119359342,119359134,119358837,119358252,119358061,119357835,119357590,119357307,119356922 Gene ID= ENSG00000036672.15 TPM= 4.53 Transcript Type= protein_coding chr11 119355215 119381711 119355215 119381711 - ENST00000455332.6@USP2 ENST00000455332.6 protein_coding 119381473,119360184,119359537,119359231,119359024,119358773,119358149,119357981,119357757,119357483,119357187,119355215 119381711,119360234,119359660,119359342,119359134,119358837,119358252,119358061,119357835,119357590,119357307,119356922 Gene ID= ENSG00000036672.15 TPM= 3.62 Transcript Type= protein_coding chr11 119364296 119500624 119364296 119500624 + transcript5351.chr11.nnic@USP2-AS1 transcript5351.chr11.nnic antisense_RNA 119364296,119394981,119469809,119498550 119364530,119395154,119469975,119500624 Gene ID= ENSG00000245248.7 TPM= 1.81 Transcript Type= NA chr11 119417378 119424128 119417378 119424128 - ENST00000284240.9@THY1 ENST00000284240.9 protein_coding 119423113,119420869,119420051,119417378 119424128,119420929,119420386,119419520 Gene ID= ENSG00000154096.13 TPM= 26.26 Transcript Type= protein_coding chr11 120210767 120230332 120210767 120230332 + ENST00000328965.8@OAF ENST00000328965.8 protein_coding 120210767,120225661,120226816,120228868 120211510,120225795,120226996,120230332 Gene ID= ENSG00000184232.8 TPM= 433.76 Transcript Type= protein_coding chr11 120325299 120333685 120325299 120333685 + transcript5370.chr11.nic@TMEM136 transcript5370.chr11.nic protein_coding 120325299,120327122,120327441,120329977,120330407 120325368,120327326,120327640,120330049,120333685 Gene ID= ENSG00000181264.8 TPM= 2.26 Transcript Type= NA chr11 120325155 120333685 120325155 120333685 + transcript5372.chr11.nic@TMEM136 transcript5372.chr11.nic protein_coding 120325155,120327441,120329977,120330407 120325368,120327640,120330049,120333685 Gene ID= ENSG00000181264.8 TPM= 5.89 Transcript Type= NA chr11 120325129 120333679 120325129 120333679 + ENST00000375095.2@TMEM136 ENST00000375095.2 protein_coding 120325129,120327441,120329977 120325368,120327640,120333679 Gene ID= ENSG00000181264.8 TPM= 14.49 Transcript Type= protein_coding chr11 120325296 120333679 120325296 120333679 + ENST00000531346.1@TMEM136 ENST00000531346.1 protein_coding 120325296,120329977 120325368,120333679 Gene ID= ENSG00000181264.8 TPM= 5.43 Transcript Type= processed_transcript chr11 120336494 120477862 120336494 120477862 + transcript5383.chr11.nic@ARHGEF12 transcript5383.chr11.nic protein_coding 120336494,120406118,120407738,120409394,120420753,120421803,120424358,120428069,120429440,120429712,120431771,120437308,120440129,120441707,120442104,120445422,120446403,120446948,120447874,120448234,120449109,120451512,120457118,120457721,120458080,120459174,120460672,120465237,120467194,120469288,120473050,120474560,120475340,120476661,120477219,120477447 120337275,120406141,120407823,120409450,120420851,120421852,120424415,120428247,120429517,120429831,120431911,120437382,120440221,120441817,120442202,120445464,120446508,120447085,120447906,120448348,120449214,120451724,120457250,120457756,120458234,120459320,120460757,120465362,120467308,120469388,120473127,120474635,120475507,120476748,120477305,120477862 Gene ID= ENSG00000196914.8 TPM= 1.81 Transcript Type= NA chr11 120336344 120477862 120336344 120477862 + transcript5385.chr11.nic@ARHGEF12 transcript5385.chr11.nic protein_coding 120336344,120406118,120407738,120420753,120421803,120424358,120428069,120429440,120429712,120431771,120437308,120440129,120441707,120442104,120445422,120446403,120446948,120447874,120448234,120449109,120451512,120457118,120457721,120458080,120459174,120460672,120465237,120467194,120469288,120473050,120474560,120475340,120476661,120477219,120477447 120337275,120406141,120407823,120420851,120421852,120424415,120428247,120429517,120429831,120431911,120437382,120440221,120441817,120442202,120445464,120446508,120447085,120447906,120448348,120449214,120451724,120457250,120457756,120458234,120459320,120460757,120465362,120467308,120469388,120473127,120474635,120475507,120476748,120477305,120477862 Gene ID= ENSG00000196914.8 TPM= 4.07 Transcript Type= NA chr11 120336204 120477862 120336204 120477862 + transcript5386.chr11.nnic@ARHGEF12 transcript5386.chr11.nnic protein_coding 120336204,120406118,120407738,120420753,120421803,120424358,120428069,120429440,120431771,120437308,120440129,120441707,120442104,120445422,120446403,120446948,120447874,120448234,120449109,120451512,120457118,120457721,120458080,120459174,120460672,120465237,120467194,120469288,120473050,120474560,120475340,120476661,120477219,120477447 120337275,120406141,120407823,120420851,120421852,120424415,120428247,120429517,120431911,120437382,120440221,120441817,120442202,120445464,120446508,120447085,120447906,120448348,120449214,120451724,120457250,120457756,120458234,120459320,120460757,120465362,120467308,120469388,120473127,120474635,120475507,120476748,120477305,120477862 Gene ID= ENSG00000196914.8 TPM= 2.26 Transcript Type= NA chr11 120511700 120988904 120511700 120988904 + ENST00000527524.7@GRIK4 ENST00000527524.7 protein_coding 120511700,120653685,120660269,120802693,120815378,120819755,120831852,120836791,120861959,120874066,120875139,120898532,120905290,120940347,120952855,120956780,120960909,120962456,120967195,120982106,120985904 120511887,120653792,120660400,120802857,120815475,120819920,120832030,120836844,120862120,120874218,120875243,120898639,120905493,120940460,120952964,120956953,120961074,120962681,120967323,120982224,120988904 Gene ID= ENSG00000149403.12 TPM= 1.81 Transcript Type= protein_coding chr11 121024121 121090775 121024121 121090775 + ENST00000422003.6@TBCEL ENST00000422003.6 protein_coding 121024121,121045674,121047528,121053551,121055052,121058345,121059969,121086778 121024291,121045823,121047667,121053732,121055308,121058471,121060085,121090775 Gene ID= ENSG00000154114.12 TPM= 9.96 Transcript Type= protein_coding chr11 121292453 121308694 121292453 121308694 + ENST00000264027.8@SC5D ENST00000264027.8 protein_coding 121292453,121303366,121304361,121306386,121307057 121292816,121303585,121304493,121306486,121308694 Gene ID= ENSG00000109929.9 TPM= 51.62 Transcript Type= protein_coding chr11 122089110 122101029 122089110 122101029 - ENST00000528986.1@MIR100HG ENST00000528986.1 processed_transcript 122100374,122089110 122101029,122091740 Gene ID= ENSG00000255248.7 TPM= 1.81 Transcript Type= lincRNA chr11 122655675 122814473 122655675 122814473 + ENST00000284273.5@UBASH3B ENST00000284273.5 protein_coding 122655675,122776219,122777024,122779497,122783053,122789100,122794702,122796156,122796911,122798942,122801188,122806410,122808067,122809749 122656210,122776272,122777210,122779695,122783222,122789308,122794834,122796276,122797033,122799034,122801332,122806516,122808176,122814473 Gene ID= ENSG00000154127.9 TPM= 1.81 Transcript Type= protein_coding chr11 123057489 123062335 123057489 123062335 - ENST00000534624.5@HSPA8 ENST00000534624.5 protein_coding 123062064,123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057489 123062335,123061329,123060798,123060268,123060028,123059261,123058830,123058484,123057919 Gene ID= ENSG00000109971.13 TPM= 1505.17 Transcript Type= protein_coding chr11 123057497 123061332 123057497 123061332 - ENST00000227378.7@HSPA8 ENST00000227378.7 protein_coding 123061120,123060593,123060116,123059473,123059059,123058632,123058252,123057497 123061332,123060798,123060268,123060028,123059261,123058830,123058484,123057919 Gene ID= ENSG00000109971.13 TPM= 19.17 Transcript Type= protein_coding chr11 123069865 123195281 123069865 123195281 - ENST00000448775.3@CLMP ENST00000448775.3 protein_coding 123194913,123097795,123084512,123083680,123083085,123074702,123069865 123195281,123097952,123084713,123083847,123083207,123074843,123073774 Gene ID= ENSG00000166250.11 TPM= 9.06 Transcript Type= protein_coding chr11 123430240 123623054 123430240 123623054 + transcript5427.chr11.nnic@GRAMD1B transcript5427.chr11.nnic protein_coding 123430240,123480816,123577367,123584312,123594082,123594735,123595942,123600468,123603426,123605322,123606609,123608659,123609795,123610196,123612761,123613455,123614745,123622506 123431166,123480893,123577577,123584332,123594166,123594838,123596037,123600548,123603541,123605478,123606798,123608802,123609913,123610338,123612864,123613658,123614835,123623054 Gene ID= ENSG00000023171.16 TPM= 2.72 Transcript Type= NA chr11 123428672 123435716 123428672 123435716 + transcript5429.chr11.nnic@GRAMD1B transcript5429.chr11.nnic protein_coding 123428672,123430841,123435434 123428862,123431166,123435716 Gene ID= ENSG00000023171.16 TPM= 5.43 Transcript Type= NA chr11 123430694 123622676 123430694 123622676 + ENST00000635736.1@GRAMD1B ENST00000635736.1 protein_coding 123430694,123480816,123577367,123584312,123594082,123594735,123595942,123600468,123603426,123605322,123606609,123608659,123609795,123610196,123612761,123613455,123614745,123618693,123619107,123622506 123431166,123480893,123577577,123584332,123594166,123594838,123596037,123600548,123603541,123605478,123606798,123608802,123609913,123610338,123612864,123613658,123614835,123618800,123619224,123622676 Gene ID= ENSG00000023171.16 TPM= 1.81 Transcript Type= protein_coding chr11 123724781 123741637 123724781 123741637 - transcript5435.chr11.nic@ZNF202 transcript5435.chr11.nic protein_coding 123741549,123740117,123730487,123729615,123729126,123728133,123727476,123724781 123741637,123740536,123730985,123729825,123729214,123728262,123727595,123726991 Gene ID= ENSG00000166261.10 TPM= 2.11 Transcript Type= NA chr11 123724177 123741670 123724177 123741670 - ENST00000336139.8@ZNF202 ENST00000336139.8 protein_coding 123741549,123740393,123730487,123729615,123729126,123728133,123727476,123724177 123741670,123740536,123730985,123729825,123729214,123728262,123727595,123726991 Gene ID= ENSG00000166261.10 TPM= 1.2 Transcript Type= protein_coding chr11 123724780 123741671 123724780 123741671 - ENST00000529691.1@ZNF202 ENST00000529691.1 protein_coding 123741549,123730487,123729615,123729126,123728133,123727476,123724780 123741671,123730985,123729825,123729214,123728262,123727595,123726991 Gene ID= ENSG00000166261.10 TPM= 1.2 Transcript Type= protein_coding chr11 124115362 124147721 124115362 124147721 + ENST00000456829.6@VWA5A ENST00000456829.6 protein_coding 124115362,124116566,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866 124115482,124116680,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124147721 Gene ID= ENSG00000110002.15 TPM= 10.26 Transcript Type= protein_coding chr11 124115404 124146909 124115404 124146909 + ENST00000392748.5@VWA5A ENST00000392748.5 protein_coding 124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237,124134920,124136129,124136574,124137015,124141598,124142442,124145237,124145866 124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124316,124135034,124136293,124136674,124137268,124141741,124142572,124145363,124146909 Gene ID= ENSG00000110002.15 TPM= 89.95 Transcript Type= protein_coding chr11 124115404 124124841 124115404 124124841 + ENST00000449321.5@VWA5A ENST00000449321.5 protein_coding 124115404,124116566,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237 124115482,124116680,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124841 Gene ID= ENSG00000110002.15 TPM= 8.15 Transcript Type= protein_coding chr11 124115404 124124841 124115404 124124841 + ENST00000361352.9@VWA5A ENST00000361352.9 protein_coding 124115404,124117497,124117673,124118189,124118533,124118975,124122960,124123366,124123660,124124237 124115482,124117554,124117875,124118411,124118708,124119089,124123129,124123454,124123804,124124841 Gene ID= ENSG00000110002.15 TPM= 42.56 Transcript Type= protein_coding chr11 124622836 124632434 124622836 124632434 + ENST00000473629.6@TBRG1 ENST00000473629.6 protein_coding 124622836,124624931,124625671,124626813,124630388,124630745,124631275,124632093 124623233,124625001,124625903,124627050,124630485,124630855,124631417,124632434 Gene ID= ENSG00000154144.12 TPM= 2.72 Transcript Type= retained_intron chr11 124622875 124635398 124622875 124635398 + ENST00000284290.8@TBRG1 ENST00000284290.8 protein_coding 124622875,124624931,124625671,124626904,124630388,124630745,124631275,124632093 124623233,124625001,124625903,124627050,124630485,124630855,124631417,124635398 Gene ID= ENSG00000154144.12 TPM= 14.49 Transcript Type= nonsense_mediated_decay chr11 124633113 124673881 124633113 124673881 - ENST00000263593.7@SIAE ENST00000263593.7 protein_coding 124673642,124669360,124660628,124654655,124649619,124648066,124647365,124639710,124638542,124633113 124673881,124669521,124660803,124654793,124649796,124648175,124647498,124639867,124638737,124637202 Gene ID= ENSG00000110013.12 TPM= 17.21 Transcript Type= protein_coding chr11 124635796 124652691 124635796 124652691 - transcript5456.chr11.nnic@SIAE transcript5456.chr11.nnic protein_coding 124651817,124649619,124648066,124647365,124639710,124638542,124635796 124652691,124649798,124648175,124647498,124639867,124638737,124637202 Gene ID= ENSG00000110013.12 TPM= 3.62 Transcript Type= NA chr11 124658874 124673821 124658874 124673821 - ENST00000436137.2@SIAE ENST00000436137.2 protein_coding 124673642,124669360,124658874 124673821,124669521,124660803 Gene ID= ENSG00000110013.12 TPM= 1.81 Transcript Type= retained_intron chr11 124753129 124762290 124753129 124762290 - transcript5468.chr11.nic@ESAM transcript5468.chr11.nic protein_coding 124762085,124754641,124754214,124753129 124762290,124754763,124754340,124753961 Gene ID= ENSG00000149564.11 TPM= 3.92 Transcript Type= NA chr11 124753123 124762284 124753123 124762284 - ENST00000278927.9@ESAM ENST00000278927.9 protein_coding 124762085,124758349,124756541,124756207,124754641,124754214,124753123 124762284,124758527,124756742,124756362,124754763,124754340,124753961 Gene ID= ENSG00000149564.11 TPM= 63.69 Transcript Type= protein_coding chr11 124753123 124762280 124753123 124762280 - ENST00000417453.5@ESAM ENST00000417453.5 protein_coding 124762085,124758349,124756541,124756207,124754630,124754214,124753123 124762280,124758527,124756742,124756362,124754763,124754340,124753961 Gene ID= ENSG00000149564.11 TPM= 6.64 Transcript Type= nonsense_mediated_decay chr11 124876121 124881470 124876121 124881470 + ENST00000527196.5@ROBO3 ENST00000527196.5 protein_coding 124876121,124877161,124877267,124877519,124877937,124878298,124878584,124879190,124879465,124879787,124880418,124881239 124876460,124877184,124877309,124877658,124878131,124878436,124878796,124879341,124879575,124879948,124880608,124881470 Gene ID= ENSG00000154134.14 TPM= 1.81 Transcript Type= retained_intron chr11 124883691 124898281 124883691 124898281 - ENST00000306534.7@ROBO4 ENST00000306534.7 protein_coding 124897726,124896932,124896513,124896198,124895785,124895457,124895081,124894201,124893860,124893688,124891666,124891299,124887733,124887358,124886977,124886464,124885041,124883691 124898281,124897261,124896670,124896318,124895912,124895685,124895193,124894369,124894045,124893730,124891802,124891562,124887840,124887499,124887213,124886822,124885247,124884913 Gene ID= ENSG00000154133.14 TPM= 19.02 Transcript Type= protein_coding chr11 125063067 125089237 125063067 125089237 + ENST00000403796.6@SLC37A2 ENST00000403796.6 protein_coding 125063067,125076757,125077230,125077450,125079112,125079684,125080614,125081421,125081754,125082244,125083815,125084234,125084825,125085066,125085395,125085577,125085954,125088119 125063426,125076838,125077323,125077528,125079247,125079760,125080780,125081458,125081906,125082334,125083877,125084319,125084873,125085139,125085473,125085674,125086018,125089237 Gene ID= ENSG00000134955.11 TPM= 206.69 Transcript Type= protein_coding chr11 125096545 125111708 125096545 125111708 - ENST00000531909.5@TMEM218 ENST00000531909.5 protein_coding 125111539,125102637,125102132,125101201,125096545 125111708,125102809,125102317,125101303,125097740 Gene ID= ENSG00000150433.9 TPM= 3.62 Transcript Type= protein_coding chr11 125097014 125111629 125097014 125111629 - transcript5519.chr11.nic@TMEM218 transcript5519.chr11.nic protein_coding 125111539,125102734,125102132,125101201,125097014 125111629,125102809,125102317,125101303,125097740 Gene ID= ENSG00000150433.9 TPM= 8.6 Transcript Type= NA chr11 125097014 125111869 125097014 125111869 - transcript5521.chr11.nic@TMEM218 transcript5521.chr11.nic protein_coding 125111585,125102734,125102132,125101201,125097014 125111869,125102809,125102317,125101303,125097740 Gene ID= ENSG00000150433.9 TPM= 5.89 Transcript Type= NA chr11 125164706 125433389 125164706 125433389 + ENST00000298282.13@PKNOX2 ENST00000298282.13 protein_coding 125164706,125235045,125331819,125351284,125367846,125385551,125397874,125410196,125410779,125411746,125429012,125429963,125431166 125164776,125235115,125331925,125351392,125367985,125385722,125398062,125410325,125410876,125411865,125429088,125430141,125433389 Gene ID= ENSG00000165495.15 TPM= 3.62 Transcript Type= protein_coding chr11 125445753 125496321 125445753 125496321 - transcript5527.chr11.nnic@FEZ1 transcript5527.chr11.nnic protein_coding 125496121,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125445753 125496321,125489822,125481633,125463570,125460666,125456106,125454210,125452409,125446111 Gene ID= ENSG00000149557.12 TPM= 1.81 Transcript Type= NA chr11 125445761 125496310 125445761 125496310 - ENST00000278919.7@FEZ1 ENST00000278919.7 protein_coding 125496121,125489467,125481534,125463484,125460498,125455835,125454130,125452334,125448502,125445761 125496310,125489822,125481633,125463570,125460666,125456106,125454210,125452409,125448567,125446111 Gene ID= ENSG00000149557.12 TPM= 14.49 Transcript Type= protein_coding chr11 125569477 125584681 125569477 125584681 + transcript5528.chr11.nic@EI24 transcript5528.chr11.nic protein_coding 125569477,125572458,125575263,125575803,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521 125569573,125572569,125575408,125575931,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584681 Gene ID= ENSG00000149547.14 TPM= 4.23 Transcript Type= NA chr11 125569389 125584681 125569389 125584681 + transcript5531.chr11.nic@EI24 transcript5531.chr11.nic protein_coding 125569389,125570104,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521 125569573,125570190,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584681 Gene ID= ENSG00000149547.14 TPM= 3.32 Transcript Type= NA chr11 125569216 125584687 125569216 125584687 + ENST00000278903.10@EI24 ENST00000278903.10 protein_coding 125569216,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125582346,125583521 125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125582420,125584687 Gene ID= ENSG00000149547.14 TPM= 63.99 Transcript Type= protein_coding chr11 125569382 125584229 125569382 125584229 + transcript5537.chr11.nnic@EI24 transcript5537.chr11.nnic protein_coding 125569382,125572458,125575263,125576255,125577504,125578133,125578949,125580093,125581211,125583521 125569573,125572569,125575408,125576315,125577570,125578257,125579068,125580204,125581322,125584229 Gene ID= ENSG00000149547.14 TPM= 1.81 Transcript Type= NA chr11 125592795 125623091 125592795 125623091 + ENST00000392708.8@STT3A ENST00000392708.8 protein_coding 125592795,125595881,125597059,125602303,125602803,125604157,125605629,125606301,125608109,125609434,125611428,125612592,125612989,125614087,125614324,125618373,125620011,125620772 125592918,125596003,125597119,125602424,125602948,125604247,125605735,125606465,125608289,125609589,125611519,125612747,125613177,125614203,125614426,125618561,125620126,125623091 Gene ID= ENSG00000134910.12 TPM= 66.1 Transcript Type= protein_coding chr11 125887060 125900648 125887060 125900648 + ENST00000425380.6@HYLS1 ENST00000425380.6 protein_coding 125887060,125891423,125899344 125887765,125891472,125900648 Gene ID= ENSG00000198331.10 TPM= 5.43 Transcript Type= protein_coding chr11 125893486 125903221 125893486 125903221 - ENST00000227474.7@PUS3 ENST00000227474.7 protein_coding 125903170,125895907,125895224,125893486 125903221,125896330,125895789,125894286 Gene ID= ENSG00000110060.8 TPM= 8.15 Transcript Type= protein_coding chr11 125893486 125903221 125893486 125903221 - transcript5549.chr11.nnic@PUS3 transcript5549.chr11.nnic protein_coding 125903170,125895907,125895670,125893486 125903221,125896330,125895789,125894286 Gene ID= ENSG00000110060.8 TPM= 2.72 Transcript Type= NA chr11 125893486 125903221 125893486 125903221 - ENST00000613398.4@PUS3 ENST00000613398.4 protein_coding 125903170,125895224,125893486 125903221,125895789,125894286 Gene ID= ENSG00000110060.8 TPM= 4.53 Transcript Type= protein_coding chr11 126202094 126211692 126202094 126211692 - ENST00000298317.8@RPUSD4 ENST00000298317.8 protein_coding 126211450,126210890,126209521,126205688,126205468,126204231,126202094 126211692,126211055,126209722,126205781,126205612,126204328,126203657 Gene ID= ENSG00000165526.8 TPM= 56.14 Transcript Type= protein_coding chr11 126211414 126262986 126211414 126262986 + ENST00000533050.5@FAM118B ENST00000533050.5 protein_coding 126211414,126229225,126234995,126240792,126250506,126254305,126256567,126261425,126262120 126211830,126229293,126235087,126241044,126250733,126254433,126256852,126261484,126262986 Gene ID= ENSG00000197798.8 TPM= 6.34 Transcript Type= protein_coding chr11 126262933 126268901 126262933 126268901 - transcript5563.chr11.nnic@SRPRA transcript5563.chr11.nnic protein_coding 126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264376,126264191,126263820,126262933 126268901,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264539,126264289,126264044,126263658 Gene ID= ENSG00000182934.11 TPM= 6.34 Transcript Type= NA chr11 126262919 126268959 126262919 126268959 - ENST00000332118.10@SRPRA ENST00000332118.10 protein_coding 126268688,126268003,126267549,126267175,126266763,126266476,126266187,126265963,126265737,126265268,126264959,126264376,126264191,126262919 126268959,126268086,126267712,126267335,126266922,126266629,126266278,126266081,126265823,126265440,126265172,126264539,126264289,126264044 Gene ID= ENSG00000182934.11 TPM= 174.77 Transcript Type= protein_coding chr11 126269133 126278124 126269133 126278124 + ENST00000263578.9@FOXRED1 ENST00000263578.9 protein_coding 126269133,126271437,126272969,126273336,126274927,126275327,126275794,126276059,126276394,126277071,126277435 126269291,126271657,126273079,126273454,126275021,126275428,126275870,126276219,126276523,126277175,126278124 Gene ID= ENSG00000110074.10 TPM= 45.28 Transcript Type= protein_coding chr11 126340889 126355579 126340889 126355579 - ENST00000629441.1@GSEC ENST00000629441.1 antisense_RNA 126355442,126340889 126355579,126342322 Gene ID= ENSG00000280832.1 TPM= 32.6 Transcript Type= antisense_RNA chr11 126355693 126414640 126355693 126414640 + transcript5600.chr11.nic@ST3GAL4 transcript5600.chr11.nic protein_coding 126355693,126406096,126406473,126406943,126407234,126407574,126408099,126408307,126409268,126413505,126413961 126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414640 Gene ID= ENSG00000110080.18 TPM= 8.33 Transcript Type= NA chr11 126355684 126414638 126355684 126414638 + ENST00000444328.6@ST3GAL4 ENST00000444328.6 protein_coding 126355684,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961 126355842,126406171,126406557,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414638 Gene ID= ENSG00000110080.18 TPM= 149.1 Transcript Type= protein_coding chr11 126355660 126414604 126355660 126414604 + ENST00000227495.10@ST3GAL4 ENST00000227495.10 protein_coding 126355660,126406096,126406473,126406943,126407252,126407574,126408099,126408307,126409268,126413505,126413961 126355842,126406171,126406545,126407023,126407349,126407634,126408194,126408496,126409411,126413648,126414604 Gene ID= ENSG00000110080.18 TPM= 6.52 Transcript Type= protein_coding chr11 128693770 128813267 128693770 128813267 + ENST00000527786.6@FLI1 ENST00000527786.6 protein_coding 128693770,128758115,128768118,128772782,128781958,128805366,128807180,128809157,128810459 128694276,128758326,128768272,128772985,128782023,128805431,128807239,128809204,128813267 Gene ID= ENSG00000151702.16 TPM= 5.43 Transcript Type= protein_coding chr11 128891315 128922732 128891315 128922732 + transcript5634.chr11.nnic@KCNJ5 transcript5634.chr11.nnic protein_coding 128891315,128911264,128916409,128919800 128891721,128912210,128917909,128922732 Gene ID= ENSG00000120457.11 TPM= 58.25 Transcript Type= NA chr11 128891315 128922732 128891315 128922732 + transcript5643.chr11.nnic@KCNJ5 transcript5643.chr11.nnic protein_coding 128891315,128911264,128921081 128891721,128912210,128922732 Gene ID= ENSG00000120457.11 TPM= 4.83 Transcript Type= NA chr11 128972461 128982891 128972461 128982891 - transcript5647.chr11.nnic@ARHGAP32 transcript5647.chr11.nnic protein_coding 128981829,128981416,128980553,128978762,128976563,128974124,128972461 128982891,128981563,128980748,128978915,128976629,128975002,128973435 Gene ID= ENSG00000134909.18 TPM= 2.72 Transcript Type= NA chr11 129863774 129895584 129863774 129895584 - transcript5651.chr11.nic@NFRKB transcript5651.chr11.nic protein_coding 129895496,129894359,129892715,129888594,129886317,129885435,129884745,129884070,129883122,129882451,129882086,129881727,129881443,129878464,129878309,129877325,129876721,129875357,129874793,129874501,129874113,129873745,129872884,129869494,129865877,129864966,129863774 129895584,129894438,129892870,129888795,129886444,129885609,129884846,129884143,129883206,129882631,129882194,129881853,129881508,129878543,129878355,129877385,129876895,129875463,129874916,129874580,129874333,129874015,129873096,129870261,129865983,129865101,129864850 Gene ID= ENSG00000170322.14 TPM= 15.39 Transcript Type= NA chr11 129899715 130002835 129899715 130002835 - ENST00000360871.7@PRDM10 ENST00000360871.7 protein_coding 130002722,129960896,129957746,129955512,129947145,129944771,129942426,129937598,129935101,129932102,129931016,129924882,129923248,129918539,129917127,129915660,129914704,129912085,129910476,129905638,129899715 130002835,129961082,129957910,129955571,129947370,129945012,129942629,129937670,129935218,129932231,129931258,129925229,129923403,129918718,129917237,129915860,129915018,129912225,129910656,129905741,129902516 Gene ID= ENSG00000170325.14 TPM= 2.72 Transcript Type= protein_coding chr11 130069822 130144810 130069822 130144810 + transcript5661.chr11.nic@APLP2 transcript5661.chr11.nic protein_coding 130069822,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347 130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144810 Gene ID= ENSG00000084234.16 TPM= 35.02 Transcript Type= NA chr11 130069894 130143806 130069894 130143806 + ENST00000528499.5@APLP2 ENST00000528499.5 protein_coding 130069894,130109429,130110538,130120706,130121614,130122305,130126700,130127766,130129048,130130038,130133629,130135563,130140398,130141498,130141919,130143347 130070082,130109602,130110661,130120818,130121810,130122513,130126830,130127840,130129206,130130166,130133728,130135715,130140483,130141572,130142074,130143806 Gene ID= ENSG00000084234.16 TPM= 46.79 Transcript Type= protein_coding chr11 130069906 130144811 130069906 130144811 + ENST00000263574.9@APLP2 ENST00000263574.9 protein_coding 130069906,130109429,130110538,130120706,130121614,130122305,130123612,130126700,130127766,130129048,130130038,130133629,130135563,130137256,130140398,130141498,130141919,130143347 130070082,130109602,130110661,130120818,130121810,130122513,130123779,130126830,130127840,130129206,130130166,130133728,130135715,130137291,130140483,130141572,130142074,130144811 Gene ID= ENSG00000084234.16 TPM= 40.45 Transcript Type= protein_coding chr11 130159562 130210376 130159562 130210376 + ENST00000278742.5@ST14 ENST00000278742.5 protein_coding 130159562,130188114,130188530,130188869,130189739,130190113,130190454,130194149,130194640,130196339,130196570,130197841,130198308,130198508,130198947,130199951,130208410,130209442,130209662 130160060,130188273,130188657,130188939,130189896,130190148,130190694,130194288,130194737,130196448,130196700,130197945,130198418,130198621,130199069,130200137,130208684,130209578,130210376 Gene ID= ENSG00000149418.10 TPM= 19.92 Transcript Type= protein_coding chr11 130315039 130315683 130315039 130315683 + ENST00000602310.1@AP002986.1 ENST00000602310.1 lincRNA 130315039,130315328,130315551 130315115,130315447,130315683 Gene ID= ENSG00000175773.12 TPM= 1.81 Transcript Type= lincRNA chr11 130875872 130916501 130875872 130916501 - transcript5680.chr11.nnic@SNX19 transcript5680.chr11.nnic protein_coding 130916280,130911633,130910270,130910018,130908361,130907953,130906625,130905953,130903255,130880622,130879624,130875872 130916501,130911771,130910370,130910137,130908445,130908083,130906721,130906133,130903384,130880806,130879711,130878554 Gene ID= ENSG00000120451.10 TPM= 3.49 Transcript Type= NA chr11 130875507 130916501 130875507 130916501 - transcript5682.chr11.nic@SNX19 transcript5682.chr11.nic protein_coding 130916280,130911451,130910270,130910018,130907953,130906625,130905953,130903255,130880622,130879624,130875507 130916501,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130880806,130879711,130878554 Gene ID= ENSG00000120451.10 TPM= 7.11 Transcript Type= NA chr11 130875436 130916509 130875436 130916509 - ENST00000265909.8@SNX19 ENST00000265909.8 protein_coding 130914266,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130880622,130879624,130875436 130916509,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130880806,130879711,130878554 Gene ID= ENSG00000120451.10 TPM= 27.48 Transcript Type= protein_coding chr11 130875880 130916477 130875880 130916477 - transcript5684.chr11.nnic@SNX19 transcript5684.chr11.nnic protein_coding 130915148,130911633,130910270,130910018,130907953,130906625,130905953,130903255,130880622,130879624,130875880 130916477,130911771,130910370,130910137,130908083,130906721,130906133,130903384,130880806,130879711,130878554 Gene ID= ENSG00000120451.10 TPM= 6.66 Transcript Type= NA chr11 134068925 134152001 134068925 134152001 + ENST00000299106.8@JAM3 ENST00000299106.8 protein_coding 134068925,134139851,134140657,134144241,134144792,134145946,134148547,134148764,134149146 134069159,134139916,134140770,134144393,134144994,134146045,134148676,134148818,134152001 Gene ID= ENSG00000166086.12 TPM= 121.34 Transcript Type= protein_coding chr11 134150660 134225460 134150660 134225460 - transcript5693.chr11.nic@NCAPD3 transcript5693.chr11.nic protein_coding 134225097,134223863,134220572,134216936,134210270,134209313,134209145,134208864,134206599,134204899,134204046,134203654,134203142,134202816,134194665,134194016,134192689,134185335,134184903,134184637,134181077,134178822,134178634,134177219,134176307,134168917,134168469,134167996,134161781,134159892,134158329,134157928,134157018,134153289,134153140,134150660 134225460,134224000,134220726,134217098,134210454,134209477,134209206,134208951,134206732,134204971,134204171,134203906,134203198,134202905,134194738,134194150,134192909,134185526,134185000,134184752,134181184,134178936,134178741,134177457,134176386,134169054,134168602,134168195,134161891,134160074,134158495,134158067,134157095,134153363,134153200,134153052 Gene ID= ENSG00000151503.12 TPM= 10.87 Transcript Type= NA chr11 134224645 134247792 134224645 134247792 + ENST00000281187.9@VPS26B ENST00000281187.9 protein_coding 134224645,134234897,134239991,134243119,134244938,134245444 134225345,134235053,134240155,134243294,134245080,134247792 Gene ID= ENSG00000151502.10 TPM= 150.32 Transcript Type= protein_coding chr11 134248269 134253365 134248269 134253365 - transcript5710.chr11.nnic@THYN1 transcript5710.chr11.nnic protein_coding 134253227,134252840,134251130,134250275,134249828,134249167,134248809,134248269 134253365,134252916,134251308,134250343,134249920,134249262,134248836,134248484 Gene ID= ENSG00000151500.14 TPM= 2.49 Transcript Type= NA chr11 134248284 134253414 134248284 134253414 - transcript5716.chr11.nic@THYN1 transcript5716.chr11.nic protein_coding 134253299,134252840,134251130,134250275,134249828,134249167,134248284 134253414,134252916,134251308,134250343,134249920,134249262,134248484 Gene ID= ENSG00000151500.14 TPM= 2.04 Transcript Type= NA chr11 134248279 134253370 134248279 134253370 - ENST00000392594.7@THYN1 ENST00000392594.7 protein_coding 134253299,134252840,134251130,134250275,134249828,134249167,134248809,134248279 134253370,134252916,134251308,134250343,134249920,134249262,134248959,134248484 Gene ID= ENSG00000151500.14 TPM= 22.41 Transcript Type= protein_coding chr11 134248279 134253344 134248279 134253344 - ENST00000341541.7@THYN1 ENST00000341541.7 protein_coding 134252840,134251130,134250275,134249828,134249167,134248809,134248279 134253344,134251308,134250343,134249920,134249262,134248959,134248484 Gene ID= ENSG00000151500.14 TPM= 13.58 Transcript Type= protein_coding chr11 134248288 134253350 134248288 134253350 - ENST00000352327.5@THYN1 ENST00000352327.5 protein_coding 134253227,134252840,134251130,134250275,134249828,134249167,134248288 134253350,134252916,134251308,134250343,134249920,134249262,134248484 Gene ID= ENSG00000151500.14 TPM= 1.13 Transcript Type= protein_coding chr11 134253514 134265850 134253514 134265850 + transcript5718.chr11.nnic@ACAD8 transcript5718.chr11.nnic protein_coding 134253514,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134263336,134264908 134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134263555,134265850 Gene ID= ENSG00000151498.11 TPM= 5.43 Transcript Type= NA chr11 134253514 134265850 134253514 134265850 + transcript5720.chr11.nic@ACAD8 transcript5720.chr11.nic protein_coding 134253514,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134262770 134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265850 Gene ID= ENSG00000151498.11 TPM= 8.15 Transcript Type= NA chr11 134253514 134265850 134253514 134265850 + transcript5725.chr11.nic@ACAD8 transcript5725.chr11.nic protein_coding 134253514,134256548,134257088,134258515,134259008,134259608,134261275,134261738,134262520,134264908 134253709,134256648,134257257,134258624,134259084,134261179,134261372,134261890,134262622,134265850 Gene ID= ENSG00000151498.11 TPM= 5.61 Transcript Type= NA chr11 134253514 134265850 134253514 134265850 + transcript5728.chr11.nic@ACAD8 transcript5728.chr11.nic protein_coding 134253514,134256548,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908 134253709,134256648,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265850 Gene ID= ENSG00000151498.11 TPM= 5.61 Transcript Type= NA chr11 134253495 134265855 134253495 134265855 + ENST00000281182.8@ACAD8 ENST00000281182.8 protein_coding 134253495,134256548,134257088,134258515,134259008,134259608,134261044,134261275,134261738,134262520,134264908 134253709,134256648,134257257,134258624,134259084,134259745,134261179,134261372,134261890,134262622,134265855 Gene ID= ENSG00000151498.11 TPM= 93.45 Transcript Type= protein_coding chr11 134253561 134265850 134253561 134265850 + ENST00000374752.6@ACAD8 ENST00000374752.6 protein_coding 134253561,134259008,134259608,134261044,134261275,134261738,134262520,134264908 134253709,134259084,134259745,134261179,134261372,134261890,134262622,134265850 Gene ID= ENSG00000151498.11 TPM= 1.99 Transcript Type= protein_coding chr11 134331886 134376323 134331886 134376323 + transcript5736.chr11.nnic@GLB1L2 transcript5736.chr11.nnic protein_coding 134331886,134342754,134344387,134345034,134347325,134356301,134359060,134364328,134367257,134368644,134369805,134370293,134371008,134371421,134371752,134373721,134374145,134374602,134374972,134375872 134332147,134342951,134344455,134345129,134347433,134356393,134359141,134364398,134367341,134368781,134369885,134370399,134371148,134371492,134371830,134373808,134374256,134374718,134375801,134376323 Gene ID= ENSG00000149328.14 TPM= 5.43 Transcript Type= NA chr11 134331886 134376324 134331886 134376324 + transcript5737.chr11.nnic@GLB1L2 transcript5737.chr11.nnic protein_coding 134331886,134342754,134344387,134345034,134347325,134356301,134359060,134364328,134367257,134368644,134369805,134370293,134371008,134371421,134371752,134373721,134374145,134374602,134374972,134376012 134332147,134342951,134344455,134345129,134347433,134356393,134359141,134364398,134367341,134368781,134369885,134370399,134371148,134371492,134371830,134373808,134374256,134374718,134375801,134376324 Gene ID= ENSG00000149328.14 TPM= 11.77 Transcript Type= NA chr12 280129 389454 280129 389454 - ENST00000399788.6@KDM5A ENST00000399788.6 protein_coding 388927,385897,384031,365934,362963,356432,355158,354076,352205,350621,334241,333487,331819,328835,323600,323082,322417,320995,318106,313056,310885,309803,307454,306946,297041,295573,292759,280129 389454,385974,384153,366104,363097,356537,355249,354234,352324,350779,334422,333649,331938,329029,323781,323206,322567,321109,318461,313194,311064,309964,308005,307089,297200,295793,293169,285662 Gene ID= ENSG00000073614.12 TPM= 9.96 Transcript Type= protein_coding chr12 389344 442639 389344 442639 + transcript14.chr12.nic@CCDC77 transcript14.chr12.nic protein_coding 389344,405511,409368,411747,418494,428769,430664,431866,433174,438335,440617,440844,441774 389486,405564,409421,411978,418636,428865,430736,431954,433322,438554,440742,440996,442639 Gene ID= ENSG00000120647.9 TPM= 2.26 Transcript Type= NA chr12 401576 442645 401576 442645 + ENST00000239830.8@CCDC77 ENST00000239830.8 protein_coding 401576,405511,409368,411747,418494,428769,430664,431866,433174,438335,440617,440844,441774 401684,405564,409421,411978,418636,428865,430736,431954,433322,438554,440742,440996,442645 Gene ID= ENSG00000120647.9 TPM= 1.36 Transcript Type= protein_coding chr12 401637 442642 401637 442642 + ENST00000412006.6@CCDC77 ENST00000412006.6 protein_coding 401637,405511,411747,418494,428769,430664,431866,433174,438335,440617,440844,441774 401684,405564,411978,418636,428865,430736,431954,433322,438554,440742,440996,442642 Gene ID= ENSG00000120647.9 TPM= 5.43 Transcript Type= protein_coding chr12 459976 555543 459976 555543 + transcript21.chr12.nic@B4GALNT3 transcript21.chr12.nic protein_coding 459976,535166,536218,544339,544882,545369,546646,548024,548231,549769,550922,552063,552467,553191 460545,535269,536295,544434,544972,545469,546713,548102,548297,549912,551031,552163,552528,555543 Gene ID= ENSG00000139044.10 TPM= 1.81 Transcript Type= NA chr12 642981 645415 642981 645415 + ENST00000318291.4@AC021054.1 ENST00000318291.4 antisense_RNA 642981,643959 643717,645415 Gene ID= ENSG00000177406.4 TPM= 3.62 Transcript Type= antisense_RNA chr12 752593 911300 752593 911300 + ENST00000535572.5@WNK1 ENST00000535572.5 protein_coding 752593,813642,827042,830003,857161,859245,861013,862083,871265,878215,881692,881911,882943,883395,883774,884121,884649,887221,889140,890453,894562,896071,897479,900476,907847,908475 754324,813814,827262,830160,857249,859464,861343,862270,871348,878361,881789,882073,883059,883568,883831,884243,886084,887304,889223,890510,894635,896732,897681,900670,908034,911300 Gene ID= ENSG00000060237.16 TPM= 1.81 Transcript Type= protein_coding chr12 885491 911451 885491 911451 + transcript29.chr12.nic@WNK1 transcript29.chr12.nic protein_coding 885491,887221,889140,890453,894562,896071,897479,900476,907847,908475 886084,887304,889223,890513,894635,896732,897681,900670,908034,911451 Gene ID= ENSG00000060237.16 TPM= 9.06 Transcript Type= NA chr12 879538 885693 879538 885693 + transcript32.chr12.nnic@WNK1 transcript32.chr12.nnic protein_coding 879538,881911,882943,883393,883774,884121,884647 881789,882073,883059,883568,883831,884243,885693 Gene ID= ENSG00000060237.16 TPM= 4.53 Transcript Type= NA chr12 912077 949722 912077 949722 - ENST00000358495.7@RAD52 ENST00000358495.7 protein_coding 949602,932975,931220,930051,929819,927145,925450,916639,916344,914431,913894,912077 949722,933076,931321,930144,929886,927263,925525,916820,916483,914532,914121,913452 Gene ID= ENSG00000002016.17 TPM= 3.62 Transcript Type= protein_coding chr12 1203388 1495924 1203388 1495924 + transcript36.chr12.nnic@ERC1 transcript36.chr12.nnic protein_coding 1203388,1204501,1236769,1263034,1289852,1371833,1408149,1444562,1490093 1203452,1204512,1236904,1263165,1290012,1371977,1408247,1444750,1495924 Gene ID= ENSG00000082805.19 TPM= 15.39 Transcript Type= NA chr12 1565993 1594165 1565993 1594165 - ENST00000339235.3@FBXL14 ENST00000339235.3 protein_coding 1592873,1565993 1594165,1566810 Gene ID= ENSG00000171823.6 TPM= 1.81 Transcript Type= protein_coding chr12 1629907 1647231 1629907 1647231 + transcript43.chr12.nic@WNT5B transcript43.chr12.nic protein_coding 1629907,1631298,1632658,1639684,1645794 1630226,1631434,1632905,1639976,1647231 Gene ID= ENSG00000111186.12 TPM= 2.72 Transcript Type= NA chr12 1691009 1788678 1691009 1788678 + transcript46.chr12.nnic@ADIPOR2 transcript46.chr12.nnic protein_coding 1691009,1754258,1772842,1777854,1780451,1780889,1783880,1785944 1691213,1754514,1772961,1778025,1780637,1781076,1784073,1788678 Gene ID= ENSG00000006831.9 TPM= 7.24 Transcript Type= NA chr12 1691027 1788678 1691027 1788678 + ENST00000357103.4@ADIPOR2 ENST00000357103.4 protein_coding 1691027,1754258,1772842,1777854,1780451,1780889,1783880,1785944 1691191,1754514,1772961,1778025,1780637,1781076,1784073,1788678 Gene ID= ENSG00000006831.9 TPM= 29.88 Transcript Type= protein_coding chr12 1929202 1936574 1929202 1936574 - ENST00000418006.1@LINC00940 ENST00000418006.1 lincRNA 1936454,1929202 1936574,1931430 Gene ID= ENSG00000235049.1 TPM= 5.43 Transcript Type= lincRNA chr12 1946054 2004511 1946054 2004511 - ENST00000280665.10@DCP1B ENST00000280665.10 protein_coding 2004282,1997935,1993264,1967844,1965558,1955432,1952416,1949086,1946054 2004511,1997975,1993391,1967910,1965693,1955560,1953288,1949334,1946286 Gene ID= ENSG00000151065.13 TPM= 38.03 Transcript Type= protein_coding chr12 1991456 2004535 1991456 2004535 - ENST00000535873.2@DCP1B ENST00000535873.2 protein_coding 2004282,1997935,1991456 2004535,1997975,1993391 Gene ID= ENSG00000151065.13 TPM= 3.62 Transcript Type= protein_coding chr12 2795919 2803970 2795919 2803970 + transcript81.chr12.nic@FKBP4 transcript81.chr12.nic protein_coding 2795919,2797138,2797729,2798706,2799088,2799850,2800039,2800392,2801117,2803151 2796964,2797282,2797871,2798826,2799244,2799940,2800122,2800577,2801356,2803970 Gene ID= ENSG00000004478.7 TPM= 8.15 Transcript Type= NA chr12 2812677 2832218 2812677 2832218 + transcript66.chr12.nnic@ITFG2 transcript66.chr12.nnic protein_coding 2812677,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090,2830834,2831932 2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2824252,2830885,2832218 Gene ID= ENSG00000111203.11 TPM= 1.81 Transcript Type= NA chr12 2812678 2839517 2812678 2839517 + transcript67.chr12.nic@ITFG2 transcript67.chr12.nic protein_coding 2812678,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090,2830834,2836745 2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2824252,2830885,2839517 Gene ID= ENSG00000111203.11 TPM= 4.53 Transcript Type= NA chr12 2812678 2828233 2812678 2828233 + transcript68.chr12.nnic@ITFG2 transcript68.chr12.nnic protein_coding 2812678,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090,2827778 2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2824252,2828233 Gene ID= ENSG00000111203.11 TPM= 1.81 Transcript Type= NA chr12 2812622 2825071 2812622 2825071 + ENST00000228799.6@ITFG2 ENST00000228799.6 protein_coding 2812622,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090 2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2823943,2825071 Gene ID= ENSG00000111203.11 TPM= 39.84 Transcript Type= protein_coding chr12 2812678 2825055 2812678 2825055 + transcript72.chr12.nic@ITFG2 transcript72.chr12.nic protein_coding 2812678,2817223,2817909,2818106,2820086,2820724,2821262,2821543,2821692,2822794,2823770,2824090 2812856,2817318,2817950,2818277,2820225,2820872,2821359,2821596,2821792,2822911,2824013,2825055 Gene ID= ENSG00000111203.11 TPM= 6.34 Transcript Type= NA chr12 2857684 2876941 2857684 2876941 - ENST00000359843.7@FOXM1 ENST00000359843.7 protein_coding 2876920,2873977,2872096,2868563,2866393,2865355,2864683,2864320,2857684 2876941,2874525,2872247,2868754,2866521,2865399,2864752,2864495,2859663 Gene ID= ENSG00000111206.12 TPM= 2.72 Transcript Type= protein_coding chr12 2877215 2889460 2877215 2889460 + ENST00000489288.6@RHNO1 ENST00000489288.6 protein_coding 2877215,2885283,2887911 2877282,2885534,2889460 Gene ID= ENSG00000171792.10 TPM= 19.47 Transcript Type= protein_coding chr12 2877208 2889440 2877208 2889440 + ENST00000464682.2@RHNO1 ENST00000464682.2 protein_coding 2877208,2887911 2877282,2889440 Gene ID= ENSG00000171792.10 TPM= 3.17 Transcript Type= processed_transcript chr12 2890859 2941143 2890859 2941143 + transcript101.chr12.nic@TULP3 transcript101.chr12.nic protein_coding 2890859,2909529,2922262,2930248,2931037,2933418,2934447,2937631,2938114,2939311 2890988,2909580,2922402,2930345,2931240,2933530,2934561,2937729,2938285,2941143 Gene ID= ENSG00000078246.16 TPM= 7.24 Transcript Type= NA chr12 2890897 2941140 2890897 2941140 + ENST00000448120.6@TULP3 ENST00000448120.6 protein_coding 2890897,2909529,2920763,2922262,2930248,2931037,2933418,2934447,2937631,2938114,2939311 2890988,2909580,2920922,2922402,2930345,2931240,2933530,2934561,2937729,2938285,2941140 Gene ID= ENSG00000078246.16 TPM= 25.36 Transcript Type= protein_coding chr12 2959801 3040675 2959801 3040675 + transcript108.chr12.nic@TEAD4 transcript108.chr12.nic protein_coding 2959801,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365 2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040675 Gene ID= ENSG00000197905.8 TPM= 6.34 Transcript Type= NA chr12 2959414 3040673 2959414 3040673 + ENST00000359864.6@TEAD4 ENST00000359864.6 protein_coding 2959414,2959948,2994738,3011004,3012170,3017398,3018545,3019115,3020634,3021844,3037968,3040107,3040365 2959481,2960040,2994992,3011068,3012232,3017526,3018588,3019170,3020773,3022017,3038108,3040259,3040673 Gene ID= ENSG00000197905.8 TPM= 4.53 Transcript Type= protein_coding chr12 3808861 3873453 3808861 3873453 - transcript119.chr12.nic@PARP11 transcript119.chr12.nic protein_coding 3873212,3863836,3829890,3828910,3826158,3822085,3821873,3814037,3808861 3873453,3863957,3830018,3829030,3826233,3822157,3822003,3814188,3812439 Gene ID= ENSG00000111224.13 TPM= 7.85 Transcript Type= NA chr12 3808861 3873355 3808861 3873355 - ENST00000427057.6@PARP11 ENST00000427057.6 protein_coding 3873212,3863836,3829890,3826158,3822085,3821873,3814037,3808861 3873355,3863957,3830018,3826233,3822157,3822003,3814188,3812439 Gene ID= ENSG00000111224.13 TPM= 12.38 Transcript Type= protein_coding chr12 3808861 3873374 3808861 3873374 - ENST00000228820.8@PARP11 ENST00000228820.8 protein_coding 3873212,3829890,3828910,3826158,3822085,3821873,3814037,3808861 3873374,3830018,3829030,3826233,3822157,3822003,3814188,3812439 Gene ID= ENSG00000111224.13 TPM= 4.23 Transcript Type= protein_coding chr12 4273772 4305350 4273772 4305350 + ENST00000261254.7@CCND2 ENST00000261254.7 protein_coding 4273772,4276005,4278760,4288842,4299860 4274235,4276220,4278919,4288990,4305350 Gene ID= ENSG00000118971.7 TPM= 160.28 Transcript Type= protein_coding chr12 4321205 4354593 4321205 4354593 + ENST00000179259.5@TIGAR ENST00000179259.5 protein_coding 4321205,4331280,4337039,4349819,4351267,4352260 4321303,4331317,4337160,4349896,4351377,4354593 Gene ID= ENSG00000078237.6 TPM= 10.87 Transcript Type= protein_coding chr12 4487728 4538471 4487728 4538471 - ENST00000261250.7@C12orf4 ENST00000261250.7 protein_coding 4538409,4536017,4534157,4529869,4525484,4525254,4518774,4518058,4517061,4505306,4500138,4491177,4490522,4487728 4538471,4536219,4534302,4530050,4525583,4525375,4518880,4518255,4517189,4505380,4500340,4491234,4490589,4489899 Gene ID= ENSG00000047621.11 TPM= 7.24 Transcript Type= protein_coding chr12 4604893 4614049 4604893 4614049 + transcript136.chr12.nic@DYRK4 transcript136.chr12.nic protein_coding 4604893,4607327,4610155,4612543,4613512 4605086,4607387,4610284,4612718,4614049 Gene ID= ENSG00000010219.13 TPM= 14.49 Transcript Type= NA chr12 4604897 4613873 4604897 4613873 + ENST00000545571.5@DYRK4 ENST00000545571.5 protein_coding 4604897,4610155,4612543,4613515 4605086,4610284,4612718,4613873 Gene ID= ENSG00000010219.13 TPM= 8.15 Transcript Type= retained_intron chr12 5432113 5495299 5432113 5495299 + ENST00000423158.3@NTF3 ENST00000423158.3 protein_coding 5432113,5494194 5432342,5495299 Gene ID= ENSG00000185652.11 TPM= 1.81 Transcript Type= protein_coding chr12 5948874 6124675 5948874 6124675 - ENST00000261405.9@VWF ENST00000261405.9 protein_coding 6124421,6123142,6121174,6110866,6110374,6095460,6075335,6073619,6072331,6071297,6065137,6064246,6062954,6057849,6056857,6052543,6046723,6044291,6036388,6034688,6031444,6029342,6025906,6025580,6023631,6022740,6021900,6018365,6016754,6016516,6016089,6013481,6012087,6011617,5996002,5994415,5993862,5991819,5985563,5985045,5983150,5981786,5976111,5971599,5969211,5968127,5967486,5953496,5952391,5951844,5949786,5948874 6124675,6123196,6121338,6110968,6110582,6095584,6075551,6073741,6072442,6071343,6065273,6064384,6063054,6058044,6057072,6052783,6046817,6044451,6036491,6034826,6031578,6029488,6026046,6025693,6023787,6022898,6022035,6019743,6016870,6016656,6016232,6013645,6012130,6011794,5996222,5994607,5994203,5992018,5985665,5985119,5983254,5981991,5976260,5971709,5969391,5968167,5967602,5953594,5952519,5951883,5949883,5949203 Gene ID= ENSG00000110799.13 TPM= 20.83 Transcript Type= protein_coding chr12 6200316 6238271 6200316 6238271 + ENST00000610354.4@CD9 ENST00000610354.4 protein_coding 6200316,6225426,6232632,6233412,6235229,6235475,6236192,6237763 6200565,6225534,6232729,6233486,6235327,6235565,6236275,6238271 Gene ID= ENSG00000010278.12 TPM= 607.62 Transcript Type= protein_coding chr12 6310688 6328498 6310688 6328498 + transcript164.chr12.nic@PLEKHG6 transcript164.chr12.nic protein_coding 6310688,6312159,6313629,6315005,6315554,6315869,6316255,6317303,6317547,6317857,6318301,6318745,6318993,6326428,6327254,6328136 6310848,6312364,6313784,6315169,6315649,6315919,6316404,6317413,6317696,6317994,6318420,6318877,6319108,6326573,6327946,6328498 Gene ID= ENSG00000008323.15 TPM= 1.81 Transcript Type= NA chr12 6310739 6328498 6310739 6328498 + transcript165.chr12.nnic@PLEKHG6 transcript165.chr12.nnic protein_coding 6310739,6312159,6313673,6315005,6315554,6315869,6316255,6317303,6317547,6317857,6318301,6318745,6318993,6326428,6327254,6328136 6310848,6312364,6313784,6315169,6315649,6315919,6316404,6317413,6317696,6317994,6318420,6318877,6319108,6326573,6327946,6328498 Gene ID= ENSG00000008323.15 TPM= 1.81 Transcript Type= NA chr12 6328757 6342114 6328757 6342114 - ENST00000162749.6@TNFRSF1A ENST00000162749.6 protein_coding 6341776,6334091,6333737,6333367,6333069,6330853,6330598,6330267,6329778,6328757 6342114,6334244,6333865,6333516,6333147,6330926,6330711,6330295,6330066,6329622 Gene ID= ENSG00000067182.7 TPM= 307.28 Transcript Type= protein_coding chr12 6346843 6375224 6346843 6375224 - ENST00000360168.7@SCNN1A ENST00000360168.7 protein_coding 6374368,6363443,6362051,6355777,6355272,6354750,6354438,6349327,6349164,6348950,6348727,6346843 6375224,6363710,6362241,6355880,6355435,6354848,6354555,6349405,6349221,6349005,6348802,6348253 Gene ID= ENSG00000111319.12 TPM= 8.15 Transcript Type= protein_coding chr12 6384033 6391563 6384033 6391563 + ENST00000228918.8@LTBR ENST00000228918.8 protein_coding 6384033,6384588,6385022,6385227,6386066,6386347,6388398,6388800,6390112,6390660 6384454,6384684,6385147,6385379,6386162,6386444,6388505,6388825,6390340,6391563 Gene ID= ENSG00000111321.10 TPM= 210.99 Transcript Type= protein_coding chr12 6439144 6451546 6439144 6451546 - transcript192.chr12.nnic@CD27-AS1 transcript192.chr12.nnic processed_transcript 6451469,6450893,6448640,6448037,6446961,6443546,6439144 6451546,6450980,6448737,6448150,6447087,6443717,6439676 Gene ID= ENSG00000215039.6 TPM= 2.26 Transcript Type= NA chr12 6439161 6451567 6439161 6451567 - ENST00000545339.5@CD27-AS1 ENST00000545339.5 processed_transcript 6451469,6450341,6448640,6448037,6446961,6443546,6439161 6451567,6450980,6448737,6448150,6447087,6443717,6439676 Gene ID= ENSG00000215039.6 TPM= 3.17 Transcript Type= antisense_RNA chr12 6447616 6451515 6447616 6451515 - ENST00000504270.2@CD27-AS1 ENST00000504270.2 processed_transcript 6451469,6448640,6447616 6451515,6448757,6448150 Gene ID= ENSG00000215039.6 TPM= 3.62 Transcript Type= retained_intron chr12 6444867 6451718 6444867 6451718 + ENST00000266557.3@CD27 ENST00000266557.3 protein_coding 6444867,6445424,6450173,6450541,6450895,6451268 6445231,6445555,6450352,6450630,6451014,6451718 Gene ID= ENSG00000139193.3 TPM= 1.81 Transcript Type= protein_coding chr12 6452494 6462320 6452494 6462320 + transcript198.chr12.nic@TAPBPL transcript198.chr12.nic protein_coding 6452494,6453067,6453447,6457406,6457669,6458645,6462034 6452619,6453297,6453716,6457543,6457744,6460938,6462320 Gene ID= ENSG00000139192.11 TPM= 2.72 Transcript Type= NA chr12 6452084 6462318 6452084 6462318 + ENST00000266556.7@TAPBPL ENST00000266556.7 protein_coding 6452084,6453067,6453447,6457406,6458645,6460855,6462034 6452312,6453297,6453716,6457744,6458947,6460938,6462318 Gene ID= ENSG00000139192.11 TPM= 67.92 Transcript Type= protein_coding chr12 6462237 6470987 6462237 6470987 - ENST00000361716.7@VAMP1 ENST00000361716.7 protein_coding 6470530,6466225,6465842,6462237 6470987,6466351,6466000,6464941 Gene ID= ENSG00000139190.16 TPM= 1.81 Transcript Type= protein_coding chr12 6492147 6493840 6492147 6493840 - ENST00000543164.5@MRPL51 ENST00000543164.5 protein_coding 6493459,6492862,6492147 6493840,6492972,6492467 Gene ID= ENSG00000111639.7 TPM= 6.34 Transcript Type= protein_coding chr12 6492103 6493841 6492103 6493841 - ENST00000537701.5@MRPL51 ENST00000537701.5 protein_coding 6493717,6492862,6492103 6493841,6492972,6492467 Gene ID= ENSG00000111639.7 TPM= 6.34 Transcript Type= protein_coding chr12 6493379 6531955 6493379 6531955 + ENST00000315579.9@NCAPD2 ENST00000315579.9 protein_coding 6493379,6495076,6509717,6510075,6510629,6511110,6514265,6514464,6514773,6516828,6517365,6517596,6517779,6520986,6521798,6522828,6523262,6525583,6526068,6526287,6526448,6526891,6527777,6527968,6528173,6528679,6528945,6529513,6529775,6530691,6530921,6531327 6494154,6495225,6509792,6510133,6510810,6511252,6514392,6514587,6514920,6517025,6517499,6517683,6517959,6521110,6522037,6523002,6523346,6525716,6526200,6526371,6526615,6527063,6527888,6528091,6528328,6528856,6529039,6529593,6529958,6530817,6531076,6531955 Gene ID= ENSG00000010292.12 TPM= 19.02 Transcript Type= protein_coding chr12 6533927 6538371 6533927 6538371 + ENST00000229239.9@GAPDH ENST00000229239.9 protein_coding 6533927,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101 6534569,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538371 Gene ID= ENSG00000111640.14 TPM= 4050.41 Transcript Type= protein_coding chr12 6534754 6538339 6534754 6538339 + ENST00000396859.5@GAPDH ENST00000396859.5 protein_coding 6534754,6536494,6536684,6536920,6537101,6537309,6537584,6538101 6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538339 Gene ID= ENSG00000111640.14 TPM= 7.13 Transcript Type= protein_coding chr12 6534534 6538359 6534534 6538359 + ENST00000396861.5@GAPDH ENST00000396861.5 protein_coding 6534534,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101 6534661,6534861,6536593,6536790,6537010,6537216,6537390,6537996,6538359 Gene ID= ENSG00000111640.14 TPM= 16.21 Transcript Type= protein_coding chr12 6534532 6538340 6534532 6538340 + ENST00000396856.5@GAPDH ENST00000396856.5 protein_coding 6534532,6534810,6536494,6536684,6536920,6537101,6537309,6537584,6538101 6534569,6534861,6536593,6536817,6537010,6537216,6537390,6537996,6538340 Gene ID= ENSG00000111640.14 TPM= 2.4 Transcript Type= protein_coding chr12 6539529 6556083 6539529 6556083 - transcript266.chr12.nnic@IFFO1 transcript266.chr12.nnic protein_coding 6555995,6555257,6551398,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539529 6556083,6555885,6551503,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 4.02 Transcript Type= NA chr12 6539529 6556083 6539529 6556083 - transcript270.chr12.nnic@IFFO1 transcript270.chr12.nnic protein_coding 6555995,6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539529 6556083,6555885,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 23.04 Transcript Type= NA chr12 6539529 6556094 6539529 6556094 - transcript271.chr12.nic@IFFO1 transcript271.chr12.nic protein_coding 6555257,6551398,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539529 6556094,6551503,6551001,6550790,6549896,6549484,6548545,6548160,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 3.12 Transcript Type= NA chr12 6539529 6556083 6539529 6556083 - transcript274.chr12.nnic@IFFO1 transcript274.chr12.nnic protein_coding 6555995,6555257,6551398,6550941,6550695,6549756,6548668,6548065,6541512,6539529 6556083,6555885,6551503,6551001,6550790,6549896,6548825,6548545,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 4.02 Transcript Type= NA chr12 6539529 6556083 6539529 6556083 - transcript277.chr12.nnic@IFFO1 transcript277.chr12.nnic protein_coding 6555995,6555257,6550941,6550695,6549756,6548668,6548065,6541512,6539529 6556083,6555885,6551001,6550790,6549896,6548825,6548545,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 3.12 Transcript Type= NA chr12 6539529 6556094 6539529 6556094 - transcript281.chr12.nic@IFFO1 transcript281.chr12.nic protein_coding 6555257,6550941,6550695,6549756,6548668,6548065,6541512,6539529 6556094,6551001,6550790,6549896,6548825,6548545,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 4.93 Transcript Type= NA chr12 6539529 6556094 6539529 6556094 - transcript282.chr12.nic@IFFO1 transcript282.chr12.nic protein_coding 6555257,6550941,6550695,6549756,6548668,6548065,6541512,6539529 6556094,6551001,6550790,6549896,6549484,6548545,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 4.02 Transcript Type= NA chr12 6539528 6556071 6539528 6556071 - ENST00000396840.6@IFFO1 ENST00000396840.6 protein_coding 6555257,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528 6556071,6551001,6550790,6549896,6548825,6548545,6548157,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 24.85 Transcript Type= protein_coding chr12 6539528 6556071 6539528 6556071 - ENST00000487279.6@IFFO1 ENST00000487279.6 protein_coding 6555257,6551398,6550941,6550695,6549756,6548668,6548425,6548065,6541512,6539528 6556071,6551503,6551001,6550790,6549896,6548825,6548545,6548160,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 4.93 Transcript Type= nonsense_mediated_decay chr12 6539577 6556071 6539577 6556071 - ENST00000488007.5@IFFO1 ENST00000488007.5 protein_coding 6555257,6551398,6550941,6550695,6549756,6548668,6548065,6541512,6539577 6556071,6551503,6551001,6550790,6549896,6548825,6548545,6541642,6540588 Gene ID= ENSG00000010295.19 TPM= 3.62 Transcript Type= retained_intron chr12 6556870 6568332 6556870 6568332 - ENST00000620535.4@NOP2 ENST00000620535.4 protein_coding 6568207,6567816,6566777,6566529,6566101,6564150,6563891,6563612,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556870 6568332,6567922,6566822,6566617,6566336,6564248,6563946,6563771,6563512,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642 Gene ID= ENSG00000111641.11 TPM= 1.13 Transcript Type= protein_coding chr12 6556871 6568286 6556871 6568286 - ENST00000399466.6@NOP2 ENST00000399466.6 protein_coding 6568139,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871 6568286,6567922,6566822,6566617,6566324,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642 Gene ID= ENSG00000111641.11 TPM= 1.13 Transcript Type= protein_coding chr12 6556871 6568691 6556871 6568691 - ENST00000541778.5@NOP2 ENST00000541778.5 protein_coding 6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871 6568691,6567922,6566822,6566617,6566324,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642 Gene ID= ENSG00000111641.11 TPM= 6.57 Transcript Type= protein_coding chr12 6556871 6568324 6556871 6568324 - ENST00000322166.9@NOP2 ENST00000322166.9 protein_coding 6568207,6567816,6566777,6566529,6566101,6563891,6563614,6563315,6563081,6561884,6561664,6560931,6560698,6560447,6560098,6556871 6568324,6567922,6566822,6566617,6566336,6563946,6563771,6563514,6563170,6561971,6561804,6561070,6560787,6560569,6560326,6557642 Gene ID= ENSG00000111641.11 TPM= 14.72 Transcript Type= protein_coding chr12 6570082 6614457 6570082 6614457 - transcript297.chr12.nnic@CHD4 transcript297.chr12.nnic protein_coding 6614335,6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570082 6614457,6607417,6606451,6602497,6602175,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693 Gene ID= ENSG00000111642.14 TPM= 8.63 Transcript Type= NA chr12 6570082 6606683 6570082 6606683 - transcript299.chr12.nic@CHD4 transcript299.chr12.nic protein_coding 6606583,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570082 6606683,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693 Gene ID= ENSG00000111642.14 TPM= 7.43 Transcript Type= NA chr12 6570083 6607424 6570083 6607424 - ENST00000544040.5@CHD4 ENST00000544040.5 protein_coding 6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083 6607424,6606451,6602497,6602154,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693 Gene ID= ENSG00000111642.14 TPM= 14.06 Transcript Type= protein_coding chr12 6570083 6607385 6570083 6607385 - ENST00000357008.6@CHD4 ENST00000357008.6 protein_coding 6607300,6606274,6602376,6601960,6601648,6601289,6600926,6600534,6600217,6599773,6598222,6597894,6596006,6595334,6594459,6593416,6593091,6592696,6592393,6591916,6591694,6591466,6588298,6587712,6587384,6583198,6583027,6582848,6582615,6582137,6581649,6581291,6581044,6578846,6578409,6578029,6577785,6573074,6570869,6570083 6607385,6606451,6602497,6602175,6601766,6601530,6601053,6600669,6600395,6600012,6598425,6598099,6596137,6595430,6594650,6593616,6593228,6592817,6592566,6592057,6591825,6591583,6588422,6587949,6587559,6583378,6583113,6582936,6582748,6582281,6581814,6581388,6581173,6578917,6578546,6578137,6577917,6573269,6571032,6570693 Gene ID= ENSG00000111642.14 TPM= 8.63 Transcript Type= protein_coding chr12 6618835 6636447 6618835 6636447 - ENST00000329858.8@LPAR5 ENST00000329858.8 protein_coding 6635907,6618835 6636447,6621464 Gene ID= ENSG00000184574.9 TPM= 5.43 Transcript Type= protein_coding chr12 6618835 6631649 6618835 6631649 - ENST00000431922.1@LPAR5 ENST00000431922.1 protein_coding 6631585,6618835 6631649,6621464 Gene ID= ENSG00000184574.9 TPM= 5.43 Transcript Type= protein_coding chr12 6650280 6663148 6650280 6663148 - ENST00000341550.8@ING4 ENST00000341550.8 protein_coding 6663065,6656727,6653230,6652936,6652662,6652271,6651324,6650280 6663148,6656798,6653396,6653050,6652767,6652418,6651385,6651234 Gene ID= ENSG00000111653.19 TPM= 28.68 Transcript Type= protein_coding chr12 6650585 6663125 6650585 6663125 - transcript313.chr12.nic@ING4 transcript313.chr12.nic protein_coding 6663065,6653230,6652936,6652662,6652271,6651324,6650585 6663125,6653396,6653050,6652767,6652418,6651385,6651234 Gene ID= ENSG00000111653.19 TPM= 3.32 Transcript Type= NA chr12 6650539 6663142 6650539 6663142 - ENST00000619641.4@ING4 ENST00000619641.4 protein_coding 6663065,6656727,6652936,6652662,6652271,6651324,6650539 6663142,6656798,6653050,6652770,6652418,6651385,6651234 Gene ID= ENSG00000111653.19 TPM= 1.51 Transcript Type= protein_coding chr12 6666478 6689105 6666478 6689105 - transcript327.chr12.nnic@ZNF384 transcript327.chr12.nnic protein_coding 6688994,6688167,6679455,6678946,6678663,6678127,6673216,6672350,6670760,6669031,6666478 6689105,6688226,6679525,6679183,6678710,6678460,6673440,6672532,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 3.2 Transcript Type= NA chr12 6666478 6689465 6666478 6689465 - transcript331.chr12.nic@ZNF384 transcript331.chr12.nic protein_coding 6689368,6688167,6679455,6678946,6678663,6678127,6677167,6673216,6670760,6669031,6666478 6689465,6688226,6679525,6679183,6678710,6678460,6677259,6673440,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 2.14 Transcript Type= NA chr12 6666478 6688981 6666478 6688981 - transcript334.chr12.nic@ZNF384 transcript334.chr12.nic protein_coding 6688167,6679455,6678946,6678663,6678127,6673216,6672350,6670760,6669031,6666478 6688981,6679525,6679183,6678710,6678460,6673440,6672532,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 5.91 Transcript Type= NA chr12 6666478 6688981 6666478 6688981 - transcript335.chr12.nnic@ZNF384 transcript335.chr12.nnic protein_coding 6688167,6679455,6678946,6678663,6678127,6673216,6672350,6670760,6669031,6666478 6688981,6679525,6679183,6678801,6678460,6673440,6672532,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 2.14 Transcript Type= NA chr12 6666478 6688924 6666478 6688924 - transcript343.chr12.nic@ZNF384 transcript343.chr12.nic protein_coding 6688837,6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666478 6688924,6688226,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 3.65 Transcript Type= NA chr12 6666478 6689498 6666478 6689498 - transcript346.chr12.nic@ZNF384 transcript346.chr12.nic protein_coding 6689368,6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666478 6689498,6688226,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 7.27 Transcript Type= NA chr12 6666478 6689295 6666478 6689295 - transcript349.chr12.nic@ZNF384 transcript349.chr12.nic protein_coding 6689098,6688167,6679455,6678127,6673216,6672350,6670760,6669031,6666478 6689295,6688226,6679525,6679183,6673440,6672532,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 2.14 Transcript Type= NA chr12 6666478 6688981 6666478 6688981 - transcript351.chr12.nic@ZNF384 transcript351.chr12.nic protein_coding 6688167,6679455,6678946,6678663,6678127,6673216,6670760,6669031,6666478 6688981,6679525,6679183,6678710,6678460,6673440,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 7.27 Transcript Type= NA chr12 6666730 6689292 6666730 6689292 - ENST00000361959.7@ZNF384 ENST00000361959.7 protein_coding 6689098,6688167,6679455,6678946,6678663,6678127,6673216,6672350,6670760,6669031,6666730 6689292,6688226,6679525,6679183,6678710,6678460,6673440,6672532,6670838,6669189,6668115 Gene ID= ENSG00000126746.17 TPM= 7.05 Transcript Type= protein_coding chr12 6724014 6731873 6724014 6731873 + ENST00000626119.2@COPS7A ENST00000626119.2 protein_coding 6724014,6724614,6728223,6729247,6730402,6730669,6731000 6724152,6724818,6728311,6729449,6730507,6730820,6731873 Gene ID= ENSG00000111652.9 TPM= 2.49 Transcript Type= protein_coding chr12 6724071 6731807 6724071 6731807 + ENST00000229251.7@COPS7A ENST00000229251.7 protein_coding 6724071,6724614,6727926,6728223,6729247,6730402,6730669,6731000 6724152,6724818,6728001,6728311,6729449,6730507,6730820,6731807 Gene ID= ENSG00000111652.9 TPM= 1.81 Transcript Type= protein_coding chr12 6724079 6731828 6724079 6731828 + ENST00000539735.5@COPS7A ENST00000539735.5 protein_coding 6724079,6724614,6727926,6728223,6729247,6730402,6730669,6731000 6724250,6724818,6728001,6728311,6729449,6730507,6730820,6731828 Gene ID= ENSG00000111652.9 TPM= 31.69 Transcript Type= protein_coding chr12 6724119 6731824 6724119 6731824 + ENST00000543939.5@COPS7A ENST00000543939.5 protein_coding 6724119,6724614,6728223,6729247,6730402,6730669,6731000 6724266,6724818,6728311,6729449,6730507,6730820,6731824 Gene ID= ENSG00000111652.9 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr12 6724287 6731875 6724287 6731875 + ENST00000534947.5@COPS7A ENST00000534947.5 protein_coding 6724287,6727926,6728223,6729247,6730402,6730669,6731000 6724818,6728001,6728311,6729449,6730507,6730820,6731875 Gene ID= ENSG00000111652.9 TPM= 15.17 Transcript Type= protein_coding chr12 6724298 6731842 6724298 6731842 + ENST00000534877.5@COPS7A ENST00000534877.5 protein_coding 6724298,6724614,6727926,6728223,6729247,6730402,6730669,6731000 6724330,6724818,6728001,6728311,6729449,6730507,6730820,6731842 Gene ID= ENSG00000111652.9 TPM= 1.81 Transcript Type= protein_coding chr12 6747996 6753555 6747996 6753555 - ENST00000203630.9@MLF2 ENST00000203630.9 protein_coding 6752939,6752285,6751925,6751641,6750713,6750177,6749848,6748770,6747996 6753555,6752362,6752054,6751676,6750766,6750305,6750007,6748982,6748547 Gene ID= ENSG00000089693.10 TPM= 349.99 Transcript Type= protein_coding chr12 6748004 6752916 6748004 6752916 - ENST00000435120.5@MLF2 ENST00000435120.5 protein_coding 6752882,6752285,6751925,6751641,6750713,6750177,6749848,6748770,6748004 6752916,6752362,6752054,6751676,6750766,6750305,6750007,6748982,6748547 Gene ID= ENSG00000089693.10 TPM= 19.92 Transcript Type= protein_coding chr12 6765474 6770950 6765474 6770950 + transcript386.chr12.nnic@PTMS transcript386.chr12.nnic protein_coding 6765474,6769603,6769921,6770157,6770392 6765524,6769674,6769999,6770218,6770950 Gene ID= ENSG00000159335.15 TPM= 61.58 Transcript Type= NA chr12 6789472 6820808 6789472 6820808 + ENST00000011653.8@CD4 ENST00000011653.8 protein_coding 6789472,6800072,6800307,6814142,6814759,6816056,6817130,6818421,6818847,6819299 6789662,6800187,6800471,6814300,6814992,6816403,6817330,6818542,6818914,6820808 Gene ID= ENSG00000010610.9 TPM= 44.37 Transcript Type= protein_coding chr12 6789537 6820812 6789537 6820812 + transcript396.chr12.nic@CD4 transcript396.chr12.nic protein_coding 6789537,6814142,6814759,6816056,6817130,6818421,6818847,6819299 6789662,6814463,6814992,6816403,6817330,6818542,6818914,6820812 Gene ID= ENSG00000010610.9 TPM= 5.43 Transcript Type= NA chr12 6828410 6839851 6828410 6839851 + ENST00000290510.9@P3H3 ENST00000290510.9 protein_coding 6828410,6829859,6830353,6830639,6831216,6831825,6833592,6833742,6833925,6836985,6837423,6837732,6837958,6839000,6839297 6828938,6830011,6830554,6830770,6831352,6831914,6833644,6833809,6834049,6837086,6837573,6837849,6838033,6839140,6839851 Gene ID= ENSG00000110811.19 TPM= 28.98 Transcript Type= protein_coding chr12 6852148 6866620 6852148 6866620 + ENST00000389231.9@USP5 ENST00000389231.9 protein_coding 6852148,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984 6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863308,6863973,6864195,6864875,6865248,6866620 Gene ID= ENSG00000111667.13 TPM= 308.18 Transcript Type= protein_coding chr12 6852128 6866629 6852128 6866629 + ENST00000229268.12@USP5 ENST00000229268.12 protein_coding 6852128,6855401,6855755,6856017,6856305,6856707,6857629,6858424,6859470,6860151,6860366,6860953,6861443,6862470,6863186,6863830,6864050,6864722,6865164,6865984 6852290,6855526,6855821,6856150,6856450,6856891,6857723,6858617,6859541,6860238,6860491,6861106,6861617,6862558,6863377,6863973,6864195,6864875,6865248,6866629 Gene ID= ENSG00000111667.13 TPM= 29.73 Transcript Type= protein_coding chr12 6867495 6870984 6867495 6870984 + transcript424.chr12.nnic@TPI1 transcript424.chr12.nnic protein_coding 6867495,6868864,6869099,6869258,6869688,6870055,6870265 6867681,6868987,6869183,6869390,6869744,6870136,6870984 Gene ID= ENSG00000111669.14 TPM= 8.85 Transcript Type= NA chr12 6867535 6870984 6867535 6870984 + transcript429.chr12.nic@TPI1 transcript429.chr12.nic protein_coding 6867535,6868864,6869099,6869258,6869688,6870049,6870265 6868323,6868987,6869183,6869390,6869773,6870136,6870984 Gene ID= ENSG00000111669.14 TPM= 20.65 Transcript Type= NA chr12 6867495 6870984 6867495 6870984 + transcript431.chr12.nic@TPI1 transcript431.chr12.nic protein_coding 6867495,6868864,6869099,6869258,6870049,6870265 6867681,6868987,6869183,6869773,6870136,6870984 Gene ID= ENSG00000111669.14 TPM= 9.1 Transcript Type= NA chr12 6867530 6870838 6867530 6870838 + transcript434.chr12.nic@TPI1 transcript434.chr12.nic protein_coding 6867530,6869099,6869258,6869688,6870049,6870265 6868987,6869183,6869390,6869773,6870136,6870838 Gene ID= ENSG00000111669.14 TPM= 27.29 Transcript Type= NA chr12 6867530 6870908 6867530 6870908 + transcript436.chr12.nic@TPI1 transcript436.chr12.nic protein_coding 6867530,6869099,6869258,6870049,6870265 6868987,6869183,6869773,6870136,6870908 Gene ID= ENSG00000111669.14 TPM= 3.07 Transcript Type= NA chr12 6867530 6870835 6867530 6870835 + transcript437.chr12.nic@TPI1 transcript437.chr12.nic protein_coding 6867530,6869099,6869688,6870049,6870265 6868987,6869390,6869773,6870136,6870835 Gene ID= ENSG00000111669.14 TPM= 3.75 Transcript Type= NA chr12 6867530 6870835 6867530 6870835 + transcript440.chr12.nic@TPI1 transcript440.chr12.nic protein_coding 6867530,6869099,6869258,6870265 6868987,6869183,6870136,6870835 Gene ID= ENSG00000111669.14 TPM= 2.81 Transcript Type= NA chr12 6867530 6870835 6867530 6870835 + transcript442.chr12.nic@TPI1 transcript442.chr12.nic protein_coding 6867530,6869099,6870049,6870265 6868987,6869773,6870136,6870835 Gene ID= ENSG00000111669.14 TPM= 3.07 Transcript Type= NA chr12 6867531 6870835 6867531 6870835 + transcript443.chr12.nic@TPI1 transcript443.chr12.nic protein_coding 6867531,6869688,6870049,6870265 6869390,6869773,6870136,6870835 Gene ID= ENSG00000111669.14 TPM= 5.56 Transcript Type= NA chr12 6867530 6870837 6867530 6870837 + transcript444.chr12.nic@TPI1 transcript444.chr12.nic protein_coding 6867530,6869099,6870265 6868987,6870136,6870837 Gene ID= ENSG00000111669.14 TPM= 5.52 Transcript Type= NA chr12 6870935 6873336 6870935 6873336 - ENST00000524270.5@SPSB2 ENST00000524270.5 protein_coding 6873246,6872238,6870935 6873336,6872997,6871319 Gene ID= ENSG00000111671.9 TPM= 11.77 Transcript Type= protein_coding chr12 6904733 6914229 6904733 6914229 + ENST00000007969.12@LRRC23 ENST00000007969.12 protein_coding 6904733,6905585,6905845,6906409,6907315,6909890,6912730,6913891 6904903,6905759,6905954,6906662,6907445,6910026,6913027,6914229 Gene ID= ENSG00000010626.14 TPM= 4.53 Transcript Type= protein_coding chr12 6904791 6914194 6904791 6914194 + ENST00000451681.5@LRRC23 ENST00000451681.5 protein_coding 6904791,6905585,6906409,6907315,6909890,6912730,6913891 6904903,6905759,6906662,6907445,6910026,6913027,6914194 Gene ID= ENSG00000010626.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr12 6904834 6914229 6904834 6914229 + ENST00000428946.5@LRRC23 ENST00000428946.5 protein_coding 6904834,6905585,6906409,6907315,6913891 6904903,6905759,6906662,6907445,6914229 Gene ID= ENSG00000010626.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr12 6914450 6923696 6914450 6923696 + ENST00000229277.5@ENO2 ENST00000229277.5 protein_coding 6914450,6915821,6916417,6916671,6917038,6917581,6917940,6919566,6921581,6922056,6922344,6922731 6914659,6915917,6916512,6916729,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923696 Gene ID= ENSG00000111674.8 TPM= 122.09 Transcript Type= protein_coding chr12 6914495 6923698 6914495 6923698 + transcript465.chr12.nic@ENO2 transcript465.chr12.nic protein_coding 6914495,6915821,6916417,6916671,6917581,6917940,6919566,6921581,6922056,6922344,6922731 6914659,6915917,6916512,6917107,6917714,6918162,6919763,6921782,6922164,6922402,6923698 Gene ID= ENSG00000111674.8 TPM= 7.09 Transcript Type= NA chr12 6938701 6942320 6938701 6942320 + transcript476.chr12.nnic@ATN1 transcript476.chr12.nnic protein_coding 6938701,6940453,6940880,6941374,6941747 6939177,6940503,6941023,6941554,6942320 Gene ID= ENSG00000111676.14 TPM= 15.39 Transcript Type= NA chr12 6943834 6946002 6943834 6946002 + ENST00000537087.5@C12orf57 ENST00000537087.5 protein_coding 6943834,6944476,6945771 6944173,6944565,6946002 Gene ID= ENSG00000111678.10 TPM= 6.79 Transcript Type= protein_coding chr12 6944023 6946002 6944023 6946002 + ENST00000229281.5@C12orf57 ENST00000229281.5 protein_coding 6944023,6944476,6945771 6944173,6944652,6946002 Gene ID= ENSG00000111678.10 TPM= 53.88 Transcript Type= protein_coding chr12 6946578 6961316 6946578 6961316 + transcript484.chr12.nic@PTPN6 transcript484.chr12.nic protein_coding 6946578,6951912,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126 6946739,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961316 Gene ID= ENSG00000111679.16 TPM= 3.55 Transcript Type= NA chr12 6946575 6961316 6946575 6961316 + transcript488.chr12.nnic@PTPN6 transcript488.chr12.nnic protein_coding 6946575,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126 6946739,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961316 Gene ID= ENSG00000111679.16 TPM= 4.46 Transcript Type= NA chr12 6946577 6961316 6946577 6961316 + ENST00000399448.5@PTPN6 ENST00000399448.5 protein_coding 6946577,6951609,6951983,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126 6946739,6951731,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961316 Gene ID= ENSG00000111679.16 TPM= 46.11 Transcript Type= protein_coding chr12 6951356 6961316 6951356 6961316 + ENST00000416215.6@PTPN6 ENST00000416215.6 protein_coding 6951356,6951609,6954805,6955151,6955372,6955660,6956142,6956419,6957654,6957919,6959927,6960088,6960344,6960806,6961126 6951520,6952177,6954994,6955267,6955485,6955756,6956221,6956568,6957785,6958073,6959994,6960239,6960435,6960945,6961316 Gene ID= ENSG00000111679.16 TPM= 1.74 Transcript Type= retained_intron chr12 6959322 6961316 6959322 6961316 + ENST00000539029.5@PTPN6 ENST00000539029.5 protein_coding 6959322,6959927,6960088,6960344,6960806,6961126 6959383,6959994,6960239,6960435,6960945,6961316 Gene ID= ENSG00000111679.16 TPM= 1.06 Transcript Type= processed_transcript chr12 6965352 6970825 6965352 6970825 - ENST00000535923.5@PHB2 ENST00000535923.5 protein_coding 6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966424,6965911,6965352 6970825,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965916,6965712 Gene ID= ENSG00000215021.8 TPM= 68.52 Transcript Type= protein_coding chr12 6965354 6970623 6965354 6970623 - ENST00000399433.6@PHB2 ENST00000399433.6 protein_coding 6970417,6970196,6969498,6968411,6967892,6967676,6967171,6966423,6965354 6970623,6970280,6969577,6968595,6968021,6967779,6967248,6966500,6965714 Gene ID= ENSG00000215021.8 TPM= 15.1 Transcript Type= protein_coding chr12 6970893 6979941 6970893 6979941 + ENST00000599672.5@EMG1 ENST00000599672.5 protein_coding 6970893,6974339,6974552,6975090,6975229,6975696 6971091,6974440,6974693,6975148,6975378,6979941 Gene ID= ENSG00000126749.14 TPM= 26.26 Transcript Type= protein_coding chr12 6976186 7018510 6976186 7018510 - ENST00000261407.8@LPCAT3 ENST00000261407.8 protein_coding 7018274,6983432,6982676,6981811,6981595,6981004,6979471,6978603,6978341,6977598,6977367,6977134,6976186 7018510,6983539,6982782,6981904,6981632,6981182,6979579,6978689,6978507,6977745,6977525,6977262,6976891 Gene ID= ENSG00000111684.10 TPM= 244.04 Transcript Type= protein_coding chr12 7060515 7071032 7060515 7071032 + ENST00000328916.7@C1S ENST00000328916.7 protein_coding 7060515,7061752,7062475,7062890,7064267,7065100,7065817,7066518,7067039,7067643,7068456,7069855 7060877,7061917,7062682,7063067,7064392,7065299,7065970,7066633,7067117,7067771,7068530,7071032 Gene ID= ENSG00000182326.14 TPM= 485.35 Transcript Type= protein_coding chr12 7080203 7092600 7080203 7092600 - transcript543.chr12.nic@C1R transcript543.chr12.nic protein_coding 7092387,7091452,7090056,7089587,7088839,7088610,7086379,7085861,7082032,7080203 7092600,7091680,7090248,7089733,7089489,7088731,7086457,7086016,7082106,7081301 Gene ID= ENSG00000159403.15 TPM= 37.73 Transcript Type= NA chr12 7080209 7092607 7080209 7092607 - ENST00000542285.5@C1R ENST00000542285.5 protein_coding 7092387,7091452,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080209 7092607,7091680,7090248,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301 Gene ID= ENSG00000159403.15 TPM= 625.89 Transcript Type= protein_coding chr12 7080421 7091892 7080421 7091892 - ENST00000536053.6@C1R ENST00000536053.6 protein_coding 7091773,7091452,7090056,7089587,7089293,7088839,7088610,7086379,7085861,7082032,7080421 7091892,7091680,7090248,7089733,7089489,7088986,7088731,7086457,7086016,7082106,7081301 Gene ID= ENSG00000159403.15 TPM= 13.74 Transcript Type= protein_coding chr12 7098293 7109335 7098293 7109335 - transcript558.chr12.nic@C1RL transcript558.chr12.nic protein_coding 7109110,7108251,7101898,7099901,7099686,7098293 7109335,7108479,7102087,7100026,7099760,7098412 Gene ID= ENSG00000139178.10 TPM= 15.85 Transcript Type= NA chr12 7094554 7109273 7094554 7109273 - ENST00000266542.8@C1RL ENST00000266542.8 protein_coding 7109110,7108251,7101898,7099901,7099686,7094554 7109273,7108479,7102087,7100026,7099760,7097163 Gene ID= ENSG00000139178.10 TPM= 109.12 Transcript Type= protein_coding chr12 7129207 7158933 7129207 7158933 + transcript565.chr12.nnic@CLSTN3 transcript565.chr12.nnic protein_coding 7129207,7130580,7133024,7133573,7135327,7135804,7136206,7136829,7137955,7141242,7142086,7142869,7143163,7148972,7149523,7150544,7150928,7157489,7157941 7129383,7130712,7133146,7133768,7135535,7135953,7136391,7137110,7138067,7141404,7142139,7143026,7143311,7149198,7149693,7150689,7151063,7157691,7158933 Gene ID= ENSG00000139182.13 TPM= 7.7 Transcript Type= NA chr12 7130199 7158945 7130199 7158945 + ENST00000266546.10@CLSTN3 ENST00000266546.10 protein_coding 7130199,7133024,7133573,7135327,7135804,7136206,7136829,7137955,7141242,7142086,7142869,7143163,7148972,7149523,7150544,7150928,7157489,7157941 7130712,7133146,7133768,7135535,7135953,7136391,7137110,7138067,7141404,7142139,7143026,7143311,7149198,7149693,7150689,7151063,7157691,7158945 Gene ID= ENSG00000139182.13 TPM= 50.26 Transcript Type= protein_coding chr12 7188728 7211482 7188728 7211482 + transcript574.chr12.nic@PEX5 transcript574.chr12.nic protein_coding 7188728,7190362,7190888,7191226,7191569,7199011,7201751,7202241,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022 7188810,7190524,7190923,7191358,7191700,7199113,7201841,7202351,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211482 Gene ID= ENSG00000139197.10 TPM= 4.53 Transcript Type= NA chr12 7189677 7211482 7189677 7211482 + transcript576.chr12.nic@PEX5 transcript576.chr12.nic protein_coding 7189677,7190362,7190888,7191226,7191569,7199011,7201751,7202241,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022 7189750,7190524,7190923,7191358,7191700,7199113,7201841,7202351,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211482 Gene ID= ENSG00000139197.10 TPM= 9.96 Transcript Type= NA chr12 7188728 7211482 7188728 7211482 + transcript581.chr12.nic@PEX5 transcript581.chr12.nic protein_coding 7188728,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022 7188810,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211482 Gene ID= ENSG00000139197.10 TPM= 5.43 Transcript Type= NA chr12 7189584 7211483 7189584 7211483 + ENST00000266563.9@PEX5 ENST00000266563.9 protein_coding 7189584,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022 7189750,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211483 Gene ID= ENSG00000139197.10 TPM= 17.21 Transcript Type= protein_coding chr12 7189849 7211482 7189849 7211482 + transcript587.chr12.nic@PEX5 transcript587.chr12.nic protein_coding 7189849,7190362,7190888,7191226,7191569,7199011,7201751,7202612,7203432,7207659,7208010,7208457,7209005,7209683,7210022 7189980,7190524,7190923,7191358,7191700,7199113,7201841,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211482 Gene ID= ENSG00000139197.10 TPM= 3.62 Transcript Type= NA chr12 7190361 7211480 7190361 7211480 + ENST00000266564.7@PEX5 ENST00000266564.7 protein_coding 7190361,7190888,7191226,7191569,7199011,7201751,7202241,7202612,7203456,7207659,7208010,7208457,7209005,7209683,7210022 7190524,7190923,7191358,7191700,7199113,7201841,7202351,7202704,7203551,7207802,7208080,7208669,7209170,7209840,7211480 Gene ID= ENSG00000139197.10 TPM= 3.62 Transcript Type= protein_coding chr12 7354960 7444185 7354960 7444185 - ENST00000313599.7@CD163L1 ENST00000313599.7 protein_coding 7444097,7441154,7433374,7432416,7406532,7403535,7398264,7396095,7378978,7375700,7375281,7374831,7374442,7373320,7369357,7368933,7368087,7367236,7357380,7354960 7444185,7441246,7433694,7432736,7406852,7403855,7398584,7396415,7379298,7376014,7375595,7374923,7374756,7373640,7369665,7368965,7368197,7367331,7357486,7355130 Gene ID= ENSG00000177675.8 TPM= 6.34 Transcript Type= protein_coding chr12 7470813 7503893 7470813 7503893 - ENST00000359156.8@CD163 ENST00000359156.8 protein_coding 7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7481161,7479860,7470813 7503893,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7479996,7471397 Gene ID= ENSG00000177575.12 TPM= 71.09 Transcript Type= protein_coding chr12 7470816 7503798 7470816 7503798 - transcript603.chr12.nic@CD163 transcript603.chr12.nic protein_coding 7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7479860,7470816 7503798,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7479996,7471397 Gene ID= ENSG00000177575.12 TPM= 12.22 Transcript Type= NA chr12 7470816 7503776 7470816 7503776 - ENST00000537044.1@CD163 ENST00000537044.1 protein_coding 7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7479860,7470816 7503776,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7471397 Gene ID= ENSG00000177575.12 TPM= 6.34 Transcript Type= retained_intron chr12 7471180 7503776 7471180 7503776 - ENST00000432237.2@CD163 ENST00000432237.2 protein_coding 7503645,7502478,7501139,7498868,7496813,7495081,7487773,7487359,7486894,7486499,7485096,7483367,7482966,7482643,7481161,7479860,7471180 7503776,7502564,7501462,7499188,7497133,7495401,7488087,7487673,7486986,7486813,7485416,7483675,7483004,7482762,7481256,7479913,7471397 Gene ID= ENSG00000177575.12 TPM= 191.98 Transcript Type= protein_coding chr12 7689782 7695776 7689782 7695776 - ENST00000329913.3@GDF3 ENST00000329913.3 protein_coding 7695461,7689782 7695776,7690704 Gene ID= ENSG00000184344.3 TPM= 2.72 Transcript Type= protein_coding chr12 7919230 7936275 7919230 7936275 - ENST00000075120.11@SLC2A3 ENST00000075120.11 protein_coding 7936020,7933810,7932987,7931245,7930480,7929684,7925844,7924410,7922821,7919230 7936275,7933902,7933147,7931485,7930642,7929871,7925948,7924511,7923024,7921631 Gene ID= ENSG00000059804.15 TPM= 11.77 Transcript Type= protein_coding chr12 8032674 8051581 8032674 8051581 + transcript616.chr12.nnic@FOXJ2 transcript616.chr12.nnic protein_coding 8032674,8039819,8042658,8043701,8043951,8044760,8047882,8048697,8049362,8050522,8051155 8033833,8040165,8042732,8043769,8044091,8044958,8048289,8048798,8049571,8050620,8051581 Gene ID= ENSG00000065970.8 TPM= 1.81 Transcript Type= NA chr12 8032703 8055503 8032703 8055503 + ENST00000162391.7@FOXJ2 ENST00000162391.7 protein_coding 8032703,8039819,8042658,8043701,8043951,8044760,8047882,8048697,8049362,8050522,8052762 8033833,8040165,8042732,8043769,8044091,8044958,8048289,8048798,8049571,8050620,8055503 Gene ID= ENSG00000065970.8 TPM= 12.68 Transcript Type= protein_coding chr12 8082268 8097769 8082268 8097769 + ENST00000450991.6@NECAP1 ENST00000450991.6 protein_coding 8082268,8089936,8090195,8092676,8092872,8095601,8096042 8082383,8090036,8090299,8092784,8093055,8095703,8097769 Gene ID= ENSG00000089818.17 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr12 8232215 8242970 8232215 8242970 - transcript630.chr12.nnic@FAM86FP transcript630.chr12.nnic transcribed_unprocessed_pseudogene 8242752,8238667,8235601,8235253,8234276,8232215 8242970,8238749,8235734,8235518,8234425,8232607 Gene ID= ENSG00000164845.16 TPM= 1.81 Transcript Type= NA chr12 8232215 8242970 8232215 8242970 - transcript634.chr12.nnic@FAM86FP transcript634.chr12.nnic transcribed_unprocessed_pseudogene 8242752,8238667,8235601,8234276,8232215 8242970,8238749,8235734,8234425,8232607 Gene ID= ENSG00000164845.16 TPM= 1.81 Transcript Type= NA chr12 8645956 8662812 8645956 8662812 - ENST00000359478.6@MFAP5 ENST00000359478.6 protein_coding 8662627,8662047,8660863,8655786,8655415,8654437,8651662,8650502,8649501,8645956 8662812,8662106,8660898,8655830,8655447,8654481,8651691,8650589,8649574,8648203 Gene ID= ENSG00000197614.10 TPM= 8.15 Transcript Type= protein_coding chr12 8914553 8940404 8914553 8940404 + ENST00000543824.5@PHC1 ENST00000543824.5 protein_coding 8914553,8916061,8917630,8919756,8920985,8921601,8922633,8930435,8932563,8933865,8934267,8935124,8936856,8937176,8937829,8939305 8914827,8916069,8917791,8919866,8921065,8921750,8922788,8930927,8933350,8934012,8934478,8935238,8936964,8937326,8938060,8940404 Gene ID= ENSG00000111752.10 TPM= 7.24 Transcript Type= protein_coding chr12 8940380 8949651 8940380 8949651 - transcript646.chr12.nic@M6PR transcript646.chr12.nic protein_coding 8949488,8946229,8945418,8943801,8943405,8942416,8940380 8949651,8946405,8945584,8943910,8943535,8942542,8940869 Gene ID= ENSG00000003056.7 TPM= 5.43 Transcript Type= NA chr12 8940365 8949955 8940365 8949955 - ENST00000000412.7@M6PR ENST00000000412.7 protein_coding 8949488,8946229,8945418,8943801,8943405,8942416,8940365 8949955,8946405,8945584,8943910,8943535,8942542,8941940 Gene ID= ENSG00000003056.7 TPM= 181.41 Transcript Type= protein_coding chr12 8940380 8949670 8940380 8949670 - transcript654.chr12.nic@M6PR transcript654.chr12.nic protein_coding 8949488,8946229,8945418,8943801,8943405,8940380 8949670,8946405,8945584,8943910,8943535,8942542 Gene ID= ENSG00000003056.7 TPM= 12.07 Transcript Type= NA chr12 9067712 9116157 9067712 9116157 - ENST00000318602.11@A2M ENST00000318602.11 protein_coding 9115764,9113360,9112377,9112159,9110314,9109867,9109321,9107524,9106491,9106236,9104239,9101447,9101144,9099381,9098607,9095539,9094973,9093465,9091201,9090356,9089902,9089200,9080094,9079639,9079244,9077701,9077346,9076756,9074560,9072653,9072359,9070488,9069745,9068740,9068183,9067712 9116157,9113543,9112536,9112211,9110334,9110035,9109405,9107644,9106605,9106345,9104400,9101674,9101207,9099523,9098756,9095700,9095084,9093579,9091429,9090482,9090023,9089251,9080177,9079815,9079331,9077857,9077420,9076936,9074783,9072871,9072486,9070578,9069813,9068842,9068224,9067839 Gene ID= ENSG00000175899.14 TPM= 865.7 Transcript Type= protein_coding chr12 9240003 9243052 9240003 9243052 + ENST00000427111.4@LINC00987 ENST00000427111.4 lincRNA 9240003,9241118 9240539,9243052 Gene ID= ENSG00000237248.4 TPM= 3.62 Transcript Type= lincRNA chr12 9648145 9658407 9648145 9658407 + transcript695.chr12.nic@AC010186.2 transcript695.chr12.nic transcribed_unprocessed_pseudogene 9648145,9653683,9655873,9656568,9656921 9648933,9653808,9655979,9656697,9658407 Gene ID= ENSG00000256594.8 TPM= 1.81 Transcript Type= NA chr12 9752486 9760901 9752486 9760901 - ENST00000228434.7@CD69 ENST00000228434.7 protein_coding 9760757,9756297,9755062,9754587,9752486 9760901,9756419,9755261,9754690,9753589 Gene ID= ENSG00000110848.8 TPM= 3.62 Transcript Type= protein_coding chr12 10116777 10130241 10116777 10130241 - ENST00000353231.9@CLEC7A ENST00000353231.9 protein_coding 10129980,10127747,10125297,10123245,10116777 10130241,10127845,10125448,10123363,10118590 Gene ID= ENSG00000172243.17 TPM= 4.53 Transcript Type= protein_coding chr12 10212805 10223130 10212805 10223130 + ENST00000266458.9@GABARAPL1 ENST00000266458.9 protein_coding 10212805,10218063,10220440,10221787 10213219,10218141,10220558,10223130 Gene ID= ENSG00000139112.10 TPM= 101.42 Transcript Type= protein_coding chr12 10604190 10613623 10604190 10613623 - ENST00000320756.6@MAGOHB ENST00000320756.6 protein_coding 10613439,10610622,10609831,10607854,10604190 10613623,10610680,10609941,10607936,10606374 Gene ID= ENSG00000111196.9 TPM= 11.77 Transcript Type= protein_coding chr12 10606013 10613594 10606013 10613594 - ENST00000544850.5@MAGOHB ENST00000544850.5 protein_coding 10613439,10610622,10609831,10609098,10607854,10606013 10613594,10610680,10609941,10609383,10607936,10606374 Gene ID= ENSG00000111196.9 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr12 10699089 10723307 10699089 10723307 - ENST00000279550.11@YBX3 ENST00000279550.11 protein_coding 10722850,10719080,10718088,10715694,10713211,10704051,10701960,10701254,10699089 10723307,10719143,10718121,10715783,10713333,10704148,10702134,10701353,10699654 Gene ID= ENSG00000060138.12 TPM= 100.7 Transcript Type= protein_coding chr12 10699213 10723312 10699213 10723312 - ENST00000228251.8@YBX3 ENST00000228251.8 protein_coding 10722850,10719080,10718088,10715694,10713211,10709908,10704051,10701960,10701254,10699213 10723312,10719143,10718121,10715783,10713333,10710114,10704148,10702134,10701353,10699654 Gene ID= ENSG00000060138.12 TPM= 3.8 Transcript Type= protein_coding chr12 10845849 11171613 10845849 11171613 - ENST00000535024.5@PRR4 ENST00000535024.5 protein_coding 11171422,11047020,10973655,10848372,10847045,10845849 11171613,11047188,10973721,10848407,10847367,10845950 Gene ID= ENSG00000111215.11 TPM= 1.81 Transcript Type= protein_coding chr12 10845851 11171620 10845851 11171620 - transcript745.chr12.nnic@AC018630.6 transcript745.chr12.nnic protein_coding 11171422,11047020,10973655,10883061,10882552,10882217,10848372,10847045,10845851 11171620,11047188,10973721,10883096,10882698,10882488,10848407,10847367,10845950 Gene ID= ENSG00000275778.1 TPM= 1.81 Transcript Type= NA chr12 10994930 11171584 10994930 11171584 - transcript761.chr12.nnic@AC018630.6 transcript761.chr12.nnic protein_coding 11171267,11047020,11034782,10994930 11171584,11047188,11034885,10996325 Gene ID= ENSG00000275778.1 TPM= 1.81 Transcript Type= NA chr12 10995968 11171620 10995968 11171620 - transcript762.chr12.nnic@AC018630.6 transcript762.chr12.nnic protein_coding 11171422,11047020,11034782,10995968 11171620,11047188,11034885,10996325 Gene ID= ENSG00000275778.1 TPM= 1.81 Transcript Type= NA chr12 10995968 11171620 10995968 11171620 - transcript764.chr12.nnic@AC018630.6 transcript764.chr12.nnic protein_coding 11171422,11047020,10995968 11171620,11047188,10996325 Gene ID= ENSG00000275778.1 TPM= 1.81 Transcript Type= NA chr12 10937408 11171573 10937408 11171573 - ENST00000381852.4@TAS2R14 ENST00000381852.4 protein_coding 11171422,11047020,11034782,10973655,10937408 11171573,11047188,11034885,10973721,10938577 Gene ID= ENSG00000212127.5 TPM= 1.81 Transcript Type= processed_transcript chr12 11649732 11893742 11649732 11893742 + transcript774.chr12.nnic@ETV6 transcript774.chr12.nnic protein_coding 11649732,11839140,11853427,11869424,11884445,11885926,11890941 11650160,11839304,11853561,11869969,11884587,11886026,11893742 Gene ID= ENSG00000139083.10 TPM= 1.81 Transcript Type= NA chr12 11649854 11895402 11649854 11895402 + ENST00000396373.8@ETV6 ENST00000396373.8 protein_coding 11649854,11752450,11839140,11853427,11869424,11884445,11885926,11890941 11650160,11752579,11839304,11853561,11869969,11884587,11886026,11895402 Gene ID= ENSG00000139083.10 TPM= 65.2 Transcript Type= protein_coding chr12 12326056 12350541 12326056 12350541 - ENST00000535902.5@MANSC1 ENST00000535902.5 protein_coding 12350078,12343092,12338420,12326056 12350541,12343414,12338560,12330958 Gene ID= ENSG00000111261.13 TPM= 15.39 Transcript Type= protein_coding chr12 12355406 12357067 12355406 12357067 - ENST00000381800.3@LOH12CR2 ENST00000381800.3 lincRNA 12356928,12355406 12357067,12356805 Gene ID= ENSG00000205791.3 TPM= 5.43 Transcript Type= lincRNA chr12 12474223 12561182 12474223 12561182 - transcript787.chr12.nic@DUSP16 transcript787.chr12.nic protein_coding 12561000,12554536,12520871,12519862,12500519,12487028,12480223,12474223 12561182,12554659,12521463,12520000,12500682,12487187,12480346,12478015 Gene ID= ENSG00000111266.8 TPM= 6.79 Transcript Type= NA chr12 12475897 12562567 12475897 12562567 - transcript788.chr12.nnic@DUSP16 transcript788.chr12.nnic protein_coding 12562117,12554536,12520871,12519862,12500519,12487028,12480223,12475897 12562567,12554659,12521463,12520000,12500682,12487187,12480346,12478015 Gene ID= ENSG00000111266.8 TPM= 4.98 Transcript Type= NA chr12 12474223 12561162 12474223 12561162 - transcript791.chr12.nic@DUSP16 transcript791.chr12.nic protein_coding 12561000,12520871,12519862,12500519,12487028,12480223,12474223 12561162,12521463,12520000,12500682,12487187,12480346,12478015 Gene ID= ENSG00000111266.8 TPM= 6.79 Transcript Type= NA chr12 12474210 12562383 12474210 12562383 - ENST00000298573.8@DUSP16 ENST00000298573.8 protein_coding 12562117,12520871,12519862,12500519,12487028,12480223,12474210 12562383,12521463,12520000,12500682,12487187,12480346,12478015 Gene ID= ENSG00000111266.8 TPM= 21.28 Transcript Type= protein_coding chr12 12611892 12645108 12611892 12645108 + ENST00000228865.2@CREBL2 ENST00000228865.2 protein_coding 12611892,12635777,12637570,12641994 12612187,12635974,12637714,12645108 Gene ID= ENSG00000111269.2 TPM= 373.99 Transcript Type= protein_coding chr12 12725931 12791466 12725931 12791466 + ENST00000326765.10@APOLD1 ENST00000326765.10 protein_coding 12725931,12786909 12726096,12791466 Gene ID= ENSG00000178878.12 TPM= 3.62 Transcript Type= protein_coding chr12 12785607 12791466 12785607 12791466 + ENST00000356591.4@APOLD1 ENST00000356591.4 protein_coding 12785607,12786909 12785694,12791466 Gene ID= ENSG00000178878.12 TPM= 13.58 Transcript Type= protein_coding chr12 12813360 12829980 12813360 12829980 + transcript806.chr12.nic@DDX47 transcript806.chr12.nic protein_coding 12813360,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423 12813516,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829980 Gene ID= ENSG00000213782.7 TPM= 2.26 Transcript Type= NA chr12 12813354 12829979 12813354 12829979 + ENST00000545038.5@DDX47 ENST00000545038.5 protein_coding 12813354,12814131,12821208,12821655,12821965,12822661,12823203,12824540,12826000,12827246,12829423 12813454,12814224,12821396,12821726,12822083,12822732,12824016,12824677,12826070,12827375,12829979 Gene ID= ENSG00000213782.7 TPM= 9.06 Transcript Type= retained_intron chr12 12813346 12829981 12813346 12829981 + ENST00000358007.7@DDX47 ENST00000358007.7 protein_coding 12813346,12814131,12821208,12821655,12821965,12822661,12823203,12823870,12824540,12826000,12827246,12829423 12813454,12814224,12821396,12821726,12822083,12822732,12823319,12824016,12824677,12826070,12827375,12829981 Gene ID= ENSG00000213782.7 TPM= 52.07 Transcript Type= protein_coding chr12 12890782 12917937 12890782 12917937 + ENST00000014914.5@GPRC5A ENST00000014914.5 protein_coding 12890782,12908243,12912084,12912447 12891664,12909171,12912142,12917937 Gene ID= ENSG00000013588.7 TPM= 9.96 Transcript Type= protein_coding chr12 12927710 12980561 12927710 12980561 + transcript812.chr12.nnic@GPRC5D-AS1 transcript812.chr12.nnic antisense_RNA 12927710,12966759,12979524,12980000 12927803,12966857,12979622,12980561 Gene ID= ENSG00000247498.9 TPM= 1.81 Transcript Type= NA chr12 12927758 12980562 12927758 12980562 + ENST00000543515.6@GPRC5D-AS1 ENST00000543515.6 antisense_RNA 12927758,12979524,12980000 12927803,12979622,12980562 Gene ID= ENSG00000247498.9 TPM= 2.72 Transcript Type= antisense_RNA chr12 12974864 13000273 12974864 13000273 - ENST00000014930.8@HEBP1 ENST00000014930.8 protein_coding 13000037,12989277,12987152,12974864 13000273,12989415,12987332,12975479 Gene ID= ENSG00000013583.8 TPM= 158.47 Transcript Type= protein_coding chr12 12985645 13000265 12985645 13000265 - ENST00000536942.1@HEBP1 ENST00000536942.1 protein_coding 13000037,12989277,12985645 13000265,12989415,12987332 Gene ID= ENSG00000013583.8 TPM= 3.62 Transcript Type= protein_coding chr12 14365632 14502935 14365632 14502935 + ENST00000261168.8@ATF7IP ENST00000261168.8 protein_coding 14365632,14423909,14434337,14436106,14438130,14446988,14456561,14457207,14460495,14466526,14475890,14478317,14481003,14496231,14497654 14365827,14425473,14434423,14436251,14438267,14447053,14456634,14457295,14461133,14466590,14475968,14478472,14481185,14496343,14502935 Gene ID= ENSG00000171681.12 TPM= 3.17 Transcript Type= protein_coding chr12 14385064 14498763 14385064 14498763 + ENST00000544627.5@ATF7IP ENST00000544627.5 protein_coding 14385064,14423909,14434337,14436106,14438130,14446988,14456561,14457207,14460495,14466526,14475890,14478317,14481003,14496231,14497654 14385400,14425473,14434423,14436251,14438267,14447053,14456634,14457295,14461133,14466590,14475968,14478472,14481185,14496343,14498763 Gene ID= ENSG00000171681.12 TPM= 2.26 Transcript Type= protein_coding chr12 14503661 14568349 14503661 14568349 - ENST00000240617.9@PLBD1 ENST00000240617.9 protein_coding 14567582,14553193,14542208,14540764,14536570,14535659,14511511,14511260,14506933,14506162,14503661 14568349,14553412,14542291,14540902,14536710,14535803,14511711,14511400,14507118,14506268,14503954 Gene ID= ENSG00000121316.10 TPM= 9.06 Transcript Type= protein_coding chr12 14784579 14803540 14784579 14803540 - ENST00000261167.6@WBP11 ENST00000261167.6 protein_coding 14803352,14801320,14800752,14799635,14796807,14794971,14794537,14793731,14791169,14790456,14788951,14784579 14803540,14801428,14800783,14799728,14797003,14795104,14794736,14793922,14791270,14790749,14789133,14787498 Gene ID= ENSG00000084463.7 TPM= 90.55 Transcript Type= protein_coding chr12 14881181 14885926 14881181 14885926 - ENST00000539261.5@MGP ENST00000539261.5 protein_coding 14885731,14884213,14882972,14881181 14885926,14884245,14883047,14882280 Gene ID= ENSG00000111341.9 TPM= 696.36 Transcript Type= protein_coding chr12 14942017 14961669 14942017 14961669 - ENST00000228945.8@ARHGDIB ENST00000228945.8 protein_coding 14961537,14950532,14949802,14947873,14944776,14942017 14961669,14950724,14949885,14947949,14944839,14942721 Gene ID= ENSG00000111348.8 TPM= 77.88 Transcript Type= protein_coding chr12 15107782 15221460 15107782 15221460 - transcript847.chr12.nnic@RERG transcript847.chr12.nnic protein_coding 15221195,15217429,15121063,15119115,15111344,15107782 15221460,15217603,15121119,15119261,15111417,15109517 Gene ID= ENSG00000134533.6 TPM= 4.35 Transcript Type= NA chr12 15107782 15221413 15107782 15221413 - transcript853.chr12.nnic@RERG transcript853.chr12.nnic protein_coding 15221195,15217429,15121063,15111344,15107782 15221413,15217603,15121119,15111417,15109549 Gene ID= ENSG00000134533.6 TPM= 5.25 Transcript Type= NA chr12 15107784 15221424 15107784 15221424 - transcript854.chr12.nnic@RERG transcript854.chr12.nnic protein_coding 15221195,15217429,15121063,15111344,15107784 15221424,15217603,15121119,15111417,15110282 Gene ID= ENSG00000134533.6 TPM= 3.44 Transcript Type= NA chr12 15107783 15221417 15107783 15221417 - ENST00000256953.6@RERG ENST00000256953.6 protein_coding 15221195,15217429,15121063,15111344,15107783 15221417,15217603,15121119,15111417,15109517 Gene ID= ENSG00000134533.6 TPM= 83.13 Transcript Type= protein_coding chr12 15546352 15597399 15546352 15597399 + ENST00000542557.5@PTPRO ENST00000542557.5 protein_coding 15546352,15549094,15551551,15557455,15565593,15569417,15578853,15580039,15580697,15581679,15586897,15589455,15594937,15596090 15546708,15549226,15551671,15557523,15565628,15569498,15578943,15580115,15580831,15581801,15587051,15589590,15595057,15597399 Gene ID= ENSG00000151490.13 TPM= 5.43 Transcript Type= protein_coding chr12 15620139 15789386 15620139 15789386 - transcript864.chr12.nnic@EPS8 transcript864.chr12.nnic protein_coding 15789161,15713266,15682893,15681226,15670856,15669664,15669387,15666440,15665756,15662026,15660614,15658497,15658079,15654145,15650823,15647127,15641722,15640703,15631442,15624227,15623158,15620139 15789386,15713325,15682972,15681302,15670923,15669825,15669536,15666522,15665892,15662099,15660740,15658585,15658153,15654293,15651006,15647260,15641830,15640846,15631664,15624407,15623287,15621430 Gene ID= ENSG00000151491.12 TPM= 4.98 Transcript Type= NA chr12 15620162 15789576 15620162 15789576 - ENST00000281172.9@EPS8 ENST00000281172.9 protein_coding 15789161,15682893,15681226,15670856,15669664,15669387,15666440,15665756,15662026,15660614,15658497,15658079,15654145,15650823,15647127,15641722,15640703,15631442,15624227,15623158,15620162 15789576,15682972,15681302,15670923,15669825,15669536,15666522,15665892,15662099,15660740,15658585,15658153,15654293,15651006,15647260,15641830,15640846,15631664,15624407,15623287,15621430 Gene ID= ENSG00000151491.12 TPM= 41.2 Transcript Type= protein_coding chr12 15882395 15903478 15882395 15903478 + ENST00000419869.6@STRAP ENST00000419869.6 protein_coding 15882395,15883541,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917 15882819,15883676,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903478 Gene ID= ENSG00000023734.10 TPM= 254.46 Transcript Type= protein_coding chr12 15882391 15903442 15882391 15903442 + ENST00000541731.1@STRAP ENST00000541731.1 protein_coding 15882391,15889928,15890597,15894047,15895359,15897882,15899904,15900947,15902917 15882819,15890009,15890669,15894143,15895496,15898018,15900053,15901012,15903442 Gene ID= ENSG00000023734.10 TPM= 34.41 Transcript Type= nonsense_mediated_decay chr12 16347551 16364409 16347551 16364409 + transcript891.chr12.nic@MGST1 transcript891.chr12.nic protein_coding 16347551,16354231,16363795 16347710,16354378,16364409 Gene ID= ENSG00000008394.12 TPM= 43.24 Transcript Type= NA chr12 16347649 16364403 16347649 16364403 + ENST00000396210.7@MGST1 ENST00000396210.7 protein_coding 16347649,16354231,16357605,16363795 16347710,16354378,16357699,16364403 Gene ID= ENSG00000008394.12 TPM= 1255.16 Transcript Type= protein_coding chr12 19322484 19376405 19322484 19376405 + transcript906.chr12.nic@PLEKHA5 transcript906.chr12.nic protein_coding 19322484,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531 19322667,19336616,19343434,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376405 Gene ID= ENSG00000052126.14 TPM= 5.89 Transcript Type= NA chr12 19129752 19202003 19129752 19202003 + ENST00000540972.5@PLEKHA5 ENST00000540972.5 protein_coding 19129752,19130051,19132393,19200325 19129888,19130130,19132450,19202003 Gene ID= ENSG00000052126.14 TPM= 2.72 Transcript Type= protein_coding chr12 19129794 19376400 19129794 19376400 + ENST00000299275.10@PLEKHA5 ENST00000299275.10 protein_coding 19129794,19130051,19132393,19253940,19255045,19257433,19260949,19265750,19269770,19274516,19283280,19287473,19320562,19322310,19322518,19336515,19343323,19345842,19348399,19353884,19358228,19359412,19361582,19365964,19369693,19375531 19129888,19130130,19132450,19254023,19255165,19257537,19261021,19265850,19269885,19274983,19283745,19287556,19320624,19322390,19322667,19336616,19343434,19345888,19348519,19354002,19358437,19359546,19361706,19366109,19369798,19376400 Gene ID= ENSG00000052126.14 TPM= 94.63 Transcript Type= protein_coding chr12 19439912 19520763 19439912 19520763 + transcript913.chr12.nnic@AEBP2 transcript913.chr12.nnic protein_coding 19439912,19462510,19466748,19473248,19493800,19500097,19512398,19514671,19518087 19440370,19462717,19466850,19473355,19493986,19500221,19512465,19514784,19520763 Gene ID= ENSG00000139154.14 TPM= 6.52 Transcript Type= NA chr12 19439638 19554402 19439638 19554402 + transcript915.chr12.nic@AEBP2 transcript915.chr12.nic protein_coding 19439638,19462510,19473248,19493800,19500097,19512398,19514671,19518087,19552853 19440370,19462717,19473355,19493986,19500221,19512465,19514784,19518113,19554402 Gene ID= ENSG00000139154.14 TPM= 5.43 Transcript Type= NA chr12 19439669 19521632 19439669 19521632 + transcript918.chr12.nnic@AEBP2 transcript918.chr12.nnic protein_coding 19439669,19462510,19473248,19493800,19500097,19512398,19518087,19518675 19440370,19462717,19473355,19493986,19500221,19512465,19518113,19521632 Gene ID= ENSG00000139154.14 TPM= 5.61 Transcript Type= NA chr12 19439671 19520231 19439671 19520231 + transcript920.chr12.nnic@AEBP2 transcript920.chr12.nnic protein_coding 19439671,19473248,19493800,19500097,19512398,19514671,19518087,19518675 19440370,19473355,19493986,19500221,19512465,19514784,19518113,19520231 Gene ID= ENSG00000139154.14 TPM= 1.99 Transcript Type= NA chr12 19439674 19522239 19439674 19522239 + ENST00000398864.7@AEBP2 ENST00000398864.7 protein_coding 19439674,19462510,19473248,19493800,19500097,19512398,19514671,19518087,19518675 19440370,19462717,19473355,19493986,19500221,19512465,19514784,19518113,19522239 Gene ID= ENSG00000139154.14 TPM= 18.29 Transcript Type= protein_coding chr12 19439699 19520224 19439699 19520224 + ENST00000266508.13@AEBP2 ENST00000266508.13 protein_coding 19439699,19462510,19473248,19493800,19500097,19512398,19514671,19518087 19440370,19462717,19473355,19493986,19500221,19512465,19514784,19520224 Gene ID= ENSG00000139154.14 TPM= 16.48 Transcript Type= protein_coding chr12 21437624 21457501 21437624 21457501 + transcript933.chr12.nic@PYROXD1 transcript933.chr12.nic protein_coding 21437624,21440368,21445347,21449563,21452081,21455132,21455995,21456865 21437814,21440448,21445466,21449691,21452154,21455292,21456095,21457501 Gene ID= ENSG00000121350.15 TPM= 1.81 Transcript Type= NA chr12 21437677 21471252 21437677 21471252 + ENST00000240651.13@PYROXD1 ENST00000240651.13 protein_coding 21437677,21440368,21445347,21449563,21452081,21455132,21455995,21461025,21462008,21462740,21467481,21468506 21437814,21440448,21445466,21449691,21452154,21455292,21456095,21461154,21462120,21462862,21467618,21471252 Gene ID= ENSG00000121350.15 TPM= 37.31 Transcript Type= protein_coding chr12 21468911 21501641 21468911 21501641 - transcript924.chr12.nic@RECQL transcript924.chr12.nic protein_coding 21501463,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911 21501641,21501215,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346 Gene ID= ENSG00000004700.15 TPM= 6.52 Transcript Type= NA chr12 21468909 21501655 21468909 21501655 - transcript926.chr12.nic@RECQL transcript926.chr12.nic protein_coding 21501463,21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468909 21501655,21501372,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346 Gene ID= ENSG00000004700.15 TPM= 9.24 Transcript Type= NA chr12 21468911 21501593 21468911 21501593 - ENST00000444129.6@RECQL ENST00000444129.6 protein_coding 21501170,21499555,21491519,21490199,21486479,21483376,21477803,21476911,21475676,21475468,21474841,21473551,21471428,21470969,21468911 21501593,21499615,21491716,21490378,21486585,21483574,21477969,21476992,21475824,21475585,21474979,21473642,21471647,21471098,21470346 Gene ID= ENSG00000004700.15 TPM= 29.16 Transcript Type= protein_coding chr12 21501788 21518157 21501788 21518157 + transcript937.chr12.nic@GOLT1B transcript937.chr12.nic protein_coding 21501788,21506885,21512295,21515669 21501948,21508561,21512376,21518157 Gene ID= ENSG00000111711.9 TPM= 1.81 Transcript Type= NA chr12 21501815 21518408 21501815 21518408 + ENST00000229314.9@GOLT1B ENST00000229314.9 protein_coding 21501815,21506885,21508383,21512295,21515669 21501948,21506976,21508561,21512376,21518408 Gene ID= ENSG00000111711.9 TPM= 59.77 Transcript Type= protein_coding chr12 21635342 21657842 21635342 21657842 - ENST00000350669.5@LDHB ENST00000350669.5 protein_coding 21657751,21654543,21646899,21643935,21641952,21638353,21637071,21635342 21657842,21654677,21647016,21644108,21642125,21638470,21637194,21635709 Gene ID= ENSG00000111716.12 TPM= 462.73 Transcript Type= protein_coding chr12 21764950 21775666 21764950 21775666 - transcript945.chr12.nnic@KCNJ8 transcript945.chr12.nnic protein_coding 21775487,21774546,21773243,21764950 21775666,21774683,21773686,21766623 Gene ID= ENSG00000121361.3 TPM= 11.77 Transcript Type= NA chr12 21764955 21774821 21764955 21774821 - ENST00000240662.2@KCNJ8 ENST00000240662.2 protein_coding 21774546,21773243,21764955 21774821,21773686,21766623 Gene ID= ENSG00000121361.3 TPM= 57.05 Transcript Type= protein_coding chr12 22046174 22065663 22046174 22065663 + ENST00000229329.6@CMAS ENST00000229329.6 protein_coding 22046174,22055149,22055455,22058567,22060832,22061281,22062281,22065121 22046563,22055291,22055610,22058700,22060926,22061452,22062434,22065663 Gene ID= ENSG00000111726.12 TPM= 197.41 Transcript Type= protein_coding chr12 22046225 22065674 22046225 22065674 + ENST00000534981.5@CMAS ENST00000534981.5 protein_coding 22046225,22055149,22055455,22058567,22060832,22062281,22065121 22046563,22055291,22055610,22058700,22060926,22062434,22065674 Gene ID= ENSG00000111726.12 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr12 22193391 22334714 22193391 22334714 - ENST00000396037.8@ST8SIA1 ENST00000396037.8 protein_coding 22333997,22287149,22255280,22249006,22193391 22334714,22287293,22255389,22249098,22202038 Gene ID= ENSG00000111728.10 TPM= 3.62 Transcript Type= protein_coding chr12 22448577 22544541 22448577 22544541 - transcript961.chr12.nnic@C2CD5 transcript961.chr12.nnic protein_coding 22544362,22544061,22535258,22527721,22525610,22524472,22523426,22517986,22513294,22506711,22493223,22490123,22484697,22482557,22478313,22474751,22472744,22472286,22471967,22471399,22470824,22469709,22456971,22453896,22448577 22544541,22544179,22535344,22527892,22525705,22524627,22523624,22518137,22513379,22506819,22493337,22490218,22484888,22482743,22478477,22474891,22472807,22472347,22472065,22471488,22470911,22469795,22457161,22454042,22449891 Gene ID= ENSG00000111731.12 TPM= 2.72 Transcript Type= NA chr12 22448577 22544196 22448577 22544196 - transcript962.chr12.nic@C2CD5 transcript962.chr12.nic protein_coding 22544061,22535258,22527721,22525610,22524472,22523426,22517986,22513294,22506711,22493223,22490123,22484697,22482557,22478313,22474751,22472744,22472286,22471967,22471399,22470824,22469709,22456971,22453896,22448577 22544196,22535344,22527892,22525705,22524627,22523624,22518137,22513379,22506819,22493337,22490218,22484888,22482743,22478477,22474891,22472807,22472347,22472065,22471488,22470911,22469795,22457161,22454042,22449891 Gene ID= ENSG00000111731.12 TPM= 3.62 Transcript Type= NA chr12 22448583 22544546 22448583 22544546 - ENST00000333957.8@C2CD5 ENST00000333957.8 protein_coding 22544320,22544061,22535258,22527721,22525610,22524472,22523426,22517986,22513294,22506711,22493223,22490123,22484697,22482557,22478313,22474751,22472744,22472286,22471967,22471399,22470824,22469709,22456971,22453896,22448583 22544546,22544179,22535344,22527892,22525705,22524627,22523624,22518137,22513379,22506819,22493337,22490218,22484888,22482743,22478477,22474891,22472807,22472347,22472065,22471488,22470911,22469795,22457161,22454042,22449891 Gene ID= ENSG00000111731.12 TPM= 15.39 Transcript Type= protein_coding chr12 22625075 22690665 22625075 22690665 + ENST00000266517.8@ETNK1 ENST00000266517.8 protein_coding 22625075,22643763,22659014,22661063,22671272,22673500,22684483,22684882 22625586,22644022,22659154,22661205,22671355,22673660,22684556,22690665 Gene ID= ENSG00000139163.15 TPM= 13.58 Transcript Type= protein_coding chr12 24810022 24949459 24810022 24949459 - ENST00000261192.11@BCAT1 ENST00000261192.11 protein_coding 24948927,24901814,24894275,24881301,24878530,24849786,24842082,24836511,24832723,24829823,24810022 24949459,24901885,24894475,24881411,24878649,24849949,24842224,24836596,24832863,24829897,24818049 Gene ID= ENSG00000060982.14 TPM= 1.81 Transcript Type= protein_coding chr12 25195265 25205015 25195265 25205015 + ENST00000556885.5@ETFRF1 ENST00000556885.5 protein_coding 25195265,25203920,25204091 25195337,25204007,25205015 Gene ID= ENSG00000205707.10 TPM= 28.98 Transcript Type= protein_coding chr12 25204789 25250931 25204789 25250931 - ENST00000311936.7@KRAS ENST00000311936.7 protein_coding 25250751,25245274,25227234,25225614,25204789 25250931,25245395,25227412,25225773,25209911 Gene ID= ENSG00000133703.11 TPM= 9.96 Transcript Type= protein_coding chr12 25958691 26072868 25958691 26072868 + transcript987.chr12.nic@RASSF8 transcript987.chr12.nic protein_coding 25958691,25995037,26055236,26064498,26067569,26068697 25959148,25995130,26055446,26065387,26067713,26072868 Gene ID= ENSG00000123094.15 TPM= 5.43 Transcript Type= NA chr12 25958506 26072868 25958506 26072868 + transcript988.chr12.nic@RASSF8 transcript988.chr12.nic protein_coding 25958506,25995037,26055279,26064498,26067569,26068697 25959148,25995130,26055446,26065387,26067713,26072868 Gene ID= ENSG00000123094.15 TPM= 5.43 Transcript Type= NA chr12 25958685 26072868 25958685 26072868 + transcript991.chr12.nic@RASSF8 transcript991.chr12.nic protein_coding 25958685,26055279,26064498,26067569,26068697 25959148,26055446,26065387,26067713,26072868 Gene ID= ENSG00000123094.15 TPM= 4.53 Transcript Type= NA chr12 26120416 26124938 26120416 26124938 - transcript997.chr12.nic@BHLHE41 transcript997.chr12.nic protein_coding 26124718,26124519,26123630,26120416 26124938,26124582,26124179,26123168 Gene ID= ENSG00000123095.5 TPM= 1.81 Transcript Type= NA chr12 26120026 26125127 26120026 26125127 - ENST00000242728.4@BHLHE41 ENST00000242728.4 protein_coding 26124718,26124519,26124072,26123630,26120026 26125127,26124582,26124179,26123741,26123168 Gene ID= ENSG00000123095.5 TPM= 25.36 Transcript Type= protein_coding chr12 26195340 26234779 26195340 26234779 + ENST00000422622.3@SSPN ENST00000422622.3 protein_coding 26195340,26224293,26230711 26195531,26224379,26234779 Gene ID= ENSG00000123096.11 TPM= 5.43 Transcript Type= protein_coding chr12 26195496 26232955 26195496 26232955 + ENST00000242729.6@SSPN ENST00000242729.6 protein_coding 26195496,26224293,26230711 26195951,26224379,26232955 Gene ID= ENSG00000123096.11 TPM= 9.96 Transcript Type= protein_coding chr12 26336515 26833198 26336515 26833198 - ENST00000381340.7@ITPR2 ENST00000381340.7 protein_coding 26832690,26790157,26725650,26724656,26722397,26716144,26715752,26715299,26711173,26695606,26686481,26682574,26681874,26665910,26663685,26659113,26658011,26657707,26656297,26655708,26653976,26631866,26628033,26624299,26622240,26621123,26602617,26602370,26599987,26599145,26596883,26595465,26580027,26578713,26561762,26556233,26550247,26495152,26494153,26487068,26486104,26483698,26481131,26476912,26475296,26443543,26439127,26436221,26427913,26419049,26415303,26411320,26400128,26398876,26387434,26340167,26336515 26833198,26790227,26725765,26724742,26722555,26716242,26715835,26715445,26711268,26695650,26686632,26682673,26682034,26666051,26663846,26659285,26658130,26657892,26656548,26655852,26654126,26632059,26628162,26624356,26622405,26621296,26602706,26602495,26600109,26599345,26597134,26595590,26580155,26578833,26561952,26556375,26550355,26495260,26494340,26487251,26486360,26483898,26481241,26477007,26475418,26443650,26439319,26436346,26428088,26419213,26415498,26411412,26400258,26399041,26387594,26340328,26339483 Gene ID= ENSG00000123104.11 TPM= 4.53 Transcript Type= protein_coding chr12 26905186 26938308 26905186 26938308 - transcript1006.chr12.nic@INTS13 transcript1006.chr12.nic protein_coding 26938268,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26914408,26913974,26913457,26911178,26906302,26905186 26938308,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914578,26914128,26913687,26911317,26906437,26905536 Gene ID= ENSG00000064102.14 TPM= 1.99 Transcript Type= NA chr12 26905026 26937980 26905026 26937980 - transcript1007.chr12.nic@INTS13 transcript1007.chr12.nic protein_coding 26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26914408,26913974,26913457,26911178,26906302,26905026 26937980,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26914532,26914128,26913687,26911317,26906437,26905536 Gene ID= ENSG00000064102.14 TPM= 1.99 Transcript Type= NA chr12 26905182 26938376 26905182 26938376 - transcript1008.chr12.nic@INTS13 transcript1008.chr12.nic protein_coding 26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917352,26916002,26914408,26913974,26913457,26911178,26906302,26905182 26938376,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917441,26916180,26914578,26914128,26913687,26911317,26906437,26905536 Gene ID= ENSG00000064102.14 TPM= 2.9 Transcript Type= NA chr12 26905185 26937933 26905185 26937933 - transcript1009.chr12.nic@INTS13 transcript1009.chr12.nic protein_coding 26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26913974,26913457,26911178,26906302,26905185 26937933,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914128,26913687,26911317,26906437,26905536 Gene ID= ENSG00000064102.14 TPM= 2.9 Transcript Type= NA chr12 26905181 26938321 26905181 26938321 - ENST00000261191.11@INTS13 ENST00000261191.11 protein_coding 26937796,26936579,26934556,26928703,26928205,26925761,26924355,26922616,26917644,26917352,26916002,26914408,26913974,26913457,26911178,26906302,26905181 26938321,26936814,26934630,26928905,26928285,26925851,26924483,26922700,26917733,26917441,26916180,26914578,26914128,26913687,26911317,26906437,26905536 Gene ID= ENSG00000064102.14 TPM= 47.27 Transcript Type= protein_coding chr12 26938500 26966650 26938500 26966650 + ENST00000327214.5@FGFR1OP2 ENST00000327214.5 protein_coding 26938500,26954145,26956543,26957601,26963342,26964596 26938710,26954293,26956660,26957743,26963455,26966650 Gene ID= ENSG00000111790.13 TPM= 36.67 Transcript Type= protein_coding chr12 26938484 26957971 26938484 26957971 + ENST00000395941.4@FGFR1OP2 ENST00000395941.4 protein_coding 26938484,26954145,26956543,26957601 26938710,26954293,26956660,26957971 Gene ID= ENSG00000111790.13 TPM= 2.26 Transcript Type= retained_intron chr12 26971586 27014406 26971586 27014406 - transcript1028.chr12.nic@TM7SF3 transcript1028.chr12.nic protein_coding 27014078,27003236,26999526,26996742,26995237,26990450,26980566,26979784,26976260,26975496,26971586 27014406,27003390,26999676,26996862,26995408,26990627,26980646,26979936,26976357,26975658,26974227 Gene ID= ENSG00000064115.10 TPM= 4.83 Transcript Type= NA chr12 26971586 27014486 26971586 27014486 - transcript1030.chr12.nic@TM7SF3 transcript1030.chr12.nic protein_coding 27014078,27003236,26999526,26996742,26995237,26990450,26982773,26980566,26976260,26975496,26971586 27014486,27003390,26999676,26996862,26995408,26990627,26982859,26980646,26976357,26975658,26974227 Gene ID= ENSG00000064115.10 TPM= 18.41 Transcript Type= NA chr12 26973195 27014394 26973195 27014394 - ENST00000343028.8@TM7SF3 ENST00000343028.8 protein_coding 27014078,27003236,26999526,26996742,26995237,26990450,26982773,26980566,26979784,26976260,26975496,26973195 27014394,27003390,26999676,26996862,26995408,26990627,26982859,26980646,26979936,26976357,26975658,26974227 Gene ID= ENSG00000064115.10 TPM= 139.45 Transcript Type= protein_coding chr12 27022550 27029749 27022550 27029749 + ENST00000282892.3@MED21 ENST00000282892.3 protein_coding 27022550,27026420,27027347,27028285 27022621,27026534,27027447,27029749 Gene ID= ENSG00000152944.8 TPM= 61.58 Transcript Type= protein_coding chr12 27244175 27325959 27244175 27325959 + ENST00000389032.7@STK38L ENST00000389032.7 protein_coding 27244175,27297710,27302137,27308339,27309114,27312549,27314504,27315015,27315289,27317336,27317896,27319328,27322143,27322328 27244332,27297854,27302188,27308461,27309197,27312672,27314658,27315117,27315350,27317453,27318019,27319423,27322234,27325959 Gene ID= ENSG00000211455.7 TPM= 31.69 Transcript Type= protein_coding chr12 27524131 27695563 27524131 27695563 + transcript1053.chr12.nic@PPFIBP1 transcript1053.chr12.nic protein_coding 27524131,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27656616,27658816,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796 27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27656730,27658848,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695563 Gene ID= ENSG00000110841.13 TPM= 2.26 Transcript Type= NA chr12 27524131 27695563 27524131 27695563 + transcript1055.chr12.nic@PPFIBP1 transcript1055.chr12.nic protein_coding 27524131,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27677064,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796 27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27656730,27660945,27664437,27667320,27671546,27672483,27673827,27674221,27676599,27677096,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695563 Gene ID= ENSG00000110841.13 TPM= 5.89 Transcript Type= NA chr12 27524131 27695563 27524131 27695563 + transcript1059.chr12.nic@PPFIBP1 transcript1059.chr12.nic protein_coding 27524131,27578152,27633362,27634910,27646062,27647729,27650010,27654722,27656616,27660884,27664362,27667166,27671431,27672427,27673767,27674192,27676428,27679489,27679933,27681546,27682387,27682615,27687385,27688298,27689015,27691749,27692591,27692796 27524365,27578239,27633460,27635115,27646148,27647842,27650141,27654814,27656730,27660945,27664446,27667320,27671546,27672483,27673827,27674221,27676599,27679639,27680061,27681696,27682498,27682703,27687507,27688423,27689203,27691928,27692656,27695563 Gene ID= ENSG00000110841.13 TPM= 2.26 Transcript Type= NA chr12 27524158 27637319 27524158 27637319 + ENST00000545334.5@PPFIBP1 ENST00000545334.5 protein_coding 27524158,27578152,27633362,27634910 27524365,27578239,27633460,27637319 Gene ID= ENSG00000110841.13 TPM= 1.81 Transcript Type= protein_coding chr12 27710773 27756295 27710773 27756295 + ENST00000081029.7@MRPS35 ENST00000081029.7 protein_coding 27710773,27714780,27716291,27719808,27724047,27735447,27737539,27755181 27710955,27714820,27716458,27719868,27724186,27735556,27737608,27756295 Gene ID= ENSG00000061794.12 TPM= 172.96 Transcript Type= protein_coding chr12 27710835 27756294 27710835 27756294 + ENST00000538315.5@MRPS35 ENST00000538315.5 protein_coding 27710835,27714780,27716291,27719808,27724047,27737539,27755181 27710955,27714820,27716458,27719868,27724186,27737608,27756294 Gene ID= ENSG00000061794.12 TPM= 5.43 Transcript Type= protein_coding chr12 27780020 27803040 27780020 27803040 + ENST00000381271.6@KLHL42 ENST00000381271.6 protein_coding 27780020,27791708,27797715 27781202,27791901,27803040 Gene ID= ENSG00000087448.9 TPM= 18.11 Transcript Type= protein_coding chr12 28190443 28550165 28190443 28550165 + transcript1074.chr12.nnic@CCDC91 transcript1074.chr12.nnic protein_coding 28190443,28225795,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063 28190641,28225861,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165 Gene ID= ENSG00000123106.10 TPM= 4.53 Transcript Type= NA chr12 28190457 28550165 28190457 28550165 + transcript1076.chr12.nnic@CCDC91 transcript1076.chr12.nnic protein_coding 28190457,28255581,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063 28190641,28255662,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165 Gene ID= ENSG00000123106.10 TPM= 1.81 Transcript Type= NA chr12 28190426 28550165 28190426 28550165 + transcript1078.chr12.nic@CCDC91 transcript1078.chr12.nic protein_coding 28190426,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28549063 28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28550165 Gene ID= ENSG00000123106.10 TPM= 19.24 Transcript Type= NA chr12 28190426 28580279 28190426 28580279 + transcript1079.chr12.nnic@CCDC91 transcript1079.chr12.nnic protein_coding 28190426,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478,28484052,28579852 28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452654,28484165,28580279 Gene ID= ENSG00000123106.10 TPM= 2.04 Transcript Type= NA chr12 28190427 28550166 28190427 28550166 + ENST00000539107.5@CCDC91 ENST00000539107.5 protein_coding 28190427,28257202,28259364,28305649,28306742,28307645,28362438,28450161,28450350,28452478,28484052,28549063 28190641,28257245,28259442,28305806,28306945,28307749,28362515,28450253,28450418,28452654,28484165,28550166 Gene ID= ENSG00000123106.10 TPM= 1.13 Transcript Type= protein_coding chr12 28190438 28452636 28190438 28452636 + ENST00000536442.5@CCDC91 ENST00000536442.5 protein_coding 28190438,28257202,28259364,28305649,28306742,28307645,28362438,28391304,28450161,28450350,28452478 28190641,28257245,28259442,28305806,28306945,28307749,28362515,28391411,28450253,28450418,28452636 Gene ID= ENSG00000123106.10 TPM= 2.94 Transcript Type= non_stop_decay chr12 29337352 29381153 29337352 29381153 - ENST00000360150.8@ERGIC2 ENST00000360150.8 protein_coding 29381115,29371528,29370114,29368241,29366877,29361645,29357623,29356382,29350013,29349079,29345443,29343120,29341734,29337352 29381153,29371670,29370222,29368287,29366947,29361685,29357724,29356477,29350068,29349177,29345540,29343282,29341816,29341218 Gene ID= ENSG00000087502.17 TPM= 45.28 Transcript Type= protein_coding chr12 29603857 29783943 29603857 29783943 - transcript1096.chr12.nic@TMTC1 transcript1096.chr12.nic protein_coding 29783450,29767898,29758704,29755709,29751666,29660804,29659880,29633147,29603857 29783943,29768075,29758777,29755885,29751872,29660885,29659983,29633336,29604299 Gene ID= ENSG00000133687.15 TPM= 1.81 Transcript Type= NA chr12 30709553 30754867 30709553 30754867 - transcript1109.chr12.nic@CAPRIN2 transcript1109.chr12.nic protein_coding 30754681,30753344,30751071,30741020,30734968,30731343,30730239,30728648,30725966,30724370,30723259,30719079,30716508,30714959,30713785,30711566,30709553 30754867,30753559,30751133,30741106,30735206,30731510,30730282,30729325,30726088,30724451,30723314,30719225,30716676,30715141,30713885,30711629,30710470 Gene ID= ENSG00000110888.17 TPM= 2.72 Transcript Type= NA chr12 30795672 30803297 30795672 30803297 + transcript1120.chr12.nic@LINC00941 transcript1120.chr12.nic lincRNA 30795672,30799913,30800534,30801701 30796216,30800021,30800601,30803297 Gene ID= ENSG00000235884.3 TPM= 3.62 Transcript Type= NA chr12 31074199 31104798 31074199 31104798 + transcript1123.chr12.nnic@DDX11 transcript1123.chr12.nnic protein_coding 31074199,31078390,31083813,31084583,31084969,31087938,31089044,31089403,31089886,31091719,31092846,31093245,31094590,31094755,31096341,31096637,31096859,31097885,31100635,31101027,31101833,31102243,31102427,31102936,31103317,31103577,31103807 31074548,31078537,31084061,31084669,31085126,31087983,31089151,31089490,31090094,31091871,31092892,31093324,31094634,31094822,31096379,31096745,31096990,31097997,31100707,31101130,31101982,31102311,31102527,31103020,31103395,31103731,31104798 Gene ID= ENSG00000013573.16 TPM= 5.43 Transcript Type= NA chr12 31280560 31324179 31280560 31324179 - transcript1129.chr12.nnic@FAM60A transcript1129.chr12.nnic protein_coding 31323944,31304986,31298077,31295234,31293805,31287634,31280560 31324179,31305123,31298224,31295333,31293931,31287784,31282871 Gene ID= ENSG00000139146.13 TPM= 3.62 Transcript Type= NA chr12 31280560 31326191 31280560 31326191 - transcript1130.chr12.nnic@FAM60A transcript1130.chr12.nnic protein_coding 31326024,31304986,31298077,31295234,31293805,31287634,31280560 31326191,31305123,31298224,31295333,31293931,31287784,31282871 Gene ID= ENSG00000139146.13 TPM= 2.72 Transcript Type= NA chr12 31451342 31591139 31451342 31591139 - transcript1144.chr12.nic@DENND5B transcript1144.chr12.nic protein_coding 31590706,31499606,31495810,31479589,31460194,31451342 31591139,31499671,31495919,31480255,31460381,31452476 Gene ID= ENSG00000170456.15 TPM= 1.81 Transcript Type= NA chr12 31382223 31591097 31382223 31591097 - ENST00000389082.9@DENND5B ENST00000389082.9 protein_coding 31590706,31495810,31479589,31460194,31451940,31447538,31442775,31433155,31426293,31424535,31423597,31415367,31413436,31409263,31402498,31399654,31398175,31392614,31392267,31389324,31382223 31591097,31495919,31480255,31460381,31452476,31447769,31442925,31433248,31426424,31424687,31423675,31415448,31413564,31409384,31402643,31399772,31398362,31392696,31392393,31389498,31387786 Gene ID= ENSG00000170456.15 TPM= 2.72 Transcript Type= protein_coding chr12 31659688 31673114 31659688 31673114 + ENST00000357721.3@ETFBKMT ENST00000357721.3 protein_coding 31659688,31661841,31666087,31667647 31659789,31662267,31666217,31673114 Gene ID= ENSG00000139160.13 TPM= 3.62 Transcript Type= protein_coding chr12 31659187 31668967 31659187 31668967 + ENST00000395763.7@ETFBKMT ENST00000395763.7 protein_coding 31659187,31661841,31666087,31667647 31659362,31662267,31666217,31668967 Gene ID= ENSG00000139160.13 TPM= 2.72 Transcript Type= protein_coding chr12 31671137 31729174 31671137 31729174 - ENST00000281471.10@AMN1 ENST00000281471.10 protein_coding 31728971,31709293,31701863,31697740,31697361,31689007,31671137 31729174,31709425,31702007,31697957,31697417,31689118,31672377 Gene ID= ENSG00000151743.10 TPM= 8.15 Transcript Type= protein_coding chr12 31959419 31993107 31959419 31993107 + ENST00000312561.8@KIAA1551 ENST00000312561.8 protein_coding 31959419,31960777,31970189,31980878,31987239,31992378 31959491,31960871,31970356,31985957,31987322,31993107 Gene ID= ENSG00000174718.11 TPM= 4.53 Transcript Type= protein_coding chr12 32106817 32340720 32106817 32340720 + transcript1157.chr12.nic@BICD1 transcript1157.chr12.nic protein_coding 32106817,32216247,32293994,32305697,32327461,32334516,32337499 32107544,32216459,32294146,32306122,32328555,32334667,32340720 Gene ID= ENSG00000151746.13 TPM= 2.72 Transcript Type= NA chr12 32679200 32745552 32679200 32745552 + ENST00000452533.6@DNM1L ENST00000452533.6 protein_coding 32679200,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32738264,32740064,32740409,32742589,32743354 32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32738296,32740240,32740518,32742748,32745552 Gene ID= ENSG00000087470.17 TPM= 4.53 Transcript Type= protein_coding chr12 32679290 32743612 32679290 32743612 + ENST00000549701.5@DNM1L ENST00000549701.5 protein_coding 32679290,32701415,32707367,32708153,32710929,32713209,32718643,32720664,32722427,32731014,32731356,32731854,32733715,32737105,32737865,32738264,32740064,32740409,32742589,32743354 32679465,32701562,32707413,32708224,32711015,32713371,32718763,32720795,32722633,32731134,32731511,32731943,32733807,32737161,32737942,32738296,32740240,32740518,32742748,32743612 Gene ID= ENSG00000087470.17 TPM= 3.62 Transcript Type= protein_coding chr12 32746544 32755902 32746544 32755902 - ENST00000324868.12@YARS2 ENST00000324868.12 protein_coding 32755096,32753918,32750719,32749937,32746544 32755902,32754085,32750874,32750107,32747363 Gene ID= ENSG00000139131.12 TPM= 20.83 Transcript Type= protein_coding chr12 34022281 34028302 34022281 34028302 + ENST00000266483.6@ALG10 ENST00000266483.6 protein_coding 34022281,34023962,34025863 34022770,34024159,34028302 Gene ID= ENSG00000139133.6 TPM= 3.62 Transcript Type= protein_coding chr12 38316578 38329728 38316578 38329728 + ENST00000308742.8@ALG10B ENST00000308742.8 protein_coding 38316578,38318261,38320161 38317064,38318458,38329728 Gene ID= ENSG00000175548.8 TPM= 2.72 Transcript Type= protein_coding chr12 38652185 38905631 38652185 38905631 - ENST00000331366.9@CPNE8 ENST00000331366.9 protein_coding 38905437,38874471,38873004,38848559,38839916,38829379,38776238,38767635,38762112,38760847,38730283,38724846,38723772,38702875,38693657,38685490,38677452,38675717,38670729,38652185 38905631,38874511,38873050,38848662,38839955,38829455,38776301,38767738,38762216,38760888,38730358,38724899,38723833,38702921,38693838,38685617,38677554,38675774,38670802,38654070 Gene ID= ENSG00000139117.13 TPM= 4.53 Transcript Type= protein_coding chr12 39293228 39312826 39293228 39312826 - ENST00000547733.1@KIF21A ENST00000547733.1 protein_coding 39311417,39309586,39307565,39304821,39302965,39301480,39293228 39312826,39309766,39307729,39304938,39303135,39301679,39294517 Gene ID= ENSG00000139116.18 TPM= 1.81 Transcript Type= retained_intron chr12 40908354 41072406 40908354 41072406 + ENST00000347616.5@CNTN1 ENST00000347616.5 protein_coding 40908354,40910073,40918639,40922256,40924557,40929796,40933461,40933697,40936781,40937570,40939335,40943597,40943995,40959114,40980909,40993120,41014228,41016682,41020337,41025150,41027857,41029063,41069959 40908493,40910105,40918771,40922428,40924652,40930002,40933560,40933878,40936905,40937687,40939485,40943724,40944170,40959234,40981067,40993269,41014298,41016916,41020440,41025336,41027969,41029219,41072406 Gene ID= ENSG00000018236.14 TPM= 6.34 Transcript Type= protein_coding chr12 42159124 42238248 42159124 42238248 - ENST00000534854.6@YAF2 ENST00000534854.6 protein_coding 42238155,42237599,42161613,42159124 42238248,42237724,42161765,42160826 Gene ID= ENSG00000015153.14 TPM= 4.53 Transcript Type= protein_coding chr12 42326146 42441955 42326146 42441955 + transcript1206.chr12.nic@PPHLN1 transcript1206.chr12.nic protein_coding 42326146,42335883,42351885,42355161,42374638,42374863,42384940,42387456,42393570,42398854,42441315 42326229,42335974,42352049,42355222,42374733,42375074,42384996,42387535,42393689,42398994,42441955 Gene ID= ENSG00000134283.17 TPM= 1.99 Transcript Type= NA chr12 42326146 42441962 42326146 42441962 + transcript1209.chr12.nic@PPHLN1 transcript1209.chr12.nic protein_coding 42326146,42335883,42355161,42374863,42384940,42387456,42393570,42398854,42441315 42326229,42335974,42355222,42375074,42384996,42387535,42393689,42398994,42441962 Gene ID= ENSG00000134283.17 TPM= 11.05 Transcript Type= NA chr12 42326146 42441958 42326146 42441958 + transcript1212.chr12.nic@PPHLN1 transcript1212.chr12.nic protein_coding 42326146,42335883,42355161,42374863,42387456,42393570,42398854,42441315 42326229,42335974,42355222,42375074,42387535,42393689,42398994,42441958 Gene ID= ENSG00000134283.17 TPM= 1.99 Transcript Type= NA chr12 42326157 42441955 42326157 42441955 + ENST00000358314.11@PPHLN1 ENST00000358314.11 protein_coding 42326157,42335883,42351885,42355161,42374863,42384940,42387456,42393570,42398854,42441315 42326229,42335974,42352049,42355222,42375074,42384996,42387535,42393689,42398994,42441955 Gene ID= ENSG00000134283.17 TPM= 11.05 Transcript Type= protein_coding chr12 42326145 42441950 42326145 42441950 + ENST00000395580.7@PPHLN1 ENST00000395580.7 protein_coding 42326145,42332660,42335883,42351885,42355161,42374863,42384940,42387456,42393570,42398854,42441315 42326229,42332702,42335974,42352049,42355222,42375074,42384996,42387535,42393689,42398994,42441950 Gene ID= ENSG00000134283.17 TPM= 5.61 Transcript Type= protein_coding chr12 42312078 42326105 42312078 42326105 - ENST00000266529.7@ZCRB1 ENST00000266529.7 protein_coding 42325924,42324019,42322418,42317787,42317340,42313874,42313690,42312078 42326105,42324104,42322446,42317898,42317447,42313986,42313765,42313198 Gene ID= ENSG00000139168.7 TPM= 62.48 Transcript Type= protein_coding chr12 43718993 43758817 43718993 43758817 - ENST00000344862.9@PUS7L ENST00000344862.9 protein_coding 43758730,43754336,43748450,43746046,43742457,43738310,43736381,43731705,43718993 43758817,43755261,43748609,43746238,43742555,43738391,43736661,43731758,43730702 Gene ID= ENSG00000129317.14 TPM= 5.43 Transcript Type= protein_coding chr12 43793724 43806318 43793724 43806318 - transcript1223.chr12.nic@TWF1 transcript1223.chr12.nic protein_coding 43806221,43804495,43804176,43802286,43800435,43799398,43797708,43797302,43796976,43793724 43806318,43804572,43804240,43802464,43800530,43799502,43797833,43797452,43797097,43795755 Gene ID= ENSG00000151239.13 TPM= 7.85 Transcript Type= NA chr12 43793725 43806262 43793725 43806262 - ENST00000547459.5@TWF1 ENST00000547459.5 protein_coding 43805831,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793725 43806262,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755 Gene ID= ENSG00000151239.13 TPM= 5.13 Transcript Type= nonsense_mediated_decay chr12 43793723 43806375 43793723 43806375 - ENST00000395510.6@TWF1 ENST00000395510.6 protein_coding 43806221,43804495,43802286,43800435,43799398,43797708,43797302,43796976,43793723 43806375,43804572,43802464,43800530,43799502,43797833,43797452,43797097,43795755 Gene ID= ENSG00000151239.13 TPM= 126.48 Transcript Type= protein_coding chr12 43836098 44389758 43836098 44389758 + ENST00000266534.7@TMEM117 ENST00000266534.7 protein_coding 43836098,43844624,43944210,44143525,44211290,44299580,44376595,44388026 43836196,43844928,43944342,44143624,44211387,44299739,44376724,44389758 Gene ID= ENSG00000139173.9 TPM= 4.53 Transcript Type= protein_coding chr12 45173104 45216026 45173104 45216026 - transcript1232.chr12.nic@PLEKHA8P1 transcript1232.chr12.nic transcribed_processed_pseudogene 45215940,45190794,45176241,45173104 45216026,45190961,45176433,45174642 Gene ID= ENSG00000134297.6 TPM= 1.81 Transcript Type= NA chr12 45216120 45432351 45216120 45432351 + ENST00000320560.12@ANO6 ENST00000320560.12 protein_coding 45216120,45302014,45331295,45347022,45348028,45348518,45350659,45357290,45367688,45378053,45388161,45390421,45401795,45403072,45403439,45409357,45416699,45421071,45422957,45429105 45216391,45302093,45331423,45347087,45348315,45348631,45350774,45357424,45367793,45378113,45388303,45390498,45402020,45403241,45403536,45409487,45416904,45421273,45423062,45432351 Gene ID= ENSG00000177119.15 TPM= 30.79 Transcript Type= protein_coding chr12 45729665 45908040 45729665 45908040 + ENST00000334344.10@ARID2 ENST00000334344.10 protein_coding 45729665,45730044,45731217,45811418,45817670,45821420,45836589,45836741,45837321,45837498,45839329,45846856,45848836,45849580,45850036,45860801,45891780,45892011,45893420,45893630,45904934 45729928,45730137,45731314,45811551,45817888,45821487,45836655,45836991,45837417,45837707,45839496,45846937,45848970,45849776,45852896,45860949,45891918,45892096,45893543,45893721,45908040 Gene ID= ENSG00000189079.15 TPM= 5.43 Transcript Type= protein_coding chr12 45921409 45990577 45921409 45990577 - transcript1245.chr12.nnic@SCAF11 transcript1245.chr12.nnic protein_coding 45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45928653,45926142,45924728,45922936,45922463,45921409 45990577,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859,45926291,45925074,45923154,45922582,45922194 Gene ID= ENSG00000139218.17 TPM= 2.26 Transcript Type= NA chr12 45919134 45990563 45919134 45990563 - transcript1250.chr12.nic@SCAF11 transcript1250.chr12.nic protein_coding 45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926142,45924728,45922936,45922463,45919134 45990563,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859,45925074,45923154,45922582,45919309 Gene ID= ENSG00000139218.17 TPM= 3.17 Transcript Type= NA chr12 45919131 45990565 45919131 45990565 - ENST00000369367.7@SCAF11 ENST00000369367.7 protein_coding 45990353,45964107,45961700,45951650,45948437,45945249,45934447,45934176,45933131,45931506,45926142,45924728,45922936,45922463,45919131 45990565,45964188,45961857,45951727,45948537,45945313,45934505,45934285,45933232,45931612,45928859,45925074,45923154,45922582,45922194 Gene ID= ENSG00000139218.17 TPM= 9.96 Transcript Type= protein_coding chr12 45960455 45990580 45960455 45990580 - ENST00000395453.2@SCAF11 ENST00000395453.2 protein_coding 45990353,45964107,45961700,45960455 45990580,45964188,45961857,45961322 Gene ID= ENSG00000139218.17 TPM= 1.81 Transcript Type= protein_coding chr12 46358189 46372867 46358189 46372867 - ENST00000256689.9@SLC38A2 ENST00000256689.9 protein_coding 46372509,46371178,46370776,46370512,46367267,46367076,46366864,46365107,46364644,46364389,46363924,46363726,46363021,46362494,46362284,46358189 46372867,46371379,46370857,46370627,46367340,46367168,46366945,46365189,46364702,46364556,46364003,46363826,46363145,46362638,46362381,46361209 Gene ID= ENSG00000134294.13 TPM= 182.01 Transcript Type= protein_coding chr12 46383661 46652575 46383661 46652575 + transcript1263.chr12.nnic@AC008014.1 transcript1263.chr12.nnic lincRNA 46383661,46387747,46455012,46652390 46383713,46387972,46455141,46652575 Gene ID= ENSG00000257261.5 TPM= 6.34 Transcript Type= NA chr12 46383661 46652575 46383661 46652575 + transcript1264.chr12.nnic@AC008014.1 transcript1264.chr12.nnic lincRNA 46383661,46387747,46470153,46652390 46383713,46387972,46470262,46652575 Gene ID= ENSG00000257261.5 TPM= 5.43 Transcript Type= NA chr12 47076600 47079951 47076600 47079951 - ENST00000429635.1@AMIGO2 ENST00000429635.1 protein_coding 47079462,47079147,47076600 47079951,47079248,47079065 Gene ID= ENSG00000139211.6 TPM= 6.34 Transcript Type= protein_coding chr12 47079589 47236662 47079589 47236662 + transcript1273.chr12.nnic@PCED1B transcript1273.chr12.nnic protein_coding 47079589,47104113,47212597,47216486,47235007 47079725,47104195,47212653,47216689,47236662 Gene ID= ENSG00000179715.12 TPM= 3.62 Transcript Type= NA chr12 47079614 47236662 47079614 47236662 + transcript1278.chr12.nnic@PCED1B transcript1278.chr12.nnic protein_coding 47079614,47104113,47216486,47235007 47079725,47104195,47216689,47236662 Gene ID= ENSG00000179715.12 TPM= 4.53 Transcript Type= NA chr12 47079603 47236662 47079603 47236662 + ENST00000432328.2@PCED1B ENST00000432328.2 protein_coding 47079603,47104113,47235007 47079725,47104195,47236662 Gene ID= ENSG00000179715.12 TPM= 2.72 Transcript Type= protein_coding chr12 47661249 47706061 47661249 47706061 - ENST00000005386.7@RPAP3 ENST00000005386.7 protein_coding 47705952,47702688,47701464,47697597,47696276,47690518,47689125,47687876,47686780,47681696,47679704,47679493,47670107,47668916,47667754,47666980,47661249 47706061,47702846,47701604,47697719,47696403,47690639,47689195,47688001,47686907,47681817,47679774,47679594,47670345,47669102,47667851,47667080,47663590 Gene ID= ENSG00000005175.9 TPM= 12.68 Transcript Type= protein_coding chr12 47699533 47706044 47699533 47706044 - transcript1291.chr12.nic@RPAP3 transcript1291.chr12.nic protein_coding 47705952,47702688,47701464,47699533 47706044,47702846,47701604,47700164 Gene ID= ENSG00000005175.9 TPM= 1.81 Transcript Type= NA chr12 47706087 47732351 47706087 47732351 + transcript1331.chr12.nnic@AC004241.1 transcript1331.chr12.nnic antisense_RNA 47706087,47719147,47719600,47728887 47706163,47719272,47719699,47732351 Gene ID= ENSG00000257433.5 TPM= 1.81 Transcript Type= NA chr12 47737257 47758206 47737257 47758206 - transcript1296.chr12.nic@RAPGEF3 transcript1296.chr12.nic protein_coding 47757866,47751916,47751723,47751399,47751048,47750341,47749930,47749741,47749390,47748819,47748454,47748074,47747712,47747544,47746860,47743987,47743530,47741505,47740915,47740642,47740305,47740141,47739143,47738690,47738193,47738022,47737257 47758206,47751969,47751829,47751520,47751216,47750425,47749990,47749817,47749536,47748931,47748542,47748152,47747862,47747626,47746899,47744068,47743676,47741602,47741040,47740823,47740395,47740191,47739230,47738754,47738247,47738093,47737685 Gene ID= ENSG00000079337.15 TPM= 1.81 Transcript Type= NA chr12 47773208 47782750 47773208 47782750 + transcript1332.chr12.nic@SLC48A1 transcript1332.chr12.nic protein_coding 47773208,47779028,47780145,47782218 47773440,47779195,47780289,47782750 Gene ID= ENSG00000211584.13 TPM= 2.72 Transcript Type= NA chr12 47773208 47782753 47773208 47782753 + ENST00000442218.2@SLC48A1 ENST00000442218.2 protein_coding 47773208,47779028,47780145 47773440,47779195,47782753 Gene ID= ENSG00000211584.13 TPM= 183.83 Transcript Type= protein_coding chr12 47782722 47819866 47782722 47819866 - ENST00000354334.7@HDAC7 ENST00000354334.7 protein_coding 47819767,47802224,47798785,47798562,47798108,47797384,47797017,47796207,47795587,47795184,47794760,47793369,47791871,47791586,47791259,47789813,47789523,47789261,47788045,47787712,47786585,47785752,47785387,47784079,47782722 47819866,47802274,47798972,47798652,47798219,47797499,47797142,47796298,47795767,47795380,47794933,47793588,47792004,47791706,47791308,47789920,47789578,47789348,47788164,47787809,47786703,47785885,47785471,47784217,47783886 Gene ID= ENSG00000061273.17 TPM= 64.75 Transcript Type= protein_coding chr12 47841537 47905035 47841537 47905035 - transcript1338.chr12.nnic@VDR transcript1338.chr12.nnic protein_coding 47904955,47882694,47878968,47865047,47857504,47857129,47855630,47846657,47846335,47841537 47905035,47882774,47879115,47865177,47857688,47857249,47855801,47846808,47846413,47845005 Gene ID= ENSG00000111424.10 TPM= 7.92 Transcript Type= NA chr12 47841537 47905022 47841537 47905022 - ENST00000549336.5@VDR ENST00000549336.5 protein_coding 47904955,47882694,47878968,47865047,47857504,47857129,47855630,47846657,47846335,47841537 47905022,47882774,47879115,47865177,47857688,47857249,47855801,47846808,47846451,47845005 Gene ID= ENSG00000111424.10 TPM= 31.47 Transcript Type= protein_coding chr12 47841539 47905031 47841539 47905031 - ENST00000229022.7@VDR ENST00000229022.7 protein_coding 47904955,47899837,47882694,47878968,47865047,47857504,47857129,47855630,47846657,47846335,47841539 47905031,47899958,47882774,47879115,47865177,47857688,47857249,47855801,47846808,47846451,47845005 Gene ID= ENSG00000111424.10 TPM= 14.26 Transcript Type= protein_coding chr12 47842628 47905003 47842628 47905003 - ENST00000550325.5@VDR ENST00000550325.5 protein_coding 47904564,47882694,47878968,47865047,47857504,47857129,47855630,47846657,47846335,47842628 47905003,47882774,47879115,47865177,47857688,47857249,47855801,47846808,47846451,47845005 Gene ID= ENSG00000111424.10 TPM= 2.49 Transcript Type= protein_coding chr12 47963635 47968849 47963635 47968849 + ENST00000449758.6@TMEM106C ENST00000449758.6 protein_coding 47963635,47964209,47965282,47965838,47966089,47966683,47967208,47968133 47963704,47964423,47965345,47965997,47966172,47966732,47967261,47968849 Gene ID= ENSG00000134291.11 TPM= 1.81 Transcript Type= protein_coding chr12 48119226 48146404 48119226 48146404 + ENST00000359794.9@PFKM ENST00000359794.9 protein_coding 48119226,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564 48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146404 Gene ID= ENSG00000152556.15 TPM= 202.1 Transcript Type= protein_coding chr12 48119313 48146105 48119313 48146105 + transcript1369.chr12.nic@PFKM transcript1369.chr12.nic protein_coding 48119313,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564 48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146105 Gene ID= ENSG00000152556.15 TPM= 22.89 Transcript Type= NA chr12 48105923 48146104 48105923 48146104 + ENST00000340802.10@PFKM ENST00000340802.10 protein_coding 48105923,48107365,48108072,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48135291,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564 48106137,48107455,48108194,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135038,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104 Gene ID= ENSG00000152556.15 TPM= 7.41 Transcript Type= protein_coding chr12 48119343 48146104 48119343 48146104 + ENST00000546964.5@PFKM ENST00000546964.5 protein_coding 48119343,48122767,48130363,48131316,48132868,48133315,48134232,48134721,48134943,48137721,48139285,48139849,48140722,48141311,48141740,48141914,48142782,48143753,48144046,48145031,48145210,48145564 48119406,48122859,48130436,48131393,48133057,48133480,48134276,48134829,48135383,48137846,48139349,48139912,48140871,48141381,48141827,48142066,48142946,48143814,48144157,48145130,48145315,48146104 Gene ID= ENSG00000152556.15 TPM= 4.39 Transcript Type= retained_intron chr12 48147788 48157595 48147788 48157595 - ENST00000317697.7@ASB8 ENST00000317697.7 protein_coding 48157459,48153368,48151201,48147788 48157595,48153529,48151305,48149998 Gene ID= ENSG00000177981.10 TPM= 94.63 Transcript Type= protein_coding chr12 48147789 48157595 48147789 48157595 - ENST00000536549.5@ASB8 ENST00000536549.5 protein_coding 48157459,48153368,48151201,48147789 48157595,48153525,48151305,48149998 Gene ID= ENSG00000177981.10 TPM= 20.37 Transcript Type= protein_coding chr12 48340012 48350794 48340012 48350794 - transcript1382.chr12.nic@ZNF641 transcript1382.chr12.nic protein_coding 48350119,48347907,48347252,48345345,48344599,48340012 48350794,48348115,48347343,48345474,48344712,48343727 Gene ID= ENSG00000167528.12 TPM= 8.9 Transcript Type= NA chr12 48340012 48351249 48340012 48351249 - transcript1384.chr12.nic@ZNF641 transcript1384.chr12.nic protein_coding 48351208,48347907,48347252,48345345,48344599,48340012 48351249,48348115,48347343,48345474,48344712,48343727 Gene ID= ENSG00000167528.12 TPM= 5.28 Transcript Type= NA chr12 48340012 48350887 48340012 48350887 - transcript1388.chr12.nnic@ZNF641 transcript1388.chr12.nnic protein_coding 48350786,48347907,48347252,48344599,48340012 48350887,48348115,48347343,48344712,48343727 Gene ID= ENSG00000167528.12 TPM= 3.92 Transcript Type= NA chr12 48653365 48682254 48653365 48682254 - transcript1392.chr12.nic@KANSL2 transcript1392.chr12.nic protein_coding 48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660468,48654941,48653365 48682254,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175 Gene ID= ENSG00000139620.12 TPM= 3.62 Transcript Type= NA chr12 48653402 48682254 48653402 48682254 - transcript1393.chr12.nic@KANSL2 transcript1393.chr12.nic protein_coding 48682187,48681382,48679655,48671799,48669106,48667693,48660366,48654941,48653402 48682254,48681641,48679833,48671962,48669272,48667789,48660619,48655060,48654175 Gene ID= ENSG00000139620.12 TPM= 2.72 Transcript Type= NA chr12 48653416 48682225 48653416 48682225 - ENST00000420613.6@KANSL2 ENST00000420613.6 protein_coding 48682187,48681382,48679655,48679036,48671799,48669106,48667693,48660366,48654941,48653416 48682225,48681641,48679833,48679150,48671962,48669272,48667789,48660619,48655060,48654175 Gene ID= ENSG00000139620.12 TPM= 19.92 Transcript Type= protein_coding chr12 48766198 48789101 48766198 48789101 - transcript1400.chr12.nic@ADCY6 transcript1400.chr12.nic protein_coding 48788906,48782571,48778108,48777615,48777410,48777104,48776428,48776209,48775963,48775673,48775303,48774957,48774691,48774402,48773940,48773469,48772508,48772295,48771710,48770766,48768937,48766198 48789101,48783438,48778257,48777736,48777521,48777231,48776586,48776350,48776091,48775698,48775450,48775054,48774778,48774518,48774098,48773647,48772543,48772424,48771973,48770970,48769061,48768716 Gene ID= ENSG00000174233.11 TPM= 33.51 Transcript Type= NA chr12 48814893 48828941 48814893 48828941 + ENST00000548860.5@CACNB3 ENST00000548860.5 protein_coding 48814893,48816929,48823344,48823681,48824258,48824669,48825434,48825660,48826367,48826759,48826974,48827585 48815728,48817260,48823466,48823803,48824373,48825243,48825492,48825769,48826518,48826854,48827123,48828941 Gene ID= ENSG00000167535.7 TPM= 2.72 Transcript Type= retained_intron chr12 48829757 48852174 48829757 48852174 - transcript1407.chr12.nic@DDX23 transcript1407.chr12.nic protein_coding 48852084,48845574,48843940,48840013,48839844,48837942,48837524,48837281,48836894,48836569,48836121,48835120,48834320,48833277,48832422,48832078,48831142,48829757 48852174,48845782,48844050,48840106,48839909,48838080,48837657,48837393,48837037,48836794,48836266,48835214,48834497,48833519,48832573,48832186,48831316,48830692 Gene ID= ENSG00000174243.9 TPM= 1.81 Transcript Type= NA chr12 48829764 48852163 48829764 48852163 - ENST00000308025.7@DDX23 ENST00000308025.7 protein_coding 48852084,48845574,48843940,48840013,48839844,48837942,48837524,48837281,48836894,48836569,48836121,48834320,48833277,48832422,48832078,48831142,48829764 48852163,48845782,48844050,48840106,48839909,48838080,48837657,48837393,48837037,48836794,48836266,48834497,48833519,48832573,48832186,48831316,48830692 Gene ID= ENSG00000174243.9 TPM= 59.77 Transcript Type= protein_coding chr12 48921959 48925827 48921959 48925827 - ENST00000550765.5@FKBP11 ENST00000550765.5 protein_coding 48925300,48925046,48924561,48924223,48923782,48921959 48925827,48925111,48924648,48924256,48923852,48922201 Gene ID= ENSG00000134285.10 TPM= 20.83 Transcript Type= protein_coding chr12 48935723 48957551 48935723 48957551 - ENST00000256682.8@ARF3 ENST00000256682.8 protein_coding 48957310,48940948,48939997,48939655,48935723 48957551,48941188,48940107,48939779,48939108 Gene ID= ENSG00000134287.9 TPM= 132.21 Transcript Type= protein_coding chr12 48998335 49019240 48998335 49019240 + transcript1431.chr12.nnic@DDN-AS1 transcript1431.chr12.nnic antisense_RNA 48998335,49009309,49017403 48998690,49009389,49019240 Gene ID= ENSG00000257913.2 TPM= 1.81 Transcript Type= NA chr12 49002312 49018787 49002312 49018787 - ENST00000546531.5@PRKAG1 ENST00000546531.5 protein_coding 49018732,49013062,49005743,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002312 49018787,49013110,49005852,49005592,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006 Gene ID= ENSG00000181929.11 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr12 49002278 49018764 49002278 49018764 - ENST00000547306.5@PRKAG1 ENST00000547306.5 protein_coding 49018732,49013062,49005462,49005306,49005120,49004964,49004507,49003757,49003558,49003144,49002278 49018764,49013110,49005543,49005364,49005165,49005018,49004633,49003922,49003595,49003290,49003006 Gene ID= ENSG00000181929.11 TPM= 12.68 Transcript Type= protein_coding chr12 49096551 49110898 49096551 49110898 - ENST00000267102.12@LMBR1L ENST00000267102.12 protein_coding 49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49096551 49110898,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101323,49100646,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 33.8 Transcript Type= protein_coding chr12 49097142 49110897 49097142 49110897 - transcript1448.chr12.nic@LMBR1L transcript1448.chr12.nic protein_coding 49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102120,49101472,49101250,49100556,49100388,49097944,49097142 49110897,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49101549,49101323,49100646,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 2.11 Transcript Type= NA chr12 49097144 49110712 49097144 49110712 - transcript1450.chr12.nic@LMBR1L transcript1450.chr12.nic protein_coding 49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49100556,49100388,49097944,49097144 49110712,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101323,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 1.81 Transcript Type= NA chr12 49097143 49110897 49097143 49110897 - transcript1452.chr12.nic@LMBR1L transcript1452.chr12.nic protein_coding 49110484,49105924,49104746,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49097143 49110897,49107045,49104885,49104551,49103159,49102951,49102540,49102376,49102196,49101549,49101263,49100646,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 1.81 Transcript Type= NA chr12 49097142 49110897 49097142 49110897 - transcript1453.chr12.nic@LMBR1L transcript1453.chr12.nic protein_coding 49110484,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49097142 49110897,49107045,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101323,49100646,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 3.62 Transcript Type= NA chr12 49096552 49110897 49096552 49110897 - transcript1454.chr12.nic@LMBR1L transcript1454.chr12.nic protein_coding 49110484,49105924,49104746,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49096552 49110897,49107045,49104885,49104551,49103159,49102951,49102540,49102376,49102196,49101549,49101323,49100646,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 4.53 Transcript Type= NA chr12 49097142 49110850 49097142 49110850 - ENST00000547382.5@LMBR1L ENST00000547382.5 protein_coding 49110484,49106961,49105924,49104746,49104448,49103687,49103091,49102887,49102468,49102293,49102120,49101472,49101250,49100556,49100388,49097944,49097142 49110850,49107045,49105957,49104885,49104551,49103813,49103159,49102951,49102540,49102376,49102196,49101549,49101263,49100646,49100454,49098105,49097739 Gene ID= ENSG00000139636.15 TPM= 18.41 Transcript Type= protein_coding chr12 49127782 49131395 49127782 49131395 - ENST00000336023.9@TUBA1B ENST00000336023.9 protein_coding 49131298,49129500,49129242,49127782 49131395,49129722,49129390,49128938 Gene ID= ENSG00000123416.15 TPM= 541.97 Transcript Type= protein_coding chr12 49184796 49189324 49184796 49189324 - ENST00000301071.11@TUBA1A ENST00000301071.11 protein_coding 49188977,49186611,49186310,49184796 49189324,49186833,49186458,49185990 Gene ID= ENSG00000167552.13 TPM= 485.37 Transcript Type= protein_coding chr12 49264907 49274603 49264907 49274603 + ENST00000301072.10@TUBA1C ENST00000301072.10 protein_coding 49264907,49269465,49269828,49272253 49265184,49269687,49269976,49274603 Gene ID= ENSG00000167553.15 TPM= 35.32 Transcript Type= protein_coding chr12 49367460 49527441 49367460 49527441 + transcript1483.chr12.nic@SPATS2 transcript1483.chr12.nic protein_coding 49367460,49406473,49460770,49484590,49489465,49490682,49494741,49496833,49500070,49514555,49519073,49522751,49524682,49525944 49367587,49406565,49461037,49484669,49489573,49490731,49495002,49497009,49500205,49514613,49519182,49522853,49524896,49527441 Gene ID= ENSG00000123352.17 TPM= 2.26 Transcript Type= NA chr12 49367475 49527419 49367475 49527419 + ENST00000321898.10@SPATS2 ENST00000321898.10 protein_coding 49367475,49460770,49484590,49489465,49490682,49494741,49496833,49500070,49514555,49519073,49522751,49524682,49525944 49367587,49461037,49484669,49489573,49490731,49495002,49497009,49500205,49514613,49519182,49522853,49524896,49527419 Gene ID= ENSG00000123352.17 TPM= 8.6 Transcript Type= protein_coding chr12 49558295 49568145 49558295 49568145 - ENST00000546244.5@MCRS1 ENST00000546244.5 protein_coding 49568048,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558295 49568145,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729 Gene ID= ENSG00000187778.13 TPM= 1.2 Transcript Type= protein_coding chr12 49558320 49568153 49558320 49568153 - ENST00000343810.8@MCRS1 ENST00000343810.8 protein_coding 49568048,49566722,49566077,49565529,49564737,49564481,49563438,49563001,49560295,49559939,49559729,49559453,49559214,49558843,49558320 49568153,49566841,49566215,49565667,49564895,49564590,49563546,49563139,49560370,49559967,49559821,49559535,49559301,49558970,49558729 Gene ID= ENSG00000187778.13 TPM= 108.67 Transcript Type= protein_coding chr12 49623401 49644666 49623401 49644666 + transcript1502.chr12.nic@PRPF40B transcript1502.chr12.nic protein_coding 49623401,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642927,49643223,49643691,49643861,49644100 49623593,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644666 Gene ID= ENSG00000110844.13 TPM= 7.4 Transcript Type= NA chr12 49623783 49644666 49623783 49644666 + transcript1504.chr12.nnic@PRPF40B transcript1504.chr12.nnic protein_coding 49623783,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691,49643861,49644100 49623819,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644666 Gene ID= ENSG00000110844.13 TPM= 3.78 Transcript Type= NA chr12 49623414 49644666 49623414 49644666 + transcript1510.chr12.nic@PRPF40B transcript1510.chr12.nic protein_coding 49623414,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642927,49643223,49643691,49643861,49644100 49623593,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644666 Gene ID= ENSG00000110844.13 TPM= 3.78 Transcript Type= NA chr12 49623436 49644665 49623436 49644665 + ENST00000548825.6@PRPF40B ENST00000548825.6 protein_coding 49623436,49630545,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642930,49643223,49643691,49643861,49644100 49623593,49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644665 Gene ID= ENSG00000110844.13 TPM= 20.08 Transcript Type= protein_coding chr12 49630544 49644666 49630544 49644666 + ENST00000380281.5@PRPF40B ENST00000380281.5 protein_coding 49630544,49631401,49631860,49632596,49632855,49633014,49633427,49633637,49633886,49634332,49634538,49635099,49635365,49635843,49636716,49637470,49637733,49641908,49642235,49642580,49642927,49643223,49643691,49643861,49644100 49630625,49631544,49631925,49632623,49632880,49633124,49633547,49633661,49634092,49634455,49634602,49635263,49635473,49635993,49636849,49637584,49637824,49642024,49642372,49642675,49643016,49643397,49643752,49644004,49644666 Gene ID= ENSG00000110844.13 TPM= 5.59 Transcript Type= protein_coding chr12 49636499 49707414 49636499 49707414 - ENST00000335154.9@FMNL3 ENST00000335154.9 protein_coding 49707055,49668471,49666127,49665832,49661966,49658442,49657082,49656823,49656404,49654910,49654192,49653725,49653226,49651933,49651382,49651168,49650676,49649691,49649470,49649259,49649029,49648193,49647703,49647276,49646886,49636499 49707414,49668554,49666207,49665908,49662049,49658594,49657190,49656899,49656497,49654984,49654302,49653874,49653327,49652212,49651450,49651292,49650878,49649925,49649538,49649339,49649158,49648353,49647804,49647368,49647009,49645903 Gene ID= ENSG00000161791.13 TPM= 35.32 Transcript Type= protein_coding chr12 49741809 49764934 49741809 49764934 + ENST00000423828.5@TMBIM6 ENST00000423828.5 protein_coding 49741809,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873 49742280,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764934 Gene ID= ENSG00000139644.12 TPM= 18.46 Transcript Type= protein_coding chr12 49741557 49764933 49741557 49764933 + ENST00000267115.9@TMBIM6 ENST00000267115.9 protein_coding 49741557,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873 49741611,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764933 Gene ID= ENSG00000139644.12 TPM= 1252.45 Transcript Type= protein_coding chr12 49741574 49764726 49741574 49764726 + ENST00000549385.5@TMBIM6 ENST00000549385.5 protein_coding 49741574,49741957,49752464,49752973,49755635,49758227,49758383,49758683,49759221,49761704,49762873 49741611,49742115,49752549,49753081,49755755,49758275,49758480,49758762,49759321,49761779,49764726 Gene ID= ENSG00000139644.12 TPM= 16.32 Transcript Type= protein_coding chr12 49791140 49828414 49791140 49828414 - transcript1539.chr12.nnic@NCKAP5L transcript1539.chr12.nnic protein_coding 49828322,49805980,49803922,49803097,49802958,49801848,49798350,49794765,49793734,49793352,49792678,49792446,49791140 49828414,49806041,49804050,49803165,49802996,49801967,49798463,49797394,49793896,49793433,49792986,49792588,49792051 Gene ID= ENSG00000167566.16 TPM= 3.62 Transcript Type= NA chr12 49791146 49828425 49791146 49828425 - ENST00000335999.6@NCKAP5L ENST00000335999.6 protein_coding 49828322,49805980,49803922,49803097,49802958,49801848,49798350,49794765,49793734,49793352,49792678,49792446,49791146 49828425,49806041,49804080,49803165,49802996,49801967,49798463,49797394,49793896,49793433,49792986,49792588,49792051 Gene ID= ENSG00000167566.16 TPM= 45.28 Transcript Type= protein_coding chr12 49836039 49843129 49836039 49843129 - ENST00000333924.5@BCDIN3D ENST00000333924.5 protein_coding 49842854,49836039 49843129,49839015 Gene ID= ENSG00000186666.5 TPM= 4.53 Transcript Type= protein_coding chr12 49866896 49903887 49866896 49903887 - ENST00000320634.7@FAIM2 ENST00000320634.7 protein_coding 49903778,49901130,49897987,49897519,49897031,49891064,49890683,49890117,49889481,49889107,49887386,49866896 49903887,49901325,49898090,49897583,49897084,49891114,49890722,49890154,49889568,49889202,49887439,49870653 Gene ID= ENSG00000135472.8 TPM= 4.53 Transcript Type= protein_coding chr12 49950737 49957087 49950737 49957087 + transcript1549.chr12.nic@AQP2 transcript1549.chr12.nic protein_coding 49950737,49954155,49954630,49955399 49951190,49954445,49954710,49957087 Gene ID= ENSG00000167580.7 TPM= 5.43 Transcript Type= NA chr12 49950746 49958881 49950746 49958881 + ENST00000199280.3@AQP2 ENST00000199280.3 protein_coding 49950746,49954155,49954630,49955399 49951190,49954319,49954710,49958881 Gene ID= ENSG00000167580.7 TPM= 80.59 Transcript Type= protein_coding chr12 49989162 50025461 49989162 50025461 - ENST00000312377.9@RACGAP1 ENST00000312377.9 protein_coding 50025398,50016631,50006434,50005256,50004235,50002247,50001172,49999616,49999141,49997040,49994414,49994131,49992550,49992245,49991998,49990684,49989162 50025461,50016719,50006636,50005392,50004304,50002300,50001252,49999733,49999271,49997204,49994509,49994329,49992655,49992377,49992133,49990792,49990343 Gene ID= ENSG00000161800.12 TPM= 3.62 Transcript Type= protein_coding chr12 50085173 50100640 50085173 50100640 + transcript1561.chr12.nnic@SMARCD1 transcript1561.chr12.nnic protein_coding 50085173,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50096850,50098714,50098947,50099797,50100054 50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50096972,50098815,50099565,50099900,50100640 Gene ID= ENSG00000066117.14 TPM= 2.94 Transcript Type= NA chr12 50084972 50100712 50084972 50100712 + ENST00000394963.8@SMARCD1 ENST00000394963.8 protein_coding 50084972,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50096850,50098714,50098947 50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50096972,50098815,50100712 Gene ID= ENSG00000066117.14 TPM= 9.89 Transcript Type= protein_coding chr12 50085173 50100648 50085173 50100648 + transcript1565.chr12.nic@SMARCD1 transcript1565.chr12.nic protein_coding 50085173,50086161,50086621,50086756,50088521,50089884,50090241,50090493,50094437,50096850,50098714,50098947 50085546,50086348,50086663,50086878,50088637,50089985,50090402,50090590,50094572,50096972,50098815,50100648 Gene ID= ENSG00000066117.14 TPM= 2.64 Transcript Type= NA chr12 50085200 50100642 50085200 50100642 + ENST00000381513.8@SMARCD1 ENST00000381513.8 protein_coding 50085200,50086161,50086621,50086756,50087363,50088521,50089884,50090241,50090493,50094437,50098714,50098947 50085546,50086348,50086663,50086878,50087485,50088637,50089985,50090402,50090590,50094572,50098815,50100642 Gene ID= ENSG00000066117.14 TPM= 1.74 Transcript Type= protein_coding chr12 50103819 50111319 50103819 50111319 + ENST00000301149.7@GPD1 ENST00000301149.7 protein_coding 50103819,50104574,50105548,50106288,50106805,50107567,50108024,50109423 50104091,50104751,50105688,50106426,50106917,50107800,50108130,50111319 Gene ID= ENSG00000167588.12 TPM= 2.72 Transcript Type= protein_coding chr12 50112204 50120457 50112204 50120457 + ENST00000550654.1@COX14 ENST00000550654.1 protein_coding 50112204,50118493,50120036 50112301,50118552,50120457 Gene ID= ENSG00000178449.8 TPM= 4.98 Transcript Type= protein_coding chr12 50111979 50120451 50111979 50120451 + ENST00000550487.5@COX14 ENST00000550487.5 protein_coding 50111979,50120036 50112301,50120451 Gene ID= ENSG00000178449.8 TPM= 81.05 Transcript Type= protein_coding chr12 50129799 50167437 50129799 50167437 - transcript1571.chr12.nnic@CERS5 transcript1571.chr12.nnic protein_coding 50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50133933,50129799 50167437,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50134068,50130694 Gene ID= ENSG00000139624.12 TPM= 5.89 Transcript Type= NA chr12 50129799 50167382 50129799 50167382 - transcript1574.chr12.nic@CERS5 transcript1574.chr12.nic protein_coding 50167101,50143952,50143074,50138567,50137728,50135941,50135732,50134546,50129799 50167382,50144057,50143204,50138617,50137820,50136069,50135838,50134702,50130694 Gene ID= ENSG00000139624.12 TPM= 1.81 Transcript Type= NA chr12 50129798 50167422 50129798 50167422 - ENST00000317551.10@CERS5 ENST00000317551.10 protein_coding 50167101,50143952,50143074,50142053,50138567,50137728,50135941,50135732,50134546,50129798 50167422,50144057,50143204,50142110,50138617,50137820,50136069,50135838,50134702,50130694 Gene ID= ENSG00000139624.12 TPM= 35.77 Transcript Type= protein_coding chr12 50175788 50283506 50175788 50283506 - ENST00000394943.7@LIMA1 ENST00000394943.7 protein_coding 50283420,50248633,50231665,50222021,50205984,50204552,50200777,50195830,50192452,50181904,50175788 50283506,50248774,50231710,50222485,50206068,50204700,50200884,50195887,50192564,50182037,50178069 Gene ID= ENSG00000050405.13 TPM= 85.12 Transcript Type= protein_coding chr12 50400899 50480004 50400899 50480004 + ENST00000398473.6@LARP4 ENST00000398473.6 protein_coding 50400899,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50461135,50462582,50466959,50473415,50473999,50475526 50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50461347,50462630,50467120,50473536,50474167,50480004 Gene ID= ENSG00000161813.21 TPM= 12.68 Transcript Type= protein_coding chr12 50400908 50461487 50400908 50461487 + ENST00000522085.5@LARP4 ENST00000522085.5 protein_coding 50400908,50427762,50428935,50430495,50435488,50437735,50440439,50441590,50453460,50454314,50461135 50401028,50427909,50429090,50430570,50435624,50437838,50440549,50441643,50453672,50454417,50461487 Gene ID= ENSG00000161813.21 TPM= 1.81 Transcript Type= protein_coding chr12 50504989 50682628 50504989 50682628 + transcript1611.chr12.nic@DIP2B transcript1611.chr12.nic protein_coding 50504989,50625976,50640724,50660194,50671186,50674474,50675329,50678679,50680672 50505240,50626047,50640852,50660319,50671398,50674629,50675448,50678876,50682628 Gene ID= ENSG00000066084.12 TPM= 1.81 Transcript Type= NA chr12 50764292 50821122 50764292 50821122 + ENST00000262053.7@ATF1 ENST00000262053.7 protein_coding 50764292,50780140,50795909,50809456,50814010,50814280,50819635 50764307,50780238,50796009,50809589,50814192,50814439,50821122 Gene ID= ENSG00000123268.8 TPM= 3.62 Transcript Type= protein_coding chr12 50924667 50932505 50924667 50932505 + transcript1631.chr12.nnic@METTL7A transcript1631.chr12.nnic protein_coding 50924667,50929914,50931712 50925536,50931561,50932505 Gene ID= ENSG00000185432.11 TPM= 76.07 Transcript Type= NA chr12 50924983 50932507 50924983 50932507 + ENST00000547104.1@METTL7A ENST00000547104.1 protein_coding 50924983,50929914,50931615 50925536,50930291,50932507 Gene ID= ENSG00000185432.11 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr12 50979794 51026401 50979794 51026401 - transcript1638.chr12.nic@SLC11A2 transcript1638.chr12.nic protein_coding 51026310,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981639,50979794 51026401,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803,50980058 Gene ID= ENSG00000110911.14 TPM= 6.34 Transcript Type= NA chr12 50985992 51026464 50985992 51026464 - transcript1652.chr12.nic@SLC11A2 transcript1652.chr12.nic protein_coding 51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992 51026464,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435 Gene ID= ENSG00000110911.14 TPM= 10.41 Transcript Type= NA chr12 50979783 51026390 50979783 51026390 - transcript1653.chr12.nic@SLC11A2 transcript1653.chr12.nic protein_coding 51026315,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50979783 51026390,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803 Gene ID= ENSG00000110911.14 TPM= 2.72 Transcript Type= NA chr12 50979820 51026368 50979820 51026368 - ENST00000546636.5@SLC11A2 ENST00000546636.5 protein_coding 51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981639,50979820 51026368,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803,50980058 Gene ID= ENSG00000110911.14 TPM= 10.87 Transcript Type= nonsense_mediated_decay chr12 50981009 51026338 50981009 51026338 - ENST00000547198.5@SLC11A2 ENST00000547198.5 protein_coding 51026315,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50988382,50981009 51026338,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435,50981803 Gene ID= ENSG00000110911.14 TPM= 2.72 Transcript Type= protein_coding chr12 50985992 51026384 50985992 51026384 - ENST00000262052.9@SLC11A2 ENST00000262052.9 protein_coding 51026310,51010695,51008476,51005311,51004788,51000313,50999345,50999174,50996817,50995629,50994544,50992810,50992190,50991599,50990795,50985992 51026384,51010766,51008624,51005436,51004907,51000419,50999415,50999241,50996972,50995787,50994630,50992929,50992339,50991672,50990948,50988435 Gene ID= ENSG00000110911.14 TPM= 18.56 Transcript Type= protein_coding chr12 51048307 51060427 51048307 51060427 + transcript1664.chr12.nic@LETMD1 transcript1664.chr12.nic protein_coding 51048307,51049034,51053812,51055835,51056144,51056350,51058032,51059361 51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060427 Gene ID= ENSG00000050426.15 TPM= 15.15 Transcript Type= NA chr12 51048307 51060427 51048307 51060427 + transcript1669.chr12.nnic@LETMD1 transcript1669.chr12.nnic protein_coding 51048307,51049034,51053778,51056350,51058032,51059361 51048478,51049185,51053860,51056502,51058128,51060427 Gene ID= ENSG00000050426.15 TPM= 4.28 Transcript Type= NA chr12 51048318 51060421 51048318 51060421 + ENST00000262055.8@LETMD1 ENST00000262055.8 protein_coding 51048318,51049034,51052092,51053778,51055835,51056144,51056350,51058032,51059361 51048478,51049185,51052207,51053860,51056021,51056245,51056502,51058128,51060421 Gene ID= ENSG00000050426.15 TPM= 52.28 Transcript Type= protein_coding chr12 51048344 51060363 51048344 51060363 + ENST00000380135.7@LETMD1 ENST00000380135.7 protein_coding 51048344,51049034,51056350,51058006,51059361 51048478,51049185,51056502,51058128,51060363 Gene ID= ENSG00000050426.15 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr12 51048301 51060409 51048301 51060409 + ENST00000547318.5@LETMD1 ENST00000547318.5 protein_coding 51048301,51049034,51053778,51055835,51056144,51056350,51058032,51059361 51048478,51049185,51053860,51056021,51056245,51056502,51058128,51060409 Gene ID= ENSG00000050426.15 TPM= 3.08 Transcript Type= nonsense_mediated_decay chr12 51048341 51060369 51048341 51060369 + ENST00000547008.5@LETMD1 ENST00000547008.5 protein_coding 51048341,51049034,51052092,51056350,51058032,51059361 51048478,51049185,51052207,51056502,51058128,51060369 Gene ID= ENSG00000050426.15 TPM= 9.06 Transcript Type= protein_coding chr12 51064248 51079769 51064248 51079769 - transcript1679.chr12.nic@CSRNP2 transcript1679.chr12.nic protein_coding 51076411,51073823,51067673,51064248 51079769,51074082,51067969,51064669 Gene ID= ENSG00000110925.6 TPM= 5.43 Transcript Type= NA chr12 51061205 51083550 51061205 51083550 - ENST00000228515.5@CSRNP2 ENST00000228515.5 protein_coding 51083339,51076411,51073823,51067673,51061205 51083550,51076647,51074082,51067969,51064669 Gene ID= ENSG00000110925.6 TPM= 13.58 Transcript Type= protein_coding chr12 51186937 51218035 51186937 51218035 - transcript1685.chr12.nic@POU6F1 transcript1685.chr12.nic protein_coding 51217642,51204173,51199747,51198550,51197770,51196799,51195970,51192330,51191596,51186937 51218035,51204368,51199868,51198686,51198023,51196927,51196173,51192471,51191764,51190592 Gene ID= ENSG00000184271.16 TPM= 4.53 Transcript Type= NA chr12 51186937 51198167 51186937 51198167 - ENST00000389243.9@POU6F1 ENST00000389243.9 protein_coding 51197770,51196799,51195970,51192330,51191596,51186937 51198167,51196927,51196173,51192471,51191764,51190592 Gene ID= ENSG00000184271.16 TPM= 1.81 Transcript Type= protein_coding chr12 51238292 51243933 51238292 51243933 + ENST00000412716.7@DAZAP2 ENST00000412716.7 protein_coding 51238292,51240343,51240871,51242330 51238920,51240461,51241116,51243933 Gene ID= ENSG00000183283.15 TPM= 312.87 Transcript Type= protein_coding chr12 51238908 51243784 51238908 51243784 + ENST00000552459.2@DAZAP2 ENST00000552459.2 protein_coding 51238908,51242330 51241116,51243784 Gene ID= ENSG00000183283.15 TPM= 15.85 Transcript Type= retained_intron chr12 51244558 51270890 51244558 51270890 - ENST00000603798.5@SMAGP ENST00000603798.5 protein_coding 51270256,51269245,51246751,51244558 51270890,51269316,51246831,51246119 Gene ID= ENSG00000170545.16 TPM= 13.58 Transcript Type= protein_coding chr12 51245388 51269949 51245388 51269949 - ENST00000603864.5@SMAGP ENST00000603864.5 protein_coding 51269245,51246751,51245388 51269949,51246831,51246119 Gene ID= ENSG00000170545.16 TPM= 8.15 Transcript Type= protein_coding chr12 51281038 51324198 51281038 51324198 - ENST00000615107.4@BIN2 ENST00000615107.4 protein_coding 51324022,51313823,51303087,51302686,51302020,51299607,51299203,51297089,51295796,51291591,51288108,51284716,51281038 51324198,51313903,51303141,51302780,51302115,51299714,51299288,51297164,51295878,51292344,51288188,51284787,51281528 Gene ID= ENSG00000110934.10 TPM= 8.15 Transcript Type= protein_coding chr12 51328440 51346804 51328440 51346804 - transcript1710.chr12.nnic@CELA1 transcript1710.chr12.nnic protein_coding 51346583,51345795,51343753,51342575,51341244,51339860,51329684,51328440 51346804,51345877,51343853,51342700,51341380,51340005,51329833,51328594 Gene ID= ENSG00000139610.1 TPM= 3.62 Transcript Type= NA chr12 51424771 51515763 51424771 51515763 + ENST00000453097.6@SLC4A8 ENST00000453097.6 protein_coding 51424771,51440708,51450876,51452124,51453539,51457351,51458559,51459951,51461204,51462310,51463614,51469614,51470392,51471287,51474342,51475045,51485787,51488699,51489700,51493704,51494945,51496987,51504029,51505835,51507426 51425035,51440789,51451022,51452259,51453699,51457539,51458650,51460108,51461291,51462456,51463714,51469788,51470525,51471532,51474447,51475206,51485900,51488860,51489951,51493772,51495118,51497124,51504120,51505930,51515763 Gene ID= ENSG00000050438.16 TPM= 1.81 Transcript Type= protein_coding chr12 51424771 51480604 51424771 51480604 + transcript1717.chr12.nic@SLC4A8 transcript1717.chr12.nic protein_coding 51424771,51440708,51450876,51452124,51453539,51457351,51458559,51459951,51461204,51462310,51463614,51469614,51470392,51471287,51474342,51475045,51479992 51425035,51440789,51451022,51452259,51453699,51457539,51458650,51460108,51461291,51462456,51463714,51469788,51470525,51471532,51474447,51475206,51480604 Gene ID= ENSG00000050438.16 TPM= 3.62 Transcript Type= NA chr12 51450641 51480604 51450641 51480604 + transcript1720.chr12.nic@SLC4A8 transcript1720.chr12.nic protein_coding 51450641,51452124,51453539,51457351,51458559,51459951,51461204,51462310,51463614,51469614,51470392,51471287,51474342,51475045,51479992 51451022,51452259,51453699,51457539,51458650,51460108,51461291,51462456,51463714,51469788,51470525,51471532,51474447,51475206,51480604 Gene ID= ENSG00000050438.16 TPM= 1.81 Transcript Type= NA chr12 51906942 51923360 51906942 51923360 + transcript1721.chr12.nic@ACVRL1 transcript1721.chr12.nic protein_coding 51906942,51907497,51912470,51913099,51913559,51913974,51914439,51915225,51916036,51918985,51920759 51906993,51907695,51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919115,51923360 Gene ID= ENSG00000139567.12 TPM= 21.28 Transcript Type= NA chr12 51912332 51923359 51912332 51923359 + ENST00000550683.5@ACVRL1 ENST00000550683.5 protein_coding 51912332,51913099,51913559,51913974,51914439,51915225,51916036,51918985,51920759 51912535,51913350,51913770,51914073,51914585,51915500,51916233,51919115,51923359 Gene ID= ENSG00000139567.12 TPM= 13.13 Transcript Type= protein_coding chr12 52006940 52015864 52006940 52015864 + ENST00000293662.8@GRASP ENST00000293662.8 protein_coding 52006940,52009190,52010881,52011039,52013687,52013877,52014135,52014694 52007265,52009239,52010935,52011141,52013780,52013943,52014201,52015864 Gene ID= ENSG00000161835.10 TPM= 49.8 Transcript Type= protein_coding chr12 52037143 52059508 52037143 52059508 + transcript1736.chr12.nic@NR4A1 transcript1736.chr12.nic protein_coding 52037143,52041810,52054327,52056030,52056494,52057057,52057352,52058688 52037443,52041929,52055204,52056159,52056645,52057259,52057530,52059508 Gene ID= ENSG00000123358.19 TPM= 29.45 Transcript Type= NA chr12 52051379 52059508 52051379 52059508 + transcript1769.chr12.nic@NR4A1 transcript1769.chr12.nic protein_coding 52051379,52054327,52057352,52058688 52051568,52057259,52057530,52059508 Gene ID= ENSG00000123358.19 TPM= 19.13 Transcript Type= NA chr12 52051402 52059506 52051402 52059506 + ENST00000394825.5@NR4A1 ENST00000394825.5 protein_coding 52051402,52054327,52056030,52056494,52057057,52057352,52058688 52051568,52055204,52056159,52056645,52057259,52057530,52059506 Gene ID= ENSG00000123358.19 TPM= 491.43 Transcript Type= protein_coding chr12 52051402 52059506 52051402 52059506 + ENST00000243050.5@NR4A1 ENST00000243050.5 protein_coding 52051402,52052496,52054327,52056030,52056494,52057057,52057352,52058688 52051568,52052645,52055204,52056159,52056645,52057259,52057530,52059506 Gene ID= ENSG00000123358.19 TPM= 29.9 Transcript Type= protein_coding chr12 52069971 52077494 52069971 52077494 + ENST00000336854.8@ATG101 ENST00000336854.8 protein_coding 52069971,52070354,52073575,52076786 52070242,52070483,52073902,52077494 Gene ID= ENSG00000123395.14 TPM= 85.12 Transcript Type= protein_coding chr12 52168997 52172516 52168997 52172516 - transcript1781.chr12.nic@KRT80 transcript1781.chr12.nic protein_coding 52172198,52171658,52168997 52172516,52171713,52171522 Gene ID= ENSG00000167767.13 TPM= 3.62 Transcript Type= NA chr12 52168997 52172516 52168997 52172516 - transcript1782.chr12.nic@KRT80 transcript1782.chr12.nic protein_coding 52172198,52171658,52168997 52172516,52171713,52171557 Gene ID= ENSG00000167767.13 TPM= 2.72 Transcript Type= NA chr12 52168996 52192000 52168996 52192000 - ENST00000313234.9@KRT80 ENST00000313234.9 protein_coding 52191603,52185379,52180903,52180513,52173600,52173038,52172198,52171658,52168996 52192000,52185587,52180963,52180608,52173764,52173163,52172418,52171713,52171557 Gene ID= ENSG00000167767.13 TPM= 6.34 Transcript Type= protein_coding chr12 52168996 52192000 52168996 52192000 - ENST00000394815.2@KRT80 ENST00000394815.2 protein_coding 52191603,52185379,52180903,52180513,52173600,52173038,52172198,52171658,52168996 52192000,52185587,52180963,52180608,52173764,52173163,52172418,52171713,52171522 Gene ID= ENSG00000167767.13 TPM= 5.43 Transcript Type= protein_coding chr12 52244289 52248922 52244289 52248922 + transcript1783.chr12.nnic@KRT7 transcript1783.chr12.nnic protein_coding 52244289,52245412,52248177,52248591 52244394,52245632,52248211,52248922 Gene ID= ENSG00000135480.15 TPM= 10.26 Transcript Type= NA chr12 52244290 52248922 52244290 52248922 + transcript1784.chr12.nnic@KRT7 transcript1784.chr12.nnic protein_coding 52244290,52245412,52248177,52248591 52244611,52245632,52248211,52248922 Gene ID= ENSG00000135480.15 TPM= 3.62 Transcript Type= NA chr12 52247658 52248921 52247658 52248921 + ENST00000550153.1@KRT7 ENST00000550153.1 protein_coding 52247658,52248177,52248591 52247790,52248211,52248921 Gene ID= ENSG00000135480.15 TPM= 2.11 Transcript Type= processed_transcript chr12 52247918 52248925 52247918 52248925 + ENST00000549638.1@KRT7 ENST00000549638.1 protein_coding 52247918,52248591 52248211,52248925 Gene ID= ENSG00000135480.15 TPM= 1.2 Transcript Type= retained_intron chr12 52897186 52949929 52897186 52949929 - transcript1793.chr12.nic@KRT8 transcript1793.chr12.nic protein_coding 52949715,52949456,52904658,52901864,52901159,52900588,52899775,52898679,52898461,52897186 52949929,52949517,52905027,52902072,52901219,52900683,52900065,52898899,52898519,52897618 Gene ID= ENSG00000170421.12 TPM= 7.24 Transcript Type= NA chr12 52897186 52905285 52897186 52905285 - transcript1801.chr12.nic@KRT8 transcript1801.chr12.nic protein_coding 52904658,52901864,52901159,52900588,52899775,52898679,52898461,52897186 52905285,52902072,52901219,52900683,52900065,52898899,52898519,52897618 Gene ID= ENSG00000170421.12 TPM= 200.13 Transcript Type= NA chr12 52897187 52949842 52897187 52949842 - ENST00000552551.5@KRT8 ENST00000552551.5 protein_coding 52949456,52904658,52901864,52901159,52900588,52899775,52898679,52898461,52897187 52949842,52905027,52902072,52901219,52900683,52900065,52898899,52898519,52897618 Gene ID= ENSG00000170421.12 TPM= 8.15 Transcript Type= protein_coding chr12 52948871 52952900 52948871 52952900 + ENST00000388837.6@KRT18 ENST00000388837.6 protein_coding 52948871,52949173,52950328,52950750,52951481,52951731,52952119,52952722 52948938,52949590,52950410,52950906,52951645,52951856,52952342,52952900 Gene ID= ENSG00000111057.10 TPM= 4.53 Transcript Type= protein_coding chr12 52948964 52952901 52948964 52952901 + ENST00000388835.3@KRT18 ENST00000388835.3 protein_coding 52948964,52950328,52950750,52951481,52951731,52952119,52952722 52949590,52950410,52950906,52951645,52951856,52952342,52952901 Gene ID= ENSG00000111057.10 TPM= 186.54 Transcript Type= protein_coding chr12 53006158 53042209 53006158 53042209 + ENST00000262056.13@EIF4B ENST00000262056.13 protein_coding 53006158,53016473,53018798,53019910,53021806,53022493,53027782,53028015,53033806,53034612,53037409,53038356,53039238,53039630,53040143 53006496,53016610,53019006,53020026,53021860,53022627,53027919,53028188,53034034,53034709,53037622,53038411,53039343,53039702,53042209 Gene ID= ENSG00000063046.17 TPM= 364.03 Transcript Type= protein_coding chr12 53038968 53054448 53038968 53054448 - transcript1842.chr12.nnic@AC068888.1 transcript1842.chr12.nnic antisense_RNA 53054321,53053396,53045961,53045600,53045065,53038968 53054448,53053574,53046061,53045653,53045186,53040263 Gene ID= ENSG00000257337.6 TPM= 1.81 Transcript Type= NA chr12 53038964 53054448 53038964 53054448 - transcript1844.chr12.nic@AC068888.1 transcript1844.chr12.nic antisense_RNA 53054321,53053396,53045961,53045600,53038964 53054448,53053574,53046061,53045653,53040263 Gene ID= ENSG00000257337.6 TPM= 1.81 Transcript Type= NA chr12 53038955 53054448 53038955 53054448 - transcript1847.chr12.nic@AC068888.1 transcript1847.chr12.nic antisense_RNA 53054321,53053396,53045961,53038955 53054448,53053574,53046061,53040263 Gene ID= ENSG00000257337.6 TPM= 6.34 Transcript Type= NA chr12 53038955 53047064 53038955 53047064 - transcript1854.chr12.nic@AC068888.1 transcript1854.chr12.nic antisense_RNA 53046853,53045961,53038955 53047064,53046061,53040263 Gene ID= ENSG00000257337.6 TPM= 3.62 Transcript Type= NA chr12 53038968 53054448 53038968 53054448 - transcript1858.chr12.nnic@AC068888.1 transcript1858.chr12.nnic antisense_RNA 53054321,53053396,53038968 53054448,53053574,53040263 Gene ID= ENSG00000257337.6 TPM= 1.81 Transcript Type= NA chr12 53043189 53047304 53043189 53047304 - transcript1859.chr12.nic@AC068888.1 transcript1859.chr12.nic antisense_RNA 53046853,53045961,53043189 53047304,53046061,53045653 Gene ID= ENSG00000257337.6 TPM= 6.34 Transcript Type= NA chr12 53038967 53047050 53038967 53047050 - ENST00000546566.5@AC068888.1 ENST00000546566.5 antisense_RNA 53046853,53045961,53045600,53038967 53047050,53046061,53045653,53040263 Gene ID= ENSG00000257337.6 TPM= 1.81 Transcript Type= antisense_RNA chr12 53043189 53054438 53043189 53054438 - ENST00000546793.1@AC068888.1 ENST00000546793.1 antisense_RNA 53054321,53053396,53045961,53043189 53054438,53053574,53046061,53045653 Gene ID= ENSG00000257337.6 TPM= 3.62 Transcript Type= antisense_RNA chr12 53047205 53064376 53047205 53064376 + transcript1813.chr12.nnic@TNS2 transcript1813.chr12.nnic protein_coding 53047205,53051855,53052455,53053411,53053774,53053965,53054270,53055186,53055568,53055781,53057013,53057567,53057773,53058027,53058316,53058572,53058714,53059047,53060405,53060675,53061380,53061815,53062153,53062376,53062620,53063089,53063349,53063563,53063744 53047373,53051963,53052492,53053449,53053812,53054014,53054441,53055236,53055690,53055845,53057096,53057679,53057833,53058102,53058445,53058637,53058827,53060258,53060555,53061264,53061469,53061940,53062245,53062453,53062697,53063257,53063417,53063592,53064376 Gene ID= ENSG00000111077.17 TPM= 28.98 Transcript Type= NA chr12 53049896 53064372 53049896 53064372 + ENST00000314250.10@TNS2 ENST00000314250.10 protein_coding 53049896,53051855,53052455,53053411,53053774,53053965,53054270,53055186,53055568,53055781,53057013,53057567,53057773,53058027,53058316,53058572,53058714,53059047,53060405,53060675,53061380,53061815,53062153,53062376,53062620,53063089,53063349,53063563,53063744 53050260,53051963,53052492,53053449,53053812,53054014,53054441,53055236,53055690,53055845,53057096,53057679,53057833,53058102,53058445,53058637,53058827,53060258,53060555,53061264,53061469,53061940,53062245,53062453,53062697,53063257,53063417,53063592,53064372 Gene ID= ENSG00000111077.17 TPM= 28.07 Transcript Type= protein_coding chr12 53064316 53079420 53064316 53079420 - ENST00000301463.8@SPRYD3 ENST00000301463.8 protein_coding 53079311,53077115,53075736,53075095,53074649,53073286,53068155,53067648,53066573,53066314,53064316 53079420,53077261,53075811,53075219,53074784,53073471,53068304,53067705,53066692,53066486,53065966 Gene ID= ENSG00000167778.8 TPM= 170.24 Transcript Type= protein_coding chr12 53097445 53102340 53097445 53102340 + ENST00000301464.3@IGFBP6 ENST00000301464.3 protein_coding 53097445,53100712,53101041,53102045 53098051,53100857,53101160,53102340 Gene ID= ENSG00000167779.7 TPM= 173.86 Transcript Type= protein_coding chr12 53157664 53180622 53157664 53180622 - transcript1869.chr12.nic@CSAD transcript1869.chr12.nic protein_coding 53179777,53173728,53173345,53172522,53172346,53171882,53171326,53170423,53170072,53161273,53161127,53160763,53160120,53159887,53159623,53157664 53180622,53173770,53173476,53172648,53172436,53171988,53171441,53170502,53170126,53161389,53161191,53160844,53160319,53159938,53159712,53158684 Gene ID= ENSG00000139631.18 TPM= 2.72 Transcript Type= NA chr12 53180704 53190794 53180704 53190794 + transcript1873.chr12.nnic@ZNF740 transcript1873.chr12.nnic protein_coding 53180704,53181677,53184891,53185387,53185954,53186391,53187501,53190718 53180837,53181992,53185040,53185476,53186077,53186509,53187947,53190794 Gene ID= ENSG00000139651.10 TPM= 2.72 Transcript Type= NA chr12 53191318 53207307 53191318 53207307 - ENST00000267082.9@ITGB7 ENST00000267082.9 protein_coding 53207202,53201072,53200243,53197750,53197493,53196579,53196041,53195626,53195374,53194198,53193708,53193140,53192691,53192330,53191859,53191318 53207307,53201194,53200446,53197951,53197663,53196820,53196199,53195721,53195463,53194344,53193901,53193363,53192910,53192538,53192019,53191636 Gene ID= ENSG00000139626.15 TPM= 1.81 Transcript Type= protein_coding chr12 53191321 53197741 53191321 53197741 - transcript1878.chr12.nic@ITGB7 transcript1878.chr12.nic protein_coding 53197493,53196579,53196041,53195626,53195374,53194198,53193708,53193140,53192691,53192330,53191859,53191321 53197741,53196820,53196199,53195721,53195463,53194344,53193901,53193363,53192910,53192538,53192019,53191636 Gene ID= ENSG00000139626.15 TPM= 7.24 Transcript Type= NA chr12 53210570 53232252 53210570 53232252 - ENST00000425354.6@RARG ENST00000425354.6 protein_coding 53231974,53231169,53227362,53215646,53215293,53214446,53214059,53213496,53213085,53210570 53232252,53231235,53227687,53215794,53215434,53214606,53214235,53213700,53213243,53211863 Gene ID= ENSG00000172819.16 TPM= 24.9 Transcript Type= protein_coding chr12 53210567 53232256 53210567 53232256 - ENST00000394426.5@RARG ENST00000394426.5 protein_coding 53231974,53231169,53215646,53215293,53214446,53214059,53213496,53213085,53210567 53232256,53231235,53215794,53215434,53214606,53214235,53213700,53213243,53211863 Gene ID= ENSG00000172819.16 TPM= 4.07 Transcript Type= protein_coding chr12 53251212 53254406 53251212 53254406 + transcript1890.chr12.nic@MFSD5 transcript1890.chr12.nic protein_coding 53251212,53251705,53252818 53251624,53252035,53254406 Gene ID= ENSG00000182544.8 TPM= 7.7 Transcript Type= NA chr12 53252096 53254404 53252096 53254404 + ENST00000329548.4@MFSD5 ENST00000329548.4 protein_coding 53252096,53252818 53252268,53254404 Gene ID= ENSG00000182544.8 TPM= 45.73 Transcript Type= protein_coding chr12 53268299 53293643 53268299 53293643 + ENST00000257934.8@ESPL1 ENST00000257934.8 protein_coding 53268299,53268755,53269024,53270378,53270678,53272721,53274817,53276620,53277083,53277470,53277821,53279732,53281507,53282264,53283129,53283382,53284058,53285924,53287972,53288538,53289090,53289404,53290085,53290347,53290841,53291690,53291984,53292278,53292574,53292806,53293273 53268377,53268847,53270085,53270482,53270798,53272857,53275010,53276859,53277227,53277608,53277960,53279866,53281626,53282435,53283257,53283538,53284167,53286912,53288341,53288699,53289303,53289594,53290212,53290469,53290996,53291860,53292088,53292393,53292657,53292970,53293643 Gene ID= ENSG00000135476.11 TPM= 1.81 Transcript Type= protein_coding chr12 53295525 53299450 53295525 53299450 + ENST00000351500.7@PFDN5 ENST00000351500.7 protein_coding 53295525,53297850,53298045,53299269 53295639,53297924,53298150,53299450 Gene ID= ENSG00000123349.13 TPM= 32.3 Transcript Type= protein_coding chr12 53295542 53299450 53295542 53299450 + ENST00000243040.10@PFDN5 ENST00000243040.10 protein_coding 53295542,53295839,53297850,53298045,53299269 53295639,53295941,53297924,53298150,53299450 Gene ID= ENSG00000123349.13 TPM= 5.13 Transcript Type= nonsense_mediated_decay chr12 53295525 53299445 53295525 53299445 + ENST00000550880.5@PFDN5 ENST00000550880.5 protein_coding 53295525,53296430,53297850,53298045,53299269 53295639,53296551,53297924,53298150,53299445 Gene ID= ENSG00000123349.13 TPM= 3.32 Transcript Type= nonsense_mediated_decay chr12 53299718 53307171 53299718 53307171 + ENST00000548845.5@C12orf10 ENST00000548845.5 protein_coding 53299718,53303034,53305908,53306198,53306680,53306966 53300262,53303193,53306060,53306320,53306861,53307171 Gene ID= ENSG00000139637.13 TPM= 15.39 Transcript Type= retained_intron chr12 53299686 53307158 53299686 53307158 + ENST00000267103.9@C12orf10 ENST00000267103.9 protein_coding 53299686,53300150,53303034,53305908,53306198,53306680,53306966 53299953,53300262,53303193,53306060,53306320,53306861,53307158 Gene ID= ENSG00000139637.13 TPM= 75.16 Transcript Type= protein_coding chr12 53307456 53321631 53307456 53321631 - ENST00000209873.8@AAAS ENST00000209873.8 protein_coding 53321343,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307456 53321631,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713 Gene ID= ENSG00000094914.12 TPM= 41.5 Transcript Type= protein_coding chr12 53307453 53321599 53307453 53321599 - transcript1906.chr12.nic@AAAS transcript1906.chr12.nic protein_coding 53321471,53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307453 53321599,53320692,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713 Gene ID= ENSG00000094914.12 TPM= 8.9 Transcript Type= NA chr12 53307453 53321594 53307453 53321594 - transcript1912.chr12.nic@AAAS transcript1912.chr12.nic protein_coding 53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307453 53321594,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713 Gene ID= ENSG00000094914.12 TPM= 36.97 Transcript Type= NA chr12 53307453 53321305 53307453 53321305 - transcript1916.chr12.nnic@AAAS transcript1916.chr12.nnic protein_coding 53320565,53315727,53315335,53315094,53314751,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307453 53321305,53315782,53315426,53315140,53314849,53314441,53309721,53309281,53309020,53308851,53308528,53308349,53308133,53307929,53307713 Gene ID= ENSG00000094914.12 TPM= 4.37 Transcript Type= NA chr12 53307459 53321596 53307459 53321596 - ENST00000394384.7@AAAS ENST00000394384.7 protein_coding 53321343,53320565,53315727,53315335,53315094,53314298,53309601,53309157,53308960,53308725,53308435,53308282,53308052,53307845,53307459 53321596,53320692,53315782,53315426,53315140,53314441,53309721,53309281,53309020,53308815,53308528,53308349,53308133,53307929,53307713 Gene ID= ENSG00000094914.12 TPM= 1.66 Transcript Type= protein_coding chr12 53380819 53413255 53380819 53413255 + transcript1926.chr12.nnic@SP1 transcript1926.chr12.nnic protein_coding 53380819,53381661,53382252,53406585,53409362,53410923 53381097,53381811,53383622,53406753,53409561,53413255 Gene ID= ENSG00000185591.9 TPM= 3.17 Transcript Type= NA chr12 53380968 53412080 53380968 53412080 + transcript1935.chr12.nnic@SP1 transcript1935.chr12.nnic protein_coding 53380968,53382107,53406585,53409362,53410923 53381813,53383622,53406753,53409561,53412080 Gene ID= ENSG00000185591.9 TPM= 16.75 Transcript Type= NA chr12 53425055 53431531 53425055 53431531 + transcript1938.chr12.nic@AMHR2 transcript1938.chr12.nic protein_coding 53425055,53425455,53425689,53428896,53429453,53429831,53430146,53431177 53425164,53425487,53425919,53429010,53429625,53429978,53430282,53431531 Gene ID= ENSG00000135409.10 TPM= 30.82 Transcript Type= NA chr12 53425055 53431526 53425055 53431526 + transcript1941.chr12.nnic@AMHR2 transcript1941.chr12.nnic protein_coding 53425055,53425455,53425819,53428896,53429453,53429831,53430146,53431177 53425164,53425487,53425919,53429010,53429625,53429978,53430282,53431526 Gene ID= ENSG00000135409.10 TPM= 2.74 Transcript Type= NA chr12 53425055 53431671 53425055 53431671 + transcript1942.chr12.nic@AMHR2 transcript1942.chr12.nic protein_coding 53425055,53425455,53425689,53428896,53429453,53429831,53430146,53431177 53425164,53425573,53425919,53429010,53429625,53429978,53430282,53431671 Gene ID= ENSG00000135409.10 TPM= 11.8 Transcript Type= NA chr12 53425055 53431528 53425055 53431528 + transcript1945.chr12.nnic@AMHR2 transcript1945.chr12.nnic protein_coding 53425055,53425455,53425689,53428896,53429453,53430146,53431177 53425164,53425487,53425919,53429010,53429625,53430282,53431528 Gene ID= ENSG00000135409.10 TPM= 3.2 Transcript Type= NA chr12 53425055 53431526 53425055 53431526 + transcript1949.chr12.nic@AMHR2 transcript1949.chr12.nic protein_coding 53425055,53425455,53428896,53429453,53429831,53430146,53431177 53425164,53425919,53429010,53429625,53429978,53430282,53431526 Gene ID= ENSG00000135409.10 TPM= 2.44 Transcript Type= NA chr12 53425055 53431534 53425055 53431534 + transcript1950.chr12.nic@AMHR2 transcript1950.chr12.nic protein_coding 53425055,53425455,53425689,53428896,53429453,53431177 53425164,53425487,53425919,53429010,53429625,53431534 Gene ID= ENSG00000135409.10 TPM= 9.35 Transcript Type= NA chr12 53425055 53431526 53425055 53431526 + transcript1953.chr12.nnic@AMHR2 transcript1953.chr12.nnic protein_coding 53425055,53425455,53425819,53428896,53429453,53431177 53425164,53425487,53425919,53429010,53429625,53431526 Gene ID= ENSG00000135409.10 TPM= 3.02 Transcript Type= NA chr12 53425055 53431526 53425055 53431526 + transcript1954.chr12.nic@AMHR2 transcript1954.chr12.nic protein_coding 53425055,53425455,53425689,53428896,53429453,53431177 53425164,53425573,53425919,53429010,53429625,53431526 Gene ID= ENSG00000135409.10 TPM= 3.92 Transcript Type= NA chr12 53425055 53431671 53425055 53431671 + transcript1957.chr12.nic@AMHR2 transcript1957.chr12.nic protein_coding 53425055,53425455,53428896,53429453,53431177 53425164,53425919,53429010,53429625,53431671 Gene ID= ENSG00000135409.10 TPM= 2.11 Transcript Type= NA chr12 53441762 53446638 53441762 53446638 + ENST00000379786.8@PRR13 ENST00000379786.8 protein_coding 53441762,53442695,53443541,53446015 53441792,53442733,53443773,53446638 Gene ID= ENSG00000205352.10 TPM= 8.15 Transcript Type= protein_coding chr12 53441732 53446636 53441732 53446636 + ENST00000551003.5@PRR13 ENST00000551003.5 protein_coding 53441732,53442695,53443487,53446015 53441792,53442733,53443773,53446636 Gene ID= ENSG00000205352.10 TPM= 7.24 Transcript Type= protein_coding chr12 53452275 53481160 53452275 53481160 + transcript1965.chr12.nic@PCBP2 transcript1965.chr12.nic protein_coding 53452275,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53464760,53465932,53467221,53468777,53471638,53479406 53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53464852,53465973,53467293,53468832,53471807,53481160 Gene ID= ENSG00000197111.15 TPM= 22.71 Transcript Type= NA chr12 53452102 53481161 53452102 53481161 + ENST00000447282.5@PCBP2 ENST00000447282.5 protein_coding 53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462481,53465932,53467221,53467805,53468777,53471638,53479406 53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53467843,53468832,53471807,53481161 Gene ID= ENSG00000197111.15 TPM= 17.88 Transcript Type= protein_coding chr12 53452102 53481161 53452102 53481161 + ENST00000437231.5@PCBP2 ENST00000437231.5 protein_coding 53452102,53454726,53455347,53455461,53455885,53459272,53461015,53462493,53465932,53467221,53468777,53471638,53479406 53452376,53454869,53455370,53455493,53456001,53459403,53461143,53462567,53465973,53467293,53468832,53471807,53481161 Gene ID= ENSG00000197111.15 TPM= 29.05 Transcript Type= protein_coding chr12 53500872 53506435 53500872 53506435 + transcript1992.chr12.nic@TARBP2 transcript1992.chr12.nic protein_coding 53500872,53502015,53503027,53503713,53504397,53504612,53505135,53505649,53505991 53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506435 Gene ID= ENSG00000139546.10 TPM= 4.23 Transcript Type= NA chr12 53500309 53506435 53500309 53506435 + transcript1996.chr12.nic@TARBP2 transcript1996.chr12.nic protein_coding 53500309,53502015,53503027,53504397,53504698,53505135,53505649,53505991 53501461,53502184,53503808,53504469,53504815,53505262,53505850,53506435 Gene ID= ENSG00000139546.10 TPM= 3.62 Transcript Type= NA chr12 53501586 53506435 53501586 53506435 + transcript1999.chr12.nic@TARBP2 transcript1999.chr12.nic protein_coding 53501586,53502015,53503027,53504397,53504698,53505135,53505649,53505991 53501708,53502184,53503808,53504469,53504815,53505262,53505850,53506435 Gene ID= ENSG00000139546.10 TPM= 3.32 Transcript Type= NA chr12 53501046 53506435 53501046 53506435 + transcript2000.chr12.nic@TARBP2 transcript2000.chr12.nic protein_coding 53501046,53502015,53503027,53504612,53505135,53505649,53505991 53501461,53502184,53504469,53504815,53505262,53505850,53506435 Gene ID= ENSG00000139546.10 TPM= 2.72 Transcript Type= NA chr12 53500931 53506435 53500931 53506435 + transcript2001.chr12.nic@TARBP2 transcript2001.chr12.nic protein_coding 53500931,53502015,53503027,53504698,53505135,53505649,53505991 53501461,53502184,53504469,53504815,53505262,53505850,53506435 Gene ID= ENSG00000139546.10 TPM= 2.72 Transcript Type= NA chr12 53500926 53506431 53500926 53506431 + ENST00000266987.6@TARBP2 ENST00000266987.6 protein_coding 53500926,53502015,53503027,53503713,53504397,53504698,53505135,53505649,53505991 53501461,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506431 Gene ID= ENSG00000139546.10 TPM= 20.53 Transcript Type= protein_coding chr12 53501619 53506412 53501619 53506412 + ENST00000394357.6@TARBP2 ENST00000394357.6 protein_coding 53501619,53502015,53503027,53503713,53504397,53504698,53505135,53505649,53505991 53501708,53502184,53503129,53503808,53504469,53504815,53505262,53505850,53506412 Gene ID= ENSG00000139546.10 TPM= 3.62 Transcript Type= protein_coding chr12 53542887 53625996 53542887 53625996 - ENST00000548118.6@ATF7 ENST00000548118.6 protein_coding 53625951,53600953,53552541,53542887 53625996,53601021,53552637,53543448 Gene ID= ENSG00000170653.18 TPM= 1.81 Transcript Type= protein_coding chr12 53542887 53626410 53542887 53626410 - ENST00000591397.1@ATF7 ENST00000591397.1 protein_coding 53626279,53600953,53552541,53542887 53626410,53601021,53552637,53543448 Gene ID= ENSG00000170653.18 TPM= 1.81 Transcript Type= protein_coding chr12 53711107 53727452 53711107 53727452 - transcript2009.chr12.nic@CALCOCO1 transcript2009.chr12.nic protein_coding 53727404,53725690,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53711107 53727452,53725759,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206,53712121 Gene ID= ENSG00000012822.15 TPM= 14.52 Transcript Type= NA chr12 53708517 53727745 53708517 53727745 - ENST00000262059.8@CALCOCO1 ENST00000262059.8 protein_coding 53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53713100,53708517 53727745,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713203,53712121 Gene ID= ENSG00000012822.15 TPM= 2.9 Transcript Type= protein_coding chr12 53711107 53727452 53711107 53727452 - transcript2018.chr12.nic@CALCOCO1 transcript2018.chr12.nic protein_coding 53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53713701,53713100,53711107 53727452,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713206,53712121 Gene ID= ENSG00000012822.15 TPM= 9.26 Transcript Type= NA chr12 53711118 53727456 53711118 53727456 - transcript2021.chr12.nic@CALCOCO1 transcript2021.chr12.nic protein_coding 53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53713701,53711118 53727456,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713206 Gene ID= ENSG00000012822.15 TPM= 18.32 Transcript Type= NA chr12 53711118 53727460 53711118 53727460 - transcript2023.chr12.nic@CALCOCO1 transcript2023.chr12.nic protein_coding 53727404,53725087,53724645,53723593,53722025,53721467,53719739,53715793,53715200,53714598,53713701,53711118 53727460,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53715325,53714693,53714241,53713206 Gene ID= ENSG00000012822.15 TPM= 7.45 Transcript Type= NA chr12 53711159 53727428 53711159 53727428 - ENST00000548263.5@CALCOCO1 ENST00000548263.5 protein_coding 53727404,53725087,53724645,53723593,53722025,53721467,53719739,53716260,53715793,53715200,53714598,53714133,53713701,53711159 53727428,53725266,53724747,53723783,53722183,53721615,53719829,53716415,53716047,53715325,53714693,53714241,53713900,53713206 Gene ID= ENSG00000012822.15 TPM= 5.28 Transcript Type= protein_coding chr12 54028358 54030823 54028358 54030823 + ENST00000243108.4@HOXC6 ENST00000243108.4 protein_coding 54028358,54029655 54028921,54030823 Gene ID= ENSG00000197757.7 TPM= 4.53 Transcript Type= protein_coding chr12 54053877 54056030 54053877 54056030 + ENST00000430889.2@HOXC4 ENST00000430889.2 protein_coding 54053877,54054850 54054361,54056030 Gene ID= ENSG00000198353.7 TPM= 1.81 Transcript Type= protein_coding chr12 54126098 54132843 54126098 54132843 + ENST00000508564.1@LINC02381 ENST00000508564.1 lincRNA 54126098,54131990 54126612,54132843 Gene ID= ENSG00000250742.2 TPM= 23.54 Transcript Type= lincRNA chr12 54181457 54188986 54181457 54188986 - transcript2046.chr12.nic@SMUG1 transcript2046.chr12.nic protein_coding 54188951,54188515,54183656,54182504,54181457 54188986,54188596,54183959,54182623,54181647 Gene ID= ENSG00000123415.15 TPM= 7.7 Transcript Type= NA chr12 54180369 54187908 54180369 54187908 - transcript2048.chr12.nnic@SMUG1 transcript2048.chr12.nnic protein_coding 54187819,54187046,54183656,54180369 54187908,54187295,54183959,54182623 Gene ID= ENSG00000123415.15 TPM= 17.21 Transcript Type= NA chr12 54181471 54188976 54181471 54188976 - ENST00000243112.9@SMUG1 ENST00000243112.9 protein_coding 54188951,54183656,54182504,54181471 54188976,54183959,54182623,54181647 Gene ID= ENSG00000123415.15 TPM= 7.7 Transcript Type= protein_coding chr12 54280193 54287087 54280193 54287087 + ENST00000546500.5@HNRNPA1 ENST00000546500.5 protein_coding 54280193,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54284549 54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54287087 Gene ID= ENSG00000135486.17 TPM= 483.11 Transcript Type= protein_coding chr12 54280748 54287088 54280748 54287088 + ENST00000547566.5@HNRNPA1 ENST00000547566.5 protein_coding 54280748,54281386,54281795,54282090,54282394,54282573,54282800,54283812,54284258,54286662,54286953 54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283967,54284317,54286732,54287088 Gene ID= ENSG00000135486.17 TPM= 31.69 Transcript Type= nonsense_mediated_decay chr12 54280755 54285214 54280755 54285214 + ENST00000340913.10@HNRNPA1 ENST00000340913.10 protein_coding 54280755,54281386,54281795,54282090,54282394,54282573,54282800,54283079,54283812,54284258,54284549 54280822,54281502,54281941,54282300,54282486,54282665,54282874,54283234,54283967,54284317,54285214 Gene ID= ENSG00000135486.17 TPM= 36.67 Transcript Type= protein_coding chr12 54325127 54351849 54325127 54351849 + ENST00000262061.6@COPZ1 ENST00000262061.6 protein_coding 54325127,54340547,54342206,54343225,54345460,54347767,54348000,54349620,54350476 54325181,54340615,54342287,54343316,54345515,54347844,54348051,54349658,54351849 Gene ID= ENSG00000111481.9 TPM= 146.25 Transcript Type= protein_coding chr12 54325139 54350913 54325139 54350913 + ENST00000455864.6@COPZ1 ENST00000455864.6 protein_coding 54325139,54342206,54343225,54345460,54347767,54348000,54349620,54350476 54325181,54342287,54343316,54345515,54347844,54348051,54349658,54350913 Gene ID= ENSG00000111481.9 TPM= 1.36 Transcript Type= protein_coding chr12 54362445 54364474 54362445 54364474 - ENST00000267015.3@GPR84 ENST00000267015.3 protein_coding 54364393,54362445 54364474,54363859 Gene ID= ENSG00000139572.3 TPM= 1.81 Transcript Type= protein_coding chr12 54369136 54384723 54369136 54384723 - ENST00000394313.6@ZNF385A ENST00000394313.6 protein_coding 54384428,54375844,54373973,54371473,54370927,54370626,54369136 54384723,54375954,54374135,54371715,54371096,54370721,54370486 Gene ID= ENSG00000161642.17 TPM= 2.94 Transcript Type= protein_coding chr12 54369133 54385767 54369133 54385767 - ENST00000551109.5@ZNF385A ENST00000551109.5 protein_coding 54385673,54384428,54375844,54373973,54371473,54370927,54370626,54369133 54385767,54384564,54375954,54374135,54371715,54371096,54370721,54370486 Gene ID= ENSG00000161642.17 TPM= 3.85 Transcript Type= protein_coding chr12 54369140 54391298 54369140 54391298 - ENST00000338010.9@ZNF385A ENST00000338010.9 protein_coding 54391235,54384428,54375844,54373973,54371473,54370927,54370626,54369140 54391298,54384564,54375954,54374135,54371715,54371096,54370721,54370486 Gene ID= ENSG00000161642.17 TPM= 2.04 Transcript Type= protein_coding chr12 54369153 54385768 54369153 54385768 - ENST00000546970.5@ZNF385A ENST00000546970.5 protein_coding 54385673,54384859,54384428,54375844,54373973,54371473,54370927,54370626,54369153 54385768,54385002,54384564,54375954,54374135,54371715,54371096,54370721,54370486 Gene ID= ENSG00000161642.17 TPM= 1.13 Transcript Type= protein_coding chr12 54395261 54419460 54395261 54419460 - ENST00000293379.8@ITGA5 ENST00000293379.8 protein_coding 54418981,54411834,54409485,54409232,54408893,54408756,54408110,54407832,54407649,54405870,54405664,54405166,54404703,54404430,54404145,54403911,54403625,54403187,54402983,54402180,54402001,54401776,54401585,54401373,54400846,54399864,54399645,54398597,54397365,54395261 54419460,54411964,54409597,54409352,54408954,54408801,54408235,54407876,54407692,54405926,54405716,54405374,54404894,54404475,54404246,54403966,54403779,54403324,54403050,54402330,54402093,54401855,54401665,54401478,54400995,54399947,54399758,54398698,54397487,54396376 Gene ID= ENSG00000161638.10 TPM= 179 Transcript Type= protein_coding chr12 54497711 54548238 54497711 54548238 + ENST00000293373.10@NCKAP1L ENST00000293373.10 protein_coding 54497711,54499355,54500533,54507853,54508389,54509669,54509848,54511803,54511949,54516239,54516896,54517533,54517806,54518651,54518914,54519187,54520694,54521119,54523394,54523825,54526528,54528247,54531260,54531491,54531743,54532170,54535104,54536129,54536944,54538884,54542575 54497891,54499465,54500625,54507909,54508531,54509759,54509985,54511851,54512105,54516295,54516992,54517642,54517938,54518732,54518972,54519332,54520826,54521238,54523539,54523956,54526746,54528377,54531357,54531584,54531825,54532250,54535197,54536245,54537053,54538973,54548238 Gene ID= ENSG00000123338.12 TPM= 3.62 Transcript Type= protein_coding chr12 54579248 54588659 54579248 54588659 - ENST00000257905.12@PPP1R1A ENST00000257905.12 protein_coding 54588405,54584260,54583211,54582732,54581976,54580944,54579248 54588659,54584320,54583248,54582795,54582131,54581050,54580392 Gene ID= ENSG00000135447.16 TPM= 1.81 Transcript Type= protein_coding chr12 55684568 55707701 55684568 55707701 - ENST00000553804.5@ITGA7 ENST00000553804.5 protein_coding 55707477,55703051,55702872,55700899,55700262,55698710,55698383,55697938,55697695,55697451,55697216,55696899,55696283,55695522,55694778,55694615,55694443,55694256,55694021,55693141,55692844,55688844,55688202,55687971,55684568 55707701,55703178,55702951,55701154,55700393,55698917,55698576,55698026,55697822,55697546,55697277,55697068,55696432,55695637,55694970,55694695,55694522,55694330,55694123,55693317,55692975,55688957,55688300,55688096,55685288 Gene ID= ENSG00000135424.15 TPM= 5.43 Transcript Type= protein_coding chr12 55716037 55719703 55716037 55719703 + ENST00000548925.5@BLOC1S1 ENST00000548925.5 protein_coding 55716037,55716933,55719091,55719499 55716196,55717005,55719223,55719703 Gene ID= ENSG00000135441.7 TPM= 153.04 Transcript Type= protein_coding chr12 55725482 55729707 55725482 55729707 - ENST00000549117.5@CD63 ENST00000549117.5 protein_coding 55729282,55728276,55727151,55726890,55726700,55726121,55725813,55725482 55729707,55728352,55727339,55726964,55726795,55726261,55725896,55725626 Gene ID= ENSG00000135404.11 TPM= 17.66 Transcript Type= protein_coding chr12 55725470 55728482 55725470 55728482 - ENST00000552692.5@CD63 ENST00000552692.5 protein_coding 55728276,55727151,55726890,55726700,55726121,55725813,55725470 55728482,55727339,55726964,55726795,55726261,55725896,55725626 Gene ID= ENSG00000135404.11 TPM= 37.13 Transcript Type= protein_coding chr12 55729104 55730852 55729104 55730852 + ENST00000552576.2@AC009779.2 ENST00000552576.2 antisense_RNA 55729104,55729662 55729355,55730852 Gene ID= ENSG00000258056.2 TPM= 7.24 Transcript Type= antisense_RNA chr12 55757291 55817763 55757291 55817763 - transcript2115.chr12.nic@SARNP transcript2115.chr12.nic protein_coding 55817666,55803629,55800562,55796025,55794807,55794359,55790567,55789075,55760551,55757291 55817763,55803728,55800629,55796076,55794880,55794387,55790592,55789143,55760640,55757553 Gene ID= ENSG00000205323.8 TPM= 2.72 Transcript Type= NA chr12 55757274 55817756 55757274 55817756 - ENST00000336133.7@SARNP ENST00000336133.7 protein_coding 55817666,55803629,55800854,55800562,55796025,55794807,55794359,55790567,55789075,55760551,55757274 55817756,55803728,55800900,55800629,55796076,55794880,55794387,55790592,55789143,55760640,55757553 Gene ID= ENSG00000205323.8 TPM= 57.95 Transcript Type= protein_coding chr12 55757294 55817763 55757294 55817763 - transcript2116.chr12.nnic@AC023055.1 transcript2116.chr12.nnic protein_coding 55817666,55803629,55800854,55800562,55796025,55794807,55794359,55790567,55789075,55757294 55817763,55803728,55800900,55800629,55796076,55794880,55794387,55790592,55789143,55757553 Gene ID= ENSG00000257390.5 TPM= 2.72 Transcript Type= NA chr12 55820982 55829589 55820982 55829589 - transcript2119.chr12.nic@DNAJC14 transcript2119.chr12.nic protein_coding 55829141,55827252,55823402,55823070,55822572,55822373,55820982 55829589,55828714,55823508,55823189,55822732,55822475,55822187 Gene ID= ENSG00000135392.15 TPM= 18.56 Transcript Type= NA chr12 55820960 55830781 55820960 55830781 - ENST00000357606.7@DNAJC14 ENST00000357606.7 protein_coding 55830696,55829489,55827252,55823402,55823070,55822572,55822373,55820960 55830781,55829636,55828714,55823508,55823189,55822732,55822475,55822187 Gene ID= ENSG00000135392.15 TPM= 40.3 Transcript Type= protein_coding chr12 55836426 55842922 55836426 55842922 - ENST00000322569.8@MMP19 ENST00000322569.8 protein_coding 55842744,55842353,55841106,55840667,55839496,55838606,55837843,55837555,55836426 55842922,55842438,55841236,55840882,55839741,55838734,55838007,55837682,55837374 Gene ID= ENSG00000123342.15 TPM= 1.81 Transcript Type= protein_coding chr12 55913826 55927875 55913826 55927875 - ENST00000454792.2@PYM1 ENST00000454792.2 protein_coding 55927725,55927076,55913826 55927875,55927267,55914366 Gene ID= ENSG00000170473.16 TPM= 1.36 Transcript Type= protein_coding chr12 55901413 55927913 55901413 55927913 - ENST00000408946.6@PYM1 ENST00000408946.6 protein_coding 55927725,55903387,55901413 55927913,55903480,55902355 Gene ID= ENSG00000170473.16 TPM= 25.81 Transcript Type= protein_coding chr12 55901414 55927112 55901414 55927112 - ENST00000398213.4@PYM1 ENST00000398213.4 protein_coding 55927076,55903387,55901414 55927112,55903480,55902355 Gene ID= ENSG00000170473.16 TPM= 3.62 Transcript Type= protein_coding chr12 55932049 55954025 55932049 55954025 + transcript2134.chr12.nic@DGKA transcript2134.chr12.nic protein_coding 55932049,55936423,55937017,55937408,55937978,55938511,55938915,55939186,55939415,55940082,55940314,55940624,55940897,55941252,55941510,55941998,55942174,55951623,55952035,55952341,55952734,55953040,55953350,55953685 55932123,55936567,55937090,55937543,55938052,55938560,55938989,55939305,55939529,55940170,55940433,55940722,55940980,55941325,55941584,55942083,55942263,55951783,55952099,55952431,55952932,55953160,55953410,55954025 Gene ID= ENSG00000065357.19 TPM= 22.64 Transcript Type= NA chr12 55932028 55954021 55932028 55954021 + ENST00000394147.5@DGKA ENST00000394147.5 protein_coding 55932028,55936423,55937017,55937408,55937978,55938511,55938915,55939186,55939415,55940082,55940314,55940624,55940897,55941252,55941510,55941998,55942174,55951623,55952035,55952341,55952734,55953040,55953350,55953685 55932255,55936567,55937090,55937543,55938052,55938560,55938989,55939305,55939529,55940170,55940433,55940722,55940980,55941325,55941584,55942083,55942263,55951783,55952099,55952431,55952932,55953160,55953410,55954021 Gene ID= ENSG00000065357.19 TPM= 5.43 Transcript Type= protein_coding chr12 55966769 55972784 55966769 55972784 + ENST00000266970.8@CDK2 ENST00000266970.8 protein_coding 55966769,55967857,55968049,55968778,55969475,55971044,55971521 55967124,55967934,55968169,55968948,55969576,55971247,55972784 Gene ID= ENSG00000123374.10 TPM= 25.36 Transcript Type= protein_coding chr12 55974011 55996683 55974011 55996683 + ENST00000360299.9@RAB5B ENST00000360299.9 protein_coding 55974011,55986869,55989947,55990682,55991360,55992097 55974139,55987123,55990098,55990804,55991453,55996683 Gene ID= ENSG00000111540.15 TPM= 64.29 Transcript Type= protein_coding chr12 55997231 56005525 55997231 56005525 + ENST00000266971.7@SUOX ENST00000266971.7 protein_coding 55997231,55997615,56002212,56002543,56003618 55997339,55997723,56002271,56002720,56005525 Gene ID= ENSG00000139531.12 TPM= 48.9 Transcript Type= protein_coding chr12 55997288 56005486 55997288 56005486 + ENST00000394115.6@SUOX ENST00000394115.6 protein_coding 55997288,55997615,55999333,56002212,56002543,56003618 55997339,55997723,55999458,56002271,56002720,56005486 Gene ID= ENSG00000139531.12 TPM= 7.24 Transcript Type= protein_coding chr12 56041853 56044675 56041853 56044675 + ENST00000356464.9@RPS26 ENST00000356464.9 protein_coding 56041853,56042425,56043363,56044119 56042169,56042602,56043493,56044675 Gene ID= ENSG00000197728.9 TPM= 38.49 Transcript Type= protein_coding chr12 56042140 56044223 56042140 56044223 + ENST00000548590.1@RPS26 ENST00000548590.1 protein_coding 56042140,56042425,56044119 56042169,56043493,56044223 Gene ID= ENSG00000197728.9 TPM= 1.36 Transcript Type= retained_intron chr12 56104566 56113903 56104566 56113903 + transcript2162.chr12.nnic@PA2G4 transcript2162.chr12.nnic protein_coding 56104566,56106588,56106990,56107187,56107521,56109230,56109857,56110399,56110559,56110964,56111182,56111476,56112823,56112980 56104825,56106716,56107095,56107256,56107613,56109293,56109935,56110477,56110692,56111058,56111309,56111529,56112889,56113903 Gene ID= ENSG00000170515.13 TPM= 3.62 Transcript Type= NA chr12 56116590 56117832 56116590 56117832 + ENST00000501597.3@RPL41 ENST00000501597.3 protein_coding 56116590,56116775,56117189,56117482 56116659,56116799,56117211,56117832 Gene ID= ENSG00000229117.8 TPM= 2236.7 Transcript Type= protein_coding chr12 56116633 56117826 56116633 56117826 + ENST00000358888.7@RPL41 ENST00000358888.7 protein_coding 56116633,56116775,56117189,56117482 56116659,56116930,56117211,56117826 Gene ID= ENSG00000229117.8 TPM= 43.92 Transcript Type= processed_transcript chr12 56118159 56127514 56118159 56127514 + ENST00000257940.6@ZC3H10 ENST00000257940.6 protein_coding 56118159,56119088,56120511 56118318,56119151,56127514 Gene ID= ENSG00000135482.6 TPM= 25.36 Transcript Type= protein_coding chr12 56128056 56144671 56128056 56144671 + ENST00000394048.9@ESYT1 ENST00000394048.9 protein_coding 56128056,56130582,56130791,56131040,56131244,56131477,56131749,56132209,56132421,56132719,56133417,56133588,56133781,56134110,56134342,56136744,56137218,56137499,56137832,56138026,56138183,56138404,56138768,56138927,56142285,56142578,56142835,56143017,56143228,56143580,56143823 56128709,56130623,56130925,56131113,56131316,56131566,56131804,56132332,56132597,56132801,56133465,56133674,56133873,56134181,56134428,56136893,56137373,56137675,56137914,56138074,56138272,56138499,56138839,56139013,56142425,56142732,56142933,56143148,56143333,56143629,56144671 Gene ID= ENSG00000139641.12 TPM= 255.36 Transcript Type= protein_coding chr12 56152574 56157988 56152574 56157988 + transcript2211.chr12.nic@MYL6B transcript2211.chr12.nic protein_coding 56152574,56153873,56154813,56155055,56155419,56157468,56157698,56157882 56152631,56154092,56154840,56155198,56155592,56157545,56157735,56157988 Gene ID= ENSG00000196465.10 TPM= 9.06 Transcript Type= NA chr12 56157357 56157976 56157357 56157976 + ENST00000550550.5@MYL6B ENST00000550550.5 protein_coding 56157357,56157698,56157882 56157545,56157735,56157976 Gene ID= ENSG00000196465.10 TPM= 7.24 Transcript Type= retained_intron chr12 56157615 56157981 56157615 56157981 + ENST00000549380.1@MYL6B ENST00000549380.1 protein_coding 56157615,56157882 56157735,56157981 Gene ID= ENSG00000196465.10 TPM= 2.72 Transcript Type= retained_intron chr12 56158356 56161587 56158356 56161587 + ENST00000348108.8@MYL6 ENST00000348108.8 protein_coding 56158356,56158681,56159587,56159975,56160243,56160626,56161387 56158404,56158711,56159730,56160148,56160320,56160670,56161587 Gene ID= ENSG00000092841.18 TPM= 60.4 Transcript Type= protein_coding chr12 56158362 56161574 56158362 56161574 + ENST00000547649.5@MYL6 ENST00000547649.5 protein_coding 56158362,56158684,56159587,56159975,56160243,56161387 56158404,56158711,56159730,56160148,56160320,56161574 Gene ID= ENSG00000092841.18 TPM= 498.38 Transcript Type= protein_coding chr12 56158346 56161575 56158346 56161575 + ENST00000548580.5@MYL6 ENST00000548580.5 protein_coding 56158346,56158684,56159975,56160243,56161387 56158404,56158711,56160148,56160320,56161575 Gene ID= ENSG00000092841.18 TPM= 10.3 Transcript Type= protein_coding chr12 56158382 56161575 56158382 56161575 + ENST00000548400.5@MYL6 ENST00000548400.5 protein_coding 56158382,56158684,56159587,56159975,56160243,56160626,56161387 56158404,56158711,56159622,56160148,56160320,56160670,56161575 Gene ID= ENSG00000092841.18 TPM= 12.41 Transcript Type= protein_coding chr12 56158368 56163008 56158368 56163008 + ENST00000547408.5@MYL6 ENST00000547408.5 protein_coding 56158368,56158684,56159587,56159975,56160243,56162264,56162855 56158404,56158711,56159730,56160148,56160320,56162331,56163008 Gene ID= ENSG00000092841.18 TPM= 1.06 Transcript Type= protein_coding chr12 56162359 56189538 56162359 56189538 - transcript2197.chr12.nic@SMARCC2 transcript2197.chr12.nic protein_coding 56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56164303,56162359 56189538,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56164368,56163765 Gene ID= ENSG00000139613.11 TPM= 26.92 Transcript Type= NA chr12 56162356 56189540 56162356 56189540 - transcript2201.chr12.nic@SMARCC2 transcript2201.chr12.nic protein_coding 56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164648,56162356 56189540,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765 Gene ID= ENSG00000139613.11 TPM= 38.69 Transcript Type= NA chr12 56162359 56189493 56162359 56189493 - transcript2203.chr12.nnic@SMARCC2 transcript2203.chr12.nnic protein_coding 56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178776,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56162359 56189493,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765 Gene ID= ENSG00000139613.11 TPM= 9.12 Transcript Type= NA chr12 56163328 56189476 56163328 56189476 - ENST00000550164.5@SMARCC2 ENST00000550164.5 protein_coding 56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172937,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56163328 56189476,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56173029,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765 Gene ID= ENSG00000139613.11 TPM= 10.26 Transcript Type= protein_coding chr12 56163345 56189548 56163345 56189548 - ENST00000267064.8@SMARCC2 ENST00000267064.8 protein_coding 56189351,56187187,56186155,56185030,56184844,56184175,56183861,56182004,56181704,56181482,56180977,56178997,56178810,56178404,56178022,56174651,56173696,56172585,56172428,56171679,56171271,56170144,56169776,56169529,56168060,56165318,56164303,56163345 56189548,56187306,56186240,56185111,56184936,56184244,56183930,56182079,56181835,56181597,56181101,56179056,56178847,56178534,56178093,56174764,56173849,56172704,56172490,56171937,56171432,56170208,56169911,56169695,56168194,56165699,56164731,56163765 Gene ID= ENSG00000139613.11 TPM= 13.34 Transcript Type= protein_coding chr12 56224325 56229854 56224325 56229854 + ENST00000267023.8@NABP2 ENST00000267023.8 protein_coding 56224325,56224834,56225373,56225624,56226179,56226356,56229014 56224441,56224935,56225511,56225695,56226260,56226419,56229854 Gene ID= ENSG00000139579.12 TPM= 43.92 Transcript Type= protein_coding chr12 56224359 56229854 56224359 56229854 + ENST00000380198.6@NABP2 ENST00000380198.6 protein_coding 56224359,56225373,56225624,56226179,56226356,56229014 56224935,56225511,56225695,56226260,56226419,56229854 Gene ID= ENSG00000139579.12 TPM= 9.51 Transcript Type= protein_coding chr12 56266858 56270964 56266858 56270964 + ENST00000308197.9@COQ10A ENST00000308197.9 protein_coding 56266858,56267794,56269059,56269460,56270150 56267252,56267940,56269251,56269561,56270964 Gene ID= ENSG00000135469.13 TPM= 13.58 Transcript Type= protein_coding chr12 56266858 56270965 56266858 56270965 + transcript2242.chr12.nic@COQ10A transcript2242.chr12.nic protein_coding 56266858,56267794,56270150 56267252,56269561,56270965 Gene ID= ENSG00000135469.13 TPM= 1.81 Transcript Type= NA chr12 56267283 56270966 56267283 56270966 + ENST00000433805.6@COQ10A ENST00000433805.6 protein_coding 56267283,56267794,56269059,56269460,56270150 56267433,56267940,56269251,56269561,56270966 Gene ID= ENSG00000135469.13 TPM= 9.96 Transcript Type= protein_coding chr12 56271685 56300333 56271685 56300333 - transcript2252.chr12.nic@CS transcript2252.chr12.nic protein_coding 56300160,56286595,56285916,56282860,56282420,56275996,56275002,56274777,56273587,56271685 56300333,56286645,56286023,56282991,56282608,56276195,56275131,56274878,56273796,56273254 Gene ID= ENSG00000062485.18 TPM= 14.94 Transcript Type= NA chr12 56271701 56300392 56271701 56300392 - ENST00000351328.7@CS ENST00000351328.7 protein_coding 56300160,56286595,56285916,56283792,56282860,56282420,56275996,56275002,56274777,56273587,56271701 56300392,56286645,56286023,56283857,56282991,56282608,56276195,56275131,56274878,56273796,56273254 Gene ID= ENSG00000062485.18 TPM= 49.96 Transcript Type= protein_coding chr12 56300142 56314788 56300142 56314788 + ENST00000549565.1@AC073896.2 ENST00000549565.1 antisense_RNA 56300142,56312407,56314529 56300187,56312499,56314788 Gene ID= ENSG00000257303.1 TPM= 3.62 Transcript Type= antisense_RNA chr12 56310428 56316336 56310428 56316336 - ENST00000273308.8@CNPY2 ENST00000273308.8 protein_coding 56315821,56315130,56314851,56311211,56310958,56310428 56316336,56315242,56314966,56311414,56311054,56310595 Gene ID= ENSG00000257727.5 TPM= 87.84 Transcript Type= protein_coding chr12 56314490 56316047 56314490 56316047 - ENST00000548013.5@CNPY2 ENST00000548013.5 protein_coding 56315821,56315130,56314490 56316047,56315242,56314966 Gene ID= ENSG00000257727.5 TPM= 12.22 Transcript Type= retained_intron chr12 56314508 56316000 56314508 56316000 - ENST00000553164.1@CNPY2 ENST00000553164.1 protein_coding 56315907,56315130,56314508 56316000,56315242,56314966 Gene ID= ENSG00000257727.5 TPM= 1.36 Transcript Type= retained_intron chr12 56316936 56334053 56316936 56334053 - ENST00000440411.7@PAN2 ENST00000440411.7 protein_coding 56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324049,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56318237,56316936 56334053,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324185,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56318434,56317643 Gene ID= ENSG00000135473.14 TPM= 31.24 Transcript Type= protein_coding chr12 56316937 56334041 56316937 56334041 - transcript2263.chr12.nic@PAN2 transcript2263.chr12.nic protein_coding 56333862,56332813,56328472,56328238,56327995,56327364,56326617,56326313,56325335,56325009,56324581,56324294,56324049,56323807,56323500,56323311,56323062,56322615,56322423,56322078,56319864,56319621,56319308,56319088,56316937 56334041,56333208,56328641,56328358,56328072,56327631,56326959,56326409,56325454,56325128,56324709,56324493,56324185,56323913,56323598,56323384,56323209,56322758,56322482,56322168,56320021,56319764,56319487,56319181,56317643 Gene ID= ENSG00000135473.14 TPM= 2.26 Transcript Type= NA chr12 56417119 56449403 56417119 56449403 - ENST00000229201.4@TIMELESS ENST00000229201.4 protein_coding 56449310,56434074,56433773,56433538,56433381,56433026,56432369,56431471,56430881,56430105,56428883,56428549,56428236,56425015,56424762,56423797,56423584,56423274,56422847,56422106,56421899,56421727,56421351,56420963,56420813,56420569,56418134,56417907,56417119 56449403,56434231,56433926,56433652,56433443,56433127,56432521,56431604,56430968,56430281,56429100,56428652,56428405,56425152,56424913,56423894,56423707,56423475,56422992,56422191,56422016,56421809,56421493,56421134,56420881,56420687,56418359,56418008,56417786 Gene ID= ENSG00000111602.11 TPM= 14.49 Transcript Type= protein_coding chr12 56470952 56488397 56470952 56488397 - ENST00000311966.8@GLS2 ENST00000311966.8 protein_coding 56487937,56480288,56479780,56479052,56478183,56477933,56477660,56475945,56475624,56475044,56474846,56474544,56473463,56473228,56472690,56472119,56471773,56470952 56488397,56480387,56479901,56479181,56478262,56478096,56477718,56475977,56475682,56475110,56474896,56474720,56473594,56473320,56472751,56472195,56471836,56471643 Gene ID= ENSG00000135423.12 TPM= 3.62 Transcript Type= protein_coding chr12 56638179 56646068 56638179 56646068 - ENST00000262030.7@ATP5B ENST00000262030.7 protein_coding 56645837,56645171,56644781,56643837,56643403,56642673,56642458,56639980,56639106,56638179 56646068,56645353,56644955,56643958,56643587,56642831,56642580,56640192,56639307,56638423 Gene ID= ENSG00000110955.8 TPM= 1120.46 Transcript Type= protein_coding chr12 56663343 56688300 56663343 56688300 - ENST00000262033.10@PTGES3 ENST00000262033.10 protein_coding 56687998,56672952,56672740,56671749,56670275,56666204,56664776,56663343 56688300,56673065,56672809,56671847,56670364,56666266,56664800,56664498 Gene ID= ENSG00000110958.15 TPM= 254.01 Transcript Type= protein_coding chr12 56663613 56688287 56663613 56688287 - ENST00000414274.7@PTGES3 ENST00000414274.7 protein_coding 56687998,56672952,56672740,56671749,56666204,56664776,56663613 56688287,56673065,56672809,56671847,56666266,56664800,56664498 Gene ID= ENSG00000110958.15 TPM= 10.87 Transcript Type= protein_coding chr12 56712435 56725267 56712435 56725267 - ENST00000393891.8@NACA ENST00000393891.8 protein_coding 56724962,56724452,56714602,56714362,56713537,56713062,56712786,56712435 56725267,56724523,56714687,56714439,56713683,56713190,56712908,56712552 Gene ID= ENSG00000196531.10 TPM= 33.35 Transcript Type= protein_coding chr12 56994446 56998441 56994446 56998441 + ENST00000300098.2@GPR182 ENST00000300098.2 protein_coding 56994446,56995194 56994648,56998441 Gene ID= ENSG00000166856.2 TPM= 17.21 Transcript Type= protein_coding chr12 57088894 57095476 57088894 57095476 + ENST00000300131.7@NAB2 ENST00000300131.7 protein_coding 57088894,57091125,57092448,57092917,57093063,57093407,57094612 57089354,57091998,57092581,57092968,57093195,57093598,57095476 Gene ID= ENSG00000166886.12 TPM= 14.49 Transcript Type= protein_coding chr12 57095408 57111387 57095408 57111387 - transcript2346.chr12.nic@STAT6 transcript2346.chr12.nic protein_coding 57111129,57110043,57108163,57107605,57107231,57106693,57106528,57106191,57105468,57105151,57104726,57104464,57102829,57102290,57099996,57099767,57099294,57099015,57098792,57098505,57097068,57096850,57095408 57111387,57110110,57108299,57107743,57107314,57106831,57106580,57106339,57105599,57105339,57104813,57104586,57102921,57102496,57100090,57099903,57099440,57099078,57098902,57098597,57097133,57096978,57096761 Gene ID= ENSG00000166888.11 TPM= 24.24 Transcript Type= NA chr12 57095408 57111433 57095408 57111433 - ENST00000300134.7@STAT6 ENST00000300134.7 protein_coding 57111129,57108163,57107605,57107231,57106693,57106528,57106191,57105468,57105151,57104726,57104464,57102829,57102290,57099996,57099767,57099294,57099015,57098792,57098505,57097068,57096850,57095408 57111433,57108299,57107743,57107314,57106831,57106580,57106339,57105599,57105339,57104813,57104586,57102921,57102496,57100090,57099903,57099440,57099078,57098902,57098597,57097133,57096978,57096761 Gene ID= ENSG00000166888.11 TPM= 159.39 Transcript Type= protein_coding chr12 57095408 57111441 57095408 57111441 - transcript2357.chr12.nic@STAT6 transcript2357.chr12.nic protein_coding 57111129,57108163,57107605,57107231,57106693,57106528,57105468,57105151,57104726,57104464,57102829,57102290,57099996,57099767,57099294,57099015,57098792,57098505,57097068,57096850,57095408 57111441,57108299,57107743,57107314,57106831,57106580,57106339,57105339,57104813,57104586,57102921,57102496,57100090,57099903,57099440,57099078,57098902,57098597,57097133,57096978,57096761 Gene ID= ENSG00000166888.11 TPM= 23.86 Transcript Type= NA chr12 57229648 57234940 57229648 57234940 + transcript2368.chr12.nic@SHMT2 transcript2368.chr12.nic protein_coding 57229648,57230803,57231481,57231713,57232211,57232425,57232704,57233180,57233563,57233749,57234003,57234234 57229811,57231000,57231560,57231913,57232292,57232575,57232843,57233345,57233662,57233904,57234110,57234940 Gene ID= ENSG00000182199.10 TPM= 37.13 Transcript Type= NA chr12 57253765 57431005 57253765 57431005 - ENST00000402412.5@R3HDM2 ENST00000402412.5 protein_coding 57430720,57395749,57310264,57303176,57300095,57299352,57298090,57297328,57296411,57295399,57292572,57289009,57283824,57280358,57269752,57269323,57268922,57268303,57266731,57258890,57257990,57256414,57255990,57253765 57431005,57395818,57310463,57303217,57300181,57299478,57298168,57297387,57296551,57295507,57292667,57289040,57284056,57280530,57269994,57269449,57269082,57268457,57266831,57259059,57258137,57256511,57256074,57255113 Gene ID= ENSG00000179912.20 TPM= 24.45 Transcript Type= protein_coding chr12 57472262 57477889 57472262 57477889 - transcript2395.chr12.nic@ARHGAP9 transcript2395.chr12.nic protein_coding 57477785,57477459,57477156,57476590,57476364,57476071,57475833,57475483,57475291,57474875,57474626,57474423,57474042,57473603,57472262 57477889,57477680,57477269,57476651,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57473708,57472688 Gene ID= ENSG00000123329.17 TPM= 3.17 Transcript Type= NA chr12 57472264 57477889 57472264 57477889 - transcript2398.chr12.nic@ARHGAP9 transcript2398.chr12.nic protein_coding 57477785,57477459,57477156,57476871,57476590,57476364,57476071,57475833,57475483,57475291,57474875,57474626,57474423,57474042,57472264 57477889,57477680,57477269,57476963,57476651,57476454,57476166,57475931,57475615,57475398,57474973,57474703,57474476,57474176,57472688 Gene ID= ENSG00000123329.17 TPM= 2.26 Transcript Type= NA chr12 57487957 57516649 57487957 57516649 + ENST00000262027.9@MARS ENST00000262027.9 protein_coding 57487957,57489019,57489267,57489424,57489896,57490207,57490538,57498157,57498420,57500321,57504225,57511698,57512008,57512236,57512751,57514720,57514954,57515150,57515920,57516245,57516435 57488199,57489109,57489345,57489558,57489971,57490379,57490644,57498273,57498623,57500522,57504299,57511868,57512103,57512353,57512964,57514851,57515058,57515336,57515991,57516337,57516649 Gene ID= ENSG00000166986.14 TPM= 158.02 Transcript Type= protein_coding chr12 57516593 57520517 57516593 57520517 - ENST00000346473.7@DDIT3 ENST00000346473.7 protein_coding 57520418,57517706,57517269,57516593 57520517,57517753,57517438,57517180 Gene ID= ENSG00000175197.11 TPM= 24.45 Transcript Type= protein_coding chr12 57522744 57530148 57522744 57530148 + ENST00000355673.7@MBD6 ENST00000355673.7 protein_coding 57522744,57524029,57524280,57524720,57524953,57525348,57526566,57527507,57527848,57528147,57528666,57528946,57529160 57523011,57524092,57524416,57524822,57525115,57526388,57527227,57527660,57528017,57528560,57528718,57529009,57530148 Gene ID= ENSG00000166987.14 TPM= 22.64 Transcript Type= protein_coding chr12 57530051 57547209 57530051 57547209 - transcript2412.chr12.nic@DCTN2 transcript2412.chr12.nic protein_coding 57547028,57535749,57535484,57535056,57534292,57533953,57533238,57532984,57532733,57532572,57532213,57532015,57530051 57547209,57535845,57535545,57535154,57534452,57534097,57533303,57533022,57532810,57532643,57532315,57532106,57530775 Gene ID= ENSG00000175203.15 TPM= 19.02 Transcript Type= NA chr12 57591192 57603429 57591192 57603429 + transcript2425.chr12.nic@PIP4K2C transcript2425.chr12.nic protein_coding 57591192,57594025,57595126,57595888,57599065,57599400,57600324,57601245,57601526 57591463,57594122,57595222,57596031,57599211,57599438,57601078,57601348,57603429 Gene ID= ENSG00000166908.17 TPM= 4.53 Transcript Type= NA chr12 57591203 57603418 57591203 57603418 + ENST00000540759.6@PIP4K2C ENST00000540759.6 protein_coding 57591203,57594025,57595126,57595888,57599065,57599400,57600324,57600811,57601245,57601526,57601926 57591463,57594122,57595222,57596031,57599211,57599438,57600437,57601078,57601348,57601636,57603418 Gene ID= ENSG00000166908.17 TPM= 3.62 Transcript Type= protein_coding chr12 57604818 57609803 57604818 57609803 + transcript2429.chr12.nic@DTX3 transcript2429.chr12.nic protein_coding 57604818,57605571,57606190,57606443,57606884,57608520,57609077 57604858,57605731,57606252,57606518,57607613,57608737,57609803 Gene ID= ENSG00000178498.15 TPM= 3.2 Transcript Type= NA chr12 57604818 57609803 57604818 57609803 + transcript2432.chr12.nic@DTX3 transcript2432.chr12.nic protein_coding 57604818,57605344,57606190,57606443,57606865,57608520,57609077 57604858,57605731,57606252,57606518,57607613,57608737,57609803 Gene ID= ENSG00000178498.15 TPM= 7.27 Transcript Type= NA chr12 57604821 57609800 57604821 57609800 + ENST00000337737.7@DTX3 ENST00000337737.7 protein_coding 57604821,57605571,57606190,57606443,57606865,57608520,57609077 57604858,57605731,57606252,57606518,57607613,57608737,57609800 Gene ID= ENSG00000178498.15 TPM= 12.7 Transcript Type= protein_coding chr12 57604622 57609800 57604622 57609800 + ENST00000548804.5@DTX3 ENST00000548804.5 protein_coding 57604622,57606190,57606443,57606865,57608520,57609077 57604858,57606252,57606518,57607613,57608737,57609800 Gene ID= ENSG00000178498.15 TPM= 8.63 Transcript Type= protein_coding chr12 57604824 57609803 57604824 57609803 + ENST00000548198.5@DTX3 ENST00000548198.5 protein_coding 57604824,57606443,57606865,57608520,57609077 57606252,57606518,57607613,57608737,57609803 Gene ID= ENSG00000178498.15 TPM= 1.2 Transcript Type= protein_coding chr12 57604834 57609804 57604834 57609804 + ENST00000551632.1@DTX3 ENST00000551632.1 protein_coding 57604834,57606190,57606443,57606884,57608520,57609077 57604858,57606252,57606518,57607613,57608737,57609804 Gene ID= ENSG00000178498.15 TPM= 2.29 Transcript Type= protein_coding chr12 57694121 57721555 57694121 57721555 + ENST00000315970.11@OS9 ENST00000315970.11 protein_coding 57694121,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720099,57720406,57720784 57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720263,57720518,57721555 Gene ID= ENSG00000135506.15 TPM= 415.76 Transcript Type= protein_coding chr12 57694145 57721555 57694145 57721555 + ENST00000257966.12@OS9 ENST00000257966.12 protein_coding 57694145,57694750,57695780,57695962,57696275,57715760,57716089,57716412,57716693,57717870,57718146,57718993,57720406,57720784 57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718421,57719182,57720518,57721555 Gene ID= ENSG00000135506.15 TPM= 169.16 Transcript Type= protein_coding chr12 57694147 57721557 57694147 57721557 + ENST00000389142.9@OS9 ENST00000389142.9 protein_coding 57694147,57694750,57695780,57695962,57696275,57715760,57716092,57716412,57716693,57717870,57718146,57718993,57720406,57720784 57694323,57694926,57695843,57696038,57696373,57715970,57716193,57716512,57716744,57717958,57718376,57719182,57720518,57721557 Gene ID= ENSG00000135506.15 TPM= 9.78 Transcript Type= protein_coding chr12 57726271 57728356 57726271 57728356 + ENST00000542466.2@AGAP2-AS1 ENST00000542466.2 antisense_RNA 57726271,57726965 57726378,57728356 Gene ID= ENSG00000255737.2 TPM= 21.73 Transcript Type= antisense_RNA chr12 57745379 57748221 57745379 57748221 + transcript2483.chr12.nic@TSPAN31 transcript2483.chr12.nic protein_coding 57745379,57745745,57746176,57746589,57747018,57747216 57745439,57745912,57746256,57746720,57747131,57748221 Gene ID= ENSG00000135452.9 TPM= 7.7 Transcript Type= NA chr12 57747727 57752521 57747727 57752521 - ENST00000257904.10@CDK4 ENST00000257904.10 protein_coding 57752175,57751500,57751207,57750923,57750656,57749454,57749182,57747727 57752521,57751736,57751342,57751090,57750765,57749504,57749317,57748617 Gene ID= ENSG00000135446.16 TPM= 165.71 Transcript Type= protein_coding chr12 57762339 57767251 57762339 57767251 - ENST00000228606.8@CYP27B1 ENST00000228606.8 protein_coding 57766847,57766007,57765297,57765011,57764754,57764378,57764098,57763611,57762339 57767251,57766197,57765499,57765211,57764926,57764550,57764176,57763808,57763255 Gene ID= ENSG00000111012.9 TPM= 2.26 Transcript Type= protein_coding chr12 57762335 57766510 57762335 57766510 - transcript2494.chr12.nic@CYP27B1 transcript2494.chr12.nic protein_coding 57766007,57765297,57765011,57764754,57764378,57764098,57763611,57762335 57766510,57765499,57765211,57764926,57764550,57764176,57763808,57763255 Gene ID= ENSG00000111012.9 TPM= 3.17 Transcript Type= NA chr12 57762335 57765630 57762335 57765630 - transcript2495.chr12.nic@CYP27B1 transcript2495.chr12.nic protein_coding 57765297,57765011,57764754,57764378,57764098,57763611,57762335 57765630,57765211,57764926,57764550,57764176,57763808,57763255 Gene ID= ENSG00000111012.9 TPM= 2.72 Transcript Type= NA chr12 57768583 57772114 57768583 57772114 - transcript2497.chr12.nic@METTL1 transcript2497.chr12.nic protein_coding 57771974,57771480,57771094,57769772,57769565,57769303,57768583 57772114,57771605,57771257,57769956,57769678,57769404,57769151 Gene ID= ENSG00000037897.16 TPM= 1.81 Transcript Type= NA chr12 57768471 57772793 57768471 57772793 - ENST00000324871.11@METTL1 ENST00000324871.11 protein_coding 57771974,57771094,57769772,57769565,57769303,57768471 57772793,57771257,57769956,57769678,57769404,57769151 Gene ID= ENSG00000037897.16 TPM= 16.3 Transcript Type= protein_coding chr12 57768587 57772570 57768587 57772570 - transcript2506.chr12.nic@METTL1 transcript2506.chr12.nic protein_coding 57771974,57769772,57769565,57769303,57768587 57772570,57769956,57769678,57769404,57769151 Gene ID= ENSG00000037897.16 TPM= 1.81 Transcript Type= NA chr12 57768473 57772123 57768473 57772123 - transcript2509.chr12.nic@METTL1 transcript2509.chr12.nic protein_coding 57769772,57769565,57769303,57768473 57772123,57769678,57769404,57769151 Gene ID= ENSG00000037897.16 TPM= 4.53 Transcript Type= NA chr12 57772607 57782540 57772607 57782540 + transcript2512.chr12.nnic@EEF1AKMT3 transcript2512.chr12.nnic protein_coding 57772607,57773017,57780255 57772901,57773073,57782540 Gene ID= ENSG00000123427.16 TPM= 5.43 Transcript Type= NA chr12 57782589 57797584 57782589 57797584 + ENST00000454289.7@TSFM ENST00000454289.7 protein_coding 57782589,57783110,57786163,57787040,57792986,57796177 57782858,57783283,57786291,57787162,57793073,57797584 Gene ID= ENSG00000123297.17 TPM= 99 Transcript Type= protein_coding chr12 57819924 57846971 57819924 57846971 - transcript2519.chr12.nnic@CTDSP2 transcript2519.chr12.nnic protein_coding 57846372,57829448,57828294,57827552,57826996,57826346,57824227,57823904,57819924 57846971,57829596,57828418,57827590,57827097,57826402,57824319,57824089,57823727 Gene ID= ENSG00000175215.10 TPM= 5.43 Transcript Type= NA chr12 57819924 57846971 57819924 57846971 - transcript2522.chr12.nic@CTDSP2 transcript2522.chr12.nic protein_coding 57846372,57829448,57827552,57826996,57826346,57824227,57823904,57819924 57846971,57829596,57827590,57827097,57826402,57824319,57824005,57823727 Gene ID= ENSG00000175215.10 TPM= 2.72 Transcript Type= NA chr12 57819924 57846971 57819924 57846971 - transcript2523.chr12.nic@CTDSP2 transcript2523.chr12.nic protein_coding 57846372,57829448,57827534,57826996,57826346,57824227,57823904,57819924 57846971,57829596,57827590,57827097,57826402,57824319,57824089,57823727 Gene ID= ENSG00000175215.10 TPM= 14.49 Transcript Type= NA chr12 57819927 57846739 57819927 57846739 - ENST00000398073.6@CTDSP2 ENST00000398073.6 protein_coding 57846372,57829448,57827552,57826996,57826346,57824227,57823904,57819927 57846739,57829596,57827590,57827097,57826402,57824319,57824089,57823727 Gene ID= ENSG00000175215.10 TPM= 176.58 Transcript Type= protein_coding chr12 57941562 57957268 57941562 57957268 + transcript2533.chr12.nnic@ATP23 transcript2533.chr12.nnic protein_coding 57941562,57945628,57946995,57951758,57953606,57956687 57941779,57945673,57947076,57951895,57953689,57957268 Gene ID= ENSG00000166896.7 TPM= 2.72 Transcript Type= NA chr12 57941577 57957269 57941577 57957269 + ENST00000300145.3@ATP23 ENST00000300145.3 protein_coding 57941577,57945628,57946995,57951758,57953606,57956687 57941888,57945673,57947076,57951895,57953689,57957269 Gene ID= ENSG00000166896.7 TPM= 9.96 Transcript Type= protein_coding chr12 61708249 61867431 61708249 61867431 - transcript2541.chr12.nic@FAM19A2 transcript2541.chr12.nic protein_coding 61867320,61754872,61753622,61708249 61867431,61755024,61753746,61710417 Gene ID= ENSG00000198673.10 TPM= 4.53 Transcript Type= NA chr12 62260357 62406119 62260357 62406119 + ENST00000280377.9@USP15 ENST00000280377.9 protein_coding 62260357,62294179,62302790,62314790,62321464,62325872,62349221,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193 62260503,62294306,62302920,62314916,62321609,62325933,62349307,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62406119 Gene ID= ENSG00000135655.15 TPM= 22.64 Transcript Type= protein_coding chr12 62260338 62416389 62260338 62416389 + ENST00000353364.7@USP15 ENST00000353364.7 protein_coding 62260338,62294179,62302790,62314790,62321464,62325872,62355331,62381490,62383840,62384078,62389431,62389605,62389797,62390864,62391157,62391816,62392272,62393053,62396295,62401187,62404193 62260503,62294306,62302920,62314916,62321609,62325933,62355475,62381663,62383998,62384302,62389514,62389699,62389988,62390979,62391429,62391886,62392387,62393202,62396398,62401275,62416389 Gene ID= ENSG00000135655.15 TPM= 6.34 Transcript Type= protein_coding chr12 62260397 62336690 62260397 62336690 + ENST00000312635.10@USP15 ENST00000312635.10 protein_coding 62260397,62294179,62302790,62314790,62321464,62325872,62335166 62260503,62294306,62302920,62314916,62321609,62325933,62336690 Gene ID= ENSG00000135655.15 TPM= 2.72 Transcript Type= protein_coding chr12 63142752 63152189 63142752 63152189 - transcript2556.chr12.nnic@AVPR1A transcript2556.chr12.nnic protein_coding 63149867,63147421,63142752 63152189,63147645,63144687 Gene ID= ENSG00000166148.3 TPM= 7.24 Transcript Type= NA chr12 63142809 63152216 63142809 63152216 - transcript2557.chr12.nnic@AVPR1A transcript2557.chr12.nnic protein_coding 63152133,63147421,63142809 63152216,63147645,63144687 Gene ID= ENSG00000166148.3 TPM= 1.81 Transcript Type= NA chr12 63142759 63150942 63142759 63150942 - ENST00000299178.3@AVPR1A ENST00000299178.3 protein_coding 63149867,63142759 63150942,63147645 Gene ID= ENSG00000166148.3 TPM= 24.45 Transcript Type= protein_coding chr12 63590615 63668664 63590615 63668664 - transcript2567.chr12.nic@DPY19L2 transcript2567.chr12.nic protein_coding 63668057,63665835,63663758,63661344,63647245,63644403,63626469,63624040,63621238,63618151,63617304,63608616,63600306,63597809,63595966,63594087,63590615 63668664,63665859,63663845,63661481,63647365,63644496,63626526,63624131,63621337,63618228,63617390,63608675,63600386,63597910,63596037,63594133,63591127 Gene ID= ENSG00000177990.11 TPM= 1.81 Transcript Type= NA chr12 63780116 63809559 63780116 63809559 + transcript2573.chr12.nic@TMEM5 transcript2573.chr12.nic protein_coding 63780116,63781019,63782541,63784970,63802091,63805234,63808675 63780462,63781174,63782704,63785072,63802405,63805404,63809559 Gene ID= ENSG00000118600.11 TPM= 8.83 Transcript Type= NA chr12 63779803 63809520 63779803 63809520 + ENST00000261234.10@TMEM5 ENST00000261234.10 protein_coding 63779803,63781019,63784970,63802091,63805234,63808675 63780129,63781174,63785072,63802405,63805404,63809520 Gene ID= ENSG00000118600.11 TPM= 54.11 Transcript Type= protein_coding chr12 63779866 63809100 63779866 63809100 + ENST00000543342.5@TMEM5 ENST00000543342.5 protein_coding 63779866,63781019,63782541,63784970,63802091,63805234,63808675 63780129,63781174,63782704,63785072,63802405,63805404,63809100 Gene ID= ENSG00000118600.11 TPM= 6.11 Transcript Type= nonsense_mediated_decay chr12 63780126 63809558 63780126 63809558 + ENST00000537373.5@TMEM5 ENST00000537373.5 protein_coding 63780126,63781019,63784970,63802091,63805234,63808675 63780462,63781174,63785072,63802405,63805404,63809558 Gene ID= ENSG00000118600.11 TPM= 12.45 Transcript Type= protein_coding chr12 64186316 64222265 64186316 64222265 - ENST00000311915.12@C12orf66 ENST00000311915.12 protein_coding 64222003,64215678,64193847,64186316 64222265,64215963,64194658,64187652 Gene ID= ENSG00000174206.12 TPM= 2.72 Transcript Type= protein_coding chr12 64404378 64448681 64404378 64448681 + transcript2582.chr12.nic@XPOT transcript2582.chr12.nic protein_coding 64404378,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105 64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425138,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448681 Gene ID= ENSG00000184575.11 TPM= 3.62 Transcript Type= NA chr12 64404461 64448688 64404461 64448688 + transcript2584.chr12.nic@XPOT transcript2584.chr12.nic protein_coding 64404461,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105 64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64448688 Gene ID= ENSG00000184575.11 TPM= 2.72 Transcript Type= NA chr12 64404350 64451127 64404350 64451127 + ENST00000332707.9@XPOT ENST00000332707.9 protein_coding 64404350,64409962,64414907,64416698,64418046,64418876,64420070,64420353,64421235,64423005,64423182,64424599,64425038,64425338,64425815,64428051,64430049,64431538,64433414,64434507,64434794,64435627,64439244,64445075,64448105 64404804,64410095,64414989,64416754,64418115,64419094,64420254,64420521,64421471,64423043,64423244,64424723,64425182,64425457,64425909,64428120,64430287,64431823,64433603,64434623,64434909,64435674,64439315,64445131,64451127 Gene ID= ENSG00000184575.11 TPM= 97.8 Transcript Type= protein_coding chr12 64452245 64502120 64452245 64502120 + transcript2592.chr12.nic@TBK1 transcript2592.chr12.nic protein_coding 64452245,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64484303,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648,64497968,64501330 64452395,64455957,64460329,64464463,64467082,64474390,64480122,64482021,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497754,64498039,64502120 Gene ID= ENSG00000183735.9 TPM= 2.72 Transcript Type= NA chr12 64451880 64502108 64451880 64502108 + ENST00000331710.9@TBK1 ENST00000331710.9 protein_coding 64451880,64455840,64460189,64464334,64466901,64474230,64480012,64481842,64484303,64485455,64485926,64488487,64490041,64495483,64495699,64496367,64496949,64497163,64497648,64497968,64501330 64452187,64455957,64460329,64464463,64467082,64474390,64480122,64482021,64484499,64485513,64486017,64488588,64490119,64495604,64495775,64496406,64497050,64497259,64497754,64498039,64502108 Gene ID= ENSG00000183735.9 TPM= 57.95 Transcript Type= protein_coding chr12 64610513 64697567 64610513 64697567 + ENST00000542104.5@RASSF3 ENST00000542104.5 protein_coding 64610513,64684787,64688216,64691470,64694763 64610743,64684894,64688453,64691579,64697567 Gene ID= ENSG00000153179.12 TPM= 11.77 Transcript Type= protein_coding chr12 64713449 64759447 64713449 64759447 - ENST00000258145.7@GNS ENST00000258145.7 protein_coding 64759085,64752698,64747712,64745659,64744809,64743141,64740606,64739381,64737004,64728956,64723006,64721595,64720022,64713449 64759447,64752757,64747918,64745724,64744907,64743308,64740688,64739499,64737107,64729057,64723113,64721705,64720182,64716819 Gene ID= ENSG00000135677.10 TPM= 720.41 Transcript Type= protein_coding chr12 64780520 64878628 64780520 64878628 + transcript2634.chr12.nic@TBC1D30 transcript2634.chr12.nic protein_coding 64780520,64785881,64787360,64827835,64828444,64830377,64832119,64836490,64838683,64843380,64864668,64866764,64870602,64875001 64781286,64786045,64787381,64827896,64828509,64830502,64832304,64836658,64838851,64843485,64864780,64866903,64870808,64878628 Gene ID= ENSG00000111490.12 TPM= 4.98 Transcript Type= NA chr12 64780749 64878628 64780749 64878628 + transcript2635.chr12.nnic@TBC1D30 transcript2635.chr12.nnic protein_coding 64780749,64785881,64787360,64827835,64828444,64830377,64832119,64836490,64838683,64843380,64864668,64866764,64875001 64781286,64786045,64787381,64827896,64828509,64830502,64832304,64836658,64838851,64843485,64864780,64866903,64878628 Gene ID= ENSG00000111490.12 TPM= 2.26 Transcript Type= NA chr12 65169571 65248327 65169571 65248327 + ENST00000308330.2@LEMD3 ENST00000308330.2 protein_coding 65169571,65210926,65215977,65218552,65238502,65238669,65239929,65240136,65240909,65243388,65245669,65245861,65246162 65171118,65210963,65216043,65218619,65238581,65238814,65240030,65240238,65241087,65243469,65245774,65245939,65248327 Gene ID= ENSG00000174106.2 TPM= 25.36 Transcript Type= protein_coding chr12 65278643 65466907 65278643 65466907 + ENST00000308259.9@MSRB3 ENST00000308259.9 protein_coding 65278643,65308529,65326826,65328526,65368998,65453728,65463155 65278865,65308655,65326934,65328603,65369026,65453825,65466907 Gene ID= ENSG00000174099.10 TPM= 6.79 Transcript Type= protein_coding chr12 65278643 65466906 65278643 65466906 + ENST00000355192.7@MSRB3 ENST00000355192.7 protein_coding 65278643,65326826,65328526,65368998,65453728,65463155 65278865,65326934,65328603,65369026,65453825,65466906 Gene ID= ENSG00000174099.10 TPM= 9.51 Transcript Type= protein_coding chr12 66136132 66170006 66136132 66170006 - transcript2645.chr12.nnic@TMBIM4 transcript2645.chr12.nnic protein_coding 66169855,66160736,66153340,66152271,66147908,66145841,66138724,66136132 66170006,66161172,66153448,66152376,66147941,66145958,66138769,66138166 Gene ID= ENSG00000155957.17 TPM= 11.09 Transcript Type= NA chr12 66136938 66170074 66136938 66170074 - transcript2647.chr12.nnic@TMBIM4 transcript2647.chr12.nnic protein_coding 66169855,66153340,66152271,66147908,66145841,66138724,66137564,66136938 66170074,66153448,66152376,66147941,66145958,66138769,66138166,66137418 Gene ID= ENSG00000155957.17 TPM= 144.21 Transcript Type= NA chr12 66135846 66170072 66135846 66170072 - ENST00000358230.7@TMBIM4 ENST00000358230.7 protein_coding 66169855,66153340,66152271,66147908,66145841,66138724,66135846 66170072,66153448,66152376,66147941,66145958,66138769,66138166 Gene ID= ENSG00000155957.17 TPM= 146.02 Transcript Type= protein_coding chr12 66137834 66169998 66137834 66169998 - ENST00000398033.8@TMBIM4 ENST00000398033.8 protein_coding 66169855,66153340,66152271,66147908,66145841,66137834 66169998,66153448,66152376,66147941,66145958,66138166 Gene ID= ENSG00000155957.17 TPM= 1.81 Transcript Type= protein_coding chr12 66137839 66170027 66137839 66170027 - ENST00000633367.1@TMBIM4 ENST00000633367.1 protein_coding 66169855,66153340,66152271,66147908,66145841,66138724,66137839 66170027,66153410,66152376,66147941,66145958,66138769,66138166 Gene ID= ENSG00000155957.17 TPM= 2.04 Transcript Type= nonsense_mediated_decay chr12 67269281 67319951 67269281 67319951 + ENST00000545606.5@CAND1 ENST00000545606.5 protein_coding 67269281,67281910,67292622,67295033,67297407,67297748,67298950,67302323,67304605,67305104,67307397,67309901,67310152,67311693,67312606 67269785,67282053,67292776,67295156,67297663,67297853,67299095,67302615,67304746,67306597,67307492,67310070,67310316,67311800,67319951 Gene ID= ENSG00000111530.12 TPM= 135.83 Transcript Type= protein_coding chr12 67648721 67665406 67648721 67665406 + ENST00000344096.3@DYRK2 ENST00000344096.3 protein_coding 67648721,67649797,67657106 67649182,67649945,67665406 Gene ID= ENSG00000127334.10 TPM= 19.92 Transcript Type= protein_coding chr12 67648778 67658909 67648778 67658909 + ENST00000393555.3@DYRK2 ENST00000393555.3 protein_coding 67648778,67657106 67649182,67658909 Gene ID= ENSG00000127334.10 TPM= 1.81 Transcript Type= protein_coding chr12 68294565 68332307 68294565 68332307 - transcript2671.chr12.nnic@MDM1 transcript2671.chr12.nnic protein_coding 68332228,68331107,68326657,68325441,68325172,68323073,68321525,68321347,68316581,68316078,68314948,68313644,68313443,68302620,68296923,68294565 68332307,68331221,68327021,68325575,68325247,68323240,68321628,68321446,68316610,68316253,68315265,68313753,68313552,68302872,68296982,68295366 Gene ID= ENSG00000111554.14 TPM= 1.81 Transcript Type= NA chr12 68294565 68332394 68294565 68332394 - transcript2672.chr12.nic@MDM1 transcript2672.chr12.nic protein_coding 68332228,68331107,68326657,68325441,68323073,68321525,68321347,68316581,68316078,68314948,68313644,68313443,68302620,68296923,68294565 68332394,68331221,68327021,68325575,68323240,68321628,68321446,68316610,68316253,68315265,68313753,68313552,68302872,68296982,68295366 Gene ID= ENSG00000111554.14 TPM= 6.34 Transcript Type= NA chr12 68325121 68332381 68325121 68332381 - ENST00000430606.3@MDM1 ENST00000430606.3 protein_coding 68332228,68331107,68325121 68332381,68331221,68327021 Gene ID= ENSG00000111554.14 TPM= 4.53 Transcript Type= protein_coding chr12 68610839 68671901 68610839 68671901 + ENST00000250559.13@RAP1B ENST00000250559.13 protein_coding 68610839,68648699,68650400,68651995,68654112,68656306,68657101,68659280 68611043,68648781,68650468,68652051,68654252,68656449,68657217,68671901 Gene ID= ENSG00000127314.17 TPM= 148.21 Transcript Type= protein_coding chr12 68610858 68660522 68610858 68660522 + ENST00000393436.9@RAP1B ENST00000393436.9 protein_coding 68610858,68648699,68650400,68651995,68654112,68656306,68657101,68659280 68611052,68648781,68650468,68652051,68654252,68656449,68657217,68660522 Gene ID= ENSG00000127314.17 TPM= 34.11 Transcript Type= protein_coding chr12 68686734 68745809 68686734 68745809 + ENST00000229179.8@NUP107 ENST00000229179.8 protein_coding 68686734,68688962,68689533,68690631,68691968,68696819,68700726,68702736,68709238,68710005,68713730,68715627,68719341,68719578,68721118,68721841,68722104,68725727,68726499,68727351,68731110,68731607,68732637,68733452,68734708,68735231,68741813,68742355 68687073,68689053,68689619,68690746,68692112,68696922,68700853,68702784,68709309,68710093,68713808,68715740,68719431,68719654,68721177,68721986,68722152,68725796,68726617,68727389,68731260,68731719,68732739,68733612,68734833,68735344,68741980,68745809 Gene ID= ENSG00000111581.9 TPM= 17.21 Transcript Type= protein_coding chr12 68809025 68843575 68809025 68843575 + transcript2698.chr12.nic@MDM2 transcript2698.chr12.nic protein_coding 68809025,68809208,68813554,68816812,68820325,68824363,68824555,68828771,68835829,68836672,68839274 68809086,68809292,68813628,68816945,68820374,68824430,68824651,68828931,68835984,68836749,68843575 Gene ID= ENSG00000135679.22 TPM= 37.13 Transcript Type= NA chr12 68842192 68933172 68842192 68933172 - transcript2699.chr12.nic@CPM transcript2699.chr12.nic protein_coding 68933142,68932678,68885792,68871784,68870215,68869325,68866896,68858923,68855981,68842192 68933172,68932840,68885889,68871956,68870399,68869495,68867048,68859071,68856679,68842329 Gene ID= ENSG00000135678.11 TPM= 2.72 Transcript Type= NA chr12 68851175 68933199 68851175 68933199 - ENST00000551568.5@CPM ENST00000551568.5 protein_coding 68933142,68932678,68885792,68871784,68870215,68869325,68866896,68858923,68851175 68933199,68932840,68885889,68871956,68870399,68869495,68867048,68859071,68856679 Gene ID= ENSG00000135678.11 TPM= 57.5 Transcript Type= protein_coding chr12 68854429 68933172 68854429 68933172 - transcript2705.chr12.nic@CPM transcript2705.chr12.nic protein_coding 68933142,68932678,68871784,68870215,68869325,68866896,68858923,68854429 68933172,68932840,68871956,68870399,68869495,68867048,68859071,68856679 Gene ID= ENSG00000135678.11 TPM= 4.07 Transcript Type= NA chr12 69239537 69274358 69239537 69274358 + ENST00000435070.6@CPSF6 ENST00000435070.6 protein_coding 69239537,69251129,69253051,69256697,69257732,69258590,69259428,69260044,69262373,69269512 69239706,69251338,69253154,69256842,69257905,69259094,69259543,69260197,69262562,69274358 Gene ID= ENSG00000111605.16 TPM= 77.42 Transcript Type= protein_coding chr12 69239616 69269939 69239616 69269939 + ENST00000266679.8@CPSF6 ENST00000266679.8 protein_coding 69239616,69251129,69253051,69256697,69257732,69258035,69258590,69259428,69260044,69262373,69269512 69239706,69251338,69253154,69256842,69257905,69258145,69259094,69259543,69260197,69262562,69269939 Gene ID= ENSG00000111605.16 TPM= 7.7 Transcript Type= protein_coding chr12 69348341 69354234 69348341 69354234 + ENST00000261267.6@LYZ ENST00000261267.6 protein_coding 69348341,69350108,69352220,69353153 69348544,69350272,69352298,69354234 Gene ID= ENSG00000090382.6 TPM= 20.83 Transcript Type= protein_coding chr12 69359743 69390868 69359743 69390868 + transcript2715.chr12.nnic@YEATS4 transcript2715.chr12.nnic protein_coding 69359743,69361317,69362788,69365633,69365790,69370706,69370888,69390147 69360023,69361646,69362907,69365699,69365884,69370798,69370975,69390868 Gene ID= ENSG00000127337.6 TPM= 1.81 Transcript Type= NA chr12 69359703 69390796 69359703 69390796 + ENST00000247843.6@YEATS4 ENST00000247843.6 protein_coding 69359703,69362788,69365633,69365790,69370706,69370888,69390147 69360023,69362907,69365699,69365884,69370798,69370975,69390796 Gene ID= ENSG00000127337.6 TPM= 40.75 Transcript Type= protein_coding chr12 69470391 69579175 69470391 69579175 + transcript2718.chr12.nnic@FRS2 transcript2718.chr12.nnic protein_coding 69470391,69480299,69486202,69530865,69532014,69562180,69569005,69570331,69571276,69572118,69574005 69470530,69480359,69486297,69530960,69532056,69562274,69569096,69570517,69571434,69572281,69579175 Gene ID= ENSG00000166225.8 TPM= 3.62 Transcript Type= NA chr12 69470375 69579175 69470375 69579175 + transcript2719.chr12.nic@FRS2 transcript2719.chr12.nic protein_coding 69470375,69530865,69532014,69537916,69562180,69569005,69570331,69571276,69572118,69574005 69470530,69530960,69532056,69537983,69562274,69569096,69570517,69571434,69572281,69579175 Gene ID= ENSG00000166225.8 TPM= 3.62 Transcript Type= NA chr12 69585334 69601570 69585334 69601570 + ENST00000299300.10@CCT2 ENST00000299300.10 protein_coding 69585334,69586270,69586753,69587505,69587930,69588150,69589485,69592059,69592976,69593510,69597156,69597638,69597968,69598322,69599863,69601295 69585524,69586344,69586818,69587616,69588006,69588262,69589687,69592159,69593103,69593613,69597275,69597766,69598071,69598421,69600004,69601570 Gene ID= ENSG00000166226.12 TPM= 146.7 Transcript Type= protein_coding chr12 69585666 69601565 69585666 69601565 + ENST00000543146.2@CCT2 ENST00000543146.2 protein_coding 69585666,69586270,69586753,69587505,69587930,69588150,69589485,69592059,69592976,69593510,69597156,69597638,69597968,69598322,69599863,69601295 69586009,69586344,69586818,69587616,69588006,69588262,69589687,69592159,69593103,69593613,69597275,69597766,69598071,69598421,69600004,69601565 Gene ID= ENSG00000166226.12 TPM= 5.43 Transcript Type= protein_coding chr12 69738681 69817377 69738681 69817377 + ENST00000247833.11@RAB3IP ENST00000247833.11 protein_coding 69738681,69755384,69756405,69784720,69794437,69795141,69800209,69801609,69812778,69812964,69815364 69739031,69755659,69756663,69784815,69794514,69795344,69800337,69801721,69812877,69813033,69817377 Gene ID= ENSG00000127328.21 TPM= 15.39 Transcript Type= protein_coding chr12 70242306 70243360 70242306 70243360 - ENST00000549651.1@LINC01481 ENST00000549651.1 antisense_RNA 70243066,70242306 70243360,70242893 Gene ID= ENSG00000257815.5 TPM= 5.43 Transcript Type= antisense_RNA chr12 70243442 70354992 70243442 70354992 + transcript2738.chr12.nic@CNOT2 transcript2738.chr12.nic protein_coding 70243442,70278132,70294237,70297759,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829 70243480,70278274,70294294,70297879,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354992 Gene ID= ENSG00000111596.11 TPM= 2.26 Transcript Type= NA chr12 70243433 70354258 70243433 70354258 + transcript2743.chr12.nic@CNOT2 transcript2743.chr12.nic protein_coding 70243433,70278132,70301705,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829 70243480,70278274,70301865,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354258 Gene ID= ENSG00000111596.11 TPM= 3.17 Transcript Type= NA chr12 70243433 70354258 70243433 70354258 + transcript2745.chr12.nic@CNOT2 transcript2745.chr12.nic protein_coding 70243433,70278132,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70337756,70338443,70338666,70342107,70342258,70344128,70346180,70353829 70243480,70278274,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70337820,70338563,70338822,70342168,70342307,70344228,70346324,70354258 Gene ID= ENSG00000111596.11 TPM= 1.97 Transcript Type= NA chr12 70243436 70354992 70243436 70354992 + transcript2748.chr12.nic@CNOT2 transcript2748.chr12.nic protein_coding 70243436,70278132,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344111,70346180,70353829 70243480,70278274,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354992 Gene ID= ENSG00000111596.11 TPM= 1.97 Transcript Type= NA chr12 70243440 70354258 70243440 70354258 + transcript2752.chr12.nic@CNOT2 transcript2752.chr12.nic protein_coding 70243440,70278132,70310895,70319298,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829 70243480,70278274,70311017,70319364,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354258 Gene ID= ENSG00000111596.11 TPM= 1.97 Transcript Type= NA chr12 70242994 70354992 70242994 70354992 + ENST00000229195.7@CNOT2 ENST00000229195.7 protein_coding 70242994,70278132,70310895,70319298,70329423,70330287,70332767,70335438,70337389,70338443,70338666,70342107,70342258,70344128,70346180,70353829 70243480,70278274,70311017,70319364,70329570,70330469,70332846,70335563,70337513,70338563,70338822,70342168,70342307,70344228,70346324,70354992 Gene ID= ENSG00000111596.11 TPM= 48.45 Transcript Type= protein_coding chr12 70366276 70434292 70366276 70434292 + ENST00000258111.4@KCNMB4 ENST00000258111.4 protein_coding 70366276,70400209,70430485 70367070,70400336,70434292 Gene ID= ENSG00000135643.4 TPM= 22.64 Transcript Type= protein_coding chr12 70515866 70637440 70515866 70637440 - ENST00000334414.10@PTPRB ENST00000334414.10 protein_coding 70637341,70635671,70622390,70609069,70596049,70594467,70592282,70589964,70587007,70581036,70576382,70571824,70571026,70569675,70566435,70562844,70560671,70559343,70555870,70555160,70552777,70544557,70540858,70539939,70539827,70539625,70538924,70538155,70536025,70534833,70534488,70532035,70524471,70515866 70637440,70636066,70622646,70609339,70596327,70594724,70592545,70590233,70587267,70581302,70576645,70572087,70571289,70569938,70566704,70563107,70560934,70559624,70556148,70555309,70553020,70544663,70540957,70540022,70539844,70539706,70539014,70538231,70536159,70534955,70534651,70532170,70524591,70521511 Gene ID= ENSG00000127329.15 TPM= 7.24 Transcript Type= protein_coding chr12 71125100 71158099 71125100 71158099 - ENST00000247829.7@TSPAN8 ENST00000247829.7 protein_coding 71157930,71157619,71144151,71139711,71138156,71137953,71132693,71129331,71125100 71158099,71157787,71144213,71139848,71138230,71138060,71132824,71129414,71125387 Gene ID= ENSG00000127324.8 TPM= 5.43 Transcript Type= protein_coding chr12 71439770 71586310 71439770 71586310 + ENST00000266674.9@LGR5 ENST00000266674.9 protein_coding 71439770,71504614,71524406,71535115,71553073,71556619,71559586,71561781,71566404,71566632,71566841,71571514,71572850,71577925,71578804,71580278,71582456,71583647 71440292,71504685,71524477,71535186,71553288,71556690,71559654,71561852,71566475,71566700,71566912,71571579,71572921,71577996,71578929,71580423,71582539,71586310 Gene ID= ENSG00000139292.12 TPM= 2.72 Transcript Type= protein_coding chr12 71663009 71680639 71663009 71680639 + ENST00000308086.2@THAP2 ENST00000308086.2 protein_coding 71663009,71674203,71676689 71664580,71674398,71680639 Gene ID= ENSG00000173451.6 TPM= 9.06 Transcript Type= protein_coding chr12 71686077 71704057 71686077 71704057 + transcript2768.chr12.nic@TMEM19 transcript2768.chr12.nic protein_coding 71686077,71689591,71696436,71697280,71698900,71700832,71703977 71686810,71689704,71696573,71697534,71699109,71700878,71704057 Gene ID= ENSG00000139291.13 TPM= 3.62 Transcript Type= NA chr12 71686077 71704055 71686077 71704055 + transcript2769.chr12.nic@TMEM19 transcript2769.chr12.nic protein_coding 71686077,71689591,71696436,71697280,71698900,71700832,71703977 71686810,71689704,71696573,71697534,71699109,71701025,71704055 Gene ID= ENSG00000139291.13 TPM= 1.81 Transcript Type= NA chr12 75391070 75432688 75391070 75432688 + ENST00000550916.5@GLIPR1L2 ENST00000550916.5 protein_coding 75391070,75410434,75413598,75422904,75430715,75430824 75391350,75410679,75413701,75422989,75430741,75432688 Gene ID= ENSG00000180481.10 TPM= 1.81 Transcript Type= protein_coding chr12 75391109 75424040 75391109 75424040 + ENST00000320460.8@GLIPR1L2 ENST00000320460.8 protein_coding 75391109,75410434,75413598,75422904 75391350,75410679,75413701,75424040 Gene ID= ENSG00000180481.10 TPM= 3.62 Transcript Type= protein_coding chr12 76025447 76033932 76025447 76033932 - ENST00000266671.9@PHLDA1 ENST00000266671.9 protein_coding 76030510,76025447 76033932,76030092 Gene ID= ENSG00000139289.13 TPM= 131.3 Transcript Type= protein_coding chr12 76046171 76084901 76046171 76084901 - transcript2798.chr12.nic@NAP1L1 transcript2798.chr12.nic protein_coding 76084567,76074203,76068909,76067371,76060138,76059798,76056033,76055019,76053770,76053205,76053091,76050531,76049756,76049200,76048421,76046171 76084901,76074239,76068994,76067473,76060279,76059878,76056161,76055090,76053909,76053350,76053110,76050653,76049785,76049250,76048464,76047718 Gene ID= ENSG00000187109.13 TPM= 12.68 Transcript Type= NA chr12 76344474 76348442 76344474 76348442 - ENST00000393262.3@BBS10 ENST00000393262.3 protein_coding 76348162,76344474 76348442,76347787 Gene ID= ENSG00000179941.6 TPM= 13.58 Transcript Type= protein_coding chr12 76355836 76559809 76355836 76559809 - ENST00000393250.8@OSBPL8 ENST00000393250.8 protein_coding 76559397,76487510,76450851,76410564,76402689,76399873,76397694,76394645,76392581,76390420,76389645,76386579,76386168,76384254,76378452,76375273,76373344,76371448,76369637,76369214,76358706,76356626,76355836 76559809,76487618,76450979,76410634,76402766,76399974,76397897,76394729,76392752,76390657,76389829,76386660,76386266,76384350,76378550,76375370,76373433,76371584,76369822,76369301,76358811,76356728,76356021 Gene ID= ENSG00000091039.16 TPM= 1.81 Transcript Type= protein_coding chr12 76858715 76879060 76858715 76879060 - ENST00000311083.9@CSRP2 ENST00000311083.9 protein_coding 76878938,76866149,76863176,76860284,76859547,76858715 76879060,76866261,76863344,76860413,76859640,76859028 Gene ID= ENSG00000175183.9 TPM= 4.53 Transcript Type= protein_coding chr12 79589334 79690595 79589334 79690595 - transcript2821.chr12.nic@PAWR transcript2821.chr12.nic protein_coding 79690556,79689729,79621076,79613575,79596511,79594329,79589334 79690595,79690391,79621207,79613609,79596658,79594433,79592693 Gene ID= ENSG00000177425.10 TPM= 4.07 Transcript Type= NA chr12 79589334 79690580 79589334 79690580 - transcript2823.chr12.nic@PAWR transcript2823.chr12.nic protein_coding 79689729,79621076,79613575,79596511,79594329,79589334 79690580,79621207,79613609,79596658,79594433,79592693 Gene ID= ENSG00000177425.10 TPM= 11.32 Transcript Type= NA chr12 79773570 79935138 79773570 79935138 - transcript2827.chr12.nic@PPP1R12A transcript2827.chr12.nic protein_coding 79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79805592,79798494,79797195,79796782,79795638,79793863,79790467,79788648,79786374,79781815,79778550,79773570 79935138,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806297,79805768,79798584,79797395,79796950,79795759,79793928,79790483,79788783,79786478,79781862,79778600,79776015 Gene ID= ENSG00000058272.16 TPM= 2.72 Transcript Type= NA chr12 79773568 79935198 79773568 79935198 - ENST00000450142.6@PPP1R12A ENST00000450142.6 protein_coding 79934695,79872808,79845302,79832332,79828320,79822116,79821078,79820774,79817394,79809795,79808483,79807226,79806166,79805592,79798494,79797195,79796782,79795638,79793863,79790467,79788648,79786374,79781815,79778550,79773568 79935198,79872938,79845420,79832491,79828464,79822190,79821166,79820931,79817518,79810010,79808577,79807330,79806333,79805768,79798584,79797395,79796950,79795759,79793928,79790483,79788783,79786478,79781862,79778600,79776015 Gene ID= ENSG00000058272.16 TPM= 12.68 Transcript Type= protein_coding chr12 79822829 79935192 79822829 79935192 - transcript2832.chr12.nic@PPP1R12A transcript2832.chr12.nic protein_coding 79934695,79872808,79845302,79832332,79822829 79935192,79872938,79845420,79832491,79828464 Gene ID= ENSG00000058272.16 TPM= 3.62 Transcript Type= NA chr12 81077211 81261205 81077211 81261205 + ENST00000548058.5@ACSS3 ENST00000548058.5 protein_coding 81077211,81109560,81134816,81139131,81143107,81151844,81152001,81174788,81199341,81216901,81220013,81231057,81233349,81253307,81253495,81254857 81078431,81109704,81135004,81139265,81143247,81151924,81152096,81174939,81199444,81216996,81220076,81231138,81233471,81253406,81253670,81261205 Gene ID= ENSG00000111058.7 TPM= 136.66 Transcript Type= protein_coding chr12 82352306 82358788 82352306 82358788 - ENST00000256151.7@CCDC59 ENST00000256151.7 protein_coding 82358223,82356960,82354495,82352306 82358788,82357269,82354594,82353312 Gene ID= ENSG00000133773.11 TPM= 8.15 Transcript Type= protein_coding chr12 82352851 82358396 82352851 82358396 - transcript2852.chr12.nic@CCDC59 transcript2852.chr12.nic protein_coding 82358223,82354495,82352851 82358396,82357269,82353312 Gene ID= ENSG00000133773.11 TPM= 1.81 Transcript Type= NA chr12 82352847 82358786 82352847 82358786 - ENST00000548126.1@CCDC59 ENST00000548126.1 protein_coding 82358679,82356960,82354495,82352847 82358786,82357269,82354594,82353312 Gene ID= ENSG00000133773.11 TPM= 6.34 Transcript Type= processed_transcript chr12 82358497 82479236 82358497 82479236 + ENST00000248306.7@METTL25 ENST00000248306.7 protein_coding 82358497,82386803,82389816,82398795,82402983,82430893,82434695,82438718,82456727,82476644,82477281,82478932 82358824,82386967,82389922,82399394,82403130,82430987,82434724,82438791,82456820,82476718,82477352,82479236 Gene ID= ENSG00000127720.7 TPM= 5.43 Transcript Type= protein_coding chr12 82686880 83134852 82686880 83134852 + ENST00000321196.7@TMTC2 ENST00000321196.7 protein_coding 82686880,82857010,82895818,82930431,82965024,82965560,82966919,82985925,83030798,83050904,83061768,83132210 82687669,82857580,82896646,82930545,82965109,82965744,82966997,82986046,83030879,83051018,83061831,83134852 Gene ID= ENSG00000179104.8 TPM= 1.81 Transcript Type= protein_coding chr12 85800697 85836570 85800697 85836570 - ENST00000361228.4@RASSF9 ENST00000361228.4 protein_coding 85836155,85800697 85836570,85805962 Gene ID= ENSG00000198774.4 TPM= 2.72 Transcript Type= protein_coding chr12 88035446 88050160 88035446 88050160 + ENST00000356891.3@C12orf29 ENST00000356891.3 protein_coding 88035446,88040148,88042825,88043599,88045582,88046807,88048234 88035738,88040265,88042920,88043715,88045779,88046976,88050160 Gene ID= ENSG00000133641.17 TPM= 8.15 Transcript Type= protein_coding chr12 88035505 88050158 88035505 88050158 + ENST00000550333.5@C12orf29 ENST00000550333.5 protein_coding 88035505,88042825,88043599,88045582,88046807,88048234 88035738,88042920,88043715,88045779,88046976,88050158 Gene ID= ENSG00000133641.17 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr12 88135853 88142092 88135853 88142092 - transcript2860.chr12.nic@CEP290 transcript2860.chr12.nic protein_coding 88141900,88141206,88140956,88139495,88139145,88135853 88142092,88141334,88141033,88139564,88139191,88136786 Gene ID= ENSG00000198707.14 TPM= 3.62 Transcript Type= NA chr12 89347232 89353271 89347232 89353271 - ENST00000279488.7@DUSP6 ENST00000279488.7 protein_coding 89351640,89350588,89347232 89353271,89351025,89349561 Gene ID= ENSG00000139318.7 TPM= 44.37 Transcript Type= protein_coding chr12 89419725 89526047 89419725 89526047 - transcript2868.chr12.nic@POC1B transcript2868.chr12.nic protein_coding 89525881,89525120,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419725 89526047,89525204,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257 Gene ID= ENSG00000139323.13 TPM= 3.02 Transcript Type= NA chr12 89419728 89525996 89419728 89525996 - transcript2870.chr12.nnic@POC1B transcript2870.chr12.nnic protein_coding 89525881,89525120,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89419728 89525996,89525204,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89421257 Gene ID= ENSG00000139323.13 TPM= 2.11 Transcript Type= NA chr12 89419718 89526024 89419718 89526024 - ENST00000313546.7@POC1B ENST00000313546.7 protein_coding 89525881,89525120,89497171,89491936,89472168,89471614,89470361,89467617,89466770,89459638,89425161,89419718 89526024,89525204,89497342,89492115,89472275,89471729,89470494,89467685,89466922,89459718,89425379,89421257 Gene ID= ENSG00000139323.13 TPM= 4.83 Transcript Type= protein_coding chr12 89588051 89709631 89588051 89709631 - transcript2880.chr12.nic@ATP2B1 transcript2880.chr12.nic protein_coding 89709219,89655679,89642158,89634997,89634778,89630505,89627678,89626454,89624183,89621549,89619999,89616802,89611193,89610421,89609937,89604155,89603712,89603043,89601326,89599117,89588051 89709631,89656107,89642355,89635251,89634903,89630645,89627716,89626615,89624397,89621791,89620240,89617039,89611372,89610508,89610043,89604346,89603925,89603254,89601433,89599299,89591295 Gene ID= ENSG00000070961.15 TPM= 18.11 Transcript Type= NA chr12 89589807 89708865 89589807 89708865 - transcript2883.chr12.nic@ATP2B1 transcript2883.chr12.nic protein_coding 89708596,89655679,89642158,89634997,89634778,89630505,89627678,89626454,89624183,89621549,89619999,89616802,89611193,89610421,89609937,89604155,89603712,89603043,89599117,89589807 89708865,89656107,89642355,89635251,89634903,89630645,89627716,89626615,89624397,89621791,89620240,89617039,89611372,89610508,89610043,89604346,89603925,89603254,89599299,89591295 Gene ID= ENSG00000070961.15 TPM= 1.81 Transcript Type= NA chr12 91102629 91111831 91102629 91111831 - ENST00000266718.4@LUM ENST00000266718.4 protein_coding 91111398,91108118,91102629 91111831,91109000,91104319 Gene ID= ENSG00000139329.4 TPM= 350.45 Transcript Type= protein_coding chr12 91145259 91179582 91145259 91179582 - ENST00000393155.5@DCN ENST00000393155.5 protein_coding 91179362,91178342,91164605,91158296,91157075,91153096,91151654,91145259 91179582,91178585,91164717,91158509,91157188,91153189,91151792,91146252 Gene ID= ENSG00000011465.16 TPM= 295.51 Transcript Type= protein_coding chr12 92140278 92145897 92140278 92145897 - ENST00000256015.4@BTG1 ENST00000256015.4 protein_coding 92145388,92140278 92145897,92144447 Gene ID= ENSG00000133639.4 TPM= 431.04 Transcript Type= protein_coding chr12 93377883 93408146 93377883 93408146 + ENST00000337179.9@NUDT4 ENST00000337179.9 protein_coding 93377883,93394609,93395489,93398768,93399177 93378421,93394719,93395533,93398855,93408146 Gene ID= ENSG00000173598.13 TPM= 136.28 Transcript Type= protein_coding chr12 93377896 93403248 93377896 93403248 + ENST00000415493.6@NUDT4 ENST00000415493.6 protein_coding 93377896,93394609,93395489,93398771,93399177 93378421,93394719,93395533,93398855,93403248 Gene ID= ENSG00000173598.13 TPM= 239.82 Transcript Type= protein_coding chr12 93378550 93402301 93378550 93402301 + ENST00000549992.5@NUDT4 ENST00000549992.5 protein_coding 93378550,93394609,93395489,93398771,93399177 93378790,93394719,93395533,93398855,93402301 Gene ID= ENSG00000173598.13 TPM= 10.26 Transcript Type= protein_coding chr12 93405690 93442262 93405690 93442262 - ENST00000318066.6@UBE2N ENST00000318066.6 protein_coding 93441855,93411053,93410734,93405690 93442262,93411299,93410874,93410079 Gene ID= ENSG00000177889.9 TPM= 83.31 Transcript Type= protein_coding chr12 93467488 93516213 93467488 93516213 + ENST00000549982.5@MRPL42 ENST00000549982.5 protein_coding 93467488,93469192,93476954,93479388,93487497,93501176 93467554,93469355,93477017,93479472,93487660,93516213 Gene ID= ENSG00000198015.12 TPM= 103.23 Transcript Type= protein_coding chr12 93677346 93850730 93677346 93850730 + transcript2941.chr12.nnic@CRADD transcript2941.chr12.nnic protein_coding 93677346,93678769,93798645,93849970 93677472,93679072,93798816,93850730 Gene ID= ENSG00000169372.12 TPM= 1.81 Transcript Type= NA chr12 93677375 93850736 93677375 93850736 + ENST00000332896.7@CRADD ENST00000332896.7 protein_coding 93677375,93678769,93849970 93677472,93679072,93850736 Gene ID= ENSG00000169372.12 TPM= 22.64 Transcript Type= protein_coding chr12 94148723 94307675 94148723 94307675 + ENST00000258526.8@PLXNC1 ENST00000258526.8 protein_coding 94148723,94169153,94181446,94186373,94209590,94220016,94224228,94226605,94227149,94237664,94240485,94243938,94247903,94248227,94251426,94254787,94255193,94259337,94259610,94260642,94265079,94279472,94282298,94294486,94297189,94297316,94298632,94300910,94303756,94303977,94305181 94150033,94169293,94181580,94186473,94209704,94220163,94224315,94226707,94227235,94237803,94240664,94244025,94248106,94248412,94251528,94254888,94255296,94259375,94259734,94260840,94265225,94279649,94282401,94294540,94297220,94297423,94298795,94301057,94303896,94304051,94307675 Gene ID= ENSG00000136040.8 TPM= 2.72 Transcript Type= protein_coding chr12 94308280 94459946 94308280 94459946 - ENST00000339839.9@CEP83 ENST00000339839.9 protein_coding 94459557,94412318,94411697,94403170,94400850,94378791,94375886,94369922,94368057,94367794,94335589,94333482,94331700,94312914,94309918,94308280 94459946,94412591,94411847,94403262,94400981,94379042,94376017,94370036,94368201,94367943,94335664,94333639,94331829,94313017,94310107,94308917 Gene ID= ENSG00000173588.14 TPM= 5.43 Transcript Type= protein_coding chr12 94567124 94650562 94567124 94650562 - ENST00000261226.8@TMCC3 ENST00000261226.8 protein_coding 94650353,94581622,94578394,94567124 94650562,94582538,94578529,94571737 Gene ID= ENSG00000057704.12 TPM= 7.24 Transcript Type= protein_coding chr12 94971336 95003713 94971336 95003713 - ENST00000547986.5@NDUFA12 ENST00000547986.5 protein_coding 95003595,95002739,94971336 95003713,95002821,94971620 Gene ID= ENSG00000184752.12 TPM= 1.81 Transcript Type= protein_coding chr12 95020229 95073703 95020229 95073703 - ENST00000333003.9@NR2C1 ENST00000333003.9 protein_coding 95073380,95067331,95062508,95059906,95058310,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95020229 95073703,95067391,95062738,95059984,95058489,95057878,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403 Gene ID= ENSG00000120798.16 TPM= 11.77 Transcript Type= protein_coding chr12 95021894 95073650 95021894 95073650 - transcript2970.chr12.nic@NR2C1 transcript2970.chr12.nic protein_coding 95073380,95067331,95062508,95059906,95057731,95057553,95051762,95049068,95040476,95031349,95028387,95025150,95021894 95073650,95067391,95062738,95059984,95058489,95057643,95051943,95049233,95040597,95031488,95028524,95025255,95022403 Gene ID= ENSG00000120798.16 TPM= 4.53 Transcript Type= NA chr12 95217807 95301621 95217807 95301621 + transcript2981.chr12.nic@VEZT transcript2981.chr12.nic protein_coding 95217807,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95298862,95300165 95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95298943,95301621 Gene ID= ENSG00000028203.17 TPM= 1.81 Transcript Type= NA chr12 95217824 95302589 95217824 95302589 + transcript2982.chr12.nic@VEZT transcript2982.chr12.nic protein_coding 95217824,95224180,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165 95217886,95224236,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302589 Gene ID= ENSG00000028203.17 TPM= 2.56 Transcript Type= NA chr12 95217746 95302790 95217746 95302790 + ENST00000436874.5@VEZT ENST00000436874.5 protein_coding 95217746,95251940,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165 95217886,95252071,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302790 Gene ID= ENSG00000028203.17 TPM= 16.15 Transcript Type= protein_coding chr12 95217811 95302699 95217811 95302699 + transcript2991.chr12.nic@VEZT transcript2991.chr12.nic protein_coding 95217811,95251940,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165 95217886,95252071,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95302699 Gene ID= ENSG00000028203.17 TPM= 2.56 Transcript Type= NA chr12 95217761 95301172 95217761 95301172 + ENST00000547997.5@VEZT ENST00000547997.5 protein_coding 95217761,95251940,95256550,95257150,95262906,95266357,95270051,95274742,95282313,95287664,95294272,95296051,95300165 95217886,95252071,95256622,95257239,95263081,95266632,95270188,95274889,95282644,95287857,95294372,95296258,95301172 Gene ID= ENSG00000028203.17 TPM= 12.22 Transcript Type= nonsense_mediated_decay chr12 95473951 95515839 95473951 95515839 + ENST00000323666.9@METAP2 ENST00000323666.9 protein_coding 95473951,95476071,95483215,95485879,95494056,95494957,95496004,95504065,95511895,95512801,95513652 95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95515839 Gene ID= ENSG00000111142.13 TPM= 132.66 Transcript Type= protein_coding chr12 95474081 95514299 95474081 95514299 + ENST00000546753.5@METAP2 ENST00000546753.5 protein_coding 95474081,95476071,95483215,95485948,95494056,95494957,95496004,95504065,95511895,95512801,95513652 95474330,95476178,95483280,95485981,95494217,95495138,95496098,95504161,95511998,95512916,95514299 Gene ID= ENSG00000111142.13 TPM= 2.26 Transcript Type= protein_coding chr12 95657808 95790191 95657808 95790191 - transcript3015.chr12.nic@NTN4 transcript3015.chr12.nic protein_coding 95789786,95786939,95737866,95713212,95710441,95683498,95682707,95670078,95665810,95657808 95790191,95787468,95738144,95713338,95710629,95683711,95682822,95670146,95665980,95659222 Gene ID= ENSG00000074527.11 TPM= 4.23 Transcript Type= NA chr12 95657807 95790758 95657807 95790758 - ENST00000343702.8@NTN4 ENST00000343702.8 protein_coding 95790255,95786939,95737866,95713212,95710441,95683498,95682707,95670078,95665810,95657807 95790758,95787468,95738144,95713338,95710629,95683711,95682822,95670146,95665980,95659222 Gene ID= ENSG00000074527.11 TPM= 90.26 Transcript Type= protein_coding chr12 95858928 95867053 95858928 95867053 + ENST00000266735.9@SNRPF ENST00000266735.9 protein_coding 95858928,95861168,95865324,95866005 95859076,95861293,95865388,95867053 Gene ID= ENSG00000139343.10 TPM= 38.94 Transcript Type= protein_coding chr12 95943062 95968591 95943062 95968591 + transcript3024.chr12.nnic@AMDHD1 transcript3024.chr12.nnic protein_coding 95943062,95956685,95960398,95962355,95965686,95966348,95967756 95943535,95956962,95960623,95962479,95965779,95966508,95968591 Gene ID= ENSG00000139344.7 TPM= 2.26 Transcript Type= NA chr12 95943293 95968716 95943293 95968716 + ENST00000266736.6@AMDHD1 ENST00000266736.6 protein_coding 95943293,95952717,95954911,95956685,95960398,95962355,95965686,95966348,95967756 95943535,95952823,95954975,95956962,95960623,95962479,95965779,95966508,95968716 Gene ID= ENSG00000139344.7 TPM= 22.19 Transcript Type= protein_coding chr12 96000830 96035670 96000830 96035670 - transcript3026.chr12.nic@LTA4H transcript3026.chr12.nic protein_coding 96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96002960,96000830 96035670,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003064,96001106 Gene ID= ENSG00000111144.9 TPM= 18.56 Transcript Type= NA chr12 96000828 96035661 96000828 96035661 - ENST00000228740.6@LTA4H ENST00000228740.6 protein_coding 96035361,96029055,96027444,96024479,96022147,96021085,96019168,96018763,96017557,96017044,96015583,96014855,96013750,96013188,96009094,96006314,96003838,96002960,96000828 96035661,96029185,96027564,96024547,96022251,96021137,96019240,96018903,96017580,96017114,96015694,96014999,96013853,96013258,96009148,96006409,96003920,96003064,96001106 Gene ID= ENSG00000111144.9 TPM= 136.28 Transcript Type= protein_coding chr12 96194382 96269835 96194382 96269835 + ENST00000228741.7@ELK3 ENST00000228741.7 protein_coding 96194382,96223565,96246940,96259731,96267082 96194705,96223773,96247734,96259853,96269835 Gene ID= ENSG00000111145.7 TPM= 28.07 Transcript Type= protein_coding chr12 96907223 96953777 96907223 96953777 + ENST00000266742.8@NEDD1 ENST00000266742.8 protein_coding 96907223,96907604,96909752,96912723,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949 96907300,96907856,96909895,96912817,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953777 Gene ID= ENSG00000139350.11 TPM= 6.34 Transcript Type= protein_coding chr12 96907240 96953777 96907240 96953777 + transcript3048.chr12.nnic@NEDD1 transcript3048.chr12.nnic protein_coding 96907240,96917621,96919985,96934976,96936611,96937198,96940409,96942577,96943560,96944639,96945693,96951432,96951949 96907300,96917737,96920125,96935205,96936812,96937393,96940537,96942624,96943762,96944795,96945849,96951498,96953777 Gene ID= ENSG00000139350.11 TPM= 1.81 Transcript Type= NA chr12 98515630 98535634 98515630 98535634 + ENST00000266732.8@TMPO ENST00000266732.8 protein_coding 98515630,98527886,98531680,98532823 98516146,98528012,98531838,98535634 Gene ID= ENSG00000120802.13 TPM= 16.3 Transcript Type= protein_coding chr12 98593581 98606376 98593581 98606376 + transcript3059.chr12.nnic@SLC25A3 transcript3059.chr12.nnic protein_coding 98593581,98593975,98595727,98597856,98598522,98599955,98601171,98601368,98604245 98593740,98594135,98595848,98598035,98598703,98600127,98601281,98602164,98606376 Gene ID= ENSG00000075415.12 TPM= 566.87 Transcript Type= NA chr12 98613405 98645113 98613405 98645113 - ENST00000342502.6@IKBIP ENST00000342502.6 protein_coding 98644523,98634296,98613405 98645113,98634413,98614340 Gene ID= ENSG00000166130.14 TPM= 5.43 Transcript Type= protein_coding chr12 98744589 98894868 98744589 98894868 - transcript3070.chr12.nic@ANKS1B transcript3070.chr12.nic protein_coding 98894630,98832029,98829174,98800997,98798934,98782126,98781117,98773042,98751355,98744589 98894868,98832136,98829353,98801125,98799005,98782137,98781203,98773179,98751522,98745846 Gene ID= ENSG00000185046.18 TPM= 3.62 Transcript Type= NA chr12 100036932 100142876 100036932 100142876 - transcript3077.chr12.nnic@UHRF1BP1L transcript3077.chr12.nnic protein_coding 100142592,100108386,100103913,100102766,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057571,100051079,100050168,100047943,100047530,100039596,100036932 100142876,100108548,100103951,100102857,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746,100051221,100050318,100048196,100047638,100039789,100037755 Gene ID= ENSG00000111647.12 TPM= 2.72 Transcript Type= NA chr12 100037076 100142848 100037076 100142848 - ENST00000279907.11@UHRF1BP1L ENST00000279907.11 protein_coding 100142592,100108386,100103913,100102766,100098352,100097365,100095667,100088915,100086275,100084476,100083016,100072672,100059850,100058029,100057571,100051079,100050168,100047943,100047530,100039596,100037076 100142848,100108548,100103951,100102857,100098541,100097505,100095837,100089095,100086358,100084658,100083134,100072813,100060043,100059533,100057746,100051221,100050318,100048196,100047638,100039789,100037755 Gene ID= ENSG00000111647.12 TPM= 9.06 Transcript Type= protein_coding chr12 100200087 100224423 100200087 100224423 + ENST00000188312.6@ACTR6 ENST00000188312.6 protein_coding 100200087,100204940,100205676,100207663,100210073,100210295,100212256,100212450,100218415,100220008,100223786 100200919,100205057,100205744,100207786,100210208,100210351,100212354,100212528,100218586,100220146,100224423 Gene ID= ENSG00000075089.9 TPM= 20.83 Transcript Type= protein_coding chr12 100267384 100341724 100267384 100341724 + ENST00000360820.6@SCYL2 ENST00000360820.6 protein_coding 100267384,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528 100267792,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100341724 Gene ID= ENSG00000136021.18 TPM= 24.9 Transcript Type= protein_coding chr12 100267246 100340139 100267246 100340139 + ENST00000635101.1@SCYL2 ENST00000635101.1 protein_coding 100267246,100282943,100291503,100298031,100311044,100312432,100313422,100314489,100315558,100317681,100317803,100323525,100326622,100329201,100334166,100335625,100335811,100337387,100338528 100267396,100283147,100291660,100298175,100311193,100312653,100313538,100314614,100315734,100317692,100317925,100323638,100326754,100329319,100334266,100335691,100335906,100337506,100340139 Gene ID= ENSG00000136021.18 TPM= 4.07 Transcript Type= protein_coding chr12 100473708 100564413 100473708 100564413 + ENST00000548884.5@NR1H4 ENST00000548884.5 protein_coding 100473708,100492503,100493270,100510778,100532458,100534890,100536512,100536948,100540672,100561885,100563251 100474059,100492637,100493402,100511143,100532598,100535023,100536610,100537047,100540818,100561998,100564413 Gene ID= ENSG00000012504.13 TPM= 12.68 Transcript Type= protein_coding chr12 100473955 100505766 100473955 100505766 + ENST00000546380.1@NR1H4 ENST00000546380.1 protein_coding 100473955,100492503,100493270,100505575 100474059,100492637,100493402,100505766 Gene ID= ENSG00000012504.13 TPM= 1.81 Transcript Type= protein_coding chr12 100794560 101128636 100794560 101128636 + transcript3102.chr12.nnic@ANO4 transcript3102.chr12.nnic protein_coding 100794560,100901646,100939315,100942377,100971306,100987539,101020034,101037095,101039955,101042334,101043539,101048341,101079193,101083678,101086660,101094256,101096536,101097651,101097848,101099578,101110404,101111563,101116679,101120520,101126879,101127861 100795027,100901840,100939451,100942535,100971406,100987670,101020140,101037150,101040076,101042468,101043635,101048401,101079275,101083818,101086824,101094292,101096647,101097708,101097945,101099720,101110556,101111710,101116798,101120625,101127074,101128636 Gene ID= ENSG00000151572.16 TPM= 4.98 Transcript Type= NA chr12 100794807 101128641 100794807 101128641 + ENST00000392979.7@ANO4 ENST00000392979.7 protein_coding 100794807,100901646,100939315,100942377,100971306,100974845,100987539,101020034,101037095,101039955,101042334,101043539,101048341,101079193,101083678,101086660,101094256,101096536,101097651,101097848,101099578,101110404,101111563,101116679,101120520,101126879,101127861 100795027,100901840,100939451,100942535,100971406,100974889,100987670,101020140,101037150,101040076,101042468,101043635,101048401,101079275,101083818,101086824,101094292,101096647,101097708,101097945,101099720,101110556,101111710,101116798,101120625,101127074,101128641 Gene ID= ENSG00000151572.16 TPM= 1.36 Transcript Type= protein_coding chr12 101280109 101386616 101280109 101386616 + ENST00000261637.4@UTP20 ENST00000261637.4 protein_coding 101280109,101281116,101285570,101285749,101286321,101288960,101290137,101290733,101291742,101291970,101293168,101295480,101299682,101299973,101302448,101305915,101306699,101308185,101309763,101311719,101312036,101317478,101319545,101320852,101321504,101327081,101329241,101333301,101334425,101338051,101338813,101340523,101342446,101342787,101342941,101344595,101345554,101346451,101352055,101353047,101354832,101356554,101356926,101361962,101363576,101365459,101366558,101367860,101369721,101370432,101371058,101372884,101373401,101373585,101374808,101375624,101379371,101381140,101383041,101383543,101385583,101385968 101280327,101281196,101285636,101285881,101286509,101289041,101290274,101290888,101291888,101292104,101293245,101295658,101299837,101300061,101302553,101306065,101306761,101308343,101309839,101311798,101312276,101317663,101319635,101320937,101321629,101327247,101329449,101333444,101334504,101338277,101338957,101340610,101342589,101342837,101343093,101344750,101345694,101346588,101352194,101353129,101355118,101356693,101357082,101362060,101363743,101365625,101366699,101367976,101369891,101370563,101371168,101372963,101373470,101373767,101374939,101375756,101379558,101381211,101383313,101383669,101385728,101386616 Gene ID= ENSG00000120800.4 TPM= 4.53 Transcript Type= protein_coding chr12 101393120 101407820 101393120 101407820 - ENST00000261636.12@ARL1 ENST00000261636.12 protein_coding 101407642,101405844,101402865,101401062,101396399,101393120 101407820,101405981,101402946,101401173,101396577,101395670 Gene ID= ENSG00000120805.13 TPM= 148.51 Transcript Type= protein_coding chr12 101697634 101729073 101697634 101729073 + transcript3126.chr12.nnic@CHPT1 transcript3126.chr12.nnic protein_coding 101697634,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901 101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726497,101729073 Gene ID= ENSG00000111666.10 TPM= 9.96 Transcript Type= NA chr12 101697627 101729074 101697627 101729074 + ENST00000229266.7@CHPT1 ENST00000229266.7 protein_coding 101697627,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728901 101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726404,101729074 Gene ID= ENSG00000111666.10 TPM= 152.13 Transcript Type= protein_coding chr12 101697672 101727039 101697672 101727039 + ENST00000549872.5@CHPT1 ENST00000549872.5 protein_coding 101697672,101714090,101714504,101716728,101720123,101723168,101723722,101726294 101698134,101714237,101714645,101716812,101720254,101723326,101723847,101727039 Gene ID= ENSG00000111666.10 TPM= 24.45 Transcript Type= protein_coding chr12 101697692 101729016 101697692 101729016 + ENST00000549128.5@CHPT1 ENST00000549128.5 protein_coding 101697692,101714090,101714504,101716728,101720123,101723168,101723722,101726294,101728908 101698134,101714237,101714645,101716812,101720254,101723326,101723847,101726501,101729016 Gene ID= ENSG00000111666.10 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr12 101756216 101830957 101756216 101830957 - transcript3113.chr12.nic@GNPTAB transcript3113.chr12.nic protein_coding 101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101766091,101764202,101761564,101761127,101760030,101757572,101757212,101756216 101830957,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294,101765304,101761763,101761346,101760143,101757657,101757310,101756566 Gene ID= ENSG00000111670.14 TPM= 2.72 Transcript Type= NA chr12 101765763 101830855 101765763 101830855 - transcript3118.chr12.nic@GNPTAB transcript3118.chr12.nic protein_coding 101830559,101796677,101789938,101788548,101786012,101780557,101780152,101770996,101770406,101770021,101768037,101765763 101830855,101796762,101790057,101788589,101786217,101780621,101780286,101771157,101770585,101770191,101768160,101766294 Gene ID= ENSG00000111670.14 TPM= 3.62 Transcript Type= NA chr12 101877457 101923622 101877457 101923622 + transcript3139.chr12.nnic@DRAM1 transcript3139.chr12.nnic protein_coding 101877457,101890100,101897863,101901291,101908186,101914174,101920109,101921216 101877920,101890221,101897930,101901433,101908363,101914232,101920201,101923622 Gene ID= ENSG00000136048.13 TPM= 7.24 Transcript Type= NA chr12 101877332 101923621 101877332 101923621 + transcript3141.chr12.nnic@DRAM1 transcript3141.chr12.nnic protein_coding 101877332,101897863,101901291,101908186,101914174,101921216 101877920,101897930,101901433,101908363,101914232,101923621 Gene ID= ENSG00000136048.13 TPM= 1.81 Transcript Type= NA chr12 101877413 101923622 101877413 101923622 + transcript3144.chr12.nnic@DRAM1 transcript3144.chr12.nnic protein_coding 101877413,101897863,101901291,101920109,101921216 101877920,101897930,101901433,101920201,101923622 Gene ID= ENSG00000136048.13 TPM= 12.68 Transcript Type= NA chr12 101877351 101923623 101877351 101923623 + ENST00000258534.12@DRAM1 ENST00000258534.12 protein_coding 101877351,101897863,101901291,101908186,101914174,101920109,101921216 101877920,101897930,101901433,101908363,101914232,101920201,101923623 Gene ID= ENSG00000136048.13 TPM= 61.58 Transcript Type= protein_coding chr12 102012939 102062124 102012939 102062124 - ENST00000240079.10@WASHC3 ENST00000240079.10 protein_coding 102061912,102061248,102046054,102044105,102039868,102025974,102012939 102062124,102061346,102046119,102044212,102039978,102026038,102013192 Gene ID= ENSG00000120860.10 TPM= 46.18 Transcript Type= protein_coding chr12 102073103 102120124 102073103 102120124 - ENST00000552283.5@NUP37 ENST00000552283.5 protein_coding 102120050,102118363,102112108,102101032,102099106,102085766,102077322,102076797,102075001,102073103 102120124,102118583,102112232,102101104,102099200,102085856,102077503,102076847,102075094,102074467 Gene ID= ENSG00000075188.8 TPM= 11.77 Transcript Type= protein_coding chr12 102395874 102480645 102395874 102480645 - ENST00000337514.10@IGF1 ENST00000337514.10 protein_coding 102480319,102475643,102419509,102395874 102480645,102475799,102419690,102402566 Gene ID= ENSG00000017427.15 TPM= 4.53 Transcript Type= protein_coding chr12 102417491 102480563 102417491 102480563 - ENST00000307046.8@IGF1 ENST00000307046.8 protein_coding 102480319,102475643,102419509,102417491 102480563,102475799,102419690,102418003 Gene ID= ENSG00000017427.15 TPM= 1.81 Transcript Type= protein_coding chr12 102836885 102917603 102836885 102917603 - ENST00000553106.5@PAH ENST00000553106.5 protein_coding 102917071,102912791,102894735,102877462,102866596,102855136,102852815,102851687,102846895,102844336,102843646,102840400,102836885 102917603,102912898,102894918,102877550,102866663,102855332,102852950,102851756,102846951,102844431,102843779,102840515,102839218 Gene ID= ENSG00000171759.9 TPM= 5.43 Transcript Type= protein_coding chr12 103930334 103947926 103930334 103947926 + ENST00000299767.9@HSP90B1 ENST00000299767.9 protein_coding 103930334,103931521,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103943738,103946618,103946786,103947311,103947633 103930564,103931623,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943319,103943874,103946696,103946941,103947430,103947926 Gene ID= ENSG00000166598.14 TPM= 366.29 Transcript Type= protein_coding chr12 103930350 103947926 103930350 103947926 + transcript3173.chr12.nic@HSP90B1 transcript3173.chr12.nic protein_coding 103930350,103931521,103932277,103932826,103933956,103937695,103938340,103939509,103941410,103941629,103941832,103942527,103943074,103946618,103946786,103947311,103947633 103930564,103931623,103932418,103932942,103934287,103937806,103938459,103939625,103941547,103941706,103941897,103942796,103943874,103946696,103946941,103947430,103947926 Gene ID= ENSG00000166598.14 TPM= 15.85 Transcript Type= NA chr12 103950207 103957264 103950207 103957264 - ENST00000378090.8@C12orf73 ENST00000378090.8 protein_coding 103957069,103956631,103950207 103957264,103956748,103951630 Gene ID= ENSG00000204954.9 TPM= 5.43 Transcript Type= protein_coding chr12 103950740 103957181 103950740 103957181 - ENST00000547975.5@C12orf73 ENST00000547975.5 protein_coding 103957069,103956631,103953414,103950740 103957181,103956748,103953534,103951630 Gene ID= ENSG00000204954.9 TPM= 2.72 Transcript Type= protein_coding chr12 103965813 103988867 103965813 103988867 + transcript3187.chr12.nic@TDG transcript3187.chr12.nic protein_coding 103965813,103976918,103979831,103980893,103982799,103983295,103984749,103985603,103986948 103966060,103977060,103980072,103980962,103982934,103983389,103984920,103985728,103988867 Gene ID= ENSG00000139372.14 TPM= 3.08 Transcript Type= NA chr12 103965813 103988870 103965813 103988870 + transcript3188.chr12.nic@TDG transcript3188.chr12.nic protein_coding 103965813,103976918,103979831,103982799,103983136,103983295,103984749,103985603,103986948 103966060,103977060,103980962,103982934,103983218,103983389,103984920,103985728,103988870 Gene ID= ENSG00000139372.14 TPM= 2.17 Transcript Type= NA chr12 103965813 103988864 103965813 103988864 + transcript3191.chr12.nic@TDG transcript3191.chr12.nic protein_coding 103965813,103976918,103979831,103980893,103982799,103984749,103985603,103986948 103966060,103977060,103980072,103980962,103983389,103984920,103985728,103988864 Gene ID= ENSG00000139372.14 TPM= 2.17 Transcript Type= NA chr12 103965813 103988811 103965813 103988811 + transcript3194.chr12.nic@TDG transcript3194.chr12.nic protein_coding 103965813,103976918,103979831,103982799,103984749,103985603,103986948 103966060,103977060,103980962,103983389,103984920,103985728,103988811 Gene ID= ENSG00000139372.14 TPM= 2.17 Transcript Type= NA chr12 103965804 103988874 103965804 103988874 + ENST00000392872.7@TDG ENST00000392872.7 protein_coding 103965804,103976918,103979831,103980893,103982799,103983136,103983295,103984749,103985603,103986948 103966060,103977060,103980072,103980962,103982934,103983218,103983389,103984920,103985728,103988874 Gene ID= ENSG00000139372.14 TPM= 38.4 Transcript Type= protein_coding chr12 103988984 104050137 103988984 104050137 - ENST00000360814.8@GLT8D2 ENST00000360814.8 protein_coding 104049895,104021357,104019630,104015013,104003135,103999397,103997451,103996735,103994335,103993392,103988984 104050137,104021491,104019676,104015105,104003306,103999514,103997535,103996847,103994501,103993504,103989577 Gene ID= ENSG00000120820.12 TPM= 14.49 Transcript Type= protein_coding chr12 104064457 104106524 104064457 104106524 + ENST00000229330.8@HCFC2 ENST00000229330.8 protein_coding 104064457,104066167,104067947,104079445,104080746,104082500,104082713,104086847,104087986,104093386,104095360,104096360,104098343,104101968,104102959 104064723,104066315,104068107,104079653,104080830,104082606,104082901,104087014,104088038,104093563,104095563,104096433,104098480,104102153,104106524 Gene ID= ENSG00000111727.11 TPM= 24.45 Transcript Type= protein_coding chr12 104117783 104138113 104117783 104138113 - transcript3203.chr12.nic@NFYB transcript3203.chr12.nic protein_coding 104137376,104135448,104131754,104128424,104126114,104123226,104121240,104120400,104117783 104138113,104135532,104131838,104128517,104126244,104123423,104121321,104120479,104119769 Gene ID= ENSG00000120837.7 TPM= 8.41 Transcript Type= NA chr12 104117080 104138291 104117080 104138291 - transcript3204.chr12.nic@NFYB transcript3204.chr12.nic protein_coding 104138141,104135448,104131754,104128424,104126114,104123226,104121240,104120400,104117080 104138291,104135532,104131838,104128517,104126244,104123423,104121321,104120479,104119769 Gene ID= ENSG00000120837.7 TPM= 7.51 Transcript Type= NA chr12 104118090 104138096 104118090 104138096 - transcript3206.chr12.nnic@NFYB transcript3206.chr12.nnic protein_coding 104137345,104135448,104128424,104126114,104123226,104121240,104120400,104118090 104138096,104135532,104128517,104126244,104123423,104121321,104120479,104119769 Gene ID= ENSG00000120837.7 TPM= 14.3 Transcript Type= NA chr12 104117077 104138289 104117077 104138289 - ENST00000240055.7@NFYB ENST00000240055.7 protein_coding 104138141,104135448,104128424,104126114,104123226,104121240,104120400,104117077 104138289,104135532,104128517,104126244,104123423,104121321,104120479,104119769 Gene ID= ENSG00000120837.7 TPM= 50.52 Transcript Type= protein_coding chr12 104117959 104138291 104117959 104138291 - transcript3211.chr12.nnic@NFYB transcript3211.chr12.nnic protein_coding 104138141,104135448,104128424,104123226,104121240,104120400,104117959 104138291,104135532,104128517,104123423,104121321,104120479,104119769 Gene ID= ENSG00000120837.7 TPM= 2.98 Transcript Type= NA chr12 104119355 104138017 104119355 104138017 - ENST00000551727.5@NFYB ENST00000551727.5 protein_coding 104137376,104135448,104128424,104126114,104123226,104121240,104120400,104119355 104138017,104135532,104128517,104126244,104123423,104121321,104120479,104119769 Gene ID= ENSG00000120837.7 TPM= 8.15 Transcript Type= protein_coding chr12 104286943 104350284 104286943 104350284 + transcript3231.chr12.nic@TXNRD1 transcript3231.chr12.nic protein_coding 104286943,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353 104287109,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350284 Gene ID= ENSG00000198431.15 TPM= 40.59 Transcript Type= NA chr12 104286958 104350284 104286958 104350284 + transcript3232.chr12.nic@TXNRD1 transcript3232.chr12.nic protein_coding 104286958,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353 104287346,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350284 Gene ID= ENSG00000198431.15 TPM= 22.48 Transcript Type= NA chr12 104288716 104350497 104288716 104350497 + transcript3235.chr12.nic@TXNRD1 transcript3235.chr12.nic protein_coding 104288716,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353 104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350497 Gene ID= ENSG00000198431.15 TPM= 44.21 Transcript Type= NA chr12 104215779 104350283 104215779 104350283 + ENST00000525566.5@TXNRD1 ENST00000525566.5 protein_coding 104215779,104251527,104258019,104288931,104311290,104313245,104315777,104318913,104319470,104321091,104325337,104326347,104327515,104331534,104334237,104339139,104348353 104215893,104251678,104258079,104289040,104311412,104313317,104315896,104319055,104319585,104321316,104325429,104326423,104327671,104331641,104334332,104339273,104350283 Gene ID= ENSG00000198431.15 TPM= 21.57 Transcript Type= protein_coding chr12 104262314 104280722 104262314 104280722 - ENST00000549807.1@AC089983.1 ENST00000549807.1 antisense_RNA 104280284,104262314 104280722,104262575 Gene ID= ENSG00000257732.1 TPM= 1.81 Transcript Type= antisense_RNA chr12 104601490 104758111 104601490 104758111 + transcript3245.chr12.nnic@CHST11 transcript3245.chr12.nnic protein_coding 104601490,104601906,104756949 104601609,104601991,104758111 Gene ID= ENSG00000171310.10 TPM= 4.53 Transcript Type= NA chr12 104802357 104958316 104802357 104958316 - transcript3250.chr12.nic@SLC41A2 transcript3250.chr12.nic protein_coding 104958088,104927973,104909655,104895274,104889033,104886293,104866432,104861291,104845843,104844472,104802357 104958316,104928694,104909762,104895345,104889177,104886439,104866579,104861370,104845974,104844620,104805337 Gene ID= ENSG00000136052.9 TPM= 5.43 Transcript Type= NA chr12 104802357 104958588 104802357 104958588 - transcript3251.chr12.nic@SLC41A2 transcript3251.chr12.nic protein_coding 104958190,104927973,104909655,104895274,104889033,104886293,104866432,104861291,104845843,104844472,104802357 104958588,104928694,104909762,104895345,104889177,104886439,104866579,104861370,104845974,104844620,104805337 Gene ID= ENSG00000136052.9 TPM= 2.72 Transcript Type= NA chr12 104802357 104958777 104802357 104958777 - transcript3252.chr12.nnic@SLC41A2 transcript3252.chr12.nnic protein_coding 104958601,104927973,104909655,104895274,104889033,104886293,104866432,104861291,104845843,104844472,104802357 104958777,104928694,104909762,104895345,104889177,104886439,104866579,104861370,104845974,104844620,104805337 Gene ID= ENSG00000136052.9 TPM= 2.72 Transcript Type= NA chr12 105107714 105169134 105107714 105169134 + ENST00000332180.9@WASHC4 ENST00000332180.9 protein_coding 105107714,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864 105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169134 Gene ID= ENSG00000136051.13 TPM= 30.18 Transcript Type= protein_coding chr12 105107771 105169134 105107771 105169134 + transcript3258.chr12.nnic@WASHC4 transcript3258.chr12.nnic protein_coding 105107771,105111001,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864 105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133896,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169134 Gene ID= ENSG00000136051.13 TPM= 2.11 Transcript Type= NA chr12 105107714 105169126 105107714 105169126 + ENST00000620430.4@WASHC4 ENST00000620430.4 protein_coding 105107714,105111125,105114216,105114362,105115184,105115661,105118446,105120555,105121101,105122118,105126004,105126235,105127129,105133770,105137886,105140294,105140899,105141167,105142453,105143127,105144287,105144718,105146452,105147042,105149615,105152343,105156726,105157236,105160001,105162749,105164111,105164641,105166864 105107861,105111264,105114269,105114427,105115229,105115728,105118528,105120597,105121204,105122238,105126127,105126362,105127289,105133899,105138011,105140401,105141045,105141246,105142558,105143243,105144455,105144872,105146526,105147146,105149749,105152451,105156792,105157322,105160148,105162845,105164307,105164740,105169126 Gene ID= ENSG00000136051.13 TPM= 1.2 Transcript Type= protein_coding chr12 105173296 105236238 105173296 105236238 - ENST00000258530.7@APPL2 ENST00000258530.7 protein_coding 105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176876,105176035,105173296 105236238,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105177016,105176082,105174448 Gene ID= ENSG00000136044.11 TPM= 125.15 Transcript Type= protein_coding chr12 105173293 105236222 105173293 105236222 - transcript3272.chr12.nnic@APPL2 transcript3272.chr12.nnic protein_coding 105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105189991,105189772,105188273,105177226,105176876,105176035,105173293 105236222,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105190155,105189824,105188447,105177262,105177016,105176082,105174448 Gene ID= ENSG00000136044.11 TPM= 5.01 Transcript Type= NA chr12 105173293 105236222 105173293 105236222 - transcript3274.chr12.nnic@APPL2 transcript3274.chr12.nnic protein_coding 105235959,105229125,105217666,105217069,105211230,105208158,105207971,105207061,105203703,105199373,105197765,105195585,105195445,105195261,105189991,105189772,105188273,105177226,105176035,105173293 105236222,105229223,105217725,105217140,105211317,105208199,105208029,105207207,105203785,105199531,105197953,105195627,105195501,105195349,105190155,105189824,105188447,105177262,105176082,105174448 Gene ID= ENSG00000136044.11 TPM= 8.45 Transcript Type= NA chr12 106237875 106248144 106237875 106248144 - transcript3288.chr12.nnic@CKAP4 transcript3288.chr12.nnic protein_coding 106247859,106247369,106237875 106248144,106247570,106240349 Gene ID= ENSG00000136026.13 TPM= 14.49 Transcript Type= NA chr12 106237875 106247992 106237875 106247992 - transcript3289.chr12.nnic@CKAP4 transcript3289.chr12.nnic protein_coding 106247738,106247369,106237875 106247992,106247571,106240349 Gene ID= ENSG00000136026.13 TPM= 7.24 Transcript Type= NA chr12 106237875 106248012 106237875 106248012 - transcript3290.chr12.nnic@CKAP4 transcript3290.chr12.nnic protein_coding 106247653,106247369,106237875 106248012,106247581,106240349 Gene ID= ENSG00000136026.13 TPM= 9.06 Transcript Type= NA chr12 106237877 106247988 106237877 106247988 - ENST00000378026.4@CKAP4 ENST00000378026.4 protein_coding 106247369,106237877 106247988,106240349 Gene ID= ENSG00000136026.13 TPM= 215.52 Transcript Type= protein_coding chr12 106302803 106347015 106302803 106347015 + ENST00000299045.7@TCP11L2 ENST00000299045.7 protein_coding 106302803,106311041,106314358,106318344,106321486,106323510,106335639,106336032,106340826,106346286 106302941,106311232,106314493,106318464,106321706,106323646,106335826,106336213,106340998,106347015 Gene ID= ENSG00000166046.10 TPM= 1.81 Transcript Type= protein_coding chr12 106357658 106510198 106357658 106510198 + ENST00000228347.8@POLR3B ENST00000228347.8 protein_coding 106357658,106363870,106366516,106366658,106369275,106369583,106376359,106378267,106380031,106393031,106405857,106410826,106427197,106430273,106432318,106433719,106437057,106437681,106444463,106454502,106457138,106459251,106463478,106496055,106496752,106501323,106504081,106509420 106357951,106363902,106366572,106366722,106369350,106369683,106376450,106378384,106380139,106393153,106405976,106410960,106427358,106430473,106432480,106433872,106437131,106437779,106444590,106454711,106457296,106459368,106463620,106496158,106496918,106501436,106504254,106510198 Gene ID= ENSG00000013503.9 TPM= 12.68 Transcript Type= protein_coding chr12 106358082 106510196 106358082 106510196 + ENST00000539066.5@POLR3B ENST00000539066.5 protein_coding 106358082,106363870,106366516,106366658,106369275,106369583,106376359,106378267,106380031,106393031,106405857,106410826,106427197,106430273,106432318,106433719,106437057,106437681,106444463,106454502,106457138,106459251,106463478,106496055,106496752,106501323,106504081,106509420 106358222,106363902,106366572,106366722,106369350,106369683,106376450,106378384,106380139,106393153,106405976,106410960,106427358,106430473,106432480,106433872,106437131,106437779,106444590,106454711,106457296,106459368,106463620,106496158,106496918,106501436,106504254,106510196 Gene ID= ENSG00000013503.9 TPM= 1.81 Transcript Type= protein_coding chr12 106955722 106973984 106955722 106973984 + ENST00000280756.8@TMEM263 ENST00000280756.8 protein_coding 106955722,106957082,106967111,106971105 106956065,106957149,106967180,106973984 Gene ID= ENSG00000151135.9 TPM= 24.45 Transcript Type= protein_coding chr12 106955719 106974036 106955719 106974036 + ENST00000548125.5@TMEM263 ENST00000548125.5 protein_coding 106955719,106967111,106971105 106956065,106967180,106974036 Gene ID= ENSG00000151135.9 TPM= 33.51 Transcript Type= protein_coding chr12 106978268 106987157 106978268 106987157 - transcript3323.chr12.nic@MTERF2 transcript3323.chr12.nic protein_coding 106986969,106985115,106980621,106978268 106987157,106985225,106980713,106978771 Gene ID= ENSG00000120832.9 TPM= 1.81 Transcript Type= NA chr12 106977556 106987121 106977556 106987121 - transcript3329.chr12.nic@MTERF2 transcript3329.chr12.nic protein_coding 106986969,106985115,106977556 106987121,106986309,106978771 Gene ID= ENSG00000120832.9 TPM= 4.98 Transcript Type= NA chr12 106977549 106987126 106977549 106987126 - ENST00000552029.1@MTERF2 ENST00000552029.1 protein_coding 106985115,106977549 106987126,106978771 Gene ID= ENSG00000120832.9 TPM= 7.7 Transcript Type= protein_coding chr12 106991367 107093565 106991367 107093565 - transcript3334.chr12.nic@CRY1 transcript3334.chr12.nic protein_coding 107092804,107022084,107005106,107001764,107001280,106999942,106999551,106997915,106997488,106997294,106992965,106991367 107093565,107022192,107005248,107001948,107001368,107000082,106999862,106998066,106997690,106997386,106993036,106992890 Gene ID= ENSG00000008405.11 TPM= 5.43 Transcript Type= NA chr12 106991364 107093829 106991364 107093829 - ENST00000008527.9@CRY1 ENST00000008527.9 protein_coding 107092804,107022084,107005106,107001764,107001280,106999942,106999551,106997915,106997488,106997294,106992965,106992787,106991364 107093829,107022192,107005248,107001948,107001368,107000082,106999862,106998066,106997690,106997386,106993036,106992890,106992001 Gene ID= ENSG00000008405.11 TPM= 43.47 Transcript Type= protein_coding chr12 107318413 107659642 107318413 107659642 + ENST00000280758.9@BTBD11 ENST00000280758.9 protein_coding 107318413,107520487,107543935,107581152,107610190,107612780,107615061,107617089,107617301,107618158,107619986,107635285,107640311,107642090,107649206,107651674,107657509 107320075,107520636,107544139,107581304,107610355,107612869,107615162,107617182,107617436,107618378,107620164,107635390,107640413,107642171,107649274,107651787,107659642 Gene ID= ENSG00000151136.14 TPM= 1.81 Transcript Type= protein_coding chr12 107685732 107713167 107685732 107713167 + ENST00000412830.7@PWP1 ENST00000412830.7 protein_coding 107685732,107688448,107688615,107692814,107693000,107696474,107697467,107699373,107702935,107703685,107704636,107708926,107709111,107710405,107712111 107685971,107688506,107688802,107692899,107693096,107696584,107697597,107699434,107703031,107703746,107704747,107709016,107709232,107710510,107713167 Gene ID= ENSG00000136045.11 TPM= 38.03 Transcript Type= protein_coding chr12 107732866 107761160 107732866 107761160 - ENST00000228437.9@PRDM4 ENST00000228437.9 protein_coding 107760957,107760505,107756832,107753924,107751415,107746275,107744543,107743197,107742221,107740946,107739383,107732866 107761160,107760771,107756965,107754109,107752209,107746424,107744661,107743282,107742348,107741260,107739551,107734522 Gene ID= ENSG00000110851.11 TPM= 36.22 Transcript Type= protein_coding chr12 108288044 108339317 108288044 108339317 - ENST00000312143.11@CMKLR1 ENST00000312143.11 protein_coding 108339027,108293589,108288044 108339317,108293664,108292959 Gene ID= ENSG00000174600.13 TPM= 10.87 Transcript Type= protein_coding chr12 108515185 108521210 108515185 108521210 + ENST00000552695.5@FICD ENST00000552695.5 protein_coding 108515185,108516915,108518400 108515361,108517273,108521210 Gene ID= ENSG00000198855.6 TPM= 25.36 Transcript Type= protein_coding chr12 108522580 108561389 108522580 108561389 - ENST00000228284.7@SART3 ENST00000228284.7 protein_coding 108560843,108549088,108547887,108545139,108544427,108543028,108538934,108538065,108537488,108536708,108536514,108535359,108532222,108531204,108530142,108526099,108525457,108524316,108522580 108561389,108549214,108547991,108545323,108544478,108543152,108539089,108538203,108537595,108536785,108536572,108535468,108532334,108531280,108530310,108526553,108525609,108524506,108523634 Gene ID= ENSG00000075856.11 TPM= 45.28 Transcript Type= protein_coding chr12 108562601 108569384 108562601 108569384 + ENST00000311893.13@ISCU ENST00000311893.13 protein_coding 108562601,108564279,108565321,108567190,108568831 108562736,108564392,108565431,108567268,108569384 Gene ID= ENSG00000136003.15 TPM= 466.06 Transcript Type= protein_coding chr12 108562606 108569368 108562606 108569368 + ENST00000392807.8@ISCU ENST00000392807.8 protein_coding 108562606,108564060,108564279,108565321,108567190,108568831 108562736,108564155,108564392,108565431,108567268,108569368 Gene ID= ENSG00000136003.15 TPM= 12.83 Transcript Type= protein_coding chr12 108589846 108598124 108589846 108598124 - ENST00000392806.3@TMEM119 ENST00000392806.3 protein_coding 108597970,108589846 108598124,108592397 Gene ID= ENSG00000183160.8 TPM= 26.26 Transcript Type= protein_coding chr12 108622277 108633959 108622277 108633959 - ENST00000550948.1@SELPLG ENST00000550948.1 protein_coding 108633740,108622277 108633959,108624312 Gene ID= ENSG00000110876.9 TPM= 26.26 Transcript Type= protein_coding chr12 108645109 108731596 108645109 108731596 - ENST00000261401.7@CORO1C ENST00000261401.7 protein_coding 108731429,108701124,108678272,108662029,108658738,108657304,108654306,108652272,108648963,108648605,108645109 108731596,108701323,108678394,108662158,108658919,108657423,108654410,108652417,108649020,108648850,108647522 Gene ID= ENSG00000110880.10 TPM= 57.95 Transcript Type= protein_coding chr12 108791919 108857590 108791919 108857590 - ENST00000551165.5@SSH1 ENST00000551165.5 protein_coding 108857428,108852638,108823258,108818249,108817038,108811260,108809693,108807633,108806301,108805056,108802322,108800780,108799000,108791919 108857590,108852678,108823361,108818313,108817159,108811328,108809758,108807827,108806394,108805184,108802368,108800926,108799200,108792829 Gene ID= ENSG00000084112.14 TPM= 1.81 Transcript Type= protein_coding chr12 109052571 109088016 109052571 109088016 + transcript3372.chr12.nic@USP30 transcript3372.chr12.nic protein_coding 109052571,109056682,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667 109052761,109056791,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088016 Gene ID= ENSG00000135093.12 TPM= 4.23 Transcript Type= NA chr12 109052580 109088016 109052580 109088016 + transcript3373.chr12.nic@USP30 transcript3373.chr12.nic protein_coding 109052580,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667 109052761,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088016 Gene ID= ENSG00000135093.12 TPM= 3.32 Transcript Type= NA chr12 109052586 109088026 109052586 109088026 + ENST00000257548.9@USP30 ENST00000257548.9 protein_coding 109052586,109056682,109057926,109067524,109071612,109072305,109073438,109081334,109081933,109082663,109082843,109084953,109085667 109052761,109056791,109058108,109067627,109071710,109072350,109073532,109081393,109082019,109082743,109083062,109085073,109088026 Gene ID= ENSG00000135093.12 TPM= 15.1 Transcript Type= protein_coding chr12 109088189 109093472 109088189 109093472 - ENST00000343075.7@ALKBH2 ENST00000343075.7 protein_coding 109093247,109092507,109090009,109088189 109093472,109092787,109090207,109088512 Gene ID= ENSG00000189046.10 TPM= 4.53 Transcript Type= protein_coding chr12 109088189 109093493 109088189 109093493 - transcript3383.chr12.nic@ALKBH2 transcript3383.chr12.nic protein_coding 109093247,109092507,109088189 109093493,109092937,109088512 Gene ID= ENSG00000189046.10 TPM= 1.81 Transcript Type= NA chr12 109088197 109093459 109088197 109093459 - ENST00000429722.2@ALKBH2 ENST00000429722.2 protein_coding 109093247,109092507,109090009,109088197 109093459,109092937,109090207,109088512 Gene ID= ENSG00000189046.10 TPM= 9.06 Transcript Type= protein_coding chr12 109097574 109110992 109097574 109110992 + ENST00000242576.6@UNG ENST00000242576.6 protein_coding 109097574,109098432,109099189,109101902,109102839,109103433,109109829 109097811,109098638,109099284,109101999,109102927,109103611,109110992 Gene ID= ENSG00000076248.10 TPM= 23.09 Transcript Type= protein_coding chr12 109098118 109110975 109098118 109110975 + ENST00000336865.6@UNG ENST00000336865.6 protein_coding 109098118,109099189,109101902,109102839,109103433,109109829 109098638,109099284,109101999,109102927,109103611,109110975 Gene ID= ENSG00000076248.10 TPM= 166.17 Transcript Type= protein_coding chr12 109448654 109465973 109448654 109465973 - transcript3397.chr12.nnic@KCTD10 transcript3397.chr12.nnic protein_coding 109465405,109464782,109460636,109457992,109457630,109456118,109448654 109465973,109464891,109460805,109458078,109457682,109456313,109451813 Gene ID= ENSG00000110906.12 TPM= 10.87 Transcript Type= NA chr12 109448656 109477544 109448656 109477544 - ENST00000228495.10@KCTD10 ENST00000228495.10 protein_coding 109477260,109469515,109460636,109457992,109457630,109456118,109448656 109477544,109469728,109460805,109458078,109457682,109456313,109451813 Gene ID= ENSG00000110906.12 TPM= 76.97 Transcript Type= protein_coding chr12 109477634 109536704 109477634 109536704 + transcript3400.chr12.nnic@UBE3B transcript3400.chr12.nnic protein_coding 109477634,109477901,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109508531,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591 109477812,109478109,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109508719,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536704 Gene ID= ENSG00000151148.13 TPM= 4.23 Transcript Type= NA chr12 109477402 109536705 109477402 109536705 + ENST00000434735.6@UBE3B ENST00000434735.6 protein_coding 109477402,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591 109477764,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536705 Gene ID= ENSG00000151148.13 TPM= 7.4 Transcript Type= protein_coding chr12 109477642 109536702 109477642 109536702 + ENST00000342494.7@UBE3B ENST00000342494.7 protein_coding 109477642,109481637,109483531,109483861,109486012,109486471,109488572,109489919,109491045,109497818,109498233,109499633,109501371,109503023,109507564,109509596,109510344,109511204,109516765,109521148,109521441,109523978,109524438,109526358,109529890,109530547,109533466,109534591 109478109,109481742,109483712,109483981,109486071,109486575,109488668,109490004,109491127,109497923,109498353,109499810,109501534,109503190,109507735,109509714,109510458,109511303,109516884,109521324,109521551,109524115,109524503,109526416,109530072,109530658,109533558,109536702 Gene ID= ENSG00000151148.13 TPM= 10.11 Transcript Type= protein_coding chr12 109553737 109573874 109553737 109573874 - ENST00000545712.6@MMAB ENST00000545712.6 protein_coding 109573347,109571649,109568770,109565119,109561780,109561420,109561040,109559096,109553737 109573874,109571710,109568863,109565176,109561852,109561517,109561104,109559155,109557136 Gene ID= ENSG00000139428.11 TPM= 73.8 Transcript Type= protein_coding chr12 109554421 109573513 109554421 109573513 - transcript3420.chr12.nic@MMAB transcript3420.chr12.nic protein_coding 109573347,109568770,109565119,109561780,109561420,109561040,109559096,109554421 109573513,109568863,109565176,109561852,109561517,109561104,109559155,109557136 Gene ID= ENSG00000139428.11 TPM= 2.26 Transcript Type= NA chr12 109556703 109573503 109556703 109573503 - ENST00000537496.5@MMAB ENST00000537496.5 protein_coding 109573347,109571649,109568770,109565119,109561780,109561420,109561243,109561040,109559096,109556703 109573503,109571710,109568863,109565176,109561852,109561517,109561329,109561104,109559155,109557136 Gene ID= ENSG00000139428.11 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr12 109573778 109598124 109573778 109598124 + transcript3408.chr12.nic@MVK transcript3408.chr12.nic protein_coding 109573778,109574809,109575998,109579165,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426 109573873,109574900,109576145,109579282,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109598124 Gene ID= ENSG00000110921.13 TPM= 4.07 Transcript Type= NA chr12 109573812 109597266 109573812 109597266 + ENST00000228510.7@MVK ENST00000228510.7 protein_coding 109573812,109574809,109575998,109579802,109581395,109586022,109586754,109590771,109591241,109595028,109596426 109573873,109574900,109576145,109579946,109581550,109586125,109586799,109590861,109591357,109595181,109597266 Gene ID= ENSG00000110921.13 TPM= 58.41 Transcript Type= protein_coding chr12 109573837 109597261 109573837 109597261 + ENST00000392727.7@MVK ENST00000392727.7 protein_coding 109573837,109574809,109575998,109579802,109586022,109586754,109590771,109591241,109595028,109596426 109573873,109574900,109576145,109579946,109586125,109586799,109590861,109591357,109595181,109597261 Gene ID= ENSG00000110921.13 TPM= 1.81 Transcript Type= protein_coding chr12 109717823 109770519 109717823 109770519 + transcript3431.chr12.nnic@FAM222A transcript3431.chr12.nnic protein_coding 109717823,109744101,109768012 109718017,109744228,109770519 Gene ID= ENSG00000139438.5 TPM= 13.58 Transcript Type= NA chr12 109783087 109833401 109783087 109833401 - ENST00000261740.6@TRPV4 ENST00000261740.6 protein_coding 109833350,109814411,109808296,109802991,109800618,109798614,109796525,109794329,109793930,109793527,109792652,109792363,109788400,109786710,109784316,109783087 109833401,109814827,109808468,109803143,109800758,109798912,109796704,109794487,109794022,109793600,109792817,109792429,109788716,109786837,109784437,109783778 Gene ID= ENSG00000111199.10 TPM= 1.81 Transcript Type= protein_coding chr12 109850946 109880432 109850946 109880432 - transcript3440.chr12.nnic@GLTP transcript3440.chr12.nnic protein_coding 109880272,109858683,109857526,109855619,109851972,109850946 109880432,109858741,109857659,109855769,109852737,109851864 Gene ID= ENSG00000139433.9 TPM= 2.72 Transcript Type= NA chr12 109850946 109880458 109850946 109880458 - transcript3441.chr12.nnic@GLTP transcript3441.chr12.nnic protein_coding 109880272,109858683,109857526,109855619,109852012,109850946 109880458,109858741,109857659,109855769,109852737,109851864 Gene ID= ENSG00000139433.9 TPM= 2.72 Transcript Type= NA chr12 109850943 109880488 109850943 109880488 - ENST00000318348.8@GLTP ENST00000318348.8 protein_coding 109880272,109858683,109857526,109855619,109850943 109880488,109858741,109857659,109855769,109852737 Gene ID= ENSG00000139433.9 TPM= 88.74 Transcript Type= protein_coding chr12 109900280 109918069 109900280 109918069 + ENST00000405876.8@TCHP ENST00000405876.8 protein_coding 109900280,109903027,109903937,109904737,109906572,109907526,109908586,109908871,109911063,109912991,109914442,109915403,109916591 109900426,109903214,109904147,109904793,109906640,109907699,109908698,109908937,109911235,109913072,109914627,109915546,109918069 Gene ID= ENSG00000139437.17 TPM= 16.3 Transcript Type= protein_coding chr12 109948064 109982301 109948064 109982301 - transcript3461.chr12.nnic@GIT2 transcript3461.chr12.nnic protein_coding 109982221,109980952,109967458,109965526,109961613,109961278,109959847,109953092,109951167,109948064 109982301,109981046,109967503,109965577,109961685,109961375,109959958,109953234,109951316,109948846 Gene ID= ENSG00000139436.20 TPM= 2.72 Transcript Type= NA chr12 109999150 110039436 109999150 110039436 + transcript3463.chr12.nic@ANKRD13A transcript3463.chr12.nic protein_coding 109999150,110012005,110013125,110016388,110018345,110019139,110024046,110025742,110027705,110028512,110029478,110030645,110033797,110036261,110037359 109999319,110012137,110013249,110016433,110018488,110019328,110024112,110025823,110027766,110028642,110029635,110030758,110033957,110036328,110039436 Gene ID= ENSG00000076513.16 TPM= 5.43 Transcript Type= NA chr12 109999392 110039436 109999392 110039436 + transcript3467.chr12.nic@ANKRD13A transcript3467.chr12.nic protein_coding 109999392,110012005,110013125,110016388,110018345,110019139,110024046,110025742,110027705,110028512,110029478,110030645,110036261,110037359 109999784,110012137,110013249,110016433,110018488,110019328,110024112,110025823,110027766,110028642,110029635,110030758,110036328,110039436 Gene ID= ENSG00000076513.16 TPM= 1.81 Transcript Type= NA chr12 109999392 110039436 109999392 110039436 + transcript3468.chr12.nnic@ANKRD13A transcript3468.chr12.nnic protein_coding 109999392,110012005,110013125,110016388,110018345,110019139,110024046,110025742,110027705,110028512,110029478,110033797,110036261,110037359 109999784,110012137,110013249,110016433,110018488,110019328,110024112,110025823,110027766,110028642,110029635,110033957,110036328,110039436 Gene ID= ENSG00000076513.16 TPM= 4.53 Transcript Type= NA chr12 110027028 110048555 110027028 110048555 - ENST00000546651.3@C12orf76 ENST00000546651.3 protein_coding 110048363,110027028 110048555,110028589 Gene ID= ENSG00000174456.13 TPM= 4.53 Transcript Type= protein_coding chr12 110124358 110218786 110124358 110218786 + transcript3479.chr12.nnic@IFT81 transcript3479.chr12.nnic protein_coding 110124358,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110161162,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044 110124861,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110161283,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218786 Gene ID= ENSG00000122970.15 TPM= 1.81 Transcript Type= NA chr12 110124335 110218775 110124335 110218775 + ENST00000552912.5@IFT81 ENST00000552912.5 protein_coding 110124335,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044 110124443,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218775 Gene ID= ENSG00000122970.15 TPM= 8.15 Transcript Type= protein_coding chr12 110124377 110218797 110124377 110218797 + ENST00000242591.9@IFT81 ENST00000242591.9 protein_coding 110124377,110127360,110128046,110128950,110132547,110134948,110135327,110136776,110143382,110146953,110162919,110180422,110190920,110192617,110203864,110205443,110205595,110209171,110218044 110124861,110127524,110128149,110129130,110132636,110135013,110135437,110136860,110143545,110147048,110163065,110180571,110191048,110192706,110203950,110205514,110205680,110209216,110218797 Gene ID= ENSG00000122970.15 TPM= 5.43 Transcript Type= protein_coding chr12 110281276 110351090 110281276 110351090 + transcript3485.chr12.nnic@ATP2A2 transcript3485.chr12.nnic protein_coding 110281276,110281573,110282604,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201 110281450,110281907,110282621,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110351090 Gene ID= ENSG00000174437.16 TPM= 12.22 Transcript Type= NA chr12 110281681 110347326 110281681 110347326 + ENST00000539276.6@ATP2A2 ENST00000539276.6 protein_coding 110281681,110282604,110282713,110292020,110296599,110322992,110326390,110327553,110332597,110333181,110334012,110339281,110339503,110340659,110342228,110343232,110344886,110345249,110346001,110346201 110281907,110282621,110282795,110292124,110296737,110323072,110326475,110328017,110332685,110333283,110334143,110339403,110339721,110340994,110342448,110343434,110344971,110345382,110346118,110347326 Gene ID= ENSG00000174437.16 TPM= 12.22 Transcript Type= protein_coding chr12 110373479 110403740 110373479 110403740 - transcript3496.chr12.nic@ANAPC7 transcript3496.chr12.nic protein_coding 110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110376066,110373479 110403740,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110376216,110374333 Gene ID= ENSG00000196510.12 TPM= 2.72 Transcript Type= NA chr12 110375455 110403740 110375455 110403740 - transcript3497.chr12.nnic@ANAPC7 transcript3497.chr12.nnic protein_coding 110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110375455 110403740,110396452,110395220,110388623,110387892,110386418,110382960,110381948,110377617,110376216 Gene ID= ENSG00000196510.12 TPM= 1.81 Transcript Type= NA chr12 110372900 110403730 110372900 110403730 - ENST00000455511.7@ANAPC7 ENST00000455511.7 protein_coding 110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110376066,110372900 110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216,110374333 Gene ID= ENSG00000196510.12 TPM= 42.56 Transcript Type= protein_coding chr12 110375477 110403730 110375477 110403730 - ENST00000450008.2@ANAPC7 ENST00000450008.2 protein_coding 110403527,110396266,110395101,110388512,110387739,110386327,110382843,110381752,110377393,110375477 110403730,110396452,110395220,110388623,110387892,110386469,110382960,110381948,110377617,110376216 Gene ID= ENSG00000196510.12 TPM= 17.21 Transcript Type= protein_coding chr12 110434825 110450407 110434825 110450407 - ENST00000228825.11@ARPC3 ENST00000228825.11 protein_coding 110450255,110445452,110440312,110437084,110436557,110436110,110434825 110450407,110445551,110440388,110437152,110436683,110436204,110435217 Gene ID= ENSG00000111229.15 TPM= 214.61 Transcript Type= protein_coding chr12 110452484 110468266 110452484 110468266 - ENST00000228827.7@GPN3 ENST00000228827.7 protein_coding 110468156,110465106,110459695,110457510,110455815,110455586,110453743,110452484 110468266,110465214,110459862,110457634,110455930,110455682,110453871,110453096 Gene ID= ENSG00000111231.8 TPM= 27.17 Transcript Type= protein_coding chr12 110468729 110490409 110468729 110490409 + transcript3509.chr12.nic@FAM216A transcript3509.chr12.nic protein_coding 110468729,110473078,110485078,110486325,110486534,110490019 110469018,110473118,110485199,110486454,110487943,110490409 Gene ID= ENSG00000204856.11 TPM= 2.72 Transcript Type= NA chr12 110491097 110502117 110491097 110502117 - ENST00000549578.5@VPS29 ENST00000549578.5 protein_coding 110502049,110496012,110492996,110491097 110502117,110496203,110493231,110492122 Gene ID= ENSG00000111237.18 TPM= 48.29 Transcript Type= protein_coding chr12 110491523 110502099 110491523 110502099 - ENST00000360579.11@VPS29 ENST00000360579.11 protein_coding 110502049,110499535,110496012,110492996,110491523 110502099,110499546,110496203,110493231,110492122 Gene ID= ENSG00000111237.18 TPM= 62.78 Transcript Type= protein_coding chr12 110533245 110583320 110533245 110583320 - ENST00000354300.4@PPTC7 ENST00000354300.4 protein_coding 110582809,110551789,110545880,110539822,110538144,110533245 110583320,110551968,110546078,110539945,110538273,110537095 Gene ID= ENSG00000196850.5 TPM= 19.92 Transcript Type= protein_coding chr12 110614027 110649128 110614027 110649128 + ENST00000614115.4@TCTN1 ENST00000614115.4 protein_coding 110614027,110619836,110626362,110628767,110632472,110634396,110636481,110640383,110641024,110641542,110642247,110644967,110647211,110647749,110649043 110614402,110619956,110626492,110628918,110632559,110634463,110636501,110640517,110641149,110641625,110642389,110645129,110647336,110647893,110649128 Gene ID= ENSG00000204852.15 TPM= 1.99 Transcript Type= protein_coding chr12 110614027 110649430 110614027 110649430 + ENST00000551590.5@TCTN1 ENST00000551590.5 protein_coding 110614027,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043 110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649430 Gene ID= ENSG00000204852.15 TPM= 48.18 Transcript Type= protein_coding chr12 110614107 110649128 110614107 110649128 + ENST00000495659.6@TCTN1 ENST00000495659.6 protein_coding 110614107,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043 110614463,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128 Gene ID= ENSG00000204852.15 TPM= 1.09 Transcript Type= nonsense_mediated_decay chr12 110614125 110649129 110614125 110649129 + transcript3530.chr12.nic@TCTN1 transcript3530.chr12.nic protein_coding 110614125,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110641024,110641542,110644973,110647211,110647749,110649043 110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110641149,110641627,110645129,110647336,110647893,110649129 Gene ID= ENSG00000204852.15 TPM= 2.9 Transcript Type= NA chr12 110614129 110649129 110614129 110649129 + transcript3538.chr12.nnic@TCTN1 transcript3538.chr12.nnic protein_coding 110614129,110619836,110626362,110628767,110632472,110634670,110636481,110640383,110647211,110647749,110649043 110614402,110619956,110626492,110628918,110632559,110634779,110636501,110640517,110647336,110647893,110649129 Gene ID= ENSG00000204852.15 TPM= 1.81 Transcript Type= NA chr12 110614027 110630287 110614027 110630287 + ENST00000550703.6@TCTN1 ENST00000550703.6 protein_coding 110614027,110619836,110626362,110628767 110614402,110619956,110626492,110630287 Gene ID= ENSG00000204852.15 TPM= 3.62 Transcript Type= protein_coding chr12 110614113 110649128 110614113 110649128 + ENST00000397655.7@TCTN1 ENST00000397655.7 protein_coding 110614113,110619836,110626362,110628767,110632472,110634396,110636481,110640383,110641024,110641542,110642249,110644967,110647211,110647749,110649043 110614402,110619956,110626492,110628918,110632559,110634463,110636501,110640517,110641149,110641627,110642389,110645129,110647336,110647893,110649128 Gene ID= ENSG00000204852.15 TPM= 1.99 Transcript Type= protein_coding chr12 110648779 110689157 110648779 110689157 - ENST00000242607.12@HVCN1 ENST00000242607.12 protein_coding 110689080,110688625,110683225,110661164,110655234,110651217,110650168,110648779 110689157,110688708,110683264,110661448,110655338,110651448,110650280,110649475 Gene ID= ENSG00000122986.13 TPM= 5.43 Transcript Type= protein_coding chr12 110719809 110742931 110719809 110742931 - transcript3553.chr12.nic@PPP1CC transcript3553.chr12.nic protein_coding 110742653,110731770,110730529,110724660,110722135,110719809 110742931,110731901,110730759,110724764,110722695,110721165 Gene ID= ENSG00000186298.11 TPM= 7.24 Transcript Type= NA chr12 111360681 111369099 111360681 111369099 - transcript3554.chr12.nnic@FAM109A transcript3554.chr12.nnic protein_coding 111368912,111366113,111365564,111365259,111363041,111360681 111369099,111366257,111365651,111365463,111363554,111361559 Gene ID= ENSG00000198324.13 TPM= 2.72 Transcript Type= NA chr12 111360677 111369099 111360677 111369099 - transcript3556.chr12.nnic@FAM109A transcript3556.chr12.nnic protein_coding 111368912,111366113,111365564,111360677 111369099,111366257,111365651,111365463 Gene ID= ENSG00000198324.13 TPM= 7.24 Transcript Type= NA chr12 111360651 111369121 111360651 111369121 - ENST00000361483.4@FAM109A ENST00000361483.4 protein_coding 111368912,111366113,111365564,111360651 111369121,111366257,111365651,111363463 Gene ID= ENSG00000198324.13 TPM= 2.72 Transcript Type= protein_coding chr12 111360680 111369099 111360680 111369099 - transcript3559.chr12.nnic@FAM109A transcript3559.chr12.nnic protein_coding 111368912,111366113,111360680 111369099,111366257,111363463 Gene ID= ENSG00000198324.13 TPM= 25.36 Transcript Type= NA chr12 111405912 111451622 111405912 111451622 + transcript3562.chr12.nnic@SH2B3 transcript3562.chr12.nnic protein_coding 111405912,111418119,111420409,111446753,111446942,111447125,111447330,111447656,111447983 111406277,111418877,111420488,111446854,111447033,111447219,111447544,111447827,111451622 Gene ID= ENSG00000111252.10 TPM= 1.81 Transcript Type= NA chr12 111405948 111451623 111405948 111451623 + ENST00000341259.6@SH2B3 ENST00000341259.6 protein_coding 111405948,111418119,111446753,111446942,111447125,111447330,111447656,111447983 111406277,111418877,111446854,111447033,111447219,111447544,111447827,111451623 Gene ID= ENSG00000111252.10 TPM= 10.87 Transcript Type= protein_coding chr12 111452266 111599340 111452266 111599340 - transcript3569.chr12.nic@ATXN2 transcript3569.chr12.nic protein_coding 111598784,111555883,111554158,111552906,111552280,111525192,111520882,111519879,111518249,111516154,111513357,111510385,111509891,111509549,111488476,111486761,111485713,111485265,111470558,111470108,111457214,111456029,111453677,111452266 111599340,111555919,111554217,111552977,111552430,111525316,111520973,111520076,111518427,111516363,111513539,111510582,111509998,111509619,111488780,111486824,111485865,111485331,111470742,111470240,111457359,111456256,111453845,111452840 Gene ID= ENSG00000204842.14 TPM= 4.98 Transcript Type= NA chr12 111452266 111599340 111452266 111599340 - transcript3578.chr12.nic@ATXN2 transcript3578.chr12.nic protein_coding 111598784,111555883,111554158,111552906,111552280,111525192,111520882,111519879,111518249,111513357,111510385,111509891,111509549,111488476,111486761,111485713,111485271,111470558,111470108,111457214,111456029,111452266 111599340,111555919,111554217,111552977,111552430,111525316,111520973,111520076,111518427,111513539,111510582,111509998,111509619,111488780,111486824,111485865,111485331,111470742,111470240,111457359,111456256,111452840 Gene ID= ENSG00000204842.14 TPM= 2.72 Transcript Type= NA chr12 111642146 111685986 111642146 111685986 - ENST00000419234.8@BRAP ENST00000419234.8 protein_coding 111685711,111683146,111681637,111679151,111672661,111665639,111660600,111659207,111658736,111655566,111649939,111642146 111685986,111683307,111681835,111679340,111672774,111665787,111660675,111659345,111658845,111655655,111650042,111644562 Gene ID= ENSG00000089234.15 TPM= 29.88 Transcript Type= protein_coding chr12 111686098 111757097 111686098 111757097 + ENST00000313698.8@ACAD10 ENST00000313698.8 protein_coding 111686098,111692697,111702162,111705738,111709526,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333 111686239,111692896,111702310,111705932,111709684,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757097 Gene ID= ENSG00000111271.14 TPM= 34.01 Transcript Type= protein_coding chr12 111686076 111757094 111686076 111757094 + ENST00000455480.6@ACAD10 ENST00000455480.6 protein_coding 111686076,111692697,111702162,111705738,111709526,111710273,111712498,111715821,111721671,111727962,111729806,111733923,111736831,111744643,111746144,111747049,111747295,111748317,111749173,111753772,111755668,111756333 111686239,111692896,111702310,111705932,111709684,111710365,111712657,111715962,111721739,111728143,111729956,111734068,111737004,111745043,111746284,111747186,111747385,111748475,111749345,111753915,111755745,111757094 Gene ID= ENSG00000111271.14 TPM= 3.07 Transcript Type= protein_coding chr12 111766922 111817529 111766922 111817529 + ENST00000261733.6@ALDH2 ENST00000261733.6 protein_coding 111766922,111781918,111783158,111785267,111789823,111790434,111791306,111792061,111792598,111798078,111799906,111803859,111809543 111767096,111782022,111783298,111785346,111789934,111790562,111791419,111792163,111792782,111798242,111800063,111803973,111817529 Gene ID= ENSG00000111275.12 TPM= 1447.05 Transcript Type= protein_coding chr12 111839768 111842902 111839768 111842902 - ENST00000456429.5@MAPKAPK5-AS1 ENST00000456429.5 lincRNA 111841327,111840333,111839768 111842902,111840477,111840003 Gene ID= ENSG00000234608.7 TPM= 2.26 Transcript Type= lincRNA chr12 111839764 111842902 111839764 111842902 - ENST00000428207.4@MAPKAPK5-AS1 ENST00000428207.4 lincRNA 111841327,111839764 111842902,111840477 Gene ID= ENSG00000234608.7 TPM= 5.89 Transcript Type= lincRNA chr12 111842258 111902225 111842258 111902225 + transcript3674.chr12.nnic@MAPKAPK5 transcript3674.chr12.nnic protein_coding 111842258,111865250,111866156,111867572,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967,111893514,111901548 111842769,111865323,111866231,111867669,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889006,111890144,111893022,111893585,111902225 Gene ID= ENSG00000089022.13 TPM= 1.81 Transcript Type= NA chr12 111842223 111893423 111842223 111893423 + transcript3681.chr12.nnic@MAPKAPK5 transcript3681.chr12.nnic protein_coding 111842223,111850050,111865250,111866156,111867572,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967 111842769,111850171,111865323,111866231,111867669,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893423 Gene ID= ENSG00000089022.13 TPM= 2.72 Transcript Type= NA chr12 111841978 111902238 111841978 111902238 + ENST00000550735.6@MAPKAPK5 ENST00000550735.6 protein_coding 111841978,111865250,111866156,111867572,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967 111842769,111865323,111866231,111867669,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111902238 Gene ID= ENSG00000089022.13 TPM= 22.64 Transcript Type= protein_coding chr12 111841975 111893423 111841975 111893423 + transcript3691.chr12.nnic@MAPKAPK5 transcript3691.chr12.nnic protein_coding 111841975,111865250,111866156,111867572,111868753,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967 111842769,111865323,111866231,111867669,111868861,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893423 Gene ID= ENSG00000089022.13 TPM= 2.72 Transcript Type= NA chr12 111842209 111893330 111842209 111893330 + transcript3693.chr12.nic@MAPKAPK5 transcript3693.chr12.nic protein_coding 111842209,111865250,111866156,111867572,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967 111842769,111865323,111866231,111867669,111870360,111871180,111880527,111883768,111886036,111888618,111889006,111890144,111893330 Gene ID= ENSG00000089022.13 TPM= 1.81 Transcript Type= NA chr12 111842233 111893423 111842233 111893423 + transcript3694.chr12.nnic@MAPKAPK5 transcript3694.chr12.nnic protein_coding 111842233,111865250,111866156,111868753,111870271,111871085,111880447,111883581,111885916,111888488,111888885,111890040,111892967 111842769,111865323,111866231,111868861,111870360,111871180,111880527,111883768,111886036,111888618,111889000,111890144,111893423 Gene ID= ENSG00000089022.13 TPM= 1.81 Transcript Type= NA chr12 111931297 112006064 111931297 112006064 - transcript3701.chr12.nic@TMEM116 transcript3701.chr12.nic protein_coding 112005949,112005257,112003800,111991758,111978736,111943265,111938161,111937160,111936692,111933886,111932586,111931297 112006064,112005303,112003863,111991889,111978787,111943369,111938210,111937243,111936830,111934030,111932659,111931827 Gene ID= ENSG00000198270.12 TPM= 2.17 Transcript Type= NA chr12 111931297 112006010 111931297 112006010 - transcript3702.chr12.nic@TMEM116 transcript3702.chr12.nic protein_coding 112005949,112005602,112005257,112003800,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931297 112006010,112005686,112005303,112003863,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827 Gene ID= ENSG00000198270.12 TPM= 2.17 Transcript Type= NA chr12 111931297 112006093 111931297 112006093 - transcript3707.chr12.nic@TMEM116 transcript3707.chr12.nic protein_coding 112005949,112005257,112003800,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931297 112006093,112005303,112003863,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827 Gene ID= ENSG00000198270.12 TPM= 4.89 Transcript Type= NA chr12 111931297 112013154 111931297 112013154 - transcript3708.chr12.nnic@TMEM116 transcript3708.chr12.nnic protein_coding 112012850,112005257,112003800,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931297 112013154,112005303,112003863,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827 Gene ID= ENSG00000198270.12 TPM= 2.17 Transcript Type= NA chr12 111931297 112006256 111931297 112006256 - transcript3714.chr12.nic@TMEM116 transcript3714.chr12.nic protein_coding 112005602,112005257,111991758,111943265,111938161,111937160,111936692,111933886,111932586,111931297 112006256,112005303,111991889,111943369,111938210,111937243,111936830,111934030,111932659,111931827 Gene ID= ENSG00000198270.12 TPM= 2.17 Transcript Type= NA chr12 112013316 112023451 112013316 112023451 + ENST00000261735.3@ERP29 ENST00000261735.3 protein_coding 112013316,112019756,112022150 112013609,112019894,112023451 Gene ID= ENSG00000089248.6 TPM= 238.61 Transcript Type= protein_coding chr12 112013348 112023220 112013348 112023220 + ENST00000455836.1@ERP29 ENST00000455836.1 protein_coding 112013348,112022150 112013609,112023220 Gene ID= ENSG00000089248.6 TPM= 14.94 Transcript Type= protein_coding chr12 112026689 112109022 112026689 112109022 - ENST00000261745.8@NAA25 ENST00000261745.8 protein_coding 112108716,112093051,112090726,112087683,112081060,112078634,112078188,112075678,112074675,112071895,112068880,112061181,112060270,112054388,112053558,112048292,112047665,112043625,112043088,112042039,112040481,112039229,112033233,112026689 112109022,112093136,112090864,112087801,112081134,112078741,112078266,112075789,112074764,112072064,112068992,112061388,112060359,112054568,112053657,112048443,112047790,112043868,112043211,112042104,112040578,112039339,112033379,112029653 Gene ID= ENSG00000111300.9 TPM= 18.11 Transcript Type= protein_coding chr12 112125501 112153609 112125501 112153609 + ENST00000412615.6@TRAFD1 ENST00000412615.6 protein_coding 112125501,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735 112125618,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153609 Gene ID= ENSG00000135148.11 TPM= 52.07 Transcript Type= protein_coding chr12 112125545 112153603 112125545 112153603 + ENST00000257604.9@TRAFD1 ENST00000257604.9 protein_coding 112125545,112130511,112134738,112135013,112140819,112142089,112145586,112148074,112149751,112151801,112152427,112152735 112126149,112130569,112134873,112135066,112141224,112142295,112145662,112148304,112149871,112152140,112152499,112153603 Gene ID= ENSG00000135148.11 TPM= 4.07 Transcript Type= protein_coding chr12 112405189 112409596 112405189 112409596 - transcript3742.chr12.nic@RPL6 transcript3742.chr12.nic protein_coding 112408420,112408240,112406747,112406294,112405853,112405189 112409596,112408338,112406890,112406342,112406037,112405376 Gene ID= ENSG00000089009.15 TPM= 124.06 Transcript Type= NA chr12 112405199 112409641 112405199 112409641 - ENST00000202773.13@RPL6 ENST00000202773.13 protein_coding 112409587,112408420,112408240,112406747,112406294,112405853,112405199 112409641,112408656,112408338,112406890,112406342,112406037,112405376 Gene ID= ENSG00000089009.15 TPM= 527.03 Transcript Type= protein_coding chr12 112405203 112409596 112405203 112409596 - ENST00000424576.6@RPL6 ENST00000424576.6 protein_coding 112409411,112408420,112408240,112406747,112406294,112405853,112405203 112409596,112408656,112408338,112406890,112406342,112406037,112405376 Gene ID= ENSG00000089009.15 TPM= 9.06 Transcript Type= protein_coding chr12 112418896 112509917 112418896 112509917 + transcript3743.chr12.nic@PTPN11 transcript3743.chr12.nic protein_coding 112418896,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486463,112488443,112489024,112502144,112504695,112505825 112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509917 Gene ID= ENSG00000179295.17 TPM= 9.06 Transcript Type= NA chr12 112418914 112509913 112418914 112509913 + ENST00000351677.6@PTPN11 ENST00000351677.6 protein_coding 112418914,112446276,112450318,112453195,112454564,112455950,112472944,112477651,112477857,112482074,112486475,112488443,112489024,112502144,112504695,112505825 112419125,112446398,112450512,112453387,112454680,112456063,112473040,112477730,112478015,112482205,112486629,112488510,112489175,112502256,112504796,112509913 Gene ID= ENSG00000179295.17 TPM= 70.63 Transcript Type= protein_coding chr12 112906777 112919903 112906777 112919903 + ENST00000202917.9@OAS1 ENST00000202917.9 protein_coding 112906777,112908536,112911051,112916509,112917547,112919389 112907219,112908824,112911235,112916738,112917700,112919903 Gene ID= ENSG00000089127.12 TPM= 10.87 Transcript Type= protein_coding chr12 112938352 112973249 112938352 112973249 + ENST00000228928.11@OAS3 ENST00000228928.11 protein_coding 112938352,112941570,112944476,112946743,112947946,112948861,112950693,112961071,112962652,112963313,112964235,112965744,112967418,112967936,112969608,112969962 112938707,112941852,112944651,112946981,112948099,112949205,112950975,112961246,112962902,112963457,112964408,112966029,112967593,112968174,112969755,112973249 Gene ID= ENSG00000111331.12 TPM= 9.96 Transcript Type= protein_coding chr12 112978402 113011718 112978402 113011718 + ENST00000392583.6@OAS2 ENST00000392583.6 protein_coding 112978402,112987038,112995296,112997520,112998266,113002932,113004934,113006413,113007705,113009087 112978785,112987308,112995474,112997755,112998410,113003102,113005222,113006600,113007943,113011718 Gene ID= ENSG00000111335.12 TPM= 5.43 Transcript Type= protein_coding chr12 113056697 113098029 113056697 113098029 + transcript3765.chr12.nic@DTX1 transcript3765.chr12.nic protein_coding 113056697,113057449,113077424,113093162,113093539,113094038,113094789,113095042,113095325,113096715 113056944,113058451,113078105,113093223,113093700,113094099,113094947,113095203,113095414,113098029 Gene ID= ENSG00000135144.7 TPM= 20.83 Transcript Type= NA chr12 113096516 113135842 113096516 113135842 - transcript3759.chr12.nnic@RASAL1 transcript3759.chr12.nnic protein_coding 113135398,113130885,113128065,113127812,113121509,113119128,113117073,113115934,113115635,113115200,113114800,113112086,113108085,113107097,113105714,113104161,113103946,113101889,113100628,113096516 113135842,113130941,113128178,113127873,113121638,113119259,113117161,113116051,113115788,113115264,113114912,113112278,113108222,113107241,113105886,113104298,113104081,113102009,113100680,113100068 Gene ID= ENSG00000111344.11 TPM= 11.62 Transcript Type= NA chr12 113096516 113135735 113096516 113135735 - transcript3762.chr12.nic@RASAL1 transcript3762.chr12.nic protein_coding 113135398,113130885,113128065,113127812,113121509,113119362,113119128,113117073,113115934,113115635,113115200,113114800,113112086,113108085,113107097,113105714,113100628,113096516 113135735,113130941,113128178,113127873,113121638,113119443,113119259,113117161,113116051,113115788,113115264,113114912,113112278,113108222,113107241,113105886,113100680,113100068 Gene ID= ENSG00000111344.11 TPM= 4.83 Transcript Type= NA chr12 113096516 113116377 113096516 113116377 - transcript3763.chr12.nic@RASAL1 transcript3763.chr12.nic protein_coding 113115934,113115635,113115200,113114800,113112086,113108085,113107097,113105714,113104161,113103946,113101889,113100628,113096516 113116377,113115788,113115264,113114912,113112278,113108222,113107241,113105886,113104298,113104081,113102009,113100680,113100068 Gene ID= ENSG00000111344.11 TPM= 17.05 Transcript Type= NA chr12 113157174 113185479 113157174 113185479 - ENST00000314045.11@DDX54 ENST00000314045.11 protein_coding 113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165802,113165644,113164067,113163132,113162932,113161893,113161270,113157174 113185479,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113166032,113165717,113164285,113163274,113163045,113161997,113161382,113159112 Gene ID= ENSG00000123064.12 TPM= 156.96 Transcript Type= protein_coding chr12 113157174 113185479 113157174 113185479 - ENST00000306014.9@DDX54 ENST00000306014.9 protein_coding 113185278,113180929,113179935,113179143,113178977,113177052,113176840,113175036,113174875,113174640,113172353,113169770,113165802,113165644,113164067,113163132,113162932,113161893,113161270,113157174 113185479,113181058,113180005,113179331,113179026,113177093,113176935,113175157,113174936,113174771,113172563,113169904,113166032,113165717,113164285,113163274,113163045,113161997,113161382,113159109 Gene ID= ENSG00000123064.12 TPM= 108.96 Transcript Type= protein_coding chr12 113185526 113192364 113185526 113192364 + ENST00000549621.5@RITA1 ENST00000549621.5 protein_coding 113185526,113186193,113186683,113191310 113186021,113186316,113187048,113192364 Gene ID= ENSG00000139405.15 TPM= 9.96 Transcript Type= protein_coding chr12 113221424 113298582 113221424 113298582 + transcript3787.chr12.nic@TPCN1 transcript3787.chr12.nic protein_coding 113221424,113225244,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113294106,113295960 113221626,113225336,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113294228,113298582 Gene ID= ENSG00000186815.12 TPM= 5.04 Transcript Type= NA chr12 113221462 113298583 113221462 113298583 + transcript3801.chr12.nnic@TPCN1 transcript3801.chr12.nnic protein_coding 113221462,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288597,113290128,113290952,113291609,113291874,113292934,113293269,113295960 113221626,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298583 Gene ID= ENSG00000186815.12 TPM= 6.47 Transcript Type= NA chr12 113221465 113298583 113221465 113298583 + transcript3807.chr12.nic@TPCN1 transcript3807.chr12.nic protein_coding 113221465,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960 113221626,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298583 Gene ID= ENSG00000186815.12 TPM= 10.63 Transcript Type= NA chr12 113221438 113298585 113221438 113298585 + ENST00000335509.10@TPCN1 ENST00000335509.10 protein_coding 113221438,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960 113221626,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298585 Gene ID= ENSG00000186815.12 TPM= 23.31 Transcript Type= protein_coding chr12 113221460 113298585 113221460 113298585 + ENST00000550785.5@TPCN1 ENST00000550785.5 protein_coding 113221460,113225244,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113288758,113290128,113290952,113291609,113291874,113292934,113293269,113295960 113221626,113225336,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288234,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113298585 Gene ID= ENSG00000186815.12 TPM= 24.21 Transcript Type= protein_coding chr12 113221486 113296129 113221486 113296129 + ENST00000552077.5@TPCN1 ENST00000552077.5 protein_coding 113221486,113226728,113260368,113266180,113267843,113268742,113269757,113272658,113273232,113273569,113276919,113277240,113278189,113278772,113280151,113284581,113284718,113285889,113286987,113288163,113290128,113290952,113291609,113291874,113292934,113293269,113295960 113221626,113226964,113260492,113266356,113267956,113268872,113269845,113272692,113273290,113273668,113277035,113277364,113278237,113278835,113280195,113284637,113284771,113285961,113287094,113288847,113290243,113290998,113291677,113291958,113293073,113293349,113296129 Gene ID= ENSG00000186815.12 TPM= 1.13 Transcript Type= retained_intron chr12 113298757 113335158 113298757 113335158 - transcript3833.chr12.nic@SLC8B1 transcript3833.chr12.nic protein_coding 113334443,113332723,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298757 113335158,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974 Gene ID= ENSG00000089060.11 TPM= 290.52 Transcript Type= NA chr12 113298767 113335120 113298767 113335120 - ENST00000202831.7@SLC8B1 ENST00000202831.7 protein_coding 113334993,113332723,113321196,113321056,113320850,113320581,113320331,113318964,113316942,113316526,113315335,113310234,113307691,113306495,113304321,113298767 113335120,113332960,113321348,113321108,113320907,113320686,113320498,113319071,113317001,113316656,113315476,113310355,113307844,113306575,113304385,113299974 Gene ID= ENSG00000089060.11 TPM= 48.74 Transcript Type= protein_coding chr12 113358570 113391625 113358570 113391625 + ENST00000280800.4@PLBD2 ENST00000280800.4 protein_coding 113358570,113369116,113372649,113374474,113374793,113380745,113384105,113384851,113385212,113386937,113387744,113388459 113358890,113369209,113372807,113374574,113375007,113380842,113384265,113384946,113385283,113387089,113387906,113391625 Gene ID= ENSG00000151176.7 TPM= 399.35 Transcript Type= protein_coding chr12 113422409 113438283 113422409 113438283 + transcript3894.chr12.nic@SDSL transcript3894.chr12.nic protein_coding 113422409,113427962,113428420,113429160,113434134,113435329,113436751,113437886 113422887,113428156,113428459,113429299,113434222,113435556,113436875,113438283 Gene ID= ENSG00000139410.14 TPM= 2.72 Transcript Type= NA chr12 113422289 113438283 113422289 113438283 + transcript3895.chr12.nnic@SDSL transcript3895.chr12.nnic protein_coding 113422289,113427962,113428420,113429160,113435329,113436751,113437886 113422477,113428156,113428459,113429299,113435556,113436875,113438283 Gene ID= ENSG00000139410.14 TPM= 1.81 Transcript Type= NA chr12 113422385 113438283 113422385 113438283 + transcript3896.chr12.nic@SDSL transcript3896.chr12.nic protein_coding 113422385,113427962,113428420,113434134,113435329,113436751,113437886 113422477,113428156,113428459,113434222,113435556,113436875,113438283 Gene ID= ENSG00000139410.14 TPM= 1.81 Transcript Type= NA chr12 113816742 113966344 113816742 113966344 - transcript3902.chr12.nnic@RBM19 transcript3902.chr12.nnic protein_coding 113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113818103,113816742 113966344,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186,113817585 Gene ID= ENSG00000122965.10 TPM= 3.26 Transcript Type= NA chr12 113816742 113966344 113816742 113966344 - transcript3903.chr12.nic@RBM19 transcript3903.chr12.nic protein_coding 113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113818103,113816742 113966344,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186,113817925 Gene ID= ENSG00000122965.10 TPM= 4.17 Transcript Type= NA chr12 113816742 113966344 113816742 113966344 - transcript3904.chr12.nnic@RBM19 transcript3904.chr12.nnic protein_coding 113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822200,113816742 113966344,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646,113818186 Gene ID= ENSG00000122965.10 TPM= 4.17 Transcript Type= NA chr12 113822057 113966371 113822057 113966371 - ENST00000261741.9@RBM19 ENST00000261741.9 protein_coding 113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113822057 113966371,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321 Gene ID= ENSG00000122965.10 TPM= 32.6 Transcript Type= protein_coding chr12 113816742 113966306 113816742 113966306 - ENST00000545145.6@RBM19 ENST00000545145.6 protein_coding 113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113816742 113966306,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113818186 Gene ID= ENSG00000122965.10 TPM= 22.28 Transcript Type= protein_coding chr12 113822054 113966310 113822054 113966310 - ENST00000392561.7@RBM19 ENST00000392561.7 protein_coding 113966192,113962232,113960059,113959865,113959212,113957782,113955131,113952512,113950083,113948833,113947334,113946354,113945828,113942324,113939960,113937007,113927054,113924697,113920611,113918392,113914969,113858791,113844668,113823209,113822054 113966310,113962414,113960178,113959903,113959404,113958050,113955211,113952590,113950154,113949036,113947464,113946475,113945924,113942434,113940160,113937136,113927229,113924757,113920690,113918447,113915085,113858896,113844788,113823321,113822646 Gene ID= ENSG00000122965.10 TPM= 18.11 Transcript Type= protein_coding chr12 114670254 114684589 114670254 114684589 - transcript3927.chr12.nic@TBX3 transcript3927.chr12.nic protein_coding 114682812,114679505,114677580,114676313,114674165,114670254 114684589,114681146,114677656,114676470,114674835,114672302 Gene ID= ENSG00000135111.15 TPM= 14.14 Transcript Type= NA chr12 114670254 114684164 114670254 114684164 - ENST00000349155.6@TBX3 ENST00000349155.6 protein_coding 114682812,114680879,114679505,114677580,114676313,114674165,114670254 114684164,114681146,114679651,114677656,114676470,114674835,114672302 Gene ID= ENSG00000135111.15 TPM= 263.18 Transcript Type= protein_coding chr12 114670255 114683590 114670255 114683590 - ENST00000257566.7@TBX3 ENST00000257566.7 protein_coding 114682812,114680879,114679913,114679505,114677580,114676313,114674165,114670255 114683590,114681146,114679972,114679651,114677656,114676470,114674835,114672302 Gene ID= ENSG00000135111.15 TPM= 21.84 Transcript Type= protein_coding chr12 115299585 115321151 115299585 115321151 - transcript3953.chr12.nnic@AC078880.4 transcript3953.chr12.nnic lincRNA 115320834,115314184,115310714,115303775,115299585 115321151,115314287,115310898,115303966,115303012 Gene ID= ENSG00000276308.1 TPM= 8.6 Transcript Type= NA chr12 115299586 115321151 115299586 115321151 - transcript3955.chr12.nnic@AC078880.4 transcript3955.chr12.nnic lincRNA 115320834,115314184,115310714,115303775,115299586 115321151,115314287,115310898,115303966,115301274 Gene ID= ENSG00000276308.1 TPM= 17.21 Transcript Type= NA chr12 115299585 115321151 115299585 115321151 - transcript3958.chr12.nnic@AC078880.4 transcript3958.chr12.nnic lincRNA 115320834,115314184,115310714,115299585 115321151,115314287,115310898,115303966 Gene ID= ENSG00000276308.1 TPM= 12.22 Transcript Type= NA chr12 115307415 115321151 115307415 115321151 - transcript3960.chr12.nnic@AC078880.4 transcript3960.chr12.nnic lincRNA 115320834,115314184,115307415 115321151,115314287,115310898 Gene ID= ENSG00000276308.1 TPM= 33.51 Transcript Type= NA chr12 115953872 116277338 115953872 116277338 - ENST00000281928.7@MED13L ENST00000281928.7 protein_coding 116277060,116237468,116111428,116096669,116022456,116019778,116019224,116015109,116012797,116008401,116007411,116006306,116005869,116003003,115997010,115996476,115991020,115987109,115986266,115984180,115983117,115982384,115980750,115975515,115975171,115972078,115970594,115968940,115966082,115963407,115953872 116277338,116237705,116111512,116096752,116022601,116019972,116019412,116015274,116012901,116009132,116007636,116006411,116005993,116003102,115997230,115996681,115991957,115987288,115986489,115984372,115983540,115982603,115980938,115975738,115975313,115972236,115970770,115969097,115966243,115963519,115961398 Gene ID= ENSG00000123066.7 TPM= 2.72 Transcript Type= protein_coding chr12 116910965 117031148 116910965 117031148 + ENST00000455858.2@FBXW8 ENST00000455858.2 protein_coding 116910965,116928023,116945364,116949618,116964697,116985206,116988663,117010323,117024147,117027394,117028028 116911157,116928127,116945528,116949706,116964854,116985402,116988869,117010450,117024320,117027504,117031148 Gene ID= ENSG00000174989.12 TPM= 3.62 Transcript Type= protein_coding chr12 117038924 117099469 117038924 117099469 - ENST00000335209.11@TESC ENST00000335209.11 protein_coding 117099225,117075271,117056806,117049019,117046777,117046559,117041947,117038924 117099469,117075340,117056886,117049158,117046838,117046666,117041994,117039210 Gene ID= ENSG00000088992.17 TPM= 58.86 Transcript Type= protein_coding chr12 117038925 117099446 117038925 117099446 - ENST00000541210.5@TESC ENST00000541210.5 protein_coding 117099225,117075271,117049019,117046777,117046559,117041947,117038925 117099446,117075340,117049158,117046838,117046666,117041994,117039210 Gene ID= ENSG00000088992.17 TPM= 2.72 Transcript Type= protein_coding chr12 117141988 117190531 117141988 117190531 - ENST00000622495.4@FBXO21 ENST00000622495.4 protein_coding 117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117141988 117190531,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158063,117155948,117146277 Gene ID= ENSG00000135108.14 TPM= 200.96 Transcript Type= protein_coding chr12 117145068 117190456 117145068 117190456 - ENST00000330622.9@FBXO21 ENST00000330622.9 protein_coding 117190218,117189227,117186477,117177520,117174651,117174205,117172471,117166898,117165485,117157873,117155791,117145068 117190456,117189362,117186571,117177641,117174797,117174341,117172607,117167077,117165617,117158084,117155948,117146277 Gene ID= ENSG00000135108.14 TPM= 10.19 Transcript Type= protein_coding chr12 118032907 118061190 118032907 118061190 - ENST00000315436.7@WSB2 ENST00000315436.7 protein_coding 118061036,118052310,118043133,118042841,118038288,118036338,118035214,118034986,118032907 118061190,118052478,118043377,118042972,118038388,118036510,118035324,118035093,118034358 Gene ID= ENSG00000176871.8 TPM= 230.01 Transcript Type= protein_coding chr12 118063595 118103925 118063595 118103925 - transcript3997.chr12.nic@VSIG10 transcript3997.chr12.nic protein_coding 118103593,118102989,118095533,118082127,118079346,118073699,118071359,118071052,118068377,118063595 118103925,118103170,118095814,118082429,118079606,118073992,118071469,118071067,118068597,118066694 Gene ID= ENSG00000176834.13 TPM= 1.81 Transcript Type= NA chr12 118071108 118103973 118071108 118103973 - transcript4004.chr12.nic@VSIG10 transcript4004.chr12.nic protein_coding 118103593,118102989,118095533,118082127,118079346,118073699,118071108 118103973,118103170,118095814,118082429,118079606,118073992,118071469 Gene ID= ENSG00000176834.13 TPM= 1.81 Transcript Type= NA chr12 118115489 118135972 118115489 118135972 - transcript4025.chr12.nnic@VSIG10 transcript4025.chr12.nnic protein_coding 118135857,118126481,118115489 118135972,118126670,118117882 Gene ID= ENSG00000176834.13 TPM= 3.62 Transcript Type= NA chr12 118063593 118103948 118063593 118103948 - ENST00000359236.9@VSIG10 ENST00000359236.9 protein_coding 118103593,118095533,118082127,118079346,118073699,118071359,118071052,118068377,118063593 118103948,118095814,118082429,118079606,118073992,118071469,118071067,118068597,118066694 Gene ID= ENSG00000176834.13 TPM= 56.14 Transcript Type= protein_coding chr12 118101605 118103885 118101605 118103885 - ENST00000612851.1@VSIG10 ENST00000612851.1 protein_coding 118103593,118101605 118103885,118103176 Gene ID= ENSG00000176834.13 TPM= 4.53 Transcript Type= retained_intron chr12 118102839 118103990 118102839 118103990 - ENST00000542195.1@VSIG10 ENST00000542195.1 protein_coding 118103593,118102839 118103990,118103170 Gene ID= ENSG00000176834.13 TPM= 1.81 Transcript Type= retained_intron chr12 118135858 118145584 118135858 118145584 + ENST00000261313.2@PEBP1 ENST00000261313.2 protein_coding 118135858,118138039,118139451,118144586 118136344,118138148,118139551,118145584 Gene ID= ENSG00000089220.4 TPM= 9011.82 Transcript Type= protein_coding chr12 118150975 118190549 118150975 118190549 - transcript4050.chr12.nic@TAOK3 transcript4050.chr12.nic protein_coding 118190183,118189807,118181371,118177201,118172457,118161788,118160146,118152227,118150975 118190549,118189941,118181607,118177329,118172660,118162027,118160358,118152409,118151158 Gene ID= ENSG00000135090.13 TPM= 1.81 Transcript Type= NA chr12 118159978 118190456 118159978 118190456 - transcript4053.chr12.nic@TAOK3 transcript4053.chr12.nic protein_coding 118189807,118181371,118177201,118172457,118161788,118159978 118190456,118181607,118177329,118172660,118162027,118160358 Gene ID= ENSG00000135090.13 TPM= 2.72 Transcript Type= NA chr12 118150957 118190545 118150957 118190545 - ENST00000537952.1@TAOK3 ENST00000537952.1 protein_coding 118189807,118181371,118177201,118172457,118161788,118160146,118152227,118150957 118190545,118181607,118177329,118172660,118162027,118160358,118152409,118151158 Gene ID= ENSG00000135090.13 TPM= 14.49 Transcript Type= protein_coding chr12 119178642 119194748 119178642 119194748 + ENST00000281938.6@HSPB8 ENST00000281938.6 protein_coding 119178642,119187025,119193699 119179679,119187088,119194748 Gene ID= ENSG00000152137.6 TPM= 18.11 Transcript Type= protein_coding chr12 119667970 119681624 119667970 119681624 + transcript4057.chr12.nnic@PRKAB1 transcript4057.chr12.nnic protein_coding 119667970,119672301,119673964,119674340,119676537,119679433,119679933,119680248 119668403,119672464,119674057,119674454,119676670,119679502,119680001,119681624 Gene ID= ENSG00000111725.10 TPM= 3.62 Transcript Type= NA chr12 119667864 119681624 119667864 119681624 + ENST00000541640.5@PRKAB1 ENST00000541640.5 protein_coding 119667864,119668236,119672301,119673964,119674340,119676537,119679933,119680248 119668045,119668403,119672464,119674057,119674454,119676670,119680001,119681624 Gene ID= ENSG00000111725.10 TPM= 4.68 Transcript Type= protein_coding chr12 119667965 119681624 119667965 119681624 + transcript4059.chr12.nic@PRKAB1 transcript4059.chr12.nic protein_coding 119667965,119671495,119672301,119673964,119674340,119676537,119679933,119680248 119668403,119671668,119672464,119674057,119674454,119676670,119680001,119681624 Gene ID= ENSG00000111725.10 TPM= 3.32 Transcript Type= NA chr12 119667753 119681630 119667753 119681630 + ENST00000229328.9@PRKAB1 ENST00000229328.9 protein_coding 119667753,119672301,119673964,119674340,119676537,119679933,119680248 119668403,119672464,119674057,119674454,119676670,119680001,119681630 Gene ID= ENSG00000111725.10 TPM= 83.46 Transcript Type= protein_coding chr12 119685790 119730730 119685790 119730730 - transcript4061.chr12.nic@CIT transcript4061.chr12.nic protein_coding 119730495,119728502,119721309,119720478,119718699,119718245,119714197,119713468,119713203,119712591,119712178,119710540,119710251,119708179,119704363,119701850,119701624,119700745,119697976,119697659,119690151,119685790 119730730,119728606,119721449,119720585,119718816,119718409,119714334,119713648,119713294,119712695,119712347,119710620,119710386,119708318,119704455,119701958,119701752,119700825,119698054,119697838,119690454,119688255 Gene ID= ENSG00000122966.15 TPM= 4.07 Transcript Type= NA chr12 119685790 119704574 119685790 119704574 - transcript4063.chr12.nic@CIT transcript4063.chr12.nic protein_coding 119704363,119701850,119701624,119700745,119697976,119697659,119690151,119685790 119704574,119701958,119701752,119700825,119698054,119697838,119690451,119688255 Gene ID= ENSG00000122966.15 TPM= 29.88 Transcript Type= NA chr12 120095095 120116839 120095095 120116839 - ENST00000229340.9@RAB35 ENST00000229340.9 protein_coding 120116599,120108417,120103826,120099030,120098811,120095095 120116839,120108467,120103949,120099154,120098935,120097373 Gene ID= ENSG00000111737.11 TPM= 37.13 Transcript Type= protein_coding chr12 120127203 120194710 120127203 120194710 - ENST00000300648.6@GCN1 ENST00000300648.6 protein_coding 120194680,120190298,120184824,120184112,120183569,120178852,120178625,120177684,120177447,120176143,120175746,120175162,120174071,120173653,120170169,120168208,120164646,120164336,120163070,120162847,120161880,120161490,120160142,120159825,120158460,120157849,120156912,120156461,120155592,120155241,120154970,120153744,120153213,120151145,120149922,120149606,120148167,120147052,120145262,120144923,120144639,120144306,120142824,120142507,120140859,120138695,120138323,120137901,120137545,120137206,120136502,120134533,120134291,120131926,120131185,120130646,120129276,120127203 120194710,120190400,120184887,120184243,120183677,120178950,120178759,120177752,120177555,120176217,120175874,120175212,120174169,120173826,120170321,120168300,120164721,120164495,120163259,120162971,120162058,120161583,120160255,120160023,120158615,120158030,120156992,120156604,120155719,120155430,120155040,120153909,120153407,120151391,120150043,120149720,120148346,120147272,120145330,120145061,120144835,120144448,120142941,120142722,120141023,120138856,120138415,120138044,120137814,120137319,120136732,120134726,120134405,120132022,120131333,120130753,120129494,120127974 Gene ID= ENSG00000089154.10 TPM= 25.36 Transcript Type= protein_coding chr12 120196686 120201211 120196686 120201211 - ENST00000392514.8@RPLP0 ENST00000392514.8 protein_coding 120201083,120200730,120199310,120199118,120198854,120198554,120197322,120196686 120201211,120200831,120199485,120199205,120199000,120198739,120197462,120196934 Gene ID= ENSG00000089157.15 TPM= 1142.07 Transcript Type= protein_coding chr12 120196708 120201110 120196708 120201110 - ENST00000549098.5@RPLP0 ENST00000549098.5 protein_coding 120201083,120200719,120199310,120199118,120198854,120198554,120197322,120196708 120201110,120200831,120199485,120199205,120199000,120198739,120197462,120196934 Gene ID= ENSG00000089157.15 TPM= 86.36 Transcript Type= nonsense_mediated_decay chr12 120196702 120201107 120196702 120201107 - ENST00000313104.9@RPLP0 ENST00000313104.9 protein_coding 120201083,120200730,120199310,120199118,120198854,120197322,120196702 120201107,120200831,120199485,120199205,120199000,120197462,120196934 Gene ID= ENSG00000089157.15 TPM= 6.6 Transcript Type= protein_coding chr12 120196702 120201110 120196702 120201110 - ENST00000546989.5@RPLP0 ENST00000546989.5 protein_coding 120201083,120200730,120199310,120199118,120198854,120198554,120197322,120196702 120201110,120200831,120199485,120199205,120199000,120198631,120197462,120196934 Gene ID= ENSG00000089157.15 TPM= 3.88 Transcript Type= protein_coding chr12 120201291 120212919 120201291 120212919 + ENST00000542265.5@PXN-AS1 ENST00000542265.5 antisense_RNA 120201291,120206545,120209839,120212375 120201426,120206621,120209934,120212919 Gene ID= ENSG00000255857.5 TPM= 4.53 Transcript Type= antisense_RNA chr12 120210447 120265775 120210447 120265775 - transcript4094.chr12.nic@PXN transcript4094.chr12.nic protein_coding 120265617,120224643,120224151,120223718,120222863,120222549,120221623,120215103,120214825,120214136,120213842,120210447 120265775,120224727,120224377,120223833,120222999,120222750,120221758,120215273,120214998,120214217,120213990,120212580 Gene ID= ENSG00000089159.16 TPM= 11.72 Transcript Type= NA chr12 120210447 120265803 120210447 120265803 - transcript4097.chr12.nic@PXN transcript4097.chr12.nic protein_coding 120265617,120224151,120223718,120222863,120222549,120221623,120215560,120215103,120214825,120214136,120213842,120210447 120265803,120224377,120223833,120222999,120222750,120221758,120215661,120215417,120214998,120214217,120213990,120212580 Gene ID= ENSG00000089159.16 TPM= 7.64 Transcript Type= NA chr12 120210447 120250161 120210447 120250161 - ENST00000458477.6@PXN ENST00000458477.6 protein_coding 120249883,120224151,120223718,120222863,120222549,120221623,120215103,120214825,120214136,120213842,120210447 120250161,120224377,120223833,120222999,120222750,120221758,120215273,120214998,120214217,120213990,120212580 Gene ID= ENSG00000089159.16 TPM= 12.62 Transcript Type= protein_coding chr12 120210447 120265771 120210447 120265771 - ENST00000424649.6@PXN ENST00000424649.6 protein_coding 120265617,120224151,120223718,120222863,120222549,120221623,120215103,120214825,120214136,120213842,120210447 120265771,120224377,120223833,120222999,120222750,120221758,120215273,120214998,120214217,120213990,120212580 Gene ID= ENSG00000089159.16 TPM= 121.29 Transcript Type= protein_coding chr12 120210447 120265771 120210447 120265771 - ENST00000228307.11@PXN ENST00000228307.11 protein_coding 120265617,120224151,120223718,120222863,120222549,120221623,120215560,120215103,120214825,120214136,120213842,120210447 120265771,120224377,120223833,120222999,120222750,120221758,120215661,120215273,120214998,120214217,120213990,120212580 Gene ID= ENSG00000089159.16 TPM= 23.34 Transcript Type= protein_coding chr12 120210439 120265771 120210439 120265771 - ENST00000267257.11@PXN ENST00000267257.11 protein_coding 120265617,120224151,120223718,120222863,120222549,120221623,120215103,120214825,120214136,120213842,120210439 120265771,120224377,120223833,120222999,120222750,120221758,120215417,120214998,120214217,120213990,120212580 Gene ID= ENSG00000089159.16 TPM= 13.08 Transcript Type= protein_coding chr12 120302321 120313249 120302321 120313249 + ENST00000202967.4@SIRT4 ENST00000202967.4 protein_coding 120302321,120303561,120312456,120312884 120302378,120304058,120312750,120313249 Gene ID= ENSG00000089163.4 TPM= 9.96 Transcript Type= protein_coding chr12 120322111 120327789 120322111 120327789 - ENST00000308366.8@PLA2G1B ENST00000308366.8 protein_coding 120327720,120325861,120324934,120322111 120327789,120326020,120325061,120322317 Gene ID= ENSG00000170890.13 TPM= 3.62 Transcript Type= protein_coding chr12 120438090 120440742 120438090 120440742 + ENST00000229379.2@COX6A1 ENST00000229379.2 protein_coding 120438090,120438379,120440454 120438229,120438521,120440742 Gene ID= ENSG00000111775.2 TPM= 343.2 Transcript Type= protein_coding chr12 120443961 120446412 120443961 120446412 - ENST00000546954.1@TRIAP1 ENST00000546954.1 protein_coding 120446226,120443961 120446412,120444955 Gene ID= ENSG00000170855.3 TPM= 28.07 Transcript Type= protein_coding chr12 120446438 120463749 120446438 120463749 + ENST00000551765.5@GATC ENST00000551765.5 protein_coding 120446438,120446657,120457076,120459907 120446561,120446829,120457179,120463749 Gene ID= ENSG00000257218.5 TPM= 15.39 Transcript Type= protein_coding chr12 120461668 120469793 120461668 120469793 - ENST00000229390.7@SRSF9 ENST00000229390.7 protein_coding 120469422,120465627,120463950,120461668 120469793,120465787,120464122,120462162 Gene ID= ENSG00000111786.8 TPM= 271.21 Transcript Type= protein_coding chr12 120469850 120498493 120469850 120498493 + ENST00000392509.6@DYNLL1 ENST00000392509.6 protein_coding 120469850,120496416,120498073 120470104,120496553,120498493 Gene ID= ENSG00000088986.10 TPM= 5.43 Transcript Type= protein_coding chr12 120496056 120498493 120496056 120498493 + ENST00000242577.10@DYNLL1 ENST00000242577.10 protein_coding 120496056,120496416,120498073 120496216,120496553,120498493 Gene ID= ENSG00000088986.10 TPM= 138.55 Transcript Type= protein_coding chr12 120496091 120498491 120496091 120498491 + ENST00000392508.2@DYNLL1 ENST00000392508.2 protein_coding 120496091,120496402,120498073 120496216,120496553,120498491 Gene ID= ENSG00000088986.10 TPM= 6.34 Transcript Type= protein_coding chr12 120503275 120529161 120503275 120529161 - transcript4186.chr12.nic@COQ5 transcript4186.chr12.nic protein_coding 120528940,120526457,120522214,120516567,120510017,120504895,120503970,120503275 120529161,120526546,120522363,120516788,120510123,120504983,120504081,120503885 Gene ID= ENSG00000110871.14 TPM= 7.24 Transcript Type= NA chr12 120503274 120529182 120503274 120529182 - ENST00000288532.10@COQ5 ENST00000288532.10 protein_coding 120528940,120522214,120516567,120510017,120504895,120503970,120503274 120529182,120522363,120516788,120510123,120504983,120504081,120503885 Gene ID= ENSG00000110871.14 TPM= 71.54 Transcript Type= protein_coding chr12 120503275 120535225 120503275 120535225 - transcript4189.chr12.nnic@COQ5 transcript4189.chr12.nnic protein_coding 120535086,120522214,120516567,120510017,120504895,120503970,120503275 120535225,120522363,120516788,120510123,120504983,120504081,120503885 Gene ID= ENSG00000110871.14 TPM= 1.81 Transcript Type= NA chr12 120534351 120577594 120534351 120577594 + ENST00000325954.8@RNF10 ENST00000325954.8 protein_coding 120534351,120546405,120552499,120554718,120557282,120557546,120560726,120562945,120563347,120563810,120565072,120565428,120566825,120571191,120575631,120575792,120576590 120534968,120546601,120552698,120554808,120557466,120557682,120560886,120563070,120563623,120563943,120565189,120565529,120566980,120571291,120575688,120575950,120577594 Gene ID= ENSG00000022840.15 TPM= 614.95 Transcript Type= protein_coding chr12 120579006 120581381 120579006 120581381 - transcript4195.chr12.nic@POP5 transcript4195.chr12.nic protein_coding 120581343,120579514,120579006 120581381,120581257,120579412 Gene ID= ENSG00000167272.10 TPM= 3.17 Transcript Type= NA chr12 120579045 120581398 120579045 120581398 - ENST00000357500.4@POP5 ENST00000357500.4 protein_coding 120581343,120581115,120579774,120579514,120579045 120581398,120581257,120579923,120579597,120579412 Gene ID= ENSG00000167272.10 TPM= 49.35 Transcript Type= protein_coding chr12 120687091 120701862 120687091 120701862 + transcript4198.chr12.nic@MLEC transcript4198.chr12.nic protein_coding 120687091,120694091,120694824,120695095,120696316,120700464 120687531,120694269,120695000,120695152,120696541,120701862 Gene ID= ENSG00000110917.7 TPM= 43.47 Transcript Type= NA chr12 120686869 120701864 120686869 120701864 + ENST00000228506.7@MLEC ENST00000228506.7 protein_coding 120686869,120694091,120694824,120695095,120696316 120687531,120694269,120695000,120695152,120701864 Gene ID= ENSG00000110917.7 TPM= 182.01 Transcript Type= protein_coding chr12 120708242 120711198 120708242 120711198 - transcript4204.chr12.nnic@NA transcript4204.chr12.nnic NA 120711161,120710437,120708242 120711198,120710990,120708355 Gene ID= novel_gene_chr12_4205 TPM= 1.81 Transcript Type= NA chr12 120710435 120723640 120710435 120723640 + ENST00000344651.4@UNC119B ENST00000344651.4 protein_coding 120710435,120713274,120716628,120716870,120719920 120710718,120713387,120716739,120717042,120723640 Gene ID= ENSG00000175970.10 TPM= 57.05 Transcript Type= protein_coding chr12 120725735 120740008 120725735 120740008 + ENST00000242592.8@ACADS ENST00000242592.8 protein_coding 120725735,120727026,120736986,120737356,120737837,120738280,120738533,120738820,120739140,120739296 120725931,120727189,120737135,120737467,120737988,120738450,120738670,120738915,120739196,120740008 Gene ID= ENSG00000122971.8 TPM= 505.9 Transcript Type= protein_coding chr12 120725797 120740008 120725797 120740008 + transcript4211.chr12.nic@ACADS transcript4211.chr12.nic protein_coding 120725797,120727026,120736986,120737837,120738280,120738533,120738820,120739140,120739296 120725931,120727189,120737467,120737988,120738450,120738670,120738915,120739196,120740008 Gene ID= ENSG00000122971.8 TPM= 19.62 Transcript Type= NA chr12 120762510 120904371 120762510 120904371 - ENST00000353487.6@SPPL3 ENST00000353487.6 protein_coding 120903845,120810809,120791469,120784474,120783674,120782655,120768953,120768325,120767394,120766263,120762510 120904371,120810886,120791557,120784593,120783752,120782767,120769059,120768488,120767593,120766372,120765070 Gene ID= ENSG00000157837.15 TPM= 119.53 Transcript Type= protein_coding chr12 121002445 121016492 121002445 121016492 - transcript4228.chr12.nic@C12orf43 transcript4228.chr12.nic protein_coding 121016330,121011104,121010828,121006321,121005003,121002445 121016492,121011146,121010926,121006394,121005093,121004492 Gene ID= ENSG00000157895.11 TPM= 7.24 Transcript Type= NA chr12 121000486 121016487 121000486 121016487 - ENST00000288757.7@C12orf43 ENST00000288757.7 protein_coding 121016330,121011104,121010828,121006321,121005003,121000486 121016487,121011146,121010926,121006394,121005093,121004489 Gene ID= ENSG00000157895.11 TPM= 6.34 Transcript Type= protein_coding chr12 121019111 121039242 121019111 121039242 - ENST00000257570.9@OASL ENST00000257570.9 protein_coding 121038774,121033461,121031442,121027576,121023990,121019111 121039242,121033743,121031617,121027817,121024137,121021058 Gene ID= ENSG00000135114.12 TPM= 1.81 Transcript Type= protein_coding chr12 121132828 121188032 121132828 121188032 + ENST00000328963.9@P2RX7 ENST00000328963.9 protein_coding 121132828,121154785,121156079,121160902,121162424,121165357,121166058,121167488,121175388,121177147,121177297,121180354,121184305 121133095,121154953,121156147,121160974,121162520,121165437,121166187,121167624,121175478,121177212,121177446,121180455,121188032 Gene ID= ENSG00000089041.16 TPM= 7.24 Transcript Type= protein_coding chr12 121209857 121234106 121209857 121234106 + ENST00000337233.8@P2RX4 ENST00000337233.8 protein_coding 121209857,121217134,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523 121210298,121217281,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234106 Gene ID= ENSG00000135124.14 TPM= 46.93 Transcript Type= protein_coding chr12 121210129 121234106 121210129 121234106 + ENST00000543984.5@P2RX4 ENST00000543984.5 protein_coding 121210129,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523 121210298,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234106 Gene ID= ENSG00000135124.14 TPM= 1.66 Transcript Type= nonsense_mediated_decay chr12 121210134 121234110 121210134 121234110 + transcript4244.chr12.nic@P2RX4 transcript4244.chr12.nic protein_coding 121210134,121228533,121228725,121228963,121232414,121232611,121232997,121233523 121210298,121228613,121228866,121229099,121232507,121232676,121233092,121234110 Gene ID= ENSG00000135124.14 TPM= 2.11 Transcript Type= NA chr12 121210065 121234070 121210065 121234070 + ENST00000359949.11@P2RX4 ENST00000359949.11 protein_coding 121210065,121216955,121217134,121221913,121222094,121222947,121228533,121228725,121228963,121232414,121232611,121232997,121233523 121210298,121217002,121217281,121221984,121222166,121223043,121228613,121228866,121229099,121232507,121232676,121233092,121234070 Gene ID= ENSG00000135124.14 TPM= 2.72 Transcript Type= protein_coding chr12 121237691 121296708 121237691 121296708 - transcript4247.chr12.nnic@CAMKK2 transcript4247.chr12.nnic protein_coding 121296638,121293152,121274056,121270898,121269528,121268638,121263806,121260319,121255783,121255550,121253273,121252661,121249961,121249787,121248606,121245140,121237691 121296708,121293274,121274585,121270945,121269581,121268689,121263939,121260355,121255804,121255638,121253472,121252714,121250034,121249874,121248734,121245240,121240869 Gene ID= ENSG00000110931.18 TPM= 7.24 Transcript Type= NA chr12 121237691 121296765 121237691 121296765 - transcript4254.chr12.nic@CAMKK2 transcript4254.chr12.nic protein_coding 121296638,121274056,121270898,121269528,121268638,121263806,121260319,121255783,121255550,121253273,121252661,121249961,121249787,121245140,121237691 121296765,121274585,121270945,121269581,121268689,121263939,121260355,121255804,121255638,121253472,121252714,121250034,121249874,121245240,121240869 Gene ID= ENSG00000110931.18 TPM= 19.92 Transcript Type= NA chr12 121308357 121352462 121308357 121352462 - ENST00000261819.7@ANAPC5 ENST00000261819.7 protein_coding 121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357 121352462,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328497,121327231,121320459,121319818,121318608,121318424,121309863,121308691 Gene ID= ENSG00000089053.12 TPM= 90.82 Transcript Type= protein_coding chr12 121308357 121352388 121308357 121352388 - ENST00000541887.5@ANAPC5 ENST00000541887.5 protein_coding 121352134,121347802,121346896,121345839,121342003,121337291,121335533,121331347,121330583,121328316,121327096,121320385,121319697,121318501,121318277,121309701,121308357 121352388,121347881,121347005,121346031,121342069,121337392,121335723,121331428,121330672,121328458,121327231,121320459,121319818,121318608,121318424,121309863,121308691 Gene ID= ENSG00000089053.12 TPM= 98.74 Transcript Type= protein_coding chr12 121400119 121424348 121400119 121424348 + ENST00000392465.7@RNF34 ENST00000392465.7 protein_coding 121400119,121402742,121416159,121417504,121420242,121420577,121423386 121400218,121402807,121416377,121417911,121420334,121420778,121424348 Gene ID= ENSG00000170633.16 TPM= 1.81 Transcript Type= protein_coding chr12 121429189 121580432 121429189 121580432 - transcript4287.chr12.nic@KDM2B transcript4287.chr12.nic protein_coding 121580020,121578802,121575781,121574547,121549460,121548877,121534497,121532806,121520985,121513276,121509567,121494579,121453120,121445275,121444450,121444012,121443680,121442992,121442157,121441070,121440816,121439857,121429189 121580432,121578946,121575859,121574593,121549638,121548983,121534590,121532959,121521100,121513402,121510039,121494665,121453344,121445418,121444536,121444272,121443793,121443030,121442836,121441233,121440977,121440075,121430469 Gene ID= ENSG00000089094.18 TPM= 4.53 Transcript Type= NA chr12 121429189 121467391 121429189 121467391 - transcript4291.chr12.nic@KDM2B transcript4291.chr12.nic protein_coding 121467158,121453120,121445275,121444450,121444012,121443680,121442992,121442157,121441070,121440816,121439857,121429189 121467391,121453344,121445418,121444536,121444272,121443793,121443030,121442836,121441233,121440977,121440075,121430469 Gene ID= ENSG00000089094.18 TPM= 5.43 Transcript Type= NA chr12 121516377 121580261 121516377 121580261 - transcript4292.chr12.nic@KDM2B transcript4292.chr12.nic protein_coding 121580020,121578802,121575781,121574547,121549460,121548877,121534497,121532806,121520985,121516377 121580261,121578946,121575859,121574593,121549638,121548983,121534590,121532959,121521100,121516863 Gene ID= ENSG00000089094.18 TPM= 1.81 Transcript Type= NA chr12 121712742 121782063 121712742 121782063 + transcript4299.chr12.nnic@TMEM120B transcript4299.chr12.nnic protein_coding 121712742,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609,121779549,121780941,121781322 121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121776444,121779623,121781142,121782063 Gene ID= ENSG00000188735.12 TPM= 2.72 Transcript Type= NA chr12 121712795 121782062 121712795 121782062 + ENST00000449592.6@TMEM120B ENST00000449592.6 protein_coding 121712795,121743629,121748326,121750380,121752128,121761649,121770907,121771488,121773421,121774658,121775062,121775609 121712964,121743747,121748442,121750439,121752223,121761738,121770972,121771549,121773513,121774722,121775130,121782062 Gene ID= ENSG00000188735.12 TPM= 8.15 Transcript Type= protein_coding chr12 121888784 121916643 121888784 121916643 + transcript4311.chr12.nnic@PSMD9 transcript4311.chr12.nnic protein_coding 121888784,121894739,121899634,121903006,121915856,121916284 121888994,121894841,121899898,121903107,121915944,121916643 Gene ID= ENSG00000110801.13 TPM= 3.62 Transcript Type= NA chr12 121931779 121969965 121931779 121969965 + transcript4312.chr12.nic@WDR66 transcript4312.chr12.nic protein_coding 121931779,121934247,121942534,121942895,121948984,121951480,121954120,121957074,121958272,121958943,121960585,121961978,121966955,121968006,121969682 121931886,121934356,121942645,121942975,121949061,121951530,121954334,121957268,121958522,121959094,121960758,121962162,121967069,121968169,121969965 Gene ID= ENSG00000158023.9 TPM= 2.72 Transcript Type= NA chr12 122078756 122144419 122078756 122144419 + transcript4317.chr12.nnic@MLXIP transcript4317.chr12.nnic protein_coding 122078756,122127256,122127883,122129137,122129588,122129941,122130844,122132292,122133348,122135236,122135489,122137469,122138194,122138424,122138815,122140954,122141691 122079266,122127362,122127968,122129226,122129629,122130112,122130933,122132383,122133987,122135345,122135666,122137590,122138295,122138551,122138938,122141083,122144419 Gene ID= ENSG00000175727.13 TPM= 15.69 Transcript Type= NA chr12 122133365 122144419 122133365 122144419 + transcript4320.chr12.nic@MLXIP transcript4320.chr12.nic protein_coding 122133365,122135489,122137469,122138194,122138424,122138815,122140954,122141691 122135345,122135666,122137590,122138295,122138551,122138938,122141083,122144419 Gene ID= ENSG00000175727.13 TPM= 17.5 Transcript Type= NA chr12 122078722 122147347 122078722 122147347 + ENST00000319080.11@MLXIP ENST00000319080.11 protein_coding 122078722,122127256,122127883,122129137,122129588,122129941,122130844,122132292,122133348,122135224,122135489,122137469,122138194,122138424,122138815,122140954,122141691 122079266,122127362,122127968,122129226,122129629,122130112,122130933,122132383,122133987,122135345,122135666,122137590,122138295,122138551,122138938,122141083,122147347 Gene ID= ENSG00000175727.13 TPM= 88.14 Transcript Type= protein_coding chr12 122207663 122225771 122207663 122225771 - transcript4323.chr12.nnic@DIABLO transcript4323.chr12.nnic protein_coding 122225630,122224512,122218266,122216759,122216488,122207663 122225771,122224644,122218397,122216869,122216584,122208577 Gene ID= ENSG00000184047.16 TPM= 3.02 Transcript Type= NA chr12 122207663 122226055 122207663 122226055 - transcript4325.chr12.nic@DIABLO transcript4325.chr12.nic protein_coding 122225965,122224512,122218266,122216759,122216488,122207663 122226055,122224644,122218397,122216869,122216584,122208577 Gene ID= ENSG00000184047.16 TPM= 37.43 Transcript Type= NA chr12 122207662 122226052 122207662 122226052 - ENST00000353548.10@DIABLO ENST00000353548.10 protein_coding 122225965,122224512,122216759,122216488,122207662 122226052,122224644,122216869,122216584,122208577 Gene ID= ENSG00000184047.16 TPM= 3.92 Transcript Type= protein_coding chr12 122229565 122266529 122229565 122266529 - transcript4333.chr12.nic@VPS33A transcript4333.chr12.nic protein_coding 122266307,122264134,122263572,122261261,122250983,122249871,122239878,122238587,122235786,122232800,122229565 122266529,122264199,122263699,122261447,122251099,122250045,122239945,122238724,122235923,122232968,122232427 Gene ID= ENSG00000139719.9 TPM= 4.53 Transcript Type= NA chr12 122229564 122266521 122229564 122266521 - ENST00000267199.8@VPS33A ENST00000267199.8 protein_coding 122266307,122264134,122263572,122261261,122250983,122249871,122244569,122242382,122239878,122238587,122235786,122232800,122229564 122266521,122264199,122263699,122261447,122251099,122250045,122244762,122242508,122239945,122238724,122235923,122232968,122232427 Gene ID= ENSG00000139719.9 TPM= 51.62 Transcript Type= protein_coding chr12 122271428 122422607 122271428 122422607 - transcript4338.chr12.nnic@CLIP1 transcript4338.chr12.nnic protein_coding 122422521,122417327,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122340753,122336632,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288489,122279028,122278792,122278154,122274038,122271428 122422607,122417463,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122341697,122336748,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541,122279145,122278942,122278203,122274162,122273100 Gene ID= ENSG00000130779.19 TPM= 7.24 Transcript Type= NA chr12 122271434 122422569 122271434 122422569 - ENST00000358808.6@CLIP1 ENST00000358808.6 protein_coding 122422521,122380368,122377389,122363983,122360959,122355115,122354453,122352726,122347375,122340753,122336632,122334648,122334027,122332987,122328261,122327947,122319232,122316749,122309762,122288489,122279028,122278792,122278154,122274038,122271434 122422569,122380558,122377960,122364107,122361181,122355312,122354556,122352786,122347479,122341697,122336748,122334705,122334110,122333143,122328426,122328162,122319348,122316855,122309882,122288541,122279145,122278942,122278203,122274162,122273100 Gene ID= ENSG00000130779.19 TPM= 5.43 Transcript Type= protein_coding chr12 122472892 122501000 122472892 122501000 - transcript4347.chr12.nnic@ZCCHC8 transcript4347.chr12.nnic protein_coding 122500640,122498827,122492715,122490462,122489386,122483460,122483279,122482635,122481945,122481522,122480190,122478206,122477841,122472892 122501000,122498869,122492789,122490567,122489463,122483563,122483344,122482695,122482087,122481664,122480311,122478292,122477958,122474275 Gene ID= ENSG00000033030.13 TPM= 9.96 Transcript Type= NA chr12 122472892 122501000 122472892 122501000 - transcript4350.chr12.nnic@ZCCHC8 transcript4350.chr12.nnic protein_coding 122500640,122498827,122492715,122489386,122482635,122481945,122481522,122480190,122478206,122477841,122472892 122501000,122498869,122492789,122489463,122482695,122482087,122481664,122480311,122478292,122477958,122474275 Gene ID= ENSG00000033030.13 TPM= 1.81 Transcript Type= NA chr12 122505059 122526949 122505059 122526949 - transcript4352.chr12.nnic@RSRC2 transcript4352.chr12.nnic protein_coding 122526848,122522143,122521385,122520504,122518839,122517227,122515105,122513767,122511109,122508218,122506834,122505059 122526949,122522299,122521428,122520581,122519029,122517430,122515227,122513874,122511188,122508450,122506923,122505706 Gene ID= ENSG00000111011.17 TPM= 1.99 Transcript Type= NA chr12 122504723 122527015 122504723 122527015 - transcript4354.chr12.nic@RSRC2 transcript4354.chr12.nic protein_coding 122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122504723 122527015,122522299,122521428,122520581,122519029,122517430,122515227,122511188,122508447,122506923,122505706 Gene ID= ENSG00000111011.17 TPM= 3.8 Transcript Type= NA chr12 122504726 122527015 122504726 122527015 - transcript4361.chr12.nic@RSRC2 transcript4361.chr12.nic protein_coding 122526848,122522143,122521385,122518839,122517227,122515105,122511109,122508218,122506834,122504726 122527015,122522299,122521428,122519029,122517430,122515227,122511188,122508450,122506923,122505706 Gene ID= ENSG00000111011.17 TPM= 41.66 Transcript Type= NA chr12 122505059 122526936 122505059 122526936 - ENST00000433877.6@RSRC2 ENST00000433877.6 protein_coding 122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059 122526936,122522299,122521428,122520581,122519051,122517430,122515227,122511188,122508447,122506923,122505706 Gene ID= ENSG00000111011.17 TPM= 2.9 Transcript Type= nonsense_mediated_decay chr12 122505059 122527000 122505059 122527000 - ENST00000532695.5@RSRC2 ENST00000532695.5 protein_coding 122526848,122522143,122521385,122520504,122518839,122517227,122515105,122511109,122508218,122506834,122505059 122527000,122522299,122521428,122520581,122519029,122517430,122515227,122511188,122508450,122506923,122505706 Gene ID= ENSG00000111011.17 TPM= 5.61 Transcript Type= nonsense_mediated_decay chr12 122592119 122626390 122592119 122626390 + transcript4364.chr12.nic@KNTC1 transcript4364.chr12.nic protein_coding 122592119,122597731,122601536,122602569,122602829,122603027,122604564,122604877,122605306,122609384,122610822,122613112,122613626,122614991,122615470,122618343,122618482,122620479,122621881,122622462,122624598,122626205 122594385,122597938,122601625,122602740,122602887,122603243,122604637,122605087,122605415,122609430,122610900,122613230,122613761,122615086,122615526,122618397,122618545,122620608,122621970,122622607,122624688,122626390 Gene ID= ENSG00000184445.11 TPM= 1.81 Transcript Type= NA chr12 122752823 122770787 122752823 122770787 + transcript4365.chr12.nnic@DENR transcript4365.chr12.nnic protein_coding 122752823,122753693,122762187,122762845,122765304,122767488,122768782,122769034,122769314 122752950,122753807,122762206,122762929,122765387,122767604,122768921,122769293,122770787 Gene ID= ENSG00000139726.10 TPM= 1.81 Transcript Type= NA chr12 122752774 122771064 122752774 122771064 + ENST00000280557.10@DENR ENST00000280557.10 protein_coding 122752774,122753693,122762187,122762845,122765304,122767488,122768782,122769034 122752950,122753807,122762206,122762929,122765387,122767604,122768921,122771064 Gene ID= ENSG00000139726.10 TPM= 76.07 Transcript Type= protein_coding chr12 122834704 122862977 122834704 122862977 + transcript4368.chr12.nic@HIP1R transcript4368.chr12.nic protein_coding 122834704,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860148,122860423,122860679,122860916,122861131,122861308,122861706 122835006,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860077,122860210,122860523,122860784,122861039,122861192,122861514,122862977 Gene ID= ENSG00000130787.13 TPM= 5.43 Transcript Type= NA chr12 122835409 122862977 122835409 122862977 + transcript4370.chr12.nic@HIP1R transcript4370.chr12.nic protein_coding 122835409,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860423,122860679,122860916,122861131,122861308,122861706 122835643,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860210,122860523,122860784,122861039,122861192,122861514,122862977 Gene ID= ENSG00000130787.13 TPM= 5.43 Transcript Type= NA chr12 122835426 122862960 122835426 122862960 + ENST00000253083.8@HIP1R ENST00000253083.8 protein_coding 122835426,122848031,122848466,122848796,122849875,122850835,122851236,122854043,122854905,122855053,122855265,122855551,122855831,122855980,122856256,122856432,122856625,122857021,122858102,122858349,122858838,122859061,122859426,122859772,122860047,122860148,122860423,122860679,122860916,122861131,122861308,122861706 122835643,122848094,122848608,122848852,122849955,122850911,122851297,122854183,122854962,122855128,122855405,122855612,122855903,122856163,122856344,122856548,122856726,122857215,122858249,122858435,122858945,122859197,122859536,122859830,122860077,122860210,122860523,122860784,122861039,122861192,122861514,122862960 Gene ID= ENSG00000130787.13 TPM= 82.4 Transcript Type= protein_coding chr12 122865328 122896444 122865328 122896444 - ENST00000267202.6@VPS37B ENST00000267202.6 protein_coding 122895952,122870890,122868480,122865328 122896444,122871061,122868562,122867607 Gene ID= ENSG00000139722.6 TPM= 38.94 Transcript Type= protein_coding chr12 122928992 122966496 122928992 122966496 - ENST00000280560.12@ABCB9 ENST00000280560.12 protein_coding 122966287,122959635,122950451,122949788,122948624,122946025,122944391,122940807,122940111,122935272,122932192,122928992 122966496,122960322,122950565,122949918,122948829,122946222,122944519,122940995,122940284,122935431,122932328,122930171 Gene ID= ENSG00000150967.17 TPM= 7.24 Transcript Type= protein_coding chr12 122974727 122980043 122974727 122980043 + ENST00000536150.5@OGFOD2 ENST00000536150.5 protein_coding 122974727,122976654,122976871,122978442,122978753,122979083 122975121,122976767,122976970,122978569,122979010,122980043 Gene ID= ENSG00000111325.16 TPM= 1.99 Transcript Type= protein_coding chr12 122975188 122980045 122975188 122980045 + transcript4407.chr12.nic@OGFOD2 transcript4407.chr12.nic protein_coding 122975188,122975811,122976654,122976871,122978753,122979083 122975383,122975867,122976767,122978569,122979010,122980045 Gene ID= ENSG00000111325.16 TPM= 7.24 Transcript Type= NA chr12 122974752 122979438 122974752 122979438 + ENST00000545612.5@OGFOD2 ENST00000545612.5 protein_coding 122974752,122975811,122976654,122976871,122978360,122978753,122979083 122975121,122975867,122976767,122976970,122978569,122979010,122979438 Gene ID= ENSG00000111325.16 TPM= 1.99 Transcript Type= protein_coding chr12 122975220 122980041 122975220 122980041 + ENST00000228922.11@OGFOD2 ENST00000228922.11 protein_coding 122975220,122975811,122976654,122976871,122978442,122978753,122979083 122975383,122975867,122976767,122976970,122978569,122979010,122980041 Gene ID= ENSG00000111325.16 TPM= 36.4 Transcript Type= protein_coding chr12 122975252 122980040 122975252 122980040 + ENST00000540324.5@OGFOD2 ENST00000540324.5 protein_coding 122975252,122975811,122976601,122976871,122978325,122978442,122978753,122979083 122975383,122975867,122976767,122976963,122978359,122978569,122979010,122980040 Gene ID= ENSG00000111325.16 TPM= 2.9 Transcript Type= nonsense_mediated_decay chr12 122980679 122982909 122980679 122982909 + transcript4425.chr12.nic@ARL6IP4 transcript4425.chr12.nic protein_coding 122980679,122981129,122981571,122981957,122982469,122982620 122980812,122981299,122981879,122982074,122982538,122982909 Gene ID= ENSG00000182196.13 TPM= 8.71 Transcript Type= NA chr12 122980703 122982860 122980703 122982860 + ENST00000412505.6@ARL6IP4 ENST00000412505.6 protein_coding 122980703,122981129,122981595,122982031,122982469,122982620 122980812,122981266,122981809,122982074,122982538,122982860 Gene ID= ENSG00000182196.13 TPM= 4.71 Transcript Type= protein_coding chr12 122980721 122982873 122980721 122982873 + ENST00000536502.5@ARL6IP4 ENST00000536502.5 protein_coding 122980721,122981595,122981957,122982469,122982620 122981266,122981879,122982074,122982538,122982873 Gene ID= ENSG00000182196.13 TPM= 9.24 Transcript Type= retained_intron chr12 123000297 123151127 123000297 123151127 - transcript4452.chr12.nnic@PITPNM2 transcript4452.chr12.nnic protein_coding 123150753,123110385,123034513,123013828,123012613,123009850,123005240,123004394,123001054,123000778,123000297 123151127,123110488,123034685,123014042,123012734,123010077,123005548,123004489,123001158,123000848,123000478 Gene ID= ENSG00000090975.12 TPM= 4.53 Transcript Type= NA chr12 122983480 123110428 122983480 123110428 - ENST00000320201.8@PITPNM2 ENST00000320201.8 protein_coding 123110385,123034513,123013828,123012613,123009850,123005240,123004394,123001054,123000778,122997325,122996721,122996458,122995389,122994801,122992499,122990545,122989787,122988724,122988234,122987785,122987511,122987281,122986646,122986436,122983480 123110428,123034685,123014042,123012734,123010077,123005548,123004489,123001158,123000848,122997572,122996910,122996577,122995660,122994979,122992669,122990709,122989948,122988872,122988350,122987901,122987659,122987430,122986829,122986564,122986350 Gene ID= ENSG00000090975.12 TPM= 33.51 Transcript Type= protein_coding chr12 123232916 123257959 123232916 123257959 + ENST00000253233.5@C12orf65 ENST00000253233.5 protein_coding 123232916,123253647,123256813 123233531,123253956,123257959 Gene ID= ENSG00000130921.7 TPM= 42.56 Transcript Type= protein_coding chr12 123233481 123257959 123233481 123257959 + ENST00000366329.6@C12orf65 ENST00000366329.6 protein_coding 123233481,123253647,123256813 123233924,123253956,123257959 Gene ID= ENSG00000130921.7 TPM= 2.72 Transcript Type= protein_coding chr12 123260981 123272140 123260981 123272140 - ENST00000261692.6@CDK2AP1 ENST00000261692.6 protein_coding 123271564,123267185,123265196,123260981 123272140,123267282,123265322,123261803 Gene ID= ENSG00000111328.6 TPM= 181.11 Transcript Type= protein_coding chr12 123261003 123271141 123261003 123271141 - ENST00000535979.5@CDK2AP1 ENST00000535979.5 protein_coding 123270887,123267185,123265196,123261003 123271141,123267282,123265322,123261803 Gene ID= ENSG00000111328.6 TPM= 3.17 Transcript Type= protein_coding chr12 123364953 123366113 123364953 123366113 + ENST00000543072.1@AC137767.1 ENST00000543072.1 lincRNA 123364953,123365525 123365115,123366113 Gene ID= ENSG00000256092.2 TPM= 1.81 Transcript Type= lincRNA chr12 123383773 123409358 123383773 123409358 + ENST00000402868.7@KMT5A ENST00000402868.7 protein_coding 123383773,123389433,123390630,123395047,123396345,123403573,123404884,123407493 123384208,123389554,123390786,123395266,123396432,123403632,123405074,123409358 Gene ID= ENSG00000183955.12 TPM= 4.3 Transcript Type= protein_coding chr12 123388917 123409351 123388917 123409351 + transcript4481.chr12.nic@KMT5A transcript4481.chr12.nic protein_coding 123388917,123390630,123395047,123396345,123403573,123404884,123407493 123389182,123390786,123395266,123396432,123403632,123405074,123409351 Gene ID= ENSG00000183955.12 TPM= 12.9 Transcript Type= NA chr12 123388924 123409351 123388924 123409351 + transcript4482.chr12.nic@KMT5A transcript4482.chr12.nic protein_coding 123388924,123390630,123395047,123396345,123403573,123404884,123407493 123389554,123390786,123395266,123396432,123403632,123405074,123409351 Gene ID= ENSG00000183955.12 TPM= 7.92 Transcript Type= NA chr12 123388925 123409351 123388925 123409351 + transcript4483.chr12.nnic@KMT5A transcript4483.chr12.nnic protein_coding 123388925,123390711,123395047,123396345,123403573,123404884,123407493 123389182,123390786,123395266,123396432,123403632,123405074,123409351 Gene ID= ENSG00000183955.12 TPM= 2.94 Transcript Type= NA chr12 123415377 123436736 123415377 123436736 - transcript4490.chr12.nnic@RILPL2 transcript4490.chr12.nnic protein_coding 123436082,123423044,123415377 123436736,123423157,123415921 Gene ID= ENSG00000150977.10 TPM= 3.62 Transcript Type= NA chr12 123458119 123466389 123458119 123466389 + transcript4495.chr12.nnic@SNRNP35 transcript4495.chr12.nnic protein_coding 123458119,123458964,123459540,123465538 123458216,123459387,123459900,123466389 Gene ID= ENSG00000184209.14 TPM= 3.62 Transcript Type= NA chr12 123470054 123533718 123470054 123533718 - ENST00000376874.8@RILPL1 ENST00000376874.8 protein_coding 123533174,123523495,123499418,123498544,123485633,123484180,123470054 123533718,123523645,123499536,123498765,123485805,123484272,123472682 Gene ID= ENSG00000188026.12 TPM= 23.54 Transcript Type= protein_coding chr12 123584531 123598577 123584531 123598577 + ENST00000262225.7@TMED2 ENST00000262225.7 protein_coding 123584531,123586747,123590342,123596605 123584816,123586939,123590449,123598577 Gene ID= ENSG00000086598.10 TPM= 398.44 Transcript Type= protein_coding chr12 123602090 123620942 123602090 123620942 + transcript4509.chr12.nic@DDX55 transcript4509.chr12.nic protein_coding 123602090,123605931,123606073,123607432,123607600,123608680,123610003,123613170,123615185,123616511,123617758,123618669,123619448,123619964 123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619724,123620942 Gene ID= ENSG00000111364.15 TPM= 1.81 Transcript Type= NA chr12 123602105 123620942 123602105 123620942 + transcript4514.chr12.nic@DDX55 transcript4514.chr12.nic protein_coding 123602105,123607600,123608680,123609939,123613170,123615185,123616511,123617758,123618669,123619448,123619964 123602256,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619724,123620942 Gene ID= ENSG00000111364.15 TPM= 1.81 Transcript Type= NA chr12 123602099 123620941 123602099 123620941 + ENST00000238146.8@DDX55 ENST00000238146.8 protein_coding 123602099,123605931,123606073,123607432,123607600,123608680,123609939,123613170,123615185,123616511,123617758,123618669,123619432,123619964 123602256,123605981,123606159,123607523,123607662,123608829,123610128,123613252,123615316,123616603,123617872,123618837,123619724,123620941 Gene ID= ENSG00000111364.15 TPM= 9.06 Transcript Type= protein_coding chr12 123621026 123633680 123621026 123633680 - transcript4516.chr12.nnic@EIF2B1 transcript4516.chr12.nnic protein_coding 123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123621708,123621026 123633680,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920,123621511 Gene ID= ENSG00000111361.12 TPM= 3.17 Transcript Type= NA chr12 123620406 123633766 123620406 123633766 - ENST00000424014.6@EIF2B1 ENST00000424014.6 protein_coding 123633545,123632345,123630397,123630169,123627044,123626425,123624787,123622636,123620406 123633766,123632446,123630533,123630285,123627156,123626493,123624862,123622761,123621920 Gene ID= ENSG00000111361.12 TPM= 118.17 Transcript Type= protein_coding chr12 123633829 123662606 123633829 123662606 + ENST00000543341.6@GTF2H3 ENST00000543341.6 protein_coding 123633829,123639264,123645455,123647963,123650994,123652532,123652707,123654924,123655771,123659516,123659795,123660046,123660166 123633872,123639343,123645561,123648126,123651056,123652561,123652735,123654998,123655824,123659584,123659930,123660082,123662606 Gene ID= ENSG00000111358.13 TPM= 3.62 Transcript Type= protein_coding chr12 123671113 123708403 123671113 123708403 + ENST00000303372.6@TCTN2 ENST00000303372.6 protein_coding 123671113,123671507,123672056,123673615,123679189,123686836,123688051,123690533,123692658,123694842,123695220,123696415,123697087,123699704,123704532,123706726,123706985,123707604 123671322,123671614,123672132,123673810,123679289,123687035,123688177,123690674,123692723,123694976,123695297,123696495,123697198,123699810,123704688,123706851,123707073,123708403 Gene ID= ENSG00000168778.11 TPM= 3.62 Transcript Type= protein_coding chr12 123712318 123761755 123712318 123761755 + ENST00000330342.7@ATP6V0A2 ENST00000330342.7 protein_coding 123712318,123718623,123722351,123724654,123726197,123727783,123733926,123735531,123737059,123743785,123744201,123744597,123744882,123747607,123748575,123751110,123752283,123754420,123756815,123757927 123712682,123718701,123722448,123724791,123726285,123727909,123734008,123735624,123737271,123743935,123744337,123744784,123744972,123747725,123748785,123751229,123752402,123754537,123756986,123761755 Gene ID= ENSG00000185344.13 TPM= 17.21 Transcript Type= protein_coding chr12 123712340 123758277 123712340 123758277 + transcript4531.chr12.nic@ATP6V0A2 transcript4531.chr12.nic protein_coding 123712340,123718623,123722351,123724654,123726197,123727783,123733926,123735531,123737059,123743785,123744201,123744597,123744882,123747607,123748575,123751110,123752283,123754420,123757927 123712682,123718701,123722448,123724791,123726285,123727909,123734008,123735624,123737271,123743935,123744337,123744784,123744972,123747725,123748785,123751229,123752402,123756986,123758277 Gene ID= ENSG00000185344.13 TPM= 1.81 Transcript Type= NA chr12 123908245 123935716 123908245 123935716 + transcript4534.chr12.nic@DNAH10 transcript4534.chr12.nic protein_coding 123908245,123909261,123910536,123913098,123914329,123914852,123916457,123917584,123918676,123923763,123924278,123925050,123926637,123928387,123929275,123929664,123930402,123931341,123931636,123931941,123933331,123934621,123935335 123908556,123909442,123910672,123913315,123914550,123914999,123916736,123917813,123918949,123923867,123924432,123925204,123926820,123928587,123929484,123929759,123930573,123931472,123931847,123932108,123933511,123934766,123935716 Gene ID= ENSG00000197653.15 TPM= 3.62 Transcript Type= NA chr12 123936409 123972830 123936409 123972830 - transcript4538.chr12.nnic@CCDC92 transcript4538.chr12.nnic protein_coding 123972529,123944669,123944272,123943347,123942744,123936409 123972830,123944806,123944364,123943493,123942785,123937830 Gene ID= ENSG00000119242.8 TPM= 2.42 Transcript Type= NA chr12 123936409 123972741 123936409 123972741 - transcript4539.chr12.nic@CCDC92 transcript4539.chr12.nic protein_coding 123972529,123956284,123944272,123943347,123942744,123936409 123972741,123956444,123944364,123943493,123942785,123937830 Gene ID= ENSG00000119242.8 TPM= 3.32 Transcript Type= NA chr12 123936409 123972957 123936409 123972957 - transcript4540.chr12.nnic@CCDC92 transcript4540.chr12.nnic protein_coding 123972529,123944272,123943347,123942744,123936409 123972957,123944354,123943493,123942785,123937830 Gene ID= ENSG00000119242.8 TPM= 5.13 Transcript Type= NA chr12 123936436 123972734 123936436 123972734 - ENST00000545891.5@CCDC92 ENST00000545891.5 protein_coding 123972529,123943347,123942744,123936436 123972734,123943493,123942785,123937830 Gene ID= ENSG00000119242.8 TPM= 3.62 Transcript Type= protein_coding chr12 124295226 124316024 124295226 124316024 + ENST00000546355.3@RFLNA ENST00000546355.3 protein_coding 124295226,124311818,124314192 124295636,124311927,124316024 Gene ID= ENSG00000178882.14 TPM= 2.72 Transcript Type= protein_coding chr12 124472014 124567627 124472014 124567627 - transcript4551.chr12.nnic@NCOR2 transcript4551.chr12.nnic protein_coding 124567308,124495147,124486441,124483596,124472014 124567627,124495368,124486568,124483773,124473131 Gene ID= ENSG00000196498.13 TPM= 1.81 Transcript Type= NA chr12 124776856 124863917 124776856 124863917 - ENST00000339570.9@SCARB1 ENST00000339570.9 protein_coding 124863595,124817550,124814973,124814202,124811870,124810174,124807761,124800124,124795195,124787406,124786357,124776856 124863917,124817707,124815114,124814405,124811965,124810289,124807927,124800242,124795268,124787457,124786503,124778586 Gene ID= ENSG00000073060.15 TPM= 119.75 Transcript Type= protein_coding chr12 124777633 124863847 124777633 124863847 - ENST00000261693.10@SCARB1 ENST00000261693.10 protein_coding 124863595,124817550,124814973,124814202,124811870,124810174,124807761,124800124,124795195,124787406,124786357,124782683,124777633 124863847,124817707,124815114,124814405,124811965,124810289,124807927,124800242,124795268,124787457,124786503,124782811,124778586 Gene ID= ENSG00000073060.15 TPM= 1161.58 Transcript Type= protein_coding chr12 124911648 124915147 124911648 124915147 - ENST00000339647.5@UBC ENST00000339647.5 protein_coding 124914587,124911648 124915147,124913774 Gene ID= ENSG00000150991.14 TPM= 2196.85 Transcript Type= protein_coding chr12 124911646 124915303 124911646 124915303 - ENST00000538617.5@UBC ENST00000538617.5 protein_coding 124915166,124914587,124913321,124911646 124915303,124914762,124913774,124912180 Gene ID= ENSG00000150991.14 TPM= 6.79 Transcript Type= protein_coding chr12 124946826 124989122 124946826 124989122 - ENST00000539298.1@DHX37 ENST00000539298.1 protein_coding 124988917,124986096,124982511,124980490,124977342,124975419,124972503,124971302,124968867,124968534,124967123,124966793,124965668,124964930,124964394,124960312,124957029,124956691,124954087,124953880,124952398,124950690,124950413,124950149,124949986,124948084,124946826 124989122,124986265,124982623,124980838,124977490,124975511,124972599,124971415,124968968,124968648,124967218,124966878,124965812,124965006,124964626,124960423,124957135,124956879,124954211,124953996,124952570,124950804,124950550,124950243,124950059,124948181,124947887 Gene ID= ENSG00000150990.7 TPM= 21.73 Transcript Type= retained_intron chr12 125065378 125143319 125065378 125143319 + transcript4639.chr12.nnic@AACS transcript4639.chr12.nnic protein_coding 125065378,125073876,125076491,125086330,125091426,125102679,125103000,125107121,125114477,125118641,125124705,125128161,125129335,125134003,125134794,125136662,125142092 125065717,125073979,125076611,125086443,125091523,125102793,125103081,125107268,125114557,125118765,125124769,125128274,125129460,125134072,125134852,125136864,125143319 Gene ID= ENSG00000081760.16 TPM= 4.07 Transcript Type= NA chr12 125065379 125143320 125065379 125143320 + ENST00000316519.10@AACS ENST00000316519.10 protein_coding 125065379,125073876,125076491,125086330,125091426,125102679,125103000,125107121,125114477,125118641,125124705,125124902,125128161,125129335,125134003,125134794,125136662,125142092 125065717,125073979,125076611,125086443,125091523,125102793,125103081,125107268,125114557,125118765,125124769,125125024,125128274,125129460,125134072,125134852,125136864,125143320 Gene ID= ENSG00000081760.16 TPM= 47.54 Transcript Type= protein_coding chr12 128793193 128823970 128793193 128823970 - transcript4644.chr12.nic@SLC15A4 transcript4644.chr12.nic protein_coding 128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793193 128823970,128815070,128810053,128809473,128808956,128801009,128799417,128794356 Gene ID= ENSG00000139370.11 TPM= 2.26 Transcript Type= NA chr12 128793191 128823983 128793191 128823983 - ENST00000266771.9@SLC15A4 ENST00000266771.9 protein_coding 128823398,128814775,128809943,128809396,128808788,128800854,128799259,128793191 128823983,128815070,128810111,128809473,128808956,128801009,128799417,128794356 Gene ID= ENSG00000139370.11 TPM= 43.92 Transcript Type= protein_coding chr12 130789605 130839293 130789605 130839293 - transcript4655.chr12.nnic@STX2 transcript4655.chr12.nnic protein_coding 130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130795995,130789605 130839293,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130796120,130791916 Gene ID= ENSG00000111450.13 TPM= 1.81 Transcript Type= NA chr12 130789695 130839293 130789695 130839293 - transcript4657.chr12.nnic@STX2 transcript4657.chr12.nnic protein_coding 130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130789695 130839293,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130791916 Gene ID= ENSG00000111450.13 TPM= 1.81 Transcript Type= NA chr12 130789600 130839266 130789600 130839266 - ENST00000261653.10@STX2 ENST00000261653.10 protein_coding 130839070,130827193,130821689,130812957,130808631,130806982,130801415,130801153,130798525,130789600 130839266,130827267,130821788,130813031,130808704,130807090,130801488,130801290,130798635,130791977 Gene ID= ENSG00000111450.13 TPM= 12.68 Transcript Type= protein_coding chr12 130871879 130877678 130871879 130877678 + ENST00000543796.5@RAN ENST00000543796.5 protein_coding 130871879,130872584,130872836,130873003,130874546,130875612,130875882 130872126,130872629,130872920,130873128,130874733,130875782,130877678 Gene ID= ENSG00000132341.11 TPM= 340.03 Transcript Type= protein_coding chr12 130872037 130877676 130872037 130877676 + ENST00000448750.7@RAN ENST00000448750.7 protein_coding 130872037,130872836,130873003,130874546,130875612,130875882 130872126,130872920,130873128,130874733,130875782,130877676 Gene ID= ENSG00000132341.11 TPM= 4.53 Transcript Type= protein_coding chr12 130872070 130876281 130872070 130876281 + ENST00000392369.6@RAN ENST00000392369.6 protein_coding 130872070,130872836,130873003,130874546,130875612,130875882 130872629,130872920,130873128,130874733,130875782,130876281 Gene ID= ENSG00000132341.11 TPM= 10.57 Transcript Type= protein_coding chr12 131711060 131799737 131711060 131799737 + transcript4668.chr12.nic@SFSWAP transcript4668.chr12.nic protein_coding 131711060,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131766118,131778065,131786463,131797178,131799037,131799423 131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131766308,131778330,131786588,131797360,131799109,131799737 Gene ID= ENSG00000061936.9 TPM= 2.72 Transcript Type= NA chr12 131711089 131799737 131711089 131799737 + ENST00000261674.8@SFSWAP ENST00000261674.8 protein_coding 131711089,131714071,131714822,131719454,131725405,131726940,131728293,131753123,131754368,131755386,131756473,131764456,131766118,131778065,131786463,131797178,131799037,131799423 131711447,131714240,131714953,131719539,131725630,131727052,131728428,131753363,131754499,131755479,131756644,131764686,131766308,131778330,131786588,131797360,131799109,131799737 Gene ID= ENSG00000061936.9 TPM= 9.06 Transcript Type= protein_coding chr12 131894651 131923167 131894651 131923167 + ENST00000321867.5@ULK1 ENST00000321867.5 protein_coding 131894651,131895601,131895783,131906892,131907495,131908644,131908898,131909136,131909775,131909919,131910254,131910712,131911942,131913198,131913747,131914352,131915083,131915335,131915891,131916398,131916953,131917411,131918497,131919212,131919472,131919979,131921100,131921306 131895112,131895693,131895824,131906924,131907531,131908817,131908971,131909237,131909833,131910001,131910304,131910800,131912089,131913258,131913836,131914477,131915231,131915421,131916159,131916591,131917062,131917554,131918681,131919384,131919590,131920136,131921235,131923167 Gene ID= ENSG00000177169.9 TPM= 66.1 Transcript Type= protein_coding chr12 132136591 132144352 132136591 132144352 - transcript4692.chr12.nic@DDX51 transcript4692.chr12.nic protein_coding 132143993,132143695,132142728,132142277,132142119,132141850,132141498,132141103,132140831,132140620,132140423,132140098,132139861,132139635,132136591 132144352,132143909,132142878,132142422,132142190,132141956,132141606,132141420,132141020,132140735,132140539,132140199,132139924,132139769,132139298 Gene ID= ENSG00000185163.9 TPM= 3.02 Transcript Type= NA chr12 132136591 132144352 132136591 132144352 - transcript4693.chr12.nnic@DDX51 transcript4693.chr12.nnic protein_coding 132143993,132143695,132142728,132142277,132142119,132141850,132141498,132141103,132140831,132140620,132140423,132140098,132139861,132139635,132136591 132144352,132143909,132142878,132142422,132142190,132142001,132141606,132141420,132141020,132140735,132140539,132140199,132139924,132139769,132139298 Gene ID= ENSG00000185163.9 TPM= 2.11 Transcript Type= NA chr12 132136594 132144335 132136594 132144335 - ENST00000397333.3@DDX51 ENST00000397333.3 protein_coding 132143993,132143695,132142728,132142277,132142119,132141850,132141498,132141275,132140831,132140620,132140423,132140098,132139861,132139635,132136594 132144335,132143909,132142878,132142422,132142190,132141956,132141606,132141420,132141020,132140735,132140539,132140199,132139924,132139769,132139298 Gene ID= ENSG00000185163.9 TPM= 35.62 Transcript Type= protein_coding chr12 132144423 132152469 132144423 132152469 + transcript4704.chr12.nnic@NOC4L transcript4704.chr12.nnic protein_coding 132144423,132144854,132145559,132150981,132151258,132151484,132151738,132152084,132152282 132144605,132144974,132145665,132151041,132151368,132151644,132151820,132152197,132152469 Gene ID= ENSG00000184967.6 TPM= 3.17 Transcript Type= NA chr12 132144448 132152441 132144448 132152441 + ENST00000330579.5@NOC4L ENST00000330579.5 protein_coding 132144448,132144854,132145559,132147281,132147633,132147880,132148072,132148609,132148784,132150981,132151258,132151484,132151738,132152084,132152282 132144605,132144974,132145665,132147388,132147782,132147979,132148106,132148659,132148895,132151041,132151368,132151644,132151820,132152197,132152441 Gene ID= ENSG00000184967.6 TPM= 56.6 Transcript Type= protein_coding chr12 132490200 132585185 132490200 132585185 + transcript4712.chr12.nnic@FBRSL1 transcript4712.chr12.nnic protein_coding 132490200,132508153,132525734,132527953,132548003,132567481,132569926,132570335,132571068,132571307,132572288,132572527,132574090,132574319,132574493,132576799,132581439,132581741,132582062,132582971 132490861,132508350,132525823,132527988,132548032,132567526,132570241,132570540,132571136,132571524,132572344,132572622,132574158,132574348,132574564,132576931,132581516,132581824,132582266,132585185 Gene ID= ENSG00000112787.12 TPM= 6.04 Transcript Type= NA chr12 132490133 132585185 132490133 132585185 + transcript4713.chr12.nnic@FBRSL1 transcript4713.chr12.nnic protein_coding 132490133,132508153,132525734,132527953,132548003,132567481,132569926,132570335,132571068,132572288,132572527,132574090,132574319,132574493,132576799,132581439,132581741,132582062,132582971 132490861,132508350,132525823,132527988,132548032,132567526,132570241,132570540,132571231,132572344,132572622,132574158,132574348,132574564,132576931,132581516,132581824,132582266,132585185 Gene ID= ENSG00000112787.12 TPM= 16 Transcript Type= NA chr12 132490133 132585185 132490133 132585185 + transcript4714.chr12.nic@FBRSL1 transcript4714.chr12.nic protein_coding 132490133,132508153,132525734,132527953,132548003,132567481,132569926,132570335,132571307,132572288,132572527,132574090,132574319,132574493,132576799,132581439,132581741,132582062,132582971 132490861,132508350,132525823,132527988,132548032,132567526,132570241,132570540,132571524,132572344,132572622,132574158,132574348,132574564,132576931,132581516,132581824,132582266,132585185 Gene ID= ENSG00000112787.12 TPM= 9.66 Transcript Type= NA chr12 132507030 132511952 132507030 132511952 + ENST00000542061.2@FBRSL1 ENST00000542061.2 protein_coding 132507030,132507252,132508156,132509166 132507085,132507388,132508350,132511952 Gene ID= ENSG00000112787.12 TPM= 5.43 Transcript Type= protein_coding chr12 132490133 132511951 132490133 132511951 + transcript4718.chr12.nic@FBRSL1 transcript4718.chr12.nic protein_coding 132490133,132508153,132509166 132490861,132508350,132511951 Gene ID= ENSG00000112787.12 TPM= 13.58 Transcript Type= NA chr12 132623762 132687359 132623762 132687359 - ENST00000320574.9@POLE ENST00000320574.9 protein_coding 132687254,132681138,132680607,132680178,132679954,132679497,132677578,132677363,132676546,132676094,132675735,132675398,132673575,132673164,132672627,132672215,132668811,132668635,132668356,132667503,132665302,132664370,132664004,132661527,132660969,132659295,132657868,132657349,132657136,132649677,132649306,132648929,132643837,132643407,132643224,132642820,132642506,132642177,132641647,132639125,132638014,132635892,132634186,132632664,132632315,132626117,132625645,132624905,132623762 132687359,132681279,132680687,132680222,132680046,132679651,132677719,132677443,132676653,132676204,132675820,132675517,132673707,132673277,132672839,132672322,132668939,132668737,132668502,132667648,132665450,132664462,132664148,132661684,132661164,132659509,132657970,132657429,132657258,132649889,132649515,132649072,132643977,132643560,132643330,132642996,132642729,132642397,132641851,132639298,132638139,132636024,132634378,132632795,132632508,132626317,132625770,132624994,132624810 Gene ID= ENSG00000177084.16 TPM= 7.24 Transcript Type= protein_coding chr12 132687606 132704991 132687606 132704991 + ENST00000317479.7@PXMP2 ENST00000317479.7 protein_coding 132687606,132690263,132695884,132701250,132704619 132687792,132690376,132696046,132701369,132704991 Gene ID= ENSG00000176894.9 TPM= 31.69 Transcript Type= protein_coding chr12 132710768 132722730 132710768 132722730 + transcript4724.chr12.nnic@PGAM5 transcript4724.chr12.nnic protein_coding 132710768,132714858,132717439,132717710,132717987,132720678,132721855 132711067,132715036,132717564,132717798,132718120,132721274,132722730 Gene ID= ENSG00000247077.6 TPM= 4.83 Transcript Type= NA chr12 132710768 132722730 132710768 132722730 + transcript4725.chr12.nnic@PGAM5 transcript4725.chr12.nnic protein_coding 132710768,132714858,132717439,132717710,132717987,132720678,132721888 132711067,132715036,132717564,132717798,132718120,132721313,132722730 Gene ID= ENSG00000247077.6 TPM= 10.26 Transcript Type= NA chr12 132710768 132722730 132710768 132722730 + transcript4727.chr12.nnic@PGAM5 transcript4727.chr12.nnic protein_coding 132710768,132714858,132717439,132717710,132717987,132720678,132721854 132711067,132715036,132717564,132717798,132718120,132721331,132722730 Gene ID= ENSG00000247077.6 TPM= 2.11 Transcript Type= NA chr12 132710819 132722734 132710819 132722734 + ENST00000498926.6@PGAM5 ENST00000498926.6 protein_coding 132710819,132714858,132717439,132717710,132717987,132720678 132711067,132715036,132717564,132717798,132718120,132722734 Gene ID= ENSG00000247077.6 TPM= 17.21 Transcript Type= protein_coding chr12 132725669 132761852 132725669 132761852 - transcript4740.chr12.nnic@ANKLE2 transcript4740.chr12.nnic protein_coding 132761618,132756634,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725669 132761852,132756761,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443 Gene ID= ENSG00000176915.14 TPM= 16.37 Transcript Type= NA chr12 132725508 132761839 132725508 132761839 - transcript4742.chr12.nnic@ANKLE2 transcript4742.chr12.nnic protein_coding 132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132727223,132725508 132761839,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443,132726583 Gene ID= ENSG00000176915.14 TPM= 6.34 Transcript Type= NA chr12 132725669 132761843 132725669 132761843 - transcript4744.chr12.nnic@ANKLE2 transcript4744.chr12.nnic protein_coding 132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725669 132761843,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734496,132730270,132728163,132727443 Gene ID= ENSG00000176915.14 TPM= 6.11 Transcript Type= NA chr12 132725503 132761888 132725503 132761888 - ENST00000357997.9@ANKLE2 ENST00000357997.9 protein_coding 132761618,132754675,132750643,132748138,132747832,132743154,132741419,132736893,132735406,132734385,132729679,132728032,132725503 132761888,132755133,132750849,132748331,132748020,132743276,132741485,132737065,132735512,132734575,132730270,132728163,132727443 Gene ID= ENSG00000176915.14 TPM= 134.09 Transcript Type= protein_coding chr12 132813034 132828882 132813034 132828882 - transcript4780.chr12.nnic@GOLGA3 transcript4780.chr12.nnic protein_coding 132828803,132821996,132816660,132813034 132828882,132822311,132816812,132813419 Gene ID= ENSG00000090615.14 TPM= 1.81 Transcript Type= NA chr12 132812954 132828882 132812954 132828882 - transcript4781.chr12.nic@GOLGA3 transcript4781.chr12.nic protein_coding 132828803,132821996,132816540,132812954 132828882,132822311,132816812,132813419 Gene ID= ENSG00000090615.14 TPM= 1.81 Transcript Type= NA chr12 132840349 132887617 132840349 132887617 - transcript4761.chr12.nic@CHFR transcript4761.chr12.nic protein_coding 132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840349 132887617,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851734,132848724,132848155,132847130,132844134,132843083,132841596 Gene ID= ENSG00000072609.17 TPM= 6.82 Transcript Type= NA chr12 132840349 132887550 132840349 132887550 - transcript4767.chr12.nic@CHFR transcript4767.chr12.nic protein_coding 132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840349 132887550,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851734,132848724,132848155,132847130,132844134,132843083,132841596 Gene ID= ENSG00000072609.17 TPM= 2.29 Transcript Type= NA chr12 132840349 132887605 132840349 132887605 - transcript4768.chr12.nic@CHFR transcript4768.chr12.nic protein_coding 132887547,132887196,132877555,132872285,132870724,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840349 132887605,132887340,132877654,132872394,132870783,132861634,132859227,132857559,132856630,132853573,132851734,132848724,132848155,132847130,132844134,132843083,132841596 Gene ID= ENSG00000072609.17 TPM= 4.1 Transcript Type= NA chr12 132840352 132887623 132840352 132887623 - ENST00000450056.6@CHFR ENST00000450056.6 protein_coding 132887547,132887196,132877555,132872285,132870724,132869619,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352 132887623,132887340,132877654,132872394,132870783,132869798,132861634,132859227,132857559,132856630,132853573,132851737,132848724,132848155,132847130,132844134,132843083,132841596 Gene ID= ENSG00000072609.17 TPM= 12.86 Transcript Type= protein_coding chr12 132840352 132887603 132840352 132887603 - ENST00000443047.6@CHFR ENST00000443047.6 protein_coding 132887547,132887196,132877555,132872285,132861467,132859068,132857405,132856468,132853431,132851618,132848641,132848085,132847043,132844027,132843011,132840352 132887603,132887340,132877654,132872394,132861634,132859227,132857559,132856630,132853573,132851737,132848724,132848155,132847130,132844134,132843083,132841596 Gene ID= ENSG00000072609.17 TPM= 2.9 Transcript Type= protein_coding chr12 132986410 133012568 132986410 133012568 + transcript4785.chr12.nnic@ZNF26 transcript4785.chr12.nnic protein_coding 132986410,132987665,133007042,133007437,133010136 132986873,132987768,133007168,133007532,133012568 Gene ID= ENSG00000198393.7 TPM= 1.81 Transcript Type= NA chr12 133037292 133063298 133037292 133063298 + ENST00000392319.6@ZNF84 ENST00000392319.6 protein_coding 133037292,133041285,133047955,133048753,133056954 133037545,133041482,133048081,133048848,133063298 Gene ID= ENSG00000198040.10 TPM= 19.02 Transcript Type= protein_coding chr12 133080441 133107528 133080441 133107528 + transcript4795.chr12.nnic@ZNF140 transcript4795.chr12.nnic protein_coding 133080441,133080945,133081273,133083103,133083466,133105510 133080551,133081072,133081329,133083229,133083561,133107528 Gene ID= ENSG00000196387.9 TPM= 2.42 Transcript Type= NA chr12 133080314 133107425 133080314 133107425 + transcript4798.chr12.nnic@ZNF140 transcript4798.chr12.nnic protein_coding 133080314,133081273,133083103,133083466,133105510 133080551,133081329,133083229,133083561,133107425 Gene ID= ENSG00000196387.9 TPM= 3.32 Transcript Type= NA chr12 133079838 133107544 133079838 133107544 + ENST00000355557.6@ZNF140 ENST00000355557.6 protein_coding 133079838,133081273,133083103,133083466,133105510 133081072,133081329,133083229,133083561,133107544 Gene ID= ENSG00000196387.9 TPM= 9.66 Transcript Type= protein_coding chr12 133130589 133159461 133130589 133159461 + transcript4803.chr12.nic@ZNF10 transcript4803.chr12.nic protein_coding 133130589,133130837,133144434,133151028,133151809,133155503 133130754,133131014,133144525,133151154,133151904,133159461 Gene ID= ENSG00000256223.5 TPM= 1.81 Transcript Type= NA chr12 133181409 133214831 133181409 133214831 + ENST00000536435.6@ZNF268 ENST00000536435.6 protein_coding 133181409,133181946,133187872,133191489,133191908,133202144 133181686,133182030,133188072,133191615,133192003,133214831 Gene ID= ENSG00000090612.20 TPM= 10.87 Transcript Type= protein_coding chr12 133181559 133205173 133181559 133205173 + ENST00000541009.6@ZNF268 ENST00000541009.6 protein_coding 133181559,133181946,133187872,133191489,133191908,133193428,133202144 133181686,133182030,133188072,133191615,133192003,133193533,133205173 Gene ID= ENSG00000090612.20 TPM= 14.49 Transcript Type= protein_coding chr13 19633648 19673450 19633648 19673450 + transcript2.chr13.nic@MPHOSPH8 transcript2.chr13.nic protein_coding 19633648,19642115,19646443,19648422,19650003,19658995,19659201,19661698,19663040,19666425,19668377,19670236,19670840,19671206,19671834 19633961,19642270,19647291,19648521,19650260,19659120,19659289,19661838,19663126,19666579,19668531,19670363,19670964,19671289,19673450 Gene ID= ENSG00000196199.13 TPM= 3.62 Transcript Type= NA chr13 19633681 19673459 19633681 19673459 + ENST00000361479.9@MPHOSPH8 ENST00000361479.9 protein_coding 19633681,19642115,19646443,19648422,19650003,19658995,19659201,19661698,19663040,19666425,19668377,19670236,19671206,19671834 19633961,19642270,19647291,19648521,19650260,19659120,19659289,19661838,19663126,19666579,19668531,19670363,19671289,19673459 Gene ID= ENSG00000196199.13 TPM= 26.26 Transcript Type= protein_coding chr13 19675390 19782943 19675390 19782943 - transcript10.chr13.nnic@PSPC1 transcript10.chr13.nnic protein_coding 19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19677724,19675390 19782943,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19677823,19675653 Gene ID= ENSG00000121390.18 TPM= 1.81 Transcript Type= NA chr13 19702871 19783019 19702871 19783019 - ENST00000619300.4@PSPC1 ENST00000619300.4 protein_coding 19782917,19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19702871 19783019,19782791,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19703360 Gene ID= ENSG00000121390.18 TPM= 1.81 Transcript Type= protein_coding chr13 19674756 19782917 19674756 19782917 - ENST00000471658.5@PSPC1 ENST00000471658.5 protein_coding 19782386,19772242,19759323,19751271,19741565,19730239,19677724,19674756 19782917,19772543,19759418,19751467,19741649,19730344,19677823,19674984 Gene ID= ENSG00000121390.18 TPM= 8.15 Transcript Type= nonsense_mediated_decay chr13 19675388 19782942 19675388 19782942 - ENST00000492741.5@PSPC1 ENST00000492741.5 protein_coding 19782386,19772242,19759323,19751271,19741565,19730239,19677724,19675388 19782942,19772543,19759418,19751467,19741649,19730344,19677823,19675653 Gene ID= ENSG00000121390.18 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr13 19702500 19782917 19702500 19782917 - ENST00000338910.8@PSPC1 ENST00000338910.8 protein_coding 19782386,19772242,19759323,19751271,19741565,19730239,19709542,19705662,19702500 19782917,19772543,19759418,19751467,19741649,19730344,19709599,19705831,19703360 Gene ID= ENSG00000121390.18 TPM= 26.26 Transcript Type= protein_coding chr13 19823484 19863690 19823484 19863690 - transcript25.chr13.nnic@ZMYM5 transcript25.chr13.nnic protein_coding 19863450,19862399,19851689,19851355,19835477,19823484 19863690,19862466,19852190,19851448,19835689,19825235 Gene ID= ENSG00000132950.18 TPM= 1.81 Transcript Type= NA chr13 19823484 19863636 19823484 19863636 - ENST00000337963.8@ZMYM5 ENST00000337963.8 protein_coding 19863450,19862399,19851689,19851355,19838700,19837656,19835477,19823484 19863636,19862466,19852190,19851448,19838985,19837821,19835689,19825235 Gene ID= ENSG00000132950.18 TPM= 7.24 Transcript Type= protein_coding chr13 19958684 20087551 19958684 20087551 + transcript32.chr13.nic@ZMYM2 transcript32.chr13.nic protein_coding 19958684,19959958,19993063,19993826,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822 19958841,19960026,19993564,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20087551 Gene ID= ENSG00000121741.16 TPM= 2.56 Transcript Type= NA chr13 19958860 20089114 19958860 20089114 + transcript33.chr13.nnic@ZMYM2 transcript33.chr13.nnic protein_coding 19958860,19959958,19993063,19993826,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822 19958959,19960026,19993564,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20089114 Gene ID= ENSG00000121741.16 TPM= 5.28 Transcript Type= NA chr13 19958965 20087551 19958965 20087551 + transcript34.chr13.nnic@ZMYM2 transcript34.chr13.nnic protein_coding 19958965,19959958,19993063,19993826,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822 19959135,19960026,19993564,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20087551 Gene ID= ENSG00000121741.16 TPM= 5.28 Transcript Type= NA chr13 19958670 20091829 19958670 20091829 + ENST00000610343.4@ZMYM2 ENST00000610343.4 protein_coding 19958670,19959958,19993063,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822 19958841,19960026,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20091829 Gene ID= ENSG00000121741.16 TPM= 4.37 Transcript Type= protein_coding chr13 19958860 20088652 19958860 20088652 + transcript37.chr13.nnic@ZMYM2 transcript37.chr13.nnic protein_coding 19958860,19959958,19993063,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822 19958959,19960026,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20088652 Gene ID= ENSG00000121741.16 TPM= 4.37 Transcript Type= NA chr13 19958965 20088652 19958965 20088652 + transcript38.chr13.nnic@ZMYM2 transcript38.chr13.nnic protein_coding 19958965,19959958,19993063,20002850,20005074,20006374,20019547,20026612,20027203,20031319,20034254,20036737,20051433,20052277,20058575,20059447,20061053,20062846,20064451,20066851,20067239,20082016,20082781,20083656,20085822 19959135,19960026,19993919,20003135,20005239,20006586,20019618,20026762,20027318,20031435,20034404,20036909,20051598,20052311,20058704,20059562,20061224,20062971,20064545,20067019,20067390,20082130,20083032,20083776,20088652 Gene ID= ENSG00000121741.16 TPM= 8 Transcript Type= NA chr13 20403667 20525880 20403667 20525880 - transcript49.chr13.nnic@CRYL1 transcript49.chr13.nnic protein_coding 20525754,20512443,20489370,20432102,20413282,20404635,20403667 20525880,20512550,20489496,20432296,20413387,20404741,20404242 Gene ID= ENSG00000165475.13 TPM= 9.06 Transcript Type= NA chr13 20403667 20525857 20403667 20525857 - ENST00000298248.11@CRYL1 ENST00000298248.11 protein_coding 20525754,20512443,20489370,20439593,20432102,20413282,20404635,20403667 20525857,20512550,20489496,20439754,20432296,20413387,20404741,20404242 Gene ID= ENSG00000165475.13 TPM= 71.54 Transcript Type= protein_coding chr13 20567121 20691362 20567121 20691362 + transcript60.chr13.nnic@IFT88 transcript60.chr13.nnic protein_coding 20567121,20574380,20582957,20590967,20591618,20592335,20596150,20597015,20598651,20599451,20601705,20605035,20615793,20625750,20631016,20638332,20641290,20643455,20644843,20653876,20656365,20663498,20670973,20690705,20691054 20567256,20574475,20583019,20591020,20591681,20592404,20596240,20597119,20598753,20599565,20601933,20605105,20615879,20625849,20631102,20638518,20641398,20643605,20644958,20653928,20656430,20663604,20671039,20690815,20691362 Gene ID= ENSG00000032742.17 TPM= 5.43 Transcript Type= NA chr13 20703125 20723099 20703125 20723099 + transcript65.chr13.nic@IL17D transcript65.chr13.nic protein_coding 20703125,20703996,20721636 20703320,20704291,20723099 Gene ID= ENSG00000172458.4 TPM= 3.62 Transcript Type= NA chr13 20973032 21061547 20973032 21061547 - ENST00000382592.4@LATS2 ENST00000382592.4 protein_coding 21061346,21045685,20991272,20987881,20983224,20981466,20979691,20973032 21061547,21046230,20991404,20989304,20983806,20981648,20979797,20975364 Gene ID= ENSG00000150457.8 TPM= 3.62 Transcript Type= protein_coding chr13 21140506 21149091 21140506 21149091 + transcript70.chr13.nnic@SAP18 transcript70.chr13.nnic protein_coding 21140506,21140886,21145092,21146805,21147186 21140681,21140995,21145284,21146927,21149091 Gene ID= ENSG00000150459.12 TPM= 3.62 Transcript Type= NA chr13 21176645 21179084 21176645 21179084 + ENST00000309594.4@MRPL57 ENST00000309594.4 protein_coding 21176645,21176912 21176717,21179084 Gene ID= ENSG00000173141.4 TPM= 196.5 Transcript Type= protein_coding chr13 21372573 21459369 21372573 21459369 - ENST00000382466.7@ZDHHC20 ENST00000382466.7 protein_coding 21459054,21425652,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21372573 21459369,21425678,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381546,21376655 Gene ID= ENSG00000180776.15 TPM= 14.49 Transcript Type= protein_coding chr13 21372573 21459370 21372573 21459370 - ENST00000542645.5@ZDHHC20 ENST00000542645.5 protein_coding 21459054,21421061,21413652,21402797,21401653,21400373,21391722,21387508,21382920,21381434,21372573 21459370,21421164,21413772,21402866,21401685,21400493,21391854,21387634,21383009,21381549,21376655 Gene ID= ENSG00000180776.15 TPM= 3.62 Transcript Type= protein_coding chr13 21492700 21604214 21492700 21604214 - ENST00000382374.8@MICU2 ENST00000382374.8 protein_coding 21603939,21566797,21539657,21539302,21522603,21521245,21514353,21510004,21502926,21496052,21495161,21492700 21604214,21566944,21539688,21539377,21522650,21521327,21514418,21510101,21503097,21496160,21495318,21493353 Gene ID= ENSG00000165487.13 TPM= 84.22 Transcript Type= protein_coding chr13 23579380 23676093 23579380 23676093 + ENST00000382263.3@TNFRSF19 ENST00000382263.3 protein_coding 23579380,23590150,23593345,23615867,23626707,23659050,23660365,23667980,23668692,23673372 23579529,23590252,23593455,23616045,23626792,23659214,23660490,23668082,23669097,23676093 Gene ID= ENSG00000127863.15 TPM= 3.62 Transcript Type= protein_coding chr13 23730189 23889419 23730189 23889419 - ENST00000382172.3@MIPEP ENST00000382172.3 protein_coding 23889132,23886333,23881699,23879268,23874846,23870013,23869292,23864141,23862302,23858860,23841335,23839649,23837552,23836240,23809850,23805950,23760096,23756545,23730189 23889419,23886506,23881787,23879354,23874909,23870195,23869448,23864189,23862362,23858912,23841488,23839726,23837756,23836349,23809924,23806069,23760217,23756618,23730445 Gene ID= ENSG00000027001.9 TPM= 54.33 Transcript Type= protein_coding chr13 23938096 23946253 23938096 23946253 - transcript118.chr13.nnic@ANKRD20A19P transcript118.chr13.nnic transcribed_unprocessed_pseudogene 23946166,23945750,23941626,23941290,23938096 23946253,23945980,23941740,23941469,23940632 Gene ID= ENSG00000196593.9 TPM= 1.81 Transcript Type= NA chr13 24160716 24307074 24160716 24307074 + ENST00000382108.7@SPATA13 ENST00000382108.7 protein_coding 24160716,24222819,24249477,24251718,24284135,24286214,24286765,24288999,24290652,24294739,24297363,24300401,24302598 24160932,24224582,24249842,24251862,24284271,24286393,24286950,24289178,24290884,24294868,24297735,24300475,24307074 Gene ID= ENSG00000182957.15 TPM= 6.34 Transcript Type= protein_coding chr13 24160720 24278769 24160720 24278769 + transcript123.chr13.nic@SPATA13 transcript123.chr13.nic protein_coding 24160720,24222819,24249477,24251718,24278614 24160932,24224582,24249842,24251862,24278769 Gene ID= ENSG00000182957.15 TPM= 3.62 Transcript Type= NA chr13 24420927 24512786 24420927 24512786 - transcript126.chr13.nnic@PARP4 transcript126.chr13.nnic protein_coding 24512706,24506033,24503645,24501633,24500316,24499301,24498116,24494573,24493596,24492421,24490668,24486168,24484653,24478093,24477701,24475472,24469894,24469024,24459972,24459264,24459044,24456341,24455017,24453587,24452406,24449718,24447016,24446681,24443650,24442590,24441846,24434395,24431377,24426466,24420927 24512786,24506356,24503777,24501834,24500382,24499376,24498229,24494722,24493733,24492594,24490828,24486305,24484748,24478276,24477857,24475596,24470025,24469110,24460136,24459310,24459122,24456478,24455212,24453654,24452593,24449817,24447186,24446761,24443730,24442685,24441968,24435474,24431476,24426598,24421314 Gene ID= ENSG00000102699.5 TPM= 2.72 Transcript Type= NA chr13 24420927 24512817 24420927 24512817 - transcript132.chr13.nnic@PARP4 transcript132.chr13.nnic protein_coding 24512706,24503645,24501633,24500316,24499301,24498116,24494573,24493596,24492421,24490668,24486168,24484653,24478093,24477701,24475472,24469894,24469024,24459972,24459264,24459044,24455017,24453587,24452406,24449718,24447016,24446681,24443650,24442590,24441846,24434395,24431377,24426466,24420927 24512817,24503777,24501834,24500382,24499376,24498229,24494722,24493733,24492594,24490828,24486305,24484748,24478276,24477857,24475596,24470025,24469110,24460136,24459310,24459122,24455212,24453654,24452593,24449817,24447186,24446761,24443730,24442685,24441968,24435474,24431476,24426598,24421314 Gene ID= ENSG00000102699.5 TPM= 4.53 Transcript Type= NA chr13 24420926 24512810 24420926 24512810 - ENST00000381989.3@PARP4 ENST00000381989.3 protein_coding 24512706,24503645,24501633,24500316,24499301,24498116,24494573,24493596,24492421,24490668,24486168,24484653,24478093,24477701,24475472,24469894,24469024,24459972,24459264,24459044,24456341,24455017,24453587,24452406,24449718,24447016,24446681,24443650,24442590,24441846,24434395,24431377,24426466,24420926 24512810,24503777,24501834,24500382,24499376,24498229,24494722,24493733,24492594,24490828,24486305,24484748,24478276,24477857,24475596,24470025,24469110,24460136,24459310,24459122,24456478,24455212,24453654,24452593,24449817,24447186,24446761,24443730,24442685,24441968,24435474,24431476,24426598,24421314 Gene ID= ENSG00000102699.5 TPM= 59.77 Transcript Type= protein_coding chr13 25246201 25288009 25246201 25288009 - ENST00000381801.5@MTMR6 ENST00000381801.5 protein_coding 25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25251649,25246201 25288009,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25251775,25249492 Gene ID= ENSG00000139505.11 TPM= 137.49 Transcript Type= protein_coding chr13 25246224 25287542 25246224 25287542 - transcript149.chr13.nnic@MTMR6 transcript149.chr13.nnic protein_coding 25287224,25274071,25267779,25266129,25265819,25261668,25258560,25257736,25257196,25254385,25253764,25251853,25246224 25287542,25274187,25267941,25266286,25265947,25261802,25258692,25257845,25257321,25254434,25253964,25251984,25249492 Gene ID= ENSG00000139505.11 TPM= 7.7 Transcript Type= NA chr13 25301524 25342416 25301524 25342416 + ENST00000381736.7@NUP58 ENST00000381736.7 protein_coding 25301524,25307806,25309247,25312883,25313614,25315357,25319326,25320530,25320919,25324989,25326916,25327430,25331357,25336936,25338636,25339965 25301880,25307948,25309282,25313032,25313751,25315467,25319350,25320595,25321093,25325068,25327034,25327512,25331558,25337034,25338731,25342416 Gene ID= ENSG00000139496.15 TPM= 28.07 Transcript Type= protein_coding chr13 25371974 25862928 25371974 25862928 + transcript159.chr13.nnic@ATP8A2 transcript159.chr13.nnic protein_coding 25371974,25468977,25529999,25530562,25532272,25533273,25537988,25540319,25541919,25543291,25551338,25553793,25554991,25558973,25559721,25563956,25570767,25571610,25574808,25577069,25578815,25579808,25581819,25589635,25699173,25769046,25774849,25828118,25837163,25839546,25860195,25860804,25862301,25862500 25372288,25469121,25530098,25530660,25532317,25533313,25538061,25540388,25542046,25543402,25551503,25553920,25555068,25559061,25559765,25564031,25570872,25571692,25574857,25577138,25578899,25579947,25581957,25589699,25699345,25769229,25774959,25828192,25837285,25839624,25860256,25860860,25862408,25862928 Gene ID= ENSG00000132932.16 TPM= 4.53 Transcript Type= NA chr13 26212780 26222261 26212780 26222261 - transcript162.chr13.nnic@RNF6 transcript162.chr13.nnic protein_coding 26221782,26221248,26219457,26218511,26215474,26212780 26222261,26221330,26219667,26218606,26215592,26214769 Gene ID= ENSG00000127870.16 TPM= 3.8 Transcript Type= NA chr13 26212757 26222535 26212757 26222535 - transcript167.chr13.nic@RNF6 transcript167.chr13.nic protein_coding 26221835,26221248,26219457,26218511,26212757 26222535,26221330,26219667,26218606,26215592 Gene ID= ENSG00000127870.16 TPM= 7.2 Transcript Type= NA chr13 26212757 26222315 26212757 26222315 - transcript170.chr13.nic@RNF6 transcript170.chr13.nic protein_coding 26221248,26219457,26218511,26212757 26222315,26219667,26218606,26215592 Gene ID= ENSG00000127870.16 TPM= 2.67 Transcript Type= NA chr13 26212762 26221842 26212762 26221842 - ENST00000346166.7@RNF6 ENST00000346166.7 protein_coding 26221782,26221248,26219457,26218511,26212762 26221842,26221330,26219667,26218606,26215592 Gene ID= ENSG00000127870.16 TPM= 28.93 Transcript Type= protein_coding chr13 26212775 26221703 26212775 26221703 - ENST00000381570.7@RNF6 ENST00000381570.7 protein_coding 26221514,26221248,26219457,26218511,26212775 26221703,26221330,26219667,26218606,26215592 Gene ID= ENSG00000127870.16 TPM= 1.77 Transcript Type= protein_coding chr13 26254139 26405238 26254139 26405238 + ENST00000381527.7@CDK8 ENST00000381527.7 protein_coding 26254139,26337567,26349072,26353740,26382814,26385211,26393367,26396285,26397153,26400453,26401269,26401466,26403956 26254769,26337642,26349182,26353880,26382871,26385342,26393510,26396354,26397225,26400550,26401347,26401624,26405238 Gene ID= ENSG00000132964.11 TPM= 15.39 Transcript Type= protein_coding chr13 26557703 26688943 26557703 26688943 + ENST00000361042.8@WASF3 ENST00000361042.8 protein_coding 26557703,26612961,26642261,26665028,26667517,26671872,26680035,26681054,26682607,26685688 26557819,26613058,26642403,26665162,26667670,26671989,26680201,26681320,26682974,26688943 Gene ID= ENSG00000132970.12 TPM= 5.89 Transcript Type= protein_coding chr13 26557750 26688948 26557750 26688948 + ENST00000335327.5@WASF3 ENST00000335327.5 protein_coding 26557750,26612961,26642261,26665028,26667517,26671872,26676549,26681054,26682607,26685688 26557819,26613058,26642403,26665162,26667670,26671989,26676724,26681320,26682974,26688948 Gene ID= ENSG00000132970.12 TPM= 5.89 Transcript Type= protein_coding chr13 27066142 27171896 27066142 27171896 - ENST00000282344.10@USP12 ENST00000282344.10 protein_coding 27171592,27116516,27105731,27095601,27090082,27089883,27075191,27071071,27066142 27171896,27116596,27105944,27095830,27090158,27089966,27075388,27071149,27069384 Gene ID= ENSG00000152484.13 TPM= 7.24 Transcript Type= protein_coding chr13 27251309 27256568 27251309 27256568 + ENST00000311549.10@RPL21 ENST00000311549.10 protein_coding 27251309,27253765,27254220,27255242,27256184,27256436 27251585,27253843,27254281,27255354,27256334,27256568 Gene ID= ENSG00000122026.10 TPM= 37.58 Transcript Type= protein_coding chr13 27251579 27256568 27251579 27256568 + ENST00000272274.8@RPL21 ENST00000272274.8 protein_coding 27251579,27253765,27254220,27255242,27256184,27256436 27251656,27253843,27254281,27255354,27256334,27256568 Gene ID= ENSG00000122026.10 TPM= 1.36 Transcript Type= protein_coding chr13 27424582 27435692 27424582 27435692 + transcript186.chr13.nnic@GTF3A transcript186.chr13.nnic protein_coding 27424582,27427092,27429172,27429870,27430533,27432731,27434139,27434805,27435133,27435433 27424938,27427192,27429389,27429966,27430621,27432804,27434219,27435034,27435192,27435692 Gene ID= ENSG00000122034.14 TPM= 4.53 Transcript Type= NA chr13 27435639 27450590 27435639 27450590 - transcript192.chr13.nnic@MTIF3 transcript192.chr13.nnic protein_coding 27450509,27445088,27441017,27439989,27437116,27435639 27450590,27445156,27441242,27440449,27437273,27435893 Gene ID= ENSG00000122033.14 TPM= 2.49 Transcript Type= NA chr13 27435639 27450173 27435639 27450173 - transcript194.chr13.nic@MTIF3 transcript194.chr13.nic protein_coding 27450064,27445088,27439989,27437116,27435639 27450173,27445156,27440449,27437273,27435893 Gene ID= ENSG00000122033.14 TPM= 5.21 Transcript Type= NA chr13 27435639 27450362 27435639 27450362 - transcript195.chr13.nic@MTIF3 transcript195.chr13.nic protein_coding 27450142,27445088,27439989,27437116,27435639 27450362,27445156,27440449,27437273,27435893 Gene ID= ENSG00000122033.14 TPM= 7.02 Transcript Type= NA chr13 27435643 27450574 27435643 27450574 - ENST00000381120.7@MTIF3 ENST00000381120.7 protein_coding 27450509,27445088,27439989,27437116,27435643 27450574,27445156,27440449,27437273,27435893 Gene ID= ENSG00000122033.14 TPM= 27.85 Transcript Type= protein_coding chr13 27435684 27450131 27435684 27450131 - ENST00000461838.5@MTIF3 ENST00000461838.5 protein_coding 27450064,27445088,27439989,27437116,27435684 27450131,27445137,27440449,27437273,27435893 Gene ID= ENSG00000122033.14 TPM= 3.62 Transcript Type= processed_transcript chr13 27545915 27620585 27545915 27620585 - transcript199.chr13.nnic@LNX2 transcript199.chr13.nnic protein_coding 27620018,27581297,27569029,27567640,27562413,27559842,27556236,27553208,27550333,27545915 27620585,27581803,27569276,27567839,27562781,27559985,27556413,27553439,27550491,27548470 Gene ID= ENSG00000139517.7 TPM= 9.96 Transcript Type= NA chr13 27620743 27623453 27620743 27623453 + transcript208.chr13.nic@POLR1D transcript208.chr13.nic protein_coding 27620743,27621337,27622875 27621140,27622009,27623453 Gene ID= ENSG00000186184.16 TPM= 60.67 Transcript Type= NA chr13 27620770 27623453 27620770 27623453 + transcript211.chr13.nic@POLR1D transcript211.chr13.nic protein_coding 27620770,27621337,27622875 27621104,27622009,27623453 Gene ID= ENSG00000186184.16 TPM= 42.56 Transcript Type= NA chr13 27621779 27667415 27621779 27667415 + ENST00000399697.7@POLR1D ENST00000399697.7 protein_coding 27621779,27648379,27665686 27622009,27648453,27667415 Gene ID= ENSG00000186184.16 TPM= 48.9 Transcript Type= protein_coding chr13 28300344 28495095 28300344 28495095 - ENST00000282397.8@FLT1 ENST00000282397.8 protein_coding 28494780,28467521,28466903,28438221,28434058,28433819,28431136,28430050,28427752,28427159,28405780,28396960,28389796,28384885,28357554,28345445,28339168,28334025,28329615,28327462,28322790,28322262,28321463,28319423,28317498,28311993,28311590,28308843,28306678,28300344 28495095,28467617,28467129,28438345,28434220,28433955,28431310,28430167,28427921,28427318,28405894,28397068,28390104,28385031,28357685,28345551,28339300,28334129,28329728,28327550,28322946,28322359,28321585,28319534,28317597,28312098,28311732,28308927,28306772,28303368 Gene ID= ENSG00000102755.11 TPM= 12.68 Transcript Type= protein_coding chr13 28659104 28678925 28659104 28678925 + ENST00000380842.4@POMP ENST00000380842.4 protein_coding 28659104,28662410,28664509,28668473,28672339,28678035 28659187,28662507,28664569,28668574,28672432,28678925 Gene ID= ENSG00000132963.7 TPM= 261.7 Transcript Type= protein_coding chr13 28700080 28718990 28700080 28718990 - transcript229.chr13.nnic@SLC46A3 transcript229.chr13.nnic protein_coding 28718742,28717810,28712680,28710760,28703943,28700080 28718990,28718022,28713550,28710843,28704099,28701581 Gene ID= ENSG00000139508.14 TPM= 8.15 Transcript Type= NA chr13 28700080 28718841 28700080 28718841 - ENST00000266943.10@SLC46A3 ENST00000266943.10 protein_coding 28718496,28717810,28712680,28710760,28703943,28700080 28718841,28718022,28713550,28710843,28704099,28701581 Gene ID= ENSG00000139508.14 TPM= 38.03 Transcript Type= protein_coding chr13 28700717 28718970 28700717 28718970 - ENST00000380814.4@SLC46A3 ENST00000380814.4 protein_coding 28718496,28717810,28712680,28710760,28703943,28701501,28700717 28718970,28718022,28713550,28710843,28704099,28701581,28700956 Gene ID= ENSG00000139508.14 TPM= 2.72 Transcript Type= protein_coding chr13 29764371 29850684 29764371 29850684 - ENST00000380680.4@UBL3 ENST00000380680.4 protein_coding 29849512,29777155,29772112,29767618,29764371 29850684,29777263,29772198,29767695,29767307 Gene ID= ENSG00000122042.9 TPM= 72.44 Transcript Type= protein_coding chr13 30458797 30464883 30458797 30464883 - transcript240.chr13.nnic@HMGB1 transcript240.chr13.nnic protein_coding 30463815,30463531,30463207,30462538,30458797 30464883,30463694,30463352,30462712,30461533 Gene ID= ENSG00000189403.14 TPM= 23.7 Transcript Type= NA chr13 30456704 30465965 30456704 30465965 - ENST00000341423.9@HMGB1 ENST00000341423.9 protein_coding 30465796,30463531,30463207,30462538,30456704 30465965,30463694,30463352,30462712,30461533 Gene ID= ENSG00000189403.14 TPM= 157.56 Transcript Type= protein_coding chr13 30458797 30465370 30458797 30465370 - transcript249.chr13.nic@HMGB1 transcript249.chr13.nic protein_coding 30463531,30463207,30462538,30458797 30465370,30463352,30462712,30461533 Gene ID= ENSG00000189403.14 TPM= 15.55 Transcript Type= NA chr13 30459850 30464310 30459850 30464310 - ENST00000339872.8@HMGB1 ENST00000339872.8 protein_coding 30464161,30463531,30463207,30462538,30459850 30464310,30463694,30463352,30462712,30461533 Gene ID= ENSG00000189403.14 TPM= 18.56 Transcript Type= protein_coding chr13 30460907 30465242 30460907 30465242 - ENST00000399494.5@HMGB1 ENST00000399494.5 protein_coding 30465073,30463531,30463207,30462538,30460907 30465242,30463694,30463352,30462712,30461533 Gene ID= ENSG00000189403.14 TPM= 6.34 Transcript Type= protein_coding chr13 30617920 30659556 30617920 30659556 + transcript251.chr13.nic@USPL1 transcript251.chr13.nic protein_coding 30617920,30621764,30630835,30637744,30642628,30646932,30653148,30657474 30618056,30621892,30631474,30637857,30642757,30647057,30653305,30659556 Gene ID= ENSG00000132952.11 TPM= 5.43 Transcript Type= NA chr13 30735508 30764426 30735508 30764426 + ENST00000380490.4@ALOX5AP ENST00000380490.4 protein_coding 30735508,30744060,30752052,30755944,30763944 30735675,30744159,30752122,30756025,30764426 Gene ID= ENSG00000132965.9 TPM= 31.69 Transcript Type= protein_coding chr13 30906191 30925572 30906191 30925572 + ENST00000380482.8@MEDAG ENST00000380482.8 protein_coding 30906191,30917403,30921014,30921561,30924311 30906793,30917512,30921126,30921846,30925572 Gene ID= ENSG00000102802.9 TPM= 7.24 Transcript Type= protein_coding chr13 31136628 31162016 31136628 31162016 - transcript258.chr13.nic@HSPH1 transcript258.chr13.nic protein_coding 31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31137368,31136628 31162016,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524,31137117 Gene ID= ENSG00000120694.19 TPM= 5.89 Transcript Type= NA chr13 31135049 31161927 31135049 31161927 - ENST00000320027.9@HSPH1 ENST00000320027.9 protein_coding 31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31135049 31161927,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524 Gene ID= ENSG00000120694.19 TPM= 35.62 Transcript Type= protein_coding chr13 31134974 31162388 31134974 31162388 - ENST00000445273.6@HSPH1 ENST00000445273.6 protein_coding 31161982,31158806,31155514,31154633,31150947,31149954,31148374,31147959,31145563,31143792,31141122,31140184,31139000,31138781,31138407,31134974 31162388,31158863,31155654,31154755,31151191,31150182,31148480,31148092,31145768,31143923,31141259,31140309,31139107,31138900,31138568,31137524 Gene ID= ENSG00000120694.19 TPM= 1.66 Transcript Type= protein_coding chr13 31136628 31161927 31136628 31161927 - ENST00000380405.7@HSPH1 ENST00000380405.7 protein_coding 31161476,31158806,31155514,31154633,31152852,31151609,31150947,31149954,31148374,31147959,31145563,31141122,31140184,31139000,31138781,31138407,31136628 31161927,31158863,31155654,31154755,31152951,31151742,31151191,31150182,31148480,31148092,31145768,31141259,31140309,31139107,31138900,31138568,31137524 Gene ID= ENSG00000120694.19 TPM= 2.11 Transcript Type= protein_coding chr13 31199936 31332276 31199936 31332276 + ENST00000343307.4@B3GLCT ENST00000343307.4 protein_coding 31199936,31215051,31222952,31229185,31247023,31247855,31260946,31269214,31274509,31276702,31284648,31286720,31317566,31323751,31329501 31200154,31215100,31222991,31229294,31247099,31247966,31261082,31269277,31274628,31276771,31284761,31286819,31317685,31323895,31332276 Gene ID= ENSG00000187676.7 TPM= 20.83 Transcript Type= protein_coding chr13 32254120 32296656 32254120 32296656 + transcript271.chr13.nic@FRY transcript271.chr13.nic protein_coding 32254120,32261616,32262314,32265450,32267170,32274842,32276464,32278465,32289633,32294368,32295202 32254394,32261816,32262475,32265616,32267359,32274991,32276562,32278548,32289743,32294570,32296656 Gene ID= ENSG00000073910.20 TPM= 1.81 Transcript Type= NA chr13 32341166 32400258 32341166 32400258 + transcript272.chr13.nnic@BRCA2 transcript272.chr13.nnic protein_coding 32341166,32346827,32354861,32356428,32357742,32362523,32363179,32370402,32370956,32376670,32379317,32379750,32380007,32394689,32396898,32398162 32341196,32346896,32355288,32356609,32357929,32362693,32363533,32370557,32371100,32376791,32379515,32379913,32380145,32394933,32397044,32400258 Gene ID= ENSG00000139618.14 TPM= 1.81 Transcript Type= NA chr13 32400724 32428178 32400724 32428178 - ENST00000380130.6@N4BP2L1 ENST00000380130.6 protein_coding 32427904,32407645,32407250,32404321,32400724 32428178,32407772,32407338,32404397,32403200 Gene ID= ENSG00000139597.17 TPM= 7.24 Transcript Type= protein_coding chr13 32432780 32538795 32432780 32538795 - transcript279.chr13.nic@N4BP2L2 transcript279.chr13.nic protein_coding 32538618,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432780 32538795,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972 Gene ID= ENSG00000244754.8 TPM= 3.62 Transcript Type= NA chr13 32432525 32538823 32432525 32538823 - transcript280.chr13.nnic@N4BP2L2 transcript280.chr13.nnic protein_coding 32538683,32535769,32527408,32522182,32521373,32517857,32442388,32438652,32436361,32432525 32538823,32537027,32527532,32522270,32521449,32518003,32444126,32438737,32436405,32432972 Gene ID= ENSG00000244754.8 TPM= 3.62 Transcript Type= NA chr13 32516894 32538805 32516894 32538805 - transcript285.chr13.nic@N4BP2L2 transcript285.chr13.nic protein_coding 32538778,32538618,32535769,32527408,32522182,32521373,32516894 32538805,32538684,32537027,32527532,32522270,32521449,32518003 Gene ID= ENSG00000244754.8 TPM= 4.98 Transcript Type= NA chr13 32516894 32538823 32516894 32538823 - transcript287.chr13.nnic@N4BP2L2 transcript287.chr13.nnic protein_coding 32538683,32535769,32527408,32522182,32521373,32516894 32538823,32537027,32527532,32522270,32521449,32518003 Gene ID= ENSG00000244754.8 TPM= 8.6 Transcript Type= NA chr13 32516894 32538823 32516894 32538823 - transcript289.chr13.nnic@N4BP2L2 transcript289.chr13.nnic protein_coding 32538683,32527408,32522182,32521373,32516894 32538823,32527532,32522270,32521449,32518003 Gene ID= ENSG00000244754.8 TPM= 3.62 Transcript Type= NA chr13 32526857 32538795 32526857 32538795 - transcript294.chr13.nic@N4BP2L2 transcript294.chr13.nic protein_coding 32538618,32535769,32526857 32538795,32537027,32527532 Gene ID= ENSG00000244754.8 TPM= 1.81 Transcript Type= NA chr13 32526857 32538823 32526857 32538823 - transcript295.chr13.nnic@N4BP2L2 transcript295.chr13.nnic protein_coding 32538683,32535769,32526857 32538823,32537027,32527532 Gene ID= ENSG00000244754.8 TPM= 2.72 Transcript Type= NA chr13 32586427 32778019 32586427 32778019 + ENST00000315596.14@PDS5B ENST00000315596.14 protein_coding 32586427,32648754,32651804,32658239,32658434,32659154,32667764,32673216,32675844,32678835,32683878,32687134,32688456,32694223,32696854,32699730,32701323,32706934,32709946,32732101,32735172,32741080,32742591,32745977,32753332,32755842,32758087,32758534,32759628,32760575,32764489,32770121,32770654,32773189,32775017 32586593,32648880,32652007,32658325,32658531,32659280,32667844,32673356,32675959,32678929,32684023,32687285,32688569,32694304,32696902,32699869,32701438,32707039,32710106,32732224,32735330,32741148,32742727,32746100,32753536,32755956,32758219,32758653,32759690,32760720,32764594,32770560,32770761,32773324,32778019 Gene ID= ENSG00000083642.18 TPM= 4.53 Transcript Type= protein_coding chr13 32586452 32777602 32586452 32777602 + transcript299.chr13.nnic@PDS5B transcript299.chr13.nnic protein_coding 32586452,32648754,32651804,32658239,32658434,32659154,32667764,32673216,32675844,32678835,32683878,32687134,32688456,32694223,32696854,32699730,32701323,32706934,32709946,32732101,32735172,32741080,32742591,32745977,32753332,32755842,32758087,32758534,32759628,32760575,32764489,32770121,32773189,32775017 32586593,32648880,32652007,32658325,32658531,32659280,32667844,32673356,32675959,32678929,32684023,32687285,32688569,32694304,32696902,32699869,32701438,32707039,32710106,32732224,32735330,32741148,32742727,32746100,32753536,32755956,32758219,32758653,32759690,32760720,32764594,32770560,32773324,32777602 Gene ID= ENSG00000083642.18 TPM= 3.62 Transcript Type= NA chr13 33103141 33350686 33103141 33350686 - transcript304.chr13.nic@STARD13 transcript304.chr13.nic protein_coding 33350290,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103141 33350686,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710 Gene ID= ENSG00000133121.20 TPM= 6.34 Transcript Type= NA chr13 33103135 33285755 33103135 33285755 - ENST00000336934.9@STARD13 ENST00000336934.9 protein_coding 33285470,33167551,33165337,33142310,33128929,33127373,33126081,33118065,33112721,33111778,33110686,33109873,33106758,33103135 33285755,33167622,33165418,33142373,33130289,33127546,33126240,33118263,33112931,33111892,33110907,33110090,33106934,33105710 Gene ID= ENSG00000133121.20 TPM= 7.24 Transcript Type= protein_coding chr13 33818069 33966558 33818069 33966558 + ENST00000434425.5@RFC3 ENST00000434425.5 protein_coding 33818069,33821132,33823917,33825789,33829836,33830719,33831256,33835148,33966087 33818265,33821269,33823984,33825886,33830017,33830855,33831354,33835217,33966558 Gene ID= ENSG00000133119.12 TPM= 1.81 Transcript Type= protein_coding chr13 33818310 33837505 33818310 33837505 + transcript315.chr13.nnic@RFC3 transcript315.chr13.nnic protein_coding 33818310,33821132,33823917,33825789,33829836,33830719,33831256,33835148,33836104 33818532,33821269,33823984,33825886,33830017,33830855,33831354,33835217,33837505 Gene ID= ENSG00000133119.12 TPM= 1.81 Transcript Type= NA chr13 33818049 33837496 33818049 33837496 + ENST00000380071.7@RFC3 ENST00000380071.7 protein_coding 33818049,33821132,33823917,33825789,33829836,33830719,33831256,33835148,33836104 33818265,33821269,33823984,33825886,33830017,33830855,33831354,33835217,33837496 Gene ID= ENSG00000133119.12 TPM= 38.03 Transcript Type= protein_coding chr13 36168217 36297873 36168217 36297873 - transcript324.chr13.nnic@CCDC169-SOHLH2 transcript324.chr13.nnic protein_coding 36297637,36283592,36283469,36254045,36253803,36248606,36201879,36193806,36193621,36191795,36189946,36174722,36174476,36173692,36170531,36168217 36297873,36283702,36283509,36254143,36253856,36248682,36202093,36193867,36193725,36191894,36190056,36174869,36174567,36173810,36170787,36169054 Gene ID= ENSG00000250709.1 TPM= 1.81 Transcript Type= NA chr13 36303021 36346562 36303021 36346562 - transcript340.chr13.nnic@SPART transcript340.chr13.nnic protein_coding 36346314,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36303021 36346562,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632 Gene ID= ENSG00000133104.12 TPM= 4.06 Transcript Type= NA chr13 36301640 36346797 36301640 36346797 - ENST00000451493.5@SPART ENST00000451493.5 protein_coding 36346582,36335021,36331399,36329362,36326575,36314227,36312319,36312145,36301640 36346797,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632 Gene ID= ENSG00000133104.12 TPM= 26.7 Transcript Type= protein_coding chr13 36301639 36346513 36301639 36346513 - transcript342.chr13.nnic@SPART transcript342.chr13.nnic protein_coding 36346225,36335021,36331399,36329392,36326575,36314227,36312319,36312145,36301639 36346513,36335832,36331596,36329517,36326698,36314421,36312477,36312235,36304632 Gene ID= ENSG00000133104.12 TPM= 3.75 Transcript Type= NA chr13 36819224 36829104 36819224 36829104 + ENST00000255476.2@RFXAP ENST00000255476.2 protein_coding 36819224,36825428,36827643 36819957,36825535,36829104 Gene ID= ENSG00000133111.3 TPM= 4.53 Transcript Type= protein_coding chr13 36949830 36999377 36949830 36999377 - transcript353.chr13.nic@ALG5 transcript353.chr13.nic protein_coding 36999235,36995425,36993604,36989484,36985627,36971977,36965575,36952514,36949830 36999377,36995596,36993672,36989576,36985740,36972036,36965726,36952599,36950057 Gene ID= ENSG00000120697.8 TPM= 3.62 Transcript Type= NA chr13 36949848 36999304 36949848 36999304 - transcript354.chr13.nnic@ALG5 transcript354.chr13.nnic protein_coding 36999235,36995425,36994989,36993604,36985627,36971977,36965575,36952514,36949848 36999304,36995596,36995035,36993672,36985740,36972036,36965726,36952599,36950057 Gene ID= ENSG00000120697.8 TPM= 1.81 Transcript Type= NA chr13 36949848 36999377 36949848 36999377 - transcript355.chr13.nnic@ALG5 transcript355.chr13.nnic protein_coding 36999235,36995425,36994989,36993604,36989484,36985627,36971977,36952514,36949848 36999377,36995596,36995035,36993672,36989576,36985740,36972036,36952599,36950057 Gene ID= ENSG00000120697.8 TPM= 1.81 Transcript Type= NA chr13 36949830 36999367 36949830 36999367 - ENST00000239891.3@ALG5 ENST00000239891.3 protein_coding 36999235,36995425,36994989,36993604,36989484,36985627,36971977,36965575,36952514,36949830 36999367,36995596,36995035,36993672,36989576,36985740,36972036,36965726,36952599,36950057 Gene ID= ENSG00000120697.8 TPM= 71.54 Transcript Type= protein_coding chr13 37000786 37009398 37000786 37009398 + transcript387.chr13.nic@EXOSC8 transcript387.chr13.nic protein_coding 37000786,37002273,37002488,37002934,37005920,37006115,37006975,37008057,37008729,37009184 37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009398 Gene ID= ENSG00000120699.12 TPM= 7.24 Transcript Type= NA chr13 37000787 37009401 37000787 37009401 + ENST00000490537.6@EXOSC8 ENST00000490537.6 protein_coding 37000787,37002273,37002488,37002934,37005957,37006115,37006975,37008057,37008729,37009184 37000822,37002309,37002551,37004561,37006025,37006160,37007071,37008177,37008835,37009401 Gene ID= ENSG00000120699.12 TPM= 2.72 Transcript Type= retained_intron chr13 37009315 37059699 37009315 37059699 - transcript357.chr13.nnic@SUPT20H transcript357.chr13.nnic protein_coding 37059559,37054135,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009315 37059699,37054296,37051583,37048599,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809 Gene ID= ENSG00000102710.19 TPM= 2.26 Transcript Type= NA chr13 37009316 37059713 37009316 37059713 - ENST00000360252.8@SUPT20H ENST00000360252.8 protein_coding 37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009316 37059713,37051583,37048599,37047936,37047601,37045376,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809 Gene ID= ENSG00000102710.19 TPM= 5.89 Transcript Type= protein_coding chr13 37009315 37059694 37009315 37059694 - transcript365.chr13.nic@SUPT20H transcript365.chr13.nic protein_coding 37059559,37051488,37048564,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009315 37059694,37051583,37048599,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37023044,37021602,37019397,37017364,37012297,37009809 Gene ID= ENSG00000102710.19 TPM= 1.97 Transcript Type= NA chr13 37009315 37059694 37009315 37059694 - transcript372.chr13.nic@SUPT20H transcript372.chr13.nic protein_coding 37059559,37051488,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009315 37059694,37051583,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809 Gene ID= ENSG00000102710.19 TPM= 8.6 Transcript Type= NA chr13 37009315 37059694 37009315 37059694 - transcript377.chr13.nic@SUPT20H transcript377.chr13.nic protein_coding 37059559,37051488,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37025320,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009315 37059694,37051583,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37025437,37024442,37024193,37023044,37021602,37019397,37017364,37012297,37009809 Gene ID= ENSG00000102710.19 TPM= 2.87 Transcript Type= NA chr13 37009315 37059694 37009315 37059694 - transcript380.chr13.nic@SUPT20H transcript380.chr13.nic protein_coding 37059559,37051488,37047878,37047535,37045247,37044078,37040576,37040405,37033449,37031739,37031567,37029765,37028148,37026790,37026204,37024340,37024035,37022011,37021448,37019342,37017245,37012192,37009315 37059694,37051583,37047936,37047601,37045373,37044181,37040692,37040458,37033588,37031895,37031623,37029836,37028305,37026816,37026236,37024442,37024193,37022080,37021602,37019397,37017364,37012297,37009809 Gene ID= ENSG00000102710.19 TPM= 1.97 Transcript Type= NA chr13 38349810 38363000 38349810 38363000 + transcript399.chr13.nnic@UFM1 transcript399.chr13.nnic protein_coding 38349810,38349999,38354239,38358093,38359301,38360041 38349921,38350055,38354296,38358132,38359333,38363000 Gene ID= ENSG00000120686.11 TPM= 9.06 Transcript Type= NA chr13 39038311 39050109 39038311 39050109 + ENST00000470258.5@NHLRC3 ENST00000470258.5 protein_coding 39038311,39039136,39039564,39042105,39044090,39047040,39047674 39038465,39039288,39039711,39042305,39044181,39047152,39050109 Gene ID= ENSG00000188811.13 TPM= 3.02 Transcript Type= protein_coding chr13 39038318 39050109 39038318 39050109 + ENST00000379600.7@NHLRC3 ENST00000379600.7 protein_coding 39038318,39039136,39039564,39042105,39044090,39047040,39047674 39038723,39039288,39039711,39042305,39044181,39047152,39050109 Gene ID= ENSG00000188811.13 TPM= 9.35 Transcript Type= protein_coding chr13 39038318 39045281 39038318 39045281 + transcript411.chr13.nic@NHLRC3 transcript411.chr13.nic protein_coding 39038318,39039136,39039564,39042105,39044090 39038723,39039288,39039711,39042305,39045281 Gene ID= ENSG00000188811.13 TPM= 4.53 Transcript Type= NA chr13 39038391 39050109 39038391 39050109 + ENST00000379599.6@NHLRC3 ENST00000379599.6 protein_coding 39038391,39039136,39039564,39044090,39047040,39047674 39038723,39039288,39039711,39044181,39047152,39050109 Gene ID= ENSG00000188811.13 TPM= 11.17 Transcript Type= protein_coding chr13 39342882 39603181 39342882 39603181 - transcript414.chr13.nnic@LHFPL6 transcript414.chr13.nnic protein_coding 39602883,39600832,39422842,39378428,39342882 39603181,39601390,39422910,39378526,39344054 Gene ID= ENSG00000183722.7 TPM= 2.72 Transcript Type= NA chr13 39342892 39603171 39342892 39603171 - ENST00000379589.3@LHFPL6 ENST00000379589.3 protein_coding 39602883,39600832,39378428,39342892 39603171,39601390,39378526,39344054 Gene ID= ENSG00000183722.7 TPM= 112.29 Transcript Type= protein_coding chr13 39655704 39752500 39655704 39752500 + transcript418.chr13.nnic@COG6 transcript418.chr13.nnic protein_coding 39655704,39659364,39660810,39665096,39677468,39679538,39679975,39682171,39687503,39687708,39689760,39694634,39699501,39719236,39719660,39723333,39724508,39727469,39732044,39750946 39655879,39659507,39660881,39665154,39677579,39679620,39680045,39682264,39687631,39687799,39689824,39694725,39699618,39719367,39719827,39723440,39724561,39727548,39732178,39752500 Gene ID= ENSG00000133103.16 TPM= 4.98 Transcript Type= NA chr13 39655677 39752632 39655677 39752632 + ENST00000455146.7@COG6 ENST00000455146.7 protein_coding 39655677,39659364,39660810,39665096,39677468,39679538,39679975,39682171,39687503,39687708,39689760,39694634,39699501,39719236,39719660,39723333,39724508,39727469,39750946 39655879,39659507,39660881,39665154,39677579,39679620,39680045,39682264,39687631,39687799,39689824,39694725,39699618,39719367,39719827,39723440,39724561,39727548,39752632 Gene ID= ENSG00000133103.16 TPM= 33.96 Transcript Type= protein_coding chr13 40789430 40812459 40789430 40812459 + transcript429.chr13.nnic@SLC25A15 transcript429.chr13.nnic protein_coding 40789430,40793158,40799057,40805118,40807294,40808438,40809543,40811452 40789663,40793281,40799315,40805255,40807463,40808596,40810194,40812459 Gene ID= ENSG00000102743.14 TPM= 2.72 Transcript Type= NA chr13 40931243 41061755 40931243 41061755 - transcript443.chr13.nic@ELF1 transcript443.chr13.nic protein_coding 41060838,40981983,40958836,40951329,40949806,40943842,40942952,40940921,40931243 41061755,40982282,40959016,40951436,40949973,40943925,40943144,40941370,40934028 Gene ID= ENSG00000120690.15 TPM= 22.19 Transcript Type= NA chr13 40932034 41019314 40932034 41019314 - ENST00000239882.6@ELF1 ENST00000239882.6 protein_coding 41019228,40981983,40958836,40951329,40949806,40943842,40942952,40940921,40932034 41019314,40982282,40959016,40951436,40949973,40943925,40943144,40941370,40934028 Gene ID= ENSG00000120690.15 TPM= 4.07 Transcript Type= protein_coding chr13 41061805 41083644 41061805 41083644 + transcript439.chr13.nnic@WBP4 transcript439.chr13.nnic protein_coding 41061805,41062644,41065016,41065164,41068561,41071527,41072782,41076044,41080646,41082704 41062240,41062716,41065078,41065287,41068737,41071573,41072857,41076237,41080809,41083644 Gene ID= ENSG00000120688.8 TPM= 2.72 Transcript Type= NA chr13 41216369 41263577 41216369 41263577 - ENST00000379480.8@MTRF1 ENST00000379480.8 protein_coding 41263485,41260493,41254529,41252949,41252645,41240261,41233890,41226432,41223256,41216369 41263577,41260915,41254620,41253030,41252752,41240433,41234007,41226568,41223354,41217228 Gene ID= ENSG00000120662.15 TPM= 3.62 Transcript Type= protein_coding chr13 41311205 41377030 41311205 41377030 + ENST00000379406.7@NAA16 ENST00000379406.7 protein_coding 41311205,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41336650,41355144,41358304,41358810,41362031,41367439,41369090,41372203,41372732,41373637,41374742,41375405 41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41336756,41355216,41358473,41358962,41362159,41367652,41369283,41372311,41372830,41373780,41374839,41377030 Gene ID= ENSG00000172766.18 TPM= 5.43 Transcript Type= protein_coding chr13 41311249 41377030 41311249 41377030 + transcript457.chr13.nic@NAA16 transcript457.chr13.nic protein_coding 41311249,41316846,41318806,41320667,41323056,41325698,41328724,41331274,41355144,41358304,41358810,41362031,41362731,41367439,41369090,41372203,41372732,41373637,41374742,41375405 41311582,41316930,41318910,41320824,41323190,41325851,41328843,41331369,41355216,41358473,41358962,41362159,41362873,41367652,41369283,41372311,41372830,41373780,41374839,41377030 Gene ID= ENSG00000172766.18 TPM= 2.72 Transcript Type= NA chr13 41457559 41470882 41457559 41470882 + ENST00000379359.3@RGCC ENST00000379359.3 protein_coding 41457559,41458285,41466823,41468776,41470478 41457756,41458470,41466930,41468838,41470882 Gene ID= ENSG00000102760.12 TPM= 36.22 Transcript Type= protein_coding chr13 41566837 41961084 41566837 41961084 - ENST00000379310.7@VWA8 ENST00000379310.7 protein_coding 41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41783795,41777985,41761128,41732080,41729542,41727194,41721370,41719591,41703303,41701392,41699071,41692862,41691874,41691320,41690166,41689354,41685047,41675215,41670946,41614976,41611576,41605168,41590640,41587512,41575740,41570468,41566837 41961084,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41783901,41778056,41761204,41732155,41729677,41727313,41721575,41719742,41703411,41701530,41699270,41692972,41691938,41691445,41690275,41689508,41685242,41675296,41671147,41615084,41611732,41605276,41590765,41587670,41575838,41570706,41568305 Gene ID= ENSG00000102763.17 TPM= 4.53 Transcript Type= protein_coding chr13 41719337 41961120 41719337 41961120 - ENST00000281496.6@VWA8 ENST00000281496.6 protein_coding 41960853,41949936,41912038,41907586,41891420,41887197,41886781,41885920,41883387,41868346,41865902,41865736,41833371,41830529,41819218,41816698,41811225,41787437,41783795,41777985,41761128,41732080,41729542,41727194,41721370,41719337 41961120,41950013,41912168,41907696,41891587,41887361,41886830,41886028,41883491,41868477,41866036,41865813,41833531,41830642,41819386,41816775,41811340,41787543,41783901,41778056,41761204,41732155,41729677,41727313,41721575,41719742 Gene ID= ENSG00000102763.17 TPM= 10.87 Transcript Type= protein_coding chr13 42886388 42992249 42886388 42992249 - ENST00000313624.11@EPSTI1 ENST00000313624.11 protein_coding 42991978,42970612,42969094,42964066,42963255,42953948,42926336,42917541,42900310,42895009,42886388 42992249,42970670,42969177,42964139,42963338,42954021,42926429,42917624,42900383,42895108,42888502 Gene ID= ENSG00000133106.14 TPM= 16.3 Transcript Type= protein_coding chr13 43836355 43879768 43836355 43879768 - transcript489.chr13.nnic@CCDC122 transcript489.chr13.nnic protein_coding 43879422,43874842,43859672,43858781,43836355 43879768,43874927,43860070,43858897,43837429 Gene ID= ENSG00000151773.12 TPM= 2.72 Transcript Type= NA chr13 43879079 43893950 43879079 43893950 + transcript482.chr13.nnic@LACC1 transcript482.chr13.nnic protein_coding 43879079,43879916,43880952,43882185,43883771,43888757,43890114,43891449 43879743,43880119,43881547,43882363,43883936,43888982,43890274,43893950 Gene ID= ENSG00000179630.10 TPM= 3.62 Transcript Type= NA chr13 43879833 43893932 43879833 43893932 + ENST00000325686.6@LACC1 ENST00000325686.6 protein_coding 43879833,43880952,43882185,43883771,43888757,43890114,43891449 43880119,43881547,43882363,43883936,43888982,43890274,43893932 Gene ID= ENSG00000179630.10 TPM= 1.81 Transcript Type= protein_coding chr13 44373882 44397710 44373882 44397710 + ENST00000493476.1@SERP2 ENST00000493476.1 protein_coding 44373882,44379641,44390357,44397272 44374109,44379713,44390578,44397710 Gene ID= ENSG00000151778.10 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr13 44432143 44436845 44432143 44436845 - ENST00000261489.6@TSC22D1 ENST00000261489.6 protein_coding 44436504,44436044,44432143 44436845,44436095,44434883 Gene ID= ENSG00000102804.14 TPM= 103.23 Transcript Type= protein_coding chr13 44939249 44989483 44939249 44989483 - ENST00000379161.4@NUFIP1 ENST00000379161.4 protein_coding 44989025,44982072,44980722,44979890,44979190,44965844,44959381,44949722,44943442,44939249 44989483,44982154,44980820,44979952,44979266,44965936,44959574,44949838,44943674,44941322 Gene ID= ENSG00000083635.7 TPM= 8.15 Transcript Type= protein_coding chr13 44989538 45033607 44989538 45033607 + transcript513.chr13.nic@GPALPP1 transcript513.chr13.nic protein_coding 44989538,45004305,45006202,45008795,45014952,45015432,45020330,45027785,45033236 44989742,45004437,45006303,45008879,45015083,45015596,45020428,45028003,45033607 Gene ID= ENSG00000133114.17 TPM= 6.34 Transcript Type= NA chr13 45207051 45284097 45207051 45284097 + transcript518.chr13.nic@GTF2F2 transcript518.chr13.nic protein_coding 45207051,45252871,45267233,45283442 45207505,45252970,45267376,45284097 Gene ID= ENSG00000188342.11 TPM= 1.81 Transcript Type= NA chr13 45120515 45284909 45120515 45284909 + ENST00000340473.7@GTF2F2 ENST00000340473.7 protein_coding 45120515,45136733,45149770,45151687,45207424,45252871,45267233,45283442 45120721,45136806,45149788,45151831,45207505,45252970,45267376,45284909 Gene ID= ENSG00000188342.11 TPM= 24.45 Transcript Type= protein_coding chr13 45333471 45341370 45333471 45341370 - ENST00000530705.5@TPT1 ENST00000530705.5 protein_coding 45341042,45340712,45339994,45339497,45338660,45333471 45341370,45340785,45340184,45339602,45338776,45337388 Gene ID= ENSG00000133112.16 TPM= 1295.99 Transcript Type= protein_coding chr13 45336873 45341212 45336873 45341212 - ENST00000379056.5@TPT1 ENST00000379056.5 protein_coding 45341042,45339994,45339497,45338660,45336873 45341212,45340184,45339602,45338776,45337388 Gene ID= ENSG00000133112.16 TPM= 28.23 Transcript Type= protein_coding chr13 45341592 45360499 45341592 45360499 + transcript549.chr13.nic@TPT1-AS1 transcript549.chr13.nic processed_transcript 45341592,45344329,45360141 45341630,45344446,45360499 Gene ID= ENSG00000170919.15 TPM= 1.81 Transcript Type= NA chr13 45341599 45360486 45341599 45360486 + ENST00000618947.1@TPT1-AS1 ENST00000618947.1 processed_transcript 45341599,45344305,45360141 45341630,45344446,45360486 Gene ID= ENSG00000170919.15 TPM= 4.53 Transcript Type= antisense_RNA chr13 45393316 45418380 45393316 45418380 - ENST00000519676.5@SLC25A30 ENST00000519676.5 protein_coding 45418300,45411362,45408927,45405883,45404327,45402275,45401083,45398940,45397258,45393316 45418380,45411480,45409074,45405977,45404412,45402370,45401207,45399078,45397338,45396015 Gene ID= ENSG00000174032.16 TPM= 5.43 Transcript Type= protein_coding chr13 45464925 45536630 45464925 45536630 + ENST00000349995.9@COG3 ENST00000349995.9 protein_coding 45464925,45476201,45479005,45480125,45481230,45482381,45483230,45486495,45490915,45491412,45492159,45493347,45496152,45503244,45509692,45511765,45516143,45518762,45518960,45524976,45529791,45530682,45534702 45465210,45476347,45479066,45480290,45481304,45482473,45483355,45486575,45490958,45491538,45492250,45493486,45496312,45503349,45509816,45511854,45516263,45518850,45519094,45525051,45529918,45530780,45536630 Gene ID= ENSG00000136152.14 TPM= 30.79 Transcript Type= protein_coding chr13 45954465 46052746 45954465 46052746 - ENST00000242848.8@ZC3H13 ENST00000242848.8 protein_coding 46052404,46045391,46044955,46042164,46020449,46011415,46010348,46003139,45988787,45985297,45979813,45975283,45970362,45968748,45967504,45965280,45963842,45959483,45954465 46052746,46045513,46045064,46042275,46020557,46011554,46010505,46003336,45989097,45985761,45980004,45975838,45970465,45969971,45968028,45965429,45964042,45959646,45957297 Gene ID= ENSG00000123200.16 TPM= 7.24 Transcript Type= protein_coding chr13 46125921 46211826 46125921 46211826 - transcript568.chr13.nic@LCP1 transcript568.chr13.nic protein_coding 46211732,46203101,46194024,46183909,46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125921 46211826,46203230,46194105,46183972,46182225,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723 Gene ID= ENSG00000136167.13 TPM= 20.15 Transcript Type= NA chr13 46125921 46211878 46125921 46211878 - transcript571.chr13.nnic@LCP1 transcript571.chr13.nnic protein_coding 46211732,46194024,46183909,46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125921 46211878,46194105,46183972,46182225,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723 Gene ID= ENSG00000136167.13 TPM= 11.09 Transcript Type= NA chr13 46125921 46211826 46125921 46211826 - transcript573.chr13.nic@LCP1 transcript573.chr13.nic protein_coding 46211732,46203101,46183909,46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125921 46211826,46203230,46183972,46182225,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723 Gene ID= ENSG00000136167.13 TPM= 13.81 Transcript Type= NA chr13 46125921 46211878 46125921 46211878 - transcript575.chr13.nnic@LCP1 transcript575.chr13.nnic protein_coding 46211732,46183909,46182111,46159599,46158826,46158522,46156438,46154805,46152780,46150936,46148352,46146908,46144442,46143290,46142292,46134127,46130814,46125921 46211878,46183972,46182225,46159686,46158989,46158651,46156570,46154886,46152945,46151078,46148447,46147103,46144520,46143404,46142425,46134250,46130938,46127723 Gene ID= ENSG00000136167.13 TPM= 20.15 Transcript Type= NA chr13 46342000 46387500 46342000 46387500 - ENST00000429979.5@RUBCNL ENST00000429979.5 protein_coding 46387134,46377890,46371941,46368733,46368042,46363115,46362538,46361441,46359486,46356432,46350113,46349286,46345447,46344741,46342000 46387500,46378005,46372597,46368815,46368249,46363213,46362598,46361573,46359631,46356496,46350351,46349347,46345600,46344831,46343497 Gene ID= ENSG00000102445.18 TPM= 2.72 Transcript Type= protein_coding chr13 46553168 46753040 46553168 46753040 + ENST00000311191.10@LRCH1 ENST00000311191.10 protein_coding 46553168,46650201,46669030,46681741,46685905,46687852,46689133,46692536,46694893,46699336,46701121,46705068,46705268,46711791,46712525,46723221,46728847,46733921,46750540 46553703,46650345,46669156,46681846,46686041,46687979,46689196,46692641,46695017,46699403,46701207,46705157,46705304,46711844,46712597,46723330,46728984,46733998,46753040 Gene ID= ENSG00000136141.14 TPM= 8.15 Transcript Type= protein_coding chr13 46775375 46797187 46775375 46797187 - transcript592.chr13.nic@ESD transcript592.chr13.nic protein_coding 46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46775375 46797187,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623 Gene ID= ENSG00000139684.13 TPM= 8.15 Transcript Type= NA chr13 46771256 46797232 46771256 46797232 - ENST00000378720.7@ESD ENST00000378720.7 protein_coding 46797105,46793397,46791346,46787021,46784252,46782667,46781496,46779935,46777456,46771256 46797232,46793444,46791420,46787109,46784350,46782791,46781615,46780033,46777623,46771496 Gene ID= ENSG00000139684.13 TPM= 89.65 Transcript Type= protein_coding chr13 47942656 48001354 47942656 48001354 - ENST00000378654.8@SUCLA2 ENST00000378654.8 protein_coding 48001180,47996843,47988882,47988541,47973264,47968595,47954396,47954140,47949483,47948940,47942656 48001354,47997023,47988981,47988703,47973392,47968733,47954557,47954282,47949603,47949028,47943445 Gene ID= ENSG00000136143.14 TPM= 163.9 Transcript Type= protein_coding chr13 48001825 48037992 48001825 48037992 + transcript604.chr13.nnic@SUCLA2-AS1 transcript604.chr13.nnic antisense_RNA 48001825,48015171,48037606 48002600,48015248,48037992 Gene ID= ENSG00000227848.1 TPM= 1.81 Transcript Type= NA chr13 48004640 48037992 48004640 48037992 + transcript606.chr13.nnic@NUDT15 transcript606.chr13.nnic protein_coding 48004640,48015171,48037606 48005001,48015248,48037992 Gene ID= ENSG00000136159.3 TPM= 1.81 Transcript Type= NA chr13 48037567 48047222 48037567 48047222 + ENST00000258662.2@NUDT15 ENST00000258662.2 protein_coding 48037567,48040920,48045660 48037904,48041116,48047222 Gene ID= ENSG00000136159.3 TPM= 19.92 Transcript Type= protein_coding chr13 48053324 48095102 48053324 48095102 - transcript610.chr13.nic@MED4 transcript610.chr13.nic protein_coding 48094954,48090352,48086282,48083371,48081645,48079844,48077153,48053324 48095102,48090418,48086452,48083428,48081731,48079975,48077311,48053491 Gene ID= ENSG00000136146.14 TPM= 1.81 Transcript Type= NA chr13 48053327 48095102 48053327 48095102 - transcript614.chr13.nnic@MED4 transcript614.chr13.nnic protein_coding 48094954,48090352,48086282,48083371,48081645,48079844,48053327 48095102,48090418,48086452,48083428,48081731,48079975,48053491 Gene ID= ENSG00000136146.14 TPM= 1.81 Transcript Type= NA chr13 48075956 48095104 48075956 48095104 - ENST00000258648.6@MED4 ENST00000258648.6 protein_coding 48094954,48090352,48086282,48083371,48081645,48079844,48075956 48095104,48090418,48086452,48083428,48081731,48079975,48077311 Gene ID= ENSG00000136146.14 TPM= 49.8 Transcript Type= protein_coding chr13 48488959 48533233 48488959 48533233 - ENST00000344532.7@RCBTB2 ENST00000344532.7 protein_coding 48533028,48524659,48522308,48521898,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488959 48533233,48524757,48522403,48521962,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251 Gene ID= ENSG00000136161.12 TPM= 18.11 Transcript Type= protein_coding chr13 48488964 48533182 48488964 48533182 - transcript631.chr13.nnic@RCBTB2 transcript631.chr13.nnic protein_coding 48533028,48522308,48521898,48515586,48515205,48512729,48512016,48511770,48510629,48502724,48501742,48499621,48496191,48488964 48533182,48522403,48521962,48515741,48515355,48512895,48512174,48511877,48510771,48502914,48501868,48499760,48496321,48490251 Gene ID= ENSG00000136161.12 TPM= 2.72 Transcript Type= NA chr13 48975912 49209779 48975912 49209779 + ENST00000492622.6@FNDC3A ENST00000492622.6 protein_coding 48975912,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081 48976177,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209779 Gene ID= ENSG00000102531.16 TPM= 7.24 Transcript Type= protein_coding chr13 48976609 49209778 48976609 49209778 + ENST00000541916.5@FNDC3A ENST00000541916.5 protein_coding 48976609,49006152,49075289,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081 48976917,49006289,49075364,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209778 Gene ID= ENSG00000102531.16 TPM= 3.62 Transcript Type= protein_coding chr13 49110313 49209593 49110313 49209593 + ENST00000398316.7@FNDC3A ENST00000398316.7 protein_coding 49110313,49114655,49131137,49136332,49138747,49145778,49167244,49168613,49172043,49174435,49175367,49178568,49185964,49187122,49188515,49191015,49191209,49196877,49197725,49197982,49198362,49201800,49203157,49207081 49110406,49114731,49131374,49136601,49138805,49145935,49167303,49168751,49172096,49174559,49175541,49178654,49186102,49187190,49188633,49191120,49191384,49196990,49197874,49198265,49198574,49201966,49203284,49209593 Gene ID= ENSG00000102531.16 TPM= 4.53 Transcript Type= protein_coding chr13 49247947 49267785 49247947 49267785 + ENST00000466868.1@CDADC1 ENST00000466868.1 protein_coding 49247947,49248871,49255839,49259486,49267490 49248119,49248965,49255913,49259523,49267785 Gene ID= ENSG00000102543.14 TPM= 1.81 Transcript Type= processed_transcript chr13 49247925 49293485 49247925 49293485 + ENST00000251108.10@CDADC1 ENST00000251108.10 protein_coding 49247925,49248871,49255839,49259346,49267490,49274291,49278350,49280509,49286222,49291684 49248119,49248965,49255913,49259523,49268059,49274340,49278519,49280698,49286282,49293485 Gene ID= ENSG00000102543.14 TPM= 8.15 Transcript Type= protein_coding chr13 49308650 49401599 49308650 49401599 - ENST00000355854.8@CAB39L ENST00000355854.8 protein_coding 49401133,49382800,49376967,49359714,49350744,49344179,49339677,49331947,49308650 49401599,49382941,49377131,49359832,49350912,49344238,49339742,49332090,49310993 Gene ID= ENSG00000102547.18 TPM= 31.69 Transcript Type= protein_coding chr13 49309798 49444126 49309798 49444126 - ENST00000409308.5@CAB39L ENST00000409308.5 protein_coding 49443986,49434086,49433318,49382800,49376967,49359714,49350744,49344179,49339677,49331947,49309798 49444126,49434223,49433393,49382941,49377131,49359832,49350912,49344238,49339742,49332090,49310993 Gene ID= ENSG00000102547.18 TPM= 3.62 Transcript Type= protein_coding chr13 49444234 49492168 49444234 49492168 + transcript657.chr13.nic@SETDB2 transcript657.chr13.nic protein_coding 49444234,49451553,49460107,49461097,49467864,49476476,49480219,49480947,49482737,49483464,49485630,49488290,49490822,49491732 49444857,49451909,49460232,49461162,49467960,49477039,49480335,49481116,49482962,49483563,49485723,49488630,49490910,49492168 Gene ID= ENSG00000136169.16 TPM= 11.77 Transcript Type= NA chr13 49495961 49528987 49495961 49528987 + ENST00000378319.7@PHF11 ENST00000378319.7 protein_coding 49495961,49506635,49513059,49518018,49520894,49522043,49523175,49524085,49526387,49528511 49496095,49506756,49513166,49518151,49520940,49522107,49523241,49524216,49526458,49528987 Gene ID= ENSG00000136147.17 TPM= 24.45 Transcript Type= protein_coding chr13 49495604 49528986 49495604 49528986 + transcript667.chr13.nic@PHF11 transcript667.chr13.nic protein_coding 49495604,49506635,49513059,49518018,49523175,49524085,49526387,49528511 49496095,49506756,49513166,49522107,49523241,49524216,49526458,49528986 Gene ID= ENSG00000136147.17 TPM= 5.43 Transcript Type= NA chr13 49531943 49585592 49531943 49585592 - transcript684.chr13.nnic@RCBTB1 transcript684.chr13.nnic protein_coding 49585444,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540876,49531943 49585592,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006,49534262 Gene ID= ENSG00000136144.11 TPM= 7.54 Transcript Type= NA chr13 49531946 49585583 49531946 49585583 - ENST00000378302.6@RCBTB1 ENST00000378302.6 protein_coding 49585444,49580505,49567154,49566618,49559918,49555515,49552178,49551326,49549458,49544737,49541676,49540876,49531946 49585583,49580584,49567320,49566768,49560084,49555673,49552285,49551468,49549648,49544863,49541827,49541006,49534262 Gene ID= ENSG00000136144.11 TPM= 134.32 Transcript Type= protein_coding chr13 49628299 49633872 49628299 49633872 + ENST00000282026.1@ARL11 ENST00000282026.1 protein_coding 49628299,49630430 49628615,49633872 Gene ID= ENSG00000152213.3 TPM= 11.77 Transcript Type= protein_coding chr13 49660723 49691438 49660723 49691438 - ENST00000473576.6@EBPL ENST00000473576.6 protein_coding 49691254,49663057,49660723 49691438,49663195,49661208 Gene ID= ENSG00000123179.13 TPM= 36.97 Transcript Type= processed_transcript chr13 49660726 49691475 49660726 49691475 - ENST00000242827.10@EBPL ENST00000242827.10 protein_coding 49691254,49669777,49663057,49660726 49691475,49669846,49663195,49661208 Gene ID= ENSG00000123179.13 TPM= 105.79 Transcript Type= protein_coding chr13 49660723 49691463 49660723 49691463 - ENST00000378272.9@EBPL ENST00000378272.9 protein_coding 49691254,49669777,49660723 49691463,49669846,49661208 Gene ID= ENSG00000123179.13 TPM= 5.73 Transcript Type= protein_coding chr13 49699303 49792256 49699303 49792256 - transcript698.chr13.nnic@KPNA3 transcript698.chr13.nnic protein_coding 49791901,49746949,49732957,49732747,49732605,49732371,49725416,49722477,49721955,49719775,49710891,49709572,49706268,49706098,49705621,49702386,49699303 49792256,49746993,49733046,49732776,49732657,49732466,49725501,49722563,49722124,49719819,49711022,49709700,49706372,49706169,49705783,49702480,49701898 Gene ID= ENSG00000102753.9 TPM= 4.07 Transcript Type= NA chr13 49699307 49792921 49699307 49792921 - ENST00000261667.7@KPNA3 ENST00000261667.7 protein_coding 49792438,49746949,49732957,49732747,49732605,49732371,49725416,49722477,49721955,49719775,49710891,49709572,49706268,49706098,49705621,49702386,49699307 49792921,49746993,49733046,49732776,49732657,49732466,49725501,49722563,49722124,49719819,49711022,49709700,49706372,49706169,49705783,49702480,49701898 Gene ID= ENSG00000102753.9 TPM= 24.9 Transcript Type= protein_coding chr13 49912706 49936340 49912706 49936340 - ENST00000361840.7@SPRYD7 ENST00000361840.7 protein_coding 49936130,49931018,49927919,49921478,49912706 49936340,49931134,49928085,49921580,49915160 Gene ID= ENSG00000123178.14 TPM= 30.79 Transcript Type= protein_coding chr13 49997019 50014331 49997019 50014331 + ENST00000420995.6@TRIM13 ENST00000420995.6 protein_coding 49997019,49997667,50011935 49997131,49997763,50014331 Gene ID= ENSG00000204977.9 TPM= 9.06 Transcript Type= protein_coding chr13 49997032 50018451 49997032 50018451 + ENST00000378182.3@TRIM13 ENST00000378182.3 protein_coding 49997032,50011935 49997763,50018451 Gene ID= ENSG00000204977.9 TPM= 4.53 Transcript Type= protein_coding chr13 49997059 50013168 49997059 50013168 + ENST00000457662.2@TRIM13 ENST00000457662.2 protein_coding 49997059,49997667,50011935 49997216,49997763,50013168 Gene ID= ENSG00000204977.9 TPM= 4.53 Transcript Type= protein_coding chr13 50049188 50125544 50049188 50125544 - transcript712.chr13.nic@DLEU2 transcript712.chr13.nic antisense_RNA 50125302,50075559,50068097,50049188 50125544,50075653,50068163,50049662 Gene ID= ENSG00000231607.10 TPM= 2.72 Transcript Type= NA chr13 50909678 50956765 50909678 50956765 + ENST00000336617.7@RNASEH2B ENST00000336617.7 protein_coding 50909678,50927407,50929475,50930683,50934885,50943321,50945427,50947987,50949463,50953905,50956358 50910140,50927478,50929582,50930759,50934999,50943394,50945532,50948068,50949505,50953985,50956765 Gene ID= ENSG00000136104.19 TPM= 9.06 Transcript Type= protein_coding chr13 51354078 51453036 51354078 51453036 - transcript728.chr13.nic@INTS6 transcript728.chr13.nic protein_coding 51452415,51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365703,51354078 51453036,51452055,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845,51354336 Gene ID= ENSG00000102786.14 TPM= 1.81 Transcript Type= NA chr13 51362663 51453036 51362663 51453036 - transcript729.chr13.nic@INTS6 transcript729.chr13.nic protein_coding 51452415,51451978,51451025,51430294,51421112,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51362663 51453036,51452055,51451174,51430383,51421334,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845 Gene ID= ENSG00000102786.14 TPM= 9.28 Transcript Type= NA chr13 51365228 51452277 51365228 51452277 - transcript733.chr13.nic@INTS6 transcript733.chr13.nic protein_coding 51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365228 51452277,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845 Gene ID= ENSG00000102786.14 TPM= 2.94 Transcript Type= NA chr13 51365228 51453036 51365228 51453036 - transcript735.chr13.nnic@INTS6 transcript735.chr13.nnic protein_coding 51452415,51451978,51451025,51430294,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365228 51453036,51452055,51451174,51430383,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845 Gene ID= ENSG00000102786.14 TPM= 2.04 Transcript Type= NA chr13 51365227 51452998 51365227 51452998 - ENST00000311234.8@INTS6 ENST00000311234.8 protein_coding 51452415,51451978,51451025,51430294,51395300,51389319,51387386,51383589,51383329,51382029,51379462,51378239,51376048,51374654,51374208,51368939,51367805,51365227 51452998,51452055,51451174,51430383,51395483,51389444,51387540,51383741,51383461,51382123,51379572,51378454,51376174,51374796,51374439,51369310,51367898,51365845 Gene ID= ENSG00000102786.14 TPM= 25.58 Transcript Type= protein_coding chr13 51584450 51754090 51584450 51754090 + transcript746.chr13.nic@WDFY2 transcript746.chr13.nic protein_coding 51584450,51660596,51675170,51703596,51719198,51727678,51739049,51751310 51584824,51660663,51675243,51703650,51719348,51727790,51739175,51754090 Gene ID= ENSG00000139668.8 TPM= 3.62 Transcript Type= NA chr13 51767994 51804181 51767994 51804181 - transcript750.chr13.nic@DHRS12 transcript750.chr13.nic protein_coding 51804054,51799534,51791165,51790011,51777060,51773930,51771821,51769156,51767994 51804181,51799667,51791257,51790092,51777121,51774034,51771911,51769293,51768296 Gene ID= ENSG00000102796.10 TPM= 1.81 Transcript Type= NA chr13 51770776 51804181 51770776 51804181 - transcript751.chr13.nic@DHRS12 transcript751.chr13.nic protein_coding 51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51770776 51804181,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51771495 Gene ID= ENSG00000102796.10 TPM= 1.81 Transcript Type= NA chr13 51791117 51804181 51791117 51804181 - transcript757.chr13.nic@DHRS12 transcript757.chr13.nic protein_coding 51804054,51799534,51797826,51791117 51804181,51799667,51797908,51791257 Gene ID= ENSG00000102796.10 TPM= 2.72 Transcript Type= NA chr13 51767993 51804123 51767993 51804123 - ENST00000444610.6@DHRS12 ENST00000444610.6 protein_coding 51804054,51799534,51797826,51791165,51790011,51777060,51773930,51771821,51769156,51767993 51804123,51799667,51797908,51791257,51790092,51777121,51774034,51771911,51769293,51768296 Gene ID= ENSG00000102796.10 TPM= 12.68 Transcript Type= protein_coding chr13 51932673 52011494 51932673 52011494 - ENST00000242839.8@ATP7B ENST00000242839.8 protein_coding 52011287,51973935,51970492,51968444,51964872,51961837,51960148,51958311,51957516,51950272,51950007,51949662,51946284,51944109,51942386,51941081,51939051,51937476,51937276,51935593,51932673 52011494,51975168,51970749,51968607,51965033,51961913,51960322,51958544,51957607,51950399,51950161,51949796,51946478,51944291,51942554,51941224,51939193,51937679,51937393,51935695,51935029 Gene ID= ENSG00000123191.14 TPM= 2.72 Transcript Type= protein_coding chr13 52132643 52159861 52132643 52159861 - ENST00000610828.4@NEK3 ENST00000610828.4 protein_coding 52159543,52156075,52154080,52153895,52152609,52151325,52151146,52148415,52144691,52143915,52141020,52136800,52136116,52135729,52133689,52132643 52159861,52156248,52154173,52153992,52152692,52151392,52151232,52148469,52144891,52143987,52141069,52136902,52136259,52135863,52133815,52133226 Gene ID= ENSG00000136098.16 TPM= 1.81 Transcript Type= protein_coding chr13 52132641 52159608 52132641 52159608 - transcript764.chr13.nnic@NEK3 transcript764.chr13.nnic protein_coding 52159543,52154080,52153895,52152609,52151325,52151146,52148415,52144691,52143915,52141020,52136800,52136116,52135729,52133689,52132641 52159608,52154173,52153992,52152692,52151392,52151232,52148469,52144891,52143987,52141069,52136902,52136259,52135863,52133815,52133226 Gene ID= ENSG00000136098.16 TPM= 1.81 Transcript Type= NA chr13 52167712 52194452 52167712 52194452 - transcript771.chr13.nnic@MRPS31P5 transcript771.chr13.nnic transcribed_unprocessed_pseudogene 52194254,52189639,52186683,52183976,52180582,52175639,52171158,52169987,52167712 52194452,52189914,52186823,52184114,52180654,52175776,52171248,52170099,52169304 Gene ID= ENSG00000243406.6 TPM= 3.62 Transcript Type= NA chr13 52377167 52406494 52377167 52406494 - ENST00000349258.8@THSD1 ENST00000349258.8 protein_coding 52406031,52402543,52397232,52377167 52406494,52402681,52398194,52378789 Gene ID= ENSG00000136114.15 TPM= 2.72 Transcript Type= protein_coding chr13 52377187 52406128 52377187 52406128 - ENST00000258613.4@THSD1 ENST00000258613.4 protein_coding 52406031,52402543,52397232,52386028,52377187 52406128,52402681,52398194,52386186,52378789 Gene ID= ENSG00000136114.15 TPM= 6.34 Transcript Type= protein_coding chr13 52412695 52450627 52412695 52450627 - transcript781.chr13.nnic@VPS36 transcript781.chr13.nnic protein_coding 52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52417992,52417057,52416017,52412695 52450627,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52418056,52417141,52416093,52415923 Gene ID= ENSG00000136100.12 TPM= 2.26 Transcript Type= NA chr13 52412602 52450622 52412602 52450622 - ENST00000378060.8@VPS36 ENST00000378060.8 protein_coding 52450499,52442377,52439098,52436290,52434793,52433662,52427187,52426989,52425932,52423574,52417992,52417057,52416017,52412602 52450622,52442445,52439168,52436404,52434882,52433748,52427219,52427066,52426066,52423639,52418056,52417141,52416093,52415923 Gene ID= ENSG00000136100.12 TPM= 42.11 Transcript Type= protein_coding chr13 52455439 52476349 52455439 52476349 + transcript790.chr13.nic@CKAP2 transcript790.chr13.nic protein_coding 52455439,52456523,52461058,52462363,52465295,52468278,52473829,52474895 52455626,52456607,52461926,52462567,52465465,52468347,52474084,52476349 Gene ID= ENSG00000136108.14 TPM= 2.72 Transcript Type= NA chr13 52455467 52476628 52455467 52476628 + ENST00000378037.9@CKAP2 ENST00000378037.9 protein_coding 52455467,52456523,52460896,52461058,52462363,52465295,52468278,52473829,52474895 52455626,52456607,52460974,52461926,52462567,52465465,52468347,52474084,52476628 Gene ID= ENSG00000136108.14 TPM= 18.11 Transcript Type= protein_coding chr13 52617472 52643785 52617472 52643785 + transcript794.chr13.nnic@AL137058.2 transcript794.chr13.nnic processed_transcript 52617472,52621989,52627438,52629769,52632422,52637305,52642406 52617682,52622264,52627578,52629874,52632494,52637446,52643785 Gene ID= ENSG00000273784.4 TPM= 2.72 Transcript Type= NA chr13 52617472 52643784 52617472 52643784 + transcript796.chr13.nic@AL137058.2 transcript796.chr13.nic processed_transcript 52617472,52621989,52627438,52632422,52637305,52642369 52617682,52622264,52627578,52632494,52637446,52643784 Gene ID= ENSG00000273784.4 TPM= 2.72 Transcript Type= NA chr13 52617472 52643785 52617472 52643785 + transcript797.chr13.nic@AL137058.2 transcript797.chr13.nic processed_transcript 52617472,52621989,52627438,52632422,52637305,52642406 52617682,52622264,52627578,52632494,52637446,52643785 Gene ID= ENSG00000273784.4 TPM= 7.24 Transcript Type= NA chr13 52617472 52631977 52617472 52631977 + transcript798.chr13.nnic@MRPS31P4 transcript798.chr13.nnic transcribed_unprocessed_pseudogene 52617472,52621989,52627438,52629219,52629769 52617682,52622264,52627578,52629359,52631977 Gene ID= ENSG00000250299.5 TPM= 1.81 Transcript Type= NA chr13 52617472 52632053 52617472 52632053 + transcript800.chr13.nnic@MRPS31P4 transcript800.chr13.nnic transcribed_unprocessed_pseudogene 52617472,52621989,52627438,52630547 52617682,52622264,52627578,52632053 Gene ID= ENSG00000250299.5 TPM= 1.81 Transcript Type= NA chr13 52652839 52687872 52652839 52687872 + ENST00000343788.10@SUGT1 ENST00000343788.10 protein_coding 52652839,52653046,52657532,52658399,52659179,52661475,52662649,52663096,52664035,52665637,52666812,52676230,52679974,52687734 52652958,52653103,52657622,52658468,52659249,52661570,52662702,52663112,52664057,52665733,52666919,52676320,52680155,52687872 Gene ID= ENSG00000165416.14 TPM= 14.49 Transcript Type= protein_coding chr13 60396985 60573870 60396985 60573870 + transcript814.chr13.nic@TDRD3 transcript814.chr13.nic protein_coding 60396985,60439688,60444683,60460380,60467238,60483775,60485799,60494435,60509763,60510630,60528367,60535108,60567525,60573613 60397405,60439772,60444748,60460540,60467379,60483846,60485948,60494575,60509919,60510755,60529217,60535233,60567650,60573870 Gene ID= ENSG00000083544.13 TPM= 5.43 Transcript Type= NA chr13 71437966 71867192 71437966 71867192 - ENST00000613252.4@DACH1 ENST00000613252.4 protein_coding 71865922,71681795,71630556,71572840,71559820,71557024,71488997,71479169,71475706,71475141,71437966 71867192,71681910,71630717,71573012,71559955,71557158,71489148,71479316,71475849,71475209,71440692 Gene ID= ENSG00000276644.4 TPM= 14.49 Transcript Type= protein_coding chr13 72469481 72560580 72469481 72560580 . transcript823.chr13.nnic@NA transcript823.chr13.nnic NA 72469481,72550694,72556772 72469792,72550826,72560580 Gene ID= novel_gene_chr13_824 TPM= 2.72 Transcript Type= NA chr13 72708357 72727687 72708357 72727687 - ENST00000377818.3@MZT1 ENST00000377818.3 protein_coding 72727524,72718952,72708357 72727687,72719097,72710345 Gene ID= ENSG00000204899.5 TPM= 26.26 Transcript Type= protein_coding chr13 72743742 72748854 72743742 72748854 - transcript828.chr13.nnic@NA transcript828.chr13.nnic NA 72746494,72745942,72743742 72748854,72746069,72745207 Gene ID= novel_gene_chr13_829 TPM= 1.81 Transcript Type= NA chr13 72757443 72781925 72757443 72781925 - ENST00000377780.8@DIS3 ENST00000377780.8 protein_coding 72781605,72781289,72778187,72777420,72775925,72775211,72773946,72773684,72772693,72772159,72771795,72771081,72770904,72768785,72765972,72763451,72761923,72761646,72761363,72760529,72757443 72781925,72781356,72778380,72777493,72776092,72775375,72774059,72773821,72772839,72772275,72771896,72771145,72770988,72768912,72766058,72763607,72762137,72761814,72761521,72760651,72759878 Gene ID= ENSG00000083520.14 TPM= 19.02 Transcript Type= protein_coding chr13 72782059 73016461 72782059 73016461 + ENST00000326291.10@PIBF1 ENST00000326291.10 protein_coding 72782059,72783423,72792447,72795359,72797907,72821849,72827010,72827733,72835243,72854057,72893784,72908531,72917076,72931165,72965274,72973591,72998822,73015869 72782349,72783721,72792547,72795557,72798026,72821982,72827118,72827914,72835368,72854155,72893949,72908681,72917166,72931267,72965404,72973675,72998995,73016461 Gene ID= ENSG00000083535.15 TPM= 19.92 Transcript Type= protein_coding chr13 73058792 73077542 73058792 73077542 + ENST00000377687.5@KLF5 ENST00000377687.5 protein_coding 73058792,73061861,73063824,73075708 73059588,73062734,73063883,73077542 Gene ID= ENSG00000102554.13 TPM= 2.72 Transcript Type= protein_coding chr13 75284665 75482114 75284665 75482114 - ENST00000377625.6@TBC1D4 ENST00000377625.6 protein_coding 75481270,75362026,75359769,75356147,75349170,75341496,75341125,75336921,75327752,75326197,75312738,75309942,75306313,75302243,75299330,75294854,75292102,75288934,75284665 75482114,75362607,75359858,75356251,75349302,75341587,75341235,75337040,75327826,75326423,75312898,75310151,75306471,75302401,75299574,75295013,75292271,75289110,75287025 Gene ID= ENSG00000136111.12 TPM= 194.56 Transcript Type= protein_coding chr13 75526436 75549428 75526436 75549428 - ENST00000460675.5@COMMD6 ENST00000460675.5 protein_coding 75549323,75530114,75526436 75549428,75530266,75526639 Gene ID= ENSG00000188243.12 TPM= 23.25 Transcript Type= processed_transcript chr13 75526436 75537841 75526436 75537841 - ENST00000497707.5@COMMD6 ENST00000497707.5 protein_coding 75537764,75537664,75530311,75526436 75537841,75537675,75530408,75526639 Gene ID= ENSG00000188243.12 TPM= 6.04 Transcript Type= processed_transcript chr13 75526436 75537841 75526436 75537841 - ENST00000355801.4@COMMD6 ENST00000355801.4 protein_coding 75537764,75537664,75530114,75527813,75526436 75537841,75537675,75530266,75527851,75526639 Gene ID= ENSG00000188243.12 TPM= 1.51 Transcript Type= protein_coding chr13 75549493 75605942 75549493 75605942 + transcript866.chr13.nic@UCHL3 transcript866.chr13.nic protein_coding 75549493,75549976,75560753,75566695,75567227,75569460,75594915,75604769,75605729 75549670,75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605942 Gene ID= ENSG00000118939.17 TPM= 8.15 Transcript Type= NA chr13 75549760 75605938 75549760 75605938 + transcript871.chr13.nic@UCHL3 transcript871.chr13.nic protein_coding 75549760,75560753,75566695,75567227,75569460,75594915,75604769,75605729 75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605938 Gene ID= ENSG00000118939.17 TPM= 10.87 Transcript Type= NA chr13 75549791 75605933 75549791 75605933 + ENST00000377595.7@UCHL3 ENST00000377595.7 protein_coding 75549791,75549976,75560753,75566695,75567227,75569460,75594915,75604769,75605729 75549862,75549987,75560881,75566851,75567312,75569507,75594990,75604827,75605933 Gene ID= ENSG00000118939.17 TPM= 94.18 Transcript Type= protein_coding chr13 76990660 77005117 76990660 77005117 + ENST00000636183.1@CLN5 ENST00000636183.1 protein_coding 76990660,76995063,76995902,77000458 76992271,76995228,76996127,77005117 Gene ID= ENSG00000102805.14 TPM= 69.73 Transcript Type= protein_coding chr13 76992084 77002506 76992084 77002506 + ENST00000377453.8@CLN5 ENST00000377453.8 protein_coding 76992084,76995063,76995902,77000458 76992271,76995228,76996127,77002506 Gene ID= ENSG00000102805.14 TPM= 18.11 Transcript Type= protein_coding chr13 77000750 77027207 77000750 77027207 - transcript877.chr13.nic@FBXL3 transcript877.chr13.nic protein_coding 77026827,77021513,77018600,77015409,77000750 77027207,77021861,77018722,77015580,77002049 Gene ID= ENSG00000005812.10 TPM= 1.81 Transcript Type= NA chr13 77005259 77027193 77005259 77027193 - transcript884.chr13.nnic@FBXL3 transcript884.chr13.nnic protein_coding 77026827,77018600,77015409,77005259 77027193,77018722,77015580,77007788 Gene ID= ENSG00000005812.10 TPM= 15.39 Transcript Type= NA chr13 77005254 77027150 77005254 77027150 - ENST00000355619.9@FBXL3 ENST00000355619.9 protein_coding 77026827,77021513,77018600,77015409,77005254 77027150,77021861,77018722,77015580,77007788 Gene ID= ENSG00000005812.10 TPM= 69.73 Transcript Type= protein_coding chr13 77697687 77764227 77697687 77764227 + transcript887.chr13.nic@SLAIN1 transcript887.chr13.nic protein_coding 77697687,77719532,77743016,77744283,77746514,77753203,77760828,77763145 77698539,77719671,77743165,77744432,77746855,77753358,77761110,77764227 Gene ID= ENSG00000139737.21 TPM= 9.06 Transcript Type= NA chr13 77895481 77919768 77895481 77919768 - ENST00000377211.8@EDNRB ENST00000377211.8 protein_coding 77919397,77918091,77903495,77903156,77901058,77900521,77899859,77895481 77919768,77918624,77903607,77903360,77901207,77900654,77899967,77898334 Gene ID= ENSG00000136160.14 TPM= 23.09 Transcript Type= protein_coding chr13 77895489 77918810 77895489 77918810 - ENST00000334286.7@EDNRB ENST00000334286.7 protein_coding 77918091,77903495,77903156,77901058,77900521,77899859,77895489 77918810,77903607,77903360,77901207,77900654,77899967,77898334 Gene ID= ENSG00000136160.14 TPM= 51.16 Transcript Type= protein_coding chr13 78614291 78659179 78614291 78659179 - ENST00000282003.6@RNF219 ENST00000282003.6 protein_coding 78659049,78644862,78642122,78638823,78635110,78614291 78659179,78644997,78642213,78639071,78635198,78617122 Gene ID= ENSG00000152193.7 TPM= 15.39 Transcript Type= protein_coding chr13 79319855 79406237 79319855 79406237 - transcript904.chr13.nnic@RBM26 transcript904.chr13.nnic protein_coding 79405704,79378789,79377379,79371842,79370945,79368730,79366633,79366055,79365578,79359575,79358274,79355220,79354439,79344669,79344248,79342664,79341123,79337102,79334344,79322349,79319855 79406237,79378907,79377515,79371930,79371162,79368990,79366872,79366225,79365718,79359686,79358433,79355384,79354570,79344794,79344322,79342831,79341227,79337302,79334430,79322462,79320710 Gene ID= ENSG00000139746.15 TPM= 3.62 Transcript Type= NA chr13 79481474 79554096 79481474 79554096 + ENST00000620924.1@NDFIP2 ENST00000620924.1 protein_coding 79481474,79520810,79533323,79539682,79543558,79548328,79551017,79552516 79481524,79520975,79533456,79539775,79543682,79548394,79551122,79554096 Gene ID= ENSG00000102471.13 TPM= 2.72 Transcript Type= protein_coding chr13 94574051 94596257 94574051 94596257 - ENST00000261296.6@TGDS ENST00000261296.6 protein_coding 94596051,94593841,94592241,94590853,94583094,94581091,94579894,94578730,94578005,94577371,94576314,94574051 94596257,94593907,94592309,94590943,94583236,94581189,94579953,94578773,94578170,94577429,94576411,94574852 Gene ID= ENSG00000088451.10 TPM= 14.49 Transcript Type= protein_coding chr13 94601828 94629682 94601828 94629682 + transcript914.chr13.nnic@GPR180 transcript914.chr13.nnic protein_coding 94601828,94605391,94612190,94619468,94621078,94623109,94625966,94627013 94602072,94605549,94612390,94619517,94621235,94623300,94626043,94629682 Gene ID= ENSG00000152749.7 TPM= 1.81 Transcript Type= NA chr13 95019829 95301429 95019829 95301429 - ENST00000376887.8@ABCC4 ENST00000376887.8 protein_coding 95301241,95247643,95246975,95234610,95210692,95209434,95207800,95206532,95194836,95188453,95186701,95177997,95177707,95170532,95166158,95164378,95163610,95163122,95161189,95115922,95083140,95075432,95074214,95073204,95071662,95062704,95053095,95044266,95043682,95034605,95019829 95301429,95247753,95247095,95234834,95210781,95209597,95207925,95206781,95194937,95188542,95186892,95178091,95177793,95170628,95166367,95164518,95163647,95163216,95161335,95116001,95083290,95075551,95074324,95073304,95071853,95062859,95053184,95044438,95043787,95034739,95021682 Gene ID= ENSG00000125257.13 TPM= 2.72 Transcript Type= protein_coding chr13 95677139 95794989 95677139 95794989 + ENST00000602402.5@DNAJC3 ENST00000602402.5 protein_coding 95677139,95709227,95723242,95725178,95757644,95760040,95760679,95763643,95763833,95785939,95787007,95790873 95677337,95709337,95723366,95725252,95757796,95760221,95760798,95763748,95763953,95786071,95787155,95794989 Gene ID= ENSG00000102580.14 TPM= 21.73 Transcript Type= protein_coding chr13 95801584 96053421 95801584 96053421 - transcript933.chr13.nnic@UGGT2 transcript933.chr13.nnic protein_coding 96053155,96031889,96023629,96023040,96013307,95949335,95947996,95947037,95939957,95936924,95927213,95927028,95925680,95902854,95900807,95895180,95894562,95890862,95887892,95884491,95877698,95877279,95867339,95863629,95860788,95859591,95856158,95854315,95853543,95837086,95832927,95801584 96053421,96031971,96023759,96023152,96013481,95949454,95948081,95947172,95940091,95937088,95927336,95927126,95925774,95903060,95900938,95895304,95894657,95890964,95887971,95884680,95877856,95877364,95867423,95863714,95860883,95859675,95856340,95854475,95853657,95837202,95833053,95801812 Gene ID= ENSG00000102595.19 TPM= 1.81 Transcript Type= NA chr13 95801580 96053383 95801580 96053383 - ENST00000376747.7@UGGT2 ENST00000376747.7 protein_coding 96053155,96031889,96023629,96023040,96013307,95999211,95996063,95989973,95986333,95983804,95972580,95970112,95949335,95947996,95947037,95939957,95936924,95927213,95927028,95925680,95902854,95900807,95895180,95894562,95890862,95887892,95884491,95877698,95877279,95867339,95863629,95860788,95859591,95856158,95854315,95853543,95837086,95832927,95801580 96053383,96031971,96023759,96023152,96013481,95999307,95996135,95990073,95986432,95983864,95972671,95970262,95949454,95948081,95947172,95940091,95937088,95927336,95927126,95925774,95903060,95900938,95895304,95894657,95890964,95887971,95884680,95877856,95877364,95867423,95863714,95860883,95859675,95856340,95854475,95853657,95837202,95833053,95801812 Gene ID= ENSG00000102595.19 TPM= 14.49 Transcript Type= protein_coding chr13 96940156 96984124 96940156 96984124 - transcript935.chr13.nnic@TULP3P1 transcript935.chr13.nnic transcribed_processed_pseudogene 96984060,96981677,96955862,96940156 96984124,96981756,96955963,96941799 Gene ID= ENSG00000234267.3 TPM= 2.72 Transcript Type= NA chr13 97222333 97394121 97222333 97394121 + transcript939.chr13.nic@MBNL2 transcript939.chr13.nic protein_coding 97222333,97275632,97334276,97343016,97346804,97356796,97357482,97366459,97391322 97222531,97276409,97334440,97343216,97347067,97356849,97357635,97366553,97394121 Gene ID= ENSG00000139793.18 TPM= 9.01 Transcript Type= NA chr13 97222281 97394121 97222281 97394121 + transcript944.chr13.nic@MBNL2 transcript944.chr13.nic protein_coding 97222281,97275632,97334276,97343016,97346804,97356796,97357482,97391322 97222531,97276409,97334440,97343216,97347067,97356849,97357635,97394121 Gene ID= ENSG00000139793.18 TPM= 16.71 Transcript Type= NA chr13 97222281 97394121 97222281 97394121 + transcript946.chr13.nic@MBNL2 transcript946.chr13.nic protein_coding 97222281,97275632,97334276,97343016,97346804,97357482,97366459,97391322 97222531,97276409,97334440,97343216,97347067,97357635,97366553,97394121 Gene ID= ENSG00000139793.18 TPM= 45.23 Transcript Type= NA chr13 97222296 97394119 97222296 97394119 + ENST00000343600.8@MBNL2 ENST00000343600.8 protein_coding 97222296,97275632,97334276,97343016,97346804,97357482,97391322 97222531,97276409,97334440,97343216,97347067,97357635,97394119 Gene ID= ENSG00000139793.18 TPM= 127.18 Transcript Type= protein_coding chr13 97222355 97394120 97222355 97394120 + ENST00000345429.10@MBNL2 ENST00000345429.10 protein_coding 97222355,97275632,97334276,97343016,97346804,97357482,97365136,97366459,97391322 97222531,97276409,97334440,97343216,97347067,97357635,97365171,97366553,97394120 Gene ID= ENSG00000139793.18 TPM= 2.94 Transcript Type= protein_coding chr13 97222296 97394119 97222296 97394119 + ENST00000376673.7@MBNL2 ENST00000376673.7 protein_coding 97222296,97275632,97334276,97343016,97346804,97357482,97365136,97391322 97222531,97276409,97334440,97343216,97347067,97357635,97365171,97394119 Gene ID= ENSG00000139793.18 TPM= 5.84 Transcript Type= protein_coding chr13 97975650 98024295 97975650 98024295 + transcript956.chr13.nic@IPO5 transcript956.chr13.nic protein_coding 97975650,97976693,97982503,97985421,97989062,97990126,97990433,97992892,97993105,97997531,98000539,98002467,98002684,98002864,98006130,98008059,98009881,98010103,98012246,98014042,98015530,98015726,98016729,98018485,98019581,98020992,98021736 97975997,97976786,97982583,97985613,97989164,97990222,97990537,97993014,97993225,97997618,98000645,98002591,98002773,98003037,98006348,98008142,98010013,98010224,98012342,98014214,98015641,98015781,98016851,98018704,98019809,98021133,98024295 Gene ID= ENSG00000065150.18 TPM= 22.64 Transcript Type= NA chr13 97976632 98021882 97976632 98021882 + ENST00000490680.5@IPO5 ENST00000490680.5 protein_coding 97976632,97982503,97985421,97989062,97990126,97990433,97992892,97993105,97997531,98000539,98002467,98002684,98002864,98006130,98008059,98009881,98010103,98012246,98014042,98015530,98015726,98016729,98018485,98019581,98020992,98021736 97976786,97982583,97985613,97989164,97990222,97990537,97993014,97993225,97997618,98000645,98002591,98002773,98003037,98006348,98008142,98010013,98010224,98012342,98014214,98015641,98015781,98016851,98018704,98019809,98021133,98021882 Gene ID= ENSG00000065150.18 TPM= 6.34 Transcript Type= protein_coding chr13 98451347 98576260 98451347 98576260 - transcript964.chr13.nnic@STK24 transcript964.chr13.nnic protein_coding 98575995,98519243,98504915,98482265,98475250,98474821,98466376,98463691,98461774,98460372,98457168,98451347 98576260,98519473,98505053,98482321,98475358,98474978,98466561,98463836,98461897,98460440,98457304,98453209 Gene ID= ENSG00000102572.14 TPM= 10.41 Transcript Type= NA chr13 98451347 98576260 98451347 98576260 - transcript965.chr13.nic@STK24 transcript965.chr13.nic protein_coding 98575995,98519243,98482265,98475250,98474821,98466376,98463691,98461774,98460372,98457168,98451347 98576260,98519473,98482321,98475358,98474978,98466561,98463836,98461897,98460440,98457304,98453209 Gene ID= ENSG00000102572.14 TPM= 13.13 Transcript Type= NA chr13 98793490 99086706 98793490 99086706 - transcript976.chr13.nic@DOCK9 transcript976.chr13.nic protein_coding 99086223,98955435,98930168,98925837,98923302,98922051,98920954,98915329,98914328,98904632,98902972,98902288,98901778,98898179,98897488,98888632,98888360,98888158,98886532,98885708,98884971,98883813,98883042,98881892,98881558,98880547,98879898,98868231,98867928,98867425,98863370,98863019,98860405,98855898,98853408,98850047,98848592,98845924,98837494,98831649,98831348,98829643,98829307,98826830,98824398,98810169,98809352,98807661,98804999,98800288,98797389,98797115,98793490 99086706,98955551,98930257,98925919,98923371,98922146,98921088,98915503,98914395,98904706,98903112,98902491,98901900,98898261,98897610,98888711,98888547,98888223,98886624,98885831,98885092,98883899,98883131,98882007,98881627,98880672,98879969,98868377,98868011,98867536,98863548,98863132,98860522,98856031,98853522,98850113,98848639,98846060,98837609,98831786,98831530,98829756,98829522,98826887,98824504,98810291,98809465,98807807,98805209,98800478,98797489,98797253,98794748 Gene ID= ENSG00000088387.18 TPM= 4.53 Transcript Type= NA chr13 99200867 99386434 99200867 99386434 + transcript981.chr13.nic@UBAC2 transcript981.chr13.nic protein_coding 99200867,99201429,99238427,99243832,99244515,99314097,99318022,99340320,99367787,99385228 99200939,99201567,99238554,99243951,99244624,99314220,99318069,99340565,99367906,99386434 Gene ID= ENSG00000134882.15 TPM= 7.24 Transcript Type= NA chr13 99294530 99307405 99294530 99307405 - ENST00000376414.4@GPR183 ENST00000376414.4 protein_coding 99307340,99294530 99307405,99296163 Gene ID= ENSG00000169508.6 TPM= 3.62 Transcript Type= protein_coding chr13 99494366 99496829 99494366 99496829 - transcript991.chr13.nic@LINC01232 transcript991.chr13.nic processed_transcript 99496698,99496135,99494366 99496829,99496217,99495817 Gene ID= ENSG00000280734.2 TPM= 1.81 Transcript Type= NA chr13 99498852 99563463 99498852 99563463 + transcript992.chr13.nnic@TM9SF2 transcript992.chr13.nnic protein_coding 99498852,99500597,99501019,99517614,99520036,99529467,99536608,99537739,99539446,99540714,99541559,99543863,99546985,99549165,99552167,99554304,99555536,99559363,99562691 99499469,99500784,99501777,99517681,99520129,99529594,99536737,99537863,99539557,99540793,99541667,99543995,99547104,99549222,99552326,99554455,99555647,99559534,99563463 Gene ID= ENSG00000125304.8 TPM= 287.96 Transcript Type= NA chr13 99606642 99892569 99606642 99892569 + transcript999.chr13.nic@CLYBL transcript999.chr13.nic protein_coding 99606642,99772824,99858861,99864818,99866240,99870938,99891318,99892443 99606757,99773010,99859049,99864911,99866407,99871062,99891437,99892569 Gene ID= ENSG00000125246.15 TPM= 1.81 Transcript Type= NA chr13 99606642 99865234 99606642 99865234 + transcript1001.chr13.nic@CLYBL transcript1001.chr13.nic protein_coding 99606642,99772824,99858861,99862991,99864818 99606757,99773010,99859049,99863092,99865234 Gene ID= ENSG00000125246.15 TPM= 2.72 Transcript Type= NA chr13 99606696 99892564 99606696 99892564 + ENST00000339105.8@CLYBL ENST00000339105.8 protein_coding 99606696,99772824,99858861,99862991,99864818,99866240,99870938,99891318,99892443 99606757,99773010,99859049,99863092,99864911,99866407,99871062,99891437,99892564 Gene ID= ENSG00000125246.15 TPM= 16.3 Transcript Type= protein_coding chr13 100089015 100530432 100089015 100530432 + ENST00000376286.8@PCCA ENST00000376286.8 protein_coding 100089015,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100515427,100527675,100530098 100089225,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100515567,100527752,100530432 Gene ID= ENSG00000175198.15 TPM= 5.73 Transcript Type= protein_coding chr13 100089015 100530432 100089015 100530432 + ENST00000376279.7@PCCA ENST00000376279.7 protein_coding 100089015,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100527675,100530098 100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100527752,100530432 Gene ID= ENSG00000175198.15 TPM= 12.86 Transcript Type= protein_coding chr13 100089083 100530435 100089083 100530435 + ENST00000376285.5@PCCA ENST00000376285.5 protein_coding 100089083,100102883,100111841,100111993,100154979,100157287,100209332,100235842,100257595,100262729,100268689,100273196,100301460,100302924,100307192,100309833,100330561,100340157,100368472,100425633,100449252,100515427,100527675,100530098 100089225,100102960,100111888,100112061,100155092,100157340,100209463,100235878,100257673,100262831,100268783,100273346,100301603,100302998,100307260,100309908,100330671,100340259,100368574,100425731,100449305,100515567,100527752,100530435 Gene ID= ENSG00000175198.15 TPM= 172.53 Transcript Type= protein_coding chr13 100530183 100588788 100530183 100588788 - transcript1022.chr13.nnic@GGACT transcript1022.chr13.nnic protein_coding 100588741,100583825,100530183 100588788,100583997,100532601 Gene ID= ENSG00000134864.10 TPM= 17.21 Transcript Type= NA chr13 100603927 100674879 100603927 100674879 - ENST00000376234.7@TMTC4 ENST00000376234.7 protein_coding 100674744,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603927 100674879,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142 Gene ID= ENSG00000125247.15 TPM= 7.24 Transcript Type= protein_coding chr13 100603934 100674795 100603934 100674795 - ENST00000342624.9@TMTC4 ENST00000342624.9 protein_coding 100674744,100670360,100668579,100664221,100662964,100656381,100642211,100637930,100637538,100636532,100635024,100634805,100626071,100625785,100625535,100614316,100612398,100606358,100603934 100674795,100670569,100668794,100664336,100663180,100656468,100642311,100638022,100637702,100636734,100635195,100634936,100626150,100625892,100625676,100614430,100612510,100606427,100605142 Gene ID= ENSG00000125247.15 TPM= 2.72 Transcript Type= protein_coding chr13 102597003 102678461 102597003 102678461 + ENST00000376065.8@TPP2 ENST00000376065.8 protein_coding 102597003,102604793,102614101,102616396,102618722,102622877,102627012,102627848,102629482,102630096,102633950,102635587,102636224,102637082,102638239,102640270,102643222,102644557,102644909,102646294,102647207,102648907,102649408,102657056,102663648,102664795,102674283,102676296,102678227 102597203,102604921,102614196,102616500,102618846,102623040,102627166,102627924,102629609,102630195,102634098,102635702,102636392,102637239,102638315,102640376,102643376,102644673,102645009,102646390,102647344,102649151,102649486,102657207,102663744,102664925,102674490,102676415,102678461 Gene ID= ENSG00000134900.11 TPM= 7.24 Transcript Type= protein_coding chr13 102766110 102773811 102766110 102773811 - ENST00000376032.8@TEX30 ENST00000376032.8 protein_coding 102773682,102770012,102769311,102768260,102767273,102766110 102773811,102770086,102769541,102768311,102767478,102766580 Gene ID= ENSG00000151287.16 TPM= 5.43 Transcript Type= protein_coding chr13 102784281 102799007 102784281 102799007 - ENST00000376004.4@KDELC1 ENST00000376004.4 protein_coding 102798489,102796804,102793601,102793341,102791258,102790901,102789012,102787834,102786232,102784281 102799007,102797009,102793806,102793418,102791430,102791138,102789221,102787923,102786339,102784512 Gene ID= ENSG00000134901.12 TPM= 2.72 Transcript Type= protein_coding chr13 102799049 102841533 102799049 102841533 + ENST00000257336.5@BIVM ENST00000257336.5 protein_coding 102799049,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572 102799521,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841533 Gene ID= ENSG00000134897.13 TPM= 10.49 Transcript Type= protein_coding chr13 102799956 102841537 102799956 102841537 + transcript1045.chr13.nic@BIVM transcript1045.chr13.nic protein_coding 102799956,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572 102800735,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841537 Gene ID= ENSG00000134897.13 TPM= 11.39 Transcript Type= NA chr13 102799529 102841537 102799529 102841537 + transcript1043.chr13.nnic@BIVM-ERCC5 transcript1043.chr13.nnic protein_coding 102799529,102805307,102807146,102816428,102821037,102821743,102822065,102831565,102834466,102838643,102839572 102799743,102805390,102807745,102816554,102821132,102821847,102822159,102831697,102834552,102838739,102841537 Gene ID= ENSG00000270181.2 TPM= 2.34 Transcript Type= NA chr13 102846026 102876031 102846026 102876031 + transcript1053.chr13.nnic@ERCC5 transcript1053.chr13.nnic protein_coding 102846026,102852118,102853757,102854288,102856052,102858275,102861507,102862030,102865748,102866262,102866632,102868113,102872198,102873259,102875307 102846354,102852293,102853872,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876031 Gene ID= ENSG00000134899.18 TPM= 2.94 Transcript Type= NA chr13 102845924 102876031 102845924 102876031 + transcript1055.chr13.nnic@ERCC5 transcript1055.chr13.nnic protein_coding 102845924,102852118,102853757,102854288,102856052,102858275,102861507,102862085,102865667,102866262,102866632,102868113,102872198,102873259,102875307 102846354,102852293,102853872,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876031 Gene ID= ENSG00000134899.18 TPM= 2.34 Transcript Type= NA chr13 102846013 102876031 102846013 102876031 + transcript1057.chr13.nic@ERCC5 transcript1057.chr13.nic protein_coding 102846013,102852118,102853757,102856052,102858275,102861507,102862030,102865667,102866262,102866632,102868113,102872198,102873259,102875307 102846354,102852293,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876031 Gene ID= ENSG00000134899.18 TPM= 5.05 Transcript Type= NA chr13 102846047 102876031 102846047 102876031 + transcript1058.chr13.nnic@ERCC5 transcript1058.chr13.nnic protein_coding 102846047,102852118,102853757,102856052,102858275,102861507,102862085,102865667,102866262,102866632,102868113,102872198,102873259,102875307 102846354,102852293,102854374,102856112,102858418,102861714,102863103,102865911,102866381,102866845,102868257,102872398,102873343,102876031 Gene ID= ENSG00000134899.18 TPM= 2.34 Transcript Type= NA chr13 106541865 106568168 106541865 106568168 - transcript1062.chr13.nic@ARGLU1 transcript1062.chr13.nic protein_coding 106567573,106559432,106557559,106557048,106541865 106568168,106559657,106557616,106557131,106544160 Gene ID= ENSG00000134884.13 TPM= 4.98 Transcript Type= NA chr13 106541673 106568164 106541673 106568164 - ENST00000400198.7@ARGLU1 ENST00000400198.7 protein_coding 106567573,106559432,106557048,106541673 106568164,106559657,106557131,106544160 Gene ID= ENSG00000134884.13 TPM= 28.52 Transcript Type= protein_coding chr13 106543326 106568168 106543326 106568168 - transcript1068.chr13.nic@ARGLU1 transcript1068.chr13.nic protein_coding 106567573,106557048,106543326 106568168,106559657,106544160 Gene ID= ENSG00000134884.13 TPM= 56.14 Transcript Type= NA chr13 108207439 108218368 108207439 108218368 - ENST00000405925.2@LIG4 ENST00000405925.2 protein_coding 108218162,108207439 108218368,108211296 Gene ID= ENSG00000174405.13 TPM= 4.07 Transcript Type= protein_coding chr13 108207439 108215534 108207439 108215534 - ENST00000442234.5@LIG4 ENST00000442234.5 protein_coding 108215484,108214538,108207439 108215534,108214610,108211296 Gene ID= ENSG00000174405.13 TPM= 6.79 Transcript Type= protein_coding chr13 108269629 108308484 108269629 108308484 + ENST00000430559.5@TNFSF13B ENST00000430559.5 protein_coding 108269629,108270340,108303253,108303454,108306826 108270234,108270424,108303365,108303604,108308484 Gene ID= ENSG00000102524.11 TPM= 4.83 Transcript Type= protein_coding chr13 108270217 108308481 108270217 108308481 + transcript1077.chr13.nic@TNFSF13B transcript1077.chr13.nic protein_coding 108270217,108286803,108303253,108303454,108306826 108270424,108286859,108303365,108303604,108308481 Gene ID= ENSG00000102524.11 TPM= 10.26 Transcript Type= NA chr13 108269718 108308484 108269718 108308484 + ENST00000375887.8@TNFSF13B ENST00000375887.8 protein_coding 108269718,108270340,108286803,108303253,108303454,108306826 108270234,108270424,108286859,108303365,108303604,108308484 Gene ID= ENSG00000102524.11 TPM= 22.03 Transcript Type= protein_coding chr13 108915879 109127713 108915879 109127713 + transcript1078.chr13.nnic@MYO16 transcript1078.chr13.nnic protein_coding 108915879,108957688,108961539,108962424,108964761,108992376,109008897,109019711,109046916,109052300,109055046,109055390,109100785,109120370,109125112,109127282 108916033,108957799,108961656,108962495,108964902,108992448,109009049,109019911,109046991,109052475,109055126,109055595,109100887,109120466,109125358,109127713 Gene ID= ENSG00000041515.15 TPM= 2.72 Transcript Type= NA chr13 109141003 109207997 109141003 109207997 + transcript1079.chr13.nic@MYO16 transcript1079.chr13.nic protein_coding 109141003,109164901,109179542,109206609 109141376,109165059,109179633,109207997 Gene ID= ENSG00000041515.15 TPM= 4.53 Transcript Type= NA chr13 109752698 109786568 109752698 109786568 - ENST00000375856.4@IRS2 ENST00000375856.4 protein_coding 109782042,109752698 109786568,109756308 Gene ID= ENSG00000185950.8 TPM= 53.43 Transcript Type= protein_coding chr13 110148963 110307149 110148963 110307149 - ENST00000375820.8@COL4A1 ENST00000375820.8 protein_coding 110306944,110242675,110213926,110213782,110212574,110212417,110211869,110211647,110210129,110209980,110209392,110208849,110207403,110206865,110206665,110205494,110205353,110203566,110201438,110200854,110198467,110195023,110192830,110192214,110187138,110186385,110183184,110182993,110181292,110179271,110178923,110178064,110177842,110176885,110176626,110176424,110175218,110174623,110174446,110173900,110172720,110170547,110169629,110167158,110166232,110164862,110163463,110162230,110161192,110155283,110152334,110148963 110307149,110242734,110214015,110213826,110212618,110212479,110211922,110211673,110210212,110210042,110209427,110208890,110207489,110206891,110206715,110205538,110205406,110203607,110201522,110200889,110198631,110195118,110192913,110192284,110187329,110186553,110183276,110183097,110181389,110179421,110179036,110178231,110177931,110177037,110176724,110176513,110175357,110174749,110174526,110173998,110172770,110170732,110169762,110167230,110166303,110164990,110163561,110162442,110161369,110155397,110152506,110150444 Gene ID= ENSG00000187498.14 TPM= 134.93 Transcript Type= protein_coding chr13 110307267 110513027 110307267 110513027 + ENST00000360467.5@COL4A2 ENST00000360467.5 protein_coding 110307267,110307860,110308069,110357472,110424734,110424953,110428467,110429885,110430401,110430545,110432325,110434401,110436269,110438002,110438618,110439789,110445829,110446798,110449679,110450305,110457343,110458771,110462114,110462278,110465405,110466003,110467040,110469217,110472929,110478003,110480220,110482516,110484905,110485655,110489445,110489711,110491233,110492070,110493211,110495342,110501668,110503121,110503383,110503847,110504148,110506415,110507935,110511934 110307528,110307947,110308123,110357552,110424868,110424997,110428583,110429956,110430436,110430607,110432360,110434442,110436367,110438037,110438668,110439833,110445882,110446864,110449789,110450454,110457435,110458934,110462186,110462384,110465606,110466062,110467096,110469324,110473150,110478164,110480390,110482659,110485027,110485836,110489508,110489785,110491340,110492177,110493282,110495467,110501784,110503282,110503481,110503993,110504264,110506606,110508221,110513027 Gene ID= ENSG00000134871.17 TPM= 145.79 Transcript Type= protein_coding chr13 110523066 110561733 110523066 110561733 - ENST00000267328.4@RAB20 ENST00000267328.4 protein_coding 110561348,110523066 110561733,110524197 Gene ID= ENSG00000139832.4 TPM= 102.33 Transcript Type= protein_coding chr13 110615520 110639995 110615520 110639995 + transcript1131.chr13.nic@NAXD transcript1131.chr13.nic protein_coding 110615520,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378 110615647,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639995 Gene ID= ENSG00000213995.11 TPM= 133.99 Transcript Type= NA chr13 110615590 110639995 110615590 110639995 + transcript1137.chr13.nic@NAXD transcript1137.chr13.nic protein_coding 110615590,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638378 110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639995 Gene ID= ENSG00000213995.11 TPM= 20.8 Transcript Type= NA chr13 110615520 110639995 110615520 110639995 + transcript1144.chr13.nic@NAXD transcript1144.chr13.nic protein_coding 110615520,110622216,110624234,110625190,110627439,110634545,110634672,110637129,110638378 110615647,110622366,110624279,110625278,110627547,110634595,110635588,110637249,110639995 Gene ID= ENSG00000213995.11 TPM= 13.18 Transcript Type= NA chr13 110615460 110639993 110615460 110639993 + ENST00000424185.6@NAXD ENST00000424185.6 protein_coding 110615460,110627439,110634545,110634672,110635468,110637129,110638378 110615647,110627547,110634595,110634776,110635588,110637249,110639993 Gene ID= ENSG00000213995.11 TPM= 2.24 Transcript Type= protein_coding chr13 110615591 110639993 110615591 110639993 + ENST00000470164.2@NAXD ENST00000470164.2 protein_coding 110615591,110622216,110624234,110627439,110634545,110634672,110635468,110637129,110638378 110615647,110622366,110624279,110627547,110634595,110634776,110635588,110637249,110639993 Gene ID= ENSG00000213995.11 TPM= 2.24 Transcript Type= processed_transcript chr13 110615661 110639993 110615661 110639993 + ENST00000309957.2@NAXD ENST00000309957.2 protein_coding 110615661,110622216,110624234,110625190,110627439,110634545,110634672,110635468,110637129,110638242 110615774,110622366,110624279,110625278,110627547,110634595,110634776,110635588,110637249,110639993 Gene ID= ENSG00000213995.11 TPM= 5.55 Transcript Type= protein_coding chr13 110641408 110706096 110641408 110706096 - transcript1112.chr13.nic@CARS2 transcript1112.chr13.nic protein_coding 110705870,110705521,110701438,110697918,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641408 110706096,110705571,110701555,110697967,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608 Gene ID= ENSG00000134905.16 TPM= 3.8 Transcript Type= NA chr13 110663450 110706114 110663450 110706114 - transcript1151.chr13.nnic@CARS2 transcript1151.chr13.nnic protein_coding 110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663450 110706114,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110664046 Gene ID= ENSG00000134905.16 TPM= 3.62 Transcript Type= NA chr13 110641417 110706157 110641417 110706157 - ENST00000257347.8@CARS2 ENST00000257347.8 protein_coding 110705870,110705521,110701438,110687947,110687721,110683051,110676974,110667340,110663451,110651034,110647101,110645967,110644385,110642315,110641417 110706157,110705571,110701555,110688018,110687826,110683134,110677103,110667473,110663518,110651100,110647239,110646090,110644483,110642521,110641608 Gene ID= ENSG00000134905.16 TPM= 127.68 Transcript Type= protein_coding chr13 110878540 110915101 110878540 110915101 - transcript1168.chr13.nnic@ANKRD10 transcript1168.chr13.nnic protein_coding 110914725,110910618,110906033,110903476,110893028,110883698,110878540 110915101,110910770,110906124,110903539,110893263,110883793,110880112 Gene ID= ENSG00000088448.14 TPM= 1.81 Transcript Type= NA chr13 110878541 110915071 110878541 110915071 - transcript1171.chr13.nnic@ANKRD10 transcript1171.chr13.nnic protein_coding 110914725,110910618,110906033,110893028,110883111,110878541 110915071,110910770,110906124,110893263,110883793,110880112 Gene ID= ENSG00000088448.14 TPM= 2.72 Transcript Type= NA chr13 110878541 110915080 110878541 110915080 - transcript1172.chr13.nic@ANKRD10 transcript1172.chr13.nic protein_coding 110914725,110910618,110906033,110893028,110883553,110878541 110915080,110910770,110906124,110893263,110883793,110880112 Gene ID= ENSG00000088448.14 TPM= 4.53 Transcript Type= NA chr13 110878540 110914465 110878540 110914465 - transcript1175.chr13.nnic@ANKRD10 transcript1175.chr13.nnic protein_coding 110914321,110910618,110906033,110893028,110883698,110878540 110914465,110910770,110906124,110893263,110883793,110880112 Gene ID= ENSG00000088448.14 TPM= 2.72 Transcript Type= NA chr13 110878539 110915047 110878539 110915047 - transcript1177.chr13.nic@ANKRD10 transcript1177.chr13.nic protein_coding 110914725,110910618,110906033,110893028,110878539 110915047,110910770,110906124,110893263,110883793 Gene ID= ENSG00000088448.14 TPM= 1.81 Transcript Type= NA chr13 110892694 110915055 110892694 110915055 - transcript1180.chr13.nic@ANKRD10 transcript1180.chr13.nic protein_coding 110914725,110910618,110906033,110900530,110892694 110915055,110910770,110906124,110900694,110893263 Gene ID= ENSG00000088448.14 TPM= 4.53 Transcript Type= NA chr13 110879579 110894403 110879579 110894403 - transcript1185.chr13.nic@ANKRD10 transcript1185.chr13.nic protein_coding 110893028,110883698,110879579 110894403,110883793,110880112 Gene ID= ENSG00000088448.14 TPM= 5.43 Transcript Type= NA chr13 110878540 110915069 110878540 110915069 - ENST00000267339.6@ANKRD10 ENST00000267339.6 protein_coding 110914725,110910618,110906033,110893028,110883698,110878540 110915069,110910770,110906124,110893263,110883793,110880112 Gene ID= ENSG00000088448.14 TPM= 51.62 Transcript Type= protein_coding chr13 111281210 111303691 111281210 111303691 + transcript1193.chr13.nnic@ARHGEF7 transcript1193.chr13.nnic protein_coding 111281210,111286147,111288358,111300748,111301478,111302989 111283363,111286248,111288443,111300847,111301532,111303691 Gene ID= ENSG00000102606.17 TPM= 18.11 Transcript Type= NA chr13 111153738 111305731 111153738 111305731 + ENST00000375736.8@ARHGEF7 ENST00000375736.8 protein_coding 111153738,111205289,111209872,111217679,111233205,111243872,111244199,111267548,111273814,111274731,111275532,111277587,111280272,111280538,111283139,111286147,111288354,111300748,111301478,111302991 111153991,111205373,111210002,111217880,111233293,111243966,111244294,111267670,111273952,111274790,111275678,111277673,111280350,111280677,111283363,111286240,111288443,111300847,111301532,111305731 Gene ID= ENSG00000102606.17 TPM= 15.39 Transcript Type= protein_coding chr13 112485005 112588167 112485005 112588167 - ENST00000261965.7@TUBGCP3 ENST00000261965.7 protein_coding 112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112547620,112545699,112527374,112526942,112522320,112519886,112518975,112516440,112504626,112504032,112499045,112489581,112485005 112588167,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752,112545865,112527484,112527050,112522509,112520021,112519043,112516575,112504714,112504163,112499185,112489697,112486151 Gene ID= ENSG00000126216.13 TPM= 38.94 Transcript Type= protein_coding chr13 112546482 112588135 112546482 112588135 - ENST00000464139.5@TUBGCP3 ENST00000464139.5 protein_coding 112587905,112569152,112565111,112559322,112558196,112556052,112554887,112554057,112548108,112546482 112588135,112569259,112565178,112559399,112558413,112556224,112555005,112554182,112548176,112547752 Gene ID= ENSG00000126216.13 TPM= 3.62 Transcript Type= protein_coding chr13 112979331 113098549 112979331 113098549 + transcript1201.chr13.nic@MCF2L transcript1201.chr13.nic protein_coding 112979331,113014763,113024644,113045271,113060593,113064304,113064936,113066046,113070059,113074444,113074998,113075966,113077052,113078363,113078666,113081213,113082427,113083998,113084892,113085086,113086124,113087235,113087707,113088327,113088562,113089610,113094514,113096371,113096550,113096774 112979758,113014846,113024758,113045361,113060712,113064420,113065085,113066170,113070173,113074563,113075189,113076157,113077211,113078436,113078739,113081279,113082542,113084067,113084984,113085178,113086249,113087456,113087799,113088405,113088628,113089728,113094635,113096483,113096653,113098549 Gene ID= ENSG00000126217.20 TPM= 3.62 Transcript Type= NA chr13 113122818 113149529 113122818 113149529 + ENST00000375559.7@F10 ENST00000375559.7 protein_coding 113122818,113129452,113138457,113139357,113140919,113143851,113147379,113148916 113122925,113129612,113138481,113139470,113141050,113144095,113147496,113149529 Gene ID= ENSG00000126218.11 TPM= 22.64 Transcript Type= protein_coding chr13 113177611 113208715 113177611 113208715 - ENST00000375479.6@PCID2 ENST00000375479.6 protein_coding 113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611 113208715,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113177976 Gene ID= ENSG00000126226.21 TPM= 14.49 Transcript Type= protein_coding chr13 113177577 113208711 113177577 113208711 - ENST00000337344.8@PCID2 ENST00000337344.8 protein_coding 113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177577 113208711,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287 Gene ID= ENSG00000126226.21 TPM= 46.18 Transcript Type= protein_coding chr13 113177611 113208666 113177611 113208666 - ENST00000375477.5@PCID2 ENST00000375477.5 protein_coding 113208599,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113178174,113177611 113208666,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287,113178008 Gene ID= ENSG00000126226.21 TPM= 13.58 Transcript Type= protein_coding chr13 113177617 113208650 113177617 113208650 - ENST00000375457.2@PCID2 ENST00000375457.2 protein_coding 113208024,113200427,113198191,113197178,113196181,113195071,113190872,113185485,113184346,113181130,113180158,113179917,113178966,113177617 113208650,113200516,113198264,113197243,113196222,113195125,113190975,113185560,113184487,113181230,113180231,113180042,113179089,113178287 Gene ID= ENSG00000126226.21 TPM= 3.62 Transcript Type= protein_coding chr13 113208772 113265077 113208772 113265077 + ENST00000451881.5@CUL4A ENST00000451881.5 protein_coding 113208772,113209973,113218945,113227976,113229446,113233177,113233897,113235063,113236823,113239433,113242968,113244410,113244949,113245152,113245956,113253082,113254693,113254953,113260607,113263487 113208868,113210088,113219048,113228045,113229519,113233339,113233986,113235145,113236890,113239551,113243160,113244514,113245059,113245237,113246063,113253195,113254798,113255125,113260759,113265077 Gene ID= ENSG00000139842.14 TPM= 11.32 Transcript Type= protein_coding chr13 113297241 113323672 113297241 113323672 + ENST00000332556.4@LAMP1 ENST00000332556.4 protein_coding 113297241,113306485,113309643,113310709,113319469,113320345,113321404,113321557,113322282 113297495,113306606,113309862,113310867,113319656,113320470,113321470,113321727,113323672 Gene ID= ENSG00000185896.10 TPM= 334.15 Transcript Type= protein_coding chr13 113358675 113364159 113358675 113364159 - transcript1257.chr13.nic@GRTP1 transcript1257.chr13.nic protein_coding 113364020,113363762,113358675 113364159,113363910,113360284 Gene ID= ENSG00000139835.13 TPM= 4.53 Transcript Type= NA chr13 113324190 113364126 113324190 113364126 - ENST00000375431.8@GRTP1 ENST00000375431.8 protein_coding 113364020,113363762,113355323,113350849,113344863,113325919,113325661,113324190 113364126,113363910,113355481,113350973,113344959,113326091,113325846,113324577 Gene ID= ENSG00000139835.13 TPM= 24.45 Transcript Type= protein_coding chr13 113421940 113449142 113421940 113449142 - ENST00000356501.8@ADPRHL1 ENST00000356501.8 protein_coding 113448999,113444425,113433742,113428952,113425052,113424217,113421940 113449142,113444589,113433867,113429092,113425179,113424349,113422979 Gene ID= ENSG00000153531.13 TPM= 2.72 Transcript Type= protein_coding chr13 113455819 113490960 113455819 113490960 - transcript1286.chr13.nnic@DCUN1D2 transcript1286.chr13.nnic protein_coding 113490667,113483840,113480575,113474124,113461054,113459312,113455819 113490960,113484196,113480743,113474254,113461136,113459408,113458108 Gene ID= ENSG00000150401.14 TPM= 4.53 Transcript Type= NA chr13 113455819 113490691 113455819 113490691 - ENST00000375403.6@DCUN1D2 ENST00000375403.6 protein_coding 113490667,113483840,113480575,113474124,113462740,113461054,113459312,113455819 113490691,113484056,113480743,113474254,113462891,113461136,113459408,113458108 Gene ID= ENSG00000150401.14 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr13 113490826 113550228 113490826 113550228 + transcript1272.chr13.nnic@TMCO3 transcript1272.chr13.nnic protein_coding 113490826,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113548303,113549425 113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113548452,113550228 Gene ID= ENSG00000150403.17 TPM= 10.87 Transcript Type= NA chr13 113490718 113550228 113490718 113550228 + transcript1274.chr13.nic@TMCO3 transcript1274.chr13.nic protein_coding 113490718,113495502,113498342,113499958,113501752,113510238,113520616,113534045,113539357,113547300,113548303,113549425 113491273,113496025,113498521,113500149,113501880,113510424,113520733,113534240,113539507,113547379,113548452,113550228 Gene ID= ENSG00000150403.17 TPM= 5.43 Transcript Type= NA chr13 113490818 113550228 113490818 113550228 + transcript1275.chr13.nnic@TMCO3 transcript1275.chr13.nnic protein_coding 113490818,113495502,113498342,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425 113491273,113496025,113498521,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550228 Gene ID= ENSG00000150403.17 TPM= 6.34 Transcript Type= NA chr13 113490995 113550195 113490995 113550195 + ENST00000434316.6@TMCO3 ENST00000434316.6 protein_coding 113490995,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045,113539357,113547300,113548303,113549425 113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113534240,113539507,113547379,113548452,113550195 Gene ID= ENSG00000150403.17 TPM= 156.66 Transcript Type= protein_coding chr13 113491096 113535286 113491096 113535286 + ENST00000474393.5@TMCO3 ENST00000474393.5 protein_coding 113491096,113495502,113498342,113499958,113501752,113503496,113510238,113520616,113534045 113491273,113496025,113498521,113500149,113501880,113503588,113510424,113520733,113535286 Gene ID= ENSG00000150403.17 TPM= 2.72 Transcript Type= protein_coding chr13 113584693 113641468 113584693 113641468 + transcript1297.chr13.nnic@TFDP1 transcript1297.chr13.nnic protein_coding 113584693,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120 113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637884,113641468 Gene ID= ENSG00000198176.12 TPM= 14.49 Transcript Type= NA chr13 113584699 113641486 113584699 113641486 + transcript1300.chr13.nnic@TFDP1 transcript1300.chr13.nnic protein_coding 113584699,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120 113584730,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641486 Gene ID= ENSG00000198176.12 TPM= 2.72 Transcript Type= NA chr13 113584711 113641486 113584711 113641486 + transcript1301.chr13.nic@TFDP1 transcript1301.chr13.nic protein_coding 113584711,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120 113585427,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641486 Gene ID= ENSG00000198176.12 TPM= 4.53 Transcript Type= NA chr13 113584693 113641471 113584693 113641471 + transcript1303.chr13.nnic@TFDP1 transcript1303.chr13.nnic protein_coding 113584693,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113640120 113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113641471 Gene ID= ENSG00000198176.12 TPM= 4.53 Transcript Type= NA chr13 113584693 113641486 113584693 113641486 + transcript1305.chr13.nic@TFDP1 transcript1305.chr13.nic protein_coding 113584693,113585774,113610996,113623180,113633120,113633890,113634534,113635977,113636534,113637818,113640120 113584888,113585849,113611062,113623286,113633285,113634033,113634602,113636128,113636700,113637896,113641486 Gene ID= ENSG00000198176.12 TPM= 10.87 Transcript Type= NA chr13 113584733 113586180 113584733 113586180 + ENST00000464794.5@TFDP1 ENST00000464794.5 protein_coding 113584733,113585774,113585966 113584888,113585849,113586180 Gene ID= ENSG00000198176.12 TPM= 5.43 Transcript Type= processed_transcript chr13 113584741 113641470 113584741 113641470 + ENST00000375370.9@TFDP1 ENST00000375370.9 protein_coding 113584741,113585774,113610996,113623180,113631623,113633120,113633890,113634534,113635977,113636534,113637818,113640120 113584888,113585849,113611062,113623286,113631744,113633285,113634033,113634602,113636128,113636700,113637896,113641470 Gene ID= ENSG00000198176.12 TPM= 63.39 Transcript Type= protein_coding chr13 113759213 113812251 113759213 113812251 + transcript1314.chr13.nnic@TMEM255B transcript1314.chr13.nnic protein_coding 113759213,113766115,113768623,113769098,113795148,113799339,113799971,113800827,113801653,113804885,113811736 113759315,113768265,113768969,113769160,113795237,113799419,113800065,113800912,113801812,113805028,113812251 Gene ID= ENSG00000184497.12 TPM= 2.04 Transcript Type= NA chr13 113759213 113812251 113759213 113812251 + transcript1317.chr13.nnic@TMEM255B transcript1317.chr13.nnic protein_coding 113759213,113766115,113769098,113795148,113799339,113799750,113800827,113801653,113804885,113811736 113759315,113766257,113769160,113795237,113799419,113799817,113800912,113801812,113805028,113812251 Gene ID= ENSG00000184497.12 TPM= 2.04 Transcript Type= NA chr13 113759213 113811962 113759213 113811962 + transcript1319.chr13.nnic@TMEM255B transcript1319.chr13.nnic protein_coding 113759213,113766115,113769098,113795148,113799339,113799818,113801653,113802739,113804885,113811736 113759315,113766257,113769160,113795237,113799419,113800912,113801812,113803332,113805028,113811962 Gene ID= ENSG00000184497.12 TPM= 2.04 Transcript Type= NA chr13 113759213 113812251 113759213 113812251 + transcript1321.chr13.nic@TMEM255B transcript1321.chr13.nic protein_coding 113759213,113766115,113769098,113795148,113799339,113799818,113801653,113804885,113811736 113759315,113766257,113769160,113795237,113799419,113800912,113801812,113805028,113812251 Gene ID= ENSG00000184497.12 TPM= 4.75 Transcript Type= NA chr13 113759213 113812242 113759213 113812242 + transcript1326.chr13.nnic@TMEM255B transcript1326.chr13.nnic protein_coding 113759213,113766115,113769098,113795148,113799339,113799818,113801653,113811736 113759315,113766257,113769160,113795237,113799419,113800912,113801812,113812242 Gene ID= ENSG00000184497.12 TPM= 1.81 Transcript Type= NA chr13 113759240 113799660 113759240 113799660 + ENST00000488362.5@TMEM255B ENST00000488362.5 protein_coding 113759240,113766115,113769098,113795148,113799339 113759315,113766257,113769160,113795237,113799660 Gene ID= ENSG00000184497.12 TPM= 2.72 Transcript Type= protein_coding chr13 113820558 113864067 113820558 113864067 - ENST00000327773.6@GAS6 ENST00000327773.6 protein_coding 113863833,113863575,113848026,113846527,113839728,113838069,113835513,113834551,113832634,113832299,113828547,113826996,113823375,113821958,113820558 113864067,113863741,113848050,113846589,113839850,113838191,113835635,113834672,113832752,113832488,113828711,113827164,113823550,113822186,113821018 Gene ID= ENSG00000183087.14 TPM= 280.72 Transcript Type= protein_coding chr13 113977783 114132611 113977783 114132611 - ENST00000334062.7@RASA3 ENST00000334062.7 protein_coding 114132435,114073720,114052052,114041000,114029811,114027847,114027389,114024279,114021404,114018763,114018104,114017237,114016197,114015209,114013142,114011171,114009387,114007533,114000826,113999585,113996531,113992485,113981675,113977783 114132611,114073837,114052155,114041094,114029887,114027927,114027461,114024355,114021508,114018919,114018252,114017351,114016271,114015332,114013248,114011248,114009464,114007606,114000932,113999667,113996739,113992588,113981858,113979422 Gene ID= ENSG00000185989.10 TPM= 8.15 Transcript Type= protein_coding chr13 114234855 114272720 114234855 114272720 + transcript1362.chr13.nic@CDC16 transcript1362.chr13.nic protein_coding 114234855,114236645,114236799,114238990,114239350,114242121,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184 114235132,114236699,114236896,114239028,114239490,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272720 Gene ID= ENSG00000130177.14 TPM= 4.53 Transcript Type= NA chr13 114234883 114272720 114234883 114272720 + transcript1364.chr13.nnic@CDC16 transcript1364.chr13.nnic protein_coding 114234883,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184 114235132,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272720 Gene ID= ENSG00000130177.14 TPM= 11.77 Transcript Type= NA chr13 114234977 114272675 114234977 114272675 + ENST00000356221.7@CDC16 ENST00000356221.7 protein_coding 114234977,114236645,114236799,114238990,114239350,114242121,114243257,114243856,114244890,114246000,114246931,114250549,114257078,114259335,114261887,114262879,114265150,114272184 114235132,114236699,114236896,114239028,114239490,114242280,114243348,114243989,114244969,114246049,114247004,114250674,114257230,114259398,114261948,114263014,114265240,114272675 Gene ID= ENSG00000130177.14 TPM= 30.79 Transcript Type= protein_coding chr13 114281648 114305814 114281648 114305814 + transcript1371.chr13.nnic@UPF3A transcript1371.chr13.nnic protein_coding 114281648,114282021,114282837,114284094,114286302,114286519,114291489,114291634,114298840,114301731,114304789 114281846,114282127,114282943,114284368,114286400,114286629,114291544,114291792,114299000,114302025,114305814 Gene ID= ENSG00000169062.14 TPM= 2.07 Transcript Type= NA chr13 114281583 114305814 114281583 114305814 + transcript1372.chr13.nnic@UPF3A transcript1372.chr13.nnic protein_coding 114281583,114282021,114282837,114284094,114286519,114291489,114291634,114298840,114301731,114304789 114281846,114282127,114282943,114284358,114286629,114291544,114291792,114299000,114302025,114305814 Gene ID= ENSG00000169062.14 TPM= 2.98 Transcript Type= NA chr13 114281584 114305817 114281584 114305817 + ENST00000375299.7@UPF3A ENST00000375299.7 protein_coding 114281584,114282021,114282837,114286302,114286519,114291489,114291634,114298840,114301731,114304789 114281846,114282127,114282943,114286400,114286629,114291544,114291792,114299000,114302025,114305817 Gene ID= ENSG00000169062.14 TPM= 23.81 Transcript Type= protein_coding chr13 114281920 114305814 114281920 114305814 + transcript1380.chr13.nic@UPF3A transcript1380.chr13.nic protein_coding 114281920,114282837,114286302,114286519,114291489,114291634,114298840,114301731,114304789 114282127,114282943,114286400,114286629,114291544,114291792,114299000,114302025,114305814 Gene ID= ENSG00000169062.14 TPM= 5.7 Transcript Type= NA chr13 114281920 114305814 114281920 114305814 + transcript1384.chr13.nic@UPF3A transcript1384.chr13.nic protein_coding 114281920,114282837,114286519,114291489,114291634,114298840,114301731,114304789 114282127,114282943,114286629,114291544,114291792,114299000,114302025,114305814 Gene ID= ENSG00000169062.14 TPM= 14.75 Transcript Type= NA chr13 114281930 114305814 114281930 114305814 + transcript1389.chr13.nnic@UPF3A transcript1389.chr13.nnic protein_coding 114281930,114286519,114291489,114291634,114298840,114301731,114304789 114282127,114286629,114291544,114291792,114299000,114302025,114305814 Gene ID= ENSG00000169062.14 TPM= 7.51 Transcript Type= NA chr13 114281603 114282270 114281603 114282270 + ENST00000492270.1@UPF3A ENST00000492270.1 protein_coding 114281603,114282021 114281846,114282270 Gene ID= ENSG00000169062.14 TPM= 10.87 Transcript Type= protein_coding chr13 114281628 114305808 114281628 114305808 + ENST00000351487.5@UPF3A ENST00000351487.5 protein_coding 114281628,114282021,114282837,114286519,114291489,114291634,114298840,114301731,114304789 114281846,114282127,114282943,114286629,114291544,114291792,114299000,114302025,114305808 Gene ID= ENSG00000169062.14 TPM= 16.56 Transcript Type= protein_coding chr13 114314513 114327328 114314513 114327328 + ENST00000361283.2@CHAMP1 ENST00000361283.2 protein_coding 114314513,114321110,114323788 114314643,114321232,114327328 Gene ID= ENSG00000198824.5 TPM= 1.81 Transcript Type= protein_coding chr14 20286228 20305994 20286228 20305994 - ENST00000258821.7@TTC5 ENST00000258821.7 protein_coding 20305887,20301833,20300607,20299298,20298797,20296390,20295708,20295312,20291983,20286228 20305994,20301965,20300818,20299448,20298888,20296446,20295854,20295526,20292127,20289746 Gene ID= ENSG00000136319.11 TPM= 23.54 Transcript Type= protein_coding chr14 20311370 20333288 20311370 20333288 - ENST00000358932.8@CCNB1IP1 ENST00000358932.8 protein_coding 20333254,20329174,20326716,20325539,20316227,20313468,20311370 20333288,20329373,20326793,20325653,20316560,20313801,20311752 Gene ID= ENSG00000100814.17 TPM= 4.53 Transcript Type= protein_coding chr14 20343582 20357905 20343582 20357905 + ENST00000429687.7@PARP2 ENST00000429687.7 protein_coding 20343582,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638 20343687,20345087,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357905 Gene ID= ENSG00000129484.13 TPM= 5.43 Transcript Type= protein_coding chr14 20343615 20357904 20343615 20357904 + ENST00000250416.9@PARP2 ENST00000250416.9 protein_coding 20343615,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396,20357638 20343687,20345126,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357520,20357904 Gene ID= ENSG00000129484.13 TPM= 12.68 Transcript Type= protein_coding chr14 20343614 20357903 20343614 20357903 + transcript21.chr14.nic@PARP2 transcript21.chr14.nic protein_coding 20343614,20344932,20345394,20346863,20350526,20351047,20352245,20354085,20354809,20355752,20355897,20356307,20356590,20357051,20357396 20343687,20345087,20345464,20346913,20350622,20351122,20352347,20354247,20354947,20355815,20356031,20356434,20356689,20357149,20357903 Gene ID= ENSG00000129484.13 TPM= 1.81 Transcript Type= NA chr14 20447058 20454869 20447058 20454869 - transcript26.chr14.nic@OSGEP transcript26.chr14.nic protein_coding 20454569,20452329,20451974,20449171,20448902,20448733,20448106,20447904,20447615,20447422,20447058 20454869,20452448,20452149,20449266,20449013,20448811,20448171,20447994,20447690,20447520,20447279 Gene ID= ENSG00000092094.10 TPM= 1.81 Transcript Type= NA chr14 20446668 20455105 20446668 20455105 - ENST00000206542.8@OSGEP ENST00000206542.8 protein_coding 20454569,20452329,20451974,20449171,20448964,20448733,20448106,20447904,20447615,20447422,20446668 20455105,20452448,20452149,20449266,20449013,20448811,20448171,20447994,20447690,20447520,20447279 Gene ID= ENSG00000092094.10 TPM= 20.83 Transcript Type= protein_coding chr14 20455191 20457772 20455191 20457772 + ENST00000555414.5@APEX1 ENST00000555414.5 protein_coding 20455191,20455578,20455914,20456668,20456991 20455338,20455703,20456101,20456860,20457772 Gene ID= ENSG00000100823.11 TPM= 17.21 Transcript Type= protein_coding chr14 20455195 20457767 20455195 20457767 + ENST00000216714.7@APEX1 ENST00000216714.7 protein_coding 20455195,20455578,20455914,20456668,20456991 20455394,20455703,20456101,20456860,20457767 Gene ID= ENSG00000100823.11 TPM= 95.99 Transcript Type= protein_coding chr14 20455226 20457767 20455226 20457767 + ENST00000398030.8@APEX1 ENST00000398030.8 protein_coding 20455226,20455578,20455914,20456668,20456991 20455328,20455703,20456101,20456860,20457767 Gene ID= ENSG00000100823.11 TPM= 9.06 Transcript Type= protein_coding chr14 20455240 20457738 20455240 20457738 + ENST00000557159.5@APEX1 ENST00000557159.5 protein_coding 20455240,20456668,20456991 20456101,20456860,20457738 Gene ID= ENSG00000100823.11 TPM= 7.24 Transcript Type= retained_intron chr14 20457719 20461612 20457719 20461612 - ENST00000250489.8@TMEM55B ENST00000250489.8 protein_coding 20461184,20460655,20460192,20459628,20459388,20459206,20457719 20461612,20460845,20460298,20459733,20459440,20459296,20458702 Gene ID= ENSG00000165782.10 TPM= 37.13 Transcript Type= protein_coding chr14 20457858 20461465 20457858 20461465 - ENST00000398020.6@TMEM55B ENST00000398020.6 protein_coding 20461163,20460655,20460192,20459628,20459388,20459206,20457858 20461465,20460845,20460298,20459733,20459440,20459296,20458702 Gene ID= ENSG00000165782.10 TPM= 14.49 Transcript Type= protein_coding chr14 20469379 20477094 20469379 20477094 + ENST00000361505.9@PNP ENST00000361505.9 protein_coding 20469379,20472308,20474472,20474773,20475062,20476384 20469535,20472477,20474575,20474948,20475252,20477094 Gene ID= ENSG00000198805.11 TPM= 9.06 Transcript Type= protein_coding chr14 20684100 20701215 20684100 20701215 + ENST00000555835.2@RNASE4 ENST00000555835.2 protein_coding 20684100,20699355 20684758,20701215 Gene ID= ENSG00000258818.3 TPM= 10.87 Transcript Type= protein_coding chr14 20781051 20782467 20781051 20782467 + ENST00000304677.2@RNASE6 ENST00000304677.2 protein_coding 20781051,20781695 20781338,20782467 Gene ID= ENSG00000169413.2 TPM= 9.06 Transcript Type= protein_coding chr14 20801228 20803278 20801228 20803278 - ENST00000397967.4@RNASE1 ENST00000397967.4 protein_coding 20802797,20801228 20803278,20802093 Gene ID= ENSG00000129538.13 TPM= 564.15 Transcript Type= protein_coding chr14 20801346 20802855 20801346 20802855 - ENST00000340900.3@RNASE1 ENST00000340900.3 protein_coding 20802797,20802249,20801346 20802855,20802319,20802093 Gene ID= ENSG00000129538.13 TPM= 133.12 Transcript Type= protein_coding chr14 20955452 20956436 20955452 20956436 + ENST00000304625.2@RNASE2 ENST00000304625.2 protein_coding 20955452,20955767 20955536,20956436 Gene ID= ENSG00000169385.2 TPM= 3.62 Transcript Type= protein_coding chr14 20989770 20997035 20989770 20997035 + ENST00000339374.10@METTL17 ENST00000339374.10 protein_coding 20989770,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997035 Gene ID= ENSG00000165792.17 TPM= 54.63 Transcript Type= protein_coding chr14 20989991 20997033 20989991 20997033 + transcript61.chr14.nnic@METTL17 transcript61.chr14.nnic protein_coding 20989991,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996770 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997033 Gene ID= ENSG00000165792.17 TPM= 2.72 Transcript Type= NA chr14 20989937 20997034 20989937 20997034 + transcript65.chr14.nic@METTL17 transcript65.chr14.nic protein_coding 20989937,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995901,20996209,20996527,20996785 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20995233,20995951,20996292,20996711,20997034 Gene ID= ENSG00000165792.17 TPM= 3.92 Transcript Type= NA chr14 20989937 20997034 20989937 20997034 + transcript67.chr14.nic@METTL17 transcript67.chr14.nic protein_coding 20989937,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995901,20996209,20996527,20996785 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20995233,20995951,20996292,20996711,20997034 Gene ID= ENSG00000165792.17 TPM= 3.02 Transcript Type= NA chr14 20989987 20997030 20989987 20997030 + ENST00000556670.6@METTL17 ENST00000556670.6 protein_coding 20989987,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996812 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997030 Gene ID= ENSG00000165792.17 TPM= 6.34 Transcript Type= protein_coding chr14 20989994 20997010 20989994 20997010 + ENST00000555533.6@METTL17 ENST00000555533.6 protein_coding 20989994,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997010 Gene ID= ENSG00000165792.17 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr14 20990003 20997016 20990003 20997016 + ENST00000557550.6@METTL17 ENST00000557550.6 protein_coding 20990003,20990230,20990464,20992092,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527,20996785 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20996711,20997016 Gene ID= ENSG00000165792.17 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr14 20989980 20997009 20989980 20997009 + ENST00000382985.8@METTL17 ENST00000382985.8 protein_coding 20989980,20990230,20990464,20992124,20992541,20993118,20993969,20994543,20994794,20995165,20995901,20996209,20996527 20990077,20990383,20990598,20992205,20992622,20993191,20994063,20994613,20994901,20995233,20995951,20996292,20997009 Gene ID= ENSG00000165792.17 TPM= 4.53 Transcript Type= protein_coding chr14 21016755 21025236 21016755 21025236 - transcript125.chr14.nic@NDRG2 transcript125.chr14.nic protein_coding 21025029,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016755 21025236,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 238.29 Transcript Type= NA chr14 21016772 21025094 21016772 21025094 - ENST00000397853.7@NDRG2 ENST00000397853.7 protein_coding 21025029,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772 21025094,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 353.73 Transcript Type= protein_coding chr14 21016773 21025105 21016773 21025105 - ENST00000554143.5@NDRG2 ENST00000554143.5 protein_coding 21025029,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773 21025105,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 113.38 Transcript Type= protein_coding chr14 21016773 21025105 21016773 21025105 - ENST00000397851.6@NDRG2 ENST00000397851.6 protein_coding 21025029,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773 21025105,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 183.04 Transcript Type= protein_coding chr14 21016764 21025776 21016764 21025776 - ENST00000397858.5@NDRG2 ENST00000397858.5 protein_coding 21025677,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016764 21025776,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 82.69 Transcript Type= protein_coding chr14 21016763 21025776 21016763 21025776 - ENST00000298687.9@NDRG2 ENST00000298687.9 protein_coding 21025677,21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016763 21025776,21024096,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 71.37 Transcript Type= protein_coding chr14 21016772 21025039 21016772 21025039 - ENST00000553503.5@NDRG2 ENST00000553503.5 protein_coding 21024849,21024030,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772 21025039,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 17.17 Transcript Type= protein_coding chr14 21016773 21024964 21016773 21024964 - ENST00000556147.5@NDRG2 ENST00000556147.5 protein_coding 21024030,21023241,21022864,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016773 21024964,21023321,21022905,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 9.46 Transcript Type= protein_coding chr14 21016772 21025026 21016772 21025026 - ENST00000555158.5@NDRG2 ENST00000555158.5 protein_coding 21024826,21023986,21023241,21022392,21022062,21021817,21020784,21020496,21019920,21019639,21019116,21018763,21018457,21018204,21017987,21016772 21025026,21024096,21023321,21022497,21022182,21021879,21020844,21020582,21019976,21019742,21019160,21018814,21018504,21018239,21018038,21017762 Gene ID= ENSG00000165795.23 TPM= 4.72 Transcript Type= protein_coding chr14 21070053 21090245 21070053 21090245 + transcript190.chr14.nic@ARHGEF40 transcript190.chr14.nic protein_coding 21070053,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087968,21088830,21089014 21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21088098,21088876,21090245 Gene ID= ENSG00000165801.9 TPM= 28.98 Transcript Type= NA chr14 21070260 21089544 21070260 21089544 + transcript191.chr14.nic@ARHGEF40 transcript191.chr14.nic protein_coding 21070260,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087968,21088830,21089014 21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087463,21088098,21088876,21089544 Gene ID= ENSG00000165801.9 TPM= 6.57 Transcript Type= NA chr14 21070270 21090240 21070270 21090240 + ENST00000298694.8@ARHGEF40 ENST00000298694.8 protein_coding 21070270,21073045,21073932,21075332,21075645,21076360,21076563,21076774,21078177,21078373,21078884,21080660,21080873,21081509,21082244,21082831,21083835,21084753,21085689,21087001,21087320,21087968,21088830,21089014 21070399,21073242,21075180,21075499,21075765,21076456,21076643,21076890,21078272,21078488,21079010,21080782,21081016,21082119,21082478,21082917,21084050,21084923,21085866,21087105,21087463,21088098,21088876,21090240 Gene ID= ENSG00000165801.9 TPM= 185.99 Transcript Type= protein_coding chr14 21090077 21098611 21090077 21098611 - transcript230.chr14.nic@ZNF219 transcript230.chr14.nic protein_coding 21098312,21093586,21091865,21091411,21090077 21098611,21093674,21093304,21091542,21091140 Gene ID= ENSG00000165804.15 TPM= 7.83 Transcript Type= NA chr14 21090046 21098640 21090046 21098640 - ENST00000360947.7@ZNF219 ENST00000360947.7 protein_coding 21098312,21093586,21091865,21091411,21090046 21098640,21093674,21093290,21091542,21091140 Gene ID= ENSG00000165804.15 TPM= 81.54 Transcript Type= protein_coding chr14 21090082 21104722 21090082 21104722 - ENST00000451119.6@ZNF219 ENST00000451119.6 protein_coding 21104511,21093586,21091865,21091411,21090082 21104722,21093674,21093290,21091542,21091140 Gene ID= ENSG00000165804.15 TPM= 16.35 Transcript Type= protein_coding chr14 21098929 21103723 21098929 21103723 + transcript223.chr14.nnic@TMEM253 transcript223.chr14.nnic protein_coding 21098929,21101865,21102064,21102405,21102633,21103139 21099198,21101975,21102120,21102515,21102779,21103723 Gene ID= ENSG00000232070.8 TPM= 2.72 Transcript Type= NA chr14 21209143 21269429 21209143 21269429 - transcript247.chr14.nic@HNRNPC transcript247.chr14.nic protein_coding 21269298,21262601,21233953,21230997,21230319,21212960,21211810,21211406,21209143 21269429,21263829,21234229,21231072,21230366,21213117,21211923,21211566,21211306 Gene ID= ENSG00000092199.17 TPM= 16.06 Transcript Type= NA chr14 21209143 21269445 21209143 21269445 - transcript254.chr14.nic@HNRNPC transcript254.chr14.nic protein_coding 21269298,21233953,21230997,21230319,21212960,21211810,21211406,21209143 21269445,21234229,21231072,21230366,21213117,21211923,21211566,21211306 Gene ID= ENSG00000092199.17 TPM= 33.94 Transcript Type= NA chr14 21210534 21269425 21210534 21269425 - ENST00000554969.5@HNRNPC ENST00000554969.5 protein_coding 21269298,21263667,21263311,21233953,21230997,21230319,21212960,21211810,21211406,21210534 21269425,21263829,21263336,21234229,21231072,21230366,21213117,21211923,21211566,21211306 Gene ID= ENSG00000092199.17 TPM= 3.6 Transcript Type= protein_coding chr14 21210582 21269403 21210582 21269403 - ENST00000553753.5@HNRNPC ENST00000553753.5 protein_coding 21269298,21263311,21233953,21230997,21230319,21212960,21211810,21210582 21269403,21263336,21234229,21231072,21230366,21213117,21211923,21211566 Gene ID= ENSG00000092199.17 TPM= 3.85 Transcript Type= protein_coding chr14 21210556 21234245 21210556 21234245 - ENST00000449098.5@HNRNPC ENST00000449098.5 protein_coding 21233953,21230997,21230319,21212960,21211810,21211406,21211238,21210556 21234245,21231072,21230366,21213117,21211923,21211566,21211306,21211235 Gene ID= ENSG00000092199.17 TPM= 2.26 Transcript Type= protein_coding chr14 21210937 21269442 21210937 21269442 - ENST00000553300.5@HNRNPC ENST00000553300.5 protein_coding 21269298,21263311,21233953,21230997,21230319,21212960,21211810,21211406,21210937 21269442,21263336,21234229,21231072,21230366,21213117,21211923,21211566,21211306 Gene ID= ENSG00000092199.17 TPM= 132.77 Transcript Type= protein_coding chr14 21210937 21269425 21210937 21269425 - ENST00000557201.5@HNRNPC ENST00000557201.5 protein_coding 21269298,21233953,21230958,21230319,21212960,21211810,21211406,21210937 21269425,21234229,21231072,21230366,21213117,21211923,21211566,21211306 Gene ID= ENSG00000092199.17 TPM= 9.48 Transcript Type= protein_coding chr14 21351479 21384018 21351479 21384018 - transcript257.chr14.nic@SUPT16H transcript257.chr14.nic protein_coding 21383862,21373338,21372469,21371874,21370336,21369750,21369204,21368269,21366439,21365070,21364827,21363438,21363233,21363034,21362794,21362197,21361078,21360846,21360415,21359484,21358315,21357927,21357197,21354411,21353703,21353488,21351479 21384018,21373430,21372717,21372044,21370488,21369896,21369355,21368441,21366529,21365143,21364939,21363503,21363328,21363149,21362947,21362324,21361213,21360972,21360533,21359609,21358427,21358002,21357366,21354540,21353832,21353565,21352818 Gene ID= ENSG00000092201.9 TPM= 4.53 Transcript Type= NA chr14 21351479 21384038 21351479 21384038 - transcript260.chr14.nic@SUPT16H transcript260.chr14.nic protein_coding 21383862,21373338,21371874,21370336,21369750,21369204,21368269,21366439,21365070,21364827,21363438,21363233,21363034,21362794,21362197,21361078,21360846,21360415,21359484,21357927,21357197,21354411,21353703,21353488,21351479 21384038,21373430,21372044,21370488,21369896,21369355,21368441,21366529,21365143,21364939,21363503,21363328,21363149,21362947,21362324,21361213,21360972,21360533,21359609,21358427,21357366,21354540,21353832,21353565,21352818 Gene ID= ENSG00000092201.9 TPM= 4.53 Transcript Type= NA chr14 21459021 21476985 21459021 21476985 - transcript263.chr14.nnic@RAB2B transcript263.chr14.nnic protein_coding 21476827,21476528,21474867,21468670,21468357,21463656,21462350,21460978,21459021 21476985,21476599,21474934,21468752,21468449,21463767,21462418,21461303,21460345 Gene ID= ENSG00000129472.13 TPM= 3.62 Transcript Type= NA chr14 21459021 21476985 21459021 21476985 - transcript264.chr14.nnic@RAB2B transcript264.chr14.nnic protein_coding 21476827,21476528,21474867,21468670,21468357,21463656,21462350,21460889,21459021 21476985,21476599,21474934,21468752,21468449,21463767,21462418,21461303,21460347 Gene ID= ENSG00000129472.13 TPM= 2.72 Transcript Type= NA chr14 21459021 21476664 21459021 21476664 - transcript268.chr14.nnic@RAB2B transcript268.chr14.nnic protein_coding 21476528,21474867,21468670,21468357,21463656,21462350,21460978,21459021 21476664,21474934,21468752,21468449,21463767,21462418,21461303,21460345 Gene ID= ENSG00000129472.13 TPM= 1.81 Transcript Type= NA chr14 21459020 21476973 21459020 21476973 - ENST00000397762.5@RAB2B ENST00000397762.5 protein_coding 21476827,21476528,21474867,21468670,21468357,21463656,21462350,21459020 21476973,21476599,21474934,21468752,21468449,21463767,21462418,21461303 Gene ID= ENSG00000129472.13 TPM= 5.43 Transcript Type= protein_coding chr14 21477182 21499169 21477182 21499169 + transcript280.chr14.nic@TOX4 transcript280.chr14.nic protein_coding 21477182,21477496,21487451,21489173,21492296,21492508,21495229,21496546 21477284,21477564,21488850,21489403,21492376,21493257,21495392,21499169 Gene ID= ENSG00000092203.13 TPM= 27.17 Transcript Type= NA chr14 21477182 21496227 21477182 21496227 + ENST00000613005.4@TOX4 ENST00000613005.4 protein_coding 21477182,21477496,21487451,21489173,21492296,21492508,21495229 21477284,21477564,21488850,21489403,21492376,21493257,21496227 Gene ID= ENSG00000092203.13 TPM= 2.72 Transcript Type= retained_intron chr14 21498128 21511377 21498128 21511377 - transcript278.chr14.nic@METTL3 transcript278.chr14.nic protein_coding 21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499025,21498128 21511377,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21498369 Gene ID= ENSG00000165819.11 TPM= 9.06 Transcript Type= NA chr14 21498128 21511377 21498128 21511377 - transcript281.chr14.nic@METTL3 transcript281.chr14.nic protein_coding 21511124,21503664,21503173,21500913,21500495,21499764,21499025,21498128 21511377,21503881,21503577,21501903,21500682,21499802,21499600,21498369 Gene ID= ENSG00000165819.11 TPM= 1.81 Transcript Type= NA chr14 21498138 21511375 21498138 21511375 - ENST00000298717.8@METTL3 ENST00000298717.8 protein_coding 21511124,21503664,21503173,21501728,21500913,21500495,21499764,21499492,21499306,21499025,21498138 21511375,21503881,21503577,21501903,21501129,21500682,21499802,21499600,21499371,21499137,21498369 Gene ID= ENSG00000165819.11 TPM= 47.99 Transcript Type= protein_coding chr14 22564905 22589269 22564905 22589269 - ENST00000250498.8@DAD1 ENST00000250498.8 protein_coding 22588947,22575059,22564905 22589269,22575233,22565137 Gene ID= ENSG00000129562.10 TPM= 237.25 Transcript Type= protein_coding chr14 22564908 22589157 22564908 22589157 - ENST00000538631.1@DAD1 ENST00000538631.1 protein_coding 22588947,22564908 22589157,22565137 Gene ID= ENSG00000129562.10 TPM= 3.62 Transcript Type= protein_coding chr14 22598237 22613215 22598237 22613215 + ENST00000428304.6@ABHD4 ENST00000428304.6 protein_coding 22598237,22601667,22603390,22603925,22606422,22609724,22610859 22598329,22601755,22603762,22604079,22606533,22609910,22613215 Gene ID= ENSG00000100439.10 TPM= 101.42 Transcript Type= protein_coding chr14 22766667 22773386 22766667 22773386 + transcript310.chr14.nic@OXA1L transcript310.chr14.nic protein_coding 22766667,22767248,22767958,22769791,22770193,22770805,22771018,22771268,22771434 22766764,22767409,22768171,22769934,22770625,22770909,22771180,22771348,22773386 Gene ID= ENSG00000155463.12 TPM= 5.73 Transcript Type= NA chr14 22766703 22771754 22766703 22771754 + ENST00000495424.5@OXA1L ENST00000495424.5 protein_coding 22766703,22767248,22767958,22769797,22770193,22770805,22771018,22771268,22771434 22766764,22767409,22768171,22769934,22770625,22770909,22771180,22771348,22771754 Gene ID= ENSG00000155463.12 TPM= 1.81 Transcript Type= retained_intron chr14 22773225 22815883 22773225 22815883 - transcript311.chr14.nnic@SLC7A7 transcript311.chr14.nnic protein_coding 22815320,22812900,22778793,22776195,22775833,22775444,22774354,22773933,22773225 22815883,22813440,22778937,22776318,22775936,22775540,22774503,22774116,22773716 Gene ID= ENSG00000155465.18 TPM= 2.11 Transcript Type= NA chr14 22773225 22815803 22773225 22815803 - ENST00000397532.7@SLC7A7 ENST00000397532.7 protein_coding 22815320,22812900,22779926,22778793,22776195,22775833,22775444,22774354,22773933,22773225 22815803,22813440,22780051,22778937,22776318,22775936,22775540,22774503,22774116,22773716 Gene ID= ENSG00000155465.18 TPM= 8.45 Transcript Type= protein_coding chr14 22829883 22835037 22829883 22835037 + ENST00000355151.9@MRPL52 ENST00000355151.9 protein_coding 22829883,22830050,22830187,22833418,22834172 22829940,22830110,22830254,22833482,22835037 Gene ID= ENSG00000172590.18 TPM= 61.58 Transcript Type= protein_coding chr14 22829913 22834347 22829913 22834347 + ENST00000397505.2@MRPL52 ENST00000397505.2 protein_coding 22829913,22830050,22830187,22834172 22829940,22830110,22830254,22834347 Gene ID= ENSG00000172590.18 TPM= 3.62 Transcript Type= protein_coding chr14 22836557 22847761 22836557 22847761 + ENST00000311852.10@MMP14 ENST00000311852.10 protein_coding 22836557,22841491,22841913,22842410,22843257,22843710,22844371,22844630,22845251,22845708 22836925,22841639,22842035,22842717,22843418,22843870,22844509,22844780,22845366,22847761 Gene ID= ENSG00000157227.12 TPM= 25.36 Transcript Type= protein_coding chr14 22871613 22881580 22871613 22881580 + ENST00000359591.8@LRP10 ENST00000359591.8 protein_coding 22871613,22872738,22873311,22875055,22875355,22876689,22876940 22872337,22872782,22873446,22875245,22876372,22876818,22881580 Gene ID= ENSG00000197324.8 TPM= 344.71 Transcript Type= protein_coding chr14 22871774 22878080 22871774 22878080 + transcript331.chr14.nnic@LRP10 transcript331.chr14.nnic protein_coding 22871774,22872738,22873311,22875055,22875355,22876689,22876976 22872337,22872782,22873446,22875245,22876372,22876818,22878080 Gene ID= ENSG00000197324.8 TPM= 23.54 Transcript Type= NA chr14 22900646 22919191 22900646 22919191 - transcript341.chr14.nic@RBM23 transcript341.chr14.nic protein_coding 22918999,22911328,22909483,22908333,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900646 22919191,22911403,22909595,22908380,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733 Gene ID= ENSG00000100461.17 TPM= 10.59 Transcript Type= NA chr14 22900766 22919182 22900766 22919182 - ENST00000399922.6@RBM23 ENST00000399922.6 protein_coding 22918999,22911328,22909483,22906195,22905606,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900766 22919182,22911403,22909595,22906368,22905659,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733 Gene ID= ENSG00000100461.17 TPM= 52.7 Transcript Type= protein_coding chr14 22900777 22919178 22900777 22919178 - ENST00000346528.9@RBM23 ENST00000346528.9 protein_coding 22918999,22911328,22909483,22906195,22905336,22905094,22904875,22904261,22902187,22901980,22901814,22900777 22919178,22911403,22909595,22906368,22905453,22905246,22905012,22904326,22902382,22902099,22901883,22901733 Gene ID= ENSG00000100461.17 TPM= 14.67 Transcript Type= protein_coding chr14 22920530 22929401 22920530 22929401 - transcript358.chr14.nic@PRMT5 transcript358.chr14.nic protein_coding 22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920840,22920530 22929401,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056,22920731 Gene ID= ENSG00000100462.15 TPM= 7.54 Transcript Type= NA chr14 22920525 22929401 22920525 22929401 - ENST00000397441.6@PRMT5 ENST00000397441.6 protein_coding 22929167,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920525 22929401,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056 Gene ID= ENSG00000100462.15 TPM= 8.45 Transcript Type= protein_coding chr14 22920511 22929585 22920511 22929585 - ENST00000324366.12@PRMT5 ENST00000324366.12 protein_coding 22929252,22928497,22928126,22927526,22926702,22926506,22926133,22924879,22924632,22924479,22924270,22924008,22923051,22922742,22922443,22922176,22920511 22929585,22928615,22928211,22927660,22926814,22926555,22926296,22925040,22924709,22924537,22924392,22924183,22923160,22922835,22922559,22922240,22921056 Gene ID= ENSG00000100462.15 TPM= 66.4 Transcript Type= protein_coding chr14 22946236 22957149 22946236 22957149 - transcript367.chr14.nic@HAUS4 transcript367.chr14.nic protein_coding 22956746,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946236 22957149,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708 Gene ID= ENSG00000092036.18 TPM= 10.87 Transcript Type= NA chr14 22946229 22957142 22946229 22957142 - ENST00000541587.5@HAUS4 ENST00000541587.5 protein_coding 22956916,22955100,22952541,22952328,22951555,22950314,22947868,22947601,22947171,22946229 22957142,22955176,22952683,22952459,22951689,22950410,22948013,22947731,22947239,22946708 Gene ID= ENSG00000092036.18 TPM= 17.21 Transcript Type= protein_coding chr14 22946270 22957137 22946270 22957137 - ENST00000555986.5@HAUS4 ENST00000555986.5 protein_coding 22956746,22955100,22952541,22952328,22950314,22947868,22947601,22947171,22946270 22957137,22955176,22952683,22952459,22950410,22948013,22947731,22947239,22946708 Gene ID= ENSG00000092036.18 TPM= 1.81 Transcript Type= protein_coding chr14 22971174 22982642 22971174 22982642 - ENST00000262713.6@AJUBA ENST00000262713.6 protein_coding 22981261,22978344,22976645,22976456,22974974,22974839,22974047,22971174 22982642,22978445,22976712,22976518,22975104,22974890,22974115,22973568 Gene ID= ENSG00000129474.15 TPM= 9.06 Transcript Type= protein_coding chr14 23025851 23035145 23025851 23035145 - ENST00000361611.10@PSMB5 ENST00000361611.10 protein_coding 23034684,23033368,23025851 23035145,23033674,23026375 Gene ID= ENSG00000100804.18 TPM= 211.44 Transcript Type= protein_coding chr14 23025902 23035230 23025902 23035230 - ENST00000425762.2@PSMB5 ENST00000425762.2 protein_coding 23035112,23033368,23025902 23035230,23033674,23026375 Gene ID= ENSG00000100804.18 TPM= 1.81 Transcript Type= protein_coding chr14 23025858 23034890 23025858 23034890 - ENST00000493471.2@PSMB5 ENST00000493471.2 protein_coding 23034684,23033368,23027745,23025858 23034890,23033674,23027829,23026375 Gene ID= ENSG00000100804.18 TPM= 6.79 Transcript Type= protein_coding chr14 23051524 23057551 23051524 23057551 - transcript386.chr14.nic@CDH24 transcript386.chr14.nic protein_coding 23057403,23055533,23055059,23054747,23054506,23054141,23053496,23052473,23051524 23057551,23055857,23055353,23054866,23054673,23054328,23053749,23052609,23052083 Gene ID= ENSG00000139880.19 TPM= 1.81 Transcript Type= NA chr14 23058567 23095614 23058567 23095614 - ENST00000262710.5@ACIN1 ENST00000262710.5 protein_coding 23094975,23093479,23090522,23089982,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567 23095614,23093544,23090633,23090101,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474 Gene ID= ENSG00000100813.14 TPM= 10.5 Transcript Type= protein_coding chr14 23058567 23095614 23058567 23095614 - ENST00000457657.5@ACIN1 ENST00000457657.5 protein_coding 23094975,23093479,23090522,23081748,23079547,23078820,23078151,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567 23095614,23093544,23090633,23081836,23080809,23079038,23078266,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474 Gene ID= ENSG00000100813.14 TPM= 5.98 Transcript Type= protein_coding chr14 23058567 23071617 23058567 23071617 - ENST00000357481.6@ACIN1 ENST00000357481.6 protein_coding 23071427,23071125,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567 23071617,23071186,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474 Gene ID= ENSG00000100813.14 TPM= 4.77 Transcript Type= protein_coding chr14 23058567 23071574 23058567 23071574 - transcript395.chr14.nic@ACIN1 transcript395.chr14.nic protein_coding 23071427,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567 23071574,23069617,23066008,23064488,23064221,23063577,23063074,23062523,23062275,23061622,23061184,23059474 Gene ID= ENSG00000100813.14 TPM= 3.87 Transcript Type= NA chr14 23058567 23071561 23058567 23071561 - ENST00000338631.10@ACIN1 ENST00000338631.10 protein_coding 23071427,23069476,23065966,23064355,23064105,23063436,23062929,23062416,23062168,23061298,23061084,23058567 23071561,23069617,23066008,23064488,23064257,23063577,23063074,23062523,23062275,23061622,23061184,23059474 Gene ID= ENSG00000100813.14 TPM= 8.39 Transcript Type= protein_coding chr14 23125295 23183640 23125295 23183640 - ENST00000316902.11@SLC7A8 ENST00000316902.11 protein_coding 23182764,23166336,23165285,23143079,23140471,23139424,23137921,23131461,23129650,23128019,23125295 23183640,23166540,23165436,23143204,23140624,23139547,23138024,23131557,23129799,23128196,23127343 Gene ID= ENSG00000092068.19 TPM= 110.48 Transcript Type= protein_coding chr14 23295653 23301531 23295653 23301531 - transcript424.chr14.nic@PPP1R3E transcript424.chr14.nic protein_coding 23301398,23300758,23299401,23295653 23301531,23300864,23299541,23298917 Gene ID= ENSG00000235194.8 TPM= 3.62 Transcript Type= NA chr14 23306762 23311759 23306762 23311759 + ENST00000250405.9@BCL2L2 ENST00000250405.9 protein_coding 23306762,23307192,23307760,23308816 23306894,23307279,23308199,23311759 Gene ID= ENSG00000129473.9 TPM= 19.92 Transcript Type= protein_coding chr14 23306785 23326183 23306785 23326183 + transcript413.chr14.nnic@BCL2L2-PABPN1 transcript413.chr14.nnic protein_coding 23306785,23307192,23307760,23319735,23320832,23322181,23322999,23323377,23323965,23324138,23325247 23306894,23307279,23308199,23319830,23321820,23322295,23323066,23323483,23324052,23324289,23326183 Gene ID= ENSG00000258643.5 TPM= 112.89 Transcript Type= NA chr14 23321457 23326163 23321457 23326163 + ENST00000397276.6@PABPN1 ENST00000397276.6 protein_coding 23321457,23322181,23322999,23323377,23323965,23324138 23321820,23322295,23323066,23323483,23324052,23326163 Gene ID= ENSG00000100836.10 TPM= 40.45 Transcript Type= protein_coding chr14 23346314 23352912 23346314 23352912 - ENST00000397267.5@SLC22A17 ENST00000397267.5 protein_coding 23352646,23351948,23351752,23349272,23348506,23348161,23347891,23347460,23347101,23346314 23352912,23352451,23351855,23349426,23348671,23348306,23347996,23347731,23347212,23346936 Gene ID= ENSG00000092096.16 TPM= 4.07 Transcript Type= protein_coding chr14 23346312 23352904 23346312 23352904 - transcript435.chr14.nic@SLC22A17 transcript435.chr14.nic protein_coding 23352646,23351948,23351752,23349272,23348506,23348161,23347514,23347101,23346312 23352904,23352451,23351855,23349426,23348671,23348306,23347731,23347212,23346936 Gene ID= ENSG00000092096.16 TPM= 4.07 Transcript Type= NA chr14 23469688 23478193 23469688 23478193 + ENST00000408901.7@NGDN ENST00000408901.7 protein_coding 23469688,23470042,23470906,23475171,23475558,23475726,23476029,23476239,23477200,23477503,23478007 23469727,23470101,23470977,23475308,23475642,23475778,23476152,23476407,23477356,23477560,23478193 Gene ID= ENSG00000129460.15 TPM= 32.6 Transcript Type= protein_coding chr14 23556007 23559574 23556007 23559574 + ENST00000404535.3@THTPA ENST00000404535.3 protein_coding 23556007,23556743,23558695 23556343,23557304,23559574 Gene ID= ENSG00000259431.5 TPM= 18.11 Transcript Type= protein_coding chr14 23559566 23567788 23559566 23567788 - transcript448.chr14.nnic@AP1G2 transcript448.chr14.nnic protein_coding 23567739,23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559566 23567788,23567319,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563820,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850 Gene ID= ENSG00000213983.11 TPM= 3.03 Transcript Type= NA chr14 23559566 23567794 23559566 23567794 - transcript469.chr14.nic@AP1G2 transcript469.chr14.nic protein_coding 23567739,23567111,23566562,23566278,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559566 23567794,23567319,23566686,23566419,23566160,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850 Gene ID= ENSG00000213983.11 TPM= 4.84 Transcript Type= NA chr14 23559566 23567860 23559566 23567860 - transcript475.chr14.nic@AP1G2 transcript475.chr14.nic protein_coding 23567739,23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559566 23567860,23567319,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564221,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850 Gene ID= ENSG00000213983.11 TPM= 5.75 Transcript Type= NA chr14 23559568 23567803 23559568 23567803 - ENST00000397120.7@AP1G2 ENST00000397120.7 protein_coding 23567739,23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559568 23567803,23567319,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850 Gene ID= ENSG00000213983.11 TPM= 41.29 Transcript Type= protein_coding chr14 23559565 23568070 23559565 23568070 - ENST00000308724.9@AP1G2 ENST00000308724.9 protein_coding 23567111,23566562,23566278,23566064,23565816,23565606,23565119,23564562,23564333,23564046,23563716,23563584,23563380,23562504,23562288,23561962,23561512,23561296,23560255,23559938,23559565 23568070,23566686,23566419,23566160,23565892,23565701,23565199,23564660,23564388,23564159,23563856,23563638,23563502,23562593,23562415,23562066,23561635,23561431,23560418,23560036,23559850 Gene ID= ENSG00000213983.11 TPM= 4.17 Transcript Type= protein_coding chr14 23938731 23954197 23938731 23954197 - ENST00000556379.1@DHRS4-AS1 ENST00000556379.1 antisense_RNA 23953774,23938731 23954197,23941158 Gene ID= ENSG00000215256.3 TPM= 7.24 Transcript Type= antisense_RNA chr14 23953586 23969274 23953586 23969274 + ENST00000313250.9@DHRS4 ENST00000313250.9 protein_coding 23953586,23955035,23959902,23965762,23965932,23966283,23967211,23968757 23953916,23955212,23960003,23965832,23965983,23966417,23967266,23969274 Gene ID= ENSG00000157326.18 TPM= 41.66 Transcript Type= protein_coding chr14 23953733 24006411 23953733 24006411 + transcript514.chr14.nnic@DHRS4 transcript514.chr14.nnic protein_coding 23953733,23955035,23959902,24004337,24005886 23953916,23955212,23960003,24004392,24006411 Gene ID= ENSG00000157326.18 TPM= 3.17 Transcript Type= NA chr14 23953733 23964968 23953733 23964968 + transcript516.chr14.nnic@DHRS4 transcript516.chr14.nnic protein_coding 23953733,23955035,23959902,23964578 23953916,23955212,23960003,23964968 Gene ID= ENSG00000157326.18 TPM= 4.53 Transcript Type= NA chr14 23953789 23969279 23953789 23969279 + ENST00000558581.5@DHRS4 ENST00000558581.5 protein_coding 23953789,23955035,23965762,23965932,23966283,23967211,23968757 23953916,23955212,23965832,23965983,23966417,23967266,23969279 Gene ID= ENSG00000157326.18 TPM= 2.72 Transcript Type= protein_coding chr14 23953733 24006411 23953733 24006411 + transcript504.chr14.nnic@DHRS4L2 transcript504.chr14.nnic protein_coding 23953733,23955035,23959902,24000863,24001033,24001384,24004337,24005886 23953916,23955212,23960003,24000933,24001084,24001517,24004392,24006411 Gene ID= ENSG00000187630.15 TPM= 2.72 Transcript Type= NA chr14 23988822 24006408 23988822 24006408 + ENST00000335125.10@DHRS4L2 ENST00000335125.10 protein_coding 23988822,23990182,23995032,24000863,24001033,24001384,24004337,24005886 23989075,23990359,23995133,24000933,24001084,24001517,24004392,24006408 Gene ID= ENSG00000187630.15 TPM= 10.87 Transcript Type= protein_coding chr14 23988818 24006408 23988818 24006408 + ENST00000397071.5@DHRS4L2 ENST00000397071.5 protein_coding 23988818,23990182,23995032,24004337,24005886 23989075,23990359,23995133,24004392,24006408 Gene ID= ENSG00000187630.15 TPM= 16.75 Transcript Type= protein_coding chr14 23953733 24006411 23953733 24006411 + transcript518.chr14.nnic@DHRS4L2 transcript518.chr14.nnic protein_coding 23953733,23955035,24004337,24005886 23953916,23955212,24004392,24006411 Gene ID= ENSG00000187630.15 TPM= 3.17 Transcript Type= NA chr14 23988891 24000083 23988891 24000083 + transcript519.chr14.nnic@DHRS4L2 transcript519.chr14.nnic protein_coding 23988891,23990182,23995032,23999696 23989075,23990359,23995133,24000083 Gene ID= ENSG00000187630.15 TPM= 1.81 Transcript Type= NA chr14 23988899 24006411 23988899 24006411 + transcript520.chr14.nnic@DHRS4L2 transcript520.chr14.nnic protein_coding 23988899,23990182,24004337,24005886 23989075,23990359,24004392,24006411 Gene ID= ENSG00000187630.15 TPM= 3.17 Transcript Type= NA chr14 24078663 24115026 24078663 24115026 - transcript561.chr14.nnic@NRL transcript561.chr14.nnic protein_coding 24114722,24084520,24082783,24078663 24115026,24084745,24082875,24081568 Gene ID= ENSG00000129535.12 TPM= 3.62 Transcript Type= NA chr14 24080108 24115026 24080108 24115026 - transcript562.chr14.nic@NRL transcript562.chr14.nic protein_coding 24114722,24084520,24082468,24080108 24115026,24084745,24082875,24081568 Gene ID= ENSG00000129535.12 TPM= 8.6 Transcript Type= NA chr14 24080167 24115014 24080167 24115014 - ENST00000561028.5@NRL ENST00000561028.5 protein_coding 24114722,24082468,24080167 24115014,24082875,24081568 Gene ID= ENSG00000129535.12 TPM= 1.36 Transcript Type= protein_coding chr14 24094138 24104130 24094138 24104130 + ENST00000216780.8@PCK2 ENST00000216780.8 protein_coding 24094138,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103510 24094434,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104130 Gene ID= ENSG00000100889.11 TPM= 20.83 Transcript Type= protein_coding chr14 24094304 24104128 24094304 24104128 + transcript559.chr14.nic@PCK2 transcript559.chr14.nic protein_coding 24094304,24096892,24098203,24098475,24099049,24099558,24099995,24102753,24103160,24103842 24094434,24097137,24098387,24098678,24099236,24099720,24100213,24102890,24103255,24104128 Gene ID= ENSG00000100889.11 TPM= 2.72 Transcript Type= NA chr14 24114774 24125249 24114774 24125249 + transcript538.chr14.nic@DCAF11 transcript538.chr14.nic protein_coding 24114774,24115543,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175 24114924,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24125249 Gene ID= ENSG00000100897.17 TPM= 13.31 Transcript Type= NA chr14 24114813 24125249 24114813 24125249 + transcript553.chr14.nic@DCAF11 transcript553.chr14.nic protein_coding 24114813,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175 24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24125249 Gene ID= ENSG00000100897.17 TPM= 28.1 Transcript Type= NA chr14 24114780 24125240 24114780 24125240 + ENST00000446197.7@DCAF11 ENST00000446197.7 protein_coding 24114780,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175 24115293,24115749,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24125240 Gene ID= ENSG00000100897.17 TPM= 123.09 Transcript Type= protein_coding chr14 24115275 24124029 24115275 24124029 + ENST00000326009.9@DCAF11 ENST00000326009.9 protein_coding 24115275,24115382,24116917,24117266,24117668,24118055,24118388,24118750,24119145,24119559,24119711,24120838,24121365,24122971,24123175 24115293,24115726,24117044,24117393,24117732,24118155,24118534,24118804,24119213,24119616,24119896,24120991,24121517,24123077,24124029 Gene ID= ENSG00000100897.17 TPM= 14.43 Transcript Type= nonsense_mediated_decay chr14 24131275 24132849 24131275 24132849 + ENST00000267426.5@FITM1 ENST00000267426.5 protein_coding 24131275,24132211 24131829,24132849 Gene ID= ENSG00000139914.6 TPM= 24.45 Transcript Type= protein_coding chr14 24136382 24138968 24136382 24138968 + transcript590.chr14.nnic@PSME1 transcript590.chr14.nnic protein_coding 24136382,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474,24138736 24136498,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138560,24138968 Gene ID= ENSG00000092010.14 TPM= 77.65 Transcript Type= NA chr14 24136200 24138964 24136200 24138964 + ENST00000382708.7@PSME1 ENST00000382708.7 protein_coding 24136200,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474 24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138964 Gene ID= ENSG00000092010.14 TPM= 3.85 Transcript Type= protein_coding chr14 24136227 24138967 24136227 24138967 + ENST00000561435.5@PSME1 ENST00000561435.5 protein_coding 24136227,24136985,24137143,24137321,24137520,24137700,24138049,24138196,24138345,24138474,24138736 24136301,24137017,24137205,24137431,24137565,24137797,24138117,24138263,24138399,24138568,24138967 Gene ID= ENSG00000092010.14 TPM= 7.47 Transcript Type= protein_coding chr14 24138960 24141655 24138960 24141655 - transcript608.chr14.nic@EMC9 transcript608.chr14.nic protein_coding 24141107,24140889,24139545,24139360,24138960 24141655,24140965,24139789,24139454,24139196 Gene ID= ENSG00000100908.13 TPM= 3.62 Transcript Type= NA chr14 24138965 24141588 24138965 24141588 - ENST00000216799.8@EMC9 ENST00000216799.8 protein_coding 24141438,24141107,24140889,24139545,24139360,24138965 24141588,24141316,24140965,24139614,24139454,24139196 Gene ID= ENSG00000100908.13 TPM= 13.13 Transcript Type= protein_coding chr14 24138965 24141585 24138965 24141585 - ENST00000419198.6@EMC9 ENST00000419198.6 protein_coding 24141107,24140889,24139545,24139360,24138965 24141585,24140965,24139614,24139454,24139196 Gene ID= ENSG00000100908.13 TPM= 8.6 Transcript Type= protein_coding chr14 24143365 24147221 24143365 24147221 - ENST00000216802.9@PSME2 ENST00000216802.9 protein_coding 24146534,24146208,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143365 24147221,24146240,24145772,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489 Gene ID= ENSG00000100911.15 TPM= 193.79 Transcript Type= protein_coding chr14 24143365 24146605 24143365 24146605 - ENST00000560410.5@PSME2 ENST00000560410.5 protein_coding 24146534,24145710,24145379,24145243,24145058,24144400,24144192,24143975,24143585,24143365 24146605,24145772,24145465,24145273,24145155,24144468,24144259,24144029,24143671,24143489 Gene ID= ENSG00000100911.15 TPM= 6.34 Transcript Type= protein_coding chr14 24147501 24160661 24147501 24160661 + transcript571.chr14.nic@RNF31 transcript571.chr14.nic protein_coding 24147501,24147976,24148258,24148642,24148801,24149406,24150061,24150598,24151299,24151485,24151786,24155157,24155414,24155603,24157290,24157520,24157898,24158142,24159864,24160239,24160520 24147890,24148122,24148413,24148701,24148876,24149583,24150448,24150888,24151379,24151670,24151992,24155330,24155512,24155692,24157404,24157638,24158011,24158199,24159960,24160407,24160661 Gene ID= ENSG00000092098.16 TPM= 7.24 Transcript Type= NA chr14 24161224 24166563 24161224 24166563 + transcript627.chr14.nic@AL136295.5 transcript627.chr14.nic protein_coding 24161224,24162144,24162966,24163378,24163878,24164063,24166122 24161338,24162324,24163149,24163508,24163959,24165962,24166563 Gene ID= ENSG00000259529.1 TPM= 5.43 Transcript Type= NA chr14 24161224 24166563 24161224 24166563 + transcript612.chr14.nic@IRF9 transcript612.chr14.nic protein_coding 24161224,24162144,24162966,24163378,24163878,24164063,24164614,24165057,24165847,24166122 24161338,24162324,24163149,24163508,24163959,24164134,24164955,24165183,24165962,24166563 Gene ID= ENSG00000213928.8 TPM= 9.66 Transcript Type= NA chr14 24161053 24166565 24161053 24166565 + ENST00000396864.7@IRF9 ENST00000396864.7 protein_coding 24161053,24162144,24162966,24163378,24163878,24164063,24164614,24165847,24166122 24161338,24162324,24163149,24163508,24163959,24164134,24164955,24165962,24166565 Gene ID= ENSG00000213928.8 TPM= 133.63 Transcript Type= protein_coding chr14 24171853 24180257 24171853 24180257 + ENST00000620473.4@REC8 ENST00000620473.4 protein_coding 24171853,24172467,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178091,24178606,24178777,24179085,24179397,24179595,24179800,24180010 24172365,24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24177758,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180257 Gene ID= ENSG00000100918.12 TPM= 14.49 Transcript Type= protein_coding chr14 24172067 24180256 24172067 24180256 + transcript644.chr14.nic@REC8 transcript644.chr14.nic protein_coding 24172067,24172467,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178606,24178777,24179085,24179397,24179595,24179800,24180010 24172365,24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180256 Gene ID= ENSG00000100918.12 TPM= 1.81 Transcript Type= NA chr14 24172025 24180254 24172025 24180254 + ENST00000611366.4@REC8 ENST00000611366.4 protein_coding 24172025,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178091,24178606,24178777,24179085,24179397,24179595,24179800,24180010 24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24177758,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180254 Gene ID= ENSG00000100918.12 TPM= 4.53 Transcript Type= protein_coding chr14 24172033 24180256 24172033 24180256 + transcript648.chr14.nic@REC8 transcript648.chr14.nic protein_coding 24172033,24172713,24172899,24173126,24173291,24175543,24176822,24177141,24177353,24177465,24177709,24178606,24178777,24179085,24179397,24179595,24179800,24180010 24172608,24172781,24173041,24173198,24173411,24175624,24176901,24177222,24177383,24177541,24178222,24178672,24178916,24179133,24179463,24179726,24179906,24180256 Gene ID= ENSG00000100918.12 TPM= 1.81 Transcript Type= NA chr14 24180209 24188793 24180209 24188793 - transcript638.chr14.nnic@AL136295.4 transcript638.chr14.nnic protein_coding 24188719,24188552,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182278,24181955,24181711,24181513,24180689,24180209 24188793,24188638,24188423,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182403,24182163,24181843,24181617,24180758,24180572 Gene ID= ENSG00000259522.3 TPM= 3.02 Transcript Type= NA chr14 24180219 24188964 24180219 24188964 - ENST00000354464.10@IPO4 ENST00000354464.10 protein_coding 24188719,24188552,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180219 24188964,24188638,24188423,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572 Gene ID= ENSG00000196497.16 TPM= 46.93 Transcript Type= protein_coding chr14 24180219 24188822 24180219 24188822 - ENST00000561090.5@IPO4 ENST00000561090.5 protein_coding 24188719,24188344,24188216,24187667,24187400,24187085,24186878,24186708,24186287,24186129,24185861,24185459,24185183,24184867,24184650,24184298,24183998,24183783,24183590,24183456,24183250,24182976,24182792,24182278,24181955,24181711,24181513,24180689,24180219 24188822,24188638,24188257,24187796,24187579,24187150,24186979,24186791,24186451,24186182,24185970,24185567,24185312,24184980,24184763,24184418,24184109,24183898,24183667,24183513,24183355,24183169,24182842,24182403,24182163,24181843,24181617,24180758,24180572 Gene ID= ENSG00000196497.16 TPM= 8 Transcript Type= retained_intron chr14 24189141 24195723 24189141 24195723 - transcript658.chr14.nic@TM9SF1 transcript658.chr14.nic protein_coding 24195309,24194675,24192648,24192171,24190380,24189141 24195723,24195036,24193269,24192356,24190653,24189808 Gene ID= ENSG00000100926.14 TPM= 14.49 Transcript Type= NA chr14 24189143 24195687 24189143 24195687 - ENST00000261789.8@TM9SF1 ENST00000261789.8 protein_coding 24195346,24194675,24192648,24192171,24190380,24189143 24195687,24195036,24193269,24192356,24190653,24189808 Gene ID= ENSG00000100926.14 TPM= 185.26 Transcript Type= protein_coding chr14 24189141 24196004 24189141 24196004 - transcript665.chr14.nic@TM9SF1 transcript665.chr14.nic protein_coding 24195346,24194675,24190380,24189141 24196004,24195036,24193269,24189808 Gene ID= ENSG00000100926.14 TPM= 16.83 Transcript Type= NA chr14 24189192 24195453 24189192 24195453 - ENST00000529332.5@TM9SF1 ENST00000529332.5 protein_coding 24195346,24194675,24192648,24192171,24190380,24189192 24195453,24195036,24193269,24192356,24190591,24189808 Gene ID= ENSG00000100926.14 TPM= 2.94 Transcript Type= nonsense_mediated_decay chr14 24190042 24195618 24190042 24195618 - ENST00000396854.8@TM9SF1 ENST00000396854.8 protein_coding 24195346,24194675,24192648,24192171,24190042 24195618,24195036,24193269,24192356,24190653 Gene ID= ENSG00000100926.14 TPM= 9.58 Transcript Type= protein_coding chr14 24209583 24213869 24209583 24213869 - ENST00000347519.10@CHMP4A ENST00000347519.10 protein_coding 24213409,24211680,24211415,24210654,24210348,24209583 24213869,24211829,24211592,24210768,24210483,24209935 Gene ID= ENSG00000254505.9 TPM= 77.42 Transcript Type= protein_coding chr14 24209860 24213488 24209860 24213488 - ENST00000609024.5@CHMP4A ENST00000609024.5 protein_coding 24213409,24211680,24211415,24210654,24210348,24209860 24213488,24211829,24211592,24210768,24210483,24209935 Gene ID= ENSG00000254505.9 TPM= 2.72 Transcript Type= protein_coding chr14 24209583 24213522 24209583 24213522 - transcript703.chr14.nic@AL096870.2 transcript703.chr14.nic processed_transcript 24211680,24211415,24210654,24210348,24209583 24213522,24211592,24210768,24210483,24209935 Gene ID= ENSG00000260669.2 TPM= 4.98 Transcript Type= NA chr14 24213937 24216067 24213937 24216067 - ENST00000288087.11@MDP1 ENST00000288087.11 protein_coding 24215919,24215737,24215552,24214492,24214310,24213937 24216067,24215797,24215662,24214599,24214395,24214151 Gene ID= ENSG00000213920.8 TPM= 18.11 Transcript Type= protein_coding chr14 24213943 24216065 24213943 24216065 - ENST00000396833.2@MDP1 ENST00000396833.2 protein_coding 24215919,24215737,24215552,24214546,24213943 24216065,24215797,24215662,24214599,24214151 Gene ID= ENSG00000213920.8 TPM= 1.81 Transcript Type= protein_coding chr14 24216852 24232454 24216852 24232454 - ENST00000250495.9@NEDD8 ENST00000250495.9 protein_coding 24232250,24218384,24218133,24216852 24232454,24218431,24218215,24217223 Gene ID= ENSG00000129559.12 TPM= 148.96 Transcript Type= protein_coding chr14 24216866 24232325 24216866 24232325 - ENST00000531430.5@NEDD8 ENST00000531430.5 protein_coding 24232250,24231652,24218384,24218133,24216866 24232325,24231737,24218431,24218215,24217223 Gene ID= ENSG00000129559.12 TPM= 7.7 Transcript Type= processed_transcript chr14 24226605 24232355 24226605 24232355 - ENST00000533242.1@NEDD8 ENST00000533242.1 protein_coding 24232250,24231652,24226605 24232355,24231737,24228712 Gene ID= ENSG00000129559.12 TPM= 7.24 Transcript Type= processed_transcript chr14 24232422 24239242 24232422 24239242 + ENST00000355299.8@GMPR2 ENST00000355299.8 protein_coding 24232422,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589 24232847,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242 Gene ID= ENSG00000100938.17 TPM= 29.08 Transcript Type= protein_coding chr14 24232872 24239242 24232872 24239242 + ENST00000399440.6@GMPR2 ENST00000399440.6 protein_coding 24232872,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589 24232977,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242 Gene ID= ENSG00000100938.17 TPM= 29.08 Transcript Type= protein_coding chr14 24232442 24239242 24232442 24239242 + ENST00000559836.5@GMPR2 ENST00000559836.5 protein_coding 24232442,24233219,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589 24232788,24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242 Gene ID= ENSG00000100938.17 TPM= 87.03 Transcript Type= protein_coding chr14 24232901 24239242 24232901 24239242 + ENST00000420554.6@GMPR2 ENST00000420554.6 protein_coding 24232901,24233479,24235737,24235967,24237071,24237245,24237520,24238246,24238589 24233340,24233598,24235820,24236140,24237152,24237351,24237562,24238405,24239242 Gene ID= ENSG00000100938.17 TPM= 18.21 Transcript Type= protein_coding chr14 24239647 24243034 24239647 24243034 - transcript689.chr14.nic@TINF2 transcript689.chr14.nic protein_coding 24242141,24241890,24241675,24241204,24241020,24240419,24240263,24239647 24243034,24241994,24241776,24241311,24241116,24240875,24240330,24240155 Gene ID= ENSG00000092330.15 TPM= 18.59 Transcript Type= NA chr14 24236468 24241858 24236468 24241858 - transcript712.chr14.nic@TINF2 transcript712.chr14.nic protein_coding 24241675,24241204,24241020,24236468 24241858,24241311,24241116,24240875 Gene ID= ENSG00000092330.15 TPM= 9.06 Transcript Type= NA chr14 24239643 24242674 24239643 24242674 - ENST00000267415.11@TINF2 ENST00000267415.11 protein_coding 24242141,24241890,24241675,24241204,24241020,24240419,24240263,24240064,24239643 24242674,24241994,24241776,24241311,24241116,24240875,24240330,24240155,24239931 Gene ID= ENSG00000092330.15 TPM= 42.29 Transcript Type= protein_coding chr14 24239643 24242663 24239643 24242663 - ENST00000399423.8@TINF2 ENST00000399423.8 protein_coding 24242141,24241890,24241675,24241204,24241020,24239643 24242663,24241994,24241776,24241311,24241116,24240875 Gene ID= ENSG00000092330.15 TPM= 147.18 Transcript Type= protein_coding chr14 24265538 24271739 24265538 24271739 - ENST00000216840.10@RABGGTA ENST00000216840.10 protein_coding 24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538 24271739,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763 Gene ID= ENSG00000100949.14 TPM= 51.52 Transcript Type= protein_coding chr14 24265538 24271617 24265538 24271617 - transcript718.chr14.nic@RABGGTA transcript718.chr14.nic protein_coding 24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538 24271617,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763 Gene ID= ENSG00000100949.14 TPM= 7.3 Transcript Type= NA chr14 24265538 24271599 24265538 24271599 - ENST00000399409.7@RABGGTA ENST00000399409.7 protein_coding 24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266776,24266430,24265538 24271599,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763 Gene ID= ENSG00000100949.14 TPM= 13.64 Transcript Type= protein_coding chr14 24265538 24271620 24265538 24271620 - transcript725.chr14.nic@RABGGTA transcript725.chr14.nic protein_coding 24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267870,24267660,24266430,24265538 24271620,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24265763 Gene ID= ENSG00000100949.14 TPM= 5.87 Transcript Type= NA chr14 24265538 24271538 24265538 24271538 - transcript726.chr14.nic@RABGGTA transcript726.chr14.nic protein_coding 24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268110,24267870,24267660,24266776,24266430,24265538 24271538,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24267958,24267776,24266889,24266517,24265763 Gene ID= ENSG00000100949.14 TPM= 2.84 Transcript Type= NA chr14 24265538 24271620 24265538 24271620 - transcript727.chr14.nic@RABGGTA transcript727.chr14.nic protein_coding 24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268110,24267870,24267660,24266430,24265538 24271620,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24267958,24267776,24266889,24265763 Gene ID= ENSG00000100949.14 TPM= 4.96 Transcript Type= NA chr14 24265556 24271549 24265556 24271549 - ENST00000559974.5@RABGGTA ENST00000559974.5 protein_coding 24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268369,24268110,24267866,24267660,24266776,24266430,24265556 24271549,24271248,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24268198,24267958,24267776,24266889,24266517,24265763 Gene ID= ENSG00000100949.14 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr14 24265570 24271510 24265570 24271510 - ENST00000560998.5@RABGGTA ENST00000560998.5 protein_coding 24271487,24271113,24270837,24270334,24269953,24269491,24269080,24268911,24268725,24268514,24268110,24267870,24267660,24266776,24266430,24265570 24271510,24271169,24270947,24270458,24270140,24269694,24269163,24268993,24268826,24268619,24268420,24267958,24267776,24266889,24266517,24265763 Gene ID= ENSG00000100949.14 TPM= 1.81 Transcript Type= retained_intron chr14 24271221 24298851 24271221 24298851 + transcript737.chr14.nnic@NA transcript737.chr14.nnic NA 24271221,24292198,24292437,24298614 24271310,24292352,24292600,24298851 Gene ID= novel_gene_chr14_738 TPM= 3.62 Transcript Type= NA chr14 24290598 24299833 24290598 24299833 - ENST00000288111.11@DHRS1 ENST00000288111.11 protein_coding 24299581,24298957,24296738,24296509,24292652,24292184,24291556,24291139,24290598 24299833,24299130,24296881,24296588,24292784,24292330,24291625,24291219,24290995 Gene ID= ENSG00000157379.13 TPM= 42.29 Transcript Type= protein_coding chr14 24290600 24299768 24290600 24299768 - transcript732.chr14.nic@DHRS1 transcript732.chr14.nic protein_coding 24299581,24298957,24296738,24296509,24292184,24291556,24291139,24290600 24299768,24299130,24296881,24296588,24292784,24291625,24291219,24290995 Gene ID= ENSG00000157379.13 TPM= 3.35 Transcript Type= NA chr14 24290600 24299820 24290600 24299820 - transcript733.chr14.nic@DHRS1 transcript733.chr14.nic protein_coding 24299581,24298957,24296738,24296509,24292652,24292184,24291139,24290600 24299820,24299130,24296881,24296588,24292784,24292330,24291219,24290995 Gene ID= ENSG00000157379.13 TPM= 7.88 Transcript Type= NA chr14 24290600 24299820 24290600 24299820 - transcript734.chr14.nic@DHRS1 transcript734.chr14.nic protein_coding 24299581,24298957,24296738,24296509,24292184,24291139,24290600 24299820,24299130,24296881,24296588,24292784,24291219,24290995 Gene ID= ENSG00000157379.13 TPM= 3.35 Transcript Type= NA chr14 24290600 24299820 24290600 24299820 - transcript736.chr14.nic@DHRS1 transcript736.chr14.nic protein_coding 24299581,24298957,24296738,24296509,24291139,24290600 24299820,24299130,24296881,24296588,24292784,24290995 Gene ID= ENSG00000157379.13 TPM= 2.9 Transcript Type= NA chr14 24299862 24309124 24299862 24309124 + ENST00000267425.7@NOP9 ENST00000267425.7 protein_coding 24299862,24300408,24301612,24301965,24302232,24303074,24303732,24304041,24304493,24304938 24300201,24300857,24301722,24302106,24302424,24303214,24303857,24304277,24304598,24309124 Gene ID= ENSG00000196943.12 TPM= 7.24 Transcript Type= protein_coding chr14 24305189 24311435 24305189 24311435 - transcript743.chr14.nic@CIDEB transcript743.chr14.nic protein_coding 24311228,24310649,24308479,24307818,24307371,24306374,24305947,24305189 24311435,24311147,24308830,24307920,24307515,24306523,24306137,24305765 Gene ID= ENSG00000136305.11 TPM= 3.2 Transcript Type= NA chr14 24305189 24311484 24305189 24311484 - transcript746.chr14.nnic@CIDEB transcript746.chr14.nnic protein_coding 24310649,24308479,24307818,24307371,24306374,24305947,24305189 24311484,24308830,24307953,24307515,24306523,24306137,24305765 Gene ID= ENSG00000136305.11 TPM= 6.52 Transcript Type= NA chr14 24303518 24311484 24303518 24311484 - transcript749.chr14.nnic@CIDEB transcript749.chr14.nnic protein_coding 24310649,24308479,24307371,24306374,24305947,24303518 24311484,24308830,24307515,24306523,24306137,24305765 Gene ID= ENSG00000136305.11 TPM= 11.05 Transcript Type= NA chr14 24305187 24311422 24305187 24311422 - ENST00000258807.5@CIDEB ENST00000258807.5 protein_coding 24310649,24308479,24307818,24307371,24306374,24305947,24305187 24311422,24308830,24307920,24307515,24306523,24306137,24305765 Gene ID= ENSG00000136305.11 TPM= 58.89 Transcript Type= protein_coding chr14 24305187 24311395 24305187 24311395 - ENST00000336557.9@CIDEB ENST00000336557.9 protein_coding 24310649,24310407,24308479,24307818,24307371,24306374,24305947,24305187 24311395,24310548,24308830,24307920,24307515,24306523,24306137,24305765 Gene ID= ENSG00000136305.11 TPM= 3.65 Transcript Type= protein_coding chr14 24313311 24318036 24313311 24318036 + ENST00000396789.4@LTB4R ENST00000396789.4 protein_coding 24313311,24315637 24315020,24318036 Gene ID= ENSG00000213903.8 TPM= 1.81 Transcript Type= protein_coding chr14 24311499 24316946 24311499 24316946 + ENST00000345363.7@LTB4R ENST00000345363.7 protein_coding 24311499,24315637 24311804,24316946 Gene ID= ENSG00000213903.8 TPM= 2.72 Transcript Type= protein_coding chr14 24318336 24335094 24318336 24335094 - transcript765.chr14.nic@ADCY4 transcript765.chr14.nic protein_coding 24334494,24332522,24331788,24331208,24331018,24330168,24329860,24329401,24329061,24326299,24326079,24325818,24325377,24324307,24324062,24323344,24322904,24322624,24322066,24319742,24319329,24319098,24318654,24318336 24335094,24332988,24331937,24331356,24331129,24330327,24330018,24329533,24329234,24326342,24326165,24325887,24325474,24324391,24324199,24323454,24323088,24322708,24322224,24319888,24319436,24319212,24318778,24318568 Gene ID= ENSG00000129467.13 TPM= 3.17 Transcript Type= NA chr14 24318349 24335071 24318349 24335071 - ENST00000310677.8@ADCY4 ENST00000310677.8 protein_coding 24334984,24334494,24332791,24332522,24331788,24331208,24331018,24330168,24329860,24329401,24329061,24326299,24326079,24325818,24325377,24324307,24324062,24323344,24322904,24322624,24322066,24319742,24319329,24319098,24318654,24318349 24335071,24334678,24332988,24332683,24331937,24331356,24331129,24330295,24330018,24329533,24329234,24326342,24326165,24325887,24325474,24324391,24324199,24323454,24323088,24322708,24322224,24319888,24319436,24319212,24318778,24318568 Gene ID= ENSG00000129467.13 TPM= 1.36 Transcript Type= protein_coding chr14 24336021 24340045 24336021 24340045 - ENST00000216274.9@RIPK3 ENST00000216274.9 protein_coding 24339807,24339457,24339015,24338422,24338249,24337873,24337695,24337086,24336885,24336021 24340045,24339597,24339324,24338567,24338295,24338040,24337762,24337460,24336945,24336395 Gene ID= ENSG00000129465.15 TPM= 2.72 Transcript Type= protein_coding chr14 24368020 24378056 24368020 24378056 + ENST00000554050.5@NFATC4 ENST00000554050.5 protein_coding 24368020,24369499,24372441,24373171,24373695,24374326,24375660,24375975,24376294,24377638 24368440,24370594,24372603,24373370,24373867,24374466,24375715,24376101,24376554,24378056 Gene ID= ENSG00000100968.13 TPM= 3.62 Transcript Type= protein_coding chr14 24398786 24419288 24398786 24419288 + ENST00000382554.3@NYNRIN ENST00000382554.3 protein_coding 24398786,24399230,24407869,24408652,24411076,24411354,24412997,24413316,24414596 24399086,24399444,24408527,24410208,24411206,24411450,24413098,24413417,24419288 Gene ID= ENSG00000205978.5 TPM= 7.24 Transcript Type= protein_coding chr14 24426536 24430980 24426536 24430980 - transcript809.chr14.nnic@CBLN3 transcript809.chr14.nnic protein_coding 24430739,24428755,24428286,24426536 24430980,24429387,24428405,24427986 Gene ID= ENSG00000139899.10 TPM= 5.43 Transcript Type= NA chr14 24430253 24441347 24430253 24441347 + transcript791.chr14.nic@KHNYN transcript791.chr14.nic protein_coding 24430253,24431463,24432722,24432936,24436072,24436388,24437036 24430931,24432610,24432852,24433032,24436179,24436489,24441347 Gene ID= ENSG00000100441.9 TPM= 14.04 Transcript Type= NA chr14 24429934 24434386 24429934 24434386 + transcript792.chr14.nnic@KHNYN transcript792.chr14.nnic protein_coding 24429934,24430714,24431463,24432722,24432936,24434100 24430119,24430931,24432610,24432852,24433032,24434386 Gene ID= ENSG00000100441.9 TPM= 1.81 Transcript Type= NA chr14 24429938 24438408 24429938 24438408 + ENST00000553935.5@KHNYN ENST00000553935.5 protein_coding 24429938,24430714,24431463,24432722,24432936,24436072,24436388,24437036 24430119,24430931,24432610,24432852,24433032,24436179,24436489,24438408 Gene ID= ENSG00000100441.9 TPM= 28.52 Transcript Type= protein_coding chr14 24439761 24442904 24439761 24442904 - transcript796.chr14.nic@SDR39U1 transcript796.chr14.nic protein_coding 24442818,24442346,24442178,24441674,24440783,24439761 24442904,24442452,24442260,24441795,24440926,24440492 Gene ID= ENSG00000100445.17 TPM= 10.59 Transcript Type= NA chr14 24439766 24442803 24439766 24442803 - ENST00000399395.7@SDR39U1 ENST00000399395.7 protein_coding 24442754,24442346,24442178,24441674,24440783,24439766 24442803,24442452,24442260,24441795,24440926,24440492 Gene ID= ENSG00000100445.17 TPM= 92.09 Transcript Type= protein_coding chr14 24439761 24442788 24439761 24442788 - transcript801.chr14.nic@SDR39U1 transcript801.chr14.nic protein_coding 24442346,24442098,24441674,24440783,24439761 24442788,24442260,24441795,24440926,24440492 Gene ID= ENSG00000100445.17 TPM= 7.43 Transcript Type= NA chr14 24439761 24442802 24439761 24442802 - transcript808.chr14.nic@SDR39U1 transcript808.chr14.nic protein_coding 24442754,24442346,24442178,24440783,24439761 24442802,24442452,24442260,24440926,24440492 Gene ID= ENSG00000100445.17 TPM= 4.71 Transcript Type= NA chr14 24439780 24442776 24439780 24442776 - ENST00000556262.5@SDR39U1 ENST00000556262.5 protein_coding 24441674,24440783,24439780 24442776,24440926,24440492 Gene ID= ENSG00000100445.17 TPM= 4.53 Transcript Type= retained_intron chr14 24439782 24442448 24439782 24442448 - ENST00000538105.6@SDR39U1 ENST00000538105.6 protein_coding 24442346,24442178,24440783,24439782 24442448,24442260,24440926,24440492 Gene ID= ENSG00000100445.17 TPM= 9.06 Transcript Type= protein_coding chr14 29576481 29725677 29576481 29725677 - transcript825.chr14.nic@PRKD1 transcript825.chr14.nic protein_coding 29725536,29666077,29663699,29656476,29638694,29638489,29636290,29634418,29632869,29630742,29629041,29626484,29624152,29599656,29599027,29597491,29578275,29576481 29725677,29666208,29663859,29656499,29638904,29638566,29636494,29634541,29632946,29631021,29629093,29626556,29624258,29599817,29599125,29597758,29578360,29577456 Gene ID= ENSG00000184304.14 TPM= 3.02 Transcript Type= NA chr14 29576481 29725676 29576481 29725676 - transcript826.chr14.nnic@PRKD1 transcript826.chr14.nnic protein_coding 29725536,29724470,29666077,29663699,29638694,29638489,29636290,29634418,29632869,29630742,29629041,29626484,29624152,29599656,29599027,29597491,29578275,29576481 29725676,29724545,29666208,29663859,29638904,29638566,29636494,29634541,29632946,29631021,29629093,29626556,29624258,29599817,29599125,29597758,29578360,29577456 Gene ID= ENSG00000184304.14 TPM= 3.02 Transcript Type= NA chr14 30559123 30620063 30559123 30620063 + ENST00000206595.10@G2E3 ENST00000206595.10 protein_coding 30559123,30581076,30586718,30589383,30592323,30593474,30597420,30598483,30601770,30601999,30605505,30607888,30612207,30615349,30616278 30559272,30581116,30586815,30589484,30592447,30593639,30597526,30598599,30601894,30602131,30605812,30608069,30612379,30615539,30620063 Gene ID= ENSG00000092140.14 TPM= 4.53 Transcript Type= protein_coding chr14 30622112 30735812 30622112 30735812 + ENST00000458591.6@SCFD1 ENST00000458591.6 protein_coding 30622112,30628209,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586 30622399,30628279,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735812 Gene ID= ENSG00000092108.20 TPM= 36.22 Transcript Type= protein_coding chr14 30622318 30735812 30622318 30735812 + transcript839.chr14.nic@SCFD1 transcript839.chr14.nic protein_coding 30622318,30628209,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586 30622462,30628279,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735812 Gene ID= ENSG00000092108.20 TPM= 1.81 Transcript Type= NA chr14 30622319 30735789 30622319 30735789 + ENST00000544052.6@SCFD1 ENST00000544052.6 protein_coding 30622319,30630477,30633947,30638125,30639777,30643316,30649528,30650565,30653489,30670256,30673257,30673924,30674984,30694773,30700188,30702296,30705823,30707990,30715924,30719325,30721884,30722494,30734790,30735586 30622399,30630565,30634037,30638247,30639864,30643405,30649583,30650650,30653588,30670395,30673347,30673997,30675065,30694869,30700258,30702375,30705885,30708065,30715977,30719377,30721917,30722559,30734858,30735789 Gene ID= ENSG00000092108.20 TPM= 7.24 Transcript Type= protein_coding chr14 30893799 31026401 30893799 31026401 - ENST00000355683.9@STRN3 ENST00000355683.9 protein_coding 31025904,30956139,30955620,30950863,30947090,30936495,30935163,30913524,30912007,30911777,30911041,30906877,30905418,30902536,30895662,30893799 31026401,30956242,30955693,30950944,30947263,30936624,30935304,30913657,30912182,30911824,30911162,30907044,30905558,30902643,30895748,30895580 Gene ID= ENSG00000196792.11 TPM= 22.64 Transcript Type= protein_coding chr14 31025466 31096450 31025466 31096450 + ENST00000542754.6@AP4S1 ENST00000542754.6 protein_coding 31025466,31066126,31069843,31072905,31080573,31092907 31025787,31066334,31069929,31072973,31080584,31096450 Gene ID= ENSG00000100478.14 TPM= 3.62 Transcript Type= protein_coding chr14 31100116 31208169 31100116 31208169 - transcript846.chr14.nic@HECTD1 transcript846.chr14.nic protein_coding 31207016,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122914,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100116 31208169,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129307,31128006,31123047,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067 Gene ID= ENSG00000092148.12 TPM= 5.89 Transcript Type= NA chr14 31100116 31207707 31100116 31207707 - transcript847.chr14.nic@HECTD1 transcript847.chr14.nic protein_coding 31207391,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122914,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100116 31207707,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129307,31128006,31123047,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067 Gene ID= ENSG00000092148.12 TPM= 5.89 Transcript Type= NA chr14 31172949 31208143 31172949 31208143 - transcript855.chr14.nic@HECTD1 transcript855.chr14.nic protein_coding 31207391,31205797,31178020,31174911,31173525,31172949 31208143,31205957,31178254,31175138,31173806,31173426 Gene ID= ENSG00000092148.12 TPM= 2.72 Transcript Type= NA chr14 31100118 31207483 31100118 31207483 - ENST00000399332.5@HECTD1 ENST00000399332.5 protein_coding 31207016,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122914,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100118 31207483,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129448,31128006,31123047,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067 Gene ID= ENSG00000092148.12 TPM= 5.43 Transcript Type= protein_coding chr14 31100118 31207804 31100118 31207804 - ENST00000553700.5@HECTD1 ENST00000553700.5 protein_coding 31207391,31205797,31178020,31174911,31173525,31173156,31172046,31171861,31169354,31168298,31157165,31156840,31149999,31148897,31148721,31144807,31144111,31141858,31139892,31136531,31135476,31134872,31133509,31133238,31128612,31127785,31122914,31121383,31119710,31116236,31114286,31113877,31113277,31113104,31112416,31109397,31107567,31106646,31105590,31105383,31102916,31101180,31100118 31207804,31205957,31178254,31175138,31173806,31173426,31172122,31171959,31169468,31168472,31157303,31157010,31150221,31149160,31148797,31144941,31144257,31141952,31139997,31136665,31135615,31135195,31133675,31133414,31129448,31128006,31123047,31121505,31119866,31116458,31114340,31114059,31113484,31113189,31112543,31109598,31107704,31107253,31105668,31105476,31103066,31101324,31101067 Gene ID= ENSG00000092148.12 TPM= 7.24 Transcript Type= protein_coding chr14 31291789 31420550 31291789 31420550 - transcript856.chr14.nnic@HEATR5A transcript856.chr14.nnic protein_coding 31420472,31410491,31402850,31400301,31398673,31395199,31394052,31388845,31387120,31386420,31383521,31380467,31374816,31371810,31364189,31358894,31358637,31350612,31349789,31347748,31345087,31343896,31337476,31326163,31323565,31321499,31318224,31315770,31312968,31308934,31307893,31306732,31304905,31302295,31295909,31293891,31291789 31420550,31410544,31403049,31400512,31398781,31395348,31394226,31389005,31387375,31386527,31383771,31380578,31374968,31371909,31364298,31359057,31358812,31350717,31349979,31347907,31345276,31344065,31337614,31326342,31323804,31321680,31318292,31315949,31313190,31309182,31308020,31306879,31305177,31302519,31296063,31294104,31293612 Gene ID= ENSG00000129493.14 TPM= 3.62 Transcript Type= NA chr14 31291791 31420582 31291791 31420582 - ENST00000543095.6@HEATR5A ENST00000543095.6 protein_coding 31420472,31402850,31400301,31398673,31395199,31394052,31388845,31387120,31386420,31383521,31380467,31374816,31371810,31364189,31358894,31358637,31350612,31349789,31347748,31345087,31343896,31337476,31326163,31323565,31321499,31318224,31315770,31312968,31308934,31307893,31306732,31304905,31302295,31295909,31293891,31291791 31420582,31403049,31400512,31398781,31395348,31394226,31389005,31387375,31386575,31383771,31380578,31374968,31371909,31364298,31359057,31358812,31350717,31349979,31347907,31345276,31344065,31337614,31326342,31323804,31321680,31318292,31315949,31313190,31309182,31308020,31306879,31305177,31302519,31296063,31294104,31293612 Gene ID= ENSG00000129493.14 TPM= 4.53 Transcript Type= protein_coding chr14 31446039 31457464 31446039 31457464 - transcript866.chr14.nnic@DTD2 transcript866.chr14.nnic protein_coding 31457029,31453275,31447645,31446039 31457464,31453344,31448454,31447226 Gene ID= ENSG00000129480.12 TPM= 1.81 Transcript Type= NA chr14 31446036 31457510 31446036 31457510 - ENST00000310850.8@DTD2 ENST00000310850.8 protein_coding 31457283,31453275,31446036 31457510,31453344,31448454 Gene ID= ENSG00000129480.12 TPM= 2.72 Transcript Type= protein_coding chr14 31561390 31861193 31561390 31861193 + transcript872.chr14.nic@NUBPL transcript872.chr14.nic protein_coding 31561390,31562068,31565014,31599289,31654070,31673355,31673484,31787780,31826629,31846471,31850119,31859118 31561547,31562215,31565048,31599379,31654134,31673394,31673574,31787873,31826714,31846591,31850201,31861193 Gene ID= ENSG00000151413.16 TPM= 2.26 Transcript Type= NA chr14 31561395 31861224 31561395 31861224 + ENST00000281081.11@NUBPL ENST00000281081.11 protein_coding 31561395,31562068,31565014,31599289,31673355,31673484,31787780,31826629,31846471,31850119,31859118 31561547,31562215,31565048,31599379,31673394,31673574,31787873,31826714,31846591,31850201,31861224 Gene ID= ENSG00000151413.16 TPM= 23.09 Transcript Type= protein_coding chr14 32077289 32159728 32077289 32159728 + ENST00000345122.7@ARHGAP5 ENST00000345122.7 protein_coding 32077289,32090502,32117140,32146263,32149902,32152423,32154621 32077435,32094386,32117287,32146340,32150033,32152528,32159728 Gene ID= ENSG00000100852.12 TPM= 5.43 Transcript Type= protein_coding chr14 32077074 32159728 32077074 32159728 + ENST00000396582.6@ARHGAP5 ENST00000396582.6 protein_coding 32077074,32146263,32149902,32152423,32154621 32077435,32146340,32150033,32152528,32159728 Gene ID= ENSG00000100852.12 TPM= 4.53 Transcript Type= protein_coding chr14 32203539 32734612 32203539 32734612 + transcript881.chr14.nnic@AKAP6 transcript881.chr14.nnic protein_coding 32203539,32285965,32329197,32433460,32535554,32545230,32577120,32599410,32600629,32678311,32695990,32732454 32203723,32286078,32329408,32433817,32535805,32546999,32577242,32599506,32600792,32678459,32696110,32734612 Gene ID= ENSG00000151320.10 TPM= 2.72 Transcript Type= NA chr14 33924231 33951081 33924231 33951081 - ENST00000250457.7@EGLN3 ENST00000250457.7 protein_coding 33950396,33931096,33929076,33926960,33924231 33951081,33931215,33929212,33927033,33925922 Gene ID= ENSG00000129521.13 TPM= 3.62 Transcript Type= protein_coding chr14 34432789 34462356 34432789 34462356 - ENST00000298130.4@SPTSSA ENST00000298130.4 protein_coding 34462096,34432789 34462356,34435304 Gene ID= ENSG00000165389.6 TPM= 184.73 Transcript Type= protein_coding chr14 34515939 34539742 34515939 34539742 - transcript889.chr14.nnic@EAPP transcript889.chr14.nnic protein_coding 34539555,34536094,34533444,34524697,34515939 34539742,34536275,34533539,34524807,34516586 Gene ID= ENSG00000129518.8 TPM= 3.62 Transcript Type= NA chr14 34515929 34539710 34515929 34539710 - ENST00000250454.7@EAPP ENST00000250454.7 protein_coding 34539555,34536094,34533444,34529358,34524697,34515929 34539710,34536275,34533539,34529475,34524807,34516586 Gene ID= ENSG00000129518.8 TPM= 47.09 Transcript Type= protein_coding chr14 34561413 34630192 34561413 34630192 - transcript898.chr14.nic@SNX6 transcript898.chr14.nic protein_coding 34630111,34629907,34609638,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34561413 34630192,34629954,34609742,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175 Gene ID= ENSG00000129515.18 TPM= 6.95 Transcript Type= NA chr14 34561094 34630109 34561094 34630109 - ENST00000396526.7@SNX6 ENST00000396526.7 protein_coding 34629907,34609638,34608030,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34561094 34630109,34609742,34608140,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175 Gene ID= ENSG00000129515.18 TPM= 14.64 Transcript Type= protein_coding chr14 34562409 34630183 34562409 34630183 - ENST00000362031.8@SNX6 ENST00000362031.8 protein_coding 34630111,34629907,34609638,34608030,34605596,34603348,34597550,34593045,34586230,34581561,34575756,34567854,34567686,34562409 34630183,34629954,34609742,34608140,34605717,34603471,34597645,34593150,34586305,34581600,34575842,34568013,34567771,34563175 Gene ID= ENSG00000129515.18 TPM= 110.63 Transcript Type= protein_coding chr14 34752737 34875647 34752737 34875647 - ENST00000360310.5@BAZ1A ENST00000360310.5 protein_coding 34875138,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800224,34795670,34794749,34792775,34786126,34785777,34783762,34783119,34780186,34775919,34774327,34773572,34771511,34765021,34764707,34761757,34758704,34754827,34752737 34875647,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390,34795765,34794887,34792921,34786221,34786001,34783927,34783232,34780310,34776515,34774490,34773726,34771659,34765268,34764933,34762223,34758846,34754914,34753704 Gene ID= ENSG00000198604.10 TPM= 3.17 Transcript Type= protein_coding chr14 34752731 34875647 34752731 34875647 - ENST00000358716.8@BAZ1A ENST00000358716.8 protein_coding 34875138,34874492,34862044,34826013,34810935,34807451,34802854,34801094,34800224,34795670,34794749,34792775,34785777,34783762,34783119,34780186,34775919,34774327,34773572,34771511,34765021,34764707,34761757,34758704,34754827,34752731 34875647,34874662,34862322,34826156,34811036,34807538,34802988,34801193,34800390,34795765,34794887,34792921,34786001,34783927,34783232,34780310,34776515,34774490,34773726,34771659,34765268,34764933,34762223,34758846,34754914,34753704 Gene ID= ENSG00000198604.10 TPM= 2.26 Transcript Type= protein_coding chr14 35046454 35083377 35046454 35083377 + transcript928.chr14.nnic@FAM177A1 transcript928.chr14.nnic protein_coding 35046454,35053278,35078927,35081022 35046628,35053451,35079024,35083377 Gene ID= ENSG00000151327.12 TPM= 3.17 Transcript Type= NA chr14 35046247 35050361 35046247 35050361 + transcript929.chr14.nic@FAM177A1 transcript929.chr14.nic protein_coding 35046247,35046505,35050033 35046406,35046628,35050361 Gene ID= ENSG00000151327.12 TPM= 2.72 Transcript Type= NA chr14 35046403 35083383 35046403 35083383 + ENST00000280987.8@FAM177A1 ENST00000280987.8 protein_coding 35046403,35053278,35077150,35078927,35081022 35046628,35053451,35077216,35079024,35083383 Gene ID= ENSG00000151327.12 TPM= 33.96 Transcript Type= protein_coding chr14 35046453 35050396 35046453 35050396 + ENST00000554052.2@FAM177A1 ENST00000554052.2 protein_coding 35046453,35050033 35046628,35050396 Gene ID= ENSG00000151327.12 TPM= 12.68 Transcript Type= protein_coding chr14 35085470 35122691 35085470 35122691 - transcript932.chr14.nic@PPP2R3C transcript932.chr14.nic protein_coding 35122222,35121902,35116610,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085470 35122691,35122101,35116737,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778 Gene ID= ENSG00000092020.10 TPM= 6.34 Transcript Type= NA chr14 35085467 35122313 35085467 35122313 - ENST00000261475.9@PPP2R3C ENST00000261475.9 protein_coding 35121902,35116610,35110525,35109819,35108139,35107304,35099252,35096709,35096558,35095048,35091070,35087951,35085467 35122313,35116737,35110629,35109931,35108236,35107374,35099384,35096764,35096633,35095184,35091207,35088010,35085778 Gene ID= ENSG00000092020.10 TPM= 14.49 Transcript Type= protein_coding chr14 35292357 35317474 35292357 35317474 + ENST00000261479.8@PSMA6 ENST00000261479.8 protein_coding 35292357,35307994,35308914,35310740,35312881,35314361,35317249 35292552,35308088,35308995,35310895,35313059,35314455,35317474 Gene ID= ENSG00000100902.10 TPM= 138.1 Transcript Type= protein_coding chr14 35401511 35404746 35401511 35404746 - ENST00000216797.9@NFKBIA ENST00000216797.9 protein_coding 35404418,35403690,35403150,35402771,35402394,35401511 35404746,35403798,35403360,35402859,35402663,35402060 Gene ID= ENSG00000100906.10 TPM= 241.78 Transcript Type= protein_coding chr14 35401540 35404746 35401540 35404746 - ENST00000557140.5@NFKBIA ENST00000557140.5 protein_coding 35404418,35403690,35403150,35402771,35402394,35401540 35404746,35403798,35403360,35402859,35402534,35402060 Gene ID= ENSG00000100906.10 TPM= 1.81 Transcript Type= protein_coding chr14 35539069 35809214 35539069 35809214 - ENST00000637992.1@RALGAPA1 ENST00000637992.1 protein_coding 35808730,35775635,35775006,35770942,35762710,35760829,35756793,35752024,35750482,35748585,35742368,35738513,35728362,35725024,35723027,35721688,35688459,35686542,35684929,35683809,35677950,35674516,35674180,35672867,35671389,35664642,35659138,35655807,35654367,35651805,35635464,35634574,35627090,35625361,35605586,35595634,35572560,35570617,35549110,35548508,35539069 35809214,35775745,35775055,35770999,35762753,35761006,35756908,35752162,35750690,35748824,35742565,35738650,35728510,35725153,35723264,35721849,35690003,35686666,35685145,35683985,35678102,35674709,35674278,35673022,35671517,35664767,35659196,35655915,35654477,35651873,35635598,35634757,35627951,35625432,35605709,35595789,35572718,35570744,35549234,35548538,35539690 Gene ID= ENSG00000174373.16 TPM= 2.72 Transcript Type= protein_coding chr14 35826905 35871962 35826905 35871962 + transcript964.chr14.nnic@BRMS1L transcript964.chr14.nnic protein_coding 35826905,35831410,35832978,35834844,35862590,35863870,35864935,35865722,35867906,35870360 35827039,35831500,35833105,35834923,35862686,35863953,35864999,35865761,35868032,35871962 Gene ID= ENSG00000100916.13 TPM= 1.81 Transcript Type= NA chr14 35826318 35871963 35826318 35871963 + ENST00000216807.11@BRMS1L ENST00000216807.11 protein_coding 35826318,35831410,35832978,35834844,35862590,35863870,35864935,35865722,35867906,35870360 35826658,35831500,35833105,35834923,35862686,35863953,35864999,35865761,35868032,35871963 Gene ID= ENSG00000100916.13 TPM= 23.54 Transcript Type= protein_coding chr14 36298558 36320676 36298558 36320676 - ENST00000416007.8@MBIP ENST00000416007.8 protein_coding 36320460,36316693,36314691,36314512,36311959,36311573,36308092,36300785,36298558 36320676,36316812,36314915,36314608,36312024,36311725,36308189,36300823,36299190 Gene ID= ENSG00000151332.18 TPM= 23.54 Transcript Type= protein_coding chr14 36298568 36320627 36298568 36320627 - ENST00000318473.11@MBIP ENST00000318473.11 protein_coding 36320460,36316693,36314691,36314512,36311959,36311573,36308092,36300785,36298568 36320627,36316812,36314915,36314608,36312024,36311725,36308189,36300823,36299187 Gene ID= ENSG00000151332.18 TPM= 1.81 Transcript Type= protein_coding chr14 36298590 36320607 36298590 36320607 - ENST00000359527.11@MBIP ENST00000359527.11 protein_coding 36320460,36316693,36314691,36314512,36311959,36311573,36300785,36298590 36320607,36316812,36314915,36314608,36312024,36311725,36300823,36299190 Gene ID= ENSG00000151332.18 TPM= 1.81 Transcript Type= protein_coding chr14 37197967 37522831 37197967 37522831 + transcript976.chr14.nnic@MIPOL1 transcript976.chr14.nnic protein_coding 37197967,37247103,37247829,37266938,37268658,37270420,37285318,37308056,37308349,37369517,37422855,37499908,37520958 37198104,37247240,37247907,37267169,37268793,37270525,37285447,37308089,37308519,37369624,37422949,37500138,37522831 Gene ID= ENSG00000151338.18 TPM= 1.81 Transcript Type= NA chr14 37197913 37547661 37197913 37547661 + transcript977.chr14.nic@MIPOL1 transcript977.chr14.nic protein_coding 37197913,37247103,37247829,37266938,37268658,37270420,37285318,37308056,37308349,37369517,37422855,37499908,37546905 37198104,37247240,37247907,37267169,37268793,37270525,37285447,37308089,37308519,37369624,37422949,37500138,37547661 Gene ID= ENSG00000151338.18 TPM= 2.72 Transcript Type= NA chr14 39031904 39103232 39031904 39103232 - transcript978.chr14.nnic@SEC23A transcript978.chr14.nnic protein_coding 39103032,39095898,39093187,39092541,39091477,39086929,39085762,39075935,39074415,39067173,39064913,39063324,39061765,39055143,39048652,39047367,39045163,39042786,39040732,39039031,39031904 39103232,39096139,39093244,39092627,39091713,39087008,39085906,39076093,39074530,39067296,39064993,39063413,39061871,39055296,39048729,39047438,39045324,39042872,39040887,39039096,39033328 Gene ID= ENSG00000100934.14 TPM= 5.43 Transcript Type= NA chr14 39114223 39136973 39114223 39136973 + ENST00000308317.10@GEMIN2 ENST00000308317.10 protein_coding 39114223,39114829,39117999,39118540,39122430,39124992,39128280,39131958,39133661,39136440 39114475,39114913,39118088,39118599,39122543,39125036,39128348,39132068,39133719,39136973 Gene ID= ENSG00000092208.16 TPM= 2.72 Transcript Type= protein_coding chr14 39147813 39170390 39147813 39170390 - transcript994.chr14.nic@TRAPPC6B transcript994.chr14.nic protein_coding 39170015,39159450,39158285,39151746,39147813 39170390,39159550,39158402,39151839,39150381 Gene ID= ENSG00000182400.14 TPM= 1.81 Transcript Type= NA chr14 39147812 39170393 39147812 39170393 - ENST00000347691.9@TRAPPC6B ENST00000347691.9 protein_coding 39170015,39159483,39158285,39151746,39147812 39170393,39159550,39158402,39151839,39150381 Gene ID= ENSG00000182400.14 TPM= 4.53 Transcript Type= protein_coding chr14 39147812 39170322 39147812 39170322 - ENST00000330149.9@TRAPPC6B ENST00000330149.9 protein_coding 39170015,39159483,39158285,39154211,39151746,39147812 39170322,39159550,39158402,39154294,39151839,39150381 Gene ID= ENSG00000182400.14 TPM= 16.3 Transcript Type= protein_coding chr14 39265270 39350693 39265270 39350693 + transcript1003.chr14.nic@CTAGE5 transcript1003.chr14.nic protein_coding 39265270,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39265421,39276955,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350693 Gene ID= ENSG00000150527.17 TPM= 3.7 Transcript Type= NA chr14 39265270 39350693 39265270 39350693 + transcript1005.chr14.nic@CTAGE5 transcript1005.chr14.nic protein_coding 39265270,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39265421,39277065,39279358,39279537,39291111,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350693 Gene ID= ENSG00000150527.17 TPM= 1.89 Transcript Type= NA chr14 39267086 39350693 39267086 39350693 + transcript1007.chr14.nic@CTAGE5 transcript1007.chr14.nic protein_coding 39267086,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39267522,39276955,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350693 Gene ID= ENSG00000150527.17 TPM= 1.89 Transcript Type= NA chr14 39266850 39350693 39266850 39350693 + transcript1011.chr14.nic@CTAGE5 transcript1011.chr14.nic protein_coding 39266850,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39267189,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350693 Gene ID= ENSG00000150527.17 TPM= 1.89 Transcript Type= NA chr14 39266878 39350421 39266878 39350421 + transcript1012.chr14.nnic@CTAGE5 transcript1012.chr14.nnic protein_coding 39266878,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39267039,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350421 Gene ID= ENSG00000150527.17 TPM= 1.89 Transcript Type= NA chr14 39265270 39350641 39265270 39350641 + transcript1013.chr14.nic@CTAGE5 transcript1013.chr14.nic protein_coding 39265270,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098 39265421,39276955,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350641 Gene ID= ENSG00000150527.17 TPM= 1.89 Transcript Type= NA chr14 39265270 39350693 39265270 39350693 + transcript1016.chr14.nic@CTAGE5 transcript1016.chr14.nic protein_coding 39265270,39276934,39279337,39279449,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39265421,39277065,39279358,39279537,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350693 Gene ID= ENSG00000150527.17 TPM= 3.7 Transcript Type= NA chr14 39267086 39304008 39267086 39304008 + transcript1023.chr14.nnic@CTAGE5 transcript1023.chr14.nnic protein_coding 39267086,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478 39267522,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302285,39304008 Gene ID= ENSG00000150527.17 TPM= 1.81 Transcript Type= NA chr14 39265292 39350694 39265292 39350694 + ENST00000341749.7@CTAGE5 ENST00000341749.7 protein_coding 39265292,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39320928,39326864,39345904,39347713,39348743,39350098 39265421,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39321056,39327022,39346026,39347771,39348977,39350694 Gene ID= ENSG00000150527.17 TPM= 10.04 Transcript Type= protein_coding chr14 39267414 39350694 39267414 39350694 + ENST00000348007.7@CTAGE5 ENST00000348007.7 protein_coding 39267414,39276934,39279337,39279449,39291019,39293271,39294000,39294925,39299864,39302129,39303478,39304291,39308449,39313340,39314739,39315683,39317944,39319209,39326864,39345904,39347713,39348743,39350098 39267522,39277065,39279358,39279537,39291096,39293381,39294071,39295029,39299986,39302249,39303524,39304381,39308587,39313441,39314799,39315718,39318011,39319291,39327022,39346026,39347771,39348977,39350694 Gene ID= ENSG00000150527.17 TPM= 3.7 Transcript Type= protein_coding chr14 39397669 39432500 39397669 39432500 - ENST00000298097.7@FBXO33 ENST00000298097.7 protein_coding 39431564,39402401,39401176,39397669 39432500,39402511,39401861,39399787 Gene ID= ENSG00000165355.7 TPM= 27.17 Transcript Type= protein_coding chr14 44897295 44907257 44897295 44907257 + ENST00000325192.7@C14orf28 ENST00000325192.7 protein_coding 44897295,44900435,44903207,44904395,44905367 44897568,44900959,44903296,44904529,44907257 Gene ID= ENSG00000179476.7 TPM= 9.06 Transcript Type= protein_coding chr14 44928830 44961944 44928830 44961944 - transcript1033.chr14.nic@KLHL28 transcript1033.chr14.nic protein_coding 44961597,44945030,44934115,44931333,44928830 44961944,44945928,44934558,44931541,44929191 Gene ID= ENSG00000179454.13 TPM= 1.81 Transcript Type= NA chr14 44933541 44961970 44933541 44961970 - transcript1035.chr14.nic@KLHL28 transcript1035.chr14.nic protein_coding 44961846,44945030,44933541 44961970,44945928,44934558 Gene ID= ENSG00000179454.13 TPM= 1.81 Transcript Type= NA chr14 44962208 45074431 44962208 45074431 + ENST00000361577.7@TOGARAM1 ENST00000361577.7 protein_coding 44962208,44995746,44999363,45004061,45006008,45008913,45011975,45025783,45027299,45028176,45032223,45043686,45044635,45052436,45054431,45066578,45068424,45071712,45073296 44964467,44995902,44999497,45004366,45006267,45009145,45012075,45025872,45027474,45028329,45032376,45043791,45044870,45052562,45054549,45066767,45068643,45071798,45074431 Gene ID= ENSG00000198718.12 TPM= 1.36 Transcript Type= protein_coding chr14 44962239 45074431 44962239 45074431 + ENST00000361462.6@TOGARAM1 ENST00000361462.6 protein_coding 44962239,44995746,44999363,45004061,45006008,45008913,45011975,45025783,45027299,45028176,45032223,45043686,45044635,45046545,45052436,45054431,45066578,45068424,45071712,45073296 44964467,44995902,44999497,45004366,45006267,45009145,45012075,45025872,45027474,45028329,45032376,45043791,45044870,45046703,45052562,45054549,45066767,45068643,45071798,45074431 Gene ID= ENSG00000198718.12 TPM= 9.51 Transcript Type= protein_coding chr14 45084095 45115599 45084095 45115599 + transcript1043.chr14.nic@PRPF39 transcript1043.chr14.nic protein_coding 45084095,45095221,45096103,45096424,45096596,45096887,45102529,45107451,45108415,45109616,45109894,45110094,45110549,45112318,45114183,45114494,45114857 45084249,45095563,45096228,45096492,45096758,45097005,45102696,45107616,45108522,45109780,45109993,45110220,45110817,45112502,45114257,45114614,45115599 Gene ID= ENSG00000185246.17 TPM= 1.81 Transcript Type= NA chr14 45084095 45115599 45084095 45115599 + transcript1046.chr14.nic@PRPF39 transcript1046.chr14.nic protein_coding 45084095,45095221,45096103,45096424,45096596,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857 45084249,45095563,45096228,45096492,45096758,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115599 Gene ID= ENSG00000185246.17 TPM= 3.62 Transcript Type= NA chr14 45084099 45115601 45084099 45115601 + ENST00000355765.10@PRPF39 ENST00000355765.10 protein_coding 45084099,45095221,45096103,45096887,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857 45084249,45095563,45096228,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601 Gene ID= ENSG00000185246.17 TPM= 8.15 Transcript Type= protein_coding chr14 45084095 45115599 45084095 45115599 + transcript1058.chr14.nic@PRPF39 transcript1058.chr14.nic protein_coding 45084095,45095221,45096103,45102529,45107451,45108415,45109616,45110549,45112318,45114183,45114494,45114857 45084249,45095563,45097005,45102696,45107616,45108522,45110220,45110817,45112502,45114257,45114614,45115599 Gene ID= ENSG00000185246.17 TPM= 2.72 Transcript Type= NA chr14 45084118 45115601 45084118 45115601 + ENST00000477626.5@PRPF39 ENST00000477626.5 protein_coding 45084118,45095221,45096103,45102529,45107451,45108415,45109616,45110094,45110549,45112318,45114183,45114494,45114857 45084249,45095563,45097005,45102696,45107616,45108522,45109780,45110220,45110817,45112502,45114257,45114614,45115601 Gene ID= ENSG00000185246.17 TPM= 1.81 Transcript Type= retained_intron chr14 45115892 45134479 45115892 45134479 - transcript1062.chr14.nnic@FKBP3 transcript1062.chr14.nnic protein_coding 45132632,45130699,45129794,45121485,45120887,45118028,45115892 45134479,45131438,45129901,45121620,45120954,45118125,45116252 Gene ID= ENSG00000100442.10 TPM= 3.62 Transcript Type= NA chr14 45203190 45253402 45203190 45253402 - ENST00000310806.8@MIS18BP1 ENST00000310806.8 protein_coding 45253035,45246743,45242761,45242034,45237648,45235814,45232733,45231141,45227663,45226743,45223918,45218282,45217019,45210380,45206083,45204399,45203190 45253402,45247377,45242874,45242518,45237721,45235944,45232820,45231298,45227814,45226836,45224746,45218454,45217179,45210528,45206170,45204453,45204212 Gene ID= ENSG00000129534.13 TPM= 4.53 Transcript Type= protein_coding chr14 49583572 49586376 49583572 49586376 - ENST00000245458.10@RPS29 ENST00000245458.10 protein_coding 49586285,49585950,49583572 49586376,49586049,49583675 Gene ID= ENSG00000213741.9 TPM= 421.98 Transcript Type= protein_coding chr14 49598697 49614672 49598697 49614672 + ENST00000298288.10@LRR1 ENST00000298288.10 protein_coding 49598697,49602370,49607400,49614256 49599203,49602468,49608121,49614672 Gene ID= ENSG00000165501.16 TPM= 3.02 Transcript Type= protein_coding chr14 49598975 49614672 49598975 49614672 + transcript1073.chr14.nnic@LRR1 transcript1073.chr14.nnic protein_coding 49598975,49602370,49607400,49614256 49600697,49602468,49608121,49614672 Gene ID= ENSG00000165501.16 TPM= 2.11 Transcript Type= NA chr14 49599786 49614672 49599786 49614672 + transcript1074.chr14.nnic@LRR1 transcript1074.chr14.nnic protein_coding 49599786,49602370,49607400,49614256 49600263,49602468,49608121,49614672 Gene ID= ENSG00000165501.16 TPM= 2.11 Transcript Type= NA chr14 49598761 49614670 49598761 49614670 + ENST00000318317.8@LRR1 ENST00000318317.8 protein_coding 49598761,49602370,49614256 49599203,49602468,49614670 Gene ID= ENSG00000165501.16 TPM= 3.62 Transcript Type= protein_coding chr14 49620815 49623480 49620815 49623480 - ENST00000555043.1@AL139099.2 ENST00000555043.1 antisense_RNA 49621246,49620815 49623480,49621048 Gene ID= ENSG00000258377.1 TPM= 10.87 Transcript Type= antisense_RNA chr14 49625174 49635230 49625174 49635230 - ENST00000406043.3@DNAAF2 ENST00000406043.3 protein_coding 49633287,49625174 49635230,49626048 Gene ID= ENSG00000165506.14 TPM= 10.87 Transcript Type= protein_coding chr14 49693105 49753152 49693105 49753152 + ENST00000359332.6@KLHDC1 ENST00000359332.6 protein_coding 49693105,49709159,49709709,49710263,49723874,49725686,49728926,49729490,49732704,49734589,49740098,49743753,49751586 49693290,49709229,49709826,49710381,49723952,49725769,49729009,49729548,49732816,49734661,49740182,49743805,49753152 Gene ID= ENSG00000197776.7 TPM= 5.43 Transcript Type= protein_coding chr14 49768151 49786826 49768151 49786826 + transcript1096.chr14.nnic@KLHDC2 transcript1096.chr14.nnic protein_coding 49768151,49771594,49774561,49777839,49778178,49778411,49779595,49779748,49780213,49780703,49782370,49782542,49785580 49768621,49771673,49774678,49777954,49778259,49778494,49779675,49779806,49780322,49780775,49782457,49782594,49786826 Gene ID= ENSG00000165516.10 TPM= 3.62 Transcript Type= NA chr14 49768168 49783115 49768168 49783115 + ENST00000555443.5@KLHDC2 ENST00000555443.5 protein_coding 49768168,49771594,49774561,49777839,49778178,49778411,49779595,49780213,49780703,49782370,49782542,49782830 49768621,49771673,49774678,49777954,49778259,49778494,49779806,49780322,49780775,49782457,49782594,49783115 Gene ID= ENSG00000165516.10 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr14 49782083 49853203 49782083 49853203 - ENST00000298310.9@NEMF ENST00000298310.9 protein_coding 49852695,49851807,49851563,49846140,49840718,49838139,49834363,49833423,49832207,49832051,49831299,49829349,49829054,49828616,49828291,49825867,49814754,49813988,49806021,49803237,49802669,49802453,49800420,49799636,49799475,49795791,49789496,49789146,49786718,49785220,49785092,49784925,49782083 49853203,49851875,49851665,49846265,49840866,49838206,49834449,49833496,49832277,49832126,49831361,49829426,49829262,49828807,49828354,49825955,49814857,49814050,49806133,49803294,49802727,49802573,49800696,49799678,49799524,49795944,49789573,49789343,49786750,49785320,49785135,49785004,49784713 Gene ID= ENSG00000165525.17 TPM= 25.36 Transcript Type= protein_coding chr14 49893092 49897054 49893092 49897054 + ENST00000298316.6@ARF6 ENST00000298316.6 protein_coding 49893092,49893256 49893157,49897054 Gene ID= ENSG00000165527.6 TPM= 240.88 Transcript Type= protein_coding chr14 50108633 50116557 50108633 50116557 - ENST00000395860.6@VCPKMT ENST00000395860.6 protein_coding 50116287,50116069,50115839,50114285,50112615,50108633 50116557,50116179,50115911,50114404,50112719,50109713 Gene ID= ENSG00000100483.13 TPM= 5.43 Transcript Type= protein_coding chr14 50108633 50116600 50108633 50116600 - ENST00000491402.5@VCPKMT ENST00000491402.5 protein_coding 50116287,50116080,50115839,50114285,50112615,50108633 50116600,50116179,50115911,50114404,50112719,50109713 Gene ID= ENSG00000100483.13 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr14 50155897 50231925 50155897 50231925 - transcript1117.chr14.nic@SOS2 transcript1117.chr14.nic protein_coding 50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50155897 50231925,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121 Gene ID= ENSG00000100485.11 TPM= 6.34 Transcript Type= NA chr14 50117120 50231558 50117120 50231558 - ENST00000216373.9@SOS2 ENST00000216373.9 protein_coding 50231197,50204284,50200953,50199691,50188497,50182463,50180572,50174454,50161482,50159431,50158565,50156999,50153070,50150008,50145477,50145170,50139942,50138612,50134123,50130501,50129961,50120275,50117120 50231558,50204409,50201084,50199855,50188700,50182606,50180682,50174552,50161609,50160086,50158646,50157121,50153173,50150230,50145596,50145332,50140059,50138784,50134239,50130762,50130002,50120384,50118853 Gene ID= ENSG00000100485.11 TPM= 4.53 Transcript Type= protein_coding chr14 50312329 50322894 50312329 50322894 + transcript1122.chr14.nnic@ATP5S transcript1122.chr14.nnic protein_coding 50312329,50314591,50321483,50322511 50312389,50314626,50321594,50322894 Gene ID= ENSG00000125375.14 TPM= 2.72 Transcript Type= NA chr14 50418525 50532609 50418525 50532609 - ENST00000013125.8@MAP4K5 ENST00000013125.8 protein_coding 50532400,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418525 50532609,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106 Gene ID= ENSG00000012983.11 TPM= 2.11 Transcript Type= protein_coding chr14 50418522 50532629 50418522 50532629 - transcript1129.chr14.nic@MAP4K5 transcript1129.chr14.nic protein_coding 50532448,50531942,50504800,50486104,50485578,50482361,50476259,50476128,50475077,50468651,50466583,50464052,50462665,50456516,50448774,50447414,50446079,50445041,50443939,50443729,50442732,50440362,50440013,50437894,50437476,50434962,50434394,50429192,50428662,50425907,50423121,50418522 50532629,50532158,50504857,50486194,50485642,50482416,50476306,50476170,50475149,50468782,50466645,50464133,50462781,50456594,50448832,50447481,50446121,50445194,50444036,50443770,50442816,50440441,50440073,50438011,50437534,50435065,50434571,50429260,50428754,50425977,50423176,50420106 Gene ID= ENSG00000012983.11 TPM= 6.64 Transcript Type= NA chr14 50560112 50633996 50560112 50633996 + transcript1135.chr14.nic@ATL1 transcript1135.chr14.nic protein_coding 50560112,50587831,50590941,50591535,50593846,50595576,50613259,50614373,50620599,50621843,50623177,50628031,50632229 50560299,50588078,50591075,50591639,50593896,50595632,50613351,50614511,50620726,50621899,50623248,50628462,50633996 Gene ID= ENSG00000198513.11 TPM= 9.06 Transcript Type= NA chr14 50633637 50668307 50633637 50668307 - transcript1137.chr14.nic@SAV1 transcript1137.chr14.nic protein_coding 50667874,50667382,50665179,50644744,50640750,50633637 50668307,50667500,50665619,50645014,50640893,50635384 Gene ID= ENSG00000151748.14 TPM= 2.72 Transcript Type= NA chr14 50633636 50668331 50633636 50668331 - ENST00000324679.4@SAV1 ENST00000324679.4 protein_coding 50667874,50665179,50644744,50640750,50633636 50668331,50665619,50645014,50640893,50635384 Gene ID= ENSG00000151748.14 TPM= 77.88 Transcript Type= protein_coding chr14 50725840 50831121 50725840 50831121 - ENST00000382041.7@NIN ENST00000382041.7 protein_coding 50831006,50830464,50821874,50806737,50792712,50778765,50776949,50772949,50772301,50771332,50770852,50770388,50766780,50766307,50763826,50761790,50759857,50756492,50754742,50754563,50752518,50747992,50744243,50743416,50741582,50739308,50738140,50735516,50729523,50725840 50831121,50830517,50822077,50806818,50792881,50778804,50777139,50773095,50772468,50771468,50770992,50770562,50766890,50766396,50763964,50761911,50760359,50758630,50754867,50754632,50752733,50748105,50744365,50743529,50741728,50739487,50738286,50735617,50729723,50726066 Gene ID= ENSG00000100503.23 TPM= 1.81 Transcript Type= protein_coding chr14 50905217 50944483 50905217 50944483 - transcript1153.chr14.nnic@PYGL transcript1153.chr14.nnic protein_coding 50944161,50937736,50935107,50931673,50923954,50920956,50920541,50916962,50916642,50915825,50915336,50914701,50913029,50912156,50911978,50911730,50909895,50908821,50908271,50905217 50944483,50937837,50935185,50931776,50924100,50921067,50920623,50917105,50916734,50915971,50915499,50914815,50913130,50912303,50912036,50911871,50910102,50908955,50908337,50905556 Gene ID= ENSG00000100504.16 TPM= 2.26 Transcript Type= NA chr14 50905221 50944736 50905221 50944736 - ENST00000216392.7@PYGL ENST00000216392.7 protein_coding 50944161,50937736,50935107,50931673,50923969,50920956,50920541,50916962,50916642,50915825,50915336,50914701,50913029,50912156,50911978,50911730,50909895,50908821,50908271,50905221 50944736,50937837,50935185,50931776,50924100,50921067,50920623,50917105,50916734,50915971,50915499,50914815,50913130,50912303,50912036,50911871,50910102,50908955,50908337,50905556 Gene ID= ENSG00000100504.16 TPM= 82.86 Transcript Type= protein_coding chr14 50975262 51096061 50975262 51096061 - ENST00000298355.7@TRIM9 ENST00000298355.7 protein_coding 51094118,51025265,51022835,51010384,51009080,51000683,50998050,50981800,50979387,50975262 51096061,51025360,51022957,51010494,51009233,51000840,50998188,50982103,50979549,50977353 Gene ID= ENSG00000100505.13 TPM= 2.72 Transcript Type= protein_coding chr14 51240168 51257546 51240168 51257546 + ENST00000457354.6@TMX1 ENST00000457354.6 protein_coding 51240168,51243856,51245313,51247092,51249326,51249468,51249693,51254341 51240444,51243971,51245358,51247220,51249371,51249569,51249765,51257546 Gene ID= ENSG00000139921.12 TPM= 83.31 Transcript Type= protein_coding chr14 51651429 51730725 51651429 51730725 + transcript1167.chr14.nnic@FRMD6 transcript1167.chr14.nnic protein_coding 51651429,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745 51651513,51689935,51698232,51701135,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730725 Gene ID= ENSG00000139926.15 TPM= 1.81 Transcript Type= NA chr14 51652118 51730725 51652118 51730725 + transcript1172.chr14.nic@FRMD6 transcript1172.chr14.nic protein_coding 51652118,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745 51652217,51689935,51698232,51701135,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730725 Gene ID= ENSG00000139926.15 TPM= 2.72 Transcript Type= NA chr14 51652359 51730725 51652359 51730725 + transcript1176.chr14.nnic@FRMD6 transcript1176.chr14.nnic protein_coding 51652359,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745 51652790,51689935,51698232,51701159,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730725 Gene ID= ENSG00000139926.15 TPM= 1.81 Transcript Type= NA chr14 51651858 51730727 51651858 51730727 + ENST00000395718.6@FRMD6 ENST00000395718.6 protein_coding 51651858,51689691,51698142,51701056,51702512,51704749,51708078,51711531,51712483,51715325,51720055,51721949,51725779,51727745 51651996,51689935,51698232,51701135,51702588,51704935,51708233,51711596,51712551,51715499,51720390,51722080,51725870,51730727 Gene ID= ENSG00000139926.15 TPM= 29.88 Transcript Type= protein_coding chr14 51989475 52010691 51989475 52010691 + ENST00000261700.7@C14orf166 ENST00000261700.7 protein_coding 51989475,51991317,51993723,51998494,51999708,52001798,52004194,52004362 51989700,51991441,51993822,51998580,51999796,52001866,52004242,52010691 Gene ID= ENSG00000087302.8 TPM= 86.03 Transcript Type= protein_coding chr14 52004803 52069061 52004803 52069061 - transcript1183.chr14.nic@NID2 transcript1183.chr14.nic protein_coding 52068767,52067858,52060124,52053579,52042782,52042105,52040651,52038747,52029547,52028722,52027201,52020059,52019061,52015054,52014287,52011554,52010876,52007810,52006537,52005737,52004803 52069061,52068163,52060356,52054321,52042931,52042350,52040851,52038977,52029690,52028850,52027344,52020178,52019294,52015275,52014456,52011683,52011047,52007967,52006660,52005849,52005496 Gene ID= ENSG00000087303.17 TPM= 6.79 Transcript Type= NA chr14 52004803 52069303 52004803 52069303 - transcript1184.chr14.nic@NID2 transcript1184.chr14.nic protein_coding 52068767,52067858,52060124,52054020,52053579,52042782,52042105,52040651,52038747,52029547,52028722,52020059,52019061,52015054,52014287,52011554,52010876,52007810,52006537,52005737,52004803 52069303,52068163,52060356,52054321,52053938,52042931,52042350,52040851,52038977,52029690,52028850,52020178,52019294,52015275,52014456,52011683,52011047,52007967,52006660,52005849,52005496 Gene ID= ENSG00000087303.17 TPM= 3.17 Transcript Type= NA chr14 52430590 52552506 52430590 52552506 - ENST00000281741.8@TXNDC16 ENST00000281741.8 protein_coding 52552316,52544264,52543398,52542371,52537599,52536719,52519172,52514880,52511240,52490839,52490391,52488363,52482822,52482230,52470512,52470037,52457090,52455324,52440564,52439204,52430590 52552506,52544371,52543630,52542453,52537672,52536793,52519293,52514970,52511390,52491005,52490451,52488486,52482965,52482289,52470680,52470173,52457174,52455462,52440724,52439394,52432587 Gene ID= ENSG00000087301.8 TPM= 2.72 Transcript Type= protein_coding chr14 52641890 52695904 52641890 52695904 - transcript1193.chr14.nnic@ERO1A transcript1193.chr14.nnic protein_coding 52695368,52683788,52682325,52678434,52671795,52671630,52667187,52666375,52663801,52661293,52658124,52657917,52653069,52652239,52646375,52646154,52641890 52695904,52683907,52682408,52678472,52671871,52671703,52667225,52666495,52663847,52661304,52658150,52658009,52653315,52652308,52646461,52646287,52643630 Gene ID= ENSG00000197930.12 TPM= 1.81 Transcript Type= NA chr14 52639916 52695705 52639916 52695705 - ENST00000395686.7@ERO1A ENST00000395686.7 protein_coding 52695368,52683788,52682325,52678434,52671795,52671630,52666375,52663801,52661293,52658124,52657917,52653069,52652239,52646375,52646154,52639916 52695705,52683907,52682408,52678472,52671871,52671703,52666495,52663847,52661304,52658150,52658009,52653315,52652308,52646461,52646287,52643630 Gene ID= ENSG00000197930.12 TPM= 27.17 Transcript Type= protein_coding chr14 52730180 52774941 52730180 52774941 + ENST00000442123.6@STYX ENST00000442123.6 protein_coding 52730180,52730459,52744852,52746426,52750683,52756551,52757319,52757743,52757874,52759682,52768840,52771033 52730210,52730531,52744884,52746479,52750780,52756611,52757355,52757782,52757924,52759754,52768933,52774941 Gene ID= ENSG00000198252.11 TPM= 3.62 Transcript Type= protein_coding chr14 52775194 52791601 52775194 52791601 - ENST00000216410.7@GNPNAT1 ENST00000216410.7 protein_coding 52791428,52784497,52783423,52781784,52780679,52775194 52791601,52784664,52783485,52781911,52780740,52778458 Gene ID= ENSG00000100522.8 TPM= 9.96 Transcript Type= protein_coding chr14 52857268 52951035 52857268 52951035 - ENST00000395631.6@FERMT2 ENST00000395631.6 protein_coding 52950828,52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857268 52951035,52950577,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550 Gene ID= ENSG00000073712.14 TPM= 4.23 Transcript Type= protein_coding chr14 52857269 52951122 52857269 52951122 - transcript1217.chr14.nic@FERMT2 transcript1217.chr14.nic protein_coding 52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857269 52951122,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550 Gene ID= ENSG00000073712.14 TPM= 5.13 Transcript Type= NA chr14 52857268 52951097 52857268 52951097 - ENST00000341590.7@FERMT2 ENST00000341590.7 protein_coding 52950921,52950412,52919123,52893293,52881244,52881036,52878582,52875223,52874177,52872799,52864747,52864401,52860341,52859573,52857268 52951097,52950577,52919356,52893427,52881469,52881138,52878689,52875357,52874226,52872923,52864853,52864622,52860465,52859714,52858550 Gene ID= ENSG00000073712.14 TPM= 25.06 Transcript Type= protein_coding chr14 53949736 53956811 53949736 53956811 - ENST00000559087.5@BMP4 ENST00000559087.5 protein_coding 53956759,53953276,53951853,53949736 53956811,53953400,53952229,53950888 Gene ID= ENSG00000125378.15 TPM= 3.92 Transcript Type= protein_coding chr14 53949736 53956811 53949736 53956811 - ENST00000245451.8@BMP4 ENST00000245451.8 protein_coding 53956550,53953276,53951853,53949736 53956811,53953400,53952229,53950888 Gene ID= ENSG00000125378.15 TPM= 4.83 Transcript Type= protein_coding chr14 53949741 53953455 53949741 53953455 - ENST00000558984.1@BMP4 ENST00000558984.1 protein_coding 53953276,53951853,53949741 53953455,53952229,53950888 Gene ID= ENSG00000125378.15 TPM= 5.73 Transcript Type= protein_coding chr14 54423560 54441431 54423560 54441431 - ENST00000216416.8@CNIH1 ENST00000216416.8 protein_coding 54441247,54436369,54432108,54430261,54423560 54441431,54436437,54432220,54430404,54427841 Gene ID= ENSG00000100528.11 TPM= 86.93 Transcript Type= protein_coding chr14 54474485 54489196 54474485 54489196 - ENST00000358056.7@GMFB ENST00000358056.7 protein_coding 54488925,54483671,54482153,54481409,54480874,54479786,54474485 54489196,54483767,54482202,54481458,54480956,54479859,54478159 Gene ID= ENSG00000197045.12 TPM= 65.2 Transcript Type= protein_coding chr14 54509907 54539481 54509907 54539481 + transcript1237.chr14.nnic@CGRRF1 transcript1237.chr14.nnic protein_coding 54509907,54515276,54522454,54530049,54530903,54537722,54538063 54510063,54515393,54522593,54530226,54531050,54537829,54539481 Gene ID= ENSG00000100532.11 TPM= 1.81 Transcript Type= NA chr14 55027248 55046708 55027248 55046708 + ENST00000555846.1@SOCS4 ENST00000555846.1 protein_coding 55027248,55031863,55042952 55027471,55031991,55046708 Gene ID= ENSG00000180008.8 TPM= 3.62 Transcript Type= protein_coding chr14 55027230 55049488 55027230 55049488 + ENST00000395472.2@SOCS4 ENST00000395472.2 protein_coding 55027230,55042952 55027471,55049488 Gene ID= ENSG00000180008.8 TPM= 1.81 Transcript Type= protein_coding chr14 55051631 55070192 55051631 55070192 + ENST00000395468.8@MAPK1IP1L ENST00000395468.8 protein_coding 55051631,55061680,55062618,55064616 55051803,55061701,55063325,55070192 Gene ID= ENSG00000168175.14 TPM= 128.59 Transcript Type= protein_coding chr14 55129251 55145412 55129251 55145412 + transcript1253.chr14.nnic@LGALS3 transcript1253.chr14.nnic protein_coding 55129251,55137370,55138045,55140275,55142584,55145095 55129300,55137391,55138368,55140363,55142749,55145412 Gene ID= ENSG00000131981.15 TPM= 3.92 Transcript Type= NA chr14 55129250 55145433 55129250 55145433 + transcript1256.chr14.nnic@LGALS3 transcript1256.chr14.nnic protein_coding 55129250,55137370,55138045,55140275,55142584,55145116 55129647,55137391,55138368,55140363,55142749,55145433 Gene ID= ENSG00000131981.15 TPM= 4.83 Transcript Type= NA chr14 55129044 55145403 55129044 55145403 + ENST00000254301.13@LGALS3 ENST00000254301.13 protein_coding 55129044,55137370,55138045,55140275,55142584,55145116 55129300,55137391,55138368,55140363,55142749,55145403 Gene ID= ENSG00000131981.15 TPM= 120.74 Transcript Type= protein_coding chr14 55271303 55353609 55271303 55353609 + ENST00000313833.4@FBXO34 ENST00000313833.4 protein_coding 55271303,55350381 55271537,55353609 Gene ID= ENSG00000178974.9 TPM= 28.98 Transcript Type= protein_coding chr14 55366392 55411858 55366392 55411858 - ENST00000247178.5@ATG14 ENST00000247178.5 protein_coding 55411602,55397372,55395940,55390911,55385859,55381962,55380573,55377984,55377819,55366392 55411858,55397434,55395982,55390992,55386096,55382191,55380690,55378074,55377904,55369925 Gene ID= ENSG00000126775.8 TPM= 6.34 Transcript Type= protein_coding chr14 55580202 55684583 55580202 55684583 + transcript1269.chr14.nic@KTN1 transcript1269.chr14.nic protein_coding 55580202,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099 55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684583 Gene ID= ENSG00000126777.17 TPM= 12.65 Transcript Type= NA chr14 55580202 55684583 55580202 55684583 + transcript1270.chr14.nic@KTN1 transcript1270.chr14.nic protein_coding 55580202,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099 55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684583 Gene ID= ENSG00000126777.17 TPM= 12.65 Transcript Type= NA chr14 55580202 55684583 55580202 55684583 + transcript1276.chr14.nic@KTN1 transcript1276.chr14.nic protein_coding 55580202,55601757,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099 55580354,55601880,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684583 Gene ID= ENSG00000126777.17 TPM= 23.06 Transcript Type= NA chr14 55580202 55684583 55580202 55684583 + transcript1278.chr14.nic@KTN1 transcript1278.chr14.nic protein_coding 55580202,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099 55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684583 Gene ID= ENSG00000126777.17 TPM= 39.59 Transcript Type= NA chr14 55580202 55684583 55580202 55684583 + transcript1279.chr14.nic@KTN1 transcript1279.chr14.nic protein_coding 55580202,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099 55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684583 Gene ID= ENSG00000126777.17 TPM= 26.01 Transcript Type= NA chr14 55580315 55684579 55580315 55684579 + ENST00000438792.6@KTN1 ENST00000438792.6 protein_coding 55580315,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55667241,55670729,55671566,55671785,55672630,55672929,55675835,55678352,55679565,55684099 55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55667330,55670809,55671655,55671877,55672701,55673012,55675918,55678444,55679685,55684579 Gene ID= ENSG00000126777.17 TPM= 6.54 Transcript Type= protein_coding chr14 55580317 55684579 55580317 55684579 + ENST00000395314.7@KTN1 ENST00000395314.7 protein_coding 55580317,55612019,55616517,55617964,55619182,55627912,55629957,55633235,55634526,55636449,55637198,55637779,55639185,55639913,55640374,55640933,55641127,55641692,55646973,55648025,55648802,55649776,55650328,55650569,55651890,55652850,55653017,55653559,55656042,55658546,55659666,55661522,55663955,55667241,55670729,55671566,55671785,55672630,55672929,55673172,55675835,55678352,55679565,55684099 55580354,55612571,55616654,55618134,55619312,55628028,55630097,55633341,55634658,55636536,55637364,55637847,55639222,55640003,55640442,55640970,55641208,55641760,55647007,55648115,55648870,55649813,55650418,55650637,55651927,55652940,55653085,55653596,55656132,55658614,55659703,55661612,55664041,55667330,55670809,55671655,55671877,55672701,55673012,55673255,55675918,55678444,55679685,55684579 Gene ID= ENSG00000126777.17 TPM= 3.82 Transcript Type= protein_coding chr14 56579780 56649513 56579780 56649513 + transcript1306.chr14.nic@TMEM260 transcript1306.chr14.nic protein_coding 56579780,56585001,56585761,56603815,56605570,56609106,56612245,56615944,56617183,56618594,56625382,56632995,56634899,56636508,56647243 56580074,56585032,56585912,56603992,56605683,56609285,56612285,56616027,56617297,56618763,56625530,56633171,56634952,56636598,56649513 Gene ID= ENSG00000070269.13 TPM= 1.81 Transcript Type= NA chr14 56579793 56649515 56579793 56649515 + ENST00000261556.10@TMEM260 ENST00000261556.10 protein_coding 56579793,56585001,56585761,56603815,56605570,56609106,56612245,56615944,56617183,56618594,56621531,56625382,56632995,56634899,56636508,56647243 56580074,56585032,56585912,56603992,56605683,56609285,56612285,56616027,56617297,56618763,56621702,56625530,56633171,56634952,56636598,56649515 Gene ID= ENSG00000070269.13 TPM= 19.02 Transcript Type= protein_coding chr14 57200507 57269008 57200507 57269008 - ENST00000621441.4@EXOC5 ENST00000621441.4 protein_coding 57268622,57247618,57246711,57244165,57239595,57237338,57235711,57233988,57233743,57232667,57231506,57229734,57222308,57219322,57217982,57209953,57209567,57200507 57269008,57247712,57246858,57244359,57239659,57237366,57235820,57234032,57233883,57232749,57231715,57229881,57222416,57219442,57218068,57210061,57209782,57208797 Gene ID= ENSG00000070367.15 TPM= 56.14 Transcript Type= protein_coding chr14 57206593 57268676 57206593 57268676 - transcript1309.chr14.nnic@EXOC5 transcript1309.chr14.nnic protein_coding 57268508,57247618,57246711,57244165,57239595,57237338,57235711,57233988,57233743,57232667,57231506,57229734,57222308,57219322,57217982,57209953,57209567,57206593 57268676,57247712,57246858,57244359,57239659,57237366,57235820,57234032,57233883,57232749,57231715,57229881,57222416,57219442,57218068,57210061,57209782,57208797 Gene ID= ENSG00000070367.15 TPM= 2.72 Transcript Type= NA chr14 57268954 57290078 57268954 57290078 + transcript1313.chr14.nnic@AP5M1 transcript1313.chr14.nnic protein_coding 57268954,57274244,57280195,57282089,57282934,57283112,57286223,57288802 57269388,57274817,57280422,57282228,57283019,57283230,57286319,57290078 Gene ID= ENSG00000053770.11 TPM= 2.72 Transcript Type= NA chr14 57390805 57412826 57390805 57412826 + transcript1320.chr14.nic@NAA30 transcript1320.chr14.nic protein_coding 57390805,57396752,57399828,57409379 57391728,57396875,57399883,57412826 Gene ID= ENSG00000139977.13 TPM= 8.15 Transcript Type= NA chr14 58000761 58152213 58000761 58152213 - ENST00000267485.7@C14orf37 ENST00000267485.7 protein_coding 58152075,58137990,58133090,58131512,58096724,58012119,58005048,58000761 58152213,58139414,58133341,58131721,58096981,58012150,58005182,58004804 Gene ID= ENSG00000139971.15 TPM= 12.68 Transcript Type= protein_coding chr14 58200133 58234801 58200133 58234801 + transcript1331.chr14.nnic@ACTR10 transcript1331.chr14.nnic protein_coding 58200133,58202855,58207936,58208999,58211292,58213631,58215205,58223622,58223783,58230399,58232066,58234370 58200294,58202927,58208018,58209107,58211399,58213698,58215284,58223701,58223856,58230480,58232267,58234801 Gene ID= ENSG00000131966.13 TPM= 4.53 Transcript Type= NA chr14 58200138 58235636 58200138 58235636 + ENST00000254286.8@ACTR10 ENST00000254286.8 protein_coding 58200138,58202855,58207936,58208999,58211292,58213631,58215205,58219694,58223622,58223783,58230399,58232066,58234370 58200294,58202927,58208018,58209107,58211399,58213698,58215284,58219729,58223701,58223856,58230480,58232267,58235636 Gene ID= ENSG00000131966.13 TPM= 119.53 Transcript Type= protein_coding chr14 58244831 58272007 58244831 58272007 + ENST00000216455.8@PSMA3 ENST00000216455.8 protein_coding 58244831,58247750,58252119,58257745,58257925,58260948,58263705,58267474,58270418,58270934,58271851 58244941,58247832,58252242,58257846,58257998,58261020,58263770,58267520,58270485,58270998,58272007 Gene ID= ENSG00000100567.12 TPM= 95.08 Transcript Type= protein_coding chr14 58265366 58298138 58265366 58298138 - transcript1342.chr14.nnic@PSMA3-AS1 transcript1342.chr14.nnic antisense_RNA 58297955,58291635,58274097,58273979,58265366 58298138,58291707,58274135,58274010,58267393 Gene ID= ENSG00000257621.7 TPM= 3.62 Transcript Type= NA chr14 58298385 58373733 58298385 58373733 + ENST00000355431.7@ARID4A ENST00000355431.7 protein_coding 58298385,58299798,58301580,58304944,58306022,58318542,58318711,58323485,58328237,58329528,58330003,58344695,58346411,58347020,58347647,58351073,58353658,58359132,58360901,58364170,58365518,58366024,58366883,58371886 58298700,58299860,58301690,58305009,58306112,58318621,58318805,58323617,58328316,58329604,58330169,58344767,58346505,58347117,58347878,58351323,58353855,58359216,58361042,58365300,58365622,58366230,58367029,58373733 Gene ID= ENSG00000032219.18 TPM= 2.72 Transcript Type= protein_coding chr14 58407468 58427189 58407468 58427189 - transcript1357.chr14.nic@TIMM9 transcript1357.chr14.nic protein_coding 58427054,58424008,58411907,58410843,58407468 58427189,58424095,58411971,58410938,58409168 Gene ID= ENSG00000100575.13 TPM= 10.87 Transcript Type= NA chr14 58638056 58648321 58638056 58648321 + ENST00000395153.7@DACT1 ENST00000395153.7 protein_coding 58638056,58640736,58641592,58645369 58638547,58640868,58641747,58648321 Gene ID= ENSG00000165617.14 TPM= 2.72 Transcript Type= protein_coding chr14 59188680 59369753 59188680 59369753 + ENST00000360909.7@DAAM1 ENST00000360909.7 protein_coding 59188680,59263441,59291217,59315280,59320490,59322892,59324128,59324351,59325664,59325960,59326510,59326933,59330501,59331209,59331813,59340074,59347539,59352526,59353876,59355165,59359397,59360802,59363651,59367429,59368650 59188768,59263660,59291306,59315351,59320584,59323225,59324238,59324454,59325730,59326077,59326648,59326991,59330688,59331508,59331920,59340180,59347623,59352632,59353964,59355333,59359504,59360862,59363782,59367599,59369753 Gene ID= ENSG00000100592.15 TPM= 6.34 Transcript Type= protein_coding chr14 59472617 59484430 59472617 59484430 - ENST00000247194.8@L3HYPDH ENST00000247194.8 protein_coding 59483809,59479182,59476092,59475869,59472617 59484430,59479351,59476214,59476006,59473090 Gene ID= ENSG00000126790.11 TPM= 7.24 Transcript Type= protein_coding chr14 59472688 59484441 59472688 59484441 - transcript1373.chr14.nic@L3HYPDH transcript1373.chr14.nic protein_coding 59483680,59479182,59476092,59474439,59472688 59484441,59479351,59476214,59476006,59473090 Gene ID= ENSG00000126790.11 TPM= 1.81 Transcript Type= NA chr14 59484443 59505404 59484443 59505404 + ENST00000616435.4@JKAMP ENST00000616435.4 protein_coding 59484443,59486713,59487674,59495018,59498727,59503854 59484593,59486804,59487828,59495224,59498908,59505404 Gene ID= ENSG00000050130.17 TPM= 2.94 Transcript Type= protein_coding chr14 59484443 59504715 59484443 59504715 + ENST00000261247.13@JKAMP ENST00000261247.13 protein_coding 59484443,59486713,59487674,59495018,59498727,59501191,59503854 59484593,59486804,59487828,59495224,59498908,59501267,59504715 Gene ID= ENSG00000050130.17 TPM= 57.12 Transcript Type= protein_coding chr14 59484503 59504703 59484503 59504703 + ENST00000425728.6@JKAMP ENST00000425728.6 protein_coding 59484503,59486731,59487674,59495018,59498727,59501191,59503854 59484593,59486804,59487828,59495224,59498908,59501267,59504703 Gene ID= ENSG00000050130.17 TPM= 12.3 Transcript Type= protein_coding chr14 59484545 59504705 59484545 59504705 + ENST00000554271.5@JKAMP ENST00000554271.5 protein_coding 59484545,59486713,59487674,59495018,59498727,59501191,59503854 59485116,59486804,59487828,59495224,59498908,59501267,59504705 Gene ID= ENSG00000050130.17 TPM= 2.79 Transcript Type= protein_coding chr14 60091919 60134814 60091919 60134814 + ENST00000406854.5@PCNX4 ENST00000406854.5 protein_coding 60091919,60107586,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970 60092419,60108327,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60134814 Gene ID= ENSG00000126773.12 TPM= 16.3 Transcript Type= protein_coding chr14 60092262 60134810 60092262 60134810 + transcript1388.chr14.nic@PCNX4 transcript1388.chr14.nic protein_coding 60092262,60107586,60114700,60114974,60115719,60115941,60118575,60121196,60124218,60125637,60133970 60092419,60108327,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60134810 Gene ID= ENSG00000126773.12 TPM= 1.81 Transcript Type= NA chr14 60091911 60148221 60091911 60148221 + ENST00000317623.8@PCNX4 ENST00000317623.8 protein_coding 60091911,60114700,60114974,60115719,60115941,60118329,60121196,60124218,60125637,60133970 60092419,60114879,60115461,60115819,60116060,60118692,60121299,60125251,60125823,60148221 Gene ID= ENSG00000126773.12 TPM= 12.68 Transcript Type= protein_coding chr14 60144120 60169856 60144120 60169856 - ENST00000216500.9@DHRS7 ENST00000216500.9 protein_coding 60169697,60165177,60156000,60153959,60152939,60150065,60149353,60144120 60169856,60165605,60156152,60154065,60153178,60150187,60149568,60145013 Gene ID= ENSG00000100612.13 TPM= 14.49 Transcript Type= protein_coding chr14 60144784 60165429 60144784 60165429 - ENST00000557185.5@DHRS7 ENST00000557185.5 protein_coding 60165177,60156000,60153959,60152939,60150065,60149353,60144784 60165429,60156152,60154065,60153178,60150187,60149568,60145013 Gene ID= ENSG00000100612.13 TPM= 255.36 Transcript Type= protein_coding chr14 60152689 60165350 60152689 60165350 - ENST00000556502.1@DHRS7 ENST00000556502.1 protein_coding 60165177,60156000,60153959,60152689 60165350,60156152,60154065,60153178 Gene ID= ENSG00000100612.13 TPM= 1.81 Transcript Type= retained_intron chr14 60249191 60293342 60249191 60293342 + transcript1400.chr14.nic@PPM1A transcript1400.chr14.nic protein_coding 60249191,60250380,60282684,60285624,60289806,60291397,60292453 60249677,60250481,60283537,60285741,60289914,60291454,60293342 Gene ID= ENSG00000100614.17 TPM= 3.17 Transcript Type= NA chr14 60249243 60293358 60249243 60293358 + transcript1401.chr14.nnic@PPM1A transcript1401.chr14.nnic protein_coding 60249243,60268293,60282684,60285624,60289806,60291397,60292453 60249677,60268435,60283537,60285741,60289914,60291454,60293358 Gene ID= ENSG00000100614.17 TPM= 4.07 Transcript Type= NA chr14 60709548 60724351 60709548 60724351 - transcript1412.chr14.nic@SIX4 transcript1412.chr14.nic protein_coding 60724256,60723212,60719760,60709548 60724351,60724047,60720445,60714203 Gene ID= ENSG00000100625.8 TPM= 1.81 Transcript Type= NA chr14 60971451 60981358 60971451 60981358 - ENST00000261249.6@TRMT5 ENST00000261249.6 protein_coding 60980963,60979231,60977514,60975475,60971451 60981358,60979886,60977638,60976126,60975194 Gene ID= ENSG00000126814.6 TPM= 9.96 Transcript Type= protein_coding chr14 60981145 61083732 60981145 61083732 + transcript1418.chr14.nic@SLC38A6 transcript1418.chr14.nic protein_coding 60981145,60982508,60984730,61015904,61019541,61030445,61037059,61037625,61043147,61043450,61045346,61046067,61050512,61051787,61052041,61078810,61083550 60981382,60982638,60984803,61015956,61019580,61030523,61037141,61037683,61043212,61043503,61045425,61046167,61050636,61051931,61052135,61078927,61083732 Gene ID= ENSG00000139974.15 TPM= 2.72 Transcript Type= NA chr14 61280303 61550973 61280303 61550973 + transcript1426.chr14.nnic@PRKCH transcript1426.chr14.nnic protein_coding 61280303,61321994,61391225,61443111,61445692,61449164,61450842,61453226,61457176,61457506,61485502,61529075,61530407,61547743,61549685 61281308,61322464,61391288,61443261,61445726,61449252,61450971,61453353,61457319,61457679,61485656,61529213,61530595,61547886,61550973 Gene ID= ENSG00000027075.14 TPM= 2.26 Transcript Type= NA chr14 61527950 61550973 61527950 61550973 + transcript1432.chr14.nic@PRKCH transcript1432.chr14.nic protein_coding 61527950,61529075,61530407,61547743,61549685 61528061,61529213,61530595,61547886,61550973 Gene ID= ENSG00000027075.14 TPM= 1.81 Transcript Type= NA chr14 61321717 61550976 61321717 61550976 + ENST00000332981.9@PRKCH ENST00000332981.9 protein_coding 61321717,61391225,61443111,61445692,61449164,61450842,61453226,61457176,61457506,61485502,61529075,61530407,61547743,61549685 61322464,61391288,61443261,61445726,61449252,61450971,61453353,61457319,61457679,61485656,61529213,61530595,61547886,61550976 Gene ID= ENSG00000027075.14 TPM= 20.37 Transcript Type= protein_coding chr14 61695540 61748258 61695540 61748258 + ENST00000394997.5@HIF1A ENST00000394997.5 protein_coding 61695540,61720379,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61740505,61740755,61744705,61745691,61746934 61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61740627,61741188,61744813,61745817,61748258 Gene ID= ENSG00000100644.16 TPM= 48.6 Transcript Type= protein_coding chr14 61695777 61748258 61695777 61748258 + ENST00000323441.10@HIF1A ENST00000323441.10 protein_coding 61695777,61720382,61721509,61721739,61726706,61727453,61732418,61734138,61736889,61738087,61740505,61740755,61744705,61746934 61695839,61720572,61721654,61721823,61726818,61727655,61732524,61734285,61737109,61738373,61740627,61741188,61744813,61748258 Gene ID= ENSG00000100644.16 TPM= 5.13 Transcript Type= protein_coding chr14 61762357 61796428 61762357 61796428 + ENST00000216294.4@SNAPC1 ENST00000216294.4 protein_coding 61762357,61766876,61767212,61768636,61776095,61778072,61778848,61782247,61792807,61794949 61762588,61767035,61767352,61768740,61776253,61778140,61778910,61782397,61792902,61796428 Gene ID= ENSG00000023608.4 TPM= 23.54 Transcript Type= protein_coding chr14 63597039 63641874 63597039 63641874 - transcript1447.chr14.nnic@WDR89 transcript1447.chr14.nnic protein_coding 63641804,63624928,63597039 63641874,63625033,63599973 Gene ID= ENSG00000140006.11 TPM= 12.68 Transcript Type= NA chr14 63684214 63728039 63684214 63728039 - ENST00000247225.6@SGPP1 ENST00000247225.6 protein_coding 63727261,63698569,63684214 63728039,63698658,63686656 Gene ID= ENSG00000126821.7 TPM= 37.13 Transcript Type= protein_coding chr14 64197011 64226432 64197011 64226432 + transcript1456.chr14.nnic@SYNE2 transcript1456.chr14.nnic protein_coding 64197011,64202801,64208758,64209428,64209942,64211961,64212811,64214194,64216248,64218398,64219208,64220437,64221534,64223189,64224461,64224996,64225319 64197104,64202963,64208945,64209578,64210124,64212098,64213005,64214470,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226432 Gene ID= ENSG00000054654.16 TPM= 1.81 Transcript Type= NA chr14 64196788 64226432 64196788 64226432 + transcript1458.chr14.nnic@SYNE2 transcript1458.chr14.nnic protein_coding 64196788,64202801,64208758,64209428,64209942,64211961,64212811,64214194,64216248,64218398,64219208,64220437,64221576,64223189,64224461,64224996,64225319 64197104,64202963,64208945,64209578,64210124,64212098,64213005,64214470,64216387,64218512,64219410,64220637,64221704,64223380,64224547,64225045,64226432 Gene ID= ENSG00000054654.16 TPM= 21.73 Transcript Type= NA chr14 64217816 64294371 64217816 64294371 - transcript1468.chr14.nnic@ESR2 transcript1468.chr14.nnic protein_coding 64294033,64282624,64279981,64268795,64260449,64257226,64249546,64234970,64227495,64217816 64294371,64283075,64280153,64268911,64260748,64257364,64249679,64235150,64227614,64222197 Gene ID= ENSG00000140009.18 TPM= 3.62 Transcript Type= NA chr14 64227035 64294410 64227035 64294410 - ENST00000353772.7@ESR2 ENST00000353772.7 protein_coding 64294033,64282624,64279981,64268795,64260449,64257226,64249546,64234970,64227035 64294410,64283075,64280153,64268911,64260748,64257364,64249679,64235150,64227614 Gene ID= ENSG00000140009.18 TPM= 6.34 Transcript Type= protein_coding chr14 64388350 64460004 64388350 64460004 + ENST00000216605.12@MTHFD1 ENST00000216605.12 protein_coding 64388350,64400793,64411090,64412472,64415358,64415639,64417888,64419814,64424804,64425730,64426019,64427337,64430184,64431532,64431787,64435569,64439096,64440126,64441385,64442054,64442263,64444693,64448217,64449445,64453754,64454723,64458214,64459759 64388468,64400877,64411149,64412525,64415494,64415739,64418024,64419925,64424931,64425827,64426192,64427473,64430230,64431639,64431861,64435671,64439172,64440266,64441453,64442165,64442402,64444734,64448317,64449622,64453861,64454875,64458307,64460004 Gene ID= ENSG00000100714.15 TPM= 109.57 Transcript Type= protein_coding chr14 64446365 64503662 64446365 64503662 - transcript1497.chr14.nnic@ZBTB25 transcript1497.chr14.nnic protein_coding 64503557,64490361,64446365 64503662,64490540,64449638 Gene ID= ENSG00000089775.11 TPM= 2.26 Transcript Type= NA chr14 64447177 64503872 64447177 64503872 - transcript1498.chr14.nic@ZBTB25 transcript1498.chr14.nic protein_coding 64503661,64490361,64447177 64503872,64490540,64449638 Gene ID= ENSG00000089775.11 TPM= 6.79 Transcript Type= NA chr14 64914361 64935368 64914361 64935368 + ENST00000607599.5@CHURC1 ENST00000607599.5 protein_coding 64914361,64923991,64926007,64932138 64914534,64924126,64926080,64935368 Gene ID= ENSG00000258289.8 TPM= 97.8 Transcript Type= protein_coding chr14 64914415 64932320 64914415 64932320 + ENST00000548752.6@CHURC1 ENST00000548752.6 protein_coding 64914415,64923991,64932138 64914534,64924126,64932320 Gene ID= ENSG00000258289.8 TPM= 8.15 Transcript Type= protein_coding chr14 64945816 64972414 64945816 64972414 - ENST00000533601.6@RAB15 ENST00000533601.6 protein_coding 64971953,64952511,64951603,64951074,64950325,64948668,64945816 64972414,64952571,64951663,64951151,64950414,64948733,64948512 Gene ID= ENSG00000139998.14 TPM= 1.81 Transcript Type= protein_coding chr14 64987207 65062652 64987207 65062652 + transcript1514.chr14.nic@FNTB transcript1514.chr14.nic protein_coding 64987207,65004249,65012317,65015625,65027453,65027698,65032610,65040790,65044311,65053238,65054575,65061181 64987562,65004313,65012389,65015716,65027599,65027781,65032696,65040919,65044443,65053349,65054689,65062652 Gene ID= ENSG00000257365.7 TPM= 8.15 Transcript Type= NA chr14 65075124 65102504 65075124 65102504 - ENST00000358402.8@MAX ENST00000358402.8 protein_coding 65102304,65093708,65077913,65075124 65102504,65093815,65078036,65076663 Gene ID= ENSG00000125952.18 TPM= 19.47 Transcript Type= protein_coding chr14 65075544 65102470 65075544 65102470 - ENST00000358664.8@MAX ENST00000358664.8 protein_coding 65102304,65101546,65093708,65077913,65075544 65102470,65101572,65093815,65078036,65076663 Gene ID= ENSG00000125952.18 TPM= 3.17 Transcript Type= protein_coding chr14 65083744 65102509 65083744 65102509 - ENST00000246163.2@MAX ENST00000246163.2 protein_coding 65102304,65101546,65093708,65083744 65102509,65101572,65093815,65084299 Gene ID= ENSG00000125952.18 TPM= 5.43 Transcript Type= protein_coding chr14 65411897 65743243 65411897 65743243 + transcript1535.chr14.nic@FUT8 transcript1535.chr14.nic protein_coding 65411897,65430216,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093 65411993,65430309,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65743243 Gene ID= ENSG00000033170.16 TPM= 1.81 Transcript Type= NA chr14 65410592 65744121 65410592 65744121 + ENST00000360689.9@FUT8 ENST00000360689.9 protein_coding 65410592,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093 65411993,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65744121 Gene ID= ENSG00000033170.16 TPM= 9.96 Transcript Type= protein_coding chr14 65412809 65743116 65412809 65743116 + transcript1538.chr14.nic@FUT8 transcript1538.chr14.nic protein_coding 65412809,65455621,65561337,65615978,65616211,65629492,65669243,65721775,65724147,65733231,65742093 65413214,65455718,65561766,65616093,65616373,65629606,65669480,65722021,65724323,65733381,65743116 Gene ID= ENSG00000033170.16 TPM= 3.62 Transcript Type= NA chr14 66492975 66507855 66492975 66507855 - transcript1541.chr14.nnic@AL359232.1 transcript1541.chr14.nnic lincRNA 66507643,66505285,66496262,66492975 66507855,66505345,66496342,66494856 Gene ID= ENSG00000258561.1 TPM= 1.81 Transcript Type= NA chr14 66507407 67181803 66507407 67181803 + ENST00000478722.5@GPHN ENST00000478722.5 protein_coding 66507407,66681107,66776464,66824474,66879939,66916003,66922666,66924194,66965191,67023633,67058649,67088983,67100856,67110140,67111861,67113018,67122256,67143362,67159415,67165162,67168933,67179578,67180804 66508591,66681185,66776521,66824566,66880033,66916069,66922938,66924292,66965325,67023675,67058786,67089075,67100911,67110259,67111919,67113171,67122377,67143449,67159488,67165226,67169036,67179674,67181803 Gene ID= ENSG00000171723.15 TPM= 15.39 Transcript Type= protein_coding chr14 67241109 67335819 67241109 67335819 + ENST00000261681.8@MPP5 ENST00000261681.8 protein_coding 67241109,67269701,67279018,67292511,67301389,67301972,67302410,67303522,67312527,67316832,67317408,67320230,67321057,67323702,67332780 67241533,67269783,67279537,67292719,67301466,67302118,67302571,67303599,67312710,67316903,67317479,67320397,67321259,67323812,67335819 Gene ID= ENSG00000072415.8 TPM= 7.24 Transcript Type= protein_coding chr14 67241423 67335819 67241423 67335819 + ENST00000555925.5@MPP5 ENST00000555925.5 protein_coding 67241423,67269701,67279250,67292511,67301389,67301972,67302410,67303522,67312527,67316832,67317408,67320230,67321057,67323702,67332780 67241533,67269783,67279537,67292719,67301466,67302118,67302571,67303599,67312710,67316903,67317479,67320397,67321259,67323812,67335819 Gene ID= ENSG00000072415.8 TPM= 1.81 Transcript Type= protein_coding chr14 67360504 67383859 67360504 67383859 + transcript1559.chr14.nic@EIF2S1 transcript1559.chr14.nic protein_coding 67360504,67364767,67374468,67376439,67380659,67381593,67382447,67383315 67360734,67365008,67374547,67376590,67380765,67381690,67382590,67383859 Gene ID= ENSG00000134001.12 TPM= 3.17 Transcript Type= NA chr14 67359997 67386516 67359997 67386516 + ENST00000256383.8@EIF2S1 ENST00000256383.8 protein_coding 67359997,67364767,67374468,67376439,67380659,67381593,67382447,67383315 67360456,67365008,67374547,67376590,67380765,67381690,67382590,67386516 Gene ID= ENSG00000134001.12 TPM= 60.22 Transcript Type= protein_coding chr14 67386983 67412200 67386983 67412200 - ENST00000216446.8@PLEK2 ENST00000216446.8 protein_coding 67412018,67397662,67395402,67393150,67392662,67392326,67390663,67388224,67386983 67412200,67397826,67395583,67393241,67392849,67392427,67390746,67388302,67387456 Gene ID= ENSG00000100558.8 TPM= 77.88 Transcript Type= protein_coding chr14 67470267 67515623 67470267 67515623 - transcript1567.chr14.nic@TMEM229B transcript1567.chr14.nic protein_coding 67515445,67487000,67470267 67515623,67487172,67473941 Gene ID= ENSG00000198133.8 TPM= 16.3 Transcript Type= NA chr14 67589313 67600317 67589313 67600317 - transcript1572.chr14.nic@PIGH transcript1572.chr14.nic protein_coding 67600024,67593743,67592635,67592315,67589313 67600317,67593952,67592718,67592436,67590172 Gene ID= ENSG00000100564.8 TPM= 2.72 Transcript Type= NA chr14 67589313 67600317 67589313 67600317 - transcript1575.chr14.nic@PIGH transcript1575.chr14.nic protein_coding 67600024,67592635,67589313 67600317,67593952,67590172 Gene ID= ENSG00000100564.8 TPM= 2.72 Transcript Type= NA chr14 67619798 67651720 67619798 67651720 + ENST00000261783.3@ARG2 ENST00000261783.3 protein_coding 67619798,67620894,67642186,67645643,67646644,67646921,67648047,67650715 67620088,67620966,67642363,67645802,67646738,67647025,67648183,67651720 Gene ID= ENSG00000081181.7 TPM= 10.87 Transcript Type= protein_coding chr14 67651146 67674624 67651146 67674624 - transcript1581.chr14.nic@VTI1B transcript1581.chr14.nic protein_coding 67674375,67659731,67656416,67653437,67651146 67674624,67659922,67656589,67653498,67651481 Gene ID= ENSG00000100568.10 TPM= 3.62 Transcript Type= NA chr14 67651152 67674630 67651152 67674630 - transcript1582.chr14.nic@VTI1B transcript1582.chr14.nic protein_coding 67674375,67662477,67659731,67656416,67651152 67674630,67662535,67659922,67656589,67651481 Gene ID= ENSG00000100568.10 TPM= 1.81 Transcript Type= NA chr14 67647075 67674831 67647075 67674831 - ENST00000554659.5@VTI1B ENST00000554659.5 protein_coding 67674375,67662477,67659731,67656416,67653437,67647075 67674831,67662535,67659922,67656589,67653498,67651481 Gene ID= ENSG00000100568.10 TPM= 54.33 Transcript Type= protein_coding chr14 67676801 67695814 67676801 67695814 - ENST00000381346.8@RDH11 ENST00000381346.8 protein_coding 67695630,67692934,67692438,67691140,67690212,67685015,67676801 67695814,67693052,67692593,67691244,67690421,67685204,67678423 Gene ID= ENSG00000072042.12 TPM= 225.86 Transcript Type= protein_coding chr14 67677364 67695754 67677364 67695754 - ENST00000553384.5@RDH11 ENST00000553384.5 protein_coding 67695630,67692973,67692438,67691140,67690212,67685015,67677364 67695754,67693052,67692593,67691244,67690421,67685204,67678423 Gene ID= ENSG00000072042.12 TPM= 12.15 Transcript Type= protein_coding chr14 67722493 67734450 67722493 67734450 + transcript1595.chr14.nic@RDH12 transcript1595.chr14.nic protein_coding 67722493,67724473,67725099,67726051,67726981,67729191,67733746 67722710,67724591,67725254,67726155,67727190,67729380,67734450 Gene ID= ENSG00000139988.9 TPM= 4.53 Transcript Type= NA chr14 67819812 67887326 67819812 67887326 + ENST00000390683.7@RAD51B ENST00000390683.7 protein_coding 67819812,67823542,67825464,67835080,67865003,67885869,67887021 67819853,67823627,67825577,67835196,67865139,67885988,67887326 Gene ID= ENSG00000182185.18 TPM= 1.81 Transcript Type= protein_coding chr14 68291884 68497781 68291884 68497781 + transcript1598.chr14.nic@RAD51B transcript1598.chr14.nic protein_coding 68291884,68411424,68468172,68497124 68291980,68411527,68468250,68497781 Gene ID= ENSG00000182185.18 TPM= 2.72 Transcript Type= NA chr14 68291884 68596049 68291884 68596049 + transcript1599.chr14.nic@RAD51B transcript1599.chr14.nic protein_coding 68291884,68411424,68468172,68594485 68291980,68411527,68468250,68596049 Gene ID= ENSG00000182185.18 TPM= 6.34 Transcript Type= NA chr14 68787662 68793240 68787662 68793240 - ENST00000439696.2@ZFP36L1 ENST00000439696.2 protein_coding 68792882,68787662 68793240,68790492 Gene ID= ENSG00000185650.9 TPM= 95.99 Transcript Type= protein_coding chr14 68874120 68978748 68874120 68978748 - transcript1614.chr14.nic@ACTN1 transcript1614.chr14.nic protein_coding 68978217,68925558,68921006,68912156,68909955,68909318,68904655,68902477,68893655,68892053,68890139,68885425,68884775,68884168,68882873,68882458,68880810,68879962,68878989,68877082,68874120 68978748,68925672,68921125,68912242,68910042,68909396,68904736,68902562,68893747,68892283,68890286,68885575,68884883,68884308,68883055,68882592,68880989,68880108,68879069,68877240,68875017 Gene ID= ENSG00000072110.13 TPM= 21.13 Transcript Type= NA chr14 69050921 69153155 69050921 69153155 - transcript1634.chr14.nic@DCAF5 transcript1634.chr14.nic protein_coding 69152944,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69050921 69153155,69122360,69119230,69118278,69116495,69091887,69075411,69062511,69055611 Gene ID= ENSG00000139990.17 TPM= 4.91 Transcript Type= NA chr14 69050921 69153162 69050921 69153162 - transcript1635.chr14.nic@DCAF5 transcript1635.chr14.nic protein_coding 69152765,69122217,69118139,69116366,69091674,69075345,69062384,69050921 69153162,69122360,69119230,69116495,69091887,69075411,69062511,69055611 Gene ID= ENSG00000139990.17 TPM= 8.53 Transcript Type= NA chr14 69050922 69153162 69050922 69153162 - transcript1636.chr14.nic@DCAF5 transcript1636.chr14.nic protein_coding 69152765,69122217,69119194,69118139,69116366,69091674,69075345,69050922 69153162,69122360,69119230,69118278,69116495,69091887,69075411,69055611 Gene ID= ENSG00000139990.17 TPM= 5.81 Transcript Type= NA chr14 69051855 69152599 69051855 69152599 - ENST00000554215.5@DCAF5 ENST00000554215.5 protein_coding 69152414,69122217,69119194,69118139,69116366,69091674,69075345,69062384,69051855 69152599,69122360,69119230,69118278,69116495,69091887,69075411,69062511,69055611 Gene ID= ENSG00000139990.17 TPM= 4.3 Transcript Type= protein_coding chr14 69191478 69243967 69191478 69243967 + transcript1638.chr14.nic@EXD2 transcript1638.chr14.nic protein_coding 69191478,69203917,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884 69191591,69204000,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69243967 Gene ID= ENSG00000081177.18 TPM= 15.39 Transcript Type= NA chr14 69191511 69242358 69191511 69242358 + ENST00000409018.7@EXD2 ENST00000409018.7 protein_coding 69191511,69209424,69228816,69230472,69234700,69236046,69236407,69237575,69240884 69191591,69209803,69229072,69230598,69235031,69236152,69236542,69237931,69242358 Gene ID= ENSG00000081177.18 TPM= 6.34 Transcript Type= protein_coding chr14 69259475 69354473 69259475 69354473 + transcript1642.chr14.nic@GALNT16 transcript1642.chr14.nic protein_coding 69259475,69260178,69320711,69324692,69325337,69325962,69328450,69331464,69333085,69333497,69338651,69339527,69341681,69347040,69347877,69352031,69353332 69259746,69260467,69320868,69324790,69325404,69326027,69328571,69331551,69333169,69333600,69338777,69339619,69341764,69347181,69348002,69352170,69354473 Gene ID= ENSG00000100626.16 TPM= 16.3 Transcript Type= NA chr14 69259593 69354467 69259593 69354467 + transcript1644.chr14.nic@GALNT16 transcript1644.chr14.nic protein_coding 69259593,69260178,69320711,69324692,69325337,69325962,69328450,69331464,69333085,69333497,69338651,69339527,69341681,69347040,69347877,69352031 69259746,69260467,69320868,69324790,69325404,69326027,69328571,69331551,69333169,69333600,69338777,69339619,69341764,69347181,69348002,69354467 Gene ID= ENSG00000100626.16 TPM= 17.21 Transcript Type= NA chr14 69259964 69357033 69259964 69357033 + ENST00000337827.8@GALNT16 ENST00000337827.8 protein_coding 69259964,69320711,69324692,69325337,69325962,69328450,69331464,69333085,69333497,69338651,69339527,69341681,69347040,69347877,69352031,69353332 69260467,69320868,69324790,69325404,69326027,69328571,69331551,69333169,69333600,69338777,69339619,69341764,69347181,69348002,69352170,69357033 Gene ID= ENSG00000100626.16 TPM= 16.3 Transcript Type= protein_coding chr14 69380123 69398627 69380123 69398627 - ENST00000557016.5@ERH ENST00000557016.5 protein_coding 69398231,69394825,69386963,69380123 69398627,69394912,69387083,69380640 Gene ID= ENSG00000100632.10 TPM= 32.6 Transcript Type= protein_coding chr14 69398692 69462381 69398692 69462381 + ENST00000031146.8@SLC39A9 ENST00000031146.8 protein_coding 69398692,69424094,69453241,69454812,69455732,69458363 69399465,69424202,69453309,69454897,69455866,69462381 Gene ID= ENSG00000029364.11 TPM= 14.49 Transcript Type= protein_coding chr14 69398692 69460551 69398692 69460551 + ENST00000336643.9@SLC39A9 ENST00000336643.9 protein_coding 69398692,69424094,69442069,69453241,69454812,69455732,69458363 69399465,69424202,69442266,69453309,69454897,69455866,69460551 Gene ID= ENSG00000029364.11 TPM= 7.24 Transcript Type= protein_coding chr14 69611596 69715142 69611596 69715142 + ENST00000342745.4@SUSD6 ENST00000342745.4 protein_coding 69611596,69658513,69703395,69704604,69708677,69710954 69611828,69658713,69703592,69704742,69709104,69715142 Gene ID= ENSG00000100647.7 TPM= 57.05 Transcript Type= protein_coding chr14 69726900 69772004 69726900 69772004 + ENST00000553521.5@SRSF5 ENST00000553521.5 protein_coding 69726900,69766114,69768138,69768604,69768798,69769182,69770467,69770995,69771194 69727191,69767255,69768282,69768674,69768896,69769251,69770540,69771105,69772004 Gene ID= ENSG00000100650.15 TPM= 63.54 Transcript Type= protein_coding chr14 69767093 69771973 69767093 69771973 + ENST00000394366.6@SRSF5 ENST00000394366.6 protein_coding 69767093,69768138,69768604,69768798,69769182,69770467,69770995,69771194 69767380,69768282,69768674,69768896,69769251,69770540,69771105,69771973 Gene ID= ENSG00000100650.15 TPM= 18.86 Transcript Type= protein_coding chr14 69767093 69772004 69767093 69772004 + ENST00000554465.5@SRSF5 ENST00000554465.5 protein_coding 69767093,69768138,69768604,69768798,69770995,69771194 69767255,69768282,69768674,69770540,69771105,69772004 Gene ID= ENSG00000100650.15 TPM= 12.38 Transcript Type= retained_intron chr14 69767124 69771991 69767124 69771991 + ENST00000557154.5@SRSF5 ENST00000557154.5 protein_coding 69767124,69768138,69768604,69768798,69769182,69770467,69770995,69771194 69767255,69768282,69768674,69768896,69769251,69770540,69771105,69771991 Gene ID= ENSG00000100650.15 TPM= 27.32 Transcript Type= protein_coding chr14 69767186 69771654 69767186 69771654 + ENST00000555547.5@SRSF5 ENST00000555547.5 protein_coding 69767186,69768138,69768604,69768798,69769182,69769511,69770995,69771194 69767255,69768282,69768674,69768896,69769251,69770540,69771105,69771654 Gene ID= ENSG00000100650.15 TPM= 2.11 Transcript Type= nonsense_mediated_decay chr14 69767172 69771642 69767172 69771642 + ENST00000556184.5@SRSF5 ENST00000556184.5 protein_coding 69767172,69768138,69768604,69768798,69769182,69770995,69771194 69767380,69768282,69768674,69768896,69770540,69771105,69771642 Gene ID= ENSG00000100650.15 TPM= 2.56 Transcript Type= retained_intron chr14 70325081 70359731 70325081 70359731 - ENST00000389912.6@COX16 ENST00000389912.6 protein_coding 70359519,70342658,70329174,70325081 70359731,70342729,70329236,70326449 Gene ID= ENSG00000133983.14 TPM= 99.61 Transcript Type= protein_coding chr14 70326068 70359700 70326068 70359700 - ENST00000557612.5@COX16 ENST00000557612.5 protein_coding 70359519,70329174,70326068 70359700,70329236,70326449 Gene ID= ENSG00000133983.14 TPM= 11.77 Transcript Type= processed_transcript chr14 70583589 70600667 70583589 70600667 - ENST00000256379.9@MED6 ENST00000256379.9 protein_coding 70600616,70597618,70596611,70593296,70592880,70591266,70585756,70583589 70600667,70597777,70596702,70593378,70592988,70591381,70585783,70584943 Gene ID= ENSG00000133997.11 TPM= 18.11 Transcript Type= protein_coding chr14 70907565 70996870 70907565 70996870 + transcript1677.chr14.nic@PCNX1 transcript1677.chr14.nic protein_coding 70907565,70946915,70962226,70968198,70969021,70976942,70988567,70995741 70908003,70947123,70962331,70968243,70969110,70978648,70988699,70996870 Gene ID= ENSG00000100731.15 TPM= 1.81 Transcript Type= NA chr14 71320478 71739401 71320478 71739401 + transcript1681.chr14.nic@SIPA1L1 transcript1681.chr14.nic protein_coding 71320478,71321122,71413948,71512743,71529312,71587571,71618757,71624048,71650335,71658333,71661310,71671119,71672348,71685362,71698981,71702381,71705222,71709222,71723647,71724670,71730055,71733666,71735277,71738241,71739018 71320503,71321181,71414014,71512845,71529370,71589370,71618887,71624236,71650509,71658436,71661467,71671692,71672622,71685631,71699127,71702505,71705340,71709664,71723886,71724835,71730301,71733812,71735391,71738325,71739401 Gene ID= ENSG00000197555.9 TPM= 5.07 Transcript Type= NA chr14 71320402 71741205 71320402 71741205 + transcript1683.chr14.nnic@SIPA1L1 transcript1683.chr14.nnic protein_coding 71320402,71321122,71512743,71529312,71587571,71618757,71624048,71650335,71658333,71661310,71671119,71672348,71685362,71698981,71702381,71705222,71709222,71723647,71724670,71730055,71733666,71735277,71738241,71739018 71320503,71321181,71512845,71529370,71589370,71618887,71624236,71650509,71658436,71661467,71671692,71672622,71685631,71699127,71702505,71705340,71709664,71723886,71724835,71730301,71733812,71735391,71738325,71741205 Gene ID= ENSG00000197555.9 TPM= 8.69 Transcript Type= NA chr14 71321041 71739401 71321041 71739401 + transcript1684.chr14.nnic@SIPA1L1 transcript1684.chr14.nnic protein_coding 71321041,71512743,71528699,71529312,71587571,71618757,71624048,71650335,71658333,71661310,71671119,71672348,71685362,71698981,71702381,71705222,71709222,71723647,71724670,71730055,71733666,71735277,71738241,71739018 71321181,71512845,71528740,71529370,71589370,71618887,71624236,71650509,71658436,71661467,71671692,71672622,71685631,71699127,71702505,71705340,71709664,71723886,71724835,71730301,71733812,71735391,71738325,71739401 Gene ID= ENSG00000197555.9 TPM= 3.26 Transcript Type= NA chr14 71320977 71741205 71320977 71741205 + transcript1687.chr14.nnic@SIPA1L1 transcript1687.chr14.nnic protein_coding 71320977,71512743,71529312,71587571,71618757,71624048,71650335,71658333,71661310,71671119,71672348,71685362,71698981,71702381,71705222,71709222,71723647,71724670,71730055,71733666,71735277,71738241,71739018 71321181,71512845,71529370,71589370,71618887,71624236,71650509,71658436,71661467,71671692,71672622,71685631,71699127,71702505,71705340,71709664,71723886,71724835,71730301,71733812,71735391,71738325,71741205 Gene ID= ENSG00000197555.9 TPM= 7.79 Transcript Type= NA chr14 71321395 71739401 71321395 71739401 + transcript1688.chr14.nic@SIPA1L1 transcript1688.chr14.nic protein_coding 71321395,71512743,71529312,71587571,71618757,71624048,71650335,71658333,71661310,71671119,71672348,71685362,71698981,71702381,71705222,71709222,71723647,71724670,71730055,71733666,71735277,71738241,71739018 71321531,71512845,71529370,71589370,71618887,71624236,71650509,71658436,71661467,71671692,71672622,71685631,71699127,71702505,71705340,71709664,71723886,71724835,71730301,71733812,71735391,71738325,71739401 Gene ID= ENSG00000197555.9 TPM= 3.26 Transcript Type= NA chr14 72661043 72894116 72661043 72894116 - ENST00000541685.5@DPF3 ENST00000541685.5 protein_coding 72894057,72771733,72753264,72731807,72723633,72714423,72693076,72674240,72669952,72661043 72894116,72771893,72753371,72731934,72723728,72714501,72693213,72674368,72671338,72662833 Gene ID= ENSG00000205683.11 TPM= 1.81 Transcript Type= protein_coding chr14 72926461 72959648 72926461 72959648 + transcript1698.chr14.nic@DCAF4 transcript1698.chr14.nic protein_coding 72926461,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612 72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954483,72955696,72956500,72959648 Gene ID= ENSG00000119599.16 TPM= 7.24 Transcript Type= NA chr14 72926487 72959644 72926487 72959644 + ENST00000555042.5@DCAF4 ENST00000555042.5 protein_coding 72926487,72937971,72939802,72940220,72941745,72942994,72945884,72947142,72951798,72954161,72954386,72955523,72956386,72958612 72926543,72938070,72939902,72940377,72941824,72943096,72946027,72947191,72951877,72954262,72954462,72955696,72956500,72959644 Gene ID= ENSG00000119599.16 TPM= 1.81 Transcript Type= protein_coding chr14 73058514 73121312 73058514 73121312 + transcript1712.chr14.nnic@RBM25 transcript1712.chr14.nnic protein_coding 73058514,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73100301,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713 73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73100362,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73121312 Gene ID= ENSG00000119707.13 TPM= 2.72 Transcript Type= NA chr14 73058436 73123898 73058436 73123898 + ENST00000261973.11@RBM25 ENST00000261973.11 protein_coding 73058436,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667,73103192,73105859,73106196,73107826,73109342,73110831,73111528,73112152,73114286,73119713 73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73099750,73103478,73106081,73106285,73107899,73109492,73111155,73111802,73112250,73114333,73123898 Gene ID= ENSG00000119707.13 TPM= 24.45 Transcript Type= protein_coding chr14 73058547 73101179 73058547 73101179 + ENST00000525321.5@RBM25 ENST00000525321.5 protein_coding 73058547,73071627,73076319,73077369,73083494,73088001,73096915,73099380,73099667 73058705,73071747,73076368,73077536,73083551,73088161,73097100,73099433,73101179 Gene ID= ENSG00000119707.13 TPM= 1.81 Transcript Type= protein_coding chr14 73136447 73220401 73136447 73220401 + ENST00000357710.8@PSEN1 ENST00000357710.8 protein_coding 73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134 73136583,73147876,73148094,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73220401 Gene ID= ENSG00000080815.18 TPM= 39.84 Transcript Type= protein_coding chr14 73136447 73223691 73136447 73223691 + ENST00000324501.9@PSEN1 ENST00000324501.9 protein_coding 73136447,73147795,73147967,73170797,73173566,73186853,73192644,73198031,73206386,73211769,73217126,73219134 73136583,73147876,73148106,73171047,73173707,73186920,73192864,73198129,73206472,73211942,73217244,73223691 Gene ID= ENSG00000080815.18 TPM= 28.07 Transcript Type= protein_coding chr14 73237514 73274632 73237514 73274632 + transcript1727.chr14.nic@PAPLN transcript1727.chr14.nic protein_coding 73237514,73239773,73244644,73245636,73246073,73249984,73250907,73251486,73251664,73252018,73252649,73253754,73254513,73254877,73258979,73259269,73260709,73261156,73262350,73263645,73264211,73264588,73265370,73266501,73266723,73268557,73272495 73237592,73239832,73244759,73245696,73246175,73250114,73251030,73251566,73251836,73252141,73252775,73253961,73254695,73255018,73259059,73259545,73260829,73261294,73262827,73263782,73264335,73264726,73265507,73266628,73266831,73268723,73274632 Gene ID= ENSG00000100767.15 TPM= 9.06 Transcript Type= NA chr14 73275219 73458596 73275219 73458596 - transcript1730.chr14.nic@NUMB transcript1730.chr14.nic protein_coding 73458493,73409937,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73279281,73275219 73458596,73410068,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73279424,73277293 Gene ID= ENSG00000133961.19 TPM= 3.44 Transcript Type= NA chr14 73274401 73458596 73274401 73458596 - transcript1732.chr14.nic@NUMB transcript1732.chr14.nic protein_coding 73458493,73409937,73355626,73323130,73316390,73297211,73292734,73287110,73284081,73282359,73274401 73458596,73410068,73355766,73323204,73316422,73297285,73292874,73287314,73284374,73282505,73277293 Gene ID= ENSG00000133961.19 TPM= 8.27 Transcript Type= NA chr14 73275211 73458597 73275211 73458597 - transcript1736.chr14.nnic@NUMB transcript1736.chr14.nnic protein_coding 73458493,73366897,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275211 73458597,73366981,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293 Gene ID= ENSG00000133961.19 TPM= 4.65 Transcript Type= NA chr14 73275205 73458596 73275205 73458596 - transcript1737.chr14.nic@NUMB transcript1737.chr14.nic protein_coding 73458493,73409937,73355626,73323130,73297211,73292734,73287110,73284081,73282359,73275205 73458596,73410068,73355766,73323204,73297285,73292874,73287314,73284374,73282505,73277293 Gene ID= ENSG00000133961.19 TPM= 12.8 Transcript Type= NA chr14 73275211 73458596 73275211 73458596 - transcript1741.chr14.nic@NUMB transcript1741.chr14.nic protein_coding 73458493,73409937,73366897,73355626,73323130,73297211,73292734,73287110,73282359,73275211 73458596,73410068,73366981,73355766,73323204,73297285,73292874,73287314,73282505,73277293 Gene ID= ENSG00000133961.19 TPM= 5.25 Transcript Type= NA chr14 73286193 73458546 73286193 73458546 - ENST00000554315.5@NUMB ENST00000554315.5 protein_coding 73458493,73409937,73355626,73323130,73297211,73292734,73286193 73458546,73410068,73355766,73323204,73297285,73292874,73287314 Gene ID= ENSG00000133961.19 TPM= 1.81 Transcript Type= retained_intron chr14 73490964 73493392 73490964 73493392 + ENST00000304061.7@RIOX1 ENST00000304061.7 protein_coding 73490964 73493392 Gene ID= ENSG00000170468.7 TPM= 25.36 Transcript Type= protein_coding chr14 73569277 73575656 73569277 73575656 + transcript1747.chr14.nnic@ACOT2 transcript1747.chr14.nnic protein_coding 73569277,73573388,73574286,73574908 73569883,73573590,73574407,73575656 Gene ID= ENSG00000119673.14 TPM= 7.85 Transcript Type= NA chr14 73569034 73575653 73569034 73575653 + transcript1753.chr14.nic@ACOT2 transcript1753.chr14.nic protein_coding 73569034,73573388,73574908 73569396,73573590,73575653 Gene ID= ENSG00000119673.14 TPM= 8.76 Transcript Type= NA chr14 73591706 73596496 73591706 73596496 + ENST00000326303.4@ACOT4 ENST00000326303.4 protein_coding 73591706,73593702,73595049 73592416,73593904,73596496 Gene ID= ENSG00000177465.4 TPM= 7.24 Transcript Type= protein_coding chr14 73787201 73804448 73787201 73804448 + transcript1764.chr14.nnic@AC005520.2 transcript1764.chr14.nnic antisense_RNA 73787201,73789027,73802885 73787518,73789116,73804448 Gene ID= ENSG00000259065.1 TPM= 3.62 Transcript Type= NA chr14 73851844 73885456 73851844 73885456 + ENST00000555228.5@PTGR2 ENST00000555228.5 protein_coding 73851844,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101 73852004,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885456 Gene ID= ENSG00000140043.11 TPM= 15.69 Transcript Type= protein_coding chr14 73851947 73885459 73851947 73885459 + ENST00000267568.8@PTGR2 ENST00000267568.8 protein_coding 73851947,73858816,73860539,73874023,73876998,73879096,73880055,73881205,73882399,73884101 73852120,73858899,73860657,73874214,73877168,73879305,73880176,73881292,73882438,73885459 Gene ID= ENSG00000140043.11 TPM= 8.45 Transcript Type= protein_coding chr14 73886833 73933388 73886833 73933388 + transcript1786.chr14.nnic@ZNF410 transcript1786.chr14.nnic protein_coding 73886833,73888273,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73922066,73923395,73931503 73886915,73888364,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73933388 Gene ID= ENSG00000119725.18 TPM= 6.52 Transcript Type= NA chr14 73886708 73933388 73886708 73933388 + transcript1789.chr14.nic@ZNF410 transcript1789.chr14.nic protein_coding 73886708,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73922066,73923395,73931503 73886915,73892107,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73933388 Gene ID= ENSG00000119725.18 TPM= 7.43 Transcript Type= NA chr14 73886805 73932278 73886805 73932278 + ENST00000324593.10@ZNF410 ENST00000324593.10 protein_coding 73886805,73892027,73893797,73896316,73898071,73903960,73904902,73909341,73920980,73923395,73931503 73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73923522,73932278 Gene ID= ENSG00000119725.18 TPM= 6.34 Transcript Type= protein_coding chr14 73886871 73932278 73886871 73932278 + ENST00000398139.7@ZNF410 ENST00000398139.7 protein_coding 73886871,73892027,73893797,73896316,73898071,73903960,73904931,73909341,73920980,73922066,73923395,73927107,73931503 73886915,73892208,73893932,73896534,73898262,73904110,73905083,73909430,73921105,73922206,73923522,73927228,73932278 Gene ID= ENSG00000119725.18 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr14 73935746 73950192 73935746 73950192 - transcript1830.chr14.nic@FAM161B transcript1830.chr14.nic protein_coding 73949973,73946286,73944335,73942369,73940926,73937948,73937602,73935746 73950192,73946605,73944885,73942715,73941053,73938112,73937701,73936088 Gene ID= ENSG00000156050.8 TPM= 4.53 Transcript Type= NA chr14 73949926 73963108 73949926 73963108 + ENST00000394026.8@COQ6 ENST00000394026.8 protein_coding 73949926,73953435,73955451,73955805,73958147,73958971,73959162,73959415,73961173,73961455,73961737,73962970 73950180,73953569,73955509,73955928,73958277,73959078,73959224,73959522,73961375,73961570,73961903,73963108 Gene ID= ENSG00000119723.16 TPM= 11.77 Transcript Type= protein_coding chr14 73957913 74019321 73957913 74019321 - transcript1771.chr14.nic@ENTPD5 transcript1771.chr14.nic protein_coding 74019250,74015824,74011091,73987886,73986814,73983018,73977299,73977024,73976324,73975936,73974924,73973877,73972884,73971852,73970010,73957913 74019321,74015930,74011150,73988172,73986893,73983161,73977374,73977059,73976412,73976015,73974985,73973978,73973024,73971908,73970125,73959553 Gene ID= ENSG00000187097.12 TPM= 2.72 Transcript Type= NA chr14 73962693 74019332 73962693 74019332 - ENST00000334696.10@ENTPD5 ENST00000334696.10 protein_coding 74019250,74015824,74011091,73987886,73986814,73983018,73977299,73977024,73976324,73975936,73974924,73973877,73972884,73971852,73970010,73962693 74019332,74015930,74011150,73988172,73986893,73983161,73977374,73977059,73976412,73976015,73974985,73973978,73973024,73971908,73970125,73967014 Gene ID= ENSG00000187097.12 TPM= 5.43 Transcript Type= protein_coding chr14 74056850 74084493 74056850 74084493 - ENST00000553458.5@ALDH6A1 ENST00000553458.5 protein_coding 74084347,74074955,74072537,74072203,74071896,74071195,74068860,74067380,74066705,74065181,74064822,74056850 74084493,74075017,74072611,74072364,74071974,74071497,74068981,74067569,74066886,74065360,74064920,74060746 Gene ID= ENSG00000119711.12 TPM= 88.74 Transcript Type= protein_coding chr14 74084943 74201232 74084943 74201232 + transcript1839.chr14.nnic@LIN52 transcript1839.chr14.nnic protein_coding 74084943,74091232,74095948,74097794,74101155,74198922,74200201 74084993,74091306,74095985,74097860,74101238,74200065,74201232 Gene ID= ENSG00000205659.10 TPM= 5.43 Transcript Type= NA chr14 74285967 74302973 74285967 74302973 - transcript1845.chr14.nic@ABCD4 transcript1845.chr14.nic protein_coding 74302875,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285967 74302973,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529 Gene ID= ENSG00000119688.20 TPM= 7.24 Transcript Type= NA chr14 74285972 74302997 74285972 74302997 - transcript1850.chr14.nic@ABCD4 transcript1850.chr14.nic protein_coding 74302875,74300150,74299548,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74285972 74302997,74300268,74299675,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816 Gene ID= ENSG00000119688.20 TPM= 18.11 Transcript Type= NA chr14 74285967 74302993 74285967 74302993 - transcript1857.chr14.nic@ABCD4 transcript1857.chr14.nic protein_coding 74302875,74300150,74297930,74296333,74295854,74295148,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286701,74285967 74302993,74300268,74298069,74296449,74295979,74295198,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816,74286529 Gene ID= ENSG00000119688.20 TPM= 4.98 Transcript Type= NA chr14 74285972 74302996 74285972 74302996 - transcript1865.chr14.nic@ABCD4 transcript1865.chr14.nic protein_coding 74302875,74300150,74297930,74296333,74295854,74295148,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74285972 74302996,74300268,74298069,74296449,74295979,74295198,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816 Gene ID= ENSG00000119688.20 TPM= 3.62 Transcript Type= NA chr14 74286014 74302937 74286014 74302937 - ENST00000481935.5@ABCD4 ENST00000481935.5 protein_coding 74302875,74300150,74297930,74296333,74295854,74295148,74293154,74292748,74292551,74292287,74290291,74290027,74289483,74288716,74288207,74287810,74286014 74302937,74300268,74298069,74296449,74295979,74295198,74293248,74292869,74292642,74292376,74290499,74290118,74289519,74288765,74288259,74287886,74286816 Gene ID= ENSG00000119688.20 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr14 74479933 74493512 74479933 74493512 - ENST00000555619.5@NPC2 ENST00000555619.5 protein_coding 74493193,74486329,74484415,74480702,74479933 74493512,74486436,74484587,74480779,74480288 Gene ID= ENSG00000119655.10 TPM= 265.32 Transcript Type= protein_coding chr14 74498170 74612331 74498170 74612331 - ENST00000261978.8@LTBP2 ENST00000261978.8 protein_coding 74611451,74603635,74585854,74555503,74552892,74552187,74551064,74549863,74535926,74532426,74528958,74528483,74527347,74526075,74525124,74522790,74521911,74516822,74511245,74510091,74509734,74509238,74508830,74508604,74507973,74507179,74506698,74506048,74504983,74504778,74503926,74503469,74503219,74502653,74501441,74498170 74612331,74603705,74586118,74555693,74553062,74552393,74551350,74549965,74536000,74532548,74529122,74528698,74527366,74526114,74525225,74522918,74522039,74516941,74511364,74510213,74509859,74509363,74508952,74508729,74508095,74507310,74506823,74506191,74505174,74504861,74504054,74503606,74503386,74502934,74501590,74501029 Gene ID= ENSG00000119681.11 TPM= 11.77 Transcript Type= protein_coding chr14 74661252 74713115 74661252 74713115 - ENST00000356357.8@AREL1 ENST00000356357.8 protein_coding 74712933,74692041,74685600,74684454,74683296,74676583,74676141,74675699,74674034,74673077,74672831,74671408,74670762,74669947,74669649,74667465,74667319,74664836,74663899,74661252 74713115,74692328,74685660,74684680,74683533,74676752,74676321,74675946,74674111,74673218,74672952,74671483,74670871,74670126,74669774,74667594,74667377,74664925,74664074,74663822 Gene ID= ENSG00000119682.16 TPM= 16.3 Transcript Type= protein_coding chr14 74763366 74836190 74763366 74836190 + ENST00000552421.5@YLPM1 ENST00000552421.5 protein_coding 74763366,74778447,74780405,74781334,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74824256,74829213,74835265,74835775 74764362,74778683,74780584,74782325,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74824307,74829343,74835447,74836190 Gene ID= ENSG00000119596.17 TPM= 3.17 Transcript Type= protein_coding chr14 74763366 74836281 74763366 74836281 + ENST00000325680.11@YLPM1 ENST00000325680.11 protein_coding 74763366,74778447,74780405,74781334,74797580,74802556,74809380,74809910,74810225,74811620,74812628,74816203,74816571,74816931,74817194,74818231,74821057,74824256,74829213,74835265,74835775 74764362,74778683,74780584,74782325,74799697,74802676,74809797,74810002,74810420,74811738,74812782,74816265,74816690,74817107,74817277,74818314,74821137,74824307,74829343,74835447,74836281 Gene ID= ENSG00000119596.17 TPM= 13.13 Transcript Type= protein_coding chr14 74881893 74903745 74881893 74903745 + ENST00000334220.8@DLST ENST00000334220.8 protein_coding 74881893,74882591,74885586,74889095,74889275,74889897,74891056,74892834,74893348,74894312,74898369,74899923,74900289,74901066,74902196 74882016,74882624,74885634,74889147,74889349,74889952,74891167,74892986,74893424,74894409,74898499,74899996,74900372,74901233,74903745 Gene ID= ENSG00000119689.14 TPM= 20.83 Transcript Type= protein_coding chr14 74941841 74955626 74941841 74955626 - ENST00000553716.5@PGF ENST00000553716.5 protein_coding 74955168,74953904,74949357,74948507,74946379,74941841 74955626,74953946,74949553,74948583,74946408,74942733 Gene ID= ENSG00000119630.13 TPM= 1.81 Transcript Type= protein_coding chr14 75013764 75051532 75013764 75051532 - ENST00000355774.6@MLH3 ENST00000355774.6 protein_coding 75051380,75046376,75042379,75041615,75039911,75038340,75033419,75032068,75030543,75022995,75022814,75018829,75013764 75051532,75049718,75042477,75041700,75040015,75038412,75033490,75032179,75030702,75023018,75022892,75018980,75017201 Gene ID= ENSG00000119684.15 TPM= 9.96 Transcript Type= protein_coding chr14 75016356 75051504 75016356 75051504 - transcript1907.chr14.nic@MLH3 transcript1907.chr14.nic protein_coding 75051380,75046376,75042379,75041615,75038340,75033419,75032068,75030543,75022995,75022814,75018829,75016356 75051504,75049718,75042477,75041700,75038412,75033490,75032179,75030702,75023018,75022892,75018980,75017201 Gene ID= ENSG00000119684.15 TPM= 3.62 Transcript Type= NA chr14 75016785 75051498 75016785 75051498 - transcript1908.chr14.nic@MLH3 transcript1908.chr14.nic protein_coding 75051439,75046376,75042379,75041615,75038340,75033419,75032068,75030543,75022995,75022814,75018829,75016785 75051498,75049718,75042477,75041700,75038412,75033490,75032179,75030702,75023018,75022892,75018980,75017201 Gene ID= ENSG00000119684.15 TPM= 1.81 Transcript Type= NA chr14 75013769 75051532 75013769 75051532 - ENST00000380968.6@MLH3 ENST00000380968.6 protein_coding 75051380,75046376,75042379,75041615,75039911,75038340,75032068,75030543,75022995,75022814,75018829,75013769 75051532,75049718,75042477,75041700,75040015,75038412,75032179,75030702,75023018,75022892,75018980,75017201 Gene ID= ENSG00000119684.15 TPM= 3.62 Transcript Type= protein_coding chr14 75016779 75051504 75016779 75051504 - transcript1912.chr14.nic@MLH3 transcript1912.chr14.nic protein_coding 75051380,75046376,75042379,75041615,75038340,75032068,75030543,75022995,75022814,75018829,75016779 75051504,75049718,75042477,75041700,75038412,75032179,75030702,75023018,75022892,75018980,75017201 Gene ID= ENSG00000119684.15 TPM= 5.43 Transcript Type= NA chr14 75053221 75064049 75053221 75064049 - ENST00000238618.7@ACYP1 ENST00000238618.7 protein_coding 75063954,75063470,75053221 75064049,75063561,75053659 Gene ID= ENSG00000119640.8 TPM= 12.68 Transcript Type= protein_coding chr14 75053243 75064015 75053243 75064015 - ENST00000357971.7@ACYP1 ENST00000357971.7 protein_coding 75063954,75063470,75061684,75053243 75064015,75063561,75061762,75053659 Gene ID= ENSG00000119640.8 TPM= 1.81 Transcript Type= protein_coding chr14 75069280 75079987 75069280 75079987 + ENST00000524913.2@ZC2HC1C ENST00000524913.2 protein_coding 75069280,75070555,75077532 75069749,75071911,75079987 Gene ID= ENSG00000119703.13 TPM= 1.81 Transcript Type= protein_coding chr14 75079353 75127080 75079353 75127080 - ENST00000238616.9@NEK9 ENST00000238616.9 protein_coding 75126703,75124046,75121119,75120510,75118830,75117195,75114203,75113339,75110321,75109685,75107343,75106502,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088480,75087018,75079353 75127080,75124223,75121174,75120580,75118935,75117326,75114313,75113403,75110371,75109877,75107487,75106702,75105996,75103997,75101765,75101153,75097270,75095431,75091478,75088641,75087230,75084686 Gene ID= ENSG00000119638.12 TPM= 10.41 Transcript Type= protein_coding chr14 75084223 75106361 75084223 75106361 - transcript1928.chr14.nnic@NEK9 transcript1928.chr14.nnic protein_coding 75106096,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088476,75087018,75084223 75106361,75105996,75103999,75101765,75101153,75097270,75095431,75091481,75088645,75087230,75084688 Gene ID= ENSG00000119638.12 TPM= 2.72 Transcript Type= NA chr14 75082121 75117245 75082121 75117245 - ENST00000557026.5@NEK9 ENST00000557026.5 protein_coding 75117195,75114203,75113339,75110321,75109685,75107343,75105950,75103842,75101657,75100992,75097100,75095372,75091270,75088480,75087018,75082121 75117245,75114313,75113403,75110371,75109877,75107487,75106702,75103997,75101765,75101153,75097270,75095431,75091478,75088641,75087230,75084686 Gene ID= ENSG00000119638.12 TPM= 37.58 Transcript Type= retained_intron chr14 75131470 75176631 75131470 75176631 - ENST00000303575.8@TMED10 ENST00000303575.8 protein_coding 75176355,75152032,75147664,75135760,75131470 75176631,75152143,75147737,75135886,75135006 Gene ID= ENSG00000170348.8 TPM= 350.45 Transcript Type= protein_coding chr14 75278774 75282230 75278774 75282230 + ENST00000303562.8@FOS ENST00000303562.8 protein_coding 75278774,75279877,75280560,75280783 75279123,75280128,75280667,75282230 Gene ID= ENSG00000170345.9 TPM= 136.74 Transcript Type= protein_coding chr14 75428020 75470456 75428020 75470456 + transcript1943.chr14.nnic@JDP2 transcript1943.chr14.nnic protein_coding 75428020,75432118,75437898,75461426,75469290 75428252,75432336,75438121,75461530,75470456 Gene ID= ENSG00000140044.12 TPM= 9.96 Transcript Type= NA chr14 75522425 75547015 75522425 75547015 + ENST00000286639.6@BATF ENST00000286639.6 protein_coding 75522425,75525084,75546462 75522745,75525188,75547015 Gene ID= ENSG00000156127.6 TPM= 4.53 Transcript Type= protein_coding chr14 75578596 75648164 75578596 75648164 + transcript1955.chr14.nic@FLVCR2 transcript1955.chr14.nic protein_coding 75578596,75622079,75624612,75634910,75639352,75640955,75641182,75641843,75646401 75579641,75622220,75624752,75635013,75639462,75641060,75641293,75641898,75648164 Gene ID= ENSG00000119686.9 TPM= 2.72 Transcript Type= NA chr14 75578617 75648167 75578617 75648167 + ENST00000238667.8@FLVCR2 ENST00000238667.8 protein_coding 75578617,75622079,75624612,75633629,75634910,75639352,75640955,75641182,75641843,75646401 75579641,75622220,75624752,75633696,75635013,75639462,75641060,75641293,75641898,75648167 Gene ID= ENSG00000119686.9 TPM= 27.17 Transcript Type= protein_coding chr14 75661246 75954828 75661246 75954828 + transcript1960.chr14.nic@TTLL5 transcript1960.chr14.nic protein_coding 75661246,75663055,75669416,75681545,75683550,75690192,75699188,75707018,75707623,75717861,75719735,75720596,75732338,75733989,75735195,75745095,75745490,75752893,75764615,75766062,75771734,75775484,75776747,75779575,75782487,75783147,75792913,75820007,75863667,75882685,75902142,75954424 75661637,75663223,75669522,75681627,75683656,75690322,75699270,75707087,75707707,75717962,75719826,75720703,75732419,75734050,75735289,75745208,75745581,75752955,75764772,75766368,75771854,75775630,75776850,75779702,75782573,75783530,75793100,75820161,75863862,75882902,75902224,75954828 Gene ID= ENSG00000119685.19 TPM= 2.72 Transcript Type= NA chr14 75649791 75661189 75649791 75661189 - ENST00000256319.6@ERG28 ENST00000256319.6 protein_coding 75660775,75657370,75654886,75651771,75649791 75661189,75657533,75654976,75651889,75651634 Gene ID= ENSG00000133935.6 TPM= 103.23 Transcript Type= protein_coding chr14 75985753 76083749 75985753 76083749 + ENST00000314067.10@IFT43 ENST00000314067.10 protein_coding 75985753,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458 75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083749 Gene ID= ENSG00000119650.12 TPM= 26.26 Transcript Type= protein_coding chr14 75985784 76083750 75985784 76083750 + transcript1967.chr14.nnic@IFT43 transcript1967.chr14.nnic protein_coding 75985784,75988885,76022327,76058642,76059327,76082295,76082617,76083227,76083458 75985955,75988977,76022394,76058674,76059373,76082367,76082692,76083289,76083750 Gene ID= ENSG00000119650.12 TPM= 1.81 Transcript Type= NA chr14 75985756 76083749 75985756 76083749 + transcript1976.chr14.nic@IFT43 transcript1976.chr14.nic protein_coding 75985756,75988885,76022327,76058642,76059327,76082295,76082617,76083227 75985840,75988977,76022394,76058674,76059373,76082367,76082692,76083749 Gene ID= ENSG00000119650.12 TPM= 1.81 Transcript Type= NA chr14 75985783 76083750 75985783 76083750 + transcript1979.chr14.nnic@IFT43 transcript1979.chr14.nnic protein_coding 75985783,75988885,76022327,76082295,76082617,76083227,76083458 75986308,75988977,76022394,76082367,76082692,76083289,76083750 Gene ID= ENSG00000119650.12 TPM= 1.81 Transcript Type= NA chr14 75985784 76059271 75985784 76059271 + ENST00000556742.1@IFT43 ENST00000556742.1 protein_coding 75985784,75988885,76022327,76058642 75985840,75988977,76022394,76059271 Gene ID= ENSG00000119650.12 TPM= 3.62 Transcript Type= protein_coding chr14 75958088 75981980 75958088 75981980 - transcript1968.chr14.nnic@TGFB3 transcript1968.chr14.nnic protein_coding 75981038,75980542,75971555,75971126,75965588,75963316,75960923,75958088 75981980,75980689,75971718,75971255,75965695,75963487,75961076,75959345 Gene ID= ENSG00000119699.7 TPM= 6.11 Transcript Type= NA chr14 75958088 75981976 75958088 75981976 - transcript1969.chr14.nnic@TGFB3 transcript1969.chr14.nnic protein_coding 75981038,75980542,75971555,75971126,75965588,75963316,75960923,75958088 75981976,75980931,75971718,75971255,75965695,75963487,75961076,75959345 Gene ID= ENSG00000119699.7 TPM= 7.02 Transcript Type= NA chr14 75958099 75981995 75958099 75981995 - transcript1974.chr14.nic@TGFB3 transcript1974.chr14.nic protein_coding 75980542,75971555,75971126,75965588,75963316,75960923,75960269,75958099 75981995,75971718,75971255,75965695,75963487,75961076,75960386,75959345 Gene ID= ENSG00000119699.7 TPM= 6.57 Transcript Type= NA chr14 75958202 75981191 75958202 75981191 - ENST00000238682.7@TGFB3 ENST00000238682.7 protein_coding 75980542,75971555,75971126,75965588,75963316,75960923,75958202 75981191,75971718,75971255,75965695,75963487,75961076,75959345 Gene ID= ENSG00000119699.7 TPM= 2.04 Transcript Type= protein_coding chr14 76151916 76199528 76151916 76199528 + transcript1988.chr14.nic@GPATCH2L transcript1988.chr14.nic protein_coding 76151916,76154354,76166663,76171843,76173546,76176623,76177988,76180764,76195878 76151991,76155025,76166727,76172019,76173625,76176690,76178042,76180849,76199528 Gene ID= ENSG00000089916.17 TPM= 11.77 Transcript Type= NA chr14 76151916 76175516 76151916 76175516 + transcript1989.chr14.nic@GPATCH2L transcript1989.chr14.nic protein_coding 76151916,76154354,76166663,76171843,76173546 76151991,76155025,76166727,76172019,76175516 Gene ID= ENSG00000089916.17 TPM= 1.81 Transcript Type= NA chr14 76781740 76812932 76781740 76812932 - transcript1991.chr14.nic@ANGEL1 transcript1991.chr14.nic protein_coding 76812764,76809059,76807922,76807433,76806416,76803786,76803371,76791297,76790611,76786085,76781740 76812932,76809643,76808148,76807502,76806849,76803912,76803481,76791366,76790774,76789388,76782776 Gene ID= ENSG00000013523.9 TPM= 2.72 Transcript Type= NA chr14 76786178 76812940 76786178 76812940 - ENST00000251089.6@ANGEL1 ENST00000251089.6 protein_coding 76812764,76809059,76807922,76807433,76806416,76803786,76803371,76791297,76790611,76786178 76812940,76809643,76808148,76807502,76806849,76803912,76803481,76791366,76790774,76789388 Gene ID= ENSG00000013523.9 TPM= 55.24 Transcript Type= protein_coding chr14 77098097 77117287 77098097 77117287 + ENST00000361786.6@CIPC ENST00000361786.6 protein_coding 77098097,77105657,77109812,77113425 77098361,77105844,77109981,77117287 Gene ID= ENSG00000198894.7 TPM= 31.69 Transcript Type= protein_coding chr14 77274958 77320871 77274958 77320871 - transcript2010.chr14.nnic@POMT2 transcript2010.chr14.nnic protein_coding 77320434,77311949,77306337,77304692,77302835,77299455,77298689,77296164,77291314,77288762,77286744,77285481,77284950,77283797,77280392,77280021,77279823,77278729,77278394,77274958 77320871,77312033,77306441,77304800,77302943,77299561,77298771,77296273,77291380,77288831,77286822,77285632,77285041,77283873,77280463,77280080,77279928,77278869,77278508,77277481 Gene ID= ENSG00000009830.11 TPM= 4.07 Transcript Type= NA chr14 77274956 77320884 77274956 77320884 - ENST00000261534.8@POMT2 ENST00000261534.8 protein_coding 77320434,77311949,77306337,77304692,77302835,77301090,77299455,77298689,77296164,77291314,77288762,77286744,77285481,77284950,77283797,77280392,77280021,77279823,77278729,77278394,77274956 77320884,77312033,77306441,77304800,77302943,77301249,77299561,77298771,77296273,77291380,77288831,77286822,77285632,77285041,77283873,77280463,77280080,77279928,77278869,77278508,77277481 Gene ID= ENSG00000009830.11 TPM= 18.56 Transcript Type= protein_coding chr14 77320884 77331597 77320884 77331597 + ENST00000216465.9@GSTZ1 ENST00000216465.9 protein_coding 77320884,77324870,77326838,77327472,77327912,77329123,77329755,77330310,77331069 77321183,77324921,77326905,77327552,77328037,77329201,77329807,77330359,77331597 Gene ID= ENSG00000100577.18 TPM= 38.94 Transcript Type= protein_coding chr14 77335021 77377109 77335021 77377109 - ENST00000216468.7@TMED8 ENST00000216468.7 protein_coding 77376936,77351673,77346349,77343697,77343178,77335021 77377109,77351751,77346478,77343823,77343483,77341988 Gene ID= ENSG00000100580.7 TPM= 9.96 Transcript Type= protein_coding chr14 77426682 77457640 77426682 77457640 - ENST00000557658.5@VIPAS39 ENST00000557658.5 protein_coding 77457495,77454010,77453299,77451187,77449714,77449293,77448494,77444249,77443119,77442560,77441066,77437808,77435844,77435259,77434262,77433842,77429681,77429006,77428370,77426682 77457640,77454102,77453401,77451333,77449752,77449357,77448550,77444341,77443152,77442662,77441093,77437881,77435919,77435393,77434303,77433931,77429767,77429095,77428474,77427636 Gene ID= ENSG00000151445.15 TPM= 13.58 Transcript Type= protein_coding chr14 77458030 77469474 77458030 77469474 + ENST00000216479.7@AHSA1 ENST00000216479.7 protein_coding 77458030,77459616,77462160,77462642,77464598,77465539,77468083,77468457,77469077 77458269,77459806,77462242,77462759,77464686,77465667,77468184,77468508,77469474 Gene ID= ENSG00000100591.7 TPM= 110.48 Transcript Type= protein_coding chr14 77505997 77616773 77505997 77616773 - ENST00000216484.6@SPTLC2 ENST00000216484.6 protein_coding 77616448,77597186,77578955,77576767,77570384,77562396,77557041,77555300,77552096,77521446,77518038,77505997 77616773,77597380,77579109,77576915,77570508,77562489,77557146,77555519,77552222,77521581,77518167,77512403 Gene ID= ENSG00000100596.6 TPM= 33.51 Transcript Type= protein_coding chr14 77673038 77708032 77673038 77708032 - transcript2032.chr14.nic@ALKBH1 transcript2032.chr14.nic protein_coding 77707822,77704369,77694738,77679880,77675656,77673038 77708032,77704477,77694900,77679970,77675794,77674241 Gene ID= ENSG00000100601.9 TPM= 3.62 Transcript Type= NA chr14 77708071 77717594 77708071 77717594 + ENST00000613856.4@SLIRP ENST00000613856.4 protein_coding 77708071,77710838,77715772,77717480 77708208,77710896,77715879,77717594 Gene ID= ENSG00000119705.9 TPM= 2.11 Transcript Type= protein_coding chr14 77708071 77717598 77708071 77717598 + ENST00000557342.5@SLIRP ENST00000557342.5 protein_coding 77708071,77710838,77715772,77717496 77708208,77710896,77715879,77717598 Gene ID= ENSG00000119705.9 TPM= 110.78 Transcript Type= protein_coding chr14 77708114 77717593 77708114 77717593 + ENST00000555890.5@SLIRP ENST00000555890.5 protein_coding 77708114,77710555,77710838,77715772,77717496 77708208,77710665,77710896,77715879,77717593 Gene ID= ENSG00000119705.9 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr14 77708079 77717598 77708079 77717598 + ENST00000238688.9@SLIRP ENST00000238688.9 protein_coding 77708079,77710838,77715772,77717502 77708208,77710896,77715879,77717598 Gene ID= ENSG00000119705.9 TPM= 2.11 Transcript Type= protein_coding chr14 77717599 77761190 77717599 77761190 - ENST00000261531.11@SNW1 ENST00000261531.11 protein_coding 77761114,77754967,77751319,77738966,77738778,77736971,77735937,77734947,77732485,77730988,77723181,77720711,77718367,77717599 77761190,77755120,77751480,77739061,77738884,77737075,77736006,77735012,77732601,77731129,77723277,77720828,77718530,77718286 Gene ID= ENSG00000100603.13 TPM= 64.29 Transcript Type= protein_coding chr14 77717601 77761189 77717601 77761189 - transcript2037.chr14.nnic@SNW1 transcript2037.chr14.nnic protein_coding 77761114,77754967,77751319,77738966,77738778,77736971,77735937,77734947,77732485,77730988,77720711,77718367,77717601 77761189,77755120,77751480,77739061,77738884,77737075,77736006,77735012,77732601,77731129,77720828,77718530,77718286 Gene ID= ENSG00000100603.13 TPM= 2.72 Transcript Type= NA chr14 77800083 77933954 77800083 77933954 + ENST00000238561.9@ADCK1 ENST00000238561.9 protein_coding 77800083,77818968,77822435,77859076,77887091,77899100,77907803,77924457,77925764,77931518,77933220 77800170,77819113,77822518,77859279,77887249,77899258,77907919,77924606,77925961,77931711,77933954 Gene ID= ENSG00000063761.15 TPM= 14.49 Transcript Type= protein_coding chr14 80496478 80941785 80496478 80941785 - ENST00000555265.5@CEP128 ENST00000555265.5 protein_coding 80941581,80939385,80916401,80914322,80905955,80904813,80899938,80895718,80862757,80840682,80838204,80836205,80831143,80792760,80784895,80777882,80761437,80756892,80743075,80580374,80559279,80530809,80526869,80504912,80496478 80941785,80939540,80916562,80914408,80906081,80904931,80900029,80895790,80862873,80840768,80838278,80836337,80831294,80793110,80785545,80778046,80761613,80756951,80743267,80580423,80559302,80530886,80526982,80505020,80497582 Gene ID= ENSG00000100629.16 TPM= 1.81 Transcript Type= protein_coding chr14 81472920 81533888 81472920 81533888 - transcript2052.chr14.nic@SEL1L transcript2052.chr14.nic protein_coding 81533675,81527701,81526733,81506074,81504201,81502721,81499609,81499459,81498413,81497892,81495081,81492480,81490388,81489252,81487855,81487390,81486289,81485672,81484225,81479612,81472920 81533888,81527738,81526964,81506178,81504306,81502883,81499662,81499518,81498494,81498046,81495137,81492548,81490465,81489314,81487942,81487538,81486454,81485746,81484397,81479740,81477181 Gene ID= ENSG00000071537.13 TPM= 8.15 Transcript Type= NA chr14 87933014 87993271 87933014 87993271 - ENST00000261304.6@GALC ENST00000261304.6 protein_coding 87992970,87988455,87988144,87986489,87984394,87982205,87976358,87968335,87965505,87963384,87950659,87949845,87947728,87945553,87941395,87939905,87933014 87993271,87988523,87988207,87986602,87984533,87982243,87976488,87968490,87965629,87963511,87950748,87949931,87947878,87945733,87941558,87939981,87934878 Gene ID= ENSG00000054983.16 TPM= 47.09 Transcript Type= protein_coding chr14 88005124 88014811 88005124 88014811 + ENST00000267549.4@GPR65 ENST00000267549.4 protein_coding 88005124,88010389 88005222,88014811 Gene ID= ENSG00000140030.5 TPM= 5.43 Transcript Type= protein_coding chr14 88385530 88438456 88385530 88438456 + ENST00000393545.8@SPATA7 ENST00000393545.8 protein_coding 88385530,88391381,88393393,88396156,88416711,88426232,88427630,88429348,88431172,88433135,88437543,88437838 88385837,88391455,88393488,88396203,88416844,88426704,88427696,88429463,88431225,88433212,88437597,88438456 Gene ID= ENSG00000042317.16 TPM= 11.32 Transcript Type= protein_coding chr14 88384924 88438460 88384924 88438460 + ENST00000556553.5@SPATA7 ENST00000556553.5 protein_coding 88384924,88385398,88391381,88396156,88416711,88426232,88427630,88429348,88431172,88433135,88437543,88437838 88385061,88385837,88391455,88396203,88416844,88426704,88427696,88429463,88431225,88433212,88437597,88438460 Gene ID= ENSG00000042317.16 TPM= 4.98 Transcript Type= protein_coding chr14 88562909 88627596 88562909 88627596 + ENST00000251038.9@ZC3H14 ENST00000251038.9 protein_coding 88562909,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88601924,88602828,88607243,88609267,88609712,88610834,88611745 88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88602083,88603060,88607363,88609403,88609803,88610940,88627596 Gene ID= ENSG00000100722.18 TPM= 13.74 Transcript Type= protein_coding chr14 88563031 88615448 88563031 88615448 + transcript2083.chr14.nic@ZC3H14 transcript2083.chr14.nic protein_coding 88563031,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88601924,88602828,88607243,88609267,88609712,88610834,88611745 88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88602083,88603045,88607363,88609403,88609803,88610940,88615448 Gene ID= ENSG00000100722.18 TPM= 2.19 Transcript Type= NA chr14 88563020 88615448 88563020 88615448 + transcript2091.chr14.nic@ZC3H14 transcript2091.chr14.nic protein_coding 88563020,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88607243,88609267,88609715,88610834,88611745 88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88607363,88609403,88609803,88610940,88615448 Gene ID= ENSG00000100722.18 TPM= 3.1 Transcript Type= NA chr14 88562963 88615448 88562963 88615448 + transcript2093.chr14.nic@ZC3H14 transcript2093.chr14.nic protein_coding 88562963,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88607243,88609267,88609712,88610834,88611745 88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88607363,88609403,88609803,88610940,88615448 Gene ID= ENSG00000100722.18 TPM= 5.81 Transcript Type= NA chr14 88563010 88611884 88563010 88611884 + ENST00000556945.5@ZC3H14 ENST00000556945.5 protein_coding 88563010,88563651,88568039,88571084,88572030,88572578,88574693,88575840,88577985,88596734,88607243,88609267,88609712,88610834,88611745 88563169,88563693,88568153,88571124,88572225,88573007,88574853,88575940,88578140,88596808,88607363,88609403,88609803,88610940,88611884 Gene ID= ENSG00000100722.18 TPM= 3.78 Transcript Type= protein_coding chr14 88824595 88877987 88824595 88877987 + transcript2104.chr14.nic@TTC8 transcript2104.chr14.nic protein_coding 88824595,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88877294 88824821,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88877987 Gene ID= ENSG00000165533.18 TPM= 3.32 Transcript Type= NA chr14 88824153 88877995 88824153 88877995 + ENST00000536576.5@TTC8 ENST00000536576.5 protein_coding 88824153,88824574,88839452,88840865,88841037,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88875026,88877294 88824214,88824821,88839572,88840928,88841196,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88875109,88877995 Gene ID= ENSG00000165533.18 TPM= 24.6 Transcript Type= protein_coding chr14 88824153 88877995 88824153 88877995 + ENST00000345383.9@TTC8 ENST00000345383.9 protein_coding 88824153,88824574,88833693,88839452,88840865,88841037,88841425,88843806,88852971,88857190,88861222,88870059,88871549,88872330,88875026,88877294 88824214,88824821,88833722,88839572,88840928,88841196,88841514,88843850,88853056,88857277,88861332,88870198,88871723,88872452,88875109,88877995 Gene ID= ENSG00000165533.18 TPM= 3.78 Transcript Type= protein_coding chr14 89161148 89619268 89161148 89619268 - transcript2111.chr14.nic@FOXN3 transcript2111.chr14.nic protein_coding 89619028,89486569,89411934,89350672,89280950,89190384,89180701,89161148 89619268,89486671,89412490,89350808,89281014,89190449,89180806,89162969 Gene ID= ENSG00000053254.15 TPM= 3.92 Transcript Type= NA chr14 89161148 89417229 89161148 89417229 - transcript2112.chr14.nic@FOXN3 transcript2112.chr14.nic protein_coding 89416871,89411934,89350672,89280950,89190384,89180701,89161148 89417229,89412490,89350808,89281014,89190449,89180806,89162969 Gene ID= ENSG00000053254.15 TPM= 12.98 Transcript Type= NA chr14 89161148 89619180 89161148 89619180 - transcript2113.chr14.nic@FOXN3 transcript2113.chr14.nic protein_coding 89619028,89486569,89411934,89350672,89280950,89180701,89161148 89619180,89486671,89412490,89350808,89281014,89180806,89162969 Gene ID= ENSG00000053254.15 TPM= 5.73 Transcript Type= NA chr14 89262452 89417229 89262452 89417229 - transcript2117.chr14.nic@FOXN3 transcript2117.chr14.nic protein_coding 89416871,89411934,89350672,89280950,89262452 89417229,89412490,89350808,89281014,89264055 Gene ID= ENSG00000053254.15 TPM= 2.72 Transcript Type= NA chr14 89161385 89417112 89161385 89417112 - ENST00000557258.5@FOXN3 ENST00000557258.5 protein_coding 89416871,89411934,89350672,89280950,89180701,89161385 89417112,89412490,89350808,89281014,89180806,89162969 Gene ID= ENSG00000053254.15 TPM= 4.53 Transcript Type= protein_coding chr14 89794669 89954689 89794669 89954689 - ENST00000316738.11@EFCAB11 ENST00000316738.11 protein_coding 89954586,89953906,89950097,89932526,89931541,89794669 89954689,89954001,89950142,89932627,89931631,89797324 Gene ID= ENSG00000140025.15 TPM= 3.62 Transcript Type= protein_coding chr14 89955975 90044769 89955975 90044769 + transcript2130.chr14.nnic@TDP1 transcript2130.chr14.nnic protein_coding 89955975,89966147,89967367,89971175,89975781,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070 89956278,89966190,89967422,89971271,89975815,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90044769 Gene ID= ENSG00000042088.13 TPM= 1.81 Transcript Type= NA chr14 89955951 90044768 89955951 90044768 + ENST00000335725.8@TDP1 ENST00000335725.8 protein_coding 89955951,89956578,89963108,89966147,89967367,89971175,89975781,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070 89955970,89956800,89963673,89966190,89967422,89971271,89975815,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90044768 Gene ID= ENSG00000042088.13 TPM= 4.98 Transcript Type= protein_coding chr14 89955938 90043344 89955938 90043344 + ENST00000393454.6@TDP1 ENST00000393454.6 protein_coding 89955938,89963108,89966147,89967367,89971175,89975781,89980540,89984516,89985132,89988905,89989717,89991917,89993376,90019316,90033106,90043070 89955970,89963673,89966190,89967422,89971271,89975815,89980632,89984683,89985210,89989090,89989765,89991983,89993483,90019418,90033214,90043344 Gene ID= ENSG00000042088.13 TPM= 3.17 Transcript Type= protein_coding chr14 90061765 90185857 90061765 90185857 + ENST00000282146.4@KCNK13 ENST00000282146.4 protein_coding 90061765,90184111 90062539,90185857 Gene ID= ENSG00000152315.4 TPM= 2.72 Transcript Type= protein_coding chr14 90256495 90275429 90256495 90275429 + ENST00000261303.12@PSMC1 ENST00000261303.12 protein_coding 90256495,90259160,90260115,90263318,90263662,90264041,90265070,90268224,90269397,90270198,90272273 90256600,90259213,90260211,90263442,90263847,90264169,90265166,90268413,90269548,90270352,90275429 Gene ID= ENSG00000100764.13 TPM= 143.08 Transcript Type= protein_coding chr14 90276236 90332125 90276236 90332125 - transcript2136.chr14.nnic@NRDE2 transcript2136.chr14.nnic protein_coding 90331841,90318005,90316578,90312394,90303935,90302720,90301239,90298260,90297014,90292697,90290221,90288217,90286354,90279062,90276236 90332125,90318113,90316811,90312543,90304382,90303125,90301372,90298380,90297131,90292872,90290607,90289145,90286492,90279133,90278461 Gene ID= ENSG00000119720.17 TPM= 2.26 Transcript Type= NA chr14 90267856 90332137 90267856 90332137 - ENST00000354366.7@NRDE2 ENST00000354366.7 protein_coding 90331841,90318005,90316578,90312394,90303935,90302720,90301239,90298260,90292697,90290221,90288217,90286354,90279062,90267856 90332137,90318113,90316811,90312543,90304382,90303125,90301372,90298380,90292872,90290607,90289145,90286492,90279133,90278461 Gene ID= ENSG00000119720.17 TPM= 11.32 Transcript Type= protein_coding chr14 90396983 90408261 90396983 90408261 + ENST00000356978.8@CALM1 ENST00000356978.8 protein_coding 90396983,90400065,90401259,90403862,90404379,90404689 90397233,90400095,90401402,90403968,90404514,90408261 Gene ID= ENSG00000198668.10 TPM= 582.27 Transcript Type= protein_coding chr14 90540590 90816541 90540590 90816541 - transcript2153.chr14.nic@TTC7B transcript2153.chr14.nic protein_coding 90816175,90786174,90780738,90744792,90730075,90695500,90689540,90680472,90676523,90658304,90657174,90654993,90652841,90646951,90644048,90617929,90610742,90593486,90540590 90816541,90786328,90780906,90744922,90730196,90695578,90689712,90680535,90676660,90658387,90657278,90655110,90652898,90647023,90644208,90618045,90610839,90593626,90541589 Gene ID= ENSG00000165914.14 TPM= 2.72 Transcript Type= NA chr14 91114039 91225626 91114039 91225626 + transcript2170.chr14.nic@C14orf159 transcript2170.chr14.nic protein_coding 91114039,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114283,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225626 Gene ID= ENSG00000133943.20 TPM= 8 Transcript Type= NA chr14 91114039 91226929 91114039 91226929 + transcript2180.chr14.nic@C14orf159 transcript2180.chr14.nic protein_coding 91114039,91145221,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114283,91145313,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91226929 Gene ID= ENSG00000133943.20 TPM= 5.28 Transcript Type= NA chr14 91114039 91225352 91114039 91225352 + transcript2194.chr14.nic@C14orf159 transcript2194.chr14.nic protein_coding 91114039,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114283,91157690,91160397,91167378,91170186,91173403,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225352 Gene ID= ENSG00000133943.20 TPM= 7.3 Transcript Type= NA chr14 91114039 91225626 91114039 91225626 + transcript2196.chr14.nic@C14orf159 transcript2196.chr14.nic protein_coding 91114039,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114283,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225626 Gene ID= ENSG00000133943.20 TPM= 26.11 Transcript Type= NA chr14 91114374 91225352 91114374 91225352 + transcript2206.chr14.nic@C14orf159 transcript2206.chr14.nic protein_coding 91114374,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114528,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225352 Gene ID= ENSG00000133943.20 TPM= 4.01 Transcript Type= NA chr14 91114039 91225352 91114039 91225352 + transcript2212.chr14.nic@C14orf159 transcript2212.chr14.nic protein_coding 91114039,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91215405,91224684 91114283,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91215556,91225352 Gene ID= ENSG00000133943.20 TPM= 5.43 Transcript Type= NA chr14 91114063 91225632 91114063 91225632 + ENST00000256324.14@C14orf159 ENST00000256324.14 protein_coding 91114063,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114283,91157690,91160397,91167378,91170201,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225632 Gene ID= ENSG00000133943.20 TPM= 55.63 Transcript Type= protein_coding chr14 91114390 91225355 91114390 91225355 + ENST00000523816.5@C14orf159 ENST00000523816.5 protein_coding 91114390,91145221,91147781,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114528,91145313,91147858,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225355 Gene ID= ENSG00000133943.20 TPM= 4.37 Transcript Type= protein_coding chr14 91114442 91225352 91114442 91225352 + ENST00000428926.6@C14orf159 ENST00000428926.6 protein_coding 91114442,91157639,91160266,91167225,91170003,91173289,91175934,91181186,91188910,91196375,91199757,91204706,91215405,91224684 91114528,91157690,91160397,91167378,91170186,91173439,91176056,91181389,91189170,91196474,91199905,91204825,91215556,91225352 Gene ID= ENSG00000133943.20 TPM= 3.47 Transcript Type= protein_coding chr14 91457619 91510484 91457619 91510484 - transcript2222.chr14.nic@PPP4R3A transcript2222.chr14.nic protein_coding 91509506,91490747,91485632,91481576,91476909,91476408,91475811,91473239,91473033,91470837,91466261,91465250,91462735,91462049,91461381,91457619 91510484,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91466416,91465419,91462877,91462239,91461607,91458869 Gene ID= ENSG00000100796.17 TPM= 2.42 Transcript Type= NA chr14 91457614 91510556 91457614 91510556 - transcript2223.chr14.nic@PPP4R3A transcript2223.chr14.nic protein_coding 91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91466261,91465250,91462735,91462049,91461381,91457614 91510556,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91466416,91465419,91462877,91462239,91461607,91458869 Gene ID= ENSG00000100796.17 TPM= 7.85 Transcript Type= NA chr14 91457619 91510298 91457619 91510298 - transcript2227.chr14.nic@PPP4R3A transcript2227.chr14.nic protein_coding 91510075,91509506,91490747,91485632,91481576,91476909,91476408,91475850,91473239,91473033,91470837,91465250,91462735,91462049,91461381,91457619 91510298,91509704,91490802,91485730,91482193,91476986,91476524,91475966,91473370,91473135,91470995,91465419,91462877,91462239,91461607,91458869 Gene ID= ENSG00000100796.17 TPM= 3.32 Transcript Type= NA chr14 91869412 91947938 91869412 91947938 - transcript2243.chr14.nnic@FBLN5 transcript2243.chr14.nnic protein_coding 91947213,91942907,91940565,91936947,91894950,91891221,91887193,91882954,91881292,91877487,91873497,91869412 91947938,91942961,91940616,91937201,91895072,91891337,91887312,91883076,91881418,91877682,91873675,91870385 Gene ID= ENSG00000140092.14 TPM= 8.15 Transcript Type= NA chr14 91965991 92040059 91965991 92040059 - ENST00000267622.8@TRIP11 ENST00000267622.8 protein_coding 92039547,92033192,92025310,92021556,92017682,92015696,92014215,92011755,92010986,92007640,92003419,91999968,91999240,91995352,91993809,91988284,91976108,91975172,91974627,91972717,91965991 92040059,92033253,92025420,92021831,92017750,92015861,92014577,92011795,92011072,92007852,92006448,92000108,91999433,91995515,91993912,91988383,91976189,91975286,91974743,91972861,91969893 Gene ID= ENSG00000100815.12 TPM= 10.87 Transcript Type= protein_coding chr14 92038652 92106610 92038652 92106610 - ENST00000558190.5@ATXN3 ENST00000558190.5 protein_coding 92106529,92096674,92096093,92093746,92093252,92088730,92083126,92082300,92080965,92070935,92038652 92106610,92096838,92096137,92093831,92093318,92088817,92083258,92082466,92081061,92071053,92064414 Gene ID= ENSG00000066427.21 TPM= 8.15 Transcript Type= protein_coding chr14 92116122 92121724 92116122 92121724 - ENST00000553514.5@NDUFB1 ENST00000553514.5 protein_coding 92121642,92118849,92117498,92116122 92121724,92118966,92117642,92116229 Gene ID= ENSG00000183648.9 TPM= 52.52 Transcript Type= protein_coding chr14 92513774 92688994 92513774 92688994 + ENST00000216487.11@RIN3 ENST00000216487.11 protein_coding 92513774,92555751,92577360,92615407,92641238,92651582,92659161,92676475,92684987,92687926 92513976,92555955,92577477,92615479,92641329,92653075,92659469,92676606,92685150,92688994 Gene ID= ENSG00000100599.15 TPM= 39.84 Transcript Type= protein_coding chr14 92513804 92515507 92513804 92515507 + ENST00000557762.1@RIN3 ENST00000557762.1 protein_coding 92513804,92515164 92513976,92515507 Gene ID= ENSG00000100599.15 TPM= 3.62 Transcript Type= protein_coding chr14 92703809 92748702 92703809 92748702 - ENST00000334869.8@LGMN ENST00000334869.8 protein_coding 92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92706483,92704640,92703809 92748702,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92706653,92704707,92704361 Gene ID= ENSG00000100600.14 TPM= 146.7 Transcript Type= protein_coding chr14 92703839 92748645 92703839 92748645 - ENST00000557434.5@LGMN ENST00000557434.5 protein_coding 92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92704640,92703839 92748645,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92704707,92704361 Gene ID= ENSG00000100600.14 TPM= 9.06 Transcript Type= protein_coding chr14 92703807 92748612 92703807 92748612 - ENST00000555699.5@LGMN ENST00000555699.5 protein_coding 92748489,92732649,92718747,92717380,92716136,92714376,92713823,92712805,92711837,92711659,92709672,92703807 92748612,92732815,92718844,92717461,92716221,92714451,92713885,92712871,92711955,92711748,92709872,92704361 Gene ID= ENSG00000100600.14 TPM= 2.26 Transcript Type= protein_coding chr14 92794321 92839827 92794321 92839827 + transcript2288.chr14.nnic@GOLGA5 transcript2288.chr14.nnic protein_coding 92794321,92797408,92806736,92809121,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92839366 92794456,92797981,92806963,92809179,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92839827 Gene ID= ENSG00000066455.12 TPM= 1.81 Transcript Type= NA chr14 92794340 92839827 92794340 92839827 + transcript2292.chr14.nic@GOLGA5 transcript2292.chr14.nic protein_coding 92794340,92797408,92806736,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92839366 92794456,92797981,92806963,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92839827 Gene ID= ENSG00000066455.12 TPM= 1.81 Transcript Type= NA chr14 92794231 92839963 92794231 92839963 + ENST00000163416.6@GOLGA5 ENST00000163416.6 protein_coding 92794231,92797408,92806736,92809300,92810254,92811551,92816251,92819708,92824546,92833122,92835559,92837386,92839366 92794456,92797981,92806963,92809519,92810377,92811754,92816421,92819836,92824644,92833347,92835664,92837449,92839963 Gene ID= ENSG00000066455.12 TPM= 72.44 Transcript Type= protein_coding chr14 92923080 92935293 92923080 92935293 + ENST00000216492.9@CHGA ENST00000216492.9 protein_coding 92923080,92924199,92926605,92927550,92929717,92931250,92932370,92934801 92923405,92924245,92926698,92927618,92929815,92931702,92932851,92935293 Gene ID= ENSG00000100604.12 TPM= 46.18 Transcript Type= protein_coding chr14 92926626 92935228 92926626 92935228 + transcript2296.chr14.nnic@CHGA transcript2296.chr14.nnic protein_coding 92926626,92931454,92932543,92935115 92926659,92931460,92932630,92935228 Gene ID= ENSG00000100604.12 TPM= 2.72 Transcript Type= NA chr14 92923176 92935253 92923176 92935253 + ENST00000334654.4@CHGA ENST00000334654.4 protein_coding 92923176,92924199,92926605,92927550,92929717,92932370,92934801 92923405,92924245,92926698,92927618,92929815,92932851,92935253 Gene ID= ENSG00000100604.12 TPM= 1.81 Transcript Type= protein_coding chr14 92939724 93115914 92939724 93115914 - transcript2302.chr14.nic@ITPK1 transcript2302.chr14.nic protein_coding 93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939724 93115914,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904 Gene ID= ENSG00000100605.16 TPM= 28.52 Transcript Type= NA chr14 92939753 93115871 92939753 93115871 - ENST00000556603.6@ITPK1 ENST00000556603.6 protein_coding 93115772,93115069,93076595,93016676,92993880,92962751,92962355,92958201,92951946,92946331,92939753 93115871,93115184,93076619,93016801,92993997,92962849,92962395,92958366,92952013,92946493,92941904 Gene ID= ENSG00000100605.16 TPM= 14.04 Transcript Type= protein_coding chr14 93182199 93184923 93182199 93184923 - ENST00000556883.1@MOAP1 ENST00000556883.1 protein_coding 93184559,93182199 93184923,93184362 Gene ID= ENSG00000165943.4 TPM= 8.15 Transcript Type= protein_coding chr14 93182196 93184928 93182196 93184928 - ENST00000298894.4@MOAP1 ENST00000298894.4 protein_coding 93184810,93184559,93182196 93184928,93184713,93184362 Gene ID= ENSG00000165943.4 TPM= 84.22 Transcript Type= protein_coding chr14 93184951 93187086 93184951 93187086 + ENST00000283534.4@TMEM251 ENST00000283534.4 protein_coding 93184951,93186260 93185032,93187086 Gene ID= ENSG00000153485.5 TPM= 16.3 Transcript Type= protein_coding chr14 93185013 93187089 93185013 93187089 + ENST00000415050.2@TMEM251 ENST00000415050.2 protein_coding 93185013,93186260 93185485,93187089 Gene ID= ENSG00000153485.5 TPM= 8.15 Transcript Type= protein_coding chr14 93202894 93207094 93202894 93207094 - ENST00000306954.4@GON7 ENST00000306954.4 protein_coding 93206830,93202894 93207094,93203782 Gene ID= ENSG00000170270.4 TPM= 15.39 Transcript Type= protein_coding chr14 93207056 93229215 93207056 93229215 + ENST00000013070.10@UBR7 ENST00000013070.10 protein_coding 93207056,93209824,93210648,93212032,93214929,93215176,93218527,93219212,93220249,93222313,93226943 93207441,93209957,93210708,93212127,93214982,93215281,93218735,93219361,93220411,93222374,93229215 Gene ID= ENSG00000012963.14 TPM= 35.32 Transcript Type= protein_coding chr14 93207226 93229209 93207226 93229209 + transcript2309.chr14.nic@UBR7 transcript2309.chr14.nic protein_coding 93207226,93209824,93210648,93214929,93215176,93218527,93219212,93220249,93222313,93226943 93207441,93209957,93210708,93214982,93215281,93218735,93219361,93220411,93222374,93229209 Gene ID= ENSG00000012963.14 TPM= 4.53 Transcript Type= NA chr14 93287628 93333092 93287628 93333092 - ENST00000298896.7@BTBD7 ENST00000298896.7 protein_coding 93332820,93295970,93293858,93287628 93333092,93296157,93294937,93288707 Gene ID= ENSG00000011114.14 TPM= 1.81 Transcript Type= protein_coding chr14 94026329 94048930 94026329 94048930 + ENST00000203664.9@OTUB2 ENST00000203664.9 protein_coding 94026329,94037380,94038963,94043971,94044586,94045716 94026540,94037475,94039081,94044055,94044780,94048930 Gene ID= ENSG00000089723.9 TPM= 4.53 Transcript Type= protein_coding chr14 94048291 94081245 94048291 94081245 - ENST00000621632.4@DDX24 ENST00000621632.4 protein_coding 94081119,94079025,94062097,94060913,94060098,94057822,94054996,94052998,94048291 94081245,94079747,94062621,94061066,94060613,94057897,94055184,94053127,94051462 Gene ID= ENSG00000089737.16 TPM= 501.22 Transcript Type= protein_coding chr14 94050965 94081202 94050965 94081202 - ENST00000555054.1@DDX24 ENST00000555054.1 protein_coding 94081119,94079025,94062097,94060913,94060098,94057822,94054996,94052998,94050965 94081202,94079621,94062621,94061066,94060613,94057897,94055184,94053127,94051462 Gene ID= ENSG00000089737.16 TPM= 3.62 Transcript Type= protein_coding chr14 94050920 94081198 94050920 94081198 - ENST00000555762.1@DDX24 ENST00000555762.1 protein_coding 94081119,94079025,94062097,94060913,94060098,94054996,94052998,94050920 94081198,94079747,94062621,94061066,94060613,94057897,94053127,94051462 Gene ID= ENSG00000089737.16 TPM= 4.07 Transcript Type= retained_intron chr14 94081311 94102713 94081311 94102713 + transcript2326.chr14.nic@IFI27L1 transcript2326.chr14.nic protein_coding 94081311,94096887,94097495,94100739,94101814,94102477 94081449,94096965,94097678,94100771,94101975,94102713 Gene ID= ENSG00000165948.10 TPM= 3.02 Transcript Type= NA chr14 94081282 94102714 94081282 94102714 + ENST00000555523.5@IFI27L1 ENST00000555523.5 protein_coding 94081282,94096887,94100739,94101814,94102477 94081449,94096965,94100771,94101975,94102714 Gene ID= ENSG00000165948.10 TPM= 20.22 Transcript Type= protein_coding chr14 94081311 94102709 94081311 94102709 + transcript2328.chr14.nic@IFI27L1 transcript2328.chr14.nic protein_coding 94081311,94096887,94100739,94101814,94102477 94081449,94096965,94100771,94102059,94102709 Gene ID= ENSG00000165948.10 TPM= 2.72 Transcript Type= NA chr14 94081329 94102709 94081329 94102709 + ENST00000393115.7@IFI27L1 ENST00000393115.7 protein_coding 94081329,94096841,94100739,94101814,94102477 94081449,94096965,94100771,94101975,94102709 Gene ID= ENSG00000165948.10 TPM= 2.11 Transcript Type= protein_coding chr14 94081382 94102709 94081382 94102709 + ENST00000557218.5@IFI27L1 ENST00000557218.5 protein_coding 94081382,94096887,94100739,94102477 94081449,94096965,94100771,94102709 Gene ID= ENSG00000165948.10 TPM= 1.81 Transcript Type= protein_coding chr14 94109664 94116698 94109664 94116698 + transcript2335.chr14.nnic@IFI27 transcript2335.chr14.nnic protein_coding 94109664,94110678,94111659,94114851,94115781,94116442 94109885,94110797,94111773,94114880,94115942,94116698 Gene ID= ENSG00000165949.12 TPM= 49.2 Transcript Type= NA chr14 94110749 94116695 94110749 94116695 + ENST00000621160.4@IFI27 ENST00000621160.4 protein_coding 94110749,94111625,94114851,94115781,94116442 94110797,94111773,94114880,94115942,94116695 Gene ID= ENSG00000165949.12 TPM= 27.01 Transcript Type= protein_coding chr14 94110734 94116690 94110734 94116690 + ENST00000618863.1@IFI27 ENST00000618863.1 protein_coding 94110734,94114851,94115781,94116442 94110797,94114880,94115942,94116690 Gene ID= ENSG00000165949.12 TPM= 16.15 Transcript Type= protein_coding chr14 94127781 94129664 94127781 94129664 - ENST00000238609.3@IFI27L2 ENST00000238609.3 protein_coding 94129558,94129262,94128514,94127781 94129664,94129291,94128675,94127992 Gene ID= ENSG00000119632.3 TPM= 109.12 Transcript Type= protein_coding chr14 94127779 94129401 94127779 94129401 - ENST00000555558.1@IFI27L2 ENST00000555558.1 protein_coding 94129262,94128514,94127779 94129401,94128675,94127992 Gene ID= ENSG00000119632.3 TPM= 11.32 Transcript Type= retained_intron chr14 94581423 94593137 94581423 94593137 + transcript2360.chr14.nic@SERPINA5 transcript2360.chr14.nic protein_coding 94581423,94581615,94587346,94590041,94590749,94592057 94581490,94581638,94587981,94590311,94590896,94593137 Gene ID= ENSG00000188488.13 TPM= 172.27 Transcript Type= NA chr14 94581394 94593115 94581394 94593115 + ENST00000554866.5@SERPINA5 ENST00000554866.5 protein_coding 94581394,94587346,94590041,94590749,94592057 94581490,94587981,94590311,94590896,94593115 Gene ID= ENSG00000188488.13 TPM= 872.26 Transcript Type= protein_coding chr14 94581369 94593120 94581369 94593120 + ENST00000329597.11@SERPINA5 ENST00000329597.11 protein_coding 94581369,94581615,94587346,94590041,94590749,94592057 94581490,94581710,94587981,94590311,94590896,94593120 Gene ID= ENSG00000188488.13 TPM= 630.48 Transcript Type= protein_coding chr14 94592058 94624646 94592058 94624646 + ENST00000553947.1@AL049839.2 ENST00000553947.1 protein_coding 94592058,94596255,94598090,94612297,94614434,94619195,94622341,94623611 94592136,94596857,94598211,94612447,94615084,94619468,94622491,94624646 Gene ID= ENSG00000273259.3 TPM= 6.18 Transcript Type= nonsense_mediated_decay chr14 94612391 94624054 94612391 94624054 + ENST00000467132.5@SERPINA3 ENST00000467132.5 protein_coding 94612391,94613347,94619195,94622341,94623611 94612443,94615084,94619468,94622491,94624054 Gene ID= ENSG00000196136.17 TPM= 1.2 Transcript Type= protein_coding chr14 94612384 94624055 94612384 94624055 + ENST00000393080.8@SERPINA3 ENST00000393080.8 protein_coding 94612384,94614434,94619195,94622341,94623611 94612443,94615084,94619468,94622491,94624055 Gene ID= ENSG00000196136.17 TPM= 1.66 Transcript Type= protein_coding chr14 95532914 95534872 95532914 95534872 - ENST00000553559.1@SNHG10 ENST00000553559.1 antisense_RNA 95534593,95532914 95534872,95533061 Gene ID= ENSG00000247092.6 TPM= 3.62 Transcript Type= antisense_RNA chr14 96204844 96244165 96204844 96244165 + transcript2405.chr14.nnic@BDKRB2 transcript2405.chr14.nnic protein_coding 96204844,96237074,96240403,96243046,96243322 96204959,96237181,96242985,96243245,96244165 Gene ID= ENSG00000168398.6 TPM= 1.81 Transcript Type= NA chr14 96279202 96363870 96279202 96363870 - ENST00000359933.5@ATG2B ENST00000359933.5 protein_coding 96362815,96347179,96345233,96344654,96343119,96341522,96334405,96333688,96332501,96332305,96331376,96329484,96328674,96328347,96325649,96323896,96322540,96322112,96317698,96317145,96316533,96315384,96315154,96313329,96313065,96312089,96311542,96311117,96309453,96306714,96305589,96304495,96303061,96302007,96295482,96294960,96292029,96291600,96290814,96290436,96289656,96279202 96363870,96347341,96345385,96344756,96343281,96341701,96334501,96333873,96332655,96332410,96331637,96329634,96328766,96328535,96325922,96323998,96322735,96322254,96317855,96317317,96316683,96315583,96315234,96313435,96313157,96312159,96311618,96311287,96309594,96306916,96305815,96304603,96303255,96302108,96295560,96295167,96292098,96291682,96290935,96290590,96289805,96285985 Gene ID= ENSG00000066739.11 TPM= 2.72 Transcript Type= protein_coding chr14 96363477 96387288 96363477 96387288 + ENST00000555181.5@GSKIP ENST00000555181.5 protein_coding 96363477,96379688,96382247,96385523 96363568,96379788,96382505,96387288 Gene ID= ENSG00000100744.14 TPM= 36.22 Transcript Type= protein_coding chr14 96392111 96489427 96392111 96489427 + ENST00000267584.8@AK7 ENST00000267584.8 protein_coding 96392111,96398075,96404757,96408847,96420822,96437835,96442730,96446517,96449802,96451421,96456347,96458083,96471478,96472687,96478465,96482999,96486898,96488305 96392259,96398263,96404865,96408941,96420932,96437915,96442818,96446607,96449879,96451570,96456475,96458212,96471606,96472755,96478662,96483219,96487056,96489427 Gene ID= ENSG00000140057.8 TPM= 1.81 Transcript Type= protein_coding chr14 96502370 96567083 96502370 96567083 + transcript2418.chr14.nic@PAPOLA transcript2418.chr14.nic protein_coding 96502370,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96564955 96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96567083 Gene ID= ENSG00000090060.17 TPM= 24.45 Transcript Type= NA chr14 96502373 96567111 96502373 96567111 + ENST00000216277.12@PAPOLA ENST00000216277.12 protein_coding 96502373,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511,96534491,96535879,96536976,96542243,96542774,96544149,96547797,96552480,96555847,96556175,96560649,96562819,96564955 96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96532649,96534563,96535999,96537060,96542296,96542893,96544258,96547918,96552622,96555947,96556413,96560711,96562893,96567111 Gene ID= ENSG00000090060.17 TPM= 121.34 Transcript Type= protein_coding chr14 96502401 96534885 96502401 96534885 + ENST00000557320.5@PAPOLA ENST00000557320.5 protein_coding 96502401,96520055,96521006,96525310,96527430,96527953,96531475,96532331,96532511 96502600,96520228,96521072,96525391,96527539,96528006,96531586,96532420,96534885 Gene ID= ENSG00000090060.17 TPM= 50.71 Transcript Type= protein_coding chr14 96502441 96532248 96502441 96532248 + ENST00000557471.5@PAPOLA ENST00000557471.5 protein_coding 96502441,96520055,96521006,96525310,96527430,96527953,96531475 96502600,96520228,96521072,96525391,96527539,96528006,96532248 Gene ID= ENSG00000090060.17 TPM= 5.43 Transcript Type= protein_coding chr14 96797304 96881613 96797304 96881613 + ENST00000216639.7@VRK1 ENST00000216639.7 protein_coding 96797304,96833467,96837762,96846095,96847257,96852831,96853074,96855224,96856130,96856528,96860557,96876030,96881177 96797447,96833631,96837817,96846164,96847344,96852939,96853166,96855356,96856250,96856586,96860735,96876120,96881613 Gene ID= ENSG00000100749.7 TPM= 7.24 Transcript Type= protein_coding chr14 99397746 99480916 99397746 99480916 - transcript2428.chr14.nic@SETD3 transcript2428.chr14.nic protein_coding 99480728,99465703,99463486,99459113,99458279,99413876,99412951,99406516,99405205,99404225,99400099,99397746 99480916,99465813,99463578,99459185,99458535,99413934,99413065,99406590,99405371,99404310,99400259,99399125 Gene ID= ENSG00000183576.12 TPM= 3.62 Transcript Type= NA chr14 99397746 99480879 99397746 99480879 - ENST00000331768.9@SETD3 ENST00000331768.9 protein_coding 99480728,99465703,99463486,99461192,99459113,99458279,99413876,99412951,99406516,99405205,99404225,99400099,99397746 99480879,99465813,99463578,99461340,99459185,99458535,99413934,99413065,99406590,99405371,99404310,99400259,99399125 Gene ID= ENSG00000183576.12 TPM= 55.24 Transcript Type= protein_coding chr14 99511265 99604198 99511265 99604198 - transcript2431.chr14.nnic@CCDC85C transcript2431.chr14.nnic protein_coding 99603167,99536015,99528218,99522133,99517088,99516188,99511265 99604198,99536088,99528256,99522240,99517183,99516286,99515335 Gene ID= ENSG00000205476.8 TPM= 17.21 Transcript Type= NA chr14 99684314 99727301 99684314 99727301 + ENST00000261835.7@CYP46A1 ENST00000261835.7 protein_coding 99684314,99691081,99691780,99699466,99700015,99706647,99707568,99715810,99716137,99718054,99721239,99721956,99725391,99726190,99726557 99684536,99691161,99691861,99699539,99700101,99706785,99707678,99715960,99716199,99718126,99721323,99722066,99725479,99726256,99727301 Gene ID= ENSG00000036530.8 TPM= 5.43 Transcript Type= protein_coding chr14 99737687 99942056 99737687 99942056 + transcript2445.chr14.nic@EML1 transcript2445.chr14.nic protein_coding 99737687,99850853,99865514,99878485,99891199,99894629,99897145,99898233,99900929,99907638,99909345,99910242,99911422,99914179,99914566,99917782,99920789,99936029,99936247,99937817,99939197,99939987 99737860,99851035,99865646,99878619,99891227,99894758,99897294,99898302,99901039,99907733,99909479,99910341,99911576,99914304,99914697,99917849,99920877,99936126,99936334,99937912,99939327,99942056 Gene ID= ENSG00000066629.16 TPM= 17.21 Transcript Type= NA chr14 99971449 100144236 99971449 100144236 + ENST00000402714.6@EVL ENST00000402714.6 protein_coding 99971449,100084687,100097481,100123539,100126707,100128519,100129563,100132719,100135905,100137578,100137740,100141180,100141736,100143701 99972057,100084855,100097658,100123602,100126771,100128748,100129684,100132779,100135968,100137644,100137802,100141246,100141793,100144236 Gene ID= ENSG00000196405.12 TPM= 14.49 Transcript Type= protein_coding chr14 100238985 100282792 100238985 100282792 + ENST00000262238.8@YY1 ENST00000262238.8 protein_coding 100238985,100262304,100274698,100276490,100277418 100239923,100262466,100274758,100276648,100282792 Gene ID= ENSG00000100811.12 TPM= 76.97 Transcript Type= protein_coding chr14 100291111 100297639 100291111 100297639 - transcript2481.chr14.nnic@SLC25A29 transcript2481.chr14.nnic protein_coding 100297089,100293294,100291111 100297639,100296659,100293032 Gene ID= ENSG00000197119.12 TPM= 11.95 Transcript Type= NA chr14 100291111 100306533 100291111 100306533 - ENST00000359232.7@SLC25A29 ENST00000359232.7 protein_coding 100306199,100298842,100293294,100291111 100306533,100298885,100293377,100293032 Gene ID= ENSG00000197119.12 TPM= 124.92 Transcript Type= protein_coding chr14 100333787 100376308 100333787 100376308 - transcript2486.chr14.nic@WARS transcript2486.chr14.nic protein_coding 100376260,100375283,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333787 100376308,100375350,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036 Gene ID= ENSG00000140105.17 TPM= 12.02 Transcript Type= NA chr14 100333788 100375644 100333788 100375644 - ENST00000392882.6@WARS ENST00000392882.6 protein_coding 100375283,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333788 100375644,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036 Gene ID= ENSG00000140105.17 TPM= 29.22 Transcript Type= protein_coding chr14 100333787 100375615 100333787 100375615 - transcript2489.chr14.nnic@WARS transcript2489.chr14.nnic protein_coding 100375511,100369087,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333787 100375615,100369258,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036 Gene ID= ENSG00000140105.17 TPM= 7.18 Transcript Type= NA chr14 100333802 100376335 100333802 100376335 - ENST00000358655.8@WARS ENST00000358655.8 protein_coding 100376260,100361708,100360554,100354447,100353687,100346746,100343275,100342398,100337062,100333802 100376335,100361921,100360662,100354566,100353869,100346846,100343387,100342571,100337202,100335036 Gene ID= ENSG00000140105.17 TPM= 11.35 Transcript Type= protein_coding chr14 100376439 100530303 100376439 100530303 + ENST00000402312.7@WDR25 ENST00000402312.7 protein_coding 100376439,100380910,100468021,100483994,100525870,100529068,100529820 100376495,100381746,100468168,100484124,100526040,100529208,100530303 Gene ID= ENSG00000176473.13 TPM= 16.3 Transcript Type= protein_coding chr14 100726909 100735127 100726909 100735127 + ENST00000331224.10@DLK1 ENST00000331224.10 protein_coding 100726909,100728396,100728936,100732042,100734149,100734648 100727135,100728459,100729066,100732183,100734428,100735127 Gene ID= ENSG00000185559.13 TPM= 143.08 Transcript Type= protein_coding chr14 100826116 100861029 100826116 100861029 + transcript2579.chr14.nic@MEG3 transcript2579.chr14.nic lincRNA 100826116,100828708,100829034,100831016,100836167,100845458,100860691 100826217,100828816,100829749,100831094,100836300,100845533,100861029 Gene ID= ENSG00000214548.14 TPM= 36.85 Transcript Type= NA chr14 100826116 100861029 100826116 100861029 + transcript2614.chr14.nic@MEG3 transcript2614.chr14.nic lincRNA 100826116,100828708,100829034,100836167,100845458,100860691 100826217,100828816,100835879,100836300,100845533,100861029 Gene ID= ENSG00000214548.14 TPM= 32.47 Transcript Type= NA chr14 100826126 100861031 100826126 100861031 + ENST00000451743.6@MEG3 ENST00000451743.6 lincRNA 100826126,100828708,100829034,100831421,100836167,100845458,100860691 100826217,100828816,100829749,100831534,100836300,100845533,100861031 Gene ID= ENSG00000214548.14 TPM= 284.67 Transcript Type= lincRNA chr14 100826108 100861023 100826108 100861023 + ENST00000429159.6@MEG3 ENST00000429159.6 lincRNA 100826108,100828708,100829034,100832512,100836167,100845458,100860691 100826217,100828816,100829749,100832641,100836300,100845533,100861023 Gene ID= ENSG00000214548.14 TPM= 89.07 Transcript Type= lincRNA chr14 100826132 100861026 100826132 100861026 + ENST00000554639.5@MEG3 ENST00000554639.5 lincRNA 100826132,100828708,100829034,100831421,100835739,100836167,100845458,100860691 100826217,100828816,100829749,100831534,100835879,100836300,100845533,100861026 Gene ID= ENSG00000214548.14 TPM= 40.17 Transcript Type= lincRNA chr14 100826148 100860977 100826148 100860977 + ENST00000412736.6@MEG3 ENST00000412736.6 lincRNA 100826148,100828708,100829034,100831016,100835736,100836167,100845458,100860691 100826217,100828816,100829749,100831094,100835879,100836300,100845533,100860977 Gene ID= ENSG00000214548.14 TPM= 47.99 Transcript Type= lincRNA chr14 100826134 100861008 100826134 100861008 + ENST00000519709.5@MEG3 ENST00000519709.5 lincRNA 100826134,100828708,100829034,100831421,100835739,100836042,100836167,100845458,100860691 100826217,100828816,100829749,100831534,100835879,100836075,100836300,100845533,100861008 Gene ID= ENSG00000214548.14 TPM= 3.62 Transcript Type= lincRNA chr14 100826126 100860989 100826126 100860989 + ENST00000521404.5@MEG3 ENST00000521404.5 lincRNA 100826126,100828708,100829034,100836167,100845458,100860691 100826217,100828816,100829749,100836300,100845533,100860989 Gene ID= ENSG00000214548.14 TPM= 48.9 Transcript Type= lincRNA chr14 100826126 100847306 100826126 100847306 + ENST00000424076.7@MEG3 ENST00000424076.7 lincRNA 100826126,100828708,100829034,100831421,100836167,100845458,100845876 100826217,100828816,100829749,100831534,100836300,100845533,100847306 Gene ID= ENSG00000214548.14 TPM= 16.6 Transcript Type= lincRNA chr14 100826126 100860970 100826126 100860970 + ENST00000423456.5@MEG3 ENST00000423456.5 lincRNA 100826126,100828708,100829034,100831421,100832512,100834632,100836167,100845458,100860691 100826217,100828816,100829749,100831534,100832641,100834751,100836300,100845533,100860970 Gene ID= ENSG00000214548.14 TPM= 8.15 Transcript Type= lincRNA chr14 100832969 100861021 100832969 100861021 + ENST00000398461.5@MEG3 ENST00000398461.5 lincRNA 100832969,100836167,100845458,100860691 100835879,100836300,100845533,100861021 Gene ID= ENSG00000214548.14 TPM= 199.09 Transcript Type= lincRNA chr14 101557304 101560375 101557304 101560375 - ENST00000554441.5@DIO3OS ENST00000554441.5 lincRNA 101560252,101559800,101558633,101557304 101560375,101560025,101558834,101557819 Gene ID= ENSG00000258498.8 TPM= 1.81 Transcript Type= lincRNA chr14 101761709 101927989 101761709 101927989 + transcript2646.chr14.nic@PPP2R5C transcript2646.chr14.nic protein_coding 101761709,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101917831,101925141 101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101917947,101927989 Gene ID= ENSG00000078304.19 TPM= 6.34 Transcript Type= NA chr14 101761637 101912623 101761637 101912623 + transcript2650.chr14.nic@PPP2R5C transcript2650.chr14.nic protein_coding 101761637,101762905,101786018,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401 101761920,101762970,101786183,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912623 Gene ID= ENSG00000078304.19 TPM= 10.87 Transcript Type= NA chr14 101809803 101927519 101809803 101927519 + ENST00000350249.7@PPP2R5C ENST00000350249.7 protein_coding 101809803,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101925141 101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101927519 Gene ID= ENSG00000078304.19 TPM= 11.77 Transcript Type= protein_coding chr14 101809895 101927977 101809895 101927977 + ENST00000334743.9@PPP2R5C ENST00000334743.9 protein_coding 101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401,101917831,101925141 101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912473,101917947,101927977 Gene ID= ENSG00000078304.19 TPM= 25.36 Transcript Type= protein_coding chr14 101809895 101912625 101809895 101912625 + ENST00000445439.7@PPP2R5C ENST00000445439.7 protein_coding 101809895,101856686,101882161,101883257,101883432,101890237,101893000,101894507,101901719,101906402,101909589,101912401 101810036,101856885,101882271,101883349,101883562,101890296,101893108,101894560,101901889,101906529,101909690,101912625 Gene ID= ENSG00000078304.19 TPM= 16.3 Transcript Type= protein_coding chr14 101964528 102050791 101964528 102050791 + ENST00000360184.8@DYNC1H1 ENST00000360184.8 protein_coding 101964528,101975712,101979319,101979719,101980364,101983019,101983382,101985687,101987453,101988703,101991527,101994184,101994673,101994986,101995181,101997035,101999989,102000286,102000954,102001145,102001535,102002537,102002792,102004518,102004762,102005042,102005888,102007008,102008178,102009843,102010276,102010740,102011875,102012314,102015105,102015856,102016349,102016766,102017088,102017383,102018451,102019893,102022751,102026574,102027174,102027383,102027619,102027937,102029539,102029819,102030162,102032272,102033065,102033269,102033976,102034325,102036489,102038460,102038698,102039001,102039412,102039638,102040236,102040598,102041574,102042013,102042228,102042384,102042635,102043875,102044274,102044595,102047817,102048516,102049440,102049714,102050071,102050435 101964947,101975799,101979492,101979974,101980550,101983290,101983609,101986763,101987632,101988852,101991673,101994324,101994849,101995096,101995300,101997274,102000144,102000399,102001064,102001354,102001681,102002703,102002965,102004683,102004950,102005236,102006170,102007108,102008337,102010086,102010459,102010952,102012113,102012470,102015332,102016086,102016489,102016999,102017294,102017504,102018616,102020056,102022880,102026707,102027288,102027544,102027833,102028141,102029712,102029938,102030282,102032467,102033182,102033484,102034188,102034452,102036642,102038606,102038848,102039254,102039546,102039732,102040410,102040673,102041734,102042124,102042288,102042507,102042748,102044045,102044491,102044698,102048028,102048669,102049582,102049882,102050198,102050791 Gene ID= ENSG00000197102.10 TPM= 3.62 Transcript Type= protein_coding chr14 102015242 102050798 102015242 102050798 + transcript2665.chr14.nic@DYNC1H1 transcript2665.chr14.nic protein_coding 102015242,102015856,102016349,102016766,102017088,102017383,102018451,102019893,102022751,102026574,102027174,102027383,102027619,102027937,102029539,102029819,102030162,102032272,102033065,102033269,102033976,102034325,102036489,102038460,102038698,102039001,102039412,102039638,102040236,102040598,102041574,102042013,102042228,102042384,102042635,102043875,102044274,102044595,102047817,102048516,102049440,102049714,102050071,102050435 102015332,102016086,102016489,102016999,102017294,102017504,102018616,102020056,102022880,102026707,102027288,102027544,102027833,102028141,102029712,102029938,102030282,102032467,102033182,102033484,102034188,102034452,102036642,102038606,102038848,102039254,102039546,102039732,102040410,102040673,102041734,102042124,102042288,102042507,102042748,102044045,102044491,102044698,102048028,102048669,102049582,102049882,102050198,102050798 Gene ID= ENSG00000197102.10 TPM= 38.03 Transcript Type= NA chr14 102080738 102087191 102080738 102087191 - ENST00000216281.12@HSP90AA1 ENST00000216281.12 protein_coding 102086986,102086217,102085758,102085298,102084681,102084399,102083793,102083546,102083034,102082111,102080738 102087191,102086378,102086124,102085431,102084998,102084564,102083983,102083693,102083302,102082444,102081821 Gene ID= ENSG00000080824.18 TPM= 533.37 Transcript Type= protein_coding chr14 102081049 102139686 102081049 102139686 - ENST00000334701.11@HSP90AA1 ENST00000334701.11 protein_coding 102139250,102101875,102086217,102085758,102085298,102084681,102084399,102083793,102083546,102083034,102082111,102081049 102139686,102102085,102086378,102086124,102085431,102084998,102084564,102083983,102083693,102083302,102082444,102081821 Gene ID= ENSG00000080824.18 TPM= 51.62 Transcript Type= protein_coding chr14 102139889 102223672 102139889 102223672 + transcript2668.chr14.nnic@WDR20 transcript2668.chr14.nnic protein_coding 102139889,102193463,102194938,102208603,102221557,102222830 102140172,102193514,102195120,102209862,102221658,102223672 Gene ID= ENSG00000140153.17 TPM= 1.81 Transcript Type= NA chr14 102139839 102223672 102139839 102223672 + transcript2669.chr14.nnic@WDR20 transcript2669.chr14.nnic protein_coding 102139839,102194938,102208603,102221557,102222830 102140172,102195120,102209862,102221658,102223672 Gene ID= ENSG00000140153.17 TPM= 3.62 Transcript Type= NA chr14 102139898 102223672 102139898 102223672 + transcript2672.chr14.nnic@WDR20 transcript2672.chr14.nnic protein_coding 102139898,102194938,102221557,102222830 102140172,102195120,102221658,102223672 Gene ID= ENSG00000140153.17 TPM= 1.81 Transcript Type= NA chr14 102139889 102210523 102139889 102210523 + transcript2673.chr14.nic@WDR20 transcript2673.chr14.nic protein_coding 102139889,102193463,102194938,102208603 102140172,102193514,102195120,102210523 Gene ID= ENSG00000140153.17 TPM= 3.62 Transcript Type= NA chr14 102139894 102210523 102139894 102210523 + transcript2676.chr14.nic@WDR20 transcript2676.chr14.nic protein_coding 102139894,102194938,102208862 102140172,102195120,102210523 Gene ID= ENSG00000140153.17 TPM= 2.72 Transcript Type= NA chr14 102139839 102223675 102139839 102223675 + transcript2677.chr14.nic@WDR20 transcript2677.chr14.nic protein_coding 102139839,102194938,102222830 102140172,102195120,102223675 Gene ID= ENSG00000140153.17 TPM= 4.53 Transcript Type= NA chr14 102139884 102223538 102139884 102223538 + transcript2679.chr14.nnic@WDR20 transcript2679.chr14.nnic protein_coding 102139884,102221557,102222830 102140172,102221658,102223538 Gene ID= ENSG00000140153.17 TPM= 2.72 Transcript Type= NA chr14 102139893 102210530 102139893 102210530 + ENST00000342702.7@WDR20 ENST00000342702.7 protein_coding 102139893,102194938,102208603 102140172,102195120,102210530 Gene ID= ENSG00000140153.17 TPM= 33.51 Transcript Type= protein_coding chr14 102139893 102223671 102139893 102223671 + ENST00000556807.1@WDR20 ENST00000556807.1 protein_coding 102139893,102208603,102222830 102140172,102209862,102223671 Gene ID= ENSG00000140153.17 TPM= 2.72 Transcript Type= protein_coding chr14 102139911 102210525 102139911 102210525 + ENST00000299135.6@WDR20 ENST00000299135.6 protein_coding 102139911,102193463,102208603 102140172,102193475,102210525 Gene ID= ENSG00000140153.17 TPM= 6.34 Transcript Type= protein_coding chr14 102139844 102223673 102139844 102223673 + ENST00000335263.9@WDR20 ENST00000335263.9 protein_coding 102139844,102194938,102208603,102222830 102140172,102195120,102209862,102223673 Gene ID= ENSG00000140153.17 TPM= 10.87 Transcript Type= protein_coding chr14 102228841 102305200 102228841 102305200 - ENST00000361847.6@MOK ENST00000361847.6 protein_coding 102304962,102283478,102265823,102263546,102251917,102251756,102250812,102233688,102232535,102231707,102229457,102228841 102305200,102283592,102265912,102263616,102251995,102251804,102250990,102233789,102232708,102231821,102229657,102229366 Gene ID= ENSG00000080823.22 TPM= 1.2 Transcript Type= protein_coding chr14 102228829 102305193 102228829 102305193 - transcript2691.chr14.nic@MOK transcript2691.chr14.nic protein_coding 102304962,102283478,102263546,102251917,102251756,102250812,102233688,102232535,102231707,102228829 102305193,102283592,102263616,102251995,102251804,102250987,102233789,102232708,102231821,102229657 Gene ID= ENSG00000080823.22 TPM= 2.11 Transcript Type= NA chr14 102319734 102344649 102319734 102344649 + transcript2708.chr14.nic@ZNF839 transcript2708.chr14.nic protein_coding 102319734,102325985,102331622,102334554,102335689,102338816,102339094,102342103 102320053,102326887,102331846,102334646,102335838,102338953,102339223,102344649 Gene ID= ENSG00000022976.15 TPM= 4.53 Transcript Type= NA chr14 102319751 102342367 102319751 102342367 + ENST00000442396.6@ZNF839 ENST00000442396.6 protein_coding 102319751,102325985,102331622,102334554,102335689,102338816,102339094,102341323 102320053,102326887,102331846,102334646,102335838,102338953,102339223,102342367 Gene ID= ENSG00000022976.15 TPM= 14.79 Transcript Type= protein_coding chr14 102341102 102362916 102341102 102362916 - ENST00000559514.5@CINP ENST00000559514.5 protein_coding 102362845,102359419,102355768,102349919,102348279,102341102 102362916,102359587,102355897,102350048,102348759,102344389 Gene ID= ENSG00000100865.14 TPM= 21.13 Transcript Type= nonsense_mediated_decay chr14 102342085 102362899 102342085 102362899 - transcript2716.chr14.nic@CINP transcript2716.chr14.nic protein_coding 102362845,102359419,102355768,102348279,102342085 102362899,102359587,102355897,102348759,102344389 Gene ID= ENSG00000100865.14 TPM= 3.92 Transcript Type= NA chr14 102348282 102362892 102348282 102362892 - ENST00000216756.10@CINP ENST00000216756.10 protein_coding 102362845,102359419,102355768,102349919,102348282 102362892,102359587,102355897,102350048,102348759 Gene ID= ENSG00000100865.14 TPM= 29.88 Transcript Type= protein_coding chr14 102506876 102509799 102506876 102509799 - ENST00000560748.5@ANKRD9 ENST00000560748.5 protein_coding 102509529,102508475,102506876 102509799,102508549,102507942 Gene ID= ENSG00000156381.8 TPM= 44.37 Transcript Type= protein_coding chr14 102592661 102730576 102592661 102730576 + ENST00000262241.6@RCOR1 ENST00000262241.6 protein_coding 102592661,102593266,102681895,102701278,102707351,102708465,102710935,102714423,102721007,102721320,102722187,102726468 102593187,102593325,102681978,102701330,102707512,102708583,102711013,102714617,102721084,102721377,102722416,102730576 Gene ID= ENSG00000089902.9 TPM= 5.43 Transcript Type= protein_coding chr14 102932379 103057462 102932379 103057462 - ENST00000361246.6@CDC42BPB ENST00000361246.6 protein_coding 103056999,103012097,103008472,103003928,102999565,102986487,102983556,102980773,102978126,102975883,102975684,102974016,102971919,102970151,102968472,102968253,102967046,102966282,102964502,102963061,102959631,102954602,102954198,102952498,102950466,102949765,102947721,102946468,102945662,102943891,102940227,102940046,102939830,102939610,102938306,102938104,102932379 103057462,103012188,103008555,103004023,102999713,102986580,102983756,102981021,102978205,102976049,102975803,102974149,102972161,102970261,102968716,102968358,102967170,102966387,102964650,102963155,102959710,102954688,102954275,102952603,102950602,102949904,102947802,102946684,102945724,102944487,102940324,102940130,102939947,102939727,102938411,102938174,102933843 Gene ID= ENSG00000198752.10 TPM= 6.34 Transcript Type= protein_coding chr14 103121467 103137440 103121467 103137440 + transcript2744.chr14.nnic@TNFAIP2 transcript2744.chr14.nnic protein_coding 103121467,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219,103135809 103121499,103123483,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103135351,103137440 Gene ID= ENSG00000185215.8 TPM= 16.59 Transcript Type= NA chr14 103121432 103137439 103121432 103137439 + transcript2745.chr14.nnic@TNFAIP2 transcript2745.chr14.nnic protein_coding 103121432,103123437,103124375,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219 103121499,103123951,103124506,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439 Gene ID= ENSG00000185215.8 TPM= 11.88 Transcript Type= NA chr14 103121442 103137440 103121442 103137440 + transcript2747.chr14.nnic@TNFAIP2 transcript2747.chr14.nnic protein_coding 103121442,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219,103135809 103121499,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103135351,103137440 Gene ID= ENSG00000185215.8 TPM= 15.23 Transcript Type= NA chr14 103121230 103137439 103121230 103137439 + transcript2750.chr14.nnic@TNFAIP2 transcript2750.chr14.nnic protein_coding 103121230,103123437,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219 103121499,103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439 Gene ID= ENSG00000185215.8 TPM= 21.84 Transcript Type= NA chr14 103123461 103137439 103123461 103137439 + ENST00000560869.5@TNFAIP2 ENST00000560869.5 protein_coding 103123461,103126310,103127005,103129740,103130002,103130315,103131052,103131639,103132750,103133362,103133682,103135219 103123951,103126692,103127629,103129854,103130124,103130415,103131150,103131762,103132872,103133517,103133803,103137439 Gene ID= ENSG00000185215.8 TPM= 25.46 Transcript Type= protein_coding chr14 103334088 103343225 103334088 103343225 + transcript2758.chr14.nic@EIF5 transcript2758.chr14.nic protein_coding 103334088,103334389,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963,103342159 103334260,103334597,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103341125,103343225 Gene ID= ENSG00000100664.10 TPM= 22.64 Transcript Type= NA chr14 103334002 103345025 103334002 103345025 + ENST00000216554.7@EIF5 ENST00000216554.7 protein_coding 103334002,103334389,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963 103334260,103334597,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103345025 Gene ID= ENSG00000100664.10 TPM= 324.77 Transcript Type= protein_coding chr14 103334195 103345022 103334195 103345022 + transcript2770.chr14.nic@EIF5 transcript2770.chr14.nic protein_coding 103334195,103335653,103336036,103336677,103337116,103338327,103338735,103339172,103339639,103340427,103340963 103334260,103335932,103336117,103336849,103337227,103338472,103338893,103339333,103339803,103340561,103345022 Gene ID= ENSG00000100664.10 TPM= 12.36 Transcript Type= NA chr14 103385373 103503827 103385373 103503827 + transcript2780.chr14.nic@MARK3 transcript2780.chr14.nic protein_coding 103385373,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468081,103474993,103480387,103491777,103498502,103500156,103502882 103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103500200,103503827 Gene ID= ENSG00000075413.17 TPM= 17.21 Transcript Type= NA chr14 103385373 103503827 103385373 103503827 + transcript2782.chr14.nic@MARK3 transcript2782.chr14.nic protein_coding 103385373,103405076,103428387,103448919,103451918,103457142,103462405,103465557,103465972,103466343,103467079,103468033,103474993,103480387,103491777,103498502,103502882 103386080,103405267,103428440,103448967,103451983,103457212,103462461,103465793,103466091,103466442,103467191,103468186,103475210,103480490,103492034,103498528,103503827 Gene ID= ENSG00000075413.17 TPM= 17.21 Transcript Type= NA chr14 103519659 103523111 103519659 103523111 - ENST00000348956.6@CKB ENST00000348956.6 protein_coding 103522766,103522301,103522023,103521818,103521263,103520469,103520122,103519659 103523111,103522505,103522177,103521950,103521434,103520592,103520311,103520042 Gene ID= ENSG00000166165.12 TPM= 255.54 Transcript Type= protein_coding chr14 103519659 103522833 103519659 103522833 - transcript2812.chr14.nic@CKB transcript2812.chr14.nic protein_coding 103522766,103522301,103522023,103521263,103520469,103520122,103519659 103522833,103522505,103522177,103521950,103520592,103520311,103520042 Gene ID= ENSG00000166165.12 TPM= 21.91 Transcript Type= NA chr14 103519679 103521443 103519679 103521443 - ENST00000554282.5@CKB ENST00000554282.5 protein_coding 103521263,103520122,103519679 103521443,103520311,103520042 Gene ID= ENSG00000166165.12 TPM= 10.87 Transcript Type= retained_intron chr14 103519695 103521770 103519695 103521770 - ENST00000553528.5@CKB ENST00000553528.5 protein_coding 103521263,103520469,103520122,103519695 103521770,103520592,103520311,103520042 Gene ID= ENSG00000166165.12 TPM= 19.02 Transcript Type= retained_intron chr14 103529196 103537072 103529196 103537072 + transcript2823.chr14.nnic@TRMT61A transcript2823.chr14.nnic protein_coding 103529196,103530150,103532582,103534550 103529261,103530309,103532848,103537072 Gene ID= ENSG00000166166.12 TPM= 6.34 Transcript Type= NA chr14 103529184 103537073 103529184 103537073 + ENST00000389749.8@TRMT61A ENST00000389749.8 protein_coding 103529184,103529950,103532582,103534550 103529261,103530309,103532848,103537073 Gene ID= ENSG00000166166.12 TPM= 50.71 Transcript Type= protein_coding chr14 103562965 103590504 103562965 103590504 + ENST00000440963.1@APOPT1 ENST00000440963.1 protein_coding 103562965,103587274,103590181 103563124,103587364,103590504 Gene ID= ENSG00000256053.7 TPM= 3.62 Transcript Type= protein_coding chr14 103629165 103686228 103629165 103686228 + transcript2850.chr14.nic@KLC1 transcript2850.chr14.nic protein_coding 103629165,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103684986,103685638 103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103685036,103686228 Gene ID= ENSG00000126214.21 TPM= 6.34 Transcript Type= NA chr14 103629241 103701544 103629241 103701544 + ENST00000554280.5@KLC1 ENST00000554280.5 protein_coding 103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201 103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679518,103687211,103700727,103701544 Gene ID= ENSG00000126214.21 TPM= 7.79 Transcript Type= protein_coding chr14 103629237 103701544 103629237 103701544 + ENST00000334553.10@KLC1 ENST00000334553.10 protein_coding 103629237,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103692359,103700655,103701201 103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103692425,103700727,103701544 Gene ID= ENSG00000126214.21 TPM= 2.35 Transcript Type= protein_coding chr14 103629241 103701544 103629241 103701544 + ENST00000452929.6@KLC1 ENST00000452929.6 protein_coding 103629241,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103687081,103700655,103701201 103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103687211,103700727,103701544 Gene ID= ENSG00000126214.21 TPM= 7.79 Transcript Type= protein_coding chr14 103629237 103686211 103629237 103686211 + ENST00000553286.5@KLC1 ENST00000553286.5 protein_coding 103629237,103654564,103657546,103662116,103662702,103669511,103670182,103673014,103673332,103675552,103675689,103677415,103679384,103684986 103629494,103654825,103657776,103662194,103662927,103669598,103670283,103673187,103673431,103675601,103675756,103677523,103679545,103686211 Gene ID= ENSG00000126214.21 TPM= 1.81 Transcript Type= protein_coding chr14 103697617 103715504 103697617 103715504 - ENST00000352127.11@XRCC3 ENST00000352127.11 protein_coding 103715424,103711466,103711033,103708522,103707003,103703173,103699364,103699133,103697617 103715504,103711567,103711245,103708659,103707215,103703327,103699576,103699179,103699017 Gene ID= ENSG00000126215.13 TPM= 3.62 Transcript Type= protein_coding chr14 103715730 103733668 103715730 103733668 + ENST00000216602.10@ZFYVE21 ENST00000216602.10 protein_coding 103715730,103726792,103727746,103728908,103729091,103729793,103732620,103732983 103715979,103726842,103727914,103728983,103729182,103729846,103732762,103733668 Gene ID= ENSG00000100711.13 TPM= 5.43 Transcript Type= protein_coding chr14 103715808 103733662 103715808 103733662 + ENST00000311141.6@ZFYVE21 ENST00000311141.6 protein_coding 103715808,103726792,103727746,103728908,103729091,103732620,103732983 103715979,103726842,103727914,103728983,103729182,103732762,103733662 Gene ID= ENSG00000100711.13 TPM= 67.92 Transcript Type= protein_coding chr14 103912288 103921557 103912288 103921557 - ENST00000286953.7@C14orf2 ENST00000286953.7 protein_coding 103921470,103915066,103913961,103912288 103921557,103915189,103913984,103912694 Gene ID= ENSG00000156411.9 TPM= 231.67 Transcript Type= protein_coding chr14 103912302 103921501 103912302 103921501 - ENST00000414262.6@C14orf2 ENST00000414262.6 protein_coding 103921470,103920940,103915066,103913961,103912302 103921501,103921208,103915189,103913984,103912694 Gene ID= ENSG00000156411.9 TPM= 4.37 Transcript Type= protein_coding chr14 103912517 103921538 103912517 103921538 - ENST00000553449.1@C14orf2 ENST00000553449.1 protein_coding 103921470,103913961,103912517 103921538,103913984,103912694 Gene ID= ENSG00000156411.9 TPM= 18.41 Transcript Type= processed_transcript chr14 104139040 104180894 104139040 104180894 + ENST00000315264.7@KIF26A ENST00000315264.7 protein_coding 104139040,104152015,104157755,104166859,104171723,104172575,104172977,104173330,104173706,104174148,104174982,104178550,104179236,104179609 104139288,104152461,104157942,104167048,104171935,104172668,104173239,104173513,104173868,104174310,104177898,104178755,104179386,104180894 Gene ID= ENSG00000066735.14 TPM= 7.24 Transcript Type= protein_coding chr14 104579474 104589861 104579474 104589861 + transcript2888.chr14.nnic@C14orf180 transcript2888.chr14.nnic protein_coding 104579474,104579952,104586415,104587749,104588274 104579687,104580003,104586541,104587878,104589861 Gene ID= ENSG00000184601.10 TPM= 2.04 Transcript Type= NA chr14 104579684 104590515 104579684 104590515 + ENST00000557649.5@C14orf180 ENST00000557649.5 protein_coding 104579684,104586415,104587749,104588274,104588578 104580003,104586541,104587878,104588309,104590515 Gene ID= ENSG00000184601.10 TPM= 2.04 Transcript Type= protein_coding chr14 104579764 104589861 104579764 104589861 + transcript2891.chr14.nic@C14orf180 transcript2891.chr14.nic protein_coding 104579764,104586415,104587749,104588274 104580003,104586541,104587878,104589861 Gene ID= ENSG00000184601.10 TPM= 2.94 Transcript Type= NA chr14 104581263 104589861 104581263 104589861 + transcript2892.chr14.nic@C14orf180 transcript2892.chr14.nic protein_coding 104581263,104586415,104587749,104588274 104581625,104586541,104587878,104589861 Gene ID= ENSG00000184601.10 TPM= 2.04 Transcript Type= NA chr14 104689621 104704809 104689621 104704809 + ENST00000398337.8@INF2 ENST00000398337.8 protein_coding 104689621,104701357,104703105,104703295,104703916 104689739,104701756,104703220,104703454,104704809 Gene ID= ENSG00000203485.12 TPM= 19.92 Transcript Type= protein_coding chr14 104689637 104719603 104689637 104719603 + ENST00000392634.8@INF2 ENST00000392634.8 protein_coding 104689637,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104715284,104718795 104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104715340,104719603 Gene ID= ENSG00000203485.12 TPM= 8.15 Transcript Type= protein_coding chr14 104689606 104722535 104689606 104722535 + ENST00000330634.11@INF2 ENST00000330634.11 protein_coding 104689606,104701357,104703105,104703295,104703916,104706035,104706910,104707253,104708436,104708671,104709281,104709620,104710088,104710937,104711079,104711629,104712433,104712828,104713207,104713445,104714203,104718795 104689739,104701756,104703220,104703454,104703949,104706176,104707051,104708002,104708587,104708732,104709383,104709705,104710188,104711007,104711186,104711699,104712553,104712992,104713309,104713606,104714856,104722535 Gene ID= ENSG00000203485.12 TPM= 5.43 Transcript Type= protein_coding chr14 104724175 104747310 104724175 104747310 + transcript2899.chr14.nnic@ADSSL1 transcript2899.chr14.nnic protein_coding 104724175,104735020,104738376,104739328,104739655,104739767,104740601,104740839,104741117,104741848,104743067,104744812,104746236,104746951 104724462,104735122,104738438,104739378,104739674,104739816,104740708,104740920,104741243,104742002,104743191,104744909,104746385,104747310 Gene ID= ENSG00000185100.10 TPM= 2.72 Transcript Type= NA chr14 104724186 104747310 104724186 104747310 + ENST00000330877.6@ADSSL1 ENST00000330877.6 protein_coding 104724186,104735020,104738376,104739328,104739750,104740601,104740839,104741117,104741848,104743067,104744812,104746236,104746951 104724462,104735122,104738438,104739378,104739816,104740708,104740920,104741243,104742002,104743191,104744909,104746385,104747310 Gene ID= ENSG00000185100.10 TPM= 23.54 Transcript Type= protein_coding chr14 104753119 104759653 104753119 104759653 + transcript2902.chr14.nnic@SIVA1 transcript2902.chr14.nnic protein_coding 104753119,104755630,104756604,104759219 104753319,104755824,104756760,104759653 Gene ID= ENSG00000184990.12 TPM= 2.72 Transcript Type= NA chr14 104753100 104759657 104753100 104759657 + ENST00000329967.10@SIVA1 ENST00000329967.10 protein_coding 104753100,104755630,104756604,104759428 104753319,104755824,104756760,104759657 Gene ID= ENSG00000184990.12 TPM= 91.46 Transcript Type= protein_coding chr14 104753159 104759659 104753159 104759659 + ENST00000347067.9@SIVA1 ENST00000347067.9 protein_coding 104753159,104756604,104759428 104753319,104756760,104759659 Gene ID= ENSG00000184990.12 TPM= 3.62 Transcript Type= protein_coding chr14 104769347 104795799 104769347 104795799 - transcript2923.chr14.nic@AKT1 transcript2923.chr14.nic protein_coding 104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769347 104795799,104793304,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420 Gene ID= ENSG00000142208.15 TPM= 67.53 Transcript Type= NA chr14 104769347 104795770 104769347 104795770 - transcript2924.chr14.nnic@AKT1 transcript2924.chr14.nnic protein_coding 104795484,104794119,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769347 104795770,104794261,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420 Gene ID= ENSG00000142208.15 TPM= 64.66 Transcript Type= NA chr14 104769349 104795679 104769349 104795679 - ENST00000407796.6@AKT1 ENST00000407796.6 protein_coding 104795484,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349 104795679,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420 Gene ID= ENSG00000142208.15 TPM= 72.14 Transcript Type= protein_coding chr14 104769349 104795751 104769349 104795751 - ENST00000349310.7@AKT1 ENST00000349310.7 protein_coding 104795484,104793127,104792598,104780088,104776659,104775652,104775076,104774938,104773912,104773455,104773251,104772878,104772365,104770745,104769349 104795751,104793210,104792722,104780216,104776770,104775799,104775207,104775003,104773980,104773580,104773379,104773092,104772452,104770847,104770420 Gene ID= ENSG00000142208.15 TPM= 24.97 Transcript Type= protein_coding chr14 104865301 104896749 104865301 104896749 + transcript2970.chr14.nic@CEP170B transcript2970.chr14.nic protein_coding 104865301,104868424,104876256,104877885,104878443,104880287,104882728,104883035,104883831,104885369,104886040,104886275,104889515,104892976,104893523,104893761,104894285,104894537,104894711 104865513,104868555,104876345,104877963,104878501,104880425,104882832,104883508,104884549,104885542,104886130,104887978,104889758,104893135,104893666,104893849,104894378,104894588,104896749 Gene ID= ENSG00000099814.15 TPM= 10.87 Transcript Type= NA chr14 104865313 104896770 104865313 104896770 + ENST00000453495.2@CEP170B ENST00000453495.2 protein_coding 104865313,104868424,104876256,104877885,104878445,104880287,104882728,104883032,104883831,104885369,104886040,104886275,104889515,104892976,104893523,104893761,104894285,104894537,104894711 104865513,104868555,104876345,104877965,104878501,104880425,104882832,104883508,104884549,104885542,104886130,104887978,104889758,104893135,104893666,104893849,104894378,104894588,104896770 Gene ID= ENSG00000099814.15 TPM= 11.77 Transcript Type= protein_coding chr14 104985771 104995514 104985771 104995514 + transcript2976.chr14.nic@C14orf79 transcript2976.chr14.nic protein_coding 104985771,104988943,104991491,104992948,104994598 104985878,104989707,104991620,104993064,104995514 Gene ID= ENSG00000140104.13 TPM= 1.81 Transcript Type= NA chr14 104985793 104995512 104985793 104995512 + ENST00000547315.5@C14orf79 ENST00000547315.5 protein_coding 104985793,104988943,104991491,104992948,104994598 104986854,104989088,104991620,104993064,104995512 Gene ID= ENSG00000140104.13 TPM= 6.34 Transcript Type= protein_coding chr14 105009573 105021148 105009573 105021148 - ENST00000336219.3@CDCA4 ENST00000336219.3 protein_coding 105020999,105009573 105021148,105011935 Gene ID= ENSG00000170779.10 TPM= 7.24 Transcript Type= protein_coding chr14 105049397 105065445 105049397 105065445 - ENST00000392585.2@GPR132 ENST00000392585.2 protein_coding 105065379,105057167,105049397 105065445,105057280,105052102 Gene ID= ENSG00000183484.11 TPM= 2.72 Transcript Type= protein_coding chr14 105172938 105181312 105172938 105181312 - transcript2991.chr14.nnic@NUDT14 transcript2991.chr14.nnic protein_coding 105181129,105177692,105176963,105176534,105172938 105181312,105177735,105176994,105176771,105173261 Gene ID= ENSG00000183828.14 TPM= 2.26 Transcript Type= NA chr14 105172939 105181303 105172939 105181303 - ENST00000392568.6@NUDT14 ENST00000392568.6 protein_coding 105181129,105177692,105176963,105176534,105172939 105181303,105177735,105177027,105176771,105173261 Gene ID= ENSG00000183828.14 TPM= 28.52 Transcript Type= protein_coding chr14 105209289 105248933 105209289 105248933 - transcript3026.chr14.nnic@BRF1 transcript3026.chr14.nnic protein_coding 105248762,105241265,105228820,105226634,105226251,105226069,105221648,105220069,105219151,105218998,105217544,105212113,105211122,105209289 105248933,105241414,105228913,105226760,105226290,105226161,105221914,105220130,105219232,105219053,105217800,105212164,105211293,105210588 Gene ID= ENSG00000185024.16 TPM= 4.53 Transcript Type= NA chr14 105209286 105300688 105209286 105300688 - ENST00000547530.6@BRF1 ENST00000547530.6 protein_coding 105300446,105286296,105272721,105256518,105252507,105241265,105228820,105226634,105226251,105226069,105221648,105220069,105219151,105218998,105217544,105212113,105211122,105209286 105300688,105286376,105272894,105256549,105252579,105241414,105228913,105226760,105226290,105226161,105221914,105220130,105219232,105219053,105217800,105212164,105211293,105210588 Gene ID= ENSG00000185024.16 TPM= 9.96 Transcript Type= protein_coding chr14 105248574 105251093 105248574 105251093 + ENST00000392554.7@BTBD6 ENST00000392554.7 protein_coding 105248574,105249157,105249360,105249640 105249085,105249247,105249478,105251093 Gene ID= ENSG00000184887.13 TPM= 48.45 Transcript Type= protein_coding chr14 105248626 105251093 105248626 105251093 + ENST00000463376.6@BTBD6 ENST00000463376.6 protein_coding 105248626,105249360,105249640 105249247,105249478,105251093 Gene ID= ENSG00000184887.13 TPM= 12.22 Transcript Type= protein_coding chr14 105300777 105398147 105300777 105398147 + transcript3000.chr14.nic@PACS2 transcript3000.chr14.nic protein_coding 105300777,105348493,105352378,105355052,105367213,105368074,105368459,105369841,105376768,105379739,105380080,105380957,105381914,105382477,105382807,105383359,105384353,105384879,105389961,105391207,105391631,105392619,105393222,105394554 105300979,105348580,105352467,105355177,105367375,105368147,105368539,105369900,105376925,105379829,105380154,105381099,105382046,105382581,105382913,105383513,105384463,105384987,105390003,105391249,105391766,105392845,105393335,105398147 Gene ID= ENSG00000179364.13 TPM= 15.47 Transcript Type= NA chr14 105419820 105470727 105419820 105470727 + ENST00000435036.6@MTA1 ENST00000435036.6 protein_coding 105419820,105438672,105445418,105449359,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105468338,105469467,105469841,105470065 105420063,105438739,105445511,105449409,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105468349,105469498,105469992,105470727 Gene ID= ENSG00000182979.17 TPM= 1.81 Transcript Type= protein_coding chr14 105419833 105470683 105419833 105470683 + transcript3048.chr14.nnic@MTA1 transcript3048.chr14.nnic protein_coding 105419833,105438672,105445418,105449145,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105469467,105469841,105470065 105420063,105438739,105445511,105449409,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105469498,105469992,105470683 Gene ID= ENSG00000182979.17 TPM= 3.17 Transcript Type= NA chr14 105419822 105470729 105419822 105470729 + ENST00000331320.11@MTA1 ENST00000331320.11 protein_coding 105419822,105438672,105445418,105449359,105450058,105450261,105454193,105458270,105460358,105460765,105463184,105463493,105464032,105464416,105464674,105465094,105466426,105466707,105469467,105469841,105470065 105420063,105438739,105445511,105449409,105450184,105450324,105454310,105458372,105460457,105460953,105463258,105463551,105464147,105464567,105464863,105465183,105466578,105466742,105469498,105469992,105470729 Gene ID= ENSG00000182979.17 TPM= 23.09 Transcript Type= protein_coding chr14 105474150 105480170 105474150 105480170 + ENST00000329146.8@CRIP2 ENST00000329146.8 protein_coding 105474150,105478266,105478450,105478731,105478979,105479125,105479436,105479586 105474905,105478360,105478507,105478871,105479047,105479219,105479493,105480170 Gene ID= ENSG00000182809.10 TPM= 63.84 Transcript Type= protein_coding chr14 105474832 105480152 105474832 105480152 + ENST00000547643.5@CRIP2 ENST00000547643.5 protein_coding 105474832,105478266,105478450,105478731,105478979,105479125,105479586 105474905,105478360,105478507,105478871,105479047,105479493,105480152 Gene ID= ENSG00000182809.10 TPM= 2.26 Transcript Type= retained_intron chr14 105486317 105488791 105486317 105488791 + ENST00000330233.11@CRIP1 ENST00000330233.11 protein_coding 105486317,105488166,105488331,105488471,105488663 105487299,105488260,105488388,105488516,105488791 Gene ID= ENSG00000213145.9 TPM= 9.06 Transcript Type= protein_coding chr14 105526603 105530202 105526603 105530202 + ENST00000392519.6@TMEM121 ENST00000392519.6 protein_coding 105526603,105528722 105526653,105530202 Gene ID= ENSG00000184986.10 TPM= 9.06 Transcript Type= protein_coding chr14 105586889 105588395 105586889 105588395 - ENST00000390539.2@IGHA2 ENST00000390539.2 IG_C_gene 105588089,105587554,105586889 105588395,105587874,105587331 Gene ID= ENSG00000211890.4 TPM= 3.62 Transcript Type= IG_C_gene chr14 105624336 106012460 105624336 106012460 - transcript3139.chr14.nnic@IGHG1 transcript3139.chr14.nnic IG_C_gene 106012311,106012184,105939995,105742777,105742341,105741893,105741466,105624336 106012460,106012228,105940024,105743016,105742385,105742222,105741795,105624468 Gene ID= ENSG00000211896.7 TPM= 46.33 Transcript Type= NA chr14 105624336 106360325 105624336 106360325 - transcript3163.chr14.nnic@IGHG1 transcript3163.chr14.nnic IG_C_gene 106360199,106359777,105864215,105742777,105742341,105741893,105741466,105624336 106360325,106360097,105864263,105743070,105742385,105742222,105741795,105624468 Gene ID= ENSG00000211896.7 TPM= 208.58 Transcript Type= NA chr14 105668111 106154164 105668111 106154164 - transcript3338.chr14.nnic@IGHG1 transcript3338.chr14.nnic IG_C_gene 106154046,106055953,105742777,105742341,105741893,105668111 106154164,106055960,105743016,105742385,105742222,105668565 Gene ID= ENSG00000211896.7 TPM= 26.85 Transcript Type= NA chr14 105741338 105743071 105741338 105743071 - ENST00000390549.6@IGHG1 ENST00000390549.6 IG_C_gene 105742777,105742341,105741893,105741338 105743071,105742385,105742222,105741795 Gene ID= ENSG00000211896.7 TPM= 13.58 Transcript Type= IG_C_gene chr14 105643068 105644790 105643068 105644790 - ENST00000390545.3@IGHG2 ENST00000390545.3 IG_C_gene 105644496,105644068,105643623,105643068 105644790,105644103,105643949,105643525 Gene ID= ENSG00000211893.4 TPM= 89.65 Transcript Type= IG_C_gene chr14 105707118 105708665 105707118 105708665 - ENST00000390547.3@IGHA1 ENST00000390547.3 IG_C_gene 105708359,105707785,105707118 105708665,105708144,105707562 Gene ID= ENSG00000211895.5 TPM= 81.5 Transcript Type= IG_C_gene chr14 105769102 105771405 105769102 105771405 - ENST00000390551.6@IGHG3 ENST00000390551.6 IG_C_gene 105771112,105770669,105770481,105770293,105770105,105769657,105769102 105771405,105770719,105770525,105770337,105770149,105769986,105769559 Gene ID= ENSG00000211897.9 TPM= 18.26 Transcript Type= IG_C_gene chr14 105854220 105856218 105854220 105856218 - ENST00000390559.6@IGHM ENST00000390559.6 IG_C_gene 105855906,105855480,105854917,105854220 105856218,105855815,105855234,105854737 Gene ID= ENSG00000211899.9 TPM= 4.53 Transcript Type= IG_C_gene chr15 20383124 20506212 20383124 20506212 - transcript1.chr15.nnic@HERC2P3 transcript1.chr15.nnic transcribed_unprocessed_pseudogene 20506108,20505391,20483403,20477202,20466195,20462831,20462343,20461192,20458233,20457827,20457593,20457305,20454540,20453840,20453620,20453351,20452368,20445859,20444227,20443371,20440474,20439198,20438927,20438592,20437294,20435849,20431093,20383124 20506212,20505493,20483517,20477361,20466370,20463001,20462446,20461342,20458447,20457959,20457720,20457500,20454673,20454010,20453762,20453502,20452559,20446046,20444419,20443521,20440642,20439655,20439123,20438822,20437432,20435992,20431235,20383456 Gene ID= ENSG00000180229.12 TPM= 2.72 Transcript Type= NA chr15 20383115 20506161 20383115 20506161 - ENST00000428453.5@HERC2P3 ENST00000428453.5 transcribed_unprocessed_pseudogene 20506108,20505391,20483403,20466195,20462831,20462343,20461192,20458233,20457827,20457593,20457305,20454540,20453840,20453620,20453351,20452368,20445859,20444227,20443371,20440474,20439508,20438927,20438592,20437294,20435849,20431093,20383115 20506161,20505493,20483517,20466370,20463001,20462446,20461342,20458447,20457959,20457720,20457500,20454673,20454010,20453762,20453502,20452559,20446046,20444419,20443521,20440642,20439655,20439123,20438822,20437432,20435992,20431235,20383456 Gene ID= ENSG00000180229.12 TPM= 2.72 Transcript Type= processed_transcript chr15 20642807 20756144 20642807 20756144 - transcript13.chr15.nnic@NBEAP1 transcript13.chr15.nnic transcribed_unprocessed_pseudogene 20755930,20671113,20669468,20642807 20756144,20671268,20669637,20646463 Gene ID= ENSG00000258590.5 TPM= 1.81 Transcript Type= NA chr15 22479155 22494644 22479155 22494644 - transcript14.chr15.nnic@AC100757.4 transcript14.chr15.nnic unprocessed_pseudogene 22494298,22484607,22482195,22481978,22479155 22494644,22484807,22482421,22482102,22480942 Gene ID= ENSG00000281909.1 TPM= 2.72 Transcript Type= NA chr15 22494896 22590828 22494896 22590828 + transcript19.chr15.nnic@HERC2P2 transcript19.chr15.nnic transcribed_unprocessed_pseudogene 22494896,22495570,22516876,22523042,22523347,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943 22494955,22495672,22516990,22523201,22523478,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590828 Gene ID= ENSG00000276550.4 TPM= 4.66 Transcript Type= NA chr15 22494834 22590828 22494834 22590828 + transcript28.chr15.nnic@HERC2P2 transcript28.chr15.nnic transcribed_unprocessed_pseudogene 22494834,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561258,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943 22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22560935,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590828 Gene ID= ENSG00000276550.4 TPM= 3.08 Transcript Type= NA chr15 22494834 22590828 22494834 22590828 + transcript35.chr15.nnic@HERC2P2 transcript35.chr15.nnic transcribed_unprocessed_pseudogene 22494834,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943 22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546734,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590828 Gene ID= ENSG00000276550.4 TPM= 3.76 Transcript Type= NA chr15 22494834 22590822 22494834 22590822 + transcript37.chr15.nnic@HERC2P2 transcript37.chr15.nnic transcribed_unprocessed_pseudogene 22494834,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589680 22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590822 Gene ID= ENSG00000276550.4 TPM= 4.53 Transcript Type= NA chr15 22494834 22590828 22494834 22590828 + transcript38.chr15.nnic@HERC2P2 transcript38.chr15.nnic transcribed_unprocessed_pseudogene 22494834,22495570,22516876,22534068,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943 22494955,22495672,22516990,22534243,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590828 Gene ID= ENSG00000276550.4 TPM= 7.38 Transcript Type= NA chr15 22494834 22590828 22494834 22590828 + transcript41.chr15.nnic@HERC2P2 transcript41.chr15.nnic transcribed_unprocessed_pseudogene 22494834,22495570,22516876,22537438,22537993,22539097,22541995,22542483,22542723,22542943,22545767,22546430,22546678,22546938,22547881,22554385,22556012,22556910,22559789,22560788,22561559,22562949,22564389,22566305,22569149,22572929,22573279,22573975,22577159,22577430,22579584,22587344,22589943 22494955,22495672,22516990,22537608,22538096,22539247,22542209,22542615,22542850,22543138,22545900,22546600,22546820,22547089,22548072,22554572,22556204,22557092,22559970,22561454,22561789,22563087,22564532,22566362,22569291,22573181,22573415,22574073,22577332,22577555,22579723,22587391,22590828 Gene ID= ENSG00000276550.4 TPM= 3.76 Transcript Type= NA chr15 22714207 22764526 22714207 22764526 + transcript59.chr15.nnic@PDCD6IPP1 transcript59.chr15.nnic transcribed_unprocessed_pseudogene 22714207,22717659,22727105,22730461,22732673,22733981,22741060,22742463,22744604,22758819,22764224 22715902,22717727,22727227,22730638,22732784,22734150,22741308,22742597,22744698,22758921,22764526 Gene ID= ENSG00000275325.4 TPM= 5.43 Transcript Type= NA chr15 22714207 22750959 22714207 22750959 + transcript60.chr15.nnic@PDCD6IPP1 transcript60.chr15.nnic transcribed_unprocessed_pseudogene 22714207,22717659,22727105,22730461,22732673,22733981,22741060,22742463,22744604,22750436 22715902,22717727,22727227,22730638,22732784,22734150,22741308,22742597,22744698,22750959 Gene ID= ENSG00000275325.4 TPM= 5.43 Transcript Type= NA chr15 22838640 22868387 22838640 22868387 + transcript76.chr15.nic@NIPA2 transcript76.chr15.nic protein_coding 22838640,22839655,22845146,22851639,22853212,22858540,22860629,22866213 22839174,22839790,22845267,22851870,22853268,22858630,22860789,22868387 Gene ID= ENSG00000140157.14 TPM= 6.34 Transcript Type= NA chr15 22838660 22868384 22838660 22868384 + ENST00000337451.7@NIPA2 ENST00000337451.7 protein_coding 22838660,22839655,22845146,22851639,22853212,22858540,22860629,22866213 22838921,22839790,22845267,22851870,22853268,22858630,22860789,22868384 Gene ID= ENSG00000140157.14 TPM= 12.68 Transcript Type= protein_coding chr15 22838641 22868384 22838641 22868384 + ENST00000398014.6@NIPA2 ENST00000398014.6 protein_coding 22838641,22839655,22851639,22853212,22858540,22860629,22866213 22838921,22839790,22851870,22853268,22858630,22860789,22868384 Gene ID= ENSG00000140157.14 TPM= 6.34 Transcript Type= protein_coding chr15 22838640 22867719 22838640 22867719 + transcript83.chr15.nic@NIPA2 transcript83.chr15.nic protein_coding 22838640,22839655,22851639,22853212,22858540,22860629,22866213 22839174,22839790,22851870,22853268,22858630,22860789,22867719 Gene ID= ENSG00000140157.14 TPM= 2.72 Transcript Type= NA chr15 22838648 22868387 22838648 22868387 + transcript84.chr15.nic@NIPA2 transcript84.chr15.nic protein_coding 22838648,22845146,22851639,22853212,22858540,22860629,22866213 22838921,22845267,22851870,22853268,22858630,22860789,22868387 Gene ID= ENSG00000140157.14 TPM= 5.43 Transcript Type= NA chr15 22838992 22868387 22838992 22868387 + transcript88.chr15.nnic@NIPA2 transcript88.chr15.nnic protein_coding 22838992,22845146,22851639,22853212,22858540,22860629,22866213 22839174,22845267,22851870,22853268,22858630,22860789,22868387 Gene ID= ENSG00000140157.14 TPM= 2.72 Transcript Type= NA chr15 22838675 22867719 22838675 22867719 + transcript91.chr15.nnic@NIPA2 transcript91.chr15.nnic protein_coding 22838675,22851639,22853212,22858540,22860629,22866213 22838947,22851870,22853268,22858630,22860789,22867719 Gene ID= ENSG00000140157.14 TPM= 2.72 Transcript Type= NA chr15 22838713 22868387 22838713 22868387 + transcript92.chr15.nic@NIPA2 transcript92.chr15.nic protein_coding 22838713,22851639,22853212,22858540,22860629,22866213 22839174,22851870,22853268,22858630,22860789,22868387 Gene ID= ENSG00000140157.14 TPM= 4.53 Transcript Type= NA chr15 22838687 22867716 22838687 22867716 + ENST00000398013.7@NIPA2 ENST00000398013.7 protein_coding 22838687,22851639,22853212,22858540,22860629,22866213 22838921,22851870,22853268,22858630,22860789,22867716 Gene ID= ENSG00000140157.14 TPM= 31.69 Transcript Type= protein_coding chr15 22867052 22980335 22867052 22980335 - ENST00000617928.4@CYFIP1 ENST00000617928.4 protein_coding 22980287,22947169,22947003,22944862,22944558,22943173,22939411,22939192,22937104,22933802,22932223,22927906,22925982,22918692,22917788,22916477,22914726,22912179,22910737,22910520,22909194,22903706,22892890,22882868,22881846,22879913,22875199,22874550,22873491,22872825,22867052 22980335,22947291,22947092,22944939,22944659,22943354,22939507,22939320,22937208,22933893,22932340,22928028,22926107,22918858,22917935,22916630,22914882,22912275,22910813,22910628,22909313,22903905,22892977,22883011,22881936,22880043,22875271,22874644,22873729,22872972,22870192 Gene ID= ENSG00000273749.4 TPM= 126.78 Transcript Type= protein_coding chr15 22999176 23039673 22999176 23039673 - ENST00000615383.4@TUBGCP5 ENST00000615383.4 protein_coding 23039398,23037099,23036897,23032728,23031950,23030885,23027192,23026116,23024737,23023947,23021959,23019219,23017773,23011133,23009945,23008699,23006268,23006052,23005432,23004102,23003065,23000569,22999176 23039673,23037152,23037005,23032824,23032029,23031020,23027306,23026205,23024830,23024193,23022161,23019334,23018041,23011331,23010133,23008881,23006352,23006172,23005610,23004227,23003153,23000669,22999866 Gene ID= ENSG00000275835.4 TPM= 23.54 Transcript Type= protein_coding chr15 24954927 24978723 24954927 24978723 + ENST00000390687.8@SNRPN ENST00000390687.8 protein_coding 24954927,24962114,24967932,24974311,24975358,24976305,24976877,24977778,24978193,24978407 24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978723 Gene ID= ENSG00000128739.21 TPM= 284.34 Transcript Type= protein_coding chr15 24955005 24978548 24955005 24978548 + ENST00000577565.1@SNRPN ENST00000577565.1 protein_coding 24955005,24962114,24967932,24974288,24975358,24976305,24976877,24977778,24978193,24978407 24955062,24962209,24968082,24974456,24975509,24976416,24977029,24977916,24978318,24978548 Gene ID= ENSG00000128739.21 TPM= 4.53 Transcript Type= protein_coding chr15 24955014 24968829 24955014 24968829 + ENST00000338327.4@SNURF ENST00000338327.4 protein_coding 24955014,24962114,24967932,24968795 24955062,24962209,24968082,24968829 Gene ID= ENSG00000273173.5 TPM= 5.43 Transcript Type= protein_coding chr15 25107471 25120423 25107471 25120423 + transcript112.chr15.nic@SNHG14 transcript112.chr15.nic processed_transcript 25107471,25107910,25108998,25109198,25109555,25111765,25115299,25117410,25118268,25119065 25107588,25108038,25109103,25109403,25109715,25111894,25115656,25117515,25118382,25120423 Gene ID= ENSG00000224078.13 TPM= 1.81 Transcript Type= NA chr15 25337253 25439005 25337253 25439005 - transcript115.chr15.nic@UBE3A transcript115.chr15.nic protein_coding 25438489,25411908,25409088,25408620,25407067,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25337253 25439005,25411971,25409207,25408684,25407262,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257 Gene ID= ENSG00000114062.18 TPM= 4.35 Transcript Type= NA chr15 25337253 25439031 25337253 25439031 - transcript118.chr15.nnic@UBE3A transcript118.chr15.nnic protein_coding 25438489,25411908,25409088,25407067,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25337253 25439031,25411971,25409207,25407232,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257 Gene ID= ENSG00000114062.18 TPM= 4.35 Transcript Type= NA chr15 25337235 25439036 25337235 25439036 - transcript129.chr15.nnic@UBE3A transcript129.chr15.nnic protein_coding 25438489,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25337235 25439036,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257 Gene ID= ENSG00000114062.18 TPM= 4.35 Transcript Type= NA chr15 25337253 25439056 25337253 25439056 - ENST00000232165.7@UBE3A ENST00000232165.7 protein_coding 25438489,25405461,25375465,25370566,25360383,25356691,25355892,25354528,25354353,25340085,25337253 25439056,25405502,25375763,25371812,25360527,25356896,25356056,25354683,25354426,25340228,25339257 Gene ID= ENSG00000114062.18 TPM= 55.06 Transcript Type= protein_coding chr15 25678715 25863322 25678715 25863322 - transcript136.chr15.nic@ATP10A transcript136.chr15.nic protein_coding 25862648,25781019,25736056,25727160,25725951,25723891,25721657,25718182,25716730,25713674,25708197,25707976,25701916,25694819,25691715,25687703,25683286,25680994,25680810,25680121,25678715 25863322,25781223,25736141,25727266,25726082,25724021,25721909,25718399,25716924,25714241,25708300,25708102,25702100,25695146,25691791,25687996,25683486,25681074,25680914,25680308,25679974 Gene ID= ENSG00000206190.11 TPM= 3.62 Transcript Type= NA chr15 25707392 25863430 25707392 25863430 - transcript138.chr15.nic@ATP10A transcript138.chr15.nic protein_coding 25862648,25781019,25736056,25727160,25725951,25723891,25721657,25718182,25716730,25713674,25708197,25707392 25863430,25781223,25736141,25727266,25726082,25724021,25721909,25718399,25716924,25714241,25708300,25708102 Gene ID= ENSG00000206190.11 TPM= 1.81 Transcript Type= NA chr15 26543546 26773074 26543546 26773074 - ENST00000311550.9@GABRB3 ENST00000311550.9 protein_coding 26772883,26772681,26772402,26621314,26583332,26580319,26567581,26560932,26543546 26773074,26772772,26772469,26621534,26583414,26580456,26567733,26561176,26548134 Gene ID= ENSG00000166206.14 TPM= 1.81 Transcript Type= protein_coding chr15 28111040 28322152 28111040 28322152 - ENST00000261609.11@HERC2 ENST00000261609.11 protein_coding 28322075,28321362,28299402,28292888,28280068,28274905,28274291,28272894,28272215,28270695,28269248,28268465,28265817,28265618,28262918,28260777,28257061,28256089,28255872,28254340,28248552,28246742,28245881,28238602,28238114,28236963,28234070,28233664,28233434,28233146,28230367,28229674,28229460,28229195,28228218,28222028,28220452,28218489,28215621,28214655,28214076,28213742,28212445,28211002,28206240,28202347,28202113,28201456,28198601,28198378,28196461,28196215,28191961,28191139,28190965,28186577,28182401,28179142,28178887,28177419,28176950,28176687,28176428,28175512,28174395,28169484,28168407,28167687,28163094,28152677,28146237,28144673,28144077,28143873,28142827,28142238,28141731,28141432,28135478,28132653,28132100,28130503,28130163,28125006,28124037,28121346,28117013,28116665,28115429,28114612,28113573,28113071,28111040 28322152,28321464,28299516,28293022,28280287,28275005,28274447,28273004,28272386,28270868,28269436,28268616,28265974,28265731,28263169,28260970,28257261,28256317,28255996,28254518,28248736,28246897,28246066,28238772,28238217,28237113,28234284,28233796,28233561,28233341,28230500,28229847,28229596,28229346,28228409,28222215,28220644,28218671,28215802,28214802,28214272,28213972,28212583,28211145,28206382,28202614,28202249,28201554,28198769,28198503,28196569,28196354,28192151,28191244,28191056,28186752,28182512,28179223,28179030,28177509,28177127,28176768,28176599,28175656,28174620,28169655,28168590,28167827,28163285,28152830,28146344,28144804,28144235,28143991,28142952,28142393,28141846,28141630,28135692,28132830,28132261,28130594,28130302,28125193,28124234,28121429,28117154,28116859,28115541,28114802,28113678,28113283,28112035 Gene ID= ENSG00000128731.15 TPM= 9.06 Transcript Type= protein_coding chr15 28671082 28683601 28671082 28683601 + transcript152.chr15.nic@HERC2P9 transcript152.chr15.nic transcribed_unprocessed_pseudogene 28671082,28671731,28673888,28681796 28671633,28671856,28674027,28683601 Gene ID= ENSG00000206149.10 TPM= 2.72 Transcript Type= NA chr15 28885989 29118311 28885989 29118311 + transcript163.chr15.nic@APBA2 transcript163.chr15.nic protein_coding 28885989,28921640,28995753,29053845,29074921,29076055,29093075,29098490,29101599,29105379,29106607,29108270,29113876,29117062 28886278,28921749,28995806,29054835,29075001,29076091,29093220,29098576,29101784,29105558,29106819,29108389,29114016,29118311 Gene ID= ENSG00000034053.14 TPM= 2.72 Transcript Type= NA chr15 29700160 29710990 29700160 29710990 - transcript166.chr15.nic@TJP1 transcript166.chr15.nic protein_coding 29710831,29708559,29705528,29704201,29700160 29710990,29709036,29705745,29704305,29701689 Gene ID= ENSG00000104067.16 TPM= 3.62 Transcript Type= NA chr15 30103823 30133088 30103823 30133088 + transcript167.chr15.nnic@ULK4P3 transcript167.chr15.nnic transcribed_unprocessed_pseudogene 30103823,30110302,30113908,30116892,30127685,30131128 30104008,30110426,30113971,30116938,30127763,30133088 Gene ID= ENSG00000178081.12 TPM= 1.81 Transcript Type= NA chr15 30471098 30490312 30471098 30490312 + transcript172.chr15.nnic@AC127502.1 transcript172.chr15.nnic transcribed_unprocessed_pseudogene 30471098,30473812,30474356,30477787,30479024,30480742,30483119,30484502,30489268 30471426,30473930,30474512,30477942,30479193,30480907,30483248,30484686,30490312 Gene ID= ENSG00000215302.8 TPM= 2.72 Transcript Type= NA chr15 30903864 30943109 30903864 30943109 + transcript180.chr15.nic@FAN1 transcript180.chr15.nic protein_coding 30903864,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566 30903887,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943109 Gene ID= ENSG00000198690.9 TPM= 2.42 Transcript Type= NA chr15 30903873 30943108 30903873 30943108 + ENST00000362065.8@FAN1 ENST00000362065.8 protein_coding 30903873,30904512,30908118,30910614,30913858,30918164,30920545,30922235,30925127,30925789,30928553,30929203,30930543,30937119,30941566 30904011,30905897,30908258,30910815,30914091,30918295,30920653,30922354,30925291,30925939,30928656,30929397,30930671,30937259,30943108 Gene ID= ENSG00000198690.9 TPM= 28.68 Transcript Type= protein_coding chr15 30903892 30911643 30903892 30911643 + ENST00000561607.5@FAN1 ENST00000561607.5 protein_coding 30903892,30904512,30908118,30910614 30904024,30905897,30908258,30911643 Gene ID= ENSG00000198690.9 TPM= 3.62 Transcript Type= protein_coding chr15 30938941 30991910 30938941 30991910 - transcript188.chr15.nic@MTMR10 transcript188.chr15.nic protein_coding 30991447,30990777,30976819,30974931,30974314,30960881,30959034,30958863,30954763,30953562,30951968,30948302,30947130,30942890,30938941 30991910,30990837,30976955,30975003,30974456,30961073,30959121,30958951,30954893,30953631,30952038,30948471,30947300,30943072,30942072 Gene ID= ENSG00000166912.16 TPM= 2.26 Transcript Type= NA chr15 30938941 30991604 30938941 30991604 - ENST00000435680.5@MTMR10 ENST00000435680.5 protein_coding 30991447,30990777,30976819,30974931,30974314,30967920,30960881,30959034,30958863,30954763,30953562,30951968,30948302,30947130,30942890,30938941 30991604,30990837,30976955,30975003,30974456,30968010,30961073,30959121,30958951,30954893,30953631,30952038,30948471,30947300,30943072,30942072 Gene ID= ENSG00000166912.16 TPM= 8.6 Transcript Type= protein_coding chr15 31481685 31870697 31481685 31870697 - transcript201.chr15.nnic@OTUD7A transcript201.chr15.nnic protein_coding 31870507,31689359,31656983,31655096,31570018,31558969,31530707,31527181,31526349,31503691,31501690,31487452,31487194,31481685 31870697,31689481,31657077,31655250,31570197,31559187,31530808,31527308,31526461,31503818,31501839,31487566,31487278,31484724 Gene ID= ENSG00000169918.9 TPM= 2.26 Transcript Type= NA chr15 31481685 31870697 31481685 31870697 - transcript202.chr15.nnic@OTUD7A transcript202.chr15.nnic protein_coding 31870507,31689359,31655096,31570018,31558969,31530707,31527181,31526349,31503691,31501690,31487452,31487194,31481685 31870697,31689481,31655250,31570197,31559187,31530808,31527308,31526461,31503818,31501839,31487566,31487278,31484724 Gene ID= ENSG00000169918.9 TPM= 2.26 Transcript Type= NA chr15 31481685 31527422 31481685 31527422 - transcript203.chr15.nnic@OTUD7A transcript203.chr15.nnic protein_coding 31527181,31526349,31503691,31501690,31487452,31487194,31481685 31527422,31526461,31503818,31501839,31487566,31487278,31484724 Gene ID= ENSG00000169918.9 TPM= 2.72 Transcript Type= NA chr15 32517393 32536302 32517393 32536302 - transcript208.chr15.nnic@AC135983.2 transcript208.chr15.nnic transcribed_processed_pseudogene 32535924,32535273,32533794,32533212,32529783,32528532,32526813,32524471,32523029,32522448,32517393 32536302,32535376,32533912,32533368,32529938,32528701,32526978,32524600,32523213,32522567,32518445 Gene ID= ENSG00000223509.8 TPM= 1.81 Transcript Type= NA chr15 32536703 32581506 32536703 32581506 + transcript217.chr15.nnic@LINC02256 transcript217.chr15.nnic lincRNA 32536703,32575571,32575917,32579708 32537006,32575668,32576000,32581506 Gene ID= ENSG00000261064.1 TPM= 12.68 Transcript Type= NA chr15 32536701 32581506 32536701 32581506 + transcript220.chr15.nnic@LINC02256 transcript220.chr15.nnic lincRNA 32536701,32575917,32579708 32537006,32576000,32581506 Gene ID= ENSG00000261064.1 TPM= 5.43 Transcript Type= NA chr15 32615490 32639949 32615490 32639949 + ENST00000361627.7@ARHGAP11A ENST00000361627.7 protein_coding 32615490,32620108,32623492,32624173,32625080,32625487,32628728,32629595,32632979,32633933,32635777,32636257 32616340,32620178,32623588,32624426,32625243,32625633,32628802,32629762,32633108,32634041,32635915,32639949 Gene ID= ENSG00000198826.10 TPM= 1.81 Transcript Type= protein_coding chr15 33866227 34039176 33866227 34039176 - ENST00000306730.7@AVEN ENST00000306730.7 protein_coding 34038780,34003032,33875925,33870935,33867495,33866227 34039176,34003209,33875995,33871030,33867855,33866728 Gene ID= ENSG00000169857.7 TPM= 33.51 Transcript Type= protein_coding chr15 34084017 34101948 34084017 34101948 - ENST00000256545.8@EMC7 ENST00000256545.8 protein_coding 34101604,34095895,34090317,34088053,34084017 34101948,34096014,34090455,34088133,34084486 Gene ID= ENSG00000134153.9 TPM= 167.53 Transcript Type= protein_coding chr15 34140675 34210119 34140675 34210119 - transcript241.chr15.nic@KATNBL1 transcript241.chr15.nic protein_coding 34209951,34163560,34154644,34152790,34148632,34147380,34145398,34140675 34210119,34163690,34154684,34153069,34148750,34147430,34147289,34142371 Gene ID= ENSG00000134152.10 TPM= 2.72 Transcript Type= NA chr15 34140674 34210079 34140674 34210079 - ENST00000256544.7@KATNBL1 ENST00000256544.7 protein_coding 34209951,34163560,34154644,34152790,34148632,34147380,34147200,34146761,34145398,34140674 34210079,34163690,34154684,34153069,34148750,34147430,34147289,34146850,34145491,34142371 Gene ID= ENSG00000134152.10 TPM= 18.11 Transcript Type= protein_coding chr15 34225013 34230147 34225013 34230147 + ENST00000249209.8@EMC4 ENST00000249209.8 protein_coding 34225013,34225536,34227693,34229753 34225200,34225650,34227846,34230147 Gene ID= ENSG00000128463.12 TPM= 9.96 Transcript Type= protein_coding chr15 34225037 34230156 34225037 34230156 + ENST00000558205.5@EMC4 ENST00000558205.5 protein_coding 34225037,34225536,34227693,34228429,34229753 34225200,34225658,34227846,34228589,34230156 Gene ID= ENSG00000128463.12 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr15 34341713 34343177 34341713 34343177 - ENST00000328848.5@NOP10 ENST00000328848.5 protein_coding 34343020,34341713 34343177,34342108 Gene ID= ENSG00000182117.5 TPM= 121.34 Transcript Type= protein_coding chr15 34358618 34367278 34358618 34367278 - ENST00000314891.10@LPCAT4 ENST00000314891.10 protein_coding 34366987,34365559,34365008,34364194,34364013,34363661,34363422,34362782,34362573,34362196,34361400,34360111,34359589,34358618 34367278,34365701,34365228,34364306,34364073,34363719,34363456,34362836,34362655,34362321,34361532,34360209,34359745,34359302 Gene ID= ENSG00000176454.13 TPM= 19.02 Transcript Type= protein_coding chr15 34379065 34437632 34379065 34437632 - transcript254.chr15.nic@GOLGA8A transcript254.chr15.nic protein_coding 34437398,34435383,34407524,34406674,34404917,34400712,34399155,34398634,34391123,34389644,34387833,34386625,34385740,34385427,34385254,34385048,34383961,34383746,34383441,34382797,34382386,34382151,34381968,34381701,34379065 34437632,34435471,34407735,34406870,34405055,34400759,34399203,34398729,34391426,34389768,34387952,34386741,34385778,34385474,34385338,34385157,34384047,34383853,34383528,34383053,34382529,34382251,34382068,34381856,34381613 Gene ID= ENSG00000175265.17 TPM= 4.07 Transcript Type= NA chr15 34379065 34437857 34379065 34437857 - transcript259.chr15.nic@GOLGA8A transcript259.chr15.nic protein_coding 34437398,34435383,34407524,34406674,34404917,34400712,34399155,34398634,34391123,34389644,34386625,34385740,34385427,34385254,34385048,34383961,34383746,34383441,34382797,34382386,34382151,34381968,34381701,34379065 34437857,34435471,34407735,34406870,34405055,34400759,34399203,34398729,34391426,34389768,34387952,34385778,34385474,34385338,34385157,34384047,34383853,34383528,34383053,34382529,34382251,34382068,34381856,34381613 Gene ID= ENSG00000175265.17 TPM= 11.32 Transcript Type= NA chr15 34525275 34583674 34525275 34583674 - transcript265.chr15.nic@GOLGA8B transcript265.chr15.nic protein_coding 34583516,34553745,34552895,34551138,34546935,34545378,34544858,34537344,34535865,34534054,34532846,34531961,34531648,34531475,34531269,34530182,34529967,34529662,34529018,34528607,34528372,34528189,34527922,34525275 34583674,34553956,34553091,34551276,34546982,34545426,34544953,34537647,34535989,34534173,34532962,34531999,34531695,34531559,34531378,34530268,34530074,34529749,34529274,34528750,34528472,34528289,34528077,34527834 Gene ID= ENSG00000215252.11 TPM= 4.07 Transcript Type= NA chr15 34525275 34583674 34525275 34583674 - transcript267.chr15.nnic@GOLGA8B transcript267.chr15.nnic protein_coding 34583516,34553745,34552895,34551138,34546935,34545378,34544858,34537574,34537344,34535865,34532846,34531961,34531648,34531475,34531269,34530182,34529967,34529662,34529018,34528607,34528372,34528189,34527922,34525275 34583674,34553956,34553091,34551276,34546982,34545426,34544953,34537647,34537486,34535989,34534173,34531999,34531695,34531559,34531378,34530268,34530074,34529749,34529274,34528750,34528472,34528289,34528077,34527834 Gene ID= ENSG00000215252.11 TPM= 5.89 Transcript Type= NA chr15 34788096 34796139 34788096 34796139 - ENST00000290378.4@ACTC1 ENST00000290378.4 protein_coding 34795506,34794680,34793245,34792408,34792090,34791114,34788096 34796139,34794830,34793569,34792569,34792281,34791295,34790555 Gene ID= ENSG00000159251.6 TPM= 1.81 Transcript Type= protein_coding chr15 34851782 34969839 34851782 34969839 - ENST00000156471.9@AQR ENST00000156471.9 protein_coding 34969539,34964234,34960774,34952885,34948264,34944288,34942012,34940899,34938737,34934571,34932318,34930258,34927035,34920332,34918258,34915038,34910135,34906545,34904336,34900622,34897559,34896897,34893663,34890215,34886526,34884525,34882502,34875935,34874677,34873828,34870752,34867524,34862867,34860042,34851782 34969839,34964290,34960814,34952920,34948384,34944428,34942080,34940999,34938813,34934635,34932434,34930371,34927138,34920434,34918378,34915179,34910313,34906712,34904505,34900863,34897705,34896966,34893773,34890324,34886661,34884734,34882639,34876006,34874864,34873999,34870922,34867609,34863041,34860155,34857106 Gene ID= ENSG00000021776.10 TPM= 9.96 Transcript Type= protein_coding chr15 35370882 35546168 35370882 35546168 - ENST00000256538.8@DPH6 ENST00000256538.8 protein_coding 35546119,35542413,35538274,35454747,35450685,35410835,35381822,35373521,35370882 35546168,35542507,35538467,35454820,35450803,35410896,35381916,35373608,35372203 Gene ID= ENSG00000134146.11 TPM= 6.34 Transcript Type= protein_coding chr15 35546195 35859001 35546195 35859001 + ENST00000501169.2@DPH6-AS1 ENST00000501169.2 lincRNA 35546195,35711707,35857987 35546473,35711889,35859001 Gene ID= ENSG00000248079.2 TPM= 1.81 Transcript Type= lincRNA chr15 36579611 36810223 36579611 36810223 + ENST00000566621.5@C15orf41 ENST00000566621.5 protein_coding 36579611,36644278,36645223,36654098,36657833,36691685,36692126,36697323,36709223,36709856,36808324 36579961,36644323,36645287,36654158,36657905,36691764,36692175,36697390,36709288,36709961,36810223 Gene ID= ENSG00000186073.11 TPM= 7.24 Transcript Type= protein_coding chr15 36890227 37100549 36890227 37100549 - transcript302.chr15.nic@MEIS2 transcript302.chr15.nic protein_coding 37099455,37097967,37096289,37095564,37094527,37093581,37083771,37036814,36950324,36896628,36895151,36894717,36890227 37100549,37098199,37096430,37095614,37094577,37093730,37083885,37036959,36950400,36896686,36895240,36894812,36892459 Gene ID= ENSG00000134138.19 TPM= 11.93 Transcript Type= NA chr15 36891026 37100549 36891026 37100549 - transcript310.chr15.nic@MEIS2 transcript310.chr15.nic protein_coding 37099455,37097967,37096289,37095564,37094527,37093581,37083771,37036814,36950324,36896628,36895151,36891026 37100549,37098199,37096430,37095614,37094577,37093730,37083885,37036959,36950400,36896686,36895240,36892459 Gene ID= ENSG00000134138.19 TPM= 4.68 Transcript Type= NA chr15 36891022 37101299 36891022 37101299 - ENST00000340545.9@MEIS2 ENST00000340545.9 protein_coding 37100892,37097967,37096289,37095564,37094527,37093581,37083771,37036814,36950324,36896628,36895151,36894717,36891022 37101299,37098199,37096430,37095614,37094577,37093730,37083885,37036959,36950400,36896686,36895240,36894812,36892459 Gene ID= ENSG00000134138.19 TPM= 8.76 Transcript Type= protein_coding chr15 38454154 38483665 38454154 38483665 + ENST00000491535.5@FAM98B ENST00000491535.5 protein_coding 38454154,38464032,38465269,38470227,38473505,38474182,38481292 38454232,38464177,38465403,38470405,38473585,38474298,38483665 Gene ID= ENSG00000171262.11 TPM= 2.72 Transcript Type= protein_coding chr15 39934153 40035590 39934153 40035590 + ENST00000263791.9@EIF2AK4 ENST00000263791.9 protein_coding 39934153,39939505,39943383,39949116,39953904,39955620,39961784,39965686,39967344,39972908,39973592,39976414,39978078,39985805,39987983,39990273,39992175,39992769,39996964,39998731,40000988,40002713,40003193,40007016,40008027,40009614,40011281,40016502,40017108,40019093,40020899,40022519,40025977,40029406,40030359,40032169,40032757,40034326,40035027 39934339,39939617,39943485,39949268,39953984,39955768,39961899,39965843,39967879,39973014,39973749,39976844,39978147,39985888,39988105,39990377,39992229,39992848,39997065,39998784,40001224,40002788,40003314,40007065,40008195,40009730,40011346,40016672,40017242,40019200,40021027,40022605,40026089,40029464,40030456,40032237,40032801,40034444,40035590 Gene ID= ENSG00000128829.11 TPM= 17.21 Transcript Type= protein_coding chr15 40035739 40039188 40035739 40039188 - ENST00000267884.10@SRP14 ENST00000267884.10 protein_coding 40039093,40038876,40038282,40036986,40035739 40039188,40038948,40038394,40037018,40036500 Gene ID= ENSG00000140319.10 TPM= 486.28 Transcript Type= protein_coding chr15 40036041 40039164 40036041 40039164 - ENST00000558527.5@SRP14 ENST00000558527.5 protein_coding 40039093,40038876,40038282,40037309,40036986,40036041 40039164,40038948,40038394,40037348,40037018,40036500 Gene ID= ENSG00000140319.10 TPM= 8.15 Transcript Type= processed_transcript chr15 40039243 40056998 40039243 40056998 + transcript353.chr15.nnic@SRP14-AS1 transcript353.chr15.nnic lincRNA 40039243,40045961,40056689 40039448,40046069,40056998 Gene ID= ENSG00000248508.6 TPM= 2.72 Transcript Type= NA chr15 40087890 40108874 40087890 40108874 - ENST00000354670.8@BMF ENST00000354670.8 protein_coding 40108773,40108259,40105795,40104180,40087890 40108874,40108386,40106091,40104340,40091888 Gene ID= ENSG00000104081.13 TPM= 4.53 Transcript Type= protein_coding chr15 40161026 40221136 40161026 40221136 + ENST00000287598.10@BUB1B ENST00000287598.10 protein_coding 40161026,40165053,40170062,40170537,40176477,40183714,40185165,40185551,40196545,40199615,40200244,40200931,40202405,40202589,40206184,40208637,40209635,40210110,40212499,40213332,40217496,40218456,40220564 40161255,40165196,40170121,40170681,40176673,40183883,40185379,40185642,40196774,40199727,40200359,40200980,40202465,40202694,40206458,40208770,40209775,40210210,40212648,40213474,40217667,40218562,40221136 Gene ID= ENSG00000156970.12 TPM= 2.72 Transcript Type= protein_coding chr15 40264411 40277487 40264411 40277487 + transcript371.chr15.nic@BUB1B-PAK6 transcript371.chr15.nic protein_coding 40264411,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927,40277116 40264528,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40276105,40277487 Gene ID= ENSG00000259288.6 TPM= 2.72 Transcript Type= NA chr15 40252964 40277488 40252964 40277488 + transcript372.chr15.nic@BUB1B-PAK6 transcript372.chr15.nic protein_coding 40252964,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927 40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40277488 Gene ID= ENSG00000259288.6 TPM= 6.95 Transcript Type= NA chr15 40264411 40277488 40264411 40277488 + transcript373.chr15.nic@BUB1B-PAK6 transcript373.chr15.nic protein_coding 40264411,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927 40264528,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40277488 Gene ID= ENSG00000259288.6 TPM= 11.77 Transcript Type= NA chr15 40252683 40277487 40252683 40277487 + transcript367.chr15.nic@PAK6 transcript367.chr15.nic protein_coding 40252683,40253178,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927,40277116 40253014,40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40276105,40277487 Gene ID= ENSG00000137843.11 TPM= 2.72 Transcript Type= NA chr15 40252632 40277488 40252632 40277488 + transcript368.chr15.nic@PAK6 transcript368.chr15.nic protein_coding 40252632,40253178,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927 40252691,40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40277488 Gene ID= ENSG00000137843.11 TPM= 16.91 Transcript Type= NA chr15 40252811 40277488 40252811 40277488 + transcript369.chr15.nic@PAK6 transcript369.chr15.nic protein_coding 40252811,40253178,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927 40253014,40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40277488 Gene ID= ENSG00000137843.11 TPM= 10.57 Transcript Type= NA chr15 40253184 40277487 40253184 40277487 + ENST00000542403.3@PAK6 ENST00000542403.3 protein_coding 40253184,40264781,40265842,40272224,40272866,40273346,40273551,40274142,40275927,40277116 40253289,40264989,40266495,40272721,40272999,40273472,40273676,40274276,40276105,40277487 Gene ID= ENSG00000137843.11 TPM= 1.81 Transcript Type= protein_coding chr15 40250664 40252910 40250664 40252910 - ENST00000623360.1@C15orf56 ENST00000623360.1 processed_transcript 40252658,40250664 40252910,40252539 Gene ID= ENSG00000176753.5 TPM= 1.81 Transcript Type= antisense_RNA chr15 40358235 40378639 40358235 40378639 + ENST00000267889.4@DISP2 ENST00000267889.4 protein_coding 40358235,40363625,40364226,40364421,40364838,40365147,40365628,40367058 40358440,40363954,40364255,40364544,40364953,40365274,40365725,40378639 Gene ID= ENSG00000140323.5 TPM= 5.43 Transcript Type= protein_coding chr15 40389171 40394538 40389171 40394538 + transcript390.chr15.nic@KNSTRN transcript390.chr15.nic protein_coding 40389171,40389836,40391493,40391949,40393469 40389611,40389929,40391554,40392023,40394538 Gene ID= ENSG00000128944.13 TPM= 3.17 Transcript Type= NA chr15 40382941 40394246 40382941 40394246 + ENST00000608100.5@KNSTRN ENST00000608100.5 protein_coding 40382941,40383228,40386362,40387159,40389506,40389836,40391493,40391949,40393469 40383044,40383322,40386494,40387206,40389611,40389929,40391554,40392023,40394246 Gene ID= ENSG00000128944.13 TPM= 5.89 Transcript Type= protein_coding chr15 40405795 40435953 40405795 40435953 + transcript411.chr15.nic@IVD transcript411.chr15.nic protein_coding 40405795,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40435417 40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40435953 Gene ID= ENSG00000128928.8 TPM= 15.69 Transcript Type= NA chr15 40405794 40421291 40405794 40421291 + transcript413.chr15.nic@IVD transcript413.chr15.nic protein_coding 40405794,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130 40405971,40407812,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40421291 Gene ID= ENSG00000128928.8 TPM= 34.56 Transcript Type= NA chr15 40405795 40421299 40405795 40421299 + ENST00000479013.6@IVD ENST00000479013.6 protein_coding 40405795,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130 40405971,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40421299 Gene ID= ENSG00000128928.8 TPM= 21.89 Transcript Type= protein_coding chr15 40405795 40418767 40405795 40418767 + ENST00000487418.6@IVD ENST00000487418.6 protein_coding 40405795,40407636,40407939,40410628,40411260,40411555,40412991,40414889,40415401,40416078,40416290,40418130 40405971,40407725,40407990,40410797,40411353,40411691,40413087,40414982,40415482,40416182,40416362,40418767 Gene ID= ENSG00000128928.8 TPM= 3.62 Transcript Type= protein_coding chr15 40441122 40468241 40441122 40468241 + transcript429.chr15.nic@BAHD1 transcript429.chr15.nic protein_coding 40441122,40458451,40461915,40463861,40464471,40465344,40465941 40441268,40459896,40462294,40464020,40464547,40465435,40468241 Gene ID= ENSG00000140320.11 TPM= 10.19 Transcript Type= NA chr15 40441320 40468241 40441320 40468241 + transcript432.chr15.nnic@BAHD1 transcript432.chr15.nnic protein_coding 40441320,40458451,40461915,40463861,40464471,40465344,40465941 40441449,40459896,40462294,40464020,40464547,40465435,40468241 Gene ID= ENSG00000140320.11 TPM= 7.47 Transcript Type= NA chr15 40439721 40468229 40439721 40468229 + ENST00000561234.5@BAHD1 ENST00000561234.5 protein_coding 40439721,40458451,40461915,40463861,40464471,40465335,40465941 40439965,40459896,40462294,40464020,40464547,40465435,40468229 Gene ID= ENSG00000140320.11 TPM= 5.66 Transcript Type= protein_coding chr15 40441212 40468242 40441212 40468242 + ENST00000416165.5@BAHD1 ENST00000416165.5 protein_coding 40441212,40458451,40461912,40463861,40464471,40465335,40465941 40441268,40459896,40462294,40464020,40464547,40465435,40468242 Gene ID= ENSG00000140320.11 TPM= 11.09 Transcript Type= protein_coding chr15 40553100 40565074 40553100 40565074 - transcript437.chr15.nnic@CCDC32 transcript437.chr15.nnic protein_coding 40564976,40562772,40557216,40553942,40553100 40565074,40563027,40557372,40554127,40553905 Gene ID= ENSG00000128891.15 TPM= 11.77 Transcript Type= NA chr15 40553104 40565057 40553104 40565057 - ENST00000416810.6@CCDC32 ENST00000416810.6 protein_coding 40564976,40562772,40557216,40553104 40565057,40563027,40557372,40554127 Gene ID= ENSG00000128891.15 TPM= 19.92 Transcript Type= protein_coding chr15 40569300 40574943 40569300 40574943 + ENST00000315616.11@RPUSD2 ENST00000315616.11 protein_coding 40569300,40571604,40573527 40569943,40571900,40574943 Gene ID= ENSG00000166133.17 TPM= 19.92 Transcript Type= protein_coding chr15 40735888 40755260 40735888 40755260 - ENST00000338376.7@RMDN3 ENST00000338376.7 protein_coding 40755083,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735888 40755260,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594 Gene ID= ENSG00000137824.15 TPM= 47.99 Transcript Type= protein_coding chr15 40735885 40755274 40735885 40755274 - transcript454.chr15.nic@RMDN3 transcript454.chr15.nic protein_coding 40755199,40754597,40751986,40751426,40744977,40744047,40740133,40738501,40737965,40737628,40737288,40737124,40735885 40755274,40754790,40752178,40751569,40745259,40744149,40740193,40738576,40738042,40737726,40737341,40737204,40736594 Gene ID= ENSG00000137824.15 TPM= 28.98 Transcript Type= NA chr15 40764020 40767710 40764020 40767710 + ENST00000260447.5@GCHFR ENST00000260447.5 protein_coding 40764020,40765827,40767226 40764216,40765921,40767710 Gene ID= ENSG00000137880.5 TPM= 23.54 Transcript Type= protein_coding chr15 40765155 40807477 40765155 40807477 - ENST00000220496.8@DNAJC17 ENST00000220496.8 protein_coding 40807369,40779928,40779545,40779223,40776542,40776196,40775553,40775031,40774356,40773727,40765155 40807477,40779997,40779603,40779310,40776627,40776292,40775596,40775108,40774436,40773837,40768062 Gene ID= ENSG00000104129.9 TPM= 16.3 Transcript Type= protein_coding chr15 40807070 40814575 40807070 40814575 + transcript467.chr15.nic@ZFYVE19 transcript467.chr15.nic protein_coding 40807070,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148 40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40814575 Gene ID= ENSG00000166140.17 TPM= 4.53 Transcript Type= NA chr15 40807071 40814569 40807071 40814569 + transcript468.chr15.nic@ZFYVE19 transcript468.chr15.nic protein_coding 40807071,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943 40807868,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814569 Gene ID= ENSG00000166140.17 TPM= 2.26 Transcript Type= NA chr15 40807089 40814565 40807089 40814565 + ENST00000564258.5@ZFYVE19 ENST00000564258.5 protein_coding 40807089,40809119,40809408,40809852,40810071,40810649,40812699,40813338,40813713,40813943,40814148 40807671,40809240,40809458,40809970,40810216,40810757,40812902,40813417,40813811,40814070,40814565 Gene ID= ENSG00000166140.17 TPM= 3.17 Transcript Type= protein_coding chr15 40844018 40857655 40844018 40857655 + ENST00000562057.5@SPINT1 ENST00000562057.5 protein_coding 40844018,40844490,40853124,40853489,40853711,40854060,40854397,40854639,40855892,40856276,40856770 40844186,40845029,40853251,40853627,40853881,40854086,40854522,40854689,40856062,40856323,40857655 Gene ID= ENSG00000166145.14 TPM= 1.81 Transcript Type= protein_coding chr15 40894350 40903975 40894350 40903975 + transcript479.chr15.nnic@VPS18 transcript479.chr15.nnic protein_coding 40894350,40895938,40898907,40899144,40899840,40902616 40894859,40896079,40898998,40899208,40901014,40903975 Gene ID= ENSG00000104142.10 TPM= 8.15 Transcript Type= NA chr15 40894430 40903975 40894430 40903975 + ENST00000220509.9@VPS18 ENST00000220509.9 protein_coding 40894430,40895938,40898907,40899144,40902616 40894859,40896079,40898998,40901014,40903975 Gene ID= ENSG00000104142.10 TPM= 66.1 Transcript Type= protein_coding chr15 40929341 40939080 40929341 40939080 + transcript485.chr15.nic@DLL4 transcript485.chr15.nic protein_coding 40929341,40930625,40931503,40932171,40932317,40934548,40934898,40936228,40937418,40938029 40930116,40930682,40931766,40932231,40932447,40934717,40935117,40936930,40937526,40939080 Gene ID= ENSG00000128917.6 TPM= 1.81 Transcript Type= NA chr15 40929393 40939072 40929393 40939072 + ENST00000249749.6@DLL4 ENST00000249749.6 protein_coding 40929393,40929847,40930625,40931503,40932171,40932317,40934548,40934898,40936228,40937418,40938029 40929734,40930116,40930682,40931766,40932231,40932447,40934717,40935117,40936930,40937526,40939072 Gene ID= ENSG00000128917.6 TPM= 4.53 Transcript Type= protein_coding chr15 40978893 41116153 40978893 41116153 - ENST00000401393.7@INO80 ENST00000401393.7 protein_coding 41115973,41096168,41095759,41095601,41092027,41087562,41085369,41081020,41079701,41074370,41073428,41071849,41070467,41069570,41059867,41058639,41056622,41055247,41053929,41049935,41049287,41048212,41047408,41044904,41027596,41020900,41016088,41005593,40997529,40987816,40987091,40985338,40984197,40983762,40982862,40979492,40978893 41116153,41096353,41095928,41095668,41092182,41087682,41085583,41081073,41079904,41074565,41073495,41072058,41070547,41069665,41059926,41058781,41056706,41055364,41054014,41050102,41049420,41048276,41047501,41045075,41027736,41021125,41016215,41005687,40997601,40987974,40987193,40985426,40984352,40983921,40983077,40980440,40979257 Gene ID= ENSG00000128908.15 TPM= 2.72 Transcript Type= protein_coding chr15 41231143 41281890 41231143 41281890 + ENST00000334660.9@CHP1 ENST00000334660.9 protein_coding 41231143,41243667,41256910,41262756,41270557,41278767,41279336 41231449,41243739,41256990,41262883,41270618,41278889,41281890 Gene ID= ENSG00000187446.11 TPM= 53.43 Transcript Type= protein_coding chr15 41283965 41299620 41283965 41299620 + transcript499.chr15.nnic@OIP5-AS1 transcript499.chr15.nnic processed_transcript 41283965,41285225,41286011,41296804,41298041 41284110,41285363,41286100,41297929,41299620 Gene ID= ENSG00000247556.6 TPM= 2.11 Transcript Type= NA chr15 41283965 41301970 41283965 41301970 + transcript501.chr15.nnic@OIP5-AS1 transcript501.chr15.nnic processed_transcript 41283965,41285225,41286011,41298041,41299232 41284110,41285363,41286100,41298769,41301970 Gene ID= ENSG00000247556.6 TPM= 2.11 Transcript Type= NA chr15 41284005 41306534 41284005 41306534 + ENST00000500949.6@OIP5-AS1 ENST00000500949.6 processed_transcript 41284005,41285225,41286011,41298041 41284110,41285363,41286100,41306534 Gene ID= ENSG00000247556.6 TPM= 29.88 Transcript Type= antisense_RNA chr15 41309268 41332621 41309268 41332621 - ENST00000220514.7@OIP5 ENST00000220514.7 protein_coding 41332240,41331915,41319658,41313273,41309268 41332621,41331981,41319780,41313354,41309849 Gene ID= ENSG00000104147.8 TPM= 1.81 Transcript Type= protein_coding chr15 41332694 41381050 41332694 41381050 + ENST00000260359.10@NUSAP1 ENST00000260359.10 protein_coding 41332694,41342386,41349098,41351033,41356039,41358149,41365402,41371527,41375712,41377196,41380093 41333050,41342454,41349241,41351129,41356140,41358258,41365589,41371684,41375828,41377304,41381050 Gene ID= ENSG00000137804.12 TPM= 15.39 Transcript Type= protein_coding chr15 41387351 41402544 41387351 41402544 - transcript511.chr15.nic@NDUFAF1 transcript511.chr15.nic protein_coding 41402447,41396487,41394859,41388448,41387351 41402544,41397140,41395044,41388522,41387593 Gene ID= ENSG00000137806.8 TPM= 23.54 Transcript Type= NA chr15 41387349 41402444 41387349 41402444 - ENST00000260361.8@NDUFAF1 ENST00000260361.8 protein_coding 41402144,41396487,41394859,41388448,41387349 41402444,41397140,41395044,41388522,41387593 Gene ID= ENSG00000137806.8 TPM= 17.21 Transcript Type= protein_coding chr15 41417085 41482979 41417085 41482979 + transcript516.chr15.nnic@RTF1 transcript516.chr15.nnic protein_coding 41417085,41438321,41457672,41464771,41466141,41470257,41471172,41474620,41475525,41475712,41476446,41477165,41477458,41478548,41479103,41480214,41480581 41417313,41438431,41457876,41464885,41466252,41470392,41471349,41474702,41475612,41475819,41476523,41477286,41477515,41478625,41479198,41480325,41482979 Gene ID= ENSG00000137815.14 TPM= 3.62 Transcript Type= NA chr15 41417104 41483563 41417104 41483563 + ENST00000389629.8@RTF1 ENST00000389629.8 protein_coding 41417104,41438321,41452901,41457672,41464771,41466141,41470257,41471172,41474620,41475525,41475712,41476446,41477165,41477458,41478548,41479103,41480214,41480581 41417313,41438431,41453048,41457876,41464885,41466252,41470392,41471349,41474702,41475612,41475819,41476523,41477286,41477515,41478625,41479198,41480325,41483563 Gene ID= ENSG00000137815.14 TPM= 94.18 Transcript Type= protein_coding chr15 41493360 41503548 41493360 41503548 + transcript523.chr15.nnic@ITPKA transcript523.chr15.nnic protein_coding 41493360,41501463,41501635,41501997,41502402,41502788,41503038 41494416,41501559,41501851,41502201,41502503,41502859,41503548 Gene ID= ENSG00000137825.10 TPM= 1.81 Transcript Type= NA chr15 41493875 41503551 41493875 41503551 + ENST00000260386.6@ITPKA ENST00000260386.6 protein_coding 41493875,41501463,41501635,41501997,41502402,41502788,41502963 41494416,41501559,41501851,41502201,41502503,41502859,41503551 Gene ID= ENSG00000137825.10 TPM= 36.22 Transcript Type= protein_coding chr15 41503642 41513806 41503642 41513806 - ENST00000263800.10@LTK ENST00000263800.10 protein_coding 41513667,41512977,41512707,41512115,41511817,41511422,41511164,41509031,41508069,41507562,41507095,41505915,41505713,41505401,41505208,41504972,41504773,41504506,41504342,41503642 41513806,41513120,41512878,41512265,41511963,41511578,41511346,41509129,41508221,41507657,41507290,41506005,41505777,41505530,41505305,41505064,41504874,41504640,41504432,41504244 Gene ID= ENSG00000062524.15 TPM= 1.81 Transcript Type= protein_coding chr15 41525357 41544272 41525357 41544272 - transcript530.chr15.nic@RPAP1 transcript530.chr15.nic protein_coding 41544219,41536945,41536501,41536129,41535512,41534714,41531023,41529864,41529470,41528235,41527860,41527423,41527167,41525357 41544272,41537201,41536649,41536218,41535632,41534935,41531202,41529979,41529568,41528336,41528027,41527605,41527301,41527068 Gene ID= ENSG00000103932.11 TPM= 2.26 Transcript Type= NA chr15 41517176 41544259 41517176 41544259 - ENST00000304330.8@RPAP1 ENST00000304330.8 protein_coding 41544219,41536945,41536501,41536129,41535512,41534714,41531023,41529864,41529470,41528235,41527860,41527423,41527167,41526898,41524991,41524096,41523771,41523245,41522765,41522098,41521738,41520391,41518006,41517798,41517176 41544259,41537201,41536649,41536218,41535632,41534935,41531202,41529979,41529568,41528336,41528027,41527605,41527301,41527068,41525148,41524254,41523972,41523354,41522960,41522250,41521880,41521147,41518182,41517857,41517691 Gene ID= ENSG00000103932.11 TPM= 19.47 Transcript Type= protein_coding chr15 41828085 41837581 41828085 41837581 + ENST00000397299.8@JMJD7 ENST00000397299.8 protein_coding 41828085,41834740,41834970,41835588,41836148,41836475,41836781,41837068 41828188,41834893,41835223,41835644,41836243,41836551,41836940,41837581 Gene ID= ENSG00000243789.10 TPM= 21.73 Transcript Type= protein_coding chr15 41828116 41848143 41828116 41848143 + ENST00000382448.8@JMJD7-PLA2G4B ENST00000382448.8 protein_coding 41828116,41834740,41834970,41835588,41836148,41836475,41840158,41840524,41840774,41841055,41841231,41841517,41841819,41842193,41842554,41843676,41844471,41844848,41845203,41845638,41845943,41846203,41846669,41847337,41847649 41828188,41834893,41835223,41835644,41836243,41836551,41840230,41840660,41840905,41841095,41841273,41841571,41841949,41842276,41842591,41843811,41844607,41845070,41845320,41845775,41846047,41846382,41846835,41847523,41848143 Gene ID= ENSG00000168970.22 TPM= 1.81 Transcript Type= protein_coding chr15 41895939 41972578 41895939 41972578 - ENST00000220325.8@EHD4 ENST00000220325.8 protein_coding 41972259,41953764,41943067,41919210,41909699,41895939 41972578,41953940,41943164,41919622,41909863,41901181 Gene ID= ENSG00000103966.10 TPM= 62.48 Transcript Type= protein_coding chr15 42067632 42085349 42067632 42085349 - transcript560.chr15.nic@PLA2G4D transcript560.chr15.nic protein_coding 42085096,42083716,42083198,42082279,42081797,42081479,42080997,42079537,42072275,42071774,42071444,42071123,42070717,42069909,42067632 42085349,42083779,42083334,42082389,42081834,42081614,42081133,42079759,42072392,42071911,42071551,42071317,42070883,42070095,42068941 Gene ID= ENSG00000159337.6 TPM= 2.72 Transcript Type= NA chr15 42067632 42085349 42067632 42085349 - transcript562.chr15.nic@PLA2G4D transcript562.chr15.nic protein_coding 42085096,42083716,42083198,42082279,42080997,42079537,42072275,42071774,42071444,42071123,42070717,42069909,42067632 42085349,42083779,42083334,42082389,42081133,42079759,42072392,42071911,42071551,42071317,42070883,42070095,42068941 Gene ID= ENSG00000159337.6 TPM= 1.81 Transcript Type= NA chr15 42158702 42208333 42158702 42208333 - transcript569.chr15.nnic@VPS39 transcript569.chr15.nnic protein_coding 42208081,42199896,42191496,42191125,42189114,42187758,42187271,42184517,42178450,42178218,42173723,42169724,42167394,42166772,42166563,42166159,42165718,42164996,42164358,42163626,42163350,42162332,42162032,42161682,42158702 42208333,42199961,42191560,42191167,42189208,42187868,42187363,42184700,42178570,42178338,42173852,42169866,42167537,42166913,42166649,42166232,42165816,42165113,42164486,42163728,42163395,42162481,42162166,42161773,42160829 Gene ID= ENSG00000166887.15 TPM= 5.43 Transcript Type= NA chr15 42158701 42208316 42158701 42208316 - ENST00000318006.9@VPS39 ENST00000318006.9 protein_coding 42208081,42199896,42191496,42191125,42189114,42187758,42187271,42184517,42178450,42178218,42173723,42169724,42167394,42166772,42166563,42166159,42165718,42164996,42164358,42163626,42163350,42162332,42162032,42161682,42158701 42208316,42199961,42191560,42191167,42189208,42187856,42187363,42184700,42178570,42178338,42173852,42169866,42167537,42166913,42166649,42166232,42165816,42165113,42164486,42163728,42163395,42162481,42162166,42161773,42160829 Gene ID= ENSG00000166887.15 TPM= 143.98 Transcript Type= protein_coding chr15 42210536 42273433 42210536 42273433 - transcript584.chr15.nic@TMEM87A transcript584.chr15.nic protein_coding 42273255,42272063,42267947,42264090,42261196,42260958,42244050,42239670,42237432,42236320,42233213,42231844,42228712,42227711,42226806,42220062,42219581,42218323,42217803,42210536 42273433,42272123,42268032,42264203,42261249,42261002,42244167,42239731,42237615,42236419,42233306,42231915,42228820,42227769,42226909,42220135,42219642,42218378,42217833,42211749 Gene ID= ENSG00000103978.15 TPM= 9.96 Transcript Type= NA chr15 42273204 42353665 42273204 42353665 + transcript578.chr15.nic@GANC transcript578.chr15.nic protein_coding 42273204,42274168,42276348,42278482,42287691,42292735,42297611,42306546,42308222,42310283,42310693,42321785,42326298,42327363,42329306,42330576,42338389,42339669,42340690,42343078,42345758,42348103,42349383,42351329,42352030 42273444,42274510,42276410,42278590,42287818,42292917,42297656,42306612,42308318,42310463,42310846,42322020,42326424,42327442,42329449,42330672,42338490,42339912,42340754,42343154,42345832,42348216,42349495,42351432,42353665 Gene ID= ENSG00000214013.9 TPM= 2.72 Transcript Type= NA chr15 42273205 42314885 42273205 42314885 + transcript593.chr15.nic@GANC transcript593.chr15.nic protein_coding 42273205,42276348,42278482,42287691,42292735,42297611,42306546,42308222,42310283,42310693,42314080 42274510,42276410,42278590,42287818,42292917,42297656,42306612,42308318,42310463,42310846,42314885 Gene ID= ENSG00000214013.9 TPM= 1.81 Transcript Type= NA chr15 42273204 42284419 42273204 42284419 + transcript595.chr15.nic@GANC transcript595.chr15.nic protein_coding 42273204,42274168,42276348,42278482,42280917,42283611 42273444,42274510,42276410,42278590,42281133,42284419 Gene ID= ENSG00000214013.9 TPM= 2.72 Transcript Type= NA chr15 42412823 42457532 42412823 42457532 - ENST00000263805.8@ZNF106 ENST00000263805.8 protein_coding 42456958,42449771,42448072,42446589,42444827,42444202,42442073,42439033,42438612,42437232,42435384,42428018,42424834,42423998,42422501,42421917,42421061,42417805,42412823 42457532,42451954,42448705,42446658,42444981,42444262,42442414,42439813,42438667,42437377,42435518,42428134,42425025,42424060,42422620,42421988,42421132,42417951,42417360 Gene ID= ENSG00000103994.16 TPM= 10.87 Transcript Type= protein_coding chr15 42446624 42491138 42446624 42491138 - transcript601.chr15.nic@ZNF106 transcript601.chr15.nic protein_coding 42490980,42472236,42466053,42456958,42449771,42448072,42446624 42491138,42472321,42466114,42457158,42451954,42448705,42446658 Gene ID= ENSG00000103994.16 TPM= 1.81 Transcript Type= NA chr15 42495607 42533058 42495607 42533058 + transcript612.chr15.nic@SNAP23 transcript612.chr15.nic protein_coding 42495607,42511833,42512955,42515237,42528262,42529675,42531413 42495713,42511903,42513447,42515354,42528420,42529819,42533058 Gene ID= ENSG00000092531.9 TPM= 8.15 Transcript Type= NA chr15 42542523 42548789 42542523 42548789 - transcript619.chr15.nic@LRRC57 transcript619.chr15.nic protein_coding 42548693,42548351,42548106,42547261,42542523 42548789,42548456,42548244,42547529,42545262 Gene ID= ENSG00000180979.9 TPM= 1.81 Transcript Type= NA chr15 42542522 42548773 42542522 42548773 - ENST00000397130.7@LRRC57 ENST00000397130.7 protein_coding 42548693,42548351,42548106,42547261,42545077,42542522 42548773,42548456,42548244,42547529,42545262,42544124 Gene ID= ENSG00000180979.9 TPM= 16.75 Transcript Type= protein_coding chr15 42542524 42548772 42542524 42548772 - ENST00000563454.5@LRRC57 ENST00000563454.5 protein_coding 42548667,42548351,42548106,42547261,42545077,42542524 42548772,42548456,42548244,42547529,42545262,42544124 Gene ID= ENSG00000180979.9 TPM= 1.36 Transcript Type= protein_coding chr15 42548810 42569994 42548810 42569994 + ENST00000260372.7@HAUS2 ENST00000260372.7 protein_coding 42548810,42558198,42559339,42561270,42563749,42566607 42548965,42558290,42559408,42561402,42563857,42569994 Gene ID= ENSG00000137814.10 TPM= 8.15 Transcript Type= protein_coding chr15 42723557 42737128 42723557 42737128 - transcript630.chr15.nic@CDAN1 transcript630.chr15.nic protein_coding 42736989,42736302,42735875,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727621,42726310,42726097,42725489,42725144,42723557 42737128,42736780,42736078,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616 Gene ID= ENSG00000140326.12 TPM= 3.62 Transcript Type= NA chr15 42723557 42737130 42723557 42737130 - transcript633.chr15.nnic@CDAN1 transcript633.chr15.nnic protein_coding 42737013,42736302,42736045,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727621,42726310,42726097,42725489,42725144,42723557 42737130,42736780,42736081,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616 Gene ID= ENSG00000140326.12 TPM= 1.81 Transcript Type= NA chr15 42723557 42737130 42723557 42737130 - transcript637.chr15.nnic@CDAN1 transcript637.chr15.nnic protein_coding 42737013,42736302,42735875,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727668,42726310,42726097,42725489,42725144,42723557 42737130,42736780,42736081,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616 Gene ID= ENSG00000140326.12 TPM= 4.53 Transcript Type= NA chr15 42723562 42737126 42723562 42737126 - ENST00000356231.3@CDAN1 ENST00000356231.3 protein_coding 42737013,42736302,42735875,42735510,42735261,42735100,42734226,42733938,42733097,42732333,42731620,42731211,42730925,42730598,42730128,42729796,42729568,42729229,42729023,42728652,42728204,42727955,42727621,42726310,42726097,42725489,42725144,42723562 42737126,42736780,42736078,42735679,42735374,42735178,42734346,42734047,42733186,42732408,42731825,42731331,42731071,42730764,42730215,42729885,42729622,42729362,42729126,42728810,42728267,42728033,42727769,42726417,42726160,42725670,42725251,42724616 Gene ID= ENSG00000140326.12 TPM= 13.58 Transcript Type= protein_coding chr15 42942908 42964641 42942908 42964641 - transcript645.chr15.nnic@UBR1 transcript645.chr15.nnic protein_coding 42964088,42960645,42958013,42952278,42950262,42942908 42964641,42960701,42958090,42952448,42950363,42945470 Gene ID= ENSG00000159459.11 TPM= 4.53 Transcript Type= NA chr15 43133729 43185141 43133729 43185141 + transcript650.chr15.nic@TMEM62 transcript650.chr15.nic protein_coding 43133729,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43178607,43181181,43184260 43133982,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43178711,43181299,43185141 Gene ID= ENSG00000137842.6 TPM= 1.81 Transcript Type= NA chr15 43133729 43185141 43133729 43185141 + transcript656.chr15.nic@TMEM62 transcript656.chr15.nic protein_coding 43133729,43135512,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43181181,43184260 43133982,43135649,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43181299,43185141 Gene ID= ENSG00000137842.6 TPM= 1.81 Transcript Type= NA chr15 43133524 43185146 43133524 43185146 + ENST00000260403.6@TMEM62 ENST00000260403.6 protein_coding 43133524,43134257,43135512,43138574,43146493,43148755,43149029,43151790,43154672,43160681,43169593,43178607,43181181,43184260 43133982,43134368,43135649,43138619,43146634,43148879,43149151,43151945,43154831,43160794,43169677,43178711,43181299,43185146 Gene ID= ENSG00000137842.6 TPM= 9.96 Transcript Type= protein_coding chr15 43185257 43197176 43185257 43197176 + ENST00000300213.8@CCNDBP1 ENST00000300213.8 protein_coding 43185257,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727 43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43197176 Gene ID= ENSG00000166946.13 TPM= 82.86 Transcript Type= protein_coding chr15 43185328 43195164 43185328 43195164 + ENST00000566515.5@CCNDBP1 ENST00000566515.5 protein_coding 43185328,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194081,43194415,43194727 43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194137,43194461,43195164 Gene ID= ENSG00000166946.13 TPM= 57.95 Transcript Type= nonsense_mediated_decay chr15 43185406 43195195 43185406 43195195 + ENST00000563065.5@CCNDBP1 ENST00000563065.5 protein_coding 43185406,43185820,43189199,43190055,43190325,43190966,43191395,43192743,43194415,43194727 43185607,43185879,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43195195 Gene ID= ENSG00000166946.13 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr15 43185439 43195195 43185439 43195195 + ENST00000565296.5@CCNDBP1 ENST00000565296.5 protein_coding 43185439,43185820,43186154,43189199,43190055,43190325,43190966,43191395,43192743,43194081,43194727 43185607,43185879,43186233,43189280,43190151,43190398,43191042,43191675,43192803,43194461,43195195 Gene ID= ENSG00000166946.13 TPM= 4.98 Transcript Type= nonsense_mediated_decay chr15 43358172 43371031 43358172 43371031 - transcript686.chr15.nic@ZSCAN29 transcript686.chr15.nic protein_coding 43370558,43369596,43368923,43366110,43363915,43358172 43371031,43370025,43369127,43366808,43364382,43361941 Gene ID= ENSG00000140265.12 TPM= 6.34 Transcript Type= NA chr15 43371059 43406040 43371059 43406040 + transcript685.chr15.nnic@TUBGCP4 transcript685.chr15.nnic protein_coding 43371059,43376098,43376503,43377014,43377847,43380084,43383303,43385791,43386206,43395107,43395583,43397214,43398041,43400044,43403683,43404413,43405202 43371432,43376226,43376625,43377067,43377903,43380163,43383504,43385956,43386330,43395157,43395688,43397321,43398179,43400221,43403799,43404552,43406040 Gene ID= ENSG00000137822.12 TPM= 1.81 Transcript Type= NA chr15 43407207 43493462 43407207 43493462 - transcript677.chr15.nic@TP53BP1 transcript677.chr15.nic protein_coding 43493037,43492284,43492002,43491669,43480895,43479859,43479397,43477593,43475565,43474673,43469858,43455892,43447366,43446766,43446387,43441526,43438324,43432194,43428016,43421855,43421025,43420305,43416225,43415594,43413119,43409647,43408897,43407943,43407207 43493462,43492468,43492095,43491753,43481022,43480017,43479526,43477759,43475694,43474767,43470066,43457218,43447485,43446914,43446590,43441583,43438416,43432677,43428168,43422126,43421174,43420735,43416416,43415809,43413334,43409741,43409096,43408088,43407570 Gene ID= ENSG00000067369.13 TPM= 8.15 Transcript Type= NA chr15 43528941 43531610 43528941 43531610 + transcript691.chr15.nic@MAP1A transcript691.chr15.nic protein_coding 43528941,43529650,43530069 43529508,43529870,43531610 Gene ID= ENSG00000166963.12 TPM= 2.72 Transcript Type= NA chr15 43533462 43590253 43533462 43590253 - ENST00000420765.5@PPIP5K1 ENST00000420765.5 protein_coding 43590172,43584799,43584358,43583404,43582862,43582564,43582095,43581853,43581227,43581002,43579019,43578070,43577876,43577622,43577453,43577108,43576827,43576371,43574222,43573809,43573357,43573034,43572769,43571724,43571412,43568463,43564867,43564103,43558795,43539470,43533462 43590253,43584892,43584532,43583599,43582952,43582649,43582249,43581954,43581388,43581123,43579120,43578156,43577951,43577731,43577535,43577239,43576948,43576553,43574363,43574032,43573484,43573160,43572876,43571840,43571576,43568553,43564992,43564165,43558932,43539583,43535476 Gene ID= ENSG00000168781.21 TPM= 4.53 Transcript Type= protein_coding chr15 43533463 43590066 43533463 43590066 - transcript694.chr15.nnic@PPIP5K1 transcript694.chr15.nnic protein_coding 43589882,43584358,43583404,43582862,43582564,43582095,43581853,43581227,43581002,43579019,43578070,43577876,43577622,43577453,43577108,43576827,43576371,43574222,43573809,43573357,43573034,43572769,43571724,43571412,43568463,43564867,43564103,43558795,43539470,43533463 43590066,43584532,43583599,43582952,43582649,43582249,43581954,43581388,43581123,43579120,43578156,43577951,43577731,43577535,43577239,43576948,43576553,43574363,43574032,43573484,43573148,43572876,43571840,43571576,43568553,43564992,43564165,43558932,43539583,43535476 Gene ID= ENSG00000168781.21 TPM= 4.53 Transcript Type= NA chr15 43533462 43590201 43533462 43590201 - ENST00000334933.8@PPIP5K1 ENST00000334933.8 protein_coding 43590172,43584358,43583404,43582862,43582564,43582095,43581853,43581227,43581002,43579019,43578070,43577876,43577622,43577453,43577108,43576827,43576371,43574222,43573809,43573357,43573034,43572769,43571724,43571412,43568463,43564867,43558795,43539470,43533462 43590201,43584621,43583599,43582952,43582649,43582249,43581954,43581388,43581123,43579120,43578156,43577951,43577731,43577535,43577239,43576948,43576553,43574363,43574032,43573484,43573148,43572876,43571840,43571576,43568553,43564992,43558932,43539583,43535476 Gene ID= ENSG00000168781.21 TPM= 6.79 Transcript Type= protein_coding chr15 43533462 43590175 43533462 43590175 - ENST00000360301.8@PPIP5K1 ENST00000360301.8 protein_coding 43590172,43584799,43584358,43583404,43582862,43582564,43582095,43581853,43581227,43581002,43579019,43578070,43577876,43577622,43577453,43577108,43576827,43576371,43574222,43573809,43573357,43573034,43572769,43571724,43571412,43568463,43564867,43558795,43539470,43533462 43590175,43584892,43584532,43583599,43582952,43582649,43582249,43581954,43581388,43581123,43579120,43578156,43577951,43577731,43577535,43577239,43576948,43576553,43574363,43574032,43573484,43573148,43572876,43571840,43571576,43568553,43564992,43558932,43539583,43535476 Gene ID= ENSG00000168781.21 TPM= 6.79 Transcript Type= protein_coding chr15 43664177 43690039 43664177 43690039 - transcript712.chr15.nnic@AC011330.1 transcript712.chr15.nnic unprocessed_pseudogene 43690004,43684634,43684193,43683239,43682697,43682399,43681930,43681688,43681062,43680837,43678590,43677635,43677441,43677187,43677018,43676673,43676392,43675936,43673787,43673374,43672922,43672599,43672334,43671289,43670977,43668028,43664177 43690039,43684727,43684367,43683434,43682787,43682484,43682084,43681789,43681223,43680958,43678691,43677721,43677516,43677296,43677100,43676804,43676513,43676118,43673928,43673597,43673049,43672713,43672441,43671405,43671141,43668118,43664543 Gene ID= ENSG00000249839.1 TPM= 1.81 Transcript Type= NA chr15 43746392 43773279 43746392 43773279 + ENST00000300289.9@PDIA3 ENST00000300289.9 protein_coding 43746392,43753824,43756649,43761424,43763077,43765450,43765887,43766728,43768489,43769518,43770250,43770523,43771105 43746706,43753902,43756766,43761531,43763206,43765566,43766012,43766910,43768597,43769646,43770329,43770580,43773279 Gene ID= ENSG00000167004.12 TPM= 529.29 Transcript Type= protein_coding chr15 43772600 43777543 43772600 43777543 - ENST00000319359.7@ELL3 ENST00000319359.7 protein_coding 43776770,43776509,43776039,43775722,43775525,43775306,43774596,43774476,43774182,43773304,43772600 43777543,43776544,43776151,43775923,43775610,43775381,43774773,43774518,43774353,43773348,43773226 Gene ID= ENSG00000128886.11 TPM= 9.06 Transcript Type= protein_coding chr15 43792330 43794444 43792330 43794444 + ENST00000409960.6@SERF2 ENST00000409960.6 protein_coding 43792330,43792975,43793576 43792383,43793083,43794444 Gene ID= ENSG00000140264.19 TPM= 1.81 Transcript Type= protein_coding chr15 43792337 43796089 43792337 43796089 + ENST00000445816.5@SERF2 ENST00000445816.5 protein_coding 43792337,43792975,43793710,43794374 43792383,43793083,43793936,43796089 Gene ID= ENSG00000140264.19 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr15 43792347 43794046 43792347 43794046 + ENST00000339624.9@SERF2 ENST00000339624.9 protein_coding 43792347,43792975,43793687 43792383,43793083,43794046 Gene ID= ENSG00000140264.19 TPM= 6.34 Transcript Type= protein_coding chr15 43792368 43794046 43792368 43794046 + ENST00000403425.5@SERF2 ENST00000403425.5 protein_coding 43792368,43792975,43793710 43792611,43793083,43794046 Gene ID= ENSG00000140264.19 TPM= 37.13 Transcript Type= protein_coding chr15 43792839 43794046 43792839 43794046 + ENST00000409614.1@SERF2 ENST00000409614.1 protein_coding 43792839,43793710 43793083,43794046 Gene ID= ENSG00000140264.19 TPM= 29.88 Transcript Type= protein_coding chr15 43804492 43824802 43804492 43824802 - ENST00000267812.3@MFAP1 ENST00000267812.3 protein_coding 43824491,43817229,43814945,43814501,43813249,43812987,43809755,43805376,43804492 43824802,43817448,43815074,43814688,43813357,43813147,43809914,43805465,43805276 Gene ID= ENSG00000140259.6 TPM= 76.97 Transcript Type= protein_coding chr15 43870765 43924312 43870765 43924312 - transcript742.chr15.nnic@FRMD5 transcript742.chr15.nnic protein_coding 43924205,43919767,43919459,43909882,43905828,43902175,43891981,43888809,43888175,43885681,43884727,43883703,43874119,43873171,43870765 43924312,43919809,43919537,43909979,43905951,43902262,43892069,43888872,43888266,43885755,43884795,43883809,43874462,43873222,43872820 Gene ID= ENSG00000171877.20 TPM= 2.72 Transcript Type= NA chr15 43870764 44195231 43870764 44195231 - ENST00000417257.5@FRMD5 ENST00000417257.5 protein_coding 44194953,43924205,43919767,43919459,43909882,43905828,43902175,43891981,43888809,43888175,43885681,43884727,43883703,43870764 44195231,43924309,43919809,43919537,43909979,43905951,43902262,43892069,43888872,43888266,43885755,43884795,43883809,43874462 Gene ID= ENSG00000171877.20 TPM= 11.77 Transcript Type= protein_coding chr15 44288738 44308536 44288738 44308536 + ENST00000429162.2@CASC4 ENST00000429162.2 protein_coding 44288738,44307238 44289356,44308536 Gene ID= ENSG00000166734.18 TPM= 1.81 Transcript Type= processed_transcript chr15 44288731 44415758 44288731 44415758 + ENST00000299957.10@CASC4 ENST00000299957.10 protein_coding 44288731,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44402887,44413336 44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44403054,44415758 Gene ID= ENSG00000166734.18 TPM= 60.22 Transcript Type= protein_coding chr15 44288760 44415757 44288760 44415757 + ENST00000345795.6@CASC4 ENST00000345795.6 protein_coding 44288760,44322965,44328685,44331988,44337763,44338237,44379690,44380806,44413336 44289356,44323019,44328787,44332078,44337907,44338317,44379788,44380976,44415757 Gene ID= ENSG00000166734.18 TPM= 41.2 Transcript Type= protein_coding chr15 44533493 44536923 44533493 44536923 - ENST00000313807.4@EIF3J-AS1 ENST00000313807.4 lincRNA 44536043,44533493 44536923,44535474 Gene ID= ENSG00000179523.4 TPM= 7.24 Transcript Type= lincRNA chr15 44537057 44562803 44537057 44562803 + ENST00000261868.9@EIF3J ENST00000261868.9 protein_coding 44537057,44537324,44550876,44551431,44554553,44557489,44560249,44561018 44537237,44537427,44550930,44551522,44554667,44557650,44560322,44562803 Gene ID= ENSG00000104131.12 TPM= 55.24 Transcript Type= protein_coding chr15 44656820 44663680 44656820 44663680 - transcript775.chr15.nic@SPG11 transcript775.chr15.nic protein_coding 44663391,44660432,44656820 44663680,44660616,44659303 Gene ID= ENSG00000104133.14 TPM= 1.81 Transcript Type= NA chr15 44562696 44663664 44562696 44663664 - ENST00000261866.11@SPG11 ENST00000261866.11 protein_coding 44663391,44660432,44659079,44657095,44652129,44651491,44648866,44633505,44629233,44628669,44626331,44622728,44622220,44621759,44620190,44615363,44613430,44610840,44608444,44606025,44600467,44598631,44598265,44596784,44596083,44595259,44592331,44589252,44585636,44583814,44574902,44573547,44572683,44570525,44569398,44567424,44566217,44565854,44564547,44562696 44663664,44660616,44659303,44657296,44652266,44651939,44649011,44633637,44629388,44628844,44626507,44622799,44622347,44621934,44620403,44615566,44613536,44610985,44608605,44606091,44600632,44598836,44598373,44596943,44596355,44595459,44592438,44589414,44585850,44584558,44575041,44573745,44572820,44570658,44569505,44567592,44566305,44566009,44564698,44563301 Gene ID= ENSG00000104133.14 TPM= 3.62 Transcript Type= protein_coding chr15 44711477 44718877 44711477 44718877 + ENST00000558401.5@B2M ENST00000558401.5 protein_coding 44711477,44715423,44716329,44717607 44711613,44715701,44716356,44718877 Gene ID= ENSG00000166710.17 TPM= 2478.48 Transcript Type= protein_coding chr15 44729049 44734005 44729049 44734005 + transcript793.chr15.nnic@TRIM69 transcript793.chr15.nnic protein_coding 44729049,44731363,44733577 44729552,44732929,44734005 Gene ID= ENSG00000185880.12 TPM= 13.13 Transcript Type= NA chr15 44729001 44734000 44729001 44734000 + ENST00000560141.2@TRIM69 ENST00000560141.2 protein_coding 44729001,44731363 44729552,44734000 Gene ID= ENSG00000185880.12 TPM= 13.13 Transcript Type= processed_transcript chr15 45129933 45165576 45129933 45165576 + ENST00000321429.8@DUOX1 ENST00000321429.8 protein_coding 45129933,45131471,45131918,45133864,45134145,45135104,45135474,45135782,45136350,45136529,45137924,45139066,45139427,45140895,45141292,45141975,45143190,45144036,45144895,45147433,45147904,45148272,45150632,45151123,45151874,45152286,45153380,45153951,45155802,45160837,45161738,45162219,45163532,45163790,45164779 45130098,45131662,45132024,45133947,45134309,45135291,45135675,45135948,45136410,45136625,45138014,45139168,45139599,45141070,45141410,45142112,45143303,45144235,45145080,45147658,45147997,45148447,45150701,45151248,45152052,45152516,45153479,45154000,45155929,45160990,45161970,45162377,45163687,45163918,45165576 Gene ID= ENSG00000137857.17 TPM= 2.26 Transcript Type= protein_coding chr15 45111467 45165576 45111467 45165576 + transcript805.chr15.nnic@DUOX1 transcript805.chr15.nnic protein_coding 45111467,45135211,45135474,45135782,45136350,45136529,45137924,45139066,45139427,45140895,45141292,45141975,45143190,45144036,45144895,45147433,45147904,45148272,45150632,45151123,45151874,45152286,45153380,45153951,45155802,45160837,45161738,45162219,45163532,45163790,45164779 45111587,45135291,45135675,45135948,45136410,45136625,45138014,45139168,45139599,45141070,45141410,45142112,45143303,45144235,45145080,45147658,45147997,45148447,45150701,45151248,45152052,45152516,45153479,45154000,45155929,45160990,45161970,45162377,45163687,45163918,45165576 Gene ID= ENSG00000137857.17 TPM= 3.62 Transcript Type= NA chr15 45129994 45165574 45129994 45165574 + ENST00000389037.7@DUOX1 ENST00000389037.7 protein_coding 45129994,45131918,45133864,45134145,45135104,45135474,45135782,45136350,45136529,45137924,45139066,45139427,45140895,45141292,45141975,45143190,45144036,45144895,45147433,45147904,45148272,45150632,45151123,45151874,45152286,45153380,45153951,45155802,45160837,45161738,45162219,45163532,45163790,45164779 45130098,45132024,45133947,45134309,45135291,45135675,45135948,45136410,45136625,45138014,45139168,45139599,45141070,45141410,45142112,45143303,45144235,45145080,45147658,45147997,45148447,45150701,45151248,45152052,45152516,45153479,45154000,45155929,45160990,45161970,45162377,45163687,45163918,45165574 Gene ID= ENSG00000137857.17 TPM= 12.22 Transcript Type= protein_coding chr15 45165572 45187985 45165572 45187985 - transcript819.chr15.nic@SHF transcript819.chr15.nic protein_coding 45187454,45178165,45175219,45172147,45171883,45165572 45187985,45178306,45175425,45172318,45172002,45168133 Gene ID= ENSG00000138606.19 TPM= 8.15 Transcript Type= NA chr15 45167251 45187952 45167251 45187952 - ENST00000560734.5@SHF ENST00000560734.5 protein_coding 45187454,45178165,45175219,45167251 45187952,45178306,45175425,45168133 Gene ID= ENSG00000138606.19 TPM= 8.15 Transcript Type= protein_coding chr15 45167214 45187956 45167214 45187956 - ENST00000560540.5@SHF ENST00000560540.5 protein_coding 45187454,45178165,45175219,45172149,45171883,45167214 45187956,45178306,45175425,45172318,45172002,45168133 Gene ID= ENSG00000138606.19 TPM= 8.15 Transcript Type= protein_coding chr15 45361124 45378793 45361124 45378793 - ENST00000396659.7@GATM ENST00000396659.7 protein_coding 45378385,45376601,45369326,45368070,45366371,45366046,45364797,45363900,45361124 45378793,45376819,45369521,45368260,45366508,45366210,45364860,45364016,45362221 Gene ID= ENSG00000171766.15 TPM= 49.8 Transcript Type= protein_coding chr15 45402331 45421419 45402331 45421419 + ENST00000305560.10@SPATA5L1 ENST00000305560.10 protein_coding 45402331,45405320,45410372,45414571,45415587,45417269,45418557,45421043 45403518,45405505,45410530,45414780,45415779,45417399,45418682,45421419 Gene ID= ENSG00000171763.18 TPM= 22.64 Transcript Type= protein_coding chr15 45402375 45421327 45402375 45421327 + ENST00000531970.5@SPATA5L1 ENST00000531970.5 protein_coding 45402375,45405320,45410372,45414571,45415587,45417269,45418557,45421043 45403518,45405505,45410530,45414780,45415809,45417399,45418682,45421327 Gene ID= ENSG00000171763.18 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr15 45587123 45609711 45587123 45609711 + ENST00000220531.7@BLOC1S6 ENST00000220531.7 protein_coding 45587123,45592135,45603100,45605428,45606395 45587525,45592276,45603187,45605514,45609711 Gene ID= ENSG00000104164.10 TPM= 51.62 Transcript Type= protein_coding chr15 45634738 45691286 45634738 45691286 + transcript847.chr15.nic@SQOR transcript847.chr15.nic protein_coding 45634738,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973 45634894,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691286 Gene ID= ENSG00000137767.13 TPM= 6.34 Transcript Type= NA chr15 45634740 45691294 45634740 45691294 + ENST00000260324.11@SQOR ENST00000260324.11 protein_coding 45634740,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973 45635108,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691294 Gene ID= ENSG00000137767.13 TPM= 69.73 Transcript Type= protein_coding chr15 45634780 45691286 45634780 45691286 + transcript849.chr15.nnic@SQOR transcript849.chr15.nnic protein_coding 45634780,45658907,45661955,45669928,45673607,45676101,45682478,45688337,45689039,45690973 45636148,45659157,45662125,45669981,45673801,45676310,45682661,45688404,45689217,45691286 Gene ID= ENSG00000137767.13 TPM= 2.72 Transcript Type= NA chr15 48134631 48178517 48134631 48178517 - ENST00000324324.11@MYEF2 ENST00000324324.11 protein_coding 48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48152234,48151874,48151473,48151100,48149163,48149032,48134631 48178517,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151942,48151571,48151171,48149371,48149083,48143071 Gene ID= ENSG00000104177.17 TPM= 2.72 Transcript Type= protein_coding chr15 48141798 48178371 48141798 48178371 - transcript851.chr15.nic@MYEF2 transcript851.chr15.nic protein_coding 48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48151874,48151473,48151100,48149163,48149032,48141798 48178371,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151571,48151171,48149371,48149083,48143071 Gene ID= ENSG00000104177.17 TPM= 1.81 Transcript Type= NA chr15 48141797 48178353 48141797 48178353 - ENST00000267836.10@MYEF2 ENST00000267836.10 protein_coding 48178077,48168631,48167349,48166121,48165933,48159613,48158769,48158175,48157993,48153792,48152234,48151874,48151473,48149163,48149032,48141797 48178353,48168839,48167401,48166128,48166026,48159804,48158922,48158224,48158056,48153893,48152284,48151942,48151571,48149371,48149083,48143071 Gene ID= ENSG00000104177.17 TPM= 6.34 Transcript Type= protein_coding chr15 48331423 48343373 48331423 48343373 + ENST00000331200.7@DUT ENST00000331200.7 protein_coding 48331423,48332268,48334417,48336046,48341289,48341515,48342022 48331795,48332406,48334508,48336090,48341363,48341585,48343373 Gene ID= ENSG00000128951.13 TPM= 115.91 Transcript Type= protein_coding chr15 48408306 48645849 48408306 48645849 - ENST00000316623.9@FBN1 ENST00000316623.9 protein_coding 48645575,48644606,48613010,48610728,48600139,48596283,48537611,48534080,48526130,48520659,48516183,48515387,48513549,48510044,48508582,48505025,48503787,48498985,48497266,48496100,48495469,48495123,48494204,48492461,48489851,48488368,48488113,48487312,48487075,48485374,48483818,48481655,48474528,48474255,48472551,48470634,48468412,48467938,48465790,48465568,48463899,48463082,48460246,48456637,48452562,48448768,48446706,48445376,48444541,48441721,48437768,48437322,48436961,48434594,48432866,48430671,48428346,48427567,48425739,48425369,48421952,48421558,48420687,48415536,48412569,48408306 48645849,48644950,48613092,48610826,48600234,48596378,48537808,48534205,48526255,48520817,48516362,48515527,48513668,48510169,48508704,48505147,48503939,48499038,48497391,48496225,48495588,48495260,48494254,48492586,48490078,48488493,48488241,48487437,48487200,48485496,48483943,48481780,48474650,48474377,48472676,48470756,48468534,48468102,48465858,48465693,48464021,48463240,48460317,48456762,48452684,48448893,48446822,48445504,48444660,48441846,48437917,48437387,48437077,48434713,48432988,48430802,48428471,48427773,48425864,48425491,48422068,48421686,48420806,48415767,48412743,48411379 Gene ID= ENSG00000166147.13 TPM= 7.24 Transcript Type= protein_coding chr15 49122728 49155652 49122728 49155652 - ENST00000388901.9@COPS2 ENST00000388901.9 protein_coding 49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49122728 49155652,49145078,49144304,49139653,49137437,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094 Gene ID= ENSG00000166200.14 TPM= 52.97 Transcript Type= protein_coding chr15 49127350 49155661 49127350 49155661 - ENST00000299259.10@COPS2 ENST00000299259.10 protein_coding 49155525,49144965,49144227,49139528,49137348,49137150,49134340,49133930,49133759,49130719,49129477,49128702,49127350 49155661,49145078,49144304,49139653,49137458,49137227,49134514,49134108,49133811,49130816,49129559,49128760,49128094 Gene ID= ENSG00000166200.14 TPM= 20.37 Transcript Type= protein_coding chr15 49155774 49328722 49155774 49328722 + transcript877.chr15.nic@GALK2 transcript877.chr15.nic protein_coding 49155774,49161740,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952 49156016,49161861,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49328722 Gene ID= ENSG00000156958.14 TPM= 7.24 Transcript Type= NA chr15 49155765 49331882 49155765 49331882 + ENST00000327171.7@GALK2 ENST00000327171.7 protein_coding 49155765,49201162,49217190,49235851,49239221,49281987,49283566,49292327,49319604,49327952 49156016,49201250,49217313,49235941,49239367,49282085,49283718,49292537,49319805,49331882 Gene ID= ENSG00000156958.14 TPM= 20.83 Transcript Type= protein_coding chr15 49576138 49620823 49576138 49620823 - transcript893.chr15.nic@FAM227B transcript893.chr15.nic protein_coding 49620700,49615121,49611215,49589776,49588016,49577629,49577172,49576138 49620823,49615243,49611268,49590007,49588083,49577664,49577305,49576845 Gene ID= ENSG00000166262.15 TPM= 1.81 Transcript Type= NA chr15 49858242 50113379 49858242 50113379 - transcript903.chr15.nic@ATP8B4 transcript903.chr15.nic protein_coding 50113198,50106939,50074127,50047351,50044594,50038768,50010845,50002153,49996677,49987391,49981206,49979617,49972582,49961977,49934017,49931119,49923379,49920246,49918839,49916934,49901092,49898068,49897292,49879376,49876278,49866346,49862245,49858242 50113379,50107008,50074185,50047464,50044692,50038829,50010917,50002223,49996759,49987549,49981294,49979813,49972790,49962020,49934182,49931307,49923494,49920410,49918950,49917039,49901239,49898251,49897515,49879459,49876523,49866484,49862375,49860475 Gene ID= ENSG00000104043.14 TPM= 1.81 Transcript Type= NA chr15 50182196 50236395 50182196 50236395 + ENST00000267842.9@SLC27A2 ENST00000267842.9 protein_coding 50182196,50197500,50202487,50205239,50222965,50225988,50226980,50228945,50233868,50235920 50182905,50197709,50202645,50205363,50223159,50226078,50227178,50229042,50233998,50236395 Gene ID= ENSG00000140284.10 TPM= 34.41 Transcript Type= protein_coding chr15 50277256 50355440 50277256 50355440 - transcript909.chr15.nic@GABPB1 transcript909.chr15.nic protein_coding 50354985,50346372,50309691,50303966,50302929,50301257,50300789,50289483,50286068,50277256 50355440,50346395,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784 Gene ID= ENSG00000104064.16 TPM= 5.43 Transcript Type= NA chr15 50275392 50355408 50275392 50355408 - ENST00000380877.7@GABPB1 ENST00000380877.7 protein_coding 50354985,50309691,50303966,50302929,50301257,50300789,50289483,50286068,50275392 50355408,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784 Gene ID= ENSG00000104064.16 TPM= 9.96 Transcript Type= protein_coding chr15 50277263 50355153 50277263 50355153 - ENST00000220429.12@GABPB1 ENST00000220429.12 protein_coding 50354985,50309691,50303966,50302929,50301221,50300789,50289483,50286068,50277263 50355153,50309798,50304133,50303123,50301368,50300902,50289668,50286183,50278784 Gene ID= ENSG00000104064.16 TPM= 6.34 Transcript Type= protein_coding chr15 50424399 50499779 50424399 50499779 + transcript914.chr15.nic@USP8 transcript914.chr15.nic protein_coding 50424399,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424514,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499779 Gene ID= ENSG00000138592.13 TPM= 4.75 Transcript Type= NA chr15 50424400 50499768 50424400 50499768 + transcript915.chr15.nic@USP8 transcript915.chr15.nic protein_coding 50424400,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424654,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499768 Gene ID= ENSG00000138592.13 TPM= 2.49 Transcript Type= NA chr15 50424399 50501082 50424399 50501082 + transcript917.chr15.nic@USP8 transcript917.chr15.nic protein_coding 50424399,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424514,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50501082 Gene ID= ENSG00000138592.13 TPM= 4.83 Transcript Type= NA chr15 50424400 50501082 50424400 50501082 + transcript918.chr15.nic@USP8 transcript918.chr15.nic protein_coding 50424400,50432338,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424654,50432499,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50501082 Gene ID= ENSG00000138592.13 TPM= 3.47 Transcript Type= NA chr15 50424382 50514419 50424382 50514419 + ENST00000396444.7@USP8 ENST00000396444.7 protein_coding 50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424654,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50514419 Gene ID= ENSG00000138592.13 TPM= 8.38 Transcript Type= protein_coding chr15 50424385 50499768 50424385 50499768 + transcript921.chr15.nic@USP8 transcript921.chr15.nic protein_coding 50424385,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499768 Gene ID= ENSG00000138592.13 TPM= 8.45 Transcript Type= NA chr15 50424382 50499776 50424382 50499776 + ENST00000307179.8@USP8 ENST00000307179.8 protein_coding 50424382,50439009,50441349,50449400,50459000,50462280,50465047,50471633,50476849,50477276,50481481,50484275,50489801,50490263,50492701,50494070,50495848,50497089,50498596,50498903 50424514,50439177,50441493,50449485,50459162,50462322,50465191,50471795,50476993,50477499,50482065,50484361,50489881,50490525,50492913,50494280,50496084,50497231,50498728,50499776 Gene ID= ENSG00000138592.13 TPM= 9.28 Transcript Type= protein_coding chr15 50557158 50686815 50557158 50686815 - ENST00000313478.11@TRPM7 ENST00000313478.11 protein_coding 50686531,50662967,50657781,50648687,50643340,50639424,50637422,50634382,50632869,50631417,50628149,50624166,50619745,50614123,50613707,50612549,50611093,50609806,50609581,50607200,50604866,50599122,50596255,50594429,50593617,50591911,50589592,50586392,50583089,50580874,50578639,50575869,50575724,50574852,50574637,50574274,50570104,50569887,50557158 50686815,50663046,50657819,50648885,50643553,50639548,50637593,50634556,50632992,50631489,50628249,50624300,50619798,50614263,50613841,50612829,50611321,50609961,50609724,50607328,50605144,50599296,50596381,50594613,50593749,50592626,50589656,50586488,50583159,50580908,50578664,50575919,50575789,50575135,50574719,50574479,50570155,50569993,50561808 Gene ID= ENSG00000092439.13 TPM= 1.81 Transcript Type= protein_coding chr15 50705486 50765948 50705486 50765948 - transcript930.chr15.nnic@SPPL2A transcript930.chr15.nnic protein_coding 50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50719940,50707524,50705486 50765948,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50720100,50707874,50706124 Gene ID= ENSG00000138600.9 TPM= 52.52 Transcript Type= NA chr15 50707570 50765685 50707570 50765685 - transcript931.chr15.nnic@SPPL2A transcript931.chr15.nnic protein_coding 50765468,50749636,50748688,50748113,50747495,50739680,50736644,50736101,50732603,50730965,50726321,50725221,50722124,50707570 50765685,50749746,50748870,50748202,50747628,50739828,50736740,50736202,50732684,50731039,50726377,50725323,50722201,50707874 Gene ID= ENSG00000138600.9 TPM= 2.72 Transcript Type= NA chr15 50908673 51005900 50908673 51005900 + ENST00000261842.9@AP4E1 ENST00000261842.9 protein_coding 50908673,50912078,50915448,50923931,50925098,50929009,50930805,50934624,50941442,50941666,50948020,50949826,50950051,50958492,50968263,50984022,50993370,50997326,50999072,51001026,51002502 50908928,50912149,50915571,50924004,50925219,50929168,50930971,50934697,50941564,50941775,50948159,50949938,50950169,50958794,50968377,50984145,50993625,50997883,50999262,51001183,51005900 Gene ID= ENSG00000081014.10 TPM= 3.62 Transcript Type= protein_coding chr15 51341629 51408013 51341629 51408013 + ENST00000335449.10@GLDN ENST00000335449.10 protein_coding 51341629,51377449,51383436,51383785,51394835,51397470,51400192,51400373,51401593,51404277 51342047,51377500,51383453,51383892,51394981,51397598,51400275,51400498,51401743,51408013 Gene ID= ENSG00000186417.13 TPM= 7.24 Transcript Type= protein_coding chr15 51723072 51738101 51723072 51738101 - transcript945.chr15.nnic@LYSMD2 transcript945.chr15.nnic protein_coding 51737350,51724790,51723072 51738101,51724991,51723649 Gene ID= ENSG00000140280.13 TPM= 1.81 Transcript Type= NA chr15 51723011 51738137 51723011 51738137 - ENST00000267838.6@LYSMD2 ENST00000267838.6 protein_coding 51737350,51724790,51723011 51738137,51725121,51723649 Gene ID= ENSG00000140280.13 TPM= 40.75 Transcript Type= protein_coding chr15 51751561 51816368 51751561 51816368 + ENST00000249700.8@TMOD2 ENST00000249700.8 protein_coding 51751561,51766373,51768262,51773712,51776932,51781044,51782721,51798197,51806377,51808420 51751712,51766567,51768418,51773834,51777018,51781174,51782828,51798340,51806521,51816368 Gene ID= ENSG00000128872.9 TPM= 7.24 Transcript Type= protein_coding chr15 51829630 51915725 51829630 51915725 + ENST00000308580.11@TMOD3 ENST00000308580.11 protein_coding 51829630,51862811,51869217,51887589,51889056,51893815,51896419,51900155,51901892,51908776 51829836,51863010,51869373,51887711,51889145,51893945,51896526,51900298,51902036,51915725 Gene ID= ENSG00000138594.13 TPM= 50.71 Transcript Type= protein_coding chr15 51938025 51971806 51938025 51971806 - ENST00000299601.9@LEO1 ENST00000299601.9 protein_coding 51971688,51965749,51962389,51960639,51959899,51958742,51954481,51953129,51951844,51949808,51947292,51938025 51971806,51966504,51962493,51960733,51960044,51958826,51954575,51953263,51951979,51949994,51947389,51938260 Gene ID= ENSG00000166477.12 TPM= 28.07 Transcript Type= protein_coding chr15 52019201 52067372 52019201 52067372 + ENST00000261845.6@MAPK6 ENST00000261845.6 protein_coding 52019201,52045830,52049993,52058633,52061299,52063902 52019376,52047015,52050137,52058797,52061500,52067372 Gene ID= ENSG00000069956.11 TPM= 7.24 Transcript Type= protein_coding chr15 52109263 52112775 52109263 52112775 - ENST00000260442.3@BCL2L10 ENST00000260442.3 protein_coding 52112238,52109263 52112775,52109973 Gene ID= ENSG00000137875.4 TPM= 5.43 Transcript Type= protein_coding chr15 52122206 52180001 52122206 52180001 - ENST00000358784.11@GNB5 ENST00000358784.11 protein_coding 52179768,52153940,52149884,52147459,52141140,52135613,52133378,52128196,52125948,52124473,52122206 52180001,52154076,52149925,52147535,52141272,52135756,52133469,52128244,52126044,52124639,52122768 Gene ID= ENSG00000069966.18 TPM= 2.72 Transcript Type= protein_coding chr15 52250987 52295915 52250987 52295915 - transcript964.chr15.nic@MYO5C transcript964.chr15.nic protein_coding 52295610,52282782,52279509,52278873,52275562,52272580,52271763,52269753,52264190,52260862,52256639,52253317,52250987 52295915,52282892,52279674,52279017,52275718,52272723,52271844,52269860,52264296,52261127,52256720,52253457,52251515 Gene ID= ENSG00000128833.12 TPM= 1.81 Transcript Type= NA chr15 52192322 52295798 52192322 52295798 - ENST00000261839.11@MYO5C ENST00000261839.11 protein_coding 52295610,52282782,52279509,52278873,52275562,52272580,52271763,52269753,52264190,52260862,52256639,52253317,52251390,52248700,52247458,52246917,52245956,52245354,52244356,52242048,52239733,52237482,52235670,52232622,52229133,52225439,52225075,52224901,52223544,52221162,52219759,52218519,52214603,52213188,52211730,52208554,52205816,52204865,52196309,52195377,52192322 52295798,52282892,52279674,52279017,52275718,52272723,52271844,52269860,52264296,52261127,52256720,52253457,52251515,52248783,52247592,52247014,52246042,52245465,52244567,52242213,52239879,52237646,52235763,52232685,52229313,52225532,52225138,52224981,52223724,52221255,52219822,52218687,52214690,52213286,52211884,52208643,52205966,52205147,52196483,52195457,52194054 Gene ID= ENSG00000128833.12 TPM= 2.72 Transcript Type= protein_coding chr15 52547045 52569239 52547045 52569239 - ENST00000566423.5@ARPP19 ENST00000566423.5 protein_coding 52569116,52568848,52557100,52547045 52569239,52568902,52557222,52552104 Gene ID= ENSG00000128989.10 TPM= 22.19 Transcript Type= protein_coding chr15 52547244 52569164 52547244 52569164 - ENST00000249822.8@ARPP19 ENST00000249822.8 protein_coding 52568848,52557100,52547244 52569164,52557222,52552104 Gene ID= ENSG00000128989.10 TPM= 55.69 Transcript Type= protein_coding chr15 52581657 52679384 52581657 52679384 - transcript977.chr15.nic@FAM214A transcript977.chr15.nic protein_coding 52678828,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587056,52584745,52581657 52679384,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307 Gene ID= ENSG00000047346.12 TPM= 1.81 Transcript Type= NA chr15 52581333 52679368 52581333 52679368 - transcript978.chr15.nic@FAM214A transcript978.chr15.nic protein_coding 52678430,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587151,52584745,52581333 52679368,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307 Gene ID= ENSG00000047346.12 TPM= 3.62 Transcript Type= NA chr15 52581333 52679026 52581333 52679026 - transcript980.chr15.nic@FAM214A transcript980.chr15.nic protein_coding 52678828,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587151,52584745,52581333 52679026,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307 Gene ID= ENSG00000047346.12 TPM= 3.62 Transcript Type= NA chr15 52581670 52679366 52581670 52679366 - transcript981.chr15.nic@FAM214A transcript981.chr15.nic protein_coding 52679276,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587151,52584745,52581670 52679366,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307 Gene ID= ENSG00000047346.12 TPM= 1.81 Transcript Type= NA chr15 52656139 52679384 52656139 52679384 - transcript985.chr15.nic@FAM214A transcript985.chr15.nic protein_coding 52678828,52678006,52656139 52679384,52678122,52658797 Gene ID= ENSG00000047346.12 TPM= 1.81 Transcript Type= NA chr15 52581321 52678623 52581321 52678623 - ENST00000261844.11@FAM214A ENST00000261844.11 protein_coding 52678572,52678006,52613673,52611575,52611130,52608568,52605133,52601086,52600127,52593578,52587151,52584745,52581321 52678623,52678122,52613857,52611777,52611255,52610383,52605246,52601165,52600235,52593736,52587219,52584944,52582307 Gene ID= ENSG00000047346.12 TPM= 3.62 Transcript Type= protein_coding chr15 55202969 55289845 55202969 55289845 - transcript988.chr15.nic@RAB27A transcript988.chr15.nic protein_coding 55289716,55270165,55238403,55234782,55230401,55228609,55223889,55202969 55289845,55270284,55238491,55234956,55230486,55228712,55224012,55205705 Gene ID= ENSG00000069974.15 TPM= 5.13 Transcript Type= NA chr15 55202969 55289815 55202969 55289815 - transcript992.chr15.nnic@RAB27A transcript992.chr15.nnic protein_coding 55289716,55234782,55230401,55228609,55223889,55202969 55289815,55234956,55230486,55228712,55224012,55205705 Gene ID= ENSG00000069974.15 TPM= 4.23 Transcript Type= NA chr15 55202969 55289815 55202969 55289815 - ENST00000336787.5@RAB27A ENST00000336787.5 protein_coding 55289716,55270165,55234782,55230401,55228609,55223889,55202969 55289815,55270284,55234956,55230486,55228712,55224012,55205705 Gene ID= ENSG00000069974.15 TPM= 43.17 Transcript Type= protein_coding chr15 55318960 55355648 55318960 55355648 + ENST00000164305.9@PIGB ENST00000164305.9 protein_coding 55318960,55320275,55321273,55327531,55329724,55333867,55339267,55340612,55341738,55350699,55354798,55355286 55319413,55320410,55321390,55327635,55329854,55334007,55339318,55340823,55341802,55350912,55354978,55355648 Gene ID= ENSG00000069943.9 TPM= 22.64 Transcript Type= protein_coding chr15 55355239 55408259 55355239 55408259 - ENST00000442196.7@CCPG1 ENST00000442196.7 protein_coding 55408221,55389365,55385600,55378300,55376949,55371793,55365188,55359539,55355239 55408259,55389433,55385714,55378376,55377150,55372044,55365309,55360944,55356409 Gene ID= ENSG00000260916.7 TPM= 6.79 Transcript Type= protein_coding chr15 55655087 55743125 55655087 55743125 - transcript1015.chr15.nic@PRTG transcript1015.chr15.nic protein_coding 55742838,55740382,55683787,55682364,55680491,55680054,55679286,55677797,55675519,55673371,55672445,55655087 55743125,55740684,55683931,55682497,55680628,55680212,55679445,55678044,55675683,55673676,55672633,55656354 Gene ID= ENSG00000166450.12 TPM= 1.81 Transcript Type= NA chr15 55826922 55993746 55826922 55993746 - ENST00000435532.7@NEDD4 ENST00000435532.7 protein_coding 55993511,55966473,55951511,55951376,55924646,55873958,55872415,55869579,55862913,55860661,55860407,55856131,55852424,55850542,55848806,55848521,55848372,55846969,55841934,55840606,55840447,55838509,55838107,55837789,55834227,55834038,55833008,55830514,55826922 55993746,55966546,55951589,55951414,55924699,55874008,55872476,55869681,55863079,55860778,55860574,55856196,55852543,55850742,55848886,55848575,55848430,55847034,55842163,55840727,55840517,55838604,55838180,55837849,55834286,55834145,55833104,55830586,55829999 Gene ID= ENSG00000069869.15 TPM= 9.06 Transcript Type= protein_coding chr15 56365427 56428948 56365427 56428948 + transcript1021.chr15.nic@TEX9 transcript1021.chr15.nic protein_coding 56365427,56365579,56373441,56383952,56388472,56389318,56391243,56394165,56394661,56412302,56427605,56428367 56365477,56365670,56373504,56384031,56388520,56389400,56391418,56394247,56394834,56412436,56427739,56428948 Gene ID= ENSG00000151575.14 TPM= 1.81 Transcript Type= NA chr15 56916726 56918493 56916726 56918493 - ENST00000560587.1@ZNF280D ENST00000560587.1 protein_coding 56917540,56916726 56918493,56917212 Gene ID= ENSG00000137871.19 TPM= 2.72 Transcript Type= processed_transcript chr15 56918625 57289853 56918625 57289853 + ENST00000267811.9@TCF12 ENST00000267811.9 protein_coding 56918625,56919892,56921026,57063750,57091789,57166402,57192158,57197773,57231152,57232291,57232712,57234043,57243472,57251350,57253262,57262094,57263112,57273030,57282445,57286157 56918906,56919988,56921098,57063823,57091891,57166466,57192293,57197825,57231257,57232430,57232856,57234107,57243550,57251423,57253468,57262208,57263274,57273262,57282598,57289853 Gene ID= ENSG00000140262.17 TPM= 34.41 Transcript Type= protein_coding chr15 57376505 57550727 57376505 57550727 + ENST00000281282.5@CGNL1 ENST00000281282.5 protein_coding 57376505,57437985,57440377,57442373,57451500,57452141,57453683,57461680,57516780,57518393,57523489,57524581,57528654,57531690,57543696,57544473,57545592,57546076,57547355 57376567,57439601,57440471,57442478,57451601,57452289,57453818,57461892,57516986,57518497,57523641,57524751,57528815,57531779,57543779,57544597,57545700,57546239,57550727 Gene ID= ENSG00000128849.10 TPM= 21.73 Transcript Type= protein_coding chr15 57591889 57685362 57591889 57685362 + transcript1048.chr15.nic@MYZAP transcript1048.chr15.nic protein_coding 57591889,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57661450,57684402 57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57661533,57685362 Gene ID= ENSG00000263155.5 TPM= 15.23 Transcript Type= NA chr15 57591941 57685364 57591941 57685364 + ENST00000267853.9@MYZAP ENST00000267853.9 protein_coding 57591941,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57661450,57674968,57684402 57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57661533,57675068,57685364 Gene ID= ENSG00000263155.5 TPM= 400.24 Transcript Type= protein_coding chr15 57592033 57685360 57592033 57685360 + ENST00000380565.8@MYZAP ENST00000380565.8 protein_coding 57592033,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57674968,57684402 57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57675068,57685360 Gene ID= ENSG00000263155.5 TPM= 2.48 Transcript Type= protein_coding chr15 57591889 57650062 57591889 57650062 + transcript1052.chr15.nic@GCOM1 transcript1052.chr15.nic protein_coding 57591889,57604269,57618033,57621608,57625779,57629702,57632434,57633613,57637695,57639440,57646137 57592109,57604355,57618188,57621700,57625892,57629854,57632559,57633741,57637774,57639545,57650062 Gene ID= ENSG00000137878.16 TPM= 23.77 Transcript Type= NA chr15 57706711 57717673 57706711 57717673 + transcript1058.chr15.nic@POLR2M transcript1058.chr15.nic protein_coding 57706711,57708714,57711984,57714536 57707141,57709358,57712188,57717673 Gene ID= ENSG00000255529.7 TPM= 4.83 Transcript Type= NA chr15 57706629 57717557 57706629 57717557 + ENST00000299638.7@POLR2M ENST00000299638.7 protein_coding 57706629,57708714,57711984,57714536 57706955,57709358,57712188,57717557 Gene ID= ENSG00000255529.7 TPM= 79.08 Transcript Type= protein_coding chr15 57706725 57717554 57706725 57717554 + ENST00000380557.4@POLR2M ENST00000380557.4 protein_coding 57706725,57709185,57711984,57714536 57706955,57709358,57712188,57717554 Gene ID= ENSG00000255529.7 TPM= 3.02 Transcript Type= protein_coding chr15 57953424 58066418 57953424 58066418 - ENST00000249750.8@ALDH1A2 ENST00000249750.8 protein_coding 58065534,58014177,58013858,58010649,57995078,57992945,57992705,57965725,57963885,57962012,57961137,57960770,57953424 58066418,58014281,58013998,58010778,57995139,57993073,57992818,57965827,57964069,57962176,57961294,57960844,57955269 Gene ID= ENSG00000128918.14 TPM= 20.83 Transcript Type= protein_coding chr15 58138196 58185911 58138196 58185911 + ENST00000219919.8@AQP9 ENST00000219919.8 protein_coding 58138196,58166673,58173068,58174918,58179128,58183961 58138676,58166799,58173205,58175036,58179345,58185911 Gene ID= ENSG00000103569.9 TPM= 1.81 Transcript Type= protein_coding chr15 58588807 58749978 58588807 58749978 - ENST00000260408.7@ADAM10 ENST00000260408.7 protein_coding 58749480,58717577,58682196,58679124,58665097,58646055,58643886,58640777,58633196,58627700,58621471,58611808,58610999,58610297,58599598,58588807 58749978,58717727,58682314,58679282,58665197,58646204,58643978,58640960,58633359,58627883,58621621,58611991,58611107,58610517,58599724,58597641 Gene ID= ENSG00000137845.14 TPM= 36.22 Transcript Type= protein_coding chr15 58879046 58933658 58879046 58933658 - transcript1071.chr15.nic@SLTM transcript1071.chr15.nic protein_coding 58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879046 58933658,58932443,58916999,58913696,58912610,58901287,58899709,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 4.53 Transcript Type= NA chr15 58879426 58933383 58879426 58933383 - transcript1072.chr15.nnic@SLTM transcript1072.chr15.nnic protein_coding 58933050,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879426 58933383,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 1.81 Transcript Type= NA chr15 58879046 58933744 58879046 58933744 - transcript1073.chr15.nic@SLTM transcript1073.chr15.nic protein_coding 58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879046 58933744,58932443,58916999,58913696,58912610,58901287,58899883,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 7.24 Transcript Type= NA chr15 58879046 58933383 58879046 58933383 - transcript1074.chr15.nnic@SLTM transcript1074.chr15.nnic protein_coding 58933050,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879046 58933383,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 3.62 Transcript Type= NA chr15 58879429 58933595 58879429 58933595 - transcript1077.chr15.nic@SLTM transcript1077.chr15.nic protein_coding 58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893902,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879429 58933595,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 1.81 Transcript Type= NA chr15 58879046 58933676 58879046 58933676 - transcript1079.chr15.nic@SLTM transcript1079.chr15.nic protein_coding 58933404,58932356,58916935,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879046 58933676,58932443,58916999,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 3.62 Transcript Type= NA chr15 58879046 58934131 58879046 58934131 - transcript1080.chr15.nic@SLTM transcript1080.chr15.nic protein_coding 58933404,58932356,58916935,58913499,58912563,58901260,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879046 58934131,58932443,58916999,58913696,58912610,58901287,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 6.34 Transcript Type= NA chr15 58879046 58933684 58879046 58933684 - transcript1089.chr15.nic@SLTM transcript1089.chr15.nic protein_coding 58933404,58932356,58916935,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879046 58933684,58932443,58916999,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 3.62 Transcript Type= NA chr15 58879046 58933587 58879046 58933587 - transcript1091.chr15.nic@SLTM transcript1091.chr15.nic protein_coding 58933404,58932356,58916935,58913499,58912563,58901260,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58889430,58888385,58887226,58886975,58883626,58879046 58933587,58932443,58916999,58913696,58912610,58901287,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 1.81 Transcript Type= NA chr15 58879045 58933653 58879045 58933653 - ENST00000380516.6@SLTM ENST00000380516.6 protein_coding 58933404,58932356,58916935,58913499,58912563,58901260,58899469,58898803,58897115,58894433,58894090,58893821,58893279,58892897,58890281,58889430,58888385,58887226,58886975,58883626,58879045 58933653,58932443,58916999,58913696,58912610,58901287,58899937,58898852,58897233,58894582,58894193,58893987,58893364,58893060,58890461,58889554,58888555,58887540,58887119,58883786,58880107 Gene ID= ENSG00000137776.16 TPM= 20.83 Transcript Type= protein_coding chr15 58987655 59097419 58987655 59097419 + ENST00000348370.8@RNF111 ENST00000348370.8 protein_coding 58987655,59030804,59052305,59055682,59058356,59066764,59075954,59080936,59084129,59085659,59089667,59091059,59092537,59094783 58988068,59031702,59052431,59055845,59058550,59067083,59076215,59081284,59084254,59085785,59089759,59091154,59092640,59097419 Gene ID= ENSG00000157450.15 TPM= 4.53 Transcript Type= protein_coding chr15 59105078 59125045 59105078 59125045 + ENST00000288207.6@CCNB2 ENST00000288207.6 protein_coding 59105078,59107322,59107557,59114444,59114718,59116690,59117228,59123517,59124767 59105292,59107450,59107670,59114614,59114876,59116926,59117368,59123627,59125045 Gene ID= ENSG00000157456.7 TPM= 1.81 Transcript Type= protein_coding chr15 59132434 59372900 59132434 59372900 - ENST00000288235.8@MYO1E ENST00000288235.8 protein_coding 59372498,59272306,59261420,59256284,59236585,59231702,59227459,59224689,59223059,59217891,59214640,59214228,59210514,59208681,59205400,59202326,59195461,59188118,59178393,59174126,59173746,59171897,59163157,59161073,59158287,59153590,59138198,59132434 59372900,59272449,59261509,59256378,59236672,59231791,59227590,59224823,59223191,59218087,59214720,59214314,59210600,59208848,59205485,59202407,59195567,59188216,59178537,59174240,59173915,59172042,59163303,59161230,59158379,59153791,59138367,59137456 Gene ID= ENSG00000157483.8 TPM= 8.15 Transcript Type= protein_coding chr15 59638062 59657538 59638062 59657538 - ENST00000396060.6@GTF2A2 ENST00000396060.6 protein_coding 59657406,59652206,59650669,59642136,59638062 59657538,59652326,59650773,59642262,59639157 Gene ID= ENSG00000140307.10 TPM= 57.95 Transcript Type= protein_coding chr15 59659146 59689392 59659146 59689392 - transcript1105.chr15.nic@BNIP2 transcript1105.chr15.nic protein_coding 59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59668103,59659146 59689392,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59668138,59664120 Gene ID= ENSG00000140299.11 TPM= 11.77 Transcript Type= NA chr15 59659146 59689534 59659146 59689534 - ENST00000267859.7@BNIP2 ENST00000267859.7 protein_coding 59689135,59682408,59680241,59679592,59677911,59672637,59671183,59669276,59668892,59659146 59689534,59682514,59680308,59679768,59678087,59672739,59671314,59669362,59668990,59664120 Gene ID= ENSG00000140299.11 TPM= 28.98 Transcript Type= protein_coding chr15 60347134 60397986 60347134 60397986 - ENST00000396024.7@ANXA2 ENST00000396024.7 protein_coding 60397943,60390213,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347134 60397986,60390317,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689 Gene ID= ENSG00000182718.16 TPM= 14.37 Transcript Type= protein_coding chr15 60347327 60398043 60347327 60398043 - ENST00000451270.6@ANXA2 ENST00000451270.6 protein_coding 60397943,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347327 60398043,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689 Gene ID= ENSG00000182718.16 TPM= 732.02 Transcript Type= protein_coding chr15 60347342 60397986 60347342 60397986 - ENST00000421017.6@ANXA2 ENST00000421017.6 protein_coding 60397943,60397258,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347342 60397986,60397338,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689 Gene ID= ENSG00000182718.16 TPM= 47.95 Transcript Type= protein_coding chr15 60347332 60397985 60347332 60397985 - ENST00000332680.8@ANXA2 ENST00000332680.8 protein_coding 60397871,60386028,60382342,60364429,60360941,60357146,60355919,60354154,60352383,60351724,60351193,60349075,60347332 60397985,60386086,60382441,60364523,60361054,60357236,60355998,60354213,60352476,60351819,60351251,60349197,60347689 Gene ID= ENSG00000182718.16 TPM= 8.48 Transcript Type= protein_coding chr15 60419613 60479160 60419613 60479160 - ENST00000558181.5@ICE2 ENST00000558181.5 protein_coding 60479003,60477937,60476063,60468061,60466594,60456657,60455326,60455003,60453603,60448848,60447970,60442416,60436143,60431934,60428429,60419613 60479160,60478069,60476167,60468162,60466713,60456794,60455442,60455162,60453784,60449841,60448145,60442545,60436227,60431984,60428687,60423762 Gene ID= ENSG00000128915.11 TPM= 17.21 Transcript Type= nonsense_mediated_decay chr15 60488284 61229319 60488284 61229319 - ENST00000335670.10@RORA ENST00000335670.10 protein_coding 61229053,60678657,60531766,60514616,60511226,60505508,60503535,60502760,60500959,60499892,60488284 61229319,60678686,60531851,60514757,60511621,60505629,60503667,60502867,60501069,60500004,60497619 Gene ID= ENSG00000069667.15 TPM= 15.39 Transcript Type= protein_coding chr15 60497285 60592541 60497285 60592541 - ENST00000449337.6@RORA ENST00000449337.6 protein_coding 60592387,60531766,60514616,60511226,60505508,60503535,60502760,60500959,60499892,60497285 60592541,60531851,60514757,60511621,60505629,60503667,60502867,60501069,60500004,60497619 Gene ID= ENSG00000069667.15 TPM= 5.43 Transcript Type= protein_coding chr15 62758590 62841488 62758590 62841488 + transcript1144.chr15.nic@TLN2 transcript1144.chr15.nic protein_coding 62758590,62761681,62762272,62763563,62766321,62770964,62776764,62781140,62783771,62792641,62796127,62797219,62800368,62800653,62805600,62809925,62819516,62820486,62833504,62835737,62835891,62838856,62840482 62758659,62761821,62762453,62763695,62766422,62771134,62776910,62781241,62783890,62792787,62796293,62797402,62800493,62800769,62805785,62810032,62819621,62820610,62833629,62835799,62836073,62838981,62841488 Gene ID= ENSG00000171914.16 TPM= 4.53 Transcript Type= NA chr15 63048442 63071914 63048442 63071914 + transcript1161.chr15.nic@TPM1 transcript1161.chr15.nic protein_coding 63048442,63056985,63059563,63060869,63061713,63062215,63062576,63071090 63048707,63057118,63059680,63060939,63061788,63062277,63062645,63071914 Gene ID= ENSG00000140416.19 TPM= 7.53 Transcript Type= NA chr15 63042685 63071889 63042685 63071889 + ENST00000358278.7@TPM1 ENST00000358278.7 protein_coding 63042685,63044027,63056985,63059563,63060869,63061198,63062215,63062576,63071090 63042943,63044152,63057118,63059680,63060939,63061273,63062277,63062645,63071889 Gene ID= ENSG00000140416.19 TPM= 16.43 Transcript Type= protein_coding chr15 63042758 63071915 63042758 63071915 + ENST00000267996.11@TPM1 ENST00000267996.11 protein_coding 63042758,63043706,63056985,63059563,63060869,63061713,63062215,63062576,63071090 63042943,63043831,63057118,63059680,63060939,63061788,63062277,63062645,63071915 Gene ID= ENSG00000140416.19 TPM= 37.25 Transcript Type= protein_coding chr15 63042758 63071900 63042758 63071900 + ENST00000559397.5@TPM1 ENST00000559397.5 protein_coding 63042758,63043706,63056985,63059563,63060869,63061198,63062215,63062576,63071090 63042943,63043831,63057118,63059680,63060939,63061273,63062277,63062645,63071900 Gene ID= ENSG00000140416.19 TPM= 15.52 Transcript Type= protein_coding chr15 63048467 63071884 63048467 63071884 + ENST00000404484.8@TPM1 ENST00000404484.8 protein_coding 63048467,63056985,63059563,63060869,63061198,63062215,63062576,63071090 63048707,63057118,63059680,63060939,63061273,63062277,63062645,63071884 Gene ID= ENSG00000140416.19 TPM= 68.95 Transcript Type= protein_coding chr15 63121799 63142100 63121799 63142100 + transcript1170.chr15.nnic@LACTB transcript1170.chr15.nnic protein_coding 63121799,63122085,63122636,63126859,63127353,63129485,63141280 63121976,63122228,63122702,63127049,63127689,63129650,63142100 Gene ID= ENSG00000103642.11 TPM= 10.87 Transcript Type= NA chr15 63121833 63131471 63121833 63131471 + ENST00000413507.3@LACTB ENST00000413507.3 protein_coding 63121833,63122636,63126859,63127353,63129485 63122228,63122702,63127049,63127689,63131471 Gene ID= ENSG00000103642.11 TPM= 14.49 Transcript Type= protein_coding chr15 63121800 63142061 63121800 63142061 + ENST00000261893.8@LACTB ENST00000261893.8 protein_coding 63121800,63122636,63126859,63127353,63129485,63141280 63122228,63122702,63127049,63127689,63129650,63142061 Gene ID= ENSG00000103642.11 TPM= 69.73 Transcript Type= protein_coding chr15 63148250 63157802 63148250 63157802 - ENST00000330964.9@RPS27L ENST00000330964.9 protein_coding 63157400,63156413,63155621,63148250 63157802,63156521,63155731,63154060 Gene ID= ENSG00000185088.13 TPM= 260.8 Transcript Type= protein_coding chr15 63153853 63157477 63153853 63157477 - ENST00000482846.1@RPS27L ENST00000482846.1 protein_coding 63156413,63153853 63157477,63155731 Gene ID= ENSG00000185088.13 TPM= 3.62 Transcript Type= retained_intron chr15 63189469 63267782 63189469 63267782 + ENST00000321437.8@RAB8B ENST00000321437.8 protein_coding 63189469,63244756,63249645,63255507,63256505,63259627,63262692,63263527 63189748,63244816,63249705,63255584,63256594,63259692,63262742,63267782 Gene ID= ENSG00000166128.12 TPM= 28.07 Transcript Type= protein_coding chr15 63277554 63309126 63277554 63309126 + ENST00000261879.9@APH1B ENST00000261879.9 protein_coding 63277554,63279161,63286558,63287424,63302345,63305614 63277736,63279331,63286628,63287546,63302472,63309126 Gene ID= ENSG00000138613.13 TPM= 24.45 Transcript Type= protein_coding chr15 63504592 63594638 63504592 63594638 + transcript1188.chr15.nic@USP3 transcript1188.chr15.nic protein_coding 63504592,63529014,63532647,63533803,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661 63504830,63529166,63532707,63533918,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63594638 Gene ID= ENSG00000140455.16 TPM= 3.62 Transcript Type= NA chr15 63504611 63591467 63504611 63591467 + ENST00000380324.7@USP3 ENST00000380324.7 protein_coding 63504611,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661 63504830,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591467 Gene ID= ENSG00000140455.16 TPM= 19.92 Transcript Type= protein_coding chr15 63504635 63591444 63504635 63591444 + ENST00000558157.5@USP3 ENST00000558157.5 protein_coding 63504635,63529014,63532647,63537025,63553715,63556667,63558106,63559857,63562895,63570433,63574046,63574323,63588305,63588702,63588944,63590661 63504830,63529166,63532707,63537156,63553798,63556748,63558188,63559970,63563008,63570579,63574152,63574403,63588423,63588815,63589011,63591444 Gene ID= ENSG00000140455.16 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr15 63608618 63833888 63608618 63833888 - ENST00000443617.6@HERC1 ENST00000443617.6 protein_coding 63833827,63774694,63764096,63758175,63756437,63755229,63754505,63752958,63749647,63749367,63747724,63746918,63734724,63732924,63729497,63729236,63727647,63725292,63723182,63718783,63718574,63716302,63713353,63712775,63706780,63698728,63696124,63694774,63694312,63693964,63692411,63690541,63689589,63686359,63680537,63680077,63677845,63674342,63672496,63669538,63666356,63665919,63664470,63662984,63661753,63660973,63659736,63658544,63656088,63655742,63654119,63652414,63651253,63649725,63648069,63645483,63644992,63643404,63642957,63641470,63640152,63638711,63638411,63637505,63635961,63634733,63633848,63632709,63630466,63628677,63625985,63624158,63623725,63622815,63616430,63615768,63612251,63608618 63833888,63775649,63764191,63758369,63756748,63755325,63754648,63753085,63749791,63749538,63747858,63747083,63734849,63733145,63729649,63729368,63727838,63725513,63723355,63718897,63718694,63716473,63713665,63712895,63706831,63698996,63696339,63694894,63694549,63694157,63692566,63690647,63689699,63686535,63680776,63680160,63678365,63675117,63672694,63669698,63666472,63666150,63664594,63663204,63662021,63661025,63659936,63658718,63656358,63655955,63654324,63652541,63651380,63649925,63648199,63645682,63645097,63643550,63643058,63641643,63640445,63638776,63638536,63637643,63636142,63634888,63633970,63632811,63630635,63628815,63626154,63624327,63623890,63622891,63616682,63615920,63612556,63609266 Gene ID= ENSG00000103657.13 TPM= 8.15 Transcript Type= protein_coding chr15 64072559 64094018 64072559 64094018 - ENST00000300030.7@FAM96A ENST00000300030.7 protein_coding 64093645,64088687,64081102,64075492,64072559 64094018,64088851,64081151,64075537,64073028 Gene ID= ENSG00000166797.10 TPM= 83.31 Transcript Type= protein_coding chr15 64072578 64093808 64072578 64093808 - ENST00000380290.7@FAM96A ENST00000380290.7 protein_coding 64093645,64088687,64075492,64072578 64093808,64088851,64075537,64073028 Gene ID= ENSG00000166797.10 TPM= 9.96 Transcript Type= protein_coding chr15 64096000 64138006 64096000 64138006 + ENST00000559844.5@SNX1 ENST00000559844.5 protein_coding 64096000,64112573,64118117,64118788,64123503,64126079,64127174,64127731,64129916,64130228,64131687,64134664,64136330,64136861,64137568 64096172,64112684,64118244,64118854,64123546,64126220,64127252,64127806,64130029,64130321,64131892,64134807,64136410,64136932,64138006 Gene ID= ENSG00000028528.14 TPM= 272.8 Transcript Type= protein_coding chr15 64155812 64163205 64155812 64163205 - ENST00000300026.3@PPIB ENST00000300026.3 protein_coding 64162852,64162041,64160104,64156725,64155812 64163205,64162154,64160197,64156909,64156145 Gene ID= ENSG00000166794.4 TPM= 441.91 Transcript Type= protein_coding chr15 64387836 64455301 64387836 64455301 + transcript1229.chr15.nnic@TRIP4 transcript1229.chr15.nnic protein_coding 64387836,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997 64388048,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455301 Gene ID= ENSG00000103671.9 TPM= 4.53 Transcript Type= NA chr15 64387843 64455301 64387843 64455301 + transcript1230.chr15.nic@TRIP4 transcript1230.chr15.nic protein_coding 64387843,64394007,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997 64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455301 Gene ID= ENSG00000103671.9 TPM= 1.81 Transcript Type= NA chr15 64387804 64455303 64387804 64455303 + ENST00000261884.7@TRIP4 ENST00000261884.7 protein_coding 64387804,64393946,64395398,64397606,64400743,64406330,64409613,64414085,64418541,64424031,64425540,64445006,64454997 64387964,64394115,64395531,64397818,64400821,64406459,64409828,64414211,64418728,64424155,64425631,64445108,64455303 Gene ID= ENSG00000103671.9 TPM= 28.98 Transcript Type= protein_coding chr15 64460578 64675032 64460578 64675032 + transcript1234.chr15.nic@ZNF609 transcript1234.chr15.nic protein_coding 64460578,64499293,64622827,64670346,64673916 64460838,64500166,64623052,64670433,64675032 Gene ID= ENSG00000180357.9 TPM= 2.72 Transcript Type= NA chr15 64499292 64686068 64499292 64686068 + ENST00000326648.4@ZNF609 ENST00000326648.4 protein_coding 64499292,64622827,64670346,64673916,64678116,64680185,64680646,64681309,64681692 64500166,64623052,64670433,64676256,64678482,64680360,64680862,64681387,64686068 Gene ID= ENSG00000180357.9 TPM= 3.62 Transcript Type= protein_coding chr15 64687573 64703281 64687573 64703281 - ENST00000326005.10@OAZ2 ENST00000326005.10 protein_coding 64703029,64691516,64691434,64690374,64689084,64687573 64703281,64691591,64691514,64690549,64689169,64688834 Gene ID= ENSG00000180304.14 TPM= 310 Transcript Type= protein_coding chr15 64687604 64703208 64687604 64703208 - ENST00000560258.6@OAZ2 ENST00000560258.6 protein_coding 64703029,64691516,64691434,64690374,64687604 64703208,64691591,64691514,64690549,64688834 Gene ID= ENSG00000180304.14 TPM= 2.11 Transcript Type= protein_coding chr15 64739898 64775587 64739898 64775587 - ENST00000300069.4@RBPMS2 ENST00000300069.4 protein_coding 64775233,64751561,64750343,64749431,64749000,64748419,64741173,64739898 64775587,64751638,64750381,64749493,64749150,64748567,64741242,64741000 Gene ID= ENSG00000166831.8 TPM= 3.62 Transcript Type= protein_coding chr15 64841883 64868000 64841883 64868000 + ENST00000616065.4@PLEKHO2 ENST00000616065.4 protein_coding 64841883,64854921,64859894,64861477,64864899 64842028,64855037,64859998,64861575,64868000 Gene ID= ENSG00000241839.9 TPM= 11.77 Transcript Type= protein_coding chr15 64841889 64868007 64841889 64868007 + ENST00000323544.4@PLEKHO2 ENST00000323544.4 protein_coding 64841889,64848593,64854921,64859894,64861477,64864899 64842028,64848742,64855037,64859998,64861575,64868007 Gene ID= ENSG00000241839.9 TPM= 105.95 Transcript Type= protein_coding chr15 64911873 64958690 64911873 64958690 + transcript1248.chr15.nic@ANKDD1A transcript1248.chr15.nic protein_coding 64911873,64915797,64917386,64921921,64926066,64926901,64930822,64931487,64934136,64942467,64943484,64944652,64947404,64949841,64950954,64957103 64911964,64915900,64917484,64922019,64926170,64926999,64930920,64931585,64934234,64942565,64943582,64944747,64947593,64949972,64951233,64958690 Gene ID= ENSG00000166839.16 TPM= 2.94 Transcript Type= NA chr15 64911873 64958690 64911873 64958690 + transcript1259.chr15.nic@ANKDD1A transcript1259.chr15.nic protein_coding 64911873,64921921,64926066,64926901,64930822,64931487,64934136,64942467,64943484,64944652,64947404,64949841,64950954,64957103 64911964,64922019,64926170,64926999,64930920,64931585,64934234,64942565,64943582,64944747,64947593,64949972,64951233,64958690 Gene ID= ENSG00000166839.16 TPM= 2.94 Transcript Type= NA chr15 64911902 64958700 64911902 64958700 + ENST00000319580.12@ANKDD1A ENST00000319580.12 protein_coding 64911902,64915797,64917386,64921921,64926066,64926901,64930822,64931487,64934136,64942467,64943484,64944652,64947404,64949841,64957103 64911964,64915900,64917514,64922019,64926170,64926999,64930920,64931585,64934234,64942565,64943582,64944747,64947593,64949972,64958700 Gene ID= ENSG00000166839.16 TPM= 1.13 Transcript Type= protein_coding chr15 64963021 64989928 64963021 64989928 - transcript1283.chr15.nic@SPG21 transcript1283.chr15.nic protein_coding 64989665,64980864,64976475,64974602,64970114,64969255,64965320,64963021 64989928,64981025,64976555,64974747,64970222,64969362,64965460,64963736 Gene ID= ENSG00000090487.10 TPM= 11.77 Transcript Type= NA chr15 64963021 64989936 64963021 64989936 - ENST00000204566.6@SPG21 ENST00000204566.6 protein_coding 64989665,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963021 64989936,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736 Gene ID= ENSG00000090487.10 TPM= 129.95 Transcript Type= protein_coding chr15 64963027 64989474 64963027 64989474 - ENST00000433215.6@SPG21 ENST00000433215.6 protein_coding 64989406,64983507,64980864,64976475,64974602,64970114,64969255,64965320,64963027 64989474,64983593,64981025,64976555,64974747,64970222,64969362,64965460,64963736 Gene ID= ENSG00000090487.10 TPM= 2.26 Transcript Type= protein_coding chr15 65002513 65029646 65002513 65029646 - transcript1287.chr15.nnic@MTFMT transcript1287.chr15.nnic protein_coding 65029405,65026831,65023672,65021514,65020197,65016436,65006113,65004854,65002985,65002513 65029646,65027040,65023794,65021616,65020272,65016527,65006191,65004936,65003256,65002667 Gene ID= ENSG00000103707.9 TPM= 3.62 Transcript Type= NA chr15 65093006 65133852 65093006 65133852 - transcript1296.chr15.nnic@UBAP1L transcript1296.chr15.nnic protein_coding 65132912,65129032,65119718,65119376,65118672,65106096,65102106,65099505,65094475,65093006 65133852,65129170,65119954,65119463,65118840,65106359,65102684,65099714,65094576,65093231 Gene ID= ENSG00000246922.8 TPM= 1.81 Transcript Type= NA chr15 65117378 65133852 65117378 65133852 - transcript1299.chr15.nic@PDCD7 transcript1299.chr15.nic protein_coding 65132912,65129032,65119376,65117378 65133852,65129170,65119463,65118840 Gene ID= ENSG00000090470.14 TPM= 3.62 Transcript Type= NA chr15 65117379 65133836 65117379 65133836 - ENST00000204549.8@PDCD7 ENST00000204549.8 protein_coding 65132912,65129032,65119718,65119376,65117379 65133836,65129170,65119954,65119463,65118840 Gene ID= ENSG00000090470.14 TPM= 28.07 Transcript Type= protein_coding chr15 65148219 65185342 65148219 65185342 - ENST00000300107.7@CLPX ENST00000300107.7 protein_coding 65185075,65180044,65178934,65166631,65164029,65162604,65158575,65157746,65156844,65155692,65154782,65153547,65152430,65148219 65185342,65180204,65179051,65166785,65164188,65162645,65158751,65157910,65156932,65155856,65155081,65153639,65152536,65150913 Gene ID= ENSG00000166855.9 TPM= 52.52 Transcript Type= protein_coding chr15 65194758 65211488 65194758 65211488 - ENST00000261883.5@CILP ENST00000261883.5 protein_coding 65211428,65209695,65207672,65206782,65205287,65204268,65203362,65201872,65194758 65211488,65209861,65207764,65207051,65205466,65204582,65203470,65202029,65199099 Gene ID= ENSG00000138615.5 TPM= 4.53 Transcript Type= protein_coding chr15 65234464 65286914 65234464 65286914 - transcript1309.chr15.nic@PARP16 transcript1309.chr15.nic protein_coding 65286253,65270935,65266562,65263149,65260885,65259464,65248117,65234464 65286914,65271072,65266768,65263320,65261026,65259542,65248228,65234823 Gene ID= ENSG00000138617.14 TPM= 2.72 Transcript Type= NA chr15 65258096 65286914 65258096 65286914 - transcript1312.chr15.nnic@PARP16 transcript1312.chr15.nnic protein_coding 65286253,65270992,65266562,65263149,65260885,65258096 65286914,65271072,65266768,65263320,65261026,65259542 Gene ID= ENSG00000138617.14 TPM= 4.53 Transcript Type= NA chr15 65258094 65286872 65258094 65286872 - ENST00000261888.10@PARP16 ENST00000261888.10 protein_coding 65286253,65270935,65266562,65263149,65260885,65258094 65286872,65271072,65266768,65263320,65261026,65259545 Gene ID= ENSG00000138617.14 TPM= 31.69 Transcript Type= protein_coding chr15 65258096 65286843 65258096 65286843 - ENST00000444347.2@PARP16 ENST00000444347.2 protein_coding 65286253,65263149,65260885,65258096 65286843,65263320,65261026,65259542 Gene ID= ENSG00000138617.14 TPM= 2.72 Transcript Type= protein_coding chr15 65381464 65423072 65381464 65423072 - ENST00000352385.2@IGDCC4 ENST00000352385.2 protein_coding 65422793,65411020,65410178,65402351,65400806,65396834,65395750,65395094,65394411,65393361,65392134,65391880,65390155,65389284,65388808,65388449,65386551,65385831,65384954,65381464 65423072,65411370,65410319,65402487,65400946,65396989,65396163,65395258,65394548,65393531,65392370,65391981,65390338,65389411,65388978,65388586,65386656,65386059,65385115,65384419 Gene ID= ENSG00000103742.11 TPM= 9.96 Transcript Type= protein_coding chr15 65445026 65517633 65445026 65517633 - transcript1323.chr15.nic@DPP8 transcript1323.chr15.nic protein_coding 65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65451960,65450999,65445026 65517633,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65452102,65451110,65447006 Gene ID= ENSG00000074603.18 TPM= 3.62 Transcript Type= NA chr15 65446638 65517710 65446638 65517710 - transcript1324.chr15.nnic@DPP8 transcript1324.chr15.nnic protein_coding 65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65446638 65517710,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65447006 Gene ID= ENSG00000074603.18 TPM= 2.72 Transcript Type= NA chr15 65446619 65517699 65446619 65517699 - ENST00000300141.10@DPP8 ENST00000300141.10 protein_coding 65517486,65512295,65507243,65500606,65497864,65490189,65487690,65485099,65481515,65480222,65478880,65474209,65467071,65466678,65463761,65456225,65454263,65451960,65450999,65446619 65517699,65512564,65507355,65500779,65498032,65490299,65487818,65485160,65481615,65480399,65479039,65474288,65467223,65466813,65463906,65456371,65454415,65452102,65451110,65447006 Gene ID= ENSG00000074603.18 TPM= 24.45 Transcript Type= protein_coding chr15 65530466 65578352 65530466 65578352 + ENST00000261875.9@HACD3 ENST00000261875.9 protein_coding 65530466,65551676,65554887,65556739,65558680,65562774,65564215,65570091,65571548,65572235,65576303 65530718,65551718,65554960,65556903,65558731,65562884,65564342,65570203,65571654,65572366,65578352 Gene ID= ENSG00000074696.12 TPM= 392.1 Transcript Type= protein_coding chr15 65578760 65611130 65578760 65611130 - transcript1338.chr15.nnic@INTS14 transcript1338.chr15.nnic protein_coding 65611098,65607159,65605129,65599774,65598872,65598321,65597448,65595733,65593428,65591598,65584770,65581954,65578760 65611130,65607442,65605236,65599929,65598990,65598463,65597594,65595825,65593572,65591731,65584888,65582019,65579659 Gene ID= ENSG00000138614.14 TPM= 1.99 Transcript Type= NA chr15 65578753 65611136 65578753 65611136 - ENST00000573314.5@INTS14 ENST00000573314.5 protein_coding 65610796,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578753 65611136,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659 Gene ID= ENSG00000138614.14 TPM= 15.12 Transcript Type= nonsense_mediated_decay chr15 65578760 65611251 65578760 65611251 - transcript1343.chr15.nic@INTS14 transcript1343.chr15.nic protein_coding 65611098,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578760 65611251,65607425,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659 Gene ID= ENSG00000138614.14 TPM= 4.41 Transcript Type= NA chr15 65578760 65611121 65578760 65611121 - transcript1344.chr15.nic@INTS14 transcript1344.chr15.nic protein_coding 65610686,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578760 65611121,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659 Gene ID= ENSG00000138614.14 TPM= 5.16 Transcript Type= NA chr15 65578782 65611245 65578782 65611245 - ENST00000313182.6@INTS14 ENST00000313182.6 protein_coding 65611098,65607159,65605129,65599774,65598872,65598321,65595733,65593428,65591598,65584770,65581954,65578782 65611245,65607442,65605236,65599929,65598990,65598463,65595825,65593572,65591731,65584888,65582019,65579659 Gene ID= ENSG00000138614.14 TPM= 36.7 Transcript Type= protein_coding chr15 65623953 65655868 65623953 65655868 + transcript1353.chr15.nic@SLC24A1 transcript1353.chr15.nic protein_coding 65623953,65638128,65639595,65644427,65645612,65650382,65651670,65652642,65654730 65625970,65638181,65639703,65644513,65645703,65650942,65651759,65652808,65655868 Gene ID= ENSG00000074621.13 TPM= 1.81 Transcript Type= NA chr15 65659123 65792124 65659123 65792124 - ENST00000443035.7@DENND4A ENST00000443035.7 protein_coding 65792010,65761360,65756140,65752379,65741715,65738706,65737707,65732752,65731642,65729534,65729072,65722848,65717778,65715478,65706091,65702873,65702305,65701762,65701051,65700544,65697267,65696366,65690415,65676445,65671792,65670013,65669779,65667925,65667449,65665345,65664560,65664330,65659123 65792124,65761438,65756472,65752628,65741784,65738875,65737945,65732818,65731700,65729678,65729247,65722948,65717996,65715623,65706224,65703008,65702511,65701890,65701192,65700672,65697383,65696497,65691511,65676634,65671886,65670188,65669925,65668123,65667703,65665462,65664722,65664394,65661987 Gene ID= ENSG00000174485.15 TPM= 3.62 Transcript Type= protein_coding chr15 65869458 65891991 65869458 65891991 + ENST00000261890.6@RAB11A ENST00000261890.6 protein_coding 65869458,65877332,65877762,65879671,65887701 65869625,65877527,65877955,65879751,65891991 Gene ID= ENSG00000103769.9 TPM= 336.86 Transcript Type= protein_coding chr15 66293791 66333908 66293791 66333908 + transcript1369.chr15.nic@DIS3L transcript1369.chr15.nic protein_coding 66293791,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004 66294174,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333908 Gene ID= ENSG00000166938.12 TPM= 24.63 Transcript Type= NA chr15 66293804 66333908 66293804 66333908 + transcript1370.chr15.nic@DIS3L transcript1370.chr15.nic protein_coding 66293804,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004 66294448,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333908 Gene ID= ENSG00000166938.12 TPM= 3.8 Transcript Type= NA chr15 66293487 66333908 66293487 66333908 + transcript1374.chr15.nnic@DIS3L transcript1374.chr15.nnic protein_coding 66293487,66294988,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004 66293735,66295141,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333908 Gene ID= ENSG00000166938.12 TPM= 3.62 Transcript Type= NA chr15 66293217 66333898 66293217 66333898 + ENST00000319194.9@DIS3L ENST00000319194.9 protein_coding 66293217,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004 66293367,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333898 Gene ID= ENSG00000166938.12 TPM= 12.86 Transcript Type= protein_coding chr15 66293547 66333744 66293547 66333744 + ENST00000319212.8@DIS3L ENST00000319212.8 protein_coding 66293547,66294988,66306824,66308709,66311724,66314039,66315036,66318449,66320571,66322687,66323493,66325831,66328970,66329221,66331875,66332736,66333004 66293735,66295141,66306952,66308844,66311900,66314117,66315215,66318618,66320732,66322934,66323585,66326364,66329124,66329399,66332020,66332910,66333744 Gene ID= ENSG00000166938.12 TPM= 11.95 Transcript Type= protein_coding chr15 66336206 66356716 66336206 66356716 - ENST00000261881.8@TIPIN ENST00000261881.8 protein_coding 66356639,66352815,66352129,66351525,66349315,66349060,66341150,66336206 66356716,66352955,66352207,66351600,66349437,66349123,66341356,66337181 Gene ID= ENSG00000075131.9 TPM= 1.81 Transcript Type= protein_coding chr15 66386817 66492312 66386817 66492312 + ENST00000307102.9@MAP2K1 ENST00000307102.9 protein_coding 66386817,66435027,66436746,66443280,66444656,66481755,66484990,66487228,66489215,66489718,66490502 66387427,66435237,66436892,66443357,66444707,66481879,66485191,66487292,66489276,66489763,66492312 Gene ID= ENSG00000169032.9 TPM= 121.95 Transcript Type= protein_coding chr15 66386912 66491543 66386912 66491543 + transcript1383.chr15.nnic@MAP2K1 transcript1383.chr15.nnic protein_coding 66386912,66435027,66436746,66444656,66481755,66484990,66487228,66489215,66489718,66490502 66387427,66435237,66436892,66444707,66481879,66485191,66487292,66489276,66489763,66491543 Gene ID= ENSG00000169032.9 TPM= 5.13 Transcript Type= NA chr15 66386895 66491543 66386895 66491543 + transcript1384.chr15.nnic@MAP2K1 transcript1384.chr15.nnic protein_coding 66386895,66435027,66436746,66443280,66444656,66487228,66489215,66489718,66490502 66387427,66435237,66436892,66443357,66444707,66487292,66489276,66489763,66491543 Gene ID= ENSG00000169032.9 TPM= 4.23 Transcript Type= NA chr15 66493813 66497813 66493813 66497813 - ENST00000316634.5@SNAPC5 ENST00000316634.5 protein_coding 66497642,66495330,66493813 66497813,66495419,66494552 Gene ID= ENSG00000174446.12 TPM= 11.77 Transcript Type= protein_coding chr15 66498015 66504883 66498015 66504883 - ENST00000307961.10@RPL4 ENST00000307961.10 protein_coding 66504788,66503358,66503058,66502612,66501788,66501375,66500949,66500293,66500056,66498015 66504883,66503529,66503164,66502750,66501912,66501504,66501105,66500376,66500176,66499652 Gene ID= ENSG00000174444.14 TPM= 810.01 Transcript Type= protein_coding chr15 66499320 66504846 66499320 66504846 - ENST00000567229.5@RPL4 ENST00000567229.5 protein_coding 66504788,66503358,66502612,66501788,66500949,66500293,66500056,66499320 66504846,66503529,66503164,66501912,66501504,66500376,66500176,66499652 Gene ID= ENSG00000174444.14 TPM= 14.94 Transcript Type= retained_intron chr15 66504959 66550128 66504959 66550128 + ENST00000307897.9@ZWILCH ENST00000307897.9 protein_coding 66504959,66508841,66513988,66515526,66518879,66520590,66521050,66523677,66527290,66527857,66528852,66529494,66532247,66532985,66535933,66537168,66540098,66546591,66548351 66505391,66508892,66514083,66515644,66519078,66520660,66521205,66523748,66527383,66527912,66528957,66529573,66532403,66533013,66536069,66537263,66540210,66546705,66550128 Gene ID= ENSG00000174442.11 TPM= 8.15 Transcript Type= protein_coding chr15 66702237 66781987 66702237 66781987 + transcript1404.chr15.nnic@SMAD6 transcript1404.chr15.nnic protein_coding 66702237,66710395,66711668,66716421,66780997 66704075,66710473,66711724,66716498,66781987 Gene ID= ENSG00000137834.14 TPM= 2.26 Transcript Type= NA chr15 66702195 66781987 66702195 66781987 + transcript1407.chr15.nnic@SMAD6 transcript1407.chr15.nnic protein_coding 66702195,66711668,66716421,66780997 66704303,66711724,66716498,66781987 Gene ID= ENSG00000137834.14 TPM= 3.17 Transcript Type= NA chr15 67065845 67195195 67065845 67195195 + ENST00000327367.8@SMAD3 ENST00000327367.8 protein_coding 67065845,67164895,67165253,67166779,67170554,67181241,67184727,67187365,67190413 67066360,67165088,67165384,67166853,67170604,67181453,67184864,67187509,67195195 Gene ID= ENSG00000166949.15 TPM= 7.24 Transcript Type= protein_coding chr15 67201031 67254636 67201031 67254636 - transcript1416.chr15.nnic@AAGAB transcript1416.chr15.nnic protein_coding 67254224,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201031 67254636,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898 Gene ID= ENSG00000103591.12 TPM= 4.53 Transcript Type= NA chr15 67201707 67254675 67201707 67254675 - ENST00000561452.5@AAGAB ENST00000561452.5 protein_coding 67254414,67236630,67236408,67235979,67231814,67209462,67208562,67204044,67203548,67201707 67254675,67236820,67236504,67236068,67231897,67209544,67208658,67204148,67203597,67202898 Gene ID= ENSG00000103591.12 TPM= 3.62 Transcript Type= protein_coding chr15 67514924 67521662 67514924 67521662 - transcript1428.chr15.nnic@IQCH-AS1 transcript1428.chr15.nnic lincRNA 67521519,67519000,67514924 67521662,67519102,67515066 Gene ID= ENSG00000259673.5 TPM= 2.72 Transcript Type= NA chr15 67521068 67530143 67521068 67530143 + ENST00000342683.5@C15orf61 ENST00000342683.5 protein_coding 67521068,67526418 67521594,67530143 Gene ID= ENSG00000189227.5 TPM= 33.51 Transcript Type= protein_coding chr15 67542709 67807123 67542709 67807123 + ENST00000178640.9@MAP2K5 ENST00000178640.9 protein_coding 67542709,67550034,67563283,67580754,67585890,67586846,67592926,67600685,67630888,67646231,67646388,67658553,67664597,67692479,67693518,67703337,67727916,67748231,67748569,67769602,67772707,67806646 67543470,67550082,67563350,67580823,67585930,67586913,67592974,67600749,67630927,67646299,67646469,67658614,67664645,67692552,67693568,67703408,67727945,67748257,67748601,67769663,67772752,67807123 Gene ID= ENSG00000137764.19 TPM= 37.13 Transcript Type= protein_coding chr15 68054179 68193846 68054179 68193846 + ENST00000249636.10@PIAS1 ENST00000249636.10 protein_coding 68054179,68086306,68141946,68142290,68145816,68146566,68153590,68164731,68173732,68175637,68176474,68181212,68183630,68187542 68054350,68086750,68142030,68142337,68145906,68146700,68153695,68164804,68173892,68175767,68176654,68181354,68183667,68193846 Gene ID= ENSG00000033800.13 TPM= 30.79 Transcript Type= protein_coding chr15 68190706 68206110 68190706 68206110 - ENST00000540479.5@CALML4 ENST00000540479.5 protein_coding 68205245,68199541,68197440,68190706 68206110,68199681,68197628,68194112 Gene ID= ENSG00000129007.14 TPM= 2.72 Transcript Type= protein_coding chr15 68206992 68229743 68206992 68229743 - ENST00000249806.10@CLN6 ENST00000249806.10 protein_coding 68229502,68218536,68214290,68211675,68211263,68209637,68206992 68229743,68218650,68214388,68211863,68211318,68209759,68208410 Gene ID= ENSG00000128973.12 TPM= 19.92 Transcript Type= protein_coding chr15 68277803 68295865 68277803 68295865 + ENST00000306917.4@FEM1B ENST00000306917.4 protein_coding 68277803,68289607 68278665,68295865 Gene ID= ENSG00000169018.5 TPM= 13.58 Transcript Type= protein_coding chr15 68778532 68820903 68778532 68820903 - transcript1466.chr15.nnic@ANP32A transcript1466.chr15.nnic protein_coding 68820698,68787770,68778532 68820903,68787919,68779994 Gene ID= ENSG00000140350.15 TPM= 2.72 Transcript Type= NA chr15 68778535 68820895 68778535 68820895 - ENST00000465139.6@ANP32A ENST00000465139.6 protein_coding 68820698,68787770,68787413,68784397,68782956,68780410,68778535 68820895,68787919,68787535,68784595,68783053,68780473,68780142 Gene ID= ENSG00000140350.15 TPM= 57.95 Transcript Type= protein_coding chr15 68930500 68946811 68930500 68946811 + ENST00000310673.3@SPESP1 ENST00000310673.3 protein_coding 68930500,68945599 68930717,68946811 Gene ID= ENSG00000258484.3 TPM= 6.34 Transcript Type= protein_coding chr15 69160636 69272199 69160636 69272199 + transcript1468.chr15.nnic@GLCE transcript1468.chr15.nnic protein_coding 69160636,69210316,69255794,69261087,69268220 69160757,69210406,69256095,69261329,69272199 Gene ID= ENSG00000138604.9 TPM= 3.62 Transcript Type= NA chr15 69160550 69263977 69160550 69263977 + transcript1473.chr15.nic@GLCE transcript1473.chr15.nic protein_coding 69160550,69210316,69255794,69261087 69160757,69210406,69256392,69263977 Gene ID= ENSG00000138604.9 TPM= 1.81 Transcript Type= NA chr15 69160634 69272199 69160634 69272199 + ENST00000261858.6@GLCE ENST00000261858.6 protein_coding 69160634,69210316,69255794,69261087,69268220 69160757,69210406,69256392,69261329,69272199 Gene ID= ENSG00000138604.9 TPM= 17.21 Transcript Type= protein_coding chr15 69298890 69407636 69298890 69407636 + transcript1478.chr15.nnic@PAQR5 transcript1478.chr15.nnic protein_coding 69298890,69337341,69359317,69359966,69379883,69384677,69389654,69397468,69399974,69403581 69299056,69337501,69359422,69360131,69380010,69384882,69389780,69397564,69400115,69407636 Gene ID= ENSG00000137819.13 TPM= 2.72 Transcript Type= NA chr15 69298890 69407636 69298890 69407636 + transcript1482.chr15.nic@PAQR5 transcript1482.chr15.nic protein_coding 69298890,69337341,69379883,69384677,69389654,69397468,69399974,69403581 69299056,69337501,69380010,69384882,69389780,69397564,69400115,69407636 Gene ID= ENSG00000137819.13 TPM= 2.72 Transcript Type= NA chr15 69452814 69455547 69452814 69455547 + ENST00000357790.5@RPLP1 ENST00000357790.5 protein_coding 69452814,69455170,69455428 69453020,69455287,69455547 Gene ID= ENSG00000137818.11 TPM= 13.88 Transcript Type= protein_coding chr15 70047790 70098176 70047790 70098176 - ENST00000558939.5@TLE3 ENST00000558939.5 protein_coding 70096775,70096161,70095578,70094532,70076096,70074533,70066014,70064454,70060530,70059410,70058663,70058150,70057459,70056298,70055049,70054438,70053227,70052374,70051391,70047790 70098176,70096261,70095641,70094576,70076158,70074607,70066218,70064470,70060649,70059460,70058815,70058291,70057658,70056374,70055298,70054685,70053374,70052524,70051467,70050204 Gene ID= ENSG00000140332.15 TPM= 11.77 Transcript Type= protein_coding chr15 70654554 70763593 70654554 70763593 - ENST00000322954.10@UACA ENST00000322954.10 protein_coding 70763330,70699527,70695017,70691299,70690454,70687750,70687540,70684265,70682758,70679608,70678099,70677108,70676493,70671965,70671039,70666724,70664662,70660151,70654554 70763593,70699660,70695105,70691363,70690511,70687820,70687646,70684446,70682795,70679676,70678206,70677140,70676591,70672001,70671091,70669462,70664814,70660216,70657127 Gene ID= ENSG00000137831.14 TPM= 10.87 Transcript Type= protein_coding chr15 70851427 70854121 70851427 70854121 - ENST00000344870.4@LARP6 ENST00000344870.4 protein_coding 70853889,70851427 70854121,70851720 Gene ID= ENSG00000166173.10 TPM= 1.81 Transcript Type= protein_coding chr15 70881342 70892785 70881342 70892785 - ENST00000249861.8@THAP10 ENST00000249861.8 protein_coding 70891844,70882761,70881342 70892785,70882908,70882650 Gene ID= ENSG00000129028.8 TPM= 3.62 Transcript Type= protein_coding chr15 70892635 71050075 70892635 71050075 + ENST00000260382.9@LRRC49 ENST00000260382.9 protein_coding 70892635,70893584,70895849,70900922,70904552,70911532,70919050,70936761,70963785,70980101,70984094,71008379,71009807,71012804,71037179,71049409 70892942,70893640,70895936,70901024,70904755,70911598,70919193,70936822,70963932,70980184,70984257,71008616,71009992,71012913,71037332,71050075 Gene ID= ENSG00000137821.11 TPM= 7.24 Transcript Type= protein_coding chr15 72118296 72143688 72118296 72143688 + ENST00000340912.5@SENP8 ENST00000340912.5 protein_coding 72118296,72139577 72118464,72143688 Gene ID= ENSG00000166192.14 TPM= 4.53 Transcript Type= protein_coding chr15 72199026 72231242 72199026 72231242 - transcript1537.chr15.nic@PKM transcript1537.chr15.nic protein_coding 72231116,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72203022,72200474,72199026 72231242,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72203188,72200655,72199756 Gene ID= ENSG00000067225.17 TPM= 64.19 Transcript Type= NA chr15 72199032 72231206 72199032 72231206 - ENST00000335181.9@PKM ENST00000335181.9 protein_coding 72231116,72218944,72217409,72210347,72209673,72208621,72207127,72206728,72202454,72200474,72199032 72231206,72219110,72217500,72210478,72209859,72208891,72207277,72206880,72202620,72200655,72199756 Gene ID= ENSG00000067225.17 TPM= 2782.6 Transcript Type= protein_coding chr15 72241175 72272579 72241175 72272579 - transcript1560.chr15.nnic@PARP6 transcript1560.chr15.nnic protein_coding 72272503,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72249245,72242620,72242157,72241901,72241175 72272579,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72249314,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 2.11 Transcript Type= NA chr15 72241175 72272585 72241175 72272585 - transcript1561.chr15.nic@PARP6 transcript1561.chr15.nic protein_coding 72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72249245,72242620,72242157,72241901,72241175 72272585,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72249314,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 2.11 Transcript Type= NA chr15 72241175 72272585 72241175 72272585 - transcript1562.chr15.nnic@PARP6 transcript1562.chr15.nnic protein_coding 72272503,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72249245,72242620,72242157,72241901,72241175 72272585,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72249314,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 2.11 Transcript Type= NA chr15 72241175 72272585 72241175 72272585 - transcript1567.chr15.nic@PARP6 transcript1567.chr15.nic protein_coding 72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241175 72272585,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 6.95 Transcript Type= NA chr15 72241175 72272585 72241175 72272585 - transcript1570.chr15.nic@PARP6 transcript1570.chr15.nic protein_coding 72272393,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241175 72272585,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 8.3 Transcript Type= NA chr15 72241175 72272649 72241175 72272649 - transcript1575.chr15.nnic@PARP6 transcript1575.chr15.nnic protein_coding 72272503,72271023,72267475,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241175 72272649,72271287,72267671,72266822,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 1.97 Transcript Type= NA chr15 72241175 72272659 72241175 72272659 - transcript1580.chr15.nic@PARP6 transcript1580.chr15.nic protein_coding 72271023,72266745,72265897,72265413,72265081,72264555,72261558,72260478,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241175 72272659,72267671,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 2.42 Transcript Type= NA chr15 72241175 72272549 72241175 72272549 - transcript1581.chr15.nic@PARP6 transcript1581.chr15.nic protein_coding 72271023,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250845,72250020,72242620,72242157,72241901,72241175 72272549,72267671,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250954,72250092,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 2.87 Transcript Type= NA chr15 72241175 72272554 72241175 72272554 - transcript1583.chr15.nic@PARP6 transcript1583.chr15.nic protein_coding 72271023,72266745,72265897,72265413,72265081,72264555,72261558,72260538,72259608,72258037,72257348,72256465,72254455,72253437,72251207,72250020,72242620,72242157,72241901,72241175 72272554,72267671,72265991,72265473,72265171,72264621,72261707,72260688,72259661,72258132,72257440,72256590,72254520,72253504,72251255,72250092,72242699,72242220,72241985,72241557 Gene ID= ENSG00000137817.16 TPM= 1.97 Transcript Type= NA chr15 72343434 72376059 72343434 72376059 - transcript1594.chr15.nic@HEXA transcript1594.chr15.nic protein_coding 72375720,72356525,72355559,72353691,72353068,72351133,72350518,72349079,72348048,72347686,72346527,72345677,72345446,72343434 72376059,72356617,72355624,72353737,72353178,72351234,72350650,72349259,72348134,72347758,72346710,72346325,72345550,72344140 Gene ID= ENSG00000213614.9 TPM= 13.58 Transcript Type= NA chr15 72369959 72375989 72369959 72375989 - ENST00000567213.2@HEXA ENST00000567213.2 protein_coding 72375720,72369959 72375989,72370688 Gene ID= ENSG00000213614.9 TPM= 1.81 Transcript Type= protein_coding chr15 72474316 72586557 72474316 72586557 + transcript1619.chr15.nnic@ARIH1 transcript1619.chr15.nnic protein_coding 72474316,72518067,72544820,72555271,72561483,72563394,72566563,72567106,72570177,72572108,72580731,72582075,72583208 72475014,72518134,72544964,72555363,72561549,72563500,72566605,72567177,72570307,72572165,72580991,72582187,72586557 Gene ID= ENSG00000166233.14 TPM= 7.24 Transcript Type= NA chr15 72686187 72738476 72686187 72738476 + ENST00000268057.8@BBS4 ENST00000268057.8 protein_coding 72686187,72695177,72709700,72712244,72715291,72716778,72722794,72724528,72727940,72729616,72731305,72731555,72735113,72735825,72736762,72737478 72686251,72695228,72709779,72712307,72715402,72716850,72722847,72724655,72727994,72729684,72731457,72731726,72735182,72735966,72736963,72738476 Gene ID= ENSG00000140463.13 TPM= 26.26 Transcript Type= protein_coding chr15 72686186 72738475 72686186 72738475 + transcript1624.chr15.nic@BBS4 transcript1624.chr15.nic protein_coding 72686186,72695177,72709700,72712244,72716778,72722794,72724528,72727940,72729616,72731305,72731555,72735113,72735825,72736762,72737478 72686251,72695228,72709779,72712307,72716850,72722847,72724655,72727994,72729684,72731457,72731726,72735182,72735966,72736963,72738475 Gene ID= ENSG00000140463.13 TPM= 1.81 Transcript Type= NA chr15 72751368 72783765 72751368 72783765 - transcript1633.chr15.nic@ADPGK transcript1633.chr15.nic protein_coding 72783246,72774872,72771783,72760407,72756251,72755556,72751368 72783765,72775097,72771845,72760527,72756447,72755654,72752895 Gene ID= ENSG00000159322.17 TPM= 3.2 Transcript Type= NA chr15 72751369 72783785 72751369 72783785 - ENST00000311669.12@ADPGK ENST00000311669.12 protein_coding 72783459,72774872,72771783,72760407,72756251,72755556,72751369 72783785,72775097,72771845,72760527,72756447,72755654,72752892 Gene ID= ENSG00000159322.17 TPM= 57.23 Transcript Type= protein_coding chr15 72751368 72783703 72751368 72783703 - transcript1639.chr15.nic@ADPGK transcript1639.chr15.nic protein_coding 72783246,72771783,72760407,72756251,72755556,72751368 72783703,72771845,72760527,72756447,72755654,72752895 Gene ID= ENSG00000159322.17 TPM= 3.2 Transcript Type= NA chr15 72751368 72783776 72751368 72783776 - transcript1640.chr15.nic@ADPGK transcript1640.chr15.nic protein_coding 72783459,72774872,72760407,72756251,72755556,72751368 72783776,72775097,72760527,72756447,72755654,72752895 Gene ID= ENSG00000159322.17 TPM= 2.29 Transcript Type= NA chr15 72760104 72783776 72760104 72783776 - transcript1644.chr15.nnic@ADPGK transcript1644.chr15.nnic protein_coding 72783459,72774872,72771783,72760407,72760104 72783776,72775097,72771845,72760527,72760307 Gene ID= ENSG00000159322.17 TPM= 2.72 Transcript Type= NA chr15 72757219 72783765 72757219 72783765 - transcript1645.chr15.nic@ADPGK transcript1645.chr15.nic protein_coding 72783246,72774872,72771783,72757219 72783765,72775097,72771845,72760527 Gene ID= ENSG00000159322.17 TPM= 2.26 Transcript Type= NA chr15 72757219 72783776 72757219 72783776 - transcript1646.chr15.nic@ADPGK transcript1646.chr15.nic protein_coding 72783459,72774872,72771783,72757219 72783776,72775097,72771845,72760527 Gene ID= ENSG00000159322.17 TPM= 2.26 Transcript Type= NA chr15 72751369 72783731 72751369 72783731 - ENST00000567941.5@ADPGK ENST00000567941.5 protein_coding 72783246,72774872,72771783,72760407,72756251,72755556,72751369 72783731,72775097,72771845,72760527,72756447,72755654,72752892 Gene ID= ENSG00000159322.17 TPM= 5.61 Transcript Type= nonsense_mediated_decay chr15 73051688 73303441 73051688 73303441 + transcript1647.chr15.nic@NEO1 transcript1647.chr15.nic protein_coding 73051688,73052484,73116540,73122525,73126417,73135891,73176403,73178307,73236347,73244344,73249060,73249583,73253400,73254682,73258766,73260271,73266316,73270058,73270316,73272455,73273811,73278131,73282964,73288313,73289146,73293390,73298348,73301321,73302613 73051964,73052805,73116857,73122800,73126570,73136027,73176557,73178427,73236506,73244498,73249208,73249721,73253449,73254829,73258876,73260465,73266411,73270233,73270454,73272562,73274005,73278199,73283111,73288551,73289238,73293548,73298611,73301457,73303441 Gene ID= ENSG00000067141.16 TPM= 2.72 Transcript Type= NA chr15 73560014 73633413 73560014 73633413 - ENST00000345330.8@NPTN ENST00000345330.8 protein_coding 73633125,73597022,73591966,73587524,73573662,73570150,73563236,73561896,73560014 73633413,73597369,73592137,73587618,73573795,73570423,73563257,73561970,73561048 Gene ID= ENSG00000156642.16 TPM= 11.77 Transcript Type= protein_coding chr15 73684213 73714518 73684213 73714518 + ENST00000318443.9@CD276 ENST00000318443.9 protein_coding 73684213,73699586,73702255,73702772,73703659,73704176,73708339,73709648,73711135,73712934 73684460,73699718,73702593,73703086,73703997,73704472,73708473,73709689,73711170,73714518 Gene ID= ENSG00000103855.17 TPM= 137.34 Transcript Type= protein_coding chr15 73711132 73714514 73711132 73714514 + ENST00000559465.1@CD276 ENST00000559465.1 protein_coding 73711132,73712934 73711170,73714514 Gene ID= ENSG00000103855.17 TPM= 7.24 Transcript Type= retained_intron chr15 73926458 73952137 73926458 73952137 + ENST00000261921.7@LOXL1 ENST00000261921.7 protein_coding 73926458,73942854,73946417,73947067,73947807,73949459,73951831 73927885,73942962,73946554,73947223,73947902,73949574,73952137 Gene ID= ENSG00000129038.15 TPM= 26.26 Transcript Type= protein_coding chr15 73978923 73992348 73978923 73992348 - ENST00000541638.5@STOML1 ENST00000541638.5 protein_coding 73992091,73990351,73989108,73988599,73985318,73984659,73978923 73992348,73990457,73989257,73988802,73985513,73984871,73984130 Gene ID= ENSG00000067221.13 TPM= 40.75 Transcript Type= protein_coding chr15 73983218 73992348 73983218 73992348 - ENST00000316911.10@STOML1 ENST00000316911.10 protein_coding 73992091,73990351,73988599,73985318,73984659,73983218 73992348,73990457,73988802,73985513,73984871,73984130 Gene ID= ENSG00000067221.13 TPM= 5.43 Transcript Type= protein_coding chr15 73983217 73992316 73983217 73992316 - transcript1693.chr15.nic@STOML1 transcript1693.chr15.nic protein_coding 73992091,73990351,73988599,73985318,73984659,73983217 73992316,73990457,73989257,73985513,73984871,73984130 Gene ID= ENSG00000067221.13 TPM= 2.72 Transcript Type= NA chr15 73983237 73994622 73983237 73994622 - ENST00000561656.5@STOML1 ENST00000561656.5 protein_coding 73994551,73990351,73989108,73988599,73985318,73984659,73983237 73994622,73990457,73989257,73988802,73985513,73984868,73984130 Gene ID= ENSG00000067221.13 TPM= 4.53 Transcript Type= protein_coding chr15 73994697 74036393 73994697 74036393 + transcript1679.chr15.nic@PML transcript1679.chr15.nic protein_coding 73994697,73998004,74022828,74024857,74032572,74033156,74034478,74035143 73994941,73998476,74023408,74024927,74032715,74033414,74034530,74036393 Gene ID= ENSG00000140464.19 TPM= 8.96 Transcript Type= NA chr15 73994749 74036393 73994749 74036393 + transcript1689.chr15.nic@PML transcript1689.chr15.nic protein_coding 73994749,73998004,74022828,74024857,74033156,74034478,74035143 73994941,73998476,74023408,74024927,74033414,74034530,74036393 Gene ID= ENSG00000140464.19 TPM= 2.63 Transcript Type= NA chr15 73994729 74047812 73994729 74047812 + ENST00000565898.5@PML ENST00000565898.5 protein_coding 73994729,73998004,74022828,74024857,74033156,74034478,74042989,74044221 73994941,73998476,74023408,74024927,74033414,74034530,74043139,74047812 Gene ID= ENSG00000140464.19 TPM= 14.04 Transcript Type= protein_coding chr15 73994717 74036394 73994717 74036394 + ENST00000354026.10@PML ENST00000354026.10 protein_coding 73994717,73998004,74022828,74024857,74033156,74034478,74035172 73994941,73998476,74023408,74024927,74033414,74034530,74036394 Gene ID= ENSG00000140464.19 TPM= 3.98 Transcript Type= protein_coding chr15 73994744 74036394 73994744 74036394 + ENST00000435786.6@PML ENST00000435786.6 protein_coding 73994744,73998004,74022828,74024857,74032572,74033156,74034478 73994941,73998476,74023408,74024927,74032715,74033414,74036394 Gene ID= ENSG00000140464.19 TPM= 5.8 Transcript Type= protein_coding chr15 73994717 74046771 73994717 74046771 + ENST00000268058.7@PML ENST00000268058.7 protein_coding 73994717,73998004,74022828,74024857,74032572,74033156,74034478,74042989,74044221 73994941,73998476,74023408,74024927,74032715,74033414,74034530,74043139,74046771 Gene ID= ENSG00000140464.19 TPM= 10.41 Transcript Type= protein_coding chr15 73994744 74043338 73994744 74043338 + ENST00000564428.5@PML ENST00000564428.5 protein_coding 73994744,73998004,74022828,74024857,74033156,74034478,74042989 73994941,73998476,74023408,74024927,74033414,74034530,74043338 Gene ID= ENSG00000140464.19 TPM= 3.62 Transcript Type= protein_coding chr15 73994744 74036394 73994744 74036394 + ENST00000436891.7@PML ENST00000436891.7 protein_coding 73994744,73998004,74022828,74024857,74032572,74033156,74034478,74035172 73994941,73998476,74023408,74024927,74032715,74033422,74034530,74036394 Gene ID= ENSG00000140464.19 TPM= 3.98 Transcript Type= protein_coding chr15 74173671 74176872 74173671 74176872 + ENST00000249842.7@ISLR ENST00000249842.7 protein_coding 74173671,74174851 74174019,74176872 Gene ID= ENSG00000129009.12 TPM= 30.79 Transcript Type= protein_coding chr15 74174501 74176872 74174501 74176872 + ENST00000395118.1@ISLR ENST00000395118.1 protein_coding 74174501,74174851 74174653,74176872 Gene ID= ENSG00000129009.12 TPM= 16.3 Transcript Type= protein_coding chr15 74337759 74367740 74337759 74367740 - ENST00000268053.10@CYP11A1 ENST00000268053.10 protein_coding 74367317,74347900,74345044,74343789,74342977,74339587,74339237,74338571,74337759 74367740,74348055,74345243,74343992,74343137,74339753,74339315,74338768,74338103 Gene ID= ENSG00000140459.17 TPM= 3916.84 Transcript Type= protein_coding chr15 74337759 74366206 74337759 74366206 - ENST00000358632.8@CYP11A1 ENST00000358632.8 protein_coding 74365716,74347900,74345044,74343789,74342977,74339587,74339237,74338571,74337759 74366206,74348055,74345243,74343992,74343137,74339753,74339315,74338768,74338103 Gene ID= ENSG00000140459.17 TPM= 140.71 Transcript Type= protein_coding chr15 74445976 74461177 74445976 74461177 - transcript1761.chr15.nic@UBL7 transcript1761.chr15.nic protein_coding 74461037,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445976 74461177,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448558,74446227 Gene ID= ENSG00000138629.15 TPM= 3.4 Transcript Type= NA chr15 74445977 74461178 74445977 74461178 - ENST00000395081.6@UBL7 ENST00000395081.6 protein_coding 74461037,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977 74461178,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227 Gene ID= ENSG00000138629.15 TPM= 24.22 Transcript Type= protein_coding chr15 74445977 74461182 74445977 74461182 - ENST00000361351.8@UBL7 ENST00000361351.8 protein_coding 74461108,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445977 74461182,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227 Gene ID= ENSG00000138629.15 TPM= 39.62 Transcript Type= protein_coding chr15 74445976 74461189 74445976 74461189 - transcript1765.chr15.nnic@UBL7 transcript1765.chr15.nnic protein_coding 74461158,74458684,74456552,74452296,74451436,74450802,74449936,74449626,74449186,74448478,74445976 74461189,74458896,74456671,74452378,74451520,74450859,74450069,74449675,74449353,74448600,74446227 Gene ID= ENSG00000138629.15 TPM= 10.64 Transcript Type= NA chr15 74461277 74481290 74461277 74481290 + transcript1773.chr15.nic@UBL7-AS1 transcript1773.chr15.nic antisense_RNA 74461277,74466036,74479060,74481051 74462098,74466130,74479278,74481290 Gene ID= ENSG00000247240.7 TPM= 1.81 Transcript Type= NA chr15 74614737 74630116 74614737 74630116 + transcript1782.chr15.nic@CLK3 transcript1782.chr15.nic protein_coding 74614737,74619197,74620009,74622120,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942 74615898,74619348,74620225,74622216,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74630116 Gene ID= ENSG00000179335.18 TPM= 4.53 Transcript Type= NA chr15 74615838 74630199 74615838 74630199 + transcript1784.chr15.nic@CLK3 transcript1784.chr15.nic protein_coding 74615838,74619197,74620009,74622494,74624902,74625802,74627352,74627539,74627970,74628604,74628942 74615898,74619348,74620225,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74630199 Gene ID= ENSG00000179335.18 TPM= 2.72 Transcript Type= NA chr15 74615851 74630200 74615851 74630200 + transcript1786.chr15.nic@CLK3 transcript1786.chr15.nic protein_coding 74615851,74619197,74620009,74624902,74625802,74627352,74627539,74627970,74628604,74628942,74629707 74615898,74619348,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74629032,74630200 Gene ID= ENSG00000179335.18 TPM= 4.98 Transcript Type= NA chr15 74615842 74630199 74615842 74630199 + transcript1787.chr15.nic@CLK3 transcript1787.chr15.nic protein_coding 74615842,74619197,74620009,74624902,74625802,74627352,74627539,74627970,74628604,74628942 74615898,74619348,74622560,74625018,74625968,74627446,74627668,74628052,74628683,74630199 Gene ID= ENSG00000179335.18 TPM= 2.72 Transcript Type= NA chr15 74630558 74696043 74630558 74696043 - ENST00000315127.8@EDC3 ENST00000315127.8 protein_coding 74695880,74674961,74671455,74655733,74640466,74635409,74630558 74696043,74675142,74671774,74656068,74640619,74635626,74632946 Gene ID= ENSG00000179151.11 TPM= 20.83 Transcript Type= protein_coding chr15 74638351 74696034 74638351 74696034 - transcript1792.chr15.nic@EDC3 transcript1792.chr15.nic protein_coding 74695880,74674961,74671455,74655733,74638351 74696034,74675142,74671774,74656068,74640619 Gene ID= ENSG00000179151.11 TPM= 3.62 Transcript Type= NA chr15 74632542 74696000 74632542 74696000 - ENST00000568176.5@EDC3 ENST00000568176.5 protein_coding 74695880,74687091,74674961,74671455,74655733,74640466,74635409,74632542 74696000,74687179,74675142,74671774,74656068,74640619,74635626,74632946 Gene ID= ENSG00000179151.11 TPM= 4.53 Transcript Type= protein_coding chr15 74782057 74803198 74782057 74803198 + ENST00000220003.13@CSK ENST00000220003.13 protein_coding 74782057,74798233,74798615,74798826,74799272,74800412,74800681,74800823,74801012,74801522,74801695,74801997,74802331 74782720,74798312,74798728,74798938,74799491,74800505,74800746,74800922,74801102,74801595,74801890,74802083,74803198 Gene ID= ENSG00000103653.16 TPM= 28.07 Transcript Type= protein_coding chr15 74836116 74843224 74836116 74843224 - transcript1820.chr15.nic@ULK3 transcript1820.chr15.nic protein_coding 74843004,74842075,74841405,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836116 74843224,74842420,74841509,74840641,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244 Gene ID= ENSG00000140474.12 TPM= 7 Transcript Type= NA chr15 74836116 74843149 74836116 74843149 - transcript1822.chr15.nic@ULK3 transcript1822.chr15.nic protein_coding 74843004,74842280,74842075,74841405,74840234,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836116 74843149,74842420,74842195,74841509,74840641,74839713,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244 Gene ID= ENSG00000140474.12 TPM= 5.33 Transcript Type= NA chr15 74836116 74843197 74836116 74843197 - ENST00000440863.6@ULK3 ENST00000440863.6 protein_coding 74843004,74842280,74842075,74841405,74840498,74840234,74839558,74839268,74839010,74838643,74838440,74838266,74838152,74837751,74837369,74836116 74843197,74842420,74842195,74841509,74840641,74840316,74839713,74839373,74839050,74838745,74838504,74838344,74838192,74837798,74837435,74837244 Gene ID= ENSG00000140474.12 TPM= 77.03 Transcript Type= protein_coding chr15 74843732 74873379 74843732 74873379 - transcript1829.chr15.nnic@SCAMP2 transcript1829.chr15.nnic protein_coding 74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74844893,74843732 74873379,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217,74843794 Gene ID= ENSG00000140497.16 TPM= 9.06 Transcript Type= NA chr15 74843730 74873365 74843730 74873365 - ENST00000268099.13@SCAMP2 ENST00000268099.13 protein_coding 74873199,74854581,74854021,74852069,74851353,74850514,74848600,74845473,74843730 74873365,74854649,74854119,74852186,74851481,74850673,74848701,74845593,74845217 Gene ID= ENSG00000140497.16 TPM= 156.66 Transcript Type= protein_coding chr15 74890007 74902219 74890007 74902219 + ENST00000352410.8@MPI ENST00000352410.8 protein_coding 74890007,74890527,74891379,74892661,74893138,74896152,74897011,74897512 74890089,74890654,74891579,74892802,74893320,74896325,74897219,74902219 Gene ID= ENSG00000178802.17 TPM= 91.46 Transcript Type= protein_coding chr15 74890048 74899436 74890048 74899436 + transcript1838.chr15.nic@MPI transcript1838.chr15.nic protein_coding 74890048,74890527,74891379,74892661,74893138,74896152,74897011,74897512 74890201,74890654,74891579,74892802,74893320,74896325,74897219,74899436 Gene ID= ENSG00000178802.17 TPM= 11.77 Transcript Type= NA chr15 74890039 74899441 74890039 74899441 + ENST00000566377.5@MPI ENST00000566377.5 protein_coding 74890039,74890527,74891379,74892661,74893138,74896152,74897512 74890089,74890654,74891579,74892802,74893320,74896325,74899441 Gene ID= ENSG00000178802.17 TPM= 11.77 Transcript Type= protein_coding chr15 74899993 74906813 74899993 74906813 - transcript1848.chr15.nic@FAM219B transcript1848.chr15.nic protein_coding 74906587,74906278,74905154,74904982,74904664,74902604,74899993 74906813,74906365,74905231,74905059,74904712,74902786,74902063 Gene ID= ENSG00000178761.14 TPM= 2.11 Transcript Type= NA chr15 74899993 74906795 74899993 74906795 - transcript1856.chr15.nic@FAM219B transcript1856.chr15.nic protein_coding 74906587,74906324,74905154,74904664,74902604,74899993 74906795,74906365,74905231,74904712,74902786,74902063 Gene ID= ENSG00000178761.14 TPM= 2.11 Transcript Type= NA chr15 74899993 74906818 74899993 74906818 - transcript1862.chr15.nic@FAM219B transcript1862.chr15.nic protein_coding 74906587,74906278,74904664,74902604,74899993 74906818,74906365,74905231,74902786,74902063 Gene ID= ENSG00000178761.14 TPM= 2.11 Transcript Type= NA chr15 74899992 74906883 74899992 74906883 - ENST00000569524.5@FAM219B ENST00000569524.5 protein_coding 74906587,74905154,74904664,74899992 74906883,74905231,74904712,74902786 Gene ID= ENSG00000178761.14 TPM= 18.86 Transcript Type= nonsense_mediated_decay chr15 74899988 74906843 74899988 74906843 - transcript1865.chr15.nic@FAM219B transcript1865.chr15.nic protein_coding 74906587,74904664,74899988 74906843,74905231,74902786 Gene ID= ENSG00000178761.14 TPM= 7.09 Transcript Type= NA chr15 74899992 74906837 74899992 74906837 - ENST00000563119.5@FAM219B ENST00000563119.5 protein_coding 74906587,74906278,74905154,74904664,74902604,74899992 74906837,74906365,74905231,74904712,74902786,74902063 Gene ID= ENSG00000178761.14 TPM= 5.73 Transcript Type= protein_coding chr15 74919791 74938168 74919791 74938168 - ENST00000322347.10@COX5A ENST00000322347.10 protein_coding 74937915,74929116,74926766,74923648,74919791 74938168,74929232,74926887,74923770,74920442 Gene ID= ENSG00000178741.11 TPM= 141.72 Transcript Type= protein_coding chr15 74920280 74938083 74920280 74938083 - ENST00000568783.5@COX5A ENST00000568783.5 protein_coding 74937915,74929116,74926766,74920280 74938083,74929232,74926887,74920442 Gene ID= ENSG00000178741.11 TPM= 1.81 Transcript Type= protein_coding chr15 74920275 74938080 74920275 74938080 - ENST00000567270.5@COX5A ENST00000567270.5 protein_coding 74937915,74926766,74923648,74920275 74938080,74926887,74923770,74920442 Gene ID= ENSG00000178741.11 TPM= 2.26 Transcript Type= protein_coding chr15 74920275 74938070 74920275 74938070 - ENST00000562233.5@COX5A ENST00000562233.5 protein_coding 74937915,74929116,74920275 74938070,74929232,74920442 Gene ID= ENSG00000178741.11 TPM= 2.72 Transcript Type= protein_coding chr15 75023555 75050726 75023555 75050726 + ENST00000342932.7@PPCDC ENST00000342932.7 protein_coding 75023555,75028247,75043441,75044386,75048553,75049150 75023626,75028453,75043536,75044514,75048721,75050726 Gene ID= ENSG00000138621.11 TPM= 9.51 Transcript Type= protein_coding chr15 75023555 75050722 75023555 75050722 + transcript1881.chr15.nic@PPCDC transcript1881.chr15.nic protein_coding 75023555,75028247,75044386,75048553,75049150 75023626,75028453,75044514,75048721,75050722 Gene ID= ENSG00000138621.11 TPM= 2.26 Transcript Type= NA chr15 75043275 75049738 75043275 75049738 + ENST00000563393.1@PPCDC ENST00000563393.1 protein_coding 75043275,75044386,75048553,75049150 75043536,75044514,75048721,75049738 Gene ID= ENSG00000138621.11 TPM= 3.62 Transcript Type= protein_coding chr15 75201882 75212166 75201882 75212166 + transcript1886.chr15.nic@C15orf39 transcript1886.chr15.nic protein_coding 75201882,75205999,75210749 75202059,75208876,75212166 Gene ID= ENSG00000167173.18 TPM= 12.68 Transcript Type= NA chr15 75336048 75340272 75336048 75340272 + transcript1892.chr15.nnic@COMMD4 transcript1892.chr15.nnic protein_coding 75336048,75338062,75338355,75338646,75338985,75339264,75339702,75339965 75336092,75338133,75338387,75338685,75339104,75339344,75339878,75340272 Gene ID= ENSG00000140365.15 TPM= 2.11 Transcript Type= NA chr15 75335891 75340273 75335891 75340273 + ENST00000267935.12@COMMD4 ENST00000267935.12 protein_coding 75335891,75338062,75338355,75338646,75338985,75339264,75339702,75339965 75336092,75338133,75338420,75338685,75339104,75339344,75339878,75340273 Gene ID= ENSG00000140365.15 TPM= 72.74 Transcript Type= protein_coding chr15 75336022 75340272 75336022 75340272 + transcript1903.chr15.nic@COMMD4 transcript1903.chr15.nic protein_coding 75336022,75338062,75339965 75336092,75339878,75340272 Gene ID= ENSG00000140365.15 TPM= 2.11 Transcript Type= NA chr15 75347881 75355257 75347881 75355257 + transcript1988.chr15.nnic@NEIL1 transcript1988.chr15.nnic protein_coding 75347881,75348884,75351301,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964 75347999,75349339,75351376,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 1.81 Transcript Type= NA chr15 75346990 75357114 75346990 75357114 + ENST00000355059.8@NEIL1 ENST00000355059.8 protein_coding 75346990,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964 75347473,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75357114 Gene ID= ENSG00000140398.13 TPM= 7.3 Transcript Type= protein_coding chr15 75347628 75355257 75347628 75355257 + transcript1997.chr15.nic@NEIL1 transcript1997.chr15.nic protein_coding 75347628,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964 75347999,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 5.43 Transcript Type= NA chr15 75347024 75355257 75347024 75355257 + transcript2007.chr15.nnic@NEIL1 transcript2007.chr15.nnic protein_coding 75347024,75348884,75351301,75352111,75352324,75352602,75354653,75354964 75347473,75349339,75351376,75352230,75352387,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 2.72 Transcript Type= NA chr15 75347621 75355257 75347621 75355257 + transcript2011.chr15.nnic@NEIL1 transcript2011.chr15.nnic protein_coding 75347621,75348884,75351301,75352111,75352324,75352602,75354653,75354964 75348723,75349339,75351376,75352230,75352387,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 2.72 Transcript Type= NA chr15 75347625 75355257 75347625 75355257 + transcript2012.chr15.nnic@NEIL1 transcript2012.chr15.nnic protein_coding 75347625,75348884,75351301,75352111,75352324,75352602,75354653,75354964 75348026,75349339,75351376,75352230,75352387,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 1.81 Transcript Type= NA chr15 75348098 75355257 75348098 75355257 + transcript2016.chr15.nnic@NEIL1 transcript2016.chr15.nnic protein_coding 75348098,75348884,75351301,75352111,75352324,75352602,75354653,75354964 75348334,75349339,75351376,75352230,75352387,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 2.72 Transcript Type= NA chr15 75347024 75355257 75347024 75355257 + transcript2018.chr15.nic@NEIL1 transcript2018.chr15.nic protein_coding 75347024,75348884,75352111,75352324,75352602,75354653,75354964 75347473,75349339,75352230,75352387,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 6.34 Transcript Type= NA chr15 75347848 75355257 75347848 75355257 + transcript2022.chr15.nic@NEIL1 transcript2022.chr15.nic protein_coding 75347848,75348884,75352111,75352324,75352602,75354653,75354964 75347999,75349339,75352230,75352387,75354492,75354818,75355257 Gene ID= ENSG00000140398.13 TPM= 2.72 Transcript Type= NA chr15 75347638 75355247 75347638 75355247 + ENST00000569035.5@NEIL1 ENST00000569035.5 protein_coding 75347638,75348884,75352111,75352324,75352602,75353739,75354250,75354431,75354653,75354964 75348026,75349339,75352230,75352387,75352701,75353866,75354277,75354492,75354818,75355247 Gene ID= ENSG00000140398.13 TPM= 5.43 Transcript Type= protein_coding chr15 75355794 75362201 75355794 75362201 - transcript1969.chr15.nic@MAN2C1 transcript1969.chr15.nic protein_coding 75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355794 75362201,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356380,75356219,75356032 Gene ID= ENSG00000140400.16 TPM= 7.3 Transcript Type= NA chr15 75355792 75362255 75355792 75362255 - transcript1972.chr15.nic@MAN2C1 transcript1972.chr15.nic protein_coding 75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792 75362255,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032 Gene ID= ENSG00000140400.16 TPM= 62.63 Transcript Type= NA chr15 75355792 75368630 75355792 75368630 - ENST00000267978.9@MAN2C1 ENST00000267978.9 protein_coding 75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792 75368630,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032 Gene ID= ENSG00000140400.16 TPM= 91.15 Transcript Type= protein_coding chr15 75355792 75368592 75355792 75368592 - ENST00000569482.5@MAN2C1 ENST00000569482.5 protein_coding 75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792 75368592,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359425,75359153,75358808,75358618,75358344,75356902,75356685,75356380,75356219,75356032 Gene ID= ENSG00000140400.16 TPM= 11.83 Transcript Type= protein_coding chr15 75355792 75368595 75355792 75368595 - ENST00000565683.5@MAN2C1 ENST00000565683.5 protein_coding 75368483,75368073,75367511,75366522,75364488,75363999,75362642,75362343,75361855,75361604,75361286,75361046,75360565,75360090,75359903,75359620,75359328,75359059,75358704,75358462,75358201,75356793,75356606,75356301,75356110,75355792 75368595,75368198,75367634,75366592,75364665,75364188,75362748,75362453,75361947,75361720,75361381,75361191,75360688,75360211,75359988,75359775,75359438,75359191,75358808,75358618,75358344,75356902,75356685,75356449,75356219,75356032 Gene ID= ENSG00000140400.16 TPM= 1.96 Transcript Type= protein_coding chr15 75370932 75451690 75370932 75451690 - transcript1959.chr15.nic@SIN3A transcript1959.chr15.nic protein_coding 75451423,75436346,75430187,75422647,75414205,75412763,75411492,75410134,75409836,75407055,75401852,75400730,75400040,75396258,75394680,75392242,75389652,75384264,75381613,75380629,75375665,75370932 75451690,75436443,75430408,75422823,75414311,75413045,75411743,75410286,75409991,75407144,75401970,75400940,75400156,75396496,75394863,75392815,75389821,75384437,75381705,75380723,75375872,75372209 Gene ID= ENSG00000169375.15 TPM= 8.15 Transcript Type= NA chr15 75369379 75451704 75369379 75451704 - ENST00000394947.7@SIN3A ENST00000394947.7 protein_coding 75451423,75430187,75422647,75414205,75412763,75411492,75410134,75409836,75407055,75401852,75400730,75400040,75396258,75394680,75392242,75389652,75384264,75381613,75380629,75375665,75369379 75451704,75430408,75422823,75414311,75413045,75411743,75410286,75409991,75407144,75401970,75400940,75400156,75396496,75394863,75392815,75389821,75384437,75381705,75380723,75375872,75372209 Gene ID= ENSG00000169375.15 TPM= 14.49 Transcript Type= protein_coding chr15 75467125 75579466 75467125 75579466 - transcript2035.chr15.nnic@PTPN9 transcript2035.chr15.nnic protein_coding 75579386,75578714,75527118,75524209,75523121,75517259,75508917,75505675,75490208,75479848,75473689,75470680,75469792,75467125 75579466,75579299,75527261,75524298,75523245,75517364,75509027,75506003,75490301,75479914,75473767,75470830,75469999,75468983 Gene ID= ENSG00000169410.9 TPM= 31.69 Transcript Type= NA chr15 75598089 75626461 75598089 75626461 - transcript2047.chr15.nic@SNUPN transcript2047.chr15.nic protein_coding 75626239,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598089 75626461,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681 Gene ID= ENSG00000169371.13 TPM= 4.98 Transcript Type= NA chr15 75598083 75625815 75598083 75625815 - ENST00000308588.9@SNUPN ENST00000308588.9 protein_coding 75625666,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598083 75625815,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681 Gene ID= ENSG00000169371.13 TPM= 24.9 Transcript Type= protein_coding chr15 75598122 75625693 75598122 75625693 - ENST00000564675.5@SNUPN ENST00000564675.5 protein_coding 75625336,75620894,75617408,75609890,75609558,75607216,75605150,75601138,75598122 75625693,75621056,75617552,75609994,75609651,75607313,75605227,75601218,75598681 Gene ID= ENSG00000169371.13 TPM= 7.24 Transcript Type= protein_coding chr15 75647906 75662301 75647906 75662301 + ENST00000308527.5@SNX33 ENST00000308527.5 protein_coding 75647906,75656962 75650573,75662301 Gene ID= ENSG00000173548.8 TPM= 64.29 Transcript Type= protein_coding chr15 75674322 75712848 75674322 75712848 - ENST00000308508.5@CSPG4 ENST00000308508.5 protein_coding 75712668,75693070,75687276,75685219,75684736,75682843,75682607,75682293,75677703,75674322 75712848,75693233,75690812,75685701,75684912,75683041,75682741,75682459,75677886,75677384 Gene ID= ENSG00000173546.7 TPM= 1.81 Transcript Type= protein_coding chr15 75843448 75901070 75843448 75901070 + transcript2061.chr15.nnic@UBE2Q2 transcript2061.chr15.nnic protein_coding 75843448,75854386,75859878,75868951,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427 75843846,75854487,75859982,75869010,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901070 Gene ID= ENSG00000140367.11 TPM= 1.81 Transcript Type= NA chr15 75843153 75901044 75843153 75901044 + transcript2064.chr15.nic@UBE2Q2 transcript2064.chr15.nic protein_coding 75843153,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75899427 75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75901044 Gene ID= ENSG00000140367.11 TPM= 6.34 Transcript Type= NA chr15 75843285 75901078 75843285 75901078 + ENST00000267938.8@UBE2Q2 ENST00000267938.8 protein_coding 75843285,75854386,75859878,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427 75843846,75854487,75859982,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901078 Gene ID= ENSG00000140367.11 TPM= 36.22 Transcript Type= protein_coding chr15 75843307 75901044 75843307 75901044 + ENST00000569423.5@UBE2Q2 ENST00000569423.5 protein_coding 75843307,75854386,75868951,75873428,75876187,75877961,75879098,75883366,75890435,75890919,75896995,75899427 75843846,75854487,75869010,75873568,75876271,75878021,75879188,75883424,75890483,75891014,75897061,75901044 Gene ID= ENSG00000140367.11 TPM= 6.34 Transcript Type= protein_coding chr15 75903859 75942510 75903859 75942510 + ENST00000308275.7@FBXO22 ENST00000308275.7 protein_coding 75903859,75904491,75913203,75914110,75917230,75929884,75932685 75904103,75904629,75913290,75914205,75917394,75930049,75942510 Gene ID= ENSG00000167196.13 TPM= 37.13 Transcript Type= protein_coding chr15 75903878 75934107 75903878 75934107 + ENST00000569022.1@FBXO22 ENST00000569022.1 protein_coding 75903878,75913203,75914110,75917230,75929884,75932685 75904103,75913290,75914205,75917394,75930049,75934107 Gene ID= ENSG00000167196.13 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr15 76059837 76204963 76059837 76204963 + ENST00000388942.7@TMEM266 ENST00000388942.7 protein_coding 76059837,76134168,76137707,76156604,76160095,76169816,76170993,76175559,76191968,76202202,76203741 76060016,76134301,76137895,76156758,76160168,76169872,76171131,76175674,76192157,76202264,76204963 Gene ID= ENSG00000169758.12 TPM= 1.81 Transcript Type= protein_coding chr15 76215355 76311469 76215355 76311469 - ENST00000557943.5@ETFA ENST00000557943.5 protein_coding 76311350,76295591,76292619,76292431,76287846,76286371,76285637,76283757,76274412,76231333,76225849,76215355 76311469,76295737,76292700,76292513,76287945,76286481,76285738,76283825,76274494,76231398,76225929,76216597 Gene ID= ENSG00000140374.15 TPM= 229.4 Transcript Type= protein_coding chr15 76348197 76905427 76348197 76905427 - transcript2105.chr15.nic@SCAPER transcript2105.chr15.nic protein_coding 76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771724,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665653,76621764,76574158,76504859,76471212,76434078,76404524,76381378,76376162,76353949,76351237,76348197 76905427,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789,76621829,76574284,76504974,76471335,76434310,76404679,76381615,76376311,76354140,76351288,76348736 Gene ID= ENSG00000140386.12 TPM= 5.05 Transcript Type= NA chr15 76348196 76905117 76348196 76905117 - transcript2106.chr15.nnic@SCAPER transcript2106.chr15.nnic protein_coding 76904859,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771742,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665653,76621764,76574158,76504859,76471212,76434078,76404524,76381378,76376162,76353949,76351237,76348196 76905117,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789,76621829,76574284,76504974,76471335,76434310,76404679,76381615,76376311,76354140,76351288,76348736 Gene ID= ENSG00000140386.12 TPM= 3.24 Transcript Type= NA chr15 76348197 76905340 76348197 76905340 - transcript2109.chr15.nnic@SCAPER transcript2109.chr15.nnic protein_coding 76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771724,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665653,76621764,76574158,76504859,76471212,76434078,76381378,76376162,76353949,76351237,76348197 76905340,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789,76621829,76574284,76504974,76471335,76434310,76381615,76376311,76354140,76351288,76348736 Gene ID= ENSG00000140386.12 TPM= 2.04 Transcript Type= NA chr15 76765955 76905354 76765955 76905354 - transcript2113.chr15.nic@SCAPER transcript2113.chr15.nic protein_coding 76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771742,76765955 76905354,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088 Gene ID= ENSG00000140386.12 TPM= 1.81 Transcript Type= NA chr15 76347904 76905335 76347904 76905335 - ENST00000563290.5@SCAPER ENST00000563290.5 protein_coding 76905299,76883812,76862416,76857809,76841734,76804533,76800248,76795280,76774855,76771742,76766918,76765563,76765337,76764961,76753808,76733229,76728595,76705903,76702850,76701758,76665653,76621764,76574158,76504859,76471212,76434078,76404524,76381378,76376162,76353949,76351237,76347904 76905335,76883876,76862533,76857879,76841931,76804633,76800364,76795440,76775117,76771954,76767088,76765638,76765454,76765072,76753948,76733384,76728737,76705984,76703002,76701865,76665789,76621829,76574284,76504974,76471335,76434310,76404679,76381615,76376311,76354140,76351288,76348736 Gene ID= ENSG00000140386.12 TPM= 11.39 Transcript Type= protein_coding chr15 76931619 76954392 76931619 76954392 + ENST00000394885.7@RCN2 ENST00000394885.7 protein_coding 76931619,76932361,76935526,76943758,76947421,76948410,76949070 76931985,76932466,76935722,76943871,76947517,76948552,76954392 Gene ID= ENSG00000117906.13 TPM= 86.93 Transcript Type= protein_coding chr15 76995085 77037332 76995085 77037332 + ENST00000558012.5@PSTPIP1 ENST00000558012.5 protein_coding 76995085,77018148,77018457,77025284,77025498,77027852,77028554,77029529,77030502,77031180,77032298,77032862,77035508,77035802,77037045 76995609,77018248,77018531,77025318,77025604,77027914,77028652,77029574,77030581,77031278,77032394,77032952,77035563,77035935,77037332 Gene ID= ENSG00000140368.12 TPM= 3.62 Transcript Type= protein_coding chr15 77041404 77071228 77041404 77071228 - ENST00000267970.8@TSPAN3 ENST00000267970.8 protein_coding 77070892,77056064,77055789,77054178,77052777,77052385,77041404 77071228,77056255,77055863,77054279,77052929,77052468,77046927 Gene ID= ENSG00000140391.14 TPM= 321.02 Transcript Type= protein_coding chr15 77046030 77071109 77046030 77071109 - ENST00000424443.7@TSPAN3 ENST00000424443.7 protein_coding 77070892,77055789,77054178,77052777,77052385,77046030 77071109,77055863,77054279,77052929,77052468,77046927 Gene ID= ENSG00000140391.14 TPM= 4.07 Transcript Type= protein_coding chr15 77046060 77071122 77046060 77071122 - ENST00000561277.5@TSPAN3 ENST00000561277.5 protein_coding 77071005,77056064,77055789,77054178,77052777,77052385,77046060 77071122,77056255,77055863,77054279,77052929,77052468,77046927 Gene ID= ENSG00000140391.14 TPM= 4.53 Transcript Type= protein_coding chr15 77420723 77479805 77420723 77479805 + transcript2134.chr15.nic@HMG20A transcript2134.chr15.nic protein_coding 77420723,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179 77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479805 Gene ID= ENSG00000140382.14 TPM= 2.72 Transcript Type= NA chr15 77420651 77485607 77420651 77485607 + ENST00000336216.8@HMG20A ENST00000336216.8 protein_coding 77420651,77458404,77464240,77467095,77470910,77471783,77477555,77478295,77479179,77482970 77421004,77458496,77464387,77467307,77471042,77471814,77477630,77478510,77479321,77485607 Gene ID= ENSG00000140382.14 TPM= 34.41 Transcript Type= protein_coding chr15 77988560 77993233 77988560 77993233 + transcript2144.chr15.nnic@ADAMTS7P3 transcript2144.chr15.nnic transcribed_unprocessed_pseudogene 77988560,77988717,77990069,77991337,77992931 77988636,77988863,77990733,77992731,77993233 Gene ID= ENSG00000261143.1 TPM= 1.81 Transcript Type= NA chr15 77994989 78077737 77994989 78077737 - transcript2136.chr15.nnic@TBC1D2B transcript2136.chr15.nnic protein_coding 78077293,78054034,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77998195,77994989 78077737,78054187,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998355,77995063 Gene ID= ENSG00000167202.11 TPM= 2.26 Transcript Type= NA chr15 77994975 78077695 77994975 78077695 - transcript2141.chr15.nnic@TBC1D2B transcript2141.chr15.nnic protein_coding 78077293,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77994975 78077695,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998355 Gene ID= ENSG00000167202.11 TPM= 9.06 Transcript Type= NA chr15 77994985 78077652 77994985 78077652 - ENST00000300584.7@TBC1D2B ENST00000300584.7 protein_coding 78077293,78054034,78044900,78030007,78025259,78024156,78017847,78016546,78012823,78008997,78003305,78001619,77994985 78077652,78054187,78045068,78030170,78025497,78024539,78017957,78016739,78013317,78009114,78003490,78001740,77998355 Gene ID= ENSG00000167202.11 TPM= 42.11 Transcript Type= protein_coding chr15 78104606 78131544 78104606 78131544 - ENST00000258930.7@CIB2 ENST00000258930.7 protein_coding 78131165,78123705,78111165,78109235,78105739,78104606 78131544,78123739,78111276,78109382,78105934,78105332 Gene ID= ENSG00000136425.12 TPM= 28.98 Transcript Type= protein_coding chr15 78104649 78131548 78104649 78131548 - transcript2154.chr15.nic@CIB2 transcript2154.chr15.nic protein_coding 78131165,78123705,78111165,78109235,78104649 78131548,78123739,78111276,78109382,78105934 Gene ID= ENSG00000136425.12 TPM= 1.81 Transcript Type= NA chr15 78104649 78131374 78104649 78131374 - transcript2158.chr15.nic@CIB2 transcript2158.chr15.nic protein_coding 78131165,78123705,78109235,78104649 78131374,78123739,78109382,78105934 Gene ID= ENSG00000136425.12 TPM= 2.72 Transcript Type= NA chr15 78149321 78171949 78149321 78171949 + ENST00000299518.6@IDH3A ENST00000299518.6 protein_coding 78149321,78155213,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922 78149430,78155275,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78171949 Gene ID= ENSG00000166411.13 TPM= 150.47 Transcript Type= protein_coding chr15 78149678 78171937 78149678 78171937 + transcript2169.chr15.nnic@IDH3A transcript2169.chr15.nnic protein_coding 78149678,78155213,78157548,78160092,78161581,78162234,78163507,78163716,78164992,78166150,78168922 78149942,78155275,78157631,78160206,78161768,78162367,78163609,78163780,78165076,78166302,78171937 Gene ID= ENSG00000166411.13 TPM= 9.21 Transcript Type= NA chr15 78264086 78282196 78264086 78282196 + ENST00000394855.7@DNAJA4 ENST00000394855.7 protein_coding 78264086,78264757,78270497,78273095,78274197,78275498,78280045,78280245 78264393,78264895,78270677,78273199,78274424,78275728,78280145,78282196 Gene ID= ENSG00000140403.12 TPM= 2.26 Transcript Type= protein_coding chr15 78264574 78282192 78264574 78282192 + ENST00000394852.7@DNAJA4 ENST00000394852.7 protein_coding 78264574,78270497,78273095,78274197,78275498,78280045,78280245 78264895,78270677,78273199,78274424,78275728,78280145,78282192 Gene ID= ENSG00000140403.12 TPM= 30.34 Transcript Type= protein_coding chr15 78283235 78299605 78283235 78299605 - ENST00000558311.5@WDR61 ENST00000558311.5 protein_coding 78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235 78299605,78295793,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521 Gene ID= ENSG00000140395.8 TPM= 1.81 Transcript Type= protein_coding chr15 78283235 78299643 78283235 78299643 - transcript2179.chr15.nic@WDR61 transcript2179.chr15.nic protein_coding 78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235 78299643,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285724,78283521 Gene ID= ENSG00000140395.8 TPM= 2.72 Transcript Type= NA chr15 78283235 78299592 78283235 78299592 - transcript2181.chr15.nic@WDR61 transcript2181.chr15.nic protein_coding 78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78285261,78283235 78299592,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78283521 Gene ID= ENSG00000140395.8 TPM= 1.81 Transcript Type= NA chr15 78283235 78299794 78283235 78299794 - ENST00000267973.6@WDR61 ENST00000267973.6 protein_coding 78299562,78295675,78294946,78293167,78292616,78289951,78289619,78288289,78286041,78285261,78283235 78299794,78295725,78294973,78293272,78292788,78290099,78289712,78288382,78286133,78285339,78283521 Gene ID= ENSG00000140395.8 TPM= 59.77 Transcript Type= protein_coding chr15 78438124 78488867 78438124 78488867 + transcript2190.chr15.nic@IREB2 transcript2190.chr15.nic protein_coding 78438124,78439795,78462922,78465251,78466271,78470532,78471741,78473242,78476188,78478297,78483318,78484761,78485705,78487733,78488180 78438356,78439881,78463087,78465388,78466489,78470601,78471924,78473381,78476359,78478397,78483434,78484920,78485840,78487817,78488867 Gene ID= ENSG00000136381.12 TPM= 2.26 Transcript Type= NA chr15 78438124 78475059 78438124 78475059 + transcript2192.chr15.nic@IREB2 transcript2192.chr15.nic protein_coding 78438124,78439795,78462922,78465251,78466271,78470532,78471741 78438356,78439881,78463087,78465388,78466489,78470601,78475059 Gene ID= ENSG00000136381.12 TPM= 2.26 Transcript Type= NA chr15 78438189 78501456 78438189 78501456 + ENST00000258886.12@IREB2 ENST00000258886.12 protein_coding 78438189,78439795,78462922,78465251,78466271,78470532,78471741,78473242,78476188,78478297,78483318,78484761,78485705,78487733,78488180,78488647,78490422,78490619,78493909,78494142,78497126,78498033 78438356,78439881,78463087,78465388,78466489,78470601,78471924,78473381,78476359,78478397,78483434,78484920,78485840,78487817,78488336,78488771,78490526,78490761,78494056,78494264,78497311,78501456 Gene ID= ENSG00000136381.12 TPM= 21.73 Transcript Type= protein_coding chr15 78507564 78537372 78507564 78537372 + ENST00000408962.6@HYKK ENST00000408962.6 protein_coding 78507564,78513084,78514968,78527380,78537300 78507671,78513425,78515107,78527563,78537372 Gene ID= ENSG00000188266.13 TPM= 2.72 Transcript Type= protein_coding chr15 78540413 78552419 78540413 78552419 + ENST00000044462.11@PSMA4 ENST00000044462.11 protein_coding 78540413,78541905,78542177,78542483,78544190,78544869,78545634,78546575,78548790 78540539,78541930,78542219,78542645,78544267,78544957,78545764,78546698,78552419 Gene ID= ENSG00000041357.15 TPM= 75.16 Transcript Type= protein_coding chr15 78759203 78811431 78759203 78811431 - ENST00000388820.4@ADAMTS7 ENST00000388820.4 protein_coding 78811121,78800192,78797948,78796590,78791140,78790670,78789689,78788231,78777444,78776749,78776188,78774624,78774167,78773083,78771585,78771162,78768133,78767379,78765645,78764555,78763926,78763699,78762403,78759203 78811431,78800547,78798113,78796786,78791223,78790794,78789838,78788374,78777588,78776841,78776333,78774793,78774300,78773203,78771829,78771303,78768259,78767592,78767051,78764707,78764099,78763845,78762565,78759578 Gene ID= ENSG00000136378.14 TPM= 8.15 Transcript Type= protein_coding chr15 78872776 78897733 78872776 78897733 + ENST00000426013.6@MORF4L1 ENST00000426013.6 protein_coding 78872776,78878213,78880512,78886141,78887269,78890989,78891484,78892212,78893539,78894058,78894820,78896983 78873057,78878259,78880579,78886227,78887349,78891014,78891572,78892313,78893627,78894230,78894904,78897733 Gene ID= ENSG00000185787.14 TPM= 374.44 Transcript Type= protein_coding chr15 78921750 78945057 78921750 78945057 - transcript2223.chr15.nic@CTSH transcript2223.chr15.nic protein_coding 78944891,78939140,78937686,78937318,78935680,78934978,78932372,78931451,78929412,78927713,78925334,78922993,78921750 78945057,78939171,78937823,78937423,78935750,78935082,78932458,78931506,78929493,78927781,78925440,78923118,78922205 Gene ID= ENSG00000103811.15 TPM= 6.34 Transcript Type= NA chr15 79311062 79322847 79311062 79322847 + ENST00000299705.9@TMED3 ENST00000299705.9 protein_coding 79311062,79313757,79321978 79311417,79314005,79322847 Gene ID= ENSG00000166557.12 TPM= 95.08 Transcript Type= protein_coding chr15 79845049 79897075 79845049 79897075 - transcript2240.chr15.nnic@MTHFS transcript2240.chr15.nnic protein_coding 79896872,79889093,79846712,79845049 79897075,79889354,79846856,79845442 Gene ID= ENSG00000136371.10 TPM= 2.04 Transcript Type= NA chr15 79844978 79897055 79844978 79897055 - transcript2242.chr15.nic@MTHFS transcript2242.chr15.nic protein_coding 79896791,79889093,79844978 79897055,79889354,79845442 Gene ID= ENSG00000136371.10 TPM= 11.09 Transcript Type= NA chr15 79844976 79897379 79844976 79897379 - ENST00000559722.2@MTHFS ENST00000559722.2 protein_coding 79897161,79889093,79844976 79897379,79889354,79845442 Gene ID= ENSG00000136371.10 TPM= 2.04 Transcript Type= protein_coding chr15 79844976 79897049 79844976 79897049 - ENST00000258874.3@MTHFS ENST00000258874.3 protein_coding 79896872,79889093,79844976 79897049,79889354,79845442 Gene ID= ENSG00000136371.10 TPM= 22.87 Transcript Type= protein_coding chr15 79898841 79923692 79898841 79923692 - transcript2245.chr15.nnic@ST20 transcript2245.chr15.nnic protein_coding 79923143,79914588,79907629,79898841 79923692,79914675,79907684,79899125 Gene ID= ENSG00000180953.11 TPM= 1.81 Transcript Type= NA chr15 80059912 80138379 80059912 80138379 + transcript2253.chr15.nnic@ZFAND6 transcript2253.chr15.nnic protein_coding 80059912,80098416,80120328,80121712,80122700,80131180,80137480 80059963,80098578,80120498,80121820,80122800,80131293,80138379 Gene ID= ENSG00000086666.18 TPM= 13.36 Transcript Type= NA chr15 80059914 80138379 80059914 80138379 + transcript2259.chr15.nnic@ZFAND6 transcript2259.chr15.nnic protein_coding 80059914,80120328,80121712,80122700,80131180,80137480 80059963,80120498,80121820,80122800,80131293,80138379 Gene ID= ENSG00000086666.18 TPM= 9.81 Transcript Type= NA chr15 80059568 80138393 80059568 80138393 + ENST00000261749.10@ZFAND6 ENST00000261749.10 protein_coding 80059568,80098416,80120328,80121712,80122700,80131180,80137480 80059809,80098578,80120498,80121820,80122800,80131293,80138393 Gene ID= ENSG00000086666.18 TPM= 35.09 Transcript Type= protein_coding chr15 80059714 80138360 80059714 80138360 + ENST00000558494.5@ZFAND6 ENST00000558494.5 protein_coding 80059714,80120328,80121712,80122700,80131180,80137480 80059809,80120498,80121820,80122800,80131293,80138360 Gene ID= ENSG00000086666.18 TPM= 111.83 Transcript Type= protein_coding chr15 80072578 80138360 80072578 80138360 + ENST00000559835.5@ZFAND6 ENST00000559835.5 protein_coding 80072578,80120328,80121712,80122700,80131180,80137480 80072647,80120498,80121820,80122800,80131293,80138360 Gene ID= ENSG00000086666.18 TPM= 7.7 Transcript Type= protein_coding chr15 80072583 80138358 80072583 80138358 + ENST00000559775.5@ZFAND6 ENST00000559775.5 protein_coding 80072583,80098416,80120328,80121712,80122700,80131180,80137480 80072647,80098578,80120498,80121820,80122800,80131293,80138358 Gene ID= ENSG00000086666.18 TPM= 2.19 Transcript Type= protein_coding chr15 80152780 80186946 80152780 80186946 + ENST00000407106.5@FAH ENST00000407106.5 protein_coding 80152780,80153026,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130 80152905,80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186946 Gene ID= ENSG00000103876.11 TPM= 34.18 Transcript Type= protein_coding chr15 80152794 80186343 80152794 80186343 + ENST00000261755.9@FAH ENST00000261755.9 protein_coding 80152794,80153026,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130 80152841,80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186343 Gene ID= ENSG00000103876.11 TPM= 60.45 Transcript Type= protein_coding chr15 80152897 80186340 80152897 80186340 + ENST00000561421.5@FAH ENST00000561421.5 protein_coding 80152897,80158060,80159756,80160410,80162246,80168052,80168264,80172149,80173014,80175016,80177537,80180124,80181042,80186130 80153135,80158170,80159877,80160459,80162336,80168149,80168316,80172248,80173144,80175091,80177583,80180225,80181159,80186340 Gene ID= ENSG00000103876.11 TPM= 37.2 Transcript Type= protein_coding chr15 80695303 80755621 80695303 80755621 + ENST00000258884.4@ABHD17C ENST00000258884.4 protein_coding 80695303,80749513,80754151 80696019,80749692,80755621 Gene ID= ENSG00000136379.11 TPM= 21.73 Transcript Type= protein_coding chr15 80978663 80989807 80978663 80989807 - transcript2282.chr15.nnic@MESD transcript2282.chr15.nnic protein_coding 80989579,80981950,80981638,80978663 80989807,80982182,80981827,80979477 Gene ID= ENSG00000117899.10 TPM= 3.92 Transcript Type= NA chr15 80975747 80989878 80975747 80989878 - ENST00000261758.5@MESD ENST00000261758.5 protein_coding 80989579,80981950,80975747 80989878,80982182,80979477 Gene ID= ENSG00000117899.10 TPM= 90.4 Transcript Type= protein_coding chr15 81296913 81309083 81296913 81309083 + ENST00000394652.6@IL16 ENST00000394652.6 protein_coding 81296913,81299380,81301344,81303549,81305908,81306420,81308605 81297078,81300475,81301512,81303650,81306166,81306545,81309083 Gene ID= ENSG00000172349.17 TPM= 3.62 Transcript Type= protein_coding chr15 82130222 82262740 82130222 82262740 - transcript2291.chr15.nnic@EFL1 transcript2291.chr15.nnic protein_coding 82262614,82261688,82259088,82252691,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151451,82138658,82130222 82262740,82261797,82259155,82252775,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561 Gene ID= ENSG00000140598.13 TPM= 1.81 Transcript Type= NA chr15 82130230 82262763 82130230 82262763 - ENST00000268206.11@EFL1 ENST00000268206.11 protein_coding 82262614,82261688,82259088,82252691,82241270,82240418,82238307,82230848,82229034,82228191,82227450,82225165,82220078,82219652,82214717,82163853,82157713,82151465,82138658,82130230 82262763,82261797,82259155,82252775,82241403,82240555,82238521,82230971,82229110,82228327,82227572,82225264,82220229,82219818,82214855,82163984,82157860,82152423,82138842,82130561 Gene ID= ENSG00000140598.13 TPM= 39.84 Transcript Type= protein_coding chr15 82471482 82513939 82471482 82513939 - transcript2302.chr15.nic@GOLGA2P10 transcript2302.chr15.nic transcribed_unprocessed_pseudogene 82513666,82477838,82477394,82477203,82477033,82476786,82475478,82471482 82513939,82477926,82477582,82477298,82477123,82476940,82475615,82473481 Gene ID= ENSG00000255769.7 TPM= 1.81 Transcript Type= NA chr15 82536753 82540564 82536753 82540564 - ENST00000330244.10@RPS17 ENST00000330244.10 protein_coding 82540426,82539981,82538880,82538306,82536753 82540564,82540132,82538985,82538371,82536881 Gene ID= ENSG00000182774.10 TPM= 407.5 Transcript Type= protein_coding chr15 82536755 82540457 82536755 82540457 - ENST00000560229.5@RPS17 ENST00000560229.5 protein_coding 82539981,82538880,82538306,82536755 82540457,82538985,82538371,82536881 Gene ID= ENSG00000182774.10 TPM= 53.43 Transcript Type= retained_intron chr15 82543202 82647613 82543202 82647613 - transcript2309.chr15.nnic@CPEB1 transcript2309.chr15.nnic protein_coding 82647209,82628364,82627193,82571344,82557760,82555870,82553878,82553467,82552480,82549460,82547143,82546441,82543202 82647613,82628556,82627367,82571532,82557986,82556122,82553991,82553556,82552616,82549658,82547237,82546521,82544702 Gene ID= ENSG00000214575.9 TPM= 3.62 Transcript Type= NA chr15 82750572 82757204 82750572 82757204 + ENST00000561107.5@SNHG21 ENST00000561107.5 antisense_RNA 82750572,82754629,82756730,82756904 82750848,82754784,82756785,82757204 Gene ID= ENSG00000250988.7 TPM= 1.81 Transcript Type= antisense_RNA chr15 82809583 82836105 82809583 82836105 + transcript2320.chr15.nnic@WHAMM transcript2320.chr15.nnic protein_coding 82809583,82813103,82816692,82817920,82819323,82821711,82823100,82826410,82826751,82830599,82833229 82810335,82813276,82816842,82818089,82819488,82821839,82823287,82826496,82826846,82831079,82836105 Gene ID= ENSG00000156232.7 TPM= 3.17 Transcript Type= NA chr15 82809909 82834835 82809909 82834835 + transcript2322.chr15.nnic@WHAMM transcript2322.chr15.nnic protein_coding 82809909,82810572,82813103,82816692,82817920,82819323,82823100,82826410,82826751,82830599,82833229 82810335,82810709,82813276,82816842,82818089,82819488,82823287,82826496,82826846,82831079,82834835 Gene ID= ENSG00000156232.7 TPM= 3.17 Transcript Type= NA chr15 82848978 82952717 82848978 82952717 - transcript2325.chr15.nnic@HOMER2 transcript2325.chr15.nnic protein_coding 82952010,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848978 82952717,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903 Gene ID= ENSG00000103942.12 TPM= 3.62 Transcript Type= NA chr15 82848978 82986118 82848978 82986118 - transcript2327.chr15.nic@HOMER2 transcript2327.chr15.nic protein_coding 82985787,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848978 82986118,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903 Gene ID= ENSG00000103942.12 TPM= 1.81 Transcript Type= NA chr15 82848978 82986180 82848978 82986180 - transcript2329.chr15.nic@HOMER2 transcript2329.chr15.nic protein_coding 82986080,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848978 82986180,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903 Gene ID= ENSG00000103942.12 TPM= 2.72 Transcript Type= NA chr15 82848983 82952721 82848983 82952721 - ENST00000450735.6@HOMER2 ENST00000450735.6 protein_coding 82952531,82892685,82875273,82864167,82859029,82854644,82852142,82851151,82848983 82952721,82892841,82875404,82864259,82859135,82854800,82852252,82851231,82849903 Gene ID= ENSG00000103942.12 TPM= 14.49 Transcript Type= protein_coding chr15 82986207 82991057 82986207 82991057 + ENST00000304191.3@FAM103A1 ENST00000304191.3 protein_coding 82986207,82987336,82989010,82989881 82986369,82987384,82989188,82991057 Gene ID= ENSG00000169612.3 TPM= 38.03 Transcript Type= protein_coding chr15 82994342 83011638 82994342 83011638 - transcript2335.chr15.nnic@C15orf40 transcript2335.chr15.nnic protein_coding 83011497,83010237,83008548,82994342 83011638,83010363,83008675,82995384 Gene ID= ENSG00000169609.13 TPM= 3.62 Transcript Type= NA chr15 83001355 83011638 83001355 83011638 - transcript2337.chr15.nnic@C15orf40 transcript2337.chr15.nnic protein_coding 83011497,83010237,83008548,83001355 83011638,83010363,83008586,83005692 Gene ID= ENSG00000169609.13 TPM= 2.72 Transcript Type= NA chr15 83003143 83011636 83003143 83011636 - transcript2338.chr15.nic@C15orf40 transcript2338.chr15.nic protein_coding 83011486,83010237,83008548,83003143 83011636,83010363,83008675,83005692 Gene ID= ENSG00000169609.13 TPM= 4.53 Transcript Type= NA chr15 83016422 83067252 83016422 83067252 - transcript2342.chr15.nic@BTBD1 transcript2342.chr15.nic protein_coding 83066751,83056389,83050073,83041728,83030136,83028616,83020675,83018707,83016422 83067252,83056545,83050178,83041925,83030328,83028728,83020762,83018853,83018225 Gene ID= ENSG00000064726.9 TPM= 4.53 Transcript Type= NA chr15 83016422 83067252 83016422 83067252 - transcript2345.chr15.nic@BTBD1 transcript2345.chr15.nic protein_coding 83066751,83056389,83041728,83030136,83020675,83018707,83016422 83067252,83056545,83041925,83030328,83020762,83018853,83018225 Gene ID= ENSG00000064726.9 TPM= 7.24 Transcript Type= NA chr15 83016422 83067354 83016422 83067354 - ENST00000261721.8@BTBD1 ENST00000261721.8 protein_coding 83066751,83056389,83050073,83041728,83030136,83020675,83018707,83016422 83067354,83056545,83050178,83041925,83030328,83020762,83018853,83018225 Gene ID= ENSG00000064726.9 TPM= 149.41 Transcript Type= protein_coding chr15 83107407 83137359 83107407 83137359 + ENST00000322019.13@TM6SF1 ENST00000322019.13 protein_coding 83107407,83112797,83115845,83119578,83121921,83122757,83124672,83126755,83127358,83136481 83107772,83112900,83115942,83119681,83122003,83122878,83124776,83126847,83127477,83137359 Gene ID= ENSG00000136404.15 TPM= 1.81 Transcript Type= protein_coding chr15 83653859 83931364 83653859 83931364 + transcript2363.chr15.nnic@ADAMTSL3 transcript2363.chr15.nnic protein_coding 83653859,83655729,83704389,83773523,83804650,83819811,83838089,83858766,83870802,83885101,83890109,83891329,83892684,83897858,83899647,83913092,83923904,83931117 83654276,83655830,83704508,83773650,83804695,83820047,83838215,83858840,83870959,83885212,83890247,83891379,83892888,83898005,83899731,83913378,83924033,83931364 Gene ID= ENSG00000156218.12 TPM= 4.53 Transcript Type= NA chr15 84198849 84230158 84198849 84230158 - transcript2365.chr15.nic@GOLGA2P7 transcript2365.chr15.nic transcribed_unprocessed_pseudogene 84229852,84205231,84204787,84204600,84204426,84204177,84202870,84198849 84230158,84205319,84204975,84204691,84204516,84204331,84203020,84200876 Gene ID= ENSG00000225151.10 TPM= 1.81 Transcript Type= NA chr15 84507130 84570925 84507130 84570925 - transcript2369.chr15.nnic@GOLGA6L5P transcript2369.chr15.nnic transcribed_unprocessed_pseudogene 84570599,84569505,84554966,84546221,84542145,84538532,84527619,84527380,84526781,84514915,84514233,84513967,84513215,84511734,84511407,84510267,84509729,84507130 84570925,84569683,84555070,84546277,84542284,84538616,84527667,84527477,84526876,84515034,84514292,84514047,84513302,84512833,84511467,84510369,84510056,84509698 Gene ID= ENSG00000230373.8 TPM= 1.81 Transcript Type= NA chr15 84622017 84634170 84622017 84634170 - transcript2402.chr15.nnic@AC048382.5 transcript2402.chr15.nnic antisense_RNA 84633524,84631299,84622017 84634170,84632278,84622732 Gene ID= ENSG00000275120.2 TPM= 1.81 Transcript Type= NA chr15 84622017 84634175 84622017 84634175 - transcript2404.chr15.nnic@AC048382.5 transcript2404.chr15.nnic antisense_RNA 84633524,84631299,84622017 84634175,84632278,84623535 Gene ID= ENSG00000275120.2 TPM= 3.62 Transcript Type= NA chr15 84601005 84623716 84601005 84623716 + ENST00000448803.6@ZSCAN2 ENST00000448803.6 protein_coding 84601005,84603820,84620602 84601188,84604333,84623716 Gene ID= ENSG00000176371.13 TPM= 4.53 Transcript Type= protein_coding chr15 84601050 84616614 84601050 84616614 + ENST00000379358.7@ZSCAN2 ENST00000379358.7 protein_coding 84601050,84603820,84616309 84601135,84604333,84616614 Gene ID= ENSG00000176371.13 TPM= 1.81 Transcript Type= protein_coding chr15 84601050 84622394 84601050 84622394 + ENST00000327179.6@ZSCAN2 ENST00000327179.6 protein_coding 84601050,84603820,84620602 84601135,84604330,84622394 Gene ID= ENSG00000176371.13 TPM= 1.81 Transcript Type= protein_coding chr15 84639281 84654335 84639281 84654335 - ENST00000434634.6@WDR73 ENST00000434634.6 protein_coding 84654234,84653632,84652714,84648537,84647890,84646184,84645471,84639281 84654335,84653699,84652802,84648625,84647954,84646348,84645836,84643723 Gene ID= ENSG00000177082.12 TPM= 15.39 Transcript Type= protein_coding chr15 84655129 84658548 84655129 84658548 - ENST00000360476.7@NMB ENST00000360476.7 protein_coding 84657996,84657176,84655129 84658548,84657348,84655409 Gene ID= ENSG00000197696.9 TPM= 14.49 Transcript Type= protein_coding chr15 84655129 84658563 84655129 84658563 - ENST00000394588.3@NMB ENST00000394588.3 protein_coding 84657996,84657176,84655129 84658563,84657348,84655404 Gene ID= ENSG00000197696.9 TPM= 11.77 Transcript Type= protein_coding chr15 84669538 84692435 84669538 84692435 - transcript2412.chr15.nic@SEC11A transcript2412.chr15.nic protein_coding 84691970,84691535,84687625,84680713,84670725,84669538 84692435,84691644,84687774,84680832,84670782,84670069 Gene ID= ENSG00000140612.13 TPM= 4.53 Transcript Type= NA chr15 84669538 84716460 84669538 84716460 - ENST00000559729.5@SEC11A ENST00000559729.5 protein_coding 84716025,84691535,84680713,84670725,84669538 84716460,84691644,84680832,84670782,84670069 Gene ID= ENSG00000140612.13 TPM= 1.81 Transcript Type= protein_coding chr15 84669545 84716063 84669545 84716063 - ENST00000558217.5@SEC11A ENST00000558217.5 protein_coding 84716025,84691535,84687625,84670725,84669545 84716063,84691644,84687774,84670782,84670069 Gene ID= ENSG00000140612.13 TPM= 2.72 Transcript Type= protein_coding chr15 84981430 85139146 84981430 85139146 + transcript2425.chr15.nnic@PDE8A transcript2425.chr15.nnic protein_coding 84981430,84981974,85064370,85067014,85075862,85076733,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797 84981813,84982348,85064426,85067204,85075918,85076787,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85139146 Gene ID= ENSG00000073417.14 TPM= 14.49 Transcript Type= NA chr15 84981441 85139146 84981441 85139146 + transcript2433.chr15.nnic@PDE8A transcript2433.chr15.nnic protein_coding 84981441,85064370,85075862,85076733,85083556,85089338,85091044,85097948,85100015,85100156,85109053,85113377,85113873,85115439,85115984,85117641,85120797,85123061,85126207,85136534,85137797 84982348,85064426,85075918,85076787,85083644,85089416,85091181,85098036,85100066,85100198,85109130,85113447,85114037,85115487,85116119,85117839,85121014,85123193,85126374,85136663,85139146 Gene ID= ENSG00000073417.14 TPM= 4.53 Transcript Type= NA chr15 85689925 85749357 85689925 85749357 + transcript2445.chr15.nic@AKAP13 transcript2445.chr15.nic protein_coding 85689925,85693277,85708019,85710579,85715788,85717290,85718007,85719076,85721991,85722230,85723072,85726410,85727066,85727381,85730513,85734992,85735560,85736090,85740222,85741046,85743492,85744628 85690104,85693451,85708086,85710645,85715923,85717402,85718159,85719326,85722116,85722347,85723320,85726486,85727247,85727463,85730707,85735150,85735630,85736134,85740272,85741495,85743825,85749357 Gene ID= ENSG00000170776.21 TPM= 13.58 Transcript Type= NA chr15 85759323 85795030 85759323 85795030 - ENST00000337975.5@KLHL25 ENST00000337975.5 protein_coding 85794766,85768017,85759323 85795030,85769820,85761011 Gene ID= ENSG00000183655.12 TPM= 16.3 Transcript Type= protein_coding chr15 88459476 88467419 88459476 88467419 - ENST00000312475.4@MRPL46 ENST00000312475.4 protein_coding 88467150,88465587,88464703,88459476 88467419,88465773,88464876,88459863 Gene ID= ENSG00000259494.1 TPM= 80.59 Transcript Type= protein_coding chr15 88467453 88480773 88467453 88480773 + ENST00000325844.8@MRPS11 ENST00000325844.8 protein_coding 88467453,88467908,88472627,88475110,88476989,88477872 88467782,88468024,88472725,88475239,88477054,88480773 Gene ID= ENSG00000181991.15 TPM= 58.86 Transcript Type= protein_coding chr15 88512483 88546653 88512483 88546653 - ENST00000564406.5@DET1 ENST00000564406.5 protein_coding 88546540,88536312,88530623,88527599,88516782,88512483 88546653,88536381,88531715,88527786,88516973,88513140 Gene ID= ENSG00000140543.14 TPM= 4.53 Transcript Type= protein_coding chr15 88512483 88546675 88512483 88546675 - ENST00000268148.12@DET1 ENST00000268148.12 protein_coding 88546540,88530623,88527599,88516782,88512483 88546675,88531715,88527786,88516973,88513140 Gene ID= ENSG00000140543.14 TPM= 8.15 Transcript Type= protein_coding chr15 88621296 88632282 88621296 88632282 + ENST00000332810.3@AEN ENST00000332810.3 protein_coding 88621296,88626146,88629226,88630058 88621382,88626749,88629426,88632282 Gene ID= ENSG00000181026.14 TPM= 56.14 Transcript Type= protein_coding chr15 88638743 88656483 88638743 88656483 + ENST00000306072.9@ISG20 ENST00000306072.9 protein_coding 88638743,88639343,88652110,88655415 88639076,88639594,88652310,88656483 Gene ID= ENSG00000172183.14 TPM= 8.15 Transcript Type= protein_coding chr15 88877293 88895545 88877293 88895545 - transcript2471.chr15.nic@HAPLN3 transcript2471.chr15.nic protein_coding 88895459,88887175,88879418,88878967,88877293 88895545,88887345,88881725,88879269,88878256 Gene ID= ENSG00000140511.11 TPM= 1.81 Transcript Type= NA chr15 88877288 88895626 88877288 88895626 - ENST00000359595.7@HAPLN3 ENST00000359595.7 protein_coding 88895459,88887175,88881357,88878967,88877288 88895626,88887345,88881725,88879269,88878256 Gene ID= ENSG00000140511.11 TPM= 4.53 Transcript Type= protein_coding chr15 88877293 88913378 88877293 88913378 - transcript2464.chr15.nnic@MFGE8 transcript2464.chr15.nnic protein_coding 88913247,88909792,88907195,88906626,88905757,88901551,88887175,88881357,88879418,88878967,88877293 88913378,88909923,88907376,88906778,88905901,88901735,88887345,88881725,88880610,88879269,88878256 Gene ID= ENSG00000140545.14 TPM= 1.81 Transcript Type= NA chr15 88898713 88913381 88898713 88913381 - ENST00000268151.11@MFGE8 ENST00000268151.11 protein_coding 88913247,88909792,88907195,88906626,88905757,88901551,88898713 88913381,88909923,88907376,88906778,88905901,88901735,88899532 Gene ID= ENSG00000140545.14 TPM= 1.81 Transcript Type= protein_coding chr15 88898714 88913411 88898714 88913411 - ENST00000268150.12@MFGE8 ENST00000268150.12 protein_coding 88913247,88909792,88907195,88906626,88905757,88901551,88899656,88898714 88913411,88909923,88907376,88906778,88905901,88901735,88899811,88899532 Gene ID= ENSG00000140545.14 TPM= 65.2 Transcript Type= protein_coding chr15 89088480 89202332 89088480 89202332 + transcript2473.chr15.nic@ABHD2 transcript2473.chr15.nic protein_coding 89088480,89102500,89103903,89104182,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227 89088563,89102576,89104044,89104270,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89202332 Gene ID= ENSG00000140526.17 TPM= 12.38 Transcript Type= NA chr15 89088493 89202332 89088493 89202332 + transcript2474.chr15.nic@ABHD2 transcript2474.chr15.nic protein_coding 89088493,89103903,89104182,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227 89088563,89104044,89104270,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89202332 Gene ID= ENSG00000140526.17 TPM= 13.28 Transcript Type= NA chr15 89088150 89202360 89088150 89202360 + ENST00000352732.9@ABHD2 ENST00000352732.9 protein_coding 89088150,89113725,89116322,89151677,89155367,89175812,89185424,89188193,89191080,89193235,89195227 89088563,89113824,89116521,89151852,89155534,89175995,89185516,89188303,89191149,89193319,89202360 Gene ID= ENSG00000140526.17 TPM= 79.39 Transcript Type= protein_coding chr15 89243993 89317131 89243993 89317131 + transcript2479.chr15.nic@FANCI transcript2479.chr15.nic protein_coding 89243993,89247629,89258704,89260713,89261585,89261821,89263419,89263903,89264522,89268399,89273377,89274168,89276711,89278687,89281170,89281765,89283136,89285096,89290213,89291613,89292688,89292942,89293833,89294915,89299800,89300300,89301326,89303864,89305115,89305341,89305605,89306007,89307476,89307613,89312904,89314612,89315282,89316397 89244067,89247731,89258776,89260843,89261741,89261878,89263460,89264026,89264607,89268525,89273469,89274304,89276891,89278774,89281300,89281835,89283250,89285218,89290281,89291714,89292864,89293063,89293997,89295094,89299966,89300385,89301442,89303915,89305242,89305409,89305698,89306194,89307529,89307672,89312972,89314707,89315389,89317131 Gene ID= ENSG00000140525.17 TPM= 4.07 Transcript Type= NA chr15 89243967 89317129 89243967 89317129 + ENST00000310775.11@FANCI ENST00000310775.11 protein_coding 89243967,89247629,89258704,89260713,89261585,89261821,89263419,89263903,89264522,89268399,89273377,89274168,89276711,89278687,89281170,89281765,89283136,89285096,89290213,89291613,89292688,89292942,89293833,89294915,89299800,89300300,89301326,89303864,89305115,89305341,89305605,89306007,89307476,89307613,89312904,89314612,89315282,89316397 89244033,89247731,89258776,89260843,89261741,89261878,89263460,89264026,89264607,89268525,89273469,89274304,89276891,89278774,89281300,89281835,89283250,89285218,89290281,89291714,89292864,89293063,89293997,89295094,89299966,89300385,89301442,89303915,89305242,89305409,89305698,89306194,89307529,89307672,89312972,89314707,89315389,89317129 Gene ID= ENSG00000140525.17 TPM= 3.17 Transcript Type= protein_coding chr15 89316304 89334855 89316304 89334855 - transcript2484.chr15.nic@POLG transcript2484.chr15.nic protein_coding 89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317939,89317376,89316304 89334855,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89318037,89317536,89316827 Gene ID= ENSG00000140521.12 TPM= 7.24 Transcript Type= NA chr15 89316320 89334861 89316320 89334861 - ENST00000442287.6@POLG ENST00000442287.6 protein_coding 89334685,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316320 89334861,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827 Gene ID= ENSG00000140521.12 TPM= 36.22 Transcript Type= protein_coding chr15 89316305 89334847 89316305 89334847 - ENST00000268124.9@POLG ENST00000268124.9 protein_coding 89334673,89333096,89330081,89328943,89328685,89328456,89327167,89326912,89326612,89325450,89324107,89323815,89323404,89322742,89321962,89321736,89321125,89320766,89319228,89318931,89318541,89317376,89316305 89334847,89333913,89330276,89329110,89328831,89328535,89327349,89327063,89326738,89325686,89324227,89323901,89323511,89322902,89322015,89321853,89321260,89321012,89319350,89319099,89318749,89317536,89316827 Gene ID= ENSG00000140521.12 TPM= 23.54 Transcript Type= protein_coding chr15 89627977 89655451 89627977 89655451 - ENST00000394412.7@KIF7 ENST00000394412.7 protein_coding 89655399,89652603,89649741,89648974,89648255,89647596,89646830,89645893,89645336,89645013,89642203,89633686,89633141,89632820,89631495,89630287,89629375,89628976,89627977 89655451,89652954,89649941,89649367,89648774,89647712,89647057,89646026,89645451,89645165,89642405,89633883,89633266,89632996,89631710,89630493,89629573,89629122,89628786 Gene ID= ENSG00000166813.14 TPM= 9.06 Transcript Type= protein_coding chr15 89681531 89690782 89681531 89690782 - ENST00000300056.7@PEX11A ENST00000300056.7 protein_coding 89690577,89686431,89681531 89690782,89686546,89683948 Gene ID= ENSG00000166821.8 TPM= 16.3 Transcript Type= protein_coding chr15 89748661 89751310 89748661 89751310 - ENST00000300057.4@MESP1 ENST00000300057.4 protein_coding 89750509,89748661 89751310,89750227 Gene ID= ENSG00000166823.5 TPM= 10.87 Transcript Type= protein_coding chr15 89784896 89814969 89784896 89814969 - transcript2516.chr15.nnic@ANPEP transcript2516.chr15.nnic protein_coding 89814772,89805970,89805321,89805078,89804491,89804253,89803889,89803647,89803442,89803239,89801435,89801111,89799426,89799260,89797575,89793035,89792452,89792160,89790953,89790460,89784896 89814969,89806809,89805463,89805217,89804617,89804407,89804002,89803790,89803507,89803304,89801607,89801187,89799559,89799315,89797722,89793126,89792562,89792327,89791093,89790541,89785501 Gene ID= ENSG00000166825.13 TPM= 3.62 Transcript Type= NA chr15 89784889 89814862 89784889 89814862 - ENST00000300060.6@ANPEP ENST00000300060.6 protein_coding 89814772,89805970,89805321,89805078,89804491,89804253,89803889,89803647,89803442,89803239,89801435,89801111,89799426,89799260,89797575,89793035,89792452,89792160,89790953,89790460,89784889 89814862,89806806,89805463,89805217,89804617,89804407,89804002,89803790,89803507,89803304,89801607,89801187,89799559,89799315,89797722,89793126,89792562,89792327,89791093,89790541,89785501 Gene ID= ENSG00000166825.13 TPM= 7.24 Transcript Type= protein_coding chr15 89830599 89894342 89830599 89894342 - ENST00000336418.8@AP3S2 ENST00000336418.8 protein_coding 89893881,89889049,89888521,89871475,89837615,89830599 89894342,89889140,89888632,89871546,89837722,89835643 Gene ID= ENSG00000157823.16 TPM= 97.8 Transcript Type= protein_coding chr15 89834308 89912882 89834308 89912882 - ENST00000398333.7@C15orf38-AP3S2 ENST00000398333.7 protein_coding 89912744,89910744,89908280,89903777,89903216,89889049,89888521,89871475,89837615,89834308 89912882,89910819,89908412,89903983,89903379,89889140,89888632,89871546,89837722,89835643 Gene ID= ENSG00000250021.7 TPM= 5.43 Transcript Type= protein_coding chr15 90001378 90074543 90001378 90074543 + transcript2528.chr15.nic@ZNF710 transcript2528.chr15.nic protein_coding 90001378,90067110,90073071,90074116 90001614,90068595,90073262,90074543 Gene ID= ENSG00000140548.9 TPM= 3.62 Transcript Type= NA chr15 90001392 90082200 90001392 90082200 + ENST00000268154.8@ZNF710 ENST00000268154.8 protein_coding 90001392,90067110,90073071,90074116,90079660 90001614,90068595,90073262,90074290,90082200 Gene ID= ENSG00000140548.9 TPM= 8.15 Transcript Type= protein_coding chr15 90083045 90102504 90083045 90102504 - ENST00000330062.7@IDH2 ENST00000330062.7 protein_coding 90102276,90091553,90090479,90088587,90088359,90087439,90087112,90085275,90085001,90084816,90083045 90102504,90091644,90090644,90088747,90088502,90087575,90087263,90085387,90085098,90084908,90084353 Gene ID= ENSG00000182054.9 TPM= 36.22 Transcript Type= protein_coding chr15 90184963 90229670 90184963 90229670 + ENST00000332496.10@SEMA4B ENST00000332496.10 protein_coding 90184963,90201458,90217439,90217767,90219793,90220982,90221367,90221614,90223559,90223838,90224968,90225282,90225661,90227557,90227904 90185081,90201735,90217602,90217829,90219891,90221093,90221480,90221765,90223740,90223988,90225178,90225397,90225827,90227642,90229670 Gene ID= ENSG00000185033.14 TPM= 193.2 Transcript Type= protein_coding chr15 90201319 90229676 90201319 90229676 + ENST00000411539.6@SEMA4B ENST00000411539.6 protein_coding 90201319,90217439,90217767,90219793,90220982,90221367,90221614,90223559,90223838,90224968,90225282,90225661,90227557,90227904 90201735,90217602,90217829,90219891,90221093,90221480,90221765,90223740,90223988,90225178,90225397,90225827,90227642,90229676 Gene ID= ENSG00000185033.14 TPM= 23.86 Transcript Type= protein_coding chr15 90229975 90234047 90229975 90234047 - ENST00000328649.10@CIB1 ENST00000328649.10 protein_coding 90233835,90233669,90232219,90231357,90231095,90230934,90229975 90234047,90233703,90232327,90231507,90231213,90231022,90230505 Gene ID= ENSG00000185043.10 TPM= 283.25 Transcript Type= protein_coding chr15 90230246 90233959 90230246 90233959 - transcript2553.chr15.nic@CIB1 transcript2553.chr15.nic protein_coding 90233835,90232219,90231357,90231095,90230934,90230246 90233959,90233703,90231507,90231213,90231022,90230505 Gene ID= ENSG00000185043.10 TPM= 15.21 Transcript Type= NA chr15 90265659 90273231 90265659 90273231 + ENST00000331497.3@NGRN ENST00000331497.3 protein_coding 90265659,90271188 90266398,90273231 Gene ID= ENSG00000182768.8 TPM= 251.74 Transcript Type= processed_transcript chr15 90352245 90362847 90352245 90362847 + ENST00000354377.7@ZNF774 ENST00000354377.7 protein_coding 90352245,90354642,90358851,90360043 90352411,90354764,90358957,90362847 Gene ID= ENSG00000196391.10 TPM= 2.72 Transcript Type= protein_coding chr15 90388218 90502243 90388218 90502243 + ENST00000268182.9@IQGAP1 ENST00000268182.9 protein_coding 90388218,90390774,90426110,90429589,90433719,90439332,90440502,90441506,90443394,90448573,90449559,90452775,90453132,90454428,90456152,90466001,90466269,90467450,90472840,90473715,90473896,90474064,90474485,90476663,90477067,90477665,90481960,90482197,90483361,90484220,90486030,90486954,90487495,90491333,90492545,90494713,90497232,90499995 90388396,90390873,90426266,90429666,90433795,90439399,90440615,90441684,90443478,90448736,90449643,90452938,90453292,90454552,90456315,90466091,90466436,90467592,90473010,90473798,90473967,90474133,90474693,90476818,90477230,90477889,90482100,90482281,90483593,90484352,90486132,90487089,90487582,90491545,90492711,90494835,90497340,90502243 Gene ID= ENSG00000140575.12 TPM= 79.69 Transcript Type= protein_coding chr15 90529892 90594334 90529892 90594334 + transcript2586.chr15.nic@CRTC3 transcript2586.chr15.nic protein_coding 90529892,90540039,90593636 90530203,90540137,90594334 Gene ID= ENSG00000140577.15 TPM= 3.62 Transcript Type= NA chr15 90871539 90883458 90871539 90883458 + ENST00000610579.4@FURIN ENST00000610579.4 protein_coding 90871539,90875582,90876255,90876462,90876896,90877135,90877527,90878132,90878764,90879444,90879671,90879867,90880094,90880691,90880930,90881286 90871605,90875917,90876353,90876557,90877024,90877211,90877615,90878304,90878976,90879544,90879774,90879984,90880273,90880815,90881040,90883458 Gene ID= ENSG00000140564.11 TPM= 91.46 Transcript Type= protein_coding chr15 90884469 90895775 90884469 90895775 + transcript2598.chr15.nic@FES transcript2598.chr15.nic protein_coding 90884469,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416 90884639,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895775 Gene ID= ENSG00000182511.11 TPM= 8.39 Transcript Type= NA chr15 90884412 90895776 90884412 90895776 + ENST00000328850.7@FES ENST00000328850.7 protein_coding 90884412,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416 90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895776 Gene ID= ENSG00000182511.11 TPM= 23.79 Transcript Type= protein_coding chr15 90884446 90895775 90884446 90895775 + transcript2600.chr15.nnic@FES transcript2600.chr15.nnic protein_coding 90884446,90885037,90885412,90886830,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893291,90893654,90893936,90895416 90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90893194,90893414,90893811,90894058,90895775 Gene ID= ENSG00000182511.11 TPM= 2.35 Transcript Type= NA chr15 90884369 90895775 90884369 90895775 + transcript2602.chr15.nic@FES transcript2602.chr15.nic protein_coding 90884369,90885037,90885412,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416 90884544,90885258,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895775 Gene ID= ENSG00000182511.11 TPM= 5.07 Transcript Type= NA chr15 90884504 90895775 90884504 90895775 + transcript2606.chr15.nic@FES transcript2606.chr15.nic protein_coding 90884504,90885037,90886961,90887187,90889306,90889517,90889840,90890092,90890401,90890982,90891554,90892058,90892707,90893100,90893291,90893654,90893936,90895416 90884544,90885585,90887057,90887370,90889443,90889636,90889962,90890278,90890484,90891191,90891676,90892111,90892825,90893194,90893414,90893811,90894058,90895775 Gene ID= ENSG00000182511.11 TPM= 3.87 Transcript Type= NA chr15 90902645 90922578 90902645 90922578 + transcript2611.chr15.nnic@MAN2A2 transcript2611.chr15.nnic protein_coding 90902645,90903231,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90911385,90912043,90912542,90912877,90913273,90913614,90916123,90918194,90918645,90919635 90902975,90903432,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911238,90911550,90912279,90912664,90912991,90913406,90913755,90916256,90918388,90918755,90922578 Gene ID= ENSG00000196547.14 TPM= 12.22 Transcript Type= NA chr15 90902729 90922578 90902729 90922578 + transcript2614.chr15.nic@MAN2A2 transcript2614.chr15.nic protein_coding 90902729,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90911385,90912043,90912542,90912877,90913273,90913614,90916123,90918194,90918645,90919635 90902975,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911238,90911550,90912279,90912664,90912991,90913406,90913755,90916256,90918388,90918755,90922578 Gene ID= ENSG00000196547.14 TPM= 14.04 Transcript Type= NA chr15 90902869 90922578 90902869 90922578 + transcript2616.chr15.nic@MAN2A2 transcript2616.chr15.nic protein_coding 90902869,90904190,90905251,90905579,90905845,90906370,90906740,90907309,90909327,90910090,90910501,90910847,90911171,90912043,90912877,90913273,90913614,90916123,90918194,90918645,90919635 90903432,90904339,90905508,90905723,90906016,90906497,90906913,90907495,90909504,90910292,90910683,90910961,90911550,90912664,90912991,90913406,90913755,90916256,90918388,90918755,90922578 Gene ID= ENSG00000196547.14 TPM= 9.96 Transcript Type= NA chr15 90930919 90935194 90930919 90935194 - transcript2642.chr15.nnic@HDDC3 transcript2642.chr15.nnic protein_coding 90934985,90932055,90931704,90930919 90935194,90932110,90931944,90931405 Gene ID= ENSG00000184508.10 TPM= 2.11 Transcript Type= NA chr15 90929964 90932569 90929964 90932569 - ENST00000394272.7@HDDC3 ENST00000394272.7 protein_coding 90932429,90932055,90931704,90929964 90932569,90932110,90931944,90931405 Gene ID= ENSG00000184508.10 TPM= 25.65 Transcript Type= protein_coding chr15 90930925 90932552 90930925 90932552 - ENST00000494993.1@HDDC3 ENST00000494993.1 protein_coding 90932055,90931704,90930925 90932552,90931944,90931405 Gene ID= ENSG00000184508.10 TPM= 3.02 Transcript Type= retained_intron chr15 90930925 90932546 90930925 90932546 - ENST00000330334.7@HDDC3 ENST00000330334.7 protein_coding 90932429,90932055,90931704,90930925 90932546,90932110,90931944,90931556 Gene ID= ENSG00000184508.10 TPM= 1.81 Transcript Type= protein_coding chr15 90930180 90954093 90930180 90954093 + ENST00000394275.6@UNC45A ENST00000394275.6 protein_coding 90930180,90933977,90934339,90934944,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459 90930255,90934143,90934549,90935330,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093 Gene ID= ENSG00000140553.17 TPM= 114.71 Transcript Type= protein_coding chr15 90935285 90954093 90935285 90954093 + ENST00000418476.2@UNC45A ENST00000418476.2 protein_coding 90935285,90935544,90935946,90936285,90939731,90940306,90942437,90942912,90944892,90946614,90947796,90948142,90948654,90949316,90949654,90950154,90950500,90952929,90953155,90953459 90935375,90935705,90935982,90936460,90939823,90940473,90942605,90943082,90945063,90946914,90947890,90948283,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093 Gene ID= ENSG00000140553.17 TPM= 84.82 Transcript Type= protein_coding chr15 90947237 90954093 90947237 90954093 + ENST00000487875.5@UNC45A ENST00000487875.5 protein_coding 90947237,90948142,90949316,90949654,90950154,90950500,90952929,90953155,90953459 90947890,90948794,90949443,90949720,90950267,90950615,90953046,90953310,90954093 Gene ID= ENSG00000140553.17 TPM= 1.51 Transcript Type= retained_intron chr15 90954851 90963123 90954851 90963123 + transcript2644.chr15.nic@RCCD1 transcript2644.chr15.nic protein_coding 90954851,90955800,90956612,90957113,90957604,90959900,90960328,90961025,90961618 90954948,90955883,90956900,90957503,90957725,90959998,90960498,90961054,90963123 Gene ID= ENSG00000166965.12 TPM= 19.92 Transcript Type= NA chr15 90998419 91022617 90998419 91022617 - transcript2659.chr15.nnic@VPS33B transcript2659.chr15.nnic protein_coding 91022154,91017805,91016963,91014384,91013804,91009785,91007870,91007469,91006950,91006652,91006372,91005973,91005694,91005380,91005055,91004877,91003085,91002050,91001389,91000490,90999900,90999677,90998419 91022617,91017885,91017024,91014433,91013871,91009846,91007964,91007573,91007046,91006729,91006445,91006059,91005784,91005454,91005119,91004931,91003131,91002182,91001462,91000591,90999975,90999793,90999054 Gene ID= ENSG00000184056.14 TPM= 2.72 Transcript Type= NA chr15 90998416 91022603 90998416 91022603 - ENST00000333371.7@VPS33B ENST00000333371.7 protein_coding 91022154,91017805,91016963,91014384,91013804,91009801,91007870,91007469,91006950,91006652,91006372,91005973,91005694,91005380,91005055,91004877,91003085,91002050,91001389,91000490,90999900,90999677,90998416 91022603,91017885,91017024,91014433,91013871,91009846,91007964,91007573,91007046,91006729,91006445,91006059,91005784,91005454,91005119,91004931,91003131,91002182,91001462,91000591,90999975,90999793,90999054 Gene ID= ENSG00000184056.14 TPM= 14.49 Transcript Type= protein_coding chr15 91258263 91295407 91258263 91295407 + transcript2665.chr15.nic@SV2B transcript2665.chr15.nic protein_coding 91258263,91260320,91266582,91267555,91268441,91281728,91284021,91289521,91292369 91258554,91260409,91266692,91267643,91268605,91281861,91284221,91289680,91295407 Gene ID= ENSG00000185518.11 TPM= 3.62 Transcript Type= NA chr15 91853700 92163544 91853700 92163544 + transcript2668.chr15.nnic@SLCO3A1 transcript2668.chr15.nnic protein_coding 91853700,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756,92163296 91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92162998,92163544 Gene ID= ENSG00000176463.13 TPM= 4.53 Transcript Type= NA chr15 91853101 92172435 91853101 92172435 + transcript2671.chr15.nic@SLCO3A1 transcript2671.chr15.nic protein_coding 91853101,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92171780 91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92172435 Gene ID= ENSG00000176463.13 TPM= 2.26 Transcript Type= NA chr15 91853695 92165903 91853695 92165903 + ENST00000318445.10@SLCO3A1 ENST00000318445.10 protein_coding 91853695,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756 91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92165903 Gene ID= ENSG00000176463.13 TPM= 37.13 Transcript Type= protein_coding chr15 91853856 92172435 91853856 92172435 + ENST00000424469.2@SLCO3A1 ENST00000424469.2 protein_coding 91853856,91915993,92094881,92104279,92120465,92126061,92128351,92146984,92150950,92162756,92171780 91854088,91916458,92094979,92104542,92120629,92126259,92128489,92147159,92151014,92162998,92172435 Gene ID= ENSG00000176463.13 TPM= 2.26 Transcript Type= protein_coding chr15 92617451 92734213 92617451 92734213 - transcript2676.chr15.nnic@FAM174B transcript2676.chr15.nnic protein_coding 92733985,92699040,92630214,92617451 92734213,92699163,92630345,92619459 Gene ID= ENSG00000185442.12 TPM= 2.26 Transcript Type= NA chr15 92617443 92655958 92617443 92655958 - ENST00000327355.5@FAM174B ENST00000327355.5 protein_coding 92655316,92630214,92617443 92655958,92630345,92619459 Gene ID= ENSG00000185442.12 TPM= 6.79 Transcript Type= protein_coding chr15 92882691 92898084 92882691 92898084 + transcript2685.chr15.nic@LINC01578 transcript2685.chr15.nic processed_transcript 92882691,92883585,92885515,92886169,92892004,92897724 92883186,92883778,92885584,92886254,92892072,92898084 Gene ID= ENSG00000272888.5 TPM= 17.66 Transcript Type= NA chr15 92883300 92898748 92883300 92898748 + transcript2688.chr15.nic@AC013394.1 transcript2688.chr15.nic protein_coding 92883300,92885515,92886169,92892004,92897724 92883543,92885584,92886254,92892072,92898748 Gene ID= ENSG00000279765.3 TPM= 19.47 Transcript Type= NA chr15 92900321 92902402 92900321 92902402 + ENST00000627622.1@CHD2 ENST00000627622.1 protein_coding 92900321,92901167 92900824,92902402 Gene ID= ENSG00000173575.20 TPM= 10.87 Transcript Type= protein_coding chr15 92904473 92949231 92904473 92949231 + ENST00000626782.2@CHD2 ENST00000626782.2 protein_coding 92904473,92924321,92927244,92929030,92937518,92939578,92941822,92942843,92944415,92945821,92946038,92948952 92905008,92924552,92927330,92929091,92937625,92939718,92941955,92943068,92944515,92945865,92946216,92949231 Gene ID= ENSG00000173575.20 TPM= 2.72 Transcript Type= protein_coding chr15 93043416 93073148 93043416 93073148 - ENST00000542321.6@RGMA ENST00000542321.6 protein_coding 93072916,93051993,93043416 93073148,93052507,93045705 Gene ID= ENSG00000182175.13 TPM= 2.72 Transcript Type= protein_coding chr15 93863057 93867719 93863057 93867719 + transcript2694.chr15.nnic@LINC02207 transcript2694.chr15.nnic lincRNA 93863057,93865374,93867400 93863216,93865648,93867719 Gene ID= ENSG00000258476.5 TPM= 2.72 Transcript Type= NA chr15 97960698 97973838 97960698 97973838 + ENST00000268042.6@ARRDC4 ENST00000268042.6 protein_coding 97960698,97965600,97965895,97968014,97969123,97969883,97970589,97971131 97961168,97965666,97966042,97968116,97969379,97970045,97970743,97973838 Gene ID= ENSG00000140450.8 TPM= 46.18 Transcript Type= protein_coding chr15 98649549 98958340 98649549 98958340 + transcript2719.chr15.nnic@IGF1R transcript2719.chr15.nnic protein_coding 98649549,98707562,98891323,98896755,98899477,98908685,98911315,98913044,98915964,98916672,98922146,98923874,98924525,98929558,98930233,98934824,98935316,98939199,98942921,98948574,98957059,98957963 98649675,98708107,98891637,98896905,98899621,98908899,98911441,98913282,98916131,98916876,98922431,98924012,98924684,98929660,98930305,98935053,98935426,98939360,98943052,98948708,98957476,98958340 Gene ID= ENSG00000140443.13 TPM= 56.14 Transcript Type= NA chr15 98650926 98958905 98650926 98958905 + transcript2726.chr15.nnic@IGF1R transcript2726.chr15.nnic protein_coding 98650926,98707562,98891323,98896755,98899477,98908685,98911315,98913044,98915964,98916672,98922146,98923874,98924525,98929558,98930233,98934824,98935316,98939199,98942921,98948574,98957059 98651081,98708107,98891637,98896905,98899621,98908899,98911441,98913282,98916131,98916876,98922431,98924012,98924684,98929660,98930305,98935053,98935426,98939360,98943052,98948708,98958905 Gene ID= ENSG00000140443.13 TPM= 8.6 Transcript Type= NA chr15 99105035 99135589 99105035 99135589 + ENST00000336292.10@SYNM ENST00000336292.10 protein_coding 99105035,99113591,99126722,99129367 99106009,99113715,99126792,99135589 Gene ID= ENSG00000182253.14 TPM= 14.49 Transcript Type= protein_coding chr15 99105080 99135583 99105080 99135583 + ENST00000594047.2@SYNM ENST00000594047.2 protein_coding 99105080,99113591,99126722,99129367,99132750 99106009,99113715,99126792,99131813,99135583 Gene ID= ENSG00000182253.14 TPM= 11.77 Transcript Type= protein_coding chr15 99136324 99249619 99136324 99249619 - transcript2738.chr15.nic@TTC23 transcript2738.chr15.nic protein_coding 99249171,99245389,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136324 99249619,99245510,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127 Gene ID= ENSG00000103852.12 TPM= 1.81 Transcript Type= NA chr15 99136324 99249610 99136324 99249610 - transcript2739.chr15.nic@TTC23 transcript2739.chr15.nic protein_coding 99249417,99245389,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136324 99249610,99245510,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127 Gene ID= ENSG00000103852.12 TPM= 6.34 Transcript Type= NA chr15 99136324 99249610 99136324 99249610 - transcript2742.chr15.nic@TTC23 transcript2742.chr15.nic protein_coding 99249417,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139137,99136324 99249610,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139266,99138127 Gene ID= ENSG00000103852.12 TPM= 1.81 Transcript Type= NA chr15 99136324 99249610 99136324 99249610 - transcript2744.chr15.nic@TTC23 transcript2744.chr15.nic protein_coding 99249417,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136324 99249610,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127 Gene ID= ENSG00000103852.12 TPM= 5.73 Transcript Type= NA chr15 99136324 99249580 99136324 99249580 - transcript2745.chr15.nic@TTC23 transcript2745.chr15.nic protein_coding 99249417,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99156148,99139317,99136324 99249580,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297,99139399,99138127 Gene ID= ENSG00000103852.12 TPM= 3.02 Transcript Type= NA chr15 99155362 99249466 99155362 99249466 - transcript2748.chr15.nic@TTC23 transcript2748.chr15.nic protein_coding 99249171,99245389,99241365,99228533,99221741,99218898,99218588,99199919,99175050,99161740,99155362 99249466,99245510,99241559,99228732,99221864,99219048,99218713,99200096,99175155,99161867,99156297 Gene ID= ENSG00000103852.12 TPM= 2.72 Transcript Type= NA chr15 99136324 99175189 99136324 99175189 - transcript2754.chr15.nic@TTC23 transcript2754.chr15.nic protein_coding 99175050,99161740,99156148,99139317,99136324 99175189,99161867,99156297,99139399,99138127 Gene ID= ENSG00000103852.12 TPM= 3.92 Transcript Type= NA chr15 99136324 99175189 99136324 99175189 - transcript2755.chr15.nic@TTC23 transcript2755.chr15.nic protein_coding 99175050,99161740,99156148,99139317,99136324 99175189,99161867,99156297,99139467,99138127 Gene ID= ENSG00000103852.12 TPM= 1.81 Transcript Type= NA chr15 99251449 99389526 99251449 99389526 + transcript2757.chr15.nnic@LRRC28 transcript2757.chr15.nnic protein_coding 99251449,99255898,99261678,99276576,99287257,99287814,99333923,99352369,99361336,99363106,99386030 99251541,99256125,99261758,99276616,99287294,99287951,99334129,99352471,99361511,99363265,99389526 Gene ID= ENSG00000168904.14 TPM= 2.17 Transcript Type= NA chr15 99251362 99390729 99251362 99390729 + ENST00000301981.7@LRRC28 ENST00000301981.7 protein_coding 99251362,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99363106,99386030 99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99363265,99390729 Gene ID= ENSG00000168904.14 TPM= 15.3 Transcript Type= protein_coding chr15 99251449 99389526 99251449 99389526 + transcript2764.chr15.nic@LRRC28 transcript2764.chr15.nic protein_coding 99251449,99255898,99276576,99287257,99287814,99334018,99352369,99361336,99363106,99386030 99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99363265,99389526 Gene ID= ENSG00000168904.14 TPM= 2.17 Transcript Type= NA chr15 99251520 99389526 99251520 99389526 + transcript2765.chr15.nic@LRRC28 transcript2765.chr15.nic protein_coding 99251520,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99363106,99386030 99251756,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99363265,99389526 Gene ID= ENSG00000168904.14 TPM= 3.53 Transcript Type= NA chr15 99251449 99389526 99251449 99389526 + transcript2768.chr15.nic@LRRC28 transcript2768.chr15.nic protein_coding 99251449,99255898,99287257,99287814,99333923,99352369,99361336,99363106,99386030 99251541,99256125,99287294,99287951,99334129,99352471,99361511,99363265,99389526 Gene ID= ENSG00000168904.14 TPM= 3.98 Transcript Type= NA chr15 99251505 99386296 99251505 99386296 + ENST00000447360.6@LRRC28 ENST00000447360.6 protein_coding 99251505,99255898,99276576,99287257,99287814,99333923,99352369,99361336,99386030 99251541,99256125,99276616,99287294,99287951,99334129,99352471,99361511,99386296 Gene ID= ENSG00000168904.14 TPM= 1.81 Transcript Type= protein_coding chr15 99566027 99695223 99566027 99695223 + transcript2778.chr15.nnic@MEF2A transcript2778.chr15.nnic protein_coding 99566027,99598430,99632978,99645561,99671323,99674393,99675399,99690241,99694076 99566104,99598511,99633173,99645764,99671454,99674612,99675458,99690428,99695223 Gene ID= ENSG00000068305.17 TPM= 1.81 Transcript Type= NA chr15 99565928 99716422 99565928 99716422 + ENST00000338042.10@MEF2A ENST00000338042.10 protein_coding 99565928,99632978,99645561,99671323,99674393,99675399,99690241,99706729,99710634,99712390 99566104,99633173,99645764,99671454,99674612,99675458,99690428,99706855,99710760,99716422 Gene ID= ENSG00000068305.17 TPM= 7.24 Transcript Type= protein_coding chr15 99726823 99733406 99726823 99733406 - transcript2782.chr15.nic@LYSMD4 transcript2782.chr15.nic protein_coding 99733345,99731718,99726823 99733406,99732007,99729731 Gene ID= ENSG00000183060.15 TPM= 3.92 Transcript Type= NA chr15 99727401 99733444 99727401 99733444 - ENST00000545021.2@LYSMD4 ENST00000545021.2 protein_coding 99733345,99727401 99733444,99729731 Gene ID= ENSG00000183060.15 TPM= 1.2 Transcript Type= protein_coding chr15 99727405 99733339 99727405 99733339 - ENST00000409796.5@LYSMD4 ENST00000409796.5 protein_coding 99733285,99731718,99727405 99733339,99732007,99729731 Gene ID= ENSG00000183060.15 TPM= 4.83 Transcript Type= protein_coding chr15 99806537 99875511 99806537 99875511 + transcript2787.chr15.nnic@AC090825.1 transcript2787.chr15.nnic lincRNA 99806537,99807804,99812973,99839083,99874244 99807324,99808302,99813086,99839134,99875511 Gene ID= ENSG00000259363.5 TPM= 1.81 Transcript Type= NA chr15 100569240 100602192 100569240 100602192 - transcript2791.chr15.nic@LINS1 transcript2791.chr15.nic protein_coding 100602121,100580444,100580263,100574987,100571894,100569240 100602192,100580945,100580352,100575128,100574241,100570117 Gene ID= ENSG00000140471.16 TPM= 2.72 Transcript Type= NA chr15 100602534 100651705 100602534 100651705 + ENST00000332783.11@ASB7 ENST00000332783.11 protein_coding 100602534,100603215,100609707,100612166,100629437,100648323 100603046,100603313,100609828,100612427,100630042,100651705 Gene ID= ENSG00000183475.12 TPM= 5.43 Transcript Type= protein_coding chr15 100879376 100916626 100879376 100916626 + ENST00000329841.9@ALDH1A3 ENST00000329841.9 protein_coding 100879376,100885267,100887572,100892510,100892945,100893954,100895933,100898083,100900575,100905523,100907121,100908408,100914701 100880006,100885371,100887712,100892639,100893006,100894082,100896046,100898185,100900759,100905687,100907278,100908482,100916626 Gene ID= ENSG00000184254.16 TPM= 92.82 Transcript Type= protein_coding chr15 100879875 100916626 100879875 100916626 + ENST00000346623.6@ALDH1A3 ENST00000346623.6 protein_coding 100879875,100885267,100887572,100895933,100898083,100900575,100905523,100907121,100908408,100914701 100880006,100885371,100887712,100896046,100898185,100900759,100905687,100907278,100908482,100916626 Gene ID= ENSG00000184254.16 TPM= 4.07 Transcript Type= protein_coding chr15 101049161 101252016 101049161 101252016 - transcript2806.chr15.nnic@CHSY1 transcript2806.chr15.nnic protein_coding 101251137,101235082,101050634,101049161 101252016,101235577,101050779,101049664 Gene ID= ENSG00000131873.5 TPM= 2.72 Transcript Type= NA chr15 101175728 101252048 101175728 101252048 - transcript2810.chr15.nnic@CHSY1 transcript2810.chr15.nnic protein_coding 101251137,101235082,101187993,101175728 101252048,101235577,101188219,101178980 Gene ID= ENSG00000131873.5 TPM= 7.24 Transcript Type= NA chr15 101175728 101251949 101175728 101251949 - transcript2812.chr15.nnic@CHSY1 transcript2812.chr15.nnic protein_coding 101251137,101235255,101175728 101251949,101235577,101178980 Gene ID= ENSG00000131873.5 TPM= 8.15 Transcript Type= NA chr15 101175723 101251932 101175723 101251932 - ENST00000254190.3@CHSY1 ENST00000254190.3 protein_coding 101251137,101235082,101175723 101251932,101235577,101178980 Gene ID= ENSG00000131873.5 TPM= 92.37 Transcript Type= protein_coding chr15 101272182 101277446 101272182 101277446 - ENST00000526049.5@SELENOS ENST00000526049.5 protein_coding 101277342,101276541,101275255,101274592,101274420,101272182 101277446,101276675,101275361,101274681,101274495,101272856 Gene ID= ENSG00000131871.14 TPM= 153.94 Transcript Type= protein_coding chr15 101281510 101295251 101281510 101295251 - ENST00000254193.10@SNRPA1 ENST00000254193.10 protein_coding 101295097,101293025,101291962,101287656,101286908,101286214,101285726,101284967,101281510 101295251,101293172,101292040,101287702,101287010,101286293,101285801,101285060,101281782 Gene ID= ENSG00000131876.16 TPM= 13.13 Transcript Type= protein_coding chr15 101281514 101295282 101281514 101295282 - ENST00000558036.5@SNRPA1 ENST00000558036.5 protein_coding 101295097,101293025,101291962,101287656,101285726,101284967,101281514 101295282,101293172,101292040,101287702,101287010,101285060,101281782 Gene ID= ENSG00000131876.16 TPM= 1.81 Transcript Type= retained_intron chr15 101281514 101295204 101281514 101295204 - ENST00000559309.5@SNRPA1 ENST00000559309.5 protein_coding 101295097,101293025,101291962,101287656,101286908,101285726,101284967,101281514 101295204,101293172,101292040,101287702,101287010,101285801,101285060,101281782 Gene ID= ENSG00000131876.16 TPM= 7.7 Transcript Type= nonsense_mediated_decay chr15 101303934 101489744 101303934 101489744 - ENST00000618548.4@PCSK6 ENST00000618548.4 protein_coding 101489374,101443556,101431990,101431320,101429987,101427892,101398404,101393212,101389464,101384322,101382092,101370335,101366196,101331852,101326377,101324850,101322520,101318319,101313376,101307213,101303934 101489744,101443660,101432100,101431463,101430063,101427980,101398576,101393424,101389564,101384425,101382209,101370523,101366332,101332031,101326479,101325046,101322607,101318422,101313505,101307325,101305355 Gene ID= ENSG00000140479.16 TPM= 3.62 Transcript Type= protein_coding chr15 101641846 101652391 101641846 101652391 - ENST00000347970.7@TM2D3 ENST00000347970.7 protein_coding 101652271,101650004,101646725,101645087,101641846 101652391,101650161,101646899,101645162,101642644 Gene ID= ENSG00000184277.12 TPM= 38.03 Transcript Type= protein_coding chr15 101641848 101652367 101641848 101652367 - ENST00000333202.7@TM2D3 ENST00000333202.7 protein_coding 101652271,101651696,101650004,101646725,101645087,101641848 101652367,101651773,101650161,101646899,101645162,101642644 Gene ID= ENSG00000184277.12 TPM= 14.49 Transcript Type= protein_coding chr15 101653598 101724604 101653598 101724604 - ENST00000335968.7@TARSL2 ENST00000335968.7 protein_coding 101724091,101723093,101721126,101714840,101711880,101708793,101705683,101703859,101702239,101701086,101685896,101684075,101675600,101671671,101671486,101661712,101657785,101656922,101653598 101724604,101723164,101721322,101714963,101712001,101708910,101705747,101703937,101702385,101701184,101686062,101684237,101675737,101671748,101671586,101661816,101657857,101657036,101654730 Gene ID= ENSG00000185418.15 TPM= 33.51 Transcript Type= protein_coding chr15 101961603 101966755 101961603 101966755 + ENST00000559884.5@WASH3P ENST00000559884.5 transcribed_unprocessed_pseudogene 101961603,101966070,101966522 101961641,101966223,101966755 Gene ID= ENSG00000185596.16 TPM= 15.39 Transcript Type= processed_transcript chr16 53829 57668 53829 57668 + ENST00000383018.7@SNRNP25 ENST00000383018.7 protein_coding 53829,55459,55777,56539,57086 54058,55549,55882,56613,57668 Gene ID= ENSG00000161981.10 TPM= 35.32 Transcript Type= protein_coding chr16 58058 72666 58058 72666 - transcript8.chr16.nic@RHBDF1 transcript8.chr16.nic protein_coding 72513,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58058 72666,65039,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759 Gene ID= ENSG00000007384.15 TPM= 3.17 Transcript Type= NA chr16 58059 72631 58059 72631 - ENST00000262316.10@RHBDF1 ENST00000262316.10 protein_coding 72513,64899,64699,63587,62973,62775,62538,61798,61585,61385,61120,60439,60216,59732,59419,59249,58974,58059 72631,65039,64829,63800,63182,62897,62695,62052,61696,61459,61281,60539,60279,59826,59494,59349,59127,58759 Gene ID= ENSG00000007384.15 TPM= 30.34 Transcript Type= protein_coding chr16 78257 85842 78257 85842 + ENST00000219431.4@MPG ENST00000219431.4 protein_coding 78257,79139,79425,83052,85401 78333,79331,79700,83256,85842 Gene ID= ENSG00000103152.11 TPM= 5.43 Transcript Type= protein_coding chr16 84265 138649 84265 138649 - transcript17.chr16.nic@NPRL3 transcript17.chr16.nic protein_coding 138150,130522,119126,117301,112622,110525,100372,98145,93219,92596,89713,88698,86668,84265 138649,130591,119255,117375,112775,110606,100509,98301,93325,92725,89902,88890,86870,84595 Gene ID= ENSG00000103148.15 TPM= 3.62 Transcript Type= NA chr16 172847 173710 172847 173710 + ENST00000251595.10@HBA2 ENST00000251595.10 protein_coding 172847,173125,173472 173007,173329,173710 Gene ID= ENSG00000188536.12 TPM= 178.39 Transcript Type= protein_coding chr16 176680 177522 176680 177522 + ENST00000320868.9@HBA1 ENST00000320868.9 protein_coding 176680,176929,177283 176811,177133,177522 Gene ID= ENSG00000206172.8 TPM= 113.19 Transcript Type= protein_coding chr16 188943 229482 188943 229482 - transcript37.chr16.nic@LUC7L transcript37.chr16.nic protein_coding 229279,227242,220649,208601,208078,206004,199062,192927,190541,189968,188943 229482,228402,220747,208664,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 2.04 Transcript Type= NA chr16 188991 229482 188991 229482 - transcript38.chr16.nic@LUC7L transcript38.chr16.nic protein_coding 229279,227242,220649,208601,208078,206004,199062,192927,190541,189931,188991 229482,228402,220747,208664,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 2.04 Transcript Type= NA chr16 188943 229482 188943 229482 - transcript43.chr16.nic@LUC7L transcript43.chr16.nic protein_coding 229279,227242,220649,208078,206004,199062,192927,190541,189968,188943 229482,228402,220747,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 7.47 Transcript Type= NA chr16 188991 229447 188991 229447 - transcript44.chr16.nic@LUC7L transcript44.chr16.nic protein_coding 227242,220649,208601,208078,206004,199062,192927,190541,189931,188991 229447,220747,208664,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 1.81 Transcript Type= NA chr16 188943 229447 188943 229447 - transcript48.chr16.nic@LUC7L transcript48.chr16.nic protein_coding 227242,220649,208078,206004,199062,192927,190541,189968,188943 229447,220747,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 4.07 Transcript Type= NA chr16 189524 229482 189524 229482 - transcript50.chr16.nic@LUC7L transcript50.chr16.nic protein_coding 229279,227242,220649,208078,206004,199062,192927,190541,189524 229482,228402,220747,208188,206147,199238,193015,190570,190135 Gene ID= ENSG00000007392.16 TPM= 2.49 Transcript Type= NA chr16 188969 229450 188969 229450 - ENST00000293872.12@LUC7L ENST00000293872.12 protein_coding 229279,227242,220649,208078,206004,199062,192927,190541,189968,188969 229450,227336,220747,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 5.43 Transcript Type= protein_coding chr16 188971 229463 188971 229463 - ENST00000397783.5@LUC7L ENST00000397783.5 protein_coding 229279,227242,220649,208078,206004,199062,192927,190541,189931,188971 229463,227336,220747,208188,206147,199238,193015,190570,190135,189339 Gene ID= ENSG00000007392.16 TPM= 1.81 Transcript Type= protein_coding chr16 234817 266125 234817 266125 + transcript75.chr16.nic@FAM234A transcript75.chr16.nic protein_coding 234817,249549,254329,259483,259969,261384,262093,262424,263262,263700,264016,264614,264811 234857,249654,254681,259599,260160,261514,262225,262553,263402,263775,264171,264716,266125 Gene ID= ENSG00000167930.15 TPM= 11.31 Transcript Type= NA chr16 268302 276068 268302 276068 - transcript59.chr16.nic@RGS11 transcript59.chr16.nic protein_coding 275849,275402,275283,274214,274043,273760,273475,272863,271540,271399,271202,270984,270744,270523,269503,268302 276068,275498,275333,275082,274101,273836,273556,272931,271569,271460,271315,271099,270831,270661,269585,269383 Gene ID= ENSG00000076344.15 TPM= 3.62 Transcript Type= NA chr16 268302 272279 268302 272279 - transcript96.chr16.nic@RGS11 transcript96.chr16.nic protein_coding 271399,270984,270744,270523,269503,268302 272279,271315,270831,270661,269585,269383 Gene ID= ENSG00000076344.15 TPM= 1.81 Transcript Type= NA chr16 287440 352702 287440 352702 - transcript99.chr16.nic@AXIN1 transcript99.chr16.nic protein_coding 352369,314543,309973,304304,297722,297056,293488,291190,289440,287440 352702,314683,310069,304441,298251,297226,293718,291297,289607,288248 Gene ID= ENSG00000103126.14 TPM= 1.81 Transcript Type= NA chr16 287440 352659 287440 352659 - ENST00000262320.7@AXIN1 ENST00000262320.7 protein_coding 352369,346148,314543,309973,304304,297722,297056,293488,291190,289440,287440 352659,347106,314683,310069,304441,298251,297226,293718,291297,289607,288248 Gene ID= ENSG00000103126.14 TPM= 8.15 Transcript Type= protein_coding chr16 367384 370527 367384 370527 - ENST00000199706.12@MRPL28 ENST00000199706.12 protein_coding 370499,369931,369068,368501,368328,367384 370527,370225,369220,368635,368414,367782 Gene ID= ENSG00000086504.15 TPM= 78.48 Transcript Type= protein_coding chr16 367384 370509 367384 370509 - ENST00000483764.5@MRPL28 ENST00000483764.5 protein_coding 370499,369931,368501,368328,367384 370509,370225,369220,368414,367782 Gene ID= ENSG00000086504.15 TPM= 3.32 Transcript Type= retained_intron chr16 370777 382006 370777 382006 - transcript113.chr16.nic@TMEM8A transcript113.chr16.nic protein_coding 381701,377671,377378,377037,376136,375345,375133,374756,374221,374005,372611,370777 382006,377848,377585,377164,376812,375435,375256,374892,374399,374151,372727,372283 Gene ID= ENSG00000129925.10 TPM= 9.51 Transcript Type= NA chr16 370796 382006 370796 382006 - transcript116.chr16.nic@TMEM8A transcript116.chr16.nic protein_coding 381701,377671,377378,377037,376544,376136,375345,375133,374756,374221,374005,370796 382006,377848,377585,377164,376812,376455,375435,375256,374892,374399,374151,372283 Gene ID= ENSG00000129925.10 TPM= 3.62 Transcript Type= NA chr16 370773 381982 370773 381982 - ENST00000431232.6@TMEM8A ENST00000431232.6 protein_coding 381701,377671,377378,377037,376544,376136,375345,375133,374756,374221,374005,372611,370773 381982,377848,377585,377164,376812,376455,375435,375256,374892,374399,374151,372727,372283 Gene ID= ENSG00000129925.10 TPM= 118.17 Transcript Type= protein_coding chr16 397197 400759 397197 400759 + transcript137.chr16.nic@NME4 transcript137.chr16.nic protein_coding 397197,398208,398990,399379,399627,400219 397313,398385,399123,399480,399739,400759 Gene ID= ENSG00000103202.12 TPM= 31.24 Transcript Type= NA chr16 397209 400759 397209 400759 + ENST00000219479.6@NME4 ENST00000219479.6 protein_coding 397209,398990,399379,399627,400219 397313,399123,399480,399739,400759 Gene ID= ENSG00000103202.12 TPM= 119.98 Transcript Type= protein_coding chr16 397208 400633 397208 400633 + ENST00000460297.1@NME4 ENST00000460297.1 protein_coding 397208,398208,399379,399627,400219 397313,399123,399480,399739,400633 Gene ID= ENSG00000103202.12 TPM= 2.72 Transcript Type= retained_intron chr16 397237 400648 397237 400648 + ENST00000433358.5@NME4 ENST00000433358.5 protein_coding 397237,398990,399379,399627,400109 397313,399123,399480,399739,400648 Gene ID= ENSG00000103202.12 TPM= 2.26 Transcript Type= protein_coding chr16 401826 412487 401826 412487 + ENST00000219481.9@DECR2 ENST00000219481.9 protein_coding 401826,404956,406346,407425,410243,410691,410972,411361,411890 402043,405024,406397,407560,410367,410784,411076,411578,412487 Gene ID= ENSG00000242612.6 TPM= 58.18 Transcript Type= protein_coding chr16 410864 412488 410864 412488 + transcript148.chr16.nic@DECR2 transcript148.chr16.nic protein_coding 410864,411361,411890 411076,411578,412488 Gene ID= ENSG00000242612.6 TPM= 11.77 Transcript Type= NA chr16 425585 497445 425585 497445 + transcript166.chr16.nic@RAB11FIP3 transcript166.chr16.nic protein_coding 425585,461404,471295,482525,488851,491134,496824,497292 426720,461497,471389,482736,489000,491268,496859,497445 Gene ID= ENSG00000090565.15 TPM= 2.72 Transcript Type= NA chr16 425585 497445 425585 497445 + transcript168.chr16.nic@RAB11FIP3 transcript168.chr16.nic protein_coding 425585,461404,471295,482525,488851,496824,497292 426720,461497,471389,482736,489000,496859,497445 Gene ID= ENSG00000090565.15 TPM= 2.72 Transcript Type= NA chr16 425619 523011 425619 523011 + ENST00000262305.8@RAB11FIP3 ENST00000262305.8 protein_coding 425619,461404,471295,482525,488851,496824,503004,505524,510660,518943,519754,520122,520459,520726 426720,461497,471389,482736,489000,496859,503097,505627,510800,519024,519891,520277,520599,523011 Gene ID= ENSG00000090565.15 TPM= 87.39 Transcript Type= protein_coding chr16 527813 554635 527813 554635 + transcript179.chr16.nnic@CAPN15 transcript179.chr16.nnic protein_coding 527813,533946,536029,540093,546817,548993,549288,549615,551302,551512,552051,552301,552605,552863,553339 528029,533998,536142,540371,548287,549201,549471,549838,551427,551664,552212,552530,552771,553041,554635 Gene ID= ENSG00000103326.11 TPM= 5.89 Transcript Type= NA chr16 527709 554635 527709 554635 + transcript182.chr16.nnic@CAPN15 transcript182.chr16.nnic protein_coding 527709,533946,540093,546817,548993,549288,549615,551302,551512,552051,552301,552605,552863,553339 528029,533998,540371,548287,549201,549471,549838,551427,551664,552212,552530,552771,553041,554635 Gene ID= ENSG00000103326.11 TPM= 4.07 Transcript Type= NA chr16 527709 554635 527709 554635 + transcript184.chr16.nic@CAPN15 transcript184.chr16.nic protein_coding 527709,533946,546817,548993,549288,549615,551302,551512,552051,552301,552605,552863,553339 528029,533998,548287,549201,549471,549838,551427,551664,552212,552530,552771,553041,554635 Gene ID= ENSG00000103326.11 TPM= 9.06 Transcript Type= NA chr16 527856 554636 527856 554636 + ENST00000219611.6@CAPN15 ENST00000219611.6 protein_coding 527856,533946,536029,546817,548993,549288,549615,551302,551512,552051,552301,552605,552863,553339 528029,533998,536142,548287,549201,549471,549838,551427,551664,552212,552530,552771,553041,554636 Gene ID= ENSG00000103326.11 TPM= 14.49 Transcript Type= protein_coding chr16 567005 569495 567005 569495 + ENST00000540585.1@NHLRC4 ENST00000540585.1 protein_coding 567005,567496 567075,569495 Gene ID= ENSG00000257108.1 TPM= 7.24 Transcript Type= protein_coding chr16 566996 569487 566996 569487 + ENST00000424439.2@NHLRC4 ENST00000424439.2 protein_coding 566996,567471 567075,569487 Gene ID= ENSG00000257108.1 TPM= 4.53 Transcript Type= protein_coding chr16 569621 584113 569621 584113 + transcript195.chr16.nic@PIGQ transcript195.chr16.nic protein_coding 569621,574066,575839,576134,578379,578785,579069,580183,580858,581199,582248,582883 569795,574763,575970,576254,578505,578938,579180,580263,580972,581341,582309,584113 Gene ID= ENSG00000007541.16 TPM= 5.07 Transcript Type= NA chr16 569939 584113 569939 584113 + transcript197.chr16.nic@PIGQ transcript197.chr16.nic protein_coding 569939,574066,575839,576134,578379,578785,579069,580183,580858,581199,582248,582883 570096,574763,575970,576254,578505,578938,579180,580263,580972,581341,582309,584113 Gene ID= ENSG00000007541.16 TPM= 8.69 Transcript Type= NA chr16 569621 584127 569621 584127 + transcript201.chr16.nic@PIGQ transcript201.chr16.nic protein_coding 569621,574066,575839,576134,578379,578785,579069,580183,580858,582248,582883 569795,574763,575970,576254,578505,578938,579180,580263,580972,582309,584127 Gene ID= ENSG00000007541.16 TPM= 12.77 Transcript Type= NA chr16 569621 584115 569621 584115 + transcript208.chr16.nic@PIGQ transcript208.chr16.nic protein_coding 569621,574066,575839,576134,578379,578785,579069,580183,580858,582883 569795,574763,575970,576254,578505,578938,579180,580263,580972,584115 Gene ID= ENSG00000007541.16 TPM= 4.62 Transcript Type= NA chr16 569925 584120 569925 584120 + transcript213.chr16.nic@PIGQ transcript213.chr16.nic protein_coding 569925,574066,575839,576134,578379,578785,579069,580858,582248,582883 570096,574763,575970,576254,578505,578938,579180,580972,582309,584120 Gene ID= ENSG00000007541.16 TPM= 4.07 Transcript Type= NA chr16 569959 584115 569959 584115 + transcript219.chr16.nic@PIGQ transcript219.chr16.nic protein_coding 569959,574066,575839,576134,578379,578785,579069,580858,582883 570096,574763,575970,576254,578505,578938,579180,580972,584115 Gene ID= ENSG00000007541.16 TPM= 3.62 Transcript Type= NA chr16 569947 584136 569947 584136 + ENST00000321878.9@PIGQ ENST00000321878.9 protein_coding 569947,574066,575839,576134,578379,578785,579069,580183,580858,582248,582883 570096,574763,575970,576254,578505,578938,579180,580263,580972,582309,584136 Gene ID= ENSG00000007541.16 TPM= 68.91 Transcript Type= protein_coding chr16 570018 584109 570018 584109 + ENST00000026218.9@PIGQ ENST00000026218.9 protein_coding 570018,574066,575839,576134,578379,578785,579069,580183,580858,582883 570096,574763,575970,576254,578505,578938,579180,580263,580972,584109 Gene ID= ENSG00000007541.16 TPM= 11.86 Transcript Type= protein_coding chr16 569976 577234 569976 577234 + ENST00000422307.6@PIGQ ENST00000422307.6 protein_coding 569976,574066,575839,576134 570096,574763,575970,577234 Gene ID= ENSG00000007541.16 TPM= 5.43 Transcript Type= protein_coding chr16 581761 584108 581761 584108 + ENST00000476438.1@PIGQ ENST00000476438.1 protein_coding 581761,582883 582309,584108 Gene ID= ENSG00000007541.16 TPM= 8.15 Transcript Type= retained_intron chr16 589357 629271 589357 629271 + ENST00000535977.5@RAB40C ENST00000535977.5 protein_coding 589357,590261,617208,618200,625432,625899,627342 589547,590433,617268,618260,625509,626121,629271 Gene ID= ENSG00000197562.9 TPM= 3.92 Transcript Type= protein_coding chr16 590089 629272 590089 629272 + ENST00000248139.7@RAB40C ENST00000248139.7 protein_coding 590089,617208,618200,625432,625899,627342 590433,617268,618260,625509,626121,629272 Gene ID= ENSG00000197562.9 TPM= 33.8 Transcript Type= protein_coding chr16 590077 629271 590077 629271 + ENST00000538492.5@RAB40C ENST00000538492.5 protein_coding 590077,590261,617208,618200,625432,625899,627342 590119,590433,617268,618260,625509,626121,629271 Gene ID= ENSG00000197562.9 TPM= 12.98 Transcript Type= protein_coding chr16 634430 636371 634430 636371 - transcript241.chr16.nic@METTL26 transcript241.chr16.nic protein_coding 636094,635612,634889,634719,634430 636371,635774,635340,634797,634644 Gene ID= ENSG00000130731.15 TPM= 5.61 Transcript Type= NA chr16 634430 636302 634430 636302 - ENST00000301686.12@METTL26 ENST00000301686.12 protein_coding 636094,635612,635281,634889,634719,634430 636302,635774,635340,634956,634797,634644 Gene ID= ENSG00000130731.15 TPM= 55.42 Transcript Type= protein_coding chr16 634430 636302 634430 636302 - ENST00000397666.6@METTL26 ENST00000397666.6 protein_coding 636094,635612,635281,634719,634430 636302,635774,635340,634797,634644 Gene ID= ENSG00000130731.15 TPM= 22.82 Transcript Type= protein_coding chr16 634438 636351 634438 636351 - ENST00000397664.8@METTL26 ENST00000397664.8 protein_coding 636094,635281,634719,634438 636351,635340,634797,634644 Gene ID= ENSG00000130731.15 TPM= 2.72 Transcript Type= protein_coding chr16 634436 636310 634436 636310 - ENST00000448973.6@METTL26 ENST00000448973.6 protein_coding 634889,634719,634436 636310,634797,634644 Gene ID= ENSG00000130731.15 TPM= 8.15 Transcript Type= retained_intron chr16 634427 636366 634427 636366 - ENST00000614890.4@METTL26 ENST00000614890.4 protein_coding 636094,635612,634889,634719,634427 636366,635774,634956,634797,634644 Gene ID= ENSG00000130731.15 TPM= 1.99 Transcript Type= protein_coding chr16 641929 648474 641929 648474 + transcript254.chr16.nnic@MCRIP2 transcript254.chr16.nnic protein_coding 641929,642120,647417,647783,648120 642043,642249,647544,647849,648474 Gene ID= ENSG00000172366.19 TPM= 3.02 Transcript Type= NA chr16 641846 648474 641846 648474 + ENST00000491999.5@MCRIP2 ENST00000491999.5 protein_coding 641846,642120,646472,647417,647783,648120 642043,642249,646608,647544,647884,648474 Gene ID= ENSG00000172366.19 TPM= 34.71 Transcript Type= nonsense_mediated_decay chr16 641813 648474 641813 648474 + ENST00000307650.8@MCRIP2 ENST00000307650.8 protein_coding 641813,642120,647417,647783,648120 642043,642249,647544,647884,648474 Gene ID= ENSG00000172366.19 TPM= 50.1 Transcript Type= protein_coding chr16 642451 648437 642451 648437 + ENST00000615744.4@MCRIP2 ENST00000615744.4 protein_coding 642451,646472,647417,647783,648120 643144,646608,647544,647884,648437 Gene ID= ENSG00000172366.19 TPM= 7.24 Transcript Type= processed_transcript chr16 652112 667835 652112 667835 + transcript264.chr16.nnic@WDR90 transcript264.chr16.nnic protein_coding 652112,652467,653341,653525,653746,655029,655307,655573,655773,656302,656732,657091,657762,658183,658525,658896,659086,659245,660058,660612,661051,661342,661597,661891,662220,662673,665679,665950,666220,666455,666673,666905,667432 652218,652535,653451,653670,653803,655147,655468,655703,655889,656537,656871,657221,657892,658344,658653,659011,659126,659376,660161,660714,661172,661501,661787,662059,662331,662844,665801,666124,666350,666598,666792,666989,667835 Gene ID= ENSG00000161996.18 TPM= 10.87 Transcript Type= NA chr16 654593 660941 654593 660941 - transcript351.chr16.nnic@AL022341.2 transcript351.chr16.nnic antisense_RNA 659456,658821,658171,657045,656797,654593 660941,659004,658718,657333,656857,655879 Gene ID= ENSG00000262528.2 TPM= 3.02 Transcript Type= NA chr16 654604 660941 654604 660941 - transcript353.chr16.nnic@AL022341.2 transcript353.chr16.nnic antisense_RNA 659456,658821,658171,657045,656797,654604 660941,659004,658718,657333,656857,656528 Gene ID= ENSG00000262528.2 TPM= 3.47 Transcript Type= NA chr16 654595 660043 654595 660043 - transcript358.chr16.nnic@AL022341.2 transcript358.chr16.nnic antisense_RNA 659456,658821,658171,654595 660043,659004,658718,657333 Gene ID= ENSG00000262528.2 TPM= 4.37 Transcript Type= NA chr16 668086 674174 668086 674174 + ENST00000315082.8@RHOT2 ENST00000315082.8 protein_coding 668086,668353,668488,668656,669553,670123,670249,670456,670675,670892,671083,671697,671860,672084,672254,672489,672703,672928,673480 668236,668411,668569,668699,669606,670175,670357,670557,670773,671000,671203,671781,672002,672181,672384,672566,672825,673130,674174 Gene ID= ENSG00000140983.13 TPM= 155.36 Transcript Type= protein_coding chr16 668100 674174 668100 674174 + transcript283.chr16.nic@RHOT2 transcript283.chr16.nic protein_coding 668100,668353,668488,668656,669553,670123,670249,670456,670675,670892,671697,671860,672084,672254,672489,672703,672928,673480 668236,668411,668569,668699,669606,670175,670357,670557,670773,671203,671781,672002,672181,672384,672566,672825,673130,674174 Gene ID= ENSG00000140983.13 TPM= 55.12 Transcript Type= NA chr16 668100 674174 668100 674174 + transcript303.chr16.nic@RHOT2 transcript303.chr16.nic protein_coding 668100,668353,668488,668656,669553,670123,670249,670456,670774,671697,671860,672084,672254,672489,672703,672928,673480 668236,668411,668569,668699,669606,670175,670357,670557,671203,671781,672002,672181,672384,672566,672825,673130,674174 Gene ID= ENSG00000140983.13 TPM= 11.68 Transcript Type= NA chr16 668135 674174 668135 674174 + ENST00000569675.5@RHOT2 ENST00000569675.5 protein_coding 668135,668353,668488,669553,670123,670266,670456,670675,670892,671083,671697,671860,672084,672254,672489,672703,672928,673480 668236,668411,668699,669606,670175,670357,670557,670773,671000,671203,671781,672002,672181,672384,672566,672825,673130,674174 Gene ID= ENSG00000140983.13 TPM= 2.63 Transcript Type= retained_intron chr16 675605 678265 675605 678265 + transcript362.chr16.nic@RHBDL1 transcript362.chr16.nic protein_coding 675605,676336,676672,676971,677276,677459,677639 675829,676497,676896,677119,677388,677559,678265 Gene ID= ENSG00000103269.13 TPM= 1.81 Transcript Type= NA chr16 675676 678270 675676 678270 + transcript363.chr16.nic@RHBDL1 transcript363.chr16.nic protein_coding 675676,676336,676672,676971,677276,677639,677781 675829,676497,676896,677119,677559,677699,678270 Gene ID= ENSG00000103269.13 TPM= 2.72 Transcript Type= NA chr16 675666 678268 675666 678268 + ENST00000352681.7@RHBDL1 ENST00000352681.7 protein_coding 675666,676336,676672,676971,677276,677459,677639,677781 675829,676497,676896,677119,677388,677559,677699,678268 Gene ID= ENSG00000103269.13 TPM= 9.06 Transcript Type= protein_coding chr16 680139 682752 680139 682752 + transcript384.chr16.nic@STUB1 transcript384.chr16.nic protein_coding 680139,681209,681438,681793,682020,682165,682364 680684,681350,681603,681880,682076,682281,682752 Gene ID= ENSG00000103266.10 TPM= 12.72 Transcript Type= NA chr16 680097 682766 680097 682766 + transcript393.chr16.nic@STUB1 transcript393.chr16.nic protein_coding 680097,681152,681438,681793,682165,682364 680684,681350,681603,682076,682281,682766 Gene ID= ENSG00000103266.10 TPM= 12.45 Transcript Type= NA chr16 680419 682717 680419 682717 + ENST00000569248.5@STUB1 ENST00000569248.5 protein_coding 680419,681438,681793,682165,682364 681350,681603,682076,682281,682717 Gene ID= ENSG00000103266.10 TPM= 1.81 Transcript Type= retained_intron chr16 681658 684359 681658 684359 - transcript373.chr16.nic@JMJD8 transcript373.chr16.nic protein_coding 684234,683861,683685,683530,683322,683167,682953,681658 684359,684155,683781,683598,683441,683234,683087,682874 Gene ID= ENSG00000161999.11 TPM= 26.93 Transcript Type= NA chr16 681699 684344 681699 684344 - ENST00000568689.5@JMJD8 ENST00000568689.5 protein_coding 684234,684066,683861,683685,683322,683167,682958,681699 684344,684155,683909,683781,683598,683234,683087,682874 Gene ID= ENSG00000161999.11 TPM= 13.85 Transcript Type= retained_intron chr16 684622 690400 684622 690400 - ENST00000293883.8@WDR24 ENST00000293883.8 protein_coding 689160,687562,686744,686068,685869,685679,685257,684992,684622 690400,687739,687416,686186,685990,685783,685597,685176,684902 Gene ID= ENSG00000127580.15 TPM= 95.99 Transcript Type= protein_coding chr16 692498 695532 692498 695532 - ENST00000562648.2@FBXL16 ENST00000562648.2 protein_coding 694992,694634,692498 695532,694697,694423 Gene ID= ENSG00000127585.11 TPM= 2.72 Transcript Type= retained_intron chr16 715098 719796 715098 719796 + transcript402.chr16.nnic@METRN transcript402.chr16.nnic protein_coding 715098,715584,715862,716933,717071,718019 715393,715681,715984,716992,717470,719796 Gene ID= ENSG00000103260.8 TPM= 7.24 Transcript Type= NA chr16 715115 719655 715115 719655 + ENST00000568223.6@METRN ENST00000568223.6 protein_coding 715115,715584,716933,717071 715393,715984,716992,719655 Gene ID= ENSG00000103260.8 TPM= 78.78 Transcript Type= protein_coding chr16 721142 722573 721142 722573 + ENST00000219535.7@FAM173A ENST00000219535.7 protein_coding 721142,721598,721801,722309 721436,721702,721941,722573 Gene ID= ENSG00000103254.9 TPM= 3.62 Transcript Type= protein_coding chr16 729757 741012 729757 741012 - transcript424.chr16.nic@NARFL transcript424.chr16.nic protein_coding 740920,739643,737186,736266,734737,733298,732301,731565,730843,729757 741012,739738,737329,736398,734871,734347,732373,731702,731000,730655 Gene ID= ENSG00000103245.13 TPM= 4.68 Transcript Type= NA chr16 729757 741012 729757 741012 - transcript425.chr16.nnic@NARFL transcript425.chr16.nnic protein_coding 740920,739643,737186,736266,734737,734229,733298,732301,730843,729757 741012,739738,737329,736398,734871,734347,733427,732373,731000,730655 Gene ID= ENSG00000103245.13 TPM= 2.42 Transcript Type= NA chr16 729753 741002 729753 741002 - ENST00000251588.6@NARFL ENST00000251588.6 protein_coding 740920,739643,737186,736266,734737,734229,733298,732301,731565,730843,729753 741002,739738,737329,736398,734871,734347,733427,732373,731702,731000,730655 Gene ID= ENSG00000103245.13 TPM= 62.64 Transcript Type= protein_coding chr16 784974 788383 784974 788383 - ENST00000007264.6@RPUSD1 ENST00000007264.6 protein_coding 788256,787556,787354,787077,786827,784974 788383,787744,787477,787179,786928,786377 Gene ID= ENSG00000007376.7 TPM= 36.22 Transcript Type= protein_coding chr16 784991 788371 784991 788371 - ENST00000565809.5@RPUSD1 ENST00000565809.5 protein_coding 788256,787556,787354,786827,784991 788371,787744,787477,786928,786377 Gene ID= ENSG00000007376.7 TPM= 3.62 Transcript Type= protein_coding chr16 788609 798073 788609 798073 + transcript435.chr16.nic@CHTF18 transcript435.chr16.nic protein_coding 788609,788931,789210,789547,790177,790347,790525,791851,792224,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839 788775,789125,789360,789715,790269,790399,791370,791948,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798073 Gene ID= ENSG00000127586.16 TPM= 2.26 Transcript Type= NA chr16 788609 798073 788609 798073 + transcript437.chr16.nic@CHTF18 transcript437.chr16.nic protein_coding 788609,788931,789210,789547,790177,790347,790525,791161,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839 788775,789125,789360,789715,790269,790399,790666,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798073 Gene ID= ENSG00000127586.16 TPM= 6.79 Transcript Type= NA chr16 788609 798073 788609 798073 + transcript442.chr16.nic@CHTF18 transcript442.chr16.nic protein_coding 788609,788931,789210,789547,790177,790347,790525,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839 788775,789125,789360,789715,790269,790399,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798073 Gene ID= ENSG00000127586.16 TPM= 6.79 Transcript Type= NA chr16 788622 798074 788622 798074 + ENST00000262315.13@CHTF18 ENST00000262315.13 protein_coding 788622,788931,789210,789547,790177,790347,790525,791161,791851,792224,792439,792718,792966,793144,794054,795132,795685,795947,796717,796961,797694,797839 788775,789125,789360,789715,790269,790399,790666,791370,791948,792347,792590,792811,793064,793274,794201,795356,795834,796077,796861,797092,797751,798074 Gene ID= ENSG00000127586.16 TPM= 7.7 Transcript Type= protein_coding chr16 854487 970874 854487 970874 - transcript452.chr16.nnic@LMF1 transcript452.chr16.nnic protein_coding 970788,954357,934244,910931,893007,881337,879570,871161,870729,869883,868944,854487 970874,954666,934254,911079,893072,881505,879737,871341,870882,870066,869056,854706 Gene ID= ENSG00000103227.18 TPM= 2.42 Transcript Type= NA chr16 853619 971026 853619 971026 - transcript453.chr16.nic@LMF1 transcript453.chr16.nic protein_coding 970788,954357,934244,933991,910931,893007,879570,871161,870729,869883,868944,853619 971026,954666,934254,934145,911079,893072,879737,871341,870882,870066,869056,854706 Gene ID= ENSG00000103227.18 TPM= 4.23 Transcript Type= NA chr16 853619 971026 853619 971026 - transcript456.chr16.nnic@LMF1 transcript456.chr16.nnic protein_coding 970788,954357,934244,910931,893007,879570,871161,870729,869963,868944,853619 971026,954666,934254,911079,893072,879737,871341,870882,870066,869056,854706 Gene ID= ENSG00000103227.18 TPM= 3.62 Transcript Type= NA chr16 853634 970999 853634 970999 - ENST00000262301.15@LMF1 ENST00000262301.15 protein_coding 970788,954357,934244,910931,893007,879570,871161,870729,869883,868944,853634 970999,954666,934254,911079,893072,879737,871341,870882,870066,869056,854706 Gene ID= ENSG00000103227.18 TPM= 59.47 Transcript Type= protein_coding chr16 975761 981383 975761 981383 - transcript463.chr16.nic@AC009041.2 transcript463.chr16.nic lincRNA 979601,979025,975761 981383,979110,977093 Gene ID= ENSG00000260807.6 TPM= 2.72 Transcript Type= NA chr16 1064084 1078659 1064084 1078659 - transcript469.chr16.nnic@SSTR5-AS1 transcript469.chr16.nnic processed_transcript 1078458,1077624,1066919,1064084 1078659,1077712,1067030,1066526 Gene ID= ENSG00000261713.6 TPM= 1.81 Transcript Type= NA chr16 1064084 1078683 1064084 1078683 - transcript474.chr16.nnic@SSTR5-AS1 transcript474.chr16.nnic processed_transcript 1078458,1077624,1064084 1078683,1077712,1066526 Gene ID= ENSG00000261713.6 TPM= 9.96 Transcript Type= NA chr16 1064093 1078673 1064093 1078673 - ENST00000569832.5@SSTR5-AS1 ENST00000569832.5 processed_transcript 1078458,1077624,1066919,1064093 1078673,1077712,1067043,1066526 Gene ID= ENSG00000261713.6 TPM= 19.92 Transcript Type= lincRNA chr16 1153121 1221772 1153121 1221772 + ENST00000348261.10@CACNA1H ENST00000348261.10 protein_coding 1153121,1153720,1194972,1195432,1195926,1198615,1200256,1200716,1201663,1204010,1205114,1206104,1207001,1207275,1207770,1208013,1209032,1210035,1210370,1210583,1210787,1211168,1211481,1211716,1211946,1212511,1213780,1214972,1215242,1215523,1216932,1217919,1218210,1218970,1219981 1153470,1154036,1195083,1195565,1196023,1198774,1200571,1200808,1202452,1204458,1205265,1206289,1207118,1207430,1207860,1208221,1209412,1210135,1210493,1210651,1210971,1211294,1211606,1211805,1212138,1212528,1213931,1215081,1215375,1215593,1217010,1218040,1218651,1219130,1221772 Gene ID= ENSG00000196557.12 TPM= 25.36 Transcript Type= protein_coding chr16 1228336 1230184 1228336 1230184 - ENST00000606293.5@TPSB2 ENST00000606293.5 protein_coding 1230162,1229891,1229566,1229191,1228900,1228336 1230184,1229951,1229737,1229456,1229063,1228814 Gene ID= ENSG00000197253.13 TPM= 1.81 Transcript Type= protein_coding chr16 1309153 1327018 1309153 1327018 + ENST00000325437.9@UBE2I ENST00000325437.9 protein_coding 1309153,1314020,1314293,1315654,1320174,1320438,1324730 1309271,1314096,1314376,1315726,1320283,1320517,1327018 Gene ID= ENSG00000103275.19 TPM= 3.85 Transcript Type= protein_coding chr16 1309510 1327017 1309510 1327017 + ENST00000397514.7@UBE2I ENST00000397514.7 protein_coding 1309510,1314020,1314293,1315654,1320174,1320438,1324730 1309773,1314096,1314376,1315726,1320283,1320517,1327017 Gene ID= ENSG00000103275.19 TPM= 122.93 Transcript Type= protein_coding chr16 1309636 1317125 1309636 1317125 + ENST00000473256.6@UBE2I ENST00000473256.6 protein_coding 1309636,1314020,1314293,1315654 1309773,1314096,1314376,1317125 Gene ID= ENSG00000103275.19 TPM= 1.36 Transcript Type= retained_intron chr16 1309635 1327018 1309635 1327018 + ENST00000397515.6@UBE2I ENST00000397515.6 protein_coding 1309635,1312347,1314020,1314293,1315654,1320174,1320438,1324730 1309773,1312603,1314096,1314376,1315726,1320283,1320517,1327018 Gene ID= ENSG00000103275.19 TPM= 5.66 Transcript Type= protein_coding chr16 1343371 1349438 1343371 1349438 + transcript493.chr16.nic@BAIAP3 transcript493.chr16.nic protein_coding 1343371,1344022,1344227,1344469,1344601,1344798,1344969,1345249,1345747,1345986,1346170,1346442,1346605,1346847,1347298,1347545,1347701,1347894,1348096,1348379 1343513,1344146,1344317,1344525,1344698,1344849,1345099,1345372,1345890,1346078,1346361,1346510,1346684,1346955,1347369,1347625,1347821,1348017,1348301,1349438 Gene ID= ENSG00000007516.13 TPM= 4.53 Transcript Type= NA chr16 1349240 1351911 1349240 1351911 - ENST00000007390.2@TSR3 ENST00000007390.2 protein_coding 1351693,1351379,1350807,1350058,1349889,1349240 1351911,1351598,1351000,1350234,1349952,1349608 Gene ID= ENSG00000007520.3 TPM= 142.17 Transcript Type= protein_coding chr16 1349238 1351913 1349238 1351913 - transcript544.chr16.nic@TSR3 transcript544.chr16.nic protein_coding 1351693,1351379,1350058,1349889,1349238 1351913,1351598,1351000,1349952,1349608 Gene ID= ENSG00000007520.3 TPM= 9.96 Transcript Type= NA chr16 1363205 1414714 1363205 1414714 - transcript495.chr16.nnic@UNKL transcript495.chr16.nnic protein_coding 1414615,1413846,1403168,1401568,1399374,1397351,1397178,1394131,1392891,1390632,1385208,1371519,1370130,1367656,1367092,1366018,1363205 1414714,1414055,1403344,1401701,1399509,1397382,1397263,1394215,1392976,1390694,1385385,1371611,1370357,1367858,1367349,1366395,1364255 Gene ID= ENSG00000059145.18 TPM= 2.72 Transcript Type= NA chr16 1363204 1379092 1363204 1379092 - transcript534.chr16.nnic@UNKL transcript534.chr16.nnic protein_coding 1378914,1371519,1370130,1367656,1367092,1363204 1379092,1371611,1370357,1367812,1367349,1366395 Gene ID= ENSG00000059145.18 TPM= 3.62 Transcript Type= NA chr16 1363204 1379683 1363204 1379683 - transcript536.chr16.nic@UNKL transcript536.chr16.nic protein_coding 1379533,1371519,1370130,1367656,1367092,1363204 1379683,1371611,1370357,1367858,1367349,1366395 Gene ID= ENSG00000059145.18 TPM= 5.43 Transcript Type= NA chr16 1419744 1420800 1419744 1420800 - ENST00000442039.2@C16orf91 ENST00000442039.2 protein_coding 1420692,1419744 1420800,1420612 Gene ID= ENSG00000174109.4 TPM= 36.22 Transcript Type= protein_coding chr16 1444935 1475580 1444935 1475580 - ENST00000382745.8@CLCN7 ENST00000382745.8 protein_coding 1474834,1465267,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444935 1475580,1465338,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717 Gene ID= ENSG00000103249.17 TPM= 335.55 Transcript Type= protein_coding chr16 1444936 1475084 1444936 1475084 - ENST00000448525.5@CLCN7 ENST00000448525.5 protein_coding 1474834,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1450497,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444936 1475084,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449327,1449093,1448766,1448484,1447714,1447568,1447086,1446717 Gene ID= ENSG00000103249.17 TPM= 16.64 Transcript Type= protein_coding chr16 1444934 1475076 1444934 1475076 - transcript571.chr16.nic@CLCN7 transcript571.chr16.nic protein_coding 1474834,1465267,1461603,1461405,1460816,1460418,1459107,1457694,1457254,1456113,1455731,1455134,1454411,1453834,1452755,1451623,1449276,1448966,1448681,1448355,1447655,1447392,1447006,1444934 1475076,1465338,1461674,1461470,1460948,1460527,1459187,1457756,1457337,1456206,1455795,1455250,1454465,1453894,1452893,1451716,1450666,1449093,1448766,1448484,1447714,1447568,1447086,1446717 Gene ID= ENSG00000103249.17 TPM= 15.03 Transcript Type= NA chr16 1493347 1510458 1493347 1510458 + transcript594.chr16.nic@TELO2 transcript594.chr16.nic protein_coding 1493347,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506484,1507306,1507601,1509830 1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510458 Gene ID= ENSG00000100726.14 TPM= 4.07 Transcript Type= NA chr16 1493352 1510458 1493352 1510458 + transcript599.chr16.nic@TELO2 transcript599.chr16.nic protein_coding 1493352,1494281,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830 1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510458 Gene ID= ENSG00000100726.14 TPM= 17.21 Transcript Type= NA chr16 1493363 1510457 1493363 1510457 + ENST00000262319.10@TELO2 ENST00000262319.10 protein_coding 1493363,1494246,1495346,1497036,1497361,1499231,1500096,1500347,1500563,1501420,1501663,1502047,1502313,1502645,1502931,1505410,1506238,1506952,1507306,1507601,1509830 1493605,1494616,1495623,1497104,1497508,1499333,1500164,1500488,1500699,1501499,1501773,1502135,1502404,1502761,1503002,1505601,1506329,1507051,1507370,1507716,1510457 Gene ID= ENSG00000100726.14 TPM= 105.04 Transcript Type= protein_coding chr16 1510427 1612110 1510427 1612110 - ENST00000426508.6@IFT140 ENST00000426508.6 protein_coding 1611968,1610664,1607120,1602370,1592467,1592176,1589605,1587933,1587198,1586130,1584217,1583314,1580759,1571407,1568217,1566161,1563997,1561985,1557935,1526619,1525887,1525231,1524784,1524552,1523828,1523518,1520602,1520131,1519881,1518216,1510427 1612110,1610853,1607297,1602591,1592588,1592318,1589780,1588024,1587304,1586275,1584420,1583386,1580850,1571534,1568334,1566291,1564162,1562116,1558134,1526796,1526077,1525326,1524916,1524695,1523956,1523700,1520808,1520343,1520047,1518357,1511150 Gene ID= ENSG00000187535.13 TPM= 26.87 Transcript Type= protein_coding chr16 1510428 1610670 1510428 1610670 - transcript586.chr16.nnic@IFT140 transcript586.chr16.nnic protein_coding 1609401,1607120,1602370,1592467,1592176,1589605,1587933,1587198,1586130,1584217,1583314,1580759,1571407,1568217,1566161,1563997,1561985,1557935,1526619,1525887,1525231,1524784,1524552,1523828,1523518,1520602,1520131,1519881,1518216,1510428 1610670,1607297,1602591,1592588,1592318,1589780,1588024,1587304,1586275,1584420,1583386,1580850,1571534,1568334,1566291,1564162,1562116,1558134,1526796,1526077,1525326,1524916,1524695,1523956,1523700,1520808,1520343,1520047,1518357,1511150 Gene ID= ENSG00000187535.13 TPM= 10.57 Transcript Type= NA chr16 1510428 1610669 1510428 1610669 - transcript587.chr16.nic@IFT140 transcript587.chr16.nic protein_coding 1610417,1607120,1602370,1592467,1592176,1589605,1587933,1587198,1586130,1584217,1583314,1580759,1571407,1568217,1566161,1563997,1561985,1557935,1526619,1525887,1525231,1524784,1524552,1523828,1523518,1520602,1520131,1519881,1518216,1510428 1610669,1607297,1602591,1592588,1592318,1589780,1588024,1587304,1586275,1584420,1583386,1580850,1571534,1568334,1566291,1564162,1562116,1558134,1526796,1526077,1525326,1524916,1524695,1523956,1523700,1520808,1520343,1520047,1518357,1511150 Gene ID= ENSG00000187535.13 TPM= 11.47 Transcript Type= NA chr16 1533573 1555580 1533573 1555580 + ENST00000566264.1@TMEM204 ENST00000566264.1 protein_coding 1533573,1541921,1554782 1534555,1542076,1555580 Gene ID= ENSG00000131634.13 TPM= 61.58 Transcript Type= protein_coding chr16 1678256 1702086 1678256 1702086 + ENST00000248098.7@JPT2 ENST00000248098.7 protein_coding 1678256,1685439,1691843,1697812,1698811 1678356,1685587,1691985,1697860,1702086 Gene ID= ENSG00000206053.12 TPM= 34.41 Transcript Type= protein_coding chr16 1706203 1770339 1706203 1770339 + transcript623.chr16.nnic@MAPK8IP3 transcript623.chr16.nnic protein_coding 1706203,1724557,1729138,1729487,1743335,1744978,1747029,1748244,1748602,1758148,1758978,1759958,1760380,1761224,1762351,1762675,1762836,1763657,1764115,1764301,1765013,1765960,1766220,1766529,1766723,1766904,1767149,1767564,1767805,1768069,1768199,1768477,1768703 1706657,1724677,1729208,1729578,1743476,1745103,1747275,1748346,1748720,1758159,1758995,1760015,1760532,1761305,1762481,1762731,1763006,1763783,1764210,1764459,1765178,1766142,1766409,1766648,1766803,1766971,1767297,1767735,1767918,1768107,1768378,1768626,1770339 Gene ID= ENSG00000138834.12 TPM= 12.68 Transcript Type= NA chr16 1706203 1770339 1706203 1770339 + transcript624.chr16.nic@MAPK8IP3 transcript624.chr16.nic protein_coding 1706203,1724557,1729138,1729487,1743332,1747029,1748244,1748602,1758148,1758978,1759958,1760380,1761224,1762351,1762675,1762836,1763657,1764115,1764301,1765013,1765960,1766220,1766529,1766723,1766904,1767149,1767564,1767805,1768069,1768199,1768477,1768703 1706657,1724677,1729208,1729578,1745103,1747275,1748346,1748720,1758159,1758995,1760015,1760532,1761305,1762481,1762731,1763006,1763783,1764210,1764459,1765178,1766142,1766409,1766648,1766803,1766971,1767297,1767735,1767918,1768107,1768378,1768626,1770339 Gene ID= ENSG00000138834.12 TPM= 12.68 Transcript Type= NA chr16 1706203 1730044 1706203 1730044 + transcript637.chr16.nic@MAPK8IP3 transcript637.chr16.nic protein_coding 1706203,1724557,1729138,1729487 1706657,1724677,1729208,1730044 Gene ID= ENSG00000138834.12 TPM= 1.81 Transcript Type= NA chr16 1770286 1771730 1770286 1771730 - ENST00000219302.7@NME3 ENST00000219302.7 protein_coding 1771489,1771280,1771070,1770881,1770286 1771730,1771410,1771171,1770993,1770766 Gene ID= ENSG00000103024.7 TPM= 100.97 Transcript Type= protein_coding chr16 1770344 1771561 1770344 1771561 - ENST00000563498.1@NME3 ENST00000563498.1 protein_coding 1771280,1771070,1770881,1770344 1771561,1771171,1770993,1770766 Gene ID= ENSG00000103024.7 TPM= 19.02 Transcript Type= protein_coding chr16 1770335 1771538 1770335 1771538 - ENST00000561637.5@NME3 ENST00000561637.5 protein_coding 1771070,1770881,1770335 1771538,1770993,1770766 Gene ID= ENSG00000103024.7 TPM= 6.34 Transcript Type= retained_intron chr16 1770377 1771557 1770377 1771557 - ENST00000566600.1@NME3 ENST00000566600.1 protein_coding 1771489,1771070,1770881,1770377 1771557,1771410,1770993,1770766 Gene ID= ENSG00000103024.7 TPM= 20.83 Transcript Type= retained_intron chr16 1770342 1771510 1770342 1771510 - ENST00000568561.5@NME3 ENST00000568561.5 protein_coding 1771489,1771280,1771070,1770881,1770342 1771510,1771410,1771191,1770993,1770766 Gene ID= ENSG00000103024.7 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr16 1771890 1773155 1771890 1773155 - ENST00000397375.6@MRPS34 ENST00000397375.6 protein_coding 1772799,1772604,1771890 1773155,1772646,1772513 Gene ID= ENSG00000074071.14 TPM= 192.58 Transcript Type= protein_coding chr16 1771890 1773150 1771890 1773150 - ENST00000177742.7@MRPS34 ENST00000177742.7 protein_coding 1772799,1772604,1771890 1773150,1772646,1772534 Gene ID= ENSG00000074071.14 TPM= 14.19 Transcript Type= protein_coding chr16 1771896 1772698 1771896 1772698 - ENST00000569585.1@MRPS34 ENST00000569585.1 protein_coding 1772604,1771896 1772698,1772513 Gene ID= ENSG00000074071.14 TPM= 3.32 Transcript Type= retained_intron chr16 1776712 1782820 1776712 1782820 - ENST00000566339.5@SPSB3 ENST00000566339.5 protein_coding 1782502,1781358,1778435,1778134,1777946,1777747,1776712 1782820,1781495,1778612,1778321,1778048,1777872,1777443 Gene ID= ENSG00000162032.15 TPM= 132.75 Transcript Type= protein_coding chr16 1776718 1782557 1776718 1782557 - ENST00000567868.5@SPSB3 ENST00000567868.5 protein_coding 1782502,1781358,1778134,1777946,1777747,1776718 1782557,1781495,1778612,1778048,1777872,1777443 Gene ID= ENSG00000162032.15 TPM= 46.73 Transcript Type= retained_intron chr16 1776714 1782505 1776714 1782505 - ENST00000564709.5@SPSB3 ENST00000564709.5 protein_coding 1781766,1781358,1778134,1777946,1777747,1776714 1782505,1781495,1778612,1778048,1777872,1777443 Gene ID= ENSG00000162032.15 TPM= 9.6 Transcript Type= retained_intron chr16 1776722 1782594 1776722 1782594 - ENST00000563741.5@SPSB3 ENST00000563741.5 protein_coding 1782502,1781358,1777946,1777747,1776722 1782594,1781495,1778612,1777872,1777443 Gene ID= ENSG00000162032.15 TPM= 14.13 Transcript Type= retained_intron chr16 1776718 1782552 1776718 1782552 - ENST00000569380.5@SPSB3 ENST00000569380.5 protein_coding 1782502,1781358,1777747,1776718 1782552,1781495,1778612,1777443 Gene ID= ENSG00000162032.15 TPM= 1.45 Transcript Type= retained_intron chr16 1782932 1789181 1782932 1789181 + ENST00000568834.5@NUBP2 ENST00000568834.5 protein_coding 1782932,1786537,1787677,1787941,1788138,1788569 1783036,1786655,1787831,1788051,1788207,1789181 Gene ID= ENSG00000095906.16 TPM= 15.39 Transcript Type= nonsense_mediated_decay chr16 1782901 1789191 1782901 1789191 + ENST00000262302.13@NUBP2 ENST00000262302.13 protein_coding 1782901,1786537,1786757,1787677,1787941,1788138,1788569 1783036,1786655,1786955,1787831,1788051,1788207,1789191 Gene ID= ENSG00000095906.16 TPM= 89.2 Transcript Type= protein_coding chr16 1782932 1789183 1782932 1789183 + ENST00000567700.5@NUBP2 ENST00000567700.5 protein_coding 1782932,1786537,1787941,1788138,1788569 1783036,1787831,1788051,1788207,1789183 Gene ID= ENSG00000095906.16 TPM= 5.89 Transcript Type= retained_intron chr16 1807633 1827194 1807633 1827194 - ENST00000397356.7@HAGH ENST00000397356.7 protein_coding 1826712,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1807633 1827194,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382 Gene ID= ENSG00000063854.12 TPM= 105.95 Transcript Type= protein_coding chr16 1809103 1826841 1809103 1826841 - ENST00000397353.6@HAGH ENST00000397353.6 protein_coding 1826712,1826507,1822865,1822300,1819897,1819115,1817168,1816893,1809754,1809103 1826841,1826602,1823037,1822364,1820014,1819223,1817271,1816994,1809833,1809382 Gene ID= ENSG00000063854.12 TPM= 103.23 Transcript Type= protein_coding chr16 1827213 1840200 1827213 1840200 + transcript670.chr16.nnic@FAHD1 transcript670.chr16.nnic protein_coding 1827213,1838016,1839262 1827707,1838134,1840200 Gene ID= ENSG00000180185.11 TPM= 1.81 Transcript Type= NA chr16 1938210 1943326 1938210 1943326 - ENST00000361871.7@MSRB1 ENST00000361871.7 protein_coding 1943102,1941257,1940778,1938210 1943326,1941405,1940892,1939143 Gene ID= ENSG00000198736.11 TPM= 47.09 Transcript Type= protein_coding chr16 1959508 1961975 1959508 1961975 + ENST00000268668.10@NDUFB10 ENST00000268668.10 protein_coding 1959508,1961153,1961497,1961797 1959754,1961291,1961636,1961975 Gene ID= ENSG00000140990.14 TPM= 106.7 Transcript Type= protein_coding chr16 1959543 1961975 1959543 1961975 + ENST00000543683.6@NDUFB10 ENST00000543683.6 protein_coding 1959543,1961153,1961497 1959754,1961291,1961975 Gene ID= ENSG00000140990.14 TPM= 4.37 Transcript Type= protein_coding chr16 1959552 1961975 1959552 1961975 + ENST00000569148.1@NDUFB10 ENST00000569148.1 protein_coding 1959552,1961153,1961497,1961797 1959754,1961258,1961636,1961975 Gene ID= ENSG00000140990.14 TPM= 1.2 Transcript Type= protein_coding chr16 1962052 1964860 1962052 1964860 - ENST00000343262.8@RPS2 ENST00000343262.8 protein_coding 1964807,1964449,1964276,1963149,1962736,1962497,1962052 1964860,1964628,1964365,1963256,1962909,1962656,1962270 Gene ID= ENSG00000140988.15 TPM= 2027.52 Transcript Type= protein_coding chr16 1964959 1965509 1964959 1965509 + ENST00000531523.1@SNHG9 ENST00000531523.1 lincRNA 1964959,1965406 1965129,1965509 Gene ID= ENSG00000255198.4 TPM= 50.71 Transcript Type= lincRNA chr16 1972086 1978684 1972086 1978684 + ENST00000569628.5@TBL3 ENST00000569628.5 protein_coding 1972086,1974056,1974376,1974538,1974763,1974928,1975187,1975345,1975529,1975808,1976056,1976211,1976814,1977054,1977356,1977514,1977742,1977958,1978149,1978313,1978552 1972205,1974292,1974423,1974679,1974847,1975098,1975262,1975438,1975710,1975949,1976114,1976314,1976961,1977284,1977426,1977670,1977800,1978061,1978220,1978471,1978684 Gene ID= ENSG00000183751.14 TPM= 3.78 Transcript Type= retained_intron chr16 1984213 1987749 1984213 1987749 + ENST00000248114.6@GFER ENST00000248114.6 protein_coding 1984213,1984747,1985866 1984476,1984943,1987749 Gene ID= ENSG00000127554.12 TPM= 25.36 Transcript Type= protein_coding chr16 1989945 1994275 1989945 1994275 + ENST00000248121.6@SYNGR3 ENST00000248121.6 protein_coding 1989945,1991974,1992636,1992863 1990201,1992211,1992778,1994275 Gene ID= ENSG00000127561.14 TPM= 2.72 Transcript Type= protein_coding chr16 1997653 2009831 1997653 2009831 - transcript702.chr16.nic@ZNF598 transcript702.chr16.nic protein_coding 2009524,2003616,2002991,2002521,2002206,2001583,2001004,2000409,1999496,1998965,1998702,1997653 2009831,2003728,2003120,2002732,2002423,2001700,2001191,2000481,2000256,1999121,1998852,1998585 Gene ID= ENSG00000167962.13 TPM= 25.06 Transcript Type= NA chr16 1997653 2009831 1997653 2009831 - transcript705.chr16.nic@ZNF598 transcript705.chr16.nic protein_coding 2009524,2003616,2002991,2002521,2001583,2001004,2000391,1999496,1998965,1998702,1997653 2009831,2003728,2003120,2002732,2002423,2001191,2000481,2000256,1999121,1998852,1998585 Gene ID= ENSG00000167962.13 TPM= 5.13 Transcript Type= NA chr16 1997654 2009764 1997654 2009764 - ENST00000562988.5@ZNF598 ENST00000562988.5 protein_coding 2009524,2003616,2002991,2002206,2001592,2001004,2000409,1999496,1998965,1998702,1997654 2009764,2003728,2003120,2002732,2001700,2001191,2000481,2000256,1999121,1998852,1998585 Gene ID= ENSG00000167962.13 TPM= 3.32 Transcript Type= retained_intron chr16 2033254 2038479 2033254 2038479 + transcript720.chr16.nic@SLC9A3R2 transcript720.chr16.nic protein_coding 2033254,2036324,2036728,2036955,2037538,2037859 2033432,2036503,2036881,2036998,2037600,2038479 Gene ID= ENSG00000065054.13 TPM= 2.94 Transcript Type= NA chr16 2026868 2039026 2026868 2039026 + ENST00000424542.6@SLC9A3R2 ENST00000424542.6 protein_coding 2026868,2029582,2036324,2036728,2036955,2037538,2037826 2027218,2029782,2036503,2036881,2036998,2037600,2039026 Gene ID= ENSG00000065054.13 TPM= 56.37 Transcript Type= protein_coding chr16 2026928 2038489 2026928 2038489 + ENST00000432365.6@SLC9A3R2 ENST00000432365.6 protein_coding 2026928,2029582,2036324,2036728,2036955,2037538,2037859 2027218,2029782,2036503,2036881,2036998,2037600,2038489 Gene ID= ENSG00000065054.13 TPM= 11.09 Transcript Type= protein_coding chr16 2039815 2047866 2039815 2047866 - ENST00000219066.5@NTHL1 ENST00000219066.5 protein_coding 2047709,2046128,2044630,2043567,2040133,2039815 2047866,2046366,2044800,2043726,2040238,2040047 Gene ID= ENSG00000065057.7 TPM= 21.73 Transcript Type= protein_coding chr16 2047979 2088711 2047979 2088711 + transcript724.chr16.nic@TSC2 transcript724.chr16.nic protein_coding 2047979,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079035,2079276,2079557,2080165,2081595,2082436,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446 2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2082504,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088711 Gene ID= ENSG00000103197.16 TPM= 2.81 Transcript Type= NA chr16 2047979 2089488 2047979 2089488 + transcript726.chr16.nic@TSC2 transcript726.chr16.nic protein_coding 2047979,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079032,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446 2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2089488 Gene ID= ENSG00000103197.16 TPM= 25.74 Transcript Type= NA chr16 2047979 2088711 2047979 2088711 + transcript729.chr16.nnic@TSC2 transcript729.chr16.nnic protein_coding 2047979,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079276,2079557,2080165,2081672,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446 2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088711 Gene ID= ENSG00000103197.16 TPM= 2.81 Transcript Type= NA chr16 2047989 2088702 2047989 2088702 + ENST00000401874.6@TSC2 ENST00000401874.6 protein_coding 2047989,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2079035,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446 2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088702 Gene ID= ENSG00000103197.16 TPM= 40.69 Transcript Type= protein_coding chr16 2048020 2088712 2048020 2088712 + ENST00000350773.8@TSC2 ENST00000350773.8 protein_coding 2048020,2048587,2050400,2053342,2054296,2055402,2056196,2056644,2057105,2058747,2060670,2061871,2062497,2062972,2064272,2065519,2070456,2071510,2071784,2072241,2072849,2074200,2075799,2076068,2076491,2077598,2079032,2079276,2079557,2080165,2081595,2083695,2084228,2084951,2085230,2086193,2086732,2087863,2088048,2088227,2088446 2048065,2048753,2050486,2053452,2054440,2055519,2056244,2056769,2057178,2058873,2060813,2062008,2062600,2063053,2064427,2065635,2070578,2071616,2071934,2072363,2072983,2074389,2075892,2076170,2076585,2077726,2079196,2079428,2079669,2080377,2081798,2083816,2084715,2085026,2085322,2086379,2086871,2087941,2088139,2088325,2088712 Gene ID= ENSG00000103197.16 TPM= 3.11 Transcript Type= protein_coding chr16 2148624 2154165 2148624 2154165 + ENST00000210187.10@RAB26 ENST00000210187.10 protein_coding 2148624,2149941,2151569,2151695,2151856,2152820,2152989,2153146,2153319 2148978,2150051,2151610,2151761,2151908,2152885,2153045,2153222,2154165 Gene ID= ENSG00000167964.12 TPM= 2.72 Transcript Type= protein_coding chr16 2154797 2155358 2154797 2155358 - ENST00000563192.1@SNHG19 ENST00000563192.1 lincRNA 2155143,2154797 2155358,2154922 Gene ID= ENSG00000260260.1 TPM= 23.54 Transcript Type= lincRNA chr16 2155765 2178129 2155765 2178129 + ENST00000326181.10@TRAF7 ENST00000326181.10 protein_coding 2155765,2163883,2165879,2168077,2170614,2171264,2171572,2172191,2172465,2173182,2173481,2173788,2173921,2174251,2175111,2175301,2175500,2175834,2176049,2176265,2176560 2155858,2164001,2165936,2168168,2170730,2171356,2171605,2172374,2172599,2173399,2173554,2173836,2174048,2174333,2175150,2175417,2175622,2175953,2176180,2176384,2178129 Gene ID= ENSG00000131653.12 TPM= 141.27 Transcript Type= protein_coding chr16 2205471 2209397 2205471 2209397 + ENST00000568194.5@MLST8 ENST00000568194.5 protein_coding 2205471,2206358,2206497,2207035,2207193,2208210,2208450,2208759 2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397 Gene ID= ENSG00000167965.17 TPM= 14.04 Transcript Type= retained_intron chr16 2205494 2209412 2205494 2209412 + ENST00000301724.14@MLST8 ENST00000301724.14 protein_coding 2205494,2206031,2206358,2206497,2207035,2207193,2208210,2208450 2205512,2206214,2206409,2206659,2207110,2207345,2208334,2209412 Gene ID= ENSG00000167965.17 TPM= 1.36 Transcript Type= protein_coding chr16 2205741 2209397 2205741 2209397 + ENST00000397124.5@MLST8 ENST00000397124.5 protein_coding 2205741,2206031,2206358,2206497,2207035,2207193,2208210,2208450,2208759 2205875,2206214,2206409,2206659,2207110,2207345,2208334,2208613,2209397 Gene ID= ENSG00000167965.17 TPM= 22.19 Transcript Type= protein_coding chr16 2205731 2209416 2205731 2209416 + ENST00000566835.5@MLST8 ENST00000566835.5 protein_coding 2205731,2206061,2206358,2206497,2207035,2207193,2208450,2208759 2205875,2206214,2206409,2206659,2207110,2207345,2208613,2209416 Gene ID= ENSG00000167965.17 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr16 2209252 2214849 2209252 2214849 - transcript778.chr16.nic@BRICD5 transcript778.chr16.nic protein_coding 2214138,2213581,2210783,2210522,2210126,2209950,2209553,2209252 2214849,2214053,2212847,2210650,2210281,2210051,2209706,2209456 Gene ID= ENSG00000182685.7 TPM= 9.51 Transcript Type= NA chr16 2209252 2214849 2209252 2214849 - transcript780.chr16.nic@BRICD5 transcript780.chr16.nic protein_coding 2214138,2210783,2210522,2210126,2209950,2209553,2209252 2214849,2214053,2210650,2210281,2210051,2209706,2209456 Gene ID= ENSG00000182685.7 TPM= 4.98 Transcript Type= NA chr16 2211998 2214849 2211998 2214849 - transcript785.chr16.nnic@PGP transcript785.chr16.nnic protein_coding 2214138,2213581,2211998 2214849,2214053,2213091 Gene ID= ENSG00000184207.8 TPM= 4.53 Transcript Type= NA chr16 2211997 2214807 2211997 2214807 - ENST00000333503.7@PGP ENST00000333503.7 protein_coding 2214138,2211997 2214807,2214053 Gene ID= ENSG00000184207.8 TPM= 67.92 Transcript Type= protein_coding chr16 2223566 2235742 2223566 2235742 + ENST00000301727.8@E4F1 ENST00000301727.8 protein_coding 2223566,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216 2223770,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742 Gene ID= ENSG00000167967.15 TPM= 70.79 Transcript Type= protein_coding chr16 2223659 2235742 2223659 2235742 + transcript793.chr16.nic@E4F1 transcript793.chr16.nic protein_coding 2223659,2228372,2229570,2232171,2232456,2232756,2233011,2233438,2233882,2234171,2234583,2234859,2235081,2235216 2223929,2228523,2229675,2232364,2232576,2232908,2233183,2233647,2233990,2234388,2234781,2235001,2235143,2235742 Gene ID= ENSG00000167967.15 TPM= 5.59 Transcript Type= NA chr16 2253115 2267861 2253115 2267861 - transcript808.chr16.nic@RNPS1 transcript808.chr16.nic protein_coding 2267575,2264573,2264176,2263096,2262740,2262278,2255585,2253115 2267861,2264760,2264331,2263287,2262842,2262431,2255726,2254063 Gene ID= ENSG00000205937.11 TPM= 10.08 Transcript Type= NA chr16 2253116 2268412 2253116 2268412 - ENST00000320225.9@RNPS1 ENST00000320225.9 protein_coding 2268055,2264573,2264176,2263096,2262740,2262278,2255585,2253116 2268412,2264760,2264331,2263287,2262842,2262431,2255726,2254063 Gene ID= ENSG00000205937.11 TPM= 56.26 Transcript Type= protein_coding chr16 2253117 2268397 2253117 2268397 - ENST00000566458.5@RNPS1 ENST00000566458.5 protein_coding 2268055,2264176,2263096,2262740,2262278,2255585,2253117 2268397,2264331,2263287,2262842,2262431,2255726,2254063 Gene ID= ENSG00000205937.11 TPM= 99.43 Transcript Type= protein_coding chr16 2253116 2267848 2253116 2267848 - ENST00000397086.6@RNPS1 ENST00000397086.6 protein_coding 2267663,2264573,2264176,2263096,2262740,2262278,2255585,2253116 2267848,2264760,2264331,2263287,2262842,2262431,2255726,2254063 Gene ID= ENSG00000205937.11 TPM= 24.57 Transcript Type= protein_coding chr16 2323337 2340793 2323337 2340793 - transcript819.chr16.nic@ABCA3 transcript819.chr16.nic protein_coding 2340573,2329648,2328453,2326413,2326010,2324404,2323337 2340793,2329854,2328757,2326492,2326274,2324531,2323688 Gene ID= ENSG00000167972.13 TPM= 1.81 Transcript Type= NA chr16 2275881 2340735 2275881 2340735 - ENST00000301732.9@ABCA3 ENST00000301732.9 protein_coding 2340573,2329648,2328453,2326413,2326010,2324404,2323523,2319581,2317648,2317283,2308450,2303969,2300005,2299403,2298386,2297766,2297329,2295590,2292140,2289434,2288026,2286694,2285442,2284779,2284279,2283186,2281381,2281027,2278943,2278288,2277879,2277597,2275881 2340735,2329854,2328757,2326492,2326274,2324531,2323688,2319840,2317764,2317403,2308623,2304150,2300148,2299532,2298540,2297921,2297539,2295740,2292238,2289620,2288329,2286967,2285646,2284998,2284437,2283358,2281509,2281221,2279130,2278458,2278069,2277670,2276805 Gene ID= ENSG00000167972.13 TPM= 38.94 Transcript Type= protein_coding chr16 2429394 2458854 2429394 2458854 + ENST00000397066.8@CCNF ENST00000397066.8 protein_coding 2429394,2431130,2432961,2435806,2437129,2438070,2439353,2439749,2443649,2445458,2448855,2449282,2449828,2453210,2453410,2455395,2456545 2429497,2431284,2433067,2435873,2437322,2438123,2439457,2439826,2443800,2445622,2448978,2449462,2449915,2453309,2453537,2455564,2458854 Gene ID= ENSG00000162063.12 TPM= 2.72 Transcript Type= protein_coding chr16 2475051 2505734 2475051 2505734 + ENST00000567020.6@TBC1D24 ENST00000567020.6 protein_coding 2475051,2496034,2498238,2499357,2499835,2500268,2500804 2475170,2497113,2498396,2499420,2499930,2500490,2505734 Gene ID= ENSG00000162065.12 TPM= 9.96 Transcript Type= protein_coding chr16 2513870 2520218 2513870 2520218 + ENST00000330398.8@ATP6V0C ENST00000330398.8 protein_coding 2513870,2519218,2519541 2514182,2519401,2520218 Gene ID= ENSG00000185883.11 TPM= 153.94 Transcript Type= protein_coding chr16 2520340 2531438 2520340 2531438 + transcript839.chr16.nnic@AMDHD2 transcript839.chr16.nnic protein_coding 2520340,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528629,2528994,2529475 2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2531438 Gene ID= ENSG00000162066.14 TPM= 3.62 Transcript Type= NA chr16 2520340 2531438 2520340 2531438 + transcript845.chr16.nic@AMDHD2 transcript845.chr16.nic protein_coding 2520340,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528994,2529475 2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2529095,2531438 Gene ID= ENSG00000162066.14 TPM= 11.77 Transcript Type= NA chr16 2520340 2531438 2520340 2531438 + transcript848.chr16.nic@AMDHD2 transcript848.chr16.nic protein_coding 2520340,2520769,2520984,2527561,2528060,2528236,2528452,2528650,2528994,2529475 2520541,2520905,2521123,2527615,2528148,2528380,2528559,2528718,2529095,2531438 Gene ID= ENSG00000162066.14 TPM= 3.62 Transcript Type= NA chr16 2520371 2531438 2520371 2531438 + transcript854.chr16.nic@AMDHD2 transcript854.chr16.nic protein_coding 2520371,2520984,2527773,2528060,2528236,2528452,2528650,2528994,2529475 2520541,2521123,2527985,2528148,2528380,2528559,2528718,2529095,2531438 Gene ID= ENSG00000162066.14 TPM= 3.62 Transcript Type= NA chr16 2520340 2531419 2520340 2531419 + transcript855.chr16.nic@AMDHD2 transcript855.chr16.nic protein_coding 2520340,2520769,2520984,2527561,2527773,2528060,2528236,2528452 2520541,2520905,2521123,2527615,2527985,2528148,2528380,2531419 Gene ID= ENSG00000162066.14 TPM= 4.53 Transcript Type= NA chr16 2520365 2531422 2520365 2531422 + ENST00000302956.8@AMDHD2 ENST00000302956.8 protein_coding 2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528994,2529475 2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528718,2529095,2531422 Gene ID= ENSG00000162066.14 TPM= 20.83 Transcript Type= protein_coding chr16 2520365 2529698 2520365 2529698 + ENST00000293971.10@AMDHD2 ENST00000293971.10 protein_coding 2520365,2520769,2520984,2527561,2527773,2528060,2528236,2528452,2528650,2528994,2529475 2520541,2520905,2521123,2527615,2527985,2528148,2528380,2528559,2528718,2529095,2529698 Gene ID= ENSG00000162066.14 TPM= 26.26 Transcript Type= protein_coding chr16 2537964 2603188 2537964 2603188 + ENST00000342085.8@PDPK1 ENST00000342085.8 protein_coding 2537964,2557703,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651 2538136,2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2603188 Gene ID= ENSG00000140992.18 TPM= 8.45 Transcript Type= protein_coding chr16 2557503 2603185 2557503 2603185 + transcript862.chr16.nic@PDPK1 transcript862.chr16.nic protein_coding 2557503,2561480,2561771,2565553,2566356,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651 2557963,2561522,2561908,2565697,2566453,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2603185 Gene ID= ENSG00000140992.18 TPM= 6.64 Transcript Type= NA chr16 2538003 2601095 2538003 2601095 + ENST00000268673.11@PDPK1 ENST00000268673.11 protein_coding 2538003,2557703,2561480,2577425,2581295,2581607,2583412,2586676,2595793,2597123,2597651 2538136,2557963,2561522,2577500,2581363,2581703,2583585,2586893,2595850,2597275,2601095 Gene ID= ENSG00000140992.18 TPM= 3.02 Transcript Type= protein_coding chr16 2603447 2617819 2603447 2617819 + transcript866.chr16.nnic@AC141586.1 transcript866.chr16.nnic transcribed_unprocessed_pseudogene 2603447,2610462,2613960,2615188 2603727,2611052,2614068,2617819 Gene ID= ENSG00000215154.6 TPM= 1.81 Transcript Type= NA chr16 2603350 2630494 2603350 2630494 + ENST00000399702.5@AC141586.1 ENST00000399702.5 transcribed_unprocessed_pseudogene 2603350,2610462,2613960,2628825 2603727,2611052,2614068,2630494 Gene ID= ENSG00000215154.6 TPM= 1.81 Transcript Type= processed_transcript chr16 2616201 2642389 2616201 2642389 - transcript864.chr16.nnic@PDPK2P transcript864.chr16.nnic transcribed_unprocessed_pseudogene 2642229,2638670,2638284,2634495,2633739,2622690,2618822,2618482,2616600,2616201 2642389,2638712,2638421,2634639,2633836,2622765,2618890,2618578,2616773,2616354 Gene ID= ENSG00000205918.9 TPM= 1.81 Transcript Type= NA chr16 2677791 2709034 2677791 2709034 + transcript878.chr16.nnic@KCTD5 transcript878.chr16.nnic protein_coding 2677791,2695935,2697906,2699821,2702353,2707298 2677983,2696043,2697997,2699916,2702478,2709034 Gene ID= ENSG00000167977.8 TPM= 1.81 Transcript Type= NA chr16 2682475 2709030 2682475 2709030 + ENST00000301738.8@KCTD5 ENST00000301738.8 protein_coding 2682475,2695935,2697906,2699821,2702353,2707298 2682800,2696043,2697997,2699916,2702478,2709030 Gene ID= ENSG00000167977.8 TPM= 61.58 Transcript Type= protein_coding chr16 2737103 2752582 2737103 2752582 - transcript884.chr16.nnic@SRRM2-AS1 transcript884.chr16.nnic antisense_RNA 2752442,2743552,2737480,2737103 2752582,2743719,2737610,2737288 Gene ID= ENSG00000205913.6 TPM= 2.72 Transcript Type= NA chr16 2752329 2771412 2752329 2771412 + ENST00000301740.12@SRRM2 ENST00000301740.12 protein_coding 2752329,2756334,2757472,2757781,2758470,2758985,2759140,2759352,2759569,2760301,2761561,2768997,2770352,2770604,2770858 2752846,2756606,2757579,2757945,2758547,2759047,2759172,2759402,2759661,2760499,2768261,2769284,2770465,2770717,2771412 Gene ID= ENSG00000167978.16 TPM= 22.64 Transcript Type= protein_coding chr16 2759881 2762875 2759881 2762875 + transcript894.chr16.nnic@SRRM2 transcript894.chr16.nnic protein_coding 2759881,2760299,2761561 2760008,2760499,2762875 Gene ID= ENSG00000167978.16 TPM= 2.26 Transcript Type= NA chr16 2769374 2771410 2769374 2771410 + ENST00000574331.5@SRRM2 ENST00000574331.5 protein_coding 2769374,2770604,2770858 2770465,2770717,2771410 Gene ID= ENSG00000167978.16 TPM= 27.62 Transcript Type= retained_intron chr16 2771414 2777297 2771414 2777297 - ENST00000409906.8@ELOB ENST00000409906.8 protein_coding 2777237,2776993,2775451,2771414 2777297,2777127,2775556,2772102 Gene ID= ENSG00000103363.14 TPM= 289.77 Transcript Type= protein_coding chr16 2830169 2832284 2830169 2832284 + ENST00000382280.7@ZG16B ENST00000382280.7 protein_coding 2830169,2830415,2830694,2831796 2830328,2830493,2830796,2832284 Gene ID= ENSG00000162078.11 TPM= 1.81 Transcript Type= protein_coding chr16 2883217 2899361 2883217 2899361 + transcript916.chr16.nnic@FLYWCH2 transcript916.chr16.nnic protein_coding 2883217,2895220,2896352,2898776,2899049 2883366,2895320,2896771,2898958,2899361 Gene ID= ENSG00000162076.12 TPM= 1.81 Transcript Type= NA chr16 2883186 2899382 2883186 2899382 + ENST00000396958.7@FLYWCH2 ENST00000396958.7 protein_coding 2883186,2895220,2896352,2899049 2883366,2895320,2896771,2899382 Gene ID= ENSG00000162076.12 TPM= 32.6 Transcript Type= protein_coding chr16 2911952 2949816 2911952 2949816 + transcript908.chr16.nic@FLYWCH1 transcript908.chr16.nic protein_coding 2911952,2914176,2928824,2929613,2930410,2933130,2933716,2937121,2938184,2940032,2948688 2912154,2914289,2928917,2930010,2930880,2933582,2933979,2937384,2938456,2940092,2949816 Gene ID= ENSG00000059122.16 TPM= 9.96 Transcript Type= NA chr16 2936525 2949811 2936525 2949811 + ENST00000574985.1@FLYWCH1 ENST00000574985.1 protein_coding 2936525,2938184,2940032,2948688 2937384,2938456,2940092,2949811 Gene ID= ENSG00000059122.16 TPM= 4.53 Transcript Type= retained_intron chr16 2969224 2973482 2969224 2973482 + transcript922.chr16.nnic@PAQR4 transcript922.chr16.nnic protein_coding 2969224,2971157,2971515,2971886 2969840,2971378,2971684,2973482 Gene ID= ENSG00000162073.13 TPM= 2.26 Transcript Type= NA chr16 2969245 2973489 2969245 2973489 + ENST00000318782.8@PAQR4 ENST00000318782.8 protein_coding 2969245,2971157,2971515 2969840,2971378,2973489 Gene ID= ENSG00000162073.13 TPM= 49.35 Transcript Type= protein_coding chr16 3020312 3022383 3020312 3022383 + ENST00000326577.8@TNFRSF12A ENST00000326577.8 protein_coding 3020312,3021215,3021555,3021771 3020491,3021319,3021689,3022383 Gene ID= ENSG00000006327.13 TPM= 32.45 Transcript Type= protein_coding chr16 3020359 3022383 3020359 3022383 + ENST00000341627.5@TNFRSF12A ENST00000341627.5 protein_coding 3020359,3021555,3021771 3020491,3021689,3022383 Gene ID= ENSG00000006327.13 TPM= 2.56 Transcript Type= protein_coding chr16 3020390 3022383 3020390 3022383 + ENST00000571351.1@TNFRSF12A ENST00000571351.1 protein_coding 3020390,3021555,3021771 3021319,3021689,3022383 Gene ID= ENSG00000006327.13 TPM= 2.11 Transcript Type= retained_intron chr16 3022620 3024246 3022620 3024246 - ENST00000248089.7@HCFC1R1 ENST00000248089.7 protein_coding 3023847,3023474,3023233,3022620 3024246,3023530,3023361,3022998 Gene ID= ENSG00000103145.10 TPM= 56.44 Transcript Type= protein_coding chr16 3022626 3024215 3022626 3024215 - ENST00000573095.1@HCFC1R1 ENST00000573095.1 protein_coding 3024181,3023847,3023233,3022626 3024215,3023968,3023530,3022998 Gene ID= ENSG00000103145.10 TPM= 3.47 Transcript Type= retained_intron chr16 3022625 3023961 3022625 3023961 - ENST00000574151.5@HCFC1R1 ENST00000574151.5 protein_coding 3023847,3023233,3022625 3023961,3023361,3022998 Gene ID= ENSG00000103145.10 TPM= 1.66 Transcript Type= protein_coding chr16 3024005 3027755 3024005 3027755 + transcript933.chr16.nic@THOC6 transcript933.chr16.nic protein_coding 3024005,3025708,3025924,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577 3024365,3025823,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027755 Gene ID= ENSG00000131652.13 TPM= 4.53 Transcript Type= NA chr16 3024031 3027754 3024031 3027754 + ENST00000326266.12@THOC6 ENST00000326266.12 protein_coding 3024031,3025708,3025924,3026063,3026251,3026365,3026516,3026679,3026867,3027011,3027170,3027366,3027577 3024365,3025823,3025988,3026166,3026288,3026413,3026587,3026781,3026916,3027073,3027280,3027500,3027754 Gene ID= ENSG00000131652.13 TPM= 43.47 Transcript Type= protein_coding chr16 3128672 3134882 3128672 3134882 - ENST00000571963.5@ZNF213-AS1 ENST00000571963.5 antisense_RNA 3134630,3131747,3128672 3134882,3132103,3129653 Gene ID= ENSG00000263072.6 TPM= 2.72 Transcript Type= antisense_RNA chr16 3112560 3120517 3112560 3120517 + ENST00000382192.7@ZNF205 ENST00000382192.7 protein_coding 3112560,3113349,3115355,3115829,3116427,3118905,3119256 3112682,3113487,3115568,3115920,3116547,3119015,3120517 Gene ID= ENSG00000122386.10 TPM= 7.24 Transcript Type= protein_coding chr16 3112579 3120515 3112579 3120515 + ENST00000620094.4@ZNF205 ENST00000620094.4 protein_coding 3112579,3113349,3115355,3115829,3116427,3118905,3119256 3112950,3113487,3115568,3115920,3116547,3119015,3120515 Gene ID= ENSG00000122386.10 TPM= 2.72 Transcript Type= protein_coding chr16 3112573 3120483 3112573 3120483 + ENST00000219091.8@ZNF205 ENST00000219091.8 protein_coding 3112573,3113417,3115355,3115829,3116427,3118905,3119256 3112682,3113487,3115568,3115920,3116547,3119015,3120483 Gene ID= ENSG00000122386.10 TPM= 11.77 Transcript Type= protein_coding chr16 3135029 3142803 3135029 3142803 + transcript970.chr16.nnic@ZNF213 transcript970.chr16.nnic protein_coding 3135029,3137166,3138354,3138745,3138975,3140636 3135387,3137679,3138541,3138818,3139098,3142803 Gene ID= ENSG00000085644.13 TPM= 2.11 Transcript Type= NA chr16 3135028 3142805 3135028 3142805 + ENST00000396878.7@ZNF213 ENST00000396878.7 protein_coding 3135028,3137166,3138418,3138745,3138975,3140689 3135387,3137679,3138541,3138818,3139098,3142805 Gene ID= ENSG00000085644.13 TPM= 30.63 Transcript Type= protein_coding chr16 3135159 3142804 3135159 3142804 + ENST00000576863.1@ZNF213 ENST00000576863.1 protein_coding 3135159,3137166,3138354,3138745,3138975,3140689 3135387,3137679,3138541,3138818,3139098,3142804 Gene ID= ENSG00000085644.13 TPM= 1.66 Transcript Type= nonsense_mediated_decay chr16 3144197 3149972 3144197 3149972 + transcript980.chr16.nic@CASP16P transcript980.chr16.nic transcribed_unprocessed_pseudogene 3144197,3144743,3145668,3145918,3147258,3147803,3148324,3148936,3149695 3144324,3144831,3145778,3146085,3147480,3147919,3148398,3149039,3149972 Gene ID= ENSG00000228146.7 TPM= 3.62 Transcript Type= NA chr16 3144243 3149963 3144243 3149963 + ENST00000428155.1@CASP16P ENST00000428155.1 transcribed_unprocessed_pseudogene 3144243,3144453,3144743,3145668,3145918,3147258,3147803,3148324,3148936,3149695 3144324,3144647,3144831,3145778,3146085,3147480,3147919,3148398,3149039,3149963 Gene ID= ENSG00000228146.7 TPM= 3.62 Transcript Type= processed_transcript chr16 3222325 3235456 3222325 3235456 - ENST00000414144.6@ZNF200 ENST00000414144.6 protein_coding 3234987,3233506,3232833,3232421,3222325 3235456,3233836,3232921,3232547,3224613 Gene ID= ENSG00000010539.11 TPM= 7.24 Transcript Type= protein_coding chr16 3282943 3291460 3282943 3291460 + ENST00000219069.5@ZNF263 ENST00000219069.5 protein_coding 3282943,3285059,3285681,3286023,3288454,3289393 3284205,3285239,3285754,3286149,3288570,3291460 Gene ID= ENSG00000006194.9 TPM= 11.77 Transcript Type= protein_coding chr16 3298832 3305645 3298832 3305645 - ENST00000396862.1@TIGD7 ENST00000396862.1 protein_coding 3305212,3298832 3305645,3302009 Gene ID= ENSG00000140993.10 TPM= 1.81 Transcript Type= protein_coding chr16 3305485 3318575 3305485 3318575 + transcript1005.chr16.nic@ZNF75A transcript1005.chr16.nic protein_coding 3305485,3308313,3311753,3312677,3313049,3316912,3317190 3305643,3308836,3311948,3312768,3313175,3317022,3318575 Gene ID= ENSG00000162086.14 TPM= 4.53 Transcript Type= NA chr16 3305486 3318852 3305486 3318852 + ENST00000574298.5@ZNF75A ENST00000574298.5 protein_coding 3305486,3311753,3312677,3313049,3316912,3317190 3305643,3311948,3312768,3313175,3317022,3318852 Gene ID= ENSG00000162086.14 TPM= 3.62 Transcript Type= protein_coding chr16 3382085 3401013 3382085 3401013 - transcript1017.chr16.nic@ZSCAN32 transcript1017.chr16.nic protein_coding 3400945,3397192,3393649,3390423,3390010,3384459,3382085 3401013,3397744,3393814,3390517,3390183,3384941,3383711 Gene ID= ENSG00000140987.19 TPM= 1.81 Transcript Type= NA chr16 3382081 3401013 3382081 3401013 - transcript1019.chr16.nic@ZSCAN32 transcript1019.chr16.nic protein_coding 3400945,3397192,3393649,3390423,3390010,3382081 3401013,3397744,3393814,3390517,3390133,3384941 Gene ID= ENSG00000140987.19 TPM= 2.72 Transcript Type= NA chr16 3401244 3405079 3401244 3405079 + ENST00000344823.9@ZNF174 ENST00000344823.9 protein_coding 3401244,3404426,3404909 3402406,3404648,3405079 Gene ID= ENSG00000103343.12 TPM= 1.81 Transcript Type= protein_coding chr16 3432422 3443542 3432422 3443542 - ENST00000301744.5@ZNF597 ENST00000301744.5 protein_coding 3443360,3443121,3440807,3432422 3443542,3443206,3440933,3437538 Gene ID= ENSG00000167981.5 TPM= 8.15 Transcript Type= protein_coding chr16 3443611 3486963 3443611 3486963 + ENST00000407558.8@NAA60 ENST00000407558.8 protein_coding 3443611,3448471,3476222,3479471,3482502,3483363,3484699,3485467 3443837,3448540,3476337,3479600,3482598,3483597,3485061,3486963 Gene ID= ENSG00000122390.17 TPM= 7.82 Transcript Type= protein_coding chr16 3443657 3486962 3443657 3486962 + transcript1040.chr16.nic@NAA60 transcript1040.chr16.nic protein_coding 3443657,3448471,3476222,3479471,3482502,3483363,3484699 3443837,3448540,3476337,3479600,3482598,3483597,3486962 Gene ID= ENSG00000122390.17 TPM= 4.06 Transcript Type= NA chr16 3457712 3486962 3457712 3486962 + transcript1047.chr16.nic@NAA60 transcript1047.chr16.nic protein_coding 3457712,3476222,3479471,3482502,3483363,3484699 3458181,3476337,3479600,3482598,3483597,3486962 Gene ID= ENSG00000122390.17 TPM= 32.13 Transcript Type= NA chr16 3457993 3486952 3457993 3486952 + ENST00000360862.9@NAA60 ENST00000360862.9 protein_coding 3457993,3479471,3482502,3483363,3484699,3485467 3458181,3479600,3482598,3483597,3485083,3486952 Gene ID= ENSG00000122390.17 TPM= 3.3 Transcript Type= protein_coding chr16 3458012 3486952 3458012 3486952 + ENST00000414063.6@NAA60 ENST00000414063.6 protein_coding 3458012,3476222,3479471,3482502,3483363,3484699,3485467 3458181,3476337,3479600,3482598,3483597,3485083,3486952 Gene ID= ENSG00000122390.17 TPM= 22.31 Transcript Type= protein_coding chr16 3458078 3486952 3458078 3486952 + ENST00000575076.5@NAA60 ENST00000575076.5 protein_coding 3458078,3476222,3479471,3482502,3483363,3484699,3485467 3458181,3476337,3479600,3482598,3483597,3485061,3486952 Gene ID= ENSG00000122390.17 TPM= 14.16 Transcript Type= protein_coding chr16 3500997 3538555 3500997 3538555 + transcript1058.chr16.nic@CLUAP1 transcript1058.chr16.nic protein_coding 3500997,3504720,3506331,3508289,3512383,3515508,3519903,3523158,3530568,3532786,3536122 3501089,3504831,3506415,3508468,3512478,3515591,3520036,3523299,3530675,3532841,3538555 Gene ID= ENSG00000103351.12 TPM= 2.26 Transcript Type= NA chr16 3500981 3538555 3500981 3538555 + transcript1059.chr16.nic@CLUAP1 transcript1059.chr16.nic protein_coding 3500981,3506331,3508289,3512383,3515508,3519903,3523158,3526412,3530568,3532786,3536122 3501089,3506415,3508468,3512478,3515591,3520036,3523299,3526484,3530675,3532841,3538555 Gene ID= ENSG00000103351.12 TPM= 5.89 Transcript Type= NA chr16 3611712 3653806 3611712 3653806 + transcript1081.chr16.nnic@DNASE1 transcript1081.chr16.nnic protein_coding 3611712,3640715,3642892,3651317 3611784,3641237,3643036,3653806 Gene ID= ENSG00000213918.10 TPM= 1.81 Transcript Type= NA chr16 3658037 3717597 3658037 3717597 - ENST00000246957.9@TRAP1 ENST00000246957.9 protein_coding 3717421,3690827,3689055,3685996,3679719,3677498,3676036,3675324,3674339,3672700,3671722,3665971,3664274,3663424,3662882,3661987,3658793,3658037 3717597,3690985,3689137,3686136,3679790,3677658,3676145,3675397,3674494,3672820,3671791,3666118,3664459,3663562,3662967,3662132,3658865,3658230 Gene ID= ENSG00000126602.10 TPM= 261.7 Transcript Type= protein_coding chr16 3725054 3880726 3725054 3880726 - ENST00000262367.9@CREBBP ENST00000262367.9 protein_coding 3879832,3850297,3810603,3793386,3791981,3782684,3781204,3780732,3778700,3778011,3777613,3774569,3773751,3770570,3769174,3767720,3758854,3757809,3757288,3751726,3749627,3745277,3744894,3740399,3739578,3738559,3736650,3736036,3731776,3731192,3725054 3880726,3851009,3810779,3793626,3792094,3782926,3781306,3780878,3778817,3778182,3777657,3774693,3773930,3770986,3769353,3767909,3758972,3758048,3757376,3751806,3749683,3745354,3744961,3740549,3739724,3738672,3736815,3736203,3731937,3731473,3729874 Gene ID= ENSG00000005339.14 TPM= 28.98 Transcript Type= protein_coding chr16 3962656 4116544 3962656 4116544 - transcript1088.chr16.nic@ADCY9 transcript1088.chr16.nic protein_coding 4115690,4113750,4007368,3993349,3992146,3988994,3983232,3979116,3977482,3974669,3962656 4116544,4115485,4007558,3993510,3992363,3989096,3983440,3979275,3977630,3974710,3966966 Gene ID= ENSG00000162104.9 TPM= 12.68 Transcript Type= NA chr16 4003032 4116544 4003032 4116544 - transcript1091.chr16.nnic@ADCY9 transcript1091.chr16.nnic protein_coding 4115690,4113750,4007368,4003032 4116544,4115485,4007558,4003507 Gene ID= ENSG00000162104.9 TPM= 1.81 Transcript Type= NA chr16 4246009 4253788 4246009 4253788 - transcript1096.chr16.nnic@LINC01569 transcript1096.chr16.nnic lincRNA 4252878,4251322,4246973,4246009 4253788,4252034,4247061,4246860 Gene ID= ENSG00000262468.5 TPM= 1.81 Transcript Type= NA chr16 4324667 4328340 4324667 4328340 - ENST00000576080.1@GLIS2-AS1 ENST00000576080.1 lincRNA 4328260,4326430,4325270,4324667 4328340,4326494,4325354,4324775 Gene ID= ENSG00000262686.1 TPM= 1.81 Transcript Type= lincRNA chr16 4340248 4351297 4340248 4351297 - transcript1118.chr16.nnic@PAM16 transcript1118.chr16.nnic protein_coding 4351232,4343483,4343207,4341368,4340920,4340248 4351297,4343594,4343291,4341504,4340985,4340405 Gene ID= ENSG00000217930.7 TPM= 2.94 Transcript Type= NA chr16 4340248 4351372 4340248 4351372 - ENST00000318059.7@PAM16 ENST00000318059.7 protein_coding 4351232,4343207,4341368,4340920,4340248 4351372,4343291,4341504,4340985,4340405 Gene ID= ENSG00000217930.7 TPM= 18.34 Transcript Type= protein_coding chr16 4340251 4345904 4340251 4345904 - ENST00000571941.5@PAM16 ENST00000571941.5 protein_coding 4345786,4343483,4343207,4341368,4340920,4340251 4345904,4343594,4343291,4341504,4340985,4340405 Gene ID= ENSG00000217930.7 TPM= 1.13 Transcript Type= protein_coding chr16 4340251 4416587 4340251 4416587 - ENST00000572467.5@CORO7-PAM16 ENST00000572467.5 protein_coding 4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361985,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4343207,4341368,4340920,4340251 4416587,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361469,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4343291,4341504,4340985,4340405 Gene ID= ENSG00000103426.12 TPM= 1.13 Transcript Type= protein_coding chr16 4354543 4416596 4354543 4416596 - transcript1111.chr16.nic@CORO7 transcript1111.chr16.nic protein_coding 4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4354543 4416596,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4355163 Gene ID= ENSG00000262246.5 TPM= 8.6 Transcript Type= NA chr16 4354542 4416664 4354542 4416664 - ENST00000251166.8@CORO7 ENST00000251166.8 protein_coding 4416459,4413308,4412356,4408181,4407501,4405491,4395289,4388545,4387986,4365491,4365003,4364775,4364597,4364276,4362612,4361985,4361361,4361162,4360943,4360444,4360278,4359480,4359296,4358367,4357968,4357168,4355286,4354542 4416664,4413404,4412430,4408251,4407684,4405567,4395339,4388631,4388068,4365545,4365060,4364920,4364689,4364413,4362738,4362160,4361469,4361248,4361085,4360548,4360363,4359621,4359385,4358483,4358103,4357259,4355372,4355163 Gene ID= ENSG00000262246.5 TPM= 60.22 Transcript Type= protein_coding chr16 4371848 4383528 4371848 4383528 + ENST00000304735.3@VASN ENST00000304735.3 protein_coding 4371848,4380869 4371993,4383528 Gene ID= ENSG00000168140.4 TPM= 146.7 Transcript Type= protein_coding chr16 4425805 4456775 4425805 4456775 + ENST00000262375.10@DNAJA3 ENST00000262375.10 protein_coding 4425805,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4454811,4455546 4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4454927,4456775 Gene ID= ENSG00000103423.13 TPM= 64.75 Transcript Type= protein_coding chr16 4425860 4456775 4425860 4456775 + ENST00000355296.8@DNAJA3 ENST00000355296.8 protein_coding 4425860,4434384,4437402,4441375,4442268,4443017,4444664,4446886,4448733,4450400,4455546 4426092,4434517,4437485,4441575,4442420,4443164,4444728,4447014,4448848,4450497,4456775 Gene ID= ENSG00000103423.13 TPM= 184.28 Transcript Type= protein_coding chr16 4461679 4476290 4461679 4476290 - transcript1142.chr16.nic@NMRAL1 transcript1142.chr16.nic protein_coding 4476237,4474554,4474093,4469227,4466153,4463660,4461679 4476290,4474792,4474166,4469465,4466402,4463850,4461959 Gene ID= ENSG00000153406.13 TPM= 21.19 Transcript Type= NA chr16 4461680 4474895 4461680 4474895 - ENST00000283429.10@NMRAL1 ENST00000283429.10 protein_coding 4474554,4474093,4469227,4466153,4463660,4461680 4474895,4474166,4469465,4466402,4463850,4461959 Gene ID= ENSG00000153406.13 TPM= 18.47 Transcript Type= protein_coding chr16 4461679 4474634 4461679 4474634 - transcript1147.chr16.nic@NMRAL1 transcript1147.chr16.nic protein_coding 4474410,4474093,4469504,4466153,4463660,4461679 4474634,4474166,4469698,4466402,4463850,4461959 Gene ID= ENSG00000153406.13 TPM= 1.81 Transcript Type= NA chr16 4461679 4474641 4461679 4474641 - transcript1148.chr16.nic@NMRAL1 transcript1148.chr16.nic protein_coding 4474093,4469227,4466153,4463660,4461679 4474641,4469465,4466402,4463850,4461959 Gene ID= ENSG00000153406.13 TPM= 5.8 Transcript Type= NA chr16 4461694 4474622 4461694 4474622 - ENST00000404295.7@NMRAL1 ENST00000404295.7 protein_coding 4474410,4474093,4469227,4466153,4463660,4461694 4474622,4474166,4469465,4466402,4463850,4461959 Gene ID= ENSG00000153406.13 TPM= 10.32 Transcript Type= protein_coding chr16 4461695 4474643 4461695 4474643 - ENST00000574425.5@NMRAL1 ENST00000574425.5 protein_coding 4474423,4474093,4469227,4466153,4463660,4461695 4474643,4474166,4469465,4466402,4463850,4461959 Gene ID= ENSG00000153406.13 TPM= 6.7 Transcript Type= protein_coding chr16 4476393 4510346 4476393 4510346 + transcript1154.chr16.nnic@HMOX2 transcript1154.chr16.nnic protein_coding 4476393,4496146,4505484,4506895,4507713,4509412,4509629 4476487,4496266,4505610,4507012,4508204,4509538,4510346 Gene ID= ENSG00000103415.11 TPM= 14.49 Transcript Type= NA chr16 4510675 4538470 4510675 4538470 - ENST00000563332.6@CDIP1 ENST00000563332.6 protein_coding 4538325,4514575,4514046,4513696,4512791,4510675 4538470,4514664,4514144,4513851,4513064,4512683 Gene ID= ENSG00000089486.16 TPM= 45.73 Transcript Type= protein_coding chr16 4511324 4538784 4511324 4538784 - ENST00000567695.5@CDIP1 ENST00000567695.5 protein_coding 4538702,4514575,4514046,4513696,4512791,4511324 4538784,4514664,4514144,4513851,4513064,4512683 Gene ID= ENSG00000089486.16 TPM= 52.07 Transcript Type= protein_coding chr16 4608883 4614926 4608883 4614926 - ENST00000283474.11@UBALD1 ENST00000283474.11 protein_coding 4614678,4610493,4608883 4614926,4610555,4609983 Gene ID= ENSG00000153443.12 TPM= 21.73 Transcript Type= protein_coding chr16 4624792 4690970 4624792 4690970 + transcript1164.chr16.nic@MGRN1 transcript1164.chr16.nic protein_coding 4624792,4650365,4651963,4652678,4657246,4664709,4665102,4668265,4671391,4673498,4677463,4680032,4681550,4682823,4683224,4683843,4686259,4688796 4625048,4650483,4652051,4652824,4657363,4664775,4665151,4668312,4671459,4673657,4677572,4680097,4681776,4682946,4683269,4683932,4686303,4690970 Gene ID= ENSG00000102858.12 TPM= 7.24 Transcript Type= NA chr16 4624790 4690974 4624790 4690974 + ENST00000262370.11@MGRN1 ENST00000262370.11 protein_coding 4624790,4650365,4651963,4652678,4657246,4664709,4665102,4668265,4671391,4673498,4677463,4680032,4681550,4682823,4683224,4683843,4688796 4625048,4650483,4652051,4652824,4657363,4664775,4665151,4668312,4671459,4673657,4677572,4680097,4681776,4682946,4683269,4683932,4690974 Gene ID= ENSG00000102858.12 TPM= 19.02 Transcript Type= protein_coding chr16 4693694 4695859 4693694 4695859 + ENST00000304301.10@NUDT16L1 ENST00000304301.10 protein_coding 4693694,4693978,4694958 4693879,4694238,4695859 Gene ID= ENSG00000168101.14 TPM= 100.52 Transcript Type= protein_coding chr16 4693707 4695859 4693707 4695859 + ENST00000586536.1@NUDT16L1 ENST00000586536.1 protein_coding 4693707,4693978,4694958 4693879,4694308,4695859 Gene ID= ENSG00000168101.14 TPM= 9.96 Transcript Type= protein_coding chr16 4693718 4695855 4693718 4695855 + ENST00000405142.1@NUDT16L1 ENST00000405142.1 protein_coding 4693718,4693978 4693879,4695855 Gene ID= ENSG00000168101.14 TPM= 2.72 Transcript Type= protein_coding chr16 4696512 4734162 4696512 4734162 - ENST00000304283.8@ANKS3 ENST00000304283.8 protein_coding 4733938,4731512,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696512 4734162,4731579,4730151,4727177,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896 Gene ID= ENSG00000168096.14 TPM= 1.27 Transcript Type= protein_coding chr16 4696509 4734244 4696509 4734244 - transcript1182.chr16.nic@ANKS3 transcript1182.chr16.nic protein_coding 4734156,4731512,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696509 4734244,4731579,4730151,4727177,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896 Gene ID= ENSG00000168096.14 TPM= 2.17 Transcript Type= NA chr16 4696509 4734271 4696509 4734271 - transcript1185.chr16.nic@ANKS3 transcript1185.chr16.nic protein_coding 4734156,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696509 4734271,4730151,4727177,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896 Gene ID= ENSG00000168096.14 TPM= 13.95 Transcript Type= NA chr16 4696509 4734263 4696509 4734263 - transcript1186.chr16.nic@ANKS3 transcript1186.chr16.nic protein_coding 4734156,4729980,4726979,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696509 4734263,4730151,4727177,4726854,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896 Gene ID= ENSG00000168096.14 TPM= 4.89 Transcript Type= NA chr16 4696509 4734274 4696509 4734274 - transcript1187.chr16.nic@ANKS3 transcript1187.chr16.nic protein_coding 4734156,4729980,4726659,4724750,4714051,4705095,4702102,4701434,4700970,4699052,4698800,4698427,4697977,4697333,4697017,4696509 4734274,4730151,4726780,4724831,4714186,4705253,4702242,4701543,4701134,4699176,4698941,4698599,4698062,4697416,4697104,4696896 Gene ID= ENSG00000168096.14 TPM= 11.23 Transcript Type= NA chr16 4796962 4802926 4796962 4802926 - transcript1224.chr16.nnic@ROGDI transcript1224.chr16.nnic protein_coding 4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796962 4802926,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797861,4797501 Gene ID= ENSG00000067836.12 TPM= 18.74 Transcript Type= NA chr16 4796962 4802924 4796962 4802924 - transcript1228.chr16.nic@ROGDI transcript1228.chr16.nic protein_coding 4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796962 4802924,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501 Gene ID= ENSG00000067836.12 TPM= 5.32 Transcript Type= NA chr16 4796962 4802319 4796962 4802319 - transcript1236.chr16.nic@ROGDI transcript1236.chr16.nic protein_coding 4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796962 4802319,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501 Gene ID= ENSG00000067836.12 TPM= 8.94 Transcript Type= NA chr16 4796962 4802926 4796962 4802926 - transcript1237.chr16.nic@ROGDI transcript1237.chr16.nic protein_coding 4802527,4802382,4800498,4799686,4798569,4798071,4797938,4797714,4796962 4802926,4802453,4801585,4799781,4798667,4798184,4797987,4797840,4797501 Gene ID= ENSG00000067836.12 TPM= 6.41 Transcript Type= NA chr16 4796968 4802950 4796968 4802950 - ENST00000322048.11@ROGDI ENST00000322048.11 protein_coding 4802527,4802382,4801503,4801267,4800498,4799686,4798569,4798071,4797938,4797714,4796968 4802950,4802453,4801585,4801321,4800578,4799781,4798667,4798184,4797987,4797840,4797501 Gene ID= ENSG00000067836.12 TPM= 128.47 Transcript Type= protein_coding chr16 4796969 4802162 4796969 4802162 - ENST00000591292.5@ROGDI ENST00000591292.5 protein_coding 4800498,4799686,4798569,4798071,4797938,4797714,4796969 4802162,4799781,4798667,4798184,4797987,4797840,4797501 Gene ID= ENSG00000067836.12 TPM= 6.41 Transcript Type= retained_intron chr16 4796969 4802633 4796969 4802633 - ENST00000587843.5@ROGDI ENST00000587843.5 protein_coding 4802527,4802382,4801503,4800498,4799686,4798569,4798071,4797938,4797714,4796969 4802633,4802453,4801585,4800578,4799781,4798667,4798184,4797987,4797840,4797501 Gene ID= ENSG00000067836.12 TPM= 7.13 Transcript Type= nonsense_mediated_decay chr16 4803203 4847292 4803203 4847292 - transcript1204.chr16.nic@GLYR1 transcript1204.chr16.nic protein_coding 4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203 4847292,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814629,4813838,4812248,4811802,4811294,4805310,4804148 Gene ID= ENSG00000140632.16 TPM= 5.34 Transcript Type= NA chr16 4803203 4847278 4803203 4847278 - transcript1212.chr16.nic@GLYR1 transcript1212.chr16.nic protein_coding 4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4804522,4803203 4847278,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310,4804148 Gene ID= ENSG00000140632.16 TPM= 3.53 Transcript Type= NA chr16 4803203 4847342 4803203 4847342 - ENST00000321919.13@GLYR1 ENST00000321919.13 protein_coding 4847228,4846174,4845074,4832774,4831979,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203 4847342,4846210,4845153,4832912,4832221,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310 Gene ID= ENSG00000140632.16 TPM= 69.11 Transcript Type= protein_coding chr16 4803203 4847279 4803203 4847279 - ENST00000436648.9@GLYR1 ENST00000436648.9 protein_coding 4847228,4846174,4845074,4832774,4823821,4822875,4821547,4821380,4817598,4814537,4813737,4812086,4811623,4811170,4803203 4847279,4846210,4845153,4832912,4823907,4822931,4821597,4821453,4817697,4814647,4813838,4812248,4811802,4811294,4805310 Gene ID= ENSG00000140632.16 TPM= 11.16 Transcript Type= protein_coding chr16 4847442 4882359 4847442 4882359 + transcript1203.chr16.nic@UBN1 transcript1203.chr16.nic protein_coding 4847442,4852879,4857990,4858568,4859025,4859865,4860664,4868833,4870212,4870516,4870844,4872884,4873031,4874211,4876871,4877385,4880083 4848210,4853166,4858076,4858663,4859159,4859968,4861102,4868903,4870341,4870634,4870972,4872934,4873073,4875434,4877111,4877474,4882359 Gene ID= ENSG00000118900.14 TPM= 14.49 Transcript Type= NA chr16 4847631 4882360 4847631 4882360 + ENST00000262376.10@UBN1 ENST00000262376.10 protein_coding 4847631,4852879,4857990,4858568,4859025,4859865,4860664,4868833,4870212,4870516,4870844,4871155,4872884,4873031,4874211,4876871,4877385,4880083 4848210,4853166,4858076,4858663,4859159,4859968,4861102,4868903,4870341,4870634,4870972,4871301,4872934,4873073,4875434,4877111,4877474,4882360 Gene ID= ENSG00000118900.14 TPM= 12.68 Transcript Type= protein_coding chr16 4882507 4937135 4882507 4937135 - ENST00000345988.6@PPL ENST00000345988.6 protein_coding 4936984,4910850,4903886,4902406,4900964,4900830,4899223,4899013,4897675,4895594,4895261,4894467,4893541,4893213,4892035,4891811,4890728,4890184,4888978,4888102,4887135,4882507 4937135,4910949,4904040,4902526,4901089,4900871,4899384,4899120,4897770,4895716,4895407,4894618,4893638,4893370,4892213,4891949,4890921,4890334,4889061,4888218,4887227,4886047 Gene ID= ENSG00000118898.15 TPM= 15.39 Transcript Type= protein_coding chr16 5024846 5033950 5024846 5033950 - transcript1263.chr16.nnic@NAGPA transcript1263.chr16.nnic protein_coding 5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027338,5027135,5024846 5033950,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685 Gene ID= ENSG00000103174.11 TPM= 2.04 Transcript Type= NA chr16 5024846 5033926 5024846 5033926 - transcript1266.chr16.nic@NAGPA transcript1266.chr16.nic protein_coding 5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024846 5033926,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685 Gene ID= ENSG00000103174.11 TPM= 2.94 Transcript Type= NA chr16 5024846 5033950 5024846 5033950 - transcript1269.chr16.nic@NAGPA transcript1269.chr16.nic protein_coding 5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027135,5024846 5033950,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5025685 Gene ID= ENSG00000103174.11 TPM= 2.04 Transcript Type= NA chr16 5024844 5033934 5024844 5033934 - ENST00000312251.7@NAGPA ENST00000312251.7 protein_coding 5033829,5033273,5031745,5030385,5028880,5027980,5027846,5027278,5027135,5024844 5033934,5033728,5031884,5030493,5029008,5028185,5027893,5027379,5027198,5025685 Gene ID= ENSG00000103174.11 TPM= 49.13 Transcript Type= protein_coding chr16 5071819 5085587 5071819 5085587 + ENST00000262374.9@ALG1 ENST00000262374.9 protein_coding 5071819,5072951,5073153,5075388,5077445,5077907,5078757,5079064,5079748,5080946,5082559,5083682,5084750 5072057,5073028,5073256,5075536,5077534,5078017,5078878,5079102,5079807,5081056,5082673,5083757,5085587 Gene ID= ENSG00000033011.11 TPM= 100.06 Transcript Type= protein_coding chr16 5044122 5066040 5044122 5066040 - ENST00000472572.7@C16orf89 ENST00000472572.7 protein_coding 5065701,5062425,5060286,5058493,5056053,5055246,5047878,5044122 5066040,5062574,5060436,5058610,5056188,5055350,5047964,5044478 Gene ID= ENSG00000153446.15 TPM= 4.53 Transcript Type= protein_coding chr16 5084310 5097754 5084310 5097754 - transcript1281.chr16.nic@EEF2KMT transcript1281.chr16.nic protein_coding 5097644,5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084310 5097754,5097353,5095514,5093564,5091895,5090565,5090349,5089256,5085732 Gene ID= ENSG00000118894.14 TPM= 3.17 Transcript Type= NA chr16 5084309 5097858 5084309 5097858 - transcript1283.chr16.nic@EEF2KMT transcript1283.chr16.nic protein_coding 5097280,5095452,5093484,5091794,5090432,5090084,5089107,5084309 5097858,5095514,5093564,5091895,5090565,5090349,5089256,5085732 Gene ID= ENSG00000118894.14 TPM= 3.17 Transcript Type= NA chr16 5085078 5097794 5085078 5097794 - transcript1289.chr16.nic@EEF2KMT transcript1289.chr16.nic protein_coding 5097644,5095452,5091794,5090432,5090084,5089107,5085078 5097794,5095514,5091895,5090565,5090349,5089256,5085732 Gene ID= ENSG00000118894.14 TPM= 3.17 Transcript Type= NA chr16 5084304 5097808 5084304 5097808 - ENST00000427587.8@EEF2KMT ENST00000427587.8 protein_coding 5097644,5095452,5093484,5091794,5090432,5090084,5089107,5084304 5097808,5095514,5093564,5091895,5090565,5090349,5089256,5085732 Gene ID= ENSG00000118894.14 TPM= 13.13 Transcript Type= protein_coding chr16 5084304 5097788 5084304 5097788 - ENST00000458008.8@EEF2KMT ENST00000458008.8 protein_coding 5097644,5095452,5093484,5090432,5090084,5089107,5084304 5097788,5095514,5093564,5090565,5090349,5089256,5085732 Gene ID= ENSG00000118894.14 TPM= 5.89 Transcript Type= protein_coding chr16 8621691 8646224 8621691 8646224 + ENST00000163678.11@METTL22 ENST00000163678.11 protein_coding 8621691,8625496,8628730,8635168,8639091,8641131,8642127,8642463,8644557,8646108 8621775,8625798,8629110,8635312,8639162,8641184,8642207,8642565,8644725,8646224 Gene ID= ENSG00000067365.14 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr16 8674565 8784575 8674565 8784575 + ENST00000268251.12@ABAT ENST00000268251.12 protein_coding 8674565,8735699,8746001,8748108,8750422,8757757,8764069,8764738,8766208,8768193,8768825,8772780,8774890,8776344,8779479,8781309 8674711,8735809,8746098,8748137,8750539,8757806,8764149,8764830,8766270,8768256,8768973,8772917,8775057,8776490,8779590,8784575 Gene ID= ENSG00000183044.11 TPM= 15.39 Transcript Type= protein_coding chr16 8797817 8849331 8797817 8849331 + ENST00000268261.8@PMM2 ENST00000268261.8 protein_coding 8797817,8801799,8804767,8806316,8811079,8811638,8812991,8847724 8797948,8801910,8804843,8806407,8811178,8811713,8813106,8849331 Gene ID= ENSG00000140650.11 TPM= 35.32 Transcript Type= protein_coding chr16 8852943 8868645 8852943 8868645 - transcript1317.chr16.nnic@CARHSP1 transcript1317.chr16.nnic protein_coding 8866422,8859171,8858350,8852943 8868645,8859335,8858472,8855326 Gene ID= ENSG00000153048.10 TPM= 15.5 Transcript Type= NA chr16 8852942 8868401 8852942 8868401 - ENST00000396593.6@CARHSP1 ENST00000396593.6 protein_coding 8868049,8859171,8858350,8852942 8868401,8859335,8858472,8855326 Gene ID= ENSG00000153048.10 TPM= 17.77 Transcript Type= protein_coding chr16 8854913 8869009 8854913 8869009 - ENST00000311052.9@CARHSP1 ENST00000311052.9 protein_coding 8868966,8859171,8858350,8854913 8869009,8859335,8858472,8855326 Gene ID= ENSG00000153048.10 TPM= 121.3 Transcript Type= protein_coding chr16 8854921 8868361 8854921 8868361 - ENST00000561530.5@CARHSP1 ENST00000561530.5 protein_coding 8868327,8859171,8858350,8854921 8868361,8859335,8858472,8855326 Gene ID= ENSG00000153048.10 TPM= 8.78 Transcript Type= protein_coding chr16 8892773 8963966 8892773 8963966 - transcript1327.chr16.nic@USP7 transcript1327.chr16.nic protein_coding 8963207,8930293,8929369,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8900990,8900530,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892773 8963966,8930397,8929543,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8900630,8899757,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104 Gene ID= ENSG00000187555.14 TPM= 3.92 Transcript Type= NA chr16 8892773 8963952 8892773 8963952 - transcript1329.chr16.nnic@USP7 transcript1329.chr16.nnic protein_coding 8963709,8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8900990,8900530,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892773 8963952,8963426,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8900630,8899757,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104 Gene ID= ENSG00000187555.14 TPM= 3.02 Transcript Type= NA chr16 8892783 8963966 8892783 8963966 - transcript1336.chr16.nic@USP7 transcript1336.chr16.nic protein_coding 8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892783 8963966,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104 Gene ID= ENSG00000187555.14 TPM= 4.53 Transcript Type= NA chr16 8892094 8963484 8892094 8963484 - ENST00000344836.8@USP7 ENST00000344836.8 protein_coding 8963207,8930293,8923215,8921157,8920359,8919031,8917026,8916502,8915445,8915254,8910745,8908341,8906426,8905187,8904435,8903268,8902381,8902082,8901142,8900990,8900530,8899604,8899121,8898531,8898360,8896999,8895642,8895031,8894784,8894550,8892094 8963484,8930397,8923413,8921295,8920447,8919139,8917156,8916556,8915525,8915344,8910827,8908450,8906582,8905331,8904565,8903402,8902482,8902187,8901234,8901057,8900630,8899757,8899188,8898639,8898437,8897099,8895741,8895150,8894855,8894640,8894104 Gene ID= ENSG00000187555.14 TPM= 12.98 Transcript Type= protein_coding chr16 9091648 9121640 9091648 9121640 + ENST00000327827.11@C16orf72 ENST00000327827.11 protein_coding 9091648,9092921,9102984,9116668 9092270,9093001,9103259,9121640 Gene ID= ENSG00000182831.11 TPM= 45.28 Transcript Type= protein_coding chr16 10386055 10483638 10386055 10483638 + ENST00000396560.6@ATF7IP2 ENST00000396560.6 protein_coding 10386055,10428868,10430611,10433525,10438101,10440364,10457372,10472110,10473479,10473923,10480879,10481836 10386122,10429016,10431455,10433649,10438235,10440462,10457529,10472183,10473534,10473989,10480964,10483638 Gene ID= ENSG00000166669.13 TPM= 5.43 Transcript Type= protein_coding chr16 10386058 10387741 10386058 10387741 + ENST00000566316.5@ATF7IP2 ENST00000566316.5 protein_coding 10386058,10387144,10387378 10386122,10387290,10387741 Gene ID= ENSG00000166669.13 TPM= 24.45 Transcript Type= retained_intron chr16 10743820 10769351 10743820 10769351 + transcript1351.chr16.nic@NUBP1 transcript1351.chr16.nic protein_coding 10743820,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10769047 10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10769351 Gene ID= ENSG00000103274.10 TPM= 2.49 Transcript Type= NA chr16 10743820 10769352 10743820 10769352 + transcript1353.chr16.nic@NUBP1 transcript1353.chr16.nic protein_coding 10743820,10743961,10747143,10755721,10756690,10757873,10761364,10761757,10767949,10769047 10743882,10744065,10747276,10755753,10756780,10758027,10761474,10761859,10768032,10769352 Gene ID= ENSG00000103274.10 TPM= 2.49 Transcript Type= NA chr16 10743845 10769351 10743845 10769351 + ENST00000283027.9@NUBP1 ENST00000283027.9 protein_coding 10743845,10743961,10747143,10752610,10755721,10756690,10757873,10761364,10761757,10767949,10769047 10743882,10744065,10747276,10752678,10755753,10756780,10758027,10761474,10761859,10768032,10769351 Gene ID= ENSG00000103274.10 TPM= 36 Transcript Type= protein_coding chr16 10743855 10769351 10743855 10769351 + ENST00000433392.6@NUBP1 ENST00000433392.6 protein_coding 10743855,10743961,10747143,10752610,10756690,10757873,10761364,10761757,10767949,10769047 10743882,10744065,10747276,10752678,10756780,10758027,10761474,10761859,10768032,10769351 Gene ID= ENSG00000103274.10 TPM= 1.58 Transcript Type= protein_coding chr16 10928891 10942460 10928891 10942460 - ENST00000331808.4@DEXI ENST00000331808.4 protein_coding 10941569,10928891 10942460,10929559 Gene ID= ENSG00000182108.9 TPM= 203.75 Transcript Type= protein_coding chr16 10940719 10943021 10940719 10943021 + ENST00000573379.1@AC133065.2 ENST00000573379.1 antisense_RNA 10940719,10941186 10941029,10943021 Gene ID= ENSG00000262222.1 TPM= 1.81 Transcript Type= antisense_RNA chr16 10944488 11182189 10944488 11182189 + ENST00000409790.5@CLEC16A ENST00000409790.5 protein_coding 10944488,10957782,10962455,10969161,10971125,10972554,10972938,10977225,10979329,10982878,11003074,11020193,11024821,11039754,11042254,11044028,11047292,11051513,11060902,11120615,11123742,11125979,11166388,11178335 10944797,10957910,10962588,10969309,10971230,10972559,10973061,10977399,10979382,10982991,11003305,11020325,11024921,11039876,11042363,11044072,11047342,11051641,11061022,11120766,11123946,11126146,11166552,11182189 Gene ID= ENSG00000038532.14 TPM= 9.06 Transcript Type= protein_coding chr16 11254405 11256179 11254405 11256179 - ENST00000332029.2@SOCS1 ENST00000332029.2 protein_coding 11256079,11254405 11256179,11255528 Gene ID= ENSG00000185338.4 TPM= 7.24 Transcript Type= protein_coding chr16 11345431 11351762 11345431 11351762 + ENST00000312499.5@RMI2 ENST00000312499.5 protein_coding 11345431,11350642 11345766,11351762 Gene ID= ENSG00000175643.8 TPM= 1.81 Transcript Type= protein_coding chr16 11547726 11586950 11547726 11586950 - ENST00000622633.4@LITAF ENST00000622633.4 protein_coding 11586886,11556511,11553533,11547726 11586950,11556735,11553689,11549745 Gene ID= ENSG00000189067.12 TPM= 103.23 Transcript Type= protein_coding chr16 11668414 11679159 11668414 11679159 + ENST00000329565.5@SNN ENST00000329565.5 protein_coding 11668414,11675975 11668540,11679159 Gene ID= ENSG00000184602.5 TPM= 163.9 Transcript Type= protein_coding chr16 11679081 11742855 11679081 11742855 - transcript1378.chr16.nnic@TXNDC11 transcript1378.chr16.nnic protein_coding 11742477,11736017,11733982,11721577,11714354,11700452,11698125,11691290,11688303,11687857,11684165,11679081 11742855,11736233,11734079,11721670,11714473,11700564,11698325,11692082,11688445,11687966,11684245,11679837 Gene ID= ENSG00000153066.12 TPM= 2.54 Transcript Type= NA chr16 11679081 11742855 11679081 11742855 - transcript1382.chr16.nic@TXNDC11 transcript1382.chr16.nic protein_coding 11742477,11736017,11733982,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679081 11742855,11736233,11734079,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837 Gene ID= ENSG00000153066.12 TPM= 7.97 Transcript Type= NA chr16 11679081 11742819 11679081 11742819 - transcript1383.chr16.nic@TXNDC11 transcript1383.chr16.nic protein_coding 11742477,11736017,11733982,11730645,11721577,11698125,11691290,11688303,11687857,11684165,11679081 11742819,11736233,11734079,11730774,11721670,11698325,11692082,11688445,11687966,11684245,11679837 Gene ID= ENSG00000153066.12 TPM= 3.44 Transcript Type= NA chr16 11679081 11742860 11679081 11742860 - transcript1386.chr16.nic@TXNDC11 transcript1386.chr16.nic protein_coding 11742477,11736017,11733982,11721577,11698125,11691290,11688303,11687857,11684165,11679081 11742860,11736233,11734079,11721670,11698325,11692082,11688445,11687966,11684245,11679837 Gene ID= ENSG00000153066.12 TPM= 7.06 Transcript Type= NA chr16 11679080 11742878 11679080 11742878 - ENST00000283033.9@TXNDC11 ENST00000283033.9 protein_coding 11742477,11736017,11733982,11730645,11721577,11700452,11698125,11691290,11688303,11687857,11684165,11679080 11742878,11736233,11734079,11730774,11721670,11700564,11698325,11692082,11688445,11687966,11684245,11679837 Gene ID= ENSG00000153066.12 TPM= 53.25 Transcript Type= protein_coding chr16 11750586 11797267 11750586 11797267 - ENST00000355758.8@ZC3H7A ENST00000355758.8 protein_coding 11797124,11782287,11781425,11779166,11776751,11776452,11776320,11774980,11774236,11770783,11769031,11768315,11767417,11765489,11765053,11763478,11762671,11761910,11761406,11758431,11756237,11752669,11750586 11797267,11782388,11781464,11779363,11776909,11776532,11776358,11775013,11774519,11770987,11769095,11768501,11767578,11765685,11765153,11763659,11762747,11762043,11761511,11758539,11756370,11752832,11751506 Gene ID= ENSG00000122299.11 TPM= 80.59 Transcript Type= protein_coding chr16 11833850 11851585 11833850 11851585 - ENST00000571133.5@RSL1D1 ENST00000571133.5 protein_coding 11851408,11850279,11847668,11846695,11846501,11841907,11841695,11839695,11833850 11851585,11850418,11847806,11846843,11846602,11842000,11841820,11839985,11838113 Gene ID= ENSG00000171490.12 TPM= 61.12 Transcript Type= protein_coding chr16 12659799 12804017 12659799 12804017 - ENST00000381774.8@CPPED1 ENST00000381774.8 protein_coding 12803707,12781185,12704624,12659799 12804017,12781403,12705049,12665115 Gene ID= ENSG00000103381.11 TPM= 33.51 Transcript Type= protein_coding chr16 12663487 12803851 12663487 12803851 - ENST00000433677.6@CPPED1 ENST00000433677.6 protein_coding 12803707,12781185,12663487 12803851,12781403,12665115 Gene ID= ENSG00000103381.11 TPM= 3.62 Transcript Type= protein_coding chr16 13920143 13937370 13920143 13937370 + transcript1428.chr16.nic@ERCC4 transcript1428.chr16.nic protein_coding 13920143,13922031,13926561,13928028,13930710,13932157,13934192,13935146 13920372,13922211,13926756,13928235,13930890,13932285,13934302,13937370 Gene ID= ENSG00000175595.14 TPM= 4.53 Transcript Type= NA chr16 14001200 14016025 14001200 14016025 - transcript1437.chr16.nnic@LINC02185 transcript1437.chr16.nnic lincRNA 14015862,14013372,14001200 14016025,14013458,14002689 Gene ID= ENSG00000262097.1 TPM= 1.81 Transcript Type= NA chr16 14435701 14630293 14435701 14630293 - transcript1447.chr16.nnic@PARN transcript1447.chr16.nnic protein_coding 14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14552021,14482638,14446888,14435701 14630293,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14552095,14482827,14447081,14436772 Gene ID= ENSG00000140694.16 TPM= 1.81 Transcript Type= NA chr16 14435701 14630267 14435701 14630267 - ENST00000437198.6@PARN ENST00000437198.6 protein_coding 14630107,14629597,14628172,14627269,14627106,14617590,14610644,14609058,14608281,14606484,14604146,14599904,14593301,14586318,14584749,14584347,14582181,14580874,14555654,14554065,14552021,14482638,14446888,14435701 14630267,14629674,14628251,14627336,14627187,14617650,14610809,14609123,14608319,14606526,14604226,14599960,14593378,14586361,14584791,14584422,14582291,14580943,14555709,14554151,14552095,14482827,14447081,14436772 Gene ID= ENSG00000140694.16 TPM= 39.84 Transcript Type= protein_coding chr16 14632929 14669235 14632929 14669235 + transcript1456.chr16.nic@BFAR transcript1456.chr16.nic protein_coding 14632929,14644274,14649804,14655066,14661892,14664869,14667635 14633018,14644609,14649973,14655210,14662065,14665071,14669235 Gene ID= ENSG00000103429.10 TPM= 3.62 Transcript Type= NA chr16 14632920 14669235 14632920 14669235 + transcript1457.chr16.nic@BFAR transcript1457.chr16.nic protein_coding 14632920,14644274,14648388,14661892,14664869,14667635 14633018,14644609,14648592,14662065,14665071,14669235 Gene ID= ENSG00000103429.10 TPM= 2.72 Transcript Type= NA chr16 14632920 14669235 14632920 14669235 + transcript1459.chr16.nic@BFAR transcript1459.chr16.nic protein_coding 14632920,14644274,14661892,14664869,14667635 14633018,14644609,14662065,14665071,14669235 Gene ID= ENSG00000103429.10 TPM= 5.43 Transcript Type= NA chr16 14632815 14669236 14632815 14669236 + ENST00000261658.6@BFAR ENST00000261658.6 protein_coding 14632815,14644274,14648388,14649804,14655066,14661892,14664869,14667635 14633018,14644609,14648592,14649973,14655210,14662065,14665071,14669236 Gene ID= ENSG00000103429.10 TPM= 34.41 Transcript Type= protein_coding chr16 14632932 14650589 14632932 14650589 + ENST00000562442.5@BFAR ENST00000562442.5 protein_coding 14632932,14644274,14648388,14649804 14633018,14644609,14648592,14650589 Gene ID= ENSG00000103429.10 TPM= 9.06 Transcript Type= protein_coding chr16 14833681 14896160 14833681 14896160 + ENST00000287667.11@NOMO1 ENST00000287667.11 protein_coding 14833681,14838407,14841362,14844674,14846577,14848899,14852430,14853467,14853937,14857217,14857505,14863013,14864585,14865024,14866555,14868548,14871621,14872234,14875036,14875340,14876359,14876664,14878721,14880015,14881544,14882594,14884372,14886761,14889096,14894998,14895514 14834016,14838496,14841407,14844774,14846683,14848971,14852582,14853604,14854026,14857322,14857655,14863187,14864726,14865155,14866691,14868635,14871684,14872329,14875254,14875422,14876518,14876790,14878834,14880142,14881685,14882677,14884482,14886862,14889215,14895090,14896160 Gene ID= ENSG00000103512.14 TPM= 201.03 Transcript Type= protein_coding chr16 14911423 14952072 14911423 14952072 + transcript1473.chr16.nnic@AC138932.1 transcript1473.chr16.nnic transcribed_unprocessed_pseudogene 14911423,14917540,14917733,14918073,14918455,14919245,14919863,14920272,14920798,14921280,14922001,14923655,14923977,14924505,14925101,14925733,14926004,14926377,14926657,14927207,14928381,14929251,14929520,14930166,14930503,14930880,14932571,14932828,14933066,14933367,14935160,14937565,14941812,14945574,14945837,14948930,14950050,14950220,14950752,14951615 14911907,14917611,14917804,14918242,14919126,14919428,14920083,14920387,14920924,14921527,14922756,14923786,14924152,14924638,14925189,14925876,14926283,14926590,14926816,14927359,14928525,14929421,14929870,14930322,14930755,14931075,14932741,14932971,14933276,14933493,14935397,14937650,14941940,14945673,14945981,14949037,14950110,14950255,14950821,14952072 Gene ID= ENSG00000183458.13 TPM= 8.15 Transcript Type= NA chr16 14975067 15037684 14975067 15037684 + transcript1490.chr16.nnic@PDXDC1 transcript1490.chr16.nnic protein_coding 14975067,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15035951 14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15037684 Gene ID= ENSG00000179889.18 TPM= 4.23 Transcript Type= NA chr16 14975103 15038332 14975103 15038332 + ENST00000396410.8@PDXDC1 ENST00000396410.8 protein_coding 14975103,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15032861,15033278,15034286,15034457,15035449,15036016 14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15031906,15032979,15033399,15034378,15034553,15035553,15038332 Gene ID= ENSG00000179889.18 TPM= 79.84 Transcript Type= protein_coding chr16 14975105 15037687 14975105 15037687 + ENST00000570001.5@PDXDC1 ENST00000570001.5 protein_coding 14975105,14997753,14998340,15001776,15004187,15006394,15008779,15009681,15016129,15017120,15017321,15018840,15022704,15026643,15028878,15029951,15031735,15033278,15034286,15034457,15035449,15036016 14975220,14997826,14998405,15001856,15004333,15006583,15008847,15009759,15016213,15017168,15017422,15018965,15022754,15026706,15028966,15030056,15032979,15033399,15034378,15034553,15035553,15037687 Gene ID= ENSG00000179889.18 TPM= 5.59 Transcript Type= retained_intron chr16 15037854 15055803 15037854 15055803 - transcript1512.chr16.nnic@NTAN1 transcript1512.chr16.nnic protein_coding 15055655,15047997,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037854 15055803,15048099,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210 Gene ID= ENSG00000157045.8 TPM= 2.11 Transcript Type= NA chr16 15037854 15055813 15037854 15055813 - transcript1513.chr16.nic@NTAN1 transcript1513.chr16.nic protein_coding 15055741,15047997,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037854 15055813,15048099,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210 Gene ID= ENSG00000157045.8 TPM= 2.11 Transcript Type= NA chr16 15037854 15056079 15037854 15056079 - ENST00000622833.4@NTAN1 ENST00000622833.4 protein_coding 15055891,15047442,15044334,15041623,15041068,15039969,15038574,15037854 15056079,15047550,15044407,15041676,15041121,15040066,15038687,15038210 Gene ID= ENSG00000157045.8 TPM= 2.72 Transcript Type= protein_coding chr16 15037853 15056064 15037853 15056064 - ENST00000287706.7@NTAN1 ENST00000287706.7 protein_coding 15055891,15047997,15047855,15047442,15044334,15041623,15041068,15039969,15038574,15037853 15056064,15048099,15047920,15047550,15044407,15041676,15041121,15040066,15038687,15038210 Gene ID= ENSG00000157045.8 TPM= 37.43 Transcript Type= protein_coding chr16 15060026 15094251 15060026 15094251 - transcript1506.chr16.nnic@RRN3 transcript1506.chr16.nnic protein_coding 15094145,15092509,15091315,15086365,15086129,15085639,15084642,15079998,15076558,15074723,15072950,15071121,15070070,15068169,15065219,15063196,15060026 15094251,15092614,15091371,15086454,15086258,15085698,15084705,15080096,15076650,15074861,15073080,15071251,15070254,15068277,15065371,15063283,15061905 Gene ID= ENSG00000085721.12 TPM= 1.81 Transcript Type= NA chr16 15060022 15094317 15060022 15094317 - ENST00000198767.10@RRN3 ENST00000198767.10 protein_coding 15094145,15092509,15091315,15086365,15086129,15085639,15084642,15083513,15079998,15076558,15074723,15072950,15071121,15070070,15068169,15065219,15063196,15060022 15094317,15092614,15091371,15086454,15086258,15085698,15084705,15083582,15080096,15076650,15074861,15073080,15071251,15070254,15068277,15065371,15063283,15061905 Gene ID= ENSG00000085721.12 TPM= 28.98 Transcript Type= protein_coding chr16 15434295 15588259 15434295 15588259 + ENST00000300006.8@C16orf45 ENST00000300006.8 protein_coding 15434295,15515305,15567983,15581217,15583156,15586717 15434759,15515428,15568056,15581331,15583238,15588259 Gene ID= ENSG00000166780.10 TPM= 28.07 Transcript Type= protein_coding chr16 15434478 15588258 15434478 15588258 + transcript1527.chr16.nic@C16orf45 transcript1527.chr16.nic protein_coding 15434478,15515305,15567983,15581217,15583156,15587496 15434759,15515428,15568056,15581331,15583238,15588258 Gene ID= ENSG00000166780.10 TPM= 2.72 Transcript Type= NA chr16 15594386 15643166 15594386 15643166 - ENST00000396368.7@MARF1 ENST00000396368.7 protein_coding 15643018,15639090,15635656,15634757,15633617,15631381,15630332,15625372,15625016,15624769,15622934,15621733,15620451,15617299,15617052,15615830,15612557,15611592,15610975,15609523,15608291,15604168,15601991,15600641,15600428,15598854,15594386 15643166,15639291,15636342,15634931,15633843,15631498,15630504,15625800,15625173,15624927,15623123,15621911,15620531,15617535,15617171,15616005,15612777,15611734,15611108,15609725,15608518,15604398,15602203,15600701,15600553,15599024,15596937 Gene ID= ENSG00000166783.21 TPM= 5.43 Transcript Type= protein_coding chr16 15650227 15701912 15650227 15701912 + transcript1530.chr16.nic@NDE1 transcript1530.chr16.nic protein_coding 15650227,15664736,15667286,15677801,15687375,15691144,15694165,15696709,15699597 15650294,15664861,15667439,15677949,15687511,15691323,15694256,15696860,15701912 Gene ID= ENSG00000072864.14 TPM= 3.17 Transcript Type= NA chr16 15650227 15701913 15650227 15701913 + transcript1531.chr16.nic@NDE1 transcript1531.chr16.nic protein_coding 15650227,15664736,15667286,15677801,15687375,15691144,15694165,15696709,15699729 15650294,15664861,15667439,15677949,15687511,15691323,15694256,15696860,15701913 Gene ID= ENSG00000072864.14 TPM= 2.26 Transcript Type= NA chr16 15703172 15857011 15703172 15857011 - ENST00000396324.7@MYH11 ENST00000396324.7 protein_coding 15856941,15837908,15823255,15798660,15786630,15784698,15782385,15778780,15776078,15771569,15763796,15760540,15759576,15757827,15756341,15753394,15750138,15748047,15747874,15747570,15745129,15741760,15741463,15740051,15738565,15737449,15735366,15732564,15726848,15724888,15724647,15724161,15721422,15720839,15720151,15719585,15719220,15718315,15717140,15715164,15714909,15703172 15857011,15838269,15823411,15798687,15786732,15784718,15782477,15778843,15776176,15771712,15763891,15760658,15759728,15758000,15756514,15753508,15750331,15748168,15747943,15747730,15745237,15741891,15741669,15740188,15738688,15737620,15735578,15732708,15727054,15724992,15724799,15724409,15721634,15721051,15720312,15719713,15719308,15718438,15717348,15715272,15715081,15704123 Gene ID= ENSG00000133392.17 TPM= 12.68 Transcript Type= protein_coding chr16 15865720 15888615 15865720 15888615 - ENST00000255759.10@FOPNL ENST00000255759.10 protein_coding 15888558,15884008,15879804,15873491,15865720 15888615,15884205,15879888,15873627,15867516 Gene ID= ENSG00000133393.12 TPM= 76.07 Transcript Type= protein_coding chr16 15949628 16143071 15949628 16143071 + transcript1542.chr16.nnic@ABCC1 transcript1542.chr16.nnic protein_coding 15949628,16007816,16009776,16014491,16016496,16033109,16036472,16044450,16045836,16048142,16052724,16056092,16068156,16071642,16076326,16079352,16086824,16090405,16102627,16106738,16111375,16114766,16121975,16124789,16125810,16131789,16134350,16136478,16138364,16141173 15949799,16007992,16009901,16014628,16016621,16033170,16036603,16044680,16046013,16048303,16052816,16056295,16068302,16071729,16076401,16079478,16086991,16090588,16102717,16106873,16111582,16115076,16122174,16124915,16125911,16131935,16134508,16136644,16138558,16143071 Gene ID= ENSG00000103222.18 TPM= 4.53 Transcript Type= NA chr16 15949577 16143062 15949577 16143062 + ENST00000399410.7@ABCC1 ENST00000399410.7 protein_coding 15949577,16007816,16009776,16014491,16016496,16033109,16036472,16044450,16045836,16048142,16052724,16056092,16068156,16071642,16076326,16079352,16083366,16086824,16090405,16102627,16106738,16111375,16114766,16121975,16124789,16125810,16131789,16134350,16136478,16138364,16141173 15949799,16007992,16009901,16014628,16016621,16033170,16036603,16044680,16046013,16048303,16052816,16056295,16068302,16071729,16076401,16079478,16083542,16086991,16090588,16102717,16106873,16111582,16115076,16122174,16124915,16125911,16131935,16134508,16136644,16138558,16143062 Gene ID= ENSG00000103222.18 TPM= 14.49 Transcript Type= protein_coding chr16 16232495 16294814 16232495 16294814 + ENST00000399336.8@NOMO3 ENST00000399336.8 protein_coding 16232495,16236901,16239851,16243161,16245068,16247395,16250928,16251963,16252433,16255720,16256008,16261502,16263074,16263513,16265043,16267044,16270121,16270733,16273689,16273993,16275012,16275317,16277370,16278662,16280189,16281239,16283016,16285405,16287743,16293652,16294168 16232831,16236990,16239896,16243261,16245174,16247467,16251080,16252100,16252522,16255825,16256158,16261676,16263215,16263644,16265179,16267131,16270184,16270828,16273907,16274075,16275171,16275443,16277483,16278789,16280330,16281322,16283126,16285506,16287862,16293744,16294814 Gene ID= ENSG00000103226.17 TPM= 95.99 Transcript Type= protein_coding chr16 16310134 16350605 16310134 16350605 + transcript1557.chr16.nnic@AC138969.1 transcript1557.chr16.nnic protein_coding 16310134,16316191,16316384,16316724,16317106,16317896,16318514,16318923,16319449,16319931,16320652,16322306,16322628,16323156,16324384,16324655,16325028,16325308,16325858,16326865,16327736,16328005,16328651,16328988,16329365,16331058,16331315,16331553,16331854,16333647,16333814,16336052,16340306,16344045,16344308,16347403,16348527,16348697,16350092 16310562,16316262,16316455,16316893,16317777,16318079,16318734,16319038,16319575,16320178,16321407,16322437,16322803,16323289,16324527,16324934,16325241,16325467,16326010,16327009,16327906,16328198,16328807,16329240,16329560,16331228,16331458,16331763,16331980,16333763,16333884,16336137,16340434,16344144,16344452,16347510,16348587,16348732,16350605 Gene ID= ENSG00000183889.12 TPM= 5.43 Transcript Type= NA chr16 17013732 17138731 17013732 17138731 + transcript1580.chr16.nnic@AC109446.3 transcript1580.chr16.nnic antisense_RNA 17013732,17025714,17134466,17138242 17014007,17025795,17134550,17138731 Gene ID= ENSG00000261448.1 TPM= 5.43 Transcript Type= NA chr16 17117111 17470922 17117111 17470922 - transcript1572.chr16.nnic@XYLT1 transcript1572.chr16.nnic protein_coding 17470434,17358012,17258988,17200482,17198212,17158829,17141153,17138355,17134473,17127666,17117646,17117111 17470922,17358050,17259498,17200654,17198414,17158909,17141369,17138531,17134735,17127861,17117979,17117488 Gene ID= ENSG00000103489.11 TPM= 2.72 Transcript Type= NA chr16 17117113 17470922 17117113 17470922 - transcript1573.chr16.nic@XYLT1 transcript1573.chr16.nic protein_coding 17470434,17358012,17258988,17200482,17198212,17158829,17141153,17138355,17134473,17127666,17117113 17470922,17358050,17259498,17200654,17198414,17158909,17141369,17138531,17134735,17127861,17117979 Gene ID= ENSG00000103489.11 TPM= 2.72 Transcript Type= NA chr16 17165889 17470922 17165889 17470922 - transcript1575.chr16.nnic@XYLT1 transcript1575.chr16.nnic protein_coding 17470434,17358012,17258988,17200482,17198212,17165889 17470922,17358050,17259498,17200654,17198414,17166132 Gene ID= ENSG00000103489.11 TPM= 1.81 Transcript Type= NA chr16 17228378 17470922 17228378 17470922 - transcript1582.chr16.nnic@XYLT1 transcript1582.chr16.nnic protein_coding 17470434,17358012,17258988,17228378 17470922,17358050,17259498,17228747 Gene ID= ENSG00000103489.11 TPM= 1.81 Transcript Type= NA chr16 17013732 17138731 17013732 17138731 - transcript1583.chr16.nnic@XYLT1 transcript1583.chr16.nnic protein_coding 17134466,17025714,17013732 17138731,17025795,17014007 Gene ID= ENSG00000103489.11 TPM= 2.72 Transcript Type= NA chr16 18317920 18402012 18317920 18402012 - transcript1587.chr16.nnic@AC126755.1 transcript1587.chr16.nnic transcribed_unprocessed_pseudogene 18401584,18352405,18352212,18351774,18350890,18350588,18349933,18349629,18349092,18348489,18347260,18346230,18345864,18345378,18344140,18343733,18343426,18343200,18342657,18341622,18340249,18339801,18339368,18339048,18337386,18337156,18336851,18336634,18334851,18328114,18324399,18324091,18321017,18319940,18319795,18317920 18402012,18352476,18352283,18351943,18351561,18350771,18350153,18349744,18349218,18348736,18348015,18346361,18346039,18345511,18344283,18344012,18343639,18343359,18342809,18341766,18340869,18339957,18339620,18339243,18337556,18337299,18337061,18336760,18334967,18328242,18324498,18324235,18321124,18320000,18319830,18318435 Gene ID= ENSG00000205746.9 TPM= 5.43 Transcript Type= NA chr16 18417325 18562211 18417325 18562211 - ENST00000330537.10@NOMO2 ENST00000330537.10 protein_coding 18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18434654,18433348,18431807,18430815,18429010,18426630,18424274,18418392,18417325 18562211,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18434767,18433475,18431948,18430898,18429120,18426731,18424393,18418484,18417968 Gene ID= ENSG00000185164.14 TPM= 1.81 Transcript Type= protein_coding chr16 18499925 18562170 18499925 18562170 - transcript1600.chr16.nic@NOMO2 transcript1600.chr16.nic protein_coding 18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18528013,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18499925 18562170,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18528071,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567 Gene ID= ENSG00000185164.14 TPM= 4.23 Transcript Type= NA chr16 18499925 18562112 18499925 18562112 - ENST00000622306.4@NOMO2 ENST00000622306.4 protein_coding 18561876,18557702,18554807,18551439,18549521,18547228,18543617,18542594,18542172,18538859,18538526,18533005,18531466,18531037,18529501,18527537,18524489,18523844,18520765,18520597,18519501,18519229,18517189,18515883,18514342,18513350,18511546,18509166,18506873,18500991,18499925 18562112,18557791,18554852,18551539,18549627,18547300,18543769,18542731,18542261,18538964,18538676,18533179,18531607,18531168,18529637,18527624,18524552,18523939,18520983,18520679,18519660,18519355,18517302,18516010,18514483,18513433,18511656,18509267,18506992,18501083,18500567 Gene ID= ENSG00000185164.14 TPM= 150.93 Transcript Type= protein_coding chr16 18781295 18790334 18781295 18790334 - ENST00000322989.8@RPS15A ENST00000322989.8 protein_coding 18790244,18788981,18788063,18784738,18781295 18790334,18789118,18788142,18784823,18783102 Gene ID= ENSG00000134419.15 TPM= 66.56 Transcript Type= protein_coding chr16 18782956 18790383 18782956 18790383 - ENST00000563390.5@RPS15A ENST00000563390.5 protein_coding 18790310,18788981,18788063,18784738,18782956 18790383,18789118,18788142,18784823,18783102 Gene ID= ENSG00000134419.15 TPM= 686.7 Transcript Type= protein_coding chr16 18782968 18790362 18782968 18790362 - ENST00000576008.5@RPS15A ENST00000576008.5 protein_coding 18790310,18788981,18788063,18786240,18784738,18782968 18790362,18789118,18788142,18786336,18784823,18783102 Gene ID= ENSG00000134419.15 TPM= 5.28 Transcript Type= nonsense_mediated_decay chr16 18782962 18790362 18782962 18790362 - ENST00000574723.5@RPS15A ENST00000574723.5 protein_coding 18790310,18788981,18784738,18782962 18790362,18789118,18784823,18783102 Gene ID= ENSG00000134419.15 TPM= 3.02 Transcript Type= nonsense_mediated_decay chr16 18791667 18801678 18791667 18801678 - ENST00000304414.11@ARL6IP1 ENST00000304414.11 protein_coding 18801431,18798701,18797925,18795464,18794599,18791667 18801678,18798834,18798044,18795581,18794683,18793370 Gene ID= ENSG00000170540.14 TPM= 953.54 Transcript Type= protein_coding chr16 19067599 19080095 19067599 19080095 + ENST00000321998.9@COQ7 ENST00000321998.9 protein_coding 19067599,19071928,19073921,19075721,19077306,19078081 19067737,19072106,19074035,19075860,19077374,19080095 Gene ID= ENSG00000167186.10 TPM= 8.15 Transcript Type= protein_coding chr16 19168249 19268334 19168249 19268334 + ENST00000355377.6@SYT17 ENST00000355377.6 protein_coding 19168249,19172760,19173430,19180391,19183528,19223045,19224683,19266880 19168661,19172777,19173578,19180539,19184147,19223165,19224838,19268334 Gene ID= ENSG00000103528.16 TPM= 1.81 Transcript Type= protein_coding chr16 19501689 19522145 19501689 19522145 - ENST00000353258.7@GDE1 ENST00000353258.7 protein_coding 19521704,19517014,19510839,19507687,19504881,19501689 19522145,19517189,19510944,19507779,19505092,19503617 Gene ID= ENSG00000006007.11 TPM= 107.15 Transcript Type= protein_coding chr16 19502383 19522123 19502383 19522123 - ENST00000564172.1@GDE1 ENST00000564172.1 protein_coding 19521704,19517014,19510839,19507687,19504881,19502383 19522123,19517185,19510944,19507779,19505092,19503617 Gene ID= ENSG00000006007.11 TPM= 7.09 Transcript Type= nonsense_mediated_decay chr16 19523857 19553408 19523857 19553408 + ENST00000381396.9@CCP110 ENST00000381396.9 protein_coding 19523857,19527867,19532416,19535940,19540657,19541887,19542621,19542878,19544797,19545094,19545817,19546412,19547955,19548515,19551196 19524088,19528022,19532544,19537587,19540787,19542064,19542760,19542994,19544898,19545210,19545890,19546474,19548014,19548600,19553408 Gene ID= ENSG00000103540.16 TPM= 1.81 Transcript Type= protein_coding chr16 19555415 19701163 19555415 19701163 + ENST00000251143.9@C16orf62 ENST00000251143.9 protein_coding 19555415,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19616114,19616686,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19650382,19651976,19669160,19682225,19691353,19699502,19700378 19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19616191,19616808,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19650459,19652090,19669299,19682390,19691471,19699648,19701163 Gene ID= ENSG00000103544.14 TPM= 118.63 Transcript Type= protein_coding chr16 19555720 19700684 19555720 19700684 + transcript1648.chr16.nic@C16orf62 transcript1648.chr16.nic protein_coding 19555720,19564851,19569424,19573119,19575098,19579052,19581525,19591790,19601664,19608178,19608974,19610322,19616114,19616686,19626177,19627694,19628637,19629767,19633092,19637594,19640015,19642396,19644886,19647784,19651976,19669160,19682225,19691353,19699502,19700378 19555746,19564950,19569591,19573241,19575122,19579128,19581653,19591874,19601723,19608274,19609021,19610415,19616191,19616808,19626223,19627805,19628753,19629820,19633172,19637656,19640100,19642476,19644949,19647882,19652090,19669299,19682390,19691471,19699648,19700684 Gene ID= ENSG00000103544.14 TPM= 4.53 Transcript Type= NA chr16 19716456 19858467 19716456 19858467 + ENST00000320394.10@IQCK ENST00000320394.10 protein_coding 19716456,19717695,19730430,19733698,19735353,19763848,19764035,19788838,19827026,19856487 19716542,19718487,19730494,19733827,19735450,19763900,19764112,19788922,19827137,19858467 Gene ID= ENSG00000174628.16 TPM= 8.15 Transcript Type= protein_coding chr16 19856691 19884917 19856691 19884917 - ENST00000300571.6@GPRC5B ENST00000300571.6 protein_coding 19884727,19871816,19861837,19856691 19884917,19872846,19861973,19860544 Gene ID= ENSG00000167191.11 TPM= 35.32 Transcript Type= protein_coding chr16 20409534 20441336 20409534 20441336 + ENST00000331849.8@ACSM5 ENST00000331849.8 protein_coding 20409534,20411470,20418059,20419228,20421258,20423916,20427788,20429678,20430993,20431220,20437052,20437268,20439800,20440344 20409665,20411688,20418269,20419435,20421401,20424069,20427867,20429801,20431073,20431321,20437179,20437367,20439919,20441336 Gene ID= ENSG00000183549.10 TPM= 5.43 Transcript Type= protein_coding chr16 20409541 20441335 20409541 20441335 + transcript1662.chr16.nic@ACSM5 transcript1662.chr16.nic protein_coding 20409541,20411470,20418059,20419228,20423916,20427788,20429678,20430993,20431220,20437052,20437268,20439800,20440344 20409665,20411688,20418269,20421401,20424069,20427867,20429801,20431073,20431321,20437179,20437367,20439919,20441335 Gene ID= ENSG00000183549.10 TPM= 3.62 Transcript Type= NA chr16 20674531 20682176 20674531 20682176 + ENST00000614721.1@ACSM3 ENST00000614721.1 protein_coding 20674531,20679158 20674822,20682176 Gene ID= ENSG00000005187.11 TPM= 2.72 Transcript Type= processed_transcript chr16 20733664 20742084 20733664 20742084 - ENST00000381337.6@THUMPD1 ENST00000381337.6 protein_coding 20741509,20738897,20737708,20736860,20733664 20742084,20739071,20737956,20737286,20736358 Gene ID= ENSG00000066654.13 TPM= 14.49 Transcript Type= protein_coding chr16 20735375 20741796 20735375 20741796 - ENST00000396083.6@THUMPD1 ENST00000396083.6 protein_coding 20741509,20738897,20737708,20735375 20741796,20739071,20737956,20737286 Gene ID= ENSG00000066654.13 TPM= 14.49 Transcript Type= protein_coding chr16 20763997 20797575 20763997 20797575 + transcript1675.chr16.nic@ACSM3 transcript1675.chr16.nic protein_coding 20763997,20769984,20775839,20777373,20779797,20780714,20780974,20781708,20784984,20786078,20790587,20792002,20792236,20796370,20796886 20764125,20770253,20776049,20777580,20779907,20780857,20781130,20781787,20785107,20786158,20790688,20792129,20792335,20796489,20797575 Gene ID= ENSG00000005187.11 TPM= 1.81 Transcript Type= NA chr16 20763702 20797581 20763702 20797581 + ENST00000289416.9@ACSM3 ENST00000289416.9 protein_coding 20763702,20769984,20775839,20777373,20780714,20780974,20781708,20784984,20786078,20790587,20792002,20792236,20796370,20796886 20764125,20770253,20776049,20777580,20780857,20781130,20781787,20785107,20786158,20790688,20792129,20792335,20796489,20797581 Gene ID= ENSG00000005187.11 TPM= 4.53 Transcript Type= protein_coding chr16 20796344 20806459 20796344 20806459 - transcript1683.chr16.nic@ERI2 transcript1683.chr16.nic protein_coding 20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344 20806459,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20798211 Gene ID= ENSG00000196678.13 TPM= 1.81 Transcript Type= NA chr16 20796344 20806459 20796344 20806459 - transcript1684.chr16.nic@ERI2 transcript1684.chr16.nic protein_coding 20805715,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344 20806459,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20799067 Gene ID= ENSG00000196678.13 TPM= 4.53 Transcript Type= NA chr16 20796344 20806473 20796344 20806473 - ENST00000357967.8@ERI2 ENST00000357967.8 protein_coding 20806408,20803603,20803433,20802796,20801203,20800302,20799957,20799263,20796344 20806473,20803670,20803516,20802923,20801359,20800402,20800038,20799351,20799067 Gene ID= ENSG00000196678.13 TPM= 1.81 Transcript Type= protein_coding chr16 20806499 20849668 20806499 20849668 + ENST00000261377.10@REXO5 ENST00000261377.10 protein_coding 20806499,20806952,20813190,20814927,20816116,20821762,20824439,20825833,20827058,20827353,20828435,20832156,20833003,20839755,20840331,20843934,20844629,20845054,20846221,20849399 20806705,20807091,20813302,20815053,20816212,20821902,20824527,20825948,20827196,20827447,20828537,20832259,20833123,20839859,20840468,20844026,20844845,20845241,20846339,20849668 Gene ID= ENSG00000005189.19 TPM= 2.72 Transcript Type= protein_coding chr16 20806613 20849667 20806613 20849667 + transcript1673.chr16.nic@REXO5 transcript1673.chr16.nic protein_coding 20806613,20813190,20814985,20816116,20821762,20825833,20827058,20827353,20828435,20832156,20833003,20839755,20840331,20843934,20844629,20845054,20846221,20849399 20806705,20813302,20815053,20816212,20821902,20825948,20827196,20827447,20828537,20832259,20833123,20839859,20840468,20844026,20844845,20845241,20846339,20849667 Gene ID= ENSG00000005189.19 TPM= 1.81 Transcript Type= NA chr16 20854925 20900384 20854925 20900384 - ENST00000324344.8@DCUN1D3 ENST00000324344.8 protein_coding 20900204,20862108,20854925 20900384,20862643,20860369 Gene ID= ENSG00000188215.9 TPM= 23.54 Transcript Type= protein_coding chr16 20900235 20925004 20900235 20925004 + ENST00000439021.5@LYRM1 ENST00000439021.5 protein_coding 20900235,20915556,20920122,20924000 20900535,20915714,20920214,20925004 Gene ID= ENSG00000102897.9 TPM= 4.53 Transcript Type= protein_coding chr16 20900770 20925008 20900770 20925008 + transcript1699.chr16.nnic@LYRM1 transcript1699.chr16.nnic protein_coding 20900770,20920122,20924000 20900889,20920214,20925008 Gene ID= ENSG00000102897.9 TPM= 5.43 Transcript Type= NA chr16 21158604 21180614 21158604 21180614 + transcript1701.chr16.nnic@TMEM159 transcript1701.chr16.nnic protein_coding 21158604,21161085,21170437,21174010,21177162,21179475 21158746,21161278,21170605,21174148,21177327,21180614 Gene ID= ENSG00000011638.10 TPM= 2.49 Transcript Type= NA chr16 21158629 21180616 21158629 21180616 + transcript1703.chr16.nic@TMEM159 transcript1703.chr16.nic protein_coding 21158629,21160978,21166840,21170437,21174010,21179475 21158746,21161278,21166911,21170605,21174148,21180616 Gene ID= ENSG00000011638.10 TPM= 2.49 Transcript Type= NA chr16 21158377 21180616 21158377 21180616 + ENST00000233047.8@TMEM159 ENST00000233047.8 protein_coding 21158377,21161085,21170437,21174010,21179475 21158746,21161278,21170605,21174148,21180616 Gene ID= ENSG00000011638.10 TPM= 28.75 Transcript Type= protein_coding chr16 21158679 21180609 21158679 21180609 + ENST00000261388.7@TMEM159 ENST00000261388.7 protein_coding 21158679,21160978,21170437,21174010,21179475 21158746,21161278,21170605,21174148,21180609 Gene ID= ENSG00000011638.10 TPM= 18.79 Transcript Type= protein_coding chr16 21463540 21502287 21463540 21502287 - transcript1712.chr16.nnic@SMG1P3 transcript1712.chr16.nnic transcribed_unprocessed_pseudogene 21501777,21487578,21484372,21479442,21478091,21476599,21473124,21472673,21471654,21469747,21467092,21464716,21463540 21502287,21487616,21484535,21479578,21478146,21476812,21473249,21472745,21471751,21469919,21467316,21464817,21463993 Gene ID= ENSG00000180747.15 TPM= 3.62 Transcript Type= NA chr16 21463540 21502234 21463540 21502234 - transcript1713.chr16.nic@SMG1P3 transcript1713.chr16.nic transcribed_unprocessed_pseudogene 21501777,21484372,21479442,21478091,21476599,21473124,21472673,21471654,21469747,21467092,21464716,21463540 21502234,21484535,21479578,21478146,21476812,21473249,21472745,21471751,21469919,21467316,21464817,21463993 Gene ID= ENSG00000180747.15 TPM= 1.81 Transcript Type= NA chr16 21599476 21657473 21599476 21657473 + ENST00000358154.7@METTL9 ENST00000358154.7 protein_coding 21599476,21612645,21617865,21624931,21655227 21599898,21612835,21618074,21625115,21657473 Gene ID= ENSG00000197006.13 TPM= 309.09 Transcript Type= protein_coding chr16 21599513 21657473 21599513 21657473 + transcript1732.chr16.nic@METTL9 transcript1732.chr16.nic protein_coding 21599513,21617865,21624931,21655227 21599898,21618074,21625115,21657473 Gene ID= ENSG00000197006.13 TPM= 16.3 Transcript Type= NA chr16 21639537 21652660 21639537 21652660 - ENST00000268389.5@IGSF6 ENST00000268389.5 protein_coding 21652532,21647133,21644290,21643548,21643074,21639537 21652660,21647492,21644396,21643598,21643154,21641593 Gene ID= ENSG00000140749.8 TPM= 3.62 Transcript Type= protein_coding chr16 21952660 21983660 21952660 21983660 + ENST00000268379.8@UQCRC2 ENST00000268379.8 protein_coding 21952660,21957235,21957417,21958535,21962460,21962761,21965408,21968628,21971525,21971923,21973896,21976167,21980547,21983088 21953456,21957318,21957566,21958599,21962516,21962885,21965505,21968685,21971620,21972122,21973976,21976243,21980700,21983660 Gene ID= ENSG00000140740.10 TPM= 278 Transcript Type= protein_coding chr16 22008095 22087512 22008095 22087512 + transcript1751.chr16.nnic@C16orf52 transcript1751.chr16.nnic protein_coding 22008095,22075487,22085644,22087057 22008407,22075699,22085750,22087512 Gene ID= ENSG00000185716.11 TPM= 1.81 Transcript Type= NA chr16 22297417 22335101 22297417 22335101 + transcript1763.chr16.nnic@POLR3E transcript1763.chr16.nnic protein_coding 22297417,22302956,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644 22297445,22303004,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335101 Gene ID= ENSG00000058600.15 TPM= 2.72 Transcript Type= NA chr16 22297375 22335101 22297375 22335101 + ENST00000615879.4@POLR3E ENST00000615879.4 protein_coding 22297375,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644 22297537,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335101 Gene ID= ENSG00000058600.15 TPM= 1.81 Transcript Type= protein_coding chr16 22297409 22335103 22297409 22335103 + ENST00000299853.9@POLR3E ENST00000299853.9 protein_coding 22297409,22302931,22305156,22308148,22308925,22309428,22313620,22314079,22315089,22316601,22316995,22317115,22318826,22322850,22324354,22324503,22325205,22325761,22328510,22332060,22333644 22297537,22303004,22305206,22308225,22309040,22309510,22313727,22314128,22315208,22316686,22317039,22317206,22318946,22322931,22324413,22324660,22325266,22326278,22328587,22332185,22335103 Gene ID= ENSG00000058600.15 TPM= 51.62 Transcript Type= protein_coding chr16 22345934 22437561 22345934 22437561 - transcript1770.chr16.nnic@CDR2 transcript1770.chr16.nnic protein_coding 22437005,22435682,22434627,22432726,22429796,22426213,22364902,22349701,22349279,22345934 22437561,22435812,22434811,22432834,22429948,22426366,22365014,22349849,22349443,22347823 Gene ID= ENSG00000140743.7 TPM= 6.34 Transcript Type= NA chr16 22345934 22437561 22345934 22437561 - transcript1772.chr16.nic@CDR2 transcript1772.chr16.nic protein_coding 22437005,22435682,22434627,22432726,22429796,22364902,22349701,22349279,22345934 22437561,22435812,22434811,22432834,22429948,22365014,22349849,22349443,22347823 Gene ID= ENSG00000140743.7 TPM= 5.43 Transcript Type= NA chr16 22345934 22437214 22345934 22437214 - transcript1773.chr16.nnic@CDR2 transcript1773.chr16.nnic protein_coding 22437005,22435682,22434627,22432726,22429796,22426213,22349701,22349279,22345934 22437214,22435812,22434811,22432834,22429948,22426366,22349849,22349443,22347823 Gene ID= ENSG00000140743.7 TPM= 1.81 Transcript Type= NA chr16 22421960 22437223 22421960 22437223 - transcript1780.chr16.nic@CDR2 transcript1780.chr16.nic protein_coding 22437005,22435682,22434627,22432726,22429796,22421960 22437223,22435812,22434811,22432834,22429948,22422214 Gene ID= ENSG00000140743.7 TPM= 1.81 Transcript Type= NA chr16 22345936 22374617 22345936 22374617 - ENST00000268383.6@CDR2 ENST00000268383.6 protein_coding 22374231,22364902,22349701,22349279,22345936 22374617,22365014,22349849,22349443,22347823 Gene ID= ENSG00000140743.7 TPM= 20.83 Transcript Type= protein_coding chr16 22348331 22374620 22348331 22374620 - transcript1784.chr16.nic@CDR2 transcript1784.chr16.nic protein_coding 22374231,22364902,22349701,22348331 22374620,22365014,22349849,22349443 Gene ID= ENSG00000140743.7 TPM= 2.72 Transcript Type= NA chr16 22814162 22916336 22814162 22916336 + transcript1786.chr16.nnic@HS3ST2 transcript1786.chr16.nnic protein_coding 22814162,22854664,22914944 22815095,22854781,22916336 Gene ID= ENSG00000122254.6 TPM= 3.62 Transcript Type= NA chr16 23078976 23149437 23078976 23149437 - transcript1790.chr16.nic@USP31 transcript1790.chr16.nic protein_coding 23148638,23108046,23106399,23106213,23105441,23102319,23090624,23087724,23087092,23085585,23084860,23082438,23078976 23149437,23108183,23106487,23106305,23105576,23102463,23090804,23087835,23087186,23085662,23084989,23082557,23080171 Gene ID= ENSG00000103404.14 TPM= 6.34 Transcript Type= NA chr16 23388493 23453180 23388493 23453180 - ENST00000307149.9@COG7 ENST00000307149.9 protein_coding 23452826,23445813,23445048,23442477,23434636,23433545,23424749,23418700,23416967,23413448,23410295,23406076,23403694,23398046,23393233,23392380,23388493 23453180,23445961,23445164,23442645,23434718,23433667,23424947,23418827,23417121,23413564,23410360,23406262,23403834,23398129,23393347,23392523,23389086 Gene ID= ENSG00000168434.12 TPM= 50.71 Transcript Type= protein_coding chr16 23452750 23455787 23452750 23455787 + transcript1799.chr16.nnic@AC008915.2 transcript1799.chr16.nnic lincRNA 23452750,23454743,23455470 23453269,23454797,23455787 Gene ID= ENSG00000260136.5 TPM= 2.72 Transcript Type= NA chr16 23464323 23510524 23464323 23510524 - transcript1810.chr16.nic@GGA2 transcript1810.chr16.nic protein_coding 23510321,23495694,23494303,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23464323 23510524,23495778,23494378,23493587,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700 Gene ID= ENSG00000103365.15 TPM= 4.53 Transcript Type= NA chr16 23464323 23510524 23464323 23510524 - transcript1812.chr16.nic@GGA2 transcript1812.chr16.nic protein_coding 23510321,23495694,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23464323 23510524,23495778,23494378,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700 Gene ID= ENSG00000103365.15 TPM= 12.68 Transcript Type= NA chr16 23463542 23510494 23463542 23510494 - ENST00000309859.8@GGA2 ENST00000309859.8 protein_coding 23510321,23495694,23494303,23493360,23491677,23488606,23486710,23486015,23482923,23480645,23479765,23478883,23478368,23474904,23469996,23468886,23463542 23510494,23495778,23494378,23493458,23491800,23488709,23486790,23486152,23483004,23480770,23479887,23478911,23478501,23475061,23470165,23468996,23467700 Gene ID= ENSG00000103365.15 TPM= 155.75 Transcript Type= protein_coding chr16 23522017 23557350 23522017 23557350 - ENST00000563459.5@EARS2 ENST00000563459.5 protein_coding 23557205,23552149,23544514,23534888,23532657,23529744,23529502,23525244,23523511,23522017 23557350,23552304,23544703,23535360,23532765,23529897,23529632,23525379,23524454,23523417 Gene ID= ENSG00000103356.15 TPM= 5.89 Transcript Type= protein_coding chr16 23522014 23557375 23522014 23557375 - ENST00000449606.5@EARS2 ENST00000449606.5 protein_coding 23557205,23552149,23544514,23534888,23532657,23529744,23529502,23525244,23522014 23557375,23552304,23544703,23535360,23532765,23529897,23529632,23525379,23524454 Gene ID= ENSG00000103356.15 TPM= 35.77 Transcript Type= protein_coding chr16 23557706 23574391 23557706 23574391 + transcript1822.chr16.nnic@UBFD1 transcript1822.chr16.nnic protein_coding 23557706,23557950,23559468,23562206,23562625,23564039,23566987,23570480 23557767,23558279,23559676,23562271,23562730,23564109,23567069,23574391 Gene ID= ENSG00000103353.15 TPM= 7.09 Transcript Type= NA chr16 23557362 23574389 23557362 23574389 + ENST00000395878.7@UBFD1 ENST00000395878.7 protein_coding 23557362,23557950,23559468,23562206,23562625,23566987,23570480 23557767,23558279,23559676,23562271,23562730,23567069,23574389 Gene ID= ENSG00000103353.15 TPM= 44.22 Transcript Type= protein_coding chr16 23557651 23574392 23557651 23574392 + transcript1826.chr16.nnic@UBFD1 transcript1826.chr16.nnic protein_coding 23557651,23557950,23559468,23562206,23562625,23570480 23557767,23558279,23559676,23562271,23562730,23574392 Gene ID= ENSG00000103353.15 TPM= 3.92 Transcript Type= NA chr16 23581002 23596356 23581002 23596356 - ENST00000007516.7@NDUFAB1 ENST00000007516.7 protein_coding 23596123,23587197,23585336,23582276,23581002 23596356,23587319,23585423,23582375,23581173 Gene ID= ENSG00000004779.9 TPM= 123.15 Transcript Type= protein_coding chr16 23603161 23641353 23603161 23641353 - transcript1833.chr16.nic@PALB2 transcript1833.chr16.nic protein_coding 23641110,23638070,23637850,23634862,23629640,23629204,23626236,23624009,23622969,23621362,23614004,23603161 23641353,23638129,23637952,23636334,23630469,23629275,23626397,23624094,23623130,23621478,23614091,23603669 Gene ID= ENSG00000083093.9 TPM= 5.43 Transcript Type= NA chr16 23641469 23669861 23641469 23669861 + transcript1835.chr16.nnic@DCTN5 transcript1835.chr16.nnic protein_coding 23641469,23642955,23658507,23661170,23665626,23667047,23669443 23641590,23643023,23658625,23661281,23665728,23667573,23669861 Gene ID= ENSG00000166847.9 TPM= 2.72 Transcript Type= NA chr16 23678822 23690367 23678822 23690367 + ENST00000300093.8@PLK1 ENST00000300093.8 protein_coding 23678822,23680084,23680914,23682064,23683870,23687469,23688668,23689238,23689494,23689860 23679340,23680252,23681058,23682157,23684089,23687624,23688745,23689392,23689676,23690367 Gene ID= ENSG00000166851.14 TPM= 3.62 Transcript Type= protein_coding chr16 23690360 23695893 23690360 23695893 - transcript1842.chr16.nnic@ERN2 transcript1842.chr16.nnic protein_coding 23695799,23695200,23695019,23694728,23692184,23691963,23691302,23691129,23690360 23695893,23695389,23695118,23694927,23692331,23692090,23691425,23691196,23691043 Gene ID= ENSG00000134398.14 TPM= 2.72 Transcript Type= NA chr16 24539529 24559809 24539529 24559809 + transcript1849.chr16.nic@RBBP6 transcript1849.chr16.nic protein_coding 24539529,24546163,24548945,24553513,24555615,24555821,24556308,24559505 24540792,24546262,24548981,24553557,24555703,24555917,24556447,24559809 Gene ID= ENSG00000122257.18 TPM= 19.92 Transcript Type= NA chr16 24919387 25015375 24919387 25015375 - transcript1856.chr16.nic@ARHGAP17 transcript1856.chr16.nic protein_coding 25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24939364,24935470,24930784,24927684,24919387 25015375,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24939597,24935639,24931404,24927732,24920260 Gene ID= ENSG00000140750.16 TPM= 1.81 Transcript Type= NA chr16 24919385 25015331 24919385 25015331 - ENST00000289968.10@ARHGAP17 ENST00000289968.10 protein_coding 25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24939364,24935470,24930784,24919385 25015331,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24939597,24935639,24931404,24920260 Gene ID= ENSG00000140750.16 TPM= 3.62 Transcript Type= protein_coding chr16 24919393 25015331 24919393 25015331 - ENST00000303665.9@ARHGAP17 ENST00000303665.9 protein_coding 25015209,24978966,24977215,24970507,24968661,24968351,24964197,24959911,24959671,24954603,24952931,24952289,24949404,24947482,24943771,24941987,24935470,24930784,24919393 25015331,24979005,24977319,24970580,24968772,24968427,24964308,24959979,24959752,24954730,24953042,24952370,24949484,24947595,24943862,24942143,24935639,24931404,24920260 Gene ID= ENSG00000140750.16 TPM= 1.81 Transcript Type= protein_coding chr16 25111722 25178231 25111722 25178231 + transcript1862.chr16.nnic@LCMT1 transcript1862.chr16.nnic protein_coding 25111722,25125964,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001 25111768,25126130,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231 Gene ID= ENSG00000205629.11 TPM= 1.81 Transcript Type= NA chr16 25111729 25178231 25111729 25178231 + ENST00000399069.7@LCMT1 ENST00000399069.7 protein_coding 25111729,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001 25111996,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231 Gene ID= ENSG00000205629.11 TPM= 43.47 Transcript Type= protein_coding chr16 25111730 25178231 25111730 25178231 + transcript1868.chr16.nic@LCMT1 transcript1868.chr16.nic protein_coding 25111730,25128475,25132402,25140171,25151554,25161102,25164598,25169112,25170714,25174937,25178001 25111768,25128566,25132523,25140247,25151615,25161204,25164718,25169213,25170805,25175034,25178231 Gene ID= ENSG00000205629.11 TPM= 3.62 Transcript Type= NA chr16 25111735 25178198 25111735 25178198 + ENST00000564011.5@LCMT1 ENST00000564011.5 protein_coding 25111735,25128475,25132402,25140171,25164598,25169112,25170714,25174937,25178001 25111996,25128570,25132523,25140247,25164718,25169213,25170805,25175034,25178198 Gene ID= ENSG00000205629.11 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr16 27203495 27221768 27203495 27221768 + ENST00000286096.8@KDM8 ENST00000286096.8 protein_coding 27203495,27210093,27213585,27214876,27215945,27218961,27220393,27220566 27203636,27210621,27213751,27215008,27215989,27219110,27220485,27221768 Gene ID= ENSG00000155666.11 TPM= 2.72 Transcript Type= protein_coding chr16 27224991 27268794 27224991 27268794 - ENST00000361439.8@NSMCE1 ENST00000361439.8 protein_coding 27268706,27257435,27235178,27234188,27233001,27226720,27225726,27224991 27268794,27257581,27235299,27234265,27233147,27226836,27225846,27225236 Gene ID= ENSG00000169189.16 TPM= 68.82 Transcript Type= protein_coding chr16 27313564 27364779 27313564 27364779 + transcript1892.chr16.nnic@IL4R transcript1892.chr16.nnic protein_coding 27313564,27330066,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252 27313817,27330198,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364779 Gene ID= ENSG00000077238.13 TPM= 7.52 Transcript Type= NA chr16 27313580 27364779 27313580 27364779 + transcript1904.chr16.nic@IL4R transcript1904.chr16.nic protein_coding 27313580,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252 27313817,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364779 Gene ID= ENSG00000077238.13 TPM= 8.42 Transcript Type= NA chr16 27313913 27364778 27313913 27364778 + ENST00000395762.6@IL4R ENST00000395762.6 protein_coding 27313913,27330066,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252 27314020,27330198,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778 Gene ID= ENSG00000077238.13 TPM= 48.27 Transcript Type= protein_coding chr16 27313926 27364778 27313926 27364778 + ENST00000543915.6@IL4R ENST00000543915.6 protein_coding 27313926,27340186,27342121,27344869,27346467,27352540,27355808,27358916,27360766,27362252 27314020,27340273,27342259,27345020,27346618,27352696,27355907,27358994,27360815,27364778 Gene ID= ENSG00000077238.13 TPM= 20.19 Transcript Type= protein_coding chr16 27402162 27452042 27402162 27452042 + ENST00000337929.7@IL21R ENST00000337929.7 protein_coding 27402162,27430056,27434347,27437488,27442962,27444542,27445177,27446007,27448534 27402618,27430120,27434449,27437687,27443116,27444719,27445276,27446088,27452042 Gene ID= ENSG00000103522.15 TPM= 1.81 Transcript Type= protein_coding chr16 27460613 27549913 27460613 27549913 - ENST00000561623.5@GTF3C1 ENST00000561623.5 protein_coding 27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464395,27463541,27462294,27460613 27549913,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562 Gene ID= ENSG00000077235.17 TPM= 11.77 Transcript Type= protein_coding chr16 27460678 27549906 27460678 27549906 - ENST00000356183.8@GTF3C1 ENST00000356183.8 protein_coding 27549670,27545314,27538180,27537784,27533291,27528598,27511749,27508540,27506847,27505899,27502859,27501191,27498630,27497637,27495211,27494763,27493199,27492617,27492338,27489602,27489043,27488554,27488227,27485997,27484211,27483044,27481079,27478469,27476451,27471748,27470108,27469291,27465260,27464320,27463541,27462294,27460678 27549906,27545523,27538356,27537927,27533387,27528721,27511901,27508655,27507156,27506116,27502995,27501344,27498733,27497821,27495492,27494908,27493296,27492713,27492515,27489743,27489178,27488635,27488415,27486154,27484353,27483125,27481191,27478531,27476544,27471920,27470395,27469550,27465540,27464836,27463592,27462486,27461562 Gene ID= ENSG00000077235.17 TPM= 15.39 Transcript Type= protein_coding chr16 28097979 28211920 28097979 28211920 - transcript1933.chr16.nic@XPO6 transcript1933.chr16.nic protein_coding 28211366,28177220,28175898,28169750,28166508,28156074,28152659,28146094,28135216,28133841,28132334,28125689,28121670,28117318,28112904,28111817,28107522,28106383,28106043,28104546,28101847,28101458,28097979 28211920,28177332,28176095,28169909,28166585,28156527,28152785,28146203,28135324,28133933,28132403,28125848,28121762,28117462,28113050,28112006,28107677,28106497,28106214,28104707,28101945,28101688,28098639 Gene ID= ENSG00000169180.11 TPM= 10.87 Transcript Type= NA chr16 28292519 28323849 28292519 28323849 + ENST00000341901.4@SBK1 ENST00000341901.4 protein_coding 28292519,28317385,28318995,28320076 28293300,28317617,28319197,28323849 Gene ID= ENSG00000188322.4 TPM= 15.39 Transcript Type= protein_coding chr16 28379581 28403879 28379581 28403879 - ENST00000380876.4@EIF3CL ENST00000380876.4 protein_coding 28403787,28403518,28401539,28401207,28400859,28400615,28400377,28399871,28391980,28391752,28390840,28390520,28390291,28388508,28388058,28383118,28380632,28380468,28380292,28379976,28379581 28403879,28403648,28401604,28401396,28400984,28400669,28400486,28399998,28392142,28391855,28390981,28390645,28390384,28388698,28388282,28383481,28380791,28380533,28380379,28380138,28379880 Gene ID= ENSG00000205609.12 TPM= 50.71 Transcript Type= protein_coding chr16 28477273 28492283 28477273 28492283 - transcript1942.chr16.nic@CLN3 transcript1942.chr16.nic protein_coding 28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477464,28477273 28492283,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635,28477359 Gene ID= ENSG00000188603.18 TPM= 3.62 Transcript Type= NA chr16 28475351 28492293 28475351 28492293 - ENST00000636147.1@CLN3 ENST00000636147.1 protein_coding 28492020,28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28475351 28492293,28491835,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635 Gene ID= ENSG00000188603.18 TPM= 76.29 Transcript Type= protein_coding chr16 28477272 28492074 28477272 28492074 - ENST00000359984.12@CLN3 ENST00000359984.12 protein_coding 28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477272 28492074,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635 Gene ID= ENSG00000188603.18 TPM= 34.86 Transcript Type= protein_coding chr16 28477280 28492005 28477280 28492005 - ENST00000357857.14@CLN3 ENST00000357857.14 protein_coding 28491714,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482327,28482105,28477737,28477280 28492005,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28482198,28477877,28477635 Gene ID= ENSG00000188603.18 TPM= 1.36 Transcript Type= protein_coding chr16 28477289 28492044 28477289 28492044 - ENST00000561689.6@CLN3 ENST00000561689.6 protein_coding 28491714,28491482,28489290,28488591,28487662,28487456,28486578,28486347,28484006,28482626,28482477,28482105,28477737,28477289 28492044,28491560,28489386,28488662,28487741,28487541,28486650,28486490,28484118,28482672,28482545,28482382,28477877,28477635 Gene ID= ENSG00000188603.18 TPM= 1.13 Transcript Type= retained_intron chr16 28532708 28539174 28532708 28539174 - ENST00000324873.7@NUPR1 ENST00000324873.7 protein_coding 28538796,28538006,28532708 28539174,28538155,28537669 Gene ID= ENSG00000176046.8 TPM= 495.33 Transcript Type= protein_coding chr16 28553918 28591791 28553918 28591791 + transcript1969.chr16.nic@SGF29 transcript1969.chr16.nic protein_coding 28553918,28581055,28584913,28585648,28588610,28589100,28590096,28590296,28590631,28590773,28591590 28554097,28581144,28584988,28585720,28588691,28589164,28590225,28590442,28590666,28590935,28591791 Gene ID= ENSG00000176476.8 TPM= 2.26 Transcript Type= NA chr16 28553926 28591790 28553926 28591790 + ENST00000317058.7@SGF29 ENST00000317058.7 protein_coding 28553926,28581055,28584913,28585648,28589100,28590096,28590296,28590631,28590773,28591590 28554097,28581144,28584988,28585720,28589164,28590225,28590442,28590666,28590935,28591790 Gene ID= ENSG00000176476.8 TPM= 15.85 Transcript Type= protein_coding chr16 28604991 28623645 28604991 28623645 - transcript1984.chr16.nnic@SULT1A1 transcript1984.chr16.nnic protein_coding 28623131,28620063,28610130,28609931,28608708,28608478,28608291,28606951,28606761,28606056,28604991 28623645,28620133,28610191,28609989,28608859,28608603,28608388,28607077,28606855,28606236,28605933 Gene ID= ENSG00000196502.11 TPM= 36.45 Transcript Type= NA chr16 28605628 28610007 28605628 28610007 - ENST00000314752.11@SULT1A1 ENST00000314752.11 protein_coding 28609931,28608708,28608478,28608291,28606951,28606761,28606056,28605628 28610007,28608859,28608603,28608388,28607077,28606855,28606236,28605933 Gene ID= ENSG00000196502.11 TPM= 164.58 Transcript Type= protein_coding chr16 28605628 28623625 28605628 28623625 - ENST00000563493.1@SULT1A1 ENST00000563493.1 protein_coding 28623131,28620063,28608708,28608478,28608291,28606951,28606761,28606056,28605628 28623625,28620133,28608859,28608603,28608388,28607077,28606855,28606236,28605933 Gene ID= ENSG00000196502.11 TPM= 7.92 Transcript Type= nonsense_mediated_decay chr16 28688558 28735598 28688558 28735598 + ENST00000566501.5@EIF3C ENST00000566501.5 protein_coding 28688558,28711657,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431 28688828,28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735598 Gene ID= ENSG00000184110.14 TPM= 10.87 Transcript Type= protein_coding chr16 28711527 28735597 28711527 28735597 + ENST00000566866.5@EIF3C ENST00000566866.5 protein_coding 28711527,28713701,28713909,28714321,28714636,28714819,28715307,28723164,28723448,28724322,28724658,28724919,28726605,28727021,28731829,28734520,28734778,28734932,28735173,28735431 28711787,28713766,28714098,28714446,28714690,28714928,28715434,28723323,28723551,28724463,28724783,28725012,28726795,28727245,28732192,28734679,28734843,28735019,28735335,28735597 Gene ID= ENSG00000184110.14 TPM= 10.87 Transcript Type= protein_coding chr16 28823093 28837237 28823093 28837237 + ENST00000382686.8@ATXN2L ENST00000382686.8 protein_coding 28823093,28825366,28825624,28825770,28826240,28826862,28829401,28829858,28830615,28830962,28832205,28832496,28832817,28833059,28833439,28834065,28834343,28834506,28835058,28835278,28835549,28835933,28836751 28823558,28825402,28825680,28825841,28826390,28826986,28829492,28830058,28830790,28831072,28832399,28832567,28832887,28833354,28833508,28834211,28834415,28834693,28835187,28835399,28835758,28836122,28837237 Gene ID= ENSG00000168488.18 TPM= 2.11 Transcript Type= protein_coding chr16 28823093 28837232 28823093 28837232 + ENST00000325215.10@ATXN2L ENST00000325215.10 protein_coding 28823093,28825366,28825624,28825770,28826240,28826862,28829401,28829858,28830615,28830962,28832205,28832496,28832817,28833059,28833439,28834065,28834343,28834506,28835058,28835278,28835549,28835933,28836751 28823558,28825402,28825680,28825841,28826390,28826986,28829492,28830058,28830790,28831072,28832399,28832567,28832887,28833354,28833508,28834211,28834415,28834693,28835187,28835399,28835758,28836176,28837232 Gene ID= ENSG00000168488.18 TPM= 3.02 Transcript Type= protein_coding chr16 28823093 28837237 28823093 28837237 + ENST00000336783.8@ATXN2L ENST00000336783.8 protein_coding 28823093,28825366,28825624,28825770,28826240,28826862,28829401,28829858,28830615,28830962,28832205,28832496,28832817,28833059,28833439,28834065,28834343,28834506,28835058,28835278,28835549,28835933 28823558,28825402,28825680,28825841,28826390,28826986,28829492,28830058,28830790,28831072,28832399,28832567,28832887,28833354,28833508,28834211,28834415,28834693,28835187,28835399,28835758,28837237 Gene ID= ENSG00000168488.18 TPM= 19.32 Transcript Type= protein_coding chr16 28842411 28846408 28842411 28846408 - ENST00000313511.7@TUFM ENST00000313511.7 protein_coding 28846218,28845912,28845314,28844951,28844698,28844419,28844230,28843950,28843736,28842411 28846408,28846106,28845480,28845055,28844862,28844551,28844334,28844101,28843855,28843148 Gene ID= ENSG00000178952.10 TPM= 626.64 Transcript Type= protein_coding chr16 28846604 28874214 28846604 28874214 + transcript2024.chr16.nic@SH2B1 transcript2024.chr16.nic protein_coding 28846604,28861618,28863668,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447 28846827,28861747,28863754,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874214 Gene ID= ENSG00000178188.14 TPM= 9.15 Transcript Type= NA chr16 28846577 28874214 28846577 28874214 + transcript2026.chr16.nic@SH2B1 transcript2026.chr16.nic protein_coding 28846577,28863668,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447 28846827,28863754,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874214 Gene ID= ENSG00000178188.14 TPM= 11.86 Transcript Type= NA chr16 28863442 28874214 28863442 28874214 + transcript2041.chr16.nic@SH2B1 transcript2041.chr16.nic protein_coding 28863442,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447 28863754,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874214 Gene ID= ENSG00000178188.14 TPM= 10.05 Transcript Type= NA chr16 28863805 28874214 28863805 28874214 + transcript2044.chr16.nic@SH2B1 transcript2044.chr16.nic protein_coding 28863805,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873170,28873447 28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28873269,28874214 Gene ID= ENSG00000178188.14 TPM= 24.54 Transcript Type= NA chr16 28863757 28874212 28863757 28874212 + ENST00000618521.4@SH2B1 ENST00000618521.4 protein_coding 28863757,28866012,28867331,28869006,28869208,28871780,28872190,28872534,28873447 28863945,28867033,28867432,28869097,28869383,28871983,28872401,28872705,28874212 Gene ID= ENSG00000178188.14 TPM= 2.35 Transcript Type= protein_coding chr16 28904421 28925752 28904421 28925752 - ENST00000358201.8@RABEP2 ENST00000358201.8 protein_coding 28925103,28924403,28919786,28914672,28914236,28911084,28910888,28908609,28906019,28905867,28905704,28905397,28904421 28925752,28924615,28919943,28914782,28914586,28911179,28910986,28908764,28906196,28905878,28905759,28905513,28905044 Gene ID= ENSG00000177548.12 TPM= 96.59 Transcript Type= protein_coding chr16 28950937 28967097 28950937 28967097 + ENST00000320805.8@NFATC2IP ENST00000320805.8 protein_coding 28950937,28952132,28954565,28955978,28956151,28958717,28958991,28963705 28951398,28952204,28954682,28956058,28956337,28958861,28959100,28967097 Gene ID= ENSG00000176953.12 TPM= 13.58 Transcript Type= protein_coding chr16 28974775 28984543 28974775 28984543 + ENST00000311008.15@SPNS1 ENST00000311008.15 protein_coding 28974775,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205 28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543 Gene ID= ENSG00000169682.17 TPM= 115.26 Transcript Type= protein_coding chr16 28974772 28984548 28974772 28984548 + ENST00000565975.5@SPNS1 ENST00000565975.5 protein_coding 28974772,28975101,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205 28974863,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984548 Gene ID= ENSG00000169682.17 TPM= 16.55 Transcript Type= protein_coding chr16 28974801 28984544 28974801 28984544 + ENST00000334536.12@SPNS1 ENST00000334536.12 protein_coding 28974801,28975492,28977908,28979155,28979405,28981470,28982356,28982857,28983192,28983786,28984205 28975392,28975557,28978044,28979306,28979471,28981615,28982545,28982922,28983290,28983957,28984544 Gene ID= ENSG00000169682.17 TPM= 6.29 Transcript Type= protein_coding chr16 28974794 28984543 28974794 28984543 + ENST00000323081.12@SPNS1 ENST00000323081.12 protein_coding 28974794,28975188,28975492,28977908,28979155,28979405,28981470,28981901,28982356,28982857,28983192,28983786,28984205 28975100,28975392,28975557,28978044,28979306,28979471,28981615,28982056,28982545,28982922,28983290,28983957,28984543 Gene ID= ENSG00000169682.17 TPM= 20.18 Transcript Type= protein_coding chr16 29075023 29116715 29075023 29116715 + transcript2088.chr16.nic@RRN3P2 transcript2088.chr16.nic processed_transcript 29075023,29076656,29077901,29084443,29084639,29085217,29086214,29087334,29090740,29094238,29096131,29097132,29099105,29101987,29104075,29113050,29116127 29075121,29076761,29077957,29084532,29084768,29085276,29086275,29087403,29090838,29094330,29096261,29097316,29099213,29102139,29104162,29113141,29116715 Gene ID= ENSG00000103472.10 TPM= 1.81 Transcript Type= NA chr16 29453593 29454964 29453593 29454964 - ENST00000330978.3@BOLA2 ENST00000330978.3 protein_coding 29454191,29454016,29453593 29454964,29454113,29453732 Gene ID= ENSG00000183336.8 TPM= 19.92 Transcript Type= protein_coding chr16 29443230 29454347 29443230 29454347 - ENST00000569622.5@BOLA2-SMG1P6 ENST00000569622.5 protein_coding 29454191,29454016,29446802,29444398,29443230 29454347,29454113,29446922,29444499,29443688 Gene ID= ENSG00000261740.6 TPM= 5.43 Transcript Type= protein_coding chr16 29454501 29458219 29454501 29458219 + ENST00000330181.9@SLX1B ENST00000330181.9 protein_coding 29454501,29455398,29455544,29457632,29457928,29458095 29454930,29455449,29455885,29457759,29458015,29458219 Gene ID= ENSG00000181625.17 TPM= 30.79 Transcript Type= protein_coding chr16 29459889 29464976 29459889 29464976 + ENST00000360423.11@SULT1A4 ENST00000360423.11 protein_coding 29459889,29461382,29461638,29461853,29463345,29463567,29464160,29464463 29459985,29461533,29461763,29461950,29463471,29463661,29464340,29464976 Gene ID= ENSG00000213648.10 TPM= 2.72 Transcript Type= protein_coding chr16 29545013 29595372 29545013 29595372 - transcript2093.chr16.nnic@SMG1P2 transcript2093.chr16.nnic unprocessed_pseudogene 29594887,29569271,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545013 29595372,29569328,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450 Gene ID= ENSG00000205534.6 TPM= 1.81 Transcript Type= NA chr16 29545013 29613769 29545013 29613769 - transcript2095.chr16.nnic@SMG1P2 transcript2095.chr16.nnic unprocessed_pseudogene 29613103,29566086,29565351,29561515,29560157,29558665,29554867,29554416,29553086,29551189,29548538,29546166,29545013 29613769,29566249,29565506,29561651,29560215,29558878,29554992,29554488,29553183,29551361,29548762,29546267,29545450 Gene ID= ENSG00000205534.6 TPM= 2.72 Transcript Type= NA chr16 29790731 29805387 29790731 29805387 + transcript2111.chr16.nic@KIF22 transcript2111.chr16.nic protein_coding 29790731,29792466,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29804814,29805115,29805263 29790829,29792514,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29804065,29805026,29805174,29805387 Gene ID= ENSG00000079616.12 TPM= 5.51 Transcript Type= NA chr16 29790747 29805387 29790747 29805387 + transcript2113.chr16.nnic@KIF22 transcript2113.chr16.nnic protein_coding 29790747,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803399,29803998,29804814,29805115,29805263 29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29804065,29805026,29805174,29805387 Gene ID= ENSG00000079616.12 TPM= 5.51 Transcript Type= NA chr16 29790749 29805387 29790749 29805387 + transcript2116.chr16.nic@KIF22 transcript2116.chr16.nic protein_coding 29790749,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29805115,29805263 29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29805026,29805174,29805387 Gene ID= ENSG00000079616.12 TPM= 20.6 Transcript Type= NA chr16 29790720 29805385 29790720 29805385 + ENST00000160827.8@KIF22 ENST00000160827.8 protein_coding 29790720,29796893,29798374,29798593,29798975,29799264,29799628,29799913,29802769,29803449,29803998,29804814,29805115,29805263 29790829,29797088,29798501,29798747,29799184,29799494,29799781,29800048,29802937,29803608,29804065,29805026,29805174,29805385 Gene ID= ENSG00000079616.12 TPM= 28.14 Transcript Type= protein_coding chr16 29806106 29811160 29806106 29811160 + ENST00000545521.5@MAZ ENST00000545521.5 protein_coding 29806106,29806807,29806978,29808230,29808570,29810077 29806180,29806893,29807828,29808293,29808741,29811160 Gene ID= ENSG00000103495.13 TPM= 7.13 Transcript Type= protein_coding chr16 29806596 29811164 29806596 29811164 + ENST00000219782.10@MAZ ENST00000219782.10 protein_coding 29806596,29806978,29808230,29808570,29809540,29810077 29806893,29807828,29808293,29808741,29809764,29811164 Gene ID= ENSG00000103495.13 TPM= 28.25 Transcript Type= protein_coding chr16 29806537 29811164 29806537 29811164 + ENST00000322945.10@MAZ ENST00000322945.10 protein_coding 29806537,29806978,29808230,29808570,29810077 29806893,29807828,29808293,29808741,29811164 Gene ID= ENSG00000103495.13 TPM= 71.42 Transcript Type= protein_coding chr16 29807775 29811163 29807775 29811163 + ENST00000568411.5@MAZ ENST00000568411.5 protein_coding 29807775,29808230,29808570,29810077,29811006 29807828,29808293,29808741,29810227,29811163 Gene ID= ENSG00000103495.13 TPM= 1.81 Transcript Type= protein_coding chr16 29808051 29811125 29808051 29811125 + ENST00000568544.5@MAZ ENST00000568544.5 protein_coding 29808051,29808570,29810077 29808293,29808741,29811125 Gene ID= ENSG00000103495.13 TPM= 26.26 Transcript Type= protein_coding chr16 29808146 29811128 29808146 29811128 + ENST00000568282.1@MAZ ENST00000568282.1 protein_coding 29808146,29808570,29809540,29810088 29808293,29808741,29809771,29811128 Gene ID= ENSG00000103495.13 TPM= 2.72 Transcript Type= protein_coding chr16 29808645 29821235 29808645 29821235 - transcript2160.chr16.nnic@AC009133.1 transcript2160.chr16.nnic antisense_RNA 29820878,29820184,29819540,29810035,29808645 29821235,29820337,29819601,29810173,29809133 Gene ID= ENSG00000238045.9 TPM= 7.24 Transcript Type= NA chr16 29808645 29821279 29808645 29821279 - transcript2164.chr16.nic@AC009133.1 transcript2164.chr16.nic antisense_RNA 29820878,29819540,29810035,29808645 29821279,29819601,29810173,29809133 Gene ID= ENSG00000238045.9 TPM= 6.34 Transcript Type= NA chr16 29808645 29821279 29808645 29821279 - transcript2165.chr16.nnic@AC009133.1 transcript2165.chr16.nnic antisense_RNA 29820878,29819540,29810035,29808645 29821279,29819601,29810224,29809133 Gene ID= ENSG00000238045.9 TPM= 6.34 Transcript Type= NA chr16 29817491 29821235 29817491 29821235 - transcript2171.chr16.nnic@AC009133.1 transcript2171.chr16.nnic antisense_RNA 29820878,29820184,29817491 29821235,29820337,29819601 Gene ID= ENSG00000238045.9 TPM= 1.81 Transcript Type= NA chr16 29820394 29848039 29820394 29848039 + ENST00000395353.5@MVP ENST00000395353.5 protein_coding 29820394,29830474,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762 29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039 Gene ID= ENSG00000013364.18 TPM= 217.87 Transcript Type= protein_coding chr16 29820408 29848039 29820408 29848039 + ENST00000357402.9@MVP ENST00000357402.9 protein_coding 29820408,29830515,29830878,29833733,29833935,29835704,29836722,29840178,29841596,29841915,29844493,29845863,29846158,29847197,29847762 29820510,29830674,29831073,29833856,29834066,29835798,29836958,29840459,29841840,29842112,29844879,29845979,29846284,29847385,29848039 Gene ID= ENSG00000013364.18 TPM= 658.87 Transcript Type= protein_coding chr16 29858357 29863736 29858357 29863736 - ENST00000219789.10@CDIPT ENST00000219789.10 protein_coding 29862815,29862586,29861106,29860581,29859442,29858357 29863736,29862720,29861259,29860662,29859523,29859334 Gene ID= ENSG00000103502.13 TPM= 287.51 Transcript Type= protein_coding chr16 29858372 29863204 29858372 29863204 - ENST00000566113.5@CDIPT ENST00000566113.5 protein_coding 29862815,29861106,29860581,29859442,29858372 29863204,29861259,29860662,29859523,29859334 Gene ID= ENSG00000103502.13 TPM= 6.79 Transcript Type= protein_coding chr16 29871161 29899572 29871161 29899572 - transcript2191.chr16.nic@SEZ6L2 transcript2191.chr16.nic protein_coding 29898941,29897853,29896822,29895721,29895259,29888540,29887649,29885586,29878287,29877271,29876756,29873538,29873240,29872409,29872187,29871161 29899572,29897984,29897121,29895860,29895460,29888725,29887817,29885749,29878425,29877467,29876950,29873729,29873431,29872526,29872283,29871728 Gene ID= ENSG00000174938.14 TPM= 3.02 Transcript Type= NA chr16 29871159 29899547 29871159 29899547 - ENST00000308713.9@SEZ6L2 ENST00000308713.9 protein_coding 29898941,29897853,29896822,29895721,29895259,29888540,29887649,29885586,29879864,29878287,29877271,29876756,29873538,29873240,29872409,29872187,29871159 29899547,29897984,29897121,29895860,29895460,29888725,29887817,29885749,29880064,29878425,29877467,29876950,29873729,29873431,29872526,29872283,29871728 Gene ID= ENSG00000174938.14 TPM= 21.13 Transcript Type= protein_coding chr16 29871161 29899264 29871161 29899264 - ENST00000617533.4@SEZ6L2 ENST00000617533.4 protein_coding 29898941,29897853,29896822,29895721,29895259,29888540,29887649,29885586,29879864,29878287,29877271,29876756,29873538,29873240,29872705,29872409,29872187,29871161 29899264,29897984,29897121,29895860,29895460,29888725,29887817,29885749,29880064,29878425,29877467,29876950,29873729,29873431,29872743,29872526,29872283,29871728 Gene ID= ENSG00000174938.14 TPM= 31.09 Transcript Type= protein_coding chr16 29900379 29906056 29900379 29906056 + ENST00000483405.5@ASPHD1 ENST00000483405.5 protein_coding 29900379,29901552,29904852,29905788 29900741,29901920,29904965,29906056 Gene ID= ENSG00000174939.10 TPM= 1.81 Transcript Type= protein_coding chr16 29906336 29927035 29906336 29927035 - ENST00000568000.5@KCTD13 ENST00000568000.5 protein_coding 29925790,29923190,29911960,29911815,29910978,29906336 29927035,29923359,29912049,29911867,29911173,29907108 Gene ID= ENSG00000174943.9 TPM= 19.92 Transcript Type= protein_coding chr16 29919636 29926228 29919636 29926228 - transcript2205.chr16.nnic@KCTD13 transcript2205.chr16.nnic protein_coding 29925790,29923190,29919636 29926228,29923359,29921961 Gene ID= ENSG00000174943.9 TPM= 1.81 Transcript Type= NA chr16 29962007 29973051 29962007 29973051 + transcript2222.chr16.nic@TMEM219 transcript2222.chr16.nic protein_coding 29962007,29963110,29963400,29968025,29971408,29972950 29962132,29963308,29963589,29968254,29971578,29973051 Gene ID= ENSG00000149932.16 TPM= 83.61 Transcript Type= NA chr16 29962030 29973052 29962030 29973052 + ENST00000279396.10@TMEM219 ENST00000279396.10 protein_coding 29962030,29963107,29963400,29968025,29971408,29972950 29962132,29963308,29963589,29968254,29971578,29973052 Gene ID= ENSG00000149932.16 TPM= 77.27 Transcript Type= protein_coding chr16 29962123 29973051 29962123 29973051 + transcript2228.chr16.nnic@TMEM219 transcript2228.chr16.nnic protein_coding 29962123,29963110,29963400,29968025,29971408,29972950 29962232,29963308,29963589,29968254,29971578,29973051 Gene ID= ENSG00000149932.16 TPM= 22.03 Transcript Type= NA chr16 29962677 29973018 29962677 29973018 + ENST00000566848.5@TMEM219 ENST00000566848.5 protein_coding 29962677,29963400,29968025,29971408,29972950 29963308,29963589,29968254,29971578,29973018 Gene ID= ENSG00000149932.16 TPM= 4.53 Transcript Type= protein_coding chr16 29962020 29988408 29962020 29988408 + transcript2209.chr16.nnic@TAOK2 transcript2209.chr16.nnic protein_coding 29962020,29963107,29963400,29968025,29971408,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265 29962132,29963308,29963589,29968254,29971578,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29988408 Gene ID= ENSG00000149930.17 TPM= 26.26 Transcript Type= NA chr16 29973836 29988398 29973836 29988398 + transcript2215.chr16.nnic@TAOK2 transcript2215.chr16.nnic protein_coding 29973836,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265,29988359 29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29986504,29988398 Gene ID= ENSG00000149930.17 TPM= 5.43 Transcript Type= NA chr16 29974281 29992261 29974281 29992261 + ENST00000279394.7@TAOK2 ENST00000279394.7 protein_coding 29974281,29977738,29978089,29978252,29978799,29978974,29979195,29979417,29981661,29981859,29982734,29983072,29983503,29985213,29985658,29986265,29989593,29990784,29991047 29974648,29977904,29978160,29978353,29978844,29979070,29979308,29979508,29981754,29981940,29982901,29983332,29983664,29985578,29985861,29986504,29989805,29990966,29992261 Gene ID= ENSG00000149930.17 TPM= 10.87 Transcript Type= protein_coding chr16 29992321 29996436 29992321 29996436 - ENST00000279392.7@HIRIP3 ENST00000279392.7 protein_coding 29995541,29995343,29995103,29993906,29993640,29993459,29992321 29996436,29995463,29995217,29994843,29993808,29993557,29993370 Gene ID= ENSG00000149929.15 TPM= 30.34 Transcript Type= protein_coding chr16 29992990 29995643 29992990 29995643 - ENST00000564026.1@HIRIP3 ENST00000564026.1 protein_coding 29995541,29995343,29995103,29993640,29993459,29992990 29995643,29995463,29995217,29993808,29993557,29993370 Gene ID= ENSG00000149929.15 TPM= 2.26 Transcript Type= protein_coding chr16 29996229 30005791 29996229 30005791 + transcript2243.chr16.nic@INO80E transcript2243.chr16.nic protein_coding 29996229,29996547,29996808,30000758,30000929,30001414,30004568,30005221 29996391,29996617,29996860,30000836,30001040,30001530,30004657,30005791 Gene ID= ENSG00000169592.14 TPM= 3.62 Transcript Type= NA chr16 29995294 30005793 29995294 30005793 + ENST00000563197.5@INO80E ENST00000563197.5 protein_coding 29995294,29996547,29996808,30000758,30000929,30001414,30005221 29996391,29996617,29996860,30000836,30001040,30001530,30005793 Gene ID= ENSG00000169592.14 TPM= 9.96 Transcript Type= protein_coding chr16 30005747 30012680 30005747 30012680 - transcript2239.chr16.nnic@DOC2A transcript2239.chr16.nnic protein_coding 30010902,30009961,30009478,30009202,30008996,30007171,30007031,30006778,30006596,30006413,30005747 30012680,30010235,30009557,30009276,30009105,30007302,30007090,30006950,30006673,30006509,30006331 Gene ID= ENSG00000149927.17 TPM= 1.81 Transcript Type= NA chr16 30053090 30070414 30053090 30070414 + ENST00000338110.9@ALDOA ENST00000338110.9 protein_coding 30053090,30053464,30054784,30055172,30063729,30064424,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117 30053217,30053499,30054927,30055327,30064248,30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414 Gene ID= ENSG00000149925.17 TPM= 116.82 Transcript Type= protein_coding chr16 30064274 30070414 30064274 30070414 + ENST00000563060.6@ALDOA ENST00000563060.6 protein_coding 30064274,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117 30064505,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070414 Gene ID= ENSG00000149925.17 TPM= 257.49 Transcript Type= protein_coding chr16 30065148 30070420 30065148 30070420 + ENST00000564546.5@ALDOA ENST00000564546.5 protein_coding 30065148,30067234,30067450,30068646,30068818,30069306,30069499,30069830,30070117 30065927,30067366,30067661,30068700,30068978,30069389,30069673,30070029,30070420 Gene ID= ENSG00000149925.17 TPM= 2576.14 Transcript Type= protein_coding chr16 30075990 30085377 30075990 30085377 + ENST00000279387.11@PPP4C ENST00000279387.11 protein_coding 30075990,30076315,30081259,30082484,30082746,30083394,30083655,30084666,30084933 30076094,30076475,30081310,30082534,30082847,30083567,30083781,30084855,30085377 Gene ID= ENSG00000149923.13 TPM= 271.66 Transcript Type= protein_coding chr16 30076023 30085356 30076023 30085356 + ENST00000627746.2@PPP4C ENST00000627746.2 protein_coding 30076023,30076315,30082484,30082746,30083394,30083655,30084666,30084933 30076094,30076475,30082534,30082847,30083567,30083781,30084855,30085356 Gene ID= ENSG00000149923.13 TPM= 9.96 Transcript Type= protein_coding chr16 30076007 30085347 30076007 30085347 + ENST00000563200.5@PPP4C ENST00000563200.5 protein_coding 30076007,30076315,30081259,30082484,30082746,30083394,30084666,30084933 30076094,30076475,30081310,30082534,30082847,30083781,30084855,30085347 Gene ID= ENSG00000149923.13 TPM= 2.72 Transcript Type= retained_intron chr16 30076225 30085318 30076225 30085318 + ENST00000561610.1@PPP4C ENST00000561610.1 protein_coding 30076225,30081259,30082484,30082746,30083394,30083655,30084666,30084933 30076475,30081310,30082534,30082847,30083567,30083781,30084855,30085318 Gene ID= ENSG00000149923.13 TPM= 2.72 Transcript Type= protein_coding chr16 30092349 30096244 30092349 30096244 - ENST00000398838.8@YPEL3 ENST00000398838.8 protein_coding 30096097,30095252,30095103,30094789,30092349 30096244,30095434,30095146,30094897,30092799 Gene ID= ENSG00000090238.11 TPM= 109.57 Transcript Type= protein_coding chr16 30092314 30096200 30092314 30096200 - ENST00000398841.5@YPEL3 ENST00000398841.5 protein_coding 30095252,30095103,30094789,30092314 30096200,30095146,30094897,30092799 Gene ID= ENSG00000090238.11 TPM= 6.34 Transcript Type= protein_coding chr16 30114104 30123265 30114104 30123265 - transcript2296.chr16.nic@MAPK3 transcript2296.chr16.nic protein_coding 30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30115595,30114104 30123265,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30115645,30114708 Gene ID= ENSG00000102882.11 TPM= 38.03 Transcript Type= NA chr16 30114105 30123294 30114105 30123294 - ENST00000263025.8@MAPK3 ENST00000263025.8 protein_coding 30123040,30121824,30118349,30118047,30117670,30117154,30116894,30116636,30114105 30123294,30122006,30118538,30118163,30117784,30117285,30117003,30116790,30114708 Gene ID= ENSG00000102882.11 TPM= 116.66 Transcript Type= protein_coding chr16 30114106 30123309 30114106 30123309 - ENST00000322266.9@MAPK3 ENST00000322266.9 protein_coding 30123040,30121824,30118349,30118047,30117670,30116894,30116636,30114106 30123309,30122006,30118538,30118163,30117784,30117003,30116790,30114708 Gene ID= ENSG00000102882.11 TPM= 3.02 Transcript Type= protein_coding chr16 30114106 30122968 30114106 30122968 - ENST00000484663.5@MAPK3 ENST00000484663.5 protein_coding 30121824,30118349,30118047,30117670,30117154,30116894,30116636,30114106 30122968,30118538,30118163,30117784,30117285,30117003,30116790,30114708 Gene ID= ENSG00000102882.11 TPM= 5.28 Transcript Type= protein_coding chr16 30183422 30189076 30183422 30189076 + ENST00000219150.9@CORO1A ENST00000219150.9 protein_coding 30183422,30185209,30186598,30186816,30187039,30187382,30187725,30187942,30188192,30188361,30188860 30183725,30185407,30186720,30186945,30187223,30187501,30187829,30188087,30188249,30188576,30189076 Gene ID= ENSG00000102879.15 TPM= 44.37 Transcript Type= protein_coding chr16 30192934 30193666 30192934 30193666 - ENST00000569282.1@BOLA2B ENST00000569282.1 protein_coding 30193533,30193358,30192934 30193666,30193417,30193074 Gene ID= ENSG00000169627.7 TPM= 2.72 Transcript Type= protein_coding chr16 30192935 30194306 30192935 30194306 - ENST00000305321.4@BOLA2B ENST00000305321.4 protein_coding 30193533,30193358,30192935 30194306,30193455,30193074 Gene ID= ENSG00000169627.7 TPM= 16.3 Transcript Type= protein_coding chr16 30193887 30197531 30193887 30197531 + ENST00000565081.1@SLX1A ENST00000565081.1 protein_coding 30193887,30194886,30196974,30197270,30197437 30194791,30195227,30197101,30197357,30197531 Gene ID= ENSG00000132207.17 TPM= 4.98 Transcript Type= retained_intron chr16 30193917 30197561 30193917 30197561 + ENST00000251303.10@SLX1A ENST00000251303.10 protein_coding 30193917,30194740,30194886,30196974,30197270,30197437 30194272,30194791,30195227,30197101,30197357,30197561 Gene ID= ENSG00000132207.17 TPM= 32.15 Transcript Type= protein_coding chr16 30285023 30335374 30285023 30335374 - ENST00000411546.3@SMG1P5 ENST00000411546.3 transcribed_unprocessed_pseudogene 30334975,30305790,30305055,30301222,30299869,30298377,30294566,30294115,30293099,30291203,30288561,30286167,30285023 30335374,30305953,30305210,30301358,30299927,30298590,30294691,30294187,30293196,30291375,30288785,30286268,30285457 Gene ID= ENSG00000183604.14 TPM= 11.77 Transcript Type= processed_transcript chr16 30350766 30355361 30350766 30355361 - ENST00000305596.7@CD2BP2 ENST00000305596.7 protein_coding 30355212,30354604,30354184,30353901,30353368,30353181,30350766 30355361,30354707,30354322,30354058,30353800,30353287,30353095 Gene ID= ENSG00000169217.8 TPM= 166.62 Transcript Type= protein_coding chr16 30357102 30370264 30357102 30370264 - ENST00000409939.7@TBC1D10B ENST00000409939.7 protein_coding 30369228,30365495,30365105,30364900,30359727,30359538,30359172,30358663,30357102 30370264,30365594,30365212,30365006,30359841,30359603,30359361,30358817,30358573 Gene ID= ENSG00000169221.13 TPM= 39.84 Transcript Type= protein_coding chr16 30378137 30382813 30378137 30382813 - ENST00000563957.6@SEPT1 ENST00000563957.6 protein_coding 30382735,30382525,30382275,30382093,30381760,30379932,30379435,30379018,30378610,30378137 30382813,30382598,30382365,30382179,30381883,30381473,30379534,30379183,30378700,30378520 Gene ID= ENSG00000180096.11 TPM= 1.81 Transcript Type= retained_intron chr16 30395419 30400108 30395419 30400108 + ENST00000320159.2@ZNF48 ENST00000320159.2 protein_coding 30395419,30397330 30395873,30400108 Gene ID= ENSG00000180035.12 TPM= 4.98 Transcript Type= protein_coding chr16 30395112 30400107 30395112 30400107 + ENST00000613509.1@ZNF48 ENST00000613509.1 protein_coding 30395112,30395780,30397330 30395578,30395873,30400107 Gene ID= ENSG00000180035.12 TPM= 10.41 Transcript Type= protein_coding chr16 30423619 30430075 30423619 30430075 - ENST00000319285.4@DCTPP1 ENST00000319285.4 protein_coding 30429880,30429057,30423619 30430075,30429167,30424533 Gene ID= ENSG00000179958.8 TPM= 39.84 Transcript Type= protein_coding chr16 30472658 30523185 30472658 30523185 + ENST00000356798.10@ITGAL ENST00000356798.10 protein_coding 30472658,30474196,30475306,30475513,30479091,30479331,30481439,30483827,30484113,30489082,30489254,30494212,30494713,30496097,30496436,30499074,30499338,30504175,30505244,30505389,30506715,30510361,30510881,30511050,30513771,30516973,30517649,30517797,30518624,30519857,30521492 30472898,30474298,30475400,30475580,30479208,30479461,30481584,30483959,30484263,30489155,30489386,30494363,30494850,30496294,30496566,30499234,30499489,30504264,30505300,30505462,30506856,30510471,30510960,30511136,30513846,30517086,30517705,30517895,30518719,30519967,30523185 Gene ID= ENSG00000005844.17 TPM= 4.53 Transcript Type= protein_coding chr16 30524001 30526589 30524001 30526589 - ENST00000380412.6@ZNF768 ENST00000380412.6 protein_coding 30526326,30524001 30526589,30526051 Gene ID= ENSG00000169957.9 TPM= 7.24 Transcript Type= protein_coding chr16 30530367 30534918 30530367 30534918 - ENST00000395094.3@ZNF747 ENST00000395094.3 protein_coding 30534197,30530367 30534918,30533148 Gene ID= ENSG00000169955.7 TPM= 22.64 Transcript Type= protein_coding chr16 30534752 30537144 30534752 30537144 + ENST00000457283.3@AC002310.1 ENST00000457283.3 antisense_RNA 30534752,30536429 30535480,30537144 Gene ID= ENSG00000235560.3 TPM= 4.53 Transcript Type= antisense_RNA chr16 30553764 30558498 30553764 30558498 - ENST00000395091.2@ZNF764 ENST00000395091.2 protein_coding 30557987,30557733,30553764 30558498,30557846,30556107 Gene ID= ENSG00000169951.9 TPM= 13.58 Transcript Type= protein_coding chr16 30569672 30572734 30569672 30572734 - ENST00000563276.5@ZNF688 ENST00000563276.5 protein_coding 30572122,30571010,30569672 30572734,30571123,30570436 Gene ID= ENSG00000229809.8 TPM= 1.36 Transcript Type= protein_coding chr16 30569686 30571672 30569686 30571672 - ENST00000563665.3@ZNF688 ENST00000563665.3 protein_coding 30571010,30569686 30571672,30570436 Gene ID= ENSG00000229809.8 TPM= 2.26 Transcript Type= retained_intron chr16 30580656 30585771 30580656 30585771 - ENST00000395216.2@ZNF785 ENST00000395216.2 protein_coding 30585407,30585122,30580656 30585771,30585250,30583443 Gene ID= ENSG00000197162.9 TPM= 1.81 Transcript Type= protein_coding chr16 30602558 30610379 30602558 30610379 - ENST00000287461.7@ZNF689 ENST00000287461.7 protein_coding 30609837,30609525,30602558 30610379,30609638,30605447 Gene ID= ENSG00000156853.12 TPM= 19.92 Transcript Type= protein_coding chr16 30650778 30656413 30650778 30656413 + transcript2377.chr16.nic@PRR14 transcript2377.chr16.nic protein_coding 30650778,30651596,30651796,30652721,30652914,30653365,30654230,30654629,30655351,30655502,30655868,30656032 30650806,30651668,30651964,30652842,30653103,30653408,30654339,30655214,30655420,30655593,30655939,30656413 Gene ID= ENSG00000156858.11 TPM= 8.15 Transcript Type= NA chr16 30650778 30656413 30650778 30656413 + transcript2379.chr16.nnic@PRR14 transcript2379.chr16.nnic protein_coding 30650778,30651596,30651796,30652721,30652914,30653365,30654230,30655351,30655502,30655868,30656032 30650806,30651668,30651964,30652842,30653103,30653408,30654339,30655420,30655593,30655939,30656413 Gene ID= ENSG00000156858.11 TPM= 3.17 Transcript Type= NA chr16 30650867 30656440 30650867 30656440 + ENST00000300835.8@PRR14 ENST00000300835.8 protein_coding 30650867,30651596,30651796,30652721,30652914,30653365,30654230,30654629,30655351,30655502,30655868,30656032 30651127,30651668,30651964,30652842,30653103,30653408,30654339,30655214,30655420,30655593,30655939,30656440 Gene ID= ENSG00000156858.11 TPM= 14.04 Transcript Type= protein_coding chr16 30658431 30670814 30658431 30670814 + ENST00000356166.10@FBRS ENST00000356166.10 protein_coding 30658431,30660263,30661180,30661304,30662420,30662559,30664215,30664715,30665035,30665306,30665638,30666512,30666919,30667320,30667542,30668560,30668772,30669069 30659977,30660442,30661215,30661333,30662468,30662859,30664516,30664920,30665079,30665401,30665706,30666541,30666990,30667437,30667622,30668643,30668979,30670814 Gene ID= ENSG00000156860.15 TPM= 10.41 Transcript Type= protein_coding chr16 30664457 30670810 30664457 30670810 + ENST00000287468.5@FBRS ENST00000287468.5 protein_coding 30664457,30664715,30665035,30665306,30665638,30666512,30666919,30667320,30667542,30668560,30668772,30669069 30664516,30664920,30665079,30665401,30665706,30666541,30666990,30667437,30667622,30668643,30668979,30670810 Gene ID= ENSG00000156860.15 TPM= 21.28 Transcript Type= protein_coding chr16 30698235 30725362 30698235 30725362 + transcript2393.chr16.nic@SRCAP transcript2393.chr16.nic protein_coding 30698235,30699908,30700616,30704064,30707183,30707572,30709513,30709851,30710754,30710999,30711571,30711835,30712262,30712679,30713208,30713519,30716066,30716293,30720162,30720713,30721189,30722122,30722963,30723584 30698461,30699981,30700878,30704315,30707368,30707712,30709735,30710128,30710847,30711088,30711744,30712157,30712439,30712815,30713377,30713711,30716202,30716479,30720331,30720978,30721476,30722286,30723229,30725362 Gene ID= ENSG00000080603.16 TPM= 3.62 Transcript Type= NA chr16 30704067 30745169 30704067 30745169 + ENST00000380361.7@AC106886.5 ENST00000380361.7 protein_coding 30704067,30707183,30707572,30709513,30709851,30710754,30710999,30711571,30711835,30712262,30712679,30713208,30713519,30716066,30716293,30720162,30720713,30722122,30722963,30723584,30728966,30729370,30733280,30733602,30733894,30734496,30736200,30736541,30737049,30741741,30743782 30704315,30707368,30707712,30709735,30710128,30710847,30711088,30711744,30712157,30712439,30712815,30713377,30713711,30716202,30716479,30720331,30720978,30722286,30723229,30725082,30729231,30729572,30733449,30733798,30734008,30734615,30736394,30736624,30740707,30741908,30745169 Gene ID= ENSG00000282034.1 TPM= 18.11 Transcript Type= nonsense_mediated_decay chr16 30748406 30757363 30748406 30757363 + transcript2400.chr16.nic@PHKG2 transcript2400.chr16.nic protein_coding 30748406,30748803,30751106,30751549,30753232,30753394,30756182,30756367,30756590,30756804 30748490,30748915,30751217,30751603,30753297,30753557,30756272,30756520,30756715,30757363 Gene ID= ENSG00000156873.15 TPM= 2.94 Transcript Type= NA chr16 30748270 30761176 30748270 30761176 + ENST00000563588.5@PHKG2 ENST00000563588.5 protein_coding 30748270,30748803,30751106,30751549,30753232,30753394,30756182,30756367,30756590,30756804 30748490,30748915,30751281,30751603,30753297,30753557,30756272,30756520,30756715,30761176 Gene ID= ENSG00000156873.15 TPM= 48.22 Transcript Type= protein_coding chr16 30748289 30757363 30748289 30757363 + transcript2404.chr16.nnic@PHKG2 transcript2404.chr16.nnic protein_coding 30748289,30748803,30751106,30753232,30753394,30756182,30756367,30756590,30756804 30748490,30748915,30751217,30753297,30753557,30756272,30756520,30756715,30757363 Gene ID= ENSG00000156873.15 TPM= 2.04 Transcript Type= NA chr16 30748384 30757363 30748384 30757363 + transcript2407.chr16.nic@PHKG2 transcript2407.chr16.nic protein_coding 30748384,30748803,30751106,30751549,30753232,30753394,30756182,30756367,30756804 30748490,30748915,30751281,30751603,30753297,30753557,30756272,30756715,30757363 Gene ID= ENSG00000156873.15 TPM= 3.17 Transcript Type= NA chr16 30748403 30757363 30748403 30757363 + transcript2408.chr16.nnic@PHKG2 transcript2408.chr16.nnic protein_coding 30748403,30748803,30751106,30753232,30753394,30756182,30756367,30756590,30756804 30748490,30748915,30751281,30753297,30753557,30756272,30756520,30756715,30757363 Gene ID= ENSG00000156873.15 TPM= 2.04 Transcript Type= NA chr16 30748396 30757363 30748396 30757363 + transcript2411.chr16.nic@PHKG2 transcript2411.chr16.nic protein_coding 30748396,30748803,30751106,30753232,30753394,30756182,30756367,30756804 30748490,30748915,30751603,30753297,30753557,30756272,30756715,30757363 Gene ID= ENSG00000156873.15 TPM= 4.07 Transcript Type= NA chr16 30748409 30755240 30748409 30755240 + transcript2415.chr16.nic@PHKG2 transcript2415.chr16.nic protein_coding 30748409,30748803,30751106,30751549,30753232,30753394,30754875 30748490,30748915,30751281,30751603,30753297,30753557,30755240 Gene ID= ENSG00000156873.15 TPM= 1.81 Transcript Type= NA chr16 30748443 30757334 30748443 30757334 + ENST00000563913.5@PHKG2 ENST00000563913.5 protein_coding 30748443,30748803,30751106,30753232,30753394,30756182,30756367,30756590,30756804 30748490,30748915,30751603,30753297,30753557,30756272,30756520,30756715,30757334 Gene ID= ENSG00000156873.15 TPM= 2.72 Transcript Type= retained_intron chr16 30762287 30776306 30762287 30776306 + transcript2425.chr16.nic@RNF40 transcript2425.chr16.nic protein_coding 30762287,30762475,30763118,30763418,30764179,30764938,30765181,30765425,30766163,30766379,30766741,30767894,30768103,30768619,30768838,30769186,30769475,30771833,30772089,30773938 30762398,30762677,30763285,30763559,30764385,30765059,30765327,30765499,30766282,30766558,30766876,30768015,30768530,30768736,30768987,30769398,30769600,30771973,30772190,30776306 Gene ID= ENSG00000103549.21 TPM= 56.64 Transcript Type= NA chr16 30762312 30776305 30762312 30776305 + transcript2427.chr16.nic@RNF40 transcript2427.chr16.nic protein_coding 30762312,30762475,30763118,30763418,30764179,30764938,30765181,30765425,30766163,30766379,30766741,30767894,30768103,30768619,30768838,30769186,30769475,30771833,30773938 30762360,30762677,30763285,30763559,30764385,30765059,30765327,30765499,30766282,30766558,30766876,30768015,30768530,30768736,30768987,30769398,30769600,30772190,30776305 Gene ID= ENSG00000103549.21 TPM= 7.74 Transcript Type= NA chr16 30778449 30787202 30778449 30787202 - ENST00000262525.5@ZNF629 ENST00000262525.5 protein_coding 30787028,30784410,30778449 30787202,30784515,30784254 Gene ID= ENSG00000102870.5 TPM= 7.24 Transcript Type= protein_coding chr16 30887796 30894072 30887796 30894072 - transcript2439.chr16.nnic@BCL7C transcript2439.chr16.nnic protein_coding 30893853,30893212,30892840,30892586,30889235,30888860,30887796 30894072,30893290,30892948,30892747,30889277,30888945,30887990 Gene ID= ENSG00000099385.11 TPM= 1.81 Transcript Type= NA chr16 30887795 30894960 30887795 30894960 - ENST00000215115.4@BCL7C ENST00000215115.4 protein_coding 30893853,30893212,30892840,30892586,30888860,30887795 30894960,30893290,30892948,30892747,30888945,30887990 Gene ID= ENSG00000099385.11 TPM= 65.2 Transcript Type= protein_coding chr16 30896585 30903535 30896585 30903535 + transcript2449.chr16.nnic@CTF1 transcript2449.chr16.nnic protein_coding 30896585,30899415,30902078,30902816 30896668,30899533,30902611,30903535 Gene ID= ENSG00000150281.6 TPM= 2.72 Transcript Type= NA chr16 30896614 30903541 30896614 30903541 + transcript2452.chr16.nnic@CTF1 transcript2452.chr16.nnic protein_coding 30896614,30899307,30902078 30896668,30899533,30903541 Gene ID= ENSG00000150281.6 TPM= 8.15 Transcript Type= NA chr16 30949041 30956527 30949041 30956527 + transcript2456.chr16.nic@AC135048.1 transcript2456.chr16.nic processed_transcript 30949041,30953185,30956200 30949517,30953460,30956527 Gene ID= ENSG00000261487.1 TPM= 26.26 Transcript Type= NA chr16 30949066 30954938 30949066 30954938 + ENST00000318663.4@ORAI3 ENST00000318663.4 protein_coding 30949066,30953185 30949517,30954938 Gene ID= ENSG00000175938.6 TPM= 185.64 Transcript Type= protein_coding chr16 30949152 30956461 30949152 30956461 + ENST00000562699.1@ORAI3 ENST00000562699.1 protein_coding 30949152,30956200 30949517,30956461 Gene ID= ENSG00000175938.6 TPM= 1.81 Transcript Type= protein_coding chr16 30985177 30989152 30985177 30989152 + transcript2461.chr16.nnic@HSD3B7 transcript2461.chr16.nnic protein_coding 30985177,30985484,30986049,30986423,30986605,30986840,30987768 30985297,30985824,30986204,30986531,30986704,30987002,30989152 Gene ID= ENSG00000099377.13 TPM= 30.15 Transcript Type= NA chr16 30985193 30989152 30985193 30989152 + transcript2470.chr16.nnic@HSD3B7 transcript2470.chr16.nnic protein_coding 30985193,30986423,30986840,30987768 30985297,30986704,30987002,30989152 Gene ID= ENSG00000099377.13 TPM= 4.35 Transcript Type= NA chr16 30985211 30989152 30985211 30989152 + ENST00000297679.9@HSD3B7 ENST00000297679.9 protein_coding 30985211,30985653,30986049,30986423,30986605,30986840,30987768 30985297,30985824,30986204,30986531,30986704,30987002,30989152 Gene ID= ENSG00000099377.13 TPM= 84.94 Transcript Type= protein_coding chr16 31033491 31040168 31033491 31040168 + ENST00000313843.7@STX4 ENST00000313843.7 protein_coding 31033491,31034013,31034226,31034462,31034970,31037926,31038114,31038510,31039541,31039723,31039912 31033835,31034114,31034325,31034536,31035040,31038034,31038190,31038647,31039651,31039818,31040168 Gene ID= ENSG00000103496.14 TPM= 36.22 Transcript Type= protein_coding chr16 31033606 31034853 31033606 31034853 + ENST00000565483.1@STX4 ENST00000565483.1 protein_coding 31033606,31034013,31034204,31034462 31033835,31034114,31034325,31034853 Gene ID= ENSG00000103496.14 TPM= 6.34 Transcript Type= retained_intron chr16 31060848 31073502 31060848 31073502 - ENST00000538906.5@ZNF668 ENST00000538906.5 protein_coding 31072740,31063813,31060848 31073502,31064481,31062280 Gene ID= ENSG00000167394.12 TPM= 2.72 Transcript Type= protein_coding chr16 31060843 31065088 31060843 31065088 - ENST00000535577.5@ZNF668 ENST00000535577.5 protein_coding 31064800,31063813,31060843 31065088,31064481,31062280 Gene ID= ENSG00000167394.12 TPM= 3.62 Transcript Type= protein_coding chr16 31090842 31094957 31090842 31094957 - ENST00000394975.2@VKORC1 ENST00000394975.2 protein_coding 31094557,31093312,31090842 31094957,31093421,31091342 Gene ID= ENSG00000167397.14 TPM= 113.19 Transcript Type= protein_coding chr16 31090842 31094956 31090842 31094956 - ENST00000354895.4@VKORC1 ENST00000354895.4 protein_coding 31094557,31090842 31094956,31091342 Gene ID= ENSG00000167397.14 TPM= 14.49 Transcript Type= protein_coding chr16 31108493 31112840 31108493 31112840 + transcript2494.chr16.nic@BCKDK transcript2494.chr16.nic protein_coding 31108493,31109047,31109511,31109673,31110077,31110205,31110401,31110688,31111091,31111300,31111869,31112121 31108766,31109418,31109579,31109783,31110124,31110324,31110499,31110761,31111219,31111389,31112027,31112840 Gene ID= ENSG00000103507.13 TPM= 21.13 Transcript Type= NA chr16 31108449 31112566 31108449 31112566 + ENST00000566568.1@BCKDK ENST00000566568.1 protein_coding 31108449,31109047,31109511,31109673,31110205,31110401,31111300,31111869,31112121 31108479,31109418,31109579,31110124,31110324,31111219,31111389,31112027,31112566 Gene ID= ENSG00000103507.13 TPM= 1.66 Transcript Type= retained_intron chr16 31115754 31131393 31115754 31131393 + ENST00000543774.6@KAT8 ENST00000543774.6 protein_coding 31115754,31117463,31120186,31120339,31127035,31127189,31128050,31130017,31130267,31130456,31130746,31131195 31115869,31117892,31120260,31120514,31127088,31127353,31128139,31130157,31130360,31130606,31130900,31131393 Gene ID= ENSG00000103510.19 TPM= 37.13 Transcript Type= protein_coding chr16 31138925 31150094 31138925 31150094 - ENST00000268281.8@PRSS36 ENST00000268281.8 protein_coding 31149999,31149696,31149463,31149073,31148395,31145789,31143588,31143342,31142737,31142481,31141723,31141469,31140492,31140294,31138925 31150094,31149731,31149498,31149235,31148675,31145955,31143837,31143471,31142993,31142644,31141960,31141610,31140757,31140415,31139416 Gene ID= ENSG00000178226.10 TPM= 4.98 Transcript Type= protein_coding chr16 31138928 31149534 31138928 31149534 - ENST00000562368.5@PRSS36 ENST00000562368.5 protein_coding 31149463,31149073,31148395,31145789,31143588,31143342,31142737,31142481,31141723,31141469,31140492,31140294,31138928 31149534,31149235,31148712,31145955,31143837,31143471,31142993,31142644,31141960,31141610,31140757,31140415,31139416 Gene ID= ENSG00000178226.10 TPM= 1.36 Transcript Type= retained_intron chr16 31180110 31194871 31180110 31194871 + ENST00000254108.11@FUS ENST00000254108.11 protein_coding 31180110,31182398,31182513,31183858,31184209,31184939,31186802,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399 31180227,31182422,31182664,31184002,31184396,31185179,31186836,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31194871 Gene ID= ENSG00000089280.18 TPM= 48.45 Transcript Type= protein_coding chr16 31180138 31191602 31180138 31191602 + ENST00000566605.5@FUS ENST00000566605.5 protein_coding 31180138,31182398,31182513,31183858,31184209,31184939,31188325,31189123,31189665,31190040,31190275,31190742,31190963,31191399 31180227,31182422,31182664,31184002,31184396,31185179,31188357,31189226,31189794,31190141,31190398,31190842,31191110,31191602 Gene ID= ENSG00000089280.18 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr16 31201485 31202992 31201485 31202992 - ENST00000247470.9@PYCARD ENST00000247470.9 protein_coding 31202417,31202147,31201485 31202992,31202203,31201841 Gene ID= ENSG00000103490.13 TPM= 26.26 Transcript Type= protein_coding chr16 31259973 31332868 31259973 31332868 + transcript2528.chr16.nnic@ITGAM transcript2528.chr16.nnic protein_coding 31259973,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297745,31321241,31321464,31324399,31324651,31324958,31325263,31325500,31326856,31328147,31329228,31329798,31330081,31330308,31330504,31331165,31331636,31332238 31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324553,31324782,31325031,31325404,31325622,31326935,31328230,31329303,31329905,31330164,31330421,31330605,31331275,31331802,31332868 Gene ID= ENSG00000169896.16 TPM= 3.62 Transcript Type= NA chr16 31259994 31332892 31259994 31332892 + ENST00000544665.7@ITGAM ENST00000544665.7 protein_coding 31259994,31261692,31265395,31265811,31266030,31270954,31271847,31273365,31275549,31276671,31276920,31277967,31297514,31297742,31321241,31321464,31324399,31324651,31324958,31325263,31325500,31326856,31328147,31329228,31329798,31330081,31330308,31330504,31331165,31331636 31260092,31261797,31265498,31265881,31266147,31271084,31271992,31273518,31275699,31276744,31277049,31278109,31297654,31297954,31321371,31321627,31324553,31324782,31325031,31325404,31325622,31326935,31328230,31329303,31329905,31330164,31330421,31330605,31331275,31332892 Gene ID= ENSG00000169896.16 TPM= 21.73 Transcript Type= protein_coding chr16 31472059 31477958 31472059 31477958 + ENST00000394863.7@TGFB1I1 ENST00000394863.7 protein_coding 31472059,31473441,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310 31472201,31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958 Gene ID= ENSG00000140682.18 TPM= 69.27 Transcript Type= protein_coding chr16 31472175 31477961 31472175 31477961 + transcript2542.chr16.nic@TGFB1I1 transcript2542.chr16.nic protein_coding 31472175,31473441,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310 31472201,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477961 Gene ID= ENSG00000140682.18 TPM= 3.62 Transcript Type= NA chr16 31473426 31477958 31473426 31477958 + ENST00000567607.5@TGFB1I1 ENST00000567607.5 protein_coding 31473426,31473682,31473835,31474152,31474350,31474563,31476012,31476481,31476862,31477310 31473556,31473734,31473977,31474239,31474455,31474757,31476185,31476562,31477010,31477958 Gene ID= ENSG00000140682.18 TPM= 5.89 Transcript Type= protein_coding chr16 31489466 31508415 31489466 31508415 - transcript2549.chr16.nic@C16orf58 transcript2549.chr16.nic protein_coding 31508074,31507764,31500686,31499493,31499302,31496849,31493866,31493467,31492978,31492197,31492009,31489466 31508415,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31493048,31492340,31492086,31490932 Gene ID= ENSG00000140688.16 TPM= 5.75 Transcript Type= NA chr16 31489466 31508415 31489466 31508415 - transcript2551.chr16.nic@C16orf58 transcript2551.chr16.nic protein_coding 31508074,31507764,31500686,31499493,31499302,31496849,31493866,31492978,31492197,31492009,31489466 31508415,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31492340,31492086,31490932 Gene ID= ENSG00000140688.16 TPM= 15.71 Transcript Type= NA chr16 31489489 31508413 31489489 31508413 - ENST00000327237.6@C16orf58 ENST00000327237.6 protein_coding 31508074,31507764,31500686,31499493,31499302,31496849,31493866,31493603,31493467,31492978,31492197,31492009,31489489 31508413,31507878,31500731,31499525,31499407,31496950,31493936,31493787,31493524,31493048,31492340,31492086,31490932 Gene ID= ENSG00000140688.16 TPM= 123.7 Transcript Type= protein_coding chr16 31508471 31509256 31508471 31509256 + ENST00000569782.2@AC026471.2 ENST00000569782.2 antisense_RNA 31508471,31509168 31509036,31509256 Gene ID= ENSG00000260625.2 TPM= 1.81 Transcript Type= antisense_RNA chr16 31713234 31761565 31713234 31761565 + ENST00000316491.13@ZNF720 ENST00000316491.13 protein_coding 31713234,31722626,31723258,31753766,31759357 31713435,31722752,31723353,31753900,31761565 Gene ID= ENSG00000197302.10 TPM= 6.34 Transcript Type= protein_coding chr16 31713232 31759841 31713232 31759841 + ENST00000539915.5@ZNF720 ENST00000539915.5 protein_coding 31713232,31753766,31759357 31713448,31753900,31759841 Gene ID= ENSG00000197302.10 TPM= 1.81 Transcript Type= protein_coding chr16 31713247 31794869 31713247 31794869 + ENST00000531864.6@ZNF720 ENST00000531864.6 protein_coding 31713247,31753766,31792630,31793335,31793702 31713435,31753900,31792730,31793411,31794869 Gene ID= ENSG00000197302.10 TPM= 1.81 Transcript Type= processed_transcript chr16 31873758 31917357 31873758 31917357 + ENST00000300870.14@ZNF267 ENST00000300870.14 protein_coding 31873758,31884498,31885161,31914476 31873969,31884624,31885256,31917357 Gene ID= ENSG00000185947.14 TPM= 12.68 Transcript Type= protein_coding chr16 46580554 46621626 46580554 46621626 - ENST00000303383.7@SHCBP1 ENST00000303383.7 protein_coding 46621257,46618205,46617634,46615946,46608297,46604228,46603975,46603539,46599831,46595552,46584003,46583516,46580554 46621626,46618372,46617749,46616154,46608389,46604461,46604143,46603659,46599962,46595670,46584089,46583657,46582054 Gene ID= ENSG00000171241.8 TPM= 2.72 Transcript Type= protein_coding chr16 46660213 46689228 46660213 46689228 - transcript2573.chr16.nic@VPS35 transcript2573.chr16.nic protein_coding 46689131,46683508,46681377,46680671,46678943,46677315,46676583,46674564,46674314,46672265,46671705,46668930,46662983,46662243,46661718,46660213 46689228,46683606,46681520,46680853,46679156,46677398,46676692,46674660,46674462,46672472,46671860,46669052,46663162,46662482,46661861,46660651 Gene ID= ENSG00000069329.16 TPM= 9.96 Transcript Type= NA chr16 46689646 46698394 46689646 46698394 + ENST00000219097.6@ORC6 ENST00000219097.6 protein_coding 46689646,46690991,46692382,46693093,46695562,46696017,46697458 46689770,46691120,46692545,46693182,46695674,46696085,46698394 Gene ID= ENSG00000091651.8 TPM= 1.81 Transcript Type= protein_coding chr16 46802094 46831411 46802094 46831411 - ENST00000285697.8@C16orf87 ENST00000285697.8 protein_coding 46831084,46824386,46809603,46802094 46831411,46824482,46809785,46803070 Gene ID= ENSG00000155330.9 TPM= 12.68 Transcript Type= protein_coding chr16 46884378 46931297 46884378 46931297 + ENST00000340124.8@GPT2 ENST00000340124.8 protein_coding 46884378,46884694,46897648,46900682,46906842,46909684,46916628,46918621,46922242,46924389,46926925,46928907 46884467,46884958,46897737,46900790,46906975,46909927,46916707,46918757,46922416,46924544,46927037,46931297 Gene ID= ENSG00000166123.13 TPM= 102.33 Transcript Type= protein_coding chr16 46955362 46973788 46955362 46973788 - ENST00000317089.9@DNAJA2 ENST00000317089.9 protein_coding 46973495,46971896,46971349,46968084,46967513,46964611,46959275,46959003,46955362 46973788,46971955,46971572,46968164,46967646,46964807,46959419,46959130,46957220 Gene ID= ENSG00000069345.11 TPM= 122.7 Transcript Type= protein_coding chr16 47081643 47144026 47081643 47144026 - transcript2594.chr16.nic@NETO2 transcript2594.chr16.nic protein_coding 47143579,47131969,47129224,47128325,47122889,47122657,47109483,47081643 47144026,47132025,47129364,47128573,47122912,47122784,47109711,47083801 Gene ID= ENSG00000171208.9 TPM= 6.34 Transcript Type= NA chr16 47154387 47461274 47154387 47461274 - ENST00000320640.10@ITFG1 ENST00000320640.10 protein_coding 47460838,47459103,47454013,47452733,47451396,47428804,47375876,47365788,47313729,47311240,47260545,47258632,47237965,47218868,47162540,47161750,47158873,47154387 47461274,47459175,47454158,47452790,47451470,47428898,47375940,47365869,47313823,47311412,47260695,47258740,47238008,47218946,47162664,47161832,47158990,47155778 Gene ID= ENSG00000129636.12 TPM= 272.48 Transcript Type= protein_coding chr16 47461297 47701521 47461297 47701521 + transcript2597.chr16.nic@PHKB transcript2597.chr16.nic protein_coding 47461297,47463899,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229 47461426,47463993,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47701521 Gene ID= ENSG00000102893.15 TPM= 82.63 Transcript Type= NA chr16 47461326 47701523 47461326 47701523 + ENST00000299167.12@PHKB ENST00000299167.12 protein_coding 47461326,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229 47461426,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47701523 Gene ID= ENSG00000102893.15 TPM= 40.07 Transcript Type= protein_coding chr16 47461295 47699745 47461295 47699745 + ENST00000566044.5@PHKB ENST00000566044.5 protein_coding 47461295,47463882,47497399,47499756,47502991,47511665,47515521,47547433,47580295,47587668,47588905,47593500,47594137,47596373,47610826,47641035,47641599,47648533,47649100,47650544,47650831,47660506,47660657,47661719,47663677,47665942,47669215,47689041,47693378,47696381,47698448,47699229 47461426,47463993,47497488,47499894,47503090,47511772,47515601,47547548,47580358,47587763,47589102,47593557,47594214,47596531,47610920,47641090,47641692,47648616,47649204,47650626,47650921,47660567,47660819,47661800,47663734,47666032,47669417,47689175,47693507,47696488,47698588,47699745 Gene ID= ENSG00000102893.15 TPM= 32.6 Transcript Type= protein_coding chr16 48360531 48365901 48360531 48365901 - ENST00000356721.3@SIAH1 ENST00000356721.3 protein_coding 48365387,48360531 48365901,48362430 Gene ID= ENSG00000196470.11 TPM= 1.81 Transcript Type= protein_coding chr16 48360531 48385450 48360531 48385450 - ENST00000394725.2@SIAH1 ENST00000394725.2 protein_coding 48385204,48360531 48385450,48362430 Gene ID= ENSG00000196470.11 TPM= 27.17 Transcript Type= protein_coding chr16 48538726 48610209 48538726 48610209 - ENST00000262384.3@N4BP1 ENST00000262384.3 protein_coding 48609775,48560754,48553539,48551386,48548007,48546147,48538726 48610209,48562444,48553669,48551482,48548114,48546254,48543261 Gene ID= ENSG00000102921.7 TPM= 14.49 Transcript Type= protein_coding chr16 50024410 50037088 50024410 50037088 + ENST00000458059.7@CNEP1R1 ENST00000458059.7 protein_coding 50024410,50025651,50026396,50029725,50033397,50034102,50035417 50025340,50025701,50026467,50029798,50033506,50034156,50037088 Gene ID= ENSG00000205423.11 TPM= 4.98 Transcript Type= protein_coding chr16 50025206 50037087 50025206 50037087 + ENST00000427478.6@CNEP1R1 ENST00000427478.6 protein_coding 50025206,50026396,50029725,50033397,50034102,50035417 50025340,50026467,50029798,50033506,50034156,50037087 Gene ID= ENSG00000205423.11 TPM= 8.6 Transcript Type= protein_coding chr16 50065941 50106387 50065941 50106387 + ENST00000299192.7@HEATR3 ENST00000299192.7 protein_coding 50065941,50066367,50068780,50070178,50072605,50075571,50078741,50083937,50084134,50084569,50086215,50094705,50100230,50102259,50104939 50066269,50066539,50068867,50070290,50072714,50075711,50079018,50084027,50084291,50084651,50086351,50094793,50100373,50102435,50106387 Gene ID= ENSG00000155393.12 TPM= 1.81 Transcript Type= protein_coding chr16 50319025 50369046 50319025 50369046 - transcript2670.chr16.nnic@BRD7 transcript2670.chr16.nnic protein_coding 50368726,50368090,50354793,50354425,50350023,50339976,50334711,50333574,50328669,50325748,50323587,50321982,50320663,50320248,50319887,50319025 50369046,50368298,50354922,50354482,50350167,50340086,50334895,50333697,50328744,50325883,50323698,50322038,50320774,50320391,50320030,50319266 Gene ID= ENSG00000166164.15 TPM= 4.53 Transcript Type= NA chr16 50548330 50649249 50548330 50649249 + ENST00000268459.5@NKD1 ENST00000268459.5 protein_coding 50548330,50548717,50549422,50608294,50621602,50625485,50630186,50630826,50632281,50633192 50548578,50548749,50549555,50608360,50621708,50625580,50630333,50630910,50632408,50649249 Gene ID= ENSG00000140807.6 TPM= 7.24 Transcript Type= protein_coding chr16 50671625 50681352 50671625 50681352 - ENST00000330943.8@SNX20 ENST00000330943.8 protein_coding 50681190,50677397,50675770,50671625 50681352,50677535,50675921,50674074 Gene ID= ENSG00000167208.14 TPM= 9.06 Transcript Type= protein_coding chr16 50693586 50733312 50693586 50733312 + transcript2678.chr16.nic@NOD2 transcript2678.chr16.nic protein_coding 50693586,50699488,50707855,50710558,50716587,50716891,50719925,50722622,50723301,50725489,50729818,50731747 50693662,50699954,50707960,50712373,50716670,50716974,50720008,50722705,50723384,50725572,50729901,50733312 Gene ID= ENSG00000167207.12 TPM= 2.72 Transcript Type= NA chr16 50742119 50797155 50742119 50797155 + transcript2680.chr16.nnic@CYLD transcript2680.chr16.nnic protein_coding 50742119,50742762,50744730,50749576,50751604,50754319,50775166,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324 50742662,50742841,50744866,50750202,50751906,50754424,50775174,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50797155 Gene ID= ENSG00000083799.17 TPM= 2.49 Transcript Type= NA chr16 50742120 50796888 50742120 50796888 + transcript2682.chr16.nic@CYLD transcript2682.chr16.nic protein_coding 50742120,50742762,50744730,50749576,50751604,50754319,50775166,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324 50742216,50742841,50744866,50750202,50751906,50754424,50775174,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796888 Gene ID= ENSG00000083799.17 TPM= 4.3 Transcript Type= NA chr16 50742120 50796888 50742120 50796888 + transcript2692.chr16.nnic@CYLD transcript2692.chr16.nnic protein_coding 50742120,50742762,50749649,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324 50742216,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796888 Gene ID= ENSG00000083799.17 TPM= 2.94 Transcript Type= NA chr16 50742120 50787749 50742120 50787749 + transcript2695.chr16.nic@CYLD transcript2695.chr16.nic protein_coding 50742120,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855 50742216,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50787749 Gene ID= ENSG00000083799.17 TPM= 1.81 Transcript Type= NA chr16 50742050 50796881 50742050 50796881 + ENST00000569418.5@CYLD ENST00000569418.5 protein_coding 50742050,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324 50742124,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796881 Gene ID= ENSG00000083799.17 TPM= 5.89 Transcript Type= protein_coding chr16 50742120 50796882 50742120 50796882 + ENST00000398568.6@CYLD ENST00000398568.6 protein_coding 50742120,50742762,50749576,50751604,50754319,50776179,50777825,50779665,50781246,50782325,50784329,50786855,50787786,50791558,50792597,50793546,50794212,50796324 50742216,50742841,50750202,50751906,50754424,50776277,50777941,50780044,50781411,50782466,50784451,50786946,50787852,50791690,50792705,50793664,50794428,50796882 Gene ID= ENSG00000083799.17 TPM= 9.73 Transcript Type= protein_coding chr16 53434440 53491647 53434440 53491647 + transcript2698.chr16.nnic@RBL2 transcript2698.chr16.nnic protein_coding 53434440,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130,53490515 53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53490301,53491647 Gene ID= ENSG00000103479.15 TPM= 2.72 Transcript Type= NA chr16 53434420 53491649 53434420 53491649 + ENST00000262133.10@RBL2 ENST00000262133.10 protein_coding 53434420,53439016,53442658,53447042,53451703,53453452,53453705,53454656,53459451,53461741,53462552,53464226,53465438,53467058,53469916,53470383,53470746,53479154,53479886,53480567,53481671,53490130 53434796,53439146,53442858,53447106,53451831,53453612,53453769,53454842,53459617,53461850,53462655,53464363,53465602,53467169,53470185,53470663,53470922,53479225,53479991,53480769,53481835,53491649 Gene ID= ENSG00000103479.15 TPM= 20.83 Transcript Type= protein_coding chr16 53491041 53503248 53491041 53503248 - transcript2706.chr16.nic@AKTIP transcript2706.chr16.nic protein_coding 53502700,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53491041 53503248,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492522 Gene ID= ENSG00000166971.16 TPM= 13.58 Transcript Type= NA chr16 53491040 53503251 53491040 53503251 - ENST00000394657.11@AKTIP ENST00000394657.11 protein_coding 53503147,53500218,53498391,53495262,53495073,53494517,53494339,53494138,53492693,53491040 53503251,53500329,53498596,53495326,53495173,53494605,53494437,53494245,53492753,53492519 Gene ID= ENSG00000166971.16 TPM= 9.96 Transcript Type= protein_coding chr16 53597683 53703889 53597683 53703889 - ENST00000262135.8@RPGRIP1L ENST00000262135.8 protein_coding 53703803,53700639,53696151,53692066,53687863,53686433,53675017,53672870,53671510,53664870,53658772,53658414,53657453,53656472,53652535,53648964,53645625,53641285,53641033,53637695,53636439,53619025,53610967,53605481,53597683 53703889,53700730,53696295,53692364,53687965,53686576,53675122,53673016,53671583,53665009,53658878,53658464,53657632,53656589,53652987,53649115,53646003,53641475,53641116,53637854,53636512,53619208,53611051,53605614,53602188 Gene ID= ENSG00000103494.12 TPM= 1.81 Transcript Type= protein_coding chr16 53695631 53703938 53695631 53703938 - ENST00000566096.5@RPGRIP1L ENST00000566096.5 protein_coding 53703803,53700639,53695631 53703938,53700730,53696295 Gene ID= ENSG00000103494.12 TPM= 5.43 Transcript Type= protein_coding chr16 53703963 54121941 53703963 54121941 + ENST00000471389.5@FTO ENST00000471389.5 protein_coding 53703963,53810140,53825864,53844155,53873786,53879844,53888832,53933985,54111762 53704229,53810217,53826491,53844298,53873865,53879987,53888951,53934109,54121941 Gene ID= ENSG00000140718.20 TPM= 18.11 Transcript Type= protein_coding chr16 54283304 54286763 54283304 54286763 - ENST00000329734.3@IRX3 ENST00000329734.3 protein_coding 54285784,54284497,54284246,54283304 54286763,54285613,54284312,54283740 Gene ID= ENSG00000177508.11 TPM= 36.22 Transcript Type= protein_coding chr16 54918884 54929139 54918884 54929139 - transcript2722.chr16.nic@CRNDE transcript2722.chr16.nic lincRNA 54928770,54925101,54923585,54920298,54918884 54929139,54925213,54923650,54920327,54919209 Gene ID= ENSG00000245694.9 TPM= 1.81 Transcript Type= NA chr16 54930862 54934485 54930862 54934485 + ENST00000394636.8@IRX5 ENST00000394636.8 protein_coding 54930862,54932498,54933077 54931447,54932903,54934485 Gene ID= ENSG00000176842.14 TPM= 4.53 Transcript Type= protein_coding chr16 55479172 55506240 55479172 55506240 + transcript2727.chr16.nnic@MMP2 transcript2727.chr16.nnic protein_coding 55479172,55479562,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339 55479280,55479632,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506240 Gene ID= ENSG00000087245.12 TPM= 8.15 Transcript Type= NA chr16 55478971 55506691 55478971 55506691 + ENST00000219070.8@MMP2 ENST00000219070.8 protein_coding 55478971,55482909,55484016,55485299,55485604,55488543,55489651,55491801,55493158,55496926,55498289,55502779,55505339 55479632,55483135,55484164,55485427,55485777,55488716,55489824,55491956,55493293,55497062,55498448,55502888,55506691 Gene ID= ENSG00000087245.12 TPM= 259.89 Transcript Type= protein_coding chr16 55508998 55586670 55508998 55586670 + ENST00000262134.9@LPCAT2 ENST00000262134.9 protein_coding 55508998,55525508,55528377,55529835,55531914,55532824,55534443,55537578,55545735,55549277,55550949,55574631,55579109,55582914 55509352,55525647,55528594,55529947,55531974,55532882,55534477,55537632,55545817,55549402,55551102,55574729,55579244,55586670 Gene ID= ENSG00000087253.12 TPM= 20.83 Transcript Type= protein_coding chr16 55802853 55833158 55802853 55833158 - ENST00000360526.7@CES1 ENST00000360526.7 protein_coding 55833004,55828767,55826151,55823550,55821368,55820372,55819535,55816924,55812903,55810927,55810517,55806333,55803529,55802853 55833158,55828974,55826295,55823683,55821521,55820479,55819639,55816962,55813043,55811010,55810664,55806464,55803601,55803232 Gene ID= ENSG00000198848.12 TPM= 26.26 Transcript Type= protein_coding chr16 56361452 56425538 56361452 56425538 - ENST00000290649.9@AMFR ENST00000290649.9 protein_coding 56425073,56414252,56409424,56407964,56405204,56404909,56402985,56401733,56389185,56385919,56369193,56367444,56363921,56361452 56425538,56414344,56409588,56408116,56405244,56405041,56403118,56401843,56389375,56386022,56369327,56367527,56364105,56363056 Gene ID= ENSG00000159461.14 TPM= 453.52 Transcript Type= protein_coding chr16 56429133 56451375 56429133 56451375 - ENST00000300291.9@NUDT21 ENST00000300291.9 protein_coding 56451087,56447789,56446626,56439657,56434754,56434331,56429133 56451375,56447989,56446689,56439746,56434829,56434445,56432733 Gene ID= ENSG00000167005.13 TPM= 54.33 Transcript Type= protein_coding chr16 56451490 56479100 56451490 56479100 + ENST00000566157.5@OGFOD1 ENST00000566157.5 protein_coding 56451490,56453263,56458548,56462534,56466152,56466876,56467165,56467905,56470003,56470487,56474828,56475507,56476044 56451766,56453408,56458594,56462634,56466268,56466967,56467293,56468018,56470082,56470791,56474950,56475565,56479100 Gene ID= ENSG00000087263.16 TPM= 47.99 Transcript Type= protein_coding chr16 56484347 56520049 56484347 56520049 - transcript2766.chr16.nic@BBS2 transcript2766.chr16.nic protein_coding 56519957,56514453,56511159,56510859,56509957,56506120,56505950,56502673,56502317,56501353,56500854,56499778,56498437,56497743,56496967,56485590,56484347 56520049,56514680,56511284,56510921,56510034,56506224,56506036,56502808,56502456,56501497,56501025,56499907,56498568,56497880,56497079,56485738,56484867 Gene ID= ENSG00000125124.11 TPM= 9.06 Transcript Type= NA chr16 56589368 56591088 56589368 56591088 + ENST00000200691.4@MT3 ENST00000200691.4 protein_coding 56589368,56589870,56590840 56589621,56589935,56591088 Gene ID= ENSG00000087250.8 TPM= 19.02 Transcript Type= protein_coding chr16 56608199 56609497 56608199 56609497 + ENST00000245185.5@MT2A ENST00000245185.5 protein_coding 56608199,56608992,56609263 56608683,56609057,56609497 Gene ID= ENSG00000125148.6 TPM= 571.4 Transcript Type= protein_coding chr16 56608690 56609497 56608690 56609497 + ENST00000567300.1@MT2A ENST00000567300.1 protein_coding 56608690,56608992,56609263 56608804,56609057,56609497 Gene ID= ENSG00000125148.6 TPM= 6.34 Transcript Type= processed_transcript chr16 56608584 56609476 56608584 56609476 + ENST00000563985.1@MT2A ENST00000563985.1 protein_coding 56608584,56609263 56609057,56609476 Gene ID= ENSG00000125148.6 TPM= 4.53 Transcript Type= processed_transcript chr16 56608606 56609494 56608606 56609494 + ENST00000561491.1@MT2A ENST00000561491.1 protein_coding 56608606,56608992 56608683,56609494 Gene ID= ENSG00000125148.6 TPM= 5.43 Transcript Type= protein_coding chr16 56617476 56618818 56617476 56618818 + ENST00000565768.1@MT1L ENST00000565768.1 transcribed_unitary_pseudogene 56617476,56618179,56618589 56617590,56618244,56618818 Gene ID= ENSG00000260549.1 TPM= 17.21 Transcript Type= processed_transcript chr16 56625080 56627116 56625080 56627116 + transcript2790.chr16.nnic@MT1E transcript2790.chr16.nnic protein_coding 56625080,56626466,56626880 56625382,56626531,56627116 Gene ID= ENSG00000169715.14 TPM= 4.53 Transcript Type= NA chr16 56625781 56627112 56625781 56627112 + ENST00000568293.1@MT1E ENST00000568293.1 protein_coding 56625781,56626880 56625879,56627112 Gene ID= ENSG00000169715.14 TPM= 5.43 Transcript Type= protein_coding chr16 56638666 56640087 56638666 56640087 + ENST00000290705.12@MT1A ENST00000290705.12 protein_coding 56638666,56639264,56639859 56638766,56639329,56640087 Gene ID= ENSG00000205362.11 TPM= 2.72 Transcript Type= protein_coding chr16 56657694 56659303 56657694 56659303 + ENST00000334350.6@MT1F ENST00000334350.6 protein_coding 56657694,56658675,56659073 56658086,56658740,56659303 Gene ID= ENSG00000198417.6 TPM= 39.84 Transcript Type= protein_coding chr16 56682424 56684196 56682424 56684196 + ENST00000394485.4@MT1X ENST00000394485.4 protein_coding 56682424,56683165,56683958 56682568,56683230,56684196 Gene ID= ENSG00000187193.8 TPM= 34.41 Transcript Type= protein_coding chr16 56730105 56844769 56730105 56844769 + ENST00000308159.9@NUP93 ENST00000308159.9 protein_coding 56730105,56748234,56758538,56798476,56805504,56818664,56821504,56823707,56828977,56830528,56831842,56832295,56833215,56834128,56834370,56834734,56836601,56837608,56838952,56839521,56841705,56844499 56730211,56748426,56758655,56798538,56805632,56818738,56821593,56823846,56829109,56830685,56832007,56832388,56833406,56834254,56834442,56834778,56836717,56837726,56839069,56839604,56841833,56844769 Gene ID= ENSG00000102900.12 TPM= 94.18 Transcript Type= protein_coding chr16 56932147 56943881 56932147 56943881 + ENST00000300302.9@HERPUD1 ENST00000300302.9 protein_coding 56932147,56935235,56935404,56936687,56939237,56939895,56942132,56943126 56932391,56935312,56935475,56936817,56939359,56940245,56942237,56943881 Gene ID= ENSG00000051108.14 TPM= 20.22 Transcript Type= protein_coding chr16 56932160 56943886 56932160 56943886 + ENST00000379792.6@HERPUD1 ENST00000379792.6 protein_coding 56932160,56935235,56936687,56939237,56939895,56942132,56943126 56932391,56935312,56936817,56939359,56940245,56942237,56943886 Gene ID= ENSG00000051108.14 TPM= 3.02 Transcript Type= protein_coding chr16 56961850 56983845 56961850 56983845 + ENST00000200676.7@CETP ENST00000200676.7 protein_coding 56961850,56963010,56969386,56969611,56969914,56971033,56971321,56971992,56973331,56975101,56978091,56981158,56981647,56982165,56983326,56983592 56962097,56963124,56969520,56969681,56970001,56971102,56971381,56972083,56973510,56975151,56978255,56981225,56981680,56982237,56983411,56983845 Gene ID= ENSG00000087237.10 TPM= 11.77 Transcript Type= protein_coding chr16 56989498 57083524 56989498 57083524 + ENST00000262510.10@NLRC5 ENST00000262510.10 protein_coding 56989498,57017074,57020701,57022256,57023785,57025368,57028072,57028302,57029773,57029995,57031404,57033604,57034168,57036100,57037195,57039781,57040650,57041485,57041982,57043515,57045448,57046552,57047545,57051538,57054751,57055032,57055433,57058065,57058972,57059467,57061448,57061618,57065212,57066534,57067387,57067736,57069836,57070535,57074600,57076819,57077296,57077719,57077943,57079050,57079221,57079546,57081098,57081527,57082417 56989595,57017188,57021007,57022315,57023853,57027018,57028155,57028385,57029856,57030084,57031463,57033669,57034251,57036183,57037284,57039849,57040718,57041574,57042065,57043604,57045492,57046641,57047628,57051621,57054840,57055094,57055519,57058148,57059061,57059532,57061531,57061701,57065298,57066614,57067470,57067828,57069919,57070618,57074683,57076902,57077379,57077802,57078020,57079133,57079292,57079629,57081181,57081610,57083524 Gene ID= ENSG00000140853.15 TPM= 6.34 Transcript Type= protein_coding chr16 57092537 57148367 57092537 57148367 + ENST00000290776.12@CPNE2 ENST00000290776.12 protein_coding 57092537,57110708,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57134775,57137149,57146085,57147551 57092790,57110922,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57134826,57137282,57146321,57148367 Gene ID= ENSG00000140848.16 TPM= 36.67 Transcript Type= protein_coding chr16 57092602 57147964 57092602 57147964 + transcript2841.chr16.nnic@CPNE2 transcript2841.chr16.nnic protein_coding 57092602,57110708,57113288,57115476,57117496,57119195,57121093,57121674,57123414,57125860,57127849,57134775,57137149,57146085,57147551 57092790,57110922,57113467,57115550,57117567,57119278,57121191,57121760,57123473,57125993,57127903,57134826,57137282,57146321,57147964 Gene ID= ENSG00000140848.16 TPM= 3.17 Transcript Type= NA chr16 57092545 57147964 57092545 57147964 + transcript2842.chr16.nic@CPNE2 transcript2842.chr16.nic protein_coding 57092545,57110708,57113288,57115476,57117496,57119195,57119561,57121093,57121674,57123414,57125860,57127849,57146085,57147551 57092790,57110922,57113467,57115550,57117567,57119278,57119650,57121191,57121760,57123473,57125993,57127903,57146321,57147964 Gene ID= ENSG00000140848.16 TPM= 1.81 Transcript Type= NA chr16 57152467 57186038 57152467 57186038 - transcript2844.chr16.nic@FAM192A transcript2844.chr16.nic protein_coding 57185821,57174169,57173728,57172776,57172251,57167093,57164001,57152467 57186038,57174286,57173869,57172874,57172372,57167226,57164065,57154507 Gene ID= ENSG00000172775.16 TPM= 4.07 Transcript Type= NA chr16 57152467 57185805 57152467 57185805 - transcript2848.chr16.nic@FAM192A transcript2848.chr16.nic protein_coding 57185545,57173728,57172776,57172251,57167093,57164001,57152467 57185805,57173869,57172874,57172372,57167226,57164065,57154507 Gene ID= ENSG00000172775.16 TPM= 4.07 Transcript Type= NA chr16 57152466 57186064 57152466 57186064 - ENST00000309137.12@FAM192A ENST00000309137.12 protein_coding 57185821,57173728,57172776,57172251,57167093,57164001,57152466 57186064,57173869,57172874,57172372,57167226,57164065,57154507 Gene ID= ENSG00000172775.16 TPM= 24 Transcript Type= protein_coding chr16 57152467 57186076 57152467 57186076 - transcript2850.chr16.nic@FAM192A transcript2850.chr16.nic protein_coding 57186031,57173728,57172776,57172251,57167093,57164001,57152467 57186076,57173869,57172874,57172372,57167226,57164065,57154507 Gene ID= ENSG00000172775.16 TPM= 10.41 Transcript Type= NA chr16 57186288 57240471 57186288 57240471 + transcript2854.chr16.nic@RSPRY1 transcript2854.chr16.nic protein_coding 57186288,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879 57186785,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57240471 Gene ID= ENSG00000159579.13 TPM= 9.51 Transcript Type= NA chr16 57186291 57240475 57186291 57240475 + ENST00000394420.8@RSPRY1 ENST00000394420.8 protein_coding 57186291,57204504,57208058,57209075,57212972,57213888,57216107,57216904,57220732,57221272,57227342,57230711,57231167,57235124,57238879 57186451,57205008,57208110,57209187,57213098,57213946,57216173,57217035,57220847,57221415,57227453,57230813,57231319,57235228,57240475 Gene ID= ENSG00000159579.13 TPM= 25.81 Transcript Type= protein_coding chr16 57245151 57253633 57245151 57253633 + transcript2859.chr16.nnic@ARL2BP transcript2859.chr16.nnic protein_coding 57245151,57246080,57248427,57249767,57250411,57252166 57245405,57246141,57248643,57249852,57250507,57253633 Gene ID= ENSG00000102931.7 TPM= 2.26 Transcript Type= NA chr16 57245098 57253635 57245098 57253635 + ENST00000219204.7@ARL2BP ENST00000219204.7 protein_coding 57245098,57246080,57248537,57249767,57250411,57252166 57245405,57246141,57248643,57249852,57250507,57253635 Gene ID= ENSG00000102931.7 TPM= 81.95 Transcript Type= protein_coding chr16 57256097 57284687 57256097 57284687 - ENST00000219207.9@PLLP ENST00000219207.9 protein_coding 57284406,57261897,57258462,57256097 57284687,57262070,57258584,57257029 Gene ID= ENSG00000102934.9 TPM= 9.96 Transcript Type= protein_coding chr16 57372458 57385048 57372458 57385048 + ENST00000006053.6@CX3CL1 ENST00000006053.6 protein_coding 57372458,57379634,57382030 57372638,57379754,57385048 Gene ID= ENSG00000006210.6 TPM= 8.15 Transcript Type= protein_coding chr16 57428169 57447528 57428169 57447528 - ENST00000394391.8@CIAPIN1 ENST00000394391.8 protein_coding 57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428169 57447528,57440983,57439334,57436732,57434212,57432560,57431266,57430339,57429280 Gene ID= ENSG00000005194.14 TPM= 75.77 Transcript Type= protein_coding chr16 57428187 57447419 57428187 57447419 - ENST00000567518.5@CIAPIN1 ENST00000567518.5 protein_coding 57447342,57440772,57439182,57436656,57434044,57432487,57431151,57430258,57428187 57447419,57440983,57439295,57436732,57434212,57432560,57431266,57430339,57429280 Gene ID= ENSG00000005194.14 TPM= 10.57 Transcript Type= protein_coding chr16 57447437 57461275 57447437 57461275 + ENST00000262507.10@COQ9 ENST00000262507.10 protein_coding 57447437,57451040,57452801,57456504,57456931,57458246,57459565,57460051,57460589 57447578,57451208,57452936,57456646,57457015,57458350,57459720,57460104,57461275 Gene ID= ENSG00000088682.13 TPM= 223.52 Transcript Type= protein_coding chr16 57447494 57461242 57447494 57461242 + ENST00000567072.5@COQ9 ENST00000567072.5 protein_coding 57447494,57451040,57452801,57456504,57458246,57459565,57460051,57460589 57447578,57451208,57452936,57456626,57458350,57459720,57460104,57461242 Gene ID= ENSG00000088682.13 TPM= 1.94 Transcript Type= protein_coding chr16 57447432 57472010 57447432 57472010 + transcript2878.chr16.nnic@POLR2C transcript2878.chr16.nnic protein_coding 57447432,57451040,57452801,57456504,57456931,57458246,57459565,57460051,57462560,57463029,57465953,57466175,57469165,57469710,57469961,57470280,57470975 57447578,57451208,57452936,57456646,57457015,57458350,57459720,57460104,57462810,57463078,57466021,57466227,57469293,57469761,57470129,57470354,57472010 Gene ID= ENSG00000102978.12 TPM= 74.25 Transcript Type= NA chr16 57471918 57486545 57471918 57486545 - transcript2893.chr16.nic@DOK4 transcript2893.chr16.nic protein_coding 57486305,57479442,57475850,57475506,57475100,57474793,57473901,57471918 57486545,57479688,57475957,57475620,57475219,57474982,57474039,57473736 Gene ID= ENSG00000125170.10 TPM= 13.58 Transcript Type= NA chr16 57471922 57479805 57471922 57479805 - ENST00000566936.5@DOK4 ENST00000566936.5 protein_coding 57479442,57475850,57475506,57475100,57474793,57473901,57471922 57479805,57475957,57475620,57475219,57474982,57474039,57473736 Gene ID= ENSG00000125170.10 TPM= 4.53 Transcript Type= protein_coding chr16 57471958 57486495 57471958 57486495 - ENST00000340099.8@DOK4 ENST00000340099.8 protein_coding 57486305,57479442,57475850,57475506,57475100,57474793,57473901,57473613,57471958 57486495,57479688,57475957,57475620,57475219,57474982,57474039,57473736,57473495 Gene ID= ENSG00000125170.10 TPM= 39.84 Transcript Type= protein_coding chr16 57512295 57537142 57512295 57537142 - transcript2905.chr16.nnic@CCDC102A transcript2905.chr16.nnic protein_coding 57536960,57528593,57525901,57521068,57518625,57518068,57516293,57515341,57512295 57537142,57529324,57526127,57521176,57518741,57518277,57516463,57515444,57512870 Gene ID= ENSG00000135736.5 TPM= 7.24 Transcript Type= NA chr16 57512178 57536599 57512178 57536599 - ENST00000258214.2@CCDC102A ENST00000258214.2 protein_coding 57536500,57528593,57525901,57521068,57518625,57518068,57516293,57515341,57512178 57536599,57529324,57526127,57521176,57518741,57518277,57516463,57515444,57512870 Gene ID= ENSG00000135736.5 TPM= 42.56 Transcript Type= protein_coding chr16 57628616 57665032 57628616 57665032 + transcript2910.chr16.nic@ADGRG1 transcript2910.chr16.nic protein_coding 57628616,57641591,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659395,57660768,57661697,57663452 57628802,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665032 Gene ID= ENSG00000205336.11 TPM= 13.74 Transcript Type= NA chr16 57628616 57665032 57628616 57665032 + transcript2913.chr16.nic@ADGRG1 transcript2913.chr16.nic protein_coding 57628616,57641591,57650253,57651243,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452 57628802,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665032 Gene ID= ENSG00000205336.11 TPM= 3.78 Transcript Type= NA chr16 57628306 57665028 57628306 57665028 + ENST00000562631.5@ADGRG1 ENST00000562631.5 protein_coding 57628306,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452 57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665028 Gene ID= ENSG00000205336.11 TPM= 13.74 Transcript Type= protein_coding chr16 57628620 57665032 57628620 57665032 + transcript2918.chr16.nic@ADGRG1 transcript2918.chr16.nic protein_coding 57628620,57650253,57651243,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452 57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665032 Gene ID= ENSG00000205336.11 TPM= 3.78 Transcript Type= NA chr16 57628507 57665032 57628507 57665032 + ENST00000456916.5@ADGRG1 ENST00000456916.5 protein_coding 57628507,57650253,57651185,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452 57628802,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665032 Gene ID= ENSG00000205336.11 TPM= 2.87 Transcript Type= protein_coding chr16 57628605 57665025 57628605 57665025 + ENST00000562558.5@ADGRG1 ENST00000562558.5 protein_coding 57628605,57641591,57650253,57651200,57653203,57653986,57655399,57655876,57656226,57656514,57657373,57659413,57660768,57661697,57663452 57628802,57641708,57650351,57651622,57653335,57654133,57655530,57655992,57656271,57656617,57657491,57659681,57660876,57661965,57665025 Gene ID= ENSG00000205336.11 TPM= 20.08 Transcript Type= protein_coding chr16 57735729 57757250 57735729 57757250 + transcript2937.chr16.nic@KATNB1 transcript2937.chr16.nic protein_coding 57735729,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755790,57755992,57756356,57756814 57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250 Gene ID= ENSG00000140854.12 TPM= 9.06 Transcript Type= NA chr16 57735860 57757242 57735860 57757242 + transcript2942.chr16.nic@KATNB1 transcript2942.chr16.nic protein_coding 57735860,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755841,57755992,57756356,57756814 57736116,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757242 Gene ID= ENSG00000140854.12 TPM= 1.81 Transcript Type= NA chr16 57735730 57757250 57735730 57757250 + ENST00000379661.7@KATNB1 ENST00000379661.7 protein_coding 57735730,57736978,57741687,57744394,57750827,57751261,57751641,57751940,57752530,57752778,57753077,57753389,57753945,57754930,57755119,57755345,57755841,57755992,57756356,57756814 57735855,57737283,57741817,57744511,57750927,57751302,57751724,57752055,57752601,57752928,57753267,57753519,57753995,57754997,57755238,57755494,57755917,57756066,57756472,57757250 Gene ID= ENSG00000140854.12 TPM= 64.29 Transcript Type= protein_coding chr16 57758215 57802470 57758215 57802470 - transcript2925.chr16.nnic@KIFC3 transcript2925.chr16.nnic protein_coding 57802370,57798072,57794999,57790930,57788575,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758215 57802470,57798282,57795141,57791066,57788713,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909 Gene ID= ENSG00000140859.15 TPM= 6.65 Transcript Type= NA chr16 57758215 57802615 57758215 57802615 - transcript2927.chr16.nnic@KIFC3 transcript2927.chr16.nnic protein_coding 57802370,57798072,57794999,57788575,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758215 57802615,57798282,57795141,57788713,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909 Gene ID= ENSG00000140859.15 TPM= 41.96 Transcript Type= NA chr16 57758215 57802489 57758215 57802489 - transcript2928.chr16.nnic@KIFC3 transcript2928.chr16.nnic protein_coding 57802370,57798072,57794999,57790930,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758215 57802489,57798282,57795141,57791066,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909 Gene ID= ENSG00000140859.15 TPM= 8.46 Transcript Type= NA chr16 57758215 57802599 57758215 57802599 - transcript2931.chr16.nic@KIFC3 transcript2931.chr16.nic protein_coding 57802370,57798072,57794999,57785464,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758215 57802599,57798282,57795141,57785666,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909 Gene ID= ENSG00000140859.15 TPM= 12.99 Transcript Type= NA chr16 57790771 57802556 57790771 57802556 - transcript2965.chr16.nic@KIFC3 transcript2965.chr16.nic protein_coding 57802370,57798072,57794999,57790771 57802556,57798282,57795141,57791066 Gene ID= ENSG00000140859.15 TPM= 7.24 Transcript Type= NA chr16 57758219 57802513 57758219 57802513 - ENST00000445690.6@KIFC3 ENST00000445690.6 protein_coding 57802370,57798072,57794999,57772223,57771543,57771198,57770527,57769808,57769595,57766874,57765459,57764143,57762140,57761413,57761042,57760726,57760282,57759728,57759125,57758219 57802513,57798282,57795141,57772288,57771686,57771437,57770700,57769955,57769725,57766985,57765640,57764247,57762270,57761536,57761171,57760955,57760416,57759836,57759153,57758909 Gene ID= ENSG00000140859.15 TPM= 65.96 Transcript Type= protein_coding chr16 57994677 58000668 57994677 58000668 - transcript2970.chr16.nnic@ZNF319 transcript2970.chr16.nnic protein_coding 58000401,57999493,57994677 58000668,57999670,57998522 Gene ID= ENSG00000166188.2 TPM= 12.68 Transcript Type= NA chr16 58001373 58021618 58001373 58021618 + ENST00000219281.7@USB1 ENST00000219281.7 protein_coding 58001373,58002479,58009929,58014273,58017334,58018972,58020141 58001581,58002645,58010112,58014326,58017439,58019055,58021618 Gene ID= ENSG00000103005.11 TPM= 128.59 Transcript Type= protein_coding chr16 58001420 58013558 58001420 58013558 + ENST00000563149.1@USB1 ENST00000563149.1 protein_coding 58001420,58002479,58009929,58012321 58001581,58002645,58010112,58013558 Gene ID= ENSG00000103005.11 TPM= 1.81 Transcript Type= protein_coding chr16 58025566 58046901 58025566 58046901 + ENST00000219271.3@MMP15 ENST00000219271.3 protein_coding 58025566,58037472,58038266,58039875,58040537,58041617,58042231,58043210,58043512,58045007 58026512,58037620,58038394,58040182,58040698,58041870,58042369,58043360,58043627,58046901 Gene ID= ENSG00000102996.4 TPM= 7.24 Transcript Type= protein_coding chr16 58113595 58129428 58113595 58129428 - transcript2982.chr16.nic@CFAP20 transcript2982.chr16.nic protein_coding 58129032,58116872,58116041,58115269,58114810,58113595 58129428,58116951,58116152,58115457,58115055,58114030 Gene ID= ENSG00000070761.7 TPM= 2.11 Transcript Type= NA chr16 58113588 58129450 58113588 58129450 - ENST00000262498.7@CFAP20 ENST00000262498.7 protein_coding 58129032,58116872,58116041,58115269,58114810,58113588 58129450,58116951,58116152,58115457,58114920,58114030 Gene ID= ENSG00000070761.7 TPM= 29.28 Transcript Type= protein_coding chr16 58113606 58129371 58113606 58129371 - ENST00000562622.5@CFAP20 ENST00000562622.5 protein_coding 58129032,58116872,58116041,58114810,58113606 58129371,58116951,58116152,58115457,58114030 Gene ID= ENSG00000070761.7 TPM= 1.2 Transcript Type= retained_intron chr16 58159561 58198185 58159561 58198185 - transcript2986.chr16.nic@CSNK2A2 transcript2986.chr16.nic protein_coding 58197633,58196733,58186755,58184260,58174451,58168610,58167685,58167207,58166584,58165560,58159561 58198185,58196844,58186856,58184310,58174510,58168693,58167795,58167308,58166684,58165708,58164147 Gene ID= ENSG00000070770.8 TPM= 38.03 Transcript Type= NA chr16 58249936 58283836 58249936 58283836 + ENST00000219299.8@CCDC113 ENST00000219299.8 protein_coding 58249936,58252727,58253998,58258368,58259854,58262385,58267479,58278482,58279691 58250115,58252853,58254159,58258523,58259934,58262540,58267586,58278637,58283836 Gene ID= ENSG00000103021.9 TPM= 5.43 Transcript Type= protein_coding chr16 58392394 58406144 58392394 58406144 + ENST00000318129.5@GINS3 ENST00000318129.5 protein_coding 58392394,58403098,58404499 58392787,58403331,58406144 Gene ID= ENSG00000181938.13 TPM= 5.43 Transcript Type= protein_coding chr16 58392394 58406036 58392394 58406036 + ENST00000328514.11@GINS3 ENST00000328514.11 protein_coding 58392394,58404499 58392787,58406036 Gene ID= ENSG00000181938.13 TPM= 1.81 Transcript Type= protein_coding chr16 58463538 58513633 58463538 58513633 + transcript3004.chr16.nic@NDRG4 transcript3004.chr16.nic protein_coding 58463538,58487756,58494964,58500988,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422 58463797,58487850,58495008,58501077,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513633 Gene ID= ENSG00000103034.14 TPM= 33.58 Transcript Type= NA chr16 58464024 58513619 58464024 58513619 + ENST00000394282.8@NDRG4 ENST00000394282.8 protein_coding 58464024,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422 58464467,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513619 Gene ID= ENSG00000103034.14 TPM= 263.19 Transcript Type= protein_coding chr16 58463665 58513628 58463665 58513628 + ENST00000258187.9@NDRG4 ENST00000258187.9 protein_coding 58463665,58487756,58494964,58503798,58504154,58504359,58504589,58506387,58506558,58506912,58507808,58507948,58508962,58509154,58509301,58511422 58463797,58487850,58495008,58503903,58504274,58504421,58504649,58506473,58506614,58507015,58507864,58507999,58509009,58509189,58509352,58513628 Gene ID= ENSG00000103034.14 TPM= 511.31 Transcript Type= protein_coding chr16 58515488 58519110 58515488 58519110 + ENST00000219315.8@SETD6 ENST00000219315.8 protein_coding 58515488,58515791,58516202,58516478,58516808,58518051,58518401,58518724 58515564,58516097,58516343,58516672,58516928,58518231,58518543,58519110 Gene ID= ENSG00000103037.11 TPM= 1.81 Transcript Type= protein_coding chr16 58519951 58629886 58519951 58629886 - ENST00000317147.9@CNOT1 ENST00000317147.9 protein_coding 58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58519951 58629886,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036 Gene ID= ENSG00000125107.17 TPM= 10.87 Transcript Type= protein_coding chr16 58520695 58629834 58520695 58629834 - ENST00000569240.5@CNOT1 ENST00000569240.5 protein_coding 58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556862,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543607,58542428,58542231,58541501,58539768,58538772,58538158,58537891,58536989,58534147,58532232,58531958,58530246,58528475,58525989,58525179,58523370,58521183,58520695 58629834,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903,58542568,58542335,58541620,58539959,58538914,58538266,58538060,58537220,58534395,58532395,58532075,58530347,58528648,58526138,58525359,58523502,58521317,58521036 Gene ID= ENSG00000125107.17 TPM= 2.72 Transcript Type= protein_coding chr16 58543327 58629838 58543327 58629838 - ENST00000441024.6@CNOT1 ENST00000441024.6 protein_coding 58629728,58599236,58588799,58587780,58587345,58587201,58586545,58585338,58583056,58582793,58581345,58580633,58578699,58576463,58575007,58574609,58560212,58558473,58556847,58555784,58555251,58553782,58551589,58551132,58549719,58547566,58547186,58546672,58546321,58545361,58543327 58629838,58599511,58588906,58587878,58587413,58587255,58586748,58585506,58583182,58582903,58581515,58580760,58578939,58576582,58575129,58574760,58560362,58558674,58556993,58555908,58555537,58553860,58551819,58551272,58549898,58547682,58547296,58546749,58546498,58545491,58543903 Gene ID= ENSG00000125107.17 TPM= 1.81 Transcript Type= protein_coding chr16 58665109 58685104 58665109 58685104 - ENST00000219320.8@SLC38A7 ENST00000219320.8 protein_coding 58684717,58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109 58685104,58684178,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487 Gene ID= ENSG00000103042.8 TPM= 25.81 Transcript Type= protein_coding chr16 58665109 58684723 58665109 58684723 - ENST00000570101.5@SLC38A7 ENST00000570101.5 protein_coding 58683955,58679857,58678696,58678333,58677326,58676289,58675940,58672096,58671045,58670113,58665109 58684723,58680241,58678894,58678474,58677424,58676346,58676054,58672243,58671244,58670167,58667487 Gene ID= ENSG00000103042.8 TPM= 9.51 Transcript Type= protein_coding chr16 58707131 58734357 58707131 58734357 - ENST00000245206.9@GOT2 ENST00000245206.9 protein_coding 58734140,58723746,58722150,58719196,58718527,58718196,58716663,58716014,58709417,58707131 58734357,58723902,58722278,58719255,58718688,58718300,58716813,58716179,58709567,58708293 Gene ID= ENSG00000125166.12 TPM= 291.59 Transcript Type= protein_coding chr16 64943753 65122198 64943753 65122198 - ENST00000268603.8@CDH11 ENST00000268603.8 protein_coding 65121880,65053804,65004642,64998562,64992915,64991768,64988157,64982048,64972904,64971931,64971579,64950767,64943753 65122198,65053928,65005041,64998856,64993034,64991935,64988344,64982301,64973040,64972064,64971696,64951018,64948099 Gene ID= ENSG00000140937.13 TPM= 12.68 Transcript Type= protein_coding chr16 66366583 66404783 66366583 66404783 + transcript3100.chr16.nnic@CDH5 transcript3100.chr16.nnic protein_coding 66366583,66368643,66379319,66386809,66388324,66389358,66390403,66392136,66396059,66397982,66398456,66400771,66402652 66366758,66368752,66379547,66387097,66388440,66389522,66390590,66392383,66396201,66398106,66398561,66401016,66404783 Gene ID= ENSG00000179776.17 TPM= 6.34 Transcript Type= NA chr16 66366630 66404786 66366630 66404786 + ENST00000341529.7@CDH5 ENST00000341529.7 protein_coding 66366630,66379319,66386809,66388324,66389358,66390403,66392136,66396059,66397982,66398456,66400771,66402652 66366758,66379547,66387097,66388440,66389522,66390590,66392383,66396201,66398106,66398561,66401016,66404786 Gene ID= ENSG00000179776.17 TPM= 58.86 Transcript Type= protein_coding chr16 66508003 66550412 66508003 66550412 - ENST00000299697.11@TK2 ENST00000299697.11 protein_coding 66549938,66548978,66541879,66536964,66531380,66528994,66517789,66517136,66513731,66508003 66550412,66549009,66541953,66537017,66531469,66529067,66517877,66517215,66513811,66512066 Gene ID= ENSG00000166548.15 TPM= 62.78 Transcript Type= protein_coding chr16 66508003 66550412 66508003 66550412 - ENST00000620035.4@TK2 ENST00000620035.4 protein_coding 66549938,66548978,66541879,66531380,66528994,66517789,66517136,66513731,66508003 66550412,66549009,66541953,66531469,66529067,66517877,66517215,66513811,66512066 Gene ID= ENSG00000166548.15 TPM= 5.73 Transcript Type= protein_coding chr16 66509386 66550124 66509386 66550124 - transcript3111.chr16.nnic@TK2 transcript3111.chr16.nnic protein_coding 66549938,66548978,66541879,66536964,66531380,66528994,66517789,66517193,66509386 66550124,66549009,66541953,66537017,66531469,66529067,66517877,66517215,66510180 Gene ID= ENSG00000166548.15 TPM= 29.88 Transcript Type= NA chr16 66510744 66549798 66510744 66549798 - ENST00000527800.5@TK2 ENST00000527800.5 protein_coding 66548978,66541879,66536964,66531380,66528994,66517789,66517136,66513731,66510744 66549798,66541953,66537017,66531469,66529067,66517877,66517215,66513811,66512066 Gene ID= ENSG00000166548.15 TPM= 1.2 Transcript Type= protein_coding chr16 66552569 66566072 66552569 66566072 + ENST00000351137.8@CKLF ENST00000351137.8 protein_coding 66552569,66563122,66565886 66552793,66563217,66566072 Gene ID= ENSG00000217555.12 TPM= 9.06 Transcript Type= protein_coding chr16 66552567 66566072 66552567 66566072 + ENST00000264001.8@CKLF ENST00000264001.8 protein_coding 66552567,66558190,66563122,66565886 66552793,66558348,66563217,66566072 Gene ID= ENSG00000217555.12 TPM= 6.34 Transcript Type= protein_coding chr16 66603998 66613890 66603998 66613890 + transcript3117.chr16.nic@CMTM3 transcript3117.chr16.nic protein_coding 66603998,66604731,66608309,66609435,66609883,66612609 66604449,66604952,66608464,66609530,66610003,66613890 Gene ID= ENSG00000140931.19 TPM= 13.36 Transcript Type= NA chr16 66604276 66613892 66604276 66613892 + ENST00000361909.8@CMTM3 ENST00000361909.8 protein_coding 66604276,66604731,66608309,66609435,66609883,66612609 66604555,66604952,66608464,66609530,66610003,66613892 Gene ID= ENSG00000140931.19 TPM= 14.26 Transcript Type= protein_coding chr16 66604032 66613892 66604032 66613892 + ENST00000424011.6@CMTM3 ENST00000424011.6 protein_coding 66604032,66604731,66608309,66609435,66609883,66612609 66604482,66604952,66608464,66609530,66610003,66613892 Gene ID= ENSG00000140931.19 TPM= 12.45 Transcript Type= protein_coding chr16 66604664 66613880 66604664 66613880 + ENST00000567572.5@CMTM3 ENST00000567572.5 protein_coding 66604664,66608309,66609435,66609883,66612609 66604952,66608464,66609530,66610003,66613880 Gene ID= ENSG00000140931.19 TPM= 35.09 Transcript Type= protein_coding chr16 66720893 66751798 66720893 66751798 - ENST00000258198.6@DYNC1LI2 ENST00000258198.6 protein_coding 66751485,66751273,66749197,66742438,66736075,66734218,66732339,66730112,66729040,66728201,66727688,66725828,66720893 66751798,66751346,66749313,66742668,66736244,66734311,66732474,66730223,66729099,66728242,66727805,66725944,66723822 Gene ID= ENSG00000135720.12 TPM= 67.92 Transcript Type= protein_coding chr16 66802880 66830976 66802880 66830976 - ENST00000379463.6@NAE1 ENST00000379463.6 protein_coding 66830847,66827980,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802880 66830976,66828077,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118 Gene ID= ENSG00000159593.14 TPM= 3.17 Transcript Type= protein_coding chr16 66802875 66830997 66802875 66830997 - ENST00000290810.7@NAE1 ENST00000290810.7 protein_coding 66830847,66826677,66826523,66824855,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802875 66830997,66826780,66826583,66824885,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118 Gene ID= ENSG00000159593.14 TPM= 55.69 Transcript Type= protein_coding chr16 66802878 66830994 66802878 66830994 - transcript3131.chr16.nic@NAE1 transcript3131.chr16.nic protein_coding 66830847,66826677,66826523,66823529,66823227,66821450,66818528,66817425,66816965,66816581,66813787,66813564,66810697,66810374,66808989,66808521,66805912,66805777,66802878 66830994,66826780,66826583,66823600,66823306,66821559,66818637,66817487,66817028,66816672,66813846,66813697,66810772,66810413,66809075,66808613,66806026,66805826,66803118 Gene ID= ENSG00000159593.14 TPM= 1.81 Transcript Type= NA chr16 66841434 66873285 66841434 66873285 - transcript3136.chr16.nnic@AC044802.2 transcript3136.chr16.nnic antisense_RNA 66873115,66853405,66841434 66873285,66853685,66841822 Gene ID= ENSG00000258122.1 TPM= 1.81 Transcript Type= NA chr16 66880361 66891096 66880361 66891096 + ENST00000311765.3@PDP2 ENST00000311765.3 protein_coding 66880361,66884231 66880640,66891096 Gene ID= ENSG00000172840.6 TPM= 4.53 Transcript Type= protein_coding chr16 66921685 66925644 66921685 66925644 - ENST00000299759.10@RRAD ENST00000299759.10 protein_coding 66925409,66924810,66923846,66923516,66921685 66925644,66925194,66923919,66923720,66922353 Gene ID= ENSG00000166592.11 TPM= 27.17 Transcript Type= protein_coding chr16 66932055 66934400 66932055 66934400 - ENST00000422424.6@FAM96B ENST00000422424.6 protein_coding 66934223,66933987,66933614,66932780,66932055 66934400,66934066,66933739,66932825,66932300 Gene ID= ENSG00000166595.11 TPM= 139.45 Transcript Type= protein_coding chr16 66934460 66945096 66934460 66945096 + ENST00000317091.8@CES2 ENST00000317091.8 protein_coding 66934460,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839 66935711,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66945096 Gene ID= ENSG00000172831.11 TPM= 211.44 Transcript Type= protein_coding chr16 66934444 66945069 66934444 66945069 + ENST00000417689.5@CES2 ENST00000417689.5 protein_coding 66934444,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839 66935711,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942737,66943371,66945069 Gene ID= ENSG00000172831.11 TPM= 14.49 Transcript Type= protein_coding chr16 66934471 66944306 66934471 66944306 + ENST00000568470.5@CES2 ENST00000568470.5 protein_coding 66934471,66938037,66939217,66940222,66940437,66941124,66941506,66941768,66942105,66942648,66943299,66943839 66935976,66938241,66939358,66940355,66940695,66941222,66941646,66941848,66942249,66942785,66943371,66944306 Gene ID= ENSG00000172831.11 TPM= 13.13 Transcript Type= nonsense_mediated_decay chr16 67000517 67009754 67000517 67009754 + transcript3153.chr16.nic@CES4A transcript3153.chr16.nic protein_coding 67000517,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67006391,67006745,67008974 67000779,67000990,67001461,67003174,67003360,67003553,67004224,67005393,67006519,67006817,67009754 Gene ID= ENSG00000172824.14 TPM= 2.72 Transcript Type= NA chr16 67000517 67009754 67000517 67009754 + transcript3154.chr16.nic@CES4A transcript3154.chr16.nic protein_coding 67000517,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67005240,67008974 67000779,67000990,67001461,67003174,67003360,67003553,67004224,67004873,67005393,67009754 Gene ID= ENSG00000172824.14 TPM= 2.72 Transcript Type= NA chr16 67000517 67009754 67000517 67009754 + transcript3159.chr16.nic@CES4A transcript3159.chr16.nic protein_coding 67000517,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67008974 67000779,67000990,67001461,67003174,67003360,67003553,67004224,67005393,67009754 Gene ID= ENSG00000172824.14 TPM= 3.62 Transcript Type= NA chr16 67000517 67009754 67000517 67009754 + transcript3161.chr16.nic@CES4A transcript3161.chr16.nic protein_coding 67000517,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67008974 67000779,67000990,67001461,67003174,67003360,67003553,67004224,67006817,67009754 Gene ID= ENSG00000172824.14 TPM= 5.43 Transcript Type= NA chr16 67000517 67009754 67000517 67009754 + transcript3163.chr16.nic@CES4A transcript3163.chr16.nic protein_coding 67000517,67000857,67001308,67003070,67003256,67003515,67004084,67004793,67008974 67000779,67001046,67001461,67003174,67003360,67003553,67004224,67006817,67009754 Gene ID= ENSG00000172824.14 TPM= 2.72 Transcript Type= NA chr16 67001212 67009754 67001212 67009754 + transcript3166.chr16.nic@CES4A transcript3166.chr16.nic protein_coding 67001212,67003070,67003256,67003515,67004084,67004793,67008974 67001461,67003174,67003360,67003553,67004224,67005393,67009754 Gene ID= ENSG00000172824.14 TPM= 1.81 Transcript Type= NA chr16 67029147 67101058 67029147 67101058 + ENST00000290858.10@CBFB ENST00000290858.10 protein_coding 67029147,67029727,67036639,67066682,67082213,67098710 67029485,67029813,67036755,67066798,67082339,67101058 Gene ID= ENSG00000067955.13 TPM= 34.41 Transcript Type= protein_coding chr16 67109924 67148542 67109924 67148542 + transcript3173.chr16.nic@C16orf70 transcript3173.chr16.nic protein_coding 67109924,67110145,67120112,67125959,67131286,67132446,67132817,67134168,67134355,67139984,67140511,67144294,67144834,67145376,67145570,67146278,67147045 67109989,67110239,67120194,67126042,67131329,67132525,67132911,67134265,67134467,67140117,67140594,67144376,67144877,67145419,67145628,67146350,67148542 Gene ID= ENSG00000125149.11 TPM= 3.17 Transcript Type= NA chr16 67141617 67148542 67141617 67148542 + transcript3177.chr16.nic@C16orf70 transcript3177.chr16.nic protein_coding 67141617,67144834,67145376,67145570,67146278,67147045 67144376,67144877,67145419,67145628,67146350,67148542 Gene ID= ENSG00000125149.11 TPM= 2.26 Transcript Type= NA chr16 67148105 67151214 67148105 67151214 - ENST00000449549.3@B3GNT9 ENST00000449549.3 protein_coding 67150865,67148105 67151214,67150671 Gene ID= ENSG00000237172.3 TPM= 30.79 Transcript Type= protein_coding chr16 67153969 67161737 67153969 67161737 - transcript3230.chr16.nnic@TRADD transcript3230.chr16.nnic protein_coding 67161542,67156510,67155377,67155096,67153969 67161737,67156668,67155654,67155294,67154959 Gene ID= ENSG00000102871.15 TPM= 8.6 Transcript Type= NA chr16 67154188 67161002 67154188 67161002 - transcript3233.chr16.nic@TRADD transcript3233.chr16.nic protein_coding 67159838,67156510,67155377,67155096,67154188 67161002,67156668,67156199,67155294,67154959 Gene ID= ENSG00000102871.15 TPM= 3.17 Transcript Type= NA chr16 67159931 67164176 67159931 67164176 + ENST00000258200.7@FBXL8 ENST00000258200.7 protein_coding 67159931,67161735,67162848 67160056,67161937,67164176 Gene ID= ENSG00000135722.8 TPM= 20.83 Transcript Type= protein_coding chr16 67159961 67164174 67159961 67164174 + ENST00000519917.5@FBXL8 ENST00000519917.5 protein_coding 67159961,67161735,67162848,67164019 67160056,67161937,67163852,67164174 Gene ID= ENSG00000135722.8 TPM= 6.34 Transcript Type= protein_coding chr16 67159936 67169947 67159936 67169947 + transcript3184.chr16.nic@HSF4 transcript3184.chr16.nic protein_coding 67159936,67161735,67162848,67164019,67164441,67165719,67165946,67166558,67167120,67167303,67167475,67167824,67168831,67169036,67169279,67169631 67160056,67161937,67163852,67164144,67165630,67165846,67166395,67166622,67167222,67167402,67167599,67167947,67168936,67169101,67169348,67169947 Gene ID= ENSG00000102878.16 TPM= 9.06 Transcript Type= NA chr16 67159936 67169947 67159936 67169947 + transcript3190.chr16.nic@HSF4 transcript3190.chr16.nic protein_coding 67159936,67161735,67162848,67164019,67164441,67165719,67165946,67166558,67167120,67167475,67167824,67168831,67169036,67169279,67169631 67160056,67161937,67163852,67164144,67165630,67165846,67166395,67166622,67167222,67167599,67167947,67168936,67169101,67169348,67169947 Gene ID= ENSG00000102878.16 TPM= 8.15 Transcript Type= NA chr16 67170521 67176159 67170521 67176159 + transcript3234.chr16.nnic@NOL3 transcript3234.chr16.nnic protein_coding 67170521,67174008,67174162,67174621,67175047 67170574,67174046,67174464,67174944,67176159 Gene ID= ENSG00000140939.14 TPM= 7.47 Transcript Type= NA chr16 67172217 67176255 67172217 67176255 + transcript3241.chr16.nic@NOL3 transcript3241.chr16.nic protein_coding 67172217,67174162,67174621,67175047 67174046,67174464,67174944,67176255 Gene ID= ENSG00000140939.14 TPM= 80.21 Transcript Type= NA chr16 67170497 67175735 67170497 67175735 + ENST00000268605.11@NOL3 ENST00000268605.11 protein_coding 67170497,67174162,67174621,67175047 67170574,67174464,67174944,67175735 Gene ID= ENSG00000140939.14 TPM= 12.9 Transcript Type= protein_coding chr16 67174002 67175735 67174002 67175735 + ENST00000568146.1@NOL3 ENST00000568146.1 protein_coding 67174002,67174162,67174621,67175047 67174046,67174454,67174944,67175735 Gene ID= ENSG00000140939.14 TPM= 35.24 Transcript Type= protein_coding chr16 67175600 67184196 67175600 67184196 - transcript3213.chr16.nic@KIAA0895L transcript3213.chr16.nic protein_coding 67183262,67181558,67180041,67179815,67179430,67178199,67178010,67175600 67184196,67181697,67180666,67179958,67179562,67178504,67178107,67176975 Gene ID= ENSG00000196123.12 TPM= 8.51 Transcript Type= NA chr16 67175600 67183995 67175600 67183995 - transcript3220.chr16.nic@KIAA0895L transcript3220.chr16.nic protein_coding 67183262,67181558,67180041,67179815,67178199,67178010,67175600 67183995,67181697,67180666,67179958,67179562,67178107,67176975 Gene ID= ENSG00000196123.12 TPM= 10.93 Transcript Type= NA chr16 67175600 67183995 67175600 67183995 - transcript3221.chr16.nic@KIAA0895L transcript3221.chr16.nic protein_coding 67183262,67181606,67180041,67179815,67178199,67178010,67175600 67183995,67181697,67180666,67179958,67179562,67178107,67176975 Gene ID= ENSG00000196123.12 TPM= 7.31 Transcript Type= NA chr16 67175600 67183753 67175600 67183753 - transcript3225.chr16.nic@KIAA0895L transcript3225.chr16.nic protein_coding 67183262,67180041,67179815,67178199,67178010,67175600 67183753,67180666,67179958,67179562,67178107,67176975 Gene ID= ENSG00000196123.12 TPM= 7.08 Transcript Type= NA chr16 67175604 67183952 67175604 67183952 - ENST00000561621.5@KIAA0895L ENST00000561621.5 protein_coding 67183262,67181558,67180041,67179815,67179430,67178199,67178010,67175604 67183952,67181697,67180666,67179958,67179562,67178504,67178097,67176975 Gene ID= ENSG00000196123.12 TPM= 6.02 Transcript Type= protein_coding chr16 67184366 67190204 67184366 67190204 - ENST00000314586.10@EXOC3L1 ENST00000314586.10 protein_coding 67189971,67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184902,67184686,67184366 67190204,67189683,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184810,67184604 Gene ID= ENSG00000179044.15 TPM= 4.53 Transcript Type= protein_coding chr16 67184380 67190204 67184380 67190204 - transcript3204.chr16.nic@EXOC3L1 transcript3204.chr16.nic protein_coding 67189971,67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184686,67184380 67190204,67189683,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184604 Gene ID= ENSG00000179044.15 TPM= 4.07 Transcript Type= NA chr16 67184380 67190140 67184380 67190140 - transcript3207.chr16.nic@EXOC3L1 transcript3207.chr16.nic protein_coding 67189631,67189020,67188721,67187225,67187021,67186759,67186557,67186237,67185361,67185136,67184686,67184380 67190140,67189180,67188940,67187837,67187138,67186884,67186657,67186347,67185490,67185258,67185057,67184604 Gene ID= ENSG00000179044.15 TPM= 3.17 Transcript Type= NA chr16 67192125 67198923 67192125 67198923 + transcript3265.chr16.nic@E2F4 transcript3265.chr16.nic protein_coding 67192125,67192761,67193472,67194398,67194686,67195782,67197599,67197867,67198008 67192362,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198923 Gene ID= ENSG00000205250.8 TPM= 18.11 Transcript Type= NA chr16 67192169 67198918 67192169 67198918 + ENST00000379378.7@E2F4 ENST00000379378.7 protein_coding 67192169,67192761,67193009,67193472,67194398,67194686,67195782,67197599,67197867,67198008 67192362,67192870,67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198918 Gene ID= ENSG00000205250.8 TPM= 108.67 Transcript Type= protein_coding chr16 67192185 67198917 67192185 67198917 + ENST00000567007.5@E2F4 ENST00000567007.5 protein_coding 67192185,67193472,67194398,67194686,67195782,67197599,67197867,67198008 67193170,67193515,67194459,67194980,67196006,67197646,67197911,67198917 Gene ID= ENSG00000205250.8 TPM= 6.34 Transcript Type= retained_intron chr16 67199111 67204029 67199111 67204029 + ENST00000393997.6@ELMO3 ENST00000393997.6 protein_coding 67199111,67199553,67199684,67199951,67200192,67200451,67200657,67200890,67201385,67201520,67201742,67201977,67202176,67202397,67202627,67202892,67203119,67203327,67203497,67203665 67199404,67199593,67199756,67200001,67200361,67200550,67200808,67200968,67201435,67201642,67201873,67202078,67202284,67202533,67202790,67203004,67203223,67203409,67203583,67204029 Gene ID= ENSG00000102890.14 TPM= 2.26 Transcript Type= protein_coding chr16 67199509 67204029 67199509 67204029 + ENST00000477898.5@ELMO3 ENST00000477898.5 protein_coding 67199509,67199684,67199951,67200192,67200451,67200657,67200890,67201385,67201520,67201742,67201977,67202176,67202397,67202627,67202892,67203119,67203327,67203497,67203665 67199593,67199756,67200001,67200361,67200550,67200808,67200968,67201435,67201642,67201873,67202078,67202284,67202533,67202790,67203004,67203223,67203409,67203583,67204029 Gene ID= ENSG00000102890.14 TPM= 1.36 Transcript Type= protein_coding chr16 67205175 67226848 67205175 67226848 - transcript3272.chr16.nic@LRRC29 transcript3272.chr16.nic protein_coding 67226630,67223826,67210048,67208312,67207873,67205175 67226848,67223927,67210322,67208455,67208090,67207773 Gene ID= ENSG00000125122.15 TPM= 2.72 Transcript Type= NA chr16 67207140 67226998 67207140 67226998 - ENST00000629962.2@LRRC29 ENST00000629962.2 protein_coding 67226975,67223826,67210048,67208312,67207873,67207599,67207140 67226998,67223927,67210322,67208455,67208090,67207773,67207504 Gene ID= ENSG00000125122.15 TPM= 2.72 Transcript Type= protein_coding chr16 67227113 67229278 67227113 67229278 + ENST00000304800.13@TMEM208 ENST00000304800.13 protein_coding 67227113,67227836,67228355,67228495,67228797,67228976 67227224,67227931,67228414,67228631,67228881,67229278 Gene ID= ENSG00000168701.18 TPM= 73.35 Transcript Type= protein_coding chr16 67227157 67229278 67227157 67229278 + ENST00000562235.5@TMEM208 ENST00000562235.5 protein_coding 67227157,67227836,67228355,67228495,67228797,67228976 67227224,67227931,67228414,67228657,67228881,67229278 Gene ID= ENSG00000168701.18 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr16 67229390 67247516 67229390 67247516 - transcript3281.chr16.nic@FHOD1 transcript3281.chr16.nic protein_coding 67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67236411,67234357,67233657,67232039,67231637,67231430,67231188,67230601,67230314,67230066,67229793,67229390 67247516,67239454,67238967,67238447,67238270,67238128,67237768,67237569,67237382,67237114,67236733,67236434,67234472,67234267,67232194,67231819,67231549,67231349,67230791,67230506,67230228,67229990,67229718 Gene ID= ENSG00000135723.13 TPM= 3.24 Transcript Type= NA chr16 67229390 67247516 67229390 67247516 - transcript3283.chr16.nic@FHOD1 transcript3283.chr16.nic protein_coding 67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67236411,67234357,67233657,67232039,67231637,67231430,67231188,67230601,67230314,67230066,67229793,67229390 67247516,67239454,67238967,67238447,67238307,67238128,67237768,67237569,67237382,67237114,67236733,67236434,67234472,67234267,67232194,67231819,67231549,67231349,67230791,67230506,67230228,67229990,67229718 Gene ID= ENSG00000135723.13 TPM= 3.24 Transcript Type= NA chr16 67229389 67247658 67229389 67247658 - ENST00000258201.8@FHOD1 ENST00000258201.8 protein_coding 67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67234357,67233657,67232039,67231637,67231430,67231188,67230601,67230314,67230066,67229793,67229389 67247658,67239454,67238967,67238447,67238307,67238128,67237768,67237569,67237382,67237114,67236733,67234472,67234267,67232194,67231819,67231549,67231349,67230791,67230506,67230228,67229990,67229718 Gene ID= ENSG00000135723.13 TPM= 31.31 Transcript Type= protein_coding chr16 67229390 67247516 67229390 67247516 - transcript3289.chr16.nnic@FHOD1 transcript3289.chr16.nnic protein_coding 67247210,67239348,67238903,67238380,67238202,67238034,67237657,67237475,67237239,67236966,67236557,67234357,67233657,67232039,67231637,67231430,67231296,67230601,67230314,67230066,67229793,67229390 67247516,67239454,67238967,67238447,67238307,67238128,67237768,67237569,67237382,67237114,67236733,67234472,67234267,67232194,67231819,67231549,67231349,67230791,67230506,67230228,67229990,67229718 Gene ID= ENSG00000135723.13 TPM= 2.04 Transcript Type= NA chr16 67278151 67289499 67278151 67289499 + transcript3297.chr16.nic@PLEKHG4 transcript3297.chr16.nic protein_coding 67278151,67278741,67279876,67280711,67280882,67281091,67281567,67281724,67282009,67282201,67282503,67282742,67284275,67284713,67285290,67286274,67286445,67286749,67287000,67287898,67288167,67288489,67288803 67278276,67278790,67280543,67280806,67281005,67281184,67281644,67281837,67282107,67282349,67282641,67282858,67284457,67285215,67285536,67286363,67286666,67286919,67287177,67288014,67288400,67288604,67289499 Gene ID= ENSG00000196155.12 TPM= 8.76 Transcript Type= NA chr16 67278151 67289499 67278151 67289499 + transcript3300.chr16.nic@PLEKHG4 transcript3300.chr16.nic protein_coding 67278151,67278741,67279876,67280882,67281091,67281567,67281724,67282009,67282201,67282503,67282742,67284275,67284713,67285290,67286274,67286445,67286749,67287000,67287898,67288167,67288489,67288803 67278276,67278790,67280806,67281005,67281184,67281644,67281837,67282107,67282349,67282641,67282858,67284457,67285215,67285536,67286363,67286666,67286919,67287177,67288014,67288400,67288604,67289499 Gene ID= ENSG00000196155.12 TPM= 3.32 Transcript Type= NA chr16 67279589 67289499 67279589 67289499 + ENST00000450733.5@PLEKHG4 ENST00000450733.5 protein_coding 67279589,67280882,67281091,67281567,67281724,67282009,67282201,67282503,67282742,67284275,67284713,67285290,67286274,67286445,67286749,67287000,67287898,67288167,67288489,67288803 67280396,67281005,67281184,67281644,67281837,67282107,67282349,67282641,67282858,67284457,67285215,67285536,67286363,67286666,67286919,67287177,67288014,67288400,67288604,67289499 Gene ID= ENSG00000196155.12 TPM= 2.42 Transcript Type= protein_coding chr16 67279517 67287613 67279517 67287613 + transcript3307.chr16.nic@PLEKHG4 transcript3307.chr16.nic protein_coding 67279517,67279876,67280711,67280882,67281091,67281567,67281724,67282009,67282201,67282503,67282742,67284275,67284713,67285290,67286274,67286445,67286749,67287000 67279661,67280543,67280806,67281005,67281184,67281644,67281837,67282107,67282349,67282641,67282858,67284457,67285215,67285536,67286363,67286666,67286919,67287613 Gene ID= ENSG00000196155.12 TPM= 1.81 Transcript Type= NA chr16 67389809 67393535 67389809 67393535 - ENST00000393957.6@TPPP3 ENST00000393957.6 protein_coding 67393380,67390924,67390479,67389809 67393535,67391117,67390632,67390362 Gene ID= ENSG00000159713.10 TPM= 1.81 Transcript Type= protein_coding chr16 67394418 67416497 67394418 67416497 - transcript3311.chr16.nic@ZDHHC1 transcript3311.chr16.nic protein_coding 67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395187,67395002,67394418 67416497,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395221,67395062,67394893 Gene ID= ENSG00000159714.10 TPM= 1.81 Transcript Type= NA chr16 67394418 67416497 67394418 67416497 - transcript3312.chr16.nic@ZDHHC1 transcript3312.chr16.nic protein_coding 67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395187,67395002,67394418 67416497,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395280,67395062,67394893 Gene ID= ENSG00000159714.10 TPM= 19.02 Transcript Type= NA chr16 67394418 67416497 67394418 67416497 - transcript3315.chr16.nnic@ZDHHC1 transcript3315.chr16.nnic protein_coding 67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395002,67394418 67416497,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395062,67394893 Gene ID= ENSG00000159714.10 TPM= 1.81 Transcript Type= NA chr16 67394418 67416497 67394418 67416497 - transcript3317.chr16.nic@ZDHHC1 transcript3317.chr16.nic protein_coding 67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395002,67394418 67416497,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395280,67394893 Gene ID= ENSG00000159714.10 TPM= 2.72 Transcript Type= NA chr16 67403628 67416497 67403628 67416497 - transcript3321.chr16.nic@ZDHHC1 transcript3321.chr16.nic protein_coding 67416171,67407767,67403628 67416497,67407813,67406442 Gene ID= ENSG00000159714.10 TPM= 4.53 Transcript Type= NA chr16 67394419 67416474 67394419 67416474 - ENST00000348579.6@ZDHHC1 ENST00000348579.6 protein_coding 67416171,67407767,67406200,67400957,67399355,67398820,67398573,67398212,67395484,67395002,67394419 67416474,67407813,67406442,67401132,67399456,67398944,67398731,67398324,67395566,67395221,67394893 Gene ID= ENSG00000159714.10 TPM= 1.81 Transcript Type= protein_coding chr16 67431117 67437553 67431117 67437553 + ENST00000326152.5@HSD11B2 ENST00000326152.5 protein_coding 67431117,67435628,67435957,67436249,67436588 67431513,67435840,67436142,67436386,67437553 Gene ID= ENSG00000176387.6 TPM= 1.81 Transcript Type= protein_coding chr16 67438021 67481191 67438021 67481191 - transcript3323.chr16.nic@ATP6V0D1 transcript3323.chr16.nic protein_coding 67480957,67453544,67444528,67443099,67439274,67438971,67438793,67438021 67481191,67453715,67444706,67443178,67439351,67439095,67438870,67438689 Gene ID= ENSG00000159720.11 TPM= 10.41 Transcript Type= NA chr16 67438019 67481237 67438019 67481237 - ENST00000290949.7@ATP6V0D1 ENST00000290949.7 protein_coding 67480957,67453544,67444528,67443099,67439274,67438971,67438793,67438019 67481237,67453715,67444706,67443178,67439351,67439147,67438870,67438689 Gene ID= ENSG00000159720.11 TPM= 326.45 Transcript Type= protein_coding chr16 67482568 67483522 67482568 67483522 - transcript3334.chr16.nic@AGRP transcript3334.chr16.nic protein_coding 67483269,67483025,67482568 67483522,67483110,67482818 Gene ID= ENSG00000159723.4 TPM= 1.81 Transcript Type= NA chr16 67482571 67483813 67482571 67483813 - ENST00000290953.2@AGRP ENST00000290953.2 protein_coding 67483517,67483269,67483025,67482571 67483813,67483401,67483110,67482818 Gene ID= ENSG00000159723.4 TPM= 11.77 Transcript Type= protein_coding chr16 67528817 67546786 67528817 67546786 + ENST00000379312.7@RIPOR1 ENST00000379312.7 protein_coding 67528817,67538424,67538660,67538990,67539728,67539846,67540053,67540300,67540458,67540579,67541430,67541653,67541867,67543348,67544299,67544695,67544956,67545376,67545664,67545949,67546141,67546366 67528914,67538550,67538824,67539068,67539751,67539899,67540205,67540363,67540501,67540704,67541578,67541782,67543264,67543469,67544431,67544830,67545117,67545534,67545860,67546032,67546231,67546786 Gene ID= ENSG00000039523.19 TPM= 13.58 Transcript Type= protein_coding chr16 67544485 67546784 67544485 67546784 + transcript3340.chr16.nic@RIPOR1 transcript3340.chr16.nic protein_coding 67544485,67544956,67545949,67546141 67544830,67545860,67546032,67546784 Gene ID= ENSG00000039523.19 TPM= 1.81 Transcript Type= NA chr16 67562407 67639183 67562407 67639183 + ENST00000264010.8@CTCF ENST00000264010.8 protein_coding 67562407,67571148,67610824,67611951,67616745,67620697,67621442,67626555,67628370,67629398,67636690,67637688 67562724,67571264,67611613,67612121,67616878,67620817,67621591,67626715,67628552,67629533,67636851,67639183 Gene ID= ENSG00000102974.14 TPM= 46.18 Transcript Type= protein_coding chr16 67657563 67660281 67657563 67660281 - ENST00000602860.5@ACD ENST00000602860.5 protein_coding 67660122,67659903,67659702,67658928,67658720,67658555,67657986,67657762,67657563 67660281,67660045,67659795,67659613,67658816,67658641,67658362,67657853,67657684 Gene ID= ENSG00000102977.13 TPM= 5.43 Transcript Type= retained_intron chr16 67660959 67662774 67660959 67662774 + ENST00000219255.3@PARD6A ENST00000219255.3 protein_coding 67660959,67661455,67661893 67661101,67661677,67662774 Gene ID= ENSG00000102981.9 TPM= 17.21 Transcript Type= protein_coding chr16 67662945 67666764 67662945 67666764 - ENST00000243878.8@ENKD1 ENST00000243878.8 protein_coding 67666358,67666071,67664996,67663937,67663657,67663420,67662945 67666764,67666265,67665168,67664062,67663820,67663556,67663321 Gene ID= ENSG00000124074.11 TPM= 9.96 Transcript Type= protein_coding chr16 67666822 67668752 67666822 67668752 + transcript3358.chr16.nic@C16orf86 transcript3358.chr16.nic protein_coding 67666822,67667296,67667878 67667072,67667525,67668752 Gene ID= ENSG00000159761.14 TPM= 4.53 Transcript Type= NA chr16 67666350 67668758 67666350 67668758 + transcript3359.chr16.nic@C16orf86 transcript3359.chr16.nic protein_coding 67666350,67667296,67668200 67667072,67668098,67668758 Gene ID= ENSG00000159761.14 TPM= 2.72 Transcript Type= NA chr16 67666815 67668758 67666815 67668758 + transcript3360.chr16.nic@C16orf86 transcript3360.chr16.nic protein_coding 67666815,67667878,67668200 67667072,67668098,67668758 Gene ID= ENSG00000159761.14 TPM= 2.26 Transcript Type= NA chr16 67666816 67668758 67666816 67668758 + ENST00000403458.8@C16orf86 ENST00000403458.8 protein_coding 67666816,67667296,67667878,67668200 67667072,67667525,67668098,67668758 Gene ID= ENSG00000159761.14 TPM= 9.51 Transcript Type= protein_coding chr16 67674533 67719421 67674533 67719421 - ENST00000268797.11@GFOD2 ENST00000268797.11 protein_coding 67719163,67685457,67674533 67719421,67685802,67676053 Gene ID= ENSG00000141098.12 TPM= 31.69 Transcript Type= protein_coding chr16 67723066 67806652 67723066 67806652 - ENST00000317506.7@RANBP10 ENST00000317506.7 protein_coding 67806302,67805428,67772034,67744288,67738013,67734858,67731472,67729938,67729680,67729280,67728390,67727751,67727327,67723066 67806652,67805539,67772086,67744455,67738035,67735042,67731584,67730046,67729828,67729484,67728511,67727896,67727438,67726558 Gene ID= ENSG00000141084.10 TPM= 14.94 Transcript Type= protein_coding chr16 67723067 67806560 67723067 67806560 - transcript3372.chr16.nic@RANBP10 transcript3372.chr16.nic protein_coding 67806302,67805428,67744288,67738013,67734858,67731472,67729938,67729680,67729280,67728390,67727751,67727327,67723067 67806560,67805539,67744455,67738035,67735042,67731584,67730046,67729828,67729484,67728511,67727896,67727438,67726558 Gene ID= ENSG00000141084.10 TPM= 6.79 Transcript Type= NA chr16 67828157 67847458 67828157 67847458 - ENST00000562787.5@CENPT ENST00000562787.5 protein_coding 67847401,67835538,67835172,67833750,67832455,67832228,67832012,67831754,67831576,67831216,67830390,67829765,67829423,67828667,67828474,67828157 67847458,67835658,67835300,67834100,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67830088,67829516,67828843,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 45.39 Transcript Type= protein_coding chr16 67828159 67833937 67828159 67833937 - transcript3381.chr16.nnic@CENPT transcript3381.chr16.nnic protein_coding 67833750,67832455,67832228,67832012,67831754,67831576,67831216,67830249,67829765,67829423,67828667,67828474,67828159 67833937,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67830160,67829516,67828843,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 6.45 Transcript Type= NA chr16 67828159 67833937 67828159 67833937 - transcript3386.chr16.nic@CENPT transcript3386.chr16.nic protein_coding 67833750,67832455,67832228,67832012,67831754,67831576,67831216,67829765,67829423,67828667,67828474,67828159 67833937,67832545,67832350,67832108,67831890,67831612,67831358,67830548,67829516,67828843,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 3.02 Transcript Type= NA chr16 67828159 67833937 67828159 67833937 - transcript3392.chr16.nic@CENPT transcript3392.chr16.nic protein_coding 67833750,67832455,67832228,67832012,67831754,67831576,67829765,67829423,67828667,67828474,67828159 67833937,67832545,67832315,67832108,67831890,67831612,67831358,67829516,67828843,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 12.97 Transcript Type= NA chr16 67828159 67833937 67828159 67833937 - transcript3397.chr16.nic@CENPT transcript3397.chr16.nic protein_coding 67833750,67832228,67832012,67831754,67831576,67829765,67828667,67828474,67828159 67833937,67832545,67832108,67831890,67831612,67831358,67829516,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 3.73 Transcript Type= NA chr16 67828159 67833897 67828159 67833897 - ENST00000565157.5@CENPT ENST00000565157.5 protein_coding 67833750,67832455,67832228,67832012,67831754,67831576,67831216,67829765,67829423,67828667,67828474,67828159 67833897,67832545,67832315,67832108,67831890,67831612,67831358,67830548,67829516,67828843,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 24.74 Transcript Type= retained_intron chr16 67828157 67833913 67828157 67833913 - ENST00000569862.5@CENPT ENST00000569862.5 protein_coding 67833750,67832228,67832012,67831754,67831576,67829765,67829423,67828667,67828474,67828157 67833913,67832545,67832108,67831890,67831612,67831358,67829516,67828843,67828578,67828390 Gene ID= ENSG00000102901.12 TPM= 7.53 Transcript Type= retained_intron chr16 67846732 67872567 67846732 67872567 + ENST00000219169.8@NUTF2 ENST00000219169.8 protein_coding 67846732,67865102,67868340,67868501,67870800 67846985,67865229,67868411,67868599,67872567 Gene ID= ENSG00000102898.11 TPM= 41.2 Transcript Type= protein_coding chr16 67847161 67871323 67847161 67871323 + ENST00000569436.6@NUTF2 ENST00000569436.6 protein_coding 67847161,67865102,67868340,67868501,67870800 67847456,67865229,67868411,67868599,67871323 Gene ID= ENSG00000102898.11 TPM= 19.47 Transcript Type= protein_coding chr16 67873065 67884515 67873065 67884515 + transcript3404.chr16.nic@EDC4 transcript3404.chr16.nic protein_coding 67873065,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883115,67883568,67883956 67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883006,67883177,67883731,67884515 Gene ID= ENSG00000038358.14 TPM= 2.72 Transcript Type= NA chr16 67873076 67884515 67873076 67884515 + transcript3410.chr16.nic@EDC4 transcript3410.chr16.nic protein_coding 67873076,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67882212,67882429,67882679,67882958,67883568,67883956 67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67882109,67882327,67882594,67882865,67883177,67883731,67884515 Gene ID= ENSG00000038358.14 TPM= 7.61 Transcript Type= NA chr16 67873059 67884515 67873059 67884515 + transcript3411.chr16.nic@EDC4 transcript3411.chr16.nic protein_coding 67873059,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956 67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884515 Gene ID= ENSG00000038358.14 TPM= 3.08 Transcript Type= NA chr16 67873044 67884515 67873044 67884515 + transcript3413.chr16.nic@EDC4 transcript3413.chr16.nic protein_coding 67873044,67875945,67876488,67876873,67877217,67877509,67877741,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956 67873343,67876101,67876599,67876972,67877406,67877656,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884515 Gene ID= ENSG00000038358.14 TPM= 8.51 Transcript Type= NA chr16 67873023 67884503 67873023 67884503 + ENST00000358933.9@EDC4 ENST00000358933.9 protein_coding 67873023,67875945,67876488,67876873,67877217,67877509,67877741,67878166,67878360,67878536,67878737,67878957,67879237,67879412,67879587,67879850,67880063,67880557,67881076,67881265,67881497,67881668,67881954,67882212,67882429,67882679,67882958,67883568,67883956 67873343,67876101,67876599,67876972,67877406,67877656,67877845,67878275,67878443,67878631,67878839,67879137,67879309,67879503,67879774,67879971,67880216,67880990,67881180,67881417,67881533,67881845,67882109,67882327,67882594,67882865,67883177,67883731,67884503 Gene ID= ENSG00000038358.14 TPM= 78.24 Transcript Type= protein_coding chr16 67893301 67903145 67893301 67903145 + ENST00000575198.1@PSKH1 ENST00000575198.1 protein_coding 67893301,67903032 67893371,67903145 Gene ID= ENSG00000159792.9 TPM= 2.72 Transcript Type= processed_transcript chr16 67934502 67937087 67934502 67937087 - ENST00000358514.8@PSMB10 ENST00000358514.8 protein_coding 67936694,67936398,67936215,67935963,67935582,67935420,67934797,67934502 67937087,67936485,67936312,67936103,67935697,67935478,67934948,67934671 Gene ID= ENSG00000205220.11 TPM= 43.92 Transcript Type= protein_coding chr16 67934505 67936849 67934505 67936849 - transcript3424.chr16.nic@PSMB10 transcript3424.chr16.nic protein_coding 67936694,67936398,67936215,67935963,67935582,67934797,67934505 67936849,67936485,67936312,67936103,67935697,67935478,67934671 Gene ID= ENSG00000205220.11 TPM= 1.81 Transcript Type= NA chr16 67934506 67935795 67934506 67935795 - ENST00000570985.1@PSMB10 ENST00000570985.1 protein_coding 67935582,67935420,67934797,67934506 67935795,67935478,67934948,67934671 Gene ID= ENSG00000205220.11 TPM= 8.6 Transcript Type= retained_intron chr16 68023253 68079320 68023253 68079320 + ENST00000358896.10@DUS2 ENST00000358896.10 protein_coding 68023253,68038006,68049505,68053564,68054574,68056364,68061066,68066317,68066566,68070134,68070940,68074034,68075355,68076632,68078445,68078749 68023351,68038149,68049550,68053655,68054617,68056424,68061113,68066382,68066636,68070220,68071108,68074155,68075504,68076719,68078518,68079320 Gene ID= ENSG00000167264.17 TPM= 5.43 Transcript Type= protein_coding chr16 68245329 68261062 68245329 68261062 + transcript3444.chr16.nic@PLA2G15 transcript3444.chr16.nic protein_coding 68245329,68249290,68253422,68254919,68255282,68255766,68259146 68245553,68249446,68253517,68255037,68255380,68255990,68261062 Gene ID= ENSG00000103066.12 TPM= 5.89 Transcript Type= NA chr16 68245344 68261062 68245344 68261062 + ENST00000219345.9@PLA2G15 ENST00000219345.9 protein_coding 68245344,68249290,68254919,68255282,68255766,68259146 68245553,68249446,68255037,68255380,68255990,68261062 Gene ID= ENSG00000103066.12 TPM= 66.56 Transcript Type= protein_coding chr16 68264189 68288966 68264189 68288966 + transcript3452.chr16.nnic@SLC7A6 transcript3452.chr16.nnic protein_coding 68264189,68273795,68274691,68287746 68266721,68273904,68275249,68288966 Gene ID= ENSG00000103064.13 TPM= 1.81 Transcript Type= NA chr16 68298166 68310946 68298166 68310946 - ENST00000561933.1@SLC7A6OS ENST00000561933.1 protein_coding 68310335,68304026,68302381,68298166 68310946,68304232,68302501,68301405 Gene ID= ENSG00000103061.12 TPM= 1.81 Transcript Type= retained_intron chr16 68311037 68357265 68311037 68357265 + transcript3453.chr16.nnic@PRMT7 transcript3453.chr16.nnic protein_coding 68311037,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68351390,68352248,68353492,68355723,68356701,68357054 68311099,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68351814,68352409,68353566,68355883,68356797,68357265 Gene ID= ENSG00000132600.16 TPM= 2.83 Transcript Type= NA chr16 68310974 68357265 68310974 68357265 + transcript3457.chr16.nic@PRMT7 transcript3457.chr16.nic protein_coding 68310974,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353395,68355723,68356701,68357054 68311099,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357265 Gene ID= ENSG00000132600.16 TPM= 2.72 Transcript Type= NA chr16 68310974 68357265 68310974 68357265 + transcript3458.chr16.nic@PRMT7 transcript3458.chr16.nic protein_coding 68310974,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054 68311099,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357265 Gene ID= ENSG00000132600.16 TPM= 15.2 Transcript Type= NA chr16 68310974 68357342 68310974 68357342 + transcript3463.chr16.nic@PRMT7 transcript3463.chr16.nic protein_coding 68310974,68312042,68315897,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054 68311099,68312176,68316074,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357342 Gene ID= ENSG00000132600.16 TPM= 3.43 Transcript Type= NA chr16 68310994 68357264 68310994 68357264 + transcript3466.chr16.nic@PRMT7 transcript3466.chr16.nic protein_coding 68310994,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353395,68355723,68356701,68357054 68311099,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357264 Gene ID= ENSG00000132600.16 TPM= 1.81 Transcript Type= NA chr16 68310994 68358583 68310994 68358583 + transcript3467.chr16.nic@PRMT7 transcript3467.chr16.nic protein_coding 68310994,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054 68311099,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68358583 Gene ID= ENSG00000132600.16 TPM= 16.11 Transcript Type= NA chr16 68311015 68357265 68311015 68357265 + transcript3478.chr16.nic@PRMT7 transcript3478.chr16.nic protein_coding 68311015,68312042,68315897,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68352248,68353492,68355723,68356701,68357054 68311111,68312176,68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68352409,68353566,68355883,68356797,68357265 Gene ID= ENSG00000132600.16 TPM= 1.92 Transcript Type= NA chr16 68315896 68357265 68315896 68357265 + ENST00000441236.2@PRMT7 ENST00000441236.2 protein_coding 68315896,68321426,68324683,68329066,68337459,68339322,68339788,68345675,68346145,68347211,68347631,68348342,68352248,68353492,68355723,68356701,68357054 68316074,68321462,68324832,68329174,68337571,68339563,68339968,68345802,68346280,68347294,68347678,68348431,68352409,68353566,68355883,68356797,68357265 Gene ID= ENSG00000132600.16 TPM= 1.62 Transcript Type= protein_coding chr16 68539297 68567135 68539297 68567135 + ENST00000564558.5@ZFP90 ENST00000564558.5 protein_coding 68539297,68539758,68557998,68558375,68563044 68539479,68539825,68558124,68558568,68567135 Gene ID= ENSG00000184939.15 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr16 68843534 69084210 68843534 69084210 + transcript3493.chr16.nnic@TANGO6 transcript3493.chr16.nnic protein_coding 68843534,68859884,68862945,68867079,68875154,68878118,68880548,68900434,68902328,68907443,68909211,68919085,68927568,68930238,68974028,69022828,69040308,69083485 68843711,68860524,68863061,68867161,68875290,68878280,68880630,68900546,68902504,68907575,68909402,68919219,68928083,68930295,68974168,69022979,69040421,69084210 Gene ID= ENSG00000103047.7 TPM= 1.81 Transcript Type= NA chr16 68843606 69085180 68843606 69085180 + ENST00000261778.1@TANGO6 ENST00000261778.1 protein_coding 68843606,68859884,68862945,68867079,68875154,68878118,68880548,68900434,68902328,68907443,68909211,68919085,68927568,68930238,68974028,69022828,69040308,69083485 68843711,68860524,68863061,68867220,68875290,68878280,68880630,68900546,68902504,68907575,68909402,68919219,68928083,68930295,68974168,69022979,69040421,69085180 Gene ID= ENSG00000103047.7 TPM= 12.68 Transcript Type= protein_coding chr16 69118010 69132606 69118010 69132606 - transcript3502.chr16.nic@CHTF8 transcript3502.chr16.nic protein_coding 69132484,69121436,69121053,69118010 69132606,69121493,69121170,69118525 Gene ID= ENSG00000168802.12 TPM= 3.62 Transcript Type= NA chr16 69118011 69132606 69118011 69132606 - transcript3503.chr16.nic@CHTF8 transcript3503.chr16.nic protein_coding 69132484,69121436,69120107,69118011 69132606,69121493,69120649,69118525 Gene ID= ENSG00000168802.12 TPM= 1.81 Transcript Type= NA chr16 69118010 69132570 69118010 69132570 - ENST00000448552.6@CHTF8 ENST00000448552.6 protein_coding 69132484,69121436,69121053,69118010 69132570,69121493,69121170,69120649 Gene ID= ENSG00000168802.12 TPM= 71.54 Transcript Type= protein_coding chr16 69132596 69169020 69132596 69169020 + ENST00000562237.5@UTP4 ENST00000562237.5 protein_coding 69132596,69133512,69136696,69137801,69139825,69143178,69150537,69150813,69153584,69154393,69155871,69157084,69160356,69163083,69165341,69167075,69168821 69132689,69133618,69136887,69137885,69139914,69143389,69150708,69150904,69153680,69154457,69155993,69157240,69160462,69163178,69165526,69167185,69169020 Gene ID= ENSG00000141076.17 TPM= 6.34 Transcript Type= protein_coding chr16 69311356 69326939 69311356 69326939 + ENST00000254950.12@VPS4A ENST00000254950.12 protein_coding 69311356,69316008,69316225,69318650,69318823,69319387,69320141,69320688,69321051,69322560,69324208 69311532,69316119,69316372,69318711,69318942,69319543,69320289,69320769,69321270,69322700,69326939 Gene ID= ENSG00000132612.15 TPM= 219.14 Transcript Type= protein_coding chr16 69332596 69339583 69332596 69339583 - ENST00000562081.2@COG8 ENST00000562081.2 protein_coding 69339176,69336505,69334521,69332596 69339583,69336712,69335348,69332882 Gene ID= ENSG00000213380.14 TPM= 21.73 Transcript Type= protein_coding chr16 69326913 69339667 69326913 69339667 - ENST00000306875.8@COG8 ENST00000306875.8 protein_coding 69339176,69336505,69334521,69332714,69330813,69326913 69339667,69336712,69335348,69332882,69331095,69329179 Gene ID= ENSG00000272617.2 TPM= 55.24 Transcript Type= protein_coding chr16 69333040 69339593 69333040 69339593 - transcript3522.chr16.nic@COG8 transcript3522.chr16.nic protein_coding 69339176,69336505,69333040 69339593,69336712,69335348 Gene ID= ENSG00000272617.2 TPM= 6.34 Transcript Type= NA chr16 69328621 69330595 69328621 69330595 - ENST00000288022.1@PDF ENST00000288022.1 protein_coding 69329997,69328621 69330595,69329179 Gene ID= ENSG00000258429.1 TPM= 19.92 Transcript Type= protein_coding chr16 69364968 69386006 69364968 69386006 - transcript3526.chr16.nic@TERF2 transcript3526.chr16.nic protein_coding 69385593,69385391,69384580,69372269,69370483,69368376,69364968 69386006,69385486,69384710,69372355,69370629,69368482,69367199 Gene ID= ENSG00000132604.10 TPM= 2.72 Transcript Type= NA chr16 69355561 69385988 69355561 69385988 - ENST00000254942.7@TERF2 ENST00000254942.7 protein_coding 69385593,69385391,69384580,69372269,69370483,69368376,69366807,69361404,69357518,69355561 69385988,69385486,69384710,69372355,69370629,69368482,69367199,69361489,69357561,69357056 Gene ID= ENSG00000132604.10 TPM= 32.6 Transcript Type= protein_coding chr16 69424619 69450238 69424619 69450238 + ENST00000514123.5@CYB5B ENST00000514123.5 protein_coding 69424619,69447150,69448115 69424857,69447278,69450238 Gene ID= ENSG00000103018.16 TPM= 2.72 Transcript Type= retained_intron chr16 69709401 69726951 69709401 69726951 - ENST00000320623.9@NQO1 ENST00000320623.9 protein_coding 69726433,69718370,69718123,69714964,69713028,69709401 69726951,69718534,69718253,69715077,69713129,69711281 Gene ID= ENSG00000181019.12 TPM= 43.47 Transcript Type= protein_coding chr16 69709401 69726668 69709401 69726668 - ENST00000379047.7@NQO1 ENST00000379047.7 protein_coding 69726433,69718370,69718123,69714964,69709401 69726668,69718534,69718253,69715077,69711281 Gene ID= ENSG00000181019.12 TPM= 5.43 Transcript Type= protein_coding chr16 69741853 69754969 69741853 69754969 - transcript3539.chr16.nic@NOB1 transcript3539.chr16.nic protein_coding 69754848,69754594,69752241,69749559,69749213,69748951,69748232,69744873,69741853 69754969,69754726,69752371,69749630,69749338,69749118,69748329,69745017,69742601 Gene ID= ENSG00000141101.12 TPM= 6.34 Transcript Type= NA chr16 69741853 69754969 69741853 69754969 - transcript3540.chr16.nic@NOB1 transcript3540.chr16.nic protein_coding 69754848,69754594,69749559,69749213,69748918,69748232,69744873,69741853 69754969,69754726,69749630,69749338,69749118,69748329,69745017,69742601 Gene ID= ENSG00000141101.12 TPM= 2.72 Transcript Type= NA chr16 69741867 69754940 69741867 69754940 - ENST00000268802.9@NOB1 ENST00000268802.9 protein_coding 69754848,69754594,69752241,69749559,69749213,69748918,69748232,69744873,69741867 69754940,69754726,69752371,69749630,69749338,69749118,69748329,69745017,69742601 Gene ID= ENSG00000141101.12 TPM= 96.89 Transcript Type= protein_coding chr16 69762291 69941742 69762291 69941742 + transcript3546.chr16.nic@WWP2 transcript3546.chr16.nic protein_coding 69762291,69776189,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841 69762391,69776241,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941742 Gene ID= ENSG00000198373.12 TPM= 17.32 Transcript Type= NA chr16 69762289 69910341 69762289 69910341 + transcript3556.chr16.nic@WWP2 transcript3556.chr16.nic protein_coding 69762289,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761 69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69910341 Gene ID= ENSG00000198373.12 TPM= 8.15 Transcript Type= NA chr16 69762306 69941741 69762306 69941741 + ENST00000359154.6@WWP2 ENST00000359154.6 protein_coding 69762306,69786996,69798682,69799174,69840126,69842024,69871804,69888039,69908761,69917709,69925430,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841 69762391,69787080,69798829,69799295,69840263,69842120,69871931,69888249,69908850,69917883,69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941741 Gene ID= ENSG00000198373.12 TPM= 74.98 Transcript Type= protein_coding chr16 69924990 69941738 69924990 69941738 + ENST00000568684.1@WWP2 ENST00000568684.1 protein_coding 69924990,69929448,69930130,69931152,69931509,69931802,69933970,69935853,69936312,69937118,69937548,69939027,69939341,69939841 69925484,69929529,69930258,69931227,69931580,69931890,69934129,69935986,69936452,69937238,69937652,69939123,69939413,69941738 Gene ID= ENSG00000198373.12 TPM= 6.16 Transcript Type= protein_coding chr16 69951245 69963984 69951245 69963984 + transcript3561.chr16.nic@CLEC18A transcript3561.chr16.nic protein_coding 69951245,69952035,69958942,69959460,69959739,69960373,69960845,69961586,69961988,69962976,69963574 69951490,69952126,69959039,69959581,69959846,69960465,69960951,69961715,69962084,69963067,69963984 Gene ID= ENSG00000157322.17 TPM= 9.96 Transcript Type= NA chr16 69951313 69963984 69951313 69963984 + transcript3565.chr16.nic@CLEC18A transcript3565.chr16.nic protein_coding 69951313,69952035,69958942,69959460,69959739,69960373,69962976,69963574 69951490,69954573,69959039,69959581,69959846,69962084,69963067,69963984 Gene ID= ENSG00000157322.17 TPM= 1.81 Transcript Type= NA chr16 69976384 70065870 69976384 70065870 - transcript3568.chr16.nic@PDXDC2P-NPIPB14P transcript3568.chr16.nic processed_transcript 70065756,70042930,70042351,70038905,70036432,70034171,70031900,70030988,70024586,70023630,70023379,70021824,70018047,70014104,70011841,70010751,69996390,69996069,69990597,69986381,69982658,69982350,69978222,69978077,69976384 70065870,70043003,70042416,70038985,70036578,70034360,70031968,70031066,70024670,70023678,70023477,70021949,70018097,70014167,70011929,70010856,69996468,69996226,69990683,69986509,69982757,69982494,69978282,69978112,69976732 Gene ID= ENSG00000196696.12 TPM= 3.17 Transcript Type= NA chr16 69976352 70065853 69976352 70065853 - ENST00000530079.5@PDXDC2P-NPIPB14P ENST00000530079.5 processed_transcript 70065756,70042930,70042351,70038905,70036432,70034171,70031900,70030988,70024586,70023630,70023379,70021824,70018047,70014104,70011841,70010751,69996390,69996069,69990597,69986381,69982658,69982350,69978222,69978077,69976352 70065853,70043003,70042416,70039100,70036578,70034360,70031968,70031066,70024670,70023678,70023477,70021949,70018097,70014167,70011929,70010856,69996468,69996226,69990683,69986509,69982757,69982494,69978282,69978112,69976732 Gene ID= ENSG00000196696.12 TPM= 3.17 Transcript Type= processed_transcript chr16 70198951 70206272 70198951 70206272 + transcript3585.chr16.nnic@AC009060.2 transcript3585.chr16.nnic processed_pseudogene 70198951,70200969,70202353,70203512,70203922 70199190,70201086,70202459,70203721,70206272 Gene ID= ENSG00000261145.1 TPM= 7.24 Transcript Type= NA chr16 70198951 70205948 70198951 70205948 + transcript3586.chr16.nnic@AC009060.2 transcript3586.chr16.nnic processed_pseudogene 70198951,70200969,70202353,70203512,70203797 70199190,70201086,70202459,70203753,70205948 Gene ID= ENSG00000261145.1 TPM= 2.84 Transcript Type= NA chr16 70198864 70206272 70198864 70206272 + transcript3595.chr16.nnic@AC009060.2 transcript3595.chr16.nnic processed_pseudogene 70198864,70202353,70203512,70203922 70199190,70202459,70203721,70206272 Gene ID= ENSG00000261145.1 TPM= 6.34 Transcript Type= NA chr16 70198864 70205950 70198864 70205950 + transcript3601.chr16.nnic@AC009060.2 transcript3601.chr16.nnic processed_pseudogene 70198864,70202353,70203512,70203825 70199190,70202459,70203783,70205950 Gene ID= ENSG00000261145.1 TPM= 2.84 Transcript Type= NA chr16 70202046 70206179 70202046 70206179 + transcript3612.chr16.nnic@AC009060.2 transcript3612.chr16.nnic processed_pseudogene 70202046,70203512,70203825 70202459,70203783,70206179 Gene ID= ENSG00000261145.1 TPM= 2.84 Transcript Type= NA chr16 70252295 70289543 70252295 70289543 - ENST00000261772.12@AARS ENST00000261772.12 protein_coding 70289421,70282620,70276966,70276486,70271781,70270196,70269618,70268271,70267659,70265538,70264958,70262346,70261044,70258980,70258033,70255728,70254621,70253919,70253714,70253268,70252295 70289543,70282784,70277154,70276631,70271972,70270340,70269763,70268379,70267809,70265662,70265102,70262524,70261157,70259186,70258217,70255836,70254734,70254038,70253800,70253381,70252906 Gene ID= ENSG00000090861.15 TPM= 242.69 Transcript Type= protein_coding chr16 70299053 70335283 70299053 70335283 + ENST00000288071.10@DDX19B ENST00000288071.10 protein_coding 70299053,70312609,70314902,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521 70299354,70312657,70314955,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70335283 Gene ID= ENSG00000157349.16 TPM= 26.49 Transcript Type= protein_coding chr16 70299187 70335277 70299187 70335277 + transcript3634.chr16.nic@DDX19B transcript3634.chr16.nic protein_coding 70299187,70314902,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521 70299354,70314955,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70335277 Gene ID= ENSG00000157349.16 TPM= 4.75 Transcript Type= NA chr16 70299194 70333823 70299194 70333823 + ENST00000355992.7@DDX19B ENST00000355992.7 protein_coding 70299194,70312609,70314902,70315969,70324585,70325574,70329292,70329831,70331722,70332968,70333521 70299354,70312657,70314955,70316104,70324687,70325688,70329469,70330068,70331884,70333159,70333823 Gene ID= ENSG00000157349.16 TPM= 2.94 Transcript Type= protein_coding chr16 70299162 70333826 70299162 70333826 + ENST00000393657.6@DDX19B ENST00000393657.6 protein_coding 70299162,70315969,70317496,70324585,70325574,70329292,70329831,70331722,70332968,70333521 70299354,70316104,70317588,70324687,70325688,70329469,70330068,70331884,70333159,70333826 Gene ID= ENSG00000157349.16 TPM= 1.13 Transcript Type= protein_coding chr16 70346861 70373384 70346861 70373384 + transcript3638.chr16.nic@DDX19A transcript3638.chr16.nic protein_coding 70346861,70350557,70355485,70356112,70356846,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925 70347048,70350605,70355535,70356247,70356906,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373384 Gene ID= ENSG00000168872.16 TPM= 9.51 Transcript Type= NA chr16 70346829 70373383 70346829 70373383 + ENST00000302243.11@DDX19A ENST00000302243.11 protein_coding 70346829,70350557,70355485,70356112,70361418,70364543,70365017,70366085,70366624,70370223,70371372,70371925 70347048,70350605,70355535,70356247,70361510,70364645,70365131,70366262,70366861,70370385,70371563,70373383 Gene ID= ENSG00000168872.16 TPM= 63.84 Transcript Type= protein_coding chr16 70379503 70439082 70379503 70439082 - transcript3648.chr16.nnic@ST3GAL2 transcript3648.chr16.nnic protein_coding 70438949,70412787,70398192,70394982,70388367,70383190,70382805,70379503 70439082,70412879,70399533,70395175,70388546,70383235,70382924,70381862 Gene ID= ENSG00000157350.12 TPM= 10.87 Transcript Type= NA chr16 70379435 70439088 70379435 70439088 - ENST00000342907.2@ST3GAL2 ENST00000342907.2 protein_coding 70438949,70398192,70394982,70388367,70383190,70382805,70379435 70439088,70399533,70395175,70388546,70383235,70382924,70381862 Gene ID= ENSG00000157350.12 TPM= 43.47 Transcript Type= protein_coding chr16 70454584 70480275 70454584 70480275 + transcript3657.chr16.nnic@FUK transcript3657.chr16.nnic protein_coding 70454584,70463169,70463623,70465126,70466132,70466882,70467374,70468849,70469152,70470314,70470971,70471182,70472541,70472983,70474129,70474528,70474790,70475350,70475648,70478272,70478551,70479180,70479579 70454630,70463272,70463774,70465176,70466257,70466954,70467471,70468968,70469323,70470426,70471072,70471352,70472605,70473353,70474339,70474694,70475011,70475493,70475767,70478459,70478650,70479403,70480275 Gene ID= ENSG00000157353.16 TPM= 3.17 Transcript Type= NA chr16 70454421 70480274 70454421 70480274 + ENST00000288078.10@FUK ENST00000288078.10 protein_coding 70454421,70463169,70463623,70465126,70466132,70466882,70467374,70467886,70468849,70469152,70470314,70470971,70471182,70472541,70472983,70474129,70474528,70474790,70475350,70475648,70478272,70478551,70479180,70479579 70454630,70463272,70463774,70465176,70466257,70466954,70467471,70467966,70468968,70469323,70470426,70471072,70471352,70472605,70473353,70474339,70474694,70475011,70475493,70475767,70478459,70478650,70479403,70480274 Gene ID= ENSG00000157353.16 TPM= 35.77 Transcript Type= protein_coding chr16 70480572 70523579 70480572 70523579 - transcript3666.chr16.nic@COG4 transcript3666.chr16.nic protein_coding 70523373,70519649,70517626,70515868,70514335,70512239,70509916,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480572 70523579,70519731,70517740,70516040,70514509,70512432,70510021,70509388,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144 Gene ID= ENSG00000103051.18 TPM= 5.61 Transcript Type= NA chr16 70480567 70523579 70480567 70523579 - transcript3671.chr16.nic@COG4 transcript3671.chr16.nic protein_coding 70523373,70519649,70517626,70514335,70512239,70509916,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480567 70523579,70519731,70517740,70514509,70512432,70510021,70509388,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144 Gene ID= ENSG00000103051.18 TPM= 15.58 Transcript Type= NA chr16 70480569 70523565 70480569 70523565 - ENST00000323786.9@COG4 ENST00000323786.9 protein_coding 70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480569 70523565,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144 Gene ID= ENSG00000103051.18 TPM= 161.07 Transcript Type= protein_coding chr16 70480572 70523554 70480572 70523554 - ENST00000393612.8@COG4 ENST00000393612.8 protein_coding 70523373,70519649,70517626,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70483853,70482729,70482092,70481764,70481359,70480572 70523554,70519731,70517740,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70483969,70482821,70482175,70481865,70481487,70481144 Gene ID= ENSG00000103051.18 TPM= 3.02 Transcript Type= protein_coding chr16 70480568 70523558 70480568 70523558 - ENST00000564415.5@COG4 ENST00000564415.5 protein_coding 70523373,70519649,70517626,70515868,70514335,70512239,70509916,70509231,70508406,70500958,70497937,70497221,70496266,70490330,70483853,70482729,70482092,70481764,70481359,70480568 70523558,70519731,70517740,70516040,70514509,70512432,70510021,70509388,70508464,70501091,70498055,70497387,70496431,70490392,70483969,70482821,70482175,70481865,70481487,70481144 Gene ID= ENSG00000103051.18 TPM= 3.5 Transcript Type= nonsense_mediated_decay chr16 70523788 70572303 70523788 70572303 + transcript3680.chr16.nic@SF3B3 transcript3680.chr16.nic protein_coding 70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70550650,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673 70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70548442,70550678,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70572303 Gene ID= ENSG00000189091.12 TPM= 12.22 Transcript Type= NA chr16 70523788 70577668 70523788 70577668 + ENST00000302516.9@SF3B3 ENST00000302516.9 protein_coding 70523788,70526587,70528873,70530745,70532479,70535308,70538323,70539104,70541669,70544438,70548370,70554446,70555051,70556179,70556886,70560469,70561630,70563876,70565065,70565368,70567411,70568283,70569043,70570006,70571095,70571673 70523928,70526726,70529199,70530917,70532620,70535420,70538460,70539207,70541834,70544533,70548442,70554597,70555206,70556334,70557029,70560591,70561784,70564050,70565270,70565524,70567536,70568495,70569141,70570149,70571199,70577668 Gene ID= ENSG00000189091.12 TPM= 97.8 Transcript Type= protein_coding chr16 70579837 70660683 70579837 70660683 + transcript3693.chr16.nnic@IL34 transcript3693.chr16.nnic protein_coding 70579837,70633275,70646548,70654538,70656602,70656960,70659618,70659997 70580049,70633396,70646975,70654671,70656679,70657121,70659753,70660683 Gene ID= ENSG00000157368.10 TPM= 5.21 Transcript Type= NA chr16 70579849 70660683 70579849 70660683 + transcript3699.chr16.nic@IL34 transcript3699.chr16.nic protein_coding 70579849,70646548,70654538,70656602,70656963,70659618,70659997 70580049,70646975,70654671,70656679,70657121,70659753,70660683 Gene ID= ENSG00000157368.10 TPM= 15.62 Transcript Type= NA chr16 70590274 70660683 70590274 70660683 + transcript3700.chr16.nnic@IL34 transcript3700.chr16.nnic protein_coding 70590274,70646548,70654538,70656602,70656960,70659618,70659997 70590400,70646975,70654671,70656679,70657121,70659753,70660683 Gene ID= ENSG00000157368.10 TPM= 7.02 Transcript Type= NA chr16 70579895 70660682 70579895 70660682 + ENST00000429149.6@IL34 ENST00000429149.6 protein_coding 70579895,70646548,70654538,70656602,70656960,70659618,70659997 70580049,70646975,70654671,70656679,70657121,70659753,70660682 Gene ID= ENSG00000157368.10 TPM= 33.73 Transcript Type= protein_coding chr16 70687439 70801161 70687439 70801161 - ENST00000261776.9@VAC14 ENST00000261776.9 protein_coding 70800797,70786215,70785702,70784776,70784113,70783445,70783033,70781869,70780790,70772109,70762881,70762540,70744423,70731495,70698637,70697139,70695544,70692821,70687439 70801161,70786365,70785869,70784838,70784220,70783554,70783139,70782003,70780939,70772172,70763025,70762605,70744579,70731627,70698811,70697257,70695623,70692971,70688090 Gene ID= ENSG00000103043.14 TPM= 116.82 Transcript Type= protein_coding chr16 71282301 71289409 71282301 71289409 - transcript3717.chr16.nnic@CMTR2 transcript3717.chr16.nnic protein_coding 71289086,71288878,71282301 71289409,71288937,71285939 Gene ID= ENSG00000180917.17 TPM= 8.6 Transcript Type= NA chr16 71282300 71289539 71282300 71289539 - ENST00000434935.6@CMTR2 ENST00000434935.6 protein_coding 71289136,71288878,71282300 71289539,71288937,71285939 Gene ID= ENSG00000180917.17 TPM= 17.66 Transcript Type= protein_coding chr16 71358716 71390438 71358716 71390438 + ENST00000302628.8@CALB2 ENST00000302628.8 protein_coding 71358716,71372153,71374745,71377667,71382719,71383367,71383970,71384339,71384783,71385577,71389749 71358886,71372229,71374834,71377747,71382775,71383444,71384025,71384378,71384836,71385648,71390438 Gene ID= ENSG00000172137.18 TPM= 28.98 Transcript Type= protein_coding chr16 71447597 71462246 71447597 71462246 - ENST00000497160.5@ZNF23 ENST00000497160.5 protein_coding 71462210,71456764,71456072,71454042,71453243,71450590,71447597 71462246,71456828,71456121,71454168,71453350,71450715,71449882 Gene ID= ENSG00000167377.17 TPM= 1.81 Transcript Type= protein_coding chr16 71644929 71723890 71644929 71723890 - transcript3732.chr16.nnic@PHLPP2 transcript3732.chr16.nnic protein_coding 71723769,71702598,71690519,71684476,71681751,71679389,71678755,71676447,71672262,71669275,71667178,71663899,71658653,71658233,71656571,71655240,71652790,71644929 71723890,71702731,71690709,71684601,71681905,71679535,71678985,71676649,71672322,71669370,71667333,71664099,71658815,71658363,71656681,71655434,71653021,71650044 Gene ID= ENSG00000040199.18 TPM= 2.72 Transcript Type= NA chr16 71729004 71809058 71729004 71809058 - transcript3736.chr16.nic@AP1G1 transcript3736.chr16.nic protein_coding 71808505,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729004 71809058,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159 Gene ID= ENSG00000166747.12 TPM= 10.26 Transcript Type= NA chr16 71729000 71809201 71729000 71809201 - ENST00000299980.8@AP1G1 ENST00000299980.8 protein_coding 71808763,71789279,71774468,71773221,71771156,71769623,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729000 71809201,71789482,71774592,71773362,71771252,71769699,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159 Gene ID= ENSG00000166747.12 TPM= 41.05 Transcript Type= protein_coding chr16 71729004 71767165 71729004 71767165 - transcript3739.chr16.nnic@AP1G1 transcript3739.chr16.nnic protein_coding 71767031,71765489,71764646,71764350,71761512,71758808,71756019,71753833,71750210,71749894,71748251,71746588,71745473,71745144,71739234,71738942,71734609,71729004 71767165,71765584,71764726,71764448,71761567,71758921,71756159,71753887,71750332,71749983,71748378,71746692,71745614,71745270,71739341,71739102,71734707,71733159 Gene ID= ENSG00000166747.12 TPM= 10.26 Transcript Type= NA chr16 71895249 71931199 71895249 71931199 + ENST00000378799.10@IST1 ENST00000378799.10 protein_coding 71895249,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924769,71927614 71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71931199 Gene ID= ENSG00000182149.20 TPM= 117.72 Transcript Type= protein_coding chr16 71895495 71929006 71895495 71929006 + transcript3755.chr16.nic@IST1 transcript3755.chr16.nic protein_coding 71895495,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614 71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923384,71929006 Gene ID= ENSG00000182149.20 TPM= 17.81 Transcript Type= NA chr16 71895495 71929006 71895495 71929006 + transcript3756.chr16.nic@IST1 transcript3756.chr16.nic protein_coding 71895495,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71927614 71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929006 Gene ID= ENSG00000182149.20 TPM= 10.41 Transcript Type= NA chr16 71895553 71929008 71895553 71929008 + ENST00000378798.9@IST1 ENST00000378798.9 protein_coding 71895553,71915626,71916462,71917047,71920739,71921343,71922474,71924769,71927614 71895589,71915728,71916642,71917134,71920822,71921453,71922680,71924817,71929008 Gene ID= ENSG00000182149.20 TPM= 3.32 Transcript Type= protein_coding chr16 71895543 71929010 71895543 71929010 + ENST00000329908.12@IST1 ENST00000329908.12 protein_coding 71895543,71915626,71916462,71917047,71920739,71921343,71922474,71923288,71924773,71927614 71895589,71915728,71916642,71917134,71920822,71921453,71922680,71923380,71924817,71929010 Gene ID= ENSG00000182149.20 TPM= 3.32 Transcript Type= protein_coding chr16 71916560 71928974 71916560 71928974 + ENST00000456820.2@IST1 ENST00000456820.2 protein_coding 71916560,71917047,71920739,71921343,71922474,71923288,71927614 71916642,71917134,71920822,71921453,71922680,71923384,71928974 Gene ID= ENSG00000182149.20 TPM= 1.81 Transcript Type= protein_coding chr16 71859680 71884190 71859680 71884190 - ENST00000425432.5@ZNF821 ENST00000425432.5 protein_coding 71883908,71883211,71879907,71867912,71864903,71864138,71861776,71859680 71884190,71883273,71880023,71868037,71865048,71864242,71861942,71860672 Gene ID= ENSG00000102984.14 TPM= 16.75 Transcript Type= protein_coding chr16 71859680 71884190 71859680 71884190 - ENST00000611294.4@ZNF821 ENST00000611294.4 protein_coding 71883908,71883211,71879907,71867912,71864903,71864138,71859680 71884190,71883273,71880023,71868037,71865048,71864242,71860672 Gene ID= ENSG00000102984.14 TPM= 1.36 Transcript Type= protein_coding chr16 72008588 72027664 72008588 72027664 + ENST00000572887.5@DHODH ENST00000572887.5 protein_coding 72008588,72012050,72014473,72017024,72021124,72022362,72023165,72023480,72024145 72008785,72012262,72014672,72017106,72021311,72022475,72023318,72023633,72027664 Gene ID= ENSG00000102967.11 TPM= 6.34 Transcript Type= protein_coding chr16 72054595 72061054 72054595 72061054 + ENST00000355906.9@HP ENST00000355906.9 protein_coding 72054595,72056161,72056530,72057392,72058254,72059114,72060112 72054657,72056243,72056631,72057466,72058355,72059188,72061054 Gene ID= ENSG00000257017.8 TPM= 2.72 Transcript Type= protein_coding chr16 72084853 72093651 72084853 72093651 - ENST00000268483.7@TXNL4B ENST00000268483.7 protein_coding 72093367,72090618,72088987,72084853 72093651,72090786,72089138,72086802 Gene ID= ENSG00000140830.8 TPM= 10.87 Transcript Type= protein_coding chr16 72093847 72112903 72093847 72112903 + transcript3781.chr16.nic@DHX38 transcript3781.chr16.nic protein_coding 72093847,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413,72112625 72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112529,72112903 Gene ID= ENSG00000140829.11 TPM= 3.98 Transcript Type= NA chr16 72093562 72112912 72093562 72112912 + ENST00000268482.7@DHX38 ENST00000268482.7 protein_coding 72093562,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72104486,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413 72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104131,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112912 Gene ID= ENSG00000140829.11 TPM= 32.36 Transcript Type= protein_coding chr16 72093911 72112903 72093911 72112903 + transcript3784.chr16.nic@DHX38 transcript3784.chr16.nic protein_coding 72093911,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413,72112625 72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112529,72112903 Gene ID= ENSG00000140829.11 TPM= 2.17 Transcript Type= NA chr16 72093922 72112911 72093922 72112911 + transcript3785.chr16.nnic@DHX38 transcript3785.chr16.nnic protein_coding 72093922,72096139,72096822,72097677,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413 72094051,72096480,72097009,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104626,72105137,72105348,72105624,72106104,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112911 Gene ID= ENSG00000140829.11 TPM= 3.38 Transcript Type= NA chr16 72093940 72112911 72093940 72112911 + transcript3790.chr16.nic@DHX38 transcript3790.chr16.nic protein_coding 72093940,72096139,72096822,72098645,72098927,72099204,72099732,72100436,72101086,72101500,72103074,72103602,72103946,72105027,72105232,72105517,72106005,72107340,72107645,72108227,72108473,72108800,72109415,72110956,72112413 72094051,72096480,72097781,72098792,72099045,72099280,72099887,72100597,72101193,72101612,72103211,72103788,72104626,72105137,72105348,72105624,72106117,72107548,72107799,72108382,72108607,72108925,72109510,72111077,72112911 Gene ID= ENSG00000140829.11 TPM= 2.47 Transcript Type= NA chr16 72665127 72791719 72665127 72791719 + transcript3795.chr16.nnic@AC004943.2 transcript3795.chr16.nnic antisense_RNA 72665127,72745405,72781728,72787163,72787663 72665333,72745466,72781819,72787350,72791719 Gene ID= ENSG00000259768.5 TPM= 1.81 Transcript Type= NA chr16 72782885 73059698 72782885 73059698 - ENST00000397992.5@ZFHX3 ENST00000397992.5 protein_coding 73058530,72950469,72889731,72829779,72811905,72811577,72800027,72793255,72782885 73059698,72950965,72889962,72829859,72812038,72811777,72800129,72798714,72788848 Gene ID= ENSG00000140836.15 TPM= 3.62 Transcript Type= protein_coding chr16 74296775 74306288 74296775 74306288 + ENST00000219313.8@PSMD7 ENST00000219313.8 protein_coding 74296775,74300115,74301052,74301555,74302212,74304303,74305289 74296988,74300206,74301144,74301652,74302292,74304394,74306288 Gene ID= ENSG00000103035.10 TPM= 134.02 Transcript Type= protein_coding chr16 74330449 74368301 74330449 74368301 - transcript3805.chr16.nnic@AC009053.1 transcript3805.chr16.nnic transcribed_unprocessed_pseudogene 74368065,74360633,74353777,74352297,74352040,74350617,74349742,74348867,74344779,74342130,74338739,74338445,74337475,74336594,74334892,74332567,74331587,74330449 74368301,74360891,74353910,74352378,74352203,74350738,74349859,74349015,74344971,74342254,74338894,74338578,74337623,74336706,74334986,74332656,74331703,74330804 Gene ID= ENSG00000214331.8 TPM= 1.81 Transcript Type= NA chr16 74305126 74368301 74305126 74368301 - transcript3808.chr16.nnic@AC009053.1 transcript3808.chr16.nnic transcribed_unprocessed_pseudogene 74368065,74360633,74353777,74352297,74352040,74350617,74349742,74348867,74344779,74342130,74338739,74338445,74337475,74336594,74334892,74332567,74305126 74368301,74360891,74353910,74352378,74352203,74350738,74349859,74349015,74344971,74342254,74338894,74338578,74337623,74336706,74334986,74332656,74305571 Gene ID= ENSG00000214331.8 TPM= 17.21 Transcript Type= NA chr16 74305739 74367963 74305739 74367963 - transcript3810.chr16.nnic@AC009053.1 transcript3810.chr16.nnic transcribed_unprocessed_pseudogene 74367573,74360633,74353777,74352297,74352040,74350617,74349742,74348867,74344779,74342130,74338739,74338445,74337475,74336594,74334892,74332567,74305739 74367963,74360891,74353910,74352378,74352203,74350738,74349859,74349015,74344971,74342254,74338894,74338578,74337623,74336706,74334986,74332656,74306679 Gene ID= ENSG00000214331.8 TPM= 2.26 Transcript Type= NA chr16 74305126 74368301 74305126 74368301 - transcript3811.chr16.nnic@AC009053.1 transcript3811.chr16.nnic transcribed_unprocessed_pseudogene 74368065,74360633,74353777,74352297,74352040,74350617,74349742,74348867,74344779,74342130,74338739,74338445,74337475,74336594,74334892,74332567,74305126 74368301,74360891,74353910,74352378,74352203,74350738,74349859,74349015,74344971,74342254,74338894,74338578,74337623,74336706,74334986,74332656,74306679 Gene ID= ENSG00000214331.8 TPM= 8.6 Transcript Type= NA chr16 74330449 74368301 74330449 74368301 - transcript3815.chr16.nnic@AC009053.1 transcript3815.chr16.nnic transcribed_unprocessed_pseudogene 74368065,74360633,74353777,74352297,74352040,74350617,74349742,74348867,74344779,74342130,74338739,74338445,74337475,74336594,74334892,74332567,74330449 74368301,74360891,74353910,74352378,74352203,74350738,74349859,74349015,74344971,74342254,74338894,74338578,74337623,74336706,74334986,74332656,74330804 Gene ID= ENSG00000214331.8 TPM= 2.72 Transcript Type= NA chr16 74408633 74421360 74408633 74421360 - transcript3831.chr16.nnic@CLEC18B transcript3831.chr16.nnic protein_coding 74421147,74420501,74418059,74413579,74413037,74412773,74412154,74410738,74410536,74409550,74408633 74421360,74420592,74418298,74413676,74413158,74412880,74412246,74411775,74410632,74409641,74409043 Gene ID= ENSG00000140839.11 TPM= 3.62 Transcript Type= NA chr16 74408633 74421360 74408633 74421360 - transcript3833.chr16.nic@CLEC18B transcript3833.chr16.nic protein_coding 74421147,74420501,74413579,74413037,74412773,74412154,74410905,74410536,74409550,74408633 74421360,74420592,74413676,74413158,74412880,74412246,74411775,74410632,74409641,74409043 Gene ID= ENSG00000140839.11 TPM= 1.81 Transcript Type= NA chr16 74408633 74421360 74408633 74421360 - transcript3836.chr16.nic@CLEC18B transcript3836.chr16.nic protein_coding 74421147,74420501,74413579,74413037,74412773,74412154,74410536,74409550,74408633 74421360,74420592,74413676,74413158,74412880,74412246,74411775,74409641,74409043 Gene ID= ENSG00000140839.11 TPM= 4.53 Transcript Type= NA chr16 74451949 74607114 74451949 74607114 - transcript3847.chr16.nic@GLG1 transcript3847.chr16.nic protein_coding 74606657,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74451949 74607114,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334 Gene ID= ENSG00000090863.11 TPM= 2.56 Transcript Type= NA chr16 74465272 74607119 74465272 74607119 - transcript3851.chr16.nic@GLG1 transcript3851.chr16.nic protein_coding 74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465272 74607119,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813 Gene ID= ENSG00000090863.11 TPM= 6.34 Transcript Type= NA chr16 74447427 74607114 74447427 74607114 - ENST00000205061.9@GLG1 ENST00000205061.9 protein_coding 74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74453171,74447427 74607114,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334,74452131 Gene ID= ENSG00000090863.11 TPM= 27.47 Transcript Type= protein_coding chr16 74451959 74607094 74451959 74607094 - ENST00000422840.6@GLG1 ENST00000422840.6 protein_coding 74606657,74532121,74508839,74503531,74496441,74494760,74492957,74491001,74485796,74483023,74480241,74477396,74474546,74472349,74471173,74469985,74468946,74467756,74465676,74463356,74462488,74462094,74459682,74457874,74456649,74451959 74607094,74532153,74508925,74503746,74496644,74494831,74493140,74491215,74485917,74483124,74480394,74477533,74474632,74472411,74471286,74470073,74469063,74467848,74465813,74463479,74462630,74462195,74459789,74457994,74456755,74453334 Gene ID= ENSG00000090863.11 TPM= 50.56 Transcript Type= protein_coding chr16 74621394 74666881 74621394 74666881 - ENST00000361070.8@RFWD3 ENST00000361070.8 protein_coding 74666786,74660932,74651920,74649132,74644541,74644362,74637856,74636346,74632523,74630781,74628452,74626343,74621394 74666881,74661451,74652122,74649202,74644735,74644453,74637970,74636577,74632673,74630957,74628666,74626554,74624071 Gene ID= ENSG00000168411.13 TPM= 9.96 Transcript Type= protein_coding chr16 74671857 74700897 74671857 74700897 - transcript3860.chr16.nic@MLKL transcript3860.chr16.nic protein_coding 74700453,74695298,74691277,74685486,74682651,74678899,74676301,74675613,74675355,74674960,74671857 74700897,74695759,74692416,74685583,74682786,74678980,74676425,74675764,74675404,74675100,74672538 Gene ID= ENSG00000168404.12 TPM= 1.81 Transcript Type= NA chr16 74671861 74700914 74671861 74700914 - ENST00000308807.11@MLKL ENST00000308807.11 protein_coding 74700453,74695298,74692342,74691277,74685486,74682651,74678899,74675613,74675355,74674960,74671861 74700914,74695759,74692416,74691463,74685583,74682786,74678980,74675764,74675404,74675100,74672538 Gene ID= ENSG00000168404.12 TPM= 10.87 Transcript Type= protein_coding chr16 74873601 74985154 74873601 74985154 - transcript3868.chr16.nnic@WDR59 transcript3868.chr16.nnic protein_coding 74984964,74965773,74951458,74949718,74948519,74942738,74939869,74938150,74923926,74921947,74917929,74916127,74915870,74912198,74909822,74909501,74908908,74903947,74893679,74892484,74889703,74888169,74887683,74886270,74885653,74873601 74985154,74965822,74951543,74949798,74948556,74942826,74939957,74938266,74924003,74922103,74918008,74916259,74915994,74912362,74909917,74909657,74908977,74904100,74893812,74892565,74889815,74888319,74887755,74886396,74885795,74874444 Gene ID= ENSG00000103091.14 TPM= 14.49 Transcript Type= NA chr16 74912115 74985154 74912115 74985154 - transcript3873.chr16.nic@WDR59 transcript3873.chr16.nic protein_coding 74984964,74965773,74956475,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74912115 74985154,74965822,74956610,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74912362 Gene ID= ENSG00000103091.14 TPM= 5.43 Transcript Type= NA chr16 74915448 74985154 74915448 74985154 - transcript3874.chr16.nic@WDR59 transcript3874.chr16.nic protein_coding 74984964,74965773,74956475,74951458,74949718,74948519,74942738,74938150,74923926,74921947,74917929,74916127,74915870,74915448 74985154,74965822,74956610,74951543,74949798,74948556,74942826,74938266,74924003,74922103,74918008,74916259,74915994,74915717 Gene ID= ENSG00000103091.14 TPM= 1.81 Transcript Type= NA chr16 74998975 75110711 74998975 75110711 + transcript3889.chr16.nnic@ZNRF1 transcript3889.chr16.nnic protein_coding 74998975,75093572,75104784,75106482,75109402 75000095,75093667,75104889,75106571,75110711 Gene ID= ENSG00000186187.11 TPM= 5.43 Transcript Type= NA chr16 74999030 75110994 74999030 75110994 + ENST00000335325.8@ZNRF1 ENST00000335325.8 protein_coding 74999030,75093572,75104784,75106482,75107733 75000095,75093667,75104889,75106571,75110994 Gene ID= ENSG00000186187.11 TPM= 52.52 Transcript Type= protein_coding chr16 74998975 75110712 74998975 75110712 + transcript3891.chr16.nic@ZNRF1 transcript3891.chr16.nic protein_coding 74998975,75093572,75104784,75107733 75000095,75093667,75106571,75110712 Gene ID= ENSG00000186187.11 TPM= 5.43 Transcript Type= NA chr16 75110522 75116809 75110522 75116809 - transcript3887.chr16.nic@LDHD transcript3887.chr16.nic protein_coding 75116649,75115548,75114827,75113966,75112602,75110522 75116809,75115660,75115339,75114685,75113870,75112521 Gene ID= ENSG00000166816.13 TPM= 2.72 Transcript Type= NA chr16 75111860 75116767 75111860 75116767 - ENST00000300051.8@LDHD ENST00000300051.8 protein_coding 75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111860 75116767,75115660,75115339,75114968,75114685,75114234,75113870,75113662,75112924,75112713,75112521 Gene ID= ENSG00000166816.13 TPM= 31.69 Transcript Type= protein_coding chr16 75111896 75116771 75111896 75116771 - ENST00000450168.2@LDHD ENST00000450168.2 protein_coding 75116649,75115548,75115198,75114827,75114526,75113966,75113742,75113535,75112834,75112602,75111896 75116771,75115660,75115339,75114968,75114685,75114165,75113870,75113662,75112924,75112713,75112521 Gene ID= ENSG00000166816.13 TPM= 42.56 Transcript Type= protein_coding chr16 75148493 75172235 75148493 75172235 + transcript3893.chr16.nic@ZFP1 transcript3893.chr16.nic protein_coding 75148493,75148901,75152909,75166770,75169253 75148643,75149267,75152966,75166896,75172235 Gene ID= ENSG00000184517.11 TPM= 5.43 Transcript Type= NA chr16 75148582 75172236 75148582 75172236 + ENST00000393430.6@ZFP1 ENST00000393430.6 protein_coding 75148582,75152909,75166770,75169253 75148662,75152966,75166896,75172236 Gene ID= ENSG00000184517.11 TPM= 2.72 Transcript Type= protein_coding chr16 75219000 75224924 75219000 75224924 + ENST00000361017.8@CTRB1 ENST00000361017.8 protein_coding 75219000,75222768,75222969,75223141,75223448,75224055,75224705 75219059,75222871,75223048,75223219,75223628,75224188,75224924 Gene ID= ENSG00000168925.10 TPM= 3.62 Transcript Type= protein_coding chr16 75229030 75251609 75229030 75251609 - ENST00000162330.9@BCAR1 ENST00000162330.9 protein_coding 75251471,75242470,75237183,75236882,75234889,75233846,75229030 75251609,75243090,75237344,75236998,75235986,75233935,75230023 Gene ID= ENSG00000050820.16 TPM= 48.49 Transcript Type= protein_coding chr16 75229037 75238660 75229037 75238660 - ENST00000566982.1@BCAR1 ENST00000566982.1 protein_coding 75238091,75237183,75236882,75234889,75233846,75229037 75238660,75237344,75236998,75235986,75233935,75230023 Gene ID= ENSG00000050820.16 TPM= 5.8 Transcript Type= processed_transcript chr16 75229103 75266007 75229103 75266007 - ENST00000538440.6@BCAR1 ENST00000538440.6 protein_coding 75265825,75242470,75237183,75236882,75234889,75233846,75229103 75266007,75243090,75237344,75236998,75235986,75233935,75230023 Gene ID= ENSG00000050820.16 TPM= 5.8 Transcript Type= protein_coding chr16 75293710 75433485 75293710 75433485 - ENST00000283882.3@CFDP1 ENST00000283882.3 protein_coding 75433289,75414578,75412535,75411825,75395090,75305024,75293710 75433485,75414695,75412754,75411952,75395209,75305182,75294042 Gene ID= ENSG00000153774.8 TPM= 49.35 Transcript Type= protein_coding chr16 75379796 75433476 75379796 75433476 - transcript3929.chr16.nnic@CFDP1 transcript3929.chr16.nnic protein_coding 75433289,75414578,75412535,75411825,75395090,75381204,75379796 75433476,75414695,75412754,75411952,75395209,75381290,75380134 Gene ID= ENSG00000153774.8 TPM= 2.72 Transcript Type= NA chr16 75293711 75433494 75293711 75433494 - transcript3930.chr16.nic@CFDP1 transcript3930.chr16.nic protein_coding 75433289,75412535,75411825,75395090,75305024,75293711 75433494,75412754,75411952,75395209,75305182,75294042 Gene ID= ENSG00000153774.8 TPM= 4.07 Transcript Type= NA chr16 75371816 75433476 75371816 75433476 - transcript3931.chr16.nic@CFDP1 transcript3931.chr16.nic protein_coding 75433289,75414578,75412535,75411825,75395090,75371816 75433476,75414695,75412754,75411952,75395209,75372568 Gene ID= ENSG00000153774.8 TPM= 1.81 Transcript Type= NA chr16 75447019 75464698 75447019 75464698 - ENST00000561878.1@TMEM170A ENST00000561878.1 protein_coding 75464468,75451669,75447019 75464698,75451839,75447688 Gene ID= ENSG00000166822.12 TPM= 3.62 Transcript Type= protein_coding chr16 75536744 75556286 75536744 75556286 - ENST00000258173.10@TMEM231 ENST00000258173.10 protein_coding 75556071,75555804,75545826,75545352,75542602,75541350,75536744 75556286,75555973,75545954,75545495,75542683,75541455,75540174 Gene ID= ENSG00000205084.10 TPM= 14.49 Transcript Type= protein_coding chr16 75538136 75556268 75538136 75556268 - ENST00000562410.5@TMEM231 ENST00000562410.5 protein_coding 75556071,75555804,75545826,75545352,75542602,75541350,75538136 75556268,75555973,75546077,75545495,75542683,75541455,75540174 Gene ID= ENSG00000205084.10 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr16 75566351 75577881 75566351 75577881 + ENST00000037243.6@GABARAPL2 ENST00000037243.6 protein_coding 75566351,75566852,75568037,75577279 75566520,75566907,75568209,75577881 Gene ID= ENSG00000034713.7 TPM= 233.63 Transcript Type= protein_coding chr16 75566389 75577881 75566389 75577881 + ENST00000563744.1@GABARAPL2 ENST00000563744.1 protein_coding 75566389,75566852,75577279 75566520,75566907,75577881 Gene ID= ENSG00000034713.7 TPM= 1.81 Transcript Type= protein_coding chr16 75599099 75623297 75599099 75623297 - transcript3956.chr16.nnic@ADAT1 transcript3956.chr16.nnic protein_coding 75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599392,75599099 75623297,75620820,75620334,75618640,75617272,75612861,75608988,75608323,75603171,75600348,75599293 Gene ID= ENSG00000065457.10 TPM= 3.17 Transcript Type= NA chr16 75599099 75623291 75599099 75623291 - transcript3959.chr16.nic@ADAT1 transcript3959.chr16.nic protein_coding 75623238,75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599099 75623291,75622464,75620820,75620334,75618698,75617272,75612861,75608988,75608323,75603171,75600348 Gene ID= ENSG00000065457.10 TPM= 4.53 Transcript Type= NA chr16 75599099 75623297 75599099 75623297 - transcript3962.chr16.nic@ADAT1 transcript3962.chr16.nic protein_coding 75622403,75620631,75620266,75618586,75617142,75612243,75608843,75608224,75603085,75599099 75623297,75620820,75620334,75618640,75617272,75612861,75608988,75608323,75603171,75600348 Gene ID= ENSG00000065457.10 TPM= 16.75 Transcript Type= NA chr16 75627726 75647677 75627726 75647677 - transcript3974.chr16.nic@KARS transcript3974.chr16.nic protein_coding 75647578,75641564,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627726 75647677,75641723,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993 Gene ID= ENSG00000065427.14 TPM= 3.62 Transcript Type= NA chr16 75627724 75647679 75627724 75647679 - ENST00000302445.7@KARS ENST00000302445.7 protein_coding 75647578,75641564,75640184,75636454,75635912,75635680,75634173,75631693,75631416,75631168,75630423,75629415,75628569,75627724 75647679,75641723,75640349,75636547,75636098,75635805,75634292,75631855,75631589,75631253,75630508,75629541,75628712,75627993 Gene ID= ENSG00000065427.14 TPM= 55.24 Transcript Type= protein_coding chr16 75647786 75657432 75647786 75657432 + ENST00000300086.4@TERF2IP ENST00000300086.4 protein_coding 75647786,75654273,75656207 75648552,75654397,75657432 Gene ID= ENSG00000166848.5 TPM= 373.99 Transcript Type= protein_coding chr16 77191196 77200928 77191196 77200928 + transcript3981.chr16.nnic@MON1B transcript3981.chr16.nnic protein_coding 77191196,77191476,77193451,77194335,77194935,77195535,77198108 77191258,77191633,77193789,77194789,77195154,77195682,77200928 Gene ID= ENSG00000103111.14 TPM= 2.72 Transcript Type= NA chr16 77190919 77202405 77190919 77202405 + ENST00000248248.7@MON1B ENST00000248248.7 protein_coding 77190919,77191476,77193451,77194335,77195535,77198108 77191258,77191633,77193777,77195154,77195682,77202405 Gene ID= ENSG00000103111.14 TPM= 50.26 Transcript Type= protein_coding chr16 77190922 77200928 77190922 77200928 + transcript3985.chr16.nic@MON1B transcript3985.chr16.nic protein_coding 77190922,77191476,77193451,77195535,77198108 77191258,77191633,77195154,77195682,77200928 Gene ID= ENSG00000103111.14 TPM= 8.15 Transcript Type= NA chr16 77191194 77200928 77191194 77200928 + transcript3986.chr16.nic@MON1B transcript3986.chr16.nic protein_coding 77191194,77193451,77194335,77195535,77198108 77191633,77193777,77195154,77195682,77200928 Gene ID= ENSG00000103111.14 TPM= 6.79 Transcript Type= NA chr16 77199397 77213005 77199397 77213005 + ENST00000378644.4@SYCE1L ENST00000378644.4 protein_coding 77199397,77206441,77208210,77208465,77209097,77209417,77211213,77212130,77212282,77212574,77212857 77199512,77206500,77208269,77208539,77209144,77209471,77211276,77212199,77212369,77212646,77213005 Gene ID= ENSG00000205078.5 TPM= 1.81 Transcript Type= protein_coding chr16 77722519 77742258 77722519 77742258 + ENST00000437314.3@NUDT7 ENST00000437314.3 protein_coding 77722519,77725431,77741582 77722617,77725584,77742258 Gene ID= ENSG00000140876.11 TPM= 17.21 Transcript Type= protein_coding chr16 77722514 77742260 77722514 77742260 + ENST00000268533.9@NUDT7 ENST00000268533.9 protein_coding 77722514,77725431,77735828,77741582 77722617,77725584,77735986,77742260 Gene ID= ENSG00000140876.11 TPM= 9.06 Transcript Type= protein_coding chr16 77788530 77980107 77788530 77980107 + ENST00000302536.2@VAT1L ENST00000302536.2 protein_coding 77788530,77816921,77825246,77862748,77876370,77879169,77884608,77971850,77977597 77788915,77817050,77825461,77862890,77876473,77879224,77884802,77971933,77980107 Gene ID= ENSG00000171724.2 TPM= 60.67 Transcript Type= protein_coding chr16 79593838 79600714 79593838 79600714 - ENST00000326043.4@MAF ENST00000326043.4 protein_coding 79598785,79593838 79600714,79594553 Gene ID= ENSG00000178573.6 TPM= 9.06 Transcript Type= protein_coding chr16 79721312 79770532 79721312 79770532 - ENST00000567993.5@MAFTRR ENST00000567993.5 lincRNA 79770447,79769153,79757651,79751214,79740147,79721312 79770532,79769222,79757715,79751276,79740237,79721621 Gene ID= ENSG00000261390.5 TPM= 1.81 Transcript Type= lincRNA chr16 80540957 80550644 80540957 80550644 + ENST00000305904.10@DYNLRB2 ENST00000305904.10 protein_coding 80540957,80543276,80549484,80550515 80541079,80543351,80549651,80550644 Gene ID= ENSG00000168589.14 TPM= 1.81 Transcript Type= protein_coding chr16 80975800 81006910 80975800 81006910 - transcript4022.chr16.nic@CMC2 transcript4022.chr16.nic protein_coding 81006734,80997314,80981806,80980770,80975800 81006910,80997429,80981877,80980879,80976179 Gene ID= ENSG00000103121.8 TPM= 9.96 Transcript Type= NA chr16 80966448 81007114 80966448 81007114 - ENST00000219400.7@CMC2 ENST00000219400.7 protein_coding 81006734,80997314,80981806,80966448 81007114,80997429,80981877,80976179 Gene ID= ENSG00000103121.8 TPM= 33.51 Transcript Type= protein_coding chr16 80975804 81006897 80975804 81006897 - ENST00000569187.5@CMC2 ENST00000569187.5 protein_coding 81006734,80981806,80975804 81006897,80981877,80976179 Gene ID= ENSG00000103121.8 TPM= 1.81 Transcript Type= processed_transcript chr16 81035818 81047353 81035818 81047353 + transcript4031.chr16.nnic@ATMIN transcript4031.chr16.nnic protein_coding 81035818,81035964,81041356,81042281,81043161 81035873,81036206,81041481,81042480,81047353 Gene ID= ENSG00000166454.9 TPM= 5.96 Transcript Type= NA chr16 81035809 81047349 81035809 81047349 + transcript4034.chr16.nic@ATMIN transcript4034.chr16.nic protein_coding 81035809,81041356,81043161 81036206,81041481,81047349 Gene ID= ENSG00000166454.9 TPM= 2.94 Transcript Type= NA chr16 81035847 81047358 81035847 81047358 + ENST00000299575.4@ATMIN ENST00000299575.4 protein_coding 81035847,81041356,81042281,81043161 81036206,81041481,81042480,81047358 Gene ID= ENSG00000166454.9 TPM= 61.2 Transcript Type= protein_coding chr16 81081938 81096425 81081938 81096425 - ENST00000315467.8@GCSH ENST00000315467.8 protein_coding 81096131,81090601,81087601,81084463,81081938 81096425,81090680,81087664,81084594,81082963 Gene ID= ENSG00000140905.10 TPM= 46.18 Transcript Type= protein_coding chr16 81779258 81962693 81779258 81962693 + ENST00000564138.5@PLCG2 ENST00000564138.5 protein_coding 81779258,81785943,81854444,81858263,81859116,81869214,81870852,81880910,81883269,81889172,81891472,81893709,81895807,81900612,81905403,81907685,81908416,81910520,81912597,81919484,81921198,81923485,81927082,81928558,81931497,81934429,81936169,81937758,81938801,81939892,81946175,81956695,81957956 81779424,81786182,81854587,81858356,81859163,81869298,81870935,81880953,81883341,81889273,81891590,81893794,81895927,81900780,81905507,81907774,81908591,81910720,81912716,81919664,81921269,81923594,81927178,81928624,81931654,81934531,81936378,81937903,81938915,81940059,81946263,81956879,81962693 Gene ID= ENSG00000197943.9 TPM= 7.24 Transcript Type= protein_coding chr16 82148162 82170226 82148162 82170226 - ENST00000258169.8@MPHOSPH6 ENST00000258169.8 protein_coding 82170125,82164082,82151424,82149309,82148162 82170226,82164194,82151514,82149403,82148863 Gene ID= ENSG00000135698.9 TPM= 25.36 Transcript Type= protein_coding chr16 82163876 82170197 82163876 82170197 - ENST00000569021.1@MPHOSPH6 ENST00000569021.1 protein_coding 82170125,82163876 82170197,82164194 Gene ID= ENSG00000135698.9 TPM= 5.43 Transcript Type= protein_coding chr16 83807967 83812991 83807967 83812991 + transcript4053.chr16.nnic@HSBP1 transcript4053.chr16.nnic protein_coding 83807967,83808680,83809305,83811581 83808121,83808746,83809366,83812991 Gene ID= ENSG00000230989.6 TPM= 12.68 Transcript Type= NA chr16 83807843 83819737 83807843 83819737 + ENST00000433866.6@HSBP1 ENST00000433866.6 protein_coding 83807843,83808680,83809305,83811421 83808121,83808746,83809425,83819737 Gene ID= ENSG00000230989.6 TPM= 272.57 Transcript Type= protein_coding chr16 83899076 83916188 83899076 83916188 + transcript4069.chr16.nnic@MLYCD transcript4069.chr16.nnic protein_coding 83899076,83906987,83908114,83912218,83914956 83899672,83907099,83908282,83912367,83916188 Gene ID= ENSG00000103150.5 TPM= 6.34 Transcript Type= NA chr16 83899126 83927026 83899126 83927026 + ENST00000262430.5@MLYCD ENST00000262430.5 protein_coding 83899126,83906987,83908126,83912218,83914956 83899672,83907099,83908282,83912367,83927026 Gene ID= ENSG00000103150.5 TPM= 168.43 Transcript Type= protein_coding chr16 83953222 83966332 83953222 83966332 + ENST00000393306.5@OSGIN1 ENST00000393306.5 protein_coding 83953222,83957640,83959260,83960569,83960981,83965062 83953370,83957738,83959396,83960760,83961072,83966332 Gene ID= ENSG00000140961.12 TPM= 95.99 Transcript Type= protein_coding chr16 84053766 84116906 84053766 84116906 - ENST00000343411.7@MBTPS1 ENST00000343411.7 protein_coding 84116735,84101621,84099053,84095602,84093711,84093188,84091732,84090875,84087358,84084983,84081747,84074597,84070588,84069866,84068339,84067667,84066489,84065690,84063305,84060682,84059302,84056005,84053766 84116906,84102107,84099310,84095805,84093821,84093297,84091848,84090942,84087460,84085134,84081908,84074741,84070776,84070038,84068454,84067823,84066613,84065767,84063445,84060813,84059428,84056135,84054645 Gene ID= ENSG00000140943.16 TPM= 142.17 Transcript Type= protein_coding chr16 84122281 84145188 84122281 84145188 - ENST00000219439.8@HSDL1 ENST00000219439.8 protein_coding 84145080,84135544,84131102,84129986,84129548,84122281 84145188,84135605,84131327,84130431,84129775,84124728 Gene ID= ENSG00000103160.11 TPM= 15.39 Transcript Type= protein_coding chr16 84177854 84187056 84177854 84187056 - transcript4094.chr16.nic@TAF1C transcript4094.chr16.nic protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177854 84187056,84184989,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 11.29 Transcript Type= NA chr16 84177854 84187071 84177854 84187071 - transcript4103.chr16.nic@TAF1C transcript4103.chr16.nic protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84181043,84180170,84179946,84177854 84187071,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180344,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 4.05 Transcript Type= NA chr16 84177854 84187071 84177854 84187071 - transcript4107.chr16.nic@TAF1C transcript4107.chr16.nic protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84181942,84181746,84181328,84181043,84180170,84179946,84177854 84187071,84185060,84183778,84183507,84183333,84183149,84182440,84181863,84181663,84181186,84180344,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 4.05 Transcript Type= NA chr16 84177854 84187056 84177854 84187056 - transcript4111.chr16.nic@TAF1C transcript4111.chr16.nic protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84180170,84179946,84177854 84187056,84184989,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 2.65 Transcript Type= NA chr16 84177854 84187071 84177854 84187071 - transcript4115.chr16.nic@TAF1C transcript4115.chr16.nic protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84181746,84181328,84181043,84180170,84179946,84177854 84187071,84185060,84183778,84183507,84183333,84183149,84182440,84181663,84181186,84180344,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 3.14 Transcript Type= NA chr16 84177854 84187052 84177854 84187052 - ENST00000564208.5@TAF1C ENST00000564208.5 protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84181043,84180170,84179946,84177854 84187052,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180344,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 8.58 Transcript Type= retained_intron chr16 84177852 84187049 84177852 84187049 - ENST00000341690.10@TAF1C ENST00000341690.10 protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84177852 84187049,84184899,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180080,84179851 Gene ID= ENSG00000103168.16 TPM= 6.92 Transcript Type= protein_coding chr16 84177854 84187020 84177854 84187020 - ENST00000564774.5@TAF1C ENST00000564774.5 protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181328,84180170,84179946,84177854 84187020,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181186,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 1.75 Transcript Type= retained_intron chr16 84178712 84187039 84178712 84187039 - ENST00000566732.5@TAF1C ENST00000566732.5 protein_coding 84186901,84184851,84183697,84183410,84183244,84183076,84182202,84181942,84181746,84181592,84181328,84181043,84180170,84179946,84178712 84187039,84185060,84183778,84183507,84183333,84183149,84182440,84182058,84181863,84181663,84181463,84181186,84180344,84180083,84179851 Gene ID= ENSG00000103168.16 TPM= 1.03 Transcript Type= protein_coding chr16 84294646 84329851 84294646 84329851 + ENST00000219454.9@WFDC1 ENST00000219454.9 protein_coding 84294646,84312961,84318272,84319431,84324419,84326882,84329322 84295115,84313153,84318355,84319571,84324460,84326955,84329851 Gene ID= ENSG00000103175.10 TPM= 47.99 Transcript Type= protein_coding chr16 84294880 84329851 84294880 84329851 + transcript4124.chr16.nnic@WFDC1 transcript4124.chr16.nnic protein_coding 84294880,84312961,84319431,84324419,84326882,84329322 84295115,84313153,84319571,84324460,84326955,84329851 Gene ID= ENSG00000103175.10 TPM= 4.53 Transcript Type= NA chr16 84294846 84329840 84294846 84329840 + ENST00000568638.1@WFDC1 ENST00000568638.1 protein_coding 84294846,84312961,84318272,84319431,84324419,84326882,84329326 84295115,84313153,84318355,84319571,84324460,84326955,84329840 Gene ID= ENSG00000103175.10 TPM= 2.72 Transcript Type= protein_coding chr16 84478031 84504680 84478031 84504680 - transcript4130.chr16.nnic@TLDC1 transcript4130.chr16.nnic protein_coding 84504601,84497934,84495683,84489278,84486631,84482592,84480529,84479486,84478031 84504680,84498111,84495913,84489422,84487059,84482710,84480708,84480026,84479390 Gene ID= ENSG00000140950.15 TPM= 2.72 Transcript Type= NA chr16 84565600 84618128 84565600 84618128 - transcript4138.chr16.nic@COTL1 transcript4138.chr16.nic protein_coding 84617501,84590105,84565600 84618128,84590262,84566955 Gene ID= ENSG00000103187.7 TPM= 19.02 Transcript Type= NA chr16 84565594 84618077 84565594 84618077 - ENST00000262428.4@COTL1 ENST00000262428.4 protein_coding 84617838,84617501,84590105,84565594 84618077,84617583,84590262,84566955 Gene ID= ENSG00000103187.7 TPM= 202.84 Transcript Type= protein_coding chr16 84648525 84662314 84648525 84662314 + ENST00000564996.5@KLHL36 ENST00000564996.5 protein_coding 84648525,84650852,84656871,84659760,84661578 84648649,84650930,84657944,84659917,84662314 Gene ID= ENSG00000135686.12 TPM= 22.64 Transcript Type= protein_coding chr16 84699973 84779919 84699973 84779919 + transcript4147.chr16.nic@USP10 transcript4147.chr16.nic protein_coding 84699973,84733435,84740309,84744633,84758716,84759363,84759891,84760172,84762989,84764086,84768193,84772541,84778895 84700111,84733503,84740369,84745673,84758807,84759472,84759946,84760275,84763088,84764263,84768358,84772685,84779919 Gene ID= ENSG00000103194.15 TPM= 2.72 Transcript Type= NA chr16 84819984 84909510 84819984 84909510 + ENST00000262424.9@CRISPLD2 ENST00000262424.9 protein_coding 84819984,84838422,84845786,84849385,84850568,84854729,84866897,84868851,84872442,84872992,84873920,84877438,84880509,84889230,84906588 84820133,84838735,84845904,84849517,84850683,84854829,84867040,84868911,84872508,84873122,84873963,84877510,84880584,84889363,84909510 Gene ID= ENSG00000103196.11 TPM= 50.71 Transcript Type= protein_coding chr16 84974181 85011535 84974181 85011535 - ENST00000313732.8@ZDHHC7 ENST00000313732.8 protein_coding 85011286,84995922,84990304,84981870,84979189,84977924,84977095,84974181 85011535,84996007,84990635,84981994,84979285,84978005,84977225,84976519 Gene ID= ENSG00000153786.12 TPM= 79.81 Transcript Type= protein_coding chr16 84974462 85011537 84974462 85011537 - transcript4165.chr16.nnic@ZDHHC7 transcript4165.chr16.nnic protein_coding 85011286,84995922,84990304,84981870,84979189,84977924,84977095,84974462 85011537,84996007,84990635,84981994,84979322,84978005,84977225,84976519 Gene ID= ENSG00000153786.12 TPM= 4.35 Transcript Type= NA chr16 85027751 85094220 85027751 85094220 + ENST00000538274.5@KIAA0513 ENST00000538274.5 protein_coding 85027751,85066900,85071783,85072925,85075844,85077425,85078415,85078925,85081315,85086644,85087072,85088276 85027858,85067400,85071882,85072998,85075914,85077632,85078455,85079003,85081392,85086724,85087166,85094220 Gene ID= ENSG00000135709.12 TPM= 10.87 Transcript Type= protein_coding chr16 85637001 85641779 85637001 85641779 - transcript4184.chr16.nnic@NA transcript4184.chr16.nnic NA 85638786,85638403,85638086,85637001 85641779,85638576,85638252,85637743 Gene ID= novel_gene_chr16_4185 TPM= 2.72 Transcript Type= NA chr16 85676198 85688999 85676198 85688999 - ENST00000253462.7@GINS2 ENST00000253462.7 protein_coding 85688809,85687460,85681582,85678540,85676198 85688999,85687574,85681681,85678666,85678337 Gene ID= ENSG00000131153.8 TPM= 1.81 Transcript Type= protein_coding chr16 85778624 85799608 85778624 85799608 - ENST00000435200.2@EMC8 ENST00000435200.2 protein_coding 85799065,85788974,85781211,85778624 85799608,85789050,85781280,85779867 Gene ID= ENSG00000131148.8 TPM= 15.85 Transcript Type= protein_coding chr16 85778624 85799540 85778624 85799540 - ENST00000253457.7@EMC8 ENST00000253457.7 protein_coding 85799065,85788974,85781211,85780379,85778624 85799540,85789050,85781280,85780473,85779867 Gene ID= ENSG00000131148.8 TPM= 58.41 Transcript Type= protein_coding chr16 85799693 85807044 85799693 85807044 + ENST00000562336.5@COX4I1 ENST00000562336.5 protein_coding 85799693,85801205,85804937,85805733,85806738 85799884,85801278,85805104,85805864,85807044 Gene ID= ENSG00000131143.8 TPM= 8.45 Transcript Type= protein_coding chr16 85799697 85807002 85799697 85807002 + ENST00000561569.5@COX4I1 ENST00000561569.5 protein_coding 85799697,85801184,85804937,85805733,85806738 85799752,85801278,85805104,85805864,85807002 Gene ID= ENSG00000131143.8 TPM= 12.98 Transcript Type= protein_coding chr16 85898803 85922609 85898803 85922609 + ENST00000268638.9@IRF8 ENST00000268638.9 protein_coding 85898803,85903015,85908990,85911570,85913131,85914473,85918417,85920109,85921106 85899223,85903189,85909173,85911658,85913236,85914520,85918803,85920224,85922609 Gene ID= ENSG00000140968.10 TPM= 73.35 Transcript Type= protein_coding chr16 86530177 86555213 86530177 86555213 - transcript4210.chr16.nic@MTHFSD transcript4210.chr16.nic protein_coding 86555169,86554645,86552179,86548464,86548035,86546559,86542101,86541697,86530177 86555213,86554748,86552292,86548577,86548111,86546649,86542213,86541822,86532481 Gene ID= ENSG00000103248.18 TPM= 3.47 Transcript Type= NA chr16 86530176 86555210 86530176 86555210 - ENST00000360900.10@MTHFSD ENST00000360900.10 protein_coding 86555169,86554645,86552033,86548464,86546559,86542101,86541697,86530176 86555210,86554751,86552146,86548577,86546649,86542213,86541822,86532481 Gene ID= ENSG00000103248.18 TPM= 10.71 Transcript Type= protein_coding chr16 86530833 86555235 86530833 86555235 - ENST00000546093.5@MTHFSD ENST00000546093.5 protein_coding 86555173,86554645,86552179,86548464,86548035,86546559,86542101,86541697,86530833 86555235,86554748,86552292,86548577,86548111,86546649,86542213,86541822,86532481 Gene ID= ENSG00000103248.18 TPM= 1.2 Transcript Type= protein_coding chr16 87302801 87317420 87302801 87317420 - ENST00000618367.4@C16orf95 ENST00000618367.4 protein_coding 87317087,87315772,87314971,87305719,87302801 87317420,87315823,87315096,87305905,87303075 Gene ID= ENSG00000260456.6 TPM= 3.62 Transcript Type= protein_coding chr16 87302814 87317416 87302814 87317416 - ENST00000253461.8@C16orf95 ENST00000253461.8 protein_coding 87317091,87315772,87314971,87305719,87302814 87317416,87315823,87315096,87305905,87303075 Gene ID= ENSG00000260456.6 TPM= 2.72 Transcript Type= protein_coding chr16 87326987 87383822 87326987 87383822 - transcript4222.chr16.nic@FBXO31 transcript4222.chr16.nic protein_coding 87383405,87360295,87358411,87347174,87343598,87342877,87336155,87335304,87333886,87326987 87383822,87360366,87358497,87347250,87343765,87342951,87336264,87335457,87334286,87331510 Gene ID= ENSG00000103264.17 TPM= 8.24 Transcript Type= NA chr16 87326987 87381483 87326987 87381483 - transcript4227.chr16.nnic@FBXO31 transcript4227.chr16.nnic protein_coding 87381409,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87326987 87381483,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510 Gene ID= ENSG00000103264.17 TPM= 10.96 Transcript Type= NA chr16 87326987 87383822 87326987 87383822 - transcript4230.chr16.nnic@FBXO31 transcript4230.chr16.nnic protein_coding 87383405,87360295,87347174,87343598,87342877,87336155,87335304,87334167,87326987 87383822,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510 Gene ID= ENSG00000103264.17 TPM= 6.88 Transcript Type= NA chr16 87326987 87383757 87326987 87383757 - ENST00000311635.11@FBXO31 ENST00000311635.11 protein_coding 87383405,87360295,87347174,87343598,87342877,87336155,87335304,87333886,87326987 87383757,87360366,87347250,87343765,87342951,87336264,87335457,87334286,87331510 Gene ID= ENSG00000103264.17 TPM= 140.45 Transcript Type= protein_coding chr16 87406257 87491859 87406257 87491859 - ENST00000568020.5@ZCCHC14 ENST00000568020.5 protein_coding 87491669,87460008,87433128,87423810,87420607,87419783,87418847,87417460,87415276,87414414,87413055,87411516,87407678,87406257 87491859,87460131,87433201,87423881,87420716,87419877,87418901,87417742,87415367,87414541,87413195,87412976,87410335,87407014 Gene ID= ENSG00000140948.11 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr16 87406246 87492045 87406246 87492045 - ENST00000268616.8@ZCCHC14 ENST00000268616.8 protein_coding 87491669,87460008,87433128,87423810,87420607,87419783,87418847,87417460,87415276,87414414,87413055,87411516,87406246 87492045,87460131,87433201,87423881,87420716,87419877,87418901,87417742,87415367,87414541,87413195,87412976,87410335 Gene ID= ENSG00000140948.11 TPM= 5.89 Transcript Type= protein_coding chr16 87707813 87765949 87707813 87765949 - ENST00000270583.9@KLHDC4 ENST00000270583.9 protein_coding 87765792,87761949,87756399,87755194,87748673,87730552,87726765,87714498,87711235,87709265,87708350,87707813 87765949,87762040,87756477,87755292,87748809,87730644,87726924,87714573,87711443,87709667,87708466,87708075 Gene ID= ENSG00000104731.13 TPM= 13.58 Transcript Type= protein_coding chr16 87951461 88077320 87951461 88077320 + transcript4255.chr16.nic@BANP transcript4255.chr16.nic protein_coding 87951461,87975048,87981036,87984060,88004295,88006090,88018428,88027483,88033109,88035323,88037973,88065267,88072069,88076590 87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077320 Gene ID= ENSG00000172530.20 TPM= 4.65 Transcript Type= NA chr16 87951434 88077320 87951434 88077320 + transcript4262.chr16.nic@BANP transcript4262.chr16.nic protein_coding 87951434,87975048,87981036,87984060,88004295,88006090,88018428,88027483,88033109,88035332,88037973,88072069,88076590 87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077320 Gene ID= ENSG00000172530.20 TPM= 1.94 Transcript Type= NA chr16 87951436 88077320 87951436 88077320 + transcript4270.chr16.nic@BANP transcript4270.chr16.nic protein_coding 87951436,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035332,88037973,88072069,88076590 87951515,87975207,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077320 Gene ID= ENSG00000172530.20 TPM= 1.94 Transcript Type= NA chr16 87951434 88077318 87951434 88077318 + ENST00000393208.6@BANP ENST00000393208.6 protein_coding 87951434,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88065267,88072069,88076590 87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077318 Gene ID= ENSG00000172530.20 TPM= 2.84 Transcript Type= protein_coding chr16 87951487 88077318 87951487 88077318 + ENST00000355022.8@BANP ENST00000355022.8 protein_coding 87951487,87975048,87981036,87984060,88006090,88018428,88027483,88033109,88035323,88037973,88072069,88076590 87951515,87975185,87981127,87984259,88006265,88018667,88027650,88033245,88035394,88038011,88072212,88077318 Gene ID= ENSG00000172530.20 TPM= 7.37 Transcript Type= protein_coding chr16 87951432 88077317 87951432 88077317 + ENST00000286122.11@BANP ENST00000286122.11 protein_coding 87951432,87975048,87981036,87984084,88004295,88006090,88018428,88027483,88033109,88035332,88037973,88065267,88072069,88076590 87951515,87975185,87981127,87984259,88004411,88006265,88018667,88027650,88033245,88035394,88038011,88065332,88072212,88077317 Gene ID= ENSG00000172530.20 TPM= 4.65 Transcript Type= protein_coding chr16 88453317 88537016 88453317 88537016 + ENST00000319555.7@ZFPM1 ENST00000319555.7 protein_coding 88453317,88485939,88489031,88514387,88526814,88528032,88532002,88532614,88532789,88533148 88453678,88486043,88489153,88514520,88526916,88528238,88532235,88532709,88532935,88537016 Gene ID= ENSG00000179588.8 TPM= 15.39 Transcript Type= protein_coding chr16 88570381 88631966 88570381 88631966 + ENST00000301011.9@ZC3H18 ENST00000301011.9 protein_coding 88570381,88577110,88586600,88598178,88598620,88599791,88608934,88611268,88622197,88623219,88623958,88624602,88625202,88627622,88627920,88628758,88630485,88631101 88570566,88577726,88586684,88598326,88598712,88599948,88609051,88611536,88622388,88623344,88624062,88624745,88625267,88627782,88628119,88628854,88630581,88631966 Gene ID= ENSG00000158545.15 TPM= 35.32 Transcript Type= protein_coding chr16 88643283 88651152 88643283 88651152 - ENST00000261623.7@CYBA ENST00000261623.7 protein_coding 88650956,88648045,88647101,88646755,88646116,88643283 88651152,88648114,88647175,88646838,88646197,88643571 Gene ID= ENSG00000051523.10 TPM= 155.75 Transcript Type= protein_coding chr16 88651933 88663144 88651933 88663144 - transcript4293.chr16.nic@MVD transcript4293.chr16.nic protein_coding 88663011,88660748,88660520,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651933 88663144,88660841,88660637,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605 Gene ID= ENSG00000167508.11 TPM= 6.79 Transcript Type= NA chr16 88662102 88663161 88662102 88663161 - ENST00000562741.1@MVD ENST00000562741.1 protein_coding 88663011,88662102 88663161,88662167 Gene ID= ENSG00000167508.11 TPM= 3.62 Transcript Type= processed_transcript chr16 88651935 88663110 88651935 88663110 - ENST00000301012.7@MVD ENST00000301012.7 protein_coding 88663011,88658650,88657915,88657436,88656105,88655656,88655199,88654692,88653300,88651935 88663110,88658720,88658029,88657582,88656304,88655730,88655417,88654807,88653408,88652605 Gene ID= ENSG00000167508.11 TPM= 55.69 Transcript Type= protein_coding chr16 88663339 88679761 88663339 88679761 + transcript4300.chr16.nnic@SNAI3-AS1 transcript4300.chr16.nnic antisense_RNA 88663339,88671277,88671813,88673604,88675539 88663400,88671465,88672122,88673759,88679761 Gene ID= ENSG00000260630.6 TPM= 1.81 Transcript Type= NA chr16 88696495 88706421 88696495 88706421 - ENST00000312838.8@RNF166 ENST00000312838.8 protein_coding 88706171,88701262,88699620,88698971,88698502,88696495 88706421,88701418,88699732,88699085,88698609,88697633 Gene ID= ENSG00000158717.10 TPM= 35.77 Transcript Type= protein_coding chr16 88696502 88706424 88696502 88706424 - transcript4317.chr16.nic@RNF166 transcript4317.chr16.nic protein_coding 88699620,88698971,88698502,88696502 88706424,88699085,88698609,88697633 Gene ID= ENSG00000158717.10 TPM= 5.89 Transcript Type= NA chr16 88706463 88715386 88706463 88715386 + ENST00000453996.6@CTU2 ENST00000453996.6 protein_coding 88706463,88707136,88709938,88710223,88711635,88712274,88712622,88713312,88713647,88714136,88714383,88714587,88714860,88715048,88715182 88706598,88707210,88710016,88710282,88711695,88712383,88712905,88713447,88713778,88714227,88714486,88714737,88714926,88715106,88715386 Gene ID= ENSG00000174177.12 TPM= 19.92 Transcript Type= protein_coding chr16 88715346 88785211 88715346 88785211 - ENST00000301015.13@PIEZO1 ENST00000301015.13 protein_coding 88784901,88749384,88742300,88742053,88741478,88738568,88738227,88737934,88737728,88737559,88736639,88736148,88735135,88734875,88734650,88734356,88733906,88733588,88733278,88732607,88732335,88731706,88727557,88727039,88726715,88726547,88726284,88725595,88725416,88725009,88723871,88723226,88723095,88722837,88722583,88722218,88721808,88721538,88721166,88720616,88720385,88720069,88719802,88719574,88717023,88716806,88716559,88716361,88716198,88715933,88715346 88785211,88749479,88742422,88742095,88741616,88738736,88738440,88738105,88737814,88737646,88736739,88736408,88735246,88735053,88734798,88734538,88734054,88733745,88733454,88732732,88732535,88731910,88727661,88727192,88726958,88726643,88726455,88725684,88725519,88725080,88723971,88723328,88723151,88723009,88722689,88722397,88722066,88721726,88721430,88720748,88720532,88720283,88719960,88719721,88717211,88716898,88716731,88716483,88716277,88716119,88715854 Gene ID= ENSG00000103335.21 TPM= 23.54 Transcript Type= protein_coding chr16 88809469 88811928 88809469 88811928 - ENST00000567391.5@APRT ENST00000567391.5 protein_coding 88811820,88811550,88810070,88809469 88811928,88811656,88810148,88809840 Gene ID= ENSG00000198931.10 TPM= 2.04 Transcript Type= nonsense_mediated_decay chr16 88809469 88811925 88809469 88811925 - ENST00000426324.6@APRT ENST00000426324.6 protein_coding 88811820,88811550,88810423,88810070,88809469 88811925,88811656,88810556,88810148,88809706 Gene ID= ENSG00000198931.10 TPM= 40.75 Transcript Type= protein_coding chr16 88809469 88811937 88809469 88811937 - ENST00000568319.5@APRT ENST00000568319.5 protein_coding 88811820,88811550,88810070,88809469 88811937,88811656,88810148,88809706 Gene ID= ENSG00000198931.10 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr16 88813729 88856966 88813729 88856966 - transcript4324.chr16.nic@GALNS transcript4324.chr16.nic protein_coding 88856758,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813729 88856966,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88814525 Gene ID= ENSG00000141012.12 TPM= 7.24 Transcript Type= NA chr16 88855129 88857832 88855129 88857832 - transcript4353.chr16.nnic@GALNS transcript4353.chr16.nnic protein_coding 88856758,88856191,88855129 88857832,88856301,88855522 Gene ID= ENSG00000141012.12 TPM= 2.72 Transcript Type= NA chr16 88813734 88856966 88813734 88856966 - ENST00000268695.9@GALNS ENST00000268695.9 protein_coding 88856758,88842706,88841897,88840992,88837622,88836201,88835725,88835213,88831998,88826702,88824767,88822589,88818007,88813734 88856966,88842829,88841971,88841094,88837765,88836267,88835849,88835352,88832101,88826838,88824869,88822710,88818124,88814525 Gene ID= ENSG00000141012.12 TPM= 76.07 Transcript Type= protein_coding chr16 88855128 88856970 88855128 88856970 - ENST00000568311.1@GALNS ENST00000568311.1 protein_coding 88856758,88856207,88855128 88856970,88856301,88855522 Gene ID= ENSG00000141012.12 TPM= 1.81 Transcript Type= protein_coding chr16 88857104 88862681 88857104 88862681 + transcript4328.chr16.nic@TRAPPC2L transcript4328.chr16.nic protein_coding 88857104,88858619,88859345,88859573,88859893,88860911 88857183,88858789,88859443,88859750,88859972,88862681 Gene ID= ENSG00000167515.10 TPM= 6.37 Transcript Type= NA chr16 88857044 88862681 88857044 88862681 + transcript4338.chr16.nic@TRAPPC2L transcript4338.chr16.nic protein_coding 88857044,88858619,88859345,88859893,88860911 88857183,88858789,88859750,88859972,88862681 Gene ID= ENSG00000167515.10 TPM= 8.62 Transcript Type= NA chr16 88857044 88862685 88857044 88862685 + transcript4342.chr16.nic@TRAPPC2L transcript4342.chr16.nic protein_coding 88857044,88858619,88859663,88859893,88860914 88857183,88858791,88859750,88859972,88862685 Gene ID= ENSG00000167515.10 TPM= 111.8 Transcript Type= NA chr16 88857086 88862686 88857086 88862686 + ENST00000301021.7@TRAPPC2L ENST00000301021.7 protein_coding 88857086,88858619,88859663,88859893,88860911 88857183,88858791,88859750,88859972,88862686 Gene ID= ENSG00000167515.10 TPM= 54.81 Transcript Type= protein_coding chr16 88863336 88869709 88863336 88869709 - transcript4356.chr16.nnic@PABPN1L transcript4356.chr16.nnic protein_coding 88869352,88868935,88866352,88865806,88865563,88865022,88864853,88864237,88863336 88869709,88869070,88866978,88865941,88865630,88865128,88864940,88864379,88863795 Gene ID= ENSG00000205022.9 TPM= 1.81 Transcript Type= NA chr16 88863336 88869841 88863336 88869841 - transcript4359.chr16.nnic@PABPN1L transcript4359.chr16.nnic protein_coding 88869352,88868935,88866352,88865806,88865563,88865022,88864237,88863336 88869841,88869070,88866978,88865941,88865630,88865128,88864379,88863795 Gene ID= ENSG00000205022.9 TPM= 2.72 Transcript Type= NA chr16 88875280 88941357 88875280 88941357 - transcript4361.chr16.nic@CBFA2T3 transcript4361.chr16.nic protein_coding 88941020,88901504,88898078,88892244,88891882,88885961,88885046,88882676,88881291,88880720,88879270,88875280 88941357,88901656,88898152,88892485,88891971,88886142,88885269,88882761,88881489,88880788,88879460,88877275 Gene ID= ENSG00000129993.14 TPM= 2.72 Transcript Type= NA chr16 89093834 89151582 89093834 89151582 + transcript4382.chr16.nic@ACSF3 transcript4382.chr16.nic protein_coding 89093834,89098591,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89151028 89093996,89098763,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89151582 Gene ID= ENSG00000176715.15 TPM= 5.43 Transcript Type= NA chr16 89093883 89154589 89093883 89154589 + ENST00000406948.7@ACSF3 ENST00000406948.7 protein_coding 89093883,89100662,89102604,89112092,89114339,89120801,89133136,89145267,89145938,89154090 89093996,89101347,89102759,89112246,89114487,89120913,89133262,89145401,89146049,89154589 Gene ID= ENSG00000176715.15 TPM= 29.88 Transcript Type= protein_coding chr16 89217695 89232635 89217695 89232635 + transcript4393.chr16.nic@ZNF778 transcript4393.chr16.nic protein_coding 89217695,89220997,89222092,89224719,89225555,89226694 89217910,89221152,89222183,89224802,89225631,89232635 Gene ID= ENSG00000170100.13 TPM= 2.72 Transcript Type= NA chr16 89286657 89490607 89286657 89490607 - transcript4398.chr16.nic@ANKRD11 transcript4398.chr16.nic protein_coding 89490245,89418284,89316933,89305206,89291681,89291013,89290625,89286657 89490607,89418368,89317075,89305344,89291777,89291183,89290828,89288670 Gene ID= ENSG00000167522.14 TPM= 2.84 Transcript Type= NA chr16 89286657 89490607 89286657 89490607 - transcript4404.chr16.nic@ANKRD11 transcript4404.chr16.nic protein_coding 89490245,89418284,89316933,89305206,89291013,89290625,89286657 89490607,89418368,89317075,89305344,89291183,89290828,89288670 Gene ID= ENSG00000167522.14 TPM= 2.84 Transcript Type= NA chr16 89267627 89490318 89267627 89490318 - ENST00000378330.6@ANKRD11 ENST00000378330.6 protein_coding 89490245,89431256,89418284,89316933,89305206,89291013,89290625,89288528,89286039,89279072,89275093,89274814,89270817,89267627 89490318,89431326,89418368,89317078,89305344,89291183,89290828,89288670,89286186,89285649,89275191,89274957,89270909,89268663 Gene ID= ENSG00000167522.14 TPM= 9.06 Transcript Type= protein_coding chr16 89298863 89490607 89298863 89490607 - transcript4416.chr16.nic@ANKRD11 transcript4416.chr16.nic protein_coding 89490245,89418284,89316933,89305206,89298863 89490607,89418368,89317075,89305344,89300962 Gene ID= ENSG00000167522.14 TPM= 14.62 Transcript Type= NA chr16 89320556 89324922 89320556 89324922 + transcript4420.chr16.nic@AC137932.2 transcript4420.chr16.nic processed_transcript 89320556,89323099,89323766,89324236 89321227,89323333,89323920,89324922 Gene ID= ENSG00000261253.2 TPM= 1.81 Transcript Type= NA chr16 89492404 89508321 89492404 89508321 - transcript4423.chr16.nnic@AC092123.1 transcript4423.chr16.nnic antisense_RNA 89508237,89505045,89504207,89492404 89508321,89505153,89504311,89492633 Gene ID= ENSG00000261118.1 TPM= 1.81 Transcript Type= NA chr16 89508403 89557766 89508403 89557766 + ENST00000268704.6@SPG7 ENST00000268704.6 protein_coding 89508403,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89544648,89546658,89548003,89550494,89552979,89553794,89554486,89556887 89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89544772,89546760,89548113,89550609,89553135,89553960,89554563,89557766 Gene ID= ENSG00000197912.14 TPM= 209.84 Transcript Type= protein_coding chr16 89508411 89537721 89508411 89537721 + ENST00000341316.6@SPG7 ENST00000341316.6 protein_coding 89508411,89510490,89512948,89524006,89526329,89529477,89530683,89531904,89532463,89536765 89508600,89510592,89513037,89524247,89526468,89529579,89530808,89532066,89532636,89537721 Gene ID= ENSG00000197912.14 TPM= 27.17 Transcript Type= protein_coding chr16 89560657 89566828 89560657 89566828 + ENST00000311528.9@RPL13 ENST00000311528.9 protein_coding 89560657,89560940,89561227,89561578,89562335,89562884 89560712,89561063,89561368,89561751,89562391,89566828 Gene ID= ENSG00000167526.13 TPM= 1153.06 Transcript Type= protein_coding chr16 89560681 89563080 89560681 89563080 + ENST00000567815.5@RPL13 ENST00000567815.5 protein_coding 89560681,89560954,89561227,89561578,89562335,89562884 89560712,89561063,89561368,89561751,89562391,89563080 Gene ID= ENSG00000167526.13 TPM= 16.15 Transcript Type= protein_coding chr16 89560679 89563067 89560679 89563067 + ENST00000484610.5@RPL13 ENST00000484610.5 protein_coding 89560679,89560940,89561227,89562335,89562884 89560712,89561063,89561751,89562391,89563067 Gene ID= ENSG00000167526.13 TPM= 1.36 Transcript Type= retained_intron chr16 89560711 89564542 89560711 89564542 + ENST00000393099.3@RPL13 ENST00000393099.3 protein_coding 89560711,89561227,89561578,89562335,89562884 89561063,89561368,89561751,89562391,89564542 Gene ID= ENSG00000167526.13 TPM= 214.01 Transcript Type= protein_coding chr16 89620592 89638429 89620592 89638429 + ENST00000393092.7@DPEP1 ENST00000393092.7 protein_coding 89620592,89630305,89635908,89636264,89636533,89636866,89637204,89637468,89637632,89637836,89638052 89620776,89630514,89636040,89636396,89636683,89636935,89637380,89637552,89637707,89637971,89638429 Gene ID= ENSG00000015413.9 TPM= 7.24 Transcript Type= protein_coding chr16 89644431 89657845 89644431 89657845 - ENST00000397901.7@CHMP1A ENST00000397901.7 protein_coding 89657582,89653904,89651569,89649351,89647203,89646527,89644431 89657845,89653923,89651646,89649497,89647331,89646714,89646087 Gene ID= ENSG00000131165.14 TPM= 282.53 Transcript Type= protein_coding chr16 89658047 89670456 89658047 89670456 + ENST00000611218.1@SPATA33 ENST00000611218.1 protein_coding 89658047,89669286 89658421,89670456 Gene ID= ENSG00000167523.13 TPM= 1.81 Transcript Type= protein_coding chr16 89658102 89661483 89658102 89661483 + ENST00000568929.1@SPATA33 ENST00000568929.1 protein_coding 89658102,89660540 89658421,89661483 Gene ID= ENSG00000167523.13 TPM= 1.81 Transcript Type= protein_coding chr16 89686668 89696364 89686668 89696364 + ENST00000353379.11@CDK10 ENST00000353379.11 protein_coding 89686668,89689252,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595 89686797,89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696364 Gene ID= ENSG00000185324.21 TPM= 36.87 Transcript Type= protein_coding chr16 89686670 89696363 89686670 89696363 + transcript4483.chr16.nic@CDK10 transcript4483.chr16.nic protein_coding 89686670,89689252,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595 89686759,89689324,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696363 Gene ID= ENSG00000185324.21 TPM= 15.14 Transcript Type= NA chr16 89686668 89696363 89686668 89696363 + transcript4490.chr16.nnic@CDK10 transcript4490.chr16.nnic protein_coding 89686668,89690553,89691443,89691806,89692449,89693274,89693398,89694173,89694665,89694931,89695293,89695595 89686759,89690624,89691545,89691887,89692516,89693326,89693467,89694232,89694788,89695070,89695345,89696363 Gene ID= ENSG00000185324.21 TPM= 5.18 Transcript Type= NA chr16 89686670 89696363 89686670 89696363 + transcript4526.chr16.nic@CDK10 transcript4526.chr16.nic protein_coding 89686670,89689252,89690553,89691443,89691806,89692449,89693274,89694931,89695293,89695595 89686759,89689324,89690624,89691545,89691887,89692516,89694788,89695070,89695345,89696363 Gene ID= ENSG00000185324.21 TPM= 4.81 Transcript Type= NA chr16 89686687 89696363 89686687 89696363 + transcript4529.chr16.nic@CDK10 transcript4529.chr16.nic protein_coding 89686687,89690553,89691443,89691806,89692449,89693274,89694665,89694931,89695293,89695595 89686797,89690624,89691545,89691887,89692516,89694232,89694788,89695070,89695345,89696363 Gene ID= ENSG00000185324.21 TPM= 5.96 Transcript Type= NA chr16 89686700 89696354 89686700 89696354 + ENST00000472018.5@CDK10 ENST00000472018.5 protein_coding 89686700,89689252,89690553,89691443,89691806,89692449,89693274,89694665,89694931,89695293,89695595 89686797,89689324,89690624,89691545,89691887,89692516,89694232,89694788,89695070,89695345,89696354 Gene ID= ENSG00000185324.21 TPM= 6.73 Transcript Type= retained_intron chr16 89696343 89701695 89696343 89701695 - ENST00000289805.9@SPATA2L ENST00000289805.9 protein_coding 89701628,89700930,89696343 89701695,89701233,89698305 Gene ID= ENSG00000158792.15 TPM= 28.98 Transcript Type= protein_coding chr16 89707132 89720724 89707132 89720724 - transcript4541.chr16.nnic@VPS9D1 transcript4541.chr16.nnic protein_coding 89720443,89719027,89716730,89716462,89712605,89712460,89712047,89711882,89711327,89710586,89709777,89709227,89708857,89708427,89707132 89720724,89719102,89716822,89716624,89712716,89712522,89712099,89711969,89711412,89711010,89709906,89709435,89708956,89708531,89707954 Gene ID= ENSG00000075399.13 TPM= 6.34 Transcript Type= NA chr16 89707132 89720880 89707132 89720880 - transcript4543.chr16.nic@VPS9D1 transcript4543.chr16.nic protein_coding 89720763,89719027,89716730,89716462,89712605,89712047,89711882,89711327,89710586,89709777,89709227,89708857,89708427,89707132 89720880,89719102,89716822,89716624,89712716,89712522,89711969,89711412,89711010,89709906,89709435,89708956,89708531,89707954 Gene ID= ENSG00000075399.13 TPM= 6.34 Transcript Type= NA chr16 89721002 89739839 89721002 89739839 + transcript4550.chr16.nic@ZNF276 transcript4550.chr16.nic protein_coding 89721002,89722531,89723137,89723279,89727279,89729235,89733302,89733482,89733921,89737806,89737976 89721845,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89739839 Gene ID= ENSG00000158805.11 TPM= 1.97 Transcript Type= NA chr16 89721033 89739841 89721033 89739841 + transcript4551.chr16.nnic@ZNF276 transcript4551.chr16.nnic protein_coding 89721033,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976 89721424,89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89739841 Gene ID= ENSG00000158805.11 TPM= 3.78 Transcript Type= NA chr16 89720624 89739841 89720624 89739841 + transcript4553.chr16.nic@ZNF276 transcript4553.chr16.nic protein_coding 89720624,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976 89722834,89723183,89723709,89727325,89729318,89733412,89733557,89734038,89737905,89739841 Gene ID= ENSG00000158805.11 TPM= 8.3 Transcript Type= NA chr16 89720624 89739839 89720624 89739839 + transcript4554.chr16.nic@ZNF276 transcript4554.chr16.nic protein_coding 89720624,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976 89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89739839 Gene ID= ENSG00000158805.11 TPM= 1.97 Transcript Type= NA chr16 89721547 89740634 89721547 89740634 + transcript4558.chr16.nnic@ZNF276 transcript4558.chr16.nnic protein_coding 89721547,89722531,89723137,89723279,89727279,89729235,89733302,89733921,89737721,89737976 89721845,89722834,89723183,89723709,89727325,89729318,89733557,89734038,89737905,89740634 Gene ID= ENSG00000158805.11 TPM= 1.97 Transcript Type= NA chr16 89720985 89740903 89720985 89740903 + ENST00000289816.9@ZNF276 ENST00000289816.9 protein_coding 89720985,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976 89721276,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89740903 Gene ID= ENSG00000158805.11 TPM= 7.4 Transcript Type= protein_coding chr16 89721544 89738571 89721544 89738571 + ENST00000443381.6@ZNF276 ENST00000443381.6 protein_coding 89721544,89722531,89723137,89723260,89727279,89729235,89733302,89733482,89733921,89737806,89737976 89721845,89722834,89723183,89723709,89727357,89729318,89733412,89733557,89734038,89737905,89738571 Gene ID= ENSG00000158805.11 TPM= 2.72 Transcript Type= protein_coding chr16 89828508 89871319 89828508 89871319 + ENST00000378247.7@SPIRE2 ENST00000378247.7 protein_coding 89828508,89845322,89850304,89854286,89854487,89855600,89856113,89858338,89859165,89860683,89863476,89863794,89868189,89869567,89870050 89828794,89845365,89850660,89854366,89854651,89855686,89856236,89858507,89859354,89860795,89863610,89863861,89868216,89869682,89871319 Gene ID= ENSG00000204991.10 TPM= 9.06 Transcript Type= protein_coding chr16 89873612 89911384 89873612 89911384 + ENST00000263346.12@TCF25 ENST00000263346.12 protein_coding 89873612,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89910591,89911080 89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89910663,89911384 Gene ID= ENSG00000141002.19 TPM= 363.51 Transcript Type= protein_coding chr16 89873586 89911384 89873586 89911384 + ENST00000263347.11@TCF25 ENST00000263347.11 protein_coding 89873586,89883351,89884582,89885848,89887652,89892193,89893728,89895038,89895990,89898557,89898767,89900635,89904118,89904938,89906194,89907243,89908966,89910591,89911080 89873859,89883512,89884656,89885966,89887717,89892275,89893858,89895137,89896083,89898649,89898872,89900794,89904205,89905096,89906284,89907322,89909083,89910663,89911384 Gene ID= ENSG00000141002.19 TPM= 16.69 Transcript Type= protein_coding chr16 89913581 89920971 89913581 89920971 + transcript4598.chr16.nnic@MC1R transcript4598.chr16.nnic protein_coding 89913581,89917876,89919558 89915140,89919072,89920971 Gene ID= ENSG00000258839.3 TPM= 2.72 Transcript Type= NA chr16 89923279 89936097 89923279 89936097 + ENST00000315491.11@TUBB3 ENST00000315491.11 protein_coding 89923279,89932571,89933468,89934729 89923458,89932679,89933578,89936097 Gene ID= ENSG00000258947.6 TPM= 32.6 Transcript Type= protein_coding chr16 89948685 89968065 89948685 89968065 + transcript4606.chr16.nic@DEF8 transcript4606.chr16.nic protein_coding 89948685,89949420,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861 89948814,89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968065 Gene ID= ENSG00000140995.16 TPM= 20.92 Transcript Type= NA chr16 89948752 89968065 89948752 89968065 + transcript4607.chr16.nic@DEF8 transcript4607.chr16.nic protein_coding 89948752,89949420,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964221,89964466,89965861 89948814,89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968065 Gene ID= ENSG00000140995.16 TPM= 13.22 Transcript Type= NA chr16 89948775 89968065 89948775 89968065 + transcript4610.chr16.nic@DEF8 transcript4610.chr16.nic protein_coding 89948775,89949417,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964466,89965861 89948814,89949513,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89964310,89964575,89968065 Gene ID= ENSG00000140995.16 TPM= 4.17 Transcript Type= NA chr16 89948734 89968065 89948734 89968065 + transcript4613.chr16.nic@DEF8 transcript4613.chr16.nic protein_coding 89948734,89954243,89955169,89957511,89959014,89960931,89961737,89962012,89963363,89964170,89964466,89965861 89948814,89954376,89955266,89957660,89959155,89961095,89961864,89962125,89963443,89964310,89964575,89968065 Gene ID= ENSG00000140995.16 TPM= 10.05 Transcript Type= NA chr16 89948731 89959363 89948731 89959363 + ENST00000610455.4@DEF8 ENST00000610455.4 protein_coding 89948731,89954243,89955169,89957511,89959014 89948814,89954376,89955266,89957660,89959363 Gene ID= ENSG00000140995.16 TPM= 5.43 Transcript Type= protein_coding chr16 89948795 89959366 89948795 89959366 + ENST00000418391.6@DEF8 ENST00000418391.6 protein_coding 89948795,89949417,89954243,89955169,89957511,89959014 89948814,89949513,89954376,89955266,89957660,89959366 Gene ID= ENSG00000140995.16 TPM= 7.24 Transcript Type= protein_coding chr16 89972580 89996622 89972580 89996622 + transcript4619.chr16.nic@AFG3L1P transcript4619.chr16.nic transcribed_unitary_pseudogene 89972580,89977639,89978810,89980242,89981773,89984531,89988852,89990866,89992721,89993768,89994693 89972765,89977802,89978878,89980336,89981923,89984599,89988951,89991003,89992828,89993893,89996622 Gene ID= ENSG00000223959.8 TPM= 1.81 Transcript Type= NA chr16 89972580 89996623 89972580 89996623 + transcript4620.chr16.nic@AFG3L1P transcript4620.chr16.nic transcribed_unitary_pseudogene 89972580,89977639,89978810,89980242,89981773,89984531,89988852,89990866,89992721,89993768,89994759 89972765,89977802,89978878,89980336,89981923,89984599,89988951,89991003,89992828,89993893,89996623 Gene ID= ENSG00000223959.8 TPM= 1.81 Transcript Type= NA chr16 90004865 90019473 90004865 90019473 - ENST00000002501.10@DBNDD1 ENST00000002501.10 protein_coding 90019311,90009284,90008784,90004865 90019473,90009430,90008924,90006492 Gene ID= ENSG00000003249.13 TPM= 22.64 Transcript Type= protein_coding chr16 90019646 90045282 90019646 90045282 + transcript4635.chr16.nic@GAS8 transcript4635.chr16.nic protein_coding 90019646,90031190,90032718,90035633,90036381,90037232,90037762,90040300,90042470,90043196 90019768,90031496,90032924,90035687,90036586,90037399,90037848,90040509,90042535,90045282 Gene ID= ENSG00000141013.16 TPM= 3.62 Transcript Type= NA chr16 90022651 90044958 90022651 90044958 + transcript4637.chr16.nic@GAS8 transcript4637.chr16.nic protein_coding 90022651,90027636,90031299,90032718,90035633,90036381,90037232,90037762,90042470,90043196 90022724,90027722,90031496,90032924,90035687,90036586,90037399,90040509,90042535,90044958 Gene ID= ENSG00000141013.16 TPM= 2.72 Transcript Type= NA chr16 90022651 90045282 90022651 90045282 + transcript4638.chr16.nic@GAS8 transcript4638.chr16.nic protein_coding 90022651,90027636,90031299,90032718,90036381,90037232,90037762,90040300,90042470,90043196 90022724,90027722,90031496,90032924,90036586,90037399,90037848,90040509,90042535,90045282 Gene ID= ENSG00000141013.16 TPM= 3.62 Transcript Type= NA chr17 212476 334066 212476 334066 - transcript6.chr17.nic@RPH3AL transcript6.chr17.nic protein_coding 333759,327467,321272,319420,281768,247111,219623,215654,212476 334066,327579,321415,319549,281854,247285,219736,215802,213923 Gene ID= ENSG00000181031.15 TPM= 6.57 Transcript Type= NA chr17 212476 352797 212476 352797 - transcript8.chr17.nic@RPH3AL transcript8.chr17.nic protein_coding 352593,327467,321272,319420,281768,247111,219623,215654,212476 352797,327579,321415,319549,281854,247285,219736,215802,213923 Gene ID= ENSG00000181031.15 TPM= 3.85 Transcript Type= NA chr17 212229 386298 212229 386298 - transcript10.chr17.nic@RPH3AL transcript10.chr17.nic protein_coding 386197,327467,321272,319420,281768,247111,219623,215654,212229 386298,327579,321415,319549,281854,247285,219736,215802,213923 Gene ID= ENSG00000181031.15 TPM= 8.38 Transcript Type= NA chr17 212499 352846 212499 352846 - transcript23.chr17.nnic@RPH3AL transcript23.chr17.nnic protein_coding 352712,327467,321272,319420,281768,247111,219623,212499 352846,327579,321415,319549,281854,247285,219736,213923 Gene ID= ENSG00000181031.15 TPM= 2.72 Transcript Type= NA chr17 212502 352807 212502 352807 - ENST00000331302.11@RPH3AL ENST00000331302.11 protein_coding 352712,333759,327467,321272,319420,281768,247111,219623,215654,212502 352807,333934,327579,321415,319549,281854,247285,219736,215802,213923 Gene ID= ENSG00000181031.15 TPM= 7.47 Transcript Type= protein_coding chr17 331161 333489 331161 333489 + transcript28.chr17.nnic@AC129507.1 transcript28.chr17.nnic processed_transcript 331161,331800,333056,333201 331717,331866,333138,333489 Gene ID= ENSG00000262061.5 TPM= 8.15 Transcript Type= NA chr17 410324 414663 410324 414663 + transcript32.chr17.nnic@C17orf97 transcript32.chr17.nnic protein_coding 410324,413148,413654 410646,413623,414663 Gene ID= ENSG00000187624.8 TPM= 9.06 Transcript Type= NA chr17 410327 414666 410327 414666 + ENST00000360127.6@C17orf97 ENST00000360127.6 protein_coding 410327,413148 410646,414666 Gene ID= ENSG00000187624.8 TPM= 4.53 Transcript Type= protein_coding chr17 439978 445939 439978 445939 - ENST00000329099.4@RFLNB ENST00000329099.4 protein_coding 445836,439978 445939,443494 Gene ID= ENSG00000183688.4 TPM= 36.22 Transcript Type= protein_coding chr17 732412 742972 732412 742972 + ENST00000308278.12@FAM57A ENST00000308278.12 protein_coding 732412,733098,737846,740505,741301 732769,733181,738047,740600,742972 Gene ID= ENSG00000167695.14 TPM= 5.43 Transcript Type= protein_coding chr17 744414 752261 744414 752261 - ENST00000319004.5@GEMIN4 ENST00000319004.5 protein_coding 752133,744414 752261,748032 Gene ID= ENSG00000179409.10 TPM= 43.47 Transcript Type= protein_coding chr17 759097 782341 759097 782341 - ENST00000301329.10@GLOD4 ENST00000301329.10 protein_coding 782166,778695,776868,775775,771325,770421,770044,769869,759097 782341,778744,776988,775919,771461,770507,770157,769955,760238 Gene ID= ENSG00000167699.13 TPM= 131.76 Transcript Type= protein_coding chr17 799313 979770 799313 979770 - ENST00000336868.7@NXN ENST00000336868.7 protein_coding 979319,825961,823632,822357,819439,805068,803682,799313 979770,826078,823765,822457,819545,805247,803806,801131 Gene ID= ENSG00000167693.16 TPM= 73.35 Transcript Type= protein_coding chr17 1344272 1400378 1344272 1400378 - ENST00000264335.12@YWHAE ENST00000264335.12 protein_coding 1400047,1364859,1361902,1361092,1354211,1344272 1400378,1365058,1362008,1361298,1354347,1345499 Gene ID= ENSG00000108953.16 TPM= 312.41 Transcript Type= protein_coding chr17 1344540 1400220 1344540 1400220 - ENST00000571732.5@YWHAE ENST00000571732.5 protein_coding 1400047,1369709,1364859,1361902,1361092,1354211,1344540 1400220,1369741,1365058,1362008,1361298,1354347,1345499 Gene ID= ENSG00000108953.16 TPM= 24.45 Transcript Type= protein_coding chr17 1420689 1456258 1420689 1456258 - ENST00000300574.2@CRK ENST00000300574.2 protein_coding 1455877,1436620,1420689 1456258,1437155,1423650 Gene ID= ENSG00000167193.7 TPM= 59.77 Transcript Type= protein_coding chr17 1420689 1456223 1420689 1456223 - ENST00000398970.5@CRK ENST00000398970.5 protein_coding 1455877,1436790,1420689 1456223,1437155,1423650 Gene ID= ENSG00000167193.7 TPM= 95.08 Transcript Type= protein_coding chr17 1464186 1486201 1464186 1486201 - ENST00000575158.5@MYO1C ENST00000575158.5 protein_coding 1486055,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464186 1486201,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752 Gene ID= ENSG00000197879.14 TPM= 8.6 Transcript Type= protein_coding chr17 1464098 1492812 1464098 1492812 - ENST00000359786.9@MYO1C ENST00000359786.9 protein_coding 1492413,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464098 1492812,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752 Gene ID= ENSG00000197879.14 TPM= 17.66 Transcript Type= protein_coding chr17 1464186 1485934 1464186 1485934 - ENST00000438665.6@MYO1C ENST00000438665.6 protein_coding 1485694,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464186 1485934,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752 Gene ID= ENSG00000197879.14 TPM= 81.95 Transcript Type= protein_coding chr17 1464188 1491678 1464188 1491678 - ENST00000361007.6@MYO1C ENST00000361007.6 protein_coding 1491600,1484148,1483610,1482861,1482478,1480706,1480527,1479592,1479431,1478616,1478410,1478087,1477891,1477505,1474938,1474812,1474610,1472123,1471907,1471223,1471071,1470621,1470435,1470175,1469531,1468403,1468253,1467988,1467840,1467480,1467242,1464188 1491678,1484303,1483725,1483059,1482558,1480885,1480625,1479705,1479502,1478735,1478492,1478192,1477971,1477596,1475032,1474858,1474690,1472228,1472024,1471336,1471147,1470689,1470519,1470334,1469614,1468496,1468308,1468123,1467910,1467577,1467341,1465752 Gene ID= ENSG00000197879.14 TPM= 42.11 Transcript Type= protein_coding chr17 1494571 1516888 1494571 1516888 - ENST00000421807.6@INPP5K ENST00000421807.6 protein_coding 1516456,1513872,1513453,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494571 1516888,1513979,1513561,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879 Gene ID= ENSG00000132376.19 TPM= 91.46 Transcript Type= protein_coding chr17 1494570 1516668 1494570 1516668 - transcript98.chr17.nic@INPP5K transcript98.chr17.nic protein_coding 1516456,1513872,1509683,1509178,1508115,1506980,1497936,1496666,1496319,1496060,1494570 1516668,1513979,1509799,1509353,1508226,1507089,1498122,1496803,1496402,1496164,1495879 Gene ID= ENSG00000132376.19 TPM= 8.15 Transcript Type= NA chr17 1516931 1518096 1516931 1518096 + ENST00000425081.2@PITPNA-AS1 ENST00000425081.2 antisense_RNA 1516931,1517718 1517093,1518096 Gene ID= ENSG00000236618.2 TPM= 9.96 Transcript Type= antisense_RNA chr17 1517991 1562785 1517991 1562785 - transcript103.chr17.nic@PITPNA transcript103.chr17.nic protein_coding 1562656,1558529,1553004,1548296,1543020,1541566,1538869,1535441,1535182,1534099,1521579,1517991 1562785,1558559,1553149,1548387,1543027,1541640,1538952,1535518,1535292,1534221,1521645,1520538 Gene ID= ENSG00000174238.14 TPM= 15.39 Transcript Type= NA chr17 1573780 1628432 1573780 1628432 - transcript110.chr17.nic@SLC43A2 transcript110.chr17.nic protein_coding 1628114,1627715,1616562,1614979,1613195,1593187,1591566,1591269,1590802,1585913,1583204,1578250,1576597,1573780 1628432,1627920,1616769,1615034,1613271,1593279,1591699,1591471,1590948,1586051,1583336,1578323,1576720,1575765 Gene ID= ENSG00000167703.14 TPM= 21.28 Transcript Type= NA chr17 1574372 1628341 1574372 1628341 - ENST00000571650.5@SLC43A2 ENST00000571650.5 protein_coding 1628081,1627715,1616562,1614979,1613195,1593187,1591566,1591269,1590802,1586949,1585913,1583204,1578250,1576597,1574372 1628341,1627920,1616769,1615034,1613271,1593279,1591699,1591471,1590948,1586960,1586051,1583336,1578323,1576720,1575765 Gene ID= ENSG00000167703.14 TPM= 3.17 Transcript Type= protein_coding chr17 1633858 1645747 1633858 1645747 - ENST00000263071.8@SCARF1 ENST00000263071.8 protein_coding 1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636941,1636709,1633858 1645747,1645239,1644935,1643967,1640666,1640040,1639742,1638926,1637062,1636855,1635617 Gene ID= ENSG00000074660.15 TPM= 39.39 Transcript Type= protein_coding chr17 1633865 1645723 1633865 1645723 - ENST00000434376.6@SCARF1 ENST00000434376.6 protein_coding 1645597,1645178,1644834,1643442,1640448,1639912,1639639,1638806,1636941,1636709,1633865 1645723,1645239,1644935,1643967,1640666,1639970,1639742,1638926,1637062,1636855,1635617 Gene ID= ENSG00000074660.15 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr17 1646150 1650077 1646150 1650077 - ENST00000301336.6@RILP ENST00000301336.6 protein_coding 1649577,1649412,1649200,1648799,1648350,1647835,1646906,1646150 1650077,1649505,1649306,1649044,1648495,1647957,1646989,1646619 Gene ID= ENSG00000167705.11 TPM= 19.92 Transcript Type= protein_coding chr17 1646155 1649866 1646155 1649866 - transcript129.chr17.nic@RILP transcript129.chr17.nic protein_coding 1649577,1649412,1649200,1648799,1648350,1647835,1646155 1649866,1649505,1649306,1649044,1648495,1647957,1646619 Gene ID= ENSG00000167705.11 TPM= 7.24 Transcript Type= NA chr17 1650629 1684882 1650629 1684882 - ENST00000304992.10@PRPF8 ENST00000304992.10 protein_coding 1684780,1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650629 1684882,1684582,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956 Gene ID= ENSG00000174231.16 TPM= 60.22 Transcript Type= protein_coding chr17 1650631 1684837 1650631 1684837 - ENST00000572621.5@PRPF8 ENST00000572621.5 protein_coding 1684472,1683533,1682129,1681820,1681478,1680929,1680726,1679609,1679291,1679017,1678762,1678518,1677565,1676976,1676505,1676207,1675928,1675620,1675152,1674442,1673746,1673357,1673081,1661906,1661611,1661271,1660993,1660698,1660432,1659841,1659357,1658526,1658253,1656648,1656392,1655350,1653777,1653542,1651648,1651414,1651108,1650631 1684837,1683701,1682293,1682038,1681690,1681054,1680831,1679799,1679410,1679206,1678881,1678652,1677694,1677172,1676711,1676370,1676054,1675812,1675339,1674680,1673892,1673567,1673197,1662153,1661790,1661406,1661162,1660827,1660578,1660001,1659548,1658763,1658381,1656761,1656565,1655543,1654016,1653683,1651788,1651553,1651310,1650956 Gene ID= ENSG00000174231.16 TPM= 27.62 Transcript Type= protein_coding chr17 1711519 1716264 1711519 1716264 - transcript157.chr17.nic@MIR22HG transcript157.chr17.nic lincRNA 1716130,1714371,1713856,1711519 1716264,1714453,1714014,1712646 Gene ID= ENSG00000186594.14 TPM= 2.72 Transcript Type= NA chr17 1711519 1716264 1711519 1716264 - transcript163.chr17.nic@MIR22HG transcript163.chr17.nic lincRNA 1716130,1714371,1711519 1716264,1714453,1714014 Gene ID= ENSG00000186594.14 TPM= 7.24 Transcript Type= NA chr17 1711511 1716251 1711511 1716251 - ENST00000574306.1@MIR22HG ENST00000574306.1 lincRNA 1716130,1711511 1716251,1714014 Gene ID= ENSG00000186594.14 TPM= 9.96 Transcript Type= lincRNA chr17 1711493 1716210 1711493 1716210 - ENST00000334146.7@MIR22HG ENST00000334146.7 lincRNA 1716130,1714371,1713703,1711493 1716210,1714453,1714014,1712399 Gene ID= ENSG00000186594.14 TPM= 6.34 Transcript Type= lincRNA chr17 1716563 1738597 1716563 1738597 + transcript145.chr17.nnic@WDR81 transcript145.chr17.nnic protein_coding 1716563,1727990,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736039,1737365 1716633,1728626,1730487,1730945,1731258,1732490,1732776,1734216,1735717,1736218,1738597 Gene ID= ENSG00000167716.18 TPM= 3.62 Transcript Type= NA chr17 1716536 1738599 1716536 1738599 + ENST00000309182.9@WDR81 ENST00000309182.9 protein_coding 1716536,1727990,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736039,1737365 1716633,1728626,1730487,1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738599 Gene ID= ENSG00000167716.18 TPM= 13.13 Transcript Type= protein_coding chr17 1716523 1738599 1716523 1738599 + ENST00000437219.6@WDR81 ENST00000437219.6 protein_coding 1716523,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736039,1737365 1716633,1730487,1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738599 Gene ID= ENSG00000167716.18 TPM= 4.53 Transcript Type= protein_coding chr17 1724540 1738594 1724540 1738594 + ENST00000419248.5@WDR81 ENST00000419248.5 protein_coding 1724540,1730380,1730755,1731068,1732325,1732666,1733527,1735572,1736039,1737365 1724786,1730487,1730945,1731258,1732490,1732831,1734216,1735717,1736218,1738594 Gene ID= ENSG00000167716.18 TPM= 3.17 Transcript Type= protein_coding chr17 1761959 1777574 1761959 1777574 + ENST00000254722.8@SERPINF1 ENST00000254722.8 protein_coding 1761959,1766903,1769852,1771029,1771872,1775058,1776532,1777187 1762113,1766994,1770050,1771184,1772075,1775200,1776742,1777574 Gene ID= ENSG00000132386.10 TPM= 93.27 Transcript Type= protein_coding chr17 1779538 1783959 1779538 1783959 - transcript174.chr17.nnic@SMYD4 transcript174.chr17.nnic protein_coding 1783616,1783360,1783035,1779538 1783959,1783476,1783158,1781439 Gene ID= ENSG00000186532.11 TPM= 4.23 Transcript Type= NA chr17 1779538 1783902 1779538 1783902 - transcript176.chr17.nnic@SMYD4 transcript176.chr17.nnic protein_coding 1783616,1783360,1783035,1779538 1783902,1783523,1783158,1781439 Gene ID= ENSG00000186532.11 TPM= 2.42 Transcript Type= NA chr17 1779538 1783917 1779538 1783917 - transcript177.chr17.nic@SMYD4 transcript177.chr17.nic protein_coding 1783360,1783035,1779538 1783917,1783158,1781439 Gene ID= ENSG00000186532.11 TPM= 4.23 Transcript Type= NA chr17 1829948 1898075 1829948 1898075 + transcript179.chr17.nnic@RPA1 transcript179.chr17.nnic protein_coding 1829948,1842803,1843920,1844578,1844974,1853101,1872434,1875661,1877212,1878993,1879215,1879560,1880543,1883812,1888675,1891833,1895009,1897071 1830126,1842853,1843998,1844686,1845114,1853189,1872526,1875793,1877314,1879061,1879407,1879699,1880691,1883944,1888851,1891940,1895095,1898075 Gene ID= ENSG00000132383.11 TPM= 5.43 Transcript Type= NA chr17 1934677 2025345 1934677 2025345 - ENST00000331238.6@RTN4RL1 ENST00000331238.6 protein_coding 2024853,1934677 2025345,1937808 Gene ID= ENSG00000185924.6 TPM= 48.9 Transcript Type= protein_coding chr17 2030110 2043430 2030110 2043430 + ENST00000263083.10@DPH1 ENST00000263083.10 protein_coding 2030110,2033505,2033779,2035970,2036529,2036835,2039755,2040218,2040505,2041103,2041481,2041768,2042605 2030230,2033657,2033842,2036091,2036686,2036956,2039823,2040374,2040605,2041181,2041621,2041875,2043430 Gene ID= ENSG00000108963.17 TPM= 63.39 Transcript Type= protein_coding chr17 2041936 2043430 2041936 2043430 + ENST00000572195.2@OVCA2 ENST00000572195.2 protein_coding 2041936,2042605 2042231,2043430 Gene ID= ENSG00000262664.2 TPM= 87.84 Transcript Type= protein_coding chr17 2055099 2063241 2055099 2063241 + ENST00000619757.4@HIC1 ENST00000619757.4 protein_coding 2055099,2056671 2055238,2063241 Gene ID= ENSG00000177374.12 TPM= 67.92 Transcript Type= protein_coding chr17 2056310 2059686 2056310 2059686 + ENST00000322941.3@HIC1 ENST00000322941.3 protein_coding 2056310,2056671 2056346,2059686 Gene ID= ENSG00000177374.12 TPM= 9.06 Transcript Type= protein_coding chr17 2059843 2303546 2059843 2303546 - transcript226.chr17.nnic@SMG6 transcript226.chr17.nnic protein_coding 2303014,2298906,2297863,2297243,2292871,2292552,2283625,2282647,2244658,2236492,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059843 2303546,2300664,2298055,2297353,2292977,2292630,2283735,2282859,2244719,2236637,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622 Gene ID= ENSG00000070366.13 TPM= 10.98 Transcript Type= NA chr17 2059843 2244736 2059843 2244736 - transcript235.chr17.nic@SMG6 transcript235.chr17.nic protein_coding 2244658,2236492,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059843 2244736,2236637,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622 Gene ID= ENSG00000070366.13 TPM= 13.02 Transcript Type= NA chr17 2059843 2214355 2059843 2214355 - transcript237.chr17.nic@SMG6 transcript237.chr17.nic protein_coding 2214139,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059843 2214355,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622 Gene ID= ENSG00000070366.13 TPM= 15.74 Transcript Type= NA chr17 2059843 2236662 2059843 2236662 - transcript239.chr17.nic@SMG6 transcript239.chr17.nic protein_coding 2236492,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059843 2236662,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622 Gene ID= ENSG00000070366.13 TPM= 13.02 Transcript Type= NA chr17 2059843 2071729 2059843 2071729 - transcript245.chr17.nnic@SMG6 transcript245.chr17.nnic protein_coding 2071393,2068778,2065468,2065073,2059843 2071729,2068931,2065679,2065154,2061622 Gene ID= ENSG00000070366.13 TPM= 5.96 Transcript Type= NA chr17 2059843 2303771 2059843 2303771 - ENST00000263073.10@SMG6 ENST00000263073.10 protein_coding 2303633,2298906,2297863,2297243,2292871,2292552,2283625,2282647,2244658,2236492,2188399,2186663,2172658,2085725,2081810,2068778,2065468,2065073,2059843 2303771,2300664,2298055,2297353,2292977,2292630,2283735,2282859,2244719,2236637,2188515,2186831,2172859,2085901,2081956,2068931,2065679,2065154,2061622 Gene ID= ENSG00000070366.13 TPM= 29.1 Transcript Type= protein_coding chr17 2303362 2327850 2303362 2327850 + transcript241.chr17.nic@SRR transcript241.chr17.nic protein_coding 2303362,2315557,2317870,2318826,2321306,2321542,2323136,2323655 2303477,2315728,2317996,2318929,2321425,2321616,2323345,2327850 Gene ID= ENSG00000167720.12 TPM= 3.62 Transcript Type= NA chr17 2337509 2381058 2337509 2381058 + transcript209.chr17.nnic@SGSM2 transcript209.chr17.nnic protein_coding 2337509,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432,2380265 2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2379516,2381058 Gene ID= ENSG00000141258.12 TPM= 2.84 Transcript Type= NA chr17 2337501 2381073 2337501 2381073 + transcript214.chr17.nic@SGSM2 transcript214.chr17.nic protein_coding 2337501,2343545,2361637,2362109,2362838,2363465,2364059,2364596,2364897,2365215,2367271,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432 2337745,2343620,2361799,2362270,2363134,2363599,2364183,2364663,2365057,2365341,2367405,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381073 Gene ID= ENSG00000141258.12 TPM= 4.65 Transcript Type= NA chr17 2337483 2381073 2337483 2381073 + transcript220.chr17.nic@SGSM2 transcript220.chr17.nic protein_coding 2337483,2343545,2361637,2362109,2362838,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432 2337745,2343620,2361799,2362270,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381073 Gene ID= ENSG00000141258.12 TPM= 6.47 Transcript Type= NA chr17 2337514 2381058 2337514 2381058 + ENST00000426855.6@SGSM2 ENST00000426855.6 protein_coding 2337514,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432 2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381058 Gene ID= ENSG00000141258.12 TPM= 35.44 Transcript Type= protein_coding chr17 2337512 2381050 2337512 2381050 + ENST00000268989.7@SGSM2 ENST00000268989.7 protein_coding 2337512,2343545,2361637,2362109,2362838,2362989,2363465,2364059,2364596,2364897,2365215,2367271,2371262,2372190,2372343,2372953,2373331,2375492,2376137,2376733,2376959,2377857,2379036,2379432 2337745,2343620,2361799,2362270,2362905,2363134,2363599,2364183,2364663,2365057,2365341,2367405,2371415,2372254,2372488,2373081,2373513,2375875,2376261,2376815,2377068,2377953,2379203,2381050 Gene ID= ENSG00000141258.12 TPM= 19.14 Transcript Type= protein_coding chr17 2384060 2401118 2384060 2401118 - ENST00000174618.4@MNT ENST00000174618.4 protein_coding 2400640,2394875,2394305,2394043,2387857,2384060 2401118,2395454,2394346,2394154,2388049,2387649 Gene ID= ENSG00000070444.14 TPM= 19.92 Transcript Type= protein_coding chr17 2384076 2400939 2384076 2400939 - transcript252.chr17.nnic@MNT transcript252.chr17.nnic protein_coding 2400640,2394875,2394043,2387857,2384076 2400939,2395454,2394154,2388052,2387651 Gene ID= ENSG00000070444.14 TPM= 9.06 Transcript Type= NA chr17 2416076 2511886 2416076 2511886 - ENST00000263092.10@METTL16 ENST00000263092.10 protein_coding 2511759,2502204,2477686,2473524,2467761,2464208,2441490,2438109,2420731,2416076 2511886,2502331,2477885,2473664,2467876,2464350,2441559,2438198,2420904,2420596 Gene ID= ENSG00000127804.12 TPM= 1.81 Transcript Type= protein_coding chr17 2594156 2681907 2594156 2681907 + transcript258.chr17.nnic@PAFAH1B1 transcript258.chr17.nnic protein_coding 2594156,2613658,2638099,2665372,2666016,2666992,2670163,2672655,2674060,2676505,2680164,2681729 2594362,2613862,2638320,2665456,2666090,2667198,2670331,2672757,2674288,2676606,2680320,2681907 Gene ID= ENSG00000007168.12 TPM= 1.81 Transcript Type= NA chr17 2593746 2685615 2593746 2685615 + ENST00000397195.9@PAFAH1B1 ENST00000397195.9 protein_coding 2593746,2638099,2665372,2666016,2666992,2670163,2672655,2674060,2676505,2680164,2681729 2594006,2638320,2665456,2666090,2667198,2670331,2672757,2674288,2676606,2680320,2685615 Gene ID= ENSG00000007168.12 TPM= 18.11 Transcript Type= protein_coding chr17 2689386 2707997 2689386 2707997 - transcript266.chr17.nnic@CLUH transcript266.chr17.nnic protein_coding 2707173,2704362,2703318,2701914,2701613,2701366,2701140,2700678,2700382,2697896,2696719,2696434,2696159,2695374,2695218,2694857,2694480,2694123,2693900,2692780,2692571,2692361,2692004,2691761,2691609,2689386 2707997,2704564,2703489,2702057,2701737,2701520,2701265,2700825,2700474,2698590,2696942,2696538,2696259,2695526,2695280,2695101,2694564,2694276,2694039,2692860,2692696,2692482,2692097,2691895,2691682,2690777 Gene ID= ENSG00000132361.16 TPM= 38.19 Transcript Type= NA chr17 2689386 2711811 2689386 2711811 - transcript273.chr17.nic@CLUH transcript273.chr17.nic protein_coding 2711562,2704362,2703318,2701914,2701613,2701366,2701140,2700678,2700382,2697896,2696719,2696434,2695374,2695218,2694857,2694480,2694123,2693900,2692780,2692571,2692361,2692004,2691761,2691609,2689386 2711811,2704564,2703489,2702057,2701737,2701520,2701265,2700825,2700474,2698590,2696942,2696538,2696259,2695280,2695101,2694564,2694276,2694039,2692860,2692696,2692482,2692097,2691895,2691682,2690777 Gene ID= ENSG00000132361.16 TPM= 15.85 Transcript Type= NA chr17 3440022 3513875 3440022 3513875 - transcript279.chr17.nic@SPATA22 transcript279.chr17.nic protein_coding 3513412,3469283,3467426,3462707,3462483,3448807,3446472,3443174,3440022 3513875,3469398,3467554,3462767,3462578,3449149,3446601,3443271,3440338 Gene ID= ENSG00000141255.12 TPM= 2.72 Transcript Type= NA chr17 3608262 3636322 3608262 3636322 - ENST00000225519.3@SHPK ENST00000225519.3 protein_coding 3636052,3630205,3624048,3623339,3621237,3615337,3608262 3636322,3630346,3624231,3623491,3621412,3615537,3610972 Gene ID= ENSG00000197417.7 TPM= 52.52 Transcript Type= protein_coding chr17 3636447 3662020 3636447 3662020 + transcript291.chr17.nnic@CTNS transcript291.chr17.nnic protein_coding 3636447,3637107,3640188,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236 3636831,3637316,3640267,3647522,3648931,3655101,3655326,3656586,3656795,3658175,3659975,3662020 Gene ID= ENSG00000040531.14 TPM= 2.04 Transcript Type= NA chr17 3636460 3662020 3636460 3662020 + transcript293.chr17.nnic@CTNS transcript293.chr17.nnic protein_coding 3636460,3637107,3640188,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236 3636703,3637316,3640267,3647522,3648931,3655101,3655352,3656586,3656795,3658175,3659975,3662020 Gene ID= ENSG00000040531.14 TPM= 3.85 Transcript Type= NA chr17 3636746 3662020 3636746 3662020 + transcript296.chr17.nic@CTNS transcript296.chr17.nic protein_coding 3636746,3637107,3640188,3647444,3654998,3655221,3656487,3656676,3658005,3659858,3660236 3636831,3637316,3640267,3647522,3655101,3655352,3656586,3656795,3658175,3659975,3662020 Gene ID= ENSG00000040531.14 TPM= 3.85 Transcript Type= NA chr17 3636759 3663079 3636759 3663079 + transcript299.chr17.nnic@CTNS transcript299.chr17.nnic protein_coding 3636759,3637107,3640188,3654998,3655221,3656487,3656676,3658005,3659858,3660236 3636831,3637316,3640267,3655101,3655352,3656586,3656795,3658175,3659975,3663079 Gene ID= ENSG00000040531.14 TPM= 2.04 Transcript Type= NA chr17 3636468 3661538 3636468 3661538 + ENST00000046640.7@CTNS ENST00000046640.7 protein_coding 3636468,3637107,3640188,3647444,3648847,3654998,3655221,3656487,3656676,3658005,3659858,3660236 3636831,3637316,3640267,3647522,3648931,3655101,3655352,3656586,3656795,3658175,3659975,3661538 Gene ID= ENSG00000040531.14 TPM= 51.62 Transcript Type= protein_coding chr17 3662894 3668726 3662894 3668726 - transcript306.chr17.nnic@TAX1BP3 transcript306.chr17.nnic protein_coding 3668488,3664679,3664195,3663659,3662894 3668726,3664798,3664272,3663885,3663563 Gene ID= ENSG00000213977.7 TPM= 86.57 Transcript Type= NA chr17 3662894 3668627 3662894 3668627 - transcript307.chr17.nnic@TAX1BP3 transcript307.chr17.nnic protein_coding 3668488,3664679,3664195,3663638,3662894 3668627,3664798,3664272,3663885,3663566 Gene ID= ENSG00000213977.7 TPM= 13.67 Transcript Type= NA chr17 3662902 3668682 3662902 3668682 - ENST00000225525.3@TAX1BP3 ENST00000225525.3 protein_coding 3668488,3664679,3664195,3662902 3668682,3664798,3664272,3663885 Gene ID= ENSG00000213977.7 TPM= 69.82 Transcript Type= protein_coding chr17 3668815 3669665 3668815 3669665 + ENST00000248378.5@EMC6 ENST00000248378.5 protein_coding 3668815,3669098 3668899,3669665 Gene ID= ENSG00000127774.6 TPM= 69.73 Transcript Type= protein_coding chr17 3668822 3669668 3668822 3669668 + ENST00000397133.2@EMC6 ENST00000397133.2 protein_coding 3668822,3669098 3669012,3669668 Gene ID= ENSG00000127774.6 TPM= 17.21 Transcript Type= protein_coding chr17 3714628 3723837 3714628 3723837 - ENST00000572179.5@ITGAE ENST00000572179.5 protein_coding 3723688,3720307,3716688,3714628 3723837,3720402,3716798,3714942 Gene ID= ENSG00000083457.11 TPM= 44.37 Transcript Type= processed_transcript chr17 3806756 3846267 3806756 3846267 - transcript324.chr17.nic@NCBP3 transcript324.chr17.nic protein_coding 3846041,3843086,3840100,3829243,3826087,3825767,3824942,3821953,3821249,3818263,3816116,3814322,3813117,3806756 3846267,3843151,3840205,3829368,3826215,3825843,3825050,3822052,3821352,3818572,3816270,3814483,3813279,3812654 Gene ID= ENSG00000074356.16 TPM= 4.53 Transcript Type= NA chr17 3839103 3846267 3839103 3846267 - transcript328.chr17.nic@NCBP3 transcript328.chr17.nic protein_coding 3846041,3843086,3839103 3846267,3843151,3840205 Gene ID= ENSG00000074356.16 TPM= 1.81 Transcript Type= NA chr17 3860315 3893003 3860315 3893003 - transcript329.chr17.nic@CAMKK1 transcript329.chr17.nic protein_coding 3892939,3885328,3884380,3883884,3883429,3883042,3882528,3882257,3881627,3880346,3876223,3873409,3872554,3869801,3869487,3865908,3860315 3893003,3885730,3884427,3883937,3883480,3883175,3882564,3882370,3881648,3880434,3876422,3873462,3872627,3869888,3869615,3866011,3862283 Gene ID= ENSG00000004660.14 TPM= 3.62 Transcript Type= NA chr17 3860315 3893044 3860315 3893044 - ENST00000348335.6@CAMKK1 ENST00000348335.6 protein_coding 3892939,3885328,3884380,3883884,3883429,3883042,3882528,3881627,3880346,3876223,3873409,3872554,3869801,3869487,3865908,3860315 3893044,3885730,3884427,3883937,3883480,3883175,3882564,3881648,3880434,3876422,3873462,3872627,3869888,3869615,3866011,3862283 Gene ID= ENSG00000004660.14 TPM= 22.64 Transcript Type= protein_coding chr17 3923868 3944839 3923868 3944839 - transcript347.chr17.nic@ATP2A3 transcript347.chr17.nic protein_coding 3944704,3943391,3942606,3941436,3940971,3937416,3936267,3935192,3930301,3929328,3928663,3923868 3944839,3943522,3942731,3941654,3941306,3937636,3936469,3935277,3930434,3929445,3928780,3925441 Gene ID= ENSG00000074370.17 TPM= 12.68 Transcript Type= NA chr17 3923870 3964464 3923870 3964464 - ENST00000309890.11@ATP2A3 ENST00000309890.11 protein_coding 3964174,3953693,3953347,3951581,3951251,3950693,3950511,3947391,3945060,3944704,3943391,3942606,3941436,3940971,3937416,3936267,3935192,3930301,3929328,3928663,3928227,3923870 3964464,3953710,3953429,3951685,3951389,3950773,3950596,3947855,3945148,3944806,3943522,3942731,3941654,3941306,3937636,3936469,3935277,3930434,3929445,3928780,3928327,3925441 Gene ID= ENSG00000074370.17 TPM= 3.62 Transcript Type= protein_coding chr17 4004445 4143020 4004445 4143020 - ENST00000381638.6@ZZEF1 ENST00000381638.6 protein_coding 4142542,4123907,4116972,4114299,4112609,4109653,4105693,4104633,4102317,4096609,4095831,4090719,4088678,4087434,4086486,4085670,4082437,4081376,4077883,4076868,4076637,4075263,4075097,4074150,4072608,4070684,4067163,4066447,4064361,4062753,4059171,4057994,4056216,4054057,4051971,4050781,4049708,4044224,4042429,4034015,4032828,4032126,4024919,4022709,4021129,4019669,4017836,4017371,4016323,4014347,4014090,4013449,4009604,4008883,4004445 4143020,4124051,4117166,4114470,4112808,4109863,4105809,4104811,4102415,4096700,4095979,4090830,4088893,4087534,4086655,4085803,4082504,4081490,4078042,4076989,4076759,4075429,4075178,4074351,4072756,4070924,4067242,4066540,4064829,4062917,4059290,4058155,4056345,4054195,4052136,4051043,4049859,4044374,4042568,4034292,4033002,4032258,4025118,4022828,4021320,4019769,4017971,4017730,4016466,4014515,4014188,4013614,4009757,4008954,4006970 Gene ID= ENSG00000074755.14 TPM= 4.98 Transcript Type= protein_coding chr17 4004446 4032298 4004446 4032298 - transcript349.chr17.nic@ZZEF1 transcript349.chr17.nic protein_coding 4032126,4024919,4022709,4021129,4019669,4017836,4017371,4016323,4014347,4014090,4013449,4009604,4008883,4004446 4032298,4025118,4022828,4021320,4019769,4017971,4017730,4016466,4014515,4014188,4013614,4009757,4008954,4006970 Gene ID= ENSG00000074755.14 TPM= 7.7 Transcript Type= NA chr17 4143184 4157697 4143184 4157697 + transcript355.chr17.nnic@CYB5D2 transcript355.chr17.nnic protein_coding 4143184,4149891,4154674,4156866 4143741,4150031,4154860,4157697 Gene ID= ENSG00000167740.9 TPM= 3.02 Transcript Type= NA chr17 4143211 4157572 4143211 4157572 + ENST00000575251.5@CYB5D2 ENST00000575251.5 protein_coding 4143211,4149891,4154674,4156866 4143763,4150031,4154860,4157572 Gene ID= ENSG00000167740.9 TPM= 2.11 Transcript Type= protein_coding chr17 4143256 4157697 4143256 4157697 + ENST00000301391.7@CYB5D2 ENST00000301391.7 protein_coding 4143256,4149891,4154674,4156866 4144005,4150031,4154860,4157697 Gene ID= ENSG00000167740.9 TPM= 51.01 Transcript Type= protein_coding chr17 4163906 4263979 4163906 4263979 - transcript359.chr17.nnic@ANKFY1 transcript359.chr17.nnic protein_coding 4263932,4242256,4235772,4216983,4209824,4207933,4206321,4197373,4195403,4194978,4189382,4184818,4183812,4183398,4182181,4181254,4179721,4178857,4177126,4173909,4173354,4172556,4170715,4169198,4163906 4263979,4242448,4235890,4217118,4209947,4208082,4206486,4197577,4195471,4195177,4189479,4185046,4183910,4183551,4182349,4181372,4179877,4179057,4177302,4174056,4173444,4172680,4170861,4169288,4164173 Gene ID= ENSG00000185722.16 TPM= 1.81 Transcript Type= NA chr17 4163907 4263977 4163907 4263977 - ENST00000341657.8@ANKFY1 ENST00000341657.8 protein_coding 4263932,4242256,4235772,4216983,4209824,4207933,4206321,4197373,4195403,4194978,4189382,4184818,4183812,4183398,4182181,4181254,4179721,4178857,4177126,4173909,4173354,4172556,4170715,4169198,4163907 4263977,4242448,4235890,4217118,4209947,4208082,4206486,4197577,4195471,4195177,4189479,4185046,4183910,4183551,4182349,4181372,4179877,4179057,4177302,4174056,4173444,4172680,4170861,4169288,4167911 Gene ID= ENSG00000185722.16 TPM= 19.02 Transcript Type= protein_coding chr17 4269259 4366482 4269259 4366482 - ENST00000396981.6@UBE2G1 ENST00000396981.6 protein_coding 4366271,4307021,4296717,4289230,4282798,4269259 4366482,4307123,4296814,4289408,4282921,4272516 Gene ID= ENSG00000132388.12 TPM= 18.11 Transcript Type= protein_coding chr17 4444940 4488222 4444940 4488222 + transcript369.chr17.nic@SPNS3 transcript369.chr17.nic protein_coding 4444940,4446048,4446896,4448155,4449235,4453016,4478572,4486228,4486412,4487806 4445168,4446199,4446962,4448303,4449387,4453205,4478637,4486326,4486583,4488222 Gene ID= ENSG00000182557.7 TPM= 4.98 Transcript Type= NA chr17 4445228 4488222 4445228 4488222 + transcript370.chr17.nnic@SPNS3 transcript370.chr17.nnic protein_coding 4445228,4446048,4446896,4448155,4449235,4453016,4478572,4486228,4486412,4487806 4445318,4446199,4446962,4448303,4449387,4453205,4478637,4486326,4486583,4488222 Gene ID= ENSG00000182557.7 TPM= 5.89 Transcript Type= NA chr17 4498838 4539035 4498838 4539035 + ENST00000329078.7@SPNS2 ENST00000329078.7 protein_coding 4498838,4513247,4525057,4530632,4531053,4532542,4532977,4533243,4533788,4536076,4536263,4536900,4537453 4499417,4513312,4525193,4530783,4531119,4532684,4533129,4533432,4533853,4536174,4536426,4536946,4539035 Gene ID= ENSG00000183018.8 TPM= 19.02 Transcript Type= protein_coding chr17 4538897 4555386 4538897 4555386 - ENST00000381556.6@MYBBP1A ENST00000381556.6 protein_coding 4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4539439,4538897 4555386,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967,4538975 Gene ID= ENSG00000132382.14 TPM= 1.81 Transcript Type= protein_coding chr17 4538902 4555631 4538902 4555631 - ENST00000254718.8@MYBBP1A ENST00000254718.8 protein_coding 4555127,4554861,4554195,4554019,4553810,4552451,4552125,4551880,4550058,4549332,4548524,4548143,4547958,4545846,4545610,4545259,4545026,4544751,4544489,4542913,4542616,4542464,4541784,4541463,4540348,4538902 4555631,4554956,4554278,4554093,4553917,4552626,4552292,4551997,4550353,4549442,4548649,4548310,4548057,4545942,4545761,4545345,4545175,4544921,4544646,4543165,4542741,4542532,4541891,4541564,4540484,4539967 Gene ID= ENSG00000132382.14 TPM= 22.64 Transcript Type= protein_coding chr17 4710597 4721499 4710597 4721499 + transcript404.chr17.nic@ARRB2 transcript404.chr17.nic protein_coding 4710597,4715013,4715973,4716147,4716412,4717217,4717685,4717888,4719283,4720216,4720393,4720586,4720946 4710744,4715043,4716033,4716191,4716608,4717276,4717752,4718684,4719420,4720299,4720472,4720640,4721499 Gene ID= ENSG00000141480.17 TPM= 5.43 Transcript Type= NA chr17 4731434 4733610 4731434 4733610 + ENST00000293777.5@MED11 ENST00000293777.5 protein_coding 4731434,4731776,4733050 4731574,4731906,4733610 Gene ID= ENSG00000161920.9 TPM= 31.69 Transcript Type= protein_coding chr17 4733526 4739819 4733526 4739819 - ENST00000293778.10@CXCL16 ENST00000293778.10 protein_coding 4739261,4738782,4738408,4735092,4734583,4733526 4739819,4738920,4738490,4735508,4734652,4734479 Gene ID= ENSG00000161921.14 TPM= 48.9 Transcript Type= protein_coding chr17 4785285 4786432 4785285 4786432 - ENST00000328739.5@VMO1 ENST00000328739.5 protein_coding 4786158,4785937,4785285 4786432,4786052,4785659 Gene ID= ENSG00000182853.11 TPM= 7.24 Transcript Type= protein_coding chr17 4796144 4798503 4796144 4798503 + ENST00000270586.7@PSMB6 ENST00000270586.7 protein_coding 4796144,4796728,4797438,4797682,4798009,4798280 4796296,4796795,4797569,4797811,4798153,4798503 Gene ID= ENSG00000142507.9 TPM= 227.29 Transcript Type= protein_coding chr17 4807096 4823434 4807096 4823434 + ENST00000263088.10@PLD2 ENST00000263088.10 protein_coding 4807096,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640 4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819582,4821907,4823434 Gene ID= ENSG00000129219.13 TPM= 30.34 Transcript Type= protein_coding chr17 4807169 4823428 4807169 4823428 + ENST00000572940.5@PLD2 ENST00000572940.5 protein_coding 4807169,4807772,4807984,4808274,4809100,4809298,4809493,4809691,4809877,4810802,4814418,4814633,4815476,4815764,4816620,4816937,4817146,4818002,4818297,4818494,4818774,4819084,4819429,4821793,4822640 4807225,4807881,4808114,4808416,4809205,4809363,4809551,4809783,4810029,4810951,4814501,4814711,4815586,4815934,4816746,4817055,4817259,4818106,4818385,4818607,4818823,4819218,4819549,4821907,4823428 Gene ID= ENSG00000129219.13 TPM= 13.13 Transcript Type= protein_coding chr17 4833340 4898060 4833340 4898060 + transcript441.chr17.nic@MINK1 transcript441.chr17.nic protein_coding 4833340,4878317,4880984,4881132,4884363,4884912,4885483,4885911,4886120,4886451,4887110,4887580,4889647,4890517,4890951,4891516,4892149,4892656,4892979,4893286,4893434,4893988,4894174,4894525,4895075,4895350,4895698,4896003,4896193,4896429,4896674,4897204 4833640,4878382,4881040,4881257,4884473,4885002,4885613,4885965,4886198,4886626,4887179,4887790,4889763,4890735,4891124,4891716,4892234,4892768,4893067,4893309,4893597,4894093,4894311,4894633,4895242,4895493,4895832,4896103,4896342,4896588,4896813,4898060 Gene ID= ENSG00000141503.15 TPM= 15.1 Transcript Type= NA chr17 4833388 4898053 4833388 4898053 + ENST00000355280.10@MINK1 ENST00000355280.10 protein_coding 4833388,4878317,4880984,4881132,4884363,4884912,4885483,4885911,4886120,4886451,4887110,4887580,4889647,4890517,4890951,4891456,4892149,4892402,4892656,4892979,4893434,4893988,4894174,4894525,4895075,4895350,4895698,4896003,4896193,4896429,4896674,4897204 4833640,4878382,4881040,4881257,4884473,4885002,4885613,4885965,4886198,4886626,4887179,4887790,4889763,4890735,4891124,4891716,4892234,4892512,4892768,4893067,4893597,4894093,4894311,4894633,4895242,4895493,4895832,4896103,4896342,4896588,4896813,4898053 Gene ID= ENSG00000141503.15 TPM= 29.58 Transcript Type= protein_coding chr17 4833400 4898054 4833400 4898054 + ENST00000347992.11@MINK1 ENST00000347992.11 protein_coding 4833400,4878317,4880984,4881132,4884363,4884912,4885483,4885911,4886120,4886451,4887110,4887580,4889647,4890517,4890951,4891456,4892149,4892656,4892979,4893286,4893434,4893988,4894174,4894525,4895075,4895350,4895698,4896003,4896193,4896429,4896674,4897204 4833640,4878382,4881040,4881257,4884473,4885002,4885613,4885965,4886198,4886626,4887179,4887790,4889763,4890735,4891124,4891716,4892234,4892768,4893067,4893309,4893597,4894093,4894311,4894633,4895242,4895493,4895832,4896103,4896342,4896588,4896813,4898054 Gene ID= ENSG00000141503.15 TPM= 30.49 Transcript Type= protein_coding chr17 4934926 4940046 4934926 4940046 - transcript463.chr17.nic@SLC25A11 transcript463.chr17.nic protein_coding 4939816,4939060,4938769,4938512,4938154,4938023,4934926 4940046,4939212,4938975,4938602,4938429,4938074,4937896 Gene ID= ENSG00000108528.13 TPM= 4.53 Transcript Type= NA chr17 4937130 4940251 4937130 4940251 - ENST00000225665.11@SLC25A11 ENST00000225665.11 protein_coding 4939816,4939060,4938769,4938512,4938339,4938154,4938023,4937130 4940251,4939212,4938975,4938602,4938429,4938253,4938074,4937896 Gene ID= ENSG00000108528.13 TPM= 172.51 Transcript Type= protein_coding chr17 4937317 4940030 4937317 4940030 - ENST00000574710.1@SLC25A11 ENST00000574710.1 protein_coding 4938769,4938512,4938339,4938154,4938023,4937317 4940030,4938602,4938429,4938253,4938074,4937896 Gene ID= ENSG00000108528.13 TPM= 6.79 Transcript Type= retained_intron chr17 4940082 4945221 4940082 4945221 + transcript450.chr17.nic@RNF167 transcript450.chr17.nic protein_coding 4940082,4940487,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715 4940360,4940726,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945221 Gene ID= ENSG00000108523.15 TPM= 12.68 Transcript Type= NA chr17 4940026 4945221 4940026 4945221 + transcript452.chr17.nic@RNF167 transcript452.chr17.nic protein_coding 4940026,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715 4940230,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945221 Gene ID= ENSG00000108523.15 TPM= 3.62 Transcript Type= NA chr17 4940070 4945221 4940070 4945221 + transcript453.chr17.nic@RNF167 transcript453.chr17.nic protein_coding 4940070,4940487,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715 4940230,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945221 Gene ID= ENSG00000108523.15 TPM= 6.34 Transcript Type= NA chr17 4940081 4945221 4940081 4945221 + transcript454.chr17.nic@RNF167 transcript454.chr17.nic protein_coding 4940081,4940873,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715 4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945221 Gene ID= ENSG00000108523.15 TPM= 4.53 Transcript Type= NA chr17 4940128 4945222 4940128 4945222 + ENST00000262482.10@RNF167 ENST00000262482.10 protein_coding 4940128,4940487,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715 4940360,4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945222 Gene ID= ENSG00000108523.15 TPM= 53.43 Transcript Type= protein_coding chr17 4940381 4945191 4940381 4945191 + ENST00000575111.5@RNF167 ENST00000575111.5 protein_coding 4940381,4941077,4942341,4942577,4942851,4943179,4943426,4944558,4944715 4940993,4941157,4942466,4942664,4942941,4943284,4943519,4944638,4945191 Gene ID= ENSG00000108523.15 TPM= 5.43 Transcript Type= protein_coding chr17 4945652 4949014 4945652 4949014 - ENST00000225655.5@PFN1 ENST00000225655.5 protein_coding 4948263,4946628,4945652 4949014,4946820,4945997 Gene ID= ENSG00000108518.7 TPM= 534.72 Transcript Type= protein_coding chr17 4959228 4967872 4959228 4967872 - ENST00000206020.7@SPAG7 ENST00000206020.7 protein_coding 4967720,4960786,4960459,4960234,4960022,4959760,4959228 4967872,4960853,4960547,4960318,4960111,4959916,4959643 Gene ID= ENSG00000091640.7 TPM= 55.24 Transcript Type= protein_coding chr17 4965830 4967808 4965830 4967808 - ENST00000571023.1@SPAG7 ENST00000571023.1 protein_coding 4967720,4965830 4967808,4966319 Gene ID= ENSG00000091640.7 TPM= 1.81 Transcript Type= processed_transcript chr17 4967994 4987661 4967994 4987661 - transcript477.chr17.nic@CAMTA2 transcript477.chr17.nic protein_coding 4987593,4986192,4985880,4982976,4982757,4981678,4981225,4979684,4978504,4977058,4974385,4973585,4973175,4972769,4972232,4970340,4969902,4969630,4969500,4969150,4968907,4967994 4987661,4986286,4985983,4983043,4982892,4981742,4981359,4980621,4978630,4977192,4974500,4973769,4973253,4972991,4972536,4970536,4970085,4969701,4969520,4969337,4968981,4968819 Gene ID= ENSG00000108509.20 TPM= 3.32 Transcript Type= NA chr17 4967994 4987661 4967994 4987661 - transcript478.chr17.nic@CAMTA2 transcript478.chr17.nic protein_coding 4987593,4986192,4985880,4982976,4982757,4981678,4981225,4979684,4978504,4977058,4974385,4973585,4973175,4972769,4972232,4970340,4969902,4969630,4969500,4969150,4968907,4967994 4987661,4986286,4985983,4983043,4982892,4981831,4981359,4980621,4978630,4977192,4974500,4973769,4973253,4972991,4972536,4970536,4970085,4969701,4969520,4969337,4968981,4968819 Gene ID= ENSG00000108509.20 TPM= 3.32 Transcript Type= NA chr17 4967998 4987652 4967998 4987652 - ENST00000348066.7@CAMTA2 ENST00000348066.7 protein_coding 4987593,4986192,4985880,4982976,4982757,4982089,4981678,4981225,4979684,4978504,4977058,4974385,4973585,4973175,4972769,4972232,4970340,4969902,4969630,4969500,4969150,4968907,4967998 4987652,4986286,4985983,4983043,4982892,4982160,4981831,4981359,4980621,4978630,4977192,4974500,4973769,4973253,4972991,4972536,4970536,4970085,4969701,4969520,4969337,4968981,4968819 Gene ID= ENSG00000108509.20 TPM= 6.95 Transcript Type= protein_coding chr17 4997910 5024731 4997910 5024731 + transcript489.chr17.nic@KIF1C transcript489.chr17.nic protein_coding 4997910,4999013,4999850,5000220,5000772,5001222,5002059,5002464,5002731,5003612,5003851,5003998,5004567,5004855,5006915,5007263,5007467,5013653,5014743,5019996,5020492,5020806,5022092,5023468 4998156,4999046,4999970,5000352,5000848,5001401,5002124,5002642,5002842,5003689,5003916,5004073,5004645,5005000,5007084,5007342,5007542,5013732,5014837,5020079,5020678,5020878,5022709,5024731 Gene ID= ENSG00000129250.11 TPM= 25.36 Transcript Type= NA chr17 5078248 5096374 5078248 5096374 + ENST00000318833.3@ZFP3 ENST00000318833.3 protein_coding 5078248,5091497 5078575,5096374 Gene ID= ENSG00000180787.5 TPM= 2.72 Transcript Type= protein_coding chr17 5105621 5111863 5105621 5111863 - transcript503.chr17.nic@ZNF232 transcript503.chr17.nic protein_coding 5111800,5109394,5108926,5105621 5111863,5109768,5109052,5106506 Gene ID= ENSG00000167840.13 TPM= 1.81 Transcript Type= NA chr17 5111966 5114393 5111966 5114393 + transcript508.chr17.nnic@AC012146.1 transcript508.chr17.nnic processed_transcript 5111966,5113386,5114158 5112101,5113452,5114393 Gene ID= ENSG00000234327.7 TPM= 2.26 Transcript Type= NA chr17 5111932 5114377 5111932 5114377 + ENST00000413077.1@AC012146.1 ENST00000413077.1 processed_transcript 5111932,5113386,5114158 5112118,5113452,5114377 Gene ID= ENSG00000234327.7 TPM= 15.85 Transcript Type= antisense_RNA chr17 5208961 5234860 5208961 5234860 - ENST00000574081.5@SCIMP ENST00000574081.5 protein_coding 5234735,5223333,5221287,5214925,5208961 5234860,5223456,5221350,5214998,5210955 Gene ID= ENSG00000161929.14 TPM= 3.62 Transcript Type= protein_coding chr17 5282263 5385809 5282263 5385809 + transcript517.chr17.nnic@RABEP1 transcript517.chr17.nnic protein_coding 5282263,5308694,5331949,5335184,5338019,5346790,5350472,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177,5380364,5381389,5383122 5282520,5308822,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378232,5380462,5381505,5385809 Gene ID= ENSG00000029725.16 TPM= 1.81 Transcript Type= NA chr17 5282284 5384739 5282284 5384739 + transcript524.chr17.nic@RABEP1 transcript524.chr17.nic protein_coding 5282284,5331949,5335184,5338019,5346790,5350451,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177,5380364,5381389,5383122 5282520,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378232,5380462,5381505,5384739 Gene ID= ENSG00000029725.16 TPM= 1.81 Transcript Type= NA chr17 5282300 5385812 5282300 5385812 + ENST00000537505.5@RABEP1 ENST00000537505.5 protein_coding 5282300,5308694,5331949,5335184,5338019,5346790,5350451,5354359,5361208,5362912,5365122,5368370,5373314,5377116,5378177,5380364,5381389,5383122 5282520,5308822,5332152,5335344,5338138,5346925,5350629,5354490,5361675,5363016,5365238,5368468,5373454,5377305,5378232,5380462,5381505,5385812 Gene ID= ENSG00000029725.16 TPM= 69.73 Transcript Type= protein_coding chr17 5419641 5432876 5419641 5432876 + ENST00000381209.7@RPAIN ENST00000381209.7 protein_coding 5419641,5421296,5422769,5425971,5426236,5428071,5432542 5420291,5421466,5422829,5426082,5426299,5428211,5432876 Gene ID= ENSG00000129197.14 TPM= 20.37 Transcript Type= protein_coding chr17 5419641 5432876 5419641 5432876 + ENST00000381208.9@RPAIN ENST00000381208.9 protein_coding 5419641,5421296,5422769,5425971,5426236,5432542 5420291,5421466,5422829,5426082,5426299,5432876 Gene ID= ENSG00000129197.14 TPM= 8.6 Transcript Type= protein_coding chr17 5420175 5432876 5420175 5432876 + transcript537.chr17.nnic@RPAIN transcript537.chr17.nnic protein_coding 5420175,5421296,5422769,5426137,5428071,5432542 5420291,5421466,5422829,5426299,5428211,5432876 Gene ID= ENSG00000129197.14 TPM= 4.07 Transcript Type= NA chr17 5419641 5432876 5419641 5432876 + ENST00000571558.5@RPAIN ENST00000571558.5 protein_coding 5419641,5421296,5422769,5426236,5428071,5432542 5420291,5421466,5422829,5426299,5428211,5432876 Gene ID= ENSG00000129197.14 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr17 5419641 5432876 5419641 5432876 + ENST00000573577.5@RPAIN ENST00000573577.5 protein_coding 5419641,5421296,5422769,5426236,5432542 5420291,5421466,5422829,5426299,5432876 Gene ID= ENSG00000129197.14 TPM= 4.07 Transcript Type= nonsense_mediated_decay chr17 5432777 5439155 5432777 5439155 - ENST00000225698.8@C1QBP ENST00000225698.8 protein_coding 5438842,5438123,5434873,5433669,5433293,5432777 5439155,5438273,5434966,5433767,5433415,5433164 Gene ID= ENSG00000108561.8 TPM= 455.49 Transcript Type= protein_coding chr17 5440918 5468910 5440918 5468910 - transcript546.chr17.nnic@DHX33 transcript546.chr17.nnic protein_coding 5468571,5463529,5462139,5440918 5468910,5463689,5462546,5442093 Gene ID= ENSG00000005100.12 TPM= 1.81 Transcript Type= NA chr17 5471252 5486207 5471252 5486207 - transcript547.chr17.nic@DERL2 transcript547.chr17.nic protein_coding 5486069,5485151,5482809,5481296,5481101,5480387,5480054,5471252 5486207,5485216,5482882,5481389,5481142,5480459,5480144,5474789 Gene ID= ENSG00000072849.10 TPM= 3.02 Transcript Type= NA chr17 5474291 5486207 5474291 5486207 - transcript549.chr17.nnic@DERL2 transcript549.chr17.nnic protein_coding 5486069,5485151,5482809,5481296,5480387,5480054,5477848,5474291 5486207,5485216,5482882,5481389,5480582,5480144,5477999,5474789 Gene ID= ENSG00000072849.10 TPM= 2.72 Transcript Type= NA chr17 5471252 5486207 5471252 5486207 - transcript552.chr17.nic@DERL2 transcript552.chr17.nic protein_coding 5486069,5485151,5482809,5481101,5480387,5480054,5471252 5486207,5485216,5482882,5481389,5480543,5480144,5474789 Gene ID= ENSG00000072849.10 TPM= 3.92 Transcript Type= NA chr17 5471251 5486217 5471251 5486217 - ENST00000158771.8@DERL2 ENST00000158771.8 protein_coding 5486069,5485151,5482809,5481296,5480387,5480054,5471251 5486217,5485216,5482882,5481389,5480582,5480144,5474789 Gene ID= ENSG00000072849.10 TPM= 69.12 Transcript Type= protein_coding chr17 5486870 5490813 5486870 5490813 + transcript564.chr17.nnic@MIS12 transcript564.chr17.nnic protein_coding 5486870,5488196,5488823 5487063,5488589,5490813 Gene ID= ENSG00000167842.15 TPM= 1.81 Transcript Type= NA chr17 5499427 5584509 5499427 5584509 - ENST00000544378.6@NLRP1 ENST00000544378.6 protein_coding 5583687,5582670,5581859,5558339,5553386,5541857,5539415,5536851,5533897,5533292,5532822,5530481,5521524,5520881,5517746,5501737,5499427 5584509,5582846,5582062,5560043,5553556,5542027,5539585,5536940,5533988,5533384,5532984,5530704,5521786,5521012,5517887,5501872,5499950 Gene ID= ENSG00000091592.15 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr17 5501385 5584531 5501385 5584531 - ENST00000262467.9@NLRP1 ENST00000262467.9 protein_coding 5583687,5582670,5581859,5558339,5553386,5541857,5539415,5536851,5533897,5533292,5532822,5530481,5521524,5520881,5517746,5501385 5584531,5582846,5582062,5560043,5553556,5542027,5539585,5536940,5533988,5533384,5532984,5530704,5521786,5521012,5517887,5501872 Gene ID= ENSG00000091592.15 TPM= 2.72 Transcript Type= protein_coding chr17 5514127 5584448 5514127 5584448 - ENST00000269280.8@NLRP1 ENST00000269280.8 protein_coding 5584293,5583687,5582670,5581859,5558339,5553386,5541857,5539415,5536851,5533897,5533304,5532822,5530481,5521524,5517746,5515473,5514127 5584448,5583959,5582846,5582062,5560043,5553556,5542027,5539585,5536940,5533988,5533384,5532984,5530704,5521786,5517887,5515517,5515073 Gene ID= ENSG00000091592.15 TPM= 2.72 Transcript Type= protein_coding chr17 6444415 6451469 6444415 6451469 + ENST00000572447.5@PIMREG ENST00000572447.5 protein_coding 6444415,6445076,6447463,6449312,6450028,6450362 6444488,6445404,6447758,6449407,6450072,6451469 Gene ID= ENSG00000129195.15 TPM= 9.06 Transcript Type= protein_coding chr17 6578151 6640927 6578151 6640927 - ENST00000361413.7@KIAA0753 ENST00000361413.7 protein_coding 6640637,6635011,6628117,6624755,6623509,6622882,6620788,6611919,6609994,6608348,6607181,6606873,6600380,6599237,6596158,6594972,6590510,6589779,6578151 6640927,6635171,6628741,6624861,6623571,6623097,6620998,6612148,6610160,6608464,6607270,6606962,6600458,6599320,6596343,6595053,6590630,6590003,6579864 Gene ID= ENSG00000198920.9 TPM= 2.72 Transcript Type= protein_coding chr17 6641016 6643114 6641016 6643114 + ENST00000570330.5@TXNDC17 ENST00000570330.5 protein_coding 6641016,6641753,6642249,6642951 6641152,6641834,6642324,6643114 Gene ID= ENSG00000129235.10 TPM= 12.68 Transcript Type= protein_coding chr17 6640985 6643067 6640985 6643067 + ENST00000576020.5@TXNDC17 ENST00000576020.5 protein_coding 6640985,6641753,6642249,6642951 6641100,6641834,6642324,6643067 Gene ID= ENSG00000129235.10 TPM= 6.34 Transcript Type= processed_transcript chr17 6643315 6651634 6643315 6651634 - ENST00000225728.7@MED31 ENST00000225728.7 protein_coding 6651501,6650356,6649982,6643315 6651634,6650433,6650078,6644659 Gene ID= ENSG00000108590.10 TPM= 20.83 Transcript Type= protein_coding chr17 6644279 6651634 6644279 6651634 - ENST00000575197.1@MED31 ENST00000575197.1 protein_coding 6651501,6650356,6644279 6651634,6650433,6644659 Gene ID= ENSG00000108590.10 TPM= 1.81 Transcript Type= protein_coding chr17 6684713 6713567 6684713 6713567 - ENST00000433363.6@SLC13A5 ENST00000433363.6 protein_coding 6713232,6707028,6706642,6703878,6702970,6701004,6695726,6694097,6693044,6690779,6687529,6684713 6713567,6707156,6706778,6704056,6703138,6701126,6695941,6694197,6693162,6690940,6687666,6686338 Gene ID= ENSG00000141485.16 TPM= 10.87 Transcript Type= protein_coding chr17 6756054 6775643 6756054 6775643 + transcript602.chr17.nic@XAF1 transcript602.chr17.nic protein_coding 6756054,6758089,6759662,6760406,6761886,6762155,6770643,6773113 6756110,6758224,6759718,6760601,6762037,6762240,6770984,6775643 Gene ID= ENSG00000132530.16 TPM= 1.81 Transcript Type= NA chr17 6755840 6775647 6755840 6775647 + ENST00000361842.7@XAF1 ENST00000361842.7 protein_coding 6755840,6758089,6759662,6760406,6762155,6770643,6773113 6756110,6758224,6759718,6760601,6762240,6770984,6775647 Gene ID= ENSG00000132530.16 TPM= 3.62 Transcript Type= protein_coding chr17 6994792 7012344 6994792 7012344 - transcript612.chr17.nnic@ALOX12-AS1 transcript612.chr17.nnic antisense_RNA 7012196,7009796,7002484,6994792 7012344,7009889,7002620,6997081 Gene ID= ENSG00000215067.9 TPM= 2.72 Transcript Type= NA chr17 7012632 7014532 7012632 7014532 + ENST00000552039.2@RNASEK ENST00000552039.2 protein_coding 7012632,7013666,7014145 7012757,7013742,7014532 Gene ID= ENSG00000219200.11 TPM= 489.45 Transcript Type= protein_coding chr17 7012646 7014532 7012646 7014532 + ENST00000552176.2@RNASEK ENST00000552176.2 protein_coding 7012646,7014145 7013742,7014532 Gene ID= ENSG00000219200.11 TPM= 9.06 Transcript Type= retained_intron chr17 7013231 7014520 7013231 7014520 + ENST00000552321.2@RNASEK ENST00000552321.2 protein_coding 7013231,7013666,7014145 7013516,7013742,7014520 Gene ID= ENSG00000219200.11 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr17 7012660 7017520 7012660 7017520 + ENST00000547863.5@RNASEK-C17orf49 ENST00000547863.5 protein_coding 7012660,7013666,7014145,7015062,7015774,7016495,7016910,7017261 7012757,7013742,7014878,7015156,7015875,7016685,7017014,7017520 Gene ID= ENSG00000161939.19 TPM= 13.88 Transcript Type= retained_intron chr17 7014066 7019664 7014066 7019664 - transcript626.chr17.nnic@MIR497HG transcript626.chr17.nnic antisense_RNA 7019378,7017069,7015931,7014066 7019664,7017388,7016014,7015228 Gene ID= ENSG00000267532.5 TPM= 1.81 Transcript Type= NA chr17 7015818 7019630 7015818 7019630 - ENST00000443997.1@MIR497HG ENST00000443997.1 antisense_RNA 7019378,7017069,7015818 7019630,7017388,7016014 Gene ID= ENSG00000267532.5 TPM= 10.87 Transcript Type= antisense_RNA chr17 7015059 7017522 7015059 7017522 + transcript630.chr17.nic@C17orf49 transcript630.chr17.nic protein_coding 7015059,7016495,7016910,7017261 7015156,7016685,7017014,7017522 Gene ID= ENSG00000258315.5 TPM= 2.11 Transcript Type= NA chr17 7014753 7017506 7014753 7017506 + ENST00000546760.5@C17orf49 ENST00000546760.5 protein_coding 7014753,7015062,7015774,7016495,7017257 7014878,7015156,7015875,7016685,7017506 Gene ID= ENSG00000258315.5 TPM= 3.62 Transcript Type= protein_coding chr17 7014782 7017520 7014782 7017520 + ENST00000439424.6@C17orf49 ENST00000439424.6 protein_coding 7014782,7015062,7015774,7016495,7016910,7017261 7014878,7015156,7015875,7016685,7017014,7017520 Gene ID= ENSG00000258315.5 TPM= 29.28 Transcript Type= protein_coding chr17 7023020 7029642 7023020 7029642 + ENST00000293805.9@BCL6B ENST00000293805.9 protein_coding 7023020,7023660,7024083,7024401,7025076,7026457,7026705,7026950,7027503 7023099,7023850,7024304,7024763,7025200,7026621,7026835,7027087,7029642 Gene ID= ENSG00000161940.10 TPM= 6.79 Transcript Type= protein_coding chr17 7023093 7029646 7023093 7029646 + transcript641.chr17.nic@BCL6B transcript641.chr17.nic protein_coding 7023093,7024083,7024401,7025076,7026457,7026705,7026950,7027503 7023850,7024304,7024763,7025200,7026621,7026835,7027087,7029646 Gene ID= ENSG00000161940.10 TPM= 3.17 Transcript Type= NA chr17 7219867 7225267 7219867 7225267 + transcript697.chr17.nic@ACADVL transcript697.chr17.nic protein_coding 7219867,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222667,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957 7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222302,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225267 Gene ID= ENSG00000072778.19 TPM= 161.33 Transcript Type= NA chr17 7219878 7225269 7219878 7225269 + transcript717.chr17.nic@ACADVL transcript717.chr17.nic protein_coding 7219878,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957 7220046,7220197,7220529,7220676,7220830,7221058,7221682,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225269 Gene ID= ENSG00000072778.19 TPM= 189.46 Transcript Type= NA chr17 7219806 7225273 7219806 7225273 + ENST00000356839.9@ACADVL ENST00000356839.9 protein_coding 7219806,7220122,7220464,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957 7220046,7220197,7220529,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225273 Gene ID= ENSG00000072778.19 TPM= 2084.73 Transcript Type= protein_coding chr17 7219863 7225264 7219863 7225264 + ENST00000350303.9@ACADVL ENST00000350303.9 protein_coding 7219863,7220122,7220604,7220766,7220924,7221538,7221952,7222177,7222667,7223133,7223644,7223813,7223968,7224146,7224321,7224480,7224642,7224809,7224957 7220046,7220197,7220676,7220830,7221058,7221682,7222081,7222302,7222865,7223237,7223730,7223875,7224069,7224243,7224393,7224552,7224714,7224884,7225264 Gene ID= ENSG00000072778.19 TPM= 17.82 Transcript Type= protein_coding chr17 7225341 7234545 7225341 7234545 - transcript735.chr17.nnic@DVL2 transcript735.chr17.nnic protein_coding 7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7227090,7226893,7226421,7225341 7234545,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226958,7226639,7226313 Gene ID= ENSG00000004975.11 TPM= 4.79 Transcript Type= NA chr17 7225341 7234545 7225341 7234545 - ENST00000005340.9@DVL2 ENST00000005340.9 protein_coding 7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7227090,7226421,7225341 7234545,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226639,7226313 Gene ID= ENSG00000004975.11 TPM= 85.38 Transcript Type= protein_coding chr17 7225341 7234545 7225341 7234545 - transcript761.chr17.nic@DVL2 transcript761.chr17.nic protein_coding 7234069,7230728,7230285,7230046,7229808,7229588,7229378,7229135,7228969,7227977,7227655,7227404,7226421,7225341 7234545,7230797,7230430,7230155,7229943,7229678,7229447,7229274,7229045,7228044,7227783,7227535,7227269,7226313 Gene ID= ENSG00000004975.11 TPM= 3.88 Transcript Type= NA chr17 7235029 7238294 7235029 7238294 - transcript792.chr17.nic@PHF23 transcript792.chr17.nic protein_coding 7238053,7237629,7237385,7235930,7235029 7238294,7237660,7237477,7236767,7235840 Gene ID= ENSG00000040633.12 TPM= 7.15 Transcript Type= NA chr17 7235029 7238572 7235029 7238572 - transcript794.chr17.nic@PHF23 transcript794.chr17.nic protein_coding 7238455,7237629,7237385,7235930,7235029 7238572,7237660,7237477,7236767,7235840 Gene ID= ENSG00000040633.12 TPM= 7.15 Transcript Type= NA chr17 7235029 7239439 7235029 7239439 - ENST00000571362.5@PHF23 ENST00000571362.5 protein_coding 7239246,7237629,7237385,7235930,7235029 7239439,7237660,7237477,7236566,7235840 Gene ID= ENSG00000040633.12 TPM= 6.7 Transcript Type= protein_coding chr17 7235028 7239506 7235028 7239506 - ENST00000320316.7@PHF23 ENST00000320316.7 protein_coding 7239246,7237629,7237385,7235930,7235028 7239506,7237660,7237477,7236767,7235840 Gene ID= ENSG00000040633.12 TPM= 80.5 Transcript Type= protein_coding chr17 7240408 7241819 7240408 7241819 - ENST00000577035.5@GABARAP ENST00000577035.5 protein_coding 7241768,7241601,7241342,7240408 7241819,7241679,7241460,7240919 Gene ID= ENSG00000170296.9 TPM= 19.77 Transcript Type= protein_coding chr17 7243593 7252115 7243593 7252115 - transcript804.chr17.nnic@CTDNEP1 transcript804.chr17.nnic protein_coding 7251195,7247277,7247064,7246791,7246254,7246026,7245215,7244551,7243593 7252115,7247343,7247182,7246862,7246370,7246137,7245284,7244635,7244245 Gene ID= ENSG00000175826.11 TPM= 1.81 Transcript Type= NA chr17 7243591 7251675 7243591 7251675 - ENST00000574322.5@CTDNEP1 ENST00000574322.5 protein_coding 7251195,7247277,7247064,7246791,7246254,7246026,7244551,7243591 7251675,7247343,7247182,7246862,7246370,7246137,7244635,7244245 Gene ID= ENSG00000175826.11 TPM= 23.54 Transcript Type= protein_coding chr17 7252599 7259931 7252599 7259931 + transcript817.chr17.nic@ELP5 transcript817.chr17.nic protein_coding 7252599,7252918,7254583,7256857,7258588,7258826,7259571 7252830,7252998,7254803,7257038,7258683,7258926,7259931 Gene ID= ENSG00000170291.14 TPM= 5.13 Transcript Type= NA chr17 7252599 7259931 7252599 7259931 + transcript823.chr17.nic@ELP5 transcript823.chr17.nic protein_coding 7252599,7252918,7254583,7256857,7258588 7252830,7252998,7254803,7257038,7259931 Gene ID= ENSG00000170291.14 TPM= 1.81 Transcript Type= NA chr17 7252056 7254913 7252056 7254913 + ENST00000574255.5@ELP5 ENST00000574255.5 protein_coding 7252056,7252426,7252770,7252918,7254583 7252082,7252596,7252830,7252998,7254913 Gene ID= ENSG00000170291.14 TPM= 10.87 Transcript Type= protein_coding chr17 7252053 7259931 7252053 7259931 + ENST00000354429.6@ELP5 ENST00000354429.6 protein_coding 7252053,7252426,7252770,7252918,7254583,7256857,7258588,7258826,7259571 7252082,7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259931 Gene ID= ENSG00000170291.14 TPM= 12.83 Transcript Type= protein_coding chr17 7252286 7259940 7252286 7259940 + ENST00000574993.5@ELP5 ENST00000574993.5 protein_coding 7252286,7252770,7252918,7254583,7256857,7258588 7252596,7252830,7252998,7254803,7257038,7259940 Gene ID= ENSG00000170291.14 TPM= 10.87 Transcript Type= protein_coding chr17 7252286 7259940 7252286 7259940 + ENST00000396628.6@ELP5 ENST00000396628.6 protein_coding 7252286,7252770,7252918,7254583,7256857,7258588,7258826,7259571 7252596,7252830,7252998,7254803,7257038,7258683,7258926,7259940 Gene ID= ENSG00000170291.14 TPM= 15.55 Transcript Type= protein_coding chr17 7252525 7259940 7252525 7259940 + ENST00000570322.5@ELP5 ENST00000570322.5 protein_coding 7252525,7252770,7252918,7254583,7256857,7258588,7259571 7252596,7252830,7252998,7254803,7257038,7258683,7259940 Gene ID= ENSG00000170291.14 TPM= 1.81 Transcript Type= protein_coding chr17 7281667 7288257 7281667 7288257 + ENST00000317370.12@SLC2A4 ENST00000317370.12 protein_coding 7281667,7283245,7283473,7283738,7283974,7284217,7284485,7284835,7285088,7285705,7286426 7281967,7283361,7283645,7283862,7284089,7284379,7284672,7284939,7285189,7285908,7288257 Gene ID= ENSG00000181856.14 TPM= 18.11 Transcript Type= protein_coding chr17 7306999 7312463 7306999 7312463 + ENST00000336452.11@EIF5A ENST00000336452.11 protein_coding 7306999,7309615,7311018,7311350,7311578,7311822 7307115,7309800,7311122,7311481,7311651,7312463 Gene ID= ENSG00000132507.17 TPM= 18.72 Transcript Type= protein_coding chr17 7307974 7312455 7307974 7312455 + ENST00000419711.6@EIF5A ENST00000419711.6 protein_coding 7307974,7309615,7311018,7311350,7311578,7311822 7308113,7309800,7311122,7311481,7311651,7312455 Gene ID= ENSG00000132507.17 TPM= 21.43 Transcript Type= protein_coding chr17 7312655 7315356 7312655 7315356 - transcript845.chr17.nic@GPS2 transcript845.chr17.nic protein_coding 7315252,7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312655 7315356,7315119,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839 Gene ID= ENSG00000132522.15 TPM= 8.3 Transcript Type= NA chr17 7312660 7315343 7312660 7315343 - ENST00000389167.9@GPS2 ENST00000389167.9 protein_coding 7314959,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312660 7315343,7314597,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839 Gene ID= ENSG00000132522.15 TPM= 41.2 Transcript Type= protein_coding chr17 7312659 7315328 7312659 7315328 - ENST00000571569.5@GPS2 ENST00000571569.5 protein_coding 7315252,7314488,7314291,7314080,7313906,7313568,7313380,7313212,7313029,7312659 7315328,7315119,7314403,7314159,7313988,7313721,7313469,7313291,7313124,7312839 Gene ID= ENSG00000132522.15 TPM= 3.78 Transcript Type= retained_intron chr17 7312659 7315321 7312659 7315321 - ENST00000572172.5@GPS2 ENST00000572172.5 protein_coding 7314959,7314488,7314291,7314080,7313568,7313380,7313212,7313029,7312659 7315321,7314597,7314403,7314159,7313988,7313469,7313291,7313124,7312839 Gene ID= ENSG00000132522.15 TPM= 5.59 Transcript Type= retained_intron chr17 7315628 7329328 7315628 7329328 - ENST00000399464.6@NEURL4 ENST00000399464.6 protein_coding 7329031,7327440,7327165,7326711,7326437,7326255,7325641,7325209,7324799,7324395,7324108,7323814,7323647,7323485,7322948,7322735,7321865,7321560,7321361,7321112,7320759,7319050,7318495,7318269,7318065,7317788,7317461,7317205,7315628 7329328,7327884,7327230,7327009,7326548,7326343,7325713,7325473,7324980,7324480,7324270,7324012,7323723,7323563,7323123,7322866,7322010,7321787,7321459,7321273,7320923,7319208,7318674,7318356,7318172,7317932,7317573,7317370,7316327 Gene ID= ENSG00000215041.9 TPM= 9.06 Transcript Type= protein_coding chr17 7336529 7351478 7336529 7351478 + ENST00000158762.7@ACAP1 ENST00000158762.7 protein_coding 7336529,7337312,7341948,7342275,7342416,7343379,7343706,7343861,7344049,7344539,7346244,7346391,7346808,7347031,7347922,7348127,7348306,7348995,7349945,7350127,7350950,7351295 7336787,7337369,7342067,7342328,7342474,7343562,7343750,7343956,7344123,7344648,7346295,7346491,7346931,7347242,7347991,7348221,7348475,7349167,7350054,7350237,7350999,7351478 Gene ID= ENSG00000072818.11 TPM= 1.36 Transcript Type= protein_coding chr17 7336529 7351478 7336529 7351478 + transcript865.chr17.nic@ACAP1 transcript865.chr17.nic protein_coding 7336529,7337312,7341948,7342275,7342416,7343706,7343861,7344049,7344539,7346244,7346391,7346808,7347031,7347922,7348127,7348306,7348995,7349945,7350127,7350950,7351295 7336787,7337369,7342067,7342328,7343562,7343750,7343956,7344123,7344648,7346295,7346491,7346931,7347242,7347991,7348221,7348475,7349167,7350054,7350237,7350999,7351478 Gene ID= ENSG00000072818.11 TPM= 2.26 Transcript Type= NA chr17 7350317 7351476 7350317 7351476 + ENST00000571471.5@ACAP1 ENST00000571471.5 protein_coding 7350317,7350950,7351295 7350404,7350999,7351476 Gene ID= ENSG00000072818.11 TPM= 4.53 Transcript Type= protein_coding chr17 7380534 7389774 7380534 7389774 + ENST00000570896.5@TNK1 ENST00000570896.5 protein_coding 7380534,7380974,7382836,7383250,7383425,7383709,7383970,7384484,7386561,7386990,7387378,7388406,7388788,7388971 7380747,7381114,7383089,7383320,7383616,7383864,7384253,7384754,7386655,7387154,7387457,7388704,7388883,7389774 Gene ID= ENSG00000174292.12 TPM= 2.72 Transcript Type= protein_coding chr17 7389730 7394843 7389730 7394843 - ENST00000535512.5@PLSCR3 ENST00000535512.5 protein_coding 7394477,7394104,7393601,7393467,7393144,7392791,7390634,7389730 7394843,7394267,7393836,7393509,7393364,7392952,7390795,7390441 Gene ID= ENSG00000187838.16 TPM= 49.8 Transcript Type= protein_coding chr17 7389727 7394570 7389727 7394570 - ENST00000324822.15@PLSCR3 ENST00000324822.15 protein_coding 7394477,7394104,7393601,7393467,7393144,7392791,7390634,7389727 7394570,7394159,7393836,7393509,7393364,7392952,7390795,7390441 Gene ID= ENSG00000187838.16 TPM= 14.49 Transcript Type= protein_coding chr17 7402954 7404136 7402954 7404136 - transcript882.chr17.nnic@TMEM256 transcript882.chr17.nnic protein_coding 7404000,7403613,7403310,7402954 7404136,7403689,7403390,7403209 Gene ID= ENSG00000205544.3 TPM= 3.62 Transcript Type= NA chr17 7402975 7404137 7402975 7404137 - ENST00000302422.3@TMEM256 ENST00000302422.3 protein_coding 7404000,7403658,7403310,7402975 7404137,7403689,7403390,7403209 Gene ID= ENSG00000205544.3 TPM= 50.71 Transcript Type= protein_coding chr17 7435454 7437523 7435454 7437523 + ENST00000396568.1@TMEM102 ENST00000396568.1 protein_coding 7435454,7436194 7436085,7437523 Gene ID= ENSG00000181284.2 TPM= 24.45 Transcript Type= protein_coding chr17 7445047 7457611 7445047 7457611 + transcript889.chr17.nic@CHRNB1 transcript889.chr17.nic protein_coding 7445047,7445270,7446069,7446833,7447043,7447503,7454297,7455284,7455794,7456583 7445185,7445409,7446113,7446942,7447151,7447650,7454520,7455456,7455941,7457611 Gene ID= ENSG00000170175.10 TPM= 2.72 Transcript Type= NA chr17 7445477 7457728 7445477 7457728 + transcript891.chr17.nic@CHRNB1 transcript891.chr17.nic protein_coding 7445477,7446069,7446833,7447043,7447503,7448579,7454297,7455284,7456583 7445614,7446113,7446942,7447151,7447650,7448788,7454520,7455941,7457728 Gene ID= ENSG00000170175.10 TPM= 18.11 Transcript Type= NA chr17 7445477 7457613 7445477 7457613 + transcript892.chr17.nic@CHRNB1 transcript892.chr17.nic protein_coding 7445477,7446069,7446833,7447043,7447503,7454297,7455284,7455794,7456583 7445614,7446113,7446942,7447151,7447650,7454520,7455456,7455941,7457613 Gene ID= ENSG00000170175.10 TPM= 3.62 Transcript Type= NA chr17 7445061 7457707 7445061 7457707 + ENST00000306071.6@CHRNB1 ENST00000306071.6 protein_coding 7445061,7445270,7446069,7446833,7447043,7447503,7448579,7454297,7455284,7455794,7456583 7445185,7445409,7446113,7446942,7447151,7447650,7448788,7454520,7455456,7455941,7457707 Gene ID= ENSG00000170175.10 TPM= 28.07 Transcript Type= protein_coding chr17 7459366 7484263 7459366 7484263 - ENST00000311403.4@ZBTB4 ENST00000311403.4 protein_coding 7484004,7467257,7465711,7459366 7484263,7467327,7466810,7463890 Gene ID= ENSG00000174282.11 TPM= 21.73 Transcript Type= protein_coding chr17 7459366 7479625 7459366 7479625 - ENST00000380599.8@ZBTB4 ENST00000380599.8 protein_coding 7479456,7467257,7465711,7459366 7479625,7467327,7466810,7463890 Gene ID= ENSG00000174282.11 TPM= 39.84 Transcript Type= protein_coding chr17 7484366 7514616 7484366 7514616 + ENST00000617998.4@POLR2A ENST00000617998.4 protein_coding 7484366,7495941,7496210,7496440,7496764,7497356,7497650,7498078,7499039,7499281,7500639,7500940,7501289,7501526,7501900,7502518,7503121,7503385,7503586,7508251,7508944,7509532,7511215,7511406,7511811,7512158,7512477,7512774,7513021 7484857,7496073,7496346,7496613,7497045,7497517,7497870,7498210,7499163,7499491,7500848,7501108,7501383,7501729,7502122,7502701,7503292,7503490,7503791,7508475,7509190,7509632,7511319,7511588,7512014,7512344,7512590,7512923,7514616 Gene ID= ENSG00000181222.15 TPM= 9.06 Transcript Type= processed_transcript chr17 7548891 7557890 7548891 7557890 + ENST00000293825.10@TNFSF12 ENST00000293825.10 protein_coding 7548891,7549474,7550120,7550799,7550943,7556778,7557099 7549312,7549521,7550195,7550852,7550978,7556902,7557890 Gene ID= ENSG00000239697.10 TPM= 47.54 Transcript Type= protein_coding chr17 7549058 7557890 7549058 7557890 + ENST00000322272.11@TNFSF12 ENST00000322272.11 protein_coding 7549058,7549474,7550120,7550799,7550943,7553587,7556778,7557099 7549312,7549521,7550195,7550852,7550978,7553825,7556902,7557890 Gene ID= ENSG00000239697.10 TPM= 4.98 Transcript Type= nonsense_mediated_decay chr17 7558186 7561602 7558186 7561602 + transcript926.chr17.nnic@TNFSF12-TNFSF13 transcript926.chr17.nnic protein_coding 7558186,7559624,7559846,7560049,7560350,7560724 7558375,7559702,7559893,7560167,7560488,7561602 Gene ID= ENSG00000248871.1 TPM= 2.42 Transcript Type= NA chr17 7558282 7561602 7558282 7561602 + transcript921.chr17.nic@TNFSF13 transcript921.chr17.nic protein_coding 7558282,7559068,7559624,7559846,7560049,7560350,7560724 7558375,7559297,7559702,7559893,7560167,7560488,7561602 Gene ID= ENSG00000161955.16 TPM= 4.68 Transcript Type= NA chr17 7558726 7561602 7558726 7561602 + transcript925.chr17.nnic@TNFSF13 transcript925.chr17.nnic protein_coding 7558726,7558898,7559624,7559846,7560049,7560350,7560724 7558798,7559297,7559702,7559893,7560167,7560488,7561602 Gene ID= ENSG00000161955.16 TPM= 20.08 Transcript Type= NA chr17 7558292 7561608 7558292 7561608 + ENST00000380535.8@TNFSF13 ENST00000380535.8 protein_coding 7558292,7559848,7560049,7560350,7560724 7559297,7559893,7560167,7560488,7561608 Gene ID= ENSG00000161955.16 TPM= 2.72 Transcript Type= protein_coding chr17 7561875 7571969 7561875 7571969 + ENST00000321337.11@SENP3 ENST00000321337.11 protein_coding 7561875,7563066,7564625,7564959,7565440,7565717,7566927,7570356,7570681,7570883,7571373 7562263,7563791,7564864,7565070,7565587,7565764,7567004,7570493,7570764,7570933,7571969 Gene ID= ENSG00000161956.12 TPM= 34.41 Transcript Type= protein_coding chr17 7572826 7579005 7572826 7579005 + ENST00000293831.12@EIF4A1 ENST00000293831.12 protein_coding 7572826,7574260,7574546,7575119,7576524,7577056,7577344,7577569,7577827,7578165,7578342 7572864,7574308,7574678,7575258,7576692,7577165,7577487,7577706,7577916,7578244,7579005 Gene ID= ENSG00000161960.14 TPM= 599.17 Transcript Type= protein_coding chr17 7579467 7582113 7579467 7582113 + ENST00000250092.10@CD68 ENST00000250092.10 protein_coding 7579467,7579810,7580466,7580711,7580896,7581378 7579726,7580327,7580585,7580783,7581066,7582113 Gene ID= ENSG00000129226.13 TPM= 252.65 Transcript Type= protein_coding chr17 7579491 7582111 7579491 7582111 + ENST00000380498.10@CD68 ENST00000380498.10 protein_coding 7579491,7579891,7580466,7580711,7580896,7581378 7579726,7580327,7580585,7580783,7581066,7582111 Gene ID= ENSG00000129226.13 TPM= 26.26 Transcript Type= protein_coding chr17 7581964 7584072 7581964 7584072 - ENST00000415124.1@AC016876.1 ENST00000415124.1 antisense_RNA 7583918,7581964 7584072,7582160 Gene ID= ENSG00000233223.2 TPM= 1.81 Transcript Type= antisense_RNA chr17 7591230 7614897 7591230 7614897 - transcript980.chr17.nic@FXR2 transcript980.chr17.nic protein_coding 7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7592071,7591230 7614897,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7592157,7591925 Gene ID= ENSG00000129245.11 TPM= 7.24 Transcript Type= NA chr17 7591230 7615049 7591230 7615049 - transcript986.chr17.nic@FXR2 transcript986.chr17.nic protein_coding 7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7591230 7615049,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7592157 Gene ID= ENSG00000129245.11 TPM= 5.43 Transcript Type= NA chr17 7591230 7614867 7591230 7614867 - ENST00000250113.11@FXR2 ENST00000250113.11 protein_coding 7614452,7606097,7605645,7604009,7603757,7602909,7601409,7595824,7594679,7594238,7593918,7593403,7592984,7592694,7592504,7592254,7591230 7614867,7606149,7605738,7604080,7603905,7603002,7601525,7595994,7594757,7594347,7594004,7593625,7593181,7592894,7592599,7592354,7591925 Gene ID= ENSG00000129245.11 TPM= 124.06 Transcript Type= protein_coding chr17 7626238 7627867 7626238 7627867 - transcript1002.chr17.nic@SAT2 transcript1002.chr17.nic protein_coding 7627143,7626943,7626753,7626238 7627867,7627044,7626793,7626614 Gene ID= ENSG00000141504.11 TPM= 9.06 Transcript Type= NA chr17 7626234 7627855 7626234 7627855 - ENST00000269298.9@SAT2 ENST00000269298.9 protein_coding 7627570,7627363,7627143,7626943,7626753,7626234 7627855,7627414,7627226,7627044,7626793,7626614 Gene ID= ENSG00000141504.11 TPM= 42.56 Transcript Type= protein_coding chr17 7686301 7703502 7686301 7703502 + ENST00000316024.9@WRAP53 ENST00000316024.9 protein_coding 7686301,7689224,7689590,7700741,7701459,7701657,7702344,7702743,7702993,7703243 7689079,7689322,7689701,7700829,7701549,7701789,7702552,7702846,7703127,7703502 Gene ID= ENSG00000141499.16 TPM= 1.81 Transcript Type= protein_coding chr17 7705202 7711378 7705202 7711378 + ENST00000226091.2@EFNB3 ENST00000226091.2 protein_coding 7705202,7707958,7708435,7708635,7709167 7705720,7708250,7708527,7708739,7711378 Gene ID= ENSG00000108947.4 TPM= 3.62 Transcript Type= protein_coding chr17 7848922 7854788 7848922 7854788 + transcript1010.chr17.nic@KDM6B transcript1010.chr17.nic protein_coding 7848922,7849821,7850072,7851021,7851330,7851478,7851648,7851951,7852149,7852495,7853000,7853210,7853498 7849728,7849947,7850177,7851226,7851394,7851549,7851796,7852065,7852336,7852636,7853126,7853380,7854788 Gene ID= ENSG00000132510.10 TPM= 2.72 Transcript Type= NA chr17 7855065 7856099 7855065 7856099 + ENST00000301599.6@TMEM88 ENST00000301599.6 protein_coding 7855065,7855445 7855284,7856099 Gene ID= ENSG00000167874.6 TPM= 10.87 Transcript Type= protein_coding chr17 7855066 7856061 7855066 7856061 + ENST00000574668.1@TMEM88 ENST00000574668.1 protein_coding 7855066,7855771 7855284,7856061 Gene ID= ENSG00000167874.6 TPM= 6.34 Transcript Type= protein_coding chr17 7856686 7885410 7856686 7885410 - transcript1017.chr17.nnic@NAA38 transcript1017.chr17.nnic protein_coding 7885165,7883235,7857015,7856686 7885410,7883335,7857198,7856843 Gene ID= ENSG00000183011.13 TPM= 25.81 Transcript Type= NA chr17 7856685 7857854 7856685 7857854 - ENST00000333775.9@NAA38 ENST00000333775.9 protein_coding 7857015,7856685 7857854,7856843 Gene ID= ENSG00000183011.13 TPM= 56.6 Transcript Type= protein_coding chr17 7856685 7857562 7856685 7857562 - ENST00000575071.5@NAA38 ENST00000575071.5 protein_coding 7857383,7856985,7856685 7857562,7857198,7856843 Gene ID= ENSG00000183011.13 TPM= 7.24 Transcript Type= protein_coding chr17 7857681 7862281 7857681 7862281 + transcript1021.chr17.nic@CYB5D1 transcript1021.chr17.nic protein_coding 7857681,7858403,7858606 7858294,7858479,7862281 Gene ID= ENSG00000182224.11 TPM= 3.17 Transcript Type= NA chr17 7857983 7862282 7857983 7862282 + ENST00000332439.4@CYB5D1 ENST00000332439.4 protein_coding 7857983,7858403,7858606,7859382 7858294,7858479,7858824,7862282 Gene ID= ENSG00000182224.11 TPM= 7.7 Transcript Type= protein_coding chr17 7884782 7912757 7884782 7912757 + transcript1014.chr17.nic@CHD3 transcript1014.chr17.nic protein_coding 7884782,7889664,7890571,7890940,7893286,7893805,7894127,7894415,7894917,7895339,7897083,7897971,7898496,7899011,7899343,7899896,7900290,7900558,7900852,7901244,7902610,7902937,7903272,7903825,7904442,7905100,7905621,7905856,7906553,7906869,7907126,7907353,7907601,7907894,7908402,7908697,7909143,7910428,7910847,7911464 7885083,7889776,7890741,7891064,7893569,7893935,7894265,7894608,7895150,7895542,7897294,7898102,7898595,7899202,7899543,7900033,7900411,7900731,7900993,7901375,7902727,7903061,7903503,7903991,7904619,7905165,7905706,7905989,7906697,7907031,7907247,7907488,7907702,7908019,7908510,7908829,7909338,7910591,7910973,7912757 Gene ID= ENSG00000170004.16 TPM= 25.36 Transcript Type= NA chr17 7930349 7931945 7930349 7931945 - ENST00000303731.8@TRAPPC1 ENST00000303731.8 protein_coding 7931731,7931506,7931011,7930349 7931945,7931576,7931149,7930734 Gene ID= ENSG00000170043.11 TPM= 53.88 Transcript Type= protein_coding chr17 7930345 7931999 7930345 7931999 - ENST00000540486.5@TRAPPC1 ENST00000540486.5 protein_coding 7931940,7931731,7931506,7931011,7930345 7931999,7931829,7931576,7931149,7930734 Gene ID= ENSG00000170043.11 TPM= 21.28 Transcript Type= protein_coding chr17 7932101 7949582 7932101 7949582 + transcript1030.chr17.nnic@CNTROB transcript1030.chr17.nnic protein_coding 7932101,7932805,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385 7932138,7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949582 Gene ID= ENSG00000170037.13 TPM= 2.42 Transcript Type= NA chr17 7932165 7949582 7932165 7949582 + transcript1035.chr17.nic@CNTROB transcript1035.chr17.nic protein_coding 7932165,7932928,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385 7932800,7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949582 Gene ID= ENSG00000170037.13 TPM= 3.32 Transcript Type= NA chr17 7932155 7949578 7932155 7949578 + ENST00000563694.5@CNTROB ENST00000563694.5 protein_coding 7932155,7934138,7934465,7934989,7936366,7936701,7937164,7939513,7940096,7943391,7944123,7944476,7945728,7947571,7947916,7948157,7948487,7949085,7949385 7933349,7934222,7934546,7935145,7936482,7936817,7937262,7939749,7940242,7943524,7944248,7944638,7945986,7947722,7947979,7948327,7948619,7949157,7949578 Gene ID= ENSG00000170037.13 TPM= 27.77 Transcript Type= protein_coding chr17 8039040 8049110 8039040 8049110 + ENST00000380173.6@ALOX15B ENST00000380173.6 protein_coding 8039040,8039386,8039902,8042369,8042781,8044829,8045238,8045483,8046907,8047258,8047564,8047745,8048386 8039302,8039605,8039983,8042491,8042884,8045001,8045384,8045686,8047076,8047379,8047664,8047915,8049110 Gene ID= ENSG00000179593.15 TPM= 1.81 Transcript Type= protein_coding chr17 8140472 8152435 8140472 8152435 - ENST00000317276.8@PER1 ENST00000317276.8 protein_coding 8152337,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145958,8144751,8143266,8142649,8142269,8141805,8140472 8152435,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137,8144993,8143876,8142835,8142458,8141955,8141340 Gene ID= ENSG00000179094.15 TPM= 17.66 Transcript Type= protein_coding chr17 8140468 8156359 8140468 8156359 - transcript1046.chr17.nic@PER1 transcript1046.chr17.nic protein_coding 8156307,8150432,8150219,8149971,8149755,8149462,8149259,8148644,8148181,8147997,8147674,8147470,8147250,8146897,8146594,8146372,8145958,8144751,8143266,8142649,8142269,8141805,8140468 8156359,8150845,8150317,8150125,8149876,8149663,8149310,8148786,8148259,8148103,8147827,8147578,8147381,8147002,8146765,8146502,8146137,8144993,8143876,8142835,8142458,8141955,8141340 Gene ID= ENSG00000179094.15 TPM= 20.37 Transcript Type= NA chr17 8159149 8162975 8159149 8162975 - ENST00000316509.10@VAMP2 ENST00000316509.10 protein_coding 8162878,8162249,8161608,8161473,8159149 8162975,8162369,8161766,8161524,8160871 Gene ID= ENSG00000220205.8 TPM= 91.46 Transcript Type= protein_coding chr17 8172441 8176414 8172441 8176414 - transcript1058.chr17.nic@TMEM107 transcript1058.chr17.nic protein_coding 8176200,8175959,8175757,8174541,8172441 8176414,8176026,8175857,8174616,8174272 Gene ID= ENSG00000179029.14 TPM= 5.43 Transcript Type= NA chr17 8173967 8176374 8173967 8176374 - ENST00000437139.6@TMEM107 ENST00000437139.6 protein_coding 8176200,8175959,8175757,8174520,8173967 8176374,8176026,8175857,8174616,8174272 Gene ID= ENSG00000179029.14 TPM= 6.34 Transcript Type= protein_coding chr17 8196222 8211552 8196222 8211552 + transcript1066.chr17.nnic@NA transcript1066.chr17.nnic NA 8196222,8207181,8209224 8196473,8208199,8211552 Gene ID= novel_gene_chr17_1067 TPM= 1.81 Transcript Type= NA chr17 8204733 8210582 8204733 8210582 - ENST00000316199.10@AURKB ENST00000316199.10 protein_coding 8210530,8210177,8207738,8207571,8207176,8206750,8206491,8205216,8204733 8210582,8210249,8207840,8207625,8207370,8206888,8206639,8205390,8205044 Gene ID= ENSG00000178999.12 TPM= 1.81 Transcript Type= protein_coding chr17 8220642 8224043 8220642 8224043 - ENST00000315707.3@LINC00324 ENST00000315707.3 lincRNA 8223812,8222293,8220642 8224043,8223274,8221509 Gene ID= ENSG00000178977.3 TPM= 3.62 Transcript Type= lincRNA chr17 8227819 8248058 8227819 8248058 - transcript1071.chr17.nnic@CTC1 transcript1071.chr17.nnic protein_coding 8248004,8242985,8238392,8238031,8237375,8236058,8235831,8235053,8234749,8234455,8232906,8232361,8231903,8231726,8231276,8230563,8230294,8229891,8229302,8229142,8228727,8228503,8227819 8248058,8243148,8238629,8238242,8237519,8236342,8235959,8235285,8234926,8234655,8233032,8232475,8232227,8231815,8231469,8230651,8230468,8229968,8229446,8229218,8228892,8228629,8228319 Gene ID= ENSG00000178971.13 TPM= 3.62 Transcript Type= NA chr17 8227818 8248058 8227818 8248058 - transcript1075.chr17.nnic@CTC1 transcript1075.chr17.nnic protein_coding 8248004,8242985,8238392,8238031,8237375,8236058,8235831,8235053,8234749,8234455,8232906,8232361,8231903,8231726,8231276,8230563,8230294,8229891,8229302,8229142,8228503,8227818 8248058,8243148,8238629,8238242,8237414,8236342,8235959,8235285,8234926,8234655,8233032,8232475,8232227,8231815,8231469,8230651,8230468,8229968,8229446,8229206,8228629,8228319 Gene ID= ENSG00000178971.13 TPM= 1.81 Transcript Type= NA chr17 8227821 8248058 8227821 8248058 - transcript1077.chr17.nic@CTC1 transcript1077.chr17.nic protein_coding 8248004,8242985,8238392,8238031,8237375,8236058,8235831,8235053,8234749,8234455,8232361,8231903,8231726,8231276,8230563,8229891,8228727,8228503,8227821 8248058,8243148,8238629,8238242,8237519,8236342,8235959,8235285,8234926,8234655,8233032,8232227,8231815,8231469,8230651,8230468,8229446,8228629,8228319 Gene ID= ENSG00000178971.13 TPM= 2.72 Transcript Type= NA chr17 8249278 8270490 8249278 8270490 + transcript1081.chr17.nic@PFAS transcript1081.chr17.nic protein_coding 8249278,8253859,8254166,8255027,8255502,8255805,8256267,8256524,8256835,8257807,8258071,8262920,8263109,8263575,8263775,8264212,8264470,8264895,8265288,8265556,8265862,8266234,8266753,8267028,8267372,8267551,8268533 8249339,8254079,8254301,8255132,8255691,8255910,8256407,8256648,8256963,8257938,8258199,8262993,8263265,8263636,8263936,8264337,8264601,8265125,8265468,8265639,8266017,8266353,8266898,8267235,8267463,8267665,8270490 Gene ID= ENSG00000178921.13 TPM= 2.26 Transcript Type= NA chr17 8249286 8270485 8249286 8270485 + ENST00000314666.10@PFAS ENST00000314666.10 protein_coding 8249286,8253859,8254166,8255027,8255502,8255805,8256267,8256524,8256835,8257807,8258071,8262920,8263109,8263575,8263775,8264212,8264470,8264895,8265288,8265556,8265862,8266234,8266753,8267028,8267372,8267551,8268533,8268954 8249339,8254079,8254301,8255132,8255691,8255910,8256407,8256648,8256963,8257938,8258199,8262993,8263265,8263636,8263936,8264337,8264601,8265125,8265468,8265639,8266017,8266353,8266898,8267235,8267463,8267665,8268856,8270485 Gene ID= ENSG00000178921.13 TPM= 14.94 Transcript Type= protein_coding chr17 8290059 8295318 8290059 8295318 - ENST00000577745.1@SLC25A35 ENST00000577745.1 protein_coding 8294433,8292523,8291333,8290842,8290059 8295318,8292588,8291485,8290976,8290678 Gene ID= ENSG00000125434.10 TPM= 3.62 Transcript Type= protein_coding chr17 8288497 8290092 8288497 8290092 + ENST00000226105.10@RANGRF ENST00000226105.10 protein_coding 8288497,8288956,8289258,8289503,8289813 8288865,8289072,8289414,8289588,8290092 Gene ID= ENSG00000108961.13 TPM= 12.07 Transcript Type= protein_coding chr17 8288654 8290090 8288654 8290090 + ENST00000407006.8@RANGRF ENST00000407006.8 protein_coding 8288654,8288956,8289258,8289503 8288865,8289072,8289414,8290090 Gene ID= ENSG00000108961.13 TPM= 11.17 Transcript Type= protein_coding chr17 8288671 8290092 8288671 8290092 + ENST00000580434.5@RANGRF ENST00000580434.5 protein_coding 8288671,8288956,8289258,8289813 8288865,8289072,8289414,8290092 Gene ID= ENSG00000108961.13 TPM= 1.2 Transcript Type= protein_coding chr17 8310283 8322516 8310283 8322516 + ENST00000361926.7@ARHGEF15 ENST00000361926.7 protein_coding 8310283,8311991,8312922,8313501,8314906,8315066,8315414,8315755,8316019,8318387,8318570,8318750,8319007,8319312,8319499,8320842 8310343,8312640,8313254,8313555,8314964,8315277,8315574,8315907,8316148,8318461,8318662,8318910,8319159,8319394,8319603,8322516 Gene ID= ENSG00000198844.10 TPM= 5.43 Transcript Type= protein_coding chr17 8377521 8383167 8377521 8383167 - ENST00000584164.5@RPL26 ENST00000584164.5 protein_coding 8382781,8382143,8379796,8377521 8383167,8382315,8379936,8377692 Gene ID= ENSG00000161970.12 TPM= 18.86 Transcript Type= protein_coding chr17 8377520 8383193 8377520 8383193 - ENST00000293842.9@RPL26 ENST00000293842.9 protein_coding 8383157,8382143,8379796,8377520 8383193,8382315,8379936,8377692 Gene ID= ENSG00000161970.12 TPM= 501.52 Transcript Type= protein_coding chr17 8377549 8383166 8377549 8383166 - ENST00000582556.5@RPL26 ENST00000582556.5 protein_coding 8382862,8382143,8379796,8377549 8383166,8382315,8379936,8377692 Gene ID= ENSG00000161970.12 TPM= 3.02 Transcript Type= protein_coding chr17 8435861 8468160 8435861 8468160 + ENST00000334527.11@NDEL1 ENST00000334527.11 protein_coding 8435861,8444260,8445711,8446754,8448550,8450780,8454796,8460009,8466930 8436045,8444357,8445864,8446902,8448686,8450953,8454887,8460160,8468160 Gene ID= ENSG00000166579.15 TPM= 41.66 Transcript Type= protein_coding chr17 8474207 8630761 8474207 8630761 - ENST00000379980.8@MYH10 ENST00000379980.8 protein_coding 8630654,8622902,8604826,8589081,8577236,8576643,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512451,8509812,8508554,8506318,8504694,8500826,8499270,8495137,8493733,8492776,8492297,8490340,8487433,8484138,8481322,8480402,8480110,8478338,8476876,8474207 8630761,8623277,8604982,8589108,8577338,8576669,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657,8509949,8508677,8506489,8504906,8500970,8499476,8495241,8493885,8493024,8492509,8490552,8487594,8484266,8481410,8480525,8480318,8478446,8477048,8475948 Gene ID= ENSG00000133026.12 TPM= 9.51 Transcript Type= protein_coding chr17 8474212 8630761 8474212 8630761 - ENST00000269243.8@MYH10 ENST00000269243.8 protein_coding 8630654,8622902,8604826,8589081,8577236,8569720,8553955,8552046,8548644,8548313,8546544,8545448,8542107,8535758,8535387,8521092,8520878,8518881,8518631,8513786,8513538,8512451,8509812,8508554,8506318,8504694,8500826,8499270,8495137,8493733,8492776,8492297,8490340,8487433,8484138,8481322,8480402,8480110,8478338,8476876,8474212 8630761,8623277,8604982,8589108,8577338,8569812,8554018,8552144,8548787,8548408,8546662,8545600,8542280,8535931,8535501,8521285,8520999,8518950,8518791,8513894,8513669,8512657,8509949,8508677,8506489,8504906,8500970,8499476,8495241,8493885,8493024,8492509,8490552,8487594,8484266,8481410,8480525,8480318,8478446,8477048,8475948 Gene ID= ENSG00000133026.12 TPM= 13.13 Transcript Type= protein_coding chr17 8802737 8867677 8802737 8867677 - ENST00000619866.4@PIK3R6 ENST00000619866.4 protein_coding 8867529,8849782,8839614,8838564,8837803,8836791,8836547,8835273,8832889,8829706,8828567,8828112,8827172,8823387,8822996,8822587,8821846,8819083,8804041,8802737 8867677,8849885,8839697,8838655,8837871,8836923,8836616,8835456,8833045,8829792,8828990,8828190,8827294,8823497,8823086,8822657,8821936,8819198,8804153,8803429 Gene ID= ENSG00000276231.4 TPM= 1.81 Transcript Type= protein_coding chr17 8878919 8965712 8878919 8965712 - ENST00000611902.4@PIK3R5 ENST00000611902.4 protein_coding 8965596,8911392,8909074,8905669,8904777,8893586,8890738,8889139,8888171,8887521,8887096,8886477,8886229,8884707,8881788,8881630,8880905,8878919 8965712,8911507,8909174,8905737,8904915,8893655,8890912,8889222,8888891,8887683,8887221,8886605,8886322,8884783,8881881,8881712,8881017,8880786 Gene ID= ENSG00000141506.13 TPM= 2.26 Transcript Type= protein_coding chr17 8878917 8965712 8878917 8965712 - ENST00000447110.5@PIK3R5 ENST00000447110.5 protein_coding 8965596,8911392,8909074,8905669,8904777,8893586,8890738,8889973,8889139,8888171,8887521,8887096,8886477,8886229,8884707,8881788,8881630,8880905,8878917 8965712,8911507,8909174,8905737,8904915,8893655,8890912,8890126,8889222,8888891,8887683,8887221,8886605,8886322,8884783,8881881,8881712,8881017,8880786 Gene ID= ENSG00000141506.13 TPM= 7.7 Transcript Type= protein_coding chr17 9250472 9575835 9250472 9575835 - ENST00000575858.5@STX8 ENST00000575858.5 protein_coding 9575792,9568371,9505038,9491829,9378552,9250472 9575835,9568470,9505162,9491921,9378653,9250645 Gene ID= ENSG00000170310.14 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr17 9912966 10036561 9912966 10036561 - transcript1134.chr17.nic@GAS7 transcript1134.chr17.nic protein_coding 10036452,10019777,9981804,9969677,9959202,9946894,9943121,9940126,9934166,9926641,9925476,9919626,9918001,9912966 10036561,10019897,9981884,9969762,9959255,9946983,9943236,9940200,9934244,9926769,9925599,9919705,9918099,9917341 Gene ID= ENSG00000007237.18 TPM= 4.53 Transcript Type= NA chr17 10672474 10697568 10672474 10697568 - ENST00000255390.9@SCO1 ENST00000255390.9 protein_coding 10697235,10695741,10692764,10691872,10686727,10672474 10697568,10695831,10692961,10691964,10686842,10681253 Gene ID= ENSG00000133028.10 TPM= 28.98 Transcript Type= protein_coding chr17 10697594 10711233 10697594 10711233 + ENST00000379774.4@ADPRM ENST00000379774.4 protein_coding 10697594,10704910,10706438,10710834 10697667,10705527,10706554,10711233 Gene ID= ENSG00000170222.11 TPM= 4.53 Transcript Type= protein_coding chr17 10697614 10711233 10697614 10711233 + ENST00000468843.1@ADPRM ENST00000468843.1 protein_coding 10697614,10704910,10706438,10710834 10697667,10705615,10706554,10711233 Gene ID= ENSG00000170222.11 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr17 10713295 10730316 10713295 10730316 - ENST00000341871.7@TMEM220 ENST00000341871.7 protein_coding 10729780,10729031,10726204,10725011,10723270,10713295 10730316,10729060,10726264,10725134,10723329,10715588 Gene ID= ENSG00000187824.8 TPM= 35.32 Transcript Type= protein_coding chr17 10714087 10730004 10714087 10730004 - transcript1149.chr17.nic@TMEM220 transcript1149.chr17.nic protein_coding 10729780,10729031,10726204,10725011,10714087 10730004,10729060,10726264,10725134,10715588 Gene ID= ENSG00000187824.8 TPM= 1.81 Transcript Type= NA chr17 11598470 11612833 11598470 11612833 + ENST00000579828.5@DNAH9 ENST00000579828.5 protein_coding 11598470,11608129,11610396,11611650 11598915,11608325,11610554,11612833 Gene ID= ENSG00000007174.17 TPM= 2.72 Transcript Type= protein_coding chr17 11977439 11997433 11977439 11997433 - transcript1156.chr17.nic@ZNF18 transcript1156.chr17.nic protein_coding 11996810,11995558,11992443,11990974,11990462,11984113,11983297,11977439 11997433,11995679,11992911,11991163,11990550,11984197,11983407,11978744 Gene ID= ENSG00000154957.13 TPM= 1.81 Transcript Type= NA chr17 11977439 11997433 11977439 11997433 - transcript1158.chr17.nnic@ZNF18 transcript1158.chr17.nnic protein_coding 11996810,11992443,11990974,11990462,11984113,11983297,11977439 11997433,11992911,11991163,11990550,11984197,11983407,11978744 Gene ID= ENSG00000154957.13 TPM= 2.72 Transcript Type= NA chr17 11977439 11997510 11977439 11997510 - ENST00000580306.6@ZNF18 ENST00000580306.6 protein_coding 11997431,11992443,11990974,11990462,11984113,11983297,11977439 11997510,11992911,11991163,11990550,11984197,11983407,11978744 Gene ID= ENSG00000154957.13 TPM= 1.81 Transcript Type= protein_coding chr17 11953894 11997470 11953894 11997470 - transcript1160.chr17.nnic@ZNF18 transcript1160.chr17.nnic protein_coding 11997431,11992443,11990974,11990462,11984113,11953894 11997470,11992911,11991163,11990550,11984197,11958729 Gene ID= ENSG00000154957.13 TPM= 1.81 Transcript Type= NA chr17 12020824 12143823 12020824 12143823 + ENST00000353533.9@MAP2K4 ENST00000353533.9 protein_coding 12020824,12054889,12081356,12095575,12107790,12110375,12113233,12125294,12129139,12139839,12141147 12021001,12054991,12081530,12095694,12107909,12110426,12113360,12125371,12129287,12139884,12143823 Gene ID= ENSG00000065559.14 TPM= 28.98 Transcript Type= protein_coding chr17 12789503 12991642 12789503 12991642 + transcript1188.chr17.nic@ARHGAP44 transcript1188.chr17.nic protein_coding 12789503,12894940,12896407,12908897,12915900,12919755,12928929,12941056,12943588,12944069,12949140,12949649,12952501,12955867,12956655,12958717,12974089,12980058,12984531,12987101,12990032 12789891,12894979,12896511,12908973,12916011,12919831,12929046,12941124,12943669,12944196,12949251,12949730,12952581,12955980,12956746,12958897,12974310,12980233,12984908,12987152,12991642 Gene ID= ENSG00000006740.16 TPM= 1.81 Transcript Type= NA chr17 12991615 13017698 12991615 13017698 - transcript1176.chr17.nic@ELAC2 transcript1176.chr17.nic protein_coding 13017567,13017071,13016862,13015768,13014439,13013207,13011663,13010613,13005921,13005753,13004989,13003479,13002441,13002274,13000156,12998412,12996547,12995940,12995703,12994963,12994764,12994425,12993687,12991615 13017698,13017121,13016932,13015832,13014496,13013275,13011782,13010671,13005979,13005825,13005101,13003574,13002579,13002359,13000274,12998508,12996685,12995978,12995812,12995062,12994884,12994503,12993831,12993045 Gene ID= ENSG00000006744.18 TPM= 31.69 Transcript Type= NA chr17 14028664 14069492 14028664 14069492 - transcript1197.chr17.nnic@COX10-AS1 transcript1197.chr17.nnic processed_transcript 14069272,14034008,14033552,14028664 14069492,14034416,14033661,14030928 Gene ID= ENSG00000236088.9 TPM= 1.81 Transcript Type= NA chr17 14029297 14069492 14029297 14069492 - transcript1200.chr17.nnic@COX10-AS1 transcript1200.chr17.nnic processed_transcript 14069272,14034008,14033552,14029297 14069492,14034416,14033661,14030788 Gene ID= ENSG00000236088.9 TPM= 1.81 Transcript Type= NA chr17 14069496 14077322 14069496 14077322 + ENST00000429152.6@COX10 ENST00000429152.6 protein_coding 14069496,14074323,14076735 14069648,14074456,14077322 Gene ID= ENSG00000006695.10 TPM= 2.72 Transcript Type= protein_coding chr17 14069529 14208677 14069529 14208677 + ENST00000261643.7@COX10 ENST00000261643.7 protein_coding 14069529,14074323,14076735,14102118,14159877,14191989,14206810 14069648,14074456,14077056,14102242,14159947,14192221,14208677 Gene ID= ENSG00000006695.10 TPM= 24.45 Transcript Type= protein_coding chr17 15229778 15260879 15229778 15260879 - transcript1212.chr17.nic@PMP22 transcript1212.chr17.nic protein_coding 15260650,15259094,15239471,15229778 15260879,15259193,15239611,15231080 Gene ID= ENSG00000109099.13 TPM= 48.9 Transcript Type= NA chr17 15229778 15262589 15229778 15262589 - ENST00000395938.6@PMP22 ENST00000395938.6 protein_coding 15262429,15260650,15259094,15239471,15229778 15262589,15260761,15259193,15239611,15231080 Gene ID= ENSG00000109099.13 TPM= 96.89 Transcript Type= protein_coding chr17 15436011 15563560 15436011 15563560 - transcript1215.chr17.nic@TVP23C-CDRT4 transcript1215.chr17.nic protein_coding 15563437,15555282,15553685,15547059,15545785,15540433,15503098,15440208,15436011 15563560,15555364,15553829,15547148,15545916,15540561,15503232,15440285,15438200 Gene ID= ENSG00000259024.6 TPM= 4.83 Transcript Type= NA chr17 15436011 15563555 15436011 15563555 - transcript1220.chr17.nnic@TVP23C-CDRT4 transcript1220.chr17.nnic protein_coding 15563437,15555282,15553685,15547059,15545785,15540433,15440208,15436011 15563555,15555364,15553829,15547148,15545916,15540561,15440285,15438200 Gene ID= ENSG00000259024.6 TPM= 3.92 Transcript Type= NA chr17 15436021 15563561 15436021 15563561 - ENST00000522212.6@TVP23C-CDRT4 ENST00000522212.6 protein_coding 15563437,15555282,15553685,15547059,15545785,15440208,15436021 15563561,15555364,15553829,15547148,15545916,15440285,15438200 Gene ID= ENSG00000259024.6 TPM= 9.35 Transcript Type= protein_coding chr17 15627959 15684311 15627959 15684311 - transcript1233.chr17.nic@TRIM16 transcript1233.chr17.nic protein_coding 15683036,15682854,15680865,15677575,15677176,15651091,15642721,15636036,15632509,15631619,15627959 15684311,15682951,15680953,15677721,15677280,15651946,15642816,15636269,15632674,15631714,15629198 Gene ID= ENSG00000221926.11 TPM= 96.35 Transcript Type= NA chr17 15627959 15684311 15627959 15684311 - transcript1236.chr17.nic@TRIM16 transcript1236.chr17.nic protein_coding 15683036,15682854,15680865,15658802,15642721,15636036,15632509,15631619,15627959 15684311,15682951,15680953,15658876,15642816,15636269,15632674,15631714,15629198 Gene ID= ENSG00000221926.11 TPM= 3.98 Transcript Type= NA chr17 15627960 15642964 15627960 15642964 - ENST00000577886.5@TRIM16 ENST00000577886.5 protein_coding 15642721,15636036,15632509,15631619,15627960 15642964,15636269,15632674,15631714,15629198 Gene ID= ENSG00000221926.11 TPM= 6.25 Transcript Type= protein_coding chr17 15699777 15720787 15699777 15720787 + ENST00000464847.6@ZNF286A ENST00000464847.6 protein_coding 15699777,15701152,15706387,15708155,15716059 15700366,15701240,15706501,15708247,15720787 Gene ID= ENSG00000187607.15 TPM= 9.06 Transcript Type= protein_coding chr17 15944917 15975746 15944917 15975746 + ENST00000304222.2@ADORA2B ENST00000304222.2 protein_coding 15944917,15974679 15945583,15975746 Gene ID= ENSG00000170425.3 TPM= 2.72 Transcript Type= protein_coding chr17 15976563 15999717 15976563 15999717 - transcript1258.chr17.nic@ZSWIM7 transcript1258.chr17.nic protein_coding 15999519,15993757,15987266,15981040,15978044,15977800,15977579,15976563 15999717,15993778,15987368,15981144,15978163,15977913,15977700,15977092 Gene ID= ENSG00000214941.7 TPM= 1.81 Transcript Type= NA chr17 15976560 15999650 15976560 15999650 - ENST00000490395.5@ZSWIM7 ENST00000490395.5 protein_coding 15999506,15993757,15987266,15981040,15978044,15977800,15977579,15976560 15999650,15993778,15987368,15981144,15978163,15977913,15977700,15977092 Gene ID= ENSG00000214941.7 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr17 15976560 15999692 15976560 15999692 - ENST00000399277.5@ZSWIM7 ENST00000399277.5 protein_coding 15999519,15993757,15987266,15981040,15976560 15999692,15993778,15987368,15981144,15978163 Gene ID= ENSG00000214941.7 TPM= 9.96 Transcript Type= protein_coding chr17 15977727 15999684 15977727 15999684 - ENST00000472495.5@ZSWIM7 ENST00000472495.5 protein_coding 15999519,15993757,15987266,15981040,15978044,15977727 15999684,15993778,15987368,15981144,15978163,15977913 Gene ID= ENSG00000214941.7 TPM= 4.75 Transcript Type= protein_coding chr17 15977727 15999717 15977727 15999717 - ENST00000491631.5@ZSWIM7 ENST00000491631.5 protein_coding 15999506,15993757,15987266,15981040,15977727 15999717,15993778,15987368,15981144,15978163 Gene ID= ENSG00000214941.7 TPM= 5.66 Transcript Type= nonsense_mediated_decay chr17 15977733 15999669 15977733 15999669 - ENST00000486706.6@ZSWIM7 ENST00000486706.6 protein_coding 15999506,15993757,15987266,15986800,15981040,15977733 15999669,15993778,15987368,15986892,15981144,15978163 Gene ID= ENSG00000214941.7 TPM= 1.13 Transcript Type= nonsense_mediated_decay chr17 15977727 15999688 15977727 15999688 - ENST00000460315.5@ZSWIM7 ENST00000460315.5 protein_coding 15999503,15993757,15987266,15981040,15978044,15977727 15999688,15993778,15987368,15981144,15978163,15977913 Gene ID= ENSG00000214941.7 TPM= 1.13 Transcript Type= nonsense_mediated_decay chr17 15999802 16028786 15999802 16028786 + ENST00000475723.5@TTC19 ENST00000475723.5 protein_coding 15999802,16000118,16001915,16002793,16003831,16004201,16006474,16025017,16026540,16027374 16000032,16000382,16002025,16002831,16003887,16004262,16006568,16025171,16026702,16028786 Gene ID= ENSG00000011295.15 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr17 16126132 16215530 16126132 16215530 - ENST00000436828.5@NCOR1 ENST00000436828.5 protein_coding 16215362,16198601,16194462,16186554,16171803,16164979,16158760,16153339,16151946,16151590,16149451,16146376,16143606,16139008,16138158,16137311,16126132 16215530,16198719,16194639,16186687,16171995,16165161,16158873,16153395,16151998,16151616,16149517,16146548,16143696,16139186,16138212,16137412,16126206 Gene ID= ENSG00000141027.20 TPM= 12.68 Transcript Type= protein_coding chr17 16164871 16215548 16164871 16215548 - ENST00000585296.1@NCOR1 ENST00000585296.1 protein_coding 16215362,16194462,16186554,16171803,16164871 16215548,16194639,16186687,16171995,16165161 Gene ID= ENSG00000141027.20 TPM= 1.81 Transcript Type= retained_intron chr17 16342518 16353466 16342518 16353466 - transcript1279.chr17.nic@CENPV transcript1279.chr17.nic protein_coding 16353027,16348616,16344597,16342518 16353466,16350029,16344711,16342941 Gene ID= ENSG00000166582.9 TPM= 3.62 Transcript Type= NA chr17 16347898 16353490 16347898 16353490 - transcript1280.chr17.nic@CENPV transcript1280.chr17.nic protein_coding 16353027,16349931,16347898 16353490,16350029,16349333 Gene ID= ENSG00000166582.9 TPM= 5.43 Transcript Type= NA chr17 16342534 16353499 16342534 16353499 - ENST00000299736.4@CENPV ENST00000299736.4 protein_coding 16353027,16349931,16348616,16344597,16342534 16353499,16350029,16348685,16344711,16342941 Gene ID= ENSG00000166582.9 TPM= 11.77 Transcript Type= protein_coding chr17 16342534 16353456 16342534 16353456 - ENST00000476243.5@CENPV ENST00000476243.5 protein_coding 16353027,16349931,16348616,16344597,16342534 16353456,16350029,16349333,16344711,16342941 Gene ID= ENSG00000166582.9 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr17 16380799 16382740 16380799 16382740 + ENST00000302182.7@UBB ENST00000302182.7 protein_coding 16380799,16381902 16381184,16382740 Gene ID= ENSG00000170315.13 TPM= 1165.89 Transcript Type= protein_coding chr17 16381095 16382745 16381095 16382745 + ENST00000578649.1@UBB ENST00000578649.1 protein_coding 16381095,16382359 16381184,16382745 Gene ID= ENSG00000170315.13 TPM= 8.15 Transcript Type= processed_transcript chr17 16381290 16382740 16381290 16382740 + ENST00000395839.5@UBB ENST00000395839.5 protein_coding 16381290,16381902 16381462,16382740 Gene ID= ENSG00000170315.13 TPM= 12.22 Transcript Type= protein_coding chr17 16381091 16382739 16381091 16382739 + ENST00000535788.1@UBB ENST00000535788.1 protein_coding 16381091,16381902,16382359 16381184,16382130,16382739 Gene ID= ENSG00000170315.13 TPM= 7.24 Transcript Type= protein_coding chr17 16415523 16437001 16415523 16437001 + transcript1297.chr17.nic@TRPV2 transcript1297.chr17.nic protein_coding 16415523,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16431784,16431966,16434890,16436789 16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16431850,16432300,16434969,16437001 Gene ID= ENSG00000187688.14 TPM= 4.53 Transcript Type= NA chr17 16415523 16437001 16415523 16437001 + transcript1302.chr17.nnic@TRPV2 transcript1302.chr17.nnic protein_coding 16415523,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16433574,16434890,16436789 16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16433698,16434969,16437001 Gene ID= ENSG00000187688.14 TPM= 2.72 Transcript Type= NA chr17 16415542 16437003 16415542 16437003 + ENST00000338560.11@TRPV2 ENST00000338560.11 protein_coding 16415542,16417562,16420115,16422599,16423469,16426099,16426722,16427449,16428317,16428817,16431784,16431966,16433574,16434890,16436789 16415833,16417868,16420248,16422889,16423767,16426269,16426877,16427547,16428387,16428982,16431850,16432300,16433698,16434969,16437003 Gene ID= ENSG00000187688.14 TPM= 112.29 Transcript Type= protein_coding chr17 16439035 16442030 16439035 16442030 + transcript1309.chr17.nic@LRRC75A-AS1 transcript1309.chr17.nic processed_transcript 16439035,16439327,16439528,16440185,16441074,16441368 16439060,16439414,16439703,16440253,16441130,16442030 Gene ID= ENSG00000175061.17 TPM= 43.31 Transcript Type= NA chr17 16439036 16442030 16439036 16442030 + transcript1310.chr17.nic@LRRC75A-AS1 transcript1310.chr17.nic processed_transcript 16439036,16439327,16439581,16440185,16441074,16441368 16439060,16439414,16439703,16440253,16441130,16442030 Gene ID= ENSG00000175061.17 TPM= 31.54 Transcript Type= NA chr17 16439020 16442012 16439020 16442012 + ENST00000582911.5@LRRC75A-AS1 ENST00000582911.5 processed_transcript 16439020,16439327,16440185,16441074,16441368 16439060,16439393,16440253,16441130,16442012 Gene ID= ENSG00000175061.17 TPM= 270.15 Transcript Type= antisense_RNA chr17 16439011 16441995 16439011 16441995 + ENST00000497774.5@LRRC75A-AS1 ENST00000497774.5 processed_transcript 16439011,16439327,16441074,16441368 16439060,16440253,16441130,16441995 Gene ID= ENSG00000175061.17 TPM= 3.62 Transcript Type= retained_intron chr17 16438987 16442028 16438987 16442028 + ENST00000481898.5@LRRC75A-AS1 ENST00000481898.5 processed_transcript 16438987,16439327,16439660,16440185,16441074,16441368 16439060,16439414,16439703,16440253,16441130,16442028 Gene ID= ENSG00000175061.17 TPM= 12.52 Transcript Type= antisense_RNA chr17 16439321 16441987 16439321 16441987 + ENST00000481027.5@LRRC75A-AS1 ENST00000481027.5 processed_transcript 16439321,16439528,16440185,16441074,16441368 16439414,16439703,16440253,16441130,16441987 Gene ID= ENSG00000175061.17 TPM= 5.28 Transcript Type= antisense_RNA chr17 16553112 16569214 16553112 16569214 - transcript1324.chr17.nnic@ZNF287 transcript1324.chr17.nnic protein_coding 16568952,16566525,16563699,16563146,16553112 16569214,16566622,16563825,16563232,16553426 Gene ID= ENSG00000141040.14 TPM= 3.62 Transcript Type= NA chr17 16620734 16653816 16620734 16653816 - transcript1325.chr17.nic@ZNF624 transcript1325.chr17.nic protein_coding 16653568,16649658,16647329,16634630,16633862,16620734 16653816,16649746,16647394,16634756,16633957,16624509 Gene ID= ENSG00000197566.9 TPM= 1.81 Transcript Type= NA chr17 17042436 17186083 17042436 17186083 + transcript1328.chr17.nic@MPRIP transcript1328.chr17.nic protein_coding 17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823 17042971,17075787,17078076,17126853,17131701,17136450,17138429,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17186083 Gene ID= ENSG00000133030.20 TPM= 21.2 Transcript Type= NA chr17 17042436 17186083 17042436 17186083 + transcript1331.chr17.nic@MPRIP transcript1331.chr17.nic protein_coding 17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17176426,17177250,17180003,17180607,17184823 17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17176512,17177412,17180088,17180669,17186083 Gene ID= ENSG00000133030.20 TPM= 6.26 Transcript Type= NA chr17 17042436 17186083 17042436 17186083 + transcript1332.chr17.nic@MPRIP transcript1332.chr17.nic protein_coding 17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17180607,17184823 17042971,17075787,17078076,17126853,17131701,17136450,17138075,17142765,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17180669,17186083 Gene ID= ENSG00000133030.20 TPM= 7.16 Transcript Type= NA chr17 17042436 17187186 17042436 17187186 + transcript1334.chr17.nic@MPRIP transcript1334.chr17.nic protein_coding 17042436,17075710,17078011,17126702,17131617,17136219,17137916,17142627,17143556,17146036,17147319,17150144,17154306,17158432,17161240,17171718,17172698,17173916,17175293,17176426,17177250,17180003,17184823 17042971,17075787,17078076,17126853,17131701,17136450,17138429,17142765,17143669,17146092,17147387,17150233,17154415,17159002,17161356,17171865,17172815,17174075,17175412,17176512,17177412,17180088,17187186 Gene ID= ENSG00000133030.20 TPM= 24.22 Transcript Type= NA chr17 17200995 17206315 17200995 17206315 - ENST00000321560.3@PLD6 ENST00000321560.3 protein_coding 17205860,17200995 17206315,17203098 Gene ID= ENSG00000179598.5 TPM= 5.43 Transcript Type= protein_coding chr17 17212212 17237139 17212212 17237139 - ENST00000285071.8@FLCN ENST00000285071.8 protein_coding 17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221537,17219019,17217069,17216380,17215185,17214985,17212212 17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628,17219209,17217182,17216503,17215316,17215090,17213856 Gene ID= ENSG00000154803.12 TPM= 12.68 Transcript Type= protein_coding chr17 17221171 17237139 17221171 17237139 - ENST00000389169.9@FLCN ENST00000389169.9 protein_coding 17236912,17232788,17231794,17227889,17226176,17223922,17222501,17221171 17237139,17232901,17231882,17228161,17226322,17224143,17222661,17221628 Gene ID= ENSG00000154803.12 TPM= 8.15 Transcript Type= protein_coding chr17 17246821 17281299 17246821 17281299 - transcript1351.chr17.nic@COPS3 transcript1351.chr17.nic protein_coding 17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246821 17281299,17276183,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151 Gene ID= ENSG00000141030.12 TPM= 3.38 Transcript Type= NA chr17 17246821 17281303 17246821 17281303 - transcript1352.chr17.nic@COPS3 transcript1352.chr17.nic protein_coding 17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246821 17281303,17276164,17271008,17270807,17268045,17264981,17262106,17260474,17254945,17249039,17247560,17247151 Gene ID= ENSG00000141030.12 TPM= 2.47 Transcript Type= NA chr17 17246619 17281303 17246619 17281303 - transcript1354.chr17.nic@COPS3 transcript1354.chr17.nic protein_coding 17281132,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246619 17281303,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151 Gene ID= ENSG00000141030.12 TPM= 7.91 Transcript Type= NA chr17 17246836 17281293 17246836 17281293 - ENST00000268717.9@COPS3 ENST00000268717.9 protein_coding 17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246836 17281293,17276164,17271008,17270807,17267977,17264981,17262106,17260474,17254945,17249039,17247560,17247151 Gene ID= ENSG00000141030.12 TPM= 54.69 Transcript Type= protein_coding chr17 17246837 17281191 17246837 17281191 - ENST00000578317.5@COPS3 ENST00000578317.5 protein_coding 17281132,17276035,17270896,17270758,17267885,17264802,17261966,17260301,17254859,17248926,17247480,17246837 17281191,17276183,17271008,17270807,17268045,17264981,17262106,17260474,17254945,17249039,17247560,17247151 Gene ID= ENSG00000141030.12 TPM= 1.27 Transcript Type= nonsense_mediated_decay chr17 17303335 17347661 17303335 17347661 + ENST00000389022.8@NT5M ENST00000389022.8 protein_coding 17303335,17306543,17323185,17344794,17346805 17303817,17306643,17323245,17344908,17347661 Gene ID= ENSG00000205309.13 TPM= 1.81 Transcript Type= protein_coding chr17 17303335 17347661 17303335 17347661 + ENST00000616989.1@NT5M ENST00000616989.1 protein_coding 17303335,17306543,17323185,17344794,17346805 17303817,17306643,17323245,17344926,17347661 Gene ID= ENSG00000205309.13 TPM= 1.81 Transcript Type= protein_coding chr17 17476986 17493226 17476986 17493226 + ENST00000268711.3@MED9 ENST00000268711.3 protein_coding 17476986,17491279 17477265,17493226 Gene ID= ENSG00000141026.5 TPM= 59.77 Transcript Type= protein_coding chr17 17494437 17496393 17494437 17496393 - ENST00000225688.3@RASD1 ENST00000225688.3 protein_coding 17495896,17494437 17496393,17495684 Gene ID= ENSG00000108551.4 TPM= 347.73 Transcript Type= protein_coding chr17 17505563 17591700 17505563 17591700 - ENST00000255389.9@PEMT ENST00000255389.9 protein_coding 17591531,17576920,17522280,17512509,17509434,17506227,17505563 17591700,17577027,17522395,17512654,17509545,17506301,17505848 Gene ID= ENSG00000133027.17 TPM= 40.75 Transcript Type= protein_coding chr17 17681473 17811453 17681473 17811453 + ENST00000353383.5@RAI1 ENST00000353383.5 protein_coding 17681473,17724028,17792933,17803756,17809390,17809970 17681793,17724159,17798513,17803849,17809439,17811453 Gene ID= ENSG00000108557.18 TPM= 26.26 Transcript Type= protein_coding chr17 17811311 17823680 17811311 17823680 - transcript1373.chr17.nic@SREBF1 transcript1373.chr17.nic protein_coding 17823518,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17811311 17823680,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851 Gene ID= ENSG00000072310.16 TPM= 257.47 Transcript Type= NA chr17 17812073 17836987 17812073 17836987 - ENST00000355815.8@SREBF1 ENST00000355815.8 protein_coding 17836727,17823518,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073 17836987,17823607,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851 Gene ID= ENSG00000072310.16 TPM= 905.84 Transcript Type= protein_coding chr17 17812073 17837002 17812073 17837002 - ENST00000261646.9@SREBF1 ENST00000261646.9 protein_coding 17836727,17820090,17819538,17819320,17819013,17818260,17817696,17817256,17816958,17816457,17816207,17815860,17815221,17814835,17814615,17814245,17813569,17813368,17812073 17837002,17820521,17819725,17819454,17819234,17818374,17817916,17817457,17817136,17816718,17816373,17816028,17815329,17814944,17814747,17814410,17813769,17813479,17812851 Gene ID= ENSG00000072310.16 TPM= 287.36 Transcript Type= protein_coding chr17 17843509 17972416 17843509 17972416 - transcript1384.chr17.nnic@TOM1L2 transcript1384.chr17.nnic protein_coding 17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17850893,17848823,17843509 17972416,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17850952,17848859,17847783 Gene ID= ENSG00000175662.17 TPM= 56.14 Transcript Type= NA chr17 17846825 17972397 17846825 17972397 - ENST00000379504.7@TOM1L2 ENST00000379504.7 protein_coding 17972262,17907447,17898596,17893661,17884634,17882705,17879627,17869340,17866876,17866296,17862731,17861476,17850893,17848823,17846825 17972397,17907531,17898674,17893810,17884768,17882863,17879743,17869473,17866924,17866419,17862848,17861551,17850952,17848859,17847783 Gene ID= ENSG00000175662.17 TPM= 3.62 Transcript Type= protein_coding chr17 18015057 18039202 18015057 18039202 - transcript1388.chr17.nic@ATPAF2 transcript1388.chr17.nic protein_coding 18038881,18028615,18028232,18026319,18024624,18021745,18021123,18015057 18039202,18028659,18028377,18026416,18024704,18021857,18021238,18016260 Gene ID= ENSG00000171953.15 TPM= 2.72 Transcript Type= NA chr17 18018010 18039168 18018010 18039168 - ENST00000474627.7@ATPAF2 ENST00000474627.7 protein_coding 18038881,18028615,18028232,18026319,18024624,18021745,18021123,18018010 18039168,18028659,18028377,18026416,18024704,18021857,18021238,18018686 Gene ID= ENSG00000171953.15 TPM= 31.69 Transcript Type= protein_coding chr17 18039292 18068404 18039292 18068404 + ENST00000268719.8@GID4 ENST00000268719.8 protein_coding 18039292,18045147,18054127,18058868,18061845,18065180 18039902,18045206,18054234,18058969,18061975,18068404 Gene ID= ENSG00000141034.9 TPM= 9.06 Transcript Type= protein_coding chr17 18087939 18107982 18087939 18107982 + transcript1394.chr17.nnic@DRG2 transcript1394.chr17.nnic protein_coding 18087939,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104560,18106433,18107154 18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107982 Gene ID= ENSG00000108591.9 TPM= 2.4 Transcript Type= NA chr17 18087930 18107982 18087930 18107982 + transcript1397.chr17.nic@DRG2 transcript1397.chr17.nic protein_coding 18087930,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18104623,18106433,18107154 18088087,18093973,18098359,18099077,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107982 Gene ID= ENSG00000108591.9 TPM= 3.83 Transcript Type= NA chr17 18087910 18107982 18087910 18107982 + transcript1399.chr17.nic@DRG2 transcript1399.chr17.nic protein_coding 18087910,18093813,18098270,18099017,18100569,18101493,18101921,18103801,18104623,18106433,18107154 18088087,18093973,18098359,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107982 Gene ID= ENSG00000108591.9 TPM= 2.52 Transcript Type= NA chr17 18087886 18107971 18087886 18107971 + ENST00000225729.7@DRG2 ENST00000225729.7 protein_coding 18087886,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104623,18106433,18107154 18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107971 Gene ID= ENSG00000108591.9 TPM= 63.3 Transcript Type= protein_coding chr17 18087925 18107959 18087925 18107959 + ENST00000395726.8@DRG2 ENST00000395726.8 protein_coding 18087925,18093813,18098270,18099017,18099633,18100363,18100569,18101493,18101921,18103801,18104623,18106433,18107154 18088087,18093973,18098359,18099077,18099723,18100435,18100659,18101590,18101997,18103889,18104681,18106470,18107959 Gene ID= ENSG00000108591.9 TPM= 1.09 Transcript Type= protein_coding chr17 18087968 18107970 18087968 18107970 + ENST00000467099.6@DRG2 ENST00000467099.6 protein_coding 18087968,18093813,18098270,18099017,18099633,18100569,18101493,18101921,18103801,18104623,18106433,18107154 18088087,18093968,18098359,18099093,18100435,18100659,18101590,18101997,18103889,18104681,18106486,18107970 Gene ID= ENSG00000108591.9 TPM= 2.92 Transcript Type= nonsense_mediated_decay chr17 18184239 18209954 18184239 18209954 + ENST00000399138.4@ALKBH5 ENST00000399138.4 protein_coding 18184239,18194955,18206815,18208219 18185013,18195035,18206970,18209954 Gene ID= ENSG00000091542.8 TPM= 18.26 Transcript Type= protein_coding chr17 18244800 18260023 18244800 18260023 - transcript1416.chr17.nic@FLII transcript1416.chr17.nic protein_coding 18258628,18256909,18256526,18255183,18254769,18254521,18254079,18253544,18253301,18252472,18251999,18251680,18251265,18250838,18249326,18249127,18248800,18248550,18247929,18247657,18247169,18246913,18246594,18246308,18246162,18245934,18245744,18245555,18245354,18244800 18260023,18257019,18256597,18255263,18254854,18254682,18254182,18253719,18253458,18252556,18252146,18251813,18251477,18251017,18249408,18249201,18248883,18248721,18248033,18247848,18247357,18247052,18246828,18246462,18246222,18246062,18245850,18245660,18245419,18245272 Gene ID= ENSG00000177731.15 TPM= 181.89 Transcript Type= NA chr17 18260646 18266514 18260646 18266514 + transcript1470.chr17.nnic@MIEF2 transcript1470.chr17.nnic protein_coding 18260646,18262714,18263086,18263416,18263710 18260737,18262867,18263248,18263604,18266514 Gene ID= ENSG00000177427.12 TPM= 1.81 Transcript Type= NA chr17 18260524 18265773 18260524 18265773 + transcript1472.chr17.nnic@MIEF2 transcript1472.chr17.nnic protein_coding 18260524,18262714,18263086,18263710,18265246 18260737,18262867,18263248,18264764,18265773 Gene ID= ENSG00000177427.12 TPM= 1.81 Transcript Type= NA chr17 18260534 18266552 18260534 18266552 + ENST00000323019.8@MIEF2 ENST00000323019.8 protein_coding 18260534,18262714,18263086,18263710 18260737,18262867,18263248,18266552 Gene ID= ENSG00000177427.12 TPM= 69.73 Transcript Type= protein_coding chr17 18274228 18314993 18274228 18314993 - ENST00000584582.5@TOP3A ENST00000584582.5 protein_coding 18314599,18306891,18305112,18302580,18302264,18301885,18299559,18294703,18292645,18290842,18290557,18285407,18285142,18282698,18280536,18277675,18274228 18314993,18306966,18305220,18302723,18302434,18301985,18299633,18294785,18292852,18291027,18290686,18285520,18285307,18282841,18280658,18278357,18274980 Gene ID= ENSG00000177302.14 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr17 18315310 18328055 18315310 18328055 + ENST00000406438.4@SMCR8 ENST00000406438.4 protein_coding 18315310,18322617 18318149,18328055 Gene ID= ENSG00000176994.10 TPM= 3.62 Transcript Type= protein_coding chr17 18327881 18363470 18327881 18363470 - transcript1483.chr17.nic@SHMT1 transcript1483.chr17.nic protein_coding 18363372,18360414,18355886,18353672,18348325,18347496,18340732,18340043,18335559,18333166,18330555,18329278,18327881 18363470,18360552,18356000,18353817,18348440,18347656,18340813,18340255,18335675,18333288,18330671,18329388,18328919 Gene ID= ENSG00000176974.19 TPM= 2.72 Transcript Type= NA chr17 18327881 18363470 18327881 18363470 - transcript1487.chr17.nic@SHMT1 transcript1487.chr17.nic protein_coding 18363372,18360414,18355886,18353672,18348325,18347496,18340732,18340043,18333166,18330555,18329278,18327881 18363470,18360552,18356000,18353817,18348440,18347656,18340813,18340255,18333288,18330671,18329388,18328919 Gene ID= ENSG00000176974.19 TPM= 2.72 Transcript Type= NA chr17 18327873 18363487 18327873 18363487 - ENST00000316694.7@SHMT1 ENST00000316694.7 protein_coding 18363372,18355886,18353672,18348325,18347496,18340732,18340043,18335559,18333166,18330555,18329278,18327873 18363487,18356000,18353817,18348440,18347656,18340813,18340255,18335675,18333288,18330671,18329388,18328919 Gene ID= ENSG00000176974.19 TPM= 9.96 Transcript Type= protein_coding chr17 18511217 18528599 18511217 18528599 - transcript1491.chr17.nnic@AC107983.2 transcript1491.chr17.nnic processed_transcript 18528573,18527570,18523777,18519482,18517185,18515346,18514589,18511217 18528599,18527760,18523877,18519674,18517473,18515770,18514681,18513458 Gene ID= ENSG00000273018.5 TPM= 1.81 Transcript Type= NA chr17 18587666 18625613 18587666 18625613 - transcript1492.chr17.nnic@CCDC144B transcript1492.chr17.nnic transcribed_unprocessed_pseudogene 18625104,18622499,18610044,18607897,18605780,18603604,18595148,18594721,18588267,18587666 18625613,18622569,18610292,18607970,18606619,18603740,18595181,18594862,18588346,18587879 Gene ID= ENSG00000154874.15 TPM= 1.81 Transcript Type= NA chr17 18697979 18736118 18697979 18736118 + transcript1495.chr17.nnic@TRIM16L transcript1495.chr17.nnic protein_coding 18697979,18699154,18699360,18701357,18704619,18705063,18718899,18720102,18722237,18727525,18731070,18732039,18734877 18698114,18699275,18699457,18701445,18704765,18705164,18719036,18720325,18722332,18727758,18731235,18732134,18736118 Gene ID= ENSG00000108448.21 TPM= 3.62 Transcript Type= NA chr17 18697979 18736118 18697979 18736118 + transcript1497.chr17.nnic@TRIM16L transcript1497.chr17.nnic protein_coding 18697979,18699154,18699360,18701357,18704619,18705063,18720102,18722237,18727525,18731070,18732039,18734877 18698114,18699275,18699457,18701445,18704765,18705164,18720325,18722332,18727758,18731235,18732134,18736118 Gene ID= ENSG00000108448.21 TPM= 7.24 Transcript Type= NA chr17 18697979 18736118 18697979 18736118 + transcript1498.chr17.nic@TRIM16L transcript1498.chr17.nic protein_coding 18697979,18699154,18699360,18701357,18704619,18705063,18722237,18727525,18731070,18732039,18734877 18698114,18699275,18699457,18701445,18704765,18705164,18722332,18727758,18731235,18732134,18736118 Gene ID= ENSG00000108448.21 TPM= 3.62 Transcript Type= NA chr17 18856340 18931282 18856340 18931282 + transcript1511.chr17.nic@PRPSAP2 transcript1511.chr17.nic protein_coding 18856340,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18856429,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 4.11 Transcript Type= NA chr17 18856356 18931282 18856356 18931282 + transcript1512.chr17.nnic@PRPSAP2 transcript1512.chr17.nnic protein_coding 18856356,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18856476,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 3.21 Transcript Type= NA chr17 18856330 18931282 18856330 18931282 + transcript1514.chr17.nnic@PRPSAP2 transcript1514.chr17.nnic protein_coding 18856330,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18856429,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 5.02 Transcript Type= NA chr17 18858156 18931282 18858156 18931282 + transcript1516.chr17.nic@PRPSAP2 transcript1516.chr17.nic protein_coding 18858156,18865469,18865802,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18858261,18865564,18865952,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 2.3 Transcript Type= NA chr17 18858126 18931282 18858126 18931282 + transcript1517.chr17.nic@PRPSAP2 transcript1517.chr17.nic protein_coding 18858126,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18858261,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 9.54 Transcript Type= NA chr17 18856330 18931282 18856330 18931282 + transcript1519.chr17.nnic@PRPSAP2 transcript1519.chr17.nnic protein_coding 18856330,18865802,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18856429,18865952,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 4.11 Transcript Type= NA chr17 18856337 18931282 18856337 18931282 + transcript1520.chr17.nic@PRPSAP2 transcript1520.chr17.nic protein_coding 18856337,18865802,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18856476,18865952,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931282 Gene ID= ENSG00000141127.14 TPM= 2.3 Transcript Type= NA chr17 18858107 18931215 18858107 18931215 + ENST00000268835.6@PRPSAP2 ENST00000268835.6 protein_coding 18858107,18865469,18865802,18867282,18872583,18877698,18882568,18889822,18911103,18923914,18928811,18930540 18858261,18865564,18865952,18867334,18872649,18877870,18882683,18889877,18911251,18923984,18928957,18931215 Gene ID= ENSG00000141127.14 TPM= 4.75 Transcript Type= protein_coding chr17 18968789 19004804 18968789 19004804 - ENST00000388995.10@FAM83G ENST00000388995.10 protein_coding 19004709,19003520,18988247,18979549,18977584,18968789 19004804,19004169,18988414,18979673,18978850,18971748 Gene ID= ENSG00000188522.14 TPM= 1.81 Transcript Type= protein_coding chr17 19237341 19336715 19237341 19336715 + ENST00000314728.9@EPN2 ENST00000314728.9 protein_coding 19237341,19281955,19282950,19285620,19309885,19312052,19313105,19328711,19329561,19331853,19333956 19237531,19282077,19283714,19285790,19309997,19312144,19313279,19328887,19329647,19332068,19336715 Gene ID= ENSG00000072134.15 TPM= 1.81 Transcript Type= protein_coding chr17 19237377 19336715 19237377 19336715 + ENST00000347697.6@EPN2 ENST00000347697.6 protein_coding 19237377,19281955,19282950,19309885,19312052,19313105,19328711,19329561,19331853,19333956 19237531,19282077,19283714,19309997,19312144,19313279,19328887,19329647,19332068,19336715 Gene ID= ENSG00000072134.15 TPM= 20.83 Transcript Type= protein_coding chr17 19335378 19362638 19335378 19362638 - transcript1540.chr17.nic@B9D1 transcript1540.chr17.nic protein_coding 19362507,19360320,19357840,19347784,19347269,19343790,19335378 19362638,19360388,19357951,19347880,19347331,19343857,19337748 Gene ID= ENSG00000108641.14 TPM= 4.53 Transcript Type= NA chr17 19343170 19362713 19343170 19362713 - ENST00000261499.8@B9D1 ENST00000261499.8 protein_coding 19362507,19360320,19357840,19347784,19347269,19343790,19343170 19362713,19360388,19357951,19347880,19347331,19343857,19343461 Gene ID= ENSG00000108641.14 TPM= 11.77 Transcript Type= protein_coding chr17 19377721 19383543 19377721 19383543 + ENST00000308406.9@MAPK7 ENST00000308406.9 protein_coding 19377721,19378896,19379782,19380608,19381781,19382813,19383078 19378101,19379132,19379947,19381686,19382466,19382946,19383543 Gene ID= ENSG00000166484.19 TPM= 11.26 Transcript Type= protein_coding chr17 19378253 19383544 19378253 19383544 + ENST00000395602.8@MAPK7 ENST00000395602.8 protein_coding 19378253,19378896,19379782,19380608,19381781,19382813,19383078 19378542,19379132,19379947,19381686,19382466,19382946,19383544 Gene ID= ENSG00000166484.19 TPM= 6.73 Transcript Type= protein_coding chr17 19378323 19383544 19378323 19383544 + ENST00000395604.7@MAPK7 ENST00000395604.7 protein_coding 19378323,19378896,19379782,19380608,19381781,19382813,19383078 19378630,19379132,19379947,19381686,19382466,19382946,19383544 Gene ID= ENSG00000166484.19 TPM= 36.61 Transcript Type= protein_coding chr17 19378028 19383545 19378028 19383545 + transcript1556.chr17.nic@MAPK7 transcript1556.chr17.nic protein_coding 19378028,19379782,19380608,19381781,19382813,19383078 19379132,19379947,19381686,19382466,19382946,19383545 Gene ID= ENSG00000166484.19 TPM= 4.01 Transcript Type= NA chr17 19378484 19383545 19378484 19383545 + transcript1558.chr17.nic@MAPK7 transcript1558.chr17.nic protein_coding 19378484,19378896,19379782,19380608,19382813,19383078 19378542,19379132,19379947,19382466,19382946,19383545 Gene ID= ENSG00000166484.19 TPM= 3.11 Transcript Type= NA chr17 19378466 19383545 19378466 19383545 + transcript1560.chr17.nic@MAPK7 transcript1560.chr17.nic protein_coding 19378466,19378896,19379782,19380608,19382813,19383078 19378630,19379132,19379947,19382466,19382946,19383545 Gene ID= ENSG00000166484.19 TPM= 4.92 Transcript Type= NA chr17 19378892 19383544 19378892 19383544 + ENST00000490660.2@MAPK7 ENST00000490660.2 protein_coding 19378892,19379782,19380608,19382813,19383078 19379132,19379947,19382466,19382946,19383544 Gene ID= ENSG00000166484.19 TPM= 2.2 Transcript Type= retained_intron chr17 19383442 19387190 19383442 19387190 - ENST00000395592.6@MFAP4 ENST00000395592.6 protein_coding 19387041,19386760,19386310,19385358,19385099,19383442 19387190,19386838,19386464,19385454,19385281,19384709 Gene ID= ENSG00000166482.11 TPM= 10.11 Transcript Type= protein_coding chr17 19383442 19387240 19383442 19387240 - ENST00000299610.4@MFAP4 ENST00000299610.4 protein_coding 19387150,19386760,19386310,19385358,19385099,19383442 19387240,19386838,19386464,19385454,19385281,19384709 Gene ID= ENSG00000166482.11 TPM= 87.99 Transcript Type= protein_coding chr17 19533812 19579044 19533812 19579044 + transcript1586.chr17.nic@SLC47A1 transcript1586.chr17.nic protein_coding 19533812,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19572780,19577327 19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19572861,19579044 Gene ID= ENSG00000142494.13 TPM= 30.4 Transcript Type= NA chr17 19533811 19579012 19533811 19579012 + transcript1592.chr17.nic@SLC47A1 transcript1592.chr17.nic protein_coding 19533811,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19577327 19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19579012 Gene ID= ENSG00000142494.13 TPM= 9.42 Transcript Type= NA chr17 19533854 19579034 19533854 19579034 + ENST00000270570.8@SLC47A1 ENST00000270570.8 protein_coding 19533854,19542393,19546435,19547985,19549635,19551424,19555212,19555593,19555796,19555995,19560188,19560418,19566790,19567096,19571478,19572780,19577327 19534074,19542494,19546503,19548133,19549677,19551468,19555309,19555690,19555909,19556062,19560296,19560493,19566859,19567228,19571572,19572861,19579034 Gene ID= ENSG00000142494.13 TPM= 139.97 Transcript Type= protein_coding chr17 19550700 19647148 19550700 19647148 - transcript1612.chr17.nnic@AC025627.1 transcript1612.chr17.nnic antisense_RNA 19646937,19564523,19550700 19647148,19564629,19552353 Gene ID= ENSG00000262769.1 TPM= 1.81 Transcript Type= NA chr17 19577173 19647161 19577173 19647161 - transcript1615.chr17.nnic@AC025627.1 transcript1615.chr17.nnic antisense_RNA 19646937,19615452,19577173 19647161,19615602,19577511 Gene ID= ENSG00000262769.1 TPM= 1.81 Transcript Type= NA chr17 19577175 19647152 19577175 19647152 - transcript1617.chr17.nnic@AC025627.1 transcript1617.chr17.nnic antisense_RNA 19646937,19582117,19577175 19647152,19582264,19580355 Gene ID= ENSG00000262769.1 TPM= 2.63 Transcript Type= NA chr17 19577175 19647161 19577175 19647161 - transcript1619.chr17.nnic@AC025627.1 transcript1619.chr17.nnic antisense_RNA 19646937,19615452,19577175 19647161,19615602,19580355 Gene ID= ENSG00000262769.1 TPM= 4.44 Transcript Type= NA chr17 19648723 19677596 19648723 19677596 + ENST00000395575.6@ALDH3A2 ENST00000395575.6 protein_coding 19648723,19648935,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19675558 19648843,19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19677596 Gene ID= ENSG00000072210.18 TPM= 79.69 Transcript Type= protein_coding chr17 19648751 19677596 19648751 19677596 + ENST00000339618.8@ALDH3A2 ENST00000339618.8 protein_coding 19648751,19651547,19652547,19656366,19657745,19661127,19663333,19664948,19671721,19673151,19675558 19649124,19651778,19652632,19656574,19657862,19661268,19663499,19665047,19671956,19673275,19677596 Gene ID= ENSG00000072210.18 TPM= 39.55 Transcript Type= protein_coding chr17 19770830 19867936 19770830 19867936 - ENST00000361658.6@ULK2 ENST00000361658.6 protein_coding 19867328,19865736,19864803,19849742,19849369,19846737,19845304,19843121,19841489,19838501,19826139,19825094,19816749,19810378,19804693,19801777,19799495,19797396,19796095,19795622,19785937,19783697,19781889,19780986,19780472,19777581,19776309,19770830 19867936,19865828,19864844,19849774,19849405,19846910,19845377,19843222,19841547,19838583,19826186,19825182,19816920,19810438,19804830,19801922,19799575,19797682,19796282,19795725,19786086,19783905,19782067,19781104,19780629,19777716,19776407,19771067 Gene ID= ENSG00000083290.19 TPM= 1.81 Transcript Type= protein_coding chr17 19904769 19977862 19904769 19977862 - transcript1665.chr17.nic@AKAP10 transcript1665.chr17.nic protein_coding 19977592,19968414,19962840,19958014,19947407,19941826,19939713,19936286,19931805,19924408,19920036,19909926,19909181,19904769 19977862,19968461,19963022,19958571,19947505,19941910,19939849,19936430,19931978,19924517,19920118,19909978,19909276,19906232 Gene ID= ENSG00000108599.14 TPM= 1.81 Transcript Type= NA chr17 19904302 19977837 19904302 19977837 - ENST00000225737.10@AKAP10 ENST00000225737.10 protein_coding 19977592,19968414,19962840,19958014,19947407,19941826,19940887,19939713,19936286,19931805,19924408,19920036,19909926,19909181,19904302 19977837,19968461,19963022,19958571,19947505,19941910,19941010,19939849,19936430,19931978,19924517,19920118,19909978,19909276,19906232 Gene ID= ENSG00000108599.14 TPM= 40.75 Transcript Type= protein_coding chr17 20155989 20319026 20155989 20319026 + ENST00000395530.6@SPECC1 ENST00000395530.6 protein_coding 20155989,20204333,20227413,20231758,20232200,20245926,20247219,20253505,20257451,20260192,20296961,20306023,20313976 20156236,20205912,20227620,20231831,20232405,20246071,20247319,20253586,20257607,20260294,20297077,20306082,20319026 Gene ID= ENSG00000128487.16 TPM= 16.3 Transcript Type= protein_coding chr17 20155993 20314766 20155993 20314766 + transcript1670.chr17.nic@SPECC1 transcript1670.chr17.nic protein_coding 20155993,20227413,20231758,20232200,20245926,20247219,20253505,20257451,20260192,20296961,20306023,20313976 20156236,20227620,20231831,20232405,20246071,20247319,20253586,20257607,20260294,20297077,20306082,20314766 Gene ID= ENSG00000128487.16 TPM= 15.39 Transcript Type= NA chr17 20073610 20237168 20073610 20237168 + transcript1673.chr17.nic@SPECC1 transcript1673.chr17.nic protein_coding 20073610,20096631,20110427,20204333,20227413,20231758,20232200,20236860 20073701,20096798,20110562,20205912,20227620,20231831,20232405,20237168 Gene ID= ENSG00000128487.16 TPM= 2.72 Transcript Type= NA chr17 20156059 20238887 20156059 20238887 + transcript1675.chr17.nic@SPECC1 transcript1675.chr17.nic protein_coding 20156059,20227413,20231758,20232200,20236860 20156236,20227620,20231831,20232405,20238887 Gene ID= ENSG00000128487.16 TPM= 1.81 Transcript Type= NA chr17 20156089 20237179 20156089 20237179 + ENST00000395525.7@SPECC1 ENST00000395525.7 protein_coding 20156089,20204333,20227413,20231758,20232200,20236860 20156236,20205912,20227620,20231831,20232405,20237179 Gene ID= ENSG00000128487.16 TPM= 3.62 Transcript Type= protein_coding chr17 20999593 21043039 20999593 21043039 - ENST00000261497.8@USP22 ENST00000261497.8 protein_coding 21042665,21028542,21021113,21019084,21017942,21015752,21012830,21011151,21007870,21006896,21004928,21004202,20999593 21043039,21028674,21021226,21019185,21018111,21015899,21012935,21011309,21007996,21006987,21004990,21004351,21003073 Gene ID= ENSG00000124422.11 TPM= 118.63 Transcript Type= protein_coding chr17 21126652 21192030 21126652 21192030 + ENST00000395511.7@DHRS7B ENST00000395511.7 protein_coding 21126652,21172018,21178233,21183594,21184371,21188711,21190948 21126991,21172196,21178342,21183810,21184463,21188863,21192030 Gene ID= ENSG00000109016.17 TPM= 49.8 Transcript Type= protein_coding chr17 21197958 21214161 21197958 21214161 - ENST00000577419.5@TMEM11 ENST00000577419.5 protein_coding 21214091,21210936,21197958 21214161,21211227,21198840 Gene ID= ENSG00000178307.9 TPM= 19.92 Transcript Type= processed_transcript chr17 21238870 21253410 21238870 21253410 - ENST00000611551.1@NATD1 ENST00000611551.1 protein_coding 21253159,21244106,21238870 21253410,21244224,21243429 Gene ID= ENSG00000274180.1 TPM= 23.54 Transcript Type= protein_coding chr17 21284679 21315214 21284679 21315214 + transcript1685.chr17.nic@MAP2K3 transcript1685.chr17.nic protein_coding 21284679,21295675,21296086,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147 21284969,21295769,21296210,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315214 Gene ID= ENSG00000034152.18 TPM= 7.97 Transcript Type= NA chr17 21284679 21315214 21284679 21315214 + transcript1687.chr17.nic@MAP2K3 transcript1687.chr17.nic protein_coding 21284679,21295675,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147 21284969,21295769,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315214 Gene ID= ENSG00000034152.18 TPM= 5.25 Transcript Type= NA chr17 21284672 21315213 21284672 21315213 + ENST00000395491.6@MAP2K3 ENST00000395491.6 protein_coding 21284672,21296086,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147 21284969,21296210,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315213 Gene ID= ENSG00000034152.18 TPM= 12.5 Transcript Type= nonsense_mediated_decay chr17 21284672 21315240 21284672 21315240 + ENST00000342679.8@MAP2K3 ENST00000342679.8 protein_coding 21284672,21298413,21298878,21300545,21300874,21302143,21303183,21304426,21305051,21312142,21313492,21314147 21284969,21298479,21298926,21300658,21300993,21302259,21303234,21304553,21305128,21312281,21313537,21315240 Gene ID= ENSG00000034152.18 TPM= 122.97 Transcript Type= protein_coding chr17 21528310 21551680 21528310 21551680 - ENST00000391411.9@C17orf51 ENST00000391411.9 protein_coding 21550996,21528310 21551680,21535538 Gene ID= ENSG00000212719.10 TPM= 7.24 Transcript Type= protein_coding chr17 27294067 27313620 27294067 27313620 + transcript1703.chr17.nnic@WSB1 transcript1703.chr17.nnic protein_coding 27294067,27301788,27303367,27304780,27306782,27307744,27309100,27310061,27311509,27312210 27294435,27301956,27303635,27304911,27306882,27307919,27309272,27310174,27311616,27313620 Gene ID= ENSG00000109046.14 TPM= 4.23 Transcript Type= NA chr17 27294109 27313620 27294109 27313620 + transcript1705.chr17.nic@WSB1 transcript1705.chr17.nic protein_coding 27294109,27297187,27301788,27303367,27304780,27306782,27307744,27310061,27311509,27312210 27294435,27297308,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27313620 Gene ID= ENSG00000109046.14 TPM= 4.23 Transcript Type= NA chr17 27294080 27315926 27294080 27315926 + ENST00000262394.6@WSB1 ENST00000262394.6 protein_coding 27294080,27301788,27303367,27304780,27306782,27309100,27310061,27311509,27312210 27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27315926 Gene ID= ENSG00000109046.14 TPM= 41.66 Transcript Type= protein_coding chr17 27294067 27313620 27294067 27313620 + transcript1712.chr17.nic@WSB1 transcript1712.chr17.nic protein_coding 27294067,27301788,27303367,27304780,27306782,27310061,27311509,27312210 27294435,27301956,27303635,27304911,27309272,27310174,27311616,27313620 Gene ID= ENSG00000109046.14 TPM= 5.43 Transcript Type= NA chr17 27294093 27313631 27294093 27313631 + ENST00000467843.6@WSB1 ENST00000467843.6 protein_coding 27294093,27301788,27303367,27304780,27306782,27307744,27310061,27311509,27312210 27294435,27301956,27303635,27304911,27306882,27309272,27310174,27311616,27313631 Gene ID= ENSG00000109046.14 TPM= 40.45 Transcript Type= retained_intron chr17 27560285 27626433 27560285 27626433 + transcript1717.chr17.nic@KSR1 transcript1717.chr17.nic protein_coding 27560285,27577492,27582646,27585657,27588475,27590811,27592361,27592520,27597268,27603834,27604680,27605434,27607914,27609196,27610067,27611494,27617295,27623314 27560456,27577639,27583105,27585661,27588535,27590894,27592422,27592626,27597436,27603888,27604728,27605813,27608010,27609329,27610198,27611629,27617428,27626433 Gene ID= ENSG00000141068.13 TPM= 5.43 Transcript Type= NA chr17 27629798 27649560 27629798 27649560 + ENST00000395473.6@LGALS9 ENST00000395473.6 protein_coding 27629798,27638263,27640572,27642238,27643525,27645314,27645861,27646547,27647030,27647270,27648836 27631304,27638354,27640773,27642348,27643620,27645349,27645911,27646588,27647118,27647432,27649560 Gene ID= ENSG00000168961.16 TPM= 5.43 Transcript Type= protein_coding chr17 27629798 27649560 27629798 27649560 + ENST00000302228.9@LGALS9 ENST00000302228.9 protein_coding 27629798,27638263,27640572,27642238,27645314,27645861,27646547,27647030,27647270,27648836 27631304,27638354,27640773,27642348,27645349,27645911,27646588,27647118,27647432,27649560 Gene ID= ENSG00000168961.16 TPM= 16.3 Transcript Type= protein_coding chr17 27878315 27893366 27878315 27893366 - transcript1725.chr17.nnic@LYRM9 transcript1725.chr17.nnic protein_coding 27893317,27882939,27882569,27880274,27878315 27893366,27883130,27882712,27880366,27879490 Gene ID= ENSG00000232859.9 TPM= 7.85 Transcript Type= NA chr17 27878315 27883486 27878315 27883486 - transcript1727.chr17.nic@LYRM9 transcript1727.chr17.nic protein_coding 27882939,27882569,27880274,27878315 27883486,27882712,27880366,27879490 Gene ID= ENSG00000232859.9 TPM= 7.85 Transcript Type= NA chr17 27878319 27893371 27878319 27893371 - transcript1729.chr17.nic@LYRM9 transcript1729.chr17.nic protein_coding 27893317,27882569,27880121,27878319 27893371,27882712,27880366,27879490 Gene ID= ENSG00000232859.9 TPM= 3.32 Transcript Type= NA chr17 28319095 28328685 28319095 28328685 + ENST00000226230.7@TMEM97 ENST00000226230.7 protein_coding 28319095,28325503,28326534 28319365,28325647,28328685 Gene ID= ENSG00000109084.13 TPM= 59.77 Transcript Type= protein_coding chr17 28328332 28335495 28328332 28335495 - transcript1784.chr17.nic@IFT20 transcript1784.chr17.nic protein_coding 28335340,28331859,28330443,28328332 28335495,28331987,28330528,28329276 Gene ID= ENSG00000109083.13 TPM= 1.81 Transcript Type= NA chr17 28328329 28335440 28328329 28335440 - ENST00000395418.7@IFT20 ENST00000395418.7 protein_coding 28335340,28331859,28330443,28329173,28328329 28335440,28331987,28330528,28329276,28328733 Gene ID= ENSG00000109083.13 TPM= 19.92 Transcript Type= protein_coding chr17 28328329 28335449 28328329 28335449 - ENST00000585089.5@IFT20 ENST00000585089.5 protein_coding 28335340,28332146,28331859,28330443,28329173,28328329 28335449,28332382,28331987,28330528,28329276,28328733 Gene ID= ENSG00000109083.13 TPM= 2.72 Transcript Type= protein_coding chr17 28335765 28347008 28335765 28347008 + transcript1768.chr17.nnic@TNFAIP1 transcript1768.chr17.nnic protein_coding 28335765,28338583,28339408,28340309,28341237,28341404,28342247,28344364 28335856,28338707,28339726,28340478,28341326,28341456,28342442,28347008 Gene ID= ENSG00000109079.9 TPM= 1.81 Transcript Type= NA chr17 28335704 28347009 28335704 28347009 + ENST00000226225.6@TNFAIP1 ENST00000226225.6 protein_coding 28335704,28339408,28340309,28341237,28341404,28342247,28344364 28335856,28339726,28340478,28341326,28341456,28342442,28347009 Gene ID= ENSG00000109079.9 TPM= 99.61 Transcript Type= protein_coding chr17 28347177 28357522 28347177 28357522 - ENST00000540200.5@POLDIP2 ENST00000540200.5 protein_coding 28357288,28355795,28354488,28353695,28353241,28352912,28351664,28350766,28350438,28349083,28347177 28357522,28355876,28354585,28353791,28353316,28353019,28351800,28350792,28350563,28349162,28348231 Gene ID= ENSG00000004142.11 TPM= 528.84 Transcript Type= protein_coding chr17 28357636 28363690 28357636 28363690 + transcript1790.chr17.nic@TMEM199 transcript1790.chr17.nic protein_coding 28357636,28358916,28359315,28360151,28360529,28360735,28361157 28357881,28358989,28359404,28360238,28360571,28360847,28363690 Gene ID= ENSG00000244045.12 TPM= 2.26 Transcript Type= NA chr17 28357647 28363690 28357647 28363690 + transcript1792.chr17.nic@TMEM199 transcript1792.chr17.nic protein_coding 28357647,28360529,28360735,28361157 28359404,28360571,28360847,28363690 Gene ID= ENSG00000244045.12 TPM= 2.26 Transcript Type= NA chr17 28371662 28404049 28371662 28404049 + ENST00000585482.5@SARM1 ENST00000585482.5 protein_coding 28371662,28381203,28384357,28384839,28385040,28388174,28388350,28395905,28396157 28372502,28381821,28384569,28384930,28385275,28388276,28388539,28396026,28404049 Gene ID= ENSG00000004139.13 TPM= 44.37 Transcript Type= protein_coding chr17 28394642 28406509 28394642 28406509 - transcript1811.chr17.nic@SLC46A1 transcript1811.chr17.nic protein_coding 28406457,28405887,28404616,28402238,28400610,28394642 28406509,28405997,28405468,28402321,28400766,28399713 Gene ID= ENSG00000076351.12 TPM= 9.35 Transcript Type= NA chr17 28395676 28406201 28395676 28406201 - ENST00000618626.1@SLC46A1 ENST00000618626.1 protein_coding 28405887,28404616,28400610,28395676 28406201,28405468,28400766,28399713 Gene ID= ENSG00000076351.12 TPM= 9.66 Transcript Type= protein_coding chr17 28404316 28406168 28404316 28406168 - ENST00000582590.1@SLC46A1 ENST00000582590.1 protein_coding 28405887,28404316 28406168,28405468 Gene ID= ENSG00000076351.12 TPM= 5.43 Transcript Type= retained_intron chr17 28405139 28413583 28405139 28413583 + transcript1818.chr17.nnic@AC015917.2 transcript1818.chr17.nnic antisense_RNA 28405139,28406840,28411255,28411425 28405451,28406948,28411311,28413583 Gene ID= ENSG00000265254.1 TPM= 1.81 Transcript Type= NA chr17 28405240 28406796 28405240 28406796 + ENST00000580714.1@AC015917.2 ENST00000580714.1 antisense_RNA 28405240,28406516 28405451,28406796 Gene ID= ENSG00000265254.1 TPM= 1.81 Transcript Type= antisense_RNA chr17 28546707 28552668 28546707 28552668 - ENST00000335765.8@UNC119 ENST00000335765.8 protein_coding 28552338,28548592,28547999,28547677,28546707 28552668,28548705,28548101,28547849,28547409 Gene ID= ENSG00000109103.11 TPM= 53.88 Transcript Type= protein_coding chr17 28546708 28552631 28546708 28552631 - ENST00000301032.8@UNC119 ENST00000301032.8 protein_coding 28552338,28548592,28547999,28546708 28552631,28548705,28548101,28547849 Gene ID= ENSG00000109103.11 TPM= 13.13 Transcript Type= protein_coding chr17 28553387 28571872 28553387 28571872 - ENST00000308360.7@PIGS ENST00000308360.7 protein_coding 28571463,28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387 28571872,28571188,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495 Gene ID= ENSG00000087111.20 TPM= 88.29 Transcript Type= protein_coding chr17 28553387 28571536 28553387 28571536 - ENST00000395346.6@PIGS ENST00000395346.6 protein_coding 28571049,28570852,28563818,28563431,28561422,28560049,28558476,28556827,28556166,28554851,28553387 28571536,28570963,28563907,28563522,28561629,28560191,28558590,28556972,28556266,28555061,28554495 Gene ID= ENSG00000087111.20 TPM= 25.81 Transcript Type= protein_coding chr17 28573115 28576948 28573115 28576948 - ENST00000395321.6@ALDOC ENST00000395321.6 protein_coding 28576801,28575965,28575421,28575123,28574952,28574696,28574494,28574067,28573735,28573115 28576948,28576020,28575544,28575334,28575006,28574856,28574577,28574241,28573934,28573621 Gene ID= ENSG00000109107.13 TPM= 5.43 Transcript Type= protein_coding chr17 28573115 28577264 28573115 28577264 - ENST00000226253.8@ALDOC ENST00000226253.8 protein_coding 28576801,28575421,28575123,28574952,28574696,28574494,28574067,28573735,28573115 28577264,28575544,28575334,28575006,28574856,28574577,28574241,28573934,28573621 Gene ID= ENSG00000109107.13 TPM= 25.36 Transcript Type= protein_coding chr17 28634313 28645200 28634313 28645200 - transcript1839.chr17.nic@KIAA0100 transcript1839.chr17.nic protein_coding 28644989,28644058,28643610,28643164,28642869,28642275,28641889,28640560,28639901,28639575,28639315,28638524,28638252,28637836,28636965,28634313 28645200,28644187,28643659,28643311,28642987,28642335,28642078,28640683,28640025,28639642,28639460,28638642,28638415,28638094,28637170,28635609 Gene ID= ENSG00000007202.14 TPM= 3.17 Transcript Type= NA chr17 28614440 28645131 28614440 28645131 - ENST00000528896.6@KIAA0100 ENST00000528896.6 protein_coding 28644989,28644058,28643610,28643164,28642869,28642275,28641889,28640560,28639901,28639575,28639315,28638524,28638252,28637836,28636965,28634517,28633895,28633549,28633283,28632942,28632049,28631820,28631479,28628265,28624233,28623760,28621399,28620988,28620509,28619860,28619654,28618791,28617232,28616889,28616618,28616379,28616096,28615664,28614440 28645131,28644187,28643659,28643311,28642987,28642335,28642078,28640683,28640025,28639642,28639460,28638642,28638415,28638094,28637170,28635609,28634086,28633751,28633401,28633162,28632239,28631919,28631681,28628559,28624390,28623966,28621498,28621170,28620630,28620015,28619775,28618971,28617318,28616999,28616753,28616509,28616197,28615798,28615246 Gene ID= ENSG00000007202.14 TPM= 42.11 Transcript Type= protein_coding chr17 28648590 28661906 28648590 28661906 - transcript1842.chr17.nnic@SDF2 transcript1842.chr17.nnic protein_coding 28661726,28658201,28655287,28648590 28661906,28659891,28655483,28649276 Gene ID= ENSG00000132581.9 TPM= 2.72 Transcript Type= NA chr17 28648590 28661917 28648590 28661917 - transcript1855.chr17.nic@SDF2 transcript1855.chr17.nic protein_coding 28661726,28655287,28648590 28661917,28655483,28649137 Gene ID= ENSG00000132581.9 TPM= 4.83 Transcript Type= NA chr17 28648589 28662180 28648589 28662180 - ENST00000585749.5@SDF2 ENST00000585749.5 protein_coding 28662046,28648589 28662180,28649276 Gene ID= ENSG00000132581.9 TPM= 1.2 Transcript Type= processed_transcript chr17 28648589 28662185 28648589 28662185 - ENST00000592250.5@SDF2 ENST00000592250.5 protein_coding 28662046,28655287,28648589 28662185,28655483,28649276 Gene ID= ENSG00000132581.9 TPM= 9.35 Transcript Type= processed_transcript chr17 28703197 28711854 28703197 28711854 - ENST00000301039.6@PROCA1 ENST00000301039.6 protein_coding 28711570,28704708,28704307,28703197 28711854,28704843,28704435,28704212 Gene ID= ENSG00000167525.13 TPM= 3.62 Transcript Type= protein_coding chr17 28714284 28718415 28714284 28718415 - ENST00000301043.10@RAB34 ENST00000301043.10 protein_coding 28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714284 28718415,28717425,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710 Gene ID= ENSG00000109113.19 TPM= 77.95 Transcript Type= protein_coding chr17 28714283 28718182 28714283 28718182 - transcript1862.chr17.nic@RAB34 transcript1862.chr17.nic protein_coding 28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714283 28718182,28717593,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710 Gene ID= ENSG00000109113.19 TPM= 8.22 Transcript Type= NA chr17 28714283 28718210 28714283 28718210 - transcript1866.chr17.nic@RAB34 transcript1866.chr17.nic protein_coding 28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715219,28715032,28714793,28714283 28718210,28717425,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710 Gene ID= ENSG00000109113.19 TPM= 15.89 Transcript Type= NA chr17 28714281 28717890 28714281 28717890 - ENST00000395245.8@RAB34 ENST00000395245.8 protein_coding 28717213,28716903,28715993,28715800,28715641,28715456,28715195,28715032,28714793,28714281 28717890,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710 Gene ID= ENSG00000109113.19 TPM= 64.37 Transcript Type= protein_coding chr17 28714285 28718183 28714285 28718183 - ENST00000415040.6@RAB34 ENST00000415040.6 protein_coding 28718122,28717213,28716903,28715800,28715641,28715456,28715195,28715032,28714793,28714285 28718183,28717425,28716994,28715901,28715705,28715507,28715276,28715122,28714900,28714710 Gene ID= ENSG00000109113.19 TPM= 2.49 Transcript Type= protein_coding chr17 28714285 28718166 28714285 28718166 - ENST00000450529.5@RAB34 ENST00000450529.5 protein_coding 28718122,28717213,28716903,28715993,28715800,28715641,28715456,28715219,28715032,28714793,28714285 28718166,28717291,28716994,28716058,28715901,28715705,28715507,28715276,28715122,28714900,28714710 Gene ID= ENSG00000109113.19 TPM= 6.84 Transcript Type= protein_coding chr17 28719393 28724359 28719393 28724359 + ENST00000422514.6@RPL23A ENST00000422514.6 protein_coding 28719393,28720707,28722723,28723571,28723867 28720030,28720890,28722899,28723640,28724359 Gene ID= ENSG00000198242.13 TPM= 492.62 Transcript Type= protein_coding chr17 28724348 28726208 28724348 28726208 - ENST00000292090.7@TLCD1 ENST00000292090.7 protein_coding 28725904,28725481,28725304,28724348 28726208,28725563,28725386,28724893 Gene ID= ENSG00000160606.10 TPM= 6.34 Transcript Type= protein_coding chr17 28728016 28743456 28728016 28743456 + transcript1879.chr17.nnic@NEK8 transcript1879.chr17.nnic protein_coding 28728016,28733983,28734772,28735240,28737306,28737675,28737819,28738095,28738671,28739084,28740463,28740822,28741078,28741413,28741959 28728256,28734188,28735004,28735371,28737514,28737736,28738000,28738245,28738747,28739201,28740613,28740985,28741236,28741571,28743456 Gene ID= ENSG00000160602.13 TPM= 2.72 Transcript Type= NA chr17 28728757 28743456 28728757 28743456 + transcript1885.chr17.nic@NEK8 transcript1885.chr17.nic protein_coding 28728757,28733983,28734772,28737306,28737819,28738095,28738671,28739084,28740463,28740822,28741078,28741413,28741959 28728860,28734188,28735371,28737736,28738000,28738245,28738747,28739201,28740613,28740985,28741236,28741571,28743456 Gene ID= ENSG00000160602.13 TPM= 2.72 Transcript Type= NA chr17 28728780 28743455 28728780 28743455 + ENST00000268766.10@NEK8 ENST00000268766.10 protein_coding 28728780,28733983,28734772,28735240,28737306,28737675,28737819,28738095,28738671,28739084,28740463,28740822,28741078,28741413,28741959 28728860,28734188,28735004,28735371,28737514,28737736,28738000,28738245,28738747,28739201,28740613,28740985,28741236,28741571,28743455 Gene ID= ENSG00000160602.13 TPM= 15.39 Transcript Type= protein_coding chr17 28743984 28750958 28743984 28750958 + ENST00000262395.9@TRAF4 ENST00000262395.9 protein_coding 28743984,28747213,28747843,28748017,28748262,28748511,28748945 28744255,28747264,28747947,28748178,28748423,28748666,28750958 Gene ID= ENSG00000076604.14 TPM= 20.83 Transcript Type= protein_coding chr17 28755980 28842823 28755980 28842823 - ENST00000581407.5@FAM222B ENST00000581407.5 protein_coding 28842682,28766586,28755980 28842823,28766707,28759876 Gene ID= ENSG00000173065.13 TPM= 4.53 Transcript Type= protein_coding chr17 28854938 28861067 28854938 28861067 + ENST00000254928.9@ERAL1 ENST00000254928.9 protein_coding 28854938,28856264,28856505,28857939,28858146,28858374,28858576,28858964,28859203,28860431 28855317,28856391,28856582,28857985,28858207,28858486,28858824,28859113,28859283,28861067 Gene ID= ENSG00000132591.11 TPM= 85.57 Transcript Type= protein_coding chr17 28854964 28861061 28854964 28861061 + transcript1898.chr17.nic@ERAL1 transcript1898.chr17.nic protein_coding 28854964,28856264,28856505,28857939,28858146,28858374,28858576,28858964,28859203,28860577 28855317,28856391,28856582,28857985,28858207,28858486,28858824,28859113,28859283,28861061 Gene ID= ENSG00000132591.11 TPM= 4.98 Transcript Type= NA chr17 28879335 28897746 28879335 28897746 - transcript1908.chr17.nic@FLOT2 transcript1908.chr17.nic protein_coding 28897526,28888945,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879335 28897746,28889026,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599 Gene ID= ENSG00000132589.15 TPM= 14.26 Transcript Type= NA chr17 28879335 28897679 28879335 28897679 - ENST00000394908.8@FLOT2 ENST00000394908.8 protein_coding 28897526,28888945,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879335 28897679,28889026,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599 Gene ID= ENSG00000132589.15 TPM= 82.63 Transcript Type= protein_coding chr17 28879341 28897652 28879341 28897652 - ENST00000585169.5@FLOT2 ENST00000585169.5 protein_coding 28897526,28888945,28885857,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879341 28897652,28889026,28885947,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599 Gene ID= ENSG00000132589.15 TPM= 16.98 Transcript Type= protein_coding chr17 28879339 28897653 28879339 28897653 - ENST00000580805.5@FLOT2 ENST00000580805.5 protein_coding 28897526,28888945,28885857,28884225,28883108,28882573,28882337,28882118,28881814,28881192,28880713,28879339 28897653,28889026,28885947,28884315,28883231,28882691,28882450,28882237,28882028,28881375,28880862,28880599 Gene ID= ENSG00000132589.15 TPM= 9.28 Transcript Type= nonsense_mediated_decay chr17 28897781 28903071 28897781 28903071 - ENST00000378895.8@DHRS13 ENST00000378895.8 protein_coding 28902818,28902583,28901493,28900990,28897781 28903071,28902701,28901616,28901301,28898892 Gene ID= ENSG00000167536.13 TPM= 43.01 Transcript Type= protein_coding chr17 28897781 28903071 28897781 28903071 - ENST00000394901.7@DHRS13 ENST00000394901.7 protein_coding 28902583,28901493,28900990,28897781 28903071,28901616,28901301,28898892 Gene ID= ENSG00000167536.13 TPM= 17.66 Transcript Type= protein_coding chr17 29073519 29140417 29073519 29140417 - transcript1918.chr17.nnic@MYO18A transcript1918.chr17.nnic protein_coding 29140340,29122166,29121851,29121547,29120998,29120616,29119335,29118377,29118045,29116444,29115664,29115351,29114907,29114011,29111722,29111424,29110461,29092343,29090810,29090532,29089961,29086936,29086438,29082316,29073519 29140417,29122253,29121957,29121723,29121211,29120758,29119435,29118440,29118189,29116455,29115840,29115441,29115099,29114097,29111863,29111583,29110622,29092434,29090926,29090615,29090098,29087121,29086577,29082438,29074914 Gene ID= ENSG00000196535.15 TPM= 1.81 Transcript Type= NA chr17 29073519 29180364 29073519 29180364 - ENST00000531253.5@MYO18A ENST00000531253.5 protein_coding 29180313,29165942,29122166,29121851,29121547,29120998,29120616,29119335,29118377,29118045,29116444,29115664,29115351,29114907,29114011,29111722,29111424,29110436,29109858,29107080,29103599,29099634,29098826,29098356,29098105,29097788,29097223,29096761,29094936,29094650,29093980,29093323,29092855,29092343,29090810,29090532,29089961,29086936,29086438,29082316,29073519 29180364,29167021,29122253,29121957,29121723,29121211,29120758,29119435,29118440,29118189,29116455,29115840,29115441,29115099,29114097,29111863,29111583,29110622,29110101,29107189,29103664,29099762,29098969,29098445,29098224,29097899,29097350,29096915,29095059,29094850,29094090,29093427,29093001,29092456,29090926,29090615,29090098,29087121,29086577,29082438,29074914 Gene ID= ENSG00000196535.15 TPM= 7.24 Transcript Type= protein_coding chr17 29255836 29294118 29255836 29294118 - ENST00000225388.8@NUFIP2 ENST00000225388.8 protein_coding 29293783,29285992,29267498,29255836 29294118,29287716,29267530,29264591 Gene ID= ENSG00000108256.8 TPM= 18.11 Transcript Type= protein_coding chr17 29567207 29573163 29567207 29573163 + transcript1945.chr17.nic@TP53I13 transcript1945.chr17.nic protein_coding 29567207,29568278,29569318,29571591,29571857,29572142,29572812 29567411,29569086,29569359,29571719,29572057,29572697,29573163 Gene ID= ENSG00000167543.15 TPM= 3.62 Transcript Type= NA chr17 29568694 29573163 29568694 29573163 + transcript1955.chr17.nnic@TP53I13 transcript1955.chr17.nnic protein_coding 29568694,29569018,29569318,29571857,29572142,29572812 29568830,29569086,29569359,29572057,29572697,29573163 Gene ID= ENSG00000167543.15 TPM= 8.15 Transcript Type= NA chr17 29568644 29573157 29568644 29573157 + ENST00000301057.7@TP53I13 ENST00000301057.7 protein_coding 29568644,29569018,29569318,29571591,29571857,29572142,29572812 29568830,29569086,29569359,29571719,29572057,29572697,29573157 Gene ID= ENSG00000167543.15 TPM= 116.82 Transcript Type= protein_coding chr17 29573476 29589657 29573476 29589657 - transcript1926.chr17.nnic@GIT1 transcript1926.chr17.nnic protein_coding 29589550,29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573476 29589657,29589437,29583616,29583037,29582803,29582144,29581836,29581380,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914 Gene ID= ENSG00000108262.15 TPM= 10.87 Transcript Type= NA chr17 29573469 29589627 29573469 29589627 - ENST00000225394.7@GIT1 ENST00000225394.7 protein_coding 29589327,29583483,29582925,29582698,29581927,29581742,29581338,29578731,29578299,29577645,29577136,29576863,29576522,29576220,29576078,29575812,29575630,29575288,29575079,29573469 29589627,29583616,29583037,29582803,29582144,29581836,29581380,29578779,29578371,29577742,29577247,29576996,29576674,29576450,29576131,29575898,29575703,29575470,29575142,29574914 Gene ID= ENSG00000108262.15 TPM= 55.24 Transcript Type= protein_coding chr17 29614979 29622912 29614979 29622912 - transcript1961.chr17.nic@CORO6 transcript1961.chr17.nic protein_coding 29622688,29621224,29619651,29619060,29618790,29617478,29617242,29616938,29616702,29616279,29615945,29614979 29622912,29621484,29619773,29619189,29618971,29618632,29617340,29617042,29616847,29616336,29616175,29615854 Gene ID= ENSG00000167549.18 TPM= 5.43 Transcript Type= NA chr17 29614763 29622899 29614763 29622899 - ENST00000459686.5@CORO6 ENST00000459686.5 protein_coding 29622688,29621224,29619651,29619060,29618790,29616938,29616702,29616279,29615945,29614763 29622899,29621423,29619773,29619189,29618971,29618632,29616847,29616336,29616175,29615854 Gene ID= ENSG00000167549.18 TPM= 2.72 Transcript Type= retained_intron chr17 30116781 30186475 30116781 30186475 + ENST00000247026.9@NSRP1 ENST00000247026.9 protein_coding 30116781,30118080,30172542,30178071,30179090,30180908,30184615 30116863,30118173,30172598,30178199,30179297,30181016,30186475 Gene ID= ENSG00000126653.17 TPM= 36.67 Transcript Type= protein_coding chr17 30116807 30186474 30116807 30186474 + ENST00000612959.4@NSRP1 ENST00000612959.4 protein_coding 30116807,30172542,30178071,30179090,30180908,30184615 30116863,30172598,30178199,30179297,30181016,30186474 Gene ID= ENSG00000126653.17 TPM= 3.17 Transcript Type= protein_coding chr17 30248195 30291994 30248195 30291994 - ENST00000261714.10@BLMH ENST00000261714.10 protein_coding 30291807,30291311,30289373,30287806,30286814,30285388,30274042,30272741,30272561,30271271,30266885,30248195 30291994,30291508,30289482,30287947,30286902,30285480,30274197,30272899,30272628,30271388,30266954,30249168 Gene ID= ENSG00000108578.14 TPM= 36.22 Transcript Type= protein_coding chr17 30477362 30527592 30477362 30527592 + ENST00000225724.9@GOSR1 ENST00000225724.9 protein_coding 30477362,30481143,30484214,30484663,30490126,30492679,30510880,30519939,30522254 30477464,30481263,30484301,30484770,30490217,30492753,30510909,30520021,30527592 Gene ID= ENSG00000108587.15 TPM= 39.84 Transcript Type= protein_coding chr17 30600371 30634327 30600371 30634327 + transcript1997.chr17.nnic@AC005562.1 transcript1997.chr17.nnic processed_transcript 30600371,30607552,30608430,30610889,30631755,30633098,30633994 30601012,30607665,30608562,30610942,30631979,30633390,30634327 Gene ID= ENSG00000214719.11 TPM= 2.72 Transcript Type= NA chr17 30600392 30634327 30600392 30634327 + transcript1998.chr17.nnic@AC005562.1 transcript1998.chr17.nnic processed_transcript 30600392,30607552,30608430,30610889,30631755,30633098,30633994 30600916,30607665,30608562,30610942,30631979,30633390,30634327 Gene ID= ENSG00000214719.11 TPM= 1.81 Transcript Type= NA chr17 30600493 30634327 30600493 30634327 + transcript1999.chr17.nnic@AC005562.1 transcript1999.chr17.nnic processed_transcript 30600493,30607552,30608430,30610889,30631755,30633994 30601012,30607665,30608562,30610942,30633390,30634327 Gene ID= ENSG00000214719.11 TPM= 1.81 Transcript Type= NA chr17 30731643 30770057 30731643 30770057 + transcript2011.chr17.nic@SUZ12P1 transcript2011.chr17.nic transcribed_unprocessed_pseudogene 30731643,30734897,30735033,30743301,30759491,30766503,30768834,30769872 30732123,30734943,30735097,30743369,30759539,30766588,30769064,30770057 Gene ID= ENSG00000264538.6 TPM= 2.72 Transcript Type= NA chr17 30782684 30824776 30782684 30824776 - ENST00000324238.6@CRLF3 ENST00000324238.6 protein_coding 30824523,30803901,30797311,30796160,30793450,30792440,30785919,30782684 30824776,30804108,30797398,30796337,30793672,30792572,30786031,30784443 Gene ID= ENSG00000176390.11 TPM= 17.21 Transcript Type= protein_coding chr17 30898983 30906820 30898983 30906820 - ENST00000581216.5@TEFM ENST00000581216.5 protein_coding 30906168,30904066,30900413,30898983 30906820,30904529,30900562,30899606 Gene ID= ENSG00000172171.10 TPM= 8.15 Transcript Type= protein_coding chr17 30921680 30959322 30921680 30959322 + ENST00000330889.7@ADAP2 ENST00000330889.7 protein_coding 30921680,30922940,30926827,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835 30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30959322 Gene ID= ENSG00000184060.10 TPM= 18.11 Transcript Type= protein_coding chr17 30921908 30959321 30921908 30959321 + transcript2025.chr17.nic@ADAP2 transcript2025.chr17.nic protein_coding 30921908,30922940,30926827,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835 30922108,30923070,30926918,30931968,30934297,30945053,30949370,30953350,30954555,30956391,30959321 Gene ID= ENSG00000184060.10 TPM= 3.62 Transcript Type= NA chr17 30921927 30959322 30921927 30959322 + transcript2032.chr17.nic@ADAP2 transcript2032.chr17.nic protein_coding 30921927,30922940,30931889,30934185,30944907,30949287,30953288,30954478,30956241,30957835 30922108,30923070,30931968,30934297,30945053,30949370,30953350,30954555,30956469,30959322 Gene ID= ENSG00000184060.10 TPM= 3.62 Transcript Type= NA chr17 30921934 30956629 30921934 30956629 + transcript2034.chr17.nic@ADAP2 transcript2034.chr17.nic protein_coding 30921934,30922940,30931889,30934185,30944907,30949287,30954478,30956241 30922108,30923070,30931968,30934297,30945053,30949370,30954555,30956629 Gene ID= ENSG00000184060.10 TPM= 1.81 Transcript Type= NA chr17 30970201 30999911 30970201 30999911 + ENST00000328381.9@RNF135 ENST00000328381.9 protein_coding 30970201,30984617,30987944,30997242,30998662 30971445,30984760,30988106,30997331,30999911 Gene ID= ENSG00000181481.13 TPM= 28.07 Transcript Type= protein_coding chr17 30971048 30999912 30971048 30999912 + transcript2043.chr17.nnic@RNF135 transcript2043.chr17.nnic protein_coding 30971048,30984617,30987944,30997242,30998662 30971746,30984760,30988106,30997331,30999912 Gene ID= ENSG00000181481.13 TPM= 3.02 Transcript Type= NA chr17 30971023 30999909 30971023 30999909 + ENST00000324689.8@RNF135 ENST00000324689.8 protein_coding 30971023,30984617,30997242,30998662 30971445,30984760,30997331,30999909 Gene ID= ENSG00000181481.13 TPM= 8.45 Transcript Type= protein_coding chr17 30971060 30999911 30971060 30999911 + ENST00000535306.6@RNF135 ENST00000535306.6 protein_coding 30971060,30984617,30987944,30993840,30997242,30998662 30971445,30984760,30988106,30993904,30997331,30999911 Gene ID= ENSG00000181481.13 TPM= 8.45 Transcript Type= protein_coding chr17 31303766 31314112 31303766 31314112 - ENST00000330927.4@EVI2B ENST00000330927.4 protein_coding 31313979,31303766 31314112,31305630 Gene ID= ENSG00000185862.6 TPM= 1.81 Transcript Type= protein_coding chr17 31851864 31859337 31851864 31859337 - ENST00000302362.10@COPRS ENST00000302362.10 protein_coding 31859101,31856799,31852812,31851864 31859337,31856865,31853030,31852308 Gene ID= ENSG00000172301.10 TPM= 54.33 Transcript Type= protein_coding chr17 31863174 31901741 31863174 31901741 - transcript2056.chr17.nic@UTP6 transcript2056.chr17.nic protein_coding 31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31866655,31865366,31863174 31901741,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31866715,31865438,31863516 Gene ID= ENSG00000108651.9 TPM= 2.72 Transcript Type= NA chr17 31860899 31901765 31860899 31901765 - ENST00000261708.8@UTP6 ENST00000261708.8 protein_coding 31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31880573,31878702,31878250,31875234,31873673,31873378,31868046,31865366,31860899 31901765,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31878781,31878327,31875413,31873753,31873487,31868112,31865438,31863516 Gene ID= ENSG00000108651.9 TPM= 27.17 Transcript Type= protein_coding chr17 31863174 31901741 31863174 31901741 - transcript2063.chr17.nic@UTP6 transcript2063.chr17.nic protein_coding 31901536,31899646,31894970,31894645,31892747,31892260,31889285,31887236,31885980,31884424,31878250,31875234,31873673,31873378,31868046,31865366,31863174 31901741,31899730,31895011,31894737,31892794,31892323,31889403,31887313,31886061,31884505,31880754,31875413,31873753,31873487,31868112,31865438,31863516 Gene ID= ENSG00000108651.9 TPM= 3.62 Transcript Type= NA chr17 31937003 32001046 31937003 32001046 + transcript2069.chr17.nnic@SUZ12 transcript2069.chr17.nnic protein_coding 31937003,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31988320,31993242,31993865,31994564,31995564,31996798,31998658 31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31988497,31993333,31994008,31994721,31995762,31996877,32001046 Gene ID= ENSG00000178691.10 TPM= 1.81 Transcript Type= NA chr17 31937018 32001045 31937018 32001045 + ENST00000322652.9@SUZ12 ENST00000322652.9 protein_coding 31937018,31940286,31940422,31947617,31966147,31973146,31975482,31976521,31982999,31988320,31993242,31993865,31994564,31995564,31996798,31998658 31937520,31940332,31940486,31947685,31966196,31973231,31975713,31976614,31983104,31988497,31993333,31994008,31994721,31995762,31996877,32001045 Gene ID= ENSG00000178691.10 TPM= 44.37 Transcript Type= protein_coding chr17 32007384 32053498 32007384 32053498 + transcript2076.chr17.nic@LRRC37B transcript2076.chr17.nic protein_coding 32007384,32020697,32021393,32024711,32027769,32030656,32031378,32034910,32035565,32045700,32047761,32049102,32050003,32053266 32008132,32020803,32022825,32024782,32027840,32030727,32031458,32034981,32035639,32045818,32047901,32049394,32050107,32053498 Gene ID= ENSG00000185158.12 TPM= 3.62 Transcript Type= NA chr17 32142494 32225773 32142494 32225773 + transcript2095.chr17.nnic@RHOT1 transcript2095.chr17.nnic protein_coding 32142494,32160007,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32224616 32142729,32160307,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32225773 Gene ID= ENSG00000126858.16 TPM= 2.72 Transcript Type= NA chr17 32142408 32253372 32142408 32253372 + transcript2098.chr17.nic@RHOT1 transcript2098.chr17.nic protein_coding 32142408,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32253085 32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32253372 Gene ID= ENSG00000126858.16 TPM= 5.89 Transcript Type= NA chr17 32142475 32225727 32142475 32225727 + ENST00000583994.5@RHOT1 ENST00000583994.5 protein_coding 32142475,32171043,32172937,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32209350,32224616 32142729,32171101,32173060,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32209445,32225727 Gene ID= ENSG00000126858.16 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr17 32142466 32225727 32142466 32225727 + ENST00000358365.7@RHOT1 ENST00000358365.7 protein_coding 32142466,32171043,32173831,32175319,32175962,32176161,32182757,32183171,32192201,32193136,32193987,32198947,32199405,32200956,32202770,32203890,32206910,32208107,32209350,32211116,32224616 32142729,32171101,32173912,32175362,32176015,32176213,32182865,32183272,32192299,32193244,32194107,32199031,32199550,32201056,32202900,32203973,32207029,32208309,32209445,32211238,32225727 Gene ID= ENSG00000126858.16 TPM= 6.79 Transcript Type= protein_coding chr17 32265834 32324660 32265834 32324660 + transcript2107.chr17.nnic@RHBDL3 transcript2107.chr17.nnic protein_coding 32265834,32288792,32294294,32298092,32305341,32316232,32320958 32266300,32289016,32294442,32298204,32305441,32316292,32324660 Gene ID= ENSG00000141314.12 TPM= 4.53 Transcript Type= NA chr17 32331591 32342209 32331591 32342209 - transcript2109.chr17.nnic@C17orf75 transcript2109.chr17.nnic protein_coding 32342000,32341204,32339813,32338208,32337897,32335323,32334775,32334469,32333417,32331591 32342209,32341284,32339938,32338351,32337954,32335349,32334839,32334605,32333520,32331978 Gene ID= ENSG00000108666.9 TPM= 2.26 Transcript Type= NA chr17 32328443 32342209 32328443 32342209 - ENST00000225805.8@C17orf75 ENST00000225805.8 protein_coding 32342000,32341204,32339813,32338210,32337897,32335323,32334775,32334469,32333417,32328443 32342209,32341284,32339938,32338351,32337956,32335442,32334839,32334605,32333520,32331978 Gene ID= ENSG00000108666.9 TPM= 2.26 Transcript Type= protein_coding chr17 32350117 32381886 32350117 32381886 + ENST00000394670.8@ZNF207 ENST00000394670.8 protein_coding 32350117,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32366665,32367772,32369295,32369599 32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32366757,32368014,32369454,32381886 Gene ID= ENSG00000010244.18 TPM= 28.07 Transcript Type= protein_coding chr17 32350126 32371889 32350126 32371889 + transcript2119.chr17.nic@ZNF207 transcript2119.chr17.nic protein_coding 32350126,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32366665,32367772,32369599 32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32366757,32369454,32371889 Gene ID= ENSG00000010244.18 TPM= 2.72 Transcript Type= NA chr17 32350126 32370448 32350126 32370448 + transcript2122.chr17.nic@ZNF207 transcript2122.chr17.nic protein_coding 32350126,32351786,32358503,32360598,32360892,32362914,32365330,32367772,32369295,32369599 32350326,32351912,32358641,32360765,32360967,32362984,32365487,32368014,32369454,32370448 Gene ID= ENSG00000010244.18 TPM= 3.62 Transcript Type= NA chr17 32350138 32370343 32350138 32370343 + ENST00000394673.6@ZNF207 ENST00000394673.6 protein_coding 32350138,32351786,32358503,32360598,32360892,32361468,32362914,32365330,32367772,32369295,32369599 32350326,32351912,32358641,32360765,32360967,32361515,32362984,32365487,32368014,32369454,32370343 Gene ID= ENSG00000010244.18 TPM= 22.64 Transcript Type= protein_coding chr17 32444261 32483318 32444261 32483318 + ENST00000261712.7@PSMD11 ENST00000261712.7 protein_coding 32444261,32446945,32454495,32464049,32464521,32468999,32473801,32474764,32477521,32479251,32479851,32480146,32480489,32480753 32444614,32447046,32454619,32464120,32464578,32469193,32473945,32474824,32477583,32479376,32479886,32480197,32480631,32483318 Gene ID= ENSG00000108671.9 TPM= 102.33 Transcript Type= protein_coding chr17 32444468 32482376 32444468 32482376 + transcript2130.chr17.nnic@PSMD11 transcript2130.chr17.nnic protein_coding 32444468,32446945,32454495,32464049,32464521,32468999,32473801,32474764,32477521,32479251,32479851,32480146,32480489,32481311 32444614,32447046,32454619,32464120,32464578,32469193,32473945,32474824,32477583,32479376,32479886,32480197,32480631,32482376 Gene ID= ENSG00000108671.9 TPM= 4.53 Transcript Type= NA chr17 32444474 32481471 32444474 32481471 + ENST00000457654.6@PSMD11 ENST00000457654.6 protein_coding 32444474,32446945,32454495,32464049,32464521,32468999,32473801,32474764,32477521,32479251,32479851,32480146,32480489 32444614,32447046,32454619,32464120,32464578,32469193,32473945,32474824,32477583,32479376,32479886,32480197,32481471 Gene ID= ENSG00000108671.9 TPM= 10.87 Transcript Type= protein_coding chr17 32486619 32491256 32486619 32491256 + ENST00000313401.3@CDK5R1 ENST00000313401.3 protein_coding 32486619,32487476 32487162,32491256 Gene ID= ENSG00000176749.8 TPM= 9.96 Transcript Type= protein_coding chr17 32927879 32941647 32927879 32941647 + transcript2143.chr17.nic@TMEM98 transcript2143.chr17.nic protein_coding 32927879,32931327,32933174,32934291,32936332,32939477,32940786 32928237,32931659,32933305,32934324,32936447,32939536,32941647 Gene ID= ENSG00000006042.11 TPM= 9.06 Transcript Type= NA chr17 32927910 32941613 32927910 32941613 + ENST00000394642.7@TMEM98 ENST00000394642.7 protein_coding 32927910,32931475,32933174,32934291,32936332,32939477,32940786 32928237,32931659,32933305,32934324,32936447,32939536,32941613 Gene ID= ENSG00000006042.11 TPM= 15.39 Transcript Type= protein_coding chr17 34255285 34257203 34255285 34257203 + ENST00000225831.4@CCL2 ENST00000225831.4 protein_coding 34255285,34256222,34256722 34255425,34256339,34257203 Gene ID= ENSG00000108691.9 TPM= 41.66 Transcript Type= protein_coding chr17 34319036 34321402 34319036 34321402 + ENST00000394620.1@CCL8 ENST00000394620.1 protein_coding 34319036,34320269,34320802 34319577,34320386,34321402 Gene ID= ENSG00000108700.4 TPM= 1.81 Transcript Type= protein_coding chr17 34356452 34358610 34356452 34358610 + ENST00000225844.6@CCL13 ENST00000225844.6 protein_coding 34356452,34357475,34358026 34356602,34357589,34358610 Gene ID= ENSG00000181374.7 TPM= 2.72 Transcript Type= protein_coding chr17 34927919 34961509 34927919 34961509 - ENST00000314144.9@CCT6B ENST00000314144.9 protein_coding 34961257,34959587,34958560,34954426,34951950,34942796,34942484,34940539,34939617,34939183,34932367,34930949,34928962,34927919 34961509,34959650,34958694,34954599,34952053,34942906,34942643,34940621,34939713,34939330,34932500,34931051,34929034,34928117 Gene ID= ENSG00000132141.13 TPM= 2.72 Transcript Type= protein_coding chr17 34980494 35009743 34980494 35009743 + ENST00000378526.8@LIG3 ENST00000378526.8 protein_coding 34980494,34983002,34985988,34989466,34990963,34991671,34991958,34992524,34994276,34996064,34996574,34997738,34998219,34998604,34999307,34999782,35001257,35001909,35002668,35004273 34980622,34983552,34986131,34989663,34991114,34991837,34992035,34992692,34994431,34996195,34996653,34997825,34998296,34998727,34999449,34999856,35001403,35002104,35002789,35009743 Gene ID= ENSG00000005156.11 TPM= 15.85 Transcript Type= protein_coding chr17 34980653 35005065 34980653 35005065 + transcript2158.chr17.nnic@LIG3 transcript2158.chr17.nnic protein_coding 34980653,34983002,34985988,34989466,34990963,34991671,34991958,34992524,34994276,34996064,34996574,34997738,34998219,34998604,34999307,34999782,35001257,35001909,35002668,35004273 34981557,34983552,34986131,34989663,34991114,34991837,34992035,34992692,34994431,34996195,34996653,34997825,34998296,34998727,34999449,34999856,35001403,35002104,35002789,35005065 Gene ID= ENSG00000005156.11 TPM= 5.89 Transcript Type= NA chr17 35009111 35063719 35009111 35063719 - transcript2168.chr17.nic@RFFL transcript2168.chr17.nic protein_coding 35063576,35026374,35017523,35016370,35014740,35009111 35063719,35026561,35017606,35016580,35014763,35012149 Gene ID= ENSG00000092871.16 TPM= 3.62 Transcript Type= NA chr17 35009111 35089339 35009111 35089339 - transcript2169.chr17.nic@RFFL transcript2169.chr17.nic protein_coding 35089105,35026374,35017523,35016370,35014740,35009111 35089339,35026561,35017606,35016580,35014763,35012149 Gene ID= ENSG00000092871.16 TPM= 6.34 Transcript Type= NA chr17 35092208 35119869 35092208 35119869 - ENST00000345365.10@RAD51D ENST00000345365.10 protein_coding 35119532,35119111,35118501,35107366,35106988,35106386,35103454,35103254,35101201,35092208 35119869,35119172,35118619,35107447,35107122,35106481,35103544,35103324,35101365,35101036 Gene ID= ENSG00000185379.20 TPM= 6.34 Transcript Type= protein_coding chr17 35131347 35142315 35131347 35142315 - ENST00000442241.8@NLE1 ENST00000442241.8 protein_coding 35142258,35141979,35139849,35139235,35137814,35137543,35137001,35136362,35136169,35135249,35133339,35133171,35131347 35142315,35142122,35140066,35139314,35137890,35137640,35137193,35136497,35136215,35135451,35133498,35133241,35132449 Gene ID= ENSG00000073536.17 TPM= 14.49 Transcript Type= protein_coding chr17 35243036 35273655 35243036 35273655 + ENST00000299977.8@SLFN5 ENST00000299977.8 protein_coding 35243036,35258651,35260971,35264183,35265072 35243143,35259702,35261096,35264903,35273655 Gene ID= ENSG00000166750.9 TPM= 13.58 Transcript Type= protein_coding chr17 35350312 35373622 35350312 35373622 - transcript2187.chr17.nic@SLFN11 transcript2187.chr17.nic protein_coding 35373474,35367603,35366947,35362739,35360243,35353336,35350312 35373622,35367700,35367063,35363826,35360371,35354059,35353139 Gene ID= ENSG00000172716.16 TPM= 6.79 Transcript Type= NA chr17 35350305 35373607 35350305 35373607 - ENST00000308377.8@SLFN11 ENST00000308377.8 protein_coding 35373474,35362739,35360243,35353336,35350305 35373607,35363826,35360371,35354059,35353139 Gene ID= ENSG00000172716.16 TPM= 2.26 Transcript Type= protein_coding chr17 35512384 35537731 35512384 35537731 - transcript2198.chr17.nnic@SLFN12L transcript2198.chr17.nnic protein_coding 35537573,35522279,35512384 35537731,35522969,35515321 Gene ID= ENSG00000205045.8 TPM= 2.72 Transcript Type= NA chr17 35574795 35578629 35574795 35578629 - ENST00000225873.8@PEX12 ENST00000225873.8 protein_coding 35577896,35577038,35574795 35578629,35577591,35576181 Gene ID= ENSG00000108733.9 TPM= 29.88 Transcript Type= protein_coding chr17 35587256 35660117 35587256 35660117 + transcript2208.chr17.nic@AP2B1 transcript2208.chr17.nic protein_coding 35587256,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35659764 35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35660117 Gene ID= ENSG00000006125.17 TPM= 1.81 Transcript Type= NA chr17 35587274 35726409 35587274 35726409 + ENST00000621914.4@AP2B1 ENST00000621914.4 protein_coding 35587274,35594008,35598230,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35671754,35674176,35682695,35709224,35710234,35717195,35723625 35587428,35594067,35598335,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35671900,35674321,35682824,35709308,35710320,35717349,35726409 Gene ID= ENSG00000006125.17 TPM= 18.56 Transcript Type= protein_coding chr17 35587314 35724089 35587314 35724089 + ENST00000620039.4@AP2B1 ENST00000620039.4 protein_coding 35587314,35594008,35598230,35600986,35605705,35608142,35624397,35626621,35627385,35627631,35636341,35639595,35641877,35650530,35657599,35671754,35674176,35682695,35709224,35710234,35717195,35723625 35587428,35594067,35598335,35601071,35605840,35608387,35624587,35626842,35627505,35627726,35636456,35639760,35641975,35650789,35657791,35671900,35674321,35682824,35709308,35710320,35717349,35724089 Gene ID= ENSG00000006125.17 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr17 35731649 35743521 35731649 35743521 + ENST00000603017.1@RASL10B ENST00000603017.1 protein_coding 35731649,35735038,35740409,35741035 35731878,35735400,35740533,35743521 Gene ID= ENSG00000270885.1 TPM= 17.21 Transcript Type= protein_coding chr17 35771846 35795614 35771846 35795614 - transcript2216.chr17.nic@MMP28 transcript2216.chr17.nic protein_coding 35795267,35779244,35778888,35771846 35795614,35779323,35779075,35773404 Gene ID= ENSG00000271447.5 TPM= 2.72 Transcript Type= NA chr17 35809455 35847242 35809455 35847242 + ENST00000605844.5@TAF15 ENST00000605844.5 protein_coding 35809455,35817716,35820024,35820164,35820332,35822640,35824078,35833907,35834566,35836132,35838424,35842367,35844077,35844280,35844477,35846906 35809576,35817755,35820075,35820248,35820437,35822833,35824198,35833941,35834598,35836241,35838553,35842459,35844158,35844368,35845038,35847242 Gene ID= ENSG00000270647.5 TPM= 5.43 Transcript Type= protein_coding chr17 35871491 35880508 35871491 35880508 - ENST00000603197.5@CCL5 ENST00000603197.5 protein_coding 35880230,35878528,35871491 35880508,35878639,35872464 Gene ID= ENSG00000271503.5 TPM= 4.53 Transcript Type= protein_coding chr17 35997582 36002038 35997582 36002038 - ENST00000617897.1@CCL15 ENST00000617897.1 protein_coding 36001417,35998866,35998280,35997582 36002038,35998925,35998391,35997860 Gene ID= ENSG00000275718.1 TPM= 2.72 Transcript Type= protein_coding chr17 36013058 36017968 36013058 36017968 - ENST00000615050.1@CCL23 ENST00000615050.1 protein_coding 36017822,36014334,36013744,36013058 36017968,36014393,36013909,36013308 Gene ID= ENSG00000274736.4 TPM= 2.72 Transcript Type= protein_coding chr17 36088256 36090141 36088256 36090141 - ENST00000613922.1@CCL3 ENST00000613922.1 protein_coding 36089986,36089183,36088256 36090141,36089297,36088762 Gene ID= ENSG00000277632.1 TPM= 12.68 Transcript Type= protein_coding chr17 36088256 36090169 36088256 36090169 - ENST00000614051.1@CCL3 ENST00000614051.1 protein_coding 36089183,36088256 36090169,36088762 Gene ID= ENSG00000277632.1 TPM= 1.81 Transcript Type= retained_intron chr17 36103590 36105621 36103590 36105621 + ENST00000615863.1@CCL4 ENST00000615863.1 protein_coding 36103590,36104528,36105225 36103981,36104642,36105621 Gene ID= ENSG00000275302.1 TPM= 1.81 Transcript Type= protein_coding chr17 36194869 36196758 36194869 36196758 - ENST00000619989.1@CCL3L3 ENST00000619989.1 protein_coding 36196598,36195798,36194869 36196758,36195912,36195376 Gene ID= ENSG00000276085.1 TPM= 1.81 Transcript Type= protein_coding chr17 36486635 36495822 36486635 36495822 + ENST00000617429.4@ZNHIT3 ENST00000617429.4 protein_coding 36486635,36486935,36492813,36493926,36495223 36486785,36486966,36492899,36494006,36495822 Gene ID= ENSG00000273611.4 TPM= 16.3 Transcript Type= protein_coding chr17 36486629 36495823 36486629 36495823 + ENST00000619730.4@ZNHIT3 ENST00000619730.4 protein_coding 36486629,36492813,36493926,36495223 36486785,36492899,36494006,36495823 Gene ID= ENSG00000273611.4 TPM= 6.34 Transcript Type= protein_coding chr17 36513086 36534868 36513086 36534868 - ENST00000621344.4@MYO19 ENST00000621344.4 protein_coding 36534761,36533953,36532527,36528064,36527551,36525228,36515858,36515113,36514446,36513629,36513086 36534868,36534104,36532681,36528202,36527699,36525341,36515990,36515182,36514548,36513725,36513505 Gene ID= ENSG00000278259.4 TPM= 5.43 Transcript Type= protein_coding chr17 36535555 36539310 36535555 36539310 + ENST00000620233.1@PIGW ENST00000620233.1 protein_coding 36535555,36537094 36535601,36539310 Gene ID= ENSG00000277161.1 TPM= 3.62 Transcript Type= protein_coding chr17 36544888 36589848 36544888 36589848 + ENST00000613102.4@GGNBP2 ENST00000613102.4 protein_coding 36544888,36545619,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208 36545097,36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589848 Gene ID= ENSG00000278311.4 TPM= 25.81 Transcript Type= protein_coding chr17 36545483 36589844 36545483 36589844 + transcript2251.chr17.nic@GGNBP2 transcript2251.chr17.nic protein_coding 36545483,36554820,36557083,36560773,36567663,36577983,36579245,36581344,36585300,36585840,36586050,36586997,36589208 36545817,36554900,36557336,36560871,36567776,36578186,36579419,36581538,36585450,36585965,36586198,36587245,36589844 Gene ID= ENSG00000278311.4 TPM= 55.69 Transcript Type= NA chr17 36544912 36547747 36544912 36547747 + ENST00000611219.1@GGNBP2 ENST00000611219.1 protein_coding 36544912,36545619 36545097,36547747 Gene ID= ENSG00000278311.4 TPM= 2.72 Transcript Type= protein_coding chr17 36591798 36600806 36591798 36600806 + ENST00000618403.4@DHRS11 ENST00000618403.4 protein_coding 36591798,36594971,36598163,36598921,36599671,36599972,36600162 36592156,36595180,36598257,36599050,36599763,36600037,36600806 Gene ID= ENSG00000278535.4 TPM= 21.73 Transcript Type= protein_coding chr17 36601572 36608971 36601572 36608971 + ENST00000614766.4@MRM1 ENST00000614766.4 protein_coding 36601572,36602553,36607670,36607899,36608243 36602352,36602646,36607802,36608018,36608971 Gene ID= ENSG00000278619.4 TPM= 9.06 Transcript Type= protein_coding chr17 36948875 37056871 36948875 37056871 + ENST00000619387.4@AATF ENST00000619387.4 protein_coding 36948875,36950214,36952886,36953770,36986617,36988519,36989247,36990774,37019005,37020934,37031614,37056601 36949216,36950405,36953296,36953907,36986731,36988720,36989411,36990857,37019072,37021014,37031685,37056871 Gene ID= ENSG00000275700.4 TPM= 76.07 Transcript Type= protein_coding chr17 37084994 37359116 37084994 37359116 - ENST00000614428.4@ACACA ENST00000614428.4 protein_coding 37358999,37339804,37330173,37284838,37283267,37277896,37277033,37275951,37274193,37270751,37263685,37259360,37258212,37257703,37252886,37252005,37248593,37248011,37246826,37245080,37244588,37243371,37241953,37240476,37234975,37226339,37224992,37223512,37221724,37210467,37207657,37206783,37205765,37200427,37200139,37193374,37192090,37191120,37188277,37181201,37179260,37161781,37155683,37151301,37149864,37130075,37129365,37125698,37122531,37121355,37113088,37111531,37097830,37096996,37088938,37084994 37359116,37339850,37330425,37284970,37283405,37278005,37277114,37276049,37274299,37270861,37263894,37259530,37258373,37257866,37253036,37252108,37248674,37248156,37246976,37245214,37244734,37243559,37242053,37240564,37235099,37226452,37225105,37223601,37221842,37210490,37207800,37206879,37205872,37200483,37200183,37193415,37192305,37191275,37188480,37181356,37179406,37162050,37155780,37151421,37149974,37130218,37129485,37125794,37122627,37121490,37113265,37111643,37097984,37097166,37089074,37087439 Gene ID= ENSG00000278540.4 TPM= 8.15 Transcript Type= protein_coding chr17 37489831 37513501 37489831 37513501 + ENST00000617516.4@DUSP14 ENST00000617516.4 protein_coding 37489831,37510677,37512181 37489958,37510764,37513501 Gene ID= ENSG00000276023.4 TPM= 36.22 Transcript Type= protein_coding chr17 37514797 37609496 37514797 37609496 - ENST00000612223.4@SYNRG ENST00000612223.4 protein_coding 37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37520179,37514797 37609496,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37520214,37519071 Gene ID= ENSG00000275066.4 TPM= 3.62 Transcript Type= protein_coding chr17 37518464 37609368 37518464 37609368 - transcript2279.chr17.nic@SYNRG transcript2279.chr17.nic protein_coding 37609279,37600363,37596223,37586419,37585325,37584648,37579132,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37518464 37609368,37600403,37596344,37586549,37585430,37584759,37579434,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37519071 Gene ID= ENSG00000275066.4 TPM= 1.81 Transcript Type= NA chr17 37518464 37609422 37518464 37609422 - transcript2281.chr17.nic@SYNRG transcript2281.chr17.nic protein_coding 37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37518464 37609422,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542427,37540543,37539245,37538420,37536127,37520648,37519071 Gene ID= ENSG00000275066.4 TPM= 5.43 Transcript Type= NA chr17 37518464 37609422 37518464 37609422 - transcript2282.chr17.nic@SYNRG transcript2282.chr17.nic protein_coding 37609279,37600363,37596223,37586419,37585325,37584648,37577380,37576341,37571791,37570637,37568791,37561471,37561195,37553115,37541972,37540380,37539192,37538324,37535979,37520538,37518464 37609422,37600403,37596344,37586549,37585430,37584759,37577613,37576418,37571987,37570885,37568924,37561589,37561257,37554059,37542565,37540543,37539245,37538420,37536127,37520648,37519071 Gene ID= ENSG00000275066.4 TPM= 1.81 Transcript Type= NA chr17 37609778 37643464 37609778 37643464 - ENST00000617633.4@DDX52 ENST00000617633.4 protein_coding 37643334,37642110,37633288,37632113,37630030,37628561,37626788,37625895,37624344,37621398,37621127,37620873,37619768,37618292,37609778 37643464,37642308,37633418,37632298,37630173,37628672,37626860,37626098,37624434,37621520,37621277,37620948,37619839,37618384,37614353 Gene ID= ENSG00000278053.4 TPM= 20.37 Transcript Type= protein_coding chr17 37613398 37643464 37613398 37643464 - transcript2289.chr17.nic@DDX52 transcript2289.chr17.nic protein_coding 37643334,37642110,37633288,37632113,37628561,37626788,37625895,37624344,37621398,37621127,37620873,37619768,37618292,37613398 37643464,37642308,37633418,37632298,37630173,37626860,37626098,37624434,37621520,37621277,37620948,37619839,37618384,37614353 Gene ID= ENSG00000278053.4 TPM= 2.26 Transcript Type= NA chr17 38181660 38257260 38181660 38257260 - transcript2305.chr17.nnic@TBC1D3 transcript2305.chr17.nnic protein_coding 38256898,38242201,38219046,38209051,38205635,38202072,38201105,38197546,38196367,38195880,38190958,38190710,38189387,38188824,38188273,38187834,38186532,38185868,38185060,38184610,38184047,38183524,38181660 38257260,38242285,38219123,38209116,38205742,38202981,38201219,38197710,38196471,38195940,38191030,38190795,38189426,38188904,38188380,38187943,38186580,38185988,38185154,38184675,38184146,38183676,38182542 Gene ID= ENSG00000274611.3 TPM= 3.17 Transcript Type= NA chr17 38195747 38257284 38195747 38257284 - transcript2307.chr17.nnic@AC244154.1 transcript2307.chr17.nnic unprocessed_pseudogene 38256898,38242201,38219046,38208995,38205635,38202781,38202238,38202072,38201105,38197546,38196367,38195747 38257284,38242285,38219123,38209116,38205742,38202981,38202334,38202105,38201219,38197710,38196471,38195940 Gene ID= ENSG00000274487.1 TPM= 12.22 Transcript Type= NA chr17 38297023 38323218 38297023 38323218 + ENST00000613675.4@MRPL45 ENST00000613675.4 protein_coding 38297023,38298449,38299351,38306533,38318687,38320618,38322126,38322509 38297249,38298626,38299468,38306631,38318735,38320767,38322299,38323218 Gene ID= ENSG00000278845.4 TPM= 54.33 Transcript Type= protein_coding chr17 38453674 38512391 38453674 38512391 + transcript2320.chr17.nic@ARHGAP23 transcript2320.chr17.nic protein_coding 38453674,38458102,38460905,38462846,38463118,38463328,38466167,38469144,38469524,38469847,38471863,38477579,38479436,38479753,38482022,38482523,38486062,38490102,38490462,38491407,38497785,38498414,38500597,38509944 38454140,38458263,38460932,38462941,38463196,38463382,38467331,38469299,38469635,38469904,38472006,38477896,38479497,38479883,38482143,38482678,38486140,38490175,38490551,38491532,38497826,38498510,38500628,38512391 Gene ID= ENSG00000275832.4 TPM= 1.81 Transcript Type= NA chr17 38428300 38512391 38428300 38512391 + transcript2321.chr17.nic@ARHGAP23 transcript2321.chr17.nic protein_coding 38428300,38458102,38460905,38462846,38463118,38463328,38466167,38469144,38469524,38469847,38471863,38477579,38479436,38479753,38482022,38482523,38486062,38490102,38490462,38491407,38497785,38500597,38509944 38428548,38458263,38460932,38462941,38463196,38463382,38467331,38469299,38469635,38469904,38472006,38477896,38479497,38479883,38482143,38482678,38486140,38490175,38490551,38491532,38497826,38500628,38512391 Gene ID= ENSG00000275832.4 TPM= 1.81 Transcript Type= NA chr17 38428418 38512392 38428418 38512392 + ENST00000622683.4@ARHGAP23 ENST00000622683.4 protein_coding 38428418,38458102,38460905,38462846,38463118,38463328,38466167,38469144,38469524,38469847,38471863,38477579,38479436,38479753,38482022,38482523,38486062,38490102,38490462,38491407,38497785,38498414,38500597,38509944 38428548,38458263,38460932,38462941,38463196,38463382,38467331,38469299,38469635,38469904,38472006,38477896,38479497,38479883,38482143,38482678,38486140,38490175,38490551,38491532,38497826,38498510,38500628,38512392 Gene ID= ENSG00000275832.4 TPM= 17.21 Transcript Type= protein_coding chr17 38681430 38706120 38681430 38706120 - transcript2330.chr17.nnic@AC006449.2 transcript2330.chr17.nnic antisense_RNA 38706054,38686794,38681430 38706120,38686901,38682122 Gene ID= ENSG00000275532.1 TPM= 1.81 Transcript Type= NA chr17 38703480 38706261 38703480 38706261 - ENST00000618407.1@AC006449.2 ENST00000618407.1 antisense_RNA 38706054,38703480 38706261,38703757 Gene ID= ENSG00000275532.1 TPM= 1.81 Transcript Type= antisense_RNA chr17 38705542 38729803 38705542 38729803 + ENST00000621332.4@MLLT6 ENST00000621332.4 protein_coding 38705542,38706950,38707486,38707763,38709173,38709482,38711847,38712691,38715612,38716367,38717432,38717845,38719517,38719750,38720372,38720659,38721878,38722678,38724620,38725557 38705741,38707029,38707540,38707872,38709276,38709575,38712014,38712789,38715828,38716981,38717613,38717953,38719583,38719895,38720569,38720747,38722227,38722768,38724976,38729803 Gene ID= ENSG00000275023.4 TPM= 34.41 Transcript Type= protein_coding chr17 38730235 38735021 38730235 38735021 + ENST00000613478.1@CISD3 ENST00000613478.1 protein_coding 38730235,38730760,38731320,38733276 38730406,38730795,38731439,38735021 Gene ID= ENSG00000277972.1 TPM= 116.21 Transcript Type= protein_coding chr17 38730359 38735044 38730359 38735044 + ENST00000619858.1@CISD3 ENST00000619858.1 protein_coding 38730359,38731320,38733276 38730795,38731439,38735044 Gene ID= ENSG00000277972.1 TPM= 17.5 Transcript Type= processed_transcript chr17 38733895 38748454 38733895 38748454 - transcript2333.chr17.nnic@PCGF2 transcript2333.chr17.nnic protein_coding 38748196,38740291,38739586,38739198,38739068,38738753,38738541,38738353,38736090,38733895 38748454,38740442,38739682,38739253,38739118,38738861,38738595,38738448,38736170,38735600 Gene ID= ENSG00000277258.4 TPM= 18.41 Transcript Type= NA chr17 38752736 38764231 38752736 38764231 + ENST00000619426.4@PSMB3 ENST00000619426.4 protein_coding 38752736,38753150,38755883,38760431,38762411,38764119 38752829,38753334,38755990,38760608,38762505,38764231 Gene ID= ENSG00000277791.4 TPM= 136.74 Transcript Type= protein_coding chr17 38752773 38764225 38752773 38764225 + ENST00000620309.4@PSMB3 ENST00000620309.4 protein_coding 38752773,38753150,38755883,38762411,38764119 38752829,38753334,38755990,38762505,38764225 Gene ID= ENSG00000277791.4 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr17 38765689 38799905 38765689 38799905 - ENST00000619039.4@PIP4K2B ENST00000619039.4 protein_coding 38799266,38786823,38784243,38780452,38779383,38778334,38777687,38771014,38770436,38765689 38799905,38786920,38784339,38780604,38779529,38778372,38777800,38771272,38770539,38769771 Gene ID= ENSG00000276293.4 TPM= 46.18 Transcript Type= protein_coding chr17 38800444 38825354 38800444 38825354 - transcript2350.chr17.nic@CWC25 transcript2350.chr17.nic protein_coding 38825166,38820901,38814861,38812795,38810276,38809702,38806765,38806297,38802700,38800444 38825354,38821073,38815097,38812864,38810595,38809765,38806976,38806395,38802861,38802206 Gene ID= ENSG00000273559.4 TPM= 8.6 Transcript Type= NA chr17 38800434 38825481 38800434 38825481 - ENST00000614790.4@CWC25 ENST00000614790.4 protein_coding 38825166,38820901,38814861,38812795,38810468,38809702,38806765,38806297,38802700,38800434 38825481,38821073,38815097,38812864,38810595,38809765,38806976,38806395,38802861,38802206 Gene ID= ENSG00000273559.4 TPM= 13.13 Transcript Type= protein_coding chr17 38847867 38853843 38847867 38853843 - ENST00000479035.6@RPL23 ENST00000479035.6 protein_coding 38853698,38853022,38852604,38850362,38847867 38853843,38853105,38852732,38850475,38850214 Gene ID= ENSG00000125691.12 TPM= 172.96 Transcript Type= protein_coding chr17 38850081 38853428 38850081 38853428 - ENST00000245857.9@RPL23 ENST00000245857.9 protein_coding 38853302,38853022,38852604,38850362,38850081 38853428,38853105,38852732,38850475,38850214 Gene ID= ENSG00000125691.12 TPM= 34.41 Transcript Type= protein_coding chr17 38869516 38921768 38869516 38921768 + transcript2360.chr17.nnic@LASP1 transcript2360.chr17.nnic protein_coding 38869516,38878086,38890420,38898412,38914325,38915043,38918605,38920306 38870258,38878180,38890504,38898519,38914475,38915146,38919982,38921768 Gene ID= ENSG00000002834.17 TPM= 5.89 Transcript Type= NA chr17 38869963 38921769 38869963 38921769 + transcript2361.chr17.nnic@LASP1 transcript2361.chr17.nnic protein_coding 38869963,38878086,38890420,38898412,38914325,38915043,38918605,38921214 38870258,38878180,38890504,38898519,38914475,38915146,38921106,38921769 Gene ID= ENSG00000002834.17 TPM= 15.39 Transcript Type= NA chr17 38869859 38921770 38869859 38921770 + ENST00000318008.10@LASP1 ENST00000318008.10 protein_coding 38869859,38878086,38890420,38898412,38914325,38915043,38918605 38870258,38878180,38890504,38898519,38914475,38915146,38921770 Gene ID= ENSG00000002834.17 TPM= 168.88 Transcript Type= protein_coding chr17 39173803 39197638 39173803 39197638 - transcript2372.chr17.nnic@CACNB1 transcript2372.chr17.nnic protein_coding 39197412,39194884,39191474,39187479,39186793,39186496,39184784,39184325,39184031,39183713,39177350,39173803 39197638,39194970,39191593,39187601,39186929,39186572,39184864,39184383,39184140,39183864,39177535,39175657 Gene ID= ENSG00000067191.15 TPM= 1.81 Transcript Type= NA chr17 39200283 39204727 39200283 39204727 + ENST00000225430.8@RPL19 ENST00000225430.8 protein_coding 39200283,39201213,39202317,39202989,39204077,39204525 39200349,39201319,39202439,39203109,39204187,39204727 Gene ID= ENSG00000108298.9 TPM= 872.79 Transcript Type= protein_coding chr17 39200316 39204727 39200316 39204727 + ENST00000579374.5@RPL19 ENST00000579374.5 protein_coding 39200316,39201222,39202317,39202989,39204077,39204525 39200349,39201319,39202439,39203109,39204187,39204727 Gene ID= ENSG00000108298.9 TPM= 89.5 Transcript Type= protein_coding chr17 39200342 39204711 39200342 39204711 + ENST00000579260.5@RPL19 ENST00000579260.5 protein_coding 39200342,39201213,39202317,39202989,39204077,39204525 39200743,39201319,39202439,39203109,39204187,39204711 Gene ID= ENSG00000108298.9 TPM= 12.07 Transcript Type= protein_coding chr17 39252644 39401663 39252644 39401663 - ENST00000264658.10@FBXL20 ENST00000264658.10 protein_coding 39401361,39343180,39303585,39301001,39298990,39297127,39285478,39282729,39281389,39274970,39270796,39268827,39265397,39264175,39252644 39401663,39343241,39303639,39301075,39299084,39297195,39285573,39282855,39281463,39275100,39270856,39268871,39265453,39264387,39261567 Gene ID= ENSG00000108306.11 TPM= 31.24 Transcript Type= protein_coding chr17 39260587 39401623 39260587 39401623 - ENST00000394294.7@FBXL20 ENST00000394294.7 protein_coding 39401361,39343180,39303585,39301001,39298990,39297127,39282729,39281389,39274970,39270796,39268827,39265397,39264175,39260587 39401623,39343241,39303639,39301075,39299084,39297195,39282855,39281463,39275100,39270856,39268871,39265453,39264387,39261567 Gene ID= ENSG00000108306.11 TPM= 1.36 Transcript Type= protein_coding chr17 39637124 39664201 39637124 39664201 + transcript2390.chr17.nic@STARD3 transcript2390.chr17.nic protein_coding 39637124,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804 39637231,39653750,39657085,39657839,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39664201 Gene ID= ENSG00000131748.15 TPM= 4.85 Transcript Type= NA chr17 39637065 39663484 39637065 39663484 + ENST00000336308.9@STARD3 ENST00000336308.9 protein_coding 39637065,39653481,39657008,39657775,39657973,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804 39637231,39653750,39657085,39657852,39658026,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663484 Gene ID= ENSG00000131748.15 TPM= 110.8 Transcript Type= protein_coding chr17 39637063 39663469 39637063 39663469 + transcript2400.chr17.nic@STARD3 transcript2400.chr17.nic protein_coding 39637063,39653481,39657008,39657775,39657973,39658405,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804 39637231,39653750,39657085,39657852,39658026,39658522,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663469 Gene ID= ENSG00000131748.15 TPM= 14.59 Transcript Type= NA chr17 39637063 39664201 39637063 39664201 + transcript2405.chr17.nic@STARD3 transcript2405.chr17.nic protein_coding 39637063,39653481,39657008,39657775,39657973,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804 39637231,39653750,39657085,39657852,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39664201 Gene ID= ENSG00000131748.15 TPM= 11.65 Transcript Type= NA chr17 39637144 39663434 39637144 39663434 + ENST00000394250.8@STARD3 ENST00000394250.8 protein_coding 39637144,39653481,39657008,39657775,39658405,39658722,39659051,39659461,39660211,39660431,39660810,39660981,39662251,39662804 39637231,39653750,39657085,39657852,39658522,39658820,39659106,39659553,39660273,39660526,39660889,39661085,39662344,39663434 Gene ID= ENSG00000131748.15 TPM= 1.81 Transcript Type= protein_coding chr17 39671122 39688107 39671122 39688107 - ENST00000300658.8@PGAP3 ENST00000300658.8 protein_coding 39687834,39685922,39684597,39674617,39673993,39673514,39673051,39671122 39688107,39686019,39684749,39674679,39674054,39673650,39673255,39672866 Gene ID= ENSG00000161395.13 TPM= 31.99 Transcript Type= protein_coding chr17 39671123 39688057 39671123 39688057 - ENST00000378011.8@PGAP3 ENST00000378011.8 protein_coding 39687834,39685922,39674617,39673993,39673514,39673051,39671123 39688057,39686019,39674679,39674054,39673650,39673255,39672866 Gene ID= ENSG00000161395.13 TPM= 4.83 Transcript Type= protein_coding chr17 39671123 39688057 39671123 39688057 - ENST00000309862.10@PGAP3 ENST00000309862.10 protein_coding 39687834,39685922,39684597,39674617,39673514,39673051,39671123 39688057,39686019,39684749,39674679,39674054,39673255,39672866 Gene ID= ENSG00000161395.13 TPM= 3.02 Transcript Type= retained_intron chr17 39688101 39728661 39688101 39728661 + transcript2417.chr17.nic@ERBB2 transcript2417.chr17.nic protein_coding 39688101,39688696,39693261,39694988,39706990,39708321,39709318,39709813,39710086,39710340,39711928,39712322,39715286,39715446,39715740,39716301,39716515,39717320,39719787,39723319,39723538,39723912,39724726,39725049,39725327,39725707,39726562,39726815,39727295,39727689 39688278,39688800,39693325,39695181,39707141,39708534,39709452,39709881,39710201,39710481,39712047,39712448,39715359,39715536,39715939,39716433,39716605,39717480,39719834,39723457,39723660,39724010,39724911,39725204,39725402,39725853,39726659,39727003,39727547,39728661 Gene ID= ENSG00000141736.13 TPM= 5.43 Transcript Type= NA chr17 39729156 39730787 39729156 39730787 - ENST00000394231.7@MIEN1 ENST00000394231.7 protein_coding 39730407,39730194,39729685,39729156 39730787,39730291,39729761,39729605 Gene ID= ENSG00000141741.11 TPM= 42.56 Transcript Type= protein_coding chr17 39921041 39927601 39921041 39927601 - ENST00000304046.6@ORMDL3 ENST00000304046.6 protein_coding 39927484,39924030,39923112,39921041 39927601,39924225,39923263,39922685 Gene ID= ENSG00000172057.9 TPM= 8.6 Transcript Type= protein_coding chr17 39921041 39927601 39921041 39927601 - ENST00000579695.5@ORMDL3 ENST00000579695.5 protein_coding 39927484,39924030,39923112,39921041 39927601,39924220,39923263,39922685 Gene ID= ENSG00000172057.9 TPM= 2.26 Transcript Type= protein_coding chr17 39980797 39997960 39980797 39997960 + ENST00000264639.8@PSMD3 ENST00000264639.8 protein_coding 39980797,39984294,39986575,39988683,39989739,39990094,39994954,39995176,39995424,39996183,39997330,39997504 39981190,39984484,39986712,39988819,39989929,39990197,39995068,39995295,39995527,39996338,39997380,39997960 Gene ID= ENSG00000108344.14 TPM= 187.9 Transcript Type= protein_coding chr17 40019097 40054657 40019097 40054657 - transcript2439.chr17.nic@MED24 transcript2439.chr17.nic protein_coding 40054361,40053469,40053298,40036116,40035722,40035117,40034916,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019097 40054657,40053635,40053380,40036154,40035795,40035349,40034972,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645 Gene ID= ENSG00000008838.19 TPM= 4.37 Transcript Type= NA chr17 40019097 40054432 40019097 40054432 - transcript2444.chr17.nic@MED24 transcript2444.chr17.nic protein_coding 40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019097 40054432,40053657,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645 Gene ID= ENSG00000008838.19 TPM= 28.22 Transcript Type= NA chr17 40019097 40054408 40019097 40054408 - transcript2446.chr17.nic@MED24 transcript2446.chr17.nic protein_coding 40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019097 40054408,40053768,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645 Gene ID= ENSG00000008838.19 TPM= 9.2 Transcript Type= NA chr17 40019097 40054432 40019097 40054432 - transcript2449.chr17.nnic@MED24 transcript2449.chr17.nnic protein_coding 40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019097 40054432,40053657,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40028011,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645 Gene ID= ENSG00000008838.19 TPM= 4.19 Transcript Type= NA chr17 40019102 40054405 40019102 40054405 - ENST00000394128.6@MED24 ENST00000394128.6 protein_coding 40054361,40053469,40053298,40036116,40035722,40035117,40033345,40033056,40032649,40032043,40031538,40031159,40029748,40028826,40027909,40027383,40026856,40026647,40026156,40023131,40022645,40022394,40021955,40020273,40019785,40019102 40054405,40053635,40053380,40036154,40035795,40035349,40033456,40033206,40032762,40032090,40031620,40031245,40029859,40028968,40027946,40027465,40027034,40026746,40026331,40023395,40022826,40022484,40022054,40020353,40019933,40019645 Gene ID= ENSG00000008838.19 TPM= 56.29 Transcript Type= protein_coding chr17 40062810 40093867 40062810 40093867 + ENST00000584985.5@THRA ENST00000584985.5 protein_coding 40062810,40074192,40076871,40077508,40083835,40084610,40086707,40088242,40089206,40093137 40063092,40074541,40076938,40077608,40083982,40084815,40086853,40088500,40089333,40093867 Gene ID= ENSG00000126351.12 TPM= 7.24 Transcript Type= protein_coding chr17 40092787 40100725 40092787 40100725 - ENST00000246672.3@NR1D1 ENST00000246672.3 protein_coding 40100064,40097065,40096691,40096443,40095444,40094935,40093912,40092787 40100725,40097403,40096779,40096587,40096087,40095120,40094122,40093282 Gene ID= ENSG00000126368.5 TPM= 88.74 Transcript Type= protein_coding chr17 40122298 40136916 40122298 40136916 + ENST00000398532.8@MSL1 ENST00000398532.8 protein_coding 40122298,40126183,40129245,40131537,40132034,40133042,40133534,40133827,40134279 40123380,40126406,40129627,40131584,40132098,40133109,40133658,40133899,40136916 Gene ID= ENSG00000188895.11 TPM= 7.24 Transcript Type= protein_coding chr17 40140323 40172183 40140323 40172183 + ENST00000264645.11@CASC3 ENST00000264645.11 protein_coding 40140323,40141207,40141570,40161753,40162002,40162725,40163481,40166797,40167498,40167850,40168203,40169324,40169598,40170447 40140779,40141234,40141607,40161911,40162153,40162901,40164166,40166861,40167612,40167948,40168417,40169446,40169662,40172183 Gene ID= ENSG00000108349.16 TPM= 86.03 Transcript Type= protein_coding chr17 40287633 40304657 40287633 40304657 + ENST00000209728.8@CDC6 ENST00000209728.8 protein_coding 40287633,40289408,40291058,40291469,40293456,40293950,40294364,40295356,40296703,40300828,40301468,40301912 40288090,40289598,40291339,40291668,40293631,40294056,40294503,40295456,40296767,40301030,40301608,40304657 Gene ID= ENSG00000094804.9 TPM= 2.72 Transcript Type= protein_coding chr17 40342147 40357643 40342147 40357643 + transcript2488.chr17.nnic@RARA transcript2488.chr17.nnic protein_coding 40342147,40348316,40349801,40351910,40352331,40354302,40355263,40356009 40342867,40348464,40349925,40352070,40352507,40354506,40355421,40357643 Gene ID= ENSG00000131759.17 TPM= 3.47 Transcript Type= NA chr17 40309194 40356796 40309194 40356796 + ENST00000254066.9@RARA ENST00000254066.9 protein_coding 40309194,40330857,40348316,40349784,40351910,40352331,40354302,40355263,40356009 40309286,40331396,40348464,40349925,40352070,40352507,40354506,40355421,40356796 Gene ID= ENSG00000131759.17 TPM= 7.09 Transcript Type= protein_coding chr17 40342363 40356795 40342363 40356795 + ENST00000394081.7@RARA ENST00000394081.7 protein_coding 40342363,40348316,40349784,40351910,40352331,40354302,40355263,40356009 40342867,40348464,40349925,40352070,40352507,40354506,40355421,40356795 Gene ID= ENSG00000131759.17 TPM= 13.88 Transcript Type= protein_coding chr17 40340867 40343136 40340867 40343136 - ENST00000581080.1@RARA-AS1 ENST00000581080.1 antisense_RNA 40342876,40341996,40340867 40343136,40342690,40341700 Gene ID= ENSG00000265666.1 TPM= 7.24 Transcript Type= antisense_RNA chr17 40388516 40417950 40388516 40417950 - ENST00000423485.5@TOP2A ENST00000423485.5 protein_coding 40417771,40416740,40416422,40416005,40413480,40413195,40412759,40411645,40411354,40411109,40408492,40407967,40407549,40406832,40406584,40406384,40404791,40404377,40404152,40402906,40400850,40400529,40400209,40399872,40399040,40398773,40398558,40396283,40395449,40392585,40392218,40392068,40391506,40389965,40388516 40417950,40416895,40416512,40416068,40413625,40413292,40412971,40411818,40411455,40411246,40408630,40408124,40407674,40406942,40406689,40406493,40404883,40404491,40404273,40403054,40401081,40400663,40400409,40400067,40399131,40398937,40398641,40396465,40395539,40392737,40392341,40392111,40391640,40390164,40389647 Gene ID= ENSG00000131747.14 TPM= 1.81 Transcript Type= protein_coding chr17 40443461 40457731 40443461 40457731 + ENST00000269593.4@IGFBP4 ENST00000269593.4 protein_coding 40443461,40452985,40453928,40456449 40444084,40453142,40454062,40457731 Gene ID= ENSG00000141753.6 TPM= 698.18 Transcript Type= protein_coding chr17 40553769 40565472 40553769 40565472 - ENST00000246657.2@CCR7 ENST00000246657.2 protein_coding 40565400,40558893,40553769 40565472,40558942,40555818 Gene ID= ENSG00000126353.3 TPM= 4.53 Transcript Type= protein_coding chr17 40817817 40819128 40817817 40819128 - transcript2506.chr17.nnic@KRT10 transcript2506.chr17.nnic protein_coding 40819112,40818787,40817817 40819128,40819069,40818482 Gene ID= ENSG00000186395.7 TPM= 75.16 Transcript Type= NA chr17 40819125 40836270 40819125 40836270 + ENST00000301665.7@TMEM99 ENST00000301665.7 protein_coding 40819125,40833115,40834382 40819208,40833199,40836270 Gene ID= ENSG00000167920.8 TPM= 9.96 Transcript Type= protein_coding chr17 41688893 41692668 41688893 41692668 + ENST00000469257.1@EIF1 ENST00000469257.1 protein_coding 41688893,41689778,41690088,41690782 41689069,41689941,41690189,41692668 Gene ID= ENSG00000173812.10 TPM= 657.43 Transcript Type= protein_coding chr17 41688885 41691646 41688885 41691646 + ENST00000462917.1@EIF1 ENST00000462917.1 protein_coding 41688885,41690782 41690189,41691646 Gene ID= ENSG00000173812.10 TPM= 11.77 Transcript Type= retained_intron chr17 41688901 41691630 41688901 41691630 + ENST00000310837.8@EIF1 ENST00000310837.8 protein_coding 41688901,41690088,41690782 41689069,41690189,41691630 Gene ID= ENSG00000173812.10 TPM= 19.02 Transcript Type= processed_transcript chr17 41754604 41786698 41754604 41786698 - ENST00000310706.9@JUP ENST00000310706.9 protein_coding 41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41755730,41754604 41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895,41755432 Gene ID= ENSG00000173801.16 TPM= 30.79 Transcript Type= protein_coding chr17 41754604 41786698 41754604 41786698 - ENST00000393931.7@JUP ENST00000393931.7 protein_coding 41786588,41771647,41769418,41768969,41767379,41764923,41764713,41762983,41758715,41758399,41757634,41757415,41756175,41754604 41786698,41771862,41769677,41769207,41767580,41765067,41764816,41763321,41758870,41758518,41757784,41757536,41756214,41755895 Gene ID= ENSG00000173801.16 TPM= 20.83 Transcript Type= protein_coding chr17 41801946 41812200 41801946 41812200 - transcript2535.chr17.nic@P3H4 transcript2535.chr17.nic protein_coding 41811132,41810863,41809706,41807859,41806796,41803287,41801946 41812200,41811034,41809834,41808004,41806879,41803431,41802979 Gene ID= ENSG00000141696.12 TPM= 7.77 Transcript Type= NA chr17 41801947 41812603 41801947 41812603 - ENST00000355468.7@P3H4 ENST00000355468.7 protein_coding 41812364,41811454,41811132,41810863,41809706,41807859,41806796,41803287,41801947 41812603,41812142,41811284,41811034,41809834,41808004,41806879,41803431,41802979 Gene ID= ENSG00000141696.12 TPM= 91.08 Transcript Type= protein_coding chr17 41812748 41823212 41812748 41823212 + transcript2534.chr17.nic@FKBP10 transcript2534.chr17.nic protein_coding 41812748,41817058,41818089,41818382,41819210,41819530,41821654,41822223 41813279,41817203,41818278,41818527,41819399,41821089,41821817,41823212 Gene ID= ENSG00000141756.18 TPM= 3.62 Transcript Type= NA chr17 41812931 41823217 41812931 41823217 + ENST00000321562.8@FKBP10 ENST00000321562.8 protein_coding 41812931,41817058,41818089,41818382,41819210,41819530,41820269,41820947,41821654,41822223 41813279,41817203,41818278,41818527,41819399,41819675,41820461,41821089,41821817,41823217 Gene ID= ENSG00000141756.18 TPM= 6.34 Transcript Type= protein_coding chr17 41825189 41836267 41825189 41836267 - transcript2544.chr17.nic@NT5C3B transcript2544.chr17.nic protein_coding 41836182,41835859,41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825189 41836267,41835957,41835682,41835272,41835116,41832477,41830890,41828952,41827626,41825657 Gene ID= ENSG00000141698.16 TPM= 3.26 Transcript Type= NA chr17 41825189 41836235 41825189 41836235 - transcript2545.chr17.nic@NT5C3B transcript2545.chr17.nic protein_coding 41835859,41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825189 41836235,41835642,41835272,41835116,41832477,41830890,41828952,41827626,41825657 Gene ID= ENSG00000141698.16 TPM= 2.35 Transcript Type= NA chr17 41825189 41836271 41825189 41836271 - transcript2548.chr17.nic@NT5C3B transcript2548.chr17.nic protein_coding 41836079,41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825189 41836271,41835957,41835272,41835116,41832477,41830890,41828952,41827626,41825657 Gene ID= ENSG00000141698.16 TPM= 11.41 Transcript Type= NA chr17 41825181 41836258 41825181 41836258 - ENST00000523903.5@NT5C3B ENST00000523903.5 protein_coding 41835859,41835203,41835070,41832392,41830801,41828790,41827426,41825181 41836258,41835272,41835116,41832477,41830890,41828952,41827626,41825657 Gene ID= ENSG00000141698.16 TPM= 25.9 Transcript Type= retained_intron chr17 41825181 41836202 41825181 41836202 - ENST00000469698.5@NT5C3B ENST00000469698.5 protein_coding 41835859,41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825181 41836202,41835682,41835272,41835116,41832477,41830890,41828952,41827626,41825657 Gene ID= ENSG00000141698.16 TPM= 4.17 Transcript Type= retained_intron chr17 41825227 41836228 41825227 41836228 - ENST00000470690.5@NT5C3B ENST00000470690.5 protein_coding 41835588,41835203,41835070,41832392,41830801,41828790,41827426,41825227 41836228,41835272,41835116,41832477,41830890,41828952,41827626,41825657 Gene ID= ENSG00000141698.16 TPM= 3.62 Transcript Type= retained_intron chr17 41866931 41919019 41866931 41919019 - ENST00000353196.5@ACLY ENST00000353196.5 protein_coding 41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866931 41919019,41913896,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904 Gene ID= ENSG00000131473.16 TPM= 26.49 Transcript Type= protein_coding chr17 41866908 41918987 41866908 41918987 - ENST00000352035.6@ACLY ENST00000352035.6 protein_coding 41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866908 41918987,41913896,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904 Gene ID= ENSG00000131473.16 TPM= 42.04 Transcript Type= protein_coding chr17 41866917 41918962 41866917 41918962 - ENST00000590151.5@ACLY ENST00000590151.5 protein_coding 41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41896620,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41866917 41918962,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41896649,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904 Gene ID= ENSG00000131473.16 TPM= 8.53 Transcript Type= protein_coding chr17 41867574 41919022 41867574 41919022 - ENST00000393896.6@ACLY ENST00000393896.6 protein_coding 41918880,41913715,41912420,41910222,41909510,41908989,41907442,41906528,41905522,41904729,41901696,41898631,41897749,41893033,41892279,41887599,41886112,41884193,41883122,41878797,41878103,41873811,41872032,41871689,41869474,41869043,41868709,41867574 41919022,41913900,41912542,41910284,41909700,41909068,41907572,41906646,41905658,41904790,41901813,41898785,41897839,41893174,41892447,41887703,41886308,41884274,41883232,41878924,41878196,41873965,41872182,41871832,41869587,41869125,41868785,41867904 Gene ID= ENSG00000131473.16 TPM= 3.17 Transcript Type= protein_coding chr17 41966798 41975173 41966798 41975173 + transcript2573.chr17.nnic@CNP transcript2573.chr17.nnic protein_coding 41966798,41968068,41971892,41973126,41973475 41966887,41968740,41972031,41973304,41975173 Gene ID= ENSG00000173786.16 TPM= 15.39 Transcript Type= NA chr17 41966741 41977731 41966741 41977731 + ENST00000393892.7@CNP ENST00000393892.7 protein_coding 41966741,41968068,41971892,41973475 41966887,41968740,41972031,41977731 Gene ID= ENSG00000173786.16 TPM= 193.79 Transcript Type= protein_coding chr17 41976433 42017461 41976433 42017461 - transcript2565.chr17.nic@DNAJC7 transcript2565.chr17.nic protein_coding 42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41987595,41983563,41982255,41981855,41977261,41976433 42017461,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41987694,41983636,41982401,41982007,41977323,41976770 Gene ID= ENSG00000168259.14 TPM= 3.17 Transcript Type= NA chr17 41976433 42017653 41976433 42017653 - ENST00000457167.8@DNAJC7 ENST00000457167.8 protein_coding 42017340,42000482,41997115,41996311,41994870,41990264,41989404,41988732,41987819,41983563,41982255,41981855,41977261,41976433 42017653,42000570,41997239,41996424,41994944,41990382,41989557,41988896,41987910,41983636,41982401,41982007,41977323,41976770 Gene ID= ENSG00000168259.14 TPM= 24 Transcript Type= protein_coding chr17 42101404 42112733 42101404 42112733 - ENST00000251642.7@DHX58 ENST00000251642.7 protein_coding 42112605,42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42103608,42102216,42101404 42112733,42112205,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42103798,42102312,42101946 Gene ID= ENSG00000108771.12 TPM= 25.81 Transcript Type= protein_coding chr17 42101407 42112734 42101407 42112734 - transcript2593.chr17.nnic@DHX58 transcript2593.chr17.nnic protein_coding 42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42103608,42102216,42101407 42112734,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42103798,42102291,42101946 Gene ID= ENSG00000108771.12 TPM= 1.81 Transcript Type= NA chr17 42101407 42112734 42101407 42112734 - transcript2596.chr17.nic@DHX58 transcript2596.chr17.nic protein_coding 42112113,42111725,42111296,42110723,42109270,42107982,42107604,42105736,42105018,42104766,42102216,42101407 42112734,42111893,42111497,42110913,42109386,42108108,42107795,42105989,42105167,42104927,42102312,42101946 Gene ID= ENSG00000108771.12 TPM= 4.53 Transcript Type= NA chr17 42113118 42121058 42113118 42121058 - ENST00000465682.5@KAT2A ENST00000465682.5 protein_coding 42120966,42120706,42120225,42120030,42119537,42119054,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113118 42121058,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842 Gene ID= ENSG00000108773.10 TPM= 46.64 Transcript Type= nonsense_mediated_decay chr17 42113108 42121358 42113108 42121358 - ENST00000225916.9@KAT2A ENST00000225916.9 protein_coding 42120966,42120706,42120225,42120030,42119537,42119245,42118297,42117907,42117678,42117388,42117035,42115723,42114892,42114490,42114358,42114219,42114000,42113108 42121358,42120829,42120370,42120119,42119718,42119436,42118403,42118017,42117814,42117596,42117161,42115833,42115035,42114604,42114394,42114282,42114084,42113842 Gene ID= ENSG00000108773.10 TPM= 29.43 Transcript Type= protein_coding chr17 42124976 42155005 42124976 42155005 - transcript2617.chr17.nic@RAB5C transcript2617.chr17.nic protein_coding 42154893,42137762,42130337,42128649,42128261,42126755,42124976 42155005,42137878,42130590,42128800,42128383,42126848,42125898 Gene ID= ENSG00000108774.14 TPM= 31.99 Transcript Type= NA chr17 42124976 42155017 42124976 42155017 - ENST00000346213.8@RAB5C ENST00000346213.8 protein_coding 42154893,42130337,42128649,42128261,42126755,42124976 42155017,42130590,42128800,42128383,42126848,42125898 Gene ID= ENSG00000108774.14 TPM= 281.92 Transcript Type= protein_coding chr17 42189088 42194494 42189088 42194494 - ENST00000414034.7@GHDC ENST00000414034.7 protein_coding 42194393,42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189088 42194494,42193850,42193594,42193027,42192742,42191210,42190903,42190757,42190359,42189921 Gene ID= ENSG00000167925.15 TPM= 5.73 Transcript Type= protein_coding chr17 42189089 42194484 42189089 42194484 - ENST00000587427.5@GHDC ENST00000587427.5 protein_coding 42194393,42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189089 42194484,42193850,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921 Gene ID= ENSG00000167925.15 TPM= 40.6 Transcript Type= protein_coding chr17 42189088 42194195 42189088 42194195 - ENST00000301671.12@GHDC ENST00000301671.12 protein_coding 42193767,42193317,42192906,42192241,42191018,42190832,42190624,42190185,42189088 42194195,42193594,42193027,42192742,42191210,42190903,42190757,42190270,42189921 Gene ID= ENSG00000167925.15 TPM= 26.11 Transcript Type= protein_coding chr17 42199169 42276423 42199169 42276423 - transcript2642.chr17.nnic@STAT5B transcript2642.chr17.nnic protein_coding 42276248,42232000,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199169 42276423,42232137,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864 Gene ID= ENSG00000173757.9 TPM= 6.34 Transcript Type= NA chr17 42199169 42276433 42199169 42276433 - transcript2643.chr17.nic@STAT5B transcript2643.chr17.nic protein_coding 42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199169 42276433,42232137,42227685,42224868,42223556,42219842,42219463,42218878,42218330,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864 Gene ID= ENSG00000173757.9 TPM= 4.53 Transcript Type= NA chr17 42199168 42276406 42199168 42276406 - ENST00000293328.7@STAT5B ENST00000293328.7 protein_coding 42276248,42232000,42227529,42224779,42223382,42219712,42219312,42218723,42218151,42217377,42217160,42216014,42211984,42210403,42210171,42207558,42202757,42202340,42199168 42276406,42232137,42227685,42224868,42223556,42219842,42219463,42218878,42218330,42217464,42217282,42216106,42212190,42210497,42210301,42207728,42202808,42202447,42201864 Gene ID= ENSG00000173757.9 TPM= 143.08 Transcript Type= protein_coding chr17 42287684 42311948 42287684 42311948 + transcript2633.chr17.nnic@STAT5A transcript2633.chr17.nnic protein_coding 42287684,42288056,42289402,42289866,42291972,42295619,42299751,42300130,42300715,42301275,42304342,42304530,42305610,42306241,42307402,42307593,42308178,42309047,42309377,42310507 42287708,42288598,42289539,42290022,42292061,42295793,42299881,42300281,42300870,42301454,42304429,42304652,42305702,42306447,42307496,42307723,42308333,42309098,42309484,42311948 Gene ID= ENSG00000126561.16 TPM= 192.88 Transcript Type= NA chr17 42313312 42388570 42313312 42388570 - transcript2657.chr17.nic@STAT3 transcript2657.chr17.nic protein_coding 42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42313312 42388570,42348539,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316851,42315800 Gene ID= ENSG00000168610.14 TPM= 23.54 Transcript Type= NA chr17 42313312 42388517 42313312 42388517 - transcript2662.chr17.nic@STAT3 transcript2662.chr17.nic protein_coding 42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42313312 42388517,42348520,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800 Gene ID= ENSG00000168610.14 TPM= 41.2 Transcript Type= NA chr17 42313324 42388568 42313324 42388568 - ENST00000264657.9@STAT3 ENST00000264657.9 protein_coding 42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42313324 42388568,42348539,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316901,42315800 Gene ID= ENSG00000168610.14 TPM= 222.31 Transcript Type= protein_coding chr17 42314854 42388439 42314854 42388439 - ENST00000585517.5@STAT3 ENST00000585517.5 protein_coding 42388279,42348389,42346569,42345559,42339314,42338731,42337763,42337435,42333891,42333673,42331472,42329747,42329554,42329410,42326116,42324963,42324711,42323573,42323260,42323004,42322282,42317182,42316789,42314854 42388439,42348520,42346713,42345657,42339409,42338812,42337857,42337586,42334049,42333765,42331531,42329776,42329647,42329457,42326199,42325061,42324846,42323625,42323354,42323143,42322494,42317224,42316851,42315800 Gene ID= ENSG00000168610.14 TPM= 15.39 Transcript Type= protein_coding chr17 42402449 42423313 42402449 42423313 - transcript2669.chr17.nnic@CAVIN1 transcript2669.chr17.nnic protein_coding 42422627,42404536,42402449 42423313,42405388,42404373 Gene ID= ENSG00000177469.12 TPM= 66.56 Transcript Type= NA chr17 42402452 42423517 42402452 42423517 - ENST00000357037.5@CAVIN1 ENST00000357037.5 protein_coding 42422627,42402452 42423517,42405388 Gene ID= ENSG00000177469.12 TPM= 585.43 Transcript Type= protein_coding chr17 42458847 42522580 42458847 42522580 + transcript2680.chr17.nic@ATP6V0A1 transcript2680.chr17.nic protein_coding 42458847,42460848,42466429,42468010,42470090,42477660,42478463,42478927,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42521027 42458963,42461011,42466507,42468107,42470218,42477742,42478589,42479049,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42522580 Gene ID= ENSG00000033627.16 TPM= 6.34 Transcript Type= NA chr17 42458904 42522578 42458904 42522578 + transcript2685.chr17.nic@ATP6V0A1 transcript2685.chr17.nic protein_coding 42458904,42460848,42466429,42468010,42470090,42477639,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42521027 42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42522578 Gene ID= ENSG00000033627.16 TPM= 4.53 Transcript Type= NA chr17 42458880 42522582 42458880 42522582 + ENST00000264649.10@ATP6V0A1 ENST00000264649.10 protein_coding 42458880,42460848,42466429,42468010,42470090,42477639,42478463,42480667,42483038,42487155,42490487,42494334,42495034,42495626,42498924,42500707,42501197,42507520,42513861,42514289,42521027 42458963,42461011,42466507,42468107,42470218,42477742,42478589,42480749,42483131,42487367,42490637,42494473,42495188,42495716,42499042,42500923,42501304,42507627,42513978,42514460,42522582 Gene ID= ENSG00000033627.16 TPM= 36.22 Transcript Type= protein_coding chr17 42536172 42544449 42536172 42544449 + ENST00000225927.6@NAGLU ENST00000225927.6 protein_coding 42536172,42537398,42538339,42538670,42540950,42543028 42536655,42537545,42538485,42538755,42541206,42544449 Gene ID= ENSG00000108784.9 TPM= 183.93 Transcript Type= protein_coding chr17 42536216 42544447 42536216 42544447 + transcript2698.chr17.nic@NAGLU transcript2698.chr17.nic protein_coding 42536216,42537398,42538339,42538670,42543028 42536655,42537545,42538485,42538755,42544447 Gene ID= ENSG00000108784.9 TPM= 13.76 Transcript Type= NA chr17 42536231 42544447 42536231 42544447 + transcript2699.chr17.nic@NAGLU transcript2699.chr17.nic protein_coding 42536231,42538339,42538670,42540950,42543028 42537545,42538485,42538755,42541206,42544447 Gene ID= ENSG00000108784.9 TPM= 14.6 Transcript Type= NA chr17 42536231 42544447 42536231 42544447 + transcript2700.chr17.nnic@NAGLU transcript2700.chr17.nnic protein_coding 42536231,42538339,42538670,42541039,42543028 42537545,42538485,42538755,42541206,42544447 Gene ID= ENSG00000108784.9 TPM= 10.14 Transcript Type= NA chr17 42536237 42544447 42536237 42544447 + transcript2701.chr17.nic@NAGLU transcript2701.chr17.nic protein_coding 42536237,42538339,42538670,42540950,42543028 42536655,42538485,42538755,42541206,42544447 Gene ID= ENSG00000108784.9 TPM= 17.61 Transcript Type= NA chr17 42562127 42566281 42562127 42566281 + transcript2717.chr17.nic@COASY transcript2717.chr17.nic protein_coding 42562127,42563961,42564709,42564983,42565227,42565471,42565659,42565906 42563322,42564577,42564898,42565047,42565311,42565568,42565805,42566281 Gene ID= ENSG00000068120.14 TPM= 7.47 Transcript Type= NA chr17 42562147 42566260 42562147 42566260 + ENST00000421097.6@COASY ENST00000421097.6 protein_coding 42562147,42562612,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906 42562219,42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566260 Gene ID= ENSG00000068120.14 TPM= 104.14 Transcript Type= protein_coding chr17 42562167 42566275 42562167 42566275 + ENST00000393818.2@COASY ENST00000393818.2 protein_coding 42562167,42563961,42564446,42564709,42564983,42565227,42565471,42565659,42565906 42563322,42564175,42564577,42564898,42565047,42565311,42565568,42565805,42566275 Gene ID= ENSG00000068120.14 TPM= 130.33 Transcript Type= protein_coding chr17 42567072 42573239 42567072 42573239 + ENST00000246912.8@MLX ENST00000246912.8 protein_coding 42567072,42567619,42568470,42568837,42569204,42569507,42569982,42571547 42567328,42567655,42568559,42568943,42569303,42569606,42570183,42573239 Gene ID= ENSG00000108788.11 TPM= 10.26 Transcript Type= protein_coding chr17 42567103 42572712 42567103 42572712 + transcript2728.chr17.nic@MLX transcript2728.chr17.nic protein_coding 42567103,42567619,42568470,42569204,42569507,42569982,42571547 42567166,42567655,42568943,42569303,42569606,42570183,42572712 Gene ID= ENSG00000108788.11 TPM= 3.47 Transcript Type= NA chr17 42567050 42572712 42567050 42572712 + transcript2731.chr17.nic@MLX transcript2731.chr17.nic protein_coding 42567050,42567619,42568470,42569204,42569982,42571547 42567166,42567655,42568943,42569606,42570183,42572712 Gene ID= ENSG00000108788.11 TPM= 3.17 Transcript Type= NA chr17 42567068 42573239 42567068 42573239 + ENST00000435881.6@MLX ENST00000435881.6 protein_coding 42567068,42567619,42568470,42568837,42569204,42569507,42569982,42571547 42567166,42567655,42568559,42568943,42569303,42569606,42570183,42573239 Gene ID= ENSG00000108788.11 TPM= 48.29 Transcript Type= protein_coding chr17 42579515 42609384 42579515 42609384 - ENST00000309428.9@RETREG3 ENST00000309428.9 protein_coding 42609086,42592056,42587834,42586765,42586053,42585125,42583498,42582674,42579515 42609384,42592162,42587864,42586891,42586137,42585262,42583580,42582806,42582270 Gene ID= ENSG00000141699.10 TPM= 150.32 Transcript Type= protein_coding chr17 42609676 42615234 42609676 42615234 + ENST00000251413.7@TUBG1 ENST00000251413.7 protein_coding 42609676,42610108,42610423,42612075,42612427,42612947,42613647,42613849,42614260,42614496,42614844 42609786,42610220,42610590,42612143,42612506,42613073,42613733,42613998,42614412,42614657,42615234 Gene ID= ENSG00000131462.7 TPM= 92.37 Transcript Type= protein_coding chr17 42659244 42667006 42659244 42667006 + transcript2734.chr17.nnic@TUBG2 transcript2734.chr17.nnic protein_coding 42659244,42659834,42660149,42660639,42661201,42662973,42663377,42665476,42665678,42666087,42666323,42666603 42659552,42659946,42660316,42660707,42661227,42663052,42663503,42665562,42665827,42666239,42666484,42667006 Gene ID= ENSG00000037042.8 TPM= 3.62 Transcript Type= NA chr17 42659244 42667006 42659244 42667006 + transcript2747.chr17.nic@TUBG2 transcript2747.chr17.nic protein_coding 42659244,42659834,42660149,42660639,42663377,42665476,42665678,42666087,42666323,42666603 42659552,42659946,42660316,42663052,42663503,42665562,42665827,42666239,42666484,42667006 Gene ID= ENSG00000037042.8 TPM= 4.53 Transcript Type= NA chr17 42659305 42667006 42659305 42667006 + ENST00000251412.7@TUBG2 ENST00000251412.7 protein_coding 42659305,42659834,42660149,42660639,42662973,42663377,42665476,42665678,42666087,42666323,42666603 42659552,42659946,42660316,42660707,42663052,42663503,42665562,42665827,42666239,42666484,42667006 Gene ID= ENSG00000037042.8 TPM= 102.33 Transcript Type= protein_coding chr17 42667914 42676951 42667914 42676951 - ENST00000591022.5@PLEKHH3 ENST00000591022.5 protein_coding 42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42670994,42670573,42669918,42669430,42667914 42676951,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303 Gene ID= ENSG00000068137.14 TPM= 75.16 Transcript Type= protein_coding chr17 42667944 42676994 42667944 42676994 - ENST00000293349.10@PLEKHH3 ENST00000293349.10 protein_coding 42676402,42674354,42673934,42673643,42673399,42673176,42672086,42671351,42671003,42670573,42669918,42669430,42667944 42676994,42674409,42674013,42673834,42673556,42673296,42672392,42671558,42671130,42670705,42670376,42669621,42668303 Gene ID= ENSG00000068137.14 TPM= 44.37 Transcript Type= protein_coding chr17 42700275 42745030 42700275 42745030 - ENST00000428826.6@EZH1 ENST00000428826.6 protein_coding 42745011,42730828,42728825,42727635,42724305,42722795,42720273,42719105,42718454,42717976,42713209,42712289,42709846,42708876,42707958,42706007,42705088,42704602,42703740,42702877,42700275 42745030,42730918,42728952,42727763,42724424,42722915,42720449,42719207,42718617,42718067,42713389,42712485,42709937,42708916,42708083,42706185,42705183,42704683,42703820,42702961,42702592 Gene ID= ENSG00000108799.12 TPM= 11.77 Transcript Type= protein_coding chr17 42761194 42763036 42761194 42763036 + ENST00000253796.9@RAMP2 ENST00000253796.9 protein_coding 42761194,42761834,42762355,42762597 42761358,42761899,42762463,42763036 Gene ID= ENSG00000131477.10 TPM= 12.68 Transcript Type= protein_coding chr17 42761258 42763002 42761258 42763002 + ENST00000588576.1@RAMP2 ENST00000588576.1 protein_coding 42761258,42761834,42762597 42761358,42761899,42763002 Gene ID= ENSG00000131477.10 TPM= 2.72 Transcript Type= protein_coding chr17 42773436 42779599 42773436 42779599 + ENST00000253794.6@VPS25 ENST00000253794.6 protein_coding 42773436,42773733,42774646,42775381,42776245,42778957 42773528,42773878,42774699,42775469,42776320,42779599 Gene ID= ENSG00000131475.6 TPM= 86.93 Transcript Type= protein_coding chr17 42797634 42798704 42797634 42798704 - ENST00000328434.7@COA3 ENST00000328434.7 protein_coding 42798468,42797634 42798704,42798167 Gene ID= ENSG00000183978.7 TPM= 86.03 Transcript Type= protein_coding chr17 42810137 42824263 42810137 42824263 - ENST00000590099.5@BECN1 ENST00000590099.5 protein_coding 42824155,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810137 42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928 Gene ID= ENSG00000126581.12 TPM= 119.89 Transcript Type= protein_coding chr17 42810134 42824263 42810134 42824263 - ENST00000361523.8@BECN1 ENST00000361523.8 protein_coding 42824133,42823748,42820774,42819548,42818787,42818544,42818221,42815908,42814524,42813948,42811655,42810134 42824263,42823879,42820841,42819609,42818877,42818680,42818415,42816054,42814673,42814008,42811797,42810928 Gene ID= ENSG00000126581.12 TPM= 64.66 Transcript Type= protein_coding chr17 42844601 42850704 42844601 42850704 + ENST00000452774.2@AOC2 ENST00000452774.2 protein_coding 42844601,42849086,42849601,42850082 42846214,42849290,42849730,42850704 Gene ID= ENSG00000131480.8 TPM= 2.72 Transcript Type= protein_coding chr17 42851183 42858122 42851183 42858122 + transcript2808.chr17.nnic@AOC3 transcript2808.chr17.nnic protein_coding 42851183,42854448,42855444,42856275,42856634 42852943,42854733,42855573,42856429,42858122 Gene ID= ENSG00000131471.6 TPM= 6.34 Transcript Type= NA chr17 42851201 42858133 42851201 42858133 + transcript2810.chr17.nnic@AOC3 transcript2810.chr17.nnic protein_coding 42851201,42853272,42854448,42855444,42856275 42852943,42853364,42854733,42855573,42858133 Gene ID= ENSG00000131471.6 TPM= 16.6 Transcript Type= NA chr17 42851184 42858124 42851184 42858124 + ENST00000308423.6@AOC3 ENST00000308423.6 protein_coding 42851184,42854448,42855444,42856275 42852943,42854733,42855573,42858124 Gene ID= ENSG00000131471.6 TPM= 166.01 Transcript Type= protein_coding chr17 42851184 42858128 42851184 42858128 + ENST00000613571.1@AOC3 ENST00000613571.1 protein_coding 42851184,42854448,42856275 42852943,42854733,42858128 Gene ID= ENSG00000131471.6 TPM= 11.17 Transcript Type= protein_coding chr17 42950528 42964479 42950528 42964479 - transcript2820.chr17.nic@AARSD1 transcript2820.chr17.nic protein_coding 42964443,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42953724,42951800,42950528 42964479,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42953778,42951894,42950728 Gene ID= ENSG00000266967.6 TPM= 2.72 Transcript Type= NA chr17 42950546 42964476 42950546 42964476 - ENST00000427569.6@AARSD1 ENST00000427569.6 protein_coding 42964402,42964106,42961192,42957138,42956404,42956204,42955842,42955158,42954876,42953724,42951800,42950546 42964476,42964237,42961351,42957195,42956560,42956320,42955972,42955224,42954967,42953778,42951894,42950728 Gene ID= ENSG00000266967.6 TPM= 21.73 Transcript Type= protein_coding chr17 42980565 42993690 42980565 42993690 + ENST00000361677.5@RUNDC1 ENST00000361677.5 protein_coding 42980565,42987256,42989341,42990317,42990851 42981074,42987414,42989539,42990436,42993690 Gene ID= ENSG00000198863.7 TPM= 69.73 Transcript Type= protein_coding chr17 42998434 43002959 42998434 43002959 + ENST00000253788.9@RPL27 ENST00000253788.9 protein_coding 42998434,42998749,42999933,43002673,43002872 42998471,42998831,43000102,43002783,43002959 Gene ID= ENSG00000131469.12 TPM= 359.05 Transcript Type= protein_coding chr17 42998436 43002959 42998436 43002959 + ENST00000588830.1@RPL27 ENST00000588830.1 protein_coding 42998436,42998749,43002673,43002872 42998471,42998831,43002783,43002959 Gene ID= ENSG00000131469.12 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr17 42998477 43002932 42998477 43002932 + ENST00000589913.5@RPL27 ENST00000589913.5 protein_coding 42998477,42999933,43002673,43002872 42998831,43000102,43002783,43002932 Gene ID= ENSG00000131469.12 TPM= 6.79 Transcript Type= protein_coding chr17 43006719 43014460 43006719 43014460 + transcript2847.chr17.nic@IFI35 transcript2847.chr17.nic protein_coding 43006719,43012179,43013267,43013776,43014108 43006968,43013194,43013662,43013882,43014460 Gene ID= ENSG00000068079.7 TPM= 2.11 Transcript Type= NA chr17 43006740 43014456 43006740 43014456 + ENST00000438323.2@IFI35 ENST00000438323.2 protein_coding 43006740,43012179,43013047,43013267,43013476,43013776,43014108 43006968,43012277,43013194,43013379,43013662,43013882,43014456 Gene ID= ENSG00000068079.7 TPM= 27.92 Transcript Type= protein_coding chr17 43006725 43014456 43006725 43014456 + ENST00000415816.6@IFI35 ENST00000415816.6 protein_coding 43006725,43012179,43013047,43013267,43013476,43013776,43014108 43006968,43012277,43013194,43013373,43013662,43013882,43014456 Gene ID= ENSG00000068079.7 TPM= 24.3 Transcript Type= protein_coding chr17 43014605 43022418 43014605 43022418 - ENST00000355653.7@VAT1 ENST00000355653.7 protein_coding 43021936,43018592,43018036,43017841,43016307,43014605 43022418,43018799,43018206,43017930,43016548,43016144 Gene ID= ENSG00000108828.15 TPM= 1111.1 Transcript Type= protein_coding chr17 43125580 43134635 43125580 43134635 + transcript2855.chr17.nic@NBR2 transcript2855.chr17.nic transcribed_unprocessed_pseudogene 43125580,43131208,43132599 43125770,43131270,43134635 Gene ID= ENSG00000198496.10 TPM= 6.34 Transcript Type= NA chr17 43125580 43140341 43125580 43140341 + transcript2856.chr17.nic@NBR2 transcript2856.chr17.nic transcribed_unprocessed_pseudogene 43125580,43131208,43138657 43125770,43131270,43140341 Gene ID= ENSG00000198496.10 TPM= 7.24 Transcript Type= NA chr17 43170366 43211687 43170366 43211687 + transcript2859.chr17.nic@NBR1 transcript2859.chr17.nic protein_coding 43170366,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43191372,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901 43170943,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43191581,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211687 Gene ID= ENSG00000188554.13 TPM= 24.9 Transcript Type= NA chr17 43171164 43211687 43171164 43211687 + transcript2863.chr17.nnic@NBR1 transcript2863.chr17.nnic protein_coding 43171164,43175791,43177936,43179394,43180795,43186250,43189042,43189588,43190609,43193094,43193348,43194350,43194964,43196481,43196942,43200167,43201686,43202655,43203681,43209901 43171302,43175901,43177998,43179412,43180817,43186444,43189119,43189802,43190776,43193253,43193638,43194499,43195039,43196591,43197106,43200608,43201780,43202712,43203786,43211687 Gene ID= ENSG00000188554.13 TPM= 20.37 Transcript Type= NA chr17 43211875 43220041 43211875 43220041 + ENST00000612339.4@TMEM106A ENST00000612339.4 protein_coding 43211875,43212227,43213021,43213828,43215788,43216449,43216697,43217259,43217681 43211922,43212394,43213252,43213891,43215941,43216589,43216740,43217312,43220041 Gene ID= ENSG00000184988.8 TPM= 1.81 Transcript Type= protein_coding chr17 43398959 43401137 43398959 43401137 + ENST00000320033.4@ARL4D ENST00000320033.4 protein_coding 43398959,43399661 43399093,43401137 Gene ID= ENSG00000175906.4 TPM= 10.87 Transcript Type= protein_coding chr17 43483955 43544463 43483955 43544463 + transcript2871.chr17.nic@DHX8 transcript2871.chr17.nic protein_coding 43483955,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43536412,43544162 43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43536498,43544463 Gene ID= ENSG00000067596.10 TPM= 1.81 Transcript Type= NA chr17 43483963 43526786 43483963 43526786 + ENST00000540306.5@DHX8 ENST00000540306.5 protein_coding 43483963,43489449,43490391,43491165,43492183,43492681,43493445,43493683,43496181,43498862,43499956,43504644,43507003,43507503,43507809,43508339,43513362,43517167,43520130,43520751,43521369,43522047,43526496 43484185,43489534,43490463,43491250,43492292,43493040,43493589,43493886,43496268,43498959,43500103,43504825,43507197,43507688,43508019,43508520,43513502,43517322,43520267,43520879,43521565,43522226,43526786 Gene ID= ENSG00000067596.10 TPM= 2.72 Transcript Type= protein_coding chr17 43766128 43779000 43766128 43779000 - transcript2880.chr17.nic@DUSP3 transcript2880.chr17.nic protein_coding 43778800,43774712,43769582,43766128 43779000,43774938,43769814,43766784 Gene ID= ENSG00000108861.8 TPM= 3.62 Transcript Type= NA chr17 43766121 43778988 43766121 43778988 - ENST00000226004.7@DUSP3 ENST00000226004.7 protein_coding 43778800,43774712,43766121 43778988,43774938,43769814 Gene ID= ENSG00000108861.8 TPM= 143.98 Transcript Type= protein_coding chr17 43847144 43863633 43847144 43863633 + transcript2893.chr17.nic@CD300LG transcript2893.chr17.nic protein_coding 43847144,43848558,43853960,43855207,43857104,43861798 43847259,43848893,43854044,43855319,43857156,43863633 Gene ID= ENSG00000161649.12 TPM= 1.81 Transcript Type= NA chr17 43847176 43863629 43847176 43863629 + ENST00000317310.4@CD300LG ENST00000317310.4 protein_coding 43847176,43848558,43852912,43853807,43855207,43857104,43861798 43847259,43848893,43853013,43854044,43855319,43857156,43863629 Gene ID= ENSG00000161649.12 TPM= 1.81 Transcript Type= protein_coding chr17 43847153 43849909 43847153 43849909 + ENST00000588884.1@CD300LG ENST00000588884.1 protein_coding 43847153,43848558 43847259,43849909 Gene ID= ENSG00000161649.12 TPM= 1.81 Transcript Type= protein_coding chr17 44004546 44009060 44004546 44009060 + ENST00000293404.7@NAGS ENST00000293404.7 protein_coding 44004546,44005637,44006024,44006529,44007323,44007591,44008448 44005089,44005911,44006237,44006709,44007494,44007773,44009060 Gene ID= ENSG00000161653.10 TPM= 3.62 Transcript Type= protein_coding chr17 44011188 44023151 44011188 44023151 - ENST00000589334.5@TMEM101 ENST00000589334.5 protein_coding 44023039,44014816,44014357,44013009,44011188 44023151,44015155,44014537,44013155,44012236 Gene ID= ENSG00000091947.9 TPM= 55.24 Transcript Type= protein_coding chr17 44070864 44076349 44070864 44076349 + transcript2915.chr17.nic@G6PC3 transcript2915.chr17.nic protein_coding 44070864,44074160,44074680,44075310,44075680 44071183,44074266,44074770,44075451,44076349 Gene ID= ENSG00000141349.8 TPM= 5.89 Transcript Type= NA chr17 44070735 44076304 44070735 44076304 + ENST00000269097.8@G6PC3 ENST00000269097.8 protein_coding 44070735,44074160,44074680,44074969,44075310,44075680 44071183,44074266,44074770,44075087,44075451,44076304 Gene ID= ENSG00000141349.8 TPM= 106.85 Transcript Type= protein_coding chr17 44070751 44076300 44070751 44076300 + ENST00000585361.5@G6PC3 ENST00000585361.5 protein_coding 44070751,44074160,44074680,44074969,44075310,44075680 44071242,44074266,44074770,44075087,44075451,44076300 Gene ID= ENSG00000141349.8 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr17 44076746 44123638 44076746 44123638 - ENST00000225983.10@HDAC5 ENST00000225983.10 protein_coding 44123504,44117494,44110729,44093575,44093314,44093092,44092676,44092381,44092172,44091700,44091270,44088387,44087412,44086572,44085022,44084555,44083805,44083545,44082765,44082585,44080763,44080401,44080107,44079144,44078795,44078500,44076746 44123638,44117704,44110803,44093834,44093485,44093206,44092806,44092527,44092284,44091831,44091492,44088598,44087696,44086737,44085155,44084675,44083854,44083652,44082820,44082672,44080882,44080498,44080225,44079277,44078879,44078665,44078415 Gene ID= ENSG00000108840.15 TPM= 204.2 Transcript Type= protein_coding chr17 44175986 44186707 44175986 44186707 - transcript2926.chr17.nic@ASB16-AS1 transcript2926.chr17.nic antisense_RNA 44186565,44181623,44175986 44186707,44181720,44177816 Gene ID= ENSG00000267080.5 TPM= 3.17 Transcript Type= NA chr17 44175973 44186671 44175973 44186671 - ENST00000585457.5@ASB16-AS1 ENST00000585457.5 antisense_RNA 44186565,44182930,44181623,44175973 44186671,44183093,44181720,44177816 Gene ID= ENSG00000267080.5 TPM= 3.17 Transcript Type= antisense_RNA chr17 44186973 44191930 44186973 44191930 + transcript2934.chr17.nic@TMUB2 transcript2934.chr17.nic protein_coding 44186973,44187676,44187907,44188935,44190501 44187109,44187743,44188009,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 2.29 Transcript Type= NA chr17 44186973 44191930 44186973 44191930 + transcript2936.chr17.nnic@TMUB2 transcript2936.chr17.nnic protein_coding 44186973,44187676,44187907,44189022,44190501 44187109,44187743,44188009,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 5.91 Transcript Type= NA chr17 44186976 44191930 44186976 44191930 + transcript2949.chr17.nnic@TMUB2 transcript2949.chr17.nnic protein_coding 44186976,44187907,44188935,44190501 44187109,44188009,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 3.2 Transcript Type= NA chr17 44186981 44191930 44186981 44191930 + transcript2951.chr17.nic@TMUB2 transcript2951.chr17.nic protein_coding 44186981,44187907,44188935,44190501 44187743,44188009,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 4.83 Transcript Type= NA chr17 44187216 44191930 44187216 44191930 + transcript2952.chr17.nnic@TMUB2 transcript2952.chr17.nnic protein_coding 44187216,44187907,44189022,44190501 44187743,44188009,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 2.29 Transcript Type= NA chr17 44186982 44191930 44186982 44191930 + transcript2954.chr17.nic@TMUB2 transcript2954.chr17.nic protein_coding 44186982,44189022,44189424,44190501 44187743,44189299,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 4 Transcript Type= NA chr17 44186983 44191930 44186983 44191930 + transcript2955.chr17.nic@TMUB2 transcript2955.chr17.nic protein_coding 44186983,44189022,44189424,44190501 44187109,44189299,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 2.19 Transcript Type= NA chr17 44186982 44191930 44186982 44191930 + transcript2958.chr17.nic@TMUB2 transcript2958.chr17.nic protein_coding 44186982,44189022,44190501 44187743,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 7.72 Transcript Type= NA chr17 44187198 44191930 44187198 44191930 + transcript2961.chr17.nic@TMUB2 transcript2961.chr17.nic protein_coding 44187198,44189022,44190501 44187431,44189588,44191930 Gene ID= ENSG00000168591.15 TPM= 10.44 Transcript Type= NA chr17 44186990 44191698 44186990 44191698 + ENST00000538716.6@TMUB2 ENST00000538716.6 protein_coding 44186990,44187676,44189022,44190501 44187109,44187743,44189588,44191698 Gene ID= ENSG00000168591.15 TPM= 7.24 Transcript Type= protein_coding chr17 44186986 44191730 44186986 44191730 + ENST00000357984.7@TMUB2 ENST00000357984.7 protein_coding 44186986,44189022,44190501 44187109,44189588,44191730 Gene ID= ENSG00000168591.15 TPM= 2.09 Transcript Type= protein_coding chr17 44187206 44191726 44187206 44191726 + ENST00000319511.6@TMUB2 ENST00000319511.6 protein_coding 44187206,44188935,44190501 44187743,44189588,44191726 Gene ID= ENSG00000168591.15 TPM= 8.43 Transcript Type= protein_coding chr17 44187262 44191712 44187262 44191712 + ENST00000589785.1@TMUB2 ENST00000589785.1 protein_coding 44187262,44189022,44190501 44187400,44189588,44191712 Gene ID= ENSG00000168591.15 TPM= 1.81 Transcript Type= protein_coding chr17 44191806 44199937 44191806 44199937 - transcript2929.chr17.nic@ATXN7L3 transcript2929.chr17.nic protein_coding 44199496,44198020,44197598,44197228,44196929,44196396,44196034,44195800,44195419,44195097,44194768,44194517,44191806 44199937,44198130,44197730,44197399,44197026,44196418,44196100,44195828,44195487,44195140,44194839,44194674,44194411 Gene ID= ENSG00000087152.15 TPM= 23.54 Transcript Type= NA chr17 44205038 44221042 44205038 44221042 - transcript2969.chr17.nic@UBTF transcript2969.chr17.nic protein_coding 44220740,44218172,44216529,44215906,44215654,44213218,44212819,44212344,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44205038 44221042,44218296,44216704,44215989,44215809,44213282,44212939,44212454,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367 Gene ID= ENSG00000108312.14 TPM= 12.38 Transcript Type= NA chr17 44205038 44219083 44205038 44219083 - transcript2973.chr17.nnic@UBTF transcript2973.chr17.nnic protein_coding 44218965,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44205038 44219083,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367 Gene ID= ENSG00000108312.14 TPM= 13.28 Transcript Type= NA chr17 44205038 44222153 44205038 44222153 - transcript2976.chr17.nic@UBTF transcript2976.chr17.nic protein_coding 44221201,44218172,44216529,44215906,44215654,44213218,44212819,44211873,44211606,44211290,44211039,44210792,44210318,44210124,44209645,44209352,44207864,44207699,44207454,44205038 44222153,44218296,44216704,44215989,44215809,44213282,44212939,44212006,44211747,44211331,44211152,44210947,44210473,44210234,44209733,44209541,44207911,44207770,44207597,44207367 Gene ID= ENSG00000108312.14 TPM= 13.28 Transcript Type= NA chr17 44319625 44324870 44319625 44324870 - ENST00000225308.12@SLC25A39 ENST00000225308.12 protein_coding 44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319625 44324870,44323577,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116 Gene ID= ENSG00000013306.15 TPM= 184.1 Transcript Type= protein_coding chr17 44319621 44324858 44319621 44324858 - transcript2992.chr17.nic@SLC25A39 transcript2992.chr17.nic protein_coding 44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319621 44324858,44323343,44322852,44322528,44321767,44321558,44321231,44320731,44320436,44320276,44320116 Gene ID= ENSG00000013306.15 TPM= 7.71 Transcript Type= NA chr17 44319636 44324815 44319636 44324815 - ENST00000377095.9@SLC25A39 ENST00000377095.9 protein_coding 44324711,44323478,44323284,44322808,44322419,44321700,44321434,44321058,44320622,44320355,44320196,44319636 44324815,44323577,44323343,44322852,44322552,44321767,44321558,44321231,44320731,44320436,44320276,44320116 Gene ID= ENSG00000013306.15 TPM= 43.86 Transcript Type= protein_coding chr17 44345086 44353102 44345086 44353102 + ENST00000053867.7@GRN ENST00000053867.7 protein_coding 44345086,44349158,44349426,44349667,44350228,44350442,44350691,44351037,44351363,44351550,44352015,44352341,44352661 44345334,44349302,44349551,44349751,44350340,44350577,44350800,44351163,44351460,44351795,44352248,44352571,44353102 Gene ID= ENSG00000030582.17 TPM= 841.8 Transcript Type= protein_coding chr17 44345305 44353082 44345305 44353082 + ENST00000589265.5@GRN ENST00000589265.5 protein_coding 44345305,44349158,44349426,44349667,44350228,44351550,44352015,44352341,44352661 44345334,44349302,44349551,44349751,44350340,44351795,44352248,44352571,44353082 Gene ID= ENSG00000030582.17 TPM= 1.01 Transcript Type= protein_coding chr17 44353215 44363875 44353215 44363875 - ENST00000293443.11@FAM171A2 ENST00000293443.11 protein_coding 44363597,44359905,44359579,44356430,44356173,44355958,44355715,44353215 44363875,44360132,44359671,44356588,44356352,44356074,44355841,44355191 Gene ID= ENSG00000161682.14 TPM= 9.06 Transcript Type= protein_coding chr17 44677458 44689762 44677458 44689762 - ENST00000315286.12@CCDC43 ENST00000315286.12 protein_coding 44689550,44683872,44682003,44680585,44677458 44689762,44683959,44682138,44680643,44679043 Gene ID= ENSG00000180329.13 TPM= 24.9 Transcript Type= protein_coding chr17 44677440 44689779 44677440 44689779 - ENST00000457422.6@CCDC43 ENST00000457422.6 protein_coding 44689550,44683872,44682003,44677440 44689779,44683959,44682138,44679043 Gene ID= ENSG00000180329.13 TPM= 6.79 Transcript Type= protein_coding chr17 44850810 44899448 44850810 44899448 - transcript3045.chr17.nic@EFTUD2 transcript3045.chr17.nic protein_coding 44899369,44894417,44886585,44885256,44883649,44883093,44881687,44880554,44879556,44875934,44872446,44868287,44867807,44864930,44863655,44862713,44860432,44859905,44859080,44857075,44854918,44854556,44853517,44853296,44852409,44851710,44850810 44899448,44894525,44886750,44885334,44883724,44883158,44881722,44880644,44879638,44876100,44872570,44868350,44867897,44865065,44863782,44862906,44860543,44860045,44859181,44857157,44855004,44854682,44854356,44853390,44852562,44851817,44851369 Gene ID= ENSG00000108883.12 TPM= 8.6 Transcript Type= NA chr17 44889234 44903694 44889234 44903694 + transcript3050.chr17.nnic@CCDC103 transcript3050.chr17.nnic protein_coding 44889234,44899384,44900990,44901520,44902365 44889381,44899530,44901141,44901652,44903694 Gene ID= ENSG00000167131.16 TPM= 3.62 Transcript Type= NA chr17 45023335 45061118 45023335 45061118 - transcript3060.chr17.nnic@DCAKD transcript3060.chr17.nnic protein_coding 45060888,45034774,45034187,45033935,45030092,45023335 45061118,45034999,45034390,45034042,45030179,45024724 Gene ID= ENSG00000172992.11 TPM= 3.62 Transcript Type= NA chr17 45023335 45061118 45023335 45061118 - transcript3068.chr17.nnic@DCAKD transcript3068.chr17.nnic protein_coding 45061075,45034774,45034187,45030092,45023335 45061118,45034999,45034390,45030179,45024724 Gene ID= ENSG00000172992.11 TPM= 4.53 Transcript Type= NA chr17 45023344 45061018 45023344 45061018 - ENST00000342350.9@DCAKD ENST00000342350.9 protein_coding 45060888,45034774,45034187,45030092,45023344 45061018,45034999,45034390,45030179,45024724 Gene ID= ENSG00000172992.11 TPM= 9.96 Transcript Type= protein_coding chr17 45023346 45061109 45023346 45061109 - ENST00000310604.8@DCAKD ENST00000310604.8 protein_coding 45060888,45034774,45034187,45030092,45023346 45061109,45035002,45034390,45030179,45024724 Gene ID= ENSG00000172992.11 TPM= 16.3 Transcript Type= protein_coding chr17 45051610 45109016 45051610 45109016 + ENST00000592782.5@NMT1 ENST00000592782.5 protein_coding 45051610,45061283,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45104859,45105619 45051693,45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45103876,45104996,45109016 Gene ID= ENSG00000136448.11 TPM= 118.33 Transcript Type= protein_coding chr17 45061299 45109015 45061299 45109015 + transcript3078.chr17.nic@NMT1 transcript3078.chr17.nic protein_coding 45061299,45081644,45086508,45093685,45096194,45097128,45098382,45099405,45102951,45103709,45105619 45061460,45081752,45086652,45093803,45096285,45097244,45098552,45099513,45103121,45104996,45109015 Gene ID= ENSG00000136448.11 TPM= 16.91 Transcript Type= NA chr17 45111651 45132529 45111651 45132529 - transcript3083.chr17.nnic@PLCD3 transcript3083.chr17.nnic protein_coding 45132248,45121211,45120902,45120325,45118815,45118291,45117994,45116632,45115344,45115094,45114250,45113439,45113122,45112863,45111651 45132529,45121372,45121130,45120454,45119043,45118492,45118138,45116784,45115490,45115244,45114366,45113605,45113257,45113012,45112771 Gene ID= ENSG00000161714.11 TPM= 7.24 Transcript Type= NA chr17 45135657 45144180 45135657 45144180 + transcript3094.chr17.nic@ACBD4 transcript3094.chr17.nic protein_coding 45135657,45136500,45136692,45137019,45137368,45137722,45137913,45139021,45143443 45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144180 Gene ID= ENSG00000181513.14 TPM= 1.81 Transcript Type= NA chr17 45132631 45144176 45132631 45144176 + ENST00000591859.5@ACBD4 ENST00000591859.5 protein_coding 45132631,45135341,45135839,45136108,45136500,45136692,45137019,45137368,45137722,45137913,45139021,45143443 45132663,45135592,45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144176 Gene ID= ENSG00000181513.14 TPM= 5.43 Transcript Type= protein_coding chr17 45135687 45144181 45135687 45144181 + ENST00000398322.7@ACBD4 ENST00000398322.7 protein_coding 45135687,45136500,45136692,45137019,45137368,45137760,45137913,45139021,45143443 45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144181 Gene ID= ENSG00000181513.14 TPM= 3.62 Transcript Type= protein_coding chr17 45135708 45144176 45135708 45144176 + ENST00000321854.12@ACBD4 ENST00000321854.12 protein_coding 45135708,45136108,45136500,45136692,45137019,45137368,45137760,45137913,45139021,45143443 45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45144176 Gene ID= ENSG00000181513.14 TPM= 20.83 Transcript Type= protein_coding chr17 45135694 45142959 45135694 45142959 + ENST00000376955.8@ACBD4 ENST00000376955.8 protein_coding 45135694,45136108,45136500,45136692,45137019,45137368,45137760,45137923,45139021,45142583 45135953,45136232,45136620,45136776,45137139,45137454,45137830,45137988,45139160,45142959 Gene ID= ENSG00000181513.14 TPM= 2.72 Transcript Type= protein_coding chr17 45149120 45161563 45149120 45161563 - transcript3102.chr17.nnic@AC138150.1 transcript3102.chr17.nnic antisense_RNA 45161461,45150876,45149120 45161563,45150919,45150024 Gene ID= ENSG00000224505.2 TPM= 2.72 Transcript Type= NA chr17 45160700 45170040 45160700 45170040 + ENST00000307275.7@HEXIM2 ENST00000307275.7 protein_coding 45160700,45162488,45162750,45169015 45160943,45162635,45162859,45170040 Gene ID= ENSG00000168517.10 TPM= 2.72 Transcript Type= protein_coding chr17 45160701 45170040 45160701 45170040 + transcript3103.chr17.nic@HEXIM2 transcript3103.chr17.nic protein_coding 45160701,45162750,45169015 45162635,45162859,45170040 Gene ID= ENSG00000168517.10 TPM= 3.62 Transcript Type= NA chr17 45161917 45170035 45161917 45170035 + ENST00000592695.1@HEXIM2 ENST00000592695.1 protein_coding 45161917,45162750,45169015 45162031,45162859,45170035 Gene ID= ENSG00000168517.10 TPM= 3.62 Transcript Type= protein_coding chr17 45221611 45247314 45221611 45247314 + transcript3108.chr17.nic@FMNL1 transcript3108.chr17.nic protein_coding 45221611,45230604,45232367,45233224,45233648,45234072,45236136,45237281,45237546,45238564,45238955,45240476,45241129,45241382,45241847,45242341,45243118,45243791,45244176,45244819,45244979,45245253,45245632,45245878,45246210,45246867 45222253,45230687,45232480,45233297,45233731,45234200,45236244,45237357,45237639,45238638,45239065,45240625,45241230,45241634,45242146,45242465,45243320,45244025,45244244,45244899,45245108,45245416,45245733,45245973,45246330,45247314 Gene ID= ENSG00000184922.13 TPM= 6.34 Transcript Type= NA chr17 45247267 45247843 45247267 45247843 - ENST00000589518.1@AC008105.2 ENST00000589518.1 antisense_RNA 45247701,45247267 45247843,45247516 Gene ID= ENSG00000233483.2 TPM= 3.62 Transcript Type= antisense_RNA chr17 45263121 45317040 45263121 45317040 - ENST00000344686.6@MAP3K14 ENST00000344686.6 protein_coding 45316960,45290490,45289236,45287154,45286431,45284812,45274464,45274123,45273503,45271058,45270413,45267406,45267092,45266537,45265163,45263121 45317040,45290765,45289305,45287364,45287045,45284949,45274593,45274254,45273607,45271221,45270563,45267759,45267198,45266681,45265263,45264800 Gene ID= ENSG00000006062.14 TPM= 7.24 Transcript Type= protein_coding chr17 45393901 45410388 45393901 45410388 - transcript3126.chr17.nic@ARHGAP27 transcript3126.chr17.nic protein_coding 45410232,45405676,45404924,45404601,45404445,45404269,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393901 45410388,45406083,45405106,45404681,45404528,45404334,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633 Gene ID= ENSG00000159314.11 TPM= 5.43 Transcript Type= NA chr17 45393902 45410424 45393902 45410424 - ENST00000532038.5@ARHGAP27 ENST00000532038.5 protein_coding 45410232,45405676,45404924,45404601,45404445,45404029,45403619,45402714,45397949,45396916,45396668,45396487,45396207,45395983,45395744,45393902 45410424,45406083,45405106,45404681,45404528,45404096,45403709,45402818,45398047,45397024,45396790,45396585,45396284,45396117,45395849,45395633 Gene ID= ENSG00000159314.11 TPM= 2.72 Transcript Type= protein_coding chr17 45435901 45490779 45435901 45490779 - transcript3133.chr17.nnic@PLEKHM1 transcript3133.chr17.nnic protein_coding 45490652,45482437,45477900,45475100,45468209,45458169,45453355,45450618,45445470,45440163,45439477,45435901 45490779,45482525,45478147,45475726,45468593,45458439,45454272,45450763,45445618,45440226,45439634,45437969 Gene ID= ENSG00000225190.10 TPM= 4.98 Transcript Type= NA chr17 45435900 45490744 45435900 45490744 - ENST00000430334.7@PLEKHM1 ENST00000430334.7 protein_coding 45490652,45482437,45477900,45475100,45468209,45458169,45453355,45450618,45445470,45440163,45439477,45435900 45490744,45482525,45478147,45475726,45468593,45458439,45454272,45450763,45445663,45440226,45439634,45437969 Gene ID= ENSG00000225190.10 TPM= 26.71 Transcript Type= protein_coding chr17 46029968 46225329 46029968 46225329 - transcript3148.chr17.nic@KANSL1 transcript3148.chr17.nic protein_coding 46224561,46223671,46170855,46094560,46082441,46067549,46066537,46050533,46039702,46039027,46038538,46034161,46033403,46033080,46032047,46029968 46225329,46223804,46172232,46094701,46082542,46067667,46066732,46050704,46039884,46039215,46038686,46034285,46033460,46033192,46032299,46031703 Gene ID= ENSG00000120071.13 TPM= 5.51 Transcript Type= NA chr17 46029956 46192800 46029956 46192800 - ENST00000262419.10@KANSL1 ENST00000262419.10 protein_coding 46192419,46170855,46094560,46082441,46067549,46066537,46050533,46039702,46039027,46038538,46034161,46033403,46033080,46032047,46029956 46192800,46172232,46094701,46082542,46067667,46066732,46050704,46039884,46039215,46038686,46034285,46033460,46033192,46032299,46031703 Gene ID= ENSG00000120071.13 TPM= 4.6 Transcript Type= protein_coding chr17 46029916 46193198 46029916 46193198 - ENST00000432791.6@KANSL1 ENST00000432791.6 protein_coding 46192823,46170855,46094560,46082441,46067549,46066537,46050533,46039702,46039027,46038538,46034161,46033403,46033080,46032047,46029916 46193198,46172232,46094701,46082542,46067667,46066732,46050704,46039884,46039215,46038686,46034285,46033460,46033192,46032299,46031703 Gene ID= ENSG00000120071.13 TPM= 4.6 Transcript Type= protein_coding chr17 46029917 46193400 46029917 46193400 - ENST00000638275.1@KANSL1 ENST00000638275.1 protein_coding 46192823,46170855,46094560,46082441,46067549,46066537,46050533,46039702,46038538,46034161,46033403,46033080,46032047,46029917 46193400,46172232,46094701,46082542,46067667,46066732,46050704,46039884,46038686,46034282,46033460,46033192,46032299,46031703 Gene ID= ENSG00000120071.13 TPM= 4.3 Transcript Type= protein_coding chr17 46193576 46196721 46193576 46196721 + ENST00000398275.4@KANSL1-AS1 ENST00000398275.4 antisense_RNA 46193576,46196368 46193738,46196721 Gene ID= ENSG00000214401.4 TPM= 6.34 Transcript Type= antisense_RNA chr17 46590695 46757460 46590695 46757460 + transcript3158.chr17.nic@NSF transcript3158.chr17.nic protein_coding 46590695,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853,46726549,46728855,46749773,46751503,46755314,46755499,46755802 46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46713986,46726615,46728934,46749907,46751616,46755369,46755597,46757460 Gene ID= ENSG00000073969.18 TPM= 7.24 Transcript Type= NA chr17 46590669 46757464 46590669 46757464 + ENST00000398238.8@NSF ENST00000398238.8 protein_coding 46590669,46624244,46626613,46630411,46637376,46640054,46640643,46643104,46674414,46692903,46693847,46694475,46704759,46710963,46713853,46726549,46728855,46749773,46751503,46755314,46755802 46590787,46624329,46626712,46630450,46637542,46640161,46640718,46643259,46674613,46693068,46693921,46694662,46704854,46711119,46713986,46726615,46728934,46749907,46751616,46755369,46757464 Gene ID= ENSG00000073969.18 TPM= 100.52 Transcript Type= protein_coding chr17 46923075 46942015 46923075 46942015 + ENST00000640608.1@GOSR2 ENST00000640608.1 protein_coding 46923075,46929520,46931099,46932067,46938599 46923221,46929584,46931207,46932199,46942015 Gene ID= ENSG00000108433.16 TPM= 6.34 Transcript Type= protein_coding chr17 47058816 47100285 47058816 47100285 - transcript3181.chr17.nnic@AC068152.1 transcript3181.chr17.nnic processed_transcript 47099835,47072472,47058816 47100285,47072559,47060147 Gene ID= ENSG00000262879.5 TPM= 1.81 Transcript Type= NA chr17 47117947 47189109 47117947 47189109 - transcript3186.chr17.nic@CDC27 transcript3186.chr17.nic protein_coding 47188746,47181562,47171917,47169917,47158206,47157230,47156913,47154672,47151806,47143883,47142229,47141853,47138739,47137152,47132257,47129393,47123886,47122444,47117947 47189109,47181637,47172064,47170042,47158303,47157384,47157124,47154786,47151918,47143982,47142436,47142022,47138891,47137360,47132374,47129521,47123960,47122600,47121017 Gene ID= ENSG00000004897.11 TPM= 5.43 Transcript Type= NA chr17 47488630 47492532 47488630 47492532 - transcript3194.chr17.nnic@MRPL45P2 transcript3194.chr17.nnic transcribed_unprocessed_pseudogene 47492394,47491015,47490166,47488630 47492532,47491192,47490295,47488955 Gene ID= ENSG00000228782.7 TPM= 2.72 Transcript Type= NA chr17 47531156 47623276 47531156 47623276 + transcript3198.chr17.nnic@NPEPPS transcript3198.chr17.nnic protein_coding 47531156,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619278,47619737,47621768 47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619372,47619784,47623276 Gene ID= ENSG00000141279.15 TPM= 14.58 Transcript Type= NA chr17 47531193 47624825 47531193 47624825 + transcript3199.chr17.nnic@NPEPPS transcript3199.chr17.nnic protein_coding 47531193,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768,47623797 47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47621970,47624825 Gene ID= ENSG00000141279.15 TPM= 4.17 Transcript Type= NA chr17 47531064 47623276 47531064 47623276 + ENST00000322157.8@NPEPPS ENST00000322157.8 protein_coding 47531064,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47619737,47621768 47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47623276 Gene ID= ENSG00000141279.15 TPM= 114.64 Transcript Type= protein_coding chr17 47531177 47623276 47531177 47623276 + transcript3203.chr17.nic@NPEPPS transcript3203.chr17.nic protein_coding 47531177,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605466,47612460,47613669,47618350,47619009,47619737,47621768 47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619164,47619784,47623276 Gene ID= ENSG00000141279.15 TPM= 5.07 Transcript Type= NA chr17 47531194 47623276 47531194 47623276 + transcript3206.chr17.nic@NPEPPS transcript3206.chr17.nic protein_coding 47531194,47545909,47569417,47579390,47582742,47585500,47586148,47586365,47587230,47590717,47591956,47592485,47596353,47599676,47601608,47603915,47605333,47612460,47613669,47618350,47619009,47621768 47531555,47545993,47569494,47579511,47582849,47585700,47586244,47586398,47587344,47590881,47592060,47592545,47596462,47599739,47601747,47604049,47605552,47612602,47613725,47618457,47619784,47623276 Gene ID= ENSG00000141279.15 TPM= 5.52 Transcript Type= NA chr17 47649838 47685505 47649838 47685505 + ENST00000290158.8@KPNB1 ENST00000290158.8 protein_coding 47649838,47650386,47652694,47656860,47658508,47661119,47663089,47664159,47665057,47668186,47669678,47670702,47673018,47673490,47674638,47676409,47677020,47678046,47678308,47680020,47680508,47682404 47650284,47650444,47652876,47657060,47658660,47661178,47663178,47664269,47665158,47668410,47669869,47670832,47673165,47673561,47674782,47676491,47677127,47678189,47678413,47680134,47680669,47685505 Gene ID= ENSG00000108424.9 TPM= 68.82 Transcript Type= protein_coding chr17 47807372 47821770 47807372 47821770 - ENST00000007414.7@OSBPL7 ENST00000007414.7 protein_coding 47821666,47820204,47819971,47819729,47818986,47818506,47818269,47817256,47816780,47816563,47816388,47816107,47815215,47814521,47813587,47813266,47810772,47810594,47809334,47809076,47808864,47808538,47807372 47821770,47820365,47820096,47819782,47819099,47818616,47818386,47817359,47816872,47816695,47816482,47816202,47815352,47814614,47813834,47813403,47810835,47810672,47809478,47809220,47808990,47808660,47808399 Gene ID= ENSG00000006025.11 TPM= 2.72 Transcript Type= protein_coding chr17 47823490 47831534 47823490 47831534 - ENST00000414011.1@MRPL10 ENST00000414011.1 protein_coding 47831460,47829139,47828501,47827040,47826637,47823490 47831534,47829236,47828670,47827204,47826781,47824458 Gene ID= ENSG00000159111.12 TPM= 1.81 Transcript Type= protein_coding chr17 47837684 47841272 47837684 47841272 - transcript3226.chr17.nic@SCRN2 transcript3226.chr17.nic protein_coding 47841185,47840670,47840191,47839444,47838791,47838531,47838270,47837684 47841272,47840843,47840372,47839643,47839006,47838696,47838450,47838002 Gene ID= ENSG00000141295.13 TPM= 5.61 Transcript Type= NA chr17 47837686 47841276 47837686 47841276 - transcript3234.chr17.nic@SCRN2 transcript3234.chr17.nic protein_coding 47841208,47840670,47839444,47838791,47838531,47837686 47841276,47840843,47840372,47839006,47838696,47838450 Gene ID= ENSG00000141295.13 TPM= 3.62 Transcript Type= NA chr17 47837687 47841273 47837687 47841273 - transcript3239.chr17.nic@SCRN2 transcript3239.chr17.nic protein_coding 47841208,47840670,47839444,47838791,47837687 47841273,47840843,47840372,47839006,47838696 Gene ID= ENSG00000141295.13 TPM= 2.72 Transcript Type= NA chr17 47837687 47841288 47837687 47841288 - transcript3240.chr17.nic@SCRN2 transcript3240.chr17.nic protein_coding 47841208,47839444,47838791,47837687 47841288,47840843,47839006,47838696 Gene ID= ENSG00000141295.13 TPM= 3.62 Transcript Type= NA chr17 47837700 47841333 47837700 47841333 - ENST00000290216.13@SCRN2 ENST00000290216.13 protein_coding 47841208,47840670,47840191,47839444,47838791,47838531,47838270,47837700 47841333,47840843,47840372,47839643,47839006,47838696,47838450,47838002 Gene ID= ENSG00000141295.13 TPM= 84.4 Transcript Type= protein_coding chr17 47837707 47841173 47837707 47841173 - ENST00000584123.5@SCRN2 ENST00000584123.5 protein_coding 47840670,47840191,47839444,47838791,47838531,47838270,47837707 47841173,47840372,47839643,47839006,47838696,47838450,47838002 Gene ID= ENSG00000141295.13 TPM= 9.06 Transcript Type= protein_coding chr17 47837692 47841289 47837692 47841289 - ENST00000407215.7@SCRN2 ENST00000407215.7 protein_coding 47841208,47840670,47840191,47839444,47838791,47838531,47837692 47841289,47840843,47840372,47839643,47839006,47838696,47838450 Gene ID= ENSG00000141295.13 TPM= 23.73 Transcript Type= protein_coding chr17 47844914 47851193 47844914 47851193 - ENST00000536300.1@SP6 ENST00000536300.1 protein_coding 47850919,47844914 47851193,47848486 Gene ID= ENSG00000189120.4 TPM= 4.53 Transcript Type= protein_coding chr17 47891255 47895812 47891255 47895812 - ENST00000582787.1@AC018521.5 ENST00000582787.1 processed_transcript 47895703,47893900,47891255 47895812,47893958,47891581 Gene ID= ENSG00000264920.1 TPM= 1.81 Transcript Type= lincRNA chr17 47896248 47928956 47896248 47928956 + transcript3246.chr17.nic@SP2 transcript3246.chr17.nic protein_coding 47896248,47897815,47915312,47916156,47922962,47924919,47925348,47927724 47896293,47897927,47915388,47917130,47923274,47925093,47925541,47928956 Gene ID= ENSG00000167182.14 TPM= 2.72 Transcript Type= NA chr17 47896150 47928957 47896150 47928957 + ENST00000376741.4@SP2 ENST00000376741.4 protein_coding 47896150,47915312,47916156,47922962,47924919,47925348,47927724 47896293,47915388,47917130,47923274,47925093,47925541,47928957 Gene ID= ENSG00000167182.14 TPM= 12.68 Transcript Type= protein_coding chr17 47941523 47949308 47941523 47949308 + ENST00000642017.1@PNPO ENST00000642017.1 protein_coding 47941523,47943306,47944616,47945559,47945861,47946323,47946614 47941813,47943430,47944715,47945612,47945989,47946393,47949308 Gene ID= ENSG00000108439.10 TPM= 129.49 Transcript Type= protein_coding chr17 47971117 47981786 47971117 47981786 + transcript3267.chr17.nic@AC018521.1 transcript3267.chr17.nic processed_transcript 47971117,47973519,47973931,47974400,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437 47971407,47973650,47974031,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981786 Gene ID= ENSG00000263798.2 TPM= 3.92 Transcript Type= NA chr17 47971117 47981786 47971117 47981786 + transcript3271.chr17.nic@AC018521.1 transcript3271.chr17.nic processed_transcript 47971117,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437 47971407,47973650,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981786 Gene ID= ENSG00000263798.2 TPM= 19.17 Transcript Type= NA chr17 47971116 47981786 47971116 47981786 + transcript3252.chr17.nic@CDK5RAP3 transcript3252.chr17.nic protein_coding 47971116,47971362,47973519,47973931,47974400,47975159,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437,47981587 47971152,47971407,47973650,47974031,47974448,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981459,47981786 Gene ID= ENSG00000108465.14 TPM= 4.53 Transcript Type= NA chr17 47971013 47981786 47971013 47981786 + transcript3254.chr17.nic@CDK5RAP3 transcript3254.chr17.nic protein_coding 47971013,47971362,47973519,47973931,47974400,47975159,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437 47971152,47971407,47973650,47974031,47974448,47975337,47975638,47976013,47976822,47977910,47978917,47980798,47981334,47981786 Gene ID= ENSG00000108465.14 TPM= 3.92 Transcript Type= NA chr17 47971121 47981786 47971121 47981786 + transcript3265.chr17.nic@CDK5RAP3 transcript3265.chr17.nic protein_coding 47971121,47971362,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437 47971152,47971407,47973693,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981786 Gene ID= ENSG00000108465.14 TPM= 4.68 Transcript Type= NA chr17 47971013 47981786 47971013 47981786 + transcript3270.chr17.nic@CDK5RAP3 transcript3270.chr17.nic protein_coding 47971013,47971362,47973519,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437 47971152,47971407,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981786 Gene ID= ENSG00000108465.14 TPM= 3.78 Transcript Type= NA chr17 47971104 47981772 47971104 47981772 + ENST00000584063.5@CDK5RAP3 ENST00000584063.5 protein_coding 47971104,47971362,47973519,47973931,47974400,47975514,47976712,47977832,47978829,47980593,47981163,47981437 47971152,47971407,47973650,47974031,47975337,47976013,47976822,47977910,47978917,47980798,47981334,47981772 Gene ID= ENSG00000108465.14 TPM= 29.28 Transcript Type= retained_intron chr17 47971125 47981768 47971125 47981768 + ENST00000585163.5@CDK5RAP3 ENST00000585163.5 protein_coding 47971125,47971362,47973519,47973931,47974400,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437 47971152,47971407,47973650,47974031,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981768 Gene ID= ENSG00000108465.14 TPM= 4.68 Transcript Type= retained_intron chr17 47971156 47981734 47971156 47981734 + ENST00000580391.5@CDK5RAP3 ENST00000580391.5 protein_coding 47971156,47973519,47973931,47974400,47975159,47975514,47975869,47976712,47977832,47978829,47980593,47981163,47981437 47971407,47973650,47974035,47974448,47975337,47975653,47976013,47976822,47977910,47978917,47980798,47981334,47981734 Gene ID= ENSG00000108465.14 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr17 48026169 48037841 48026169 48037841 - transcript3277.chr17.nic@COPZ2 transcript3277.chr17.nic protein_coding 48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48027676,48026169 48037841,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48027789,48026475 Gene ID= ENSG00000005243.9 TPM= 17.21 Transcript Type= NA chr17 48026142 48037841 48026142 48037841 - transcript3278.chr17.nic@COPZ2 transcript3278.chr17.nic protein_coding 48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026142 48037841,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48027789 Gene ID= ENSG00000005243.9 TPM= 2.72 Transcript Type= NA chr17 48026143 48037841 48026143 48037841 - transcript3286.chr17.nnic@COPZ2 transcript3286.chr17.nnic protein_coding 48037667,48036851,48033863,48029125,48028472,48026143 48037841,48036925,48033944,48029176,48028510,48026475 Gene ID= ENSG00000005243.9 TPM= 3.62 Transcript Type= NA chr17 48031606 48037841 48031606 48037841 - transcript3287.chr17.nic@COPZ2 transcript3287.chr17.nic protein_coding 48037667,48036851,48033863,48033211,48032686,48031606 48037841,48036925,48033944,48033302,48032741,48032233 Gene ID= ENSG00000005243.9 TPM= 5.43 Transcript Type= NA chr17 48026171 48037782 48026171 48037782 - ENST00000621465.4@COPZ2 ENST00000621465.4 protein_coding 48037667,48036851,48033863,48033211,48032686,48032156,48029125,48028472,48026171 48037782,48036925,48033944,48033302,48032741,48032233,48029176,48028510,48026475 Gene ID= ENSG00000005243.9 TPM= 19.02 Transcript Type= protein_coding chr17 48048775 48061492 48048775 48061492 + transcript3303.chr17.nic@NFE2L1 transcript3303.chr17.nic protein_coding 48048775,48050607,48056386,48057032,48057344,48058295 48048864,48051628,48056598,48057121,48057502,48061492 Gene ID= ENSG00000082641.15 TPM= 67.38 Transcript Type= NA chr17 48048775 48061492 48048775 48061492 + transcript3312.chr17.nic@NFE2L1 transcript3312.chr17.nic protein_coding 48048775,48050607,48056386,48057344,48058295 48048864,48051628,48056598,48057502,48061492 Gene ID= ENSG00000082641.15 TPM= 48.47 Transcript Type= NA chr17 48048359 48061480 48048359 48061480 + ENST00000362042.7@NFE2L1 ENST00000362042.7 protein_coding 48048359,48050607,48056386,48057032,48057344,48058295 48048462,48051628,48056598,48057121,48057502,48061480 Gene ID= ENSG00000082641.15 TPM= 68.74 Transcript Type= protein_coding chr17 48048370 48061479 48048370 48061479 + ENST00000357480.9@NFE2L1 ENST00000357480.9 protein_coding 48048370,48050607,48056386,48057344,48058295 48048462,48051628,48056598,48057502,48061479 Gene ID= ENSG00000082641.15 TPM= 57.35 Transcript Type= protein_coding chr17 48048363 48061487 48048363 48061487 + ENST00000585291.5@NFE2L1 ENST00000585291.5 protein_coding 48048363,48050607,48051117,48056386,48057344,48058295 48048462,48050819,48051628,48056598,48057502,48061487 Gene ID= ENSG00000082641.15 TPM= 10.44 Transcript Type= protein_coding chr17 48070052 48101521 48070052 48101521 - ENST00000225603.8@CBX1 ENST00000225603.8 protein_coding 48101268,48076865,48076001,48075006,48070052 48101521,48077041,48076178,48075100,48071579 Gene ID= ENSG00000108468.14 TPM= 9.06 Transcript Type= protein_coding chr17 48107532 48123071 48107532 48123071 + transcript3331.chr17.nic@SNX11 transcript3331.chr17.nic protein_coding 48107532,48112031,48112574,48113301,48118704,48118974,48121235 48107596,48112085,48112660,48113401,48118799,48119186,48123071 Gene ID= ENSG00000002919.14 TPM= 3.32 Transcript Type= NA chr17 48107777 48123071 48107777 48123071 + transcript3333.chr17.nic@SNX11 transcript3333.chr17.nic protein_coding 48107777,48112031,48113301,48118704,48118974,48121235 48107838,48112660,48113401,48118799,48119186,48123071 Gene ID= ENSG00000002919.14 TPM= 2.87 Transcript Type= NA chr17 48107585 48122743 48107585 48122743 + ENST00000359238.6@SNX11 ENST00000359238.6 protein_coding 48107585,48112031,48112574,48113301,48118704,48118974,48121235 48107838,48112085,48112660,48113401,48118799,48119186,48122743 Gene ID= ENSG00000002919.14 TPM= 20.08 Transcript Type= protein_coding chr17 48133440 48430280 48133440 48430280 - transcript3335.chr17.nnic@SKAP1 transcript3335.chr17.nnic protein_coding 48430075,48396680,48363789,48345905,48193653,48189423,48187843,48184723,48182394,48180054,48170609,48162469,48137229,48133440 48430280,48396785,48363814,48346006,48193771,48189500,48187926,48184847,48182457,48180248,48170659,48162569,48137337,48133816 Gene ID= ENSG00000141293.15 TPM= 2.72 Transcript Type= NA chr17 48133440 48430190 48133440 48430190 - ENST00000336915.10@SKAP1 ENST00000336915.10 protein_coding 48430075,48396680,48363789,48345905,48189423,48187843,48184723,48182394,48180054,48170609,48162469,48137229,48133440 48430190,48396785,48363814,48346006,48189500,48187926,48184847,48182457,48180248,48170659,48162569,48137337,48133816 Gene ID= ENSG00000141293.15 TPM= 20.83 Transcript Type= protein_coding chr17 48542655 48544989 48542655 48544989 - ENST00000330070.5@HOXB2 ENST00000330070.5 protein_coding 48544521,48542655 48544989,48543747 Gene ID= ENSG00000173917.10 TPM= 31.69 Transcript Type= protein_coding chr17 48575513 48580111 48575513 48580111 - ENST00000332503.5@HOXB4 ENST00000332503.5 protein_coding 48577863,48575513 48580111,48577020 Gene ID= ENSG00000182742.5 TPM= 8.15 Transcript Type= protein_coding chr17 48607227 48611020 48607227 48611020 - ENST00000239165.8@HOXB7 ENST00000239165.8 protein_coding 48610519,48607227 48611020,48608095 Gene ID= ENSG00000260027.4 TPM= 13.58 Transcript Type= protein_coding chr17 48830988 48865245 48830988 48865245 + ENST00000258947.7@CALCOCO2 ENST00000258947.7 protein_coding 48830988,48841698,48848064,48848322,48849252,48851089,48851559,48852506,48852926,48856092,48860314,48862276,48862838 48831078,48841887,48848166,48848455,48849377,48851177,48851628,48852628,48853012,48856187,48860449,48862304,48865245 Gene ID= ENSG00000136436.14 TPM= 175.22 Transcript Type= protein_coding chr17 48892765 48895871 48892765 48895871 + ENST00000355938.9@ATP5G1 ENST00000355938.9 protein_coding 48892765,48893409,48894372,48895156,48895655 48892840,48893456,48894449,48895334,48895871 Gene ID= ENSG00000159199.13 TPM= 107.01 Transcript Type= protein_coding chr17 48892817 48895869 48892817 48895869 + ENST00000393366.6@ATP5G1 ENST00000393366.6 protein_coding 48892817,48893409,48894372,48895156,48895655 48892910,48893456,48894449,48895334,48895869 Gene ID= ENSG00000159199.13 TPM= 40.9 Transcript Type= protein_coding chr17 48892797 48895871 48892797 48895871 + ENST00000503641.5@ATP5G1 ENST00000503641.5 protein_coding 48892797,48893409,48894372,48895183,48895655 48892840,48893456,48894449,48895334,48895871 Gene ID= ENSG00000159199.13 TPM= 16.91 Transcript Type= protein_coding chr17 48908369 48929060 48908369 48929060 + transcript3374.chr17.nnic@UBE2Z transcript3374.chr17.nnic protein_coding 48908369,48908704,48910808,48912834,48916076,48921160,48922847,48926964 48908660,48908820,48910880,48913021,48916187,48921272,48922937,48929060 Gene ID= ENSG00000159202.17 TPM= 14.26 Transcript Type= NA chr17 48908353 48929060 48908353 48929060 + transcript3388.chr17.nic@UBE2Z transcript3388.chr17.nic protein_coding 48908353,48910808,48916076,48921160,48922847,48926964 48908820,48910880,48916187,48921272,48922937,48929060 Gene ID= ENSG00000159202.17 TPM= 10.64 Transcript Type= NA chr17 48908369 48929056 48908369 48929056 + ENST00000360943.9@UBE2Z ENST00000360943.9 protein_coding 48908369,48910808,48912834,48916076,48921160,48922847,48926964 48908820,48910880,48913021,48916187,48921272,48922937,48929056 Gene ID= ENSG00000159202.17 TPM= 178.17 Transcript Type= protein_coding chr17 48929316 48945117 48929316 48945117 - ENST00000502492.5@SNF8 ENST00000502492.5 protein_coding 48944681,48943925,48940924,48937020,48936170,48933205,48931643,48929316 48945117,48943975,48941062,48937124,48936242,48933346,48931717,48930612 Gene ID= ENSG00000159210.9 TPM= 84.22 Transcript Type= protein_coding chr17 48930374 48944810 48930374 48944810 - ENST00000290330.7@SNF8 ENST00000290330.7 protein_coding 48944681,48943925,48940924,48937020,48936170,48933205,48931643,48930374 48944810,48943975,48941062,48937124,48936242,48933346,48931714,48930612 Gene ID= ENSG00000159210.9 TPM= 3.62 Transcript Type= protein_coding chr17 49203100 49210538 49203100 49210538 - transcript3398.chr17.nnic@GNGT2 transcript3398.chr17.nnic protein_coding 49210400,49208845,49207339,49203100 49210538,49208954,49207444,49206882 Gene ID= ENSG00000167083.6 TPM= 1.81 Transcript Type= NA chr17 49210400 49223225 49210400 49223225 + transcript3392.chr17.nnic@ABI3 transcript3392.chr17.nnic protein_coding 49210400,49216531,49217681,49219540,49219858,49220169,49222091,49222552 49210841,49216698,49217915,49219625,49219953,49220326,49222225,49223225 Gene ID= ENSG00000108798.8 TPM= 3.62 Transcript Type= NA chr17 49210227 49223225 49210227 49223225 + ENST00000225941.5@ABI3 ENST00000225941.5 protein_coding 49210227,49216531,49217739,49219540,49219858,49220169,49222091,49222552 49210841,49216698,49217915,49219625,49219953,49220326,49222225,49223225 Gene ID= ENSG00000108798.8 TPM= 35.32 Transcript Type= protein_coding chr17 49404049 49414905 49404049 49414905 - ENST00000614445.4@PHB ENST00000614445.4 protein_coding 49414835,49414242,49413177,49411678,49409331,49409042,49406759,49404049 49414905,49414333,49413291,49411839,49409473,49409158,49406854,49405204 Gene ID= ENSG00000167085.11 TPM= 6.79 Transcript Type= protein_coding chr17 49404052 49414880 49404052 49414880 - ENST00000300408.7@PHB ENST00000300408.7 protein_coding 49414835,49413177,49411678,49409331,49409042,49406759,49404052 49414880,49413291,49411839,49409473,49409158,49406854,49405204 Gene ID= ENSG00000167085.11 TPM= 185.18 Transcript Type= protein_coding chr17 49495293 49515017 49495293 49515017 + ENST00000172229.7@NGFR ENST00000172229.7 protein_coding 49495293,49502063,49506299,49510412,49511892,49512708 49495483,49502204,49506658,49510664,49512052,49515017 Gene ID= ENSG00000064300.8 TPM= 82.4 Transcript Type= protein_coding chr17 49598886 49678163 49598886 49678163 - ENST00000347630.6@SPOP ENST00000347630.6 protein_coding 49677933,49636759,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598886 49678163,49636809,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522 Gene ID= ENSG00000121067.17 TPM= 7.06 Transcript Type= protein_coding chr17 49599285 49678040 49599285 49678040 - transcript3417.chr17.nic@SPOP transcript3417.chr17.nic protein_coding 49677933,49668027,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49599285 49678040,49668078,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522 Gene ID= ENSG00000121067.17 TPM= 7.97 Transcript Type= NA chr17 49598884 49678110 49598884 49678110 - ENST00000393328.6@SPOP ENST00000393328.6 protein_coding 49677933,49675895,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49598884 49678110,49676016,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522 Gene ID= ENSG00000121067.17 TPM= 15.21 Transcript Type= protein_coding chr17 49600006 49678234 49600006 49678234 - ENST00000504102.5@SPOP ENST00000504102.5 protein_coding 49677933,49622733,49621946,49619234,49618981,49611280,49607874,49607250,49601865,49600006 49678234,49622876,49622067,49619385,49619108,49611457,49607929,49607372,49602007,49600522 Gene ID= ENSG00000121067.17 TPM= 19.92 Transcript Type= protein_coding chr17 49700958 49707955 49700958 49707955 - transcript3424.chr17.nic@SLC35B1 transcript3424.chr17.nic protein_coding 49707730,49707343,49706965,49706204,49705866,49705124,49704100,49703188,49702858,49700958 49707955,49707444,49707068,49706334,49705896,49705281,49704226,49703294,49703011,49701510 Gene ID= ENSG00000121073.13 TPM= 1.81 Transcript Type= NA chr17 49700943 49708199 49700943 49708199 - ENST00000240333.10@SLC35B1 ENST00000240333.10 protein_coding 49707730,49706965,49706204,49705866,49705124,49704100,49703188,49702858,49700943 49708199,49707068,49706334,49705896,49705281,49704226,49703294,49703011,49701510 Gene ID= ENSG00000121073.13 TPM= 18.11 Transcript Type= protein_coding chr17 49710332 49764167 49710332 49764167 - ENST00000240364.6@FAM117A ENST00000240364.6 protein_coding 49763892,49732551,49722499,49720326,49719760,49717513,49716165,49710332 49764167,49732720,49722594,49720436,49719894,49717714,49716315,49711555 Gene ID= ENSG00000121104.7 TPM= 19.92 Transcript Type= protein_coding chr17 49788555 49835030 49788555 49835030 + ENST00000259021.8@KAT7 ENST00000259021.8 protein_coding 49788555,49791886,49796750,49798319,49805363,49809119,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401 49788849,49792033,49796926,49798558,49805445,49809208,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49835030 Gene ID= ENSG00000136504.11 TPM= 30.79 Transcript Type= protein_coding chr17 49788706 49829096 49788706 49829096 + ENST00000424009.6@KAT7 ENST00000424009.6 protein_coding 49788706,49791886,49796750,49798319,49805363,49811476,49815803,49817820,49821337,49821650,49823202,49826000,49826693,49827401 49788849,49792033,49796926,49798558,49805445,49811574,49815913,49818011,49821426,49821790,49823295,49826146,49826799,49829096 Gene ID= ENSG00000136504.11 TPM= 8.15 Transcript Type= protein_coding chr17 50056110 50090480 50056110 50090480 + ENST00000320031.12@ITGA3 ENST00000320031.12 protein_coding 50056110,50064077,50064528,50068056,50070844,50071311,50071986,50073916,50074144,50074448,50075459,50075599,50076326,50076584,50076974,50077379,50078046,50078207,50078824,50079076,50079435,50080262,50081310,50087744,50088225,50089110 50056645,50064204,50064607,50068305,50070930,50071518,50072182,50074004,50074280,50074534,50075526,50075735,50076475,50076681,50077121,50077447,50078125,50078284,50078926,50079258,50079557,50080375,50081408,50087869,50088366,50090480 Gene ID= ENSG00000005884.17 TPM= 90.55 Transcript Type= protein_coding chr17 50095275 50112152 50095275 50112152 + ENST00000503176.5@PDK2 ENST00000503176.5 protein_coding 50095275,50097423,50105371,50105885,50106794,50107076,50108156,50108319,50108612,50109287,50109957 50095553,50097564,50105442,50106069,50106883,50107153,50108232,50108417,50108719,50109400,50112152 Gene ID= ENSG00000005882.11 TPM= 406.03 Transcript Type= protein_coding chr17 50095387 50106368 50095387 50106368 + ENST00000505897.5@PDK2 ENST00000505897.5 protein_coding 50095387,50097423,50105371,50105885 50095553,50097564,50105442,50106368 Gene ID= ENSG00000005882.11 TPM= 21.73 Transcript Type= retained_intron chr17 50111312 50115694 50111312 50115694 - transcript3467.chr17.nic@SAMD14 transcript3467.chr17.nic protein_coding 50115564,50114187,50113924,50111312 50115694,50114306,50114079,50113048 Gene ID= ENSG00000167100.14 TPM= 5.43 Transcript Type= NA chr17 50133735 50150630 50133735 50150630 - ENST00000612501.1@PPP1R9B ENST00000612501.1 protein_coding 50149143,50145113,50143598,50141269,50140093,50139429,50139263,50135968,50135553,50133735 50150630,50145245,50143718,50141373,50140228,50139581,50139316,50136197,50135649,50135384 Gene ID= ENSG00000108819.10 TPM= 38.94 Transcript Type= protein_coding chr17 50166005 50175931 50166005 50175931 + ENST00000262018.7@SGCA ENST00000262018.7 protein_coding 50166005,50167368,50167582,50167947,50168374,50169092,50170143,50170640,50175257,50175712 50166077,50167487,50167736,50168019,50168572,50169254,50170351,50170666,50175449,50175931 Gene ID= ENSG00000108823.15 TPM= 1.81 Transcript Type= protein_coding chr17 50346092 50361151 50346092 50361151 + ENST00000017003.6@XYLT2 ENST00000017003.6 protein_coding 50346092,50353630,50354408,50354854,50355501,50355781,50356085,50356511,50357057,50358207,50359969 50346275,50354122,50354583,50355056,50355581,50355997,50356261,50356773,50357252,50358540,50361151 Gene ID= ENSG00000015532.9 TPM= 13.58 Transcript Type= protein_coding chr17 50367867 50373214 50367867 50373214 - ENST00000225969.8@MRPL27 ENST00000225969.8 protein_coding 50373131,50370455,50370032,50367867 50373214,50370586,50370099,50368298 Gene ID= ENSG00000108826.15 TPM= 82.4 Transcript Type= protein_coding chr17 50367868 50373207 50367868 50373207 - ENST00000442592.3@MRPL27 ENST00000442592.3 protein_coding 50373131,50370455,50367868 50373207,50370586,50370099 Gene ID= ENSG00000108826.15 TPM= 2.72 Transcript Type= protein_coding chr17 50381238 50397553 50381238 50397553 - ENST00000225972.7@LRRC59 ENST00000225972.7 protein_coding 50397213,50394929,50392739,50392398,50388060,50385118,50381238 50397553,50394988,50392897,50392502,50388132,50385291,50383235 Gene ID= ENSG00000108829.9 TPM= 201.03 Transcript Type= protein_coding chr17 50426218 50475011 50426218 50475011 + transcript3498.chr17.nic@ACSF2 transcript3498.chr17.nic protein_coding 50426218,50460677,50461242,50461633,50462184,50462420,50463156,50463395,50464218,50464526,50471028,50472428,50473665,50473894,50474199,50474502 50426389,50460872,50461370,50461686,50462302,50462585,50463251,50463552,50464294,50464599,50471135,50472579,50473806,50474004,50474267,50475011 Gene ID= ENSG00000167107.12 TPM= 15.8 Transcript Type= NA chr17 50426216 50476013 50426216 50476013 + transcript3500.chr17.nic@ACSF2 transcript3500.chr17.nic protein_coding 50426216,50460677,50461242,50461633,50462184,50462420,50463156,50463395,50463818,50464218,50471028,50472428,50473665,50473894,50474199,50474502 50426389,50460872,50461370,50461686,50462317,50462585,50463251,50463552,50463909,50464294,50471135,50472579,50473806,50474004,50474267,50476013 Gene ID= ENSG00000167107.12 TPM= 28.33 Transcript Type= NA chr17 50426158 50474835 50426158 50474835 + ENST00000300441.8@ACSF2 ENST00000300441.8 protein_coding 50426158,50460677,50461242,50461633,50462184,50462420,50463156,50463395,50463818,50464218,50471028,50472428,50473665,50473894,50474199,50474502 50426389,50460872,50461370,50461686,50462302,50462585,50463251,50463552,50463909,50464294,50471135,50472579,50473806,50474004,50474267,50474835 Gene ID= ENSG00000167107.12 TPM= 243.25 Transcript Type= protein_coding chr17 50464498 50468966 50464498 50468966 - ENST00000508540.5@CHAD ENST00000508540.5 protein_coding 50468040,50465707,50465294,50464498 50468966,50465870,50465439,50465049 Gene ID= ENSG00000136457.9 TPM= 29.88 Transcript Type= protein_coding chr17 50464499 50468906 50464499 50468906 - ENST00000258969.4@CHAD ENST00000258969.4 protein_coding 50468040,50465707,50465283,50464499 50468906,50465870,50465439,50465049 Gene ID= ENSG00000136457.9 TPM= 3.62 Transcript Type= protein_coding chr17 50478806 50485977 50478806 50485977 + transcript3513.chr17.nnic@RSAD1 transcript3513.chr17.nnic protein_coding 50478806,50479629,50479880,50482091,50482643,50483340,50483706,50484442,50484744,50485179 50479019,50479762,50480084,50482456,50482706,50483487,50483760,50484545,50484894,50485977 Gene ID= ENSG00000136444.9 TPM= 4.53 Transcript Type= NA chr17 50478800 50485975 50478800 50485975 + ENST00000258955.6@RSAD1 ENST00000258955.6 protein_coding 50478800,50479629,50479880,50482091,50482643,50483340,50483706,50484442,50484744 50479019,50479762,50480084,50482456,50482706,50483487,50483760,50484545,50485975 Gene ID= ENSG00000136444.9 TPM= 117.72 Transcript Type= protein_coding chr17 50534552 50543753 50534552 50543753 + transcript3539.chr17.nic@EPN3 transcript3539.chr17.nic protein_coding 50534552,50536029,50536421,50538079,50538884,50539187,50540247,50540793,50541229,50541464,50541844 50534652,50536199,50537118,50538197,50538964,50539315,50540334,50541062,50541333,50541694,50543753 Gene ID= ENSG00000049283.17 TPM= 6.95 Transcript Type= NA chr17 50532543 50543750 50532543 50543750 + ENST00000268933.7@EPN3 ENST00000268933.7 protein_coding 50532543,50536421,50538079,50538884,50539187,50540247,50540793,50541229,50541464,50541844 50532985,50537118,50538197,50538964,50539315,50540334,50541062,50541333,50541694,50543750 Gene ID= ENSG00000049283.17 TPM= 10.26 Transcript Type= protein_coding chr17 50532732 50543753 50532732 50543753 + transcript3544.chr17.nic@EPN3 transcript3544.chr17.nic protein_coding 50532732,50536029,50538079,50538884,50539187,50540247,50540793,50541229,50541464,50541844 50532985,50537118,50538197,50538964,50539315,50540334,50541062,50541333,50541694,50543753 Gene ID= ENSG00000049283.17 TPM= 5.13 Transcript Type= NA chr17 50534546 50543753 50534546 50543753 + transcript3547.chr17.nic@EPN3 transcript3547.chr17.nic protein_coding 50534546,50536421,50538079,50538884,50539187,50540247,50540793,50541229,50541464,50541844 50534652,50537118,50538197,50538964,50539315,50540334,50541062,50541333,50541694,50543753 Gene ID= ENSG00000049283.17 TPM= 5.13 Transcript Type= NA chr17 50532738 50542800 50532738 50542800 + transcript3549.chr17.nic@EPN3 transcript3549.chr17.nic protein_coding 50532738,50536421,50538079,50539187,50540247,50540793,50541229,50541464,50541844 50532985,50537118,50538197,50539315,50540334,50541062,50541333,50541694,50542800 Gene ID= ENSG00000049283.17 TPM= 3.47 Transcript Type= NA chr17 50534546 50542800 50534546 50542800 + transcript3550.chr17.nic@EPN3 transcript3550.chr17.nic protein_coding 50534546,50536421,50538079,50539187,50540247,50540793,50541229,50541464,50541844 50534652,50537118,50538197,50539315,50540334,50541062,50541333,50541694,50542800 Gene ID= ENSG00000049283.17 TPM= 2.56 Transcript Type= NA chr17 50547089 50555852 50547089 50555852 + ENST00000006658.10@SPATA20 ENST00000006658.10 protein_coding 50547089,50547720,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492 50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852 Gene ID= ENSG00000006282.20 TPM= 169.15 Transcript Type= protein_coding chr17 50547127 50555850 50547127 50555850 + ENST00000503127.5@SPATA20 ENST00000503127.5 protein_coding 50547127,50547665,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492 50547285,50547767,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555850 Gene ID= ENSG00000006282.20 TPM= 158.28 Transcript Type= nonsense_mediated_decay chr17 50547126 50555852 50547126 50555852 + ENST00000356488.8@SPATA20 ENST00000356488.8 protein_coding 50547126,50548283,50548554,50548810,50549043,50549286,50549985,50550208,50550536,50550708,50550998,50551511,50551969,50554251,50555232,50555492 50547285,50548453,50548618,50548964,50549186,50549487,50550115,50550312,50550610,50550917,50551190,50551679,50552180,50554450,50555312,50555852 Gene ID= ENSG00000006282.20 TPM= 26.98 Transcript Type= protein_coding chr17 50634786 50691705 50634786 50691705 + transcript3595.chr17.nic@ABCC3 transcript3595.chr17.nic protein_coding 50634786,50634922,50655832,50656702,50657046,50658082,50658435,50659237,50660923,50663681,50663950,50665153,50667554,50667863,50668430,50668853,50669140,50669352,50672971,50673469,50675362,50675631,50675883,50676278,50677744,50678093,50679798,50683610,50683949,50684709,50687536,50691092 50634810,50634981,50656008,50656827,50657183,50658207,50658496,50659368,50661114,50663858,50664111,50665245,50667757,50668009,50668517,50668919,50669266,50669528,50673138,50673658,50675476,50675775,50676090,50676588,50677943,50678219,50679899,50683756,50684107,50684875,50687730,50691705 Gene ID= ENSG00000108846.15 TPM= 50.32 Transcript Type= NA chr17 50634790 50691705 50634790 50691705 + transcript3620.chr17.nic@ABCC3 transcript3620.chr17.nic protein_coding 50634790,50655832,50656702,50657046,50658082,50658435,50659237,50663681,50663950,50665153,50667554,50667863,50668430,50668853,50669140,50669352,50672971,50673469,50675362,50675631,50675883,50676278,50677744,50678093,50679798,50683610,50683949,50684709,50687536,50691092 50634981,50656008,50656827,50657183,50658207,50658496,50659368,50663858,50664111,50665245,50667757,50668009,50668517,50668919,50669266,50669528,50673138,50673658,50675476,50675775,50676090,50676588,50677943,50678219,50679899,50683756,50684107,50684875,50687730,50691705 Gene ID= ENSG00000108846.15 TPM= 28.59 Transcript Type= NA chr17 50634790 50667930 50634790 50667930 + transcript3645.chr17.nic@ABCC3 transcript3645.chr17.nic protein_coding 50634790,50655832,50656702,50657046,50658082,50658435,50659237,50663681,50663950,50665153,50667554 50634981,50656008,50656827,50657183,50658207,50658496,50659368,50663858,50664111,50665245,50667930 Gene ID= ENSG00000108846.15 TPM= 7.24 Transcript Type= NA chr17 50634857 50667923 50634857 50667923 + ENST00000427699.5@ABCC3 ENST00000427699.5 protein_coding 50634857,50655832,50656702,50657046,50658082,50658435,50659237,50660923,50663681,50663950,50665153,50667554 50634981,50656008,50656827,50657183,50658207,50658496,50659368,50661114,50663858,50664111,50665245,50667923 Gene ID= ENSG00000108846.15 TPM= 51.62 Transcript Type= protein_coding chr17 50634901 50691702 50634901 50691702 + ENST00000505699.5@ABCC3 ENST00000505699.5 protein_coding 50634901,50655832,50656702,50657046,50658082,50658435,50659237,50660923,50663681,50663950,50665153,50667554,50667863,50668430,50668853,50669140,50669352,50672971,50673469,50675362,50675631,50675883,50676278,50677744,50679798,50683610,50683949,50684709,50687536,50691092 50634981,50656008,50656827,50657183,50658207,50658496,50659368,50661114,50663858,50664111,50665245,50667757,50668009,50668517,50668919,50669266,50669528,50673138,50673658,50675476,50675775,50676090,50676588,50678219,50679899,50683756,50684107,50684875,50687730,50691702 Gene ID= ENSG00000108846.15 TPM= 7.85 Transcript Type= nonsense_mediated_decay chr17 50693190 50707924 50693190 50707924 - ENST00000285243.6@ANKRD40 ENST00000285243.6 protein_coding 50707521,50700568,50699399,50696940,50693190 50707924,50700716,50699893,50697121,50696143 Gene ID= ENSG00000154945.6 TPM= 23.54 Transcript Type= protein_coding chr17 50719564 50752637 50719564 50752637 + transcript3660.chr17.nic@LUC7L3 transcript3660.chr17.nic protein_coding 50719564,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501,50750747,50751297,50752200 50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50750641,50750852,50751362,50752637 Gene ID= ENSG00000108848.15 TPM= 2.34 Transcript Type= NA chr17 50719564 50752639 50719564 50752639 + transcript3662.chr17.nic@LUC7L3 transcript3662.chr17.nic protein_coding 50719564,50736960,50737287,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501,50750747 50719831,50737026,50737479,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50750641,50752639 Gene ID= ENSG00000108848.15 TPM= 6.34 Transcript Type= NA chr17 50719564 50752709 50719564 50752709 + transcript3663.chr17.nic@LUC7L3 transcript3663.chr17.nic protein_coding 50719564,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501,50750747,50752200 50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50750641,50750852,50752709 Gene ID= ENSG00000108848.15 TPM= 5.96 Transcript Type= NA chr17 50719603 50752709 50719603 50752709 + ENST00000240304.5@LUC7L3 ENST00000240304.5 protein_coding 50719603,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501,50752200 50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50750694,50752709 Gene ID= ENSG00000108848.15 TPM= 15.62 Transcript Type= protein_coding chr17 50719544 50756213 50719544 50756213 + ENST00000505658.5@LUC7L3 ENST00000505658.5 protein_coding 50719544,50736960,50740306,50741102,50741657,50743706,50744652,50745720,50746542,50750501 50719831,50737026,50740345,50741246,50741731,50743810,50744813,50746003,50746702,50756213 Gene ID= ENSG00000108848.15 TPM= 21.35 Transcript Type= protein_coding chr17 50834781 50842353 50834781 50842353 + transcript3671.chr17.nnic@WFIKKN2 transcript3671.chr17.nnic protein_coding 50834781,50835748,50839499 50835032,50836147,50842353 Gene ID= ENSG00000173714.7 TPM= 2.72 Transcript Type= NA chr17 50862223 50866345 50862223 50866345 - ENST00000499247.2@TOB1 ENST00000499247.2 protein_coding 50866058,50862223 50866345,50864163 Gene ID= ENSG00000141232.4 TPM= 497.14 Transcript Type= protein_coding chr17 50962176 51120881 50962176 51120881 - transcript3676.chr17.nic@SPAG9 transcript3676.chr17.nic protein_coding 51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50975863,50974771,50970707,50962176 51120881,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50975901,50974947,50970856,50966387 Gene ID= ENSG00000008294.20 TPM= 11.77 Transcript Type= NA chr17 50962176 51046925 50962176 51046925 - transcript3684.chr17.nic@SPAG9 transcript3684.chr17.nic protein_coding 51046500,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50962176 51046925,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387 Gene ID= ENSG00000008294.20 TPM= 7.7 Transcript Type= NA chr17 50965644 51120865 50965644 51120865 - ENST00000357122.8@SPAG9 ENST00000357122.8 protein_coding 51120354,51079584,51056412,51047375,51041501,51021158,51020159,51014232,51007269,51006085,51005212,51001715,50999661,50998444,50996565,50995444,50995057,50993764,50990450,50989677,50987112,50985698,50984923,50982524,50979746,50977108,50974771,50970707,50965644 51120865,51079704,51056482,51047469,51041651,51021365,51020258,51014353,51007326,51006237,51005263,51001845,50999717,50998617,50996694,50995533,50995224,50993935,50990668,50989872,50987237,50985778,50984990,50982672,50979917,50977221,50974947,50970856,50966387 Gene ID= ENSG00000008294.20 TPM= 5.89 Transcript Type= protein_coding chr17 51153597 51162035 51153597 51162035 + ENST00000475573.5@NME1 ENST00000475573.5 protein_coding 51153597,51155651,51159980,51161098,51161728 51153662,51155780,51160081,51161272,51162035 Gene ID= ENSG00000239672.7 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr17 51153590 51171744 51153590 51171744 + ENST00000393193.6@NME1-NME2 ENST00000393193.6 protein_coding 51153590,51155651,51159980,51161160,51166827,51168242,51169937,51171487 51153662,51155780,51160081,51161272,51166956,51168343,51170049,51171744 Gene ID= ENSG00000011052.21 TPM= 11.17 Transcript Type= protein_coding chr17 51165435 51171744 51165435 51171744 + ENST00000514264.6@NME2 ENST00000514264.6 protein_coding 51165435,51166827,51168242,51169937,51171487 51165681,51166956,51168343,51170049,51171744 Gene ID= ENSG00000243678.11 TPM= 3.92 Transcript Type= protein_coding chr17 51165815 51171743 51165815 51171743 + ENST00000513177.5@NME2 ENST00000513177.5 protein_coding 51165815,51166827,51168242,51169937,51171487 51165904,51166956,51168343,51170049,51171743 Gene ID= ENSG00000243678.11 TPM= 3.02 Transcript Type= protein_coding chr17 51166564 51171744 51166564 51171744 + ENST00000393190.4@NME2 ENST00000393190.4 protein_coding 51166564,51168242,51169937,51171487 51166956,51168343,51170049,51171744 Gene ID= ENSG00000243678.11 TPM= 26.56 Transcript Type= protein_coding chr17 51166278 51171747 51166278 51171747 + ENST00000512737.5@NME2 ENST00000512737.5 protein_coding 51166278,51166827,51168242,51169937,51171487 51166497,51166956,51168343,51170049,51171747 Gene ID= ENSG00000243678.11 TPM= 219.44 Transcript Type= protein_coding chr17 51166420 51171744 51166420 51171744 + ENST00000393183.7@NME2 ENST00000393183.7 protein_coding 51166420,51166827,51168242,51171487 51166497,51166956,51168343,51171744 Gene ID= ENSG00000243678.11 TPM= 8.15 Transcript Type= protein_coding chr17 51166418 51171744 51166418 51171744 + ENST00000503064.5@NME2 ENST00000503064.5 protein_coding 51166418,51166827,51168242,51169937,51171487 51166563,51166956,51168343,51170049,51171744 Gene ID= ENSG00000243678.11 TPM= 5.73 Transcript Type= protein_coding chr17 51260528 51297933 51260528 51297933 + ENST00000225298.11@UTP18 ENST00000225298.11 protein_coding 51260528,51263274,51266182,51268837,51273362,51275866,51277130,51280005,51280389,51285245,51288029,51293903,51296965,51297782 51260926,51263386,51266280,51268904,51273450,51275991,51277304,51280105,51280479,51285368,51288203,51294045,51297003,51297933 Gene ID= ENSG00000011260.13 TPM= 39.84 Transcript Type= protein_coding chr17 54900821 54961949 54900821 54961949 + transcript3706.chr17.nnic@TOM1L1 transcript3706.chr17.nnic protein_coding 54900821,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109,54938924,54947261,54949518,54950045,54960566,54961235 54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937577,54939020,54947312,54949623,54950126,54960627,54961949 Gene ID= ENSG00000141198.15 TPM= 2.72 Transcript Type= NA chr17 54900834 54964577 54900834 54964577 + transcript3707.chr17.nic@TOM1L1 transcript3707.chr17.nic protein_coding 54900834,54903680,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109,54938924,54947261,54949518,54950045,54960566,54961235 54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54937226,54939020,54947312,54949623,54950126,54960627,54964577 Gene ID= ENSG00000141198.15 TPM= 2.72 Transcript Type= NA chr17 54900857 54938033 54900857 54938033 + ENST00000575333.5@TOM1L1 ENST00000575333.5 protein_coding 54900857,54903708,54905489,54912666,54913748,54914639,54915746,54930073,54936649,54937109 54900923,54903792,54905567,54912815,54913873,54914743,54915862,54930206,54936709,54938033 Gene ID= ENSG00000141198.15 TPM= 2.72 Transcript Type= protein_coding chr17 54951909 54968654 54951909 54968654 - ENST00000572558.5@COX11 ENST00000572558.5 protein_coding 54968281,54964697,54963306,54961119,54951909 54968654,54964852,54963431,54961312,54952112 Gene ID= ENSG00000166260.11 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr17 54962903 54968703 54962903 54968703 - ENST00000571584.1@COX11 ENST00000571584.1 protein_coding 54968281,54964697,54962903 54968703,54964852,54963431 Gene ID= ENSG00000166260.11 TPM= 7.24 Transcript Type= protein_coding chr17 55392613 55421992 55392613 55421992 - ENST00000262065.7@MMD ENST00000262065.7 protein_coding 55421670,55414151,55411257,55407746,55403767,55401469,55392613 55421992,55414232,55411417,55407820,55403868,55401538,55394534 Gene ID= ENSG00000108960.7 TPM= 17.21 Transcript Type= protein_coding chr17 55750979 55777374 55750979 55777374 + ENST00000268896.9@PCTP ENST00000268896.9 protein_coding 55750979,55767335,55771106,55773724,55774792,55776035 55751244,55767452,55771185,55773895,55774859,55777374 Gene ID= ENSG00000141179.13 TPM= 21.73 Transcript Type= protein_coding chr17 56834099 56869567 56834099 56869567 + ENST00000284061.7@DGKE ENST00000284061.7 protein_coding 56834099,56834778,56844019,56845690,56847922,56848696,56849181,56856512,56858594,56861791,56862140,56862612 56834260,56835259,56844178,56845809,56848065,56848853,56849232,56856625,56858665,56861918,56862251,56869567 Gene ID= ENSG00000153933.9 TPM= 1.81 Transcript Type= protein_coding chr17 56887909 56914038 56887909 56914038 - ENST00000316881.8@TRIM25 ENST00000316881.8 protein_coding 56913392,56908468,56904255,56901419,56899115,56895926,56895521,56895343,56887909 56914038,56908563,56904488,56901578,56899180,56895952,56895604,56895441,56892229 Gene ID= ENSG00000121060.16 TPM= 10.87 Transcript Type= protein_coding chr17 56938187 56961054 56938187 56961054 - ENST00000240316.4@COIL ENST00000240316.4 protein_coding 56960775,56949889,56949681,56949387,56946442,56942035,56938187 56961054,56950996,56949767,56949434,56946511,56942123,56939154 Gene ID= ENSG00000121058.4 TPM= 38.94 Transcript Type= protein_coding chr17 56938202 56961049 56938202 56961049 - transcript3741.chr17.nic@COIL transcript3741.chr17.nic protein_coding 56960775,56949387,56946442,56942035,56938202 56961049,56950996,56946511,56942123,56939154 Gene ID= ENSG00000121058.4 TPM= 1.81 Transcript Type= NA chr17 56978076 57006766 56978076 57006766 + transcript3749.chr17.nic@SCPEP1 transcript3749.chr17.nic protein_coding 56978076,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,56997968,57000855,57002018,57006173 56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006766 Gene ID= ENSG00000121064.12 TPM= 18.13 Transcript Type= NA chr17 56978076 57006766 56978076 57006766 + transcript3753.chr17.nic@SCPEP1 transcript3753.chr17.nic protein_coding 56978076,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,57000855,57002018,57006173 56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,57000992,57002181,57006766 Gene ID= ENSG00000121064.12 TPM= 14.81 Transcript Type= NA chr17 56978076 57006766 56978076 57006766 + transcript3754.chr17.nic@SCPEP1 transcript3754.chr17.nic protein_coding 56978076,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,57000855,57002018,57006173 56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56998498,57000992,57002181,57006766 Gene ID= ENSG00000121064.12 TPM= 12.02 Transcript Type= NA chr17 56978105 57006763 56978105 57006763 + ENST00000262288.7@SCPEP1 ENST00000262288.7 protein_coding 56978105,56981082,56985378,56987695,56988216,56991099,56994981,56995507,56996962,56998385,57000855,57002018,57006173 56978235,56981230,56985467,56987850,56988290,56991171,56995018,56995635,56997055,56998498,57000992,57002181,57006763 Gene ID= ENSG00000121064.12 TPM= 393.02 Transcript Type= protein_coding chr17 57071632 57085009 57071632 57085009 - transcript3761.chr17.nnic@AC007114.1 transcript3761.chr17.nnic lincRNA 57084840,57079287,57071632 57085009,57079410,57072498 Gene ID= ENSG00000263004.1 TPM= 1.81 Transcript Type= NA chr17 57085725 57121348 57085725 57121348 + transcript3766.chr17.nic@AKAP1 transcript3766.chr17.nic protein_coding 57085725,57086373,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250 57086074,57086537,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121348 Gene ID= ENSG00000121057.12 TPM= 5.43 Transcript Type= NA chr17 57085097 57121348 57085097 57121348 + transcript3769.chr17.nic@AKAP1 transcript3769.chr17.nic protein_coding 57085097,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250 57085158,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121348 Gene ID= ENSG00000121057.12 TPM= 3.62 Transcript Type= NA chr17 57085190 57121349 57085190 57121349 + ENST00000337714.7@AKAP1 ENST00000337714.7 protein_coding 57085190,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250 57085398,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121349 Gene ID= ENSG00000121057.12 TPM= 43.47 Transcript Type= protein_coding chr17 57085677 57121348 57085677 57121348 + transcript3772.chr17.nic@AKAP1 transcript3772.chr17.nic protein_coding 57085677,57105441,57110025,57111798,57112491,57114459,57116111,57116860,57118381,57118982,57120250 57086074,57107178,57110158,57111924,57112618,57114636,57116261,57116927,57118454,57119044,57121348 Gene ID= ENSG00000121057.12 TPM= 3.62 Transcript Type= NA chr17 57861596 57955273 57861596 57955273 - transcript3788.chr17.nic@CUEDC1 transcript3788.chr17.nic protein_coding 57955225,57885646,57885229,57879611,57873591,57872663,57871286,57869122,57868150,57867357,57866474,57861596 57955273,57885879,57885441,57879738,57873717,57872855,57871369,57869193,57868243,57867415,57866544,57863285 Gene ID= ENSG00000180891.12 TPM= 5.16 Transcript Type= NA chr17 57861596 57955418 57861596 57955418 - transcript3803.chr17.nic@CUEDC1 transcript3803.chr17.nic protein_coding 57955225,57885229,57879611,57873591,57872663,57871286,57869122,57866474,57861596 57955418,57885879,57879738,57873717,57872855,57871369,57869193,57868243,57863285 Gene ID= ENSG00000180891.12 TPM= 11.05 Transcript Type= NA chr17 57861243 57955323 57861243 57955323 - ENST00000577830.5@CUEDC1 ENST00000577830.5 protein_coding 57955225,57885229,57879611,57873591,57872663,57871286,57869122,57868150,57867357,57866474,57861243 57955323,57885879,57879738,57873717,57872855,57871369,57869193,57868243,57867415,57866544,57863285 Gene ID= ENSG00000180891.12 TPM= 70.36 Transcript Type= protein_coding chr17 57971549 57988251 57971549 57988251 - transcript3809.chr17.nnic@VEZF1 transcript3809.chr17.nnic protein_coding 57988079,57982699,57981873,57980603,57979845,57979152,57971549 57988251,57983393,57981936,57980786,57979967,57979313,57974900 Gene ID= ENSG00000136451.8 TPM= 3.62 Transcript Type= NA chr17 57971549 57988219 57971549 57988219 - transcript3810.chr17.nnic@VEZF1 transcript3810.chr17.nnic protein_coding 57988079,57985254,57982699,57981873,57980603,57979152,57971549 57988219,57985465,57983393,57981936,57980786,57979313,57974900 Gene ID= ENSG00000136451.8 TPM= 2.72 Transcript Type= NA chr17 57971549 57988424 57971549 57988424 - transcript3813.chr17.nic@VEZF1 transcript3813.chr17.nic protein_coding 57988079,57982699,57981873,57980603,57979152,57971549 57988424,57983393,57981936,57980804,57979313,57974900 Gene ID= ENSG00000136451.8 TPM= 9.06 Transcript Type= NA chr17 58001085 58007279 58001085 58007279 - transcript3817.chr17.nic@SRSF1 transcript3817.chr17.nic protein_coding 58006944,58006343,58005801,58004923,58001085 58007279,58006527,58005973,58005600,58004001 Gene ID= ENSG00000136450.12 TPM= 15.39 Transcript Type= NA chr17 58083415 58095536 58083415 58095536 + ENST00000579991.2@DYNLL2 ENST00000579991.2 protein_coding 58083415,58087082,58089142 58083683,58087222,58095536 Gene ID= ENSG00000264364.2 TPM= 21.73 Transcript Type= protein_coding chr17 58205436 58219251 58205436 58219251 - transcript3831.chr17.nic@MKS1 transcript3831.chr17.nic protein_coding 58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205436 58219251,58218729,58216736,58216243,58214838,58214387,58213869,58213090,58212434,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170 Gene ID= ENSG00000011143.16 TPM= 2.72 Transcript Type= NA chr17 58205436 58219249 58205436 58219249 - transcript3832.chr17.nic@MKS1 transcript3832.chr17.nic protein_coding 58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58212378,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205436 58219249,58218729,58216736,58216243,58214838,58214387,58213869,58213090,58212434,58211022,58208583,58208174,58208001,58207218,58206547,58206380,58206170 Gene ID= ENSG00000011143.16 TPM= 2.26 Transcript Type= NA chr17 58205437 58219305 58205437 58219305 - ENST00000393119.6@MKS1 ENST00000393119.6 protein_coding 58219151,58218620,58216666,58216088,58214741,58214259,58213765,58212982,58212378,58210980,58210659,58208513,58208105,58207894,58207085,58206465,58206283,58205437 58219305,58218729,58216736,58216243,58214838,58214387,58213869,58213090,58212434,58211022,58210724,58208583,58208174,58208001,58207218,58206547,58206380,58206170 Gene ID= ENSG00000011143.16 TPM= 38.49 Transcript Type= protein_coding chr17 58269856 58280935 58269856 58280935 - ENST00000225275.3@MPO ENST00000225275.3 protein_coding 58280605,58280366,58279839,58279523,58279297,58279008,58277827,58275542,58273414,58272748,58271655,58269856 58280935,58280459,58280014,58279646,58279426,58279214,58278145,58275702,58273669,58272918,58271892,58270863 Gene ID= ENSG00000005381.7 TPM= 2.72 Transcript Type= protein_coding chr17 58324472 58353285 58324472 58353285 + transcript3855.chr17.nnic@TSPOAP1-AS1 transcript3855.chr17.nnic antisense_RNA 58324472,58337448,58351735,58351999 58324627,58337679,58351914,58353285 Gene ID= ENSG00000265148.5 TPM= 2.72 Transcript Type= NA chr17 58345175 58352167 58345175 58352167 - ENST00000581166.5@SUPT4H1 ENST00000581166.5 protein_coding 58352067,58351402,58347188,58345175 58352167,58351508,58347241,58346313 Gene ID= ENSG00000213246.6 TPM= 9.96 Transcript Type= nonsense_mediated_decay chr17 58489531 58514629 58489531 58514629 - transcript3864.chr17.nic@MTMR4 transcript3864.chr17.nic protein_coding 58514363,58512852,58512390,58511429,58508681,58508468,58508161,58507123,58506743,58505472,58504779,58504303,58504050,58503744,58494932,58492842,58492511,58489531 58514629,58512941,58512506,58511511,58508841,58508564,58508274,58507319,58506871,58505583,58504974,58504488,58504220,58503898,58496330,58492952,58492599,58491840 Gene ID= ENSG00000108389.9 TPM= 12.22 Transcript Type= NA chr17 58489537 58517905 58489537 58517905 - ENST00000323456.9@MTMR4 ENST00000323456.9 protein_coding 58517817,58516580,58512852,58512390,58511429,58508681,58508468,58508161,58507123,58506743,58505472,58504779,58504303,58504050,58503744,58494932,58492842,58492511,58489537 58517905,58516618,58512941,58512506,58511511,58508841,58508564,58508274,58507319,58506871,58505583,58504974,58504488,58504220,58503898,58496330,58492952,58492599,58491840 Gene ID= ENSG00000108389.9 TPM= 9.51 Transcript Type= protein_coding chr17 58520250 58532107 58520250 58532107 - transcript3867.chr17.nic@SEPT4 transcript3867.chr17.nic protein_coding 58531961,58531480,58526682,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520250 58532107,58531551,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485 Gene ID= ENSG00000108387.14 TPM= 32.96 Transcript Type= NA chr17 58520255 58532093 58520255 58532093 - transcript3877.chr17.nic@SEPT4 transcript3877.chr17.nic protein_coding 58531961,58526932,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520255 58532093,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485 Gene ID= ENSG00000108387.14 TPM= 13.04 Transcript Type= NA chr17 58520254 58532107 58520254 58532107 - transcript3878.chr17.nic@SEPT4 transcript3878.chr17.nic protein_coding 58531961,58531480,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520254 58532107,58531551,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485 Gene ID= ENSG00000108387.14 TPM= 26.62 Transcript Type= NA chr17 58520255 58532085 58520255 58532085 - transcript3881.chr17.nic@SEPT4 transcript3881.chr17.nic protein_coding 58531961,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520255 58532085,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485 Gene ID= ENSG00000108387.14 TPM= 43.83 Transcript Type= NA chr17 58520256 58529351 58520256 58529351 - ENST00000317268.7@SEPT4 ENST00000317268.7 protein_coding 58529115,58526682,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520256 58529351,58526978,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485 Gene ID= ENSG00000108387.14 TPM= 24.81 Transcript Type= protein_coding chr17 58520299 58529303 58520299 58529303 - ENST00000580844.5@SEPT4 ENST00000580844.5 protein_coding 58529115,58526220,58525695,58525078,58521967,58521736,58521545,58521254,58520998,58520743,58520299 58529303,58526313,58525781,58525201,58522101,58521853,58521646,58521350,58521160,58520842,58520485 Gene ID= ENSG00000108387.14 TPM= 9.06 Transcript Type= protein_coding chr17 58692573 58735611 58692573 58735611 + ENST00000337432.8@RAD51C ENST00000337432.8 protein_coding 58692573,58694931,58696693,58703196,58709859,58720746,58724040,58732484,58734118 58692788,58695189,58696859,58703329,58709990,58720812,58724100,58732544,58735611 Gene ID= ENSG00000108384.14 TPM= 2.72 Transcript Type= protein_coding chr17 58692628 58695336 58692628 58695336 + ENST00000421782.3@RAD51C ENST00000421782.3 protein_coding 58692628,58694931 58692788,58695336 Gene ID= ENSG00000108384.14 TPM= 9.96 Transcript Type= protein_coding chr17 58755869 58985176 58755869 58985176 + ENST00000308249.3@PPM1E ENST00000308249.3 protein_coding 58755869,58955649,58965694,58969539,58972132,58972832,58979974 58756461,58955767,58965893,58969727,58972275,58972925,58985176 Gene ID= ENSG00000175175.5 TPM= 3.62 Transcript Type= protein_coding chr17 58998203 59106749 58998203 59106749 - transcript3905.chr17.nic@TRIM37 transcript3905.chr17.nic protein_coding 59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998203 59106749,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001741,58999459 Gene ID= ENSG00000108395.13 TPM= 2.72 Transcript Type= NA chr17 58998203 59106761 58998203 59106761 - transcript3908.chr17.nic@TRIM37 transcript3908.chr17.nic protein_coding 59106441,59104293,59091300,59088291,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998203 59106761,59104394,59091340,59088407,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459 Gene ID= ENSG00000108395.13 TPM= 1.81 Transcript Type= NA chr17 58998203 59106892 58998203 59106892 - transcript3909.chr17.nnic@TRIM37 transcript3909.chr17.nnic protein_coding 59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998203 59106892,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459 Gene ID= ENSG00000108395.13 TPM= 1.81 Transcript Type= NA chr17 58998206 59106751 58998206 59106751 - transcript3911.chr17.nic@TRIM37 transcript3911.chr17.nic protein_coding 59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,58998206 59106751,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,58999459 Gene ID= ENSG00000108395.13 TPM= 2.72 Transcript Type= NA chr17 58998202 59106721 58998202 59106721 - ENST00000262294.11@TRIM37 ENST00000262294.11 protein_coding 59106441,59104293,59091300,59088291,59084002,59081097,59079754,59075647,59070823,59064355,59062567,59061032,59056875,59051214,59049178,59047683,59041813,59031896,59028415,59017296,59015610,59012328,59001598,58998202 59106721,59104394,59091340,59088407,59084089,59081219,59079877,59075714,59070947,59064405,59062648,59061108,59057054,59051328,59049393,59047819,59041898,59032090,59028723,59017424,59015799,59012446,59001714,58999459 Gene ID= ENSG00000108395.13 TPM= 13.58 Transcript Type= protein_coding chr17 59109951 59155269 59109951 59155269 - ENST00000330137.11@SKA2 ENST00000330137.11 protein_coding 59155131,59131281,59119319,59109951 59155269,59131367,59119495,59112345 Gene ID= ENSG00000182628.12 TPM= 4.53 Transcript Type= protein_coding chr17 59210024 59215247 59210024 59215247 + transcript3922.chr17.nnic@SMG8 transcript3922.chr17.nnic protein_coding 59210024,59212341,59212729,59213513,59214805 59211810,59212486,59213421,59213601,59215247 Gene ID= ENSG00000167447.12 TPM= 4.07 Transcript Type= NA chr17 59210010 59215247 59210010 59215247 + ENST00000300917.9@SMG8 ENST00000300917.9 protein_coding 59210010,59212341,59212729,59214805 59211810,59212486,59213601,59215247 Gene ID= ENSG00000167447.12 TPM= 42.11 Transcript Type= protein_coding chr17 59331702 59401729 59331702 59401729 + ENST00000312655.8@YPEL2 ENST00000312655.8 protein_coding 59331702,59353215,59388327,59389360,59397101 59331824,59353526,59388370,59389468,59401729 Gene ID= ENSG00000175155.8 TPM= 13.58 Transcript Type= protein_coding chr17 59619858 59696310 59619858 59696310 + ENST00000269122.7@CLTC ENST00000269122.7 protein_coding 59619858,59644276,59647398,59648240,59651203,59655854,59660391,59661443,59663842,59664787,59666103,59666480,59666797,59668777,59673647,59674701,59676954,59679397,59680912,59681295,59681647,59682271,59682629,59682907,59683095,59683387,59683625,59683875,59685056,59685587,59690636,59693728 59620173,59644483,59647666,59648401,59651316,59656027,59660588,59661643,59663994,59664909,59666240,59666644,59666977,59668940,59673772,59674843,59677188,59679519,59681057,59681478,59681839,59682428,59682793,59683014,59683262,59683536,59683756,59683985,59685226,59685808,59690711,59696310 Gene ID= ENSG00000141367.11 TPM= 225.78 Transcript Type= protein_coding chr17 59619858 59690826 59619858 59690826 + ENST00000393043.5@CLTC ENST00000393043.5 protein_coding 59619858,59644276,59647398,59648240,59651203,59655854,59660391,59661443,59663842,59664787,59666103,59666480,59666797,59668777,59673647,59674701,59676954,59679397,59680912,59681295,59681647,59682271,59682629,59682907,59683095,59683387,59683625,59683875,59685056,59685587,59690636 59620173,59644483,59647666,59648401,59651316,59656027,59660588,59661643,59663994,59664909,59666240,59666644,59666977,59668940,59673772,59674843,59677188,59679519,59681057,59681478,59681839,59682428,59682793,59683014,59683262,59683536,59683756,59683985,59685226,59685808,59690826 Gene ID= ENSG00000141367.11 TPM= 3.02 Transcript Type= protein_coding chr17 59697308 59707626 59697308 59707626 - ENST00000409433.2@PTRH2 ENST00000409433.2 protein_coding 59707371,59698871,59697308 59707626,59700189,59697978 Gene ID= ENSG00000141378.14 TPM= 1.81 Transcript Type= protein_coding chr17 59697306 59707598 59697306 59707598 - ENST00000393038.2@PTRH2 ENST00000393038.2 protein_coding 59707371,59697306 59707598,59697978 Gene ID= ENSG00000141378.14 TPM= 29.88 Transcript Type= protein_coding chr17 59707648 59841246 59707648 59841246 + transcript3941.chr17.nic@VMP1 transcript3941.chr17.nic protein_coding 59707648,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59834012,59838295,59839768 59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59834050,59838397,59841246 Gene ID= ENSG00000062716.12 TPM= 17.62 Transcript Type= NA chr17 59707465 59841092 59707465 59841092 + ENST00000262291.8@VMP1 ENST00000262291.8 protein_coding 59707465,59731421,59735338,59737453,59738837,59764971,59773754,59808796,59811670,59817712,59838295,59839768 59707748,59731522,59735473,59737543,59738947,59765138,59773885,59808876,59811786,59817773,59838397,59841092 Gene ID= ENSG00000062716.12 TPM= 146.81 Transcript Type= protein_coding chr17 59859475 59892933 59859475 59892933 - transcript3964.chr17.nic@TUBD1 transcript3964.chr17.nic protein_coding 59892697,59886083,59880894,59878103,59874539,59866609,59863664,59859475 59892933,59886230,59881110,59878334,59874703,59866749,59863847,59860424 Gene ID= ENSG00000108423.14 TPM= 1.81 Transcript Type= NA chr17 59893116 59950424 59893116 59950424 + transcript3968.chr17.nic@RPS6KB1 transcript3968.chr17.nic protein_coding 59893116,59910562,59912684,59914635,59926435,59930117,59930358,59931622,59934170,59934434,59935193,59936215,59936464,59940836,59945406,59946551 59893325,59910611,59912804,59914703,59926582,59930174,59930432,59931722,59934260,59934524,59935300,59936277,59936541,59940943,59945518,59950424 Gene ID= ENSG00000108443.13 TPM= 4.53 Transcript Type= NA chr17 59952240 59964719 59952240 59964719 - ENST00000305783.12@RNFT1 ENST00000305783.12 protein_coding 59964608,59962827,59962540,59960068,59958291,59957224,59956488,59954045,59952240 59964719,59963284,59962616,59960168,59958444,59957382,59956553,59954146,59953111 Gene ID= ENSG00000189050.15 TPM= 20.37 Transcript Type= protein_coding chr17 59952362 59964734 59952362 59964734 - ENST00000482446.5@RNFT1 ENST00000482446.5 protein_coding 59964608,59962827,59962540,59958291,59957224,59956488,59954045,59952362 59964734,59963284,59962616,59958444,59957382,59956553,59954146,59953111 Gene ID= ENSG00000189050.15 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr17 59952396 59964761 59952396 59964761 - ENST00000466544.5@RNFT1 ENST00000466544.5 protein_coding 59964608,59962827,59958291,59957224,59956488,59954045,59952396 59964761,59963284,59958444,59957382,59956553,59954146,59953111 Gene ID= ENSG00000189050.15 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr17 59964832 59973104 59964832 59973104 + ENST00000593015.5@AC005702.1 ENST00000593015.5 lincRNA 59964832,59966403,59972835 59965188,59966467,59973104 Gene ID= ENSG00000267302.5 TPM= 2.72 Transcript Type= lincRNA chr17 60043194 60078931 60043194 60078931 - ENST00000184956.10@HEATR6 ENST00000184956.10 protein_coding 60078696,60076130,60073746,60073164,60072215,60070706,60069711,60067434,60066209,60059890,60059422,60057048,60056115,60055515,60050843,60049580,60048264,60047309,60046025,60043194 60078931,60076237,60073886,60073279,60072329,60070807,60069848,60067732,60066386,60060096,60059521,60057403,60056237,60055601,60050977,60049702,60048388,60047405,60046229,60044134 Gene ID= ENSG00000068097.14 TPM= 12.68 Transcript Type= protein_coding chr17 60083572 60088467 60083572 60088467 - ENST00000587298.1@WFDC21P ENST00000587298.1 processed_transcript 60088197,60085103,60083572 60088467,60085203,60083766 Gene ID= ENSG00000261040.6 TPM= 6.34 Transcript Type= lincRNA chr17 60149936 60159540 60149936 60159540 + ENST00000300900.8@CA4 ENST00000300900.8 protein_coding 60149936,60155314,60156560,60157427,60157690,60158061,60158283,60159230 60150092,60155367,60156715,60157572,60157788,60158127,60158446,60159540 Gene ID= ENSG00000167434.9 TPM= 2.72 Transcript Type= protein_coding chr17 60177193 60392143 60177193 60392143 - transcript3986.chr17.nic@USP32 transcript3986.chr17.nic protein_coding 60391882,60345481,60301599,60294683,60288523,60271350,60269450,60265976,60265412,60255175,60252381,60236138,60226039,60223411,60222409,60219628,60214620,60213581,60212024,60211376,60211013,60209370,60208654,60208059,60207021,60205447,60198260,60192844,60190563,60185460,60183165,60181324,60180545,60177193 60392143,60345608,60301704,60294801,60288682,60271481,60269557,60266091,60265474,60255258,60252442,60236240,60226231,60223586,60222549,60219787,60214774,60213662,60212098,60211514,60211118,60209543,60208828,60208210,60207132,60205658,60198444,60192930,60190683,60185651,60183453,60181748,60180637,60179428 Gene ID= ENSG00000170832.12 TPM= 12.68 Transcript Type= NA chr17 60179094 60392134 60179094 60392134 - ENST00000300896.8@USP32 ENST00000300896.8 protein_coding 60391882,60345481,60301599,60294683,60288523,60271350,60269450,60265976,60265412,60255175,60252381,60236138,60226039,60223411,60222409,60219670,60214620,60213581,60212024,60211376,60211013,60209370,60208654,60208059,60207021,60205447,60198260,60192844,60190563,60185460,60183165,60181324,60180545,60179094 60392134,60345608,60301704,60294801,60288682,60271481,60269557,60266091,60265474,60255258,60252442,60236240,60226231,60223586,60222549,60219787,60214774,60213662,60212098,60211514,60211118,60209543,60208828,60208210,60207132,60205658,60198444,60192930,60190683,60185651,60183453,60181748,60180637,60179428 Gene ID= ENSG00000170832.12 TPM= 7.24 Transcript Type= protein_coding chr17 60445468 60526194 60445468 60526194 - transcript3993.chr17.nnic@APPBP2 transcript3993.chr17.nnic protein_coding 60525794,60514346,60500399,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60445468 60526194,60514438,60500487,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834 Gene ID= ENSG00000062725.9 TPM= 1.81 Transcript Type= NA chr17 60443149 60526219 60443149 60526219 - ENST00000083182.7@APPBP2 ENST00000083182.7 protein_coding 60525794,60500399,60494466,60479148,60466291,60464021,60461994,60461810,60460663,60456296,60454302,60451880,60443149 60526219,60500487,60494617,60479271,60466459,60464110,60462061,60461915,60460787,60456381,60454492,60452045,60447834 Gene ID= ENSG00000062725.9 TPM= 62.48 Transcript Type= protein_coding chr17 60600183 60666280 60600183 60666280 + ENST00000305921.7@PPM1D ENST00000305921.7 protein_coding 60600183,60623521,60633853,60647892,60656599,60662995 60600886,60623749,60633977,60648082,60656841,60666280 Gene ID= ENSG00000170836.11 TPM= 26.26 Transcript Type= protein_coding chr17 60600351 60663936 60600351 60663936 + transcript4004.chr17.nnic@PPM1D transcript4004.chr17.nnic protein_coding 60600351,60623521,60647892,60656599,60662995 60600886,60623749,60648082,60656841,60663936 Gene ID= ENSG00000170836.11 TPM= 1.81 Transcript Type= NA chr17 60677811 61084567 60677811 61084567 + transcript4005.chr17.nic@BCAS3 transcript4005.chr17.nic protein_coding 60677811,60679453,60683982,60689686,60709219,60747198,60808004,60868576,60874662,60889695,60902620,60910532,60924407,60947219,60989971,61015751,61034666,61037889,61040792,61074920,61078333,61084467 60677914,60679540,60684036,60689761,60709325,60747279,60808076,60868683,60874738,60889771,60902703,60910702,60924500,60947352,60990235,61015901,61034790,61038054,61040892,61075020,61078529,61084567 Gene ID= ENSG00000141376.22 TPM= 21.73 Transcript Type= NA chr17 60887026 61084567 60887026 61084567 + transcript4011.chr17.nic@BCAS3 transcript4011.chr17.nic protein_coding 60887026,60889695,60902620,60910532,60924407,60947219,60989971,61015751,61034666,61037889,61040792,61074920,61078333,61084467 60887211,60889771,60902703,60910702,60924500,60947352,60990235,61015901,61034790,61038054,61040892,61075020,61078529,61084567 Gene ID= ENSG00000141376.22 TPM= 4.53 Transcript Type= NA chr17 60677852 61392831 60677852 61392831 + ENST00000589222.5@BCAS3 ENST00000589222.5 protein_coding 60677852,60679453,60683982,60689686,60709219,60747198,60808004,60868576,60874662,60889695,60902620,60910532,60924407,60947219,60989971,61015751,61034666,61037889,61040792,61074920,61078333,61084467,61368327,61380506,61388618,61391977 60677914,60679540,60684036,60689761,60709325,60747279,60808076,60868683,60874738,60889771,60902703,60910702,60924500,60947352,60990235,61015901,61034790,61038054,61040892,61075020,61078529,61084564,61368494,61380571,61388708,61392831 Gene ID= ENSG00000141376.22 TPM= 5.43 Transcript Type= protein_coding chr17 61942558 61982358 61942558 61982358 - transcript4020.chr17.nic@MED13 transcript4020.chr17.nic protein_coding 61982198,61972727,61968035,61966462,61965006,61962752,61961588,61960867,61956339,61955680,61955382,61952965,61950825,61946917,61942558 61982358,61972888,61968258,61966651,61965468,61962971,61961779,61961090,61956481,61955838,61955567,61953113,61950998,61947017,61946600 Gene ID= ENSG00000108510.9 TPM= 7.24 Transcript Type= NA chr17 62423867 62450093 62423867 62450093 + ENST00000311506.9@METTL2A ENST00000311506.9 protein_coding 62423867,62424219,62426299,62427788,62435232,62440617,62444837,62447701,62448575 62424012,62424310,62426654,62427837,62435292,62440756,62444943,62447766,62450093 Gene ID= ENSG00000087995.15 TPM= 10.87 Transcript Type= protein_coding chr17 62423875 62448914 62423875 62448914 + ENST00000333483.14@METTL2A ENST00000333483.14 protein_coding 62423875,62426299,62427788,62435232,62440617,62444837,62447701,62448575 62424310,62426654,62427837,62435292,62440756,62444943,62447766,62448914 Gene ID= ENSG00000087995.15 TPM= 3.62 Transcript Type= retained_intron chr17 62479025 62613490 62479025 62613490 + ENST00000346027.9@TLK2 ENST00000346027.9 protein_coding 62479025,62481121,62520773,62522204,62523134,62524236,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392 62479290,62481206,62520844,62522273,62523177,62524331,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613490 Gene ID= ENSG00000146872.17 TPM= 1.81 Transcript Type= protein_coding chr17 62479150 62613489 62479150 62613489 + ENST00000343388.11@TLK2 ENST00000343388.11 protein_coding 62479150,62481121,62520773,62522204,62523134,62536170,62552302,62553663,62560016,62565001,62573215,62576709,62578477,62580111,62586135,62596585,62600651,62602042,62606130,62608041,62612392 62479290,62481206,62520844,62522273,62523177,62536337,62552397,62553755,62560126,62565137,62573367,62576775,62578574,62580192,62586226,62596674,62600820,62602180,62606241,62608148,62613489 Gene ID= ENSG00000146872.17 TPM= 1.81 Transcript Type= protein_coding chr17 62627401 62693597 62627401 62693597 + ENST00000303375.9@MRC2 ENST00000303375.9 protein_coding 62627401,62664548,62666094,62666455,62666757,62667390,62671649,62671998,62674063,62675790,62676383,62677269,62678504,62679800,62680170,62680418,62680800,62681062,62681837,62682235,62688289,62688501,62688852,62689522,62689894,62690156,62690642,62690949,62692112,62692231 62627920,62664949,62666267,62666619,62666870,62667533,62671837,62672152,62674170,62675905,62676531,62677486,62678646,62679902,62680308,62680453,62680960,62681129,62681937,62682377,62688403,62688664,62688960,62689760,62690062,62690305,62690761,62691128,62692138,62693597 Gene ID= ENSG00000011028.13 TPM= 41.66 Transcript Type= protein_coding chr17 63432305 63446135 63432305 63446135 - transcript4048.chr17.nnic@CYB561 transcript4048.chr17.nnic protein_coding 63445898,63437346,63436054,63435688,63435159,63432305 63446135,63437560,63436152,63435791,63435243,63434515 Gene ID= ENSG00000008283.15 TPM= 7.33 Transcript Type= NA chr17 63432305 63446342 63432305 63446342 - transcript4049.chr17.nnic@CYB561 transcript4049.chr17.nnic protein_coding 63446245,63437346,63436054,63435688,63435159,63432305 63446342,63437560,63436152,63435791,63435243,63434515 Gene ID= ENSG00000008283.15 TPM= 10.05 Transcript Type= NA chr17 63432307 63446184 63432307 63446184 - ENST00000392976.5@CYB561 ENST00000392976.5 protein_coding 63445898,63437346,63436054,63435688,63435086,63432307 63446184,63437560,63436152,63435791,63435243,63434594 Gene ID= ENSG00000008283.15 TPM= 28.01 Transcript Type= protein_coding chr17 63432304 63446378 63432304 63446378 - ENST00000360793.7@CYB561 ENST00000360793.7 protein_coding 63446245,63437346,63436054,63435688,63435086,63432304 63446378,63437560,63436152,63435791,63435243,63434594 Gene ID= ENSG00000008283.15 TPM= 102.72 Transcript Type= protein_coding chr17 63432304 63440866 63432304 63440866 - ENST00000392975.6@CYB561 ENST00000392975.6 protein_coding 63440727,63437346,63436054,63435688,63435086,63432304 63440866,63437560,63436152,63435791,63435243,63434594 Gene ID= ENSG00000008283.15 TPM= 12.16 Transcript Type= protein_coding chr17 63477071 63498380 63477071 63498380 + ENST00000290866.9@ACE ENST00000290866.9 protein_coding 63477071,63477931,63479007,63479769,63480337,63481091,63481566,63482466,63483029,63483460,63483849,63484330,63485236,63486557,63486986,63488648,63488941,63490954,63491209,63493436,63493922,63494372,63496394,63496798,63497137 63477343,63478098,63479100,63479912,63480528,63481188,63481738,63482689,63483173,63483558,63483971,63484541,63485372,63486715,63487073,63488791,63489132,63491051,63491381,63493659,63494066,63494470,63496516,63496985,63498380 Gene ID= ENSG00000159640.15 TPM= 17.21 Transcript Type= protein_coding chr17 63550461 63594266 63550461 63594266 + ENST00000614556.4@DCAF7 ENST00000614556.4 protein_coding 63550461,63578470,63579337,63579825,63583502,63585211,63589000 63550815,63578628,63579448,63579943,63583711,63585328,63594266 Gene ID= ENSG00000136485.14 TPM= 25.36 Transcript Type= protein_coding chr17 63550482 63594266 63550482 63594266 + ENST00000431926.5@DCAF7 ENST00000431926.5 protein_coding 63550482,63578470,63579337,63579825,63583502,63585211,63589000,63594203 63550815,63578628,63579448,63579943,63583711,63585328,63589237,63594266 Gene ID= ENSG00000136485.14 TPM= 18.11 Transcript Type= nonsense_mediated_decay chr17 63600872 63608365 63600872 63608365 + ENST00000258975.6@TACO1 ENST00000258975.6 protein_coding 63600872,63604534,63606313,63607287,63607802 63601363,63604640,63606440,63607464,63608365 Gene ID= ENSG00000136463.7 TPM= 55.24 Transcript Type= protein_coding chr17 63600870 63608367 63600870 63608367 + transcript4066.chr17.nic@TACO1 transcript4066.chr17.nic protein_coding 63600870,63604534,63607802 63601363,63607464,63608367 Gene ID= ENSG00000136463.7 TPM= 1.81 Transcript Type= NA chr17 63622378 63696309 63622378 63696309 + transcript4075.chr17.nnic@MAP3K3 transcript4075.chr17.nnic protein_coding 63622378,63632681,63634709,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63693549 63622763,63632802,63634801,63646074,63652656,63657907,63667060,63681899,63685578,63688594,63688881,63689735,63690412,63691233,63691862,63696309 Gene ID= ENSG00000198909.7 TPM= 4.07 Transcript Type= NA chr17 63622442 63696303 63622442 63696303 + ENST00000361357.7@MAP3K3 ENST00000361357.7 protein_coding 63622442,63632681,63634709,63646034,63652557,63657794,63666940,63681766,63685517,63688527,63688789,63689544,63690264,63691102,63691733,63692242,63693549 63622763,63632802,63634801,63646074,63652656,63657907,63667060,63681899,63685590,63688594,63688881,63689735,63690412,63691233,63691862,63692419,63696303 Gene ID= ENSG00000198909.7 TPM= 23.09 Transcript Type= protein_coding chr17 63697804 63700663 63697804 63700663 - transcript4083.chr17.nic@LIMD2 transcript4083.chr17.nic protein_coding 63699257,63699028,63698799,63697804 63700663,63699069,63698938,63698711 Gene ID= ENSG00000136490.8 TPM= 6.34 Transcript Type= NA chr17 63702819 63741875 63702819 63741875 - ENST00000336174.11@STRADA ENST00000336174.11 protein_coding 63741741,63728334,63726638,63723298,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819 63741875,63728413,63726695,63723326,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751 Gene ID= ENSG00000266173.6 TPM= 1.13 Transcript Type= protein_coding chr17 63702819 63741860 63702819 63741860 - ENST00000638708.1@STRADA ENST00000638708.1 protein_coding 63741741,63728334,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819 63741860,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751 Gene ID= ENSG00000266173.6 TPM= 10.19 Transcript Type= protein_coding chr17 63702836 63741874 63702836 63741874 - transcript4093.chr17.nic@STRADA transcript4093.chr17.nic protein_coding 63741741,63728334,63726638,63714006,63713406,63710728,63710491,63707247,63706635,63702836 63741874,63728413,63726695,63714108,63713527,63710836,63710614,63707418,63706739,63704908 Gene ID= ENSG00000266173.6 TPM= 2.04 Transcript Type= NA chr17 63702839 63741797 63702839 63741797 - transcript4094.chr17.nic@STRADA transcript4094.chr17.nic protein_coding 63741741,63728334,63726638,63714006,63713406,63710728,63710491,63707247,63706635,63702839 63741797,63728413,63726695,63714108,63713527,63710836,63710614,63707418,63706739,63704582 Gene ID= ENSG00000266173.6 TPM= 2.04 Transcript Type= NA chr17 63702841 63741874 63702841 63741874 - transcript4095.chr17.nic@STRADA transcript4095.chr17.nic protein_coding 63741741,63728358,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63702841 63741874,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047 Gene ID= ENSG00000266173.6 TPM= 1.81 Transcript Type= NA chr17 63702842 63741986 63702842 63741986 - ENST00000392950.9@STRADA ENST00000392950.9 protein_coding 63741741,63728358,63714006,63713406,63710728,63710491,63707247,63706635,63702842 63741986,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582 Gene ID= ENSG00000266173.6 TPM= 2.94 Transcript Type= protein_coding chr17 63702819 63741861 63702819 63741861 - ENST00000639835.1@STRADA ENST00000639835.1 protein_coding 63741741,63728358,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702819 63741861,63728413,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751 Gene ID= ENSG00000266173.6 TPM= 12 Transcript Type= protein_coding chr17 63702835 63741874 63702835 63741874 - ENST00000375840.9@STRADA ENST00000375840.9 protein_coding 63741741,63728334,63726638,63714006,63713406,63710728,63710491,63707247,63706635,63704341,63704005,63702835 63741874,63728413,63726695,63714108,63713527,63710836,63710614,63707418,63706739,63704582,63704047,63703751 Gene ID= ENSG00000266173.6 TPM= 8.38 Transcript Type= protein_coding chr17 63702835 63741761 63702835 63741761 - ENST00000245865.10@STRADA ENST00000245865.10 protein_coding 63741741,63728334,63726638,63714006,63713406,63710728,63710491,63707247,63706635,63702835 63741761,63728413,63726695,63714108,63713527,63710836,63710614,63707418,63706730,63704908 Gene ID= ENSG00000266173.6 TPM= 1.13 Transcript Type= protein_coding chr17 63745250 63773775 63745250 63773775 - ENST00000225726.9@CCDC47 ENST00000225726.9 protein_coding 63773412,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751940,63745250 63773775,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107,63746961 Gene ID= ENSG00000108588.13 TPM= 227.74 Transcript Type= protein_coding chr17 63746403 63773570 63746403 63773570 - ENST00000403162.7@CCDC47 ENST00000403162.7 protein_coding 63773412,63772777,63765912,63764740,63764016,63761230,63760914,63756469,63756240,63754433,63752741,63752320,63751940,63746403 63773570,63772863,63766194,63764847,63764190,63761351,63760979,63756570,63756350,63754518,63752799,63752429,63752107,63746961 Gene ID= ENSG00000108588.13 TPM= 2.26 Transcript Type= protein_coding chr17 63773884 63819317 63773884 63819317 + ENST00000583590.5@DDX42 ENST00000583590.5 protein_coding 63773884,63774189,63787034,63792412,63798038,63799589,63800468,63805071,63806535,63807724,63808820,63809560,63810513,63811076,63811932,63813228,63815563,63816868,63817694 63774091,63774376,63787270,63792562,63798099,63799625,63800617,63805175,63806654,63807900,63808948,63809659,63810560,63811173,63812208,63813454,63815673,63816966,63819317 Gene ID= ENSG00000198231.12 TPM= 31.69 Transcript Type= protein_coding chr17 63819113 63827664 63819113 63827664 - transcript4099.chr17.nic@FTSJ3 transcript4099.chr17.nic protein_coding 63827370,63827052,63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819113 63827664,63827224,63826928,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994 Gene ID= ENSG00000108592.16 TPM= 67.46 Transcript Type= NA chr17 63819113 63827065 63819113 63827065 - transcript4103.chr17.nic@FTSJ3 transcript4103.chr17.nic protein_coding 63826836,63826567,63826258,63826056,63825536,63825242,63825048,63824825,63824637,63824331,63824084,63823817,63821984,63821723,63821354,63821030,63820839,63820255,63820079,63819113 63827065,63826672,63826304,63826135,63825635,63825436,63825163,63824929,63824737,63824411,63824239,63823952,63822168,63821843,63821643,63821115,63820938,63820438,63820173,63819994 Gene ID= ENSG00000108592.16 TPM= 17.66 Transcript Type= NA chr17 63827460 63832019 63827460 63832019 + ENST00000580864.5@PSMC5 ENST00000580864.5 protein_coding 63827460,63827674,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916 63827514,63827923,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832019 Gene ID= ENSG00000087191.12 TPM= 42.22 Transcript Type= protein_coding chr17 63827684 63832026 63827684 63832026 + ENST00000375812.8@PSMC5 ENST00000375812.8 protein_coding 63827684,63828138,63829494,63829852,63830133,63830271,63830809,63831036,63831327,63831506,63831724,63831916 63827923,63828209,63829563,63829949,63830189,63830501,63830935,63831226,63831425,63831616,63831810,63832026 Gene ID= ENSG00000087191.12 TPM= 42.22 Transcript Type= protein_coding chr17 63832084 63842940 63832084 63842940 - ENST00000448276.6@SMARCD2 ENST00000448276.6 protein_coding 63842459,63837441,63837195,63836922,63835412,63834705,63834474,63834167,63833909,63833587,63833298,63833069,63832084 63842940,63837625,63837237,63837044,63835567,63834800,63834575,63834328,63834006,63833722,63833420,63833170,63832991 Gene ID= ENSG00000108604.15 TPM= 171.15 Transcript Type= protein_coding chr17 64002595 64006932 64002595 64006932 - ENST00000449662.6@ICAM2 ENST00000449662.6 protein_coding 64006631,64005107,64003644,64002595 64006932,64005373,64003964,64002925 Gene ID= ENSG00000108622.10 TPM= 13.58 Transcript Type= protein_coding chr17 64002596 64020602 64002596 64020602 - ENST00000579788.5@ICAM2 ENST00000579788.5 protein_coding 64020523,64006631,64005107,64003644,64002596 64020602,64006735,64005373,64003964,64002925 Gene ID= ENSG00000108622.10 TPM= 8.15 Transcript Type= protein_coding chr17 64058090 64130173 64058090 64130173 - transcript4153.chr17.nnic@ERN1 transcript4153.chr17.nnic protein_coding 64129976,64098121,64080775,64079662,64075175,64071981,64068190,64066671,64065209,64063986,64060469,64058090 64130173,64098241,64080808,64079734,64075247,64072103,64068291,64066932,64065287,64064151,64060587,64058361 Gene ID= ENSG00000178607.15 TPM= 1.81 Transcript Type= NA chr17 64039142 64130125 64039142 64130125 - ENST00000433197.3@ERN1 ENST00000433197.3 protein_coding 64129976,64098121,64080775,64079662,64075175,64071981,64068190,64066671,64065209,64063986,64060469,64057802,64055675,64054738,64054250,64053272,64052780,64049055,64047858,64045359,64044860,64039142 64130125,64098241,64080808,64079734,64075247,64072103,64068291,64066932,64065287,64064151,64060587,64057993,64055948,64054828,64054439,64053371,64052979,64049202,64047985,64045482,64044927,64044200 Gene ID= ENSG00000178607.15 TPM= 20.83 Transcript Type= protein_coding chr17 64147434 64262937 64147434 64262937 - transcript4157.chr17.nnic@TEX2 transcript4157.chr17.nnic protein_coding 64262727,64212574,64194895,64193559,64188168,64177325,64171100,64160801,64154842,64152945,64150841,64147434 64262937,64214242,64195095,64193889,64188415,64177471,64171199,64160933,64154967,64153154,64150961,64149091 Gene ID= ENSG00000136478.7 TPM= 17.5 Transcript Type= NA chr17 64147434 64263306 64147434 64263306 - transcript4164.chr17.nnic@TEX2 transcript4164.chr17.nnic protein_coding 64263168,64212574,64177325,64171100,64160801,64154842,64152945,64150841,64147434 64263306,64214242,64177471,64171199,64160933,64154967,64153154,64150961,64149091 Gene ID= ENSG00000136478.7 TPM= 4.83 Transcript Type= NA chr17 64147687 64263301 64147687 64263301 - ENST00000584379.5@TEX2 ENST00000584379.5 protein_coding 64263168,64212574,64194895,64193559,64188168,64177325,64171100,64160801,64154842,64152945,64150841,64147687 64263301,64214242,64195095,64193889,64188415,64177471,64171199,64160933,64154967,64153154,64150961,64149091 Gene ID= ENSG00000136478.7 TPM= 28.37 Transcript Type= protein_coding chr17 64322502 64413797 64322502 64413797 - transcript4170.chr17.nnic@PECAM1 transcript4170.chr17.nnic protein_coding 64413714,64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64348260,64341634,64329700,64322502 64413797,64390765,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64348322,64341690,64329722,64323845 Gene ID= ENSG00000261371.5 TPM= 34.86 Transcript Type= NA chr17 64322502 64390863 64322502 64390863 - transcript4172.chr17.nnic@PECAM1 transcript4172.chr17.nnic protein_coding 64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64348260,64341634,64329700,64322502 64390863,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64348322,64341690,64329722,64323845 Gene ID= ENSG00000261371.5 TPM= 3.17 Transcript Type= NA chr17 64322502 64390936 64322502 64390936 - transcript4173.chr17.nnic@PECAM1 transcript4173.chr17.nnic protein_coding 64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64341634,64329700,64322502 64390936,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64341690,64329722,64323845 Gene ID= ENSG00000261371.5 TPM= 4.07 Transcript Type= NA chr17 64322502 64390864 64322502 64390864 - transcript4174.chr17.nnic@PECAM1 transcript4174.chr17.nnic protein_coding 64390602,64390489,64377824,64375051,64369750,64363149,64360140,64356111,64354933,64353491,64352390,64350380,64348260,64329700,64322502 64390864,64390515,64378117,64375356,64370025,64363397,64360415,64356398,64355040,64353518,64352463,64350433,64348322,64329722,64323845 Gene ID= ENSG00000261371.5 TPM= 3.17 Transcript Type= NA chr17 64477787 64497057 64477787 64497057 - transcript4183.chr17.nnic@POLG2 transcript4183.chr17.nnic protein_coding 64496407,64492895,64492667,64490796,64483964,64483390,64482919,64480289,64477787 64497057,64493021,64492772,64490969,64485868,64483506,64482999,64480389,64477988 Gene ID= ENSG00000256525.6 TPM= 1.81 Transcript Type= NA chr17 64477785 64497036 64477785 64497036 - ENST00000539111.6@POLG2 ENST00000539111.6 protein_coding 64496407,64492895,64492667,64490796,64485728,64482919,64480289,64477785 64497036,64493021,64492772,64490969,64485868,64482999,64480389,64477988 Gene ID= ENSG00000256525.6 TPM= 9.96 Transcript Type= protein_coding chr17 64498253 64506289 64498253 64506289 - transcript4193.chr17.nic@DDX5 transcript4193.chr17.nic protein_coding 64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64502010,64500549,64498253 64506289,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500882,64500326 Gene ID= ENSG00000108654.13 TPM= 30.44 Transcript Type= NA chr17 64499616 64506521 64499616 64506521 - ENST00000225792.9@DDX5 ENST00000225792.9 protein_coding 64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64502010,64500549,64499616 64506521,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500773,64500326 Gene ID= ENSG00000108654.13 TPM= 632.03 Transcript Type= protein_coding chr17 64498255 64506341 64498255 64506341 - transcript4204.chr17.nic@DDX5 transcript4204.chr17.nic protein_coding 64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64498255 64506341,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069 Gene ID= ENSG00000108654.13 TPM= 93.23 Transcript Type= NA chr17 64499616 64506289 64499616 64506289 - ENST00000581230.5@DDX5 ENST00000581230.5 protein_coding 64506076,64504677,64504222,64503983,64503803,64503430,64503188,64502926,64502439,64502162,64500549,64499616 64506289,64504842,64504318,64504116,64503868,64503571,64503348,64503098,64502549,64502223,64502069,64500326 Gene ID= ENSG00000108654.13 TPM= 425.56 Transcript Type= retained_intron chr17 64542288 64662320 64542288 64662320 - transcript4209.chr17.nnic@SMURF2 transcript4209.chr17.nnic protein_coding 64662170,64661829,64606602,64598382,64593440,64591084,64586086,64583461,64580789,64578492,64571798,64562771,64561500,64557608,64555820,64554856,64551584,64547600,64546263,64542288 64662320,64661902,64606640,64598490,64593573,64591149,64586170,64583544,64580991,64578576,64571956,64562966,64561603,64557722,64555998,64554993,64551704,64547801,64546338,64545947 Gene ID= ENSG00000108854.15 TPM= 6.34 Transcript Type= NA chr17 64749663 64765777 64749663 64765777 - transcript4236.chr17.nnic@ARHGAP27P1-BPTFP1-KPNA2P3 transcript4236.chr17.nnic processed_transcript 64764451,64762355,64761916,64758529,64758242,64754421,64754005,64751807,64750405,64749663 64765777,64762710,64762047,64758626,64758379,64754654,64754164,64751956,64751601,64750008 Gene ID= ENSG00000215769.8 TPM= 2.26 Transcript Type= NA chr17 64749663 64837197 64749663 64837197 - transcript4214.chr17.nnic@PLEKHM1P1 transcript4214.chr17.nnic transcribed_unprocessed_pseudogene 64837056,64829161,64824826,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64785222,64781434,64780343,64779415,64779263,64778397,64764451,64762355,64761916,64758529,64758242,64754421,64754005,64751807,64750405,64749663 64837197,64829249,64824872,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367,64781543,64781039,64780205,64779334,64779079,64764548,64762710,64762047,64758626,64758379,64754654,64754164,64751956,64751601,64750008 Gene ID= ENSG00000214176.9 TPM= 2.26 Transcript Type= NA chr17 64778140 64837197 64778140 64837197 - transcript4223.chr17.nnic@PLEKHM1P1 transcript4223.chr17.nnic transcribed_unprocessed_pseudogene 64837056,64829161,64824625,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64785222,64781434,64780343,64779415,64779263,64778140 64837197,64829249,64824872,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367,64781680,64781039,64780205,64779334,64779079 Gene ID= ENSG00000214176.9 TPM= 8.15 Transcript Type= NA chr17 64784873 64837197 64784873 64837197 - transcript4232.chr17.nnic@PLEKHM1P1 transcript4232.chr17.nnic transcribed_unprocessed_pseudogene 64837056,64829161,64824363,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64784873 64837197,64829249,64824872,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367 Gene ID= ENSG00000214176.9 TPM= 1.81 Transcript Type= NA chr17 64784844 64837197 64784844 64837197 - transcript4233.chr17.nic@PLEKHM1P1 transcript4233.chr17.nic transcribed_unprocessed_pseudogene 64837056,64829161,64824625,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64784844 64837197,64829249,64824872,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367 Gene ID= ENSG00000214176.9 TPM= 5.43 Transcript Type= NA chr17 64782719 64837154 64782719 64837154 - ENST00000582986.5@PLEKHM1P1 ENST00000582986.5 transcribed_unprocessed_pseudogene 64837056,64829161,64822254,64821767,64804830,64800000,64797264,64792349,64787248,64786567,64782719 64837154,64829249,64822393,64822052,64805100,64800917,64797409,64792542,64787311,64786724,64785367 Gene ID= ENSG00000214176.9 TPM= 9.06 Transcript Type= processed_transcript chr17 64820694 64837136 64820694 64837136 - ENST00000584585.1@PLEKHM1P1 ENST00000584585.1 transcribed_unprocessed_pseudogene 64837056,64829161,64824625,64822254,64821767,64820694 64837136,64829249,64824872,64822393,64822052,64821017 Gene ID= ENSG00000214176.9 TPM= 3.62 Transcript Type= processed_transcript chr17 64968035 64975563 64968035 64975563 - transcript4241.chr17.nnic@AMZ2P1 transcript4241.chr17.nnic transcribed_unprocessed_pseudogene 64974951,64974555,64973242,64972754,64972534,64968035 64975563,64974641,64973517,64972927,64972662,64968381 Gene ID= ENSG00000214174.8 TPM= 2.72 Transcript Type= NA chr17 64968035 64975592 64968035 64975592 - transcript4242.chr17.nnic@AMZ2P1 transcript4242.chr17.nnic transcribed_unprocessed_pseudogene 64975560,64974555,64973242,64972754,64972534,64968035 64975592,64974641,64973517,64972927,64972662,64968381 Gene ID= ENSG00000214174.8 TPM= 2.72 Transcript Type= NA chr17 64968035 64975566 64968035 64975566 - transcript4246.chr17.nnic@AMZ2P1 transcript4246.chr17.nnic transcribed_unprocessed_pseudogene 64974951,64973242,64972754,64972534,64968035 64975566,64973517,64972927,64972662,64968381 Gene ID= ENSG00000214174.8 TPM= 1.81 Transcript Type= NA chr17 64968035 64975584 64968035 64975584 - transcript4247.chr17.nnic@AMZ2P1 transcript4247.chr17.nnic transcribed_unprocessed_pseudogene 64975560,64973242,64972754,64972534,64968035 64975584,64973517,64972927,64972662,64968381 Gene ID= ENSG00000214174.8 TPM= 1.81 Transcript Type= NA chr17 64968035 64976047 64968035 64976047 - transcript4251.chr17.nic@AMZ2P1 transcript4251.chr17.nic transcribed_unprocessed_pseudogene 64972754,64972534,64968035 64976047,64972662,64968381 Gene ID= ENSG00000214174.8 TPM= 2.72 Transcript Type= NA chr17 65100771 65111111 65100771 65111111 + transcript4256.chr17.nnic@RGS9 transcript4256.chr17.nnic protein_coding 65100771,65101207,65109192,65110716 65101042,65101296,65109252,65111111 Gene ID= ENSG00000108370.16 TPM= 2.72 Transcript Type= NA chr17 65100812 65113130 65100812 65113130 + ENST00000638125.1@RGS9 ENST00000638125.1 protein_coding 65100812,65101207,65110716 65101042,65101296,65113130 Gene ID= ENSG00000108370.16 TPM= 27.17 Transcript Type= processed_transcript chr17 65528566 65561580 65528566 65561580 - transcript4265.chr17.nic@AXIN2 transcript4265.chr17.nic protein_coding 65560825,65557806,65549520,65541455,65538203,65537324,65536869,65536320,65535626,65533912,65528566 65561580,65558736,65549660,65541557,65538343,65537835,65537063,65536553,65535721,65534079,65530102 Gene ID= ENSG00000168646.12 TPM= 8.38 Transcript Type= NA chr17 65528563 65561647 65528563 65561647 - ENST00000307078.9@AXIN2 ENST00000307078.9 protein_coding 65561450,65557806,65549520,65541455,65538203,65537324,65536869,65536320,65535626,65533912,65528563 65561647,65558736,65549660,65541557,65538343,65537835,65537063,65536553,65535721,65534079,65530102 Gene ID= ENSG00000168646.12 TPM= 4.75 Transcript Type= protein_coding chr17 65528566 65561207 65528566 65561207 - transcript4268.chr17.nic@AXIN2 transcript4268.chr17.nic protein_coding 65560825,65557806,65549520,65541455,65538203,65537324,65536320,65535626,65533912,65528566 65561207,65558736,65549660,65541557,65538343,65537835,65536553,65535721,65534079,65530102 Gene ID= ENSG00000168646.12 TPM= 10.19 Transcript Type= NA chr17 65528567 65561647 65528567 65561647 - ENST00000618960.4@AXIN2 ENST00000618960.4 protein_coding 65561450,65557806,65549520,65541455,65538203,65537324,65536320,65535626,65533912,65528567 65561647,65558736,65549660,65541557,65538343,65537835,65536553,65535721,65534079,65530102 Gene ID= ENSG00000168646.12 TPM= 7.47 Transcript Type= protein_coding chr17 65635538 66192246 65635538 66192246 - transcript4273.chr17.nnic@CEP112 transcript4273.chr17.nnic protein_coding 66191997,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635538 66192246,66183307,66177020,66175216,66132763,66129823,66096632,66096331,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974 Gene ID= ENSG00000154240.16 TPM= 3.62 Transcript Type= NA chr17 65635538 65903355 65635538 65903355 - transcript4275.chr17.nic@CEP112 transcript4275.chr17.nic protein_coding 65903092,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635538 65903355,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974 Gene ID= ENSG00000154240.16 TPM= 2.72 Transcript Type= NA chr17 65635538 66192079 65635538 66192079 - ENST00000535342.6@CEP112 ENST00000535342.6 protein_coding 66191997,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635538 66192079,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974 Gene ID= ENSG00000154240.16 TPM= 1.81 Transcript Type= protein_coding chr17 65635541 66191869 65635541 66191869 - ENST00000392769.6@CEP112 ENST00000392769.6 protein_coding 66191659,66183194,66176830,66175044,66132670,66129746,66096585,66096251,66069915,66066778,66062963,66053736,66029869,66029123,66028313,66027501,66005690,65961463,65927582,65902152,65851804,65750662,65743068,65689129,65640964,65637124,65635541 66191869,66183307,66177020,66175216,66132763,66129823,66096632,66096328,66070001,66066877,66063081,66053879,66030023,66029252,66028405,66027560,66005769,65961598,65927689,65902334,65852034,65750724,65743217,65689218,65641065,65637188,65635974 Gene ID= ENSG00000154240.16 TPM= 1.81 Transcript Type= protein_coding chr17 66491872 66805316 66491872 66805316 + transcript4280.chr17.nnic@PRKCA transcript4280.chr17.nnic protein_coding 66491872,66496201,66641355,66645383,66687111,66688302,66688951,66732688,66735489,66738764,66741659,66742622,66773987,66786867,66788839,66803873 66491959,66496283,66641466,66645511,66687267,66688436,66689047,66732825,66735662,66738855,66741721,66742760,66774067,66786974,66788979,66805316 Gene ID= ENSG00000154229.11 TPM= 5.43 Transcript Type= NA chr17 67044590 67056797 67044590 67056797 + ENST00000226021.4@CACNG1 ENST00000226021.4 protein_coding 67044590,67053996,67055103,67056045 67044889,67054070,67055240,67056797 Gene ID= ENSG00000108878.4 TPM= 6.34 Transcript Type= protein_coding chr17 67070438 67245183 67070438 67245183 - ENST00000358691.9@HELZ ENST00000358691.9 protein_coding 67245148,67243784,67239433,67218595,67215899,67203319,67201129,67195419,67193967,67190157,67189589,67188319,67178659,67167463,67166478,67160897,67160261,67151046,67149867,67148569,67145743,67137931,67135970,67128651,67123963,67122970,67120405,67114324,67109116,67108492,67107169,67086829,67070438 67245183,67243839,67239489,67218822,67215935,67203443,67201185,67195470,67194042,67190355,67189696,67188616,67178926,67167796,67166608,67161076,67160362,67151224,67149985,67148714,67145890,67138114,67136198,67128855,67124014,67123160,67120612,67114403,67109686,67108726,67107685,67087081,67078586 Gene ID= ENSG00000198265.11 TPM= 1.81 Transcript Type= protein_coding chr17 67337916 67366627 67337916 67366627 - ENST00000356126.7@PSMD12 ENST00000356126.7 protein_coding 67366412,67357519,67357303,67350229,67348550,67347336,67347116,67345745,67344606,67342186,67337916 67366627,67357578,67357431,67350336,67348654,67347485,67347250,67345857,67344780,67342263,67341052 Gene ID= ENSG00000197170.9 TPM= 69.73 Transcript Type= protein_coding chr17 67377261 67696632 67377261 67696632 + transcript4291.chr17.nic@PITPNC1 transcript4291.chr17.nic protein_coding 67377261,67532802,67552257,67578186,67632143,67669508,67675479,67687066,67692572 67378202,67532950,67552345,67578257,67632238,67669663,67675542,67687184,67696632 Gene ID= ENSG00000154217.14 TPM= 28.07 Transcript Type= NA chr17 67377261 67697261 67377261 67697261 + transcript4293.chr17.nic@PITPNC1 transcript4293.chr17.nic protein_coding 67377261,67532802,67552257,67578186,67632143,67669508,67675479,67692572 67378202,67532950,67552345,67578257,67632238,67669663,67675542,67697261 Gene ID= ENSG00000154217.14 TPM= 3.62 Transcript Type= NA chr17 67607121 67696633 67607121 67696633 + transcript4296.chr17.nnic@PITPNC1 transcript4296.chr17.nnic protein_coding 67607121,67632143,67669508,67675479,67692572 67607344,67632238,67669663,67675542,67696633 Gene ID= ENSG00000154217.14 TPM= 1.81 Transcript Type= NA chr17 67717833 67744531 67717833 67744531 + ENST00000253247.8@NOL11 ENST00000253247.8 protein_coding 67717833,67719674,67719906,67721378,67722580,67724049,67726460,67734363,67735900,67736666,67737071,67737508,67737847,67738122,67738932,67739516,67743479,67743743 67718088,67719787,67719962,67721526,67722637,67724193,67726648,67734439,67736023,67736754,67737145,67737692,67737972,67738355,67739010,67739608,67743586,67744531 Gene ID= ENSG00000130935.9 TPM= 44.37 Transcript Type= protein_coding chr17 67991101 67996431 67991101 67996431 - ENST00000580729.2@C17orf58 ENST00000580729.2 protein_coding 67996123,67993424,67993044,67991101 67996431,67993984,67993235,67992103 Gene ID= ENSG00000186665.9 TPM= 9.06 Transcript Type= protein_coding chr17 67991102 67993552 67991102 67993552 - ENST00000536693.1@C17orf58 ENST00000536693.1 protein_coding 67992901,67991102 67993552,67992103 Gene ID= ENSG00000186665.9 TPM= 5.43 Transcript Type= retained_intron chr17 67991130 67993649 67991130 67993649 - ENST00000334461.7@C17orf58 ENST00000334461.7 protein_coding 67993424,67992901,67991130 67993649,67993235,67992103 Gene ID= ENSG00000186665.9 TPM= 1.81 Transcript Type= protein_coding chr17 68101573 68129581 68101573 68129581 + transcript4309.chr17.nnic@LINC00674 transcript4309.chr17.nnic transcribed_unprocessed_pseudogene 68101573,68102943,68114422,68125390,68125585 68101959,68103058,68114525,68125480,68129581 Gene ID= ENSG00000237854.3 TPM= 8.15 Transcript Type= NA chr17 68101704 68129581 68101704 68129581 + transcript4311.chr17.nnic@LINC00674 transcript4311.chr17.nnic transcribed_unprocessed_pseudogene 68101704,68114422,68125390,68125585 68101959,68114525,68125480,68129581 Gene ID= ENSG00000237854.3 TPM= 9.06 Transcript Type= NA chr17 68205476 68257167 68205476 68257167 + transcript4318.chr17.nnic@AMZ2 transcript4318.chr17.nnic protein_coding 68205476,68248640,68250188,68250794,68251050,68254404,68255700,68256814 68206238,68248705,68250470,68250967,68251178,68254567,68255876,68257167 Gene ID= ENSG00000196704.11 TPM= 4.83 Transcript Type= NA chr17 68248028 68257167 68248028 68257167 + transcript4322.chr17.nnic@AMZ2 transcript4322.chr17.nnic protein_coding 68248028,68248644,68250188,68250794,68251050,68254404,68255700,68256814 68248070,68248705,68250470,68250967,68251178,68254567,68255876,68257167 Gene ID= ENSG00000196704.11 TPM= 4.74 Transcript Type= NA chr17 68248004 68257164 68248004 68257164 + ENST00000612294.4@AMZ2 ENST00000612294.4 protein_coding 68248004,68248640,68250188,68250794,68251050,68254404,68255700,68256814 68248157,68248705,68250470,68250967,68251178,68254567,68255876,68257164 Gene ID= ENSG00000196704.11 TPM= 3.53 Transcript Type= protein_coding chr17 68248027 68257167 68248027 68257167 + transcript4330.chr17.nic@AMZ2 transcript4330.chr17.nic protein_coding 68248027,68250188,68250794,68251050,68254404,68255700,68256814 68248705,68250480,68250967,68251178,68254567,68255876,68257167 Gene ID= ENSG00000196704.11 TPM= 4.28 Transcript Type= NA chr17 68248035 68257139 68248035 68257139 + ENST00000580753.5@AMZ2 ENST00000580753.5 protein_coding 68248035,68248644,68250188,68250794,68251050,68254404,68255700,68256814 68248058,68248705,68250470,68250967,68251178,68254567,68255876,68257139 Gene ID= ENSG00000196704.11 TPM= 1.97 Transcript Type= protein_coding chr17 68248043 68257154 68248043 68257154 + ENST00000392720.6@AMZ2 ENST00000392720.6 protein_coding 68248043,68248640,68250188,68250794,68251050,68254404,68255700,68256814 68248086,68248705,68250470,68250967,68251178,68254567,68255876,68257154 Gene ID= ENSG00000196704.11 TPM= 36.13 Transcript Type= protein_coding chr17 68248051 68257127 68248051 68257127 + ENST00000359783.8@AMZ2 ENST00000359783.8 protein_coding 68248051,68250188,68251050,68254404,68255700,68256814 68248705,68250470,68251178,68254567,68255876,68257127 Gene ID= ENSG00000196704.11 TPM= 1.06 Transcript Type= protein_coding chr17 68291505 68430435 68291505 68430435 + transcript4337.chr17.nic@ARSG transcript4337.chr17.nic protein_coding 68291505,68306943,68343604,68347125,68351575,68356667,68368548,68370444,68385064,68395073,68401360,68420189,68428637 68291568,68307711,68343791,68347172,68351686,68356804,68368744,68370524,68385172,68395193,68401450,68420506,68430435 Gene ID= ENSG00000141337.12 TPM= 6.34 Transcript Type= NA chr17 68291529 68420858 68291529 68420858 + transcript4347.chr17.nnic@ARSG transcript4347.chr17.nnic protein_coding 68291529,68306943,68343604,68347125,68351575,68356667,68368548,68370444,68385064,68395073,68401360,68420189 68291706,68307711,68343791,68347172,68351686,68356804,68368744,68370524,68385172,68395193,68401450,68420858 Gene ID= ENSG00000141337.12 TPM= 1.81 Transcript Type= NA chr17 68259182 68422731 68259182 68422731 + ENST00000448504.6@ARSG ENST00000448504.6 protein_coding 68259182,68306943,68343604,68347125,68351575,68356667,68368548,68370444,68385064,68395073,68401360,68420189 68259426,68307711,68343791,68347172,68351686,68356804,68368744,68370524,68385172,68395193,68401450,68422731 Gene ID= ENSG00000141337.12 TPM= 8.15 Transcript Type= protein_coding chr17 68291495 68420859 68291495 68420859 + ENST00000621439.4@ARSG ENST00000621439.4 protein_coding 68291495,68306943,68343604,68347125,68351575,68356667,68368548,68370444,68385064,68395073,68401360,68420189 68291568,68307711,68343791,68347172,68351686,68356804,68368744,68370524,68385172,68395193,68401450,68420859 Gene ID= ENSG00000141337.12 TPM= 6.34 Transcript Type= protein_coding chr17 68421265 68457530 68421265 68457530 - transcript4341.chr17.nnic@WIPI1 transcript4341.chr17.nnic protein_coding 68457342,68452910,68450728,68444493,68436382,68435620,68434420,68433468,68429996,68428829,68427135,68426075,68421265 68457530,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820 Gene ID= ENSG00000070540.12 TPM= 1.81 Transcript Type= NA chr17 68421265 68457530 68421265 68457530 - transcript4350.chr17.nic@WIPI1 transcript4350.chr17.nic protein_coding 68457342,68452910,68450728,68444493,68436382,68435620,68433468,68429996,68428829,68427135,68426075,68421265 68457530,68452992,68450897,68444589,68436479,68435712,68433575,68430160,68428936,68427253,68426175,68421820 Gene ID= ENSG00000070540.12 TPM= 1.81 Transcript Type= NA chr17 68425400 68457530 68425400 68457530 - transcript4352.chr17.nic@WIPI1 transcript4352.chr17.nic protein_coding 68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433468,68429996,68428829,68427135,68425400 68457530,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175 Gene ID= ENSG00000070540.12 TPM= 6.34 Transcript Type= NA chr17 68421310 68457499 68421310 68457499 - ENST00000589316.5@WIPI1 ENST00000589316.5 protein_coding 68457342,68452910,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421310 68457499,68452992,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820 Gene ID= ENSG00000070540.12 TPM= 54.33 Transcript Type= nonsense_mediated_decay chr17 68421309 68457499 68421309 68457499 - ENST00000589459.5@WIPI1 ENST00000589459.5 protein_coding 68457342,68450728,68444493,68436382,68435620,68434556,68433464,68429996,68428829,68427135,68426075,68421309 68457499,68450897,68444589,68436479,68435712,68434626,68433575,68430160,68428936,68427253,68426175,68421820 Gene ID= ENSG00000070540.12 TPM= 1.81 Transcript Type= processed_transcript chr17 68512379 68533423 68512379 68533423 + ENST00000392711.5@PRKAR1A ENST00000392711.5 protein_coding 68512379,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277 68512579,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533423 Gene ID= ENSG00000108946.14 TPM= 18.17 Transcript Type= protein_coding chr17 68512418 68533427 68512418 68533427 + transcript4367.chr17.nnic@PRKAR1A transcript4367.chr17.nnic protein_coding 68512418,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277 68512970,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533427 Gene ID= ENSG00000108946.14 TPM= 33.57 Transcript Type= NA chr17 68512032 68532762 68512032 68532762 + ENST00000358598.6@PRKAR1A ENST00000358598.6 protein_coding 68512032,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277 68512142,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762 Gene ID= ENSG00000108946.14 TPM= 52.28 Transcript Type= protein_coding chr17 68512427 68533431 68512427 68533431 + ENST00000589228.5@PRKAR1A ENST00000589228.5 protein_coding 68512427,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277 68512548,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68533431 Gene ID= ENSG00000108946.14 TPM= 586.86 Transcript Type= protein_coding chr17 68512415 68515815 68512415 68515815 + ENST00000592194.1@PRKAR1A ENST00000592194.1 protein_coding 68512415,68515394 68512548,68515815 Gene ID= ENSG00000108946.14 TPM= 1.81 Transcript Type= retained_intron chr17 68512450 68532762 68512450 68532762 + ENST00000536854.6@PRKAR1A ENST00000536854.6 protein_coding 68512450,68514987,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277 68512548,68515119,68515576,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532762 Gene ID= ENSG00000108946.14 TPM= 7.91 Transcript Type= protein_coding chr17 68512450 68532759 68512450 68532759 + ENST00000392710.8@PRKAR1A ENST00000392710.8 protein_coding 68512450,68515394,68522756,68523725,68524016,68524912,68525754,68527840,68528870,68529920,68530277 68512548,68515566,68522926,68523816,68524077,68524958,68525912,68527900,68528991,68530001,68532759 Gene ID= ENSG00000108946.14 TPM= 6.64 Transcript Type= nonsense_mediated_decay chr17 68536871 68601389 68536871 68601389 - ENST00000592554.1@FAM20A ENST00000592554.1 protein_coding 68600263,68555559,68554777,68551873,68543629,68542694,68541985,68540849,68539885,68539337,68536871 68601389,68555743,68554827,68551951,68543721,68542809,68542165,68540958,68539966,68539396,68537741 Gene ID= ENSG00000108950.11 TPM= 15.39 Transcript Type= protein_coding chr17 68867286 68955415 68867286 68955415 - transcript4375.chr17.nic@ABCA8 transcript4375.chr17.nic protein_coding 68955219,68941939,68940758,68936951,68933168,68932288,68929561,68929049,68927916,68924701,68922242,68921382,68919301,68918427,68918047,68917361,68907740,68906044,68903301,68902713,68894880,68894173,68891489,68887336,68887017,68885196,68884331,68883791,68882599,68881863,68881120,68877519,68876628,68876460,68875614,68875260,68869700,68868301,68867286 68955415,68942039,68940962,68937115,68933271,68932514,68929702,68929234,68928063,68924869,68922300,68921492,68919476,68918546,68918185,68917451,68907879,68906163,68903499,68902879,68895013,68894310,68891596,68887506,68887130,68885315,68884396,68883882,68882719,68881980,68881211,68877679,68876703,68876554,68875733,68875400,68869779,68868356,68868183 Gene ID= ENSG00000141338.13 TPM= 40.45 Transcript Type= NA chr17 68867286 68955404 68867286 68955404 - transcript4379.chr17.nic@ABCA8 transcript4379.chr17.nic protein_coding 68955219,68940758,68936951,68933168,68932288,68929561,68929049,68927916,68924701,68922242,68921382,68919301,68918427,68918047,68917361,68907740,68906044,68903301,68902713,68894880,68894173,68891489,68887336,68887017,68885196,68884331,68883791,68882599,68881863,68881120,68877519,68876628,68876460,68875614,68875260,68869700,68868301,68867286 68955404,68940962,68937115,68933271,68932514,68929702,68929234,68928063,68924869,68922300,68921492,68919476,68918546,68918185,68917451,68907879,68906163,68903499,68902879,68895013,68894310,68891596,68887506,68887130,68885315,68884396,68883882,68882719,68881980,68881211,68877679,68876703,68876554,68875733,68875400,68869779,68868356,68868183 Gene ID= ENSG00000141338.13 TPM= 12.38 Transcript Type= NA chr17 68867292 68955392 68867292 68955392 - ENST00000430352.6@ABCA8 ENST00000430352.6 protein_coding 68955219,68941939,68940758,68936951,68933168,68932288,68929561,68929049,68927916,68924701,68922242,68921382,68919301,68918427,68918047,68917361,68907740,68906044,68903301,68902713,68894880,68894173,68891489,68887336,68887017,68885196,68884331,68883791,68882599,68881863,68881120,68877519,68876628,68876460,68875614,68875260,68869700,68868301,68867292 68955392,68942039,68940962,68937115,68933271,68932514,68929702,68929234,68928063,68924869,68922300,68921492,68919476,68918546,68918185,68917451,68907879,68906163,68903499,68902879,68895013,68894310,68891596,68887506,68887130,68885315,68884396,68883882,68882704,68881980,68881211,68877679,68876703,68876554,68875733,68875400,68869779,68868356,68868183 Gene ID= ENSG00000141338.13 TPM= 35.92 Transcript Type= protein_coding chr17 68931762 68955392 68931762 68955392 - ENST00000585850.1@ABCA8 ENST00000585850.1 protein_coding 68955219,68941939,68940758,68936951,68933168,68931762 68955392,68942039,68940962,68937115,68933271,68932514 Gene ID= ENSG00000141338.13 TPM= 3.62 Transcript Type= retained_intron chr17 69247132 69327153 69247132 69327153 - transcript4387.chr17.nic@ABCA5 transcript4387.chr17.nic protein_coding 69327052,69325699,69314314,69313092,69309262,69308280,69306725,69304669,69302718,69301139,69297191,69294655,69291216,69289862,69289177,69287613,69286221,69285898,69283953,69277641,69273959,69271162,69270613,69267943,69264735,69261635,69261125,69260338,69259706,69256157,69255733,69255543,69254315,69253794,69253573,69251747,69250472,69249905,69248262,69247132 69327153,69325817,69314430,69313296,69309423,69308368,69306954,69304810,69302906,69301286,69297359,69294713,69291326,69290037,69289296,69287751,69286311,69286037,69284072,69277842,69274128,69271289,69270750,69268056,69264905,69261748,69261259,69260412,69259797,69256283,69255850,69255634,69254490,69253869,69253667,69251866,69250621,69249984,69248317,69247644 Gene ID= ENSG00000154265.15 TPM= 9.96 Transcript Type= NA chr17 69414698 69543331 69414698 69543331 + ENST00000590474.5@MAP2K6 ENST00000590474.5 protein_coding 69414698,69505780,69516855,69517500,69519313,69520270,69521049,69523514,69524901,69526570,69536115,69541676 69415000,69505846,69516903,69517613,69519432,69520386,69521100,69523641,69524978,69526709,69536160,69543331 Gene ID= ENSG00000108984.13 TPM= 2.72 Transcript Type= protein_coding chr17 69764499 69904718 69764499 69904718 + transcript4396.chr17.nnic@LINC01483 transcript4396.chr17.nnic lincRNA 69764499,69845440,69878966,69902742 69764680,69845486,69879055,69904718 Gene ID= ENSG00000227517.6 TPM= 1.81 Transcript Type= NA chr17 72121020 72126420 72121020 72126420 + ENST00000245479.2@SOX9 ENST00000245479.2 protein_coding 72121020,72122719,72123543 72121822,72122972,72126420 Gene ID= ENSG00000125398.5 TPM= 6.34 Transcript Type= protein_coding chr17 72645950 73092688 72645950 73092688 - ENST00000542342.6@SLC39A11 ENST00000542342.6 protein_coding 73092611,73088657,73084808,73031556,72947731,72849634,72736650,72649170,72648803,72645950 73092688,73088775,73084846,73031714,72947875,72849804,72736719,72649268,72648961,72647662 Gene ID= ENSG00000133195.11 TPM= 5.89 Transcript Type= protein_coding chr17 72645949 73092693 72645949 73092693 - ENST00000255559.7@SLC39A11 ENST00000255559.7 protein_coding 73092611,73088657,73084808,73031556,72947752,72849634,72736650,72649170,72648803,72645949 73092693,73088775,73084846,73031714,72947875,72849804,72736719,72649268,72648961,72647662 Gene ID= ENSG00000133195.11 TPM= 4.07 Transcript Type= protein_coding chr17 73192632 73208503 73192632 73208503 + ENST00000618996.4@COG1 ENST00000618996.4 protein_coding 73192632,73192934,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73207702,73208314 73192831,73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73207739,73208503 Gene ID= ENSG00000166685.11 TPM= 1.2 Transcript Type= protein_coding chr17 73193017 73208504 73193017 73208504 + transcript4415.chr17.nic@COG1 transcript4415.chr17.nic protein_coding 73193017,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73208314 73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73207256,73208504 Gene ID= ENSG00000166685.11 TPM= 3.92 Transcript Type= NA chr17 73192990 73208507 73192990 73208507 + ENST00000299886.8@COG1 ENST00000299886.8 protein_coding 73192990,73196507,73196900,73197226,73199865,73200566,73201109,73203000,73203632,73205553,73206154,73206708,73207181,73208314 73193384,73196751,73197081,73197396,73200021,73200776,73201900,73203146,73203793,73205680,73206262,73206817,73207256,73208507 Gene ID= ENSG00000166685.11 TPM= 130.7 Transcript Type= protein_coding chr17 73207353 73232371 73207353 73232371 - ENST00000405159.7@FAM104A ENST00000405159.7 protein_coding 73232086,73227165,73212678,73207353 73232371,73227264,73212740,73209768 Gene ID= ENSG00000133193.12 TPM= 6.79 Transcript Type= protein_coding chr17 73207353 73232367 73207353 73232367 - ENST00000403627.7@FAM104A ENST00000403627.7 protein_coding 73232086,73227165,73207353 73232367,73227264,73209768 Gene ID= ENSG00000133193.12 TPM= 35.77 Transcript Type= protein_coding chr17 73232382 73248879 73232382 73248879 + transcript4422.chr17.nic@C17orf80 transcript4422.chr17.nic protein_coding 73232382,73233220,73235476,73242244,73242896,73247241 73232489,73233325,73236995,73242351,73243003,73248879 Gene ID= ENSG00000141219.15 TPM= 6.34 Transcript Type= NA chr17 73232637 73248874 73232637 73248874 + ENST00000268942.12@C17orf80 ENST00000268942.12 protein_coding 73232637,73233220,73235476,73242896,73247241 73232717,73233325,73236995,73243003,73248874 Gene ID= ENSG00000141219.15 TPM= 6.34 Transcript Type= protein_coding chr17 73232622 73248947 73232622 73248947 + ENST00000359042.6@C17orf80 ENST00000359042.6 protein_coding 73232622,73233220,73235476,73242244,73242896,73247241 73232717,73233325,73236995,73242351,73243003,73248947 Gene ID= ENSG00000141219.15 TPM= 9.96 Transcript Type= protein_coding chr17 74203653 74210655 74203653 74210655 + ENST00000311111.10@RPL38 ENST00000311111.10 protein_coding 74203653,74203918,74204130,74209187,74209804 74203745,74203958,74204190,74209309,74210655 Gene ID= ENSG00000172809.12 TPM= 248.42 Transcript Type= protein_coding chr17 74203693 74209878 74203693 74209878 + ENST00000584577.5@RPL38 ENST00000584577.5 protein_coding 74203693,74203918,74204130,74209187,74209813 74203745,74203958,74204190,74209309,74209878 Gene ID= ENSG00000172809.12 TPM= 1.2 Transcript Type= protein_coding chr17 74203704 74209896 74203704 74209896 + ENST00000533498.1@RPL38 ENST00000533498.1 protein_coding 74203704,74204130,74209187,74209804 74203958,74204190,74209309,74209896 Gene ID= ENSG00000172809.12 TPM= 8.45 Transcript Type= protein_coding chr17 74213514 74262020 74213514 74262020 + ENST00000269346.8@TTYH2 ENST00000269346.8 protein_coding 74213514,74222485,74230888,74237294,74243374,74243977,74249011,74249344,74249936,74250265,74252234,74253081,74253755,74260129 74213716,74222657,74230999,74237514,74243469,74244049,74249080,74249399,74250028,74250357,74252376,74253266,74253833,74262020 Gene ID= ENSG00000141540.10 TPM= 10.87 Transcript Type= protein_coding chr17 74431407 74451656 74431407 74451656 + transcript4445.chr17.nic@GPRC5C transcript4445.chr17.nic protein_coding 74431407,74439745,74443818,74446849,74448823,74449335 74432141,74440827,74443912,74446998,74448915,74451656 Gene ID= ENSG00000170412.16 TPM= 2.72 Transcript Type= NA chr17 74432114 74447435 74432114 74447435 + transcript4449.chr17.nic@GPRC5C transcript4449.chr17.nic protein_coding 74432114,74439745,74443818,74446849 74432523,74440827,74443912,74447435 Gene ID= ENSG00000170412.16 TPM= 8.6 Transcript Type= NA chr17 74430869 74441307 74430869 74441307 + transcript4451.chr17.nnic@GPRC5C transcript4451.chr17.nnic protein_coding 74430869,74439745,74440995 74432141,74440827,74441307 Gene ID= ENSG00000170412.16 TPM= 1.81 Transcript Type= NA chr17 74430913 74447429 74430913 74447429 + ENST00000392627.5@GPRC5C ENST00000392627.5 protein_coding 74430913,74439745,74443818,74446849 74432141,74440827,74443912,74447429 Gene ID= ENSG00000170412.16 TPM= 52.07 Transcript Type= protein_coding chr17 74466399 74484792 74466399 74484792 + transcript4454.chr17.nnic@CD300A transcript4454.chr17.nnic protein_coding 74466399,74473536,74474532,74477436,74481289,74481726,74484001 74466655,74473874,74474685,74477530,74481326,74481833,74484792 Gene ID= ENSG00000167851.13 TPM= 2.72 Transcript Type= NA chr17 74466604 74484794 74466604 74484794 + transcript4457.chr17.nic@CD300A transcript4457.chr17.nic protein_coding 74466604,74473536,74474532,74477436,74481289,74484001 74466743,74473874,74474685,74477530,74481326,74484794 Gene ID= ENSG00000167851.13 TPM= 1.81 Transcript Type= NA chr17 74466399 74484788 74466399 74484788 + transcript4458.chr17.nnic@CD300A transcript4458.chr17.nnic protein_coding 74466399,74473536,74474532,74477436,74484001 74466743,74473874,74474685,74477530,74484788 Gene ID= ENSG00000167851.13 TPM= 1.81 Transcript Type= NA chr17 74541081 74546170 74541081 74546170 - transcript4462.chr17.nic@CD300C transcript4462.chr17.nic protein_coding 74545722,74544609,74541081 74546170,74544947,74542987 Gene ID= ENSG00000167850.3 TPM= 1.81 Transcript Type= NA chr17 74541108 74546143 74541108 74546143 - ENST00000330793.1@CD300C ENST00000330793.1 protein_coding 74545722,74544609,74542861,74541108 74546143,74544947,74542987,74541736 Gene ID= ENSG00000167850.3 TPM= 2.72 Transcript Type= protein_coding chr17 74609887 74623738 74609887 74623738 - ENST00000392619.1@CD300E ENST00000392619.1 protein_coding 74623582,74617118,74613925,74609887 74623738,74617465,74614033,74612773 Gene ID= ENSG00000186407.6 TPM= 2.72 Transcript Type= protein_coding chr17 74737230 74747335 74737230 74747335 + ENST00000392612.7@RAB37 ENST00000392612.7 protein_coding 74737230,74742254,74743129,74743288,74744308,74744873,74745008,74745306 74737365,74742295,74743195,74743340,74744373,74744929,74745084,74747335 Gene ID= ENSG00000172794.19 TPM= 3.17 Transcript Type= protein_coding chr17 74744841 74747334 74744841 74747334 + ENST00000488977.1@RAB37 ENST00000488977.1 protein_coding 74744841,74745008,74745306 74744929,74745084,74747334 Gene ID= ENSG00000172794.19 TPM= 3.17 Transcript Type= retained_intron chr17 74748652 74769353 74748652 74769353 + ENST00000262613.9@SLC9A3R1 ENST00000262613.9 protein_coding 74748652,74762012,74763367,74766936,74768147,74768468 74749287,74762173,74763520,74766976,74768236,74769353 Gene ID= ENSG00000109062.11 TPM= 318.3 Transcript Type= protein_coding chr17 74770532 74776337 74770532 74776337 - transcript4477.chr17.nic@NAT9 transcript4477.chr17.nic protein_coding 74776267,74775622,74773576,74772896,74772218,74771960,74770532 74776337,74775707,74773685,74773039,74772277,74771977,74771858 Gene ID= ENSG00000109065.11 TPM= 7.24 Transcript Type= NA chr17 74770532 74776341 74770532 74776341 - transcript4491.chr17.nic@NAT9 transcript4491.chr17.nic protein_coding 74776267,74775622,74773576,74772896,74771960,74770532 74776341,74775707,74773688,74773039,74772277,74771858 Gene ID= ENSG00000109065.11 TPM= 4.53 Transcript Type= NA chr17 74770567 74776339 74770567 74776339 - ENST00000580301.5@NAT9 ENST00000580301.5 protein_coding 74776267,74775622,74773576,74772896,74772218,74771960,74770567 74776339,74775707,74773685,74773039,74772277,74772054,74771858 Gene ID= ENSG00000109065.11 TPM= 5.43 Transcript Type= protein_coding chr17 74770547 74776331 74770547 74776331 - ENST00000357814.7@NAT9 ENST00000357814.7 protein_coding 74776267,74775622,74773576,74772896,74772218,74771960,74770547 74776331,74775707,74773688,74773039,74772277,74772054,74771858 Gene ID= ENSG00000109065.11 TPM= 76.07 Transcript Type= protein_coding chr17 74770581 74776323 74770581 74776323 - ENST00000583834.5@NAT9 ENST00000583834.5 protein_coding 74776267,74775622,74773576,74772896,74771960,74770581 74776323,74775707,74773685,74773039,74772277,74771858 Gene ID= ENSG00000109065.11 TPM= 13.58 Transcript Type= retained_intron chr17 74776483 74839752 74776483 74839752 + transcript4508.chr17.nnic@TMEM104 transcript4508.chr17.nnic protein_coding 74776483,74777264,74785482,74786054,74788789,74790200,74790956,74795012,74795524,74819750,74835927 74776577,74777375,74785603,74786149,74788870,74790296,74791036,74795111,74795632,74819843,74839752 Gene ID= ENSG00000109066.13 TPM= 15.85 Transcript Type= NA chr17 74776483 74839750 74776483 74839750 + transcript4509.chr17.nnic@TMEM104 transcript4509.chr17.nnic protein_coding 74776483,74777264,74785482,74788789,74790200,74790956,74795012,74795524,74819750,74835927,74838887 74776577,74777375,74785603,74788870,74790296,74791036,74795111,74795632,74819843,74836497,74839750 Gene ID= ENSG00000109066.13 TPM= 1.81 Transcript Type= NA chr17 74776483 74839779 74776483 74839779 + ENST00000335464.9@TMEM104 ENST00000335464.9 protein_coding 74776483,74777264,74785482,74788789,74790200,74790956,74795012,74795524,74819750,74835927 74776577,74777375,74785603,74788870,74790296,74791036,74795111,74795632,74819843,74839779 Gene ID= ENSG00000109066.13 TPM= 22.19 Transcript Type= protein_coding chr17 74776500 74839751 74776500 74839751 + ENST00000582773.5@TMEM104 ENST00000582773.5 protein_coding 74776500,74777264,74785482,74788789,74790200,74790956,74795012,74795524,74819750,74838887 74776577,74777375,74785603,74788870,74790296,74791036,74795111,74795632,74819843,74839751 Gene ID= ENSG00000109066.13 TPM= 1.81 Transcript Type= protein_coding chr17 74862497 74873023 74862497 74873023 - ENST00000293195.9@FDXR ENST00000293195.9 protein_coding 74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862497 74873023,74872133,74866876,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 1697.79 Transcript Type= protein_coding chr17 74862498 74868753 74862498 74868753 - ENST00000544854.5@FDXR ENST00000544854.5 protein_coding 74868545,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862498 74868753,74866876,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 34.3 Transcript Type= protein_coding chr17 74862499 74873006 74862499 74873006 - ENST00000578473.5@FDXR ENST00000578473.5 protein_coding 74872243,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862499 74873006,74872133,74866879,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 25.84 Transcript Type= retained_intron chr17 74862498 74872974 74862498 74872974 - ENST00000420580.6@FDXR ENST00000420580.6 protein_coding 74872866,74872036,74866784,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862498 74872974,74872133,74866879,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 12.87 Transcript Type= protein_coding chr17 74862542 74873031 74862542 74873031 - ENST00000442102.6@FDXR ENST00000442102.6 protein_coding 74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862542 74873031,74872133,74867005,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 10.87 Transcript Type= protein_coding chr17 74862505 74872968 74862505 74872968 - ENST00000577509.5@FDXR ENST00000577509.5 protein_coding 74872769,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862505 74872968,74872133,74866879,74866568,74866244,74865820,74864931,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 12.43 Transcript Type= nonsense_mediated_decay chr17 74862501 74872961 74862501 74872961 - ENST00000581530.5@FDXR ENST00000581530.5 protein_coding 74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864480,74864148,74863896,74863076,74862501 74872961,74872133,74866876,74866568,74866244,74865820,74864949,74864564,74864347,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 7.18 Transcript Type= protein_coding chr17 74862518 74873015 74862518 74873015 - ENST00000583917.5@FDXR ENST00000583917.5 protein_coding 74872866,74872036,74866784,74866446,74866131,74865719,74864824,74864148,74863896,74863076,74862518 74873015,74872133,74866879,74866568,74866244,74865820,74864931,74864345,74864067,74863246,74862947 Gene ID= ENSG00000161513.11 TPM= 6.44 Transcript Type= protein_coding chr17 74877283 74893680 74877283 74893680 - transcript4529.chr17.nnic@FADS6 transcript4529.chr17.nnic protein_coding 74893352,74892523,74882530,74881068,74879404,74878370,74877722,74877283 74893680,74892689,74882710,74881255,74879583,74878477,74877804,74877496 Gene ID= ENSG00000172782.11 TPM= 3.62 Transcript Type= NA chr17 74877299 74893610 74877299 74893610 - ENST00000612771.4@FADS6 ENST00000612771.4 protein_coding 74893352,74892523,74882530,74881068,74879404,74877299 74893610,74892689,74882710,74881255,74879583,74878477 Gene ID= ENSG00000172782.11 TPM= 16.3 Transcript Type= protein_coding chr17 74916084 74923256 74916084 74923256 - ENST00000614341.4@USH1G ENST00000614341.4 protein_coding 74922910,74919454,74916084 74923256,74920671,74918076 Gene ID= ENSG00000182040.8 TPM= 10.87 Transcript Type= protein_coding chr17 74950742 74953240 74950742 74953240 - transcript4539.chr17.nic@HID1 transcript4539.chr17.nic protein_coding 74953006,74952269,74951905,74950742 74953240,74952360,74952063,74951633 Gene ID= ENSG00000167861.15 TPM= 2.72 Transcript Type= NA chr17 74950744 74972734 74950744 74972734 - ENST00000425042.6@HID1 ENST00000425042.6 protein_coding 74972591,74964483,74963740,74962965,74962234,74961873,74960026,74959881,74958911,74958673,74958327,74958141,74955792,74954138,74953545,74953006,74952269,74951905,74950744 74972734,74964632,74963910,74963081,74962340,74961989,74960248,74959937,74959051,74958763,74958478,74958219,74955956,74954365,74953651,74953086,74952360,74952063,74951633 Gene ID= ENSG00000167861.15 TPM= 9.06 Transcript Type= protein_coding chr17 74987632 75005800 74987632 75005800 + ENST00000337231.5@CDR2L ENST00000337231.5 protein_coding 74987632,74999504,75001341,75002064,75003183 74988122,74999616,75001489,75002228,75005800 Gene ID= ENSG00000109089.7 TPM= 11.77 Transcript Type= protein_coding chr17 75012674 75021261 75012674 75021261 + ENST00000301585.9@MRPL58 ENST00000301585.9 protein_coding 75012674,75017078,75019700,75020313,75020488,75020921 75012872,75017114,75019759,75020395,75020657,75021261 Gene ID= ENSG00000167862.9 TPM= 18.11 Transcript Type= protein_coding chr17 75047245 75065884 75047245 75065884 + ENST00000322444.6@KCTD2 ENST00000322444.6 protein_coding 75047245,75049220,75053014,75059510,75062120,75063018 75047589,75049328,75053105,75059605,75062245,75065884 Gene ID= ENSG00000180901.10 TPM= 61.58 Transcript Type= protein_coding chr17 75038863 75046963 75038863 75046963 - ENST00000301587.8@ATP5H ENST00000301587.8 protein_coding 75046925,75042529,75042181,75040092,75039209,75038863 75046963,75042659,75042277,75040163,75039271,75039063 Gene ID= ENSG00000167863.11 TPM= 105.95 Transcript Type= protein_coding chr17 75087960 75106162 75087960 75106162 + ENST00000329783.8@SLC16A5 ENST00000329783.8 protein_coding 75087960,75089151,75093589,75098038,75100007,75103970,75105880 75088044,75089304,75093835,75098181,75100816,75104180,75106162 Gene ID= ENSG00000170190.15 TPM= 1.81 Transcript Type= protein_coding chr17 75109987 75130265 75109987 75130265 + ENST00000245543.5@ARMC7 ENST00000245543.5 protein_coding 75109987,75110463,75128677 75110379,75110606,75130265 Gene ID= ENSG00000125449.6 TPM= 11.77 Transcript Type= protein_coding chr17 75109978 75114826 75109978 75114826 + ENST00000582136.5@ARMC7 ENST00000582136.5 protein_coding 75109978,75110463,75114169 75110379,75110606,75114826 Gene ID= ENSG00000125449.6 TPM= 1.81 Transcript Type= protein_coding chr17 75130225 75131787 75130225 75131787 - transcript4550.chr17.nic@NT5C transcript4550.chr17.nic protein_coding 75131534,75131181,75130965,75130753,75130225 75131787,75131281,75131105,75130867,75130642 Gene ID= ENSG00000125458.6 TPM= 8.76 Transcript Type= NA chr17 75130228 75131795 75130228 75131795 - ENST00000245552.6@NT5C ENST00000245552.6 protein_coding 75131534,75131181,75131045,75130753,75130228 75131795,75131281,75131105,75130867,75130642 Gene ID= ENSG00000125458.6 TPM= 35.92 Transcript Type= protein_coding chr17 75130228 75131749 75130228 75131749 - ENST00000583655.5@NT5C ENST00000583655.5 protein_coding 75130965,75130753,75130228 75131749,75130867,75130642 Gene ID= ENSG00000125458.6 TPM= 3.32 Transcript Type= retained_intron chr17 75135248 75154683 75135248 75154683 - ENST00000409753.7@JPT1 ENST00000409753.7 protein_coding 75154342,75148529,75147556,75146666,75135248 75154683,75148671,75147653,75146684,75136250 Gene ID= ENSG00000189159.15 TPM= 42.56 Transcript Type= protein_coding chr17 75165586 75182983 75165586 75182983 - ENST00000420826.6@SUMO2 ENST00000420826.6 protein_coding 75182814,75181057,75174752,75165586 75182983,75181188,75174823,75168401 Gene ID= ENSG00000188612.11 TPM= 227.29 Transcript Type= protein_coding chr17 75205691 75235758 75205691 75235758 + ENST00000245544.8@NUP85 ENST00000245544.8 protein_coding 75205691,75208527,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75231340,75231573,75231828,75232851,75233058,75234637,75235100,75235578 75205794,75208620,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75231423,75231638,75231979,75232968,75233158,75234788,75235201,75235758 Gene ID= ENSG00000125450.10 TPM= 31.69 Transcript Type= protein_coding chr17 75205707 75235757 75205707 75235757 + ENST00000579324.5@NUP85 ENST00000579324.5 protein_coding 75205707,75209823,75211992,75213076,75215754,75218185,75225103,75225342,75225698,75226051,75231340,75231573,75231828,75232851,75233058,75234637,75235100,75235578 75205794,75209985,75212062,75213119,75215823,75218306,75225237,75225464,75225829,75226157,75231423,75231638,75231979,75232968,75233158,75234788,75235201,75235757 Gene ID= ENSG00000125450.10 TPM= 1.81 Transcript Type= protein_coding chr17 75236599 75261804 75236599 75261804 - ENST00000537686.5@GGA3 ENST00000537686.5 protein_coding 75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75238652,75236599 75261804,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762,75238389 Gene ID= ENSG00000125447.16 TPM= 26.33 Transcript Type= protein_coding chr17 75236600 75261606 75236600 75261606 - transcript4589.chr17.nic@GGA3 transcript4589.chr17.nic protein_coding 75261548,75248840,75246712,75246509,75244619,75243447,75243063,75242831,75241615,75241400,75240342,75239789,75239375,75238914,75238652,75236600 75261606,75249008,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241516,75241057,75240108,75239571,75239083,75238762,75238389 Gene ID= ENSG00000125447.16 TPM= 4.6 Transcript Type= NA chr17 75236600 75261603 75236600 75261603 - transcript4590.chr17.nic@GGA3 transcript4590.chr17.nic protein_coding 75261548,75246712,75246509,75244619,75243447,75243063,75242831,75242336,75241615,75241400,75240812,75240342,75239789,75239375,75238914,75236600 75261603,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241696,75241516,75241057,75240412,75240108,75239571,75239083,75238762 Gene ID= ENSG00000125447.16 TPM= 4.3 Transcript Type= NA chr17 75236600 75261606 75236600 75261606 - transcript4593.chr17.nic@GGA3 transcript4593.chr17.nic protein_coding 75261548,75246712,75246509,75244619,75243447,75243063,75242831,75241615,75241400,75240342,75239789,75239375,75238914,75238652,75236600 75261606,75246796,75246584,75244717,75243570,75243166,75242911,75242473,75241516,75241057,75240108,75239571,75239083,75238762,75238389 Gene ID= ENSG00000125447.16 TPM= 4.6 Transcript Type= NA chr17 75261666 75266376 75261666 75266376 + transcript4601.chr17.nic@MRPS7 transcript4601.chr17.nic protein_coding 75261666,75262497,75262804,75263340,75265702,75266193 75261983,75262688,75262867,75263507,75265966,75266376 Gene ID= ENSG00000125445.10 TPM= 15.39 Transcript Type= NA chr17 75261674 75266373 75261674 75266373 + ENST00000245539.10@MRPS7 ENST00000245539.10 protein_coding 75261674,75262497,75262804,75263340,75265702 75261983,75262688,75262867,75263507,75266373 Gene ID= ENSG00000125445.10 TPM= 139 Transcript Type= protein_coding chr17 75261912 75266330 75261912 75266330 + ENST00000579002.5@MRPS7 ENST00000579002.5 protein_coding 75261912,75262804,75263340,75265702 75262688,75262867,75263507,75266330 Gene ID= ENSG00000125445.10 TPM= 3.17 Transcript Type= protein_coding chr17 75266233 75271173 75266233 75271173 - ENST00000245551.9@MIF4GD ENST00000245551.9 protein_coding 75271144,75270114,75269347,75268083,75267746,75267538,75266233 75271173,75270245,75269448,75268192,75267901,75267630,75266967 Gene ID= ENSG00000125457.13 TPM= 1.81 Transcript Type= protein_coding chr17 75266228 75271218 75266228 75271218 - ENST00000325102.12@MIF4GD ENST00000325102.12 protein_coding 75271144,75270114,75268083,75267746,75267538,75266228 75271218,75270245,75268192,75267901,75267630,75266967 Gene ID= ENSG00000125457.13 TPM= 29.88 Transcript Type= protein_coding chr17 75266247 75271227 75266247 75271227 - ENST00000579297.5@MIF4GD ENST00000579297.5 protein_coding 75271144,75270114,75269347,75268083,75267746,75267538,75266247 75271227,75270245,75269469,75268192,75267901,75267630,75266967 Gene ID= ENSG00000125457.13 TPM= 5.43 Transcript Type= protein_coding chr17 75266264 75271155 75266264 75271155 - ENST00000577542.5@MIF4GD ENST00000577542.5 protein_coding 75270943,75270114,75269347,75268083,75267746,75267538,75266264 75271155,75270245,75269469,75268192,75267901,75267630,75266967 Gene ID= ENSG00000125457.13 TPM= 1.81 Transcript Type= protein_coding chr17 75266232 75270248 75266232 75270248 - ENST00000618645.4@MIF4GD ENST00000618645.4 protein_coding 75270114,75268083,75267746,75267538,75266232 75270248,75268192,75267901,75267630,75266967 Gene ID= ENSG00000125457.13 TPM= 2.72 Transcript Type= protein_coding chr17 75272976 75289234 75272976 75289234 - transcript4612.chr17.nnic@SLC25A19 transcript4612.chr17.nnic protein_coding 75289089,75286633,75286304,75283423,75278152,75277353,75272976 75289234,75286802,75286459,75283593,75278335,75277483,75273639 Gene ID= ENSG00000125454.11 TPM= 2.56 Transcript Type= NA chr17 75272976 75289433 75272976 75289433 - transcript4614.chr17.nic@SLC25A19 transcript4614.chr17.nic protein_coding 75289354,75286304,75283423,75278152,75277353,75272976 75289433,75286459,75283593,75278335,75277483,75273639 Gene ID= ENSG00000125454.11 TPM= 2.26 Transcript Type= NA chr17 75272976 75289419 75272976 75289419 - transcript4615.chr17.nnic@SLC25A19 transcript4615.chr17.nnic protein_coding 75289354,75283423,75278152,75277353,75272976 75289419,75283593,75278335,75277483,75273639 Gene ID= ENSG00000125454.11 TPM= 1.81 Transcript Type= NA chr17 75273030 75289411 75273030 75289411 - ENST00000580994.5@SLC25A19 ENST00000580994.5 protein_coding 75289354,75288388,75286633,75286304,75283423,75278152,75277353,75273030 75289411,75288461,75286802,75286459,75283593,75278335,75277483,75273639 Gene ID= ENSG00000125454.11 TPM= 15.39 Transcript Type= protein_coding chr17 75272992 75289390 75272992 75289390 - ENST00000416858.6@SLC25A19 ENST00000416858.6 protein_coding 75289354,75288502,75286633,75286304,75283423,75278152,75277353,75272992 75289390,75288591,75286802,75286459,75283593,75278335,75277483,75273639 Gene ID= ENSG00000125454.11 TPM= 7.54 Transcript Type= protein_coding chr17 75272993 75289390 75272993 75289390 - ENST00000442286.6@SLC25A19 ENST00000442286.6 protein_coding 75289354,75286633,75286304,75283423,75278152,75277353,75272993 75289390,75286802,75286459,75283593,75278335,75277483,75273639 Gene ID= ENSG00000125454.11 TPM= 5.73 Transcript Type= protein_coding chr17 75318076 75405653 75318076 75405653 - ENST00000316804.9@GRB2 ENST00000316804.9 protein_coding 75405489,75393551,75332700,75325898,75321659,75318076 75405653,75393765,75332797,75326020,75321827,75320553 Gene ID= ENSG00000177885.13 TPM= 155.6 Transcript Type= protein_coding chr17 75318076 75393864 75318076 75393864 - ENST00000392564.5@GRB2 ENST00000392564.5 protein_coding 75393551,75332700,75325898,75321659,75318076 75393864,75332797,75326020,75321827,75320553 Gene ID= ENSG00000177885.13 TPM= 29.73 Transcript Type= protein_coding chr17 75318076 75405709 75318076 75405709 - ENST00000316615.9@GRB2 ENST00000316615.9 protein_coding 75405489,75393551,75332700,75321659,75318076 75405709,75393765,75332797,75321827,75320553 Gene ID= ENSG00000177885.13 TPM= 12.07 Transcript Type= protein_coding chr17 75456603 75500449 75456603 75500449 + transcript4627.chr17.nic@TMEM94 transcript4627.chr17.nic protein_coding 75456603,75471800,75485428,75485871,75486290,75487932,75488759,75489266,75489576,75490234,75490702,75491049,75491303,75491691,75492474,75492929,75493491,75493699,75494627,75494896,75495284,75495544,75495966,75496282,75496730,75497113,75497781,75498175,75498444,75498629,75498912,75499262 75456751,75471929,75485547,75485998,75486426,75488134,75488910,75489368,75489662,75490350,75490758,75491153,75491455,75491852,75492789,75493102,75493593,75493916,75494808,75495034,75495399,75495643,75496074,75496471,75496807,75497198,75497862,75498323,75498538,75498722,75499082,75500449 Gene ID= ENSG00000177728.16 TPM= 19.27 Transcript Type= NA chr17 75456603 75500449 75456603 75500449 + transcript4630.chr17.nic@TMEM94 transcript4630.chr17.nic protein_coding 75456603,75471800,75485428,75485871,75486290,75487932,75488759,75489266,75489576,75490234,75490702,75491049,75491303,75491691,75492474,75492929,75493491,75493699,75494627,75494896,75495284,75495544,75495966,75496282,75496730,75497113,75497781,75498175,75498444,75498629,75498912,75499262 75456751,75471929,75485547,75485998,75486426,75488134,75488910,75489368,75489662,75490350,75490758,75491153,75491467,75491900,75492789,75493102,75493593,75493916,75494808,75495034,75495399,75495643,75496074,75496471,75496807,75497198,75497862,75498323,75498538,75498722,75499082,75500449 Gene ID= ENSG00000177728.16 TPM= 23.8 Transcript Type= NA chr17 75456641 75500090 75456641 75500090 + ENST00000581085.5@TMEM94 ENST00000581085.5 protein_coding 75456641,75471800,75485428,75485871,75486290,75487932,75488759,75489266,75489576,75490234,75490702,75491049,75491303,75491691,75492474,75492929,75493699,75494627,75494896,75495284,75495544,75495966,75496282,75496730,75497113,75497781,75498175,75498444,75498629,75498912,75499262 75456751,75471929,75485547,75485998,75486426,75488134,75488910,75489368,75489662,75490350,75490758,75491153,75491455,75491900,75492789,75493593,75493916,75494808,75495034,75495399,75495643,75496074,75496471,75496807,75497198,75497862,75498323,75498538,75498722,75499082,75500090 Gene ID= ENSG00000177728.16 TPM= 7.92 Transcript Type= retained_intron chr17 75500261 75515583 75500261 75515583 - ENST00000321617.7@CASKIN2 ENST00000321617.7 protein_coding 75515401,75513711,75508234,75507584,75506984,75506799,75506583,75506305,75505821,75505557,75504812,75504572,75504420,75504215,75503852,75503659,75503389,75501779,75501468,75500261 75515583,75514208,75508285,75507681,75507129,75506894,75506713,75506413,75505929,75505651,75505073,75504693,75504480,75504306,75503962,75503760,75503527,75503254,75501690,75501170 Gene ID= ENSG00000177303.9 TPM= 27.35 Transcript Type= protein_coding chr17 75500261 75515504 75500261 75515504 - transcript4638.chr17.nnic@CASKIN2 transcript4638.chr17.nnic protein_coding 75515401,75513711,75508234,75507584,75506984,75506799,75506583,75506305,75505821,75505557,75504812,75504572,75504420,75504215,75503852,75503659,75503389,75501779,75501468,75500261 75515504,75514250,75508285,75507681,75507129,75506894,75506713,75506413,75505929,75505651,75505073,75504693,75504480,75504306,75503962,75503760,75503527,75503254,75501690,75501170 Gene ID= ENSG00000177303.9 TPM= 22.82 Transcript Type= NA chr17 75516507 75524742 75516507 75524742 + transcript4659.chr17.nnic@TSEN54 transcript4659.chr17.nnic protein_coding 75516507,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75521875,75523275,75523663,75524262 75516616,75516910,75517072,75517244,75517655,75519047,75521510,75521826,75522333,75523335,75523779,75524742 Gene ID= ENSG00000182173.12 TPM= 1.81 Transcript Type= NA chr17 75516507 75524742 75516507 75524742 + transcript4668.chr17.nic@TSEN54 transcript4668.chr17.nic protein_coding 75516507,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262 75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522521,75523335,75523779,75524742 Gene ID= ENSG00000182173.12 TPM= 4.53 Transcript Type= NA chr17 75516507 75524742 75516507 75524742 + transcript4673.chr17.nic@TSEN54 transcript4673.chr17.nic protein_coding 75516507,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523663,75524262 75516616,75516910,75517072,75517244,75517655,75519047,75521510,75523335,75523779,75524742 Gene ID= ENSG00000182173.12 TPM= 1.81 Transcript Type= NA chr17 75516507 75524742 75516507 75524742 + transcript4674.chr17.nic@TSEN54 transcript4674.chr17.nic protein_coding 75516507,75516746,75517009,75517161,75517557,75518995,75521409,75523275,75523663,75524262 75516616,75516910,75517072,75517244,75517655,75519047,75522333,75523335,75523779,75524742 Gene ID= ENSG00000182173.12 TPM= 1.81 Transcript Type= NA chr17 75516507 75524742 75516507 75524742 + transcript4677.chr17.nic@TSEN54 transcript4677.chr17.nic protein_coding 75516507,75516746,75517009,75517161,75517557,75518995,75521409,75523663,75524262 75516616,75516910,75517072,75517244,75517655,75519047,75523335,75523779,75524742 Gene ID= ENSG00000182173.12 TPM= 2.72 Transcript Type= NA chr17 75516525 75524739 75516525 75524739 + ENST00000333213.10@TSEN54 ENST00000333213.10 protein_coding 75516525,75516746,75517009,75517161,75517557,75518995,75521409,75521705,75523275,75523663,75524262 75516616,75516910,75517072,75517244,75517655,75519047,75521510,75522333,75523335,75523779,75524739 Gene ID= ENSG00000182173.12 TPM= 46.18 Transcript Type= protein_coding chr17 75525092 75575210 75525092 75575210 + transcript4644.chr17.nic@LLGL2 transcript4644.chr17.nic protein_coding 75525092,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610,75574874 75525174,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75574668,75575210 Gene ID= ENSG00000073350.13 TPM= 1.94 Transcript Type= NA chr17 75525666 75575219 75525666 75575219 + transcript4645.chr17.nic@LLGL2 transcript4645.chr17.nic protein_coding 75525666,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568961,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610,75574871 75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75574668,75575219 Gene ID= ENSG00000073350.13 TPM= 1.94 Transcript Type= NA chr17 75525666 75575210 75525666 75575210 + transcript4653.chr17.nic@LLGL2 transcript4653.chr17.nic protein_coding 75525666,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574610,75574874 75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574668,75575210 Gene ID= ENSG00000073350.13 TPM= 4.65 Transcript Type= NA chr17 75525739 75575207 75525739 75575207 + ENST00000392550.7@LLGL2 ENST00000392550.7 protein_coding 75525739,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574453,75574610,75574871 75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574495,75574668,75575207 Gene ID= ENSG00000073350.13 TPM= 42.69 Transcript Type= protein_coding chr17 75525726 75575208 75525726 75575208 + ENST00000167462.9@LLGL2 ENST00000167462.9 protein_coding 75525726,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353,75568476,75568772,75568978,75569221,75569963,75570348,75570950,75571667,75571898,75573014,75573481,75573952,75574213,75574610,75574871 75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564507,75568693,75568839,75569131,75569325,75570255,75570498,75571100,75571783,75572064,75573278,75573631,75573980,75574260,75574668,75575208 Gene ID= ENSG00000073350.13 TPM= 13.71 Transcript Type= protein_coding chr17 75525732 75564721 75525732 75564721 + ENST00000375227.8@LLGL2 ENST00000375227.8 protein_coding 75525732,75543397,75556046,75558155,75558512,75559252,75563016,75563331,75563752,75564353 75525825,75543501,75556143,75558236,75558627,75559410,75563178,75563463,75563806,75564721 Gene ID= ENSG00000073350.13 TPM= 13.58 Transcript Type= protein_coding chr17 75626842 75667200 75626842 75667200 - transcript4687.chr17.nic@RECQL5 transcript4687.chr17.nic protein_coding 75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626842 75667200,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628825,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 14.49 Transcript Type= NA chr17 75626842 75667180 75626842 75667180 - transcript4688.chr17.nic@RECQL5 transcript4688.chr17.nic protein_coding 75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626842 75667180,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 4.3 Transcript Type= NA chr17 75626842 75667200 75626842 75667200 - transcript4689.chr17.nnic@RECQL5 transcript4689.chr17.nnic protein_coding 75667044,75666428,75665051,75662479,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626842 75667200,75666571,75665172,75662997,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 3.4 Transcript Type= NA chr17 75626842 75667200 75626842 75667200 - transcript4690.chr17.nic@RECQL5 transcript4690.chr17.nic protein_coding 75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75628934,75628672,75628218,75627623,75626842 75667200,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75628762,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 2.87 Transcript Type= NA chr17 75626842 75667180 75626842 75667180 - transcript4693.chr17.nic@RECQL5 transcript4693.chr17.nic protein_coding 75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75628934,75628672,75628218,75627623,75626842 75667180,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75628762,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 1.97 Transcript Type= NA chr17 75626842 75667200 75626842 75667200 - transcript4694.chr17.nic@RECQL5 transcript4694.chr17.nic protein_coding 75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75628672,75628218,75627623,75626842 75667200,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 5.43 Transcript Type= NA chr17 75626845 75634223 75626845 75634223 - ENST00000443199.6@RECQL5 ENST00000443199.6 protein_coding 75633459,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626845 75634223,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 2.49 Transcript Type= processed_transcript chr17 75626854 75667189 75626854 75667189 - ENST00000317905.9@RECQL5 ENST00000317905.9 protein_coding 75667044,75666428,75665051,75662479,75661606,75660955,75658298,75651186,75631450,75631150,75630974,75630779,75630619,75630184,75629708,75628934,75628672,75628218,75627623,75626854 75667189,75666571,75665172,75662997,75661708,75661066,75658460,75651265,75631668,75631249,75631010,75630837,75630692,75630277,75629842,75629475,75628762,75628442,75627692,75627522 Gene ID= ENSG00000108469.14 TPM= 13.96 Transcript Type= protein_coding chr17 75667346 75708054 75667346 75708054 + ENST00000355423.7@SAP30BP ENST00000355423.7 protein_coding 75667346,75668516,75693440,75699783,75702480,75703311,75703808,75704756,75706008,75706340 75667478,75668625,75693482,75699871,75702571,75703371,75703859,75704814,75706092,75708054 Gene ID= ENSG00000161526.14 TPM= 1.81 Transcript Type= protein_coding chr17 75721436 75757818 75721436 75757818 + ENST00000200181.7@ITGB4 ENST00000200181.7 protein_coding 75721436,75724694,75727195,75727404,75727651,75728377,75729265,75730241,75730875,75731246,75731812,75732163,75733490,75736051,75736288,75736565,75737322,75737538,75739672,75739880,75740358,75740793,75740982,75742341,75742582,75743713,75748841,75750111,75750680,75750974,75752174,75752446,75753765,75754576,75755701,75756429,75756704,75756943,75757200,75757416 75721612,75724782,75727277,75727505,75727855,75728473,75729436,75730504,75730964,75731368,75731973,75732239,75733692,75736154,75736386,75736694,75737444,75737644,75739705,75740071,75740461,75740851,75741005,75742489,75742761,75743861,75749045,75750268,75750860,75751111,75752356,75752577,75753974,75754815,75755850,75756617,75756859,75757107,75757310,75757818 Gene ID= ENSG00000132470.13 TPM= 4.53 Transcript Type= protein_coding chr17 75757944 75765711 75757944 75765711 - ENST00000588479.5@GALK1 ENST00000588479.5 protein_coding 75764972,75763897,75763320,75763014,75762704,75758449,75758210,75757944 75765711,75764086,75763439,75763149,75762885,75758599,75758372,75758127 Gene ID= ENSG00000108479.11 TPM= 42.56 Transcript Type= protein_coding chr17 75757940 75765172 75757940 75765172 - transcript4710.chr17.nic@GALK1 transcript4710.chr17.nic protein_coding 75764972,75763897,75763320,75763014,75762704,75758449,75758210,75757940 75765172,75764086,75763439,75763181,75762885,75758599,75758372,75758127 Gene ID= ENSG00000108479.11 TPM= 1.81 Transcript Type= NA chr17 75757940 75765236 75757940 75765236 - transcript4711.chr17.nic@GALK1 transcript4711.chr17.nic protein_coding 75764972,75763897,75763014,75762704,75758449,75758210,75757940 75765236,75764086,75763439,75762885,75758599,75758372,75758127 Gene ID= ENSG00000108479.11 TPM= 1.81 Transcript Type= NA chr17 75757940 75765176 75757940 75765176 - transcript4712.chr17.nic@GALK1 transcript4712.chr17.nic protein_coding 75764972,75763897,75763320,75763014,75762704,75758210,75757940 75765176,75764086,75763439,75763149,75762885,75758599,75758127 Gene ID= ENSG00000108479.11 TPM= 1.81 Transcript Type= NA chr17 75776434 75779779 75776434 75779779 - ENST00000254810.8@H3F3B ENST00000254810.8 protein_coding 75779657,75779047,75778810,75776434 75779779,75779184,75778963,75778723 Gene ID= ENSG00000132475.10 TPM= 910.98 Transcript Type= protein_coding chr17 75784771 75825799 75784771 75825799 + ENST00000589666.5@UNK ENST00000589666.5 protein_coding 75784771,75809760,75812112,75812455,75813078,75813761,75815169,75816770,75817326,75818103,75818642,75819684,75819920,75822477,75823265,75824262 75784984,75809969,75812288,75812585,75813213,75813878,75815253,75816912,75817526,75818168,75818816,75819785,75820108,75822658,75823522,75825799 Gene ID= ENSG00000132478.9 TPM= 11.77 Transcript Type= protein_coding chr17 75784855 75794198 75784855 75794198 + ENST00000586527.1@UNK ENST00000586527.1 protein_coding 75784855,75791760,75792313,75793443 75784984,75792019,75792478,75794198 Gene ID= ENSG00000132478.9 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr17 75845699 75855420 75845699 75855420 - ENST00000254806.7@WBP2 ENST00000254806.7 protein_coding 75855239,75851568,75849604,75848570,75847796,75847487,75846908,75845699 75855420,75851676,75849739,75848662,75847930,75847609,75846984,75846787 Gene ID= ENSG00000132471.11 TPM= 453.38 Transcript Type= protein_coding chr17 75845709 75855322 75845709 75855322 - ENST00000585462.5@WBP2 ENST00000585462.5 protein_coding 75855180,75851568,75849604,75848570,75847796,75847487,75846908,75845709 75855322,75851676,75849739,75848662,75847930,75847609,75846984,75846787 Gene ID= ENSG00000132471.11 TPM= 27.32 Transcript Type= protein_coding chr17 75874162 75878602 75874162 75878602 - transcript4761.chr17.nic@TRIM47 transcript4761.chr17.nic protein_coding 75876718,75875901,75875400,75874162 75878602,75876492,75875474,75875123 Gene ID= ENSG00000132481.6 TPM= 7.24 Transcript Type= NA chr17 75874161 75878575 75874161 75878575 - ENST00000254816.5@TRIM47 ENST00000254816.5 protein_coding 75877874,75876718,75876262,75875901,75875400,75874161 75878575,75876813,75876492,75876099,75875474,75875123 Gene ID= ENSG00000132481.6 TPM= 74.25 Transcript Type= protein_coding chr17 75879733 75897022 75879733 75897022 - transcript4764.chr17.nic@TRIM65 transcript4764.chr17.nic protein_coding 75896524,75892755,75892267,75892011,75891277,75879733 75897022,75892850,75892500,75892185,75891347,75880629 Gene ID= ENSG00000141569.10 TPM= 1.81 Transcript Type= NA chr17 75888963 75897022 75888963 75897022 - transcript4766.chr17.nnic@TRIM65 transcript4766.chr17.nnic protein_coding 75896524,75892755,75892267,75892011,75891813,75888963 75897022,75892850,75892539,75892185,75891878,75891347 Gene ID= ENSG00000141569.10 TPM= 2.72 Transcript Type= NA chr17 75888960 75897003 75888960 75897003 - ENST00000269383.7@TRIM65 ENST00000269383.7 protein_coding 75896524,75892755,75892267,75892011,75891813,75888960 75897003,75892850,75892500,75892185,75891878,75891347 Gene ID= ENSG00000141569.10 TPM= 18.11 Transcript Type= protein_coding chr17 75941515 75979454 75941515 75979454 - transcript4788.chr17.nnic@ACOX1 transcript4788.chr17.nnic protein_coding 75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75945051,75941515 75979454,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795,75942170 Gene ID= ENSG00000161533.11 TPM= 6.34 Transcript Type= NA chr17 75942878 75979166 75942878 75979166 - transcript4789.chr17.nic@ACOX1 transcript4789.chr17.nic protein_coding 75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946707,75942878 75979166,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795,75943213 Gene ID= ENSG00000161533.11 TPM= 2.72 Transcript Type= NA chr17 75942878 75979145 75942878 75979145 - transcript4790.chr17.nic@ACOX1 transcript4790.chr17.nic protein_coding 75978965,75978534,75973625,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75946707,75942878 75979145,75978693,75973785,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795,75943213 Gene ID= ENSG00000161533.11 TPM= 1.81 Transcript Type= NA chr17 75941507 75979363 75941507 75979363 - ENST00000293217.9@ACOX1 ENST00000293217.9 protein_coding 75978965,75978534,75960215,75957459,75955828,75955566,75953451,75951415,75950774,75949718,75949495,75949217,75948251,75941507 75979363,75978693,75960375,75957566,75955947,75955681,75953620,75951577,75950964,75949897,75949600,75949360,75948457,75946795 Gene ID= ENSG00000161533.11 TPM= 56.14 Transcript Type= protein_coding chr17 75979206 76005997 75979206 76005997 + transcript4794.chr17.nnic@TEN1-CDK3 transcript4794.chr17.nnic protein_coding 75979206,75986187,75991466,76000141,76001412,76001874,76002022,76002248,76002511,76003195,76005298 75979511,75986284,75991623,76000489,76001541,76001951,76002142,76002418,76002612,76003398,76005997 Gene ID= ENSG00000261408.6 TPM= 2.72 Transcript Type= NA chr17 75979206 76005997 75979206 76005997 + transcript4796.chr17.nnic@TEN1-CDK3 transcript4796.chr17.nnic protein_coding 75979206,75986187,75991466,76000141,76001412,76001874,76002022,76002248,76002511,76003195,76005298 75979511,75986284,75991623,76000695,76001541,76001951,76002142,76002418,76002612,76003398,76005997 Gene ID= ENSG00000261408.6 TPM= 3.62 Transcript Type= NA chr17 75979206 76005997 75979206 76005997 + transcript4800.chr17.nic@TEN1-CDK3 transcript4800.chr17.nic protein_coding 75979206,75986187,75991466,76000141,76002022,76002248,76002511,76003195,76005298 75979511,75986284,75991623,76001951,76002142,76002418,76002612,76003398,76005997 Gene ID= ENSG00000261408.6 TPM= 4.53 Transcript Type= NA chr17 75979206 76005997 75979206 76005997 + transcript4801.chr17.nic@TEN1-CDK3 transcript4801.chr17.nic protein_coding 75979206,75986187,75991466,76000141,76002022,76002248,76002511,76005298 75979511,75986284,75991623,76001951,76002142,76002418,76003398,76005997 Gene ID= ENSG00000261408.6 TPM= 1.81 Transcript Type= NA chr17 75979260 76005999 75979260 76005999 + ENST00000569284.1@TEN1-CDK3 ENST00000569284.1 protein_coding 75979260,75986187,75991466,76000141,76001874,76002022,76002248,76002511,76003195,76005298 75979511,75986284,75991623,76001541,76001951,76002142,76002418,76002612,76003398,76005999 Gene ID= ENSG00000261408.6 TPM= 4.53 Transcript Type= protein_coding chr17 75979220 76000586 75979220 76000586 + ENST00000397640.5@TEN1 ENST00000397640.5 protein_coding 75979220,75986187,75991466,76000141 75979511,75986284,75991623,76000586 Gene ID= ENSG00000257949.6 TPM= 28.98 Transcript Type= protein_coding chr17 76080981 76103791 76080981 76103791 - transcript4828.chr17.nnic@EXOC7 transcript4828.chr17.nnic protein_coding 76103633,76103361,76101679,76101271,76097796,76094414,76089175,76088771,76088464,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76080981 76103791,76103426,76101863,76101376,76098018,76094581,76089320,76088923,76088562,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750 Gene ID= ENSG00000182473.21 TPM= 17.54 Transcript Type= NA chr17 76081017 76103695 76081017 76103695 - ENST00000332065.9@EXOC7 ENST00000332065.9 protein_coding 76103633,76103361,76101679,76101271,76097796,76094414,76089175,76088771,76088464,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76081017 76103695,76103426,76101863,76101376,76098018,76094581,76089320,76088923,76088562,76088122,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750 Gene ID= ENSG00000182473.21 TPM= 75.5 Transcript Type= protein_coding chr17 76081018 76103758 76081018 76103758 - ENST00000589210.5@EXOC7 ENST00000589210.5 protein_coding 76103633,76103361,76101679,76101271,76097796,76094414,76091143,76089175,76088771,76088464,76088060,76087654,76086080,76085677,76085314,76084517,76084248,76084006,76081018 76103758,76103426,76101863,76101376,76098018,76094581,76091235,76089320,76088923,76088562,76088122,76087720,76086145,76085797,76085409,76084580,76084289,76084139,76083750 Gene ID= ENSG00000182473.21 TPM= 17.81 Transcript Type= protein_coding chr17 76092315 76103743 76092315 76103743 - ENST00000405068.3@EXOC7 ENST00000405068.3 protein_coding 76103633,76103361,76101679,76101271,76097796,76092315 76103743,76103426,76101863,76101376,76098018,76094581 Gene ID= ENSG00000182473.21 TPM= 2.72 Transcript Type= retained_intron chr17 76101012 76103734 76101012 76103734 - ENST00000406660.4@EXOC7 ENST00000406660.4 protein_coding 76103633,76103361,76101679,76101012 76103734,76103426,76101863,76101376 Gene ID= ENSG00000182473.21 TPM= 3.62 Transcript Type= protein_coding chr17 76265202 76271299 76265202 76271299 + ENST00000327490.7@UBALD2 ENST00000327490.7 protein_coding 76265202,76265907,76270194 76265625,76265969,76271299 Gene ID= ENSG00000185262.8 TPM= 5.43 Transcript Type= protein_coding chr17 76309486 76354149 76309486 76354149 - ENST00000446526.7@PRPSAP1 ENST00000446526.7 protein_coding 76353534,76348529,76344671,76332263,76330551,76330043,76328717,76313821,76312870,76309486 76354149,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76313016,76311700 Gene ID= ENSG00000161542.16 TPM= 65.65 Transcript Type= protein_coding chr17 76310916 76353931 76310916 76353931 - transcript4841.chr17.nic@PRPSAP1 transcript4841.chr17.nic protein_coding 76353534,76348529,76344671,76332263,76330551,76330043,76328717,76313199,76312870,76310916 76353931,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76313016,76311700 Gene ID= ENSG00000161542.16 TPM= 4.53 Transcript Type= NA chr17 76310916 76353931 76310916 76353931 - transcript4845.chr17.nic@PRPSAP1 transcript4845.chr17.nic protein_coding 76353534,76348529,76344671,76332263,76330551,76330043,76328717,76312870,76310916 76353931,76348581,76344737,76332435,76330666,76330098,76328862,76313891,76311700 Gene ID= ENSG00000161542.16 TPM= 8.15 Transcript Type= NA chr17 76310916 76353931 76310916 76353931 - transcript4848.chr17.nnic@PRPSAP1 transcript4848.chr17.nnic protein_coding 76353534,76348529,76344671,76332263,76329875,76328717,76312870,76310916 76353931,76348581,76344737,76332435,76330666,76329115,76313891,76311700 Gene ID= ENSG00000161542.16 TPM= 2.72 Transcript Type= NA chr17 76383199 76387860 76383199 76387860 + transcript4849.chr17.nic@SPHK1 transcript4849.chr17.nic protein_coding 76383199,76385451,76385985,76386221,76386393,76386806 76383529,76385654,76386137,76386315,76386508,76387860 Gene ID= ENSG00000176170.13 TPM= 4.03 Transcript Type= NA chr17 76384609 76387860 76384609 76387860 + ENST00000592299.5@SPHK1 ENST00000592299.5 protein_coding 76384609,76385451,76385985,76386221,76386393,76386806 76384806,76385654,76386137,76386315,76386508,76387860 Gene ID= ENSG00000176170.13 TPM= 6.75 Transcript Type= protein_coding chr17 76382977 76387856 76382977 76387856 + ENST00000591762.1@SPHK1 ENST00000591762.1 protein_coding 76382977,76385451,76386221,76386393,76386806 76383529,76386137,76386315,76386508,76387856 Gene ID= ENSG00000176170.13 TPM= 2.22 Transcript Type= retained_intron chr17 76384646 76387860 76384646 76387860 + transcript4856.chr17.nic@SPHK1 transcript4856.chr17.nic protein_coding 76384646,76386221,76386393,76386806 76386137,76386315,76386508,76387860 Gene ID= ENSG00000176170.13 TPM= 2.9 Transcript Type= NA chr17 76384650 76387855 76384650 76387855 + ENST00000323374.8@SPHK1 ENST00000323374.8 protein_coding 76384650,76385451,76385985,76386221,76386393,76386806 76385169,76385654,76386137,76386315,76386508,76387855 Gene ID= ENSG00000176170.13 TPM= 1.31 Transcript Type= protein_coding chr17 76389531 76453220 76389531 76453220 - transcript4859.chr17.nic@UBE2O transcript4859.chr17.nic protein_coding 76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400222,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391910,76391756,76389531 76453220,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391813,76391613 Gene ID= ENSG00000175931.12 TPM= 6.34 Transcript Type= NA chr17 76399696 76401873 76399696 76401873 - transcript4860.chr17.nic@UBE2O transcript4860.chr17.nic protein_coding 76401011,76400441,76399696 76401873,76400550,76400297 Gene ID= ENSG00000175931.12 TPM= 1.81 Transcript Type= NA chr17 76389451 76453206 76389451 76453206 - ENST00000319380.11@UBE2O ENST00000319380.11 protein_coding 76452725,76405513,76405206,76402602,76402064,76401011,76400441,76400147,76399449,76398837,76398472,76398255,76397799,76396128,76395725,76391910,76391756,76389451 76453206,76405572,76405316,76402699,76402127,76401154,76400550,76400297,76399921,76398991,76398584,76398383,76397888,76396821,76395861,76392113,76391813,76391613 Gene ID= ENSG00000175931.12 TPM= 23.54 Transcript Type= protein_coding chr17 76470878 76501374 76470878 76501374 - transcript4865.chr17.nnic@RHBDF2 transcript4865.chr17.nnic protein_coding 76500876,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470878 76501374,76487909,76481545,76479854,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052 Gene ID= ENSG00000129667.12 TPM= 4.23 Transcript Type= NA chr17 76470878 76501407 76470878 76501407 - transcript4866.chr17.nic@RHBDF2 transcript4866.chr17.nic protein_coding 76500936,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470878 76501407,76487909,76481545,76479854,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052 Gene ID= ENSG00000129667.12 TPM= 10.57 Transcript Type= NA chr17 76470878 76501429 76470878 76501429 - transcript4867.chr17.nic@RHBDF2 transcript4867.chr17.nic protein_coding 76501353,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470878 76501429,76487909,76481545,76479854,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052 Gene ID= ENSG00000129667.12 TPM= 13.28 Transcript Type= NA chr17 76470878 76501407 76470878 76501407 - transcript4870.chr17.nic@RHBDF2 transcript4870.chr17.nic protein_coding 76500936,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470878 76501407,76487909,76481545,76479941,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052 Gene ID= ENSG00000129667.12 TPM= 4.53 Transcript Type= NA chr17 76470896 76501407 76470896 76501407 - ENST00000313080.8@RHBDF2 ENST00000313080.8 protein_coding 76501353,76487712,76481375,76479733,76479082,76478806,76477657,76477180,76476830,76475030,76474730,76474373,76474033,76473839,76473648,76473252,76473005,76472686,76470896 76501407,76487909,76481545,76479941,76479277,76479009,76477785,76477298,76477024,76475141,76474804,76474534,76474142,76473902,76473742,76473327,76473105,76472839,76472052 Gene ID= ENSG00000129667.12 TPM= 16.3 Transcript Type= protein_coding chr17 76527356 76537905 76527356 76537905 - ENST00000293230.9@CYGB ENST00000293230.9 protein_coding 76537400,76531460,76530979,76527356 76537905,76531691,76531142,76528611 Gene ID= ENSG00000161544.9 TPM= 9.96 Transcript Type= protein_coding chr17 76557736 76565347 76557736 76565347 + transcript4882.chr17.nnic@SNHG16 transcript4882.chr17.nnic processed_transcript 76557736,76561288,76563119,76563778 76557857,76561398,76563752,76565347 Gene ID= ENSG00000163597.14 TPM= 17.21 Transcript Type= NA chr17 76557766 76565348 76557766 76565348 + transcript4883.chr17.nic@SNHG16 transcript4883.chr17.nic processed_transcript 76557766,76558945,76561288,76563119 76557857,76559043,76561398,76565348 Gene ID= ENSG00000163597.14 TPM= 45.73 Transcript Type= NA chr17 76557770 76565343 76557770 76565343 + ENST00000493536.5@SNHG16 ENST00000493536.5 processed_transcript 76557770,76561288,76563119 76557857,76561398,76565343 Gene ID= ENSG00000163597.14 TPM= 30.34 Transcript Type= lincRNA chr17 76565352 76586147 76565352 76586147 - transcript4888.chr17.nnic@ST6GALNAC2 transcript4888.chr17.nnic protein_coding 76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565352 76586147,76578816,76574539,76573363,76572802,76570668,76568796,76567552,76566271 Gene ID= ENSG00000070731.10 TPM= 1.81 Transcript Type= NA chr17 76565352 76586187 76565352 76586187 - transcript4891.chr17.nic@ST6GALNAC2 transcript4891.chr17.nic protein_coding 76585684,76574365,76573195,76572637,76570565,76568713,76567453,76565352 76586187,76574539,76573363,76572775,76570668,76568796,76567552,76566271 Gene ID= ENSG00000070731.10 TPM= 2.72 Transcript Type= NA chr17 76565379 76586128 76565379 76586128 - ENST00000225276.9@ST6GALNAC2 ENST00000225276.9 protein_coding 76585684,76578756,76574365,76573195,76572637,76570565,76568713,76567453,76565379 76586128,76578816,76574539,76573363,76572775,76570668,76568796,76567552,76566271 Gene ID= ENSG00000070731.10 TPM= 14.49 Transcript Type= protein_coding chr17 76672551 76710955 76672551 76710955 - ENST00000355797.7@MXRA7 ENST00000355797.7 protein_coding 76710605,76688113,76685072,76672551 76710955,76688176,76685165,76677702 Gene ID= ENSG00000182534.13 TPM= 216.43 Transcript Type= protein_coding chr17 76679569 76711016 76679569 76711016 - ENST00000449428.6@MXRA7 ENST00000449428.6 protein_coding 76710605,76688113,76685072,76679569 76711016,76688176,76685165,76680879 Gene ID= ENSG00000182534.13 TPM= 752.51 Transcript Type= protein_coding chr17 76679569 76711004 76679569 76711004 - ENST00000375036.6@MXRA7 ENST00000375036.6 protein_coding 76710605,76688113,76685072,76683847,76679569 76711004,76688176,76685165,76683927,76680879 Gene ID= ENSG00000182534.13 TPM= 150.32 Transcript Type= protein_coding chr17 76718446 76726784 76718446 76726784 - ENST00000542934.5@JMJD6 ENST00000542934.5 protein_coding 76726347,76725467,76723772,76721798,76721263,76720360,76718446 76726784,76725855,76724058,76721933,76721356,76720498,76718860 Gene ID= ENSG00000070495.14 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr17 76718445 76726560 76718445 76726560 - transcript4930.chr17.nic@JMJD6 transcript4930.chr17.nic protein_coding 76726347,76725467,76723772,76721263,76720360,76718445 76726560,76725855,76724058,76721933,76720498,76718860 Gene ID= ENSG00000070495.14 TPM= 1.81 Transcript Type= NA chr17 76718445 76726639 76718445 76726639 - transcript4933.chr17.nic@JMJD6 transcript4933.chr17.nic protein_coding 76726347,76725467,76723772,76720360,76718445 76726639,76725855,76724058,76721933,76718860 Gene ID= ENSG00000070495.14 TPM= 1.81 Transcript Type= NA chr17 76718453 76726590 76718453 76726590 - ENST00000397625.8@JMJD6 ENST00000397625.8 protein_coding 76726347,76725467,76723772,76721798,76720360,76718453 76726590,76725855,76724058,76721933,76720498,76718860 Gene ID= ENSG00000070495.14 TPM= 28.98 Transcript Type= protein_coding chr17 76725983 76733881 76725983 76733881 + transcript4935.chr17.nnic@METTL23 transcript4935.chr17.nnic protein_coding 76725983,76729690,76732978,76733293,76733521 76726287,76729794,76733215,76733377,76733881 Gene ID= ENSG00000181038.13 TPM= 2.72 Transcript Type= NA chr17 76726843 76733936 76726843 76733936 + ENST00000588783.5@METTL23 ENST00000588783.5 protein_coding 76726843,76729690,76732978,76733293,76733521 76727178,76729794,76733215,76733381,76733936 Gene ID= ENSG00000181038.13 TPM= 3.62 Transcript Type= protein_coding chr17 76726830 76733879 76726830 76733879 + ENST00000615984.4@METTL23 ENST00000615984.4 protein_coding 76726830,76729690,76732978,76733293,76733521 76727213,76729794,76733215,76733377,76733879 Gene ID= ENSG00000181038.13 TPM= 2.72 Transcript Type= protein_coding chr17 76726840 76738529 76726840 76738529 + transcript4950.chr17.nnic@METTL23 transcript4950.chr17.nnic protein_coding 76726840,76732978,76733293,76736190 76727213,76733215,76733377,76738529 Gene ID= ENSG00000181038.13 TPM= 2.72 Transcript Type= NA chr17 76726854 76733878 76726854 76733878 + ENST00000590964.5@METTL23 ENST00000590964.5 protein_coding 76726854,76732978,76733293,76733521 76727178,76733215,76733377,76733878 Gene ID= ENSG00000181038.13 TPM= 9.06 Transcript Type= protein_coding chr17 76734117 76737896 76734117 76737896 - transcript4953.chr17.nic@SRSF2 transcript4953.chr17.nic protein_coding 76736799,76736154,76735772,76734117 76737896,76736464,76735875,76735158 Gene ID= ENSG00000161547.16 TPM= 8.15 Transcript Type= NA chr17 76734119 76737335 76734119 76737335 - transcript4957.chr17.nnic@SRSF2 transcript4957.chr17.nnic protein_coding 76736799,76735768,76734119 76737335,76736464,76735590 Gene ID= ENSG00000161547.16 TPM= 3.62 Transcript Type= NA chr17 76734119 76737374 76734119 76737374 - ENST00000359995.9@SRSF2 ENST00000359995.9 protein_coding 76736799,76736154,76734119 76737374,76736464,76735158 Gene ID= ENSG00000161547.16 TPM= 91.01 Transcript Type= protein_coding chr17 76734115 76737333 76734115 76737333 - ENST00000392485.2@SRSF2 ENST00000392485.2 protein_coding 76736799,76734115 76737333,76736464 Gene ID= ENSG00000161547.16 TPM= 21.73 Transcript Type= protein_coding chr17 76734123 76737308 76734123 76737308 - ENST00000585202.5@SRSF2 ENST00000585202.5 protein_coding 76736799,76736154,76735061,76734123 76737308,76736464,76735158,76734562 Gene ID= ENSG00000161547.16 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr17 76734147 76736555 76734147 76736555 - ENST00000582449.5@SRSF2 ENST00000582449.5 protein_coding 76736154,76735772,76734147 76736555,76735875,76735158 Gene ID= ENSG00000161547.16 TPM= 1.81 Transcript Type= retained_intron chr17 76736534 76779252 76736534 76779252 + transcript4917.chr17.nnic@MFSD11 transcript4917.chr17.nnic protein_coding 76736534,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188 76737086,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76779252 Gene ID= ENSG00000092931.11 TPM= 5.43 Transcript Type= NA chr17 76737487 76779254 76737487 76779254 + transcript4918.chr17.nnic@MFSD11 transcript4918.chr17.nnic protein_coding 76737487,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188 76737622,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76779254 Gene ID= ENSG00000092931.11 TPM= 2.72 Transcript Type= NA chr17 76738001 76779254 76738001 76779254 + transcript4926.chr17.nic@MFSD11 transcript4926.chr17.nic protein_coding 76738001,76738282,76738938,76740957,76741969,76742177,76744322,76754047,76767386,76769746,76774997,76776406,76778188 76738165,76738448,76738993,76741064,76742048,76742273,76744466,76754087,76767451,76769871,76775171,76776541,76779254 Gene ID= ENSG00000092931.11 TPM= 1.81 Transcript Type= NA chr17 76736565 76779254 76736565 76779254 + ENST00000621483.4@MFSD11 ENST00000621483.4 protein_coding 76736565,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188 76737091,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76779254 Gene ID= ENSG00000092931.11 TPM= 9.06 Transcript Type= protein_coding chr17 76737701 76779286 76737701 76779286 + ENST00000336509.8@MFSD11 ENST00000336509.8 protein_coding 76737701,76738282,76738938,76740957,76741969,76742177,76743398,76744322,76754047,76767386,76769746,76774997,76776406,76778188 76737883,76738448,76738993,76741064,76742048,76742273,76743456,76744466,76754087,76767451,76769871,76775171,76776541,76779286 Gene ID= ENSG00000092931.11 TPM= 2.72 Transcript Type= protein_coding chr17 76868471 76950390 76868471 76950390 + transcript4962.chr17.nic@MGAT5B transcript4962.chr17.nic protein_coding 76868471,76872851,76882151,76902555,76903303,76904252,76905169,76906018,76924966,76926597,76937988,76940402,76940732,76946376,76947830,76948640 76869097,76872963,76882298,76902670,76903376,76904422,76905333,76906187,76925097,76926730,76938143,76940548,76940848,76946450,76948086,76950390 Gene ID= ENSG00000167889.12 TPM= 1.81 Transcript Type= NA chr17 77088673 77094990 77088673 77094990 + ENST00000434411.5@SNHG20 ENST00000434411.5 processed_transcript 77088673,77089153,77093244 77088949,77089271,77094990 Gene ID= ENSG00000234912.11 TPM= 3.62 Transcript Type= sense_overlapping chr17 77140901 77217097 77140901 77217097 + transcript4970.chr17.nnic@SEC14L1 transcript4970.chr17.nnic protein_coding 77140901,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216167,77216414 77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216127,77216387,77217097 Gene ID= ENSG00000129657.14 TPM= 30.94 Transcript Type= NA chr17 77140901 77217097 77140901 77217097 + transcript4971.chr17.nnic@SEC14L1 transcript4971.chr17.nnic protein_coding 77140901,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216180,77216414 77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216153,77216387,77217097 Gene ID= ENSG00000129657.14 TPM= 24.6 Transcript Type= NA chr17 77140901 77217095 77140901 77217095 + transcript4979.chr17.nnic@SEC14L1 transcript4979.chr17.nnic protein_coding 77140901,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216167 77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216127,77217095 Gene ID= ENSG00000129657.14 TPM= 20.08 Transcript Type= NA chr17 77140901 77217093 77140901 77217093 + transcript4981.chr17.nnic@SEC14L1 transcript4981.chr17.nnic protein_coding 77140901,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216245 77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216179,77217093 Gene ID= ENSG00000129657.14 TPM= 16.45 Transcript Type= NA chr17 77185214 77217097 77185214 77217097 + transcript4984.chr17.nnic@SEC14L1 transcript4984.chr17.nnic protein_coding 77185214,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216167,77216414 77185383,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77216127,77216387,77217097 Gene ID= ENSG00000129657.14 TPM= 9.51 Transcript Type= NA chr17 77140932 77214329 77140932 77214329 + ENST00000585618.5@SEC14L1 ENST00000585618.5 protein_coding 77140932,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918 77141054,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214329 Gene ID= ENSG00000129657.14 TPM= 2.26 Transcript Type= protein_coding chr17 77141032 77217101 77141032 77217101 + ENST00000443798.8@SEC14L1 ENST00000443798.8 protein_coding 77141032,77142646,77143567,77190803,77191181,77193421,77194677,77196202,77200484,77203570,77205276,77206229,77206728,77209342,77211950,77213314,77213918,77216549 77141107,77142750,77143659,77190952,77191312,77193549,77194911,77196311,77200673,77203658,77205346,77206400,77206862,77209476,77212201,77213492,77214019,77217101 Gene ID= ENSG00000129657.14 TPM= 9.06 Transcript Type= protein_coding chr17 77281410 77500592 77281410 77500592 + ENST00000427177.5@SEPT9 ENST00000427177.5 protein_coding 77281410,77307141,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523 77281554,77307197,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500592 Gene ID= ENSG00000184640.17 TPM= 12.83 Transcript Type= protein_coding chr17 77319515 77500592 77319515 77500592 + ENST00000329047.12@SEPT9 ENST00000329047.12 protein_coding 77319515,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523 77320348,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500592 Gene ID= ENSG00000184640.17 TPM= 20.98 Transcript Type= protein_coding chr17 77433682 77500594 77433682 77500594 + transcript5002.chr17.nnic@SEPT9 transcript5002.chr17.nnic protein_coding 77433682,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523 77433751,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500594 Gene ID= ENSG00000184640.17 TPM= 10.41 Transcript Type= NA chr17 77373190 77500594 77373190 77500594 + ENST00000423034.6@SEPT9 ENST00000423034.6 protein_coding 77373190,77402059,77482144,77487424,77488240,77488727,77490742,77492621,77492980,77497315,77498523 77373552,77402703,77482335,77487552,77488321,77488864,77490859,77492716,77493076,77497366,77500594 Gene ID= ENSG00000184640.17 TPM= 31.85 Transcript Type= protein_coding chr17 78112918 78128764 78112918 78128764 - transcript5016.chr17.nic@TMC6 transcript5016.chr17.nic protein_coding 78128659,78126777,78126524,78126277,78125726,78125158,78124889,78124524,78123989,78122605,78121556,78121013,78120653,78119297,78118971,78117802,78117468,78117269,78113548,78112918 78128764,78126906,78126648,78126366,78125884,78125263,78124985,78124781,78124179,78122749,78121711,78121164,78120832,78119392,78119046,78117935,78117644,78117347,78113624,78113211 Gene ID= ENSG00000141524.15 TPM= 6.34 Transcript Type= NA chr17 78130786 78142968 78130786 78142968 + ENST00000318430.9@TMC8 ENST00000318430.9 protein_coding 78130786,78131281,78131882,78132359,78132788,78133406,78133853,78134394,78134870,78137235,78137717,78138005,78138349,78138574,78139162,78140834 78130851,78131737,78132030,78132508,78132870,78133542,78134000,78134564,78135009,78137358,78137814,78138188,78138479,78138732,78139240,78142968 Gene ID= ENSG00000167895.14 TPM= 4.53 Transcript Type= protein_coding chr17 78168558 78173527 78168558 78173527 + ENST00000225777.7@SYNGR2 ENST00000225777.7 protein_coding 78168558,78170817,78171510,78171739 78168715,78171054,78171649,78173527 Gene ID= ENSG00000108639.7 TPM= 184.28 Transcript Type= protein_coding chr17 78168611 78172719 78168611 78172719 + ENST00000588282.5@SYNGR2 ENST00000588282.5 protein_coding 78168611,78170817,78171510 78168715,78171054,78172719 Gene ID= ENSG00000108639.7 TPM= 9.51 Transcript Type= protein_coding chr17 78174075 78187233 78174075 78187233 - ENST00000301634.11@TK1 ENST00000301634.11 protein_coding 78186929,78186787,78185055,78182589,78175529,78175050,78174075 78187233,78186818,78185165,78182682,78175618,78175169,78174950 Gene ID= ENSG00000167900.11 TPM= 6.34 Transcript Type= protein_coding chr17 78356778 78360077 78356778 78360077 - ENST00000330871.3@SOCS3 ENST00000330871.3 protein_coding 78359750,78356778 78360077,78359183 Gene ID= ENSG00000184557.4 TPM= 834.91 Transcript Type= protein_coding chr17 78378637 78424656 78378637 78424656 + transcript5050.chr17.nnic@PGS1 transcript5050.chr17.nnic protein_coding 78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78420214,78424061 78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78420323,78424656 Gene ID= ENSG00000087157.18 TPM= 2.81 Transcript Type= NA chr17 78378637 78424658 78378637 78424658 + transcript5055.chr17.nic@PGS1 transcript5055.chr17.nic protein_coding 78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061 78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419725,78424658 Gene ID= ENSG00000087157.18 TPM= 3.71 Transcript Type= NA chr17 78378637 78424658 78378637 78424658 + transcript5056.chr17.nic@PGS1 transcript5056.chr17.nic protein_coding 78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78424061 78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424658 Gene ID= ENSG00000087157.18 TPM= 12.77 Transcript Type= NA chr17 78378637 78424658 78378637 78424658 + transcript5057.chr17.nic@PGS1 transcript5057.chr17.nic protein_coding 78378637,78392476,78396308,78398252,78399348,78400677,78403568,78414952,78419546,78424061 78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419725,78424658 Gene ID= ENSG00000087157.18 TPM= 5.52 Transcript Type= NA chr17 78378637 78424658 78378637 78424658 + transcript5068.chr17.nic@PGS1 transcript5068.chr17.nic protein_coding 78378637,78392476,78398252,78399348,78400677,78403568,78414879,78419546,78424061 78378808,78392665,78398351,78399537,78400855,78404089,78415027,78419675,78424658 Gene ID= ENSG00000087157.18 TPM= 3.71 Transcript Type= NA chr17 78378637 78424658 78378637 78424658 + transcript5069.chr17.nic@PGS1 transcript5069.chr17.nic protein_coding 78378637,78392476,78398252,78399348,78400677,78403568,78414879,78419546,78424061 78378808,78392665,78398351,78399537,78400855,78404089,78415027,78419725,78424658 Gene ID= ENSG00000087157.18 TPM= 2.81 Transcript Type= NA chr17 78378640 78424554 78378640 78424554 + ENST00000262764.10@PGS1 ENST00000262764.10 protein_coding 78378640,78392476,78396308,78398252,78399348,78400677,78403568,78414879,78419546,78424061 78378808,78392665,78396385,78398351,78399537,78400855,78404089,78415027,78419675,78424554 Gene ID= ENSG00000087157.18 TPM= 33.51 Transcript Type= protein_coding chr17 78674049 78782349 78674049 78782349 - transcript5076.chr17.nic@CYTH1 transcript5076.chr17.nic protein_coding 78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78676995,78674049 78782349,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78677050,78676169 Gene ID= ENSG00000108669.16 TPM= 16.3 Transcript Type= NA chr17 78674048 78736892 78674048 78736892 - transcript5079.chr17.nic@CYTH1 transcript5079.chr17.nic protein_coding 78736692,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78674048 78736892,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78676169 Gene ID= ENSG00000108669.16 TPM= 4.83 Transcript Type= NA chr17 78674048 78782294 78674048 78782294 - ENST00000361101.8@CYTH1 ENST00000361101.8 protein_coding 78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698268,78692417,78680971,78680190,78674048 78782294,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692495,78681042,78680344,78676169 Gene ID= ENSG00000108669.16 TPM= 41.05 Transcript Type= protein_coding chr17 78674048 78782272 78674048 78782272 - ENST00000591455.5@CYTH1 ENST00000591455.5 protein_coding 78782202,78709650,78708197,78702538,78702122,78701671,78700331,78698820,78698269,78692417,78680971,78680190,78674048 78782272,78709732,78708261,78702604,78702240,78701751,78700443,78698968,78698380,78692493,78681042,78680344,78676169 Gene ID= ENSG00000108669.16 TPM= 45.58 Transcript Type= protein_coding chr17 78795651 78840862 78795651 78840862 - transcript5085.chr17.nic@USP36 transcript5085.chr17.nic protein_coding 78840736,78838587,78836111,78835280,78828897,78827245,78821937,78820991,78819930,78818667,78814412,78813773,78812860,78806959,78806156,78803385,78802324,78799667,78798908,78798400,78795651 78840862,78838750,78836372,78835501,78829007,78827347,78822004,78821061,78820012,78818778,78814552,78813873,78813001,78807636,78806286,78803978,78802535,78799768,78799023,78798551,78797879 Gene ID= ENSG00000055483.19 TPM= 11.77 Transcript Type= NA chr17 78971238 78980109 78971238 78980109 - ENST00000262776.7@LGALS3BP ENST00000262776.7 protein_coding 78979824,78977140,78975965,78974688,78972970,78971238 78980109,78977214,78976156,78974819,78973222,78972704 Gene ID= ENSG00000108679.12 TPM= 1848.37 Transcript Type= protein_coding chr17 78971238 78979918 78971238 78979918 - ENST00000591778.5@LGALS3BP ENST00000591778.5 protein_coding 78979824,78977140,78975965,78974688,78971238 78979918,78977214,78976156,78974819,78972704 Gene ID= ENSG00000108679.12 TPM= 23.54 Transcript Type= protein_coding chr17 78991715 79009791 78991715 79009791 - transcript5114.chr17.nic@CANT1 transcript5114.chr17.nic protein_coding 79009664,79005372,79000100,78997840,78996992,78995018,78991715 79009791,79005481,79000270,78997963,78997644,78995221,78993920 Gene ID= ENSG00000171302.16 TPM= 2.72 Transcript Type= NA chr17 78991717 79009817 78991717 79009817 - transcript5117.chr17.nic@CANT1 transcript5117.chr17.nic protein_coding 79009664,79000100,78997840,78996992,78995018,78992410,78991717 79009817,79000270,78997963,78997644,78995221,78993920,78992140 Gene ID= ENSG00000171302.16 TPM= 2.72 Transcript Type= NA chr17 78991715 79009817 78991715 79009817 - transcript5119.chr17.nic@CANT1 transcript5119.chr17.nic protein_coding 79009664,79000100,78997840,78996992,78995018,78991715 79009817,79000270,78997963,78997644,78995221,78993920 Gene ID= ENSG00000171302.16 TPM= 16.3 Transcript Type= NA chr17 78991715 79009791 78991715 79009791 - transcript5120.chr17.nic@CANT1 transcript5120.chr17.nic protein_coding 79009664,79005372,78997840,78996992,78995018,78991715 79009791,79005481,78997963,78997644,78995221,78993920 Gene ID= ENSG00000171302.16 TPM= 5.43 Transcript Type= NA chr17 78991715 79009775 78991715 79009775 - transcript5133.chr17.nic@CANT1 transcript5133.chr17.nic protein_coding 79009664,78996992,78995018,78991715 79009775,78997644,78995221,78993920 Gene ID= ENSG00000171302.16 TPM= 2.72 Transcript Type= NA chr17 78991717 79009817 78991717 79009817 - ENST00000302345.6@CANT1 ENST00000302345.6 protein_coding 79009664,78996992,78995018,78991717 79009817,78997963,78995221,78993920 Gene ID= ENSG00000171302.16 TPM= 14.49 Transcript Type= protein_coding chr17 78991717 79009730 78991717 79009730 - ENST00000392446.9@CANT1 ENST00000392446.9 protein_coding 79009664,78997840,78996992,78995018,78991717 79009730,78997963,78997644,78995221,78993920 Gene ID= ENSG00000171302.16 TPM= 18.11 Transcript Type= protein_coding chr17 79018175 79027674 79018175 79027674 - transcript5135.chr17.nnic@C1QTNF1-AS1 transcript5135.chr17.nnic antisense_RNA 79027376,79020355,79020006,79018175 79027674,79020424,79020236,79019616 Gene ID= ENSG00000265096.1 TPM= 3.62 Transcript Type= NA chr17 79019209 79027601 79019209 79027601 - ENST00000581579.1@C1QTNF1-AS1 ENST00000581579.1 antisense_RNA 79027376,79020006,79019209 79027601,79020236,79019616 Gene ID= ENSG00000265096.1 TPM= 3.62 Transcript Type= antisense_RNA chr17 79024169 79049790 79024169 79049790 + transcript5130.chr17.nic@C1QTNF1 transcript5130.chr17.nic protein_coding 79024169,79024862,79043955,79046555,79047538 79024494,79025935,79044123,79046694,79049790 Gene ID= ENSG00000173918.14 TPM= 4.15 Transcript Type= NA chr17 79024171 79049787 79024171 79049787 + ENST00000339142.6@C1QTNF1 ENST00000339142.6 protein_coding 79024171,79034317,79043955,79046555,79047538 79024494,79034533,79044123,79046694,79049787 Gene ID= ENSG00000173918.14 TPM= 7.47 Transcript Type= protein_coding chr17 79024070 79048475 79024070 79048475 + ENST00000579760.5@C1QTNF1 ENST00000579760.5 protein_coding 79024070,79043955,79046555,79047538 79024494,79044123,79046694,79048475 Gene ID= ENSG00000173918.14 TPM= 3.62 Transcript Type= protein_coding chr17 79024261 79049787 79024261 79049787 + ENST00000311661.4@C1QTNF1 ENST00000311661.4 protein_coding 79024261,79046555,79047538 79024494,79046694,79049787 Gene ID= ENSG00000173918.14 TPM= 5.36 Transcript Type= protein_coding chr17 79025663 79049788 79025663 79049788 + ENST00000392445.6@C1QTNF1 ENST00000392445.6 protein_coding 79025663,79043955,79046555,79047538 79025935,79044123,79046694,79049788 Gene ID= ENSG00000173918.14 TPM= 7.47 Transcript Type= protein_coding chr17 79074902 79088601 79074902 79088601 + transcript5153.chr17.nnic@ENGASE transcript5153.chr17.nnic protein_coding 79074902,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933,79087751 79075090,79077497,79077864,79079637,79080364,79081073,79082877,79083123,79083590,79083951,79084686,79085342,79085734,79087365,79088601 Gene ID= ENSG00000167280.16 TPM= 10.71 Transcript Type= NA chr17 79074825 79088597 79074825 79088597 + transcript5158.chr17.nic@ENGASE transcript5158.chr17.nic protein_coding 79074825,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933 79075090,79077497,79077864,79079637,79080364,79081073,79082877,79083123,79083590,79083951,79084686,79085342,79085734,79088597 Gene ID= ENSG00000167280.16 TPM= 17.96 Transcript Type= NA chr17 79074939 79088601 79074939 79088601 + transcript5160.chr17.nnic@ENGASE transcript5160.chr17.nnic protein_coding 79074939,79077430,79077663,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933,79087751 79075090,79077497,79077864,79080364,79081073,79082877,79083123,79083590,79083951,79084686,79085342,79085734,79087365,79088601 Gene ID= ENSG00000167280.16 TPM= 5.73 Transcript Type= NA chr17 79074945 79086696 79074945 79086696 + ENST00000579016.5@ENGASE ENST00000579016.5 protein_coding 79074945,79077430,79077663,79079489,79080207,79080925,79081898,79083020,79083482,79083761,79084538,79085234,79085620,79085933 79075090,79077497,79077864,79079637,79080364,79081073,79082063,79083123,79083590,79083951,79084686,79085342,79085734,79086696 Gene ID= ENSG00000167280.16 TPM= 12.68 Transcript Type= protein_coding chr17 79778132 79787983 79778132 79787983 + ENST00000310942.8@CBX2 ENST00000310942.8 protein_coding 79778132,79778384,79779362,79781696,79783732 79778307,79778427,79779427,79781801,79787983 Gene ID= ENSG00000173894.10 TPM= 2.72 Transcript Type= protein_coding chr17 79792132 79797116 79792132 79797116 - ENST00000269385.8@CBX8 ENST00000269385.8 protein_coding 79796930,79796497,79796250,79796057,79792132 79797116,79796540,79796315,79796123,79795558 Gene ID= ENSG00000141570.10 TPM= 3.62 Transcript Type= protein_coding chr17 79833156 79839429 79833156 79839429 - ENST00000269397.8@CBX4 ENST00000269397.8 protein_coding 79839183,79839011,79837837,79835646,79833156 79839429,79839054,79837902,79835712,79835395 Gene ID= ENSG00000141582.14 TPM= 52.52 Transcript Type= protein_coding chr17 79940022 80035887 79940022 80035887 - transcript5175.chr17.nnic@TBC1D16 transcript5175.chr17.nnic protein_coding 80035795,80013367,80010160,79952657,79951450,79950411,79949717,79948872,79947645,79944908,79942060,79940859,79940022 80035887,80013609,80010757,79952818,79951597,79950578,79949865,79949006,79947831,79945087,79942206,79941107,79940694 Gene ID= ENSG00000167291.15 TPM= 2.72 Transcript Type= NA chr17 79935799 80035887 79935799 80035887 - transcript5177.chr17.nic@TBC1D16 transcript5177.chr17.nic protein_coding 80035795,80013367,80010160,79952657,79951450,79950411,79949717,79948872,79947645,79944908,79942060,79935799 80035887,80013609,80010757,79952818,79951597,79950575,79949865,79949006,79947831,79945087,79942206,79941107 Gene ID= ENSG00000167291.15 TPM= 2.26 Transcript Type= NA chr17 79932343 80035848 79932343 80035848 - ENST00000310924.6@TBC1D16 ENST00000310924.6 protein_coding 80035795,80013367,80010160,79952657,79951450,79950411,79949717,79948872,79947645,79944908,79942060,79932343 80035848,80013609,80010757,79952818,79951597,79950578,79949865,79949006,79947831,79945087,79942206,79941107 Gene ID= ENSG00000167291.15 TPM= 14.04 Transcript Type= protein_coding chr17 80036631 80066747 80036631 80066747 + transcript5186.chr17.nnic@CCDC40 transcript5186.chr17.nnic protein_coding 80036631,80038123,80039812,80047279,80048583,80049906,80050064,80058494,80058858,80065485,80065924 80036691,80038186,80040270,80047402,80048761,80049989,80050283,80058651,80058980,80065606,80066747 Gene ID= ENSG00000141519.14 TPM= 1.81 Transcript Type= NA chr17 80101551 80119882 80101551 80119882 + transcript5195.chr17.nic@GAA transcript5195.chr17.nic protein_coding 80101551,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272 80101625,80101925,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119882 Gene ID= ENSG00000171298.12 TPM= 18.87 Transcript Type= NA chr17 80101520 80119882 80101520 80119882 + transcript5198.chr17.nic@GAA transcript5198.chr17.nic protein_coding 80101520,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272 80101625,80101890,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119882 Gene ID= ENSG00000171298.12 TPM= 9.27 Transcript Type= NA chr17 80101520 80119882 80101520 80119882 + transcript5199.chr17.nic@GAA transcript5199.chr17.nic protein_coding 80101520,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272 80101625,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119882 Gene ID= ENSG00000171298.12 TPM= 56 Transcript Type= NA chr17 80101594 80119877 80101594 80119877 + ENST00000390015.7@GAA ENST00000390015.7 protein_coding 80101594,80101811,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272 80101625,80101890,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119877 Gene ID= ENSG00000171298.12 TPM= 203.6 Transcript Type= protein_coding chr17 80101597 80102733 80101597 80102733 + ENST00000574376.1@GAA ENST00000574376.1 protein_coding 80101597,80101811 80101625,80102733 Gene ID= ENSG00000171298.12 TPM= 2.72 Transcript Type= processed_transcript chr17 80101704 80119879 80101704 80119879 + ENST00000302262.7@GAA ENST00000302262.7 protein_coding 80101704,80104555,80105749,80107557,80107800,80108290,80108489,80108697,80109945,80110727,80110941,80111983,80112578,80112876,80113218,80116968,80117600,80118193,80118653,80119272 80101890,80105132,80105894,80107722,80107896,80108409,80108607,80108828,80110055,80110840,80111025,80112100,80112711,80113027,80113366,80117109,80117749,80118357,80118805,80119879 Gene ID= ENSG00000171298.12 TPM= 33.36 Transcript Type= protein_coding chr17 80135214 80147183 80135214 80147183 - ENST00000269349.7@EIF4A3 ENST00000269349.7 protein_coding 80146793,80144172,80141782,80141319,80140008,80139670,80139021,80138142,80137386,80136228,80136004,80135214 80147183,80144244,80141848,80141381,80140140,80139750,80139162,80138280,80137501,80136335,80136131,80135506 Gene ID= ENSG00000141543.9 TPM= 144.89 Transcript Type= protein_coding chr17 80209277 80220359 80209277 80220359 - transcript5270.chr17.nnic@SGSH transcript5270.chr17.nnic protein_coding 80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209277 80220359,80217192,80215138,80214765,80214328,80213885,80212274,80210733 Gene ID= ENSG00000181523.12 TPM= 6.98 Transcript Type= NA chr17 80209277 80220333 80209277 80220333 - transcript5271.chr17.nic@SGSH transcript5271.chr17.nic protein_coding 80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209277 80220333,80217192,80215138,80214765,80214328,80213885,80212274,80211923 Gene ID= ENSG00000181523.12 TPM= 11.69 Transcript Type= NA chr17 80209290 80220760 80209290 80220760 - transcript5280.chr17.nic@SGSH transcript5280.chr17.nic protein_coding 80220226,80217032,80215033,80214615,80214172,80213804,80209290 80220760,80217192,80215138,80214765,80214328,80213885,80212274 Gene ID= ENSG00000181523.12 TPM= 22.94 Transcript Type= NA chr17 80209264 80220400 80209264 80220400 - ENST00000326317.10@SGSH ENST00000326317.10 protein_coding 80220226,80217032,80215033,80214615,80214172,80213804,80212071,80209264 80220400,80217192,80215138,80214765,80214328,80213885,80212274,80211011 Gene ID= ENSG00000181523.12 TPM= 152.66 Transcript Type= protein_coding chr17 80219679 80253513 80219679 80253513 + transcript5226.chr17.nic@SLC26A11 transcript5226.chr17.nic protein_coding 80219679,80220916,80221548,80222655,80223180,80225837,80227818,80236928,80237522,80241771,80245196,80246154,80246509,80248130,80248575,80249154,80251329,80252625 80220496,80221115,80221794,80222847,80223337,80225916,80227960,80237103,80237594,80241821,80245256,80246209,80246649,80248257,80248674,80249287,80251401,80253513 Gene ID= ENSG00000181045.14 TPM= 23.47 Transcript Type= NA chr17 80220438 80253498 80220438 80253498 + ENST00000411502.7@SLC26A11 ENST00000411502.7 protein_coding 80220438,80220919,80221548,80222655,80223252,80225837,80227818,80236928,80237522,80241771,80245196,80246154,80246509,80248130,80248575,80249154,80251329,80252625 80220496,80221115,80221794,80222847,80223337,80225916,80227960,80237103,80237594,80241821,80245256,80246209,80246649,80248257,80248674,80249287,80251401,80253498 Gene ID= ENSG00000181045.14 TPM= 15.32 Transcript Type= protein_coding chr17 80260854 80320249 80260854 80320249 + transcript5287.chr17.nnic@RNF213 transcript5287.chr17.nnic protein_coding 80260854,80263663,80273241,80287815,80288633,80289659,80290570,80291628,80294720,80295557,80298321,80306252,80307128,80309018,80313012,80317188,80319190 80260902,80263778,80273404,80288363,80288755,80289837,80290728,80291827,80295003,80295813,80298518,80306468,80307201,80309171,80313167,80317277,80320249 Gene ID= ENSG00000173821.19 TPM= 1.81 Transcript Type= NA chr17 80346876 80393797 80346876 80393797 + transcript5288.chr17.nic@RNF213 transcript5288.chr17.nic protein_coding 80346876,80349770,80350301,80351685,80352940,80353512,80354019,80354441,80358288,80360061,80361734,80363102,80363609,80364433,80367748,80367961,80369502,80369768,80371874,80372521,80372975,80374458,80375760,80376301,80376882,80377762,80379620,80380831,80381547,80382979,80383677,80385039,80385538,80386250,80386690,80388612,80389173,80389828,80390012,80393345 80348286,80349906,80350396,80351803,80353059,80353666,80354166,80354576,80358479,80360206,80361888,80363314,80363790,80364553,80367848,80368143,80369671,80369867,80371985,80372734,80373165,80374589,80375870,80376543,80376963,80377796,80379714,80380987,80381727,80383070,80383928,80385171,80385621,80386430,80386891,80388689,80389367,80389917,80390196,80393797 Gene ID= ENSG00000173821.19 TPM= 4.53 Transcript Type= NA chr17 80415150 80430370 80415150 80430370 + transcript5297.chr17.nic@ENDOV transcript5297.chr17.nic protein_coding 80415150,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80430041 80415250,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80430370 Gene ID= ENSG00000173818.16 TPM= 3.17 Transcript Type= NA chr17 80415463 80438084 80415463 80438084 + transcript5300.chr17.nic@ENDOV transcript5300.chr17.nic protein_coding 80415463,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80436133 80415518,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438084 Gene ID= ENSG00000173818.16 TPM= 1.97 Transcript Type= NA chr17 80415184 80438084 80415184 80438084 + transcript5303.chr17.nic@ENDOV transcript5303.chr17.nic protein_coding 80415184,80422206,80423520,80425032,80425492,80428596,80429773,80436133 80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438084 Gene ID= ENSG00000173818.16 TPM= 1.97 Transcript Type= NA chr17 80415452 80438086 80415452 80438086 + ENST00000517795.5@ENDOV ENST00000517795.5 protein_coding 80415452,80423520,80425032,80425492,80428596,80429773,80436133 80415610,80423632,80425100,80425620,80428660,80429831,80438086 Gene ID= ENSG00000173818.16 TPM= 1.06 Transcript Type= protein_coding chr17 80415167 80438081 80415167 80438081 + ENST00000520367.5@ENDOV ENST00000520367.5 protein_coding 80415167,80415650,80422206,80423520,80425032,80425492,80428596,80429773,80436133 80415250,80415821,80422245,80423632,80425100,80425620,80428660,80429831,80438081 Gene ID= ENSG00000173818.16 TPM= 12.83 Transcript Type= protein_coding chr17 80415167 80438081 80415167 80438081 + ENST00000518137.5@ENDOV ENST00000518137.5 protein_coding 80415167,80415650,80421828,80422206,80423520,80425032,80425492,80428596,80429773,80436133 80415250,80415821,80421962,80422245,80423632,80425100,80425620,80428660,80429831,80438081 Gene ID= ENSG00000173818.16 TPM= 6.49 Transcript Type= protein_coding chr17 80415184 80430343 80415184 80430343 + ENST00000323854.9@ENDOV ENST00000323854.9 protein_coding 80415184,80415650,80422206,80423520,80425032,80425492,80428596,80429773 80415250,80415821,80422245,80423632,80425100,80425620,80428660,80430343 Gene ID= ENSG00000173818.16 TPM= 1.36 Transcript Type= protein_coding chr17 80415487 80438082 80415487 80438082 + ENST00000518901.5@ENDOV ENST00000518901.5 protein_coding 80415487,80422206,80423520,80425032,80425492,80428596,80429773,80436133 80415610,80422245,80423632,80425100,80425620,80428660,80429831,80438082 Gene ID= ENSG00000173818.16 TPM= 1.06 Transcript Type= protein_coding chr17 80467148 80476604 80467148 80476604 - ENST00000306773.4@NPTX1 ENST00000306773.4 protein_coding 80476003,80475511,80473200,80471732,80467148 80476604,80475718,80473444,80471911,80471034 Gene ID= ENSG00000171246.5 TPM= 14.49 Transcript Type= protein_coding chr17 80544832 80966369 80544832 80966369 + transcript5309.chr17.nnic@RPTOR transcript5309.chr17.nnic protein_coding 80544832,80625691,80643728,80707841,80730560,80754010,80791450,80822201,80823079,80837922,80846473,80855464,80857790,80880415,80883419,80883781,80885008,80891720,80892729,80893707,80908811,80922724,80923490,80940496,80945667,80947227,80949443,80957624,80960078,80961394,80962461,80962928,80964262 80545791,80625793,80643810,80707999,80730706,80754185,80791509,80822301,80823223,80837997,80846574,80855547,80857900,80880489,80883484,80883972,80885148,80891837,80892869,80893865,80908929,80922827,80923673,80940601,80945781,80947351,80949547,80957730,80960205,80961480,80962577,80963057,80966369 Gene ID= ENSG00000141564.13 TPM= 1.81 Transcript Type= NA chr17 80948959 80966252 80948959 80966252 + transcript5312.chr17.nnic@RPTOR transcript5312.chr17.nnic protein_coding 80948959,80949443,80957624,80960078,80961394,80962461,80962928,80964262 80949053,80949547,80957730,80960205,80961480,80962577,80963057,80966252 Gene ID= ENSG00000141564.13 TPM= 3.62 Transcript Type= NA chr17 80991882 81000132 80991882 81000132 + transcript5315.chr17.nnic@CHMP6 transcript5315.chr17.nnic protein_coding 80991882,80994581,80995019,80995672,80997007,80997261,80998366,80999098 80992611,80994690,80995106,80995758,80997072,80997341,80998420,81000132 Gene ID= ENSG00000176108.9 TPM= 1.81 Transcript Type= NA chr17 80991841 81000133 80991841 81000133 + ENST00000325167.9@CHMP6 ENST00000325167.9 protein_coding 80991841,80994581,80995019,80995672,80997007,80997261,80998366,80999098 80991981,80994690,80995106,80995758,80997072,80997341,80998420,81000133 Gene ID= ENSG00000176108.9 TPM= 72.44 Transcript Type= protein_coding chr17 81029136 81034874 81029136 81034874 - transcript5318.chr17.nnic@BAIAP2-AS1 transcript5318.chr17.nnic lincRNA 81034565,81031786,81029136 81034874,81033398,81031197 Gene ID= ENSG00000226137.5 TPM= 4.53 Transcript Type= NA chr17 81035151 81116225 81035151 81116225 + ENST00000428708.6@BAIAP2 ENST00000428708.6 protein_coding 81035151,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81115770 81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81116225 Gene ID= ENSG00000175866.15 TPM= 7.24 Transcript Type= protein_coding chr17 81097573 81109354 81097573 81109354 + transcript5327.chr17.nic@BAIAP2 transcript5327.chr17.nic protein_coding 81097573,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81108968 81097696,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81109354 Gene ID= ENSG00000175866.15 TPM= 1.81 Transcript Type= NA chr17 81035162 81116224 81035162 81116224 + ENST00000435091.7@BAIAP2 ENST00000435091.7 protein_coding 81035162,81053668,81057881,81084832,81085654,81086443,81099928,81103502,81103907,81104514,81106078,81106745,81108475,81110914,81115770 81035308,81053743,81057967,81084893,81085725,81086580,81100080,81103723,81104108,81104715,81106146,81106907,81108509,81110959,81116224 Gene ID= ENSG00000175866.15 TPM= 1.81 Transcript Type= protein_coding chr17 81189591 81223018 81189591 81223018 - transcript5342.chr17.nic@CEP131 transcript5342.chr17.nic protein_coding 81222769,81219880,81208928,81207125,81206744,81203494,81202240,81200329,81199719,81199381,81198877,81198106,81197712,81196930,81196701,81195835,81194870,81193926,81192736,81192476,81192318,81191193,81190907,81190639,81189915,81189591 81223018,81220073,81209022,81207239,81206871,81203607,81202398,81200446,81199835,81199549,81198971,81198297,81197888,81197055,81196826,81195951,81194972,81194127,81192843,81192593,81192392,81191350,81191084,81190802,81189975,81189843 Gene ID= ENSG00000141577.13 TPM= 1.81 Transcript Type= NA chr17 81189596 81222999 81189596 81222999 - ENST00000269392.8@CEP131 ENST00000269392.8 protein_coding 81222769,81219880,81208928,81207125,81206744,81203494,81202240,81200329,81199719,81199381,81198877,81198106,81197712,81196930,81196701,81195835,81194870,81193926,81192736,81192476,81192318,81191193,81190907,81190639,81189915,81189596 81222999,81220073,81209022,81207239,81206871,81203607,81202398,81200446,81199835,81199549,81198971,81198297,81197888,81197055,81196826,81195951,81194972,81194127,81192843,81192593,81192392,81191335,81191084,81190802,81189975,81189843 Gene ID= ENSG00000141577.13 TPM= 22.64 Transcript Type= protein_coding chr17 81189593 81222945 81189593 81222945 - ENST00000374782.7@CEP131 ENST00000374782.7 protein_coding 81222769,81219880,81208928,81207125,81206744,81203494,81202240,81200329,81199719,81199381,81198877,81198115,81197712,81196930,81196701,81195835,81194870,81193926,81192476,81192318,81191193,81190907,81190639,81189915,81189593 81222945,81220073,81209022,81207239,81206871,81203607,81202398,81200446,81199835,81199549,81198971,81198297,81197888,81197055,81196826,81195951,81194972,81194127,81192593,81192392,81191335,81191084,81190802,81189975,81189843 Gene ID= ENSG00000141577.13 TPM= 1.81 Transcript Type= protein_coding chr17 81228279 81239062 81228279 81239062 - transcript5358.chr17.nic@TEPSIN transcript5358.chr17.nic protein_coding 81238514,81237387,81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231578,81231398,81230544,81228279 81239062,81238159,81237071,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81231476,81230678,81229476 Gene ID= ENSG00000167302.10 TPM= 3.17 Transcript Type= NA chr17 81228279 81239057 81228279 81239057 - transcript5362.chr17.nic@TEPSIN transcript5362.chr17.nic protein_coding 81237387,81236980,81236708,81233981,81233638,81233432,81232315,81231847,81231398,81230544,81228279 81239057,81237071,81236801,81234048,81233716,81233503,81232518,81232021,81231691,81230678,81229476 Gene ID= ENSG00000167302.10 TPM= 4.98 Transcript Type= NA chr17 81239239 81241281 81239239 81241281 + ENST00000431388.2@NDUFAF8 ENST00000431388.2 protein_coding 81239239,81239568,81240987 81239447,81239678,81241281 Gene ID= ENSG00000224877.3 TPM= 41.66 Transcript Type= protein_coding chr17 81245000 81295305 81245000 81295305 - ENST00000374759.7@SLC38A10 ENST00000374759.7 protein_coding 81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251493,81246885,81245000 81295305,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612,81247061,81246673 Gene ID= ENSG00000157637.12 TPM= 330.71 Transcript Type= protein_coding chr17 81251196 81295267 81251196 81295267 - ENST00000288439.9@SLC38A10 ENST00000288439.9 protein_coding 81294823,81289691,81284850,81283409,81282189,81280609,81277031,81275969,81272516,81270918,81260238,81253073,81252195,81251196 81295267,81289808,81284895,81283502,81282332,81280733,81277133,81276151,81272627,81271024,81260394,81253240,81252683,81251612 Gene ID= ENSG00000157637.12 TPM= 2.72 Transcript Type= protein_coding chr17 81461068 81466330 81461068 81466330 + transcript5397.chr17.nic@BAHCC1 transcript5397.chr17.nic protein_coding 81461068,81462740,81463611 81462046,81462976,81466330 Gene ID= ENSG00000266074.8 TPM= 3.62 Transcript Type= NA chr17 81509971 81512874 81509971 81512874 - ENST00000331925.6@ACTG1 ENST00000331925.6 protein_coding 81512734,81512232,81511903,81511188,81510927,81509971 81512874,81512360,81512142,81511626,81511108,81510833 Gene ID= ENSG00000184009.9 TPM= 2039.35 Transcript Type= protein_coding chr17 81509973 81512755 81509973 81512755 - ENST00000615544.4@ACTG1 ENST00000615544.4 protein_coding 81512734,81512232,81511903,81511188,81510927,81510480,81509973 81512755,81512360,81512142,81511626,81511108,81510833,81510329 Gene ID= ENSG00000184009.9 TPM= 29.34 Transcript Type= protein_coding chr17 81509988 81512780 81509988 81512780 - ENST00000573283.5@ACTG1 ENST00000573283.5 protein_coding 81512615,81512232,81511903,81511188,81510927,81509988 81512780,81512360,81512142,81511626,81511108,81510833 Gene ID= ENSG00000184009.9 TPM= 22.7 Transcript Type= protein_coding chr17 81509989 81512781 81509989 81512781 - ENST00000575842.5@ACTG1 ENST00000575842.5 protein_coding 81512232,81511903,81511188,81510927,81509989 81512781,81512142,81511626,81511108,81510833 Gene ID= ENSG00000184009.9 TPM= 5.95 Transcript Type= protein_coding chr17 81510008 81512790 81510008 81512790 - ENST00000575087.5@ACTG1 ENST00000575087.5 protein_coding 81512606,81512232,81511903,81511188,81510927,81510008 81512790,81512360,81512142,81511626,81511108,81510833 Gene ID= ENSG00000184009.9 TPM= 1.72 Transcript Type= protein_coding chr17 81539886 81548498 81539886 81548498 - ENST00000425898.2@FAAP100 ENST00000425898.2 protein_coding 81546909,81545746,81544004,81541309,81539886 81548498,81545882,81544120,81541395,81540950 Gene ID= ENSG00000185504.16 TPM= 3.92 Transcript Type= protein_coding chr17 81539885 81552377 81539885 81552377 - ENST00000327787.12@FAAP100 ENST00000327787.12 protein_coding 81552166,81551928,81550248,81549206,81546909,81545746,81544004,81541309,81539885 81552377,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950 Gene ID= ENSG00000185504.16 TPM= 48.75 Transcript Type= protein_coding chr17 81539885 81552376 81539885 81552376 - ENST00000443656.6@FAAP100 ENST00000443656.6 protein_coding 81552166,81551732,81550248,81549206,81546909,81545746,81544004,81541309,81539885 81552376,81552052,81551203,81549362,81547678,81545882,81544120,81541395,81540950 Gene ID= ENSG00000185504.16 TPM= 15.24 Transcript Type= nonsense_mediated_decay chr17 81556889 81637112 81556889 81637112 - transcript5415.chr17.nnic@NPLOC4 transcript5415.chr17.nnic protein_coding 81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81572017,81569016,81567417,81565505,81560562,81556889 81637112,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81572088,81569111,81567533,81565607,81560676,81559416 Gene ID= ENSG00000182446.13 TPM= 18.56 Transcript Type= NA chr17 81556887 81637146 81556887 81637146 - ENST00000331134.10@NPLOC4 ENST00000331134.10 protein_coding 81636916,81629725,81622166,81613318,81610210,81608728,81606691,81604548,81600341,81597245,81596116,81588944,81572017,81569016,81567417,81565505,81556887 81637146,81629805,81622278,81613494,81610258,81608822,81606814,81604727,81600427,81597316,81596242,81589104,81572088,81569111,81567533,81565607,81559416 Gene ID= ENSG00000182446.13 TPM= 83.76 Transcript Type= protein_coding chr17 81637171 81639177 81637171 81639177 + ENST00000571914.1@TSPAN10 ENST00000571914.1 protein_coding 81637171,81637518 81637406,81639177 Gene ID= ENSG00000182612.10 TPM= 4.53 Transcript Type= processed_transcript chr17 81665036 81666588 81665036 81666588 - ENST00000374741.3@OXLD1 ENST00000374741.3 protein_coding 81666518,81665036 81666588,81665584 Gene ID= ENSG00000204237.4 TPM= 10.87 Transcript Type= protein_coding chr17 81666751 81673930 81666751 81673930 + transcript5438.chr17.nic@CCDC137 transcript5438.chr17.nic protein_coding 81666751,81667729,81670225,81671744,81672076,81672495 81667007,81667862,81670453,81671826,81672155,81673930 Gene ID= ENSG00000185298.12 TPM= 5.89 Transcript Type= NA chr17 81666752 81673904 81666752 81673904 + ENST00000575223.5@CCDC137 ENST00000575223.5 protein_coding 81666752,81667729,81670225,81671744,81672076,81672495,81672966 81666900,81667862,81670453,81671826,81672155,81672768,81673904 Gene ID= ENSG00000185298.12 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr17 81681220 81683743 81681220 81683743 - ENST00000571082.5@ARL16 ENST00000571082.5 protein_coding 81683693,81683536,81683013,81682034,81681220 81683743,81683594,81683126,81682675,81681879 Gene ID= ENSG00000214087.8 TPM= 3.62 Transcript Type= retained_intron chr17 81683932 81702119 81683932 81702119 + ENST00000329138.8@HGS ENST00000329138.8 protein_coding 81683932,81685605,81686312,81687003,81688704,81690182,81690674,81691447,81693503,81693654,81693870,81694815,81694924,81695164,81695786,81696357,81696607,81696824,81700467,81700695,81701045,81701508 81684103,81685689,81686387,81687095,81688827,81690234,81690742,81691571,81693581,81693752,81693965,81694853,81695067,81695223,81695999,81696529,81696747,81696998,81700600,81700814,81701131,81702119 Gene ID= ENSG00000185359.12 TPM= 166.77 Transcript Type= protein_coding chr17 81703357 81707526 81703357 81707526 + ENST00000333676.7@MRPL12 ENST00000333676.7 protein_coding 81703357,81704244,81704633,81706906,81707124 81703575,81704430,81704716,81707040,81707526 Gene ID= ENSG00000262814.7 TPM= 68.82 Transcript Type= protein_coding chr17 81711948 81721996 81711948 81721996 + transcript5475.chr17.nnic@SLC25A10 transcript5475.chr17.nnic protein_coding 81711948,81714953,81715478,81715693,81716009,81716812,81717002,81717399,81717784,81719831,81719976,81721640 81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721473,81721996 Gene ID= ENSG00000183048.11 TPM= 41.66 Transcript Type= NA chr17 81712307 81721012 81712307 81721012 + ENST00000331531.9@SLC25A10 ENST00000331531.9 protein_coding 81712307,81714953,81715478,81715693,81716009,81716812,81717002,81717399,81717757,81719831,81719976 81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721012 Gene ID= ENSG00000183048.11 TPM= 3.17 Transcript Type= protein_coding chr17 81712341 81721012 81712341 81721012 + ENST00000350690.9@SLC25A10 ENST00000350690.9 protein_coding 81712341,81714953,81715478,81715693,81716009,81716812,81717002,81717399,81717784,81719831,81719976 81712519,81715072,81715592,81715741,81716050,81716855,81717072,81717491,81717861,81719887,81721012 Gene ID= ENSG00000183048.11 TPM= 12.22 Transcript Type= protein_coding chr17 81822417 81833291 81822417 81833291 - ENST00000538396.5@MCRIP1 ENST00000538396.5 protein_coding 81833238,81824499,81824287,81823412,81823209,81822417 81833291,81824554,81824405,81823513,81823311,81822907 Gene ID= ENSG00000225663.7 TPM= 16.83 Transcript Type= protein_coding chr17 81822411 81833268 81822411 81833268 - ENST00000455127.6@MCRIP1 ENST00000455127.6 protein_coding 81833238,81824499,81824287,81823412,81822411 81833268,81824554,81824405,81823513,81823311 Gene ID= ENSG00000225663.7 TPM= 85.65 Transcript Type= protein_coding chr17 81822429 81833302 81822429 81833302 - ENST00000573478.5@MCRIP1 ENST00000573478.5 protein_coding 81833238,81824499,81824287,81822429 81833302,81824554,81824405,81823311 Gene ID= ENSG00000225663.7 TPM= 2.94 Transcript Type= protein_coding chr17 81822417 81833268 81822417 81833268 - ENST00000572645.5@MCRIP1 ENST00000572645.5 protein_coding 81833238,81826380,81824499,81824287,81823412,81823209,81822417 81833268,81826515,81824554,81824405,81823513,81823311,81822907 Gene ID= ENSG00000225663.7 TPM= 1.43 Transcript Type= protein_coding chr17 81843159 81860694 81843159 81860694 - ENST00000331483.8@P4HB ENST00000331483.8 protein_coding 81860327,81859181,81855453,81855142,81847243,81846947,81846429,81845871,81845561,81845144,81843159 81860694,81859387,81855586,81855279,81847347,81847072,81846629,81845991,81845742,81845230,81844092 Gene ID= ENSG00000185624.14 TPM= 2495.53 Transcript Type= protein_coding chr17 81843161 81860566 81843161 81860566 - ENST00000575069.5@P4HB ENST00000575069.5 protein_coding 81860347,81859181,81855453,81855142,81847243,81846947,81846429,81845871,81845561,81845144,81843161 81860566,81859387,81855586,81855279,81847347,81847072,81846629,81845991,81845742,81845230,81844092 Gene ID= ENSG00000185624.14 TPM= 41.5 Transcript Type= nonsense_mediated_decay chr17 81867719 81871406 81867719 81871406 - transcript5501.chr17.nnic@ARHGDIA transcript5501.chr17.nnic protein_coding 81871298,81869741,81869542,81869330,81869173,81869048,81867719 81871406,81869957,81869625,81869406,81869236,81869075,81868969 Gene ID= ENSG00000141522.11 TPM= 4.98 Transcript Type= NA chr17 81867721 81871406 81867721 81871406 - ENST00000269321.11@ARHGDIA ENST00000269321.11 protein_coding 81871298,81869741,81869542,81869330,81869173,81867721 81871406,81869957,81869625,81869406,81869236,81869075 Gene ID= ENSG00000141522.11 TPM= 211.44 Transcript Type= protein_coding chr17 81887844 81891586 81887844 81891586 - ENST00000505490.2@ALYREF ENST00000505490.2 protein_coding 81891323,81890689,81889182,81888520,81888241,81887844 81891586,81890820,81889329,81888583,81888418,81888145 Gene ID= ENSG00000183684.7 TPM= 25.36 Transcript Type= protein_coding chr17 81891721 81900533 81891721 81900533 + ENST00000344877.9@ANAPC11 ENST00000344877.9 protein_coding 81891721,81893552,81894467,81899920 81891841,81893614,81894586,81900533 Gene ID= ENSG00000141552.17 TPM= 35.7 Transcript Type= protein_coding chr17 81891720 81900252 81891720 81900252 + ENST00000579978.5@ANAPC11 ENST00000579978.5 protein_coding 81891720,81894467,81899920 81891841,81894586,81900252 Gene ID= ENSG00000141552.17 TPM= 34.8 Transcript Type= protein_coding chr17 81891723 81900356 81891723 81900356 + ENST00000571024.6@ANAPC11 ENST00000571024.6 protein_coding 81891723,81894467,81899920 81891833,81894586,81900356 Gene ID= ENSG00000141552.17 TPM= 45.82 Transcript Type= protein_coding chr17 81891732 81900356 81891732 81900356 + ENST00000574924.6@ANAPC11 ENST00000574924.6 protein_coding 81891732,81893552,81894467,81899920 81891833,81893614,81894586,81900356 Gene ID= ENSG00000141552.17 TPM= 27.94 Transcript Type= protein_coding chr17 81891735 81900356 81891735 81900356 + ENST00000572851.6@ANAPC11 ENST00000572851.6 protein_coding 81891735,81894467,81899920 81891863,81894586,81900356 Gene ID= ENSG00000141552.17 TPM= 9.6 Transcript Type= protein_coding chr17 81891723 81900253 81891723 81900253 + ENST00000577425.5@ANAPC11 ENST00000577425.5 protein_coding 81891723,81894467,81899920 81891833,81894624,81900253 Gene ID= ENSG00000141552.17 TPM= 1.29 Transcript Type= protein_coding chr17 81891746 81900254 81891746 81900254 + ENST00000571874.6@ANAPC11 ENST00000571874.6 protein_coding 81891746,81893552,81894467,81899920 81891863,81893614,81894586,81900254 Gene ID= ENSG00000141552.17 TPM= 4.39 Transcript Type= protein_coding chr17 81891760 81900254 81891760 81900254 + ENST00000577747.5@ANAPC11 ENST00000577747.5 protein_coding 81891760,81893104,81893552,81894467,81899920 81891829,81893187,81893614,81894586,81900254 Gene ID= ENSG00000141552.17 TPM= 1.68 Transcript Type= protein_coding chr17 81900965 81911464 81900965 81911464 - ENST00000538936.6@PCYT2 ENST00000538936.6 protein_coding 81911267,81909514,81908876,81908568,81907773,81907554,81906760,81906464,81906100,81905670,81905382,81905066,81900965 81911464,81909602,81909037,81908634,81907857,81907598,81906898,81906546,81906177,81905735,81905447,81905154,81904944 Gene ID= ENSG00000185813.10 TPM= 89.65 Transcript Type= protein_coding chr17 81911938 81918190 81911938 81918190 - transcript5540.chr17.nic@SIRT7 transcript5540.chr17.nic protein_coding 81918039,81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911938 81918190,81917967,81917719,81915681,81915512,81914702,81914504,81914167,81913880,81912614 Gene ID= ENSG00000187531.13 TPM= 1.81 Transcript Type= NA chr17 81911939 81918194 81911939 81918194 - ENST00000328666.10@SIRT7 ENST00000328666.10 protein_coding 81918039,81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911939 81918194,81917967,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614 Gene ID= ENSG00000187531.13 TPM= 19.32 Transcript Type= protein_coding chr17 81911938 81918165 81911938 81918165 - transcript5542.chr17.nic@SIRT7 transcript5542.chr17.nic protein_coding 81917830,81917615,81915611,81915440,81914604,81914294,81914087,81913774,81911938 81918165,81917719,81915681,81915512,81914702,81914530,81914167,81913880,81912614 Gene ID= ENSG00000187531.13 TPM= 5.73 Transcript Type= NA chr17 81911938 81918190 81911938 81918190 - transcript5544.chr17.nic@SIRT7 transcript5544.chr17.nic protein_coding 81918039,81917830,81915611,81915440,81914604,81914294,81914087,81913774,81911938 81918190,81917967,81917719,81915512,81914702,81914530,81914167,81913880,81912614 Gene ID= ENSG00000187531.13 TPM= 3.92 Transcript Type= NA chr17 81911938 81918190 81911938 81918190 - transcript5545.chr17.nic@SIRT7 transcript5545.chr17.nic protein_coding 81918039,81917830,81917615,81915611,81915440,81914604,81914087,81913774,81911938 81918190,81917967,81917719,81915681,81915512,81914702,81914530,81913880,81912614 Gene ID= ENSG00000187531.13 TPM= 2.72 Transcript Type= NA chr17 81918270 81927714 81918270 81927714 - ENST00000357736.8@MAFG ENST00000357736.8 protein_coding 81927528,81923150,81918270 81927714,81923214,81923057 Gene ID= ENSG00000197063.10 TPM= 37.13 Transcript Type= protein_coding chr17 81927829 81930753 81927829 81930753 + ENST00000582106.1@MAFG-AS1 ENST00000582106.1 antisense_RNA 81927829,81929476 81928445,81930753 Gene ID= ENSG00000265688.1 TPM= 4.53 Transcript Type= antisense_RNA chr17 81932384 81937328 81932384 81937328 - ENST00000619204.4@PYCR1 ENST00000619204.4 protein_coding 81937262,81936748,81936123,81935337,81934926,81934653,81934326,81932384 81937328,81936861,81936193,81935516,81935147,81934745,81934489,81933376 Gene ID= ENSG00000183010.16 TPM= 6.34 Transcript Type= protein_coding chr17 81932384 81937328 81932384 81937328 - ENST00000629768.2@PYCR1 ENST00000629768.2 protein_coding 81937262,81936748,81936123,81935337,81934926,81934653,81932384 81937328,81936861,81936193,81935516,81935147,81934745,81933376 Gene ID= ENSG00000183010.16 TPM= 1.81 Transcript Type= protein_coding chr17 81977630 82017402 81977630 82017402 + transcript5555.chr17.nnic@ASPSCR1 transcript5555.chr17.nnic protein_coding 81977630,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82009956,82010802,82011543,82012231,82016476,82016800,82016941,82017309 81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010052,82010868,82011605,82012283,82016527,82016869,82017113,82017402 Gene ID= ENSG00000169696.15 TPM= 1.81 Transcript Type= NA chr17 81977543 82017404 81977543 82017404 + transcript5559.chr17.nic@ASPSCR1 transcript5559.chr17.nic protein_coding 81977543,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012156,82016476,82016800,82016941,82017309 81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017404 Gene ID= ENSG00000169696.15 TPM= 2.72 Transcript Type= NA chr17 81977629 82017404 81977629 82017404 + transcript5560.chr17.nic@ASPSCR1 transcript5560.chr17.nic protein_coding 81977629,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309 81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017088,82017404 Gene ID= ENSG00000169696.15 TPM= 3.62 Transcript Type= NA chr17 81977632 82017404 81977632 82017404 + transcript5567.chr17.nic@ASPSCR1 transcript5567.chr17.nic protein_coding 81977632,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82017309 81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82017113,82017404 Gene ID= ENSG00000169696.15 TPM= 1.81 Transcript Type= NA chr17 81977629 82017403 81977629 82017403 + transcript5571.chr17.nic@ASPSCR1 transcript5571.chr17.nic protein_coding 81977629,81979184,81983554,81985507,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309 81977748,81979239,81983668,81985607,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017403 Gene ID= ENSG00000169696.15 TPM= 1.81 Transcript Type= NA chr17 81977550 82017406 81977550 82017406 + ENST00000306739.8@ASPSCR1 ENST00000306739.8 protein_coding 81977550,81979184,81983554,81985507,81994821,81995992,81996420,82009037,82009486,82010802,82011543,82012231,82016476,82016800,82016941,82017309 81977748,81979239,81983668,81985607,81994878,81996065,81996846,82009191,82009567,82010868,82011605,82012283,82016527,82016869,82017113,82017406 Gene ID= ENSG00000169696.15 TPM= 47.99 Transcript Type= protein_coding chr17 82018703 82022918 82018703 82022918 - ENST00000306704.10@CENPX ENST00000306704.10 protein_coding 82022826,82019858,82019293,82018703 82022918,82019909,82019381,82019219 Gene ID= ENSG00000169689.14 TPM= 20.37 Transcript Type= protein_coding chr17 82018704 82022908 82018704 82022908 - transcript5578.chr17.nic@CENPX transcript5578.chr17.nic protein_coding 82022826,82019858,82019641,82018704 82022908,82019909,82019694,82019381 Gene ID= ENSG00000169689.14 TPM= 2.26 Transcript Type= NA chr17 82018703 82022918 82018703 82022918 - ENST00000392359.7@CENPX ENST00000392359.7 protein_coding 82022826,82019858,82019641,82019293,82018703 82022918,82019909,82019694,82019381,82019219 Gene ID= ENSG00000169689.14 TPM= 14.04 Transcript Type= protein_coding chr17 82018703 82022892 82018703 82022892 - ENST00000580435.5@CENPX ENST00000580435.5 protein_coding 82022826,82019858,82019308,82018703 82022892,82019909,82019381,82019219 Gene ID= ENSG00000169689.14 TPM= 1.36 Transcript Type= protein_coding chr17 82023277 82031152 82023277 82031152 + transcript5583.chr17.nic@LRRC45 transcript5583.chr17.nic protein_coding 82023277,82024278,82024693,82025000,82025379,82026899,82027386,82027674,82028011,82028234,82028397,82028613,82029543,82030065,82030319,82030609 82023863,82024339,82024763,82025178,82025507,82027011,82027444,82027751,82028146,82028311,82028508,82029185,82029635,82030238,82030466,82031152 Gene ID= ENSG00000169683.7 TPM= 8.15 Transcript Type= NA chr17 82023277 82031152 82023277 82031152 + transcript5586.chr17.nic@LRRC45 transcript5586.chr17.nic protein_coding 82023277,82024278,82024693,82025000,82025379,82027386,82027674,82028011,82028234,82028397,82028613,82029543,82030065,82030319,82030609 82023863,82024339,82024763,82025178,82027011,82027444,82027751,82028146,82028311,82028508,82029185,82029635,82030238,82030466,82031152 Gene ID= ENSG00000169683.7 TPM= 2.72 Transcript Type= NA chr17 82023302 82031151 82023302 82031151 + ENST00000306688.7@LRRC45 ENST00000306688.7 protein_coding 82023302,82024278,82024693,82025000,82025379,82026899,82027386,82027674,82028011,82028234,82028397,82028613,82029093,82029543,82030065,82030319,82030609 82023863,82024339,82024763,82025178,82025507,82027011,82027444,82027751,82028146,82028311,82028508,82028683,82029185,82029635,82030238,82030466,82031151 Gene ID= ENSG00000169683.7 TPM= 50.71 Transcript Type= protein_coding chr17 82031624 82034202 82031624 82034202 + ENST00000306897.8@RAC3 ENST00000306897.8 protein_coding 82031624,82032387,82032711,82032947,82033440,82033699 82031796,82032458,82032828,82033009,82033599,82034202 Gene ID= ENSG00000169750.8 TPM= 2.72 Transcript Type= protein_coding chr17 82035858 82037732 82035858 82037732 - ENST00000306869.6@DCXR ENST00000306869.6 protein_coding 82037631,82037450,82036859,82036721,82036544,82036384,82036191,82035858 82037732,82037547,82037013,82036763,82036643,82036448,82036308,82036063 Gene ID= ENSG00000169738.7 TPM= 70.33 Transcript Type= protein_coding chr17 82035879 82037695 82035879 82037695 - transcript5598.chr17.nic@DCXR transcript5598.chr17.nic protein_coding 82036859,82036721,82036544,82036384,82036191,82035879 82037695,82036763,82036643,82036448,82036308,82036063 Gene ID= ENSG00000169738.7 TPM= 37.73 Transcript Type= NA chr17 82035879 82037698 82035879 82037698 - ENST00000580320.5@DCXR ENST00000580320.5 protein_coding 82037450,82036859,82036721,82036544,82036384,82036191,82035879 82037698,82037013,82036763,82036643,82036448,82036308,82036063 Gene ID= ENSG00000169738.7 TPM= 18.72 Transcript Type= retained_intron chr17 82047903 82051859 82047903 82051859 - transcript5638.chr17.nic@RFNG transcript5638.chr17.nic protein_coding 82051500,82050662,82050402,82049918,82049677,82049031,82047903 82051859,82051342,82050555,82050006,82049842,82049116,82048807 Gene ID= ENSG00000169733.11 TPM= 4.18 Transcript Type= NA chr17 82047903 82051851 82047903 82051851 - transcript5640.chr17.nic@RFNG transcript5640.chr17.nic protein_coding 82051500,82051294,82050662,82050402,82049677,82049031,82047903 82051851,82051342,82050764,82050555,82050006,82049116,82048807 Gene ID= ENSG00000169733.11 TPM= 3.97 Transcript Type= NA chr17 82047903 82051843 82047903 82051843 - transcript5646.chr17.nic@RFNG transcript5646.chr17.nic protein_coding 82051500,82050662,82049677,82049031,82047903 82051843,82051342,82050555,82049116,82048807 Gene ID= ENSG00000169733.11 TPM= 5.17 Transcript Type= NA chr17 82047903 82051854 82047903 82051854 - transcript5648.chr17.nic@RFNG transcript5648.chr17.nic protein_coding 82051500,82049677,82049031,82047903 82051854,82051342,82049116,82048807 Gene ID= ENSG00000169733.11 TPM= 7.89 Transcript Type= NA chr17 82047902 82051774 82047902 82051774 - ENST00000310496.8@RFNG ENST00000310496.8 protein_coding 82051500,82051294,82050662,82050402,82049918,82049677,82049031,82047902 82051774,82051342,82050764,82050555,82050006,82049842,82049116,82048807 Gene ID= ENSG00000169733.11 TPM= 48.56 Transcript Type= protein_coding chr17 82051875 82057470 82051875 82057470 + ENST00000320548.8@GPS1 ENST00000320548.8 protein_coding 82051875,82052375,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053 82051964,82052459,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470 Gene ID= ENSG00000169727.12 TPM= 10.59 Transcript Type= protein_coding chr17 82051898 82057471 82051898 82057471 + transcript5609.chr17.nic@GPS1 transcript5609.chr17.nic protein_coding 82051898,82052256,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053 82051964,82052459,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057471 Gene ID= ENSG00000169727.12 TPM= 6.96 Transcript Type= NA chr17 82051865 82057470 82051865 82057470 + ENST00000578552.5@GPS1 ENST00000578552.5 protein_coding 82051865,82053274,82053868,82054510,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053 82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470 Gene ID= ENSG00000169727.12 TPM= 122.87 Transcript Type= protein_coding chr17 82051897 82057470 82051897 82057470 + ENST00000623691.3@GPS1 ENST00000623691.3 protein_coding 82051897,82053274,82053868,82054510,82054898,82055165,82055740,82056001,82056286,82056470,82056629,82056840,82057053 82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470 Gene ID= ENSG00000169727.12 TPM= 24.16 Transcript Type= protein_coding chr17 82051929 82057463 82051929 82057463 + ENST00000584460.5@GPS1 ENST00000584460.5 protein_coding 82051929,82053234,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053 82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057463 Gene ID= ENSG00000169727.12 TPM= 2.07 Transcript Type= nonsense_mediated_decay chr17 82051909 82057470 82051909 82057470 + ENST00000306823.10@GPS1 ENST00000306823.10 protein_coding 82051909,82053274,82053868,82054498,82054898,82055162,82055740,82056001,82056286,82056470,82056629,82056840,82057053 82051964,82053366,82054049,82054810,82054975,82055222,82055825,82056095,82056391,82056550,82056766,82056974,82057470 Gene ID= ENSG00000169727.12 TPM= 8.06 Transcript Type= protein_coding chr17 82057869 82065874 82057869 82065874 - transcript5662.chr17.nic@DUS1L transcript5662.chr17.nic protein_coding 82065613,82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060865,82060701,82059948,82058341,82057869 82065874,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058818,82058254 Gene ID= ENSG00000169718.17 TPM= 38.58 Transcript Type= NA chr17 82057869 82065801 82057869 82065801 - transcript5669.chr17.nic@DUS1L transcript5669.chr17.nic protein_coding 82065613,82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060865,82060701,82058341,82057869 82065801,82065069,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058254 Gene ID= ENSG00000169718.17 TPM= 6.34 Transcript Type= NA chr17 82057872 82065545 82057872 82065545 - ENST00000354321.11@DUS1L ENST00000354321.11 protein_coding 82064823,82064126,82063468,82062861,82061901,82061618,82061209,82060865,82060701,82059948,82058781,82058341,82057872 82065545,82064234,82063518,82062973,82061983,82061721,82061353,82060961,82060783,82060093,82058818,82058416,82058254 Gene ID= ENSG00000169718.17 TPM= 6.88 Transcript Type= protein_coding chr17 82101457 82212881 82101457 82212881 - transcript5683.chr17.nic@CCDC57 transcript5683.chr17.nic protein_coding 82212785,82201538,82198314,82195263,82193982,82193756,82188219,82183774,82179027,82178474,82172638,82171701,82163200,82157748,82151560,82134073,82128493,82127692,82101457 82212881,82201952,82198422,82195364,82194139,82193830,82188419,82183932,82179189,82178605,82172860,82171853,82163357,82157948,82151773,82134194,82128597,82127908,82101866 Gene ID= ENSG00000176155.18 TPM= 3.62 Transcript Type= NA chr17 82101457 82212881 82101457 82212881 - transcript5687.chr17.nic@CCDC57 transcript5687.chr17.nic protein_coding 82212785,82201538,82198314,82195263,82193756,82188219,82183774,82179027,82178474,82172638,82171701,82163200,82157748,82151560,82134073,82128493,82127692,82101457 82212881,82201952,82198422,82195364,82194139,82188419,82183932,82179189,82178605,82172860,82171853,82163357,82157948,82151773,82134194,82128597,82127908,82101866 Gene ID= ENSG00000176155.18 TPM= 1.81 Transcript Type= NA chr17 82153627 82212828 82153627 82212828 - transcript5697.chr17.nic@CCDC57 transcript5697.chr17.nic protein_coding 82212785,82201538,82198314,82195263,82193756,82188219,82183774,82179027,82178474,82172638,82171701,82163200,82153627 82212828,82201952,82198422,82195364,82194139,82188419,82183932,82179189,82178605,82172860,82171853,82163357,82157948 Gene ID= ENSG00000176155.18 TPM= 1.81 Transcript Type= NA chr17 82101457 82155921 82101457 82155921 - transcript5700.chr17.nic@CCDC57 transcript5700.chr17.nic protein_coding 82151560,82134073,82128493,82127692,82101457 82155921,82134194,82128597,82127908,82101866 Gene ID= ENSG00000176155.18 TPM= 3.62 Transcript Type= NA chr17 82228406 82239498 82228406 82239498 + ENST00000392341.5@SLC16A3 ENST00000392341.5 protein_coding 82228406,82235983,82236729,82237138,82238702 82228545,82236231,82236872,82237893,82239498 Gene ID= ENSG00000141526.16 TPM= 5.66 Transcript Type= protein_coding chr17 82229042 82239481 82229042 82239481 + transcript5706.chr17.nic@SLC16A3 transcript5706.chr17.nic protein_coding 82229042,82235983,82236729,82237138 82229106,82236231,82236872,82239481 Gene ID= ENSG00000141526.16 TPM= 3.85 Transcript Type= NA chr17 82229042 82239495 82229042 82239495 + transcript5707.chr17.nic@SLC16A3 transcript5707.chr17.nic protein_coding 82229042,82235983,82237138,82238702 82229106,82236872,82237893,82239495 Gene ID= ENSG00000141526.16 TPM= 2.04 Transcript Type= NA chr17 82229032 82239479 82229032 82239479 + ENST00000582743.5@SLC16A3 ENST00000582743.5 protein_coding 82229032,82235983,82236729,82237138,82238702 82229106,82236231,82236872,82237893,82239479 Gene ID= ENSG00000141526.16 TPM= 28.3 Transcript Type= protein_coding chr17 82242654 82273718 82242654 82273718 - transcript5708.chr17.nic@CSNK1D transcript5708.chr17.nic protein_coding 82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82246198,82245976,82242654 82273718,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82246433,82246039,82244831 Gene ID= ENSG00000141551.14 TPM= 3.24 Transcript Type= NA chr17 82242654 82273718 82242654 82273718 - transcript5717.chr17.nic@CSNK1D transcript5717.chr17.nic protein_coding 82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82242654 82273718,82265796,82255577,82253244,82252604,82251527,82250179,82249014,82246039,82244831 Gene ID= ENSG00000141551.14 TPM= 5.05 Transcript Type= NA chr17 82242667 82273731 82242667 82273731 - ENST00000314028.10@CSNK1D ENST00000314028.10 protein_coding 82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82242667 82273731,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82244831 Gene ID= ENSG00000141551.14 TPM= 30.41 Transcript Type= protein_coding chr17 82244362 82273697 82244362 82273697 - ENST00000392334.6@CSNK1D ENST00000392334.6 protein_coding 82273306,82265686,82255429,82253016,82252434,82251379,82249431,82248875,82245976,82244362 82273697,82265796,82255577,82253244,82252604,82251527,82249602,82249014,82246039,82244831 Gene ID= ENSG00000141551.14 TPM= 20.15 Transcript Type= protein_coding chr17 82314870 82317602 82314870 82317602 - ENST00000312648.7@CD7 ENST00000312648.7 protein_coding 82317414,82316667,82316195,82314870 82317602,82316981,82316409,82315431 Gene ID= ENSG00000173762.7 TPM= 1.81 Transcript Type= protein_coding chr17 82321024 82333998 82321024 82333998 - ENST00000269389.7@SECTM1 ENST00000269389.7 protein_coding 82333700,82327147,82324582,82322878,82321024 82333998,82327292,82324890,82323011,82322370 Gene ID= ENSG00000141574.7 TPM= 19.92 Transcript Type= protein_coding chr17 82389211 82418567 82389211 82418567 - transcript5769.chr17.nnic@OGFOD3 transcript5769.chr17.nnic protein_coding 82418412,82415398,82411455,82409368,82407682,82406418,82405324,82403937,82398196,82394331,82389211 82418567,82415627,82411530,82409410,82407771,82406482,82405380,82404090,82398319,82394543,82392534 Gene ID= ENSG00000181396.12 TPM= 3.32 Transcript Type= NA chr17 82389223 82418637 82389223 82418637 - ENST00000313056.9@OGFOD3 ENST00000313056.9 protein_coding 82418412,82415398,82411455,82409368,82406418,82405324,82403937,82398196,82389223 82418637,82415627,82411530,82409410,82406482,82405380,82404090,82398319,82392534 Gene ID= ENSG00000181396.12 TPM= 45.88 Transcript Type= protein_coding chr17 82418340 82442651 82418340 82442651 + transcript5737.chr17.nic@HEXDC transcript5737.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440473,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82440334,82440613,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 5.99 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5749.chr17.nic@HEXDC transcript5749.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 24.39 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5750.chr17.nic@HEXDC transcript5750.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82440334,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 9.06 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5751.chr17.nic@HEXDC transcript5751.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82440613,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 6.8 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5752.chr17.nic@HEXDC transcript5752.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440473,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440334,82440613,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 9.16 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5760.chr17.nic@HEXDC transcript5760.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440334,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 9.51 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5761.chr17.nic@HEXDC transcript5761.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82440997,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82437363,82440613,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 11.78 Transcript Type= NA chr17 82418340 82442651 82418340 82442651 + transcript5773.chr17.nic@HEXDC transcript5773.chr17.nic protein_coding 82418340,82419749,82424394,82428558,82433658,82435689,82436667,82439631,82441165,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82437363,82441075,82441266,82441889,82442651 Gene ID= ENSG00000169660.15 TPM= 5.43 Transcript Type= NA chr17 82418697 82442641 82418697 82442641 + ENST00000577944.5@HEXDC ENST00000577944.5 protein_coding 82418697,82419749,82424394,82428558,82433658,82435689,82436667,82437168,82439631,82440997,82441153,82441800,82442177 82418740,82419883,82424503,82428645,82433822,82435872,82436738,82437363,82439713,82441070,82441266,82441889,82442641 Gene ID= ENSG00000169660.15 TPM= 3.26 Transcript Type= protein_coding chr17 82442644 82450823 82442644 82450823 - transcript5795.chr17.nic@C17orf62 transcript5795.chr17.nic protein_coding 82450700,82449431,82449170,82447580,82446623,82445864,82444447,82442644 82450823,82450254,82449292,82447621,82446696,82445960,82444591,82444124 Gene ID= ENSG00000178927.17 TPM= 22.82 Transcript Type= NA chr17 82442643 82450829 82442643 82450829 - ENST00000306645.9@C17orf62 ENST00000306645.9 protein_coding 82450700,82449170,82447580,82446623,82445864,82444447,82442643 82450829,82449292,82447621,82446696,82445960,82444591,82444124 Gene ID= ENSG00000178927.17 TPM= 151.41 Transcript Type= protein_coding chr17 82442644 82450709 82442644 82450709 - ENST00000437807.6@C17orf62 ENST00000437807.6 protein_coding 82450480,82449431,82449170,82447580,82446623,82445864,82444447,82442644 82450709,82449480,82449292,82447621,82446696,82445960,82444591,82444124 Gene ID= ENSG00000178927.17 TPM= 9.24 Transcript Type= protein_coding chr17 82453178 82458514 82453178 82458514 - transcript5848.chr17.nic@AC132938.3 transcript5848.chr17.nic antisense_RNA 82457673,82457438,82453178 82458514,82457548,82454413 Gene ID= ENSG00000265458.1 TPM= 2.72 Transcript Type= NA chr17 82458717 82488262 82458717 82488262 + transcript5827.chr17.nnic@NARF transcript5827.chr17.nnic protein_coding 82458717,82459992,82464287,82468764,82472564,82478800,82481082,82483167,82483716,82484813,82485497,82487916 82458830,82460072,82464430,82468896,82472698,82478918,82481211,82483304,82483779,82484950,82485654,82488262 Gene ID= ENSG00000141562.17 TPM= 2.72 Transcript Type= NA chr17 82458184 82488264 82458184 82488264 + transcript5831.chr17.nic@NARF transcript5831.chr17.nic protein_coding 82458184,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82484813,82485497,82487916 82458517,82460072,82464430,82468896,82472698,82478918,82481211,82483779,82484950,82485654,82488264 Gene ID= ENSG00000141562.17 TPM= 3.62 Transcript Type= NA chr17 82458718 82488273 82458718 82488273 + transcript5835.chr17.nic@NARF transcript5835.chr17.nic protein_coding 82458718,82459992,82464287,82468764,82472564,82478800,82480407,82481082,82483716,82485497,82487916 82458830,82460072,82464430,82468896,82472698,82478918,82480544,82481211,82484950,82485654,82488273 Gene ID= ENSG00000141562.17 TPM= 3.62 Transcript Type= NA chr17 82458185 82488255 82458185 82488255 + ENST00000390006.8@NARF ENST00000390006.8 protein_coding 82458185,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82484813,82485497,82487916 82458508,82460072,82464430,82468896,82472698,82478918,82481211,82483779,82484950,82485654,82488255 Gene ID= ENSG00000141562.17 TPM= 9.96 Transcript Type= protein_coding chr17 82458712 82488259 82458712 82488259 + ENST00000577812.5@NARF ENST00000577812.5 protein_coding 82458712,82459992,82464287,82468764,82472564,82478800,82481082,82483716,82485497,82487916 82458830,82460072,82464430,82468896,82472698,82478918,82481211,82484950,82485654,82488259 Gene ID= ENSG00000141562.17 TPM= 9.06 Transcript Type= retained_intron chr17 82519715 82604607 82519715 82604607 + ENST00000335255.9@FOXK2 ENST00000335255.9 protein_coding 82519715,82563354,82568054,82571724,82582741,82584013,82585904,82587063,82601303 82520307,82563548,82568201,82571870,82582934,82584188,82586200,82587272,82604607 Gene ID= ENSG00000141568.20 TPM= 55.24 Transcript Type= protein_coding chr17 82614562 82648535 82614562 82648535 - ENST00000392325.8@WDR45B ENST00000392325.8 protein_coding 82648274,82643949,82630921,82627204,82625389,82621609,82619043,82617296,82616524,82614562 82648535,82644023,82631022,82627291,82625483,82621799,82619128,82617397,82616645,82616025 Gene ID= ENSG00000141580.15 TPM= 155.07 Transcript Type= protein_coding chr17 82716683 82728017 82716683 82728017 + ENST00000269373.10@FN3KRP ENST00000269373.10 protein_coding 82716683,82718906,82720272,82722804,82726480,82726833 82716896,82719057,82720363,82722886,82726602,82728017 Gene ID= ENSG00000141560.14 TPM= 106.85 Transcript Type= protein_coding chr17 82735559 82749663 82735559 82749663 + transcript5871.chr17.nnic@FN3K transcript5871.chr17.nnic protein_coding 82735559,82738489,82740763,82741311,82748855,82749551 82735777,82738640,82740854,82741393,82748977,82749663 Gene ID= ENSG00000167363.13 TPM= 1.81 Transcript Type= NA chr17 82735273 82749699 82735273 82749699 + transcript5873.chr17.nic@FN3K transcript5873.chr17.nic protein_coding 82735273,82738489,82740763,82741311,82748855 82735777,82738640,82740854,82741393,82749699 Gene ID= ENSG00000167363.13 TPM= 3.62 Transcript Type= NA chr17 82752064 82945922 82752064 82945922 + ENST00000355528.8@TBCD ENST00000355528.8 protein_coding 82752064,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449 82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82945922 Gene ID= ENSG00000141556.20 TPM= 94.13 Transcript Type= protein_coding chr17 82752064 82942702 82752064 82942702 + transcript5882.chr17.nic@TBCD transcript5882.chr17.nic protein_coding 82752064,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82932658,82937271,82938049,82939367,82941399,82942449 82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82930643,82932735,82937360,82938136,82939476,82941483,82942702 Gene ID= ENSG00000141556.20 TPM= 6.34 Transcript Type= NA chr17 82752072 82943184 82752072 82943184 + transcript5884.chr17.nic@TBCD transcript5884.chr17.nic protein_coding 82752072,82756165,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449 82752377,82756215,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82943184 Gene ID= ENSG00000141556.20 TPM= 5.16 Transcript Type= NA chr17 82752049 82942700 82752049 82942700 + transcript5886.chr17.nnic@TBCD transcript5886.chr17.nnic protein_coding 82752049,82763965,82766267,82768420,82772452,82781589,82797757,82800864,82805875,82807608,82809708,82814840,82870224,82884145,82889668,82893547,82900651,82903405,82905936,82907761,82909285,82911758,82920556,82921501,82923652,82924939,82926400,82927186,82927905,82929113,82929362,82930522,82932658,82937271,82938049,82939367,82941399,82942449 82752377,82764062,82766368,82768566,82772507,82781721,82797802,82800996,82806011,82807668,82809782,82814934,82870380,82884202,82889697,82893632,82900731,82903478,82906053,82907821,82909307,82911789,82920618,82921577,82923733,82925057,82926491,82927323,82927988,82929271,82929500,82930643,82932735,82937360,82938136,82939476,82941483,82942700 Gene ID= ENSG00000141556.20 TPM= 15.35 Transcript Type= NA chr17 82929425 82942704 82929425 82942704 + ENST00000576677.5@TBCD ENST00000576677.5 protein_coding 82929425,82932658,82937271,82938049,82939367,82941399,82942449 82930643,82932735,82937360,82938136,82939476,82941483,82942704 Gene ID= ENSG00000141556.20 TPM= 1.81 Transcript Type= retained_intron chr17 82943791 83051810 82943791 83051810 - ENST00000320865.3@B3GNTL1 ENST00000320865.3 protein_coding 83051737,83048669,83048471,83035035,83014454,83005115,82965651,82961057,82957359,82957181,82956695,82946879,82943791 83051810,83048785,83048570,83035099,83014519,83005210,82965746,82961181,82957494,82957249,82956769,82946983,82944049 Gene ID= ENSG00000175711.8 TPM= 5.43 Transcript Type= protein_coding chr17 83011429 83051813 83011429 83051813 - transcript5914.chr17.nnic@B3GNTL1 transcript5914.chr17.nnic protein_coding 83051737,83048669,83048471,83035035,83014454,83012124,83011429 83051813,83048785,83048570,83035099,83014519,83012606,83011979 Gene ID= ENSG00000175711.8 TPM= 1.81 Transcript Type= NA chr17 83079691 83095119 83079691 83095119 + ENST00000320095.11@METRNL ENST00000320095.11 protein_coding 83079691,83084938,83093167,83094256 83079985,83085323,83093226,83095119 Gene ID= ENSG00000176845.12 TPM= 5.43 Transcript Type= protein_coding chr18 158828 212050 158828 212050 + transcript10.chr18.nnic@USP14 transcript10.chr18.nnic protein_coding 158828,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,210386,211133 159021,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210031,210493,212050 Gene ID= ENSG00000101557.14 TPM= 1.81 Transcript Type= NA chr18 158483 212045 158483 212045 + transcript11.chr18.nic@USP14 transcript11.chr18.nic protein_coding 158483,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,211133 158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210493,212045 Gene ID= ENSG00000101557.14 TPM= 2.72 Transcript Type= NA chr18 158333 212008 158333 212008 + transcript12.chr18.nnic@USP14 transcript12.chr18.nnic protein_coding 158333,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,209971,210386,211133 158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,210031,210493,212008 Gene ID= ENSG00000101557.14 TPM= 1.81 Transcript Type= NA chr18 158608 214629 158608 214629 + ENST00000261601.7@USP14 ENST00000261601.7 protein_coding 158608,163308,166787,178933,180236,192842,196637,197616,198047,199202,202880,203098,204564,209971,210386,211133 158714,163453,166819,179037,180339,192900,196767,197696,198132,199316,202945,203190,204692,210031,210493,214629 Gene ID= ENSG00000101557.14 TPM= 33.51 Transcript Type= protein_coding chr18 214522 268064 214522 268064 - transcript4.chr18.nic@THOC1 transcript4.chr18.nic protein_coding 267966,265457,265303,264026,260718,260186,259682,259180,254273,252539,247849,246324,226801,225337,225089,224924,224084,223440,218886,216486,215429,214522 268064,265530,265363,264092,260759,260304,259730,259275,254355,252612,247957,246455,226901,225403,225139,224994,224179,223505,218969,216633,215504,214921 Gene ID= ENSG00000079134.11 TPM= 1.81 Transcript Type= NA chr18 214522 268064 214522 268064 - transcript7.chr18.nic@THOC1 transcript7.chr18.nic protein_coding 267966,265457,265303,264026,260186,259682,259180,254273,252539,247849,246324,226801,225337,225089,224924,224084,223440,218886,216486,215429,214522 268064,265530,265363,264092,260304,259730,259275,254355,252612,247957,246455,226901,225403,225139,224994,224200,223505,218969,216633,215504,214921 Gene ID= ENSG00000079134.11 TPM= 1.81 Transcript Type= NA chr18 214521 268027 214521 268027 - ENST00000261600.10@THOC1 ENST00000261600.10 protein_coding 267966,265457,265303,264026,260186,259682,259180,254273,252539,247849,246324,226801,225337,225089,224924,224084,223440,218886,216486,215429,214521 268027,265530,265363,264092,260304,259730,259275,254355,252612,247957,246455,226901,225403,225139,224994,224179,223505,218969,216633,215504,214921 Gene ID= ENSG00000079134.11 TPM= 11.77 Transcript Type= protein_coding chr18 214520 268019 214520 268019 - ENST00000579232.5@THOC1 ENST00000579232.5 protein_coding 267966,265457,265303,264026,260186,259682,259180,254273,252539,247849,246324,226801,225089,224924,224084,223440,218886,216486,215429,214520 268019,265530,265363,264092,260304,259730,259275,254355,252612,247957,246455,226901,225403,224994,224179,223505,218969,216633,215504,214921 Gene ID= ENSG00000079134.11 TPM= 3.62 Transcript Type= retained_intron chr18 657604 673578 657604 673578 + ENST00000323274.14@TYMS ENST00000323274.14 protein_coding 657604,659641,662146,669072,670692,671380,672860 657947,659714,662320,669173,670867,671451,673578 Gene ID= ENSG00000176890.15 TPM= 6.34 Transcript Type= protein_coding chr18 672546 712683 672546 712683 - transcript21.chr18.nic@ENOSF1 transcript21.chr18.nic protein_coding 712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,674161,672546 712683,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,678737,677872,677444,675402,674406,673076 Gene ID= ENSG00000132199.18 TPM= 3.62 Transcript Type= NA chr18 672546 712630 672546 712630 - transcript25.chr18.nnic@ENOSF1 transcript25.chr18.nnic protein_coding 712504,706470,697240,694248,693882,691204,690549,688574,685921,683246,678696,677743,677345,675321,674161,672546 712630,706578,697355,694334,693908,691276,690631,688608,686008,683380,678737,677872,677444,675402,674406,673076 Gene ID= ENSG00000132199.18 TPM= 1.81 Transcript Type= NA chr18 673918 712683 673918 712683 - transcript29.chr18.nic@ENOSF1 transcript29.chr18.nic protein_coding 712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,673918 712683,706578,697355,694334,693908,691276,691106,690631,688608,686008,683395,678737,677872,677444,675402,674406 Gene ID= ENSG00000132199.18 TPM= 2.72 Transcript Type= NA chr18 674013 712683 674013 712683 - transcript33.chr18.nnic@ENOSF1 transcript33.chr18.nnic protein_coding 712504,706470,697240,694248,693882,691204,690549,688574,685921,683246,678696,677743,677345,675321,674013 712683,706578,697355,694334,693908,691276,690631,688608,686008,683380,678737,677872,677444,675402,674406 Gene ID= ENSG00000132199.18 TPM= 2.26 Transcript Type= NA chr18 673918 712683 673918 712683 - transcript34.chr18.nic@ENOSF1 transcript34.chr18.nic protein_coding 712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,677743,677345,675321,673918 712683,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,677872,677444,675402,674406 Gene ID= ENSG00000132199.18 TPM= 1.81 Transcript Type= NA chr18 673859 712676 673859 712676 - ENST00000251101.11@ENOSF1 ENST00000251101.11 protein_coding 712504,706470,697240,694248,693882,691204,691068,690549,688574,685921,683246,678696,677743,677345,675321,673859 712676,706578,697355,694334,693908,691276,691106,690631,688608,686008,683380,678737,677872,677444,675402,674406 Gene ID= ENSG00000132199.18 TPM= 52.97 Transcript Type= protein_coding chr18 721588 812546 721588 812546 - ENST00000584307.5@YES1 ENST00000584307.5 protein_coding 812384,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721588 812546,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632 Gene ID= ENSG00000176105.13 TPM= 5.43 Transcript Type= protein_coding chr18 721748 812238 721748 812238 - ENST00000314574.4@YES1 ENST00000314574.4 protein_coding 812114,756557,751705,747920,745948,745708,743260,742918,739735,736808,732834,721748 812238,756835,751804,748018,746051,745857,743415,743097,739811,736961,732965,724632 Gene ID= ENSG00000176105.13 TPM= 7.24 Transcript Type= protein_coding chr18 2537525 2571509 2537525 2571509 - ENST00000319888.10@METTL4 ENST00000319888.10 protein_coding 2571149,2566821,2563797,2554669,2552695,2547355,2544653,2537525 2571509,2567654,2563859,2555038,2552764,2547529,2544759,2539145 Gene ID= ENSG00000101574.14 TPM= 1.81 Transcript Type= protein_coding chr18 2571511 2616635 2571511 2616635 + ENST00000261597.8@NDC80 ENST00000261597.8 protein_coding 2571511,2572977,2574989,2577746,2577969,2578927,2585113,2587830,2589204,2590018,2595416,2599019,2601396,2606415,2608700,2610759,2616437 2571683,2573086,2575066,2577869,2578141,2579029,2585202,2587923,2589310,2590162,2595621,2599171,2601485,2606507,2608830,2610861,2616635 Gene ID= ENSG00000080986.12 TPM= 1.81 Transcript Type= protein_coding chr18 2655738 2805017 2655738 2805017 + ENST00000320876.10@SMCHD1 ENST00000320876.10 protein_coding 2655738,2666157,2666870,2673281,2674015,2688394,2688628,2694527,2697032,2697831,2700539,2700735,2703692,2705694,2706364,2707563,2707807,2718158,2718315,2722519,2724899,2726452,2728457,2729275,2732265,2738397,2739432,2740703,2743761,2747522,2750043,2750350,2751278,2752488,2760652,2762105,2763637,2769694,2769989,2771533,2772250,2775734,2777806,2778169,2784450,2795949,2796407,2802528 2656261,2666232,2667031,2673363,2674145,2688508,2688747,2694693,2697122,2698041,2700659,2700918,2703886,2705807,2706470,2707645,2707920,2718235,2718434,2722663,2724995,2726524,2728596,2729409,2732492,2738545,2739520,2740821,2743928,2747647,2750122,2750507,2751393,2752552,2760739,2762236,2763789,2769820,2770108,2771618,2772372,2775924,2777915,2778239,2784621,2796107,2796521,2805017 Gene ID= ENSG00000101596.14 TPM= 2.72 Transcript Type= protein_coding chr18 2917002 3013329 2917002 3013329 - transcript61.chr18.nic@LPIN2 transcript61.chr18.nic protein_coding 3013087,2960649,2954504,2951055,2940605,2939480,2937692,2934351,2931256,2929065,2928591,2927722,2926723,2925224,2924398,2923775,2922047,2921533,2920778,2917002 3013329,2960849,2954599,2951356,2940712,2939603,2938037,2934450,2931443,2929158,2928660,2927811,2926805,2925368,2924546,2923861,2922199,2921647,2920881,2920437 Gene ID= ENSG00000101577.9 TPM= 17.21 Transcript Type= NA chr18 3247530 3256236 3247530 3256236 + ENST00000217652.7@MYL12A ENST00000217652.7 protein_coding 3247530,3253233,3253889,3255746 3247909,3253428,3254050,3256236 Gene ID= ENSG00000101608.12 TPM= 290.68 Transcript Type= protein_coding chr18 3247481 3256227 3247481 3256227 + ENST00000579226.5@MYL12A ENST00000579226.5 protein_coding 3247481,3253233,3253889,3255746 3247587,3253428,3254050,3256227 Gene ID= ENSG00000101608.12 TPM= 12.68 Transcript Type= protein_coding chr18 3447609 3459978 3447609 3459978 + ENST00000618001.4@TGIF1 ENST00000618001.4 protein_coding 3447609,3456354,3457365 3447797,3456580,3459978 Gene ID= ENSG00000177426.20 TPM= 2.72 Transcript Type= protein_coding chr18 3449651 3458406 3449651 3458406 + ENST00000405385.7@TGIF1 ENST00000405385.7 protein_coding 3449651,3456354,3457365 3450070,3456580,3458406 Gene ID= ENSG00000177426.20 TPM= 6.34 Transcript Type= protein_coding chr18 3501988 3874320 3501988 3874320 - transcript90.chr18.nic@DLGAP1 transcript90.chr18.nic protein_coding 3874154,3814059,3742335,3729135,3581875,3567490,3534194,3508570,3501988 3874320,3814273,3742512,3729375,3582248,3567581,3534615,3508661,3502645 Gene ID= ENSG00000170579.16 TPM= 6.34 Transcript Type= NA chr18 3496034 3509410 3496034 3509410 - transcript93.chr18.nnic@DLGAP1 transcript93.chr18.nnic protein_coding 3509154,3508570,3502493,3496034 3509410,3508661,3502645,3499394 Gene ID= ENSG00000170579.16 TPM= 2.72 Transcript Type= NA chr18 3594077 3597384 3594077 3597384 + transcript94.chr18.nic@DLGAP1-AS1 transcript94.chr18.nic antisense_RNA 3594077,3594420,3596579,3597176 3594240,3594484,3596675,3597384 Gene ID= ENSG00000177337.7 TPM= 9.96 Transcript Type= NA chr18 3594112 3597372 3594112 3597372 + ENST00000576606.5@DLGAP1-AS1 ENST00000576606.5 antisense_RNA 3594112,3594420,3597176 3594240,3594484,3597372 Gene ID= ENSG00000177337.7 TPM= 8.15 Transcript Type= antisense_RNA chr18 5238069 5246513 5238069 5246513 + transcript103.chr18.nnic@LINC00667 transcript103.chr18.nnic lincRNA 5238069,5240648,5241699,5243594 5239049,5240709,5241889,5246513 Gene ID= ENSG00000263753.6 TPM= 2.11 Transcript Type= NA chr18 5238081 5246511 5238081 5246511 + transcript108.chr18.nnic@LINC00667 transcript108.chr18.nnic lincRNA 5238081,5241699,5243594 5238893,5241812,5246511 Gene ID= ENSG00000263753.6 TPM= 3.02 Transcript Type= NA chr18 5238096 5246511 5238096 5246511 + transcript112.chr18.nnic@LINC00667 transcript112.chr18.nnic lincRNA 5238096,5241699,5243594 5239196,5241812,5246511 Gene ID= ENSG00000263753.6 TPM= 2.11 Transcript Type= NA chr18 5289380 5295684 5289380 5295684 - transcript117.chr18.nnic@ZBTB14 transcript117.chr18.nnic protein_coding 5294801,5293244,5289380 5295684,5293327,5292204 Gene ID= ENSG00000198081.10 TPM= 4.53 Transcript Type= NA chr18 5289019 5296040 5289019 5296040 - ENST00000357006.8@ZBTB14 ENST00000357006.8 protein_coding 5295813,5293972,5293244,5289019 5296040,5294001,5293327,5292204 Gene ID= ENSG00000198081.10 TPM= 4.53 Transcript Type= protein_coding chr18 5392380 5544330 5392380 5544330 - transcript131.chr18.nic@EPB41L3 transcript131.chr18.nic protein_coding 5543913,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5395067,5392380 5544330,5489194,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419877,5410619,5406968,5397426,5396332,5395707,5395147,5393478 Gene ID= ENSG00000082397.17 TPM= 5.14 Transcript Type= NA chr18 5392382 5544170 5392382 5544170 - transcript144.chr18.nnic@EPB41L3 transcript144.chr18.nnic protein_coding 5543913,5489001,5478241,5445140,5443838,5438035,5433903,5433469,5428313,5424262,5423378,5419711,5410566,5406777,5397058,5396201,5395609,5394677,5392382 5544170,5489194,5478438,5445244,5443880,5438110,5434121,5433556,5428465,5424359,5423553,5419931,5410619,5406968,5397426,5396332,5395707,5394793,5393478 Gene ID= ENSG00000082397.17 TPM= 10.03 Transcript Type= NA chr18 5954707 6414964 5954707 6414964 - transcript157.chr18.nnic@L3MBTL4 transcript157.chr18.nnic protein_coding 6414801,6311998,6311554,6301903,6244484,6243294,6241358,6239718,6237964,6215750,6213149,6171828,6138194,6093355,6080881,5969393,5960094,5954707 6414964,6312056,6311656,6301957,6244588,6243429,6241449,6239872,6238040,6215835,6213259,6171942,6138296,6093528,6080951,5969562,5960156,5956387 Gene ID= ENSG00000154655.15 TPM= 2.11 Transcript Type= NA chr18 5954707 6414902 5954707 6414902 - transcript158.chr18.nnic@L3MBTL4 transcript158.chr18.nnic protein_coding 6414801,6311998,6311554,6301903,6263947,6244484,6243294,6241358,6239718,6215750,6213149,6171828,6138194,6093355,6080881,5969393,5960094,5954707 6414902,6312056,6311656,6301957,6264038,6244588,6243429,6241449,6239872,6215835,6213259,6171942,6138296,6093528,6080951,5969562,5960156,5956387 Gene ID= ENSG00000154655.15 TPM= 2.11 Transcript Type= NA chr18 6079806 6415243 6079806 6415243 - transcript160.chr18.nnic@L3MBTL4 transcript160.chr18.nnic protein_coding 6415001,6311998,6311554,6301903,6263947,6244484,6243294,6241358,6239718,6237964,6215750,6213149,6171828,6138194,6093355,6080881,6079806 6415243,6312056,6311656,6301957,6264038,6244588,6243429,6241449,6239872,6238040,6215835,6213259,6171942,6138296,6093528,6080951,6080787 Gene ID= ENSG00000154655.15 TPM= 1.81 Transcript Type= NA chr18 5954706 6414911 5954706 6414911 - ENST00000317931.11@L3MBTL4 ENST00000317931.11 protein_coding 6414801,6311998,6311554,6301903,6263947,6244484,6243294,6241358,6239718,6237964,6215750,6213149,6171828,6138194,6093355,6080881,5969393,5960094,5954706 6414911,6312056,6311656,6301957,6264038,6244588,6243429,6241449,6239872,6238040,6215835,6213259,6171942,6138296,6093528,6080951,5969562,5960156,5956387 Gene ID= ENSG00000154655.15 TPM= 4.83 Transcript Type= protein_coding chr18 6729669 6898721 6729669 6898721 + transcript172.chr18.nic@ARHGAP28 transcript172.chr18.nic protein_coding 6729669,6824762,6837197,6851034,6859808,6868150,6870590,6873409,6873684,6876131,6882137,6887157,6889888,6890430,6894835,6896502,6898436 6729943,6824964,6837414,6851126,6859897,6868234,6870732,6873574,6873775,6876208,6882299,6887239,6890085,6890543,6894891,6896626,6898721 Gene ID= ENSG00000088756.12 TPM= 1.81 Transcript Type= NA chr18 7774147 8406860 7774147 8406860 + transcript181.chr18.nic@PTPRM transcript181.chr18.nic protein_coding 7774147,7888106,7906505,7926568,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109 7774271,7888377,7906583,7926683,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406860 Gene ID= ENSG00000173482.16 TPM= 19.02 Transcript Type= NA chr18 7946848 8406954 7946848 8406954 + transcript184.chr18.nic@PTPRM transcript184.chr18.nic protein_coding 7946848,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8378265,8379167,8380296,8384561,8387072,8394476,8406109 7946977,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8376597,8378414,8379340,8380427,8384686,8387235,8394611,8406954 Gene ID= ENSG00000173482.16 TPM= 28.98 Transcript Type= NA chr18 7946848 8406854 7946848 8406854 + transcript185.chr18.nic@PTPRM transcript185.chr18.nic protein_coding 7946848,7949181,7955121,8069686,8076455,8085671,8088749,8113486,8114791,8143647,8244058,8247845,8253227,8296368,8314781,8319178,8343423,8370890,8376046,8376462,8379167,8380296,8384561,8387072,8394476,8406109 7946977,7949355,7955414,8069994,8076564,8085872,8088851,8113759,8114827,8143779,8244209,8247919,8253414,8296455,8314857,8319214,8343520,8371006,8376200,8378414,8379340,8380427,8384686,8387235,8394611,8406854 Gene ID= ENSG00000173482.16 TPM= 1.81 Transcript Type= NA chr18 8620161 8638241 8620161 8638241 + transcript186.chr18.nnic@RAB12 transcript186.chr18.nnic protein_coding 8620161,8633189,8635531,8636253,8638149 8624998,8633327,8635622,8636357,8638241 Gene ID= ENSG00000206418.3 TPM= 1.81 Transcript Type= NA chr18 9102663 9134342 9102663 9134342 + transcript189.chr18.nic@NDUFV2 transcript189.chr18.nic protein_coding 9102663,9117838,9119326,9119474,9122513,9124874,9126831,9134186 9102797,9117903,9119388,9119590,9122681,9124996,9126907,9134342 Gene ID= ENSG00000178127.12 TPM= 9.96 Transcript Type= NA chr18 9102630 9134345 9102630 9134345 + ENST00000318388.10@NDUFV2 ENST00000318388.10 protein_coding 9102630,9117838,9119326,9119474,9122513,9124874,9126831,9134186 9102797,9117903,9119388,9119590,9122681,9124983,9126907,9134345 Gene ID= ENSG00000178127.12 TPM= 277.1 Transcript Type= protein_coding chr18 9136778 9256306 9136778 9256306 + transcript194.chr18.nic@ANKRD12 transcript194.chr18.nic protein_coding 9136778,9182382,9195551,9208657,9211584,9216758,9221852,9254211 9136965,9182519,9195698,9208803,9211784,9216900,9221999,9256306 Gene ID= ENSG00000101745.16 TPM= 3.62 Transcript Type= NA chr18 9334767 9402420 9334767 9402420 + ENST00000262120.9@TWSG1 ENST00000262120.9 protein_coding 9334767,9337193,9359972,9396280,9399346 9334920,9337352,9360071,9396546,9402420 Gene ID= ENSG00000128791.11 TPM= 40.75 Transcript Type= protein_coding chr18 9475009 9538114 9475009 9538114 + ENST00000019317.8@RALBP1 ENST00000019317.8 protein_coding 9475009,9512991,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671 9475176,9513289,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9538114 Gene ID= ENSG00000017797.12 TPM= 3.47 Transcript Type= protein_coding chr18 9475501 9538111 9475501 9538111 + transcript203.chr18.nnic@RALBP1 transcript203.chr18.nnic protein_coding 9475501,9513075,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671 9475691,9513289,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9538111 Gene ID= ENSG00000017797.12 TPM= 3.17 Transcript Type= NA chr18 9475911 9538111 9475911 9538111 + transcript204.chr18.nic@RALBP1 transcript204.chr18.nic protein_coding 9475911,9512991,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671 9476286,9513289,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9538111 Gene ID= ENSG00000017797.12 TPM= 3.47 Transcript Type= NA chr18 9475429 9538111 9475429 9538111 + transcript205.chr18.nnic@RALBP1 transcript205.chr18.nnic protein_coding 9475429,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671 9475691,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9538111 Gene ID= ENSG00000017797.12 TPM= 4.53 Transcript Type= NA chr18 9475670 9538116 9475670 9538116 + ENST00000383432.7@RALBP1 ENST00000383432.7 protein_coding 9475670,9512991,9516845,9522160,9524594,9525720,9530834,9533335,9533703,9535671 9475691,9513289,9517303,9522509,9524755,9525851,9530941,9533456,9533826,9538116 Gene ID= ENSG00000017797.12 TPM= 5.28 Transcript Type= protein_coding chr18 9546790 9614896 9546790 9614896 - transcript208.chr18.nic@PPP4R1 transcript208.chr18.nic protein_coding 9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9562922,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546790 9614896,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9563046,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952 Gene ID= ENSG00000154845.15 TPM= 7.61 Transcript Type= NA chr18 9546790 9614687 9546790 9614687 - transcript209.chr18.nic@PPP4R1 transcript209.chr18.nic protein_coding 9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9562922,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546790 9614687,9614270,9595153,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9563046,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952 Gene ID= ENSG00000154845.15 TPM= 3.98 Transcript Type= NA chr18 9546790 9614566 9546790 9614566 - transcript215.chr18.nic@PPP4R1 transcript215.chr18.nic protein_coding 9614478,9614226,9595018,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546790 9614566,9614270,9595102,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952 Gene ID= ENSG00000154845.15 TPM= 3.98 Transcript Type= NA chr18 9546791 9614569 9546791 9614569 - ENST00000400555.7@PPP4R1 ENST00000400555.7 protein_coding 9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791 9614569,9614270,9595102,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952 Gene ID= ENSG00000154845.15 TPM= 12.13 Transcript Type= protein_coding chr18 9546791 9614558 9546791 9614558 - ENST00000400556.7@PPP4R1 ENST00000400556.7 protein_coding 9614478,9614226,9595018,9593768,9588711,9588089,9584721,9584515,9583117,9577064,9570157,9563378,9561980,9559419,9557221,9553322,9550278,9550052,9549197,9546791 9614558,9614270,9595153,9593874,9588853,9588235,9584828,9584580,9583275,9577191,9570683,9563550,9562075,9559604,9557382,9553422,9550398,9550186,9549338,9547952 Gene ID= ENSG00000154845.15 TPM= 12.13 Transcript Type= protein_coding chr18 9708165 9862551 9708165 9862551 + ENST00000578921.5@RAB31 ENST00000578921.5 protein_coding 9708165,9775278,9792154,9814020,9815116,9845582,9859228 9708444,9775357,9792235,9814091,9815222,9845691,9862551 Gene ID= ENSG00000168461.12 TPM= 328.89 Transcript Type= protein_coding chr18 9914002 9960021 9914002 9960021 + ENST00000400000.6@VAPA ENST00000400000.6 protein_coding 9914002,9931810,9936110,9936986,9950395,9954053 9914335,9931962,9936213,9937066,9950568,9960021 Gene ID= ENSG00000101558.13 TPM= 557.82 Transcript Type= protein_coding chr18 9914344 9956736 9914344 9956736 + transcript245.chr18.nnic@VAPA transcript245.chr18.nnic protein_coding 9914344,9931810,9936110,9936986,9950395,9954053 9915065,9931962,9936213,9937066,9950568,9956736 Gene ID= ENSG00000101558.13 TPM= 41.36 Transcript Type= NA chr18 10526038 10552768 10526038 10552768 + transcript257.chr18.nnic@NAPG transcript257.chr18.nnic protein_coding 10526038,10529001,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077 10526158,10529045,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552768 Gene ID= ENSG00000134265.12 TPM= 2.94 Transcript Type= NA chr18 10526411 10552768 10526411 10552768 + transcript258.chr18.nnic@NAPG transcript258.chr18.nnic protein_coding 10526411,10529001,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077 10526765,10529045,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552768 Gene ID= ENSG00000134265.12 TPM= 2.04 Transcript Type= NA chr18 10525893 10552768 10525893 10552768 + transcript260.chr18.nnic@NAPG transcript260.chr18.nnic protein_coding 10525893,10530770,10532711,10533522,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077 10526158,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552768 Gene ID= ENSG00000134265.12 TPM= 2.94 Transcript Type= NA chr18 10526034 10552760 10526034 10552760 + ENST00000322897.10@NAPG ENST00000322897.10 protein_coding 10526034,10530770,10532711,10533536,10534466,10539762,10539988,10540329,10546326,10548299,10548967,10550077 10526158,10530837,10532795,10533553,10534496,10539871,10540054,10540399,10546404,10548378,10549096,10552760 Gene ID= ENSG00000134265.12 TPM= 33.73 Transcript Type= protein_coding chr18 11689285 11885682 11689285 11885682 + transcript264.chr18.nnic@GNAL transcript264.chr18.nnic protein_coding 11689285,11752853,11753628,11753826,11824918,11862395,11864533,11867168,11868543,11872268,11876621,11880989,11883969 11689939,11752925,11753682,11753945,11825015,11862449,11864606,11867226,11868663,11872398,11876688,11882403,11885682 Gene ID= ENSG00000141404.15 TPM= 2.72 Transcript Type= NA chr18 11882622 11909223 11882622 11909223 - ENST00000588072.5@MPPE1 ENST00000588072.5 protein_coding 11908201,11906203,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11882622 11909223,11906309,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627 Gene ID= ENSG00000154889.16 TPM= 31.24 Transcript Type= protein_coding chr18 11883468 11908347 11883468 11908347 - transcript275.chr18.nic@MPPE1 transcript275.chr18.nic protein_coding 11908201,11896984,11893468,11889387,11888669,11886917,11886713,11886499,11885676,11883468 11908347,11897356,11893576,11889490,11888743,11887025,11886778,11886621,11885816,11884627 Gene ID= ENSG00000154889.16 TPM= 2.26 Transcript Type= NA chr18 11981452 12030879 11981452 12030879 + transcript284.chr18.nic@IMPA2 transcript284.chr18.nic protein_coding 11981452,11999054,12009883,12012170,12014265,12028043,12030343 11981765,11999187,12009987,12012215,12014373,12028993,12030879 Gene ID= ENSG00000141401.11 TPM= 2.72 Transcript Type= NA chr18 11981428 12030883 11981428 12030883 + ENST00000269159.7@IMPA2 ENST00000269159.7 protein_coding 11981428,11999054,12009883,12012170,12014265,12028043,12028842,12030343 11981765,11999187,12009987,12012215,12014373,12028151,12028993,12030883 Gene ID= ENSG00000141401.11 TPM= 37.13 Transcript Type= protein_coding chr18 12308059 12326619 12308059 12326619 + ENST00000317702.9@TUBB6 ENST00000317702.9 protein_coding 12308059,12308687,12310943,12325067 12308349,12308795,12311053,12326619 Gene ID= ENSG00000176014.12 TPM= 51.62 Transcript Type= protein_coding chr18 12308234 12329826 12308234 12329826 + ENST00000591909.5@TUBB6 ENST00000591909.5 protein_coding 12308234,12308687,12310943,12329146 12308349,12308795,12311053,12329826 Gene ID= ENSG00000176014.12 TPM= 2.72 Transcript Type= protein_coding chr18 12308241 12326563 12308241 12326563 + ENST00000417736.2@TUBB6 ENST00000417736.2 protein_coding 12308241,12310943,12325067 12308795,12311053,12326563 Gene ID= ENSG00000176014.12 TPM= 1.81 Transcript Type= retained_intron chr18 12328945 12377342 12328945 12377342 - transcript293.chr18.nnic@AFG3L2 transcript293.chr18.nnic protein_coding 12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12344132,12340201,12337341,12328945 12377342,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12344247,12340401,12337535,12329783 Gene ID= ENSG00000141385.9 TPM= 3.62 Transcript Type= NA chr18 12328960 12377270 12328960 12377270 - transcript294.chr18.nnic@AFG3L2 transcript294.chr18.nnic protein_coding 12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12344132,12337341,12328960 12377270,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247,12337535,12329783 Gene ID= ENSG00000141385.9 TPM= 3.62 Transcript Type= NA chr18 12328944 12377314 12328944 12377314 - ENST00000269143.7@AFG3L2 ENST00000269143.7 protein_coding 12376969,12371592,12370849,12367276,12366965,12363782,12359927,12358670,12356694,12353005,12351306,12351085,12348273,12344132,12340201,12337341,12328944 12377314,12371691,12370926,12367382,12367117,12363856,12360051,12358943,12356831,12353158,12351413,12351210,12348383,12344247,12340401,12337535,12329783 Gene ID= ENSG00000141385.9 TPM= 143.98 Transcript Type= protein_coding chr18 12446513 12658113 12446513 12658113 - transcript305.chr18.nic@SPIRE1 transcript305.chr18.nic protein_coding 12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12459755,12454346,12453068,12452485,12452255,12446513 12658113,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12459928,12454483,12453138,12452512,12452391,12449896 Gene ID= ENSG00000134278.15 TPM= 5.43 Transcript Type= NA chr18 12446512 12658134 12446512 12658134 - ENST00000409402.8@SPIRE1 ENST00000409402.8 protein_coding 12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12485959,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446512 12658134,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12486000,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896 Gene ID= ENSG00000134278.15 TPM= 4.07 Transcript Type= protein_coding chr18 12446513 12658045 12446513 12658045 - ENST00000410092.7@SPIRE1 ENST00000410092.7 protein_coding 12657530,12635062,12546674,12535476,12512454,12506477,12496016,12493072,12479699,12464868,12463351,12454346,12453068,12452485,12452255,12446513 12658045,12635096,12546904,12535601,12512531,12506641,12496102,12493201,12479871,12464958,12463493,12454483,12453138,12452512,12452391,12449896 Gene ID= ENSG00000134278.15 TPM= 21.28 Transcript Type= protein_coding chr18 12658195 12663658 12658195 12663658 + transcript320.chr18.nic@PSMG2 transcript320.chr18.nic protein_coding 12658195,12658574,12663458 12658343,12658773,12663658 Gene ID= ENSG00000128789.20 TPM= 2.72 Transcript Type= NA chr18 12673098 12702724 12673098 12702724 - transcript314.chr18.nic@CEP76 transcript314.chr18.nic protein_coding 12702486,12700958,12699830,12698979,12697223,12695254,12691359,12686262,12680662,12678109,12674536,12673098 12702724,12701113,12699905,12699165,12697408,12695351,12691487,12686450,12680828,12678442,12674753,12673503 Gene ID= ENSG00000101624.10 TPM= 1.81 Transcript Type= NA chr18 12702426 12725740 12702426 12725740 + ENST00000317615.10@PSMG2 ENST00000317615.10 protein_coding 12702426,12706550,12712702,12718517,12720510,12724499,12725439 12703164,12706721,12712760,12718635,12720683,12724619,12725740 Gene ID= ENSG00000128789.20 TPM= 68.82 Transcript Type= protein_coding chr18 12785478 12884338 12785478 12884338 - ENST00000327283.7@PTPN2 ENST00000327283.7 protein_coding 12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12794384,12785478 12884338,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485,12785844 Gene ID= ENSG00000175354.18 TPM= 12.68 Transcript Type= protein_coding chr18 12792153 12884235 12792153 12884235 - ENST00000309660.9@PTPN2 ENST00000309660.9 protein_coding 12884073,12859164,12836791,12830943,12825810,12817156,12814203,12801970,12792153 12884235,12859254,12836891,12831041,12825944,12817365,12814355,12802151,12794485 Gene ID= ENSG00000175354.18 TPM= 4.53 Transcript Type= protein_coding chr18 12947995 12987536 12947995 12987536 + ENST00000262124.15@SEH1L ENST00000262124.15 protein_coding 12947995,12951855,12955463,12963160,12971153,12978752,12982518,12984040,12985240 12948232,12951905,12955609,12963371,12971251,12978892,12982675,12984190,12987536 Gene ID= ENSG00000085415.15 TPM= 19.02 Transcript Type= protein_coding chr18 12991362 13125036 12991362 13125036 + ENST00000506447.5@CEP192 ENST00000506447.5 protein_coding 12991362,12999421,13001457,13008456,13012973,13015328,13017188,13018480,13019082,13029663,13030465,13037237,13038370,13040830,13042204,13048859,13049765,13052919,13055780,13057585,13059082,13067831,13068094,13068359,13068852,13069089,13069738,13071039,13072755,13073009,13087017,13087531,13089456,13092377,13095503,13096184,13099476,13100305,13103509,13104984,13113586,13114130,13116377,13117585,13124632 12991437,12999588,13001582,13008631,13013025,13015448,13017336,13018615,13019206,13030002,13030608,13037301,13038579,13040956,13042334,13049681,13049891,13053090,13056698,13057733,13059312,13067956,13068237,13068422,13068991,13069181,13069856,13071212,13072845,13073185,13087277,13087646,13089565,13092527,13095681,13096307,13099581,13100512,13103588,13105079,13113705,13114251,13116503,13117643,13125036 Gene ID= ENSG00000101639.18 TPM= 1.81 Transcript Type= protein_coding chr18 13217435 13646739 13217435 13646739 + transcript337.chr18.nic@LDLRAD4 transcript337.chr18.nic protein_coding 13217435,13278105,13387341,13438244,13621117,13643359,13645127 13217774,13278188,13387762,13438384,13621271,13643412,13646739 Gene ID= ENSG00000168675.18 TPM= 2.26 Transcript Type= NA chr18 13217643 13646739 13217643 13646739 + transcript338.chr18.nic@LDLRAD4 transcript338.chr18.nic protein_coding 13217643,13278105,13387341,13438244,13621117,13643359,13645127 13218094,13278188,13387762,13438384,13621271,13643412,13646739 Gene ID= ENSG00000168675.18 TPM= 8.6 Transcript Type= NA chr18 13218225 13646739 13218225 13646739 + transcript340.chr18.nnic@LDLRAD4 transcript340.chr18.nnic protein_coding 13218225,13278105,13387341,13438244,13621117,13643359,13645127 13218271,13278188,13387762,13438384,13621271,13643412,13646739 Gene ID= ENSG00000168675.18 TPM= 2.26 Transcript Type= NA chr18 13218774 13646739 13218774 13646739 + transcript341.chr18.nic@LDLRAD4 transcript341.chr18.nic protein_coding 13218774,13278105,13387341,13438244,13621117,13643359,13645127 13218988,13278188,13387762,13438384,13621271,13643412,13646739 Gene ID= ENSG00000168675.18 TPM= 2.26 Transcript Type= NA chr18 13663351 13726586 13663351 13726586 - transcript344.chr18.nic@FAM210A transcript344.chr18.nic protein_coding 13726329,13681605,13671862,13670871,13663351 13726586,13682105,13671973,13670968,13666713 Gene ID= ENSG00000177150.12 TPM= 2.42 Transcript Type= NA chr18 13663351 13726592 13663351 13726592 - ENST00000402563.5@FAM210A ENST00000402563.5 protein_coding 13726329,13681605,13671862,13663351 13726592,13682105,13671973,13666713 Gene ID= ENSG00000177150.12 TPM= 10.57 Transcript Type= protein_coding chr18 13663347 13726560 13663347 13726560 - ENST00000322247.7@FAM210A ENST00000322247.7 protein_coding 13726329,13697547,13681605,13671862,13663347 13726560,13697674,13682105,13671973,13666713 Gene ID= ENSG00000177150.12 TPM= 1.51 Transcript Type= protein_coding chr18 13726661 13764558 13726661 13764558 + ENST00000383314.6@RNMT ENST00000383314.6 protein_coding 13726661,13730627,13731476,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13759942 13726729,13730755,13731934,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13764558 Gene ID= ENSG00000101654.17 TPM= 3.62 Transcript Type= protein_coding chr18 13726672 13764553 13726672 13764553 + transcript350.chr18.nnic@RNMT transcript350.chr18.nnic protein_coding 13726672,13730627,13734464,13737010,13740167,13741510,13742488,13746220,13752326,13754114,13759942 13726729,13730755,13734599,13737135,13740279,13741691,13742652,13746337,13752427,13754147,13764553 Gene ID= ENSG00000101654.17 TPM= 1.81 Transcript Type= NA chr18 13882721 13915588 13882721 13915588 - transcript356.chr18.nnic@MC2R transcript356.chr18.nnic protein_coding 13915488,13893540,13882721 13915588,13893696,13885646 Gene ID= ENSG00000185231.4 TPM= 1.81 Transcript Type= NA chr18 13883968 13915582 13883968 13915582 - transcript359.chr18.nnic@MC2R transcript359.chr18.nnic protein_coding 13915488,13894647,13883968 13915582,13895178,13885646 Gene ID= ENSG00000185231.4 TPM= 1.81 Transcript Type= NA chr18 13882044 13915540 13882044 13915540 - ENST00000327606.3@MC2R ENST00000327606.3 protein_coding 13915488,13882044 13915540,13885646 Gene ID= ENSG00000185231.4 TPM= 174.77 Transcript Type= protein_coding chr18 21529285 21600822 21529285 21600822 - transcript374.chr18.nnic@ESCO1 transcript374.chr18.nnic protein_coding 21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21536042,21532473,21529285 21600822,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21536185,21532660,21530490 Gene ID= ENSG00000141446.10 TPM= 1.81 Transcript Type= NA chr18 21529281 21600736 21529281 21600736 - ENST00000269214.9@ESCO1 ENST00000269214.9 protein_coding 21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21539920,21536042,21532473,21529281 21600736,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21540009,21536185,21532660,21530490 Gene ID= ENSG00000141446.10 TPM= 6.34 Transcript Type= protein_coding chr18 21529303 21600884 21529303 21600884 - ENST00000383276.1@ESCO1 ENST00000383276.1 protein_coding 21600623,21584310,21575672,21573314,21567980,21566146,21564203,21560859,21540577,21539920,21536042,21532473,21529303 21600884,21584440,21575777,21575430,21568094,21566206,21564317,21560990,21540700,21540009,21536185,21532660,21530490 Gene ID= ENSG00000141446.10 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr18 21612267 21633524 21612267 21633524 + ENST00000300413.9@SNRPD1 ENST00000300413.9 protein_coding 21612267,21622725,21623748,21629062 21612443,21622801,21623939,21633524 Gene ID= ENSG00000167088.10 TPM= 44.37 Transcript Type= protein_coding chr18 21650897 21704805 21650897 21704805 - ENST00000289119.6@ABHD3 ENST00000289119.6 protein_coding 21704504,21703584,21702316,21683920,21664118,21659170,21657104,21656861,21650897 21704805,21703747,21702498,21683965,21664230,21659343,21657152,21657026,21651763 Gene ID= ENSG00000158201.9 TPM= 18.11 Transcript Type= protein_coding chr18 22166898 22170275 22166898 22170275 - transcript407.chr18.nnic@GATA6-AS1 transcript407.chr18.nnic lincRNA 22169409,22168311,22168044,22167604,22166898 22170275,22168383,22168162,22167803,22167308 Gene ID= ENSG00000266010.1 TPM= 7.43 Transcript Type= NA chr18 22166898 22169028 22166898 22169028 - transcript408.chr18.nnic@GATA6-AS1 transcript408.chr18.nnic lincRNA 22168667,22168311,22168086,22167604,22166898 22169028,22168383,22168162,22167803,22167308 Gene ID= ENSG00000266010.1 TPM= 1.99 Transcript Type= NA chr18 22166898 22169457 22166898 22169457 - transcript413.chr18.nic@GATA6-AS1 transcript413.chr18.nic lincRNA 22168667,22168311,22167604,22166898 22169457,22168383,22168162,22167308 Gene ID= ENSG00000266010.1 TPM= 4.1 Transcript Type= NA chr18 22166898 22170119 22166898 22170119 - transcript414.chr18.nnic@GATA6-AS1 transcript414.chr18.nnic lincRNA 22169409,22168311,22167604,22166898 22170119,22168383,22168162,22167308 Gene ID= ENSG00000266010.1 TPM= 2.29 Transcript Type= NA chr18 22166898 22168549 22166898 22168549 - transcript416.chr18.nic@GATA6-AS1 transcript416.chr18.nic lincRNA 22168311,22167604,22166898 22168549,22168162,22167308 Gene ID= ENSG00000266010.1 TPM= 5.91 Transcript Type= NA chr18 22166898 22169346 22166898 22169346 - transcript417.chr18.nic@GATA6-AS1 transcript417.chr18.nic lincRNA 22168667,22168311,22166898 22169346,22168383,22168162 Gene ID= ENSG00000266010.1 TPM= 4.53 Transcript Type= NA chr18 22167413 22169884 22167413 22169884 - transcript418.chr18.nnic@GATA6-AS1 transcript418.chr18.nnic lincRNA 22169409,22168311,22167413 22169884,22168383,22168162 Gene ID= ENSG00000266010.1 TPM= 1.81 Transcript Type= NA chr18 22166898 22168968 22166898 22168968 - ENST00000583490.1@GATA6-AS1 ENST00000583490.1 lincRNA 22168667,22166898 22168968,22168383 Gene ID= ENSG00000266010.1 TPM= 2.72 Transcript Type= lincRNA chr18 22169985 22201987 22169985 22201987 + transcript399.chr18.nnic@GATA6 transcript399.chr18.nnic protein_coding 22169985,22171108,22176955,22181453,22182757,22182940,22200656 22170357,22172279,22177121,22181578,22182844,22183043,22201987 Gene ID= ENSG00000141448.8 TPM= 13.88 Transcript Type= NA chr18 22173417 22201981 22173417 22201981 + transcript403.chr18.nnic@GATA6 transcript403.chr18.nnic protein_coding 22173417,22176955,22181453,22182757,22182940,22200656 22175071,22177121,22181578,22182844,22183043,22201981 Gene ID= ENSG00000141448.8 TPM= 7.24 Transcript Type= NA chr18 22169443 22202528 22169443 22202528 + ENST00000269216.7@GATA6 ENST00000269216.7 protein_coding 22169443,22171108,22176955,22181453,22182757,22182940,22200656 22169682,22172279,22177121,22181578,22182844,22183043,22202528 Gene ID= ENSG00000141448.8 TPM= 310 Transcript Type= protein_coding chr18 22695130 22703626 22695130 22703626 + transcript424.chr18.nnic@NA transcript424.chr18.nnic NA 22695130,22696217,22702908 22695192,22696881,22703626 Gene ID= novel_gene_chr18_425 TPM= 1.81 Transcript Type= NA chr18 22993151 23026477 22993151 23026477 + transcript426.chr18.nic@RBBP8 transcript426.chr18.nic protein_coding 22993151,22993721,22996374,22997620,23001586,23006363,23016828,23022129,23026143 22993639,22993847,22996462,22997734,23001729,23006432,23016924,23022270,23026477 Gene ID= ENSG00000101773.18 TPM= 1.81 Transcript Type= NA chr18 23296017 23437971 23296017 23437971 - transcript439.chr18.nic@TMEM241 transcript439.chr18.nic protein_coding 23437781,23430631,23399566,23384990,23377646,23373712,23371422,23370216,23365634,23356594,23352196,23309680,23296017 23437971,23430677,23399647,23385067,23377671,23373763,23371470,23370261,23365668,23356663,23352289,23309744,23298067 Gene ID= ENSG00000134490.13 TPM= 1.81 Transcript Type= NA chr18 23452823 23483140 23452823 23483140 + ENST00000339486.7@RIOK3 ENST00000339486.7 protein_coding 23452823,23462964,23463967,23464206,23464519,23466133,23467399,23473429,23474948,23477006,23477179,23479317,23481172 23453502,23463079,23464112,23464313,23464628,23466276,23467526,23473626,23475107,23477086,23477268,23479424,23483140 Gene ID= ENSG00000101782.14 TPM= 67.01 Transcript Type= protein_coding chr18 23503523 23531781 23503523 23531781 + transcript470.chr18.nnic@C18orf8 transcript470.chr18.nnic protein_coding 23503523,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530207,23530387,23531625 23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531781 Gene ID= ENSG00000141452.9 TPM= 1.81 Transcript Type= NA chr18 23503520 23531781 23503520 23531781 + transcript473.chr18.nic@C18orf8 transcript473.chr18.nic protein_coding 23503520,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530511,23531625 23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531781 Gene ID= ENSG00000141452.9 TPM= 1.81 Transcript Type= NA chr18 23503464 23531781 23503464 23531781 + transcript478.chr18.nic@C18orf8 transcript478.chr18.nic protein_coding 23503464,23504371,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625 23503720,23504447,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531781 Gene ID= ENSG00000141452.9 TPM= 3.17 Transcript Type= NA chr18 23503509 23531782 23503509 23531782 + ENST00000269221.7@C18orf8 ENST00000269221.7 protein_coding 23503509,23504371,23506970,23507985,23509193,23515856,23516320,23518890,23519069,23520202,23524130,23524429,23526637,23527795,23529179,23529635,23530028,23530229,23530387,23531625 23503720,23504447,23507054,23508041,23509279,23515996,23516423,23518979,23519174,23520313,23524174,23524482,23526765,23527901,23529298,23529712,23530132,23530297,23530612,23531782 Gene ID= ENSG00000141452.9 TPM= 15.85 Transcript Type= protein_coding chr18 23506190 23586482 23506190 23586482 - transcript449.chr18.nic@NPC1 transcript449.chr18.nic protein_coding 23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23506190 23586482,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23506642 Gene ID= ENSG00000141458.12 TPM= 3.62 Transcript Type= NA chr18 23531501 23586913 23531501 23586913 - transcript459.chr18.nic@NPC1 transcript459.chr18.nic protein_coding 23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23531501 23586913,23573574,23572180,23568998,23561527,23560480,23557190,23556664,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23532284 Gene ID= ENSG00000141458.12 TPM= 5.43 Transcript Type= NA chr18 23533186 23586913 23533186 23586913 - transcript466.chr18.nic@NPC1 transcript466.chr18.nic protein_coding 23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533186 23586913,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517 Gene ID= ENSG00000141458.12 TPM= 5.43 Transcript Type= NA chr18 23531437 23586898 23531437 23586898 - ENST00000269228.9@NPC1 ENST00000269228.9 protein_coding 23586287,23573452,23572074,23568823,23561360,23560231,23557117,23556243,23554758,23551627,23548006,23544960,23544344,23543455,23541306,23541068,23540448,23539811,23539355,23538542,23536673,23535469,23534446,23533355,23531437 23586898,23573574,23572180,23568998,23561527,23560480,23557190,23556613,23554984,23551727,23548108,23545149,23544526,23543569,23541433,23541208,23540537,23540001,23539470,23538671,23536876,23535700,23534559,23533517,23532284 Gene ID= ENSG00000141458.12 TPM= 62.48 Transcript Type= protein_coding chr18 23598926 23662885 23598926 23662885 - ENST00000592179.5@ANKRD29 ENST00000592179.5 protein_coding 23662710,23649083,23646189,23638849,23634051,23629853,23619531,23617732,23612092,23598926 23662885,23649193,23646287,23638947,23634149,23629951,23619629,23617827,23612190,23601309 Gene ID= ENSG00000154065.16 TPM= 2.26 Transcript Type= protein_coding chr18 23598925 23619772 23598925 23619772 - transcript482.chr18.nic@ANKRD29 transcript482.chr18.nic protein_coding 23619395,23617732,23612092,23598925 23619772,23617827,23612190,23601309 Gene ID= ENSG00000154065.16 TPM= 5.89 Transcript Type= NA chr18 23598925 23619800 23598925 23619800 - transcript483.chr18.nic@ANKRD29 transcript483.chr18.nic protein_coding 23619531,23617732,23612092,23598925 23619800,23617827,23612190,23601309 Gene ID= ENSG00000154065.16 TPM= 5.89 Transcript Type= NA chr18 23598927 23619800 23598927 23619800 - transcript485.chr18.nic@ANKRD29 transcript485.chr18.nic protein_coding 23619531,23617732,23598927 23619800,23617827,23601309 Gene ID= ENSG00000154065.16 TPM= 3.17 Transcript Type= NA chr18 24014420 24020288 24014420 24020288 + ENST00000584250.1@TTC39C ENST00000584250.1 protein_coding 24014420,24019860 24015038,24020288 Gene ID= ENSG00000168234.12 TPM= 11.77 Transcript Type= protein_coding chr18 24014636 24133028 24014636 24133028 + ENST00000317571.7@TTC39C ENST00000317571.7 protein_coding 24014636,24064140,24066012,24069157,24080585,24082913,24114554,24118125,24123834,24125427,24128886,24130313,24131882,24132485 24015038,24064188,24066140,24069271,24080939,24083081,24114647,24118232,24123943,24125550,24128983,24130417,24131920,24133028 Gene ID= ENSG00000168234.12 TPM= 7.24 Transcript Type= protein_coding chr18 24138956 24161603 24138956 24161603 + ENST00000399496.7@CABYR ENST00000399496.7 protein_coding 24138956,24143091,24143360,24155701,24159472,24161516 24139118,24143259,24143413,24156042,24160069,24161603 Gene ID= ENSG00000154040.20 TPM= 4.53 Transcript Type= protein_coding chr18 24139095 24161597 24139095 24161597 + ENST00000621648.4@CABYR ENST00000621648.4 protein_coding 24139095,24143091,24143360,24155701,24159472,24161516 24139118,24143259,24143413,24156999,24160069,24161597 Gene ID= ENSG00000154040.20 TPM= 3.62 Transcript Type= protein_coding chr18 24162044 24397859 24162044 24397859 - ENST00000319481.7@OSBPL1A ENST00000319481.7 protein_coding 24397655,24377413,24368287,24366892,24341547,24334245,24332942,24318748,24318601,24317327,24317149,24314249,24311984,24303637,24280842,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162044 24397859,24377535,24368372,24366966,24341658,24334330,24333086,24318809,24318645,24317400,24317212,24314347,24312106,24303718,24280948,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281 Gene ID= ENSG00000141447.17 TPM= 17.5 Transcript Type= protein_coding chr18 24162045 24272232 24162045 24272232 - ENST00000399443.7@OSBPL1A ENST00000399443.7 protein_coding 24271622,24239220,24225042,24196125,24181145,24179738,24178013,24172376,24171409,24170327,24167329,24166579,24165065,24162045 24272232,24239382,24225198,24196200,24181279,24179835,24178195,24172483,24171498,24170453,24167445,24166702,24165155,24163281 Gene ID= ENSG00000141447.17 TPM= 112.59 Transcript Type= protein_coding chr18 24426696 24453526 24426696 24453526 + transcript503.chr18.nnic@IMPACT transcript503.chr18.nnic protein_coding 24426696,24427919,24428869,24430322,24437955,24440496,24443049,24445393,24448093,24449819,24450779,24451361 24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24450814,24453526 Gene ID= ENSG00000154059.9 TPM= 2.11 Transcript Type= NA chr18 24426645 24453540 24426645 24453540 + transcript505.chr18.nnic@IMPACT transcript505.chr18.nnic protein_coding 24426645,24427919,24428869,24430322,24437955,24440496,24443100,24445393,24448093,24449819,24450779 24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24453540 Gene ID= ENSG00000154059.9 TPM= 3.92 Transcript Type= NA chr18 24426616 24453535 24426616 24453535 + ENST00000284202.8@IMPACT ENST00000284202.8 protein_coding 24426616,24427919,24428869,24430322,24437955,24440496,24443049,24445393,24448093,24449819,24450779 24426792,24428047,24428921,24430384,24438040,24440618,24443152,24445466,24448183,24449953,24453535 Gene ID= ENSG00000154059.9 TPM= 44.67 Transcript Type= protein_coding chr18 25061923 25352146 25061923 25352146 - transcript512.chr18.nic@ZNF521 transcript512.chr18.nic protein_coding 25350907,25322008,25224345,25195160,25091950,25089465,25061923 25352146,25322187,25227697,25195244,25092081,25089580,25062741 Gene ID= ENSG00000198795.10 TPM= 10.87 Transcript Type= NA chr18 25061926 25352152 25061926 25352152 - ENST00000361524.7@ZNF521 ENST00000361524.7 protein_coding 25352005,25350907,25322008,25224345,25195160,25091950,25089465,25061926 25352152,25350947,25322187,25227697,25195244,25092081,25089580,25062741 Gene ID= ENSG00000198795.10 TPM= 16.3 Transcript Type= protein_coding chr18 26016248 26091330 26016248 26091330 - transcript541.chr18.nic@SS18 transcript541.chr18.nic protein_coding 26091096,26087501,26078076,26057589,26052624,26039289,26038555,26035005,26032399,26016248 26091330,26087577,26078160,26057742,26052845,26039456,26038659,26035127,26032532,26018380 Gene ID= ENSG00000141380.13 TPM= 8.26 Transcript Type= NA chr18 26016248 26090647 26016248 26090647 - transcript542.chr18.nic@SS18 transcript542.chr18.nic protein_coding 26090501,26087501,26078076,26057589,26052624,26039289,26038555,26035005,26032399,26016248 26090647,26087577,26078160,26057742,26052845,26039456,26038659,26035923,26032532,26018380 Gene ID= ENSG00000141380.13 TPM= 4.64 Transcript Type= NA chr18 26016253 26090625 26016253 26090625 - ENST00000415083.6@SS18 ENST00000415083.6 protein_coding 26090501,26087501,26078076,26057589,26052624,26039289,26038555,26035831,26035005,26032399,26016253 26090625,26087577,26078160,26057742,26052845,26039456,26038659,26035923,26035127,26032532,26018380 Gene ID= ENSG00000141380.13 TPM= 77.99 Transcript Type= protein_coding chr18 26225936 26391685 26225936 26391685 + ENST00000269142.9@TAF4B ENST00000269142.9 protein_coding 26225936,26265170,26267516,26274663,26274931,26281971,26285882,26292246,26293426,26315229,26321070,26327015,26335175,26357690,26389845 26227276,26265315,26267623,26274824,26275053,26282060,26286499,26292381,26293531,26315398,26321200,26327140,26335231,26357794,26391685 Gene ID= ENSG00000141384.12 TPM= 8.15 Transcript Type= protein_coding chr18 26454974 26549435 26454974 26549435 - ENST00000408011.7@KCTD1 ENST00000408011.7 protein_coding 26548891,26501072,26476515,26459620,26454974 26549435,26501250,26476659,26459925,26455901 Gene ID= ENSG00000134504.12 TPM= 13.58 Transcript Type= protein_coding chr18 31498043 31549008 31498043 31549008 + ENST00000261590.12@DSG2 ENST00000261590.12 protein_coding 31498043,31518239,31519803,31520803,31521099,31522083,31524448,31524703,31530987,31535270,31536202,31538751,31541193,31542520,31545721 31498296,31518274,31519937,31520964,31521243,31522249,31524585,31524888,31531252,31535412,31536429,31538978,31541314,31542852,31549008 Gene ID= ENSG00000046604.12 TPM= 8.15 Transcript Type= protein_coding chr18 31622247 31724663 31622247 31724663 - transcript572.chr18.nnic@B4GALT6 transcript572.chr18.nnic protein_coding 31724494,31714823,31666256,31657976,31645355,31638644,31630959,31626999,31626283,31622247 31724663,31714934,31666372,31658089,31645479,31638760,31631146,31627121,31626384,31625761 Gene ID= ENSG00000118276.11 TPM= 5.43 Transcript Type= NA chr18 32018372 32073213 32018372 32073213 + ENST00000217740.3@RNF125 ENST00000217740.3 protein_coding 32018372,32037116,32042179,32045642,32065902,32068298 32019027,32037269,32042273,32045732,32066009,32073213 Gene ID= ENSG00000101695.8 TPM= 1.81 Transcript Type= protein_coding chr18 32091855 32131561 32091855 32131561 + ENST00000261593.7@RNF138 ENST00000261593.7 protein_coding 32091855,32092700,32111754,32113745,32123518,32124734,32126693,32129119 32092235,32092886,32111919,32113860,32123574,32124845,32126800,32131561 Gene ID= ENSG00000134758.13 TPM= 12.68 Transcript Type= protein_coding chr18 32092690 32130715 32092690 32130715 + ENST00000257190.9@RNF138 ENST00000257190.9 protein_coding 32092690,32123518,32124734,32126693,32129119 32092886,32123574,32124845,32126800,32130715 Gene ID= ENSG00000134758.13 TPM= 1.81 Transcript Type= protein_coding chr18 32263522 32470711 32263522 32470711 - transcript588.chr18.nnic@GAREM1 transcript588.chr18.nnic protein_coding 32470308,32392895,32379212,32310193,32287031,32270217,32263522 32470711,32393035,32379326,32310323,32288203,32270383,32268765 Gene ID= ENSG00000141441.15 TPM= 8.6 Transcript Type= NA chr18 32263522 32470888 32263522 32470888 - transcript593.chr18.nnic@GAREM1 transcript593.chr18.nnic protein_coding 32470308,32392895,32310193,32270217,32263522 32470888,32393035,32310323,32270383,32268765 Gene ID= ENSG00000141441.15 TPM= 5.89 Transcript Type= NA chr18 34710242 34891392 34710242 34891392 + transcript596.chr18.nic@DTNA transcript596.chr18.nic protein_coding 34710242,34755976,34765961,34794037,34806219,34811959,34815909,34818164,34820791,34827593,34848296,34851831,34858285,34863966,34875239,34877719,34879551,34882069,34884728,34887766 34710445,34756043,34766041,34794250,34806304,34812113,34816014,34818330,34820915,34827676,34848383,34851928,34858398,34864062,34875398,34877808,34879719,34882201,34884776,34891392 Gene ID= ENSG00000134769.21 TPM= 5.43 Transcript Type= NA chr18 34976928 35143466 34976928 35143466 + ENST00000413393.5@MAPRE2 ENST00000413393.5 protein_coding 34976928,35005492,35070195,35097446,35101946,35126948,35132032,35140295 34977079,35005553,35070322,35097591,35102159,35127087,35132190,35143466 Gene ID= ENSG00000166974.12 TPM= 23.54 Transcript Type= protein_coding chr18 35041360 35143470 35041360 35143470 + ENST00000300249.9@MAPRE2 ENST00000300249.9 protein_coding 35041360,35070195,35097446,35101946,35126948,35132032,35140295 35041661,35070322,35097591,35102159,35127087,35132190,35143470 Gene ID= ENSG00000166974.12 TPM= 80.59 Transcript Type= protein_coding chr18 35241037 35244100 35241037 35244100 + ENST00000591206.5@ZNF397 ENST00000591206.5 protein_coding 35241037,35242391,35243152 35241109,35242884,35244100 Gene ID= ENSG00000186812.12 TPM= 2.72 Transcript Type= protein_coding chr18 35251066 35290208 35251066 35290208 - ENST00000333206.9@ZSCAN30 ENST00000333206.9 protein_coding 35290084,35263945,35263513,35251066 35290208,35264455,35263657,35254381 Gene ID= ENSG00000186814.13 TPM= 3.62 Transcript Type= protein_coding chr18 35290282 35310766 35290282 35310766 + ENST00000399070.3@ZNF271P ENST00000399070.3 transcribed_unitary_pseudogene 35290282,35291010,35305976 35290391,35291232,35310766 Gene ID= ENSG00000257267.3 TPM= 36.22 Transcript Type= processed_transcript chr18 35332227 35344456 35332227 35344456 - ENST00000399061.3@ZNF24 ENST00000399061.3 protein_coding 35344370,35340231,35339829,35332227 35344456,35340733,35339976,35337770 Gene ID= ENSG00000172466.15 TPM= 32.6 Transcript Type= protein_coding chr18 35332212 35344456 35332212 35344456 - ENST00000261332.10@ZNF24 ENST00000261332.10 protein_coding 35344360,35340231,35339829,35332212 35344456,35340733,35339976,35337770 Gene ID= ENSG00000172466.15 TPM= 8.15 Transcript Type= protein_coding chr18 35368471 35377337 35368471 35377337 - ENST00000589332.5@ZNF396 ENST00000589332.5 protein_coding 35377278,35373876,35373456,35368471 35377337,35374364,35373600,35369660 Gene ID= ENSG00000186496.10 TPM= 2.72 Transcript Type= protein_coding chr18 35468333 35497991 35468333 35497991 - ENST00000334598.11@INO80C ENST00000334598.11 protein_coding 35497719,35480453,35479300,35478282,35468333 35497991,35480563,35479411,35478349,35468742 Gene ID= ENSG00000153391.15 TPM= 16.3 Transcript Type= protein_coding chr18 35581591 35711830 35581591 35711830 + transcript624.chr18.nnic@GALNT1 transcript624.chr18.nnic protein_coding 35581591,35627431,35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624 35581862,35627484,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35711830 Gene ID= ENSG00000141429.13 TPM= 10.87 Transcript Type= NA chr18 35581096 35713361 35581096 35713361 + transcript626.chr18.nic@GALNT1 transcript626.chr18.nic protein_coding 35581096,35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624 35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35713361 Gene ID= ENSG00000141429.13 TPM= 64.29 Transcript Type= NA chr18 35581484 35710994 35581484 35710994 + transcript628.chr18.nnic@GALNT1 transcript628.chr18.nnic protein_coding 35581484,35654658,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624 35581862,35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35710994 Gene ID= ENSG00000141429.13 TPM= 4.53 Transcript Type= NA chr18 35654560 35711834 35654560 35711834 + ENST00000269195.5@GALNT1 ENST00000269195.5 protein_coding 35654560,35663628,35677591,35683391,35687016,35689173,35691012,35692181,35702897,35703509,35709624 35654801,35663802,35677757,35683598,35687186,35689290,35691192,35692320,35702995,35703643,35711834 Gene ID= ENSG00000141429.13 TPM= 9.06 Transcript Type= protein_coding chr18 35972625 35979286 35972625 35979286 + ENST00000610527.4@C18orf21 ENST00000610527.4 protein_coding 35972625,35974896,35977410,35978835 35972840,35975095,35977600,35979286 Gene ID= ENSG00000141428.16 TPM= 2.72 Transcript Type= protein_coding chr18 35989824 36067576 35989824 36067576 - ENST00000399022.8@RPRD1A ENST00000399022.8 protein_coding 36067254,36033708,36030991,36030808,36027184,36026900,35989824 36067576,36033837,36031097,36030905,36027310,36027075,35993300 Gene ID= ENSG00000141425.17 TPM= 61.12 Transcript Type= protein_coding chr18 35989824 36067553 35989824 36067553 - transcript638.chr18.nnic@RPRD1A transcript638.chr18.nnic protein_coding 36067254,36030991,36030808,36027184,36026900,35989824 36067553,36031097,36030905,36027310,36027075,35993300 Gene ID= ENSG00000141425.17 TPM= 7.7 Transcript Type= NA chr18 36108532 36129318 36108532 36129318 - ENST00000269187.9@SLC39A6 ENST00000269187.9 protein_coding 36129114,36126219,36124520,36123495,36122052,36116674,36114097,36112501,36111059,36108532 36129318,36127016,36124700,36123664,36122270,36116779,36114474,36112581,36111249,36109745 Gene ID= ENSG00000141424.12 TPM= 25.36 Transcript Type= protein_coding chr18 36129871 36180556 36129871 36180556 + ENST00000358232.10@ELP2 ENST00000358232.10 protein_coding 36129871,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485 36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36180556 Gene ID= ENSG00000134759.13 TPM= 57.95 Transcript Type= protein_coding chr18 36129885 36174644 36129885 36174644 + transcript651.chr18.nnic@ELP2 transcript651.chr18.nnic protein_coding 36129885,36133238,36136307,36138270,36138795,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36171047,36174485 36130071,36133316,36136377,36138426,36138872,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36171160,36174644 Gene ID= ENSG00000134759.13 TPM= 1.81 Transcript Type= NA chr18 36129898 36174651 36129898 36174651 + ENST00000442325.6@ELP2 ENST00000442325.6 protein_coding 36129898,36133238,36136307,36138270,36138795,36139419,36141137,36142281,36142826,36144939,36145948,36146250,36154850,36156466,36158835,36159735,36159958,36160932,36164475,36167101,36170063,36171047,36174485 36130071,36133316,36136377,36138426,36138872,36139613,36141201,36142347,36142966,36145034,36146048,36146381,36154999,36156654,36158904,36159830,36160015,36161004,36164667,36167222,36170196,36171160,36174651 Gene ID= ENSG00000134759.13 TPM= 8.15 Transcript Type= protein_coding chr18 36179996 36187448 36179996 36187448 - ENST00000568654.1@AC023043.1 ENST00000568654.1 antisense_RNA 36187235,36179996 36187448,36180390 Gene ID= ENSG00000260552.1 TPM= 11.77 Transcript Type= antisense_RNA chr18 36187497 36268720 36187497 36268720 + transcript664.chr18.nnic@MOCOS transcript664.chr18.nnic protein_coding 36187497,36198690,36199683,36203113,36205077,36213366,36215516,36220055,36248922,36251159,36256968,36260037,36266749,36268533 36187681,36198756,36200324,36203189,36205276,36213482,36215977,36220217,36249000,36251283,36257073,36260175,36266853,36268720 Gene ID= ENSG00000075643.5 TPM= 2.72 Transcript Type= NA chr18 36297725 36780061 36297725 36780061 + transcript672.chr18.nic@FHOD3 transcript672.chr18.nic protein_coding 36297725,36355539,36372680,36501932,36512438,36576451,36594787,36602674,36611952,36625511,36681436,36687128,36693209,36709095,36717832,36730646,36740656,36742737,36744032,36746945,36755119,36760608,36769265,36779448 36298000,36355645,36372744,36501999,36512543,36576545,36594898,36602768,36612095,36625749,36681570,36687178,36693423,36709391,36718715,36730804,36740838,36742856,36744193,36747135,36755311,36760782,36769426,36780061 Gene ID= ENSG00000134775.15 TPM= 3.32 Transcript Type= NA chr18 36297673 36780061 36297673 36780061 + transcript675.chr18.nic@FHOD3 transcript675.chr18.nic protein_coding 36297673,36355539,36372680,36501932,36512438,36576451,36594787,36602674,36611952,36625511,36681436,36693209,36709095,36717832,36730646,36740656,36742737,36744032,36746945,36755119,36760608,36769265,36779448 36298000,36355645,36372744,36501999,36512543,36576545,36594898,36602768,36612095,36625749,36681570,36693423,36709391,36718715,36730804,36740838,36742856,36744193,36747135,36755311,36760782,36769426,36780061 Gene ID= ENSG00000134775.15 TPM= 3.32 Transcript Type= NA chr18 36297714 36780055 36297714 36780055 + ENST00000257209.8@FHOD3 ENST00000257209.8 protein_coding 36297714,36355539,36372680,36501932,36512438,36576451,36594787,36602674,36611952,36625511,36658075,36681436,36687128,36693209,36709095,36717832,36730646,36740656,36742737,36744032,36746945,36755119,36760608,36769265,36779448 36298000,36355645,36372744,36501999,36512543,36576545,36594898,36602768,36612095,36625749,36658188,36681570,36687178,36693423,36709391,36718715,36730804,36740838,36742856,36744193,36747135,36755311,36760782,36769426,36780055 Gene ID= ENSG00000134775.15 TPM= 5.13 Transcript Type= protein_coding chr18 36786788 36829002 36786788 36829002 - transcript685.chr18.nic@TPGS2 transcript685.chr18.nic protein_coding 36828683,36818894,36807847,36805374,36800198,36798449,36786788 36829002,36818973,36807934,36805502,36800311,36798609,36786982 Gene ID= ENSG00000134779.14 TPM= 4.53 Transcript Type= NA chr18 36794106 36829195 36794106 36829195 - ENST00000334295.8@TPGS2 ENST00000334295.8 protein_coding 36828683,36818894,36807847,36805374,36800198,36798449,36794106 36829195,36818973,36807934,36805502,36800311,36798609,36797050 Gene ID= ENSG00000134779.14 TPM= 91.46 Transcript Type= protein_coding chr18 36786573 36828842 36786573 36828842 - ENST00000590842.5@TPGS2 ENST00000590842.5 protein_coding 36828683,36818894,36807847,36805374,36800198,36798449,36786573 36828842,36818973,36807934,36805502,36800311,36798609,36787079 Gene ID= ENSG00000134779.14 TPM= 9.96 Transcript Type= protein_coding chr18 41955198 42082519 41955198 42082519 + transcript694.chr18.nnic@PIK3C3 transcript694.chr18.nnic protein_coding 41955198,41957570,41962489,41970327,41987812,41990459,41993270,41995890,41996638,42004356,42013442,42015476,42020638,42027443,42029325,42037692,42038781,42040677,42043733,42049531,42057883,42064740,42067388,42081123 41955359,41957758,41962632,41970456,41987898,41990554,41993341,41995994,41996730,42004541,42013596,42015566,42020705,42027548,42029441,42037820,42038850,42040741,42043817,42049605,42058051,42064830,42067513,42082519 Gene ID= ENSG00000078142.12 TPM= 2.72 Transcript Type= NA chr18 45666815 45683686 45666815 45683686 + transcript701.chr18.nic@SLC14A2 transcript701.chr18.nic protein_coding 45666815,45667833,45668349,45669306,45672900,45673683,45678975,45682319 45667094,45668022,45668477,45669498,45673047,45673817,45679024,45683686 Gene ID= ENSG00000132874.14 TPM= 3.62 Transcript Type= NA chr18 45829086 45844558 45829086 45844558 + transcript704.chr18.nic@SIGLEC15 transcript704.chr18.nic protein_coding 45829086,45837029,45837513,45838718,45840211,45842106 45829183,45837088,45837896,45839095,45840241,45844558 Gene ID= ENSG00000197046.11 TPM= 1.81 Transcript Type= NA chr18 45983537 46072280 45983537 46072280 - transcript707.chr18.nnic@PSTPIP2 transcript707.chr18.nnic protein_coding 46072156,46039947,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983537 46072280,46040047,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450 Gene ID= ENSG00000152229.18 TPM= 2.72 Transcript Type= NA chr18 45983536 46072260 45983536 46072260 - ENST00000409746.5@PSTPIP2 ENST00000409746.5 protein_coding 46072156,46039947,46024609,46015903,46011181,46005469,45999436,45998794,45997749,45993605,45992106,45991902,45990722,45988702,45983536 46072260,46040047,46024686,46015937,46011287,46005531,45999534,45998839,45997828,45993703,45992202,45991983,45990756,45988759,45985450 Gene ID= ENSG00000152229.18 TPM= 10.87 Transcript Type= protein_coding chr18 46080248 46098353 46080248 46098353 - ENST00000398752.10@ATP5A1 ENST00000398752.10 protein_coding 46098172,46095053,46091682,46089823,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46080248 46098353,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363 Gene ID= ENSG00000152234.15 TPM= 1496.41 Transcript Type= protein_coding chr18 46084150 46098296 46084150 46098296 - ENST00000590665.5@ATP5A1 ENST00000590665.5 protein_coding 46098172,46095053,46091682,46089889,46089566,46088109,46087341,46087008,46086387,46086113,46084504,46084150 46098296,46095131,46091851,46089996,46089732,46088257,46087492,46087232,46086494,46086257,46084654,46084363 Gene ID= ENSG00000152234.15 TPM= 7.7 Transcript Type= protein_coding chr18 46104332 46128333 46104332 46128333 + ENST00000282058.10@HAUS1 ENST00000282058.10 protein_coding 46104332,46105194,46118181,46119926,46122467,46123299,46124822,46125744,46128075 46104441,46105368,46118316,46120060,46122590,46123364,46124893,46125791,46128333 Gene ID= ENSG00000152240.12 TPM= 15.39 Transcript Type= protein_coding chr18 46174027 46266991 46174027 46266991 + ENST00000615052.4@C18orf25 ENST00000615052.4 protein_coding 46174027,46215811,46240005,46253697,46262929 46174330,46216595,46240187,46253823,46266991 Gene ID= ENSG00000152242.10 TPM= 4.07 Transcript Type= protein_coding chr18 46174034 46266983 46174034 46266983 + ENST00000619301.4@C18orf25 ENST00000619301.4 protein_coding 46174034,46215811,46253697,46262929 46174330,46216595,46253823,46266983 Gene ID= ENSG00000152242.10 TPM= 17.66 Transcript Type= protein_coding chr18 46679122 46757465 46679122 46757465 - transcript727.chr18.nnic@ST8SIA5 transcript727.chr18.nnic protein_coding 46756378,46730206,46721362,46704572,46692169,46688775,46686174,46681972,46679122 46757465,46730361,46721469,46704664,46692255,46688919,46686286,46682064,46680510 Gene ID= ENSG00000101638.13 TPM= 7.24 Transcript Type= NA chr18 46815713 46917503 46815713 46917503 - transcript747.chr18.nic@PIAS2 transcript747.chr18.nic protein_coding 46917322,46903527,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827959,46820933,46815713 46917503,46903635,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130,46821072,46818447 Gene ID= ENSG00000078043.15 TPM= 5.43 Transcript Type= NA chr18 46827758 46917474 46827758 46917474 - ENST00000590127.5@PIAS2 ENST00000590127.5 protein_coding 46917322,46890580,46864164,46855565,46855345,46846707,46844734,46844054,46836357,46829734,46827758 46917474,46891054,46864248,46855615,46855435,46846841,46844839,46844127,46836517,46829867,46828130 Gene ID= ENSG00000078043.15 TPM= 1.81 Transcript Type= retained_intron chr18 47107403 47150520 47107403 47150520 - ENST00000300605.10@HDHD2 ENST00000300605.10 protein_coding 47150378,47136339,47134496,47130244,47115132,47112977,47107403 47150520,47136449,47134704,47130328,47115348,47113040,47108785 Gene ID= ENSG00000167220.11 TPM= 126.48 Transcript Type= protein_coding chr18 47107408 47150500 47107408 47150500 - ENST00000588183.5@HDHD2 ENST00000588183.5 protein_coding 47150378,47136302,47134496,47130244,47115132,47112977,47107408 47150500,47136449,47134704,47130328,47115348,47113040,47108785 Gene ID= ENSG00000167220.11 TPM= 44.07 Transcript Type= nonsense_mediated_decay chr18 47838067 47930585 47838067 47930585 - transcript770.chr18.nic@SMAD2 transcript770.chr18.nic protein_coding 47930361,47920072,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47838067 47930585,47920169,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950 Gene ID= ENSG00000175387.15 TPM= 6.34 Transcript Type= NA chr18 47838067 47930871 47838067 47930871 - transcript771.chr18.nnic@SMAD2 transcript771.chr18.nnic protein_coding 47930800,47920072,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47838067 47930871,47920169,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950 Gene ID= ENSG00000175387.15 TPM= 5.43 Transcript Type= NA chr18 47838067 47931579 47838067 47931579 - transcript773.chr18.nic@SMAD2 transcript773.chr18.nic protein_coding 47930800,47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47845340,47838067 47931579,47930446,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484,47841950 Gene ID= ENSG00000175387.15 TPM= 25.36 Transcript Type= NA chr18 47844185 47930893 47844185 47930893 - transcript779.chr18.nic@SMAD2 transcript779.chr18.nic protein_coding 47930800,47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47844185 47930893,47930446,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484 Gene ID= ENSG00000175387.15 TPM= 3.17 Transcript Type= NA chr18 47844185 47930659 47844185 47930659 - transcript781.chr18.nic@SMAD2 transcript781.chr18.nic protein_coding 47930361,47896521,47870475,47869243,47868323,47865059,47851274,47848475,47845663,47844185 47930659,47896809,47870564,47869436,47868457,47865133,47851327,47848687,47845800,47845484 Gene ID= ENSG00000175387.15 TPM= 2.26 Transcript Type= NA chr18 48539186 48863207 48539186 48863207 + transcript787.chr18.nic@CTIF transcript787.chr18.nic protein_coding 48539186,48539758,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344 48539312,48539831,48619745,48636685,48663825,48664551,48670744,48711695,48758405,48761689,48817376,48857641,48863207 Gene ID= ENSG00000134030.13 TPM= 7.62 Transcript Type= NA chr18 48539046 48863217 48539046 48863217 + ENST00000256413.7@CTIF ENST00000256413.7 protein_coding 48539046,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344 48539312,48619745,48636685,48663825,48664551,48670744,48711695,48758405,48761689,48817376,48857641,48863217 Gene ID= ENSG00000134030.13 TPM= 8.53 Transcript Type= protein_coding chr18 48540000 48863207 48540000 48863207 + transcript791.chr18.nic@CTIF transcript791.chr18.nic protein_coding 48540000,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344 48540337,48619745,48636685,48663825,48664551,48670744,48711695,48758405,48761689,48817376,48857641,48863207 Gene ID= ENSG00000134030.13 TPM= 7.62 Transcript Type= NA chr18 48539158 48861906 48539158 48861906 + ENST00000382998.8@CTIF ENST00000382998.8 protein_coding 48539158,48539758,48619538,48636614,48663752,48664447,48670669,48711619,48757919,48761390,48817221,48857588,48859344 48539312,48539831,48619745,48636685,48663825,48664551,48670744,48711695,48758411,48761689,48817376,48857641,48861906 Gene ID= ENSG00000134030.13 TPM= 4.3 Transcript Type= protein_coding chr18 49043804 49460732 49043804 49460732 - transcript809.chr18.nnic@DYM transcript809.chr18.nnic protein_coding 49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49093217,49043804 49460732,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49093334,49044204 Gene ID= ENSG00000141627.13 TPM= 6.34 Transcript Type= NA chr18 49041474 49460802 49041474 49460802 - ENST00000269445.10@DYM ENST00000269445.10 protein_coding 49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49118744,49097402,49041474 49460802,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49118926,49097515,49044204 Gene ID= ENSG00000141627.13 TPM= 68.37 Transcript Type= protein_coding chr18 49041474 49460732 49041474 49460732 - transcript815.chr18.nnic@DYM transcript815.chr18.nnic protein_coding 49460398,49430255,49391593,49379665,49378567,49363161,49333728,49331864,49286434,49281997,49272178,49258380,49257010,49163685,49097402,49041474 49460732,49430447,49391645,49379758,49378700,49363233,49333853,49332006,49286616,49282175,49272303,49258493,49257104,49163787,49097515,49044204 Gene ID= ENSG00000141627.13 TPM= 3.17 Transcript Type= NA chr18 49481660 49487231 49481660 49487231 - ENST00000318240.7@C18orf32 ENST00000318240.7 protein_coding 49487043,49483584,49481660 49487231,49483771,49482410 Gene ID= ENSG00000177576.11 TPM= 71.09 Transcript Type= protein_coding chr18 49488453 49492482 49488453 49492482 - ENST00000618619.4@RPL17 ENST00000618619.4 protein_coding 49492458,49491746,49491532,49491405,49490793,49490454,49489359,49488453 49492482,49491833,49491584,49491445,49490927,49490552,49489550,49488566 Gene ID= ENSG00000265681.7 TPM= 4.35 Transcript Type= protein_coding chr18 49488477 49492483 49488477 49492483 - transcript824.chr18.nic@RPL17 transcript824.chr18.nic protein_coding 49492458,49491532,49491405,49490793,49490454,49489359,49488477 49492483,49491833,49491445,49490927,49490552,49489550,49488566 Gene ID= ENSG00000265681.7 TPM= 18.84 Transcript Type= NA chr18 49488484 49492523 49488484 49492523 - ENST00000580261.5@RPL17 ENST00000580261.5 protein_coding 49492458,49491532,49491405,49490793,49490454,49489359,49488484 49492523,49491584,49491445,49490927,49490552,49489550,49488566 Gene ID= ENSG00000265681.7 TPM= 422.71 Transcript Type= protein_coding chr18 49488484 49491840 49488484 49491840 - ENST00000579408.5@RPL17 ENST00000579408.5 protein_coding 49491532,49491405,49490793,49490454,49489359,49488484 49491840,49491445,49490927,49490552,49489550,49488566 Gene ID= ENSG00000265681.7 TPM= 31.51 Transcript Type= protein_coding chr18 49488484 49492444 49488484 49492444 - ENST00000579248.5@RPL17 ENST00000579248.5 protein_coding 49492258,49491532,49491405,49490793,49490454,49489359,49488484 49492444,49491584,49491445,49490927,49490552,49489550,49488566 Gene ID= ENSG00000265681.7 TPM= 23.36 Transcript Type= protein_coding chr18 49782167 49813960 49782167 49813960 - ENST00000285093.14@ACAA2 ENST00000285093.14 protein_coding 49813469,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49782167 49813960,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931 Gene ID= ENSG00000167315.17 TPM= 172.51 Transcript Type= protein_coding chr18 49783503 49813935 49783503 49813935 - transcript832.chr18.nic@ACAA2 transcript832.chr18.nic protein_coding 49813732,49802687,49797466,49795765,49794280,49792152,49791470,49787291,49785197,49783503 49813935,49802853,49797594,49795881,49794427,49792327,49791599,49787361,49785351,49783931 Gene ID= ENSG00000167315.17 TPM= 8.6 Transcript Type= NA chr18 50227193 50266522 50227193 50266522 - ENST00000398545.4@CFAP53 ENST00000398545.4 protein_coding 50266336,50261990,50261064,50251481,50250758,50242900,50238603,50227193 50266522,50262219,50261237,50251784,50250976,50243116,50238705,50227609 Gene ID= ENSG00000172361.5 TPM= 1.81 Transcript Type= protein_coding chr18 50268843 50281777 50268843 50281777 - transcript833.chr18.nic@MBD1 transcript833.chr18.nic protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271469,50268843 50281777,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273426,50272955,50272738,50271540,50269818 Gene ID= ENSG00000141644.17 TPM= 8.15 Transcript Type= NA chr18 50268847 50281774 50268847 50281774 - ENST00000269468.9@MBD1 ENST00000269468.9 protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50271469,50268847 50281774,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50271540,50269818 Gene ID= ENSG00000141644.17 TPM= 28.07 Transcript Type= protein_coding chr18 50266743 50281507 50266743 50281507 - transcript840.chr18.nic@MBD1 transcript840.chr18.nic protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50266743 50281507,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50267663 Gene ID= ENSG00000141644.17 TPM= 3.62 Transcript Type= NA chr18 50268847 50281774 50268847 50281774 - ENST00000347968.7@MBD1 ENST00000347968.7 protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50271469,50268847 50281774,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50271540,50269818 Gene ID= ENSG00000141644.17 TPM= 2.72 Transcript Type= protein_coding chr18 50268845 50281777 50268845 50281777 - transcript855.chr18.nic@MBD1 transcript855.chr18.nic protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50273564,50273334,50272824,50272677,50268845 50281777,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50273863,50273471,50272955,50272738,50269818 Gene ID= ENSG00000141644.17 TPM= 2.72 Transcript Type= NA chr18 50268847 50281482 50268847 50281482 - transcript856.chr18.nic@MBD1 transcript856.chr18.nic protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50268847 50281482,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273426,50272955,50272738 Gene ID= ENSG00000141644.17 TPM= 3.62 Transcript Type= NA chr18 50268847 50281777 50268847 50281777 - transcript858.chr18.nic@MBD1 transcript858.chr18.nic protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50268847 50281777,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738 Gene ID= ENSG00000141644.17 TPM= 3.62 Transcript Type= NA chr18 50269031 50281684 50269031 50281684 - ENST00000590208.5@MBD1 ENST00000590208.5 protein_coding 50281363,50279883,50277090,50276832,50276662,50276378,50275835,50275600,50275129,50274977,50274186,50273564,50273334,50272824,50272677,50269031 50281684,50280017,50277204,50276998,50276744,50276418,50275981,50275728,50275245,50275045,50274353,50273863,50273471,50272955,50272738,50269818 Gene ID= ENSG00000141644.17 TPM= 9.06 Transcript Type= protein_coding chr18 50282345 50288337 50282345 50288337 - transcript882.chr18.nic@CXXC1 transcript882.chr18.nic protein_coding 50287587,50286740,50286539,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282345 50288337,50286858,50286639,50286257,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739 Gene ID= ENSG00000154832.14 TPM= 5.98 Transcript Type= NA chr18 50282343 50288304 50282343 50288304 - ENST00000285106.10@CXXC1 ENST00000285106.10 protein_coding 50287587,50286740,50286539,50286022,50285749,50285325,50285002,50284732,50284378,50283894,50283705,50283515,50283265,50282854,50282343 50288304,50286858,50286639,50286257,50285928,50285351,50285247,50284839,50284562,50284101,50283815,50283564,50283361,50283006,50282739 Gene ID= ENSG00000154832.14 TPM= 83.85 Transcript Type= protein_coding chr18 50374995 50394173 50374995 50394173 + ENST00000285116.7@SKA1 ENST00000285116.7 protein_coding 50374995,50375820,50380126,50382129,50385216,50391124,50392099 50375194,50375918,50380250,50382226,50385353,50391293,50394173 Gene ID= ENSG00000154839.9 TPM= 2.72 Transcript Type= protein_coding chr18 50560078 50731824 50560078 50731824 + ENST00000400384.6@MAPK4 ENST00000400384.6 protein_coding 50560078,50663089,50715079,50721938,50725962,50729158 50560243,50664504,50715223,50722099,50726175,50731824 Gene ID= ENSG00000141639.11 TPM= 28.07 Transcript Type= protein_coding chr18 50879120 50947890 50879120 50947890 + ENST00000382927.3@ME2 ENST00000382927.3 protein_coding 50879120,50895809,50908063,50912801,50916168,50917347,50918110,50920456,50920661,50921074,50924098,50925756,50932258,50947017 50879308,50895928,50908196,50912950,50916243,50917508,50918213,50920565,50920758,50921187,50924212,50925898,50932360,50947890 Gene ID= ENSG00000082212.12 TPM= 4.53 Transcript Type= protein_coding chr18 50968016 50988121 50968016 50988121 + ENST00000269466.7@ELAC1 ENST00000269466.7 protein_coding 50968016,50974397,50984096,50986619 50968114,50974561,50984563,50988121 Gene ID= ENSG00000141642.8 TPM= 9.06 Transcript Type= protein_coding chr18 50968045 50969866 50968045 50969866 + ENST00000586966.2@ELAC1 ENST00000586966.2 protein_coding 50968045,50968432 50968114,50969866 Gene ID= ENSG00000141642.8 TPM= 1.81 Transcript Type= processed_transcript chr18 51030209 51079778 51030209 51079778 + transcript930.chr18.nic@SMAD4 transcript930.chr18.nic protein_coding 51030209,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51077307,51078256 51030623,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51077419,51079778 Gene ID= ENSG00000141646.13 TPM= 4.15 Transcript Type= NA chr18 51030213 51085039 51030213 51085039 + ENST00000342988.7@SMAD4 ENST00000342988.7 protein_coding 51030213,51046920,51048686,51049295,51054781,51058125,51058340,51059866,51065423,51067019,51076638,51078256 51030623,51047295,51048860,51049324,51054993,51058244,51058456,51059916,51065606,51067187,51076776,51085039 Gene ID= ENSG00000141646.13 TPM= 77.95 Transcript Type= protein_coding chr18 51030209 51080847 51030209 51080847 + transcript934.chr18.nnic@SMAD4 transcript934.chr18.nnic protein_coding 51030209,51046920,51048686,51049295,51054781,51059866,51065423,51067019,51076638,51078256 51030623,51047295,51048860,51049324,51054993,51059916,51065606,51067187,51076776,51080847 Gene ID= ENSG00000141646.13 TPM= 5.21 Transcript Type= NA chr18 54151601 54224788 54151601 54224788 - ENST00000256429.7@MBD2 ENST00000256429.7 protein_coding 54224018,54204998,54188874,54166076,54164523,54159765,54151601 54224788,54205157,54189011,54166166,54164700,54159903,54155311 Gene ID= ENSG00000134046.11 TPM= 104.14 Transcript Type= protein_coding chr18 54269404 54298234 54269404 54298234 + ENST00000579534.5@POLI ENST00000579534.5 protein_coding 54269404,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649 54269661,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54298234 Gene ID= ENSG00000101751.10 TPM= 19.92 Transcript Type= protein_coding chr18 54269560 54294729 54269560 54294729 + transcript951.chr18.nnic@POLI transcript951.chr18.nnic protein_coding 54269560,54271360,54273926,54277703,54280667,54282837,54283922,54287281,54291833,54293649 54269699,54271485,54274090,54277855,54280903,54283015,54284013,54287411,54292038,54294729 Gene ID= ENSG00000101751.10 TPM= 2.72 Transcript Type= NA chr18 55222334 55588629 55222334 55588629 - ENST00000356073.8@TCF4 ENST00000356073.8 protein_coding 55588038,55587045,55585280,55464076,55461019,55403454,55350874,55350359,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55232521,55228847,55228221,55222334 55588629,55587136,55585352,55464137,55461115,55403518,55351003,55350408,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671,55229076,55228361,55228030 Gene ID= ENSG00000196628.15 TPM= 12.68 Transcript Type= protein_coding chr18 55231745 55322363 55231745 55322363 - transcript966.chr18.nic@TCF4 transcript966.chr18.nic protein_coding 55321670,55279551,55275619,55269831,55261466,55259949,55257315,55254497,55234548,55231745 55322363,55279656,55275752,55269963,55261533,55260027,55257391,55254700,55234683,55232671 Gene ID= ENSG00000196628.15 TPM= 4.53 Transcript Type= NA chr18 56597208 56638645 56597208 56638645 - ENST00000217515.10@TXNL1 ENST00000217515.10 protein_coding 56638343,56626361,56624288,56618004,56616245,56614424,56610993,56597208 56638645,56626457,56624461,56618126,56616314,56614596,56611097,56603056 Gene ID= ENSG00000091164.12 TPM= 130.4 Transcript Type= protein_coding chr18 56651361 57029811 56651361 57029811 + ENST00000357574.7@WDR7 ENST00000357574.7 protein_coding 56651361,56672497,56679332,56681313,56682679,56685956,56686855,56691216,56691715,56694619,56694950,56696242,56717964,56731383,56756583,56758865,56779431,56781533,56816031,56879944,56923922,56935788,56938533,56939311,56962430,57020745,57027004 56651576,56672674,56679438,56681391,56682853,56686032,56686974,56691361,56691817,56694760,56695198,56696462,56718159,56731597,56757352,56758953,56779549,56781656,56816144,56880165,56924108,56935905,56938682,56939393,56962529,57020849,57029811 Gene ID= ENSG00000091157.13 TPM= 7.24 Transcript Type= protein_coding chr18 57548298 57586771 57548298 57586771 - transcript972.chr18.nnic@FECH transcript972.chr18.nnic protein_coding 57586666,57586554,57580073,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57548298 57586771,57586632,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846 Gene ID= ENSG00000066926.10 TPM= 9.06 Transcript Type= NA chr18 57548283 57586772 57548283 57586772 - ENST00000262093.9@FECH ENST00000262093.9 protein_coding 57586554,57580073,57573246,57571392,57566447,57562874,57559145,57554845,57554260,57551315,57548283 57586772,57580199,57573365,57571540,57566581,57562980,57559243,57554952,57554424,57551374,57550846 Gene ID= ENSG00000066926.10 TPM= 47.99 Transcript Type= protein_coding chr18 57600656 57622173 57600656 57622173 - ENST00000256854.9@NARS ENST00000256854.9 protein_coding 57621708,57620569,57615817,57615641,57613602,57611637,57609357,57607444,57607134,57606616,57605857,57602812,57602355,57600656 57622173,57620651,57615975,57615730,57613680,57611707,57609443,57607665,57607333,57606751,57605970,57602943,57602486,57601783 Gene ID= ENSG00000134440.11 TPM= 177.49 Transcript Type= protein_coding chr18 57630287 57738620 57630287 57738620 + transcript990.chr18.nnic@AC027097.1 transcript990.chr18.nnic antisense_RNA 57630287,57641559,57737762 57630518,57642052,57738620 Gene ID= ENSG00000267040.6 TPM= 2.72 Transcript Type= NA chr18 57646421 57803362 57646421 57803362 - transcript982.chr18.nnic@ATP8B1 transcript982.chr18.nnic protein_coding 57802998,57761825,57731627,57706490,57704555,57701215,57701039,57697795,57697618,57695450,57695171,57694582,57691807,57688299,57685072,57684036,57674834,57671468,57669318,57668429,57667092,57662483,57661174,57655194,57653992,57652484,57652034,57650367,57646421 57803362,57761939,57731829,57706587,57704668,57701313,57701100,57697867,57697688,57695532,57695329,57694670,57691997,57688507,57685115,57684192,57675022,57671580,57669482,57668540,57667167,57662615,57661462,57655417,57654075,57652729,57652172,57650497,57648712 Gene ID= ENSG00000081923.11 TPM= 4.23 Transcript Type= NA chr18 57646421 57803378 57646421 57803378 - transcript984.chr18.nnic@ATP8B1 transcript984.chr18.nnic protein_coding 57802998,57731627,57706490,57704555,57701215,57701039,57697795,57697618,57695450,57695171,57694582,57691807,57688299,57685072,57684036,57674834,57671468,57669318,57668429,57667092,57662483,57661174,57655194,57653992,57652484,57652034,57650367,57646421 57803378,57731832,57706587,57704668,57701313,57701100,57697867,57697688,57695532,57695329,57694670,57691997,57688507,57685115,57684192,57675022,57671580,57669482,57668540,57667167,57662615,57661462,57655417,57654075,57652729,57652172,57650497,57648712 Gene ID= ENSG00000081923.11 TPM= 7.85 Transcript Type= NA chr18 58044247 58398159 58044247 58398159 + transcript992.chr18.nnic@NEDD4L transcript992.chr18.nnic protein_coding 58044247,58045072,58165788,58245427,58248899,58252001,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58335478,58341038,58341678,58342906,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167 58044708,58045409,58165861,58245508,58248937,58252054,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58335537,58341169,58341797,58343103,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58398159 Gene ID= ENSG00000049759.17 TPM= 4.83 Transcript Type= NA chr18 58044362 58398159 58044362 58398159 + transcript1003.chr18.nnic@NEDD4L transcript1003.chr18.nnic protein_coding 58044362,58165788,58245427,58252001,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58335478,58341038,58341678,58342906,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167 58044708,58165861,58245508,58252054,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58335537,58341169,58341797,58343103,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58398159 Gene ID= ENSG00000049759.17 TPM= 4.83 Transcript Type= NA chr18 58045648 58398159 58045648 58398159 + transcript1004.chr18.nnic@NEDD4L transcript1004.chr18.nnic protein_coding 58045648,58165788,58245427,58248899,58252001,58315982,58322425,58323232,58324996,58328995,58330738,58333818,58341038,58341678,58342906,58349537,58350991,58357194,58364268,58365999,58367746,58370397,58373174,58383246,58385526,58387439,58389085,58390646,58391487,58396167 58045690,58165861,58245508,58248937,58252054,58316032,58322486,58323334,58325162,58329127,58330914,58333892,58341169,58341797,58343103,58349614,58351045,58357252,58364333,58366228,58367867,58370467,58373269,58383319,58385586,58387498,58389192,58390742,58391559,58398159 Gene ID= ENSG00000049759.17 TPM= 4.83 Transcript Type= NA chr18 58044387 58045477 58044387 58045477 + ENST00000617539.1@NEDD4L ENST00000617539.1 protein_coding 58044387,58045072 58044708,58045477 Gene ID= ENSG00000049759.17 TPM= 8.15 Transcript Type= protein_coding chr18 58671386 58754477 58671386 58754477 + ENST00000348428.7@MALT1 ENST00000348428.7 protein_coding 58671386,58681170,58696366,58700441,58709378,58709976,58710921,58714083,58715935,58723048,58733397,58734307,58735202,58741865,58744338,58745666,58747405 58671852,58681336,58696487,58700591,58709556,58710072,58710953,58714109,58715967,58723251,58733574,58734381,58735329,58742014,58744495,58745791,58754477 Gene ID= ENSG00000172175.12 TPM= 6.34 Transcript Type= protein_coding chr18 59139866 59157311 59139866 59157311 + ENST00000509791.7@SEC11C ENST00000509791.7 protein_coding 59139866,59149513,59152536,59155688 59140035,59149622,59152685,59157311 Gene ID= ENSG00000166562.8 TPM= 4.53 Transcript Type= protein_coding chr18 59139899 59158832 59139899 59158832 + ENST00000588875.2@SEC11C ENST00000588875.2 protein_coding 59139899,59149513,59152536,59155688,59158632 59140035,59149622,59152685,59155807,59158832 Gene ID= ENSG00000166562.8 TPM= 2.72 Transcript Type= protein_coding chr18 59327823 59359962 59327823 59359962 - ENST00000251047.5@LMAN1 ENST00000251047.5 protein_coding 59359031,59355504,59355313,59354519,59353202,59349113,59347513,59345919,59338760,59338557,59333091,59331418,59327823 59359962,59355658,59355420,59354580,59353301,59349236,59347571,59346051,59338953,59338627,59333244,59331539,59331129 Gene ID= ENSG00000074695.5 TPM= 109.12 Transcript Type= protein_coding chr18 59430939 59697714 59430939 59697714 - transcript1037.chr18.nnic@CCBE1 transcript1037.chr18.nnic protein_coding 59697577,59697212,59696629,59480186,59469473,59466739,59454851,59447983,59439677,59439543,59438111,59430939 59697714,59697469,59696709,59480238,59469607,59466891,59454951,59448103,59439816,59439578,59438146,59436141 Gene ID= ENSG00000183287.13 TPM= 8 Transcript Type= NA chr18 59430939 59697767 59430939 59697767 - transcript1038.chr18.nnic@CCBE1 transcript1038.chr18.nnic protein_coding 59697577,59697212,59696629,59480186,59469473,59466739,59454851,59447983,59439677,59439543,59438111,59430939 59697767,59697504,59696709,59480238,59469607,59466891,59454951,59448103,59439816,59439578,59438146,59436141 Gene ID= ENSG00000183287.13 TPM= 5.28 Transcript Type= NA chr18 59430940 59697380 59430940 59697380 - ENST00000439986.8@CCBE1 ENST00000439986.8 protein_coding 59697212,59696629,59480186,59469473,59466739,59454851,59447983,59439677,59439543,59438111,59430940 59697380,59696709,59480238,59469607,59466891,59454951,59448103,59439816,59439578,59438146,59436141 Gene ID= ENSG00000183287.13 TPM= 31.09 Transcript Type= protein_coding chr18 62041164 62187044 62041164 62187044 - ENST00000640252.1@PIGN ENST00000640252.1 protein_coding 62186844,62163531,62162253,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62041164 62187044,62163656,62162329,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979 Gene ID= ENSG00000197563.10 TPM= 2.94 Transcript Type= protein_coding chr18 62042852 62187056 62042852 62187056 - ENST00000640876.1@PIGN ENST00000640876.1 protein_coding 62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62042852 62187056,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979 Gene ID= ENSG00000197563.10 TPM= 11.09 Transcript Type= protein_coding chr18 62044233 62187038 62044233 62187038 - ENST00000357637.10@PIGN ENST00000357637.10 protein_coding 62186844,62162253,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62114561,62113134,62109834,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044233 62187038,62162329,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62114639,62113316,62109973,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979 Gene ID= ENSG00000197563.10 TPM= 2.04 Transcript Type= protein_coding chr18 62044242 62186998 62044242 62186998 - ENST00000638167.1@PIGN ENST00000638167.1 protein_coding 62186844,62161133,62157687,62157129,62154545,62148214,62146971,62145909,62143306,62140420,62138983,62138243,62106986,62106789,62105543,62102794,62101075,62095848,62090476,62088756,62085209,62084531,62082673,62074779,62072673,62044242 62186998,62161385,62157808,62157227,62154651,62148338,62147101,62146025,62143346,62140479,62139075,62138298,62107085,62106881,62105634,62102902,62101183,62095950,62090578,62088842,62085264,62084606,62082746,62074821,62072725,62045979 Gene ID= ENSG00000197563.10 TPM= 2.04 Transcript Type= protein_coding chr18 62187257 62307121 62187257 62307121 + transcript1063.chr18.nic@KIAA1468 transcript1063.chr18.nic protein_coding 62187257,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268869,62273980,62275374,62279774,62280646,62282306,62287351,62291543,62298790,62305414 62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62274086,62275473,62279856,62280709,62282444,62287467,62291631,62298860,62307121 Gene ID= ENSG00000134444.13 TPM= 21.73 Transcript Type= NA chr18 62187291 62275571 62187291 62275571 + ENST00000587725.5@KIAA1468 ENST00000587725.5 protein_coding 62187291,62211153,62221037,62221219,62221384,62227289,62227598,62228305,62231194,62232332,62244764,62252664,62255407,62257948,62258512,62261511,62263989,62264729,62266701,62268881,62273980,62275374 62188031,62211242,62221108,62221274,62221497,62227492,62227689,62228598,62231269,62232427,62244876,62252754,62255478,62258088,62258676,62261658,62264145,62264852,62266749,62268948,62274086,62275571 Gene ID= ENSG00000134444.13 TPM= 1.81 Transcript Type= non_stop_decay chr18 62325315 62391292 62325315 62391292 + ENST00000586569.2@TNFRSF11A ENST00000586569.2 protein_coding 62325315,62348168,62349812,62354391,62358248,62359955,62361680,62366708,62368701,62384751 62325427,62348249,62349937,62354534,62358341,62360049,62361793,62366760,62369484,62391292 Gene ID= ENSG00000141655.16 TPM= 2.72 Transcript Type= protein_coding chr18 62715450 62980433 62715450 62980433 + ENST00000262719.9@PHLPP1 ENST00000262719.9 protein_coding 62715450,62830035,62838784,62860435,62895011,62895781,62902964,62905224,62914913,62919959,62941718,62945109,62958629,62963368,62972514,62975397,62978262 62717259,62830231,62838909,62860601,62895157,62896011,62903166,62905284,62915008,62920114,62941918,62945271,62958759,62963472,62972708,62975625,62980433 Gene ID= ENSG00000081913.13 TPM= 29.88 Transcript Type= protein_coding chr18 63330739 63367548 63330739 63367548 - transcript1081.chr18.nnic@KDSR transcript1081.chr18.nnic protein_coding 63367011,63362779,63359736,63355498,63355204,63350888,63338800,63335257,63330739 63367548,63362868,63359792,63355563,63355299,63351079,63338883,63335358,63331901 Gene ID= ENSG00000119537.15 TPM= 5.43 Transcript Type= NA chr18 63327726 63367510 63327726 63367510 - ENST00000406396.7@KDSR ENST00000406396.7 protein_coding 63367011,63362779,63359736,63355498,63355204,63350888,63344410,63338800,63335257,63327726 63367510,63362868,63359792,63355563,63355299,63351079,63344493,63338883,63335358,63331901 Gene ID= ENSG00000119537.15 TPM= 106.85 Transcript Type= protein_coding chr18 63367328 63381629 63367328 63381629 + ENST00000589905.1@AC036176.1 ENST00000589905.1 antisense_RNA 63367328,63381377 63367859,63381629 Gene ID= ENSG00000267390.1 TPM= 2.72 Transcript Type= antisense_RNA chr18 63389197 63422453 63389197 63422453 - transcript1085.chr18.nnic@VPS4B transcript1085.chr18.nnic protein_coding 63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63392120,63389197 63422453,63411578,63410446,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63392186,63391076 Gene ID= ENSG00000119541.9 TPM= 1.81 Transcript Type= NA chr18 63389304 63422459 63389304 63422459 - transcript1086.chr18.nnic@VPS4B transcript1086.chr18.nnic protein_coding 63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63389304 63422459,63411578,63410435,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63391076 Gene ID= ENSG00000119541.9 TPM= 1.81 Transcript Type= NA chr18 63389190 63422463 63389190 63422463 - ENST00000238497.9@VPS4B ENST00000238497.9 protein_coding 63422233,63411467,63410290,63407432,63403707,63400547,63400048,63399242,63397034,63393409,63389190 63422463,63411578,63410446,63407499,63403826,63400703,63400196,63399323,63397253,63393549,63391076 Gene ID= ENSG00000119541.9 TPM= 67.92 Transcript Type= protein_coding chr18 63970029 63989371 63970029 63989371 + ENST00000353706.6@SERPINB8 ENST00000353706.6 protein_coding 63970029,63978299,63979801,63981721,63983579,63985093,63986874 63970187,63978476,63979938,63981838,63983721,63985245,63989371 Gene ID= ENSG00000166401.14 TPM= 3.62 Transcript Type= protein_coding chr18 63969925 63989374 63969925 63989374 + ENST00000397985.6@SERPINB8 ENST00000397985.6 protein_coding 63969925,63978299,63979801,63981721,63983579,63985093,63986874 63970170,63978476,63979938,63981838,63983721,63985245,63989374 Gene ID= ENSG00000166401.14 TPM= 7.24 Transcript Type= protein_coding chr18 63970029 63989371 63970029 63989371 + ENST00000542677.5@SERPINB8 ENST00000542677.5 protein_coding 63970029,63979801,63981721,63983579,63985093,63986874 63970170,63979938,63981838,63983721,63985245,63989371 Gene ID= ENSG00000166401.14 TPM= 1.81 Transcript Type= protein_coding chr18 67506582 67516980 67506582 67516980 - ENST00000310045.7@DSEL ENST00000310045.7 protein_coding 67516361,67506582 67516980,67515492 Gene ID= ENSG00000171451.13 TPM= 2.72 Transcript Type= protein_coding chr18 68673690 68715074 68673690 68715074 - transcript1095.chr18.nnic@TMX3 transcript1095.chr18.nnic protein_coding 68714936,68713846,68711364,68710021,68701745,68700405,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68678798,68673690 68715074,68713900,68711403,68710144,68701790,68700485,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68678896,68677193 Gene ID= ENSG00000166479.9 TPM= 3.17 Transcript Type= NA chr18 68673688 68715298 68673688 68715298 - ENST00000299608.6@TMX3 ENST00000299608.6 protein_coding 68714936,68713846,68711364,68710021,68701745,68700405,68697932,68697226,68691295,68687667,68684428,68684190,68682925,68680981,68679463,68673688 68715298,68713900,68711403,68710144,68701790,68700485,68698031,68697303,68691361,68687765,68684485,68684243,68682981,68681110,68679531,68677193 Gene ID= ENSG00000166479.9 TPM= 24 Transcript Type= protein_coding chr18 68715209 68718130 68715209 68718130 + ENST00000582077.5@CCDC102B ENST00000582077.5 protein_coding 68715209,68716528,68718004 68715611,68716594,68718130 Gene ID= ENSG00000150636.17 TPM= 1.81 Transcript Type= processed_transcript chr18 68798080 69055189 68798080 69055189 + ENST00000360242.9@CCDC102B ENST00000360242.9 protein_coding 68798080,68836749,68838706,68846313,68874669,68897219,69010934,69054030 68798181,68837369,68838926,68846421,68874785,68897428,69011104,69055189 Gene ID= ENSG00000150636.17 TPM= 4.53 Transcript Type= protein_coding chr18 70065634 70205699 70065634 70205699 - transcript1104.chr18.nic@RTTN transcript1104.chr18.nic protein_coding 70205628,70205128,70204086,70201894,70199414,70197624,70196501,70193288,70190538,70188108,70176675,70168855,70166919,70166062,70150608,70149971,70148901,70145612,70142288,70140100,70139599,70135184,70134473,70128358,70127502,70121556,70114445,70109498,70092676,70092110,70087989,70086613,70075352,70073906,70065634 70205699,70205315,70204263,70201983,70199504,70197738,70196648,70193453,70190719,70188223,70176845,70169067,70167031,70166188,70150733,70150087,70149037,70145783,70142387,70140188,70139716,70135280,70134541,70128546,70127741,70121700,70114599,70109717,70092804,70092220,70088147,70086684,70075541,70073994,70065922 Gene ID= ENSG00000176225.13 TPM= 2.72 Transcript Type= NA chr18 70288901 70330200 70288901 70330200 + ENST00000397942.3@SOCS6 ENST00000397942.3 protein_coding 70288901,70324543 70289090,70330200 Gene ID= ENSG00000170677.5 TPM= 17.21 Transcript Type= protein_coding chr18 74073366 74147865 74073366 74147865 - ENST00000419743.6@FBXO15 ENST00000419743.6 protein_coding 74147670,74140202,74135762,74130416,74129405,74125975,74124489,74123368,74081927,74073366 74147865,74140312,74135866,74130658,74129614,74126101,74124571,74123510,74082051,74073730 Gene ID= ENSG00000141665.11 TPM= 2.72 Transcript Type= protein_coding chr18 74148511 74160530 74148511 74160530 + ENST00000169551.10@TIMM21 ENST00000169551.10 protein_coding 74148511,74155145,74155306,74158014,74158171,74158376 74149109,74155207,74155403,74158087,74158276,74160530 Gene ID= ENSG00000075336.11 TPM= 14.49 Transcript Type= protein_coding chr18 74148515 74158785 74148515 74158785 + transcript1113.chr18.nic@TIMM21 transcript1113.chr18.nic protein_coding 74148515,74155145,74155306,74158014,74158171 74149109,74155207,74155403,74158087,74158785 Gene ID= ENSG00000075336.11 TPM= 2.72 Transcript Type= NA chr18 74250847 74292016 74250847 74292016 - ENST00000340533.8@CYB5A ENST00000340533.8 protein_coding 74291747,74263349,74260915,74255741,74250847 74292016,74263477,74260944,74255775,74253665 Gene ID= ENSG00000166347.18 TPM= 84.22 Transcript Type= protein_coding chr18 74496208 74523454 74496208 74523454 + ENST00000324262.8@CNDP2 ENST00000324262.8 protein_coding 74496208,74499882,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999 74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74523454 Gene ID= ENSG00000133313.14 TPM= 153.34 Transcript Type= protein_coding chr18 74496307 74521131 74496307 74521131 + ENST00000579847.5@CNDP2 ENST00000579847.5 protein_coding 74496307,74499937,74501329,74505849,74508840,74510813,74512448,74513559,74516228,74518499,74518949,74519999 74496431,74500033,74501472,74506011,74508928,74511013,74512532,74513719,74516392,74518640,74519096,74521131 Gene ID= ENSG00000133313.14 TPM= 44.67 Transcript Type= protein_coding chr18 74591774 74597824 74591774 74597824 - ENST00000580048.1@LINC00909 ENST00000580048.1 lincRNA 74596428,74591774 74597824,74593839 Gene ID= ENSG00000264247.1 TPM= 5.43 Transcript Type= lincRNA chr18 74597848 75065672 74597848 75065672 + transcript1129.chr18.nic@ZNF407 transcript1129.chr18.nic protein_coding 74597848,74630967,74641008,74781428,74877197,74881036,74889918,74920514,75063150 74597937,74635706,74641122,74781502,74877363,74881119,74890038,74920692,75065672 Gene ID= ENSG00000215421.9 TPM= 1.81 Transcript Type= NA chr18 76358191 76491513 76358191 76491513 - transcript1138.chr18.nnic@ZNF516 transcript1138.chr18.nnic protein_coding 76491447,76441245,76378855,76371467,76370528,76358191 76491513,76443211,76380303,76371571,76370595,76362557 Gene ID= ENSG00000101493.10 TPM= 8.6 Transcript Type= NA chr18 76358191 76495514 76358191 76495514 - transcript1141.chr18.nnic@ZNF516 transcript1141.chr18.nnic protein_coding 76495144,76441245,76378855,76371467,76370528,76358191 76495514,76443211,76380303,76371571,76370595,76362557 Gene ID= ENSG00000101493.10 TPM= 14.04 Transcript Type= NA chr18 76495521 76498088 76495521 76498088 + ENST00000622985.1@C18orf65 ENST00000622985.1 lincRNA 76495521,76496279 76495786,76498088 Gene ID= ENSG00000275763.3 TPM= 2.72 Transcript Type= lincRNA chr18 76528655 76559826 76528655 76559826 + ENST00000578613.5@LINC00908 ENST00000578613.5 lincRNA 76528655,76530384,76557975 76528963,76530464,76559826 Gene ID= ENSG00000263812.5 TPM= 3.62 Transcript Type= lincRNA chr18 76978834 77132818 76978834 77132818 - ENST00000355994.6@MBP ENST00000355994.6 protein_coding 77132580,77105211,77066298,77016832,76989956,76988877,76988495,76984775,76978834 77132818,77105286,77066385,77017268,76990060,76988912,76988527,76984894,76980471 Gene ID= ENSG00000197971.14 TPM= 2.72 Transcript Type= protein_coding chr18 77012779 77132769 77012779 77132769 - ENST00000397860.7@MBP ENST00000397860.7 protein_coding 77132580,77105211,77066298,77012779 77132769,77105286,77066385,77017268 Gene ID= ENSG00000197971.14 TPM= 5.43 Transcript Type= protein_coding chr18 79069407 79378298 79069407 79378298 + transcript1169.chr18.nnic@ATP9B transcript1169.chr18.nnic protein_coding 79069407,79096476,79110355,79113241,79126267,79143802,79154504,79193183,79204748,79206937,79213962,79253381,79277054,79303604,79306986,79329141,79330012,79336628,79337279,79342268,79344265,79345428,79345775,79347770,79348132,79359354,79372825,79373898,79377247 79069529,79096649,79110505,79113354,79126375,79143860,79154555,79193263,79204874,79207012,79214038,79253541,79277196,79303716,79307234,79329302,79330104,79336711,79337449,79342366,79344354,79345572,79345839,79347925,79348196,79359462,79372882,79374101,79378298 Gene ID= ENSG00000166377.19 TPM= 8.6 Transcript Type= NA chr18 79069270 79378298 79069270 79378298 + transcript1174.chr18.nnic@ATP9B transcript1174.chr18.nnic protein_coding 79069270,79096476,79110355,79113241,79126267,79143802,79154504,79176813,79193183,79206937,79213962,79253381,79277054,79303604,79306986,79329141,79330012,79336628,79337279,79342268,79344265,79345428,79345775,79347770,79359354,79373898,79377247 79069529,79096649,79110505,79113354,79126375,79143860,79154555,79176907,79193263,79207012,79214038,79253541,79277196,79303716,79307234,79329302,79330104,79336711,79337449,79342366,79344354,79345572,79345839,79347925,79359462,79374101,79378298 Gene ID= ENSG00000166377.19 TPM= 2.26 Transcript Type= NA chr18 79069394 79378283 79069394 79378283 + ENST00000426216.6@ATP9B ENST00000426216.6 protein_coding 79069394,79096476,79110355,79113241,79126267,79143802,79154504,79176813,79193183,79206937,79213962,79253381,79277054,79303604,79306986,79329141,79330012,79336628,79337279,79342268,79344265,79345428,79345775,79347770,79348132,79359354,79372825,79373898,79375394,79377247 79069529,79096649,79110505,79113354,79126375,79143860,79154555,79176907,79193263,79207012,79214038,79253541,79277196,79303716,79307234,79329302,79330104,79336711,79337449,79342366,79344354,79345572,79345839,79347925,79348196,79359462,79372882,79374101,79375426,79378283 Gene ID= ENSG00000166377.19 TPM= 6.34 Transcript Type= protein_coding chr18 79395856 79529325 79395856 79529325 + ENST00000253506.9@NFATC1 ENST00000253506.9 protein_coding 79395856,79410403,79433579,79448782,79450954,79451676,79461311,79467450,79486248,79527528 79396351,79411501,79433738,79448984,79451126,79451816,79461366,79467582,79486630,79529325 Gene ID= ENSG00000131196.17 TPM= 3.17 Transcript Type= protein_coding chr18 79395930 79470014 79395930 79470014 + ENST00000591814.5@NFATC1 ENST00000591814.5 protein_coding 79395930,79410403,79433579,79448782,79450954,79451676,79461311,79467450 79396351,79411501,79433738,79448984,79451126,79451816,79461366,79470014 Gene ID= ENSG00000131196.17 TPM= 3.62 Transcript Type= protein_coding chr18 79400322 79529323 79400322 79529323 + ENST00000318065.9@NFATC1 ENST00000318065.9 protein_coding 79400322,79410403,79433579,79448782,79450954,79451676,79461311,79467450,79486248,79527528 79400479,79411501,79433738,79448984,79451126,79451816,79461366,79467582,79486630,79529323 Gene ID= ENSG00000131196.17 TPM= 16.75 Transcript Type= protein_coding chr18 79400333 79468001 79400333 79468001 + ENST00000592223.5@NFATC1 ENST00000592223.5 protein_coding 79400333,79410403,79433579,79448782,79450954,79451676,79461311,79467450 79400479,79411501,79433738,79448984,79451126,79451816,79461366,79468001 Gene ID= ENSG00000131196.17 TPM= 25.36 Transcript Type= protein_coding chr18 79400336 79529323 79400336 79529323 + ENST00000329101.8@NFATC1 ENST00000329101.8 protein_coding 79400336,79410403,79433579,79448782,79450954,79451676,79461311,79467450,79486248,79527528 79400479,79411501,79433738,79448984,79451126,79451816,79461366,79467582,79486937,79529323 Gene ID= ENSG00000131196.17 TPM= 15.39 Transcript Type= protein_coding chr18 79679846 79754503 79679846 79754503 + ENST00000075430.11@CTDP1 ENST00000075430.11 protein_coding 79679846,79695225,79695977,79697860,79704767,79710346,79712972,79714491,79717535,79717810,79736355,79753652 79680261,79695308,79696070,79697988,79704917,79710436,79713138,79715528,79717676,79718016,79736521,79754503 Gene ID= ENSG00000060069.16 TPM= 17.21 Transcript Type= protein_coding chr18 79797948 79900099 79797948 79900099 + transcript1194.chr18.nnic@KCNG2 transcript1194.chr18.nnic protein_coding 79797948,79856379,79863628,79899040 79798014,79856452,79864291,79900099 Gene ID= ENSG00000178342.4 TPM= 2.72 Transcript Type= NA chr18 79825901 79900099 79825901 79900099 + transcript1196.chr18.nnic@KCNG2 transcript1196.chr18.nnic protein_coding 79825901,79856379,79863628,79899040 79826829,79856452,79864291,79900099 Gene ID= ENSG00000178342.4 TPM= 2.72 Transcript Type= NA chr18 79797954 79900099 79797954 79900099 + transcript1197.chr18.nnic@KCNG2 transcript1197.chr18.nnic protein_coding 79797954,79863628,79899040 79798014,79864291,79900099 Gene ID= ENSG00000178342.4 TPM= 1.81 Transcript Type= NA chr18 79902421 79951664 79902421 79951664 - transcript1204.chr18.nic@PQLC1 transcript1204.chr18.nic protein_coding 79951581,79950724,79943329,79933969,79930228,79919184,79902421 79951664,79951025,79943462,79934022,79930311,79919400,79904183 Gene ID= ENSG00000122490.18 TPM= 6.85 Transcript Type= NA chr18 79902421 79952346 79902421 79952346 - transcript1211.chr18.nic@PQLC1 transcript1211.chr18.nic protein_coding 79951581,79950724,79949519,79943329,79919184,79902421 79952346,79951025,79949636,79943462,79919400,79904183 Gene ID= ENSG00000122490.18 TPM= 5.04 Transcript Type= NA chr18 79902423 79951657 79902423 79951657 - transcript1214.chr18.nnic@PQLC1 transcript1214.chr18.nnic protein_coding 79951581,79950724,79943329,79933969,79902423 79951657,79951025,79943462,79934022,79904183 Gene ID= ENSG00000122490.18 TPM= 4.14 Transcript Type= NA chr18 79902420 79951664 79902420 79951664 - ENST00000397778.6@PQLC1 ENST00000397778.6 protein_coding 79951581,79950724,79943329,79933969,79919184,79902420 79951664,79951025,79943462,79934022,79919400,79904183 Gene ID= ENSG00000122490.18 TPM= 55.75 Transcript Type= protein_coding chr18 79902420 79951638 79902420 79951638 - ENST00000357575.8@PQLC1 ENST00000357575.8 protein_coding 79951581,79950724,79943329,79919184,79902420 79951638,79951025,79943462,79919400,79904183 Gene ID= ENSG00000122490.18 TPM= 22.25 Transcript Type= protein_coding chr18 79964561 79970822 79964561 79970822 + ENST00000451882.2@HSBP1L1 ENST00000451882.2 protein_coding 79964561,79966612,79968089,79970440 79964786,79966678,79968183,79970822 Gene ID= ENSG00000226742.3 TPM= 45.28 Transcript Type= protein_coding chr18 79964577 79970820 79964577 79970820 + transcript1227.chr18.nic@HSBP1L1 transcript1227.chr18.nic protein_coding 79964577,79966612,79970440 79964786,79968183,79970820 Gene ID= ENSG00000226742.3 TPM= 6.34 Transcript Type= NA chr18 79973407 79988585 79973407 79988585 - transcript1223.chr18.nic@TXNL4A transcript1223.chr18.nic protein_coding 79988240,79986602,79977598,79973407 79988585,79986750,79977701,79973856 Gene ID= ENSG00000141759.14 TPM= 8.15 Transcript Type= NA chr18 79973406 79988561 79973406 79988561 - transcript1229.chr18.nnic@TXNL4A transcript1229.chr18.nnic protein_coding 79988264,79977598,79973406 79988561,79977701,79973856 Gene ID= ENSG00000141759.14 TPM= 2.72 Transcript Type= NA chr18 79970811 79988593 79970811 79988593 - ENST00000269601.9@TXNL4A ENST00000269601.9 protein_coding 79988240,79977598,79970811 79988593,79977701,79973856 Gene ID= ENSG00000141759.14 TPM= 98.7 Transcript Type= protein_coding chr18 79973407 79988541 79973407 79988541 - ENST00000588162.1@TXNL4A ENST00000588162.1 protein_coding 79988240,79973407 79988541,79973856 Gene ID= ENSG00000141759.14 TPM= 2.72 Transcript Type= protein_coding chr18 80109031 80140351 80109031 80140351 + ENST00000262198.8@ADNP2 ENST00000262198.8 protein_coding 80109031,80117530,80133103,80135612 80109472,80117650,80133192,80140351 Gene ID= ENSG00000101544.8 TPM= 6.34 Transcript Type= protein_coding chr19 65822 70945 65822 70945 - ENST00000632089.1@WASH5P ENST00000632089.1 transcribed_processed_pseudogene 70928,66346,65822 70945,66499,66047 Gene ID= ENSG00000282458.1 TPM= 1.81 Transcript Type= processed_transcript chr19 281040 291504 281040 291504 - ENST00000434325.6@PLPP2 ENST00000434325.6 protein_coding 291285,288020,287474,282752,282134,281040 291504,288171,287751,282809,282310,281537 Gene ID= ENSG00000141934.9 TPM= 20.83 Transcript Type= protein_coding chr19 305573 344835 305573 344835 - transcript4.chr19.nic@MIER2 transcript4.chr19.nic protein_coding 344774,336083,334400,330264,327864,327133,326507,325635,313492,312191,311845,308801,308577,307119,305573 344835,336173,334542,330380,327989,327256,326598,325704,313643,312272,311939,308925,308665,307536,306711 Gene ID= ENSG00000105556.11 TPM= 3.53 Transcript Type= NA chr19 305573 344835 305573 344835 - transcript12.chr19.nic@MIER2 transcript12.chr19.nic protein_coding 344774,336083,334400,327864,327133,326507,325635,313492,312191,311845,308822,308577,307119,305573 344835,336173,334542,327989,327256,326598,325704,313643,312272,311939,308925,308665,307536,306711 Gene ID= ENSG00000105556.11 TPM= 3.08 Transcript Type= NA chr19 305573 344803 305573 344803 - transcript14.chr19.nic@MIER2 transcript14.chr19.nic protein_coding 344774,334400,327864,327133,326507,325635,313492,312191,311845,308801,308577,307119,305573 344803,334542,327989,327256,326598,325704,313643,312272,311939,308925,308665,307536,306711 Gene ID= ENSG00000105556.11 TPM= 4.44 Transcript Type= NA chr19 305573 344835 305573 344835 - transcript16.chr19.nic@MIER2 transcript16.chr19.nic protein_coding 344774,336083,334400,327864,326507,325635,313492,312191,311845,308801,308577,307119,305573 344835,336173,334542,327989,327256,325704,313643,312272,311939,308925,308665,307536,306711 Gene ID= ENSG00000105556.11 TPM= 2.17 Transcript Type= NA chr19 405438 409170 405438 409170 - ENST00000332235.7@C2CD4C ENST00000332235.7 protein_coding 409006,405438 409170,408401 Gene ID= ENSG00000183186.7 TPM= 6.34 Transcript Type= protein_coding chr19 416593 461035 416593 461035 - transcript22.chr19.nnic@SHC2 transcript22.chr19.nnic protein_coding 460962,460529,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416593 461035,460819,440932,439030,438837,436683,436431,436291,434865,430747,425231,422456,419056,417322 Gene ID= ENSG00000129946.10 TPM= 2.94 Transcript Type= NA chr19 416331 461088 416331 461088 - transcript30.chr19.nic@SHC2 transcript30.chr19.nic protein_coding 460529,440862,438970,438718,436380,436165,434709,430684,425097,422146,418923,416331 461088,440932,439030,438837,436683,436291,434865,430747,425231,422456,419056,417322 Gene ID= ENSG00000129946.10 TPM= 21.05 Transcript Type= NA chr19 416583 460996 416583 460996 - ENST00000264554.10@SHC2 ENST00000264554.10 protein_coding 460529,440862,438970,438718,436630,436380,436165,434709,430684,425097,422146,418923,416583 460996,440932,439030,438837,436683,436431,436291,434865,430747,425231,422456,419056,417322 Gene ID= ENSG00000129946.10 TPM= 39.16 Transcript Type= protein_coding chr19 507497 519654 507497 519654 + ENST00000359315.6@TPGS1 ENST00000359315.6 protein_coding 507497,518889 507844,519654 Gene ID= ENSG00000141933.9 TPM= 88.74 Transcript Type= protein_coding chr19 531721 542091 531721 542091 + transcript43.chr19.nnic@CDC34 transcript43.chr19.nnic protein_coding 531721,532058,535837,536243,537013,541339 531938,532108,535923,536340,537147,542091 Gene ID= ENSG00000099804.8 TPM= 16.3 Transcript Type= NA chr19 531690 539046 531690 539046 + transcript44.chr19.nnic@CDC34 transcript44.chr19.nnic protein_coding 531690,535837,536243,537013,538678 532108,535923,536340,537147,539046 Gene ID= ENSG00000099804.8 TPM= 8.15 Transcript Type= NA chr19 571277 583493 571277 583493 + ENST00000545507.6@BSG ENST00000545507.6 protein_coding 571277,579500,580379,580646,581315,582306,582514,582750 571579,579656,580461,580782,581591,582330,582582,583493 Gene ID= ENSG00000172270.18 TPM= 53.5 Transcript Type= protein_coding chr19 572578 583493 572578 583493 + ENST00000353555.8@BSG ENST00000353555.8 protein_coding 572578,579500,580379,580646,581315,582306,582514,582750 572701,579656,580461,580782,581591,582330,582582,583493 Gene ID= ENSG00000172270.18 TPM= 1341.18 Transcript Type= protein_coding chr19 572565 583490 572565 583490 + ENST00000333511.7@BSG ENST00000333511.7 protein_coding 572565,577774,579500,580379,580646,581315,582306,582514,582750 572701,578121,579656,580461,580782,581591,582330,582582,583490 Gene ID= ENSG00000172270.18 TPM= 70.7 Transcript Type= protein_coding chr19 589893 617159 589893 617159 + ENST00000251287.2@HCN2 ENST00000251287.2 protein_coding 589893,603544,605061,607964,610259,613248,613852,615795 590577,603967,605222,608182,610405,613488,614016,617159 Gene ID= ENSG00000099822.2 TPM= 1.81 Transcript Type= protein_coding chr19 617221 633537 617221 633537 - transcript77.chr19.nnic@POLRMT transcript77.chr19.nnic protein_coding 633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617777,617570,617419,617221 633537,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617870,617655,617480,617323 Gene ID= ENSG00000099821.13 TPM= 11.77 Transcript Type= NA chr19 617224 633604 617224 633604 - ENST00000588649.6@POLRMT ENST00000588649.6 protein_coding 633425,632834,629540,625124,624719,623454,622821,622582,622149,621058,620365,619958,619586,619210,618997,618705,618488,617777,617570,617419,617224 633604,632938,630168,625254,624905,623603,622985,622752,622373,621846,620487,620080,619765,619296,619110,618760,618586,617849,617655,617480,617323 Gene ID= ENSG00000099821.13 TPM= 249.93 Transcript Type= protein_coding chr19 639895 644371 639895 644371 + ENST00000586042.6@FGF22 ENST00000586042.6 protein_coding 639895,643235,643433 640139,643338,644371 Gene ID= ENSG00000070388.11 TPM= 1.81 Transcript Type= protein_coding chr19 647527 663320 647527 663320 - transcript99.chr19.nnic@RNF126 transcript99.chr19.nnic protein_coding 663047,652826,652233,651611,650234,649679,648882,648372,647527 663320,652884,652296,651855,650296,649748,649052,648487,648277 Gene ID= ENSG00000070423.17 TPM= 4.53 Transcript Type= NA chr19 647527 663245 647527 663245 - transcript100.chr19.nic@RNF126 transcript100.chr19.nic protein_coding 663047,652826,652233,650234,649679,648882,648372,647527 663245,652884,652296,651855,649748,648975,648487,648277 Gene ID= ENSG00000070423.17 TPM= 5.73 Transcript Type= NA chr19 647526 663277 647526 663277 - ENST00000292363.9@RNF126 ENST00000292363.9 protein_coding 663047,652826,652233,651611,650234,649679,648882,648372,647526 663277,652884,652296,651855,650296,649748,648975,648487,648277 Gene ID= ENSG00000070423.17 TPM= 67.31 Transcript Type= protein_coding chr19 647526 663194 647526 663194 - ENST00000605891.5@RNF126 ENST00000605891.5 protein_coding 663047,652826,652233,651611,650234,649679,648882,648372,647526 663194,652884,652296,651915,650296,649748,648975,648487,648277 Gene ID= ENSG00000070423.17 TPM= 3.92 Transcript Type= nonsense_mediated_decay chr19 678526 683392 678526 683392 + transcript105.chr19.nic@FSTL3 transcript105.chr19.nic protein_coding 678526,681333,681650 680489,681560,683392 Gene ID= ENSG00000070404.9 TPM= 24.15 Transcript Type= NA chr19 680707 683392 680707 683392 + ENST00000592947.5@FSTL3 ENST00000592947.5 protein_coding 680707,681333,681650 680879,681560,683392 Gene ID= ENSG00000070404.9 TPM= 15.1 Transcript Type= protein_coding chr19 676365 683399 676365 683399 + ENST00000166139.8@FSTL3 ENST00000166139.8 protein_coding 676365,677792,680274,681333,681650 676526,677977,680489,681560,683399 Gene ID= ENSG00000070404.9 TPM= 131.01 Transcript Type= protein_coding chr19 719256 748329 719256 748329 + transcript109.chr19.nic@PALM transcript109.chr19.nic protein_coding 719256,726138,727008,727564,731095,734173,736019,740352,746285 719657,726189,727088,727694,731245,734194,736078,740483,748329 Gene ID= ENSG00000099864.17 TPM= 11.32 Transcript Type= NA chr19 719256 735015 719256 735015 + transcript112.chr19.nic@PALM transcript112.chr19.nic protein_coding 719256,726138,727008,727564,731095,734173 719657,726189,727088,727694,731245,735015 Gene ID= ENSG00000099864.17 TPM= 3.62 Transcript Type= NA chr19 708939 748329 708939 748329 + ENST00000264560.11@PALM ENST00000264560.11 protein_coding 708939,726138,727008,727564,731095,734173,736019,746285 709151,726189,727088,727694,731245,734194,736078,748329 Gene ID= ENSG00000099864.17 TPM= 4.53 Transcript Type= protein_coding chr19 709101 748329 709101 748329 + ENST00000338448.9@PALM ENST00000338448.9 protein_coding 709101,726138,727008,727564,731095,734173,736019,740352,746285 709151,726189,727088,727694,731245,734194,736078,740483,748329 Gene ID= ENSG00000099864.17 TPM= 10.41 Transcript Type= protein_coding chr19 797075 812327 797075 812327 + ENST00000356948.10@PTBP1 ENST00000356948.10 protein_coding 797075,799413,803561,804036,804292,804532,804829,805013,805492,806408,807869,808360,808546,810543,810694 797505,799443,803636,804208,804438,804702,804939,805187,805569,806556,807902,808452,808762,810620,812327 Gene ID= ENSG00000011304.19 TPM= 174.8 Transcript Type= protein_coding chr19 797075 812327 797075 812327 + ENST00000635647.1@PTBP1 ENST00000635647.1 protein_coding 797075,799413,803561,804036,804292,804829,805013,805492,806408,807869,808360,808546,810543,810694 797505,799443,803636,804208,804702,804939,805187,805569,806556,807902,808452,808762,810620,812327 Gene ID= ENSG00000011304.19 TPM= 5.01 Transcript Type= protein_coding chr19 797383 812324 797383 812324 + transcript128.chr19.nic@PTBP1 transcript128.chr19.nic protein_coding 797383,799413,803561,804036,804292,804532,804829,805013,806408,808360,808546,810543,810694 797505,799443,803636,804208,804438,804702,804939,805187,806556,808452,808762,810620,812324 Gene ID= ENSG00000011304.19 TPM= 8.95 Transcript Type= NA chr19 797425 812312 797425 812312 + ENST00000349038.8@PTBP1 ENST00000349038.8 protein_coding 797425,799413,803561,804036,804292,804532,804829,805013,806408,807869,808360,808546,810543,810694 797505,799443,803636,804208,804438,804702,804939,805187,806556,807902,808452,808762,810620,812312 Gene ID= ENSG00000011304.19 TPM= 89.75 Transcript Type= protein_coding chr19 867630 893218 867630 893218 - ENST00000395808.7@MED16 ENST00000395808.7 protein_coding 893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,867630 893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499 Gene ID= ENSG00000175221.14 TPM= 219.44 Transcript Type= protein_coding chr19 867964 893218 867964 893218 - ENST00000325464.5@MED16 ENST00000325464.5 protein_coding 893086,890963,890137,889638,885770,884903,881559,879937,876974,875244,873449,871926,871037,868863,868416,867964 893218,891149,890244,889807,886201,885008,881714,880148,877180,875454,873582,872118,871253,868946,868499,868251 Gene ID= ENSG00000175221.14 TPM= 15.39 Transcript Type= protein_coding chr19 896504 913245 896504 913245 - ENST00000587975.2@R3HDM4 ENST00000587975.2 protein_coding 913087,901976,901422,900829,900061,899601,899440,896504 913245,902067,901546,900952,900146,899686,899495,897540 Gene ID= ENSG00000198858.9 TPM= 3.02 Transcript Type= protein_coding chr19 896503 913231 896503 913231 - ENST00000361574.9@R3HDM4 ENST00000361574.9 protein_coding 913087,901976,901422,900829,900061,899601,899440,896503 913231,902130,901546,900952,900146,899686,899495,897540 Gene ID= ENSG00000198858.9 TPM= 27.47 Transcript Type= protein_coding chr19 896503 913245 896503 913245 - ENST00000589428.5@R3HDM4 ENST00000589428.5 protein_coding 913087,901976,900829,900061,899601,899440,896503 913245,902130,900952,900146,899686,899495,897540 Gene ID= ENSG00000198858.9 TPM= 3.02 Transcript Type= nonsense_mediated_decay chr19 926041 972781 926041 972781 + transcript165.chr19.nnic@ARID3A transcript165.chr19.nnic protein_coding 926041,929262,932418,960092,964248,964833,966572,968405,971878 926197,929896,932742,960164,964431,965080,966868,968503,972781 Gene ID= ENSG00000116017.10 TPM= 4.07 Transcript Type= NA chr19 941254 972292 941254 972292 + transcript166.chr19.nnic@ARID3A transcript166.chr19.nnic protein_coding 941254,960092,964248,964833,966572,968405,971878 941539,960164,964431,965080,966868,968503,972292 Gene ID= ENSG00000116017.10 TPM= 2.26 Transcript Type= NA chr19 982945 994570 982945 994570 + transcript169.chr19.nnic@WDR18 transcript169.chr19.nnic protein_coding 982945,983162,983962,985865,989762,990223,990852,991081,991227,991955,994020,994213 983050,983250,984563,985975,989895,990364,990995,991145,991351,992121,994088,994570 Gene ID= ENSG00000065268.10 TPM= 91.46 Transcript Type= NA chr19 985159 991408 985159 991408 - transcript171.chr19.nnic@NA transcript171.chr19.nnic NA 991243,986588,985159 991408,986653,985966 Gene ID= novel_gene_chr19_172 TPM= 1.81 Transcript Type= NA chr19 1009644 1021181 1009644 1021181 - transcript182.chr19.nic@TMEM259 transcript182.chr19.nic protein_coding 1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009644 1021181,1014473,1013340,1012573,1012188,1011992,1011798,1011612,1011499,1011195,1010895 Gene ID= ENSG00000182087.12 TPM= 55.12 Transcript Type= NA chr19 1009648 1021179 1009648 1021179 - ENST00000356663.7@TMEM259 ENST00000356663.7 protein_coding 1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011367,1011096,1009648 1021179,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1011195,1010895 Gene ID= ENSG00000182087.12 TPM= 403.88 Transcript Type= protein_coding chr19 1009644 1021181 1009644 1021181 - transcript202.chr19.nic@TMEM259 transcript202.chr19.nic protein_coding 1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011367,1011096,1009644 1021181,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1011195,1010895 Gene ID= ENSG00000182087.12 TPM= 92.07 Transcript Type= NA chr19 1009644 1021181 1009644 1021181 - transcript210.chr19.nic@TMEM259 transcript210.chr19.nic protein_coding 1020772,1014192,1013241,1012463,1012066,1011892,1011741,1011580,1011096,1009644 1021181,1014473,1013340,1012573,1012188,1011992,1011798,1011663,1011499,1010895 Gene ID= ENSG00000182087.12 TPM= 37.37 Transcript Type= NA chr19 1009644 1021181 1009644 1021181 - transcript227.chr19.nic@TMEM259 transcript227.chr19.nic protein_coding 1020772,1014192,1013241,1012066,1011892,1011741,1011580,1011096,1009644 1021181,1014473,1013340,1012573,1011992,1011798,1011663,1011499,1010895 Gene ID= ENSG00000182087.12 TPM= 52.77 Transcript Type= NA chr19 1026610 1039068 1026610 1039068 + ENST00000348419.7@CNN2 ENST00000348419.7 protein_coding 1026610,1031071,1032392,1032559,1036416,1037625 1026724,1031192,1032458,1032696,1036562,1039068 Gene ID= ENSG00000064666.14 TPM= 9.96 Transcript Type= protein_coding chr19 1026581 1039068 1026581 1039068 + ENST00000263097.8@CNN2 ENST00000263097.8 protein_coding 1026581,1031071,1032392,1032559,1036130,1036416,1037625 1026724,1031192,1032458,1032696,1036246,1036562,1039068 Gene ID= ENSG00000064666.14 TPM= 46.18 Transcript Type= protein_coding chr19 1040103 1065569 1040103 1065569 + ENST00000263094.10@ABCA7 ENST00000263094.10 protein_coding 1040103,1041225,1041510,1041831,1042064,1042315,1042746,1043041,1043334,1043725,1044577,1045002,1046230,1046802,1047157,1047453,1048895,1049266,1050921,1051155,1051449,1051942,1052214,1053329,1053788,1054006,1054193,1054570,1054780,1055097,1055907,1056066,1056330,1056907,1057314,1057915,1058146,1058618,1058820,1059023,1061782,1062172,1063544,1063760,1064161,1064931,1065270 1040196,1041427,1041603,1041972,1042176,1042397,1042826,1043251,1043473,1043841,1044744,1045231,1046406,1047024,1047378,1047654,1049005,1049437,1051052,1051294,1051586,1052126,1052286,1053531,1053836,1054110,1054341,1054694,1054878,1055351,1055939,1056243,1056499,1057084,1057429,1058059,1058269,1058747,1058940,1059085,1061888,1062313,1063678,1063863,1064253,1065171,1065569 Gene ID= ENSG00000064687.12 TPM= 12.68 Transcript Type= protein_coding chr19 1067166 1086628 1067166 1086628 + ENST00000313093.6@ARHGAP45 ENST00000313093.6 protein_coding 1067166,1068414,1073149,1073506,1073674,1073948,1074104,1074343,1074614,1074799,1077857,1079703,1079928,1080255,1080464,1080682,1080892,1081550,1081824,1082840,1083143,1084238,1085660 1067495,1068744,1073292,1073590,1073746,1074014,1074241,1074407,1074724,1074879,1078045,1079840,1080118,1080379,1080547,1080786,1081064,1081738,1081961,1083066,1083353,1084346,1086628 Gene ID= ENSG00000180448.10 TPM= 56.14 Transcript Type= protein_coding chr19 1086579 1095357 1086579 1095357 - ENST00000615234.4@POLR2E ENST00000615234.4 protein_coding 1095259,1093904,1091792,1090908,1090087,1089884,1089472,1086579 1095357,1094078,1091907,1090988,1090145,1089962,1089551,1088720 Gene ID= ENSG00000099817.11 TPM= 226.84 Transcript Type= protein_coding chr19 1088163 1095374 1088163 1095374 - ENST00000215587.11@POLR2E ENST00000215587.11 protein_coding 1095259,1093904,1091792,1090908,1090087,1089884,1089472,1088163 1095374,1094078,1091907,1090988,1090145,1089962,1089573,1088720 Gene ID= ENSG00000099817.11 TPM= 10.87 Transcript Type= nonsense_mediated_decay chr19 1103937 1106790 1103937 1106790 + ENST00000354171.12@GPX4 ENST00000354171.12 protein_coding 1103937,1105186,1105366,1105658,1106242,1106400,1106540 1104127,1105280,1105510,1105809,1106266,1106459,1106790 Gene ID= ENSG00000167468.16 TPM= 385.2 Transcript Type= protein_coding chr19 1104057 1106788 1104057 1106788 + transcript308.chr19.nic@GPX4 transcript308.chr19.nic protein_coding 1104057,1105186,1105366,1105658,1106242,1106400,1106540 1104929,1105280,1105510,1105809,1106266,1106459,1106788 Gene ID= ENSG00000167468.16 TPM= 21.99 Transcript Type= NA chr19 1104073 1106788 1104073 1106788 + ENST00000588919.5@GPX4 ENST00000588919.5 protein_coding 1104073,1105186,1105366,1105658,1106242,1106378,1106540 1104127,1105280,1105510,1105809,1106266,1106459,1106788 Gene ID= ENSG00000167468.16 TPM= 3.89 Transcript Type= protein_coding chr19 1104650 1106787 1104650 1106787 + ENST00000622390.4@GPX4 ENST00000622390.4 protein_coding 1104650,1105186,1105366,1105406,1105658,1106242,1106400,1106540 1104929,1105280,1105402,1105510,1105809,1106266,1106459,1106787 Gene ID= ENSG00000167468.16 TPM= 31.59 Transcript Type= protein_coding chr19 1107631 1155185 1107631 1155185 - transcript283.chr19.nic@SBNO2 transcript283.chr19.nic protein_coding 1155086,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107631 1155185,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704 Gene ID= ENSG00000064932.15 TPM= 12.52 Transcript Type= NA chr19 1107631 1169204 1107631 1169204 - transcript284.chr19.nic@SBNO2 transcript284.chr19.nic protein_coding 1168694,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107631 1169204,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704 Gene ID= ENSG00000064932.15 TPM= 18.86 Transcript Type= NA chr19 1107637 1132221 1107637 1132221 - ENST00000438103.6@SBNO2 ENST00000438103.6 protein_coding 1132090,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107637 1132221,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704 Gene ID= ENSG00000064932.15 TPM= 25.81 Transcript Type= protein_coding chr19 1107636 1174283 1107636 1174283 - ENST00000361757.7@SBNO2 ENST00000361757.7 protein_coding 1174172,1154184,1149369,1147309,1127604,1123942,1123534,1122894,1122658,1122468,1122139,1119906,1119516,1119011,1117323,1116829,1116021,1114231,1113535,1112818,1112402,1112189,1111996,1111506,1111019,1110745,1109683,1109506,1109292,1109135,1108779,1107636 1174283,1154402,1149442,1147420,1127765,1124022,1123639,1123045,1122791,1122558,1122282,1120023,1119621,1119164,1117499,1116926,1116103,1114422,1113704,1112949,1112537,1112301,1112067,1111614,1111093,1110888,1109777,1109598,1109423,1109211,1108969,1108704 Gene ID= ENSG00000064932.15 TPM= 35.16 Transcript Type= protein_coding chr19 1205711 1228101 1205711 1228101 + transcript317.chr19.nic@STK11 transcript317.chr19.nic protein_coding 1205711,1218417,1219324,1220373,1220581,1221213,1221949,1222985,1226454,1226603,1227593 1207203,1218500,1219413,1220505,1220717,1221340,1222006,1223172,1226600,1226663,1228101 Gene ID= ENSG00000118046.14 TPM= 257.47 Transcript Type= NA chr19 1228287 1237881 1228287 1237881 - transcript331.chr19.nic@CBARP transcript331.chr19.nic protein_coding 1237756,1235996,1235779,1235501,1235001,1234571,1234191,1233426,1231101,1228287 1237881,1236121,1235918,1235565,1235145,1234742,1234331,1233636,1231275,1230142 Gene ID= ENSG00000099625.12 TPM= 1.81 Transcript Type= NA chr19 1241746 1244825 1241746 1244825 + ENST00000395633.5@ATP5D ENST00000395633.5 protein_coding 1241746,1242456,1244097,1244315,1244737 1241991,1242609,1244185,1244440,1244825 Gene ID= ENSG00000099624.7 TPM= 309.7 Transcript Type= protein_coding chr19 1241750 1244826 1241750 1244826 + ENST00000215375.6@ATP5D ENST00000215375.6 protein_coding 1241750,1242456,1244097,1244315 1241991,1242609,1244185,1244826 Gene ID= ENSG00000099624.7 TPM= 65.2 Transcript Type= protein_coding chr19 1248553 1259140 1248553 1259140 + ENST00000300952.6@MIDN ENST00000300952.6 protein_coding 1248553,1249890,1251562,1251839,1254167,1254902,1255422,1256995 1248660,1250529,1251649,1251901,1254478,1255061,1255694,1259140 Gene ID= ENSG00000167470.12 TPM= 37.13 Transcript Type= protein_coding chr19 1266653 1273172 1266653 1273172 + ENST00000586472.5@CIRBP ENST00000586472.5 protein_coding 1266653,1270928,1271140,1271329,1271551,1271981,1272427 1266701,1271036,1271246,1271467,1271632,1272051,1273172 Gene ID= ENSG00000099622.13 TPM= 10.41 Transcript Type= protein_coding chr19 1269337 1273172 1269337 1273172 + ENST00000320936.9@CIRBP ENST00000320936.9 protein_coding 1269337,1270928,1271140,1271329,1271551,1271981,1272427 1269410,1271036,1271246,1271467,1271632,1272051,1273172 Gene ID= ENSG00000099622.13 TPM= 484.01 Transcript Type= protein_coding chr19 1269352 1274773 1269352 1274773 + ENST00000585914.5@CIRBP ENST00000585914.5 protein_coding 1269352,1270928,1271140,1271329,1271551,1271981,1273494,1274307,1274649 1269410,1271036,1271246,1271467,1271632,1272051,1273715,1274444,1274773 Gene ID= ENSG00000099622.13 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr19 1276021 1279244 1276021 1279244 + ENST00000469144.5@C19orf24 ENST00000469144.5 protein_coding 1276021,1277183,1278777 1276103,1277299,1279244 Gene ID= ENSG00000228300.13 TPM= 8.15 Transcript Type= protein_coding chr19 1354939 1378433 1354939 1378433 + transcript363.chr19.nic@MUM1 transcript363.chr19.nic protein_coding 1354939,1356324,1357009,1358394,1358588,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519 1355135,1356449,1357094,1358464,1358700,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378433 Gene ID= ENSG00000160953.15 TPM= 5.3 Transcript Type= NA chr19 1354939 1378433 1354939 1378433 + transcript365.chr19.nic@MUM1 transcript365.chr19.nic protein_coding 1354939,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519 1355135,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378433 Gene ID= ENSG00000160953.15 TPM= 16.16 Transcript Type= NA chr19 1354940 1378429 1354940 1378429 + transcript366.chr19.nnic@MUM1 transcript366.chr19.nnic protein_coding 1354940,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376145 1355020,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378429 Gene ID= ENSG00000160953.15 TPM= 3.26 Transcript Type= NA chr19 1354940 1378433 1354940 1378433 + transcript367.chr19.nic@MUM1 transcript367.chr19.nic protein_coding 1354940,1356324,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519 1355020,1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378433 Gene ID= ENSG00000160953.15 TPM= 36.99 Transcript Type= NA chr19 1356314 1378431 1356314 1378431 + ENST00000591806.5@MUM1 ENST00000591806.5 protein_coding 1356314,1357009,1358394,1360136,1362250,1364509,1366305,1367160,1369265,1369596,1370642,1373072,1376519 1356449,1357094,1358464,1361032,1362351,1364579,1366381,1367220,1369340,1369646,1371078,1373160,1378431 Gene ID= ENSG00000160953.15 TPM= 8.92 Transcript Type= protein_coding chr19 1383904 1395581 1383904 1395581 + ENST00000313408.11@NDUFS7 ENST00000313408.11 protein_coding 1383904,1387811,1388525,1388833,1390871,1391119,1393242 1383942,1387847,1388593,1388938,1391050,1391165,1395581 Gene ID= ENSG00000115286.19 TPM= 12.68 Transcript Type= protein_coding chr19 1383918 1395584 1383918 1395584 + ENST00000546172.7@NDUFS7 ENST00000546172.7 protein_coding 1383918,1386518,1387811,1388525,1388833,1390871,1391119,1393242,1395391 1383942,1386639,1387847,1388593,1388938,1391050,1391165,1393330,1395584 Gene ID= ENSG00000115286.19 TPM= 15.85 Transcript Type= nonsense_mediated_decay chr19 1397094 1401567 1397094 1401567 - transcript395.chr19.nic@GAMT transcript395.chr19.nic protein_coding 1401296,1399524,1399128,1397094 1401567,1399938,1399195,1399026 Gene ID= ENSG00000130005.12 TPM= 1.81 Transcript Type= NA chr19 1397811 1401570 1397811 1401570 - ENST00000447102.8@GAMT ENST00000447102.8 protein_coding 1401296,1399793,1399524,1399128,1397811 1401570,1399938,1399587,1399195,1399026 Gene ID= ENSG00000130005.12 TPM= 7.24 Transcript Type= protein_coding chr19 1407461 1435682 1407461 1435682 + transcript398.chr19.nic@DAZAP1 transcript398.chr19.nic protein_coding 1407461,1417500,1418204,1418666,1421148,1422348,1428842,1429967,1430222,1432514,1434737 1407802,1417540,1418370,1418731,1421258,1422396,1428995,1429996,1430362,1432690,1435682 Gene ID= ENSG00000071626.16 TPM= 5.89 Transcript Type= NA chr19 1407680 1435683 1407680 1435683 + ENST00000587079.5@DAZAP1 ENST00000587079.5 protein_coding 1407680,1417500,1418204,1418666,1421151,1422348,1425878,1428842,1429967,1430222,1432514,1434737 1407802,1417540,1418370,1418731,1421258,1422396,1425960,1428995,1429996,1430362,1432690,1435683 Gene ID= ENSG00000071626.16 TPM= 3.17 Transcript Type= protein_coding chr19 1438401 1440494 1438401 1440494 + ENST00000592623.5@RPS15 ENST00000592623.5 protein_coding 1438401,1440019,1440349 1438892,1440253,1440494 Gene ID= ENSG00000115268.9 TPM= 29.49 Transcript Type= protein_coding chr19 1438420 1440494 1438420 1440494 + ENST00000592700.2@RPS15 ENST00000592700.2 protein_coding 1438420,1438807,1440349 1438428,1440253,1440494 Gene ID= ENSG00000115268.9 TPM= 2.78 Transcript Type= retained_intron chr19 1438406 1440494 1438406 1440494 + ENST00000591804.6@RPS15 ENST00000591804.6 protein_coding 1438406,1438807,1439606,1440019,1440349 1438428,1438892,1439826,1440253,1440494 Gene ID= ENSG00000115268.9 TPM= 11.29 Transcript Type= protein_coding chr19 1438385 1440494 1438385 1440494 + ENST00000586686.6@RPS15 ENST00000586686.6 protein_coding 1438385,1438807,1439968,1440349 1438428,1438892,1440253,1440494 Gene ID= ENSG00000115268.9 TPM= 4.05 Transcript Type= protein_coding chr19 1438400 1440490 1438400 1440490 + ENST00000591032.1@RPS15 ENST00000591032.1 protein_coding 1438400,1438807,1439961,1440349 1438428,1438892,1440253,1440490 Gene ID= ENSG00000115268.9 TPM= 3.69 Transcript Type= protein_coding chr19 1438405 1440488 1438405 1440488 + ENST00000589656.6@RPS15 ENST00000589656.6 protein_coding 1438405,1438807,1440019,1440349 1438428,1438892,1440241,1440488 Gene ID= ENSG00000115268.9 TPM= 2.17 Transcript Type= protein_coding chr19 1438419 1440494 1438419 1440494 + ENST00000593052.5@RPS15 ENST00000593052.5 protein_coding 1438419,1438807,1440019,1440349 1438580,1438892,1440253,1440494 Gene ID= ENSG00000115268.9 TPM= 21.71 Transcript Type= protein_coding chr19 1474164 1479229 1474164 1479229 - transcript415.chr19.nic@C19orf25 transcript415.chr19.nic protein_coding 1479163,1478774,1474164 1479229,1478905,1475514 Gene ID= ENSG00000119559.15 TPM= 1.81 Transcript Type= NA chr19 1473948 1479556 1473948 1479556 - ENST00000585675.5@C19orf25 ENST00000585675.5 protein_coding 1479163,1478774,1473948 1479556,1478905,1475258 Gene ID= ENSG00000119559.15 TPM= 27.62 Transcript Type= protein_coding chr19 1473201 1479118 1473201 1479118 - ENST00000436106.3@C19orf25 ENST00000436106.3 protein_coding 1478774,1473201 1479118,1475258 Gene ID= ENSG00000119559.15 TPM= 3.62 Transcript Type= protein_coding chr19 1474186 1478916 1474186 1478916 - ENST00000588849.1@C19orf25 ENST00000588849.1 protein_coding 1478774,1474186 1478916,1475514 Gene ID= ENSG00000119559.15 TPM= 2.72 Transcript Type= protein_coding chr19 1474174 1479183 1474174 1479183 - ENST00000592872.5@C19orf25 ENST00000592872.5 protein_coding 1479114,1478774,1474174 1479183,1478905,1475258 Gene ID= ENSG00000119559.15 TPM= 8.6 Transcript Type= protein_coding chr19 1481429 1490332 1481429 1490332 - transcript420.chr19.nic@PCSK4 transcript420.chr19.nic protein_coding 1490158,1489793,1488188,1487964,1487785,1487603,1487141,1486853,1484027,1483838,1483650,1483284,1482896,1482402,1481429 1490332,1489897,1488280,1488092,1487861,1487691,1487313,1487065,1484127,1483941,1483767,1483463,1483020,1482475,1482207 Gene ID= ENSG00000115257.15 TPM= 1.81 Transcript Type= NA chr19 1490747 1497927 1490747 1497927 + ENST00000233596.7@REEP6 ENST00000233596.7 protein_coding 1490747,1495294,1495469,1496285,1497174 1491384,1495387,1495607,1496453,1497927 Gene ID= ENSG00000115255.10 TPM= 273.02 Transcript Type= protein_coding chr19 1491142 1497928 1491142 1497928 + transcript431.chr19.nnic@REEP6 transcript431.chr19.nnic protein_coding 1491142,1495294,1495469,1496317,1497174 1491384,1495387,1495607,1496453,1497928 Gene ID= ENSG00000115255.10 TPM= 20.37 Transcript Type= NA chr19 1573596 1592801 1573596 1592801 - ENST00000156825.5@MBD3 ENST00000156825.5 protein_coding 1592618,1585055,1584540,1582622,1581092,1578335,1573596 1592801,1585214,1584677,1582712,1581269,1578538,1578158 Gene ID= ENSG00000071655.17 TPM= 50.03 Transcript Type= protein_coding chr19 1576678 1592708 1576678 1592708 - ENST00000434436.7@MBD3 ENST00000434436.7 protein_coding 1592522,1585055,1584540,1582622,1581092,1578335,1576678 1592708,1585214,1584677,1582712,1581269,1578538,1578158 Gene ID= ENSG00000071655.17 TPM= 10.79 Transcript Type= protein_coding chr19 1597172 1605490 1597172 1605490 - ENST00000591899.7@UQCR11 ENST00000591899.7 protein_coding 1605360,1599412,1597172 1605490,1599560,1598215 Gene ID= ENSG00000127540.11 TPM= 342.3 Transcript Type= protein_coding chr19 1598049 1605443 1598049 1605443 - ENST00000593029.1@UQCR11 ENST00000593029.1 protein_coding 1605360,1602294,1599412,1598049 1605443,1602426,1599560,1598215 Gene ID= ENSG00000127540.11 TPM= 3.62 Transcript Type= processed_transcript chr19 1609292 1652639 1609292 1652639 - transcript454.chr19.nic@TCF3 transcript454.chr19.nic protein_coding 1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1612207,1611704,1609292 1652639,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1612433,1611849,1609599 Gene ID= ENSG00000071564.14 TPM= 1.81 Transcript Type= NA chr19 1609292 1652639 1609292 1652639 - transcript456.chr19.nic@TCF3 transcript456.chr19.nic protein_coding 1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1612207,1611704,1609292 1652639,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1612433,1611849,1610500 Gene ID= ENSG00000071564.14 TPM= 3.62 Transcript Type= NA chr19 1610972 1652639 1610972 1652639 - transcript458.chr19.nic@TCF3 transcript458.chr19.nic protein_coding 1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1612207,1611704,1610972 1652639,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1612433,1611849,1611369 Gene ID= ENSG00000071564.14 TPM= 5.43 Transcript Type= NA chr19 1611041 1652639 1611041 1652639 - transcript459.chr19.nic@TCF3 transcript459.chr19.nic protein_coding 1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1615285,1611704,1611041 1652639,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1615520,1611849,1611369 Gene ID= ENSG00000071564.14 TPM= 3.62 Transcript Type= NA chr19 1610972 1652639 1610972 1652639 - transcript465.chr19.nic@TCF3 transcript465.chr19.nic protein_coding 1652300,1650177,1646355,1632332,1632038,1627359,1625576,1623951,1622313,1622054,1621838,1621133,1620968,1619780,1619316,1619111,1615686,1612207,1610972 1652639,1650287,1646427,1632405,1632116,1627426,1625708,1624000,1622415,1622223,1621970,1621191,1621046,1619853,1619474,1619234,1615821,1612433,1611849 Gene ID= ENSG00000071564.14 TPM= 10.87 Transcript Type= NA chr19 1815246 1848463 1815246 1848463 - ENST00000170168.8@REXO1 ENST00000170168.8 protein_coding 1848202,1826878,1825839,1823572,1821519,1820264,1819934,1819018,1818706,1818482,1817707,1817219,1816698,1816431,1816225,1815246 1848463,1828631,1825943,1823785,1821682,1820395,1820057,1819131,1818843,1818595,1817780,1817329,1816813,1816569,1816345,1816154 Gene ID= ENSG00000079313.13 TPM= 38.03 Transcript Type= protein_coding chr19 1852399 1863568 1852399 1863568 - ENST00000250916.5@KLF16 ENST00000250916.5 protein_coding 1863041,1852399 1863568,1854760 Gene ID= ENSG00000129911.8 TPM= 21.73 Transcript Type= protein_coding chr19 1905381 1926026 1905381 1926026 + transcript488.chr19.nnic@SCAMP4 transcript488.chr19.nnic protein_coding 1905381,1914989,1917694,1918127,1918889,1923070,1924108 1905390,1915026,1917822,1918283,1918990,1923187,1926026 Gene ID= ENSG00000227500.9 TPM= 22.64 Transcript Type= NA chr19 1905378 1913447 1905378 1913447 + ENST00000329478.3@ADAT3 ENST00000329478.3 protein_coding 1905378,1911890 1905439,1913447 Gene ID= ENSG00000213638.5 TPM= 19.02 Transcript Type= protein_coding chr19 1941141 1982044 1941141 1982044 + transcript507.chr19.nic@CSNK1G2 transcript507.chr19.nic protein_coding 1941141,1969508,1978305,1978442,1978602,1978859,1979319,1979495,1979752,1979911,1980149 1941418,1969959,1978345,1978511,1978750,1979248,1979403,1979643,1979835,1980017,1982044 Gene ID= ENSG00000133275.15 TPM= 11.32 Transcript Type= NA chr19 1941149 1981338 1941149 1981338 + ENST00000255641.12@CSNK1G2 ENST00000255641.12 protein_coding 1941149,1969508,1978305,1978442,1978602,1978859,1979163,1979319,1979495,1979752,1979911,1980149 1941418,1969959,1978345,1978511,1978750,1979093,1979248,1979403,1979643,1979835,1980017,1981338 Gene ID= ENSG00000133275.15 TPM= 223.67 Transcript Type= protein_coding chr19 1985438 2015724 1985438 2015724 - ENST00000255608.8@BTBD2 ENST00000255608.8 protein_coding 2015297,1997344,1993020,1990717,1990004,1987500,1987166,1986830,1985438 2015724,1997463,1993176,1990822,1990201,1987692,1987253,1986976,1986649 Gene ID= ENSG00000133243.8 TPM= 199.67 Transcript Type= protein_coding chr19 2037470 2051248 2037470 2051248 - transcript530.chr19.nic@MKNK2 transcript530.chr19.nic protein_coding 2051096,2050801,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037470 2051248,2050947,2046691,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856 Gene ID= ENSG00000099875.14 TPM= 60.52 Transcript Type= NA chr19 2037465 2051248 2037465 2051248 - transcript534.chr19.nic@MKNK2 transcript534.chr19.nic protein_coding 2051096,2050801,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465 2051248,2050947,2046691,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829 Gene ID= ENSG00000099875.14 TPM= 39.84 Transcript Type= NA chr19 2037465 2042140 2037465 2042140 - ENST00000591142.5@MKNK2 ENST00000591142.5 protein_coding 2041840,2041040,2040134,2037465 2042140,2041204,2040177,2037829 Gene ID= ENSG00000099875.14 TPM= 20.83 Transcript Type= protein_coding chr19 2037482 2051244 2037482 2051244 - ENST00000250896.7@MKNK2 ENST00000250896.7 protein_coding 2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037482 2051244,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856 Gene ID= ENSG00000099875.14 TPM= 82.7 Transcript Type= protein_coding chr19 2037465 2050887 2037465 2050887 - ENST00000591601.5@MKNK2 ENST00000591601.5 protein_coding 2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465 2050887,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2039856 Gene ID= ENSG00000099875.14 TPM= 61.42 Transcript Type= protein_coding chr19 2037465 2051224 2037465 2051224 - ENST00000309340.11@MKNK2 ENST00000309340.11 protein_coding 2051096,2050801,2046604,2046367,2046186,2043503,2043124,2042766,2042607,2042427,2041840,2041040,2040134,2037465 2051224,2050947,2046691,2046468,2046283,2043582,2043197,2042870,2042662,2042522,2042034,2041204,2040177,2037829 Gene ID= ENSG00000099875.14 TPM= 95.08 Transcript Type= protein_coding chr19 2071010 2096538 2071010 2096538 - transcript543.chr19.nic@MOB3A transcript543.chr19.nic protein_coding 2096381,2085175,2078140,2076811,2071010 2096538,2085328,2078679,2077013,2073424 Gene ID= ENSG00000172081.13 TPM= 2.72 Transcript Type= NA chr19 2071010 2096311 2071010 2096311 - transcript545.chr19.nnic@MOB3A transcript545.chr19.nnic protein_coding 2096226,2078140,2076811,2071010 2096311,2078679,2077013,2073424 Gene ID= ENSG00000172081.13 TPM= 3.62 Transcript Type= NA chr19 2071038 2096332 2071038 2096332 - ENST00000357066.7@MOB3A ENST00000357066.7 protein_coding 2096226,2085175,2078140,2076811,2071038 2096332,2085328,2078679,2077013,2073424 Gene ID= ENSG00000172081.13 TPM= 122.25 Transcript Type= protein_coding chr19 2100982 2151633 2100982 2151633 - transcript548.chr19.nnic@AP3D1 transcript548.chr19.nnic protein_coding 2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100982 2151633,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112931,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268 Gene ID= ENSG00000065000.15 TPM= 34.41 Transcript Type= NA chr19 2100994 2151541 2100994 2151541 - ENST00000355272.10@AP3D1 ENST00000355272.10 protein_coding 2151239,2138619,2137727,2137011,2132471,2130408,2129318,2129090,2127152,2123830,2123358,2121734,2121163,2120862,2118601,2117222,2116605,2116207,2115538,2115219,2114748,2114125,2113336,2112860,2111679,2111285,2110707,2110136,2109873,2109086,2108687,2100994 2151541,2138714,2137807,2137091,2132578,2130537,2129457,2129163,2127201,2123879,2123406,2121879,2121311,2121092,2118832,2117367,2116746,2116278,2115613,2115418,2114821,2114302,2113413,2112967,2111828,2111332,2110896,2110224,2109958,2109207,2108766,2102268 Gene ID= ENSG00000065000.15 TPM= 30.79 Transcript Type= protein_coding chr19 2233149 2236348 2233149 2236348 - transcript558.chr19.nnic@PLEKHJ1 transcript558.chr19.nnic protein_coding 2236155,2235923,2235762,2234150,2233998,2233149 2236348,2235933,2235828,2234240,2234061,2233905 Gene ID= ENSG00000104886.11 TPM= 7.24 Transcript Type= NA chr19 2233153 2237704 2233153 2237704 - ENST00000589097.5@PLEKHJ1 ENST00000589097.5 protein_coding 2237295,2236155,2235923,2235762,2234150,2233998,2233153 2237704,2236952,2235990,2235828,2234240,2234061,2233905 Gene ID= ENSG00000104886.11 TPM= 103.68 Transcript Type= protein_coding chr19 2233150 2236306 2233150 2236306 - transcript569.chr19.nic@PLEKHJ1 transcript569.chr19.nic protein_coding 2236155,2235923,2234150,2233150 2236306,2235990,2235828,2234061 Gene ID= ENSG00000104886.11 TPM= 2.72 Transcript Type= NA chr19 2233156 2236320 2233156 2236320 - ENST00000326631.6@PLEKHJ1 ENST00000326631.6 protein_coding 2236155,2235923,2235762,2234150,2233998,2233156 2236320,2235990,2235828,2234240,2234061,2233905 Gene ID= ENSG00000104886.11 TPM= 34.86 Transcript Type= protein_coding chr19 2233153 2236294 2233153 2236294 - ENST00000591099.6@PLEKHJ1 ENST00000591099.6 protein_coding 2236155,2235923,2235762,2233998,2233153 2236294,2235990,2235828,2234061,2233905 Gene ID= ENSG00000104886.11 TPM= 2.72 Transcript Type= protein_coding chr19 2233149 2236326 2233149 2236326 - ENST00000587962.6@PLEKHJ1 ENST00000587962.6 protein_coding 2236155,2235923,2235762,2234150,2233149 2236326,2235990,2235828,2234240,2234061 Gene ID= ENSG00000104886.11 TPM= 6.34 Transcript Type= protein_coding chr19 2236856 2248678 2236856 2248678 + transcript556.chr19.nic@SF3A2 transcript556.chr19.nic protein_coding 2236856,2243382,2244544,2244733,2245446,2246882,2247594,2247767 2236901,2243544,2244615,2244779,2246802,2247022,2247662,2248678 Gene ID= ENSG00000104897.9 TPM= 2.72 Transcript Type= NA chr19 2236504 2248679 2236504 2248679 + ENST00000221494.9@SF3A2 ENST00000221494.9 protein_coding 2236504,2243382,2244544,2244733,2245446,2246753,2246882,2247594,2247767 2236901,2243544,2244615,2244779,2245555,2246802,2247022,2247662,2248679 Gene ID= ENSG00000104897.9 TPM= 38.03 Transcript Type= protein_coding chr19 2269509 2273488 2269509 2273488 + ENST00000590943.6@OAZ1 ENST00000590943.6 protein_coding 2269509,2271782,2272735,2272972 2269744,2271954,2272820,2273488 Gene ID= ENSG00000104904.12 TPM= 9.51 Transcript Type= nonsense_mediated_decay chr19 2321517 2328620 2321517 2328620 - ENST00000252622.14@LSM7 ENST00000252622.14 protein_coding 2328561,2328387,2324125,2321517 2328620,2328477,2324196,2321822 Gene ID= ENSG00000130332.14 TPM= 25.36 Transcript Type= protein_coding chr19 2321521 2328611 2321521 2328611 - ENST00000585409.2@LSM7 ENST00000585409.2 protein_coding 2328561,2328387,2324125,2321521 2328611,2328477,2324192,2321822 Gene ID= ENSG00000130332.14 TPM= 7.24 Transcript Type= protein_coding chr19 2321520 2328586 2321520 2328586 - ENST00000587502.2@LSM7 ENST00000587502.2 protein_coding 2328387,2324125,2321520 2328586,2324196,2321822 Gene ID= ENSG00000130332.14 TPM= 7.24 Transcript Type= protein_coding chr19 2328630 2354806 2328630 2354806 + ENST00000613503.4@SPPL2B ENST00000613503.4 protein_coding 2328630,2334602,2337443,2338752,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946 2328775,2334721,2337625,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351594,2354806 Gene ID= ENSG00000005206.16 TPM= 69.95 Transcript Type= protein_coding chr19 2328672 2354803 2328672 2354803 + transcript595.chr19.nic@SPPL2B transcript595.chr19.nic protein_coding 2328672,2334602,2337443,2338752,2339069,2339824,2340076,2340898,2343965,2344362,2344553,2345253,2351434,2352946 2328775,2334721,2337625,2338841,2339208,2339966,2340172,2343292,2344039,2344424,2344652,2345330,2351594,2354803 Gene ID= ENSG00000005206.16 TPM= 8.83 Transcript Type= NA chr19 2328614 2354803 2328614 2354803 + transcript597.chr19.nic@SPPL2B transcript597.chr19.nic protein_coding 2328614,2334602,2337443,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946 2328775,2334721,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351594,2354803 Gene ID= ENSG00000005206.16 TPM= 7.47 Transcript Type= NA chr19 2328693 2353933 2328693 2353933 + ENST00000610743.4@SPPL2B ENST00000610743.4 protein_coding 2328693,2334602,2337443,2338752,2339069,2339824,2340076,2340898,2343211,2343965,2344362,2344553,2345253,2351434,2352946 2328775,2334721,2337625,2338841,2339208,2339966,2340172,2341014,2343292,2344039,2344424,2344652,2345330,2351657,2353933 Gene ID= ENSG00000005206.16 TPM= 1.81 Transcript Type= protein_coding chr19 2328696 2342503 2328696 2342503 + ENST00000618220.4@SPPL2B ENST00000618220.4 protein_coding 2328696,2334602,2337443,2338752,2339069,2339824,2340076,2340898 2328775,2334721,2337625,2338841,2339208,2339966,2340172,2342503 Gene ID= ENSG00000005206.16 TPM= 1.81 Transcript Type= protein_coding chr19 2423468 2426261 2423468 2426261 + transcript609.chr19.nnic@TMPRSS9 transcript609.chr19.nnic protein_coding 2423468,2424089,2425002,2425357,2425927 2423565,2424257,2425267,2425493,2426261 Gene ID= ENSG00000178297.12 TPM= 6.79 Transcript Type= NA chr19 2423562 2426261 2423562 2426261 + transcript611.chr19.nic@TMPRSS9 transcript611.chr19.nic protein_coding 2423562,2425002,2425357,2425927 2424257,2425267,2425493,2426261 Gene ID= ENSG00000178297.12 TPM= 3.17 Transcript Type= NA chr19 2425624 2427894 2425624 2427894 - ENST00000215570.7@TIMM13 ENST00000215570.7 protein_coding 2427414,2427256,2425624 2427894,2427324,2427046 Gene ID= ENSG00000099800.7 TPM= 201.48 Transcript Type= protein_coding chr19 2426565 2427538 2426565 2427538 - ENST00000591871.1@TIMM13 ENST00000591871.1 protein_coding 2427459,2427256,2426565 2427538,2427324,2427046 Gene ID= ENSG00000099800.7 TPM= 4.98 Transcript Type= protein_coding chr19 2428166 2456996 2428166 2456996 - ENST00000325327.3@LMNB2 ENST00000325327.3 protein_coding 2456670,2444404,2438375,2438163,2435001,2434788,2434295,2433826,2432416,2431783,2431548,2428166 2456996,2444540,2438531,2438288,2435171,2434913,2434515,2434105,2432523,2431902,2431658,2430952 Gene ID= ENSG00000176619.12 TPM= 47.99 Transcript Type= protein_coding chr19 2476127 2478259 2476127 2478259 + transcript615.chr19.nic@GADD45B transcript615.chr19.nic protein_coding 2476127,2476529,2477488 2476402,2477251,2478259 Gene ID= ENSG00000099860.8 TPM= 1.81 Transcript Type= NA chr19 2476127 2478259 2476127 2478259 + ENST00000215631.8@GADD45B ENST00000215631.8 protein_coding 2476127,2476529,2477029,2477488 2476402,2476630,2477251,2478259 Gene ID= ENSG00000099860.8 TPM= 54.79 Transcript Type= protein_coding chr19 2476127 2478259 2476127 2478259 + ENST00000592937.1@GADD45B ENST00000592937.1 protein_coding 2476127,2476529 2476402,2478259 Gene ID= ENSG00000099860.8 TPM= 1.36 Transcript Type= retained_intron chr19 2511219 2702709 2511219 2702709 - ENST00000382159.7@GNG7 ENST00000382159.7 protein_coding 2702646,2646224,2555149,2520608,2511219 2702709,2646280,2555188,2520725,2515147 Gene ID= ENSG00000176533.12 TPM= 28.98 Transcript Type= protein_coding chr19 2714567 2721418 2714567 2721418 - ENST00000323469.4@DIRAS1 ENST00000323469.4 protein_coding 2721304,2714567 2721418,2717875 Gene ID= ENSG00000176490.4 TPM= 3.62 Transcript Type= protein_coding chr19 2732524 2740152 2732524 2740152 - ENST00000269740.8@SLC39A3 ENST00000269740.8 protein_coding 2739945,2737048,2732524 2740152,2737379,2733485 Gene ID= ENSG00000141873.10 TPM= 103.23 Transcript Type= protein_coding chr19 2734524 2740028 2734524 2740028 - ENST00000455372.2@SLC39A3 ENST00000455372.2 protein_coding 2739945,2734524 2740028,2737379 Gene ID= ENSG00000141873.10 TPM= 9.96 Transcript Type= protein_coding chr19 2754714 2783371 2754714 2783371 - ENST00000221566.6@SGTA ENST00000221566.6 protein_coding 2783233,2768969,2767580,2767136,2765186,2763653,2762506,2761460,2759257,2757693,2757337,2754714 2783371,2769091,2767686,2767220,2765285,2763757,2762644,2761522,2759294,2757782,2757457,2755933 Gene ID= ENSG00000104969.9 TPM= 146.7 Transcript Type= protein_coding chr19 2785460 2815807 2785460 2815807 + ENST00000307741.10@THOP1 ENST00000307741.10 protein_coding 2785460,2790421,2794764,2796081,2799689,2805016,2806917,2807442,2808243,2810304,2810640,2811598,2813115 2785678,2790633,2794912,2796188,2799791,2805176,2807052,2807808,2808444,2810490,2810768,2811734,2815807 Gene ID= ENSG00000172009.14 TPM= 53.43 Transcript Type= protein_coding chr19 2819864 2835768 2819864 2835768 + transcript646.chr19.nnic@ZNF554 transcript646.chr19.nnic protein_coding 2819864,2823040,2827617,2830340,2832303,2833681 2820124,2823112,2827743,2830475,2832494,2835768 Gene ID= ENSG00000172006.11 TPM= 2.72 Transcript Type= NA chr19 2819874 2835773 2819874 2835773 + ENST00000317243.9@ZNF554 ENST00000317243.9 protein_coding 2819874,2823040,2827617,2832303,2833681 2820124,2823112,2827743,2832494,2835773 Gene ID= ENSG00000172006.11 TPM= 11.77 Transcript Type= protein_coding chr19 2841435 2860484 2841435 2860484 + ENST00000334241.8@ZNF555 ENST00000334241.8 protein_coding 2841435,2850587,2851468,2852380 2841575,2850713,2851651,2860484 Gene ID= ENSG00000186300.11 TPM= 6.34 Transcript Type= protein_coding chr19 2900898 2918476 2900898 2918476 + ENST00000306908.9@ZNF57 ENST00000306908.9 protein_coding 2900898,2915522,2916078,2916924 2901048,2915648,2916249,2918476 Gene ID= ENSG00000171970.12 TPM= 3.62 Transcript Type= protein_coding chr19 2933218 2944933 2933218 2944933 - ENST00000314531.4@ZNF77 ENST00000314531.4 protein_coding 2944838,2939281,2936524,2933218 2944933,2939407,2936704,2934815 Gene ID= ENSG00000175691.8 TPM= 3.62 Transcript Type= protein_coding chr19 2977446 2995184 2977446 2995184 + ENST00000246112.8@TLE6 ENST00000246112.8 protein_coding 2977446,2978198,2980100,2981538,2982148,2986829,2986983,2987356,2987724,2987898,2988091,2989061,2989535,2991843,2993432,2994019,2994900 2977610,2978284,2980182,2981583,2982189,2986891,2987238,2987372,2987790,2987974,2988128,2989313,2989785,2991984,2993582,2994095,2995184 Gene ID= ENSG00000104953.19 TPM= 1.81 Transcript Type= protein_coding chr19 2997639 3029322 2997639 3029322 - transcript671.chr19.nnic@TLE2 transcript671.chr19.nnic protein_coding 3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009578,3008869,3006420,3005721,3005437,3002353,3000647,2997639 3029322,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955 Gene ID= ENSG00000065717.14 TPM= 6.96 Transcript Type= NA chr19 2997639 3029322 2997639 3029322 - transcript674.chr19.nic@TLE2 transcript674.chr19.nic protein_coding 3028881,3028706,3028319,3027829,3025020,3019699,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,2997639 3029322,3028803,3028382,3027873,3025082,3019773,3019466,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,2997955 Gene ID= ENSG00000065717.14 TPM= 4.79 Transcript Type= NA chr19 2997639 3029256 2997639 3029256 - transcript677.chr19.nnic@TLE2 transcript677.chr19.nnic protein_coding 3028881,3028706,3028319,3027829,3025020,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639 3029256,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009577,3008945,3006669,3005968,3005584,3002503,3000723,2997955 Gene ID= ENSG00000065717.14 TPM= 3.34 Transcript Type= NA chr19 2997639 3029322 2997639 3029322 - transcript678.chr19.nic@TLE2 transcript678.chr19.nic protein_coding 3028881,3028706,3028319,3027829,3025020,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639 3029322,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955 Gene ID= ENSG00000065717.14 TPM= 21.6 Transcript Type= NA chr19 2997639 3029225 2997639 3029225 - transcript682.chr19.nic@TLE2 transcript682.chr19.nic protein_coding 3028881,3028706,3028319,3027829,3025020,3019283,3017840,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,2997639 3029225,3028803,3028382,3027873,3025082,3019773,3017859,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,2997955 Gene ID= ENSG00000065717.14 TPM= 3.88 Transcript Type= NA chr19 2997639 3029322 2997639 3029322 - transcript683.chr19.nic@TLE2 transcript683.chr19.nic protein_coding 3028881,3028706,3028319,3027829,3025020,3019699,3015653,3014570,3013669,3011022,3009542,3008869,3006420,3005721,3005437,3002353,3000647,2997639 3029322,3028803,3028382,3027873,3025082,3019773,3015760,3014614,3013818,3011160,3009702,3008945,3006669,3005968,3005584,3002503,3000723,2997955 Gene ID= ENSG00000065717.14 TPM= 4.84 Transcript Type= NA chr19 3052909 3061898 3052909 3061898 - transcript688.chr19.nnic@AES transcript688.chr19.nnic protein_coding 3061644,3061160,3057679,3056312,3055664,3054120,3052909 3061898,3061257,3057742,3056356,3055726,3054194,3054040 Gene ID= ENSG00000104964.14 TPM= 61.88 Transcript Type= NA chr19 3052910 3063107 3052910 3063107 - ENST00000221561.12@AES ENST00000221561.12 protein_coding 3062700,3061160,3057679,3056312,3055664,3054120,3052910 3063107,3061257,3057742,3056356,3055726,3054194,3054040 Gene ID= ENSG00000104964.14 TPM= 60.97 Transcript Type= protein_coding chr19 3053162 3062557 3053162 3062557 - ENST00000327141.8@AES ENST00000327141.8 protein_coding 3062174,3061160,3057679,3056312,3055664,3054120,3053162 3062557,3061257,3057742,3056356,3055726,3054194,3054040 Gene ID= ENSG00000104964.14 TPM= 300.03 Transcript Type= protein_coding chr19 3094410 3124004 3094410 3124004 + ENST00000078429.8@GNA11 ENST00000078429.8 protein_coding 3094410,3110149,3113330,3114944,3118924,3119206,3120989 3094787,3110333,3113484,3115072,3119053,3119359,3124004 Gene ID= ENSG00000088256.8 TPM= 197.41 Transcript Type= protein_coding chr19 3185832 3209601 3185832 3209601 + transcript716.chr19.nic@NCLN transcript716.chr19.nic protein_coding 3185832,3192470,3193284,3196183,3198817,3201523,3203756,3204005,3204573,3205939,3206152,3206265,3207198,3207391,3207629 3186214,3192660,3193428,3196277,3198897,3201626,3203844,3204144,3204751,3206026,3206190,3206425,3207251,3207469,3209601 Gene ID= ENSG00000125912.10 TPM= 129.79 Transcript Type= NA chr19 3189969 3209601 3189969 3209601 + transcript718.chr19.nnic@NCLN transcript718.chr19.nnic protein_coding 3189969,3192470,3193284,3196183,3198817,3201523,3203756,3204005,3204573,3205939,3206152,3206262,3207198,3207391,3207629 3190131,3192660,3193428,3196277,3198897,3201626,3203844,3204144,3204751,3206026,3206190,3206425,3207251,3207469,3209601 Gene ID= ENSG00000125912.10 TPM= 18.41 Transcript Type= NA chr19 3366583 3463654 3366583 3463654 + transcript725.chr19.nnic@NFIC transcript725.chr19.nnic protein_coding 3366583,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3453763,3462752 3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3453916,3463654 Gene ID= ENSG00000141905.18 TPM= 2.72 Transcript Type= NA chr19 3366549 3462967 3366549 3462967 + ENST00000341919.7@NFIC ENST00000341919.7 protein_coding 3366549,3381712,3425106,3433518,3434277,3435083,3449014,3452482,3462752 3366666,3382243,3425177,3433592,3434400,3435207,3449139,3452666,3462967 Gene ID= ENSG00000141905.18 TPM= 2.72 Transcript Type= protein_coding chr19 3490822 3500940 3490822 3500940 - ENST00000427575.5@DOHH ENST00000427575.5 protein_coding 3500561,3496541,3494028,3492262,3490822 3500940,3496886,3494104,3492499,3491811 Gene ID= ENSG00000129932.8 TPM= 65.2 Transcript Type= protein_coding chr19 3506240 3536762 3506240 3536762 + transcript748.chr19.nic@FZR1 transcript748.chr19.nic protein_coding 3506240,3522956,3525868,3526120,3526259,3526980,3527631,3530792,3531714,3531911,3533294,3534421,3534795 3506474,3523058,3525993,3526183,3526386,3527062,3527814,3530857,3531816,3532650,3533398,3534513,3536762 Gene ID= ENSG00000105325.13 TPM= 3.62 Transcript Type= NA chr19 3525461 3535723 3525461 3535723 + transcript750.chr19.nic@FZR1 transcript750.chr19.nic protein_coding 3525461,3526120,3526259,3526980,3527631,3530792,3531714,3531911,3532417,3533294,3534421,3534795 3525993,3526183,3526386,3527062,3527814,3530857,3531816,3532095,3532650,3533398,3534513,3535723 Gene ID= ENSG00000105325.13 TPM= 8.15 Transcript Type= NA chr19 3506273 3538330 3506273 3538330 + ENST00000441788.6@FZR1 ENST00000441788.6 protein_coding 3506273,3522956,3525868,3526120,3526259,3526980,3527631,3530792,3531714,3531911,3532417,3533294,3534421,3534795 3506474,3523058,3525993,3526183,3526386,3527062,3527814,3530857,3531816,3532095,3532650,3533398,3534513,3538330 Gene ID= ENSG00000105325.13 TPM= 129.49 Transcript Type= protein_coding chr19 3538301 3557621 3538301 3557621 - transcript755.chr19.nic@MFSD12 transcript755.chr19.nic protein_coding 3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3538301 3557621,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3538756 Gene ID= ENSG00000161091.12 TPM= 9.96 Transcript Type= NA chr19 3544199 3557573 3544199 3557573 - ENST00000355415.6@MFSD12 ENST00000355415.6 protein_coding 3557106,3550984,3548123,3547848,3547455,3547272,3546255,3546074,3544809,3544199 3557573,3551194,3548267,3548030,3547547,3547364,3546425,3546168,3544939,3544732 Gene ID= ENSG00000161091.12 TPM= 85.12 Transcript Type= protein_coding chr19 3572938 3579088 3572938 3579088 + ENST00000333651.10@HMG20B ENST00000333651.10 protein_coding 3572938,3573292,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509 3572994,3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088 Gene ID= ENSG00000064961.18 TPM= 112.7 Transcript Type= protein_coding chr19 3572915 3579088 3572915 3579088 + transcript763.chr19.nic@HMG20B transcript763.chr19.nic protein_coding 3572915,3573292,3573692,3575540,3576261,3576553,3576892,3577981,3578509 3572994,3573347,3574586,3575660,3576307,3576625,3577107,3578113,3579088 Gene ID= ENSG00000064961.18 TPM= 8.1 Transcript Type= NA chr19 3572958 3579088 3572958 3579088 + transcript764.chr19.nic@HMG20B transcript764.chr19.nic protein_coding 3572958,3573692,3574383,3575540,3576261,3576553,3576892,3577981,3578509 3573347,3573800,3574586,3575660,3576307,3576625,3577107,3578113,3579088 Gene ID= ENSG00000064961.18 TPM= 31.2 Transcript Type= NA chr19 3572979 3579088 3572979 3579088 + ENST00000488973.6@HMG20B ENST00000488973.6 protein_coding 3572979,3573692,3575540,3576261,3576553,3576892,3577981,3578509 3573347,3574586,3575660,3576307,3576625,3577107,3578113,3579088 Gene ID= ENSG00000064961.18 TPM= 7.43 Transcript Type= retained_intron chr19 3585553 3593541 3585553 3593541 + ENST00000322315.5@GIPC3 ENST00000322315.5 protein_coding 3585553,3586495,3586814,3589443,3589831,3590039 3585822,3586680,3586994,3589555,3589912,3593541 Gene ID= ENSG00000179855.5 TPM= 2.72 Transcript Type= protein_coding chr19 3594514 3606894 3594514 3606894 - transcript771.chr19.nnic@TBXA2R transcript771.chr19.nnic protein_coding 3606530,3602615,3599849,3594514 3606894,3602732,3600717,3595933 Gene ID= ENSG00000006638.11 TPM= 2.72 Transcript Type= NA chr19 3594506 3606840 3594506 3606840 - ENST00000375190.8@TBXA2R ENST00000375190.8 protein_coding 3606530,3599849,3594506 3606840,3600717,3595933 Gene ID= ENSG00000006638.11 TPM= 21.73 Transcript Type= protein_coding chr19 3606952 3616692 3606952 3616692 + transcript789.chr19.nic@CACTIN-AS1 transcript789.chr19.nic antisense_RNA 3606952,3611200,3611766 3607409,3611265,3616692 Gene ID= ENSG00000226800.5 TPM= 2.72 Transcript Type= NA chr19 3610641 3626815 3610641 3626815 - ENST00000429344.6@CACTIN ENST00000429344.6 protein_coding 3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3610641 3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413 Gene ID= ENSG00000105298.13 TPM= 52.52 Transcript Type= protein_coding chr19 3610650 3626815 3610650 3626815 - ENST00000248420.9@CACTIN ENST00000248420.9 protein_coding 3626596,3623688,3620707,3620127,3619080,3618875,3614397,3613464,3613058,3611904,3610650 3626815,3624162,3620802,3620272,3619242,3618989,3614589,3613586,3613365,3612413,3610971 Gene ID= ENSG00000105298.13 TPM= 17.21 Transcript Type= protein_coding chr19 3630177 3700516 3630177 3700516 - transcript799.chr19.nnic@PIP5K1C transcript799.chr19.nnic protein_coding 3700297,3667322,3664822,3661871,3660966,3656405,3653290,3651826,3648625,3647338,3645974,3644087,3643243,3641705,3638884,3630177 3700516,3667353,3664914,3662001,3661083,3656557,3653589,3652031,3648708,3647386,3646058,3644251,3643381,3641809,3639016,3633169 Gene ID= ENSG00000186111.9 TPM= 2.72 Transcript Type= NA chr19 3630183 3700479 3630183 3700479 - ENST00000335312.7@PIP5K1C ENST00000335312.7 protein_coding 3700297,3667322,3664822,3661871,3660966,3656405,3653290,3651826,3648625,3647338,3645974,3644087,3643243,3642907,3641705,3638884,3633437,3630183 3700479,3667353,3664914,3662001,3661083,3656557,3653589,3652031,3648708,3647386,3646058,3644251,3643381,3642939,3641809,3639016,3633520,3633169 Gene ID= ENSG00000186111.9 TPM= 28.07 Transcript Type= protein_coding chr19 3750870 3761695 3750870 3761695 - transcript806.chr19.nic@APBA3 transcript806.chr19.nic protein_coding 3761536,3759561,3754195,3754019,3753765,3752820,3752508,3751434,3751189,3750870 3761695,3760301,3754340,3754105,3753926,3752990,3752720,3751553,3751329,3751097 Gene ID= ENSG00000011132.11 TPM= 3.62 Transcript Type= NA chr19 3750781 3761695 3750781 3761695 - transcript807.chr19.nic@APBA3 transcript807.chr19.nic protein_coding 3761536,3759689,3759561,3754019,3753765,3752820,3752508,3751434,3751189,3750781 3761695,3760301,3759600,3754340,3753926,3752990,3752720,3751553,3751329,3751097 Gene ID= ENSG00000011132.11 TPM= 3.62 Transcript Type= NA chr19 3750880 3761699 3750880 3761699 - ENST00000316757.3@APBA3 ENST00000316757.3 protein_coding 3761536,3759689,3759561,3754195,3754019,3753765,3752820,3752508,3751434,3751189,3750880 3761699,3760301,3759600,3754340,3754105,3753926,3752990,3752720,3751553,3751329,3751097 Gene ID= ENSG00000011132.11 TPM= 26.26 Transcript Type= protein_coding chr19 3762664 3767565 3762664 3767565 + ENST00000330133.4@MRPL54 ENST00000330133.4 protein_coding 3762664,3765166,3767261 3762818,3765331,3767565 Gene ID= ENSG00000183617.4 TPM= 43.47 Transcript Type= protein_coding chr19 3958454 3971143 3958454 3971143 - transcript822.chr19.nic@DAPK3 transcript822.chr19.nic protein_coding 3971022,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958454 3971143,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637 Gene ID= ENSG00000167657.13 TPM= 86.93 Transcript Type= NA chr19 3958453 3971070 3958453 3971070 - ENST00000545797.6@DAPK3 ENST00000545797.6 protein_coding 3970921,3969674,3964631,3964244,3963871,3963643,3961009,3960059,3958453 3971070,3969829,3964991,3964373,3963919,3963669,3961161,3960104,3959637 Gene ID= ENSG00000167657.13 TPM= 6.34 Transcript Type= protein_coding chr19 3976056 3985469 3976056 3985469 - ENST00000309311.6@EEF2 ENST00000309311.6 protein_coding 3985378,3984136,3983110,3982807,3982246,3981947,3981339,3980841,3980514,3979808,3979329,3977819,3977428,3977215,3976056 3985469,3984350,3983291,3983018,3982424,3982052,3981452,3980979,3980709,3980066,3979436,3978172,3977610,3977347,3976747 Gene ID= ENSG00000167658.15 TPM= 3425.68 Transcript Type= protein_coding chr19 4007646 4039386 4007646 4039386 + ENST00000262971.2@PIAS4 ENST00000262971.2 protein_coding 4007646,4012923,4024036,4028146,4028510,4028720,4028931,4033100,4033420,4037374,4037616 4007787,4013349,4024120,4028187,4028600,4028848,4029036,4033173,4033580,4037504,4039386 Gene ID= ENSG00000105229.6 TPM= 36.22 Transcript Type= protein_coding chr19 4090321 4124129 4090321 4124129 - ENST00000262948.9@MAP2K2 ENST00000262948.9 protein_coding 4123784,4117419,4110509,4102376,4101229,4101019,4099201,4097279,4095388,4094453,4090321 4124129,4117629,4110655,4102453,4101280,4101143,4099414,4097343,4095449,4094498,4090708 Gene ID= ENSG00000126934.13 TPM= 448.92 Transcript Type= protein_coding chr19 4153601 4173054 4153601 4173054 + ENST00000078445.6@CREB3L3 ENST00000078445.6 protein_coding 4153601,4154899,4156995,4159664,4164503,4168351,4170140,4171091,4171383,4171656 4153774,4155027,4157295,4159782,4164640,4168457,4170208,4171175,4171479,4173054 Gene ID= ENSG00000060566.13 TPM= 7.24 Transcript Type= protein_coding chr19 4174109 4182604 4174109 4182604 - ENST00000337491.6@SIRT6 ENST00000337491.6 protein_coding 4182474,4180782,4179104,4177079,4175842,4175680,4175028,4174109 4182604,4180909,4179286,4177138,4175937,4175760,4175151,4174946 Gene ID= ENSG00000077463.14 TPM= 11.32 Transcript Type= protein_coding chr19 4174110 4182565 4174110 4182565 - ENST00000600938.5@SIRT6 ENST00000600938.5 protein_coding 4182474,4179104,4177079,4175842,4175680,4175028,4174110 4182565,4179286,4177138,4175937,4175760,4175151,4174946 Gene ID= ENSG00000077463.14 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr19 4182689 4224816 4182689 4224816 + transcript873.chr19.nnic@ANKRD24 transcript873.chr19.nnic protein_coding 4182689,4186390,4199683,4199875,4200083,4202026,4202869,4207242,4207501,4207781,4208764,4210058,4210265,4212475,4212600,4215978,4216284,4216550,4219591,4222670,4224127,4224428 4182740,4186461,4199769,4200005,4200171,4202090,4202926,4207312,4207607,4207968,4208801,4210138,4210372,4212513,4212698,4216050,4216402,4218163,4219758,4222795,4224192,4224816 Gene ID= ENSG00000089847.12 TPM= 3.62 Transcript Type= NA chr19 4182662 4224816 4182662 4224816 + transcript878.chr19.nnic@ANKRD24 transcript878.chr19.nnic protein_coding 4182662,4186390,4199875,4200083,4202026,4202869,4207242,4207501,4207781,4208764,4210058,4210265,4212475,4212600,4215978,4216284,4216550,4219591,4222670,4224127,4224428 4182740,4186461,4200005,4200171,4202090,4202926,4207312,4207607,4207968,4208801,4210138,4210372,4212513,4212698,4216050,4216402,4218163,4219758,4222795,4224192,4224816 Gene ID= ENSG00000089847.12 TPM= 3.62 Transcript Type= NA chr19 4229498 4237531 4229498 4237531 + ENST00000221847.5@EBI3 ENST00000221847.5 protein_coding 4229498,4231191,4233129,4234667,4236936 4229617,4231323,4233307,4234824,4237531 Gene ID= ENSG00000105246.5 TPM= 4.53 Transcript Type= protein_coding chr19 4247079 4269090 4247079 4269090 + ENST00000262962.11@CCDC94 ENST00000262962.11 protein_coding 4247079,4249228,4251027,4254355,4258242,4261994,4267624,4268584 4247170,4249328,4251171,4254489,4258423,4262114,4267774,4269090 Gene ID= ENSG00000105248.15 TPM= 28.98 Transcript Type= protein_coding chr19 4324043 4328222 4324043 4328222 - transcript905.chr19.nnic@STAP2 transcript905.chr19.nnic protein_coding 4328043,4327316,4327124,4326942,4325396,4325216,4324455,4324043 4328222,4327385,4327226,4327007,4325545,4325308,4324529,4324197 Gene ID= ENSG00000178078.11 TPM= 1.81 Transcript Type= NA chr19 4324043 4338877 4324043 4338877 - ENST00000594605.5@STAP2 ENST00000594605.5 protein_coding 4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043 4338877,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324529,4324197 Gene ID= ENSG00000178078.11 TPM= 28.98 Transcript Type= protein_coding chr19 4324043 4338821 4324043 4338821 - ENST00000600324.5@STAP2 ENST00000600324.5 protein_coding 4338652,4333973,4333694,4332022,4329961,4328675,4327316,4327124,4326942,4325396,4325216,4324455,4324043 4338821,4334044,4333816,4332078,4330061,4328809,4327385,4327226,4327007,4325545,4325308,4324667,4324197 Gene ID= ENSG00000178078.11 TPM= 4.53 Transcript Type= protein_coding chr19 4343593 4360081 4343593 4360081 + transcript893.chr19.nic@MPND transcript893.chr19.nic protein_coding 4343593,4345745,4352897,4354045,4354324,4354949,4355097,4357253,4357515,4358083,4359163,4359916 4343994,4345981,4353029,4354129,4354420,4355021,4355173,4357421,4357585,4358172,4359255,4360081 Gene ID= ENSG00000008382.15 TPM= 1.81 Transcript Type= NA chr19 4343554 4360081 4343554 4360081 + ENST00000359935.8@MPND ENST00000359935.8 protein_coding 4343554,4343708,4345745,4352897,4354045,4354324,4357253,4357515,4358083,4359163,4359916 4343600,4343994,4345981,4353029,4354129,4354420,4357421,4357585,4358172,4359255,4360081 Gene ID= ENSG00000008382.15 TPM= 11.77 Transcript Type= protein_coding chr19 4343559 4360072 4343559 4360072 + ENST00000599840.5@MPND ENST00000599840.5 protein_coding 4343559,4343708,4345745,4352897,4354045,4354324,4354949,4355097,4357253,4357515,4358083,4359163,4359916 4343600,4343994,4345981,4353029,4354129,4354420,4355021,4355173,4357421,4357585,4358172,4359255,4360072 Gene ID= ENSG00000008382.15 TPM= 27.17 Transcript Type= protein_coding chr19 4360370 4400547 4360370 4400547 - ENST00000269886.7@SH3GL1 ENST00000269886.7 protein_coding 4400324,4366926,4366501,4365482,4364088,4363720,4363370,4362612,4362329,4360370 4400547,4366994,4366573,4365625,4364221,4363878,4363473,4362736,4362385,4361796 Gene ID= ENSG00000141985.9 TPM= 263.06 Transcript Type= protein_coding chr19 4402612 4443396 4402612 4443396 + transcript911.chr19.nic@CHAF1A transcript911.chr19.nic protein_coding 4402612,4405912,4408903,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925 4402814,4405962,4409759,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443396 Gene ID= ENSG00000167670.15 TPM= 2.72 Transcript Type= NA chr19 4402587 4443396 4402587 4443396 + transcript913.chr19.nic@CHAF1A transcript913.chr19.nic protein_coding 4402587,4408903,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925 4402814,4409759,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443396 Gene ID= ENSG00000167670.15 TPM= 1.81 Transcript Type= NA chr19 4402608 4443396 4402608 4443396 + transcript914.chr19.nnic@CHAF1A transcript914.chr19.nnic protein_coding 4402608,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925 4402814,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443396 Gene ID= ENSG00000167670.15 TPM= 1.81 Transcript Type= NA chr19 4402662 4443392 4402662 4443392 + ENST00000301280.9@CHAF1A ENST00000301280.9 protein_coding 4402662,4405912,4408903,4418020,4422566,4423335,4423806,4428664,4429438,4429708,4430549,4431952,4433070,4442245,4442925 4402814,4405962,4409759,4418076,4422795,4423395,4423874,4428890,4429606,4429788,4430641,4432207,4433539,4442341,4443392 Gene ID= ENSG00000167670.15 TPM= 11.77 Transcript Type= protein_coding chr19 4445005 4471996 4445005 4471996 - transcript919.chr19.nnic@UBXN6 transcript919.chr19.nnic protein_coding 4471748,4457829,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445005 4471996,4458231,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623 Gene ID= ENSG00000167671.11 TPM= 11.93 Transcript Type= NA chr19 4445006 4457822 4445006 4457822 - ENST00000301281.10@UBXN6 ENST00000301281.10 protein_coding 4457615,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445006 4457822,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623 Gene ID= ENSG00000167671.11 TPM= 38.19 Transcript Type= protein_coding chr19 4445005 4449441 4445005 4449441 - transcript930.chr19.nnic@UBXN6 transcript930.chr19.nnic protein_coding 4449127,4448318,4447550,4446836,4446500,4446283,4446049,4445005 4449441,4448415,4447625,4446920,4446719,4446413,4446197,4445623 Gene ID= ENSG00000167671.11 TPM= 40.45 Transcript Type= NA chr19 4445005 4448964 4445005 4448964 - transcript931.chr19.nic@UBXN6 transcript931.chr19.nic protein_coding 4448318,4447550,4446836,4446500,4446283,4446049,4445005 4448964,4447625,4446920,4446719,4446413,4446197,4445623 Gene ID= ENSG00000167671.11 TPM= 30.49 Transcript Type= NA chr19 4445010 4455298 4445010 4455298 - ENST00000394765.7@UBXN6 ENST00000394765.7 protein_coding 4455221,4453930,4453458,4452364,4448318,4447550,4446836,4446500,4446283,4446049,4445010 4455298,4454093,4453522,4452492,4448415,4447625,4446920,4446719,4446413,4446197,4445623 Gene ID= ENSG00000167671.11 TPM= 19.17 Transcript Type= protein_coding chr19 4472272 4502219 4472272 4502219 + transcript936.chr19.nic@HDGFL2 transcript936.chr19.nic protein_coding 4472272,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4496919,4498306,4498814,4499491,4501191,4501911 4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4501317,4502219 Gene ID= ENSG00000167674.14 TPM= 3.62 Transcript Type= NA chr19 4472220 4502201 4472220 4502201 + transcript938.chr19.nic@HDGFL2 transcript938.chr19.nic protein_coding 4472220,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4497958,4498306,4498814,4499491,4501191 4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4502201 Gene ID= ENSG00000167674.14 TPM= 7.06 Transcript Type= NA chr19 4472306 4502207 4472306 4502207 + ENST00000621835.4@HDGFL2 ENST00000621835.4 protein_coding 4472306,4475275,4475445,4488676,4491566,4491764,4493703,4493982,4494166,4496302,4497958,4498306,4498814,4499491,4501191,4501914 4472422,4475351,4475583,4488876,4491682,4491835,4493862,4494057,4494475,4496405,4498031,4498376,4498915,4499704,4501317,4502207 Gene ID= ENSG00000167674.14 TPM= 4.35 Transcript Type= protein_coding chr19 4522527 4535253 4522527 4535253 - transcript951.chr19.nnic@PLIN5 transcript951.chr19.nnic protein_coding 4535165,4534015,4531627,4529784,4529073,4525633,4524963,4522527 4535253,4534095,4531822,4529866,4529253,4527370,4525076,4524085 Gene ID= ENSG00000214456.8 TPM= 2.72 Transcript Type= NA chr19 4522531 4535224 4522531 4535224 - ENST00000381848.7@PLIN5 ENST00000381848.7 protein_coding 4535165,4534015,4531627,4529784,4529073,4525633,4524963,4522531 4535224,4534095,4531822,4529866,4529253,4525832,4525076,4524085 Gene ID= ENSG00000214456.8 TPM= 25.36 Transcript Type= protein_coding chr19 4536409 4540474 4536409 4540474 - ENST00000306390.6@LRG1 ENST00000306390.6 protein_coding 4539982,4536409 4540474,4538951 Gene ID= ENSG00000171236.9 TPM= 19.02 Transcript Type= protein_coding chr19 4542587 4581789 4542587 4581789 - transcript960.chr19.nnic@SEMA6B transcript960.chr19.nnic protein_coding 4581463,4558337,4558026,4557163,4556951,4555988,4555474,4554976,4554388,4552422,4550799,4550123,4548263,4548027,4546392,4546216,4542587 4581789,4558489,4558149,4557223,4557013,4556089,4555564,4555095,4554476,4552639,4550930,4550272,4548445,4548173,4546469,4546274,4544529 Gene ID= ENSG00000167680.15 TPM= 21.73 Transcript Type= NA chr19 4542593 4559808 4542593 4559808 - ENST00000586582.5@SEMA6B ENST00000586582.5 protein_coding 4559530,4558337,4558026,4557163,4556951,4555988,4555474,4554976,4554388,4552422,4550799,4550123,4548263,4548027,4546392,4546216,4542593 4559808,4558489,4558149,4557223,4557013,4556089,4555564,4555095,4554476,4552639,4550930,4550272,4548445,4548173,4546469,4546274,4544529 Gene ID= ENSG00000167680.15 TPM= 23.54 Transcript Type= protein_coding chr19 4584164 4586073 4584164 4586073 + transcript967.chr19.nnic@NA transcript967.chr19.nnic NA 4584164,4585412,4585691 4584415,4585578,4586073 Gene ID= novel_gene_chr19_968 TPM= 4.53 Transcript Type= NA chr19 4639475 4655514 4639475 4655514 + transcript973.chr19.nnic@TNFAIP8L1 transcript973.chr19.nnic protein_coding 4639475,4651867,4654553 4639629,4653541,4655514 Gene ID= ENSG00000185361.8 TPM= 9.06 Transcript Type= NA chr19 4657545 4670360 4657545 4670360 - transcript972.chr19.nnic@MYDGF transcript972.chr19.nnic protein_coding 4670161,4668595,4664876,4659931,4657545 4670360,4668645,4664937,4660003,4658084 Gene ID= ENSG00000074842.7 TPM= 3.62 Transcript Type= NA chr19 4657545 4670370 4657545 4670370 - ENST00000262947.7@MYDGF ENST00000262947.7 protein_coding 4670161,4668595,4664876,4660669,4659931,4657545 4670370,4668645,4664937,4660750,4660003,4658084 Gene ID= ENSG00000074842.7 TPM= 193.79 Transcript Type= protein_coding chr19 4675225 4723807 4675225 4723807 - transcript976.chr19.nic@DPP9 transcript976.chr19.nic protein_coding 4723674,4722499,4722195,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4683190,4682696,4679835,4675225 4723807,4722551,4722304,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4683324,4682838,4679946,4676656 Gene ID= ENSG00000142002.16 TPM= 3.78 Transcript Type= NA chr19 4675225 4723825 4675225 4723825 - transcript978.chr19.nic@DPP9 transcript978.chr19.nic protein_coding 4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4683190,4682696,4679835,4675225 4723825,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4683324,4682838,4679946,4676656 Gene ID= ENSG00000142002.16 TPM= 9.21 Transcript Type= NA chr19 4675226 4723863 4675226 4723863 - ENST00000262960.13@DPP9 ENST00000262960.13 protein_coding 4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694661,4690878,4689570,4688757,4685626,4684663,4683477,4682696,4679835,4675226 4723863,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823,4690957,4689722,4688892,4685771,4684809,4683629,4682838,4679946,4676656 Gene ID= ENSG00000142002.16 TPM= 44.98 Transcript Type= protein_coding chr19 4694317 4723750 4694317 4723750 - ENST00000597849.5@DPP9 ENST00000597849.5 protein_coding 4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4695378,4694317 4723750,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4695555,4694823 Gene ID= ENSG00000142002.16 TPM= 3.62 Transcript Type= protein_coding chr19 4694318 4723813 4694318 4723813 - ENST00000601764.5@DPP9 ENST00000601764.5 protein_coding 4723674,4722499,4719851,4714081,4705858,4704131,4703886,4702603,4702027,4700216,4697551,4694318 4723813,4722551,4719941,4714337,4705970,4704304,4704054,4702716,4702155,4700277,4697651,4694823 Gene ID= ENSG00000142002.16 TPM= 1.81 Transcript Type= retained_intron chr19 4815932 4831704 4815932 4831704 - ENST00000248244.5@TICAM1 ENST00000248244.5 protein_coding 4831614,4815932 4831704,4818516 Gene ID= ENSG00000127666.9 TPM= 12.68 Transcript Type= protein_coding chr19 4838332 4838907 4838332 4838907 + ENST00000591657.1@AC027319.1 ENST00000591657.1 antisense_RNA 4838332,4838476 4838410,4838907 Gene ID= ENSG00000267484.1 TPM= 1.81 Transcript Type= antisense_RNA chr19 4838341 4867768 4838341 4867768 - ENST00000221957.8@PLIN3 ENST00000221957.8 protein_coding 4867609,4861329,4859826,4859590,4852016,4847691,4844668,4838341 4867768,4861411,4860024,4859672,4852301,4847890,4844793,4839536 Gene ID= ENSG00000105355.8 TPM= 867.06 Transcript Type= protein_coding chr19 4909498 4962151 4909498 4962151 + ENST00000624301.3@UHRF1 ENST00000624301.3 protein_coding 4909498,4910876,4929222,4930716,4932741,4941528,4941745,4944132,4944343,4945861,4947105,4950611,4950859,4954350,4954650,4956709,4960657 4909655,4911038,4929476,4930876,4932956,4941628,4941931,4944255,4944450,4945965,4947211,4950773,4950996,4954488,4954822,4956813,4962151 Gene ID= ENSG00000276043.4 TPM= 3.62 Transcript Type= protein_coding chr19 4988904 5153612 4988904 5153612 + transcript1012.chr19.nnic@KDM4B transcript1012.chr19.nnic protein_coding 4988904,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119118,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335 4989140,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119219,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153612 Gene ID= ENSG00000127663.14 TPM= 16.3 Transcript Type= NA chr19 4969111 5113005 4969111 5113005 + transcript1025.chr19.nnic@KDM4B transcript1025.chr19.nnic protein_coding 4969111,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5111775 4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5113005 Gene ID= ENSG00000127663.14 TPM= 1.81 Transcript Type= NA chr19 4969111 5081179 4969111 5081179 + transcript1026.chr19.nic@KDM4B transcript1026.chr19.nic protein_coding 4969111,5016257,5032866,5039836,5041137,5047476,5071010,5077367 4969230,5016339,5033031,5040011,5041251,5047669,5071059,5081179 Gene ID= ENSG00000127663.14 TPM= 24.45 Transcript Type= NA chr19 4969121 5153595 4969121 5153595 + ENST00000159111.8@KDM4B ENST00000159111.8 protein_coding 4969121,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335 4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595 Gene ID= ENSG00000127663.14 TPM= 32.6 Transcript Type= protein_coding chr19 4969113 5153595 4969113 5153595 + ENST00000611640.4@KDM4B ENST00000611640.4 protein_coding 4969113,5016257,5032866,5039836,5041137,5047476,5071010,5077367,5082367,5110622,5119118,5119653,5131076,5131887,5133883,5135339,5137262,5137621,5137962,5143967,5144248,5144783,5150358,5151335 4969230,5016339,5033031,5040011,5041251,5047669,5071059,5077470,5082504,5110818,5119219,5119852,5131545,5132007,5134061,5135561,5137338,5137676,5138070,5144152,5144412,5144902,5150450,5153595 Gene ID= ENSG00000127663.14 TPM= 22.64 Transcript Type= protein_coding chr19 5586992 5624144 5586992 5624144 - transcript1031.chr19.nnic@SAFB2 transcript1031.chr19.nnic protein_coding 5623951,5622530,5621309,5616422,5616132,5613465,5612540,5611120,5610639,5609995,5604787,5604583,5600130,5598793,5595361,5593891,5592747,5591748,5590278,5587868,5587701,5586992 5624144,5622774,5621396,5616486,5616335,5613527,5612567,5611630,5610688,5610095,5604936,5604695,5600260,5598884,5595497,5594178,5592887,5591793,5590408,5587980,5587767,5587399 Gene ID= ENSG00000130254.11 TPM= 68.82 Transcript Type= NA chr19 5586992 5622803 5586992 5622803 - transcript1038.chr19.nic@SAFB2 transcript1038.chr19.nic protein_coding 5622530,5621309,5616422,5616132,5613465,5611120,5610639,5609995,5604787,5604583,5600130,5598793,5595361,5593891,5592747,5591748,5590278,5587868,5587701,5586992 5622803,5621396,5616486,5616335,5613527,5612567,5610688,5610095,5604936,5604695,5600260,5598884,5595497,5594178,5592887,5591793,5590408,5587980,5587767,5587399 Gene ID= ENSG00000130254.11 TPM= 6.04 Transcript Type= NA chr19 5586992 5622786 5586992 5622786 - transcript1039.chr19.nic@SAFB2 transcript1039.chr19.nic protein_coding 5622530,5621309,5616422,5616132,5613465,5612540,5610639,5609995,5604787,5604583,5600130,5598793,5595361,5593891,5592747,5591748,5590278,5587868,5587701,5586992 5622786,5621396,5616486,5616335,5613527,5612567,5610688,5610095,5604936,5604695,5600260,5598884,5595497,5594178,5592887,5591793,5590408,5587980,5587767,5587399 Gene ID= ENSG00000130254.11 TPM= 4.83 Transcript Type= NA chr19 5623081 5668478 5623081 5668478 + transcript1041.chr19.nic@SAFB transcript1041.chr19.nic protein_coding 5623081,5626405,5641594,5641740,5645337,5648016,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661518,5664022,5664397,5667046,5667347,5667820,5668162 5623394,5626489,5641658,5641946,5645399,5648043,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668478 Gene ID= ENSG00000160633.12 TPM= 9.96 Transcript Type= NA chr19 5623118 5668466 5623118 5668466 + ENST00000592224.5@SAFB ENST00000592224.5 protein_coding 5623118,5626405,5641594,5641740,5645337,5648016,5648989,5649926,5650978,5653115,5653338,5654061,5654368,5657241,5661521,5664022,5664397,5667046,5667347,5667820,5668162 5623394,5626489,5641658,5641946,5645399,5648043,5649499,5649975,5651072,5653264,5653420,5654200,5654456,5657347,5661808,5664159,5664439,5667164,5667450,5667886,5668466 Gene ID= ENSG00000160633.12 TPM= 76.07 Transcript Type= protein_coding chr19 5678423 5680543 5678423 5680543 - transcript1055.chr19.nic@C19orf70 transcript1055.chr19.nic protein_coding 5680458,5679586,5679345,5678775,5678423 5680543,5679763,5679396,5679230,5678648 Gene ID= ENSG00000174917.8 TPM= 2.72 Transcript Type= NA chr19 5678422 5680896 5678422 5680896 - ENST00000309324.8@C19orf70 ENST00000309324.8 protein_coding 5680458,5679586,5679345,5678422 5680896,5679763,5679396,5678648 Gene ID= ENSG00000174917.8 TPM= 82.4 Transcript Type= protein_coding chr19 5678422 5680252 5678422 5680252 - ENST00000587950.5@C19orf70 ENST00000587950.5 protein_coding 5680055,5679586,5679345,5678422 5680252,5679763,5679396,5678648 Gene ID= ENSG00000174917.8 TPM= 4.53 Transcript Type= protein_coding chr19 5690196 5691876 5690196 5691876 + ENST00000347512.7@RPL36 ENST00000347512.7 protein_coding 5690196,5690506,5691319,5691532 5690327,5690600,5691453,5691876 Gene ID= ENSG00000130255.12 TPM= 802.61 Transcript Type= protein_coding chr19 5690316 5691667 5690316 5691667 + ENST00000394580.2@RPL36 ENST00000394580.2 protein_coding 5690316,5691319,5691532 5690600,5691453,5691667 Gene ID= ENSG00000130255.12 TPM= 59.16 Transcript Type= protein_coding chr19 5690306 5691653 5690306 5691653 + ENST00000579446.1@RPL36 ENST00000579446.1 protein_coding 5690306,5690506,5691319 5690327,5690600,5691653 Gene ID= ENSG00000130255.12 TPM= 1.2 Transcript Type= protein_coding chr19 5681009 5688522 5681009 5688522 + ENST00000581893.5@HSD11B1L ENST00000581893.5 protein_coding 5681009,5684965,5686900,5687282,5687503,5687753 5681271,5685119,5686991,5687375,5687668,5688522 Gene ID= ENSG00000167733.13 TPM= 1.99 Transcript Type= protein_coding chr19 5681048 5685589 5681048 5685589 + ENST00000422535.6@HSD11B1L ENST00000422535.6 protein_coding 5681048,5684819,5684989,5685302 5681271,5684905,5685119,5685589 Gene ID= ENSG00000167733.13 TPM= 4.53 Transcript Type= protein_coding chr19 5681064 5688522 5681064 5688522 + ENST00000339423.6@HSD11B1L ENST00000339423.6 protein_coding 5681064,5684819,5684989,5686416,5686900,5687282,5687503,5687753 5681271,5684905,5685119,5686527,5686991,5687375,5687668,5688522 Gene ID= ENSG00000167733.13 TPM= 4.71 Transcript Type= protein_coding chr19 5681024 5688522 5681024 5688522 + ENST00000301382.8@HSD11B1L ENST00000301382.8 protein_coding 5681024,5684819,5686900,5687282,5687503,5687753 5681271,5684905,5686991,5687375,5687668,5688522 Gene ID= ENSG00000167733.13 TPM= 1.99 Transcript Type= protein_coding chr19 5681054 5688522 5681054 5688522 + ENST00000578167.5@HSD11B1L ENST00000578167.5 protein_coding 5681054,5684819,5686900,5687282,5687503,5687753 5681271,5685119,5686991,5687375,5687668,5688522 Gene ID= ENSG00000167733.13 TPM= 1.99 Transcript Type= retained_intron chr19 5681037 5688522 5681037 5688522 + ENST00000579562.5@HSD11B1L ENST00000579562.5 protein_coding 5681037,5684819,5684989,5686900,5687282,5687503,5687753 5681271,5684905,5685119,5686991,5687375,5687668,5688522 Gene ID= ENSG00000167733.13 TPM= 2.9 Transcript Type= nonsense_mediated_decay chr19 5691834 5720290 5691834 5720290 - ENST00000360614.7@LONP1 ENST00000360614.7 protein_coding 5719704,5714183,5713134,5711771,5708342,5707697,5707060,5705772,5700789,5699027,5696670,5696249,5696054,5694761,5694387,5693552,5693298,5691834 5720290,5714271,5713253,5712002,5708403,5707826,5707143,5705992,5700927,5699205,5696757,5696371,5696170,5694901,5694552,5693769,5693462,5692208 Gene ID= ENSG00000196365.11 TPM= 2132.82 Transcript Type= protein_coding chr19 5782961 5791186 5782961 5791186 - transcript1143.chr19.nic@DUS3L transcript1143.chr19.nic protein_coding 5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5786467,5785603,5785383,5784377,5782961 5791186,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786845,5786542,5785791,5785511,5784439,5784053 Gene ID= ENSG00000141994.15 TPM= 2.72 Transcript Type= NA chr19 5785146 5791186 5785146 5791186 - transcript1145.chr19.nic@DUS3L transcript1145.chr19.nic protein_coding 5791044,5790047,5789207,5788357,5788024,5787589,5787296,5787061,5786749,5785603,5785146 5791186,5790335,5789719,5788398,5788176,5787705,5787361,5787171,5786845,5786542,5785511 Gene ID= ENSG00000141994.15 TPM= 1.81 Transcript Type= NA chr19 5805018 5828323 5805018 5828323 + transcript1147.chr19.nnic@NRTN transcript1147.chr19.nnic protein_coding 5805018,5823768,5827749 5805451,5824334,5828323 Gene ID= ENSG00000171119.2 TPM= 40.75 Transcript Type= NA chr19 5805064 5828323 5805064 5828323 + transcript1148.chr19.nnic@NRTN transcript1148.chr19.nnic protein_coding 5805064,5824159,5827749 5805451,5824334,5828323 Gene ID= ENSG00000171119.2 TPM= 1.81 Transcript Type= NA chr19 5894677 5903756 5894677 5903756 - ENST00000308961.4@NDUFA11 ENST00000308961.4 protein_coding 5903612,5896905,5896453,5894677 5903756,5896997,5896575,5894854 Gene ID= ENSG00000174886.12 TPM= 317.39 Transcript Type= protein_coding chr19 5894675 5903771 5894675 5903771 - ENST00000592634.5@NDUFA11 ENST00000592634.5 protein_coding 5903612,5896905,5894675 5903771,5896997,5896575 Gene ID= ENSG00000174886.12 TPM= 18.11 Transcript Type= protein_coding chr19 5894677 5903754 5894677 5903754 - ENST00000593233.1@NDUFA11 ENST00000593233.1 protein_coding 5903612,5901335,5896905,5896453,5894677 5903754,5901454,5896997,5896575,5894854 Gene ID= ENSG00000174886.12 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr19 5904847 5916203 5904847 5916203 + transcript1162.chr19.nnic@CAPS transcript1162.chr19.nnic protein_coding 5904847,5914385,5914563,5914940,5915221 5905081,5914489,5914740,5915146,5916203 Gene ID= ENSG00000105519.15 TPM= 5.43 Transcript Type= NA chr19 5914253 5915872 5914253 5915872 + transcript1175.chr19.nic@CAPS transcript1175.chr19.nic protein_coding 5914253,5914385,5915221 5914309,5915146,5915872 Gene ID= ENSG00000105519.15 TPM= 1.81 Transcript Type= NA chr19 5911707 5915877 5911707 5915877 + ENST00000588776.6@CAPS ENST00000588776.6 protein_coding 5911707,5914385,5914563,5914940,5915221 5914309,5914489,5914740,5915146,5915877 Gene ID= ENSG00000105519.15 TPM= 20.83 Transcript Type= protein_coding chr19 5916139 5978140 5916139 5978140 - ENST00000340578.10@RANBP3 ENST00000340578.10 protein_coding 5978061,5957918,5951393,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5916139 5978140,5957973,5951596,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653 Gene ID= ENSG00000031823.14 TPM= 17.5 Transcript Type= protein_coding chr19 5916139 5978108 5916139 5978108 - ENST00000439268.6@RANBP3 ENST00000439268.6 protein_coding 5978061,5957918,5951393,5941799,5941621,5933414,5932452,5931419,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5916139 5978108,5957973,5951596,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653 Gene ID= ENSG00000031823.14 TPM= 13.88 Transcript Type= protein_coding chr19 5917323 5978093 5917323 5978093 - ENST00000591092.5@RANBP3 ENST00000591092.5 protein_coding 5978061,5957918,5941799,5941621,5933414,5932452,5931419,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917323 5978093,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653 Gene ID= ENSG00000031823.14 TPM= 22.64 Transcript Type= protein_coding chr19 5917352 5978086 5917352 5978086 - ENST00000034275.12@RANBP3 ENST00000034275.12 protein_coding 5978061,5957918,5941799,5941621,5933414,5932452,5931404,5927968,5925634,5924827,5923812,5923194,5921201,5918496,5917794,5917352 5978086,5957973,5941835,5941707,5933479,5932544,5931531,5928087,5925737,5924905,5923914,5923303,5921321,5918638,5917980,5917653 Gene ID= ENSG00000031823.14 TPM= 1.81 Transcript Type= protein_coding chr19 6210379 6279948 6210379 6279948 - ENST00000252674.8@MLLT1 ENST00000252674.8 protein_coding 6279773,6270579,6262228,6230570,6226977,6222121,6217954,6216405,6213939,6213726,6213337,6210379 6279948,6270759,6262310,6230713,6227102,6222684,6218041,6216513,6214038,6213797,6213408,6213170 Gene ID= ENSG00000130382.8 TPM= 43.47 Transcript Type= protein_coding chr19 6361452 6368908 6361452 6368908 + ENST00000245816.8@CLPP ENST00000245816.8 protein_coding 6361452,6361869,6362446,6364452,6366258,6368538 6361772,6361940,6362542,6364639,6366363,6368908 Gene ID= ENSG00000125656.8 TPM= 113.65 Transcript Type= protein_coding chr19 6372433 6375251 6372433 6375251 + ENST00000245812.7@ALKBH7 ENST00000245812.7 protein_coding 6372433,6374203,6374465,6374811 6373024,6374376,6374589,6375251 Gene ID= ENSG00000125652.7 TPM= 86.48 Transcript Type= protein_coding chr19 6373471 6375027 6373471 6375027 + ENST00000596657.1@ALKBH7 ENST00000596657.1 protein_coding 6373471,6374203,6374465,6374811 6373557,6374376,6374589,6375027 Gene ID= ENSG00000125652.7 TPM= 2.26 Transcript Type= protein_coding chr19 6379569 6393460 6379569 6393460 - ENST00000394456.9@GTF2F1 ENST00000394456.9 protein_coding 6392984,6392857,6391902,6389444,6387389,6383311,6381697,6381554,6381359,6381122,6380904,6380573,6379569 6393460,6392903,6391974,6389637,6387559,6383495,6381850,6381615,6381478,6381195,6381042,6380690,6380485 Gene ID= ENSG00000125651.13 TPM= 110.48 Transcript Type= protein_coding chr19 6413110 6424810 6413110 6424810 - transcript1201.chr19.nnic@KHSRP transcript1201.chr19.nnic protein_coding 6424682,6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6415141,6413110 6424810,6424549,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301,6414120 Gene ID= ENSG00000088247.17 TPM= 3.78 Transcript Type= NA chr19 6413110 6424819 6413110 6424819 - transcript1207.chr19.nnic@KHSRP transcript1207.chr19.nnic protein_coding 6424689,6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6413110 6424819,6424556,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301 Gene ID= ENSG00000088247.17 TPM= 21.43 Transcript Type= NA chr19 6413110 6424849 6413110 6424849 - transcript1210.chr19.nic@KHSRP transcript1210.chr19.nic protein_coding 6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6413110 6424849,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301 Gene ID= ENSG00000088247.17 TPM= 25.96 Transcript Type= NA chr19 6413348 6424794 6413348 6424794 - ENST00000398148.7@KHSRP ENST00000398148.7 protein_coding 6424453,6422340,6421650,6421278,6420422,6420073,6419203,6418702,6418483,6417981,6417739,6416987,6416738,6416490,6416298,6415808,6415534,6415380,6415141,6413348 6424794,6422436,6421688,6421317,6420471,6420144,6419260,6418876,6418581,6418079,6417841,6417087,6416882,6416650,6416407,6415896,6415734,6415457,6415301,6414120 Gene ID= ENSG00000088247.17 TPM= 6.79 Transcript Type= protein_coding chr19 6436082 6459792 6436082 6459792 - transcript1219.chr19.nic@SLC25A23 transcript1219.chr19.nic protein_coding 6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6438447,6436082 6459792,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6438534,6436464 Gene ID= ENSG00000125648.14 TPM= 4.53 Transcript Type= NA chr19 6440065 6459843 6440065 6459843 - transcript1226.chr19.nnic@SLC25A23 transcript1226.chr19.nnic protein_coding 6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6441979,6440065 6459843,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159,6441123 Gene ID= ENSG00000125648.14 TPM= 4.53 Transcript Type= NA chr19 6436082 6459843 6436082 6459843 - transcript1231.chr19.nic@SLC25A23 transcript1231.chr19.nic protein_coding 6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6436082 6459843,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6436464 Gene ID= ENSG00000125648.14 TPM= 4.53 Transcript Type= NA chr19 6440063 6459843 6440063 6459843 - transcript1241.chr19.nic@SLC25A23 transcript1241.chr19.nic protein_coding 6459473,6458198,6457503,6456420,6454559,6454323,6453981,6444151,6440063 6459843,6458324,6457590,6456531,6454717,6454475,6454088,6444301,6442159 Gene ID= ENSG00000125648.14 TPM= 6.34 Transcript Type= NA chr19 6443564 6459791 6443564 6459791 - transcript1243.chr19.nic@SLC25A23 transcript1243.chr19.nic protein_coding 6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6443564 6459791,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301 Gene ID= ENSG00000125648.14 TPM= 10.87 Transcript Type= NA chr19 6440064 6459735 6440064 6459735 - ENST00000301454.8@SLC25A23 ENST00000301454.8 protein_coding 6459473,6458198,6457503,6456420,6454559,6454323,6453981,6452312,6444151,6440064 6459735,6458324,6457590,6456531,6454717,6454475,6454088,6452479,6444301,6442159 Gene ID= ENSG00000125648.14 TPM= 82.4 Transcript Type= protein_coding chr19 6467207 6481808 6467207 6481808 - ENST00000381480.6@DENND1C ENST00000381480.6 protein_coding 6481679,6479987,6479859,6479669,6478937,6478783,6477378,6477218,6477074,6476857,6475837,6475706,6475484,6475274,6472889,6471406,6471265,6470295,6469596,6468846,6468578,6468234,6467207 6481808,6480051,6479902,6479718,6479056,6478852,6477458,6477283,6477127,6476967,6475937,6475751,6475585,6475399,6472993,6471496,6471305,6470366,6469640,6468953,6468645,6468441,6468118 Gene ID= ENSG00000205744.9 TPM= 3.62 Transcript Type= protein_coding chr19 6494319 6502584 6494319 6502584 - ENST00000264071.6@TUBB4A ENST00000264071.6 protein_coding 6502156,6501515,6501287,6494319 6502584,6501623,6501397,6496221 Gene ID= ENSG00000104833.11 TPM= 153.04 Transcript Type= protein_coding chr19 6677704 6720682 6677704 6720682 - ENST00000245907.10@C3 ENST00000245907.10 protein_coding 6720516,6719211,6718247,6718094,6714352,6714166,6713992,6713407,6713189,6712508,6712257,6710987,6710639,6709684,6707800,6707466,6707076,6702471,6702127,6697652,6697344,6696593,6696379,6694431,6693412,6692924,6690629,6686746,6686124,6684988,6684775,6684560,6684388,6682142,6681941,6680158,6679407,6679125,6678372,6678152,6677704 6720682,6719403,6718412,6718164,6714446,6714248,6714082,6713509,6713315,6712623,6712406,6711196,6710845,6709842,6707929,6707537,6707273,6702579,6702212,6697794,6697556,6696659,6696465,6694634,6693487,6693083,6690727,6686902,6686287,6685146,6684834,6684650,6684439,6682229,6682030,6680263,6679496,6679208,6678455,6678287,6678023 Gene ID= ENSG00000125730.16 TPM= 1030.51 Transcript Type= protein_coding chr19 6730055 6737305 6730055 6737305 - transcript1294.chr19.nic@GPR108 transcript1294.chr19.nic protein_coding 6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6730055 6737305,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384 Gene ID= ENSG00000125734.15 TPM= 14.57 Transcript Type= NA chr19 6730086 6737260 6730086 6737260 - ENST00000430424.8@GPR108 ENST00000430424.8 protein_coding 6736990,6736592,6735908,6735622,6734183,6734005,6733845,6733570,6733168,6732987,6732476,6732263,6732025,6731891,6731473,6731199,6730987,6730086 6737260,6736711,6735958,6735704,6734307,6734054,6733913,6733674,6733301,6733062,6732549,6732380,6732155,6731934,6731522,6731282,6731111,6730384 Gene ID= ENSG00000125734.15 TPM= 41.66 Transcript Type= protein_coding chr19 6739691 6751517 6739691 6751517 + transcript1307.chr19.nic@TRIP10 transcript1307.chr19.nic protein_coding 6739691,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746452,6749934,6750292,6750512,6751063 6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751517 Gene ID= ENSG00000125733.17 TPM= 8.33 Transcript Type= NA chr19 6740672 6751517 6740672 6751517 + transcript1315.chr19.nic@TRIP10 transcript1315.chr19.nic protein_coding 6740672,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751063 6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751517 Gene ID= ENSG00000125733.17 TPM= 7.43 Transcript Type= NA chr19 6739680 6751526 6739680 6751526 + ENST00000313285.12@TRIP10 ENST00000313285.12 protein_coding 6739680,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746452,6749934,6750292,6750512,6751063 6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746561,6750066,6750431,6750633,6751526 Gene ID= ENSG00000125733.17 TPM= 88.02 Transcript Type= protein_coding chr19 6739714 6751509 6739714 6751509 + ENST00000600677.5@TRIP10 ENST00000600677.5 protein_coding 6739714,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746178,6746433,6749934,6750292,6750512,6751063 6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751509 Gene ID= ENSG00000125733.17 TPM= 8.33 Transcript Type= nonsense_mediated_decay chr19 6739727 6751523 6739727 6751523 + ENST00000313244.13@TRIP10 ENST00000313244.13 protein_coding 6739727,6741010,6741225,6742967,6743194,6743494,6743708,6744554,6744800,6746029,6746452,6749934,6750292,6750512,6751063 6739785,6741125,6741281,6743114,6743256,6743598,6743836,6744700,6744994,6746196,6746561,6750066,6750431,6750633,6751523 Gene ID= ENSG00000125733.17 TPM= 18.29 Transcript Type= protein_coding chr19 7123209 7294288 7123209 7294288 - transcript1329.chr19.nnic@INSR transcript1329.chr19.nnic protein_coding 7293792,7267345,7184316,7174583,7172290,7170537,7167968,7166154,7163032,7152726,7150497,7142816,7139907,7123209 7294288,7267896,7184637,7174731,7172434,7170751,7168094,7166404,7163199,7152927,7150532,7143090,7141816,7123251 Gene ID= ENSG00000171105.13 TPM= 3.47 Transcript Type= NA chr19 7159426 7294456 7159426 7294456 - transcript1331.chr19.nic@INSR transcript1331.chr19.nic protein_coding 7293792,7267345,7184316,7174583,7172290,7170537,7167968,7166154,7163032,7159426 7294456,7267896,7184637,7174731,7172434,7170751,7168094,7166404,7163199,7159645 Gene ID= ENSG00000171105.13 TPM= 3.92 Transcript Type= NA chr19 7178013 7294456 7178013 7294456 - transcript1333.chr19.nnic@INSR transcript1333.chr19.nnic protein_coding 7293792,7267345,7184316,7178013 7294456,7267896,7184637,7178189 Gene ID= ENSG00000171105.13 TPM= 2.72 Transcript Type= NA chr19 7112255 7293931 7112255 7293931 - ENST00000341500.9@INSR ENST00000341500.9 protein_coding 7293792,7267345,7184316,7174583,7172290,7170537,7167968,7166154,7163032,7152726,7142816,7141677,7132158,7128852,7126584,7125283,7122879,7122614,7120620,7119449,7112255 7293931,7267896,7184637,7174731,7172434,7170751,7168094,7166404,7163199,7152927,7143090,7141816,7132317,7128954,7126651,7125527,7122989,7122773,7120749,7119583,7117410 Gene ID= ENSG00000171105.13 TPM= 378.36 Transcript Type= protein_coding chr19 7355595 7472483 7355595 7472483 + transcript1335.chr19.nnic@AC008878.3 transcript1335.chr19.nnic protein_coding 7355595,7362781,7372812,7375720,7376643,7378394,7379122,7380917,7382792,7383062,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126,7470537 7355703,7362905,7373071,7375870,7376757,7378451,7379166,7380994,7382894,7383203,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7470315,7472483 Gene ID= ENSG00000268861.6 TPM= 5.28 Transcript Type= NA chr19 7355595 7472484 7355595 7472484 + transcript1337.chr19.nnic@AC008878.3 transcript1337.chr19.nnic protein_coding 7355595,7362781,7372812,7375720,7376643,7378394,7379122,7380917,7382792,7383062,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126 7355703,7362905,7373071,7375870,7376757,7378451,7379166,7380994,7382894,7383203,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7472484 Gene ID= ENSG00000268861.6 TPM= 9.81 Transcript Type= NA chr19 7355595 7472484 7355595 7472484 + transcript1338.chr19.nnic@AC008878.3 transcript1338.chr19.nnic protein_coding 7355595,7362781,7372812,7375720,7376643,7378394,7379122,7380917,7382792,7383062,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126 7355703,7362958,7373071,7375870,7376757,7378451,7379166,7380994,7382894,7383203,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7472484 Gene ID= ENSG00000268861.6 TPM= 8.9 Transcript Type= NA chr19 7395121 7472483 7395121 7472483 + transcript1342.chr19.nic@ARHGEF18 transcript1342.chr19.nic protein_coding 7395121,7440189,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126,7470537 7395247,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7470315,7472483 Gene ID= ENSG00000104880.17 TPM= 5.28 Transcript Type= NA chr19 7395120 7472484 7395120 7472484 + transcript1344.chr19.nic@ARHGEF18 transcript1344.chr19.nic protein_coding 7395120,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126 7395247,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7472484 Gene ID= ENSG00000104880.17 TPM= 19.77 Transcript Type= NA chr19 7395113 7472477 7395113 7472477 + ENST00000319670.13@ARHGEF18 ENST00000319670.13 protein_coding 7395113,7440344,7441653,7441912,7444204,7447043,7451149,7453467,7456327,7458512,7459903,7462152,7463818,7464560,7466918,7467071,7467214,7468825,7469904,7470126,7470537 7395247,7440482,7441765,7442052,7444454,7447168,7451266,7453715,7456403,7458690,7459994,7462334,7463955,7464690,7466974,7467118,7467684,7469131,7470029,7470315,7472477 Gene ID= ENSG00000104880.17 TPM= 14.33 Transcript Type= protein_coding chr19 7476875 7489019 7476875 7489019 - ENST00000221480.5@PEX11G ENST00000221480.5 protein_coding 7488951,7485838,7482033,7478314,7476875 7489019,7486026,7482211,7478376,7477436 Gene ID= ENSG00000104883.7 TPM= 31.69 Transcript Type= protein_coding chr19 7506795 7508447 7506795 7508447 + ENST00000601292.1@TEX45 ENST00000601292.1 protein_coding 7506795,7508206 7507141,7508447 Gene ID= ENSG00000198723.10 TPM= 2.72 Transcript Type= retained_intron chr19 7516118 7521026 7516118 7521026 + ENST00000597229.1@ZNF358 ENST00000597229.1 protein_coding 7516118,7519205 7516249,7521026 Gene ID= ENSG00000198816.6 TPM= 126.78 Transcript Type= protein_coding chr19 7522597 7534008 7522597 7534008 + transcript1367.chr19.nic@MCOLN1 transcript1367.chr19.nic protein_coding 7522597,7524961,7526439,7526761,7527520,7527864,7528158,7528597,7528821,7529101,7529590,7530435,7533523,7533759 7522781,7525166,7526606,7526926,7527628,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7534008 Gene ID= ENSG00000090674.15 TPM= 6.34 Transcript Type= NA chr19 7522626 7534009 7522626 7534009 + ENST00000264079.10@MCOLN1 ENST00000264079.10 protein_coding 7522626,7524961,7526439,7526761,7527520,7527864,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759 7522781,7525166,7526606,7526926,7527628,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7534009 Gene ID= ENSG00000090674.15 TPM= 201.18 Transcript Type= protein_coding chr19 7522671 7533990 7522671 7533990 + ENST00000394321.9@MCOLN1 ENST00000394321.9 protein_coding 7522671,7524961,7526439,7526761,7527520,7528158,7528597,7528821,7529101,7529590,7530286,7533523,7533759 7522781,7525166,7526606,7526926,7527960,7528257,7528703,7528970,7529202,7529712,7530501,7533653,7533990 Gene ID= ENSG00000090674.15 TPM= 3.78 Transcript Type= retained_intron chr19 7534155 7561769 7534155 7561769 + transcript1382.chr19.nic@PNPLA6 transcript1382.chr19.nic protein_coding 7534155,7534379,7534750,7535509,7535933,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553872,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488 7534239,7534446,7534902,7535577,7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561769 Gene ID= ENSG00000032444.15 TPM= 15.83 Transcript Type= NA chr19 7535704 7561769 7535704 7561769 + transcript1400.chr19.nic@PNPLA6 transcript1400.chr19.nic protein_coding 7535704,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553872,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488 7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561769 Gene ID= ENSG00000032444.15 TPM= 23.67 Transcript Type= NA chr19 7534750 7561764 7534750 7561764 + ENST00000450331.7@PNPLA6 ENST00000450331.7 protein_coding 7534750,7535127,7535509,7535933,7536191,7536449,7539918,7540149,7540630,7540923,7541354,7541522,7541984,7542561,7542761,7543007,7549907,7550298,7550517,7550994,7551362,7553872,7554209,7554555,7554893,7555249,7555607,7556453,7556655,7557168,7558850,7560648,7561014,7561208,7561488 7534902,7535202,7535577,7536020,7536273,7536546,7540058,7540308,7540710,7541051,7541434,7541684,7542067,7542670,7542928,7543084,7550112,7550429,7550640,7551107,7551437,7554015,7554272,7554723,7555075,7555367,7555763,7556569,7556724,7557284,7559151,7560764,7561110,7561317,7561764 Gene ID= ENSG00000032444.15 TPM= 7.68 Transcript Type= protein_coding chr19 7619525 7629565 7619525 7629565 - ENST00000358368.4@XAB2 ENST00000358368.4 protein_coding 7629477,7628150,7627728,7627243,7626136,7625880,7624301,7623731,7623170,7622762,7622530,7622331,7621135,7620846,7620547,7620275,7619946,7619747,7619525 7629565,7628298,7627851,7627440,7626270,7626044,7624445,7623882,7623289,7622893,7622661,7622444,7621297,7621036,7620669,7620446,7620075,7619856,7619647 Gene ID= ENSG00000076924.11 TPM= 29.88 Transcript Type= protein_coding chr19 7629786 7631622 7629786 7631622 + transcript1420.chr19.nic@PET100 transcript1420.chr19.nic protein_coding 7629786,7630573,7630823,7631232 7629860,7630659,7630846,7631622 Gene ID= ENSG00000229833.9 TPM= 3.62 Transcript Type= NA chr19 7629839 7631624 7629839 7631624 + ENST00000598540.6@PET100 ENST00000598540.6 protein_coding 7629839,7630573,7630823,7631232,7631473 7629860,7630659,7630846,7631321,7631624 Gene ID= ENSG00000229833.9 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr19 7629814 7631620 7629814 7631620 + ENST00000456958.7@PET100 ENST00000456958.7 protein_coding 7629814,7630823,7631473 7629860,7630846,7631620 Gene ID= ENSG00000229833.9 TPM= 3.62 Transcript Type= protein_coding chr19 7637106 7647874 7637106 7647874 + transcript1431.chr19.nic@STXBP2 transcript1431.chr19.nic protein_coding 7637106,7638726,7639019,7639731,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647354,7647725 7637186,7638775,7639100,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647247,7647511,7647874 Gene ID= ENSG00000076944.15 TPM= 7.85 Transcript Type= NA chr19 7637119 7647873 7637119 7647873 + ENST00000221283.9@STXBP2 ENST00000221283.9 protein_coding 7637119,7638726,7639019,7639731,7640731,7640900,7641705,7642034,7642203,7642429,7642766,7642983,7643165,7644614,7645197,7646249,7647162,7647354,7647725 7637186,7638775,7639100,7639807,7640809,7641003,7641853,7642118,7642333,7642536,7642823,7643048,7643245,7644752,7645306,7646344,7647247,7647511,7647873 Gene ID= ENSG00000076944.15 TPM= 77.58 Transcript Type= protein_coding chr19 7669044 7670454 7669044 7670454 + ENST00000221515.5@RETN ENST00000221515.5 protein_coding 7669044,7669317,7669821,7670219 7669121,7669444,7669898,7670454 Gene ID= ENSG00000104918.7 TPM= 1.81 Transcript Type= protein_coding chr19 7680875 7682856 7680875 7682856 + ENST00000317378.5@TRAPPC5 ENST00000317378.5 protein_coding 7680875,7682242 7681049,7682856 Gene ID= ENSG00000181029.8 TPM= 28.98 Transcript Type= protein_coding chr19 7680879 7682858 7680879 7682858 + ENST00000426877.2@TRAPPC5 ENST00000426877.2 protein_coding 7680879,7682242 7681026,7682858 Gene ID= ENSG00000181029.8 TPM= 29.88 Transcript Type= protein_coding chr19 7739994 7747534 7739994 7747534 - ENST00000315599.11@CD209 ENST00000315599.11 protein_coding 7747466,7747306,7746460,7745518,7744941,7744107,7739994 7747534,7747365,7746531,7746087,7745092,7744219,7743240 Gene ID= ENSG00000090659.17 TPM= 20.83 Transcript Type= protein_coding chr19 7787442 7791018 7787442 7791018 + transcript1450.chr19.nnic@CLEC4GP1 transcript1450.chr19.nnic unprocessed_pseudogene 7787442,7787870,7788324,7788796,7789209,7789496,7789760 7787559,7787978,7788608,7788900,7789304,7789643,7791018 Gene ID= ENSG00000268297.1 TPM= 1.94 Transcript Type= NA chr19 7787442 7791018 7787442 7791018 + transcript1453.chr19.nnic@CLEC4GP1 transcript1453.chr19.nnic unprocessed_pseudogene 7787442,7787870,7788308,7789209,7789496,7789760 7787559,7787978,7788900,7789304,7789643,7791018 Gene ID= ENSG00000268297.1 TPM= 2.84 Transcript Type= NA chr19 7787471 7791018 7787471 7791018 + transcript1456.chr19.nnic@CLEC4GP1 transcript1456.chr19.nnic unprocessed_pseudogene 7787471,7787870,7788308,7789209,7789496,7789760 7787600,7787978,7788900,7789304,7789643,7791018 Gene ID= ENSG00000268297.1 TPM= 1.94 Transcript Type= NA chr19 7787442 7791018 7787442 7791018 + transcript1458.chr19.nnic@CLEC4GP1 transcript1458.chr19.nnic unprocessed_pseudogene 7787442,7787870,7789209,7789496,7789760 7787559,7788900,7789304,7789643,7791018 Gene ID= ENSG00000268297.1 TPM= 1.94 Transcript Type= NA chr19 7830192 7864979 7830192 7864979 + transcript1459.chr19.nic@EVI5L transcript1459.chr19.nic protein_coding 7830192,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7857092,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424 7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7857124,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864979 Gene ID= ENSG00000142459.8 TPM= 9.06 Transcript Type= NA chr19 7830192 7864976 7830192 7864976 + transcript1463.chr19.nnic@EVI5L transcript1463.chr19.nnic protein_coding 7830192,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424 7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7863346,7864976 Gene ID= ENSG00000142459.8 TPM= 2.72 Transcript Type= NA chr19 7830192 7864975 7830192 7864975 + transcript1465.chr19.nic@EVI5L transcript1465.chr19.nic protein_coding 7830192,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185 7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7864975 Gene ID= ENSG00000142459.8 TPM= 5.43 Transcript Type= NA chr19 7830233 7864976 7830233 7864976 + ENST00000270530.8@EVI5L ENST00000270530.8 protein_coding 7830233,7846496,7847732,7848921,7849256,7849997,7851434,7851681,7853086,7853273,7856015,7858191,7860561,7861878,7862122,7862388,7862972,7863185,7863424 7830381,7846679,7847921,7849145,7849330,7850122,7851577,7851770,7853183,7853333,7856068,7858331,7860689,7862018,7862277,7862534,7863067,7863280,7864976 Gene ID= ENSG00000142459.8 TPM= 45.28 Transcript Type= protein_coding chr19 7868719 7874379 7868719 7874379 - ENST00000618550.4@PRR36 ENST00000618550.4 protein_coding 7874286,7873419,7873197,7872849,7869715,7868719 7874379,7873696,7873299,7872961,7872756,7869544 Gene ID= ENSG00000183248.11 TPM= 1.81 Transcript Type= protein_coding chr19 7888505 7902021 7888505 7902021 + ENST00000618098.4@LRRC8E ENST00000618098.4 protein_coding 7888505,7893717,7895599,7898661 7888600,7893859,7895741,7902021 Gene ID= ENSG00000171017.10 TPM= 2.26 Transcript Type= protein_coding chr19 7888505 7902016 7888505 7902016 + ENST00000306708.10@LRRC8E ENST00000306708.10 protein_coding 7888505,7895599,7898661 7888600,7895741,7902016 Gene ID= ENSG00000171017.10 TPM= 23.09 Transcript Type= protein_coding chr19 7903843 7914478 7903843 7914478 + ENST00000397981.7@MAP2K7 ENST00000397981.7 protein_coding 7903843,7909755,7910063,7910260,7910453,7910696,7910980,7911250,7911415,7912149,7912297 7904068,7909896,7910129,7910373,7910572,7910803,7911159,7911330,7911578,7912194,7914478 Gene ID= ENSG00000076984.17 TPM= 1.81 Transcript Type= protein_coding chr19 7903885 7914459 7903885 7914459 + ENST00000397983.7@MAP2K7 ENST00000397983.7 protein_coding 7903885,7905808,7909755,7910063,7910260,7910453,7910696,7910980,7911250,7911436,7912149,7912297 7904068,7905855,7909896,7910129,7910373,7910572,7910803,7911159,7911330,7911578,7912194,7914459 Gene ID= ENSG00000076984.17 TPM= 4.53 Transcript Type= protein_coding chr19 7903891 7914478 7903891 7914478 + ENST00000397979.3@MAP2K7 ENST00000397979.3 protein_coding 7903891,7909755,7910063,7910260,7910453,7910696,7910980,7911250,7911436,7912149,7912297 7904068,7909896,7910129,7910373,7910572,7910803,7911159,7911330,7911578,7912194,7914478 Gene ID= ENSG00000076984.17 TPM= 4.53 Transcript Type= protein_coding chr19 7920305 7923250 7920305 7923250 + transcript1484.chr19.nnic@SNAPC2 transcript1484.chr19.nnic protein_coding 7920305,7921423,7921705,7922035,7922484 7920549,7921542,7921773,7922347,7923250 Gene ID= ENSG00000104976.11 TPM= 2.26 Transcript Type= NA chr19 7921015 7923250 7921015 7923250 + transcript1487.chr19.nic@SNAPC2 transcript1487.chr19.nic protein_coding 7921015,7921423,7921705,7922035,7922445 7921240,7921542,7921773,7922347,7923250 Gene ID= ENSG00000104976.11 TPM= 5.59 Transcript Type= NA chr19 7920316 7923250 7920316 7923250 + ENST00000221573.10@SNAPC2 ENST00000221573.10 protein_coding 7920316,7921423,7921705,7922035,7922445 7920549,7921542,7921773,7922347,7923250 Gene ID= ENSG00000104976.11 TPM= 35.47 Transcript Type= protein_coding chr19 7921015 7923250 7921015 7923250 + ENST00000597584.5@SNAPC2 ENST00000597584.5 protein_coding 7921015,7921423,7921705,7922035,7922445 7921119,7921542,7921773,7922347,7923250 Gene ID= ENSG00000104976.11 TPM= 12.83 Transcript Type= protein_coding chr19 7924485 7926166 7924485 7926166 - ENST00000318978.5@CTXN1 ENST00000318978.5 protein_coding 7925967,7924485 7926166,7925558 Gene ID= ENSG00000178531.5 TPM= 10.87 Transcript Type= protein_coding chr19 7926718 7943727 7926718 7943727 - transcript1498.chr19.nic@TIMM44 transcript1498.chr19.nic protein_coding 7943607,7941102,7938027,7935065,7934089,7933485,7932840,7932627,7931138,7928077,7927657,7926718 7943727,7941197,7938197,7935145,7934238,7934003,7932932,7932751,7931188,7928166,7927767,7927306 Gene ID= ENSG00000104980.7 TPM= 9.96 Transcript Type= NA chr19 7926718 7943804 7926718 7943804 - transcript1501.chr19.nic@TIMM44 transcript1501.chr19.nic protein_coding 7943607,7941102,7938027,7935065,7934089,7933485,7932840,7931138,7928077,7927657,7926718 7943804,7941197,7938197,7935145,7934238,7934003,7932932,7932751,7928166,7927767,7927306 Gene ID= ENSG00000104980.7 TPM= 2.72 Transcript Type= NA chr19 8209145 8262434 8209145 8262434 + transcript1515.chr19.nnic@CERS4 transcript1515.chr19.nnic protein_coding 8209145,8210706,8241341,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930 8209494,8210862,8241457,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262434 Gene ID= ENSG00000090661.11 TPM= 9.06 Transcript Type= NA chr19 8209330 8262432 8209330 8262432 + transcript1528.chr19.nic@CERS4 transcript1528.chr19.nic protein_coding 8209330,8210706,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930 8209494,8210862,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262432 Gene ID= ENSG00000090661.11 TPM= 1.81 Transcript Type= NA chr19 8209353 8262421 8209353 8262421 + ENST00000251363.9@CERS4 ENST00000251363.9 protein_coding 8209353,8210706,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930 8209494,8210862,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421 Gene ID= ENSG00000090661.11 TPM= 13.88 Transcript Type= protein_coding chr19 8209371 8262421 8209371 8262421 + ENST00000559336.5@CERS4 ENST00000559336.5 protein_coding 8209371,8210706,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8261930 8209494,8210862,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8262421 Gene ID= ENSG00000090661.11 TPM= 1.2 Transcript Type= protein_coding chr19 8209356 8262421 8209356 8262421 + ENST00000559450.5@CERS4 ENST00000559450.5 protein_coding 8209356,8251076,8254499,8255607,8255822,8256236,8256618,8256949,8257879,8261688,8261930 8209494,8251249,8254616,8255725,8255879,8256286,8256710,8257077,8257985,8261844,8262421 Gene ID= ENSG00000090661.11 TPM= 5.73 Transcript Type= protein_coding chr19 8302127 8308350 8302127 8308350 - ENST00000537716.6@CD320 ENST00000537716.6 protein_coding 8308149,8303855,8302777,8302127 8308350,8304088,8302980,8302605 Gene ID= ENSG00000167775.10 TPM= 2.87 Transcript Type= protein_coding chr19 8302126 8308354 8302126 8308354 - transcript1543.chr19.nnic@CD320 transcript1543.chr19.nnic protein_coding 8308149,8302777,8302126 8308354,8302980,8302605 Gene ID= ENSG00000167775.10 TPM= 5.13 Transcript Type= NA chr19 8302127 8308355 8302127 8308355 - ENST00000301458.9@CD320 ENST00000301458.9 protein_coding 8308149,8305031,8303855,8302777,8302127 8308355,8305156,8304088,8302980,8302605 Gene ID= ENSG00000167775.10 TPM= 145.95 Transcript Type= protein_coding chr19 8321500 8323340 8321500 8323340 + ENST00000600659.2@RPS28 ENST00000600659.2 protein_coding 8321500,8321656,8321953,8322272 8321569,8321703,8322091,8323340 Gene ID= ENSG00000233927.4 TPM= 703.61 Transcript Type= protein_coding chr19 8323306 8343262 8323306 8343262 - transcript1554.chr19.nnic@KANK3 transcript1554.chr19.nnic protein_coding 8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8323306 8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8323563 Gene ID= ENSG00000186994.11 TPM= 3.62 Transcript Type= NA chr19 8322582 8343265 8322582 8343265 - transcript1557.chr19.nic@KANK3 transcript1557.chr19.nic protein_coding 8343225,8337795,8334500,8333910,8333724,8333014,8324951,8324630,8324449,8322582 8343265,8337856,8335792,8334419,8333808,8333230,8325096,8324830,8324547,8322922 Gene ID= ENSG00000186994.11 TPM= 19.02 Transcript Type= NA chr19 8322584 8343262 8322584 8343262 - ENST00000330915.7@KANK3 ENST00000330915.7 protein_coding 8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8322584 8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8322922 Gene ID= ENSG00000186994.11 TPM= 105.95 Transcript Type= protein_coding chr19 8323315 8343262 8323315 8343262 - ENST00000593649.5@KANK3 ENST00000593649.5 protein_coding 8343225,8337795,8334500,8334320,8333910,8333724,8333014,8324951,8324630,8324449,8323315 8343262,8337856,8335792,8334419,8334116,8333808,8333230,8325096,8324830,8324547,8323538 Gene ID= ENSG00000186994.11 TPM= 8.15 Transcript Type= protein_coding chr19 8364151 8374373 8364151 8374373 + ENST00000301455.6@ANGPTL4 ENST00000301455.6 protein_coding 8364151,8365954,8366202,8369219,8371056,8371241,8373705 8364639,8366064,8366319,8369332,8371151,8371522,8374373 Gene ID= ENSG00000167772.11 TPM= 33.51 Transcript Type= protein_coding chr19 8364169 8374331 8364169 8374331 + ENST00000393962.6@ANGPTL4 ENST00000393962.6 protein_coding 8364169,8365954,8366202,8371056,8371241,8373705 8364639,8366064,8366319,8371151,8371522,8374331 Gene ID= ENSG00000167772.11 TPM= 2.72 Transcript Type= protein_coding chr19 8374379 8390685 8374379 8390685 - ENST00000593581.5@RAB11B-AS1 ENST00000593581.5 antisense_RNA 8390009,8376962,8374379 8390685,8377067,8374608 Gene ID= ENSG00000269386.5 TPM= 10.87 Transcript Type= antisense_RNA chr19 8390199 8404434 8390199 8404434 + ENST00000328024.10@RAB11B ENST00000328024.10 protein_coding 8390199,8399863,8402086,8402485,8403413 8390456,8400058,8402279,8402565,8404434 Gene ID= ENSG00000185236.11 TPM= 323.28 Transcript Type= protein_coding chr19 8413277 8439016 8413277 8439016 + transcript1607.chr19.nic@MARCH2 transcript1607.chr19.nic protein_coding 8413277,8418537,8421789,8426609,8430658,8438388 8413420,8418807,8422016,8426804,8430867,8439016 Gene ID= ENSG00000099785.10 TPM= 32.51 Transcript Type= NA chr19 8413284 8439016 8413284 8439016 + transcript1608.chr19.nic@MARCH2 transcript1608.chr19.nic protein_coding 8413284,8418537,8421789,8426609,8430658,8438388 8413794,8418807,8422016,8426804,8430867,8439016 Gene ID= ENSG00000099785.10 TPM= 6.02 Transcript Type= NA chr19 8413303 8439011 8413303 8439011 + ENST00000215555.6@MARCH2 ENST00000215555.6 protein_coding 8413303,8421789,8426609,8430658,8438388 8413420,8422016,8426804,8430867,8439011 Gene ID= ENSG00000099785.10 TPM= 24.36 Transcript Type= protein_coding chr19 8444767 8489114 8444767 8489114 + ENST00000348943.7@HNRNPM ENST00000348943.7 protein_coding 8444767,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691 8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114 Gene ID= ENSG00000099783.11 TPM= 65.95 Transcript Type= protein_coding chr19 8444971 8489118 8444971 8489118 + transcript1581.chr19.nic@HNRNPM transcript1581.chr19.nic protein_coding 8444971,8455405,8462529,8463497,8463593,8465324,8465480,8466235,8467535,8468774,8471326,8473664,8474167,8485603,8487024,8488691 8445111,8455574,8462581,8463504,8463686,8465362,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8486405,8487075,8489118 Gene ID= ENSG00000099783.11 TPM= 10.05 Transcript Type= NA chr19 8444959 8489118 8444959 8489118 + transcript1594.chr19.nic@HNRNPM transcript1594.chr19.nic protein_coding 8444959,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8485603,8487024,8488691 8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8486405,8487075,8489118 Gene ID= ENSG00000099783.11 TPM= 21.82 Transcript Type= NA chr19 8444961 8489118 8444961 8489118 + transcript1597.chr19.nic@HNRNPM transcript1597.chr19.nic protein_coding 8444961,8455405,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691 8445111,8455574,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489118 Gene ID= ENSG00000099783.11 TPM= 8 Transcript Type= NA chr19 8444958 8489114 8444958 8489114 + ENST00000325495.8@HNRNPM ENST00000325495.8 protein_coding 8444958,8455405,8462529,8463497,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691 8445111,8455574,8462581,8463504,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489114 Gene ID= ENSG00000099783.11 TPM= 121.19 Transcript Type= protein_coding chr19 8444990 8489110 8444990 8489110 + ENST00000620401.4@HNRNPM ENST00000620401.4 protein_coding 8444990,8455405,8462529,8463593,8465324,8466235,8467535,8468774,8471326,8473664,8474167,8483158,8485603,8487024,8488691 8445111,8455574,8462589,8463686,8465515,8466388,8467584,8468834,8471427,8473708,8474244,8483211,8486405,8487075,8489110 Gene ID= ENSG00000099783.11 TPM= 4.37 Transcript Type= protein_coding chr19 8511335 8514148 8511335 8514148 - ENST00000255616.8@ZNF414 ENST00000255616.8 protein_coding 8514044,8513029,8512604,8512387,8511617,8511335 8514148,8513341,8512711,8512492,8511960,8511536 Gene ID= ENSG00000133250.13 TPM= 2.72 Transcript Type= protein_coding chr19 8520790 8577577 8520790 8577577 - ENST00000338257.12@MYO1F ENST00000338257.12 protein_coding 8577307,8555659,8554654,8554477,8553350,8553139,8552033,8551740,8550562,8550160,8548237,8548036,8545650,8544297,8541906,8539947,8536949,8536499,8536252,8530459,8530196,8527338,8526789,8526453,8525479,8522634,8522377,8520790 8577577,8555796,8554743,8554571,8553437,8553228,8552164,8551874,8550694,8550356,8548317,8548122,8545736,8544464,8541991,8540028,8537055,8536597,8536396,8530573,8530365,8527483,8526935,8526601,8525562,8522829,8522546,8521604 Gene ID= ENSG00000142347.16 TPM= 17.21 Transcript Type= protein_coding chr19 8521098 8525589 8521098 8525589 - transcript1627.chr19.nic@MYO1F transcript1627.chr19.nic protein_coding 8525479,8522634,8522377,8521098 8525589,8522829,8522546,8521604 Gene ID= ENSG00000142347.16 TPM= 1.81 Transcript Type= NA chr19 8580242 8610696 8580242 8610696 - transcript1635.chr19.nnic@ADAMTS10 transcript1635.chr19.nnic protein_coding 8610644,8605012,8603728,8600928,8597234,8596987,8596542,8596073,8595779,8592763,8591958,8591800,8589889,8589452,8589242,8586816,8586558,8586344,8586122,8585456,8585132,8584895,8580242 8610696,8605358,8603884,8601145,8597322,8597132,8596585,8596412,8595903,8592870,8592103,8591863,8589991,8589585,8589365,8586896,8586721,8586470,8586251,8585660,8585308,8585054,8581002 Gene ID= ENSG00000142303.13 TPM= 3.32 Transcript Type= NA chr19 8580242 8592196 8580242 8592196 - ENST00000595838.5@ADAMTS10 ENST00000595838.5 protein_coding 8591958,8591800,8589889,8589452,8589242,8586816,8586558,8586344,8586122,8585456,8585132,8584895,8580242 8592196,8591863,8589991,8589574,8589365,8586896,8586721,8586470,8586251,8585660,8585308,8585054,8581002 Gene ID= ENSG00000142303.13 TPM= 3.32 Transcript Type= protein_coding chr19 8594770 8610718 8594770 8610718 - transcript1640.chr19.nic@ADAMTS10 transcript1640.chr19.nic protein_coding 8610644,8605623,8605012,8603728,8600928,8597234,8596987,8596542,8596307,8596073,8594770 8610718,8605809,8605358,8603884,8601145,8597317,8597132,8596585,8596412,8596219,8595903 Gene ID= ENSG00000142303.13 TPM= 1.81 Transcript Type= NA chr19 8580242 8608265 8580242 8608265 - ENST00000270328.8@ADAMTS10 ENST00000270328.8 protein_coding 8608134,8605623,8605012,8603728,8600928,8597234,8596987,8596542,8596307,8596073,8595762,8592763,8591958,8591800,8589889,8589452,8589242,8586816,8586558,8586344,8586122,8585456,8585132,8584895,8580242 8608265,8605809,8605358,8603884,8601145,8597317,8597132,8596585,8596412,8596219,8595903,8592870,8592103,8591863,8589991,8589585,8589365,8586896,8586721,8586470,8586251,8585660,8585308,8585054,8581002 Gene ID= ENSG00000142303.13 TPM= 6.95 Transcript Type= protein_coding chr19 8809706 8832315 8809706 8832315 - transcript1642.chr19.nnic@ZNF558 transcript1642.chr19.nnic protein_coding 8832079,8831318,8830770,8825002,8824082,8822629,8822003,8821442,8821180,8813127,8812561,8809706 8832315,8831401,8830891,8825108,8824417,8822724,8822091,8821635,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 1.81 Transcript Type= NA chr19 8808761 8832315 8808761 8832315 - transcript1644.chr19.nnic@ZNF558 transcript1644.chr19.nnic protein_coding 8832079,8831318,8825002,8824082,8822629,8822003,8821442,8821180,8813127,8812561,8808761 8832315,8831401,8825108,8824417,8822724,8822091,8821635,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 2.72 Transcript Type= NA chr19 8809632 8832315 8809632 8832315 - transcript1647.chr19.nic@ZNF558 transcript1647.chr19.nic protein_coding 8832079,8831318,8830770,8825002,8824082,8822629,8821442,8821180,8813127,8812561,8809632 8832315,8831401,8830891,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 1.81 Transcript Type= NA chr19 8809706 8832315 8809706 8832315 - transcript1651.chr19.nic@ZNF558 transcript1651.chr19.nic protein_coding 8832079,8831318,8830770,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809706 8832315,8831401,8830891,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 4.53 Transcript Type= NA chr19 8809706 8832313 8809706 8832313 - transcript1652.chr19.nic@ZNF558 transcript1652.chr19.nic protein_coding 8832209,8831318,8830770,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809706 8832313,8831401,8830891,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 2.72 Transcript Type= NA chr19 8808342 8832313 8808342 8832313 - transcript1654.chr19.nic@ZNF558 transcript1654.chr19.nic protein_coding 8832209,8831318,8825002,8824082,8822629,8821442,8821180,8813127,8812561,8808342 8832313,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 3.62 Transcript Type= NA chr19 8809707 8832315 8809707 8832315 - transcript1655.chr19.nic@ZNF558 transcript1655.chr19.nic protein_coding 8832079,8831318,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8809707 8832315,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 8.15 Transcript Type= NA chr19 8806170 8832328 8806170 8832328 - ENST00000601372.5@ZNF558 ENST00000601372.5 protein_coding 8832209,8831318,8825002,8824082,8822629,8822003,8821180,8813127,8812561,8806170 8832328,8831401,8825108,8824417,8822724,8822091,8821306,8813222,8812643,8812063 Gene ID= ENSG00000167785.8 TPM= 9.06 Transcript Type= protein_coding chr19 9140380 9163413 9140380 9163413 + transcript1663.chr19.nnic@ZNF317 transcript1663.chr19.nnic protein_coding 9140380,9155925,9156612,9157268,9157980,9158826,9160114,9163055 9140592,9156041,9156748,9157394,9158075,9158908,9162960,9163413 Gene ID= ENSG00000130803.14 TPM= 1.81 Transcript Type= NA chr19 9140380 9163418 9140380 9163418 + transcript1664.chr19.nnic@ZNF317 transcript1664.chr19.nnic protein_coding 9140380,9155925,9156612,9157268,9157980,9158826,9160114 9140592,9156041,9156736,9157394,9158075,9158908,9163418 Gene ID= ENSG00000130803.14 TPM= 2.11 Transcript Type= NA chr19 9140380 9163413 9140380 9163413 + transcript1666.chr19.nic@ZNF317 transcript1666.chr19.nic protein_coding 9140380,9155925,9156612,9157268,9157980,9158826,9163055 9140592,9156041,9156748,9157394,9158075,9158908,9163413 Gene ID= ENSG00000130803.14 TPM= 1.81 Transcript Type= NA chr19 9140380 9163413 9140380 9163413 + ENST00000247956.10@ZNF317 ENST00000247956.10 protein_coding 9140380,9155925,9156612,9157268,9157980,9158826,9160114 9140592,9156041,9156748,9157394,9158075,9158908,9163413 Gene ID= ENSG00000130803.14 TPM= 29.28 Transcript Type= protein_coding chr19 9140397 9163408 9140397 9163408 + ENST00000360385.7@ZNF317 ENST00000360385.7 protein_coding 9140397,9155925,9156612,9157268,9158826,9160114 9140592,9156041,9156748,9157394,9158908,9163408 Gene ID= ENSG00000130803.14 TPM= 2.11 Transcript Type= protein_coding chr19 9324222 9343843 9324222 9343843 + transcript1686.chr19.nic@ZNF559 transcript1686.chr19.nic protein_coding 9324222,9324695,9337796,9338494,9339193,9341102,9341617 9324404,9324780,9337858,9338582,9339319,9341184,9343843 Gene ID= ENSG00000188321.13 TPM= 2.72 Transcript Type= NA chr19 9324289 9343843 9324289 9343843 + transcript1688.chr19.nic@ZNF559 transcript1688.chr19.nic protein_coding 9324289,9324695,9337796,9338494,9339193,9341102,9341617 9324404,9324780,9338017,9338582,9339319,9341184,9343843 Gene ID= ENSG00000188321.13 TPM= 1.81 Transcript Type= NA chr19 9412427 9435591 9412427 9435591 - transcript1712.chr19.nic@ZNF266 transcript1712.chr19.nic protein_coding 9435284,9435108,9434798,9434075,9433668,9420065,9418505,9417828,9415654,9412427 9435591,9435193,9434859,9434235,9433786,9420218,9419299,9417908,9415742,9414720 Gene ID= ENSG00000174652.17 TPM= 2.72 Transcript Type= NA chr19 9412596 9435591 9412596 9435591 - transcript1717.chr19.nnic@ZNF266 transcript1717.chr19.nnic protein_coding 9435284,9435108,9434798,9420065,9419217,9418505,9417828,9415654,9412596 9435591,9435193,9434859,9420218,9419299,9418631,9417908,9415742,9414720 Gene ID= ENSG00000174652.17 TPM= 1.81 Transcript Type= NA chr19 9412596 9435591 9412596 9435591 - transcript1721.chr19.nic@ZNF266 transcript1721.chr19.nic protein_coding 9435284,9435108,9420065,9418766,9418505,9417828,9415654,9412596 9435591,9435193,9420218,9419299,9418631,9417908,9415742,9414720 Gene ID= ENSG00000174652.17 TPM= 1.81 Transcript Type= NA chr19 9412596 9435591 9412596 9435591 - transcript1723.chr19.nic@ZNF266 transcript1723.chr19.nic protein_coding 9435284,9435108,9434798,9420065,9418505,9417828,9415654,9412596 9435591,9435193,9434859,9420218,9419299,9417908,9415742,9414720 Gene ID= ENSG00000174652.17 TPM= 1.81 Transcript Type= NA chr19 9412596 9435591 9412596 9435591 - transcript1726.chr19.nic@ZNF266 transcript1726.chr19.nic protein_coding 9435284,9435108,9420065,9418505,9417828,9415654,9412596 9435591,9435193,9420218,9419299,9417908,9415742,9414720 Gene ID= ENSG00000174652.17 TPM= 3.62 Transcript Type= NA chr19 9526366 9584501 9526366 9584501 - transcript1729.chr19.nnic@ZNF426 transcript1729.chr19.nnic protein_coding 9584461,9569002,9568095,9538259,9536208,9535188,9533840,9532845,9530985,9526366 9584501,9569082,9568175,9538345,9536356,9535279,9533966,9532925,9531067,9529636 Gene ID= ENSG00000130818.11 TPM= 2.72 Transcript Type= NA chr19 9526366 9538614 9526366 9538614 - transcript1733.chr19.nic@ZNF426 transcript1733.chr19.nic protein_coding 9538259,9536208,9535188,9533840,9532845,9530985,9526366 9538614,9536356,9535279,9533966,9532925,9531067,9529636 Gene ID= ENSG00000130818.11 TPM= 10.87 Transcript Type= NA chr19 9538739 9539734 9538739 9539734 + ENST00000619671.1@AC008567.3 ENST00000619671.1 lincRNA 9538739,9539136 9538998,9539734 Gene ID= ENSG00000278611.1 TPM= 1.81 Transcript Type= lincRNA chr19 9652230 9675085 9652230 9675085 - transcript1747.chr19.nnic@ZNF562 transcript1747.chr19.nnic protein_coding 9675015,9660720,9652230 9675085,9660874,9653881 Gene ID= ENSG00000171466.9 TPM= 1.81 Transcript Type= NA chr19 9810267 9819055 9810267 9819055 - ENST00000247977.8@FBXL12 ENST00000247977.8 protein_coding 9818728,9818545,9810267 9819055,9818617,9811717 Gene ID= ENSG00000127452.8 TPM= 19.24 Transcript Type= protein_coding chr19 9810271 9819076 9810271 9819076 - ENST00000588922.5@FBXL12 ENST00000588922.5 protein_coding 9818754,9818545,9810271 9819076,9818617,9811717 Gene ID= ENSG00000127452.8 TPM= 5.66 Transcript Type= protein_coding chr19 9810267 9819079 9810267 9819079 - ENST00000589626.5@FBXL12 ENST00000589626.5 protein_coding 9818728,9818545,9813231,9810267 9819079,9818617,9813274,9811717 Gene ID= ENSG00000127452.8 TPM= 3.85 Transcript Type= protein_coding chr19 9810267 9818829 9810267 9818829 - ENST00000586651.5@FBXL12 ENST00000586651.5 protein_coding 9818545,9810267 9818829,9811717 Gene ID= ENSG00000127452.8 TPM= 1.13 Transcript Type= protein_coding chr19 9827892 9830114 9827892 9830114 + ENST00000586895.5@UBL5 ENST00000586895.5 protein_coding 9827892,9828327,9828592,9828837,9829965 9827984,9828393,9828675,9828874,9830114 Gene ID= ENSG00000198258.10 TPM= 202.39 Transcript Type= protein_coding chr19 9827892 9830115 9827892 9830115 + ENST00000358666.7@UBL5 ENST00000358666.7 protein_coding 9827892,9828327,9828592,9828837,9829965 9828064,9828393,9828675,9828874,9830115 Gene ID= ENSG00000198258.10 TPM= 34.41 Transcript Type= protein_coding chr19 9827896 9830115 9827896 9830115 + ENST00000589960.5@UBL5 ENST00000589960.5 protein_coding 9827896,9828327,9829965 9827984,9828393,9830115 Gene ID= ENSG00000198258.10 TPM= 3.62 Transcript Type= processed_transcript chr19 9835323 9849682 9835323 9849682 + ENST00000247970.8@PIN1 ENST00000247970.8 protein_coding 9835323,9838436,9848030,9849090 9835402,9838648,9848140,9849682 Gene ID= ENSG00000127445.13 TPM= 176.58 Transcript Type= protein_coding chr19 9835341 9849682 9835341 9849682 + ENST00000588695.5@PIN1 ENST00000588695.5 protein_coding 9835341,9838436,9848030,9849090,9849533 9835402,9838648,9848140,9849201,9849682 Gene ID= ENSG00000127445.13 TPM= 1.81 Transcript Type= protein_coding chr19 9853718 9936552 9853718 9936552 - ENST00000264833.8@OLFM2 ENST00000264833.8 protein_coding 9936304,9860645,9857715,9857263,9856807,9853718 9936552,9860794,9857861,9857482,9856913,9854863 Gene ID= ENSG00000105088.8 TPM= 127.68 Transcript Type= protein_coding chr19 9959561 10010471 9959561 10010471 - ENST00000264828.3@COL5A3 ENST00000264828.3 protein_coding 10010298,10006073,10005796,10005558,10004041,10003565,10001768,10001524,9998102,9997984,9997371,9996615,9996433,9996206,9996066,9995564,9993753,9993619,9993380,9993023,9992827,9992004,9991788,9991610,9989469,9989322,9989124,9986714,9986553,9986315,9985842,9982065,9981088,9980806,9980648,9979994,9979839,9979364,9979132,9978891,9978574,9977594,9977365,9977229,9976558,9974301,9974171,9973919,9973756,9973570,9972919,9971205,9970975,9970622,9969869,9969575,9969349,9968675,9968385,9968026,9967904,9967347,9966536,9966314,9962819,9960651,9959561 10010471,10006231,10005985,10005714,10004145,10003714,10001881,10001670,9998149,9998025,9997433,9996689,9996516,9996262,9996119,9995617,9993806,9993672,9993433,9993067,9992880,9992048,9991841,9991654,9989522,9989366,9989177,9986758,9986606,9986422,9985895,9982118,9981132,9980859,9980692,9980047,9979892,9979417,9979239,9978980,9978627,9977701,9977472,9977282,9976611,9974408,9974224,9973972,9973809,9973623,9973026,9971258,9971028,9970675,9969922,9969682,9969402,9968728,9968492,9968079,9967939,9967400,9966746,9966426,9962887,9960890,9960557 Gene ID= ENSG00000080573.6 TPM= 2.72 Transcript Type= protein_coding chr19 10086130 10093245 10086130 10093245 + ENST00000253110.15@C19orf66 ENST00000253110.15 protein_coding 10086130,10086929,10087251,10089657,10089898,10091250,10091476,10092070 10086448,10087052,10087300,10089695,10090047,10091353,10091630,10093245 Gene ID= ENSG00000130813.17 TPM= 50.86 Transcript Type= protein_coding chr19 10086297 10093252 10086297 10093252 + ENST00000585919.5@C19orf66 ENST00000585919.5 protein_coding 10086297,10086929,10087251,10089657,10089898,10091250,10092070 10086448,10087052,10087300,10089695,10090047,10091630,10093252 Gene ID= ENSG00000130813.17 TPM= 16 Transcript Type= retained_intron chr19 10106329 10112011 10106329 10112011 + transcript1802.chr19.nic@PPAN transcript1802.chr19.nic protein_coding 10106329,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945 10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110791,10112011 Gene ID= ENSG00000130810.19 TPM= 3.17 Transcript Type= NA chr19 10106289 10111294 10106289 10111294 + ENST00000253107.11@PPAN ENST00000253107.11 protein_coding 10106289,10106501,10107505,10107804,10107964,10109631,10109913,10110123,10110324,10110485,10110697,10110945 10106412,10106671,10107606,10107854,10108134,10109707,10110020,10110246,10110402,10110614,10110866,10111294 Gene ID= ENSG00000130810.19 TPM= 42.11 Transcript Type= protein_coding chr19 10115017 10119902 10115017 10119902 - ENST00000253108.8@EIF3G ENST00000253108.8 protein_coding 10119840,10119654,10119088,10118868,10118668,10117084,10116800,10115967,10115684,10115479,10115017 10119902,10119700,10119171,10118956,10118727,10117188,10116989,10116074,10115820,10115585,10115129 Gene ID= ENSG00000130811.11 TPM= 162.55 Transcript Type= protein_coding chr19 10133346 10195135 10133346 10195135 - ENST00000340748.8@DNMT1 ENST00000340748.8 protein_coding 10194820,10182041,10180778,10180350,10177292,10175540,10173871,10173090,10168330,10166598,10163326,10162667,10160384,10160018,10159842,10159658,10156391,10155853,10154905,10154586,10154293,10151750,10151398,10149853,10149453,10148884,10146351,10143766,10142028,10141105,10140781,10140046,10139676,10138439,10137832,10137085,10136121,10135736,10134217,10133346 10195135,10182077,10180885,10180569,10177367,10175618,10173905,10173174,10168364,10166685,10163360,10162748,10160418,10160063,10159922,10159767,10156509,10155945,10155056,10154773,10154479,10151847,10151545,10149968,10149657,10149017,10146524,10143987,10142220,10141189,10140909,10140328,10139817,10138605,10138009,10137280,10136287,10135852,10134307,10133701 Gene ID= ENSG00000130816.14 TPM= 7.24 Transcript Type= protein_coding chr19 10251951 10260058 10251951 10260058 + transcript1824.chr19.nic@MRPL4 transcript1824.chr19.nic protein_coding 10251951,10252397,10252551,10254589,10256708,10258222,10258413,10259617 10252310,10252463,10252701,10254640,10256825,10258328,10258685,10260058 Gene ID= ENSG00000105364.13 TPM= 5.43 Transcript Type= NA chr19 10251967 10260045 10251967 10260045 + ENST00000253099.10@MRPL4 ENST00000253099.10 protein_coding 10251967,10252397,10252551,10254589,10256708,10258222,10258413,10258609,10259617 10252310,10252463,10252701,10254640,10256825,10258328,10258522,10258685,10260045 Gene ID= ENSG00000105364.13 TPM= 145.79 Transcript Type= protein_coding chr19 10251964 10260043 10251964 10260043 + ENST00000307422.9@MRPL4 ENST00000307422.9 protein_coding 10251964,10252146,10252397,10252551,10254589,10256708,10258222,10258413,10258609,10259617 10252009,10252310,10252463,10252701,10254640,10256825,10258328,10258522,10258685,10260043 Gene ID= ENSG00000105364.13 TPM= 18.11 Transcript Type= protein_coding chr19 10291443 10296776 10291443 10296776 + transcript1831.chr19.nic@ICAM5 transcript1831.chr19.nic protein_coding 10291443,10292035,10292612,10292998,10293698,10294040,10294401,10295346 10291809,10292322,10292866,10293246,10293943,10294318,10294640,10296776 Gene ID= ENSG00000105376.4 TPM= 1.81 Transcript Type= NA chr19 10316215 10333534 10316215 10333534 - transcript1832.chr19.nic@RAVER1 transcript1832.chr19.nic protein_coding 10333289,10330460,10328642,10323375,10323145,10322645,10321531,10321048,10320858,10320655,10319166,10318229,10317690,10316215 10333534,10330526,10329111,10323566,10323274,10322739,10321618,10321259,10320951,10320782,10319240,10318372,10317773,10317600 Gene ID= ENSG00000161847.13 TPM= 11.77 Transcript Type= NA chr19 10333436 10336248 10333436 10336248 + ENST00000612689.1@AC114271.1 ENST00000612689.1 antisense_RNA 10333436 10336248 Gene ID= ENSG00000274425.1 TPM= 4.23 Transcript Type= antisense_RNA chr19 10333776 10339823 10333776 10339823 - ENST00000160262.9@ICAM3 ENST00000160262.9 protein_coding 10339539,10338682,10335671,10335066,10334528,10334160,10333776 10339823,10338948,10335976,10335353,10334782,10334408,10334059 Gene ID= ENSG00000076662.9 TPM= 3.32 Transcript Type= protein_coding chr19 10333776 10339661 10333776 10339661 - ENST00000587992.1@ICAM3 ENST00000587992.1 protein_coding 10339539,10338682,10334160,10333776 10339661,10338948,10335976,10334059 Gene ID= ENSG00000076662.9 TPM= 3.32 Transcript Type= retained_intron chr19 10350521 10380577 10350521 10380577 - transcript1853.chr19.nic@TYK2 transcript1853.chr19.nic protein_coding 10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10354042,10353528,10352926,10352434,10351052,10350521 10380577,10379689,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353646,10353098,10352551,10351162,10350968 Gene ID= ENSG00000105397.13 TPM= 14.64 Transcript Type= NA chr19 10350521 10380615 10350521 10380615 - transcript1863.chr19.nic@TYK2 transcript1863.chr19.nic protein_coding 10380380,10379615,10378214,10368295,10368055,10366417,10365517,10364851,10364614,10362549,10362264,10362078,10361770,10361511,10359175,10358003,10357764,10356568,10354512,10353528,10352926,10352434,10351052,10350521 10380615,10379779,10378426,10368418,10368202,10366580,10365898,10365048,10364771,10362657,10362456,10362181,10361955,10361598,10359302,10358138,10357918,10356718,10354609,10354234,10353098,10352551,10351162,10350968 Gene ID= ENSG00000105397.13 TPM= 18.11 Transcript Type= NA chr19 10391134 10403533 10391134 10403533 - ENST00000222005.6@CDC37 ENST00000222005.6 protein_coding 10403378,10395928,10395435,10395228,10395021,10393259,10393086,10391134 10403533,10396203,10395543,10395343,10395143,10393441,10393157,10391706 Gene ID= ENSG00000105401.8 TPM= 237.25 Transcript Type= protein_coding chr19 10461516 10469631 10461516 10469631 + transcript1884.chr19.nic@PDE4A transcript1884.chr19.nic protein_coding 10461516,10461877,10463793,10466887 10461680,10461999,10463975,10469631 Gene ID= ENSG00000065989.15 TPM= 7.24 Transcript Type= NA chr19 10486126 10502896 10486126 10502896 - ENST00000393623.6@KEAP1 ENST00000393623.6 protein_coding 10502697,10499395,10491577,10489648,10489192,10486126 10502896,10500080,10492262,10489853,10489368,10486818 Gene ID= ENSG00000079999.13 TPM= 155.2 Transcript Type= protein_coding chr19 10543892 10553423 10543892 10553423 + transcript1906.chr19.nic@ATG4D transcript1906.chr19.nic protein_coding 10543892,10544783,10544957,10546839,10548904,10551897,10552045,10552205,10552885 10544325,10544866,10545130,10547253,10549034,10551975,10552121,10552324,10553423 Gene ID= ENSG00000130734.9 TPM= 2.04 Transcript Type= NA chr19 10543892 10553423 10543892 10553423 + transcript1910.chr19.nic@ATG4D transcript1910.chr19.nic protein_coding 10543892,10544783,10544957,10548904,10551897,10552045,10552205,10552885 10544325,10544866,10545130,10549034,10551975,10552121,10552324,10553423 Gene ID= ENSG00000130734.9 TPM= 9.28 Transcript Type= NA chr19 10543892 10553423 10543892 10553423 + transcript1912.chr19.nic@ATG4D transcript1912.chr19.nic protein_coding 10543892,10544783,10544957,10551897,10552045,10552205,10552885 10544325,10544866,10545130,10551975,10552121,10552324,10553423 Gene ID= ENSG00000130734.9 TPM= 2.04 Transcript Type= NA chr19 10543918 10553418 10543918 10553418 + ENST00000309469.8@ATG4D ENST00000309469.8 protein_coding 10543918,10544783,10544957,10546839,10547189,10548904,10551897,10552045,10552205,10552885 10544325,10544866,10545130,10547115,10547253,10549034,10551975,10552121,10552324,10553418 Gene ID= ENSG00000130734.9 TPM= 42.79 Transcript Type= protein_coding chr19 10553078 10566037 10553078 10566037 - ENST00000312962.10@KRI1 ENST00000312962.10 protein_coding 10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557769,10557552,10555285,10555087,10553078 10566037,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10557682,10555349,10555185,10554281 Gene ID= ENSG00000129347.19 TPM= 27.17 Transcript Type= protein_coding chr19 10553576 10565971 10553576 10565971 - ENST00000478863.5@KRI1 ENST00000478863.5 protein_coding 10565906,10565717,10564929,10562729,10561791,10561667,10561169,10561003,10560312,10559810,10559613,10559359,10558164,10557972,10557552,10555285,10555087,10553576 10565971,10565790,10565034,10562837,10561845,10561716,10561265,10561080,10560448,10559936,10559708,10559529,10558239,10558060,10557895,10555349,10555185,10554281 Gene ID= ENSG00000129347.19 TPM= 3.62 Transcript Type= retained_intron chr19 10566462 10568978 10566462 10568978 - ENST00000393599.2@CDKN2D ENST00000393599.2 protein_coding 10568513,10566462 10568978,10567417 Gene ID= ENSG00000129355.6 TPM= 24.45 Transcript Type= protein_coding chr19 10625258 10644559 10625258 10644559 + ENST00000335757.9@SLC44A2 ENST00000335757.9 protein_coding 10625258,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279 10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644559 Gene ID= ENSG00000129353.14 TPM= 22.28 Transcript Type= protein_coding chr19 10602423 10644559 10602423 10644559 + transcript1922.chr19.nic@SLC44A2 transcript1922.chr19.nic protein_coding 10602423,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279 10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644559 Gene ID= ENSG00000129353.14 TPM= 13.22 Transcript Type= NA chr19 10602510 10644550 10602510 10644550 + ENST00000407327.8@SLC44A2 ENST00000407327.8 protein_coding 10602510,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10643279 10602561,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644550 Gene ID= ENSG00000129353.14 TPM= 81.14 Transcript Type= protein_coding chr19 10625525 10644557 10625525 10644557 + ENST00000586078.5@SLC44A2 ENST00000586078.5 protein_coding 10625525,10626253,10627722,10627920,10631057,10631275,10631475,10631626,10631868,10632044,10634756,10634974,10635163,10635431,10636323,10636662,10637644,10637856,10638023,10638227,10642367,10642897 10625670,10626301,10627795,10628004,10631141,10631385,10631535,10631749,10631951,10632156,10634887,10635073,10635255,10635515,10636585,10636756,10637747,10637929,10638093,10638315,10642451,10644557 Gene ID= ENSG00000129353.14 TPM= 4.17 Transcript Type= protein_coding chr19 10654261 10692417 10654261 10692417 + ENST00000449870.5@ILF3 ENST00000449870.5 protein_coding 10654261,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10687346,10688550,10689179 10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10687708,10688678,10692417 Gene ID= ENSG00000129351.17 TPM= 51.62 Transcript Type= protein_coding chr19 10654328 10685765 10654328 10685765 + ENST00000407004.7@ILF3 ENST00000407004.7 protein_coding 10654328,10670516,10670974,10671358,10677163,10678613,10679097,10679816,10680346,10681019,10681219,10681993,10682537,10683125,10683366,10683636,10683917,10684416 10654487,10670608,10671203,10671535,10677310,10678704,10679192,10679927,10680443,10681130,10681329,10682192,10682704,10683262,10683542,10683789,10683970,10685765 Gene ID= ENSG00000129351.17 TPM= 27.17 Transcript Type= protein_coding chr19 10701430 10713366 10701430 10713366 + transcript1938.chr19.nic@QTRT1 transcript1938.chr19.nic protein_coding 10701430,10701950,10702116,10707302,10707466,10712161,10712758,10712953,10713118 10701703,10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713366 Gene ID= ENSG00000213339.8 TPM= 1.81 Transcript Type= NA chr19 10701430 10713366 10701430 10713366 + transcript1943.chr19.nic@QTRT1 transcript1943.chr19.nic protein_coding 10701430,10701950,10707302,10707500,10712161,10712758,10712953,10713118 10701703,10702254,10707380,10707615,10712628,10712867,10713040,10713366 Gene ID= ENSG00000213339.8 TPM= 2.72 Transcript Type= NA chr19 10701442 10713366 10701442 10713366 + transcript1944.chr19.nic@QTRT1 transcript1944.chr19.nic protein_coding 10701442,10702116,10707302,10707500,10712161,10712758,10712953,10713118 10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713366 Gene ID= ENSG00000213339.8 TPM= 2.72 Transcript Type= NA chr19 10701442 10713366 10701442 10713366 + transcript1945.chr19.nic@QTRT1 transcript1945.chr19.nic protein_coding 10701442,10702116,10707302,10707500,10712161,10712953,10713118 10702018,10702254,10707380,10707615,10712867,10713040,10713366 Gene ID= ENSG00000213339.8 TPM= 1.81 Transcript Type= NA chr19 10701430 10713345 10701430 10713345 + ENST00000589488.5@QTRT1 ENST00000589488.5 protein_coding 10701430,10701950,10702116,10707302,10707500,10712161,10712758,10712953,10713118 10701703,10702018,10702254,10707380,10707615,10712628,10712867,10713040,10713345 Gene ID= ENSG00000213339.8 TPM= 23.54 Transcript Type= retained_intron chr19 10701451 10713365 10701451 10713365 + ENST00000250237.9@QTRT1 ENST00000250237.9 protein_coding 10701451,10701950,10702116,10707302,10707500,10712161,10712553,10712758,10712953,10713118 10701703,10702018,10702254,10707380,10707615,10712299,10712628,10712867,10713040,10713365 Gene ID= ENSG00000213339.8 TPM= 39.84 Transcript Type= protein_coding chr19 10717975 10834204 10717975 10834204 + transcript1955.chr19.nic@DNM2 transcript1955.chr19.nic protein_coding 10717975,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10832304 10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10834204 Gene ID= ENSG00000079805.16 TPM= 16.75 Transcript Type= NA chr19 10718093 10831884 10718093 10831884 + ENST00000359692.10@DNM2 ENST00000359692.10 protein_coding 10718093,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10812264,10819980,10823788,10825057,10829036,10830127,10830978 10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10812377,10820089,10823899,10825221,10829268,10830378,10831884 Gene ID= ENSG00000079805.16 TPM= 86.15 Transcript Type= protein_coding chr19 10718131 10831903 10718131 10831903 + ENST00000389253.8@DNM2 ENST00000389253.8 protein_coding 10718131,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10797380,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978 10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10797518,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831903 Gene ID= ENSG00000079805.16 TPM= 259.36 Transcript Type= protein_coding chr19 10718163 10831895 10718163 10831895 + ENST00000355667.10@DNM2 ENST00000355667.10 protein_coding 10718163,10759738,10772479,10775703,10777118,10782960,10786564,10793720,10795372,10796061,10798486,10802288,10805916,10808569,10812264,10819980,10823788,10825057,10829036,10830127,10830978 10718403,10759811,10772628,10775906,10777216,10783120,10786706,10793855,10795439,10796199,10798572,10802358,10805967,10808580,10812377,10820089,10823899,10825221,10829268,10830378,10831895 Gene ID= ENSG00000079805.16 TPM= 9.25 Transcript Type= protein_coding chr19 10832445 10836212 10832445 10836212 - transcript1981.chr19.nnic@TMED1 transcript1981.chr19.nnic protein_coding 10836009,10835256,10834934,10832951,10832445 10836212,10835353,10835117,10833213,10832839 Gene ID= ENSG00000099203.6 TPM= 1.81 Transcript Type= NA chr19 10832437 10835609 10832437 10835609 - transcript1983.chr19.nnic@TMED1 transcript1983.chr19.nnic protein_coding 10835579,10835256,10834934,10832437 10835609,10835353,10835117,10833213 Gene ID= ENSG00000099203.6 TPM= 1.81 Transcript Type= NA chr19 10832438 10836290 10832438 10836290 - ENST00000214869.6@TMED1 ENST00000214869.6 protein_coding 10836009,10835256,10834934,10832438 10836290,10835353,10835117,10833213 Gene ID= ENSG00000099203.6 TPM= 77.88 Transcript Type= protein_coding chr19 10871564 10923069 10871564 10923069 + transcript1988.chr19.nnic@CARM1 transcript1988.chr19.nnic protein_coding 10871564,10871612,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921375,10921615 10871572,10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10921443,10923069 Gene ID= ENSG00000142453.11 TPM= 4.53 Transcript Type= NA chr19 10871564 10923093 10871564 10923093 + transcript1993.chr19.nnic@CARM1 transcript1993.chr19.nnic protein_coding 10871564,10871612,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921615 10871572,10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10923093 Gene ID= ENSG00000142453.11 TPM= 32.6 Transcript Type= NA chr19 10871513 10923070 10871513 10923070 + ENST00000327064.8@CARM1 ENST00000327064.8 protein_coding 10871513,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921375,10921615 10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10921443,10923070 Gene ID= ENSG00000142453.11 TPM= 24.45 Transcript Type= protein_coding chr19 10871703 10922721 10871703 10922721 + ENST00000344150.8@CARM1 ENST00000344150.8 protein_coding 10871703,10904951,10908039,10909103,10912184,10913877,10916407,10916696,10919595,10919877,10920436,10920659,10920834,10921050,10921615 10871922,10905076,10908145,10909207,10912294,10914054,10916497,10916777,10919680,10919966,10920573,10920748,10920946,10921127,10922721 Gene ID= ENSG00000142453.11 TPM= 14.13 Transcript Type= protein_coding chr19 10922217 10928715 10922217 10928715 - transcript2007.chr19.nic@YIPF2 transcript2007.chr19.nic protein_coding 10928585,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922217 10928715,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923191 Gene ID= ENSG00000130733.10 TPM= 5.07 Transcript Type= NA chr19 10922185 10928681 10922185 10928681 - ENST00000253031.6@YIPF2 ENST00000253031.6 protein_coding 10928585,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922185 10928681,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174 Gene ID= ENSG00000130733.10 TPM= 66.87 Transcript Type= protein_coding chr19 10922768 10928653 10922768 10928653 - ENST00000586748.5@YIPF2 ENST00000586748.5 protein_coding 10928511,10928380,10927799,10927630,10925686,10924076,10923833,10923495,10923272,10922768 10928653,10928440,10927959,10927716,10925773,10924192,10923999,10923677,10923407,10923174 Gene ID= ENSG00000130733.10 TPM= 8.38 Transcript Type= protein_coding chr19 10928733 10930254 10928733 10930254 + ENST00000270502.6@TIMM29 ENST00000270502.6 protein_coding 10928733,10929014 10928916,10930254 Gene ID= ENSG00000142444.6 TPM= 29.88 Transcript Type= protein_coding chr19 10961008 11062278 10961008 11062278 + transcript2020.chr19.nic@SMARCA4 transcript2020.chr19.nic protein_coding 10961008,10965307,10984124,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11034123,11034914,11041298,11058258,11058788,11059753,11060045,11061784 10961174,10965309,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062278 Gene ID= ENSG00000127616.17 TPM= 4.98 Transcript Type= NA chr19 10960870 11062278 10960870 11062278 + transcript2024.chr19.nic@SMARCA4 transcript2024.chr19.nic protein_coding 10960870,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11034123,11034914,11041298,11058255,11058788,11059753,11060045,11061784 10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062278 Gene ID= ENSG00000127616.17 TPM= 14.49 Transcript Type= NA chr19 10961001 11062059 10961001 11062059 + ENST00000344626.8@SMARCA4 ENST00000344626.8 protein_coding 10961001,10984121,10985273,10986189,10986905,10987666,10989317,10991150,10994828,10996213,10996494,11003029,11003340,11007902,11010381,11012949,11018957,11019591,11021725,11023518,11024331,11025422,11026300,11027784,11030730,11033290,11033767,11034123,11034914,11041307,11058255,11058788,11059753,11060045,11061784 10961174,10984373,10985405,10986593,10987003,10987924,10989443,10991323,10995001,10996380,10996544,11003159,11003397,11008023,11010531,11013112,11019023,11019701,11021967,11023631,11024438,11025508,11026346,11027950,11030893,11033517,11033865,11034200,11035132,11041560,11058363,11058889,11059885,11060187,11062059 Gene ID= ENSG00000127616.17 TPM= 7.7 Transcript Type= protein_coding chr19 11089413 11133827 11089413 11133827 + transcript2037.chr19.nnic@LDLR transcript2037.chr19.nnic protein_coding 11089413,11100223,11102664,11105220,11106565,11107392,11110652,11111514,11113278,11113535,11116094,11116859,11120092,11120370,11123174,11129513,11131281 11089615,11100345,11102786,11105600,11106687,11107514,11110771,11111639,11113449,11113762,11116212,11116998,11120233,11120522,11123344,11129670,11133827 Gene ID= ENSG00000130164.13 TPM= 14.04 Transcript Type= NA chr19 11164268 11197547 11164268 11197547 - transcript2056.chr19.nic@KANK2 transcript2056.chr19.nic protein_coding 11197485,11196050,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164268 11197547,11196227,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611 Gene ID= ENSG00000197256.10 TPM= 3.95 Transcript Type= NA chr19 11164268 11197567 11164268 11197567 - transcript2061.chr19.nic@KANK2 transcript2061.chr19.nic protein_coding 11197485,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164268 11197567,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611 Gene ID= ENSG00000197256.10 TPM= 32.02 Transcript Type= NA chr19 11164268 11197879 11164268 11197879 - transcript2062.chr19.nnic@KANK2 transcript2062.chr19.nnic protein_coding 11197707,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164268 11197879,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611 Gene ID= ENSG00000197256.10 TPM= 5.76 Transcript Type= NA chr19 11164268 11197530 11164268 11197530 - transcript2063.chr19.nic@KANK2 transcript2063.chr19.nic protein_coding 11197485,11195556,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164268 11197530,11195881,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611 Gene ID= ENSG00000197256.10 TPM= 6.66 Transcript Type= NA chr19 11164268 11197735 11164268 11197735 - transcript2069.chr19.nnic@KANK2 transcript2069.chr19.nnic protein_coding 11197485,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164268 11197735,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611 Gene ID= ENSG00000197256.10 TPM= 11.87 Transcript Type= NA chr19 11164267 11197521 11164267 11197521 - ENST00000586659.5@KANK2 ENST00000586659.5 protein_coding 11197485,11195622,11194475,11192831,11178553,11178345,11176578,11175902,11174473,11172981,11170048,11169877,11164267 11197521,11195820,11194590,11194042,11178720,11178447,11176817,11175989,11174692,11173123,11170248,11169966,11166611 Gene ID= ENSG00000197256.10 TPM= 32.7 Transcript Type= protein_coding chr19 11322046 11339668 11322046 11339668 - ENST00000222120.7@RAB3D ENST00000222120.7 protein_coding 11339469,11337172,11335665,11335447,11322046 11339668,11337460,11335783,11335571,11325585 Gene ID= ENSG00000105514.7 TPM= 33.51 Transcript Type= protein_coding chr19 11342776 11346305 11342776 11346305 - ENST00000447337.5@TMEM205 ENST00000447337.5 protein_coding 11346008,11345520,11345252,11342776 11346305,11345628,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 3.57 Transcript Type= protein_coding chr19 11342779 11346406 11342779 11346406 - ENST00000587948.5@TMEM205 ENST00000587948.5 protein_coding 11346334,11345520,11345252,11342779 11346406,11345628,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 1.76 Transcript Type= protein_coding chr19 11342778 11346285 11342778 11346285 - ENST00000586956.5@TMEM205 ENST00000586956.5 protein_coding 11346008,11345520,11345252,11342778 11346285,11345737,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 2.21 Transcript Type= protein_coding chr19 11342775 11346311 11342775 11346311 - transcript2138.chr19.nnic@TMEM205 transcript2138.chr19.nnic protein_coding 11346127,11345540,11345252,11342775 11346311,11345628,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 8.86 Transcript Type= NA chr19 11342778 11346268 11342778 11346268 - ENST00000586590.5@TMEM205 ENST00000586590.5 protein_coding 11346208,11345520,11345252,11342778 11346268,11345628,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 14.43 Transcript Type= protein_coding chr19 11342776 11346300 11342776 11346300 - ENST00000593256.6@TMEM205 ENST00000593256.6 protein_coding 11346127,11345520,11345252,11342776 11346300,11345628,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 128.53 Transcript Type= protein_coding chr19 11342785 11346248 11342785 11346248 - ENST00000588560.5@TMEM205 ENST00000588560.5 protein_coding 11346127,11345520,11345252,11342785 11346248,11345737,11345415,11343120 Gene ID= ENSG00000105518.13 TPM= 23.04 Transcript Type= protein_coding chr19 11342810 11346256 11342810 11346256 - ENST00000588321.1@TMEM205 ENST00000588321.1 protein_coding 11345238,11342810 11346256,11343100 Gene ID= ENSG00000105518.13 TPM= 5.43 Transcript Type= retained_intron chr19 11346518 11354943 11346518 11354943 + transcript2111.chr19.nic@CCDC159 transcript2111.chr19.nic protein_coding 11346518,11349654,11349938,11350118,11350808,11351906,11352057,11353451,11353792,11354580 11346627,11349687,11350026,11350199,11351003,11351973,11352133,11353572,11353874,11354943 Gene ID= ENSG00000183401.11 TPM= 2.72 Transcript Type= NA chr19 11346518 11354949 11346518 11354949 + transcript2112.chr19.nic@CCDC159 transcript2112.chr19.nic protein_coding 11346518,11349654,11349938,11350118,11350808,11351906,11352057,11353451,11354580,11354873 11346627,11349687,11350026,11350199,11351003,11351973,11352133,11353874,11354696,11354949 Gene ID= ENSG00000183401.11 TPM= 3.62 Transcript Type= NA chr19 11355418 11365696 11355418 11365696 + transcript2115.chr19.nic@PLPPR2 transcript2115.chr19.nic protein_coding 11355418,11356802,11357619,11359532,11359821,11361217,11362513,11363713,11364161,11364347 11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363819,11364212,11365696 Gene ID= ENSG00000105520.10 TPM= 7.85 Transcript Type= NA chr19 11355386 11365698 11355386 11365698 + ENST00000251473.9@PLPPR2 ENST00000251473.9 protein_coding 11355386,11356802,11357660,11359532,11359821,11361217,11362513,11363713,11364161,11364347 11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363819,11364212,11365698 Gene ID= ENSG00000105520.10 TPM= 42.26 Transcript Type= protein_coding chr19 11355418 11365696 11355418 11365696 + transcript2121.chr19.nic@PLPPR2 transcript2121.chr19.nic protein_coding 11355418,11356802,11357660,11359607,11359821,11361217,11362513,11363713,11364161,11364347 11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363819,11364212,11365696 Gene ID= ENSG00000105520.10 TPM= 10.57 Transcript Type= NA chr19 11355498 11365694 11355498 11365694 + ENST00000591608.1@PLPPR2 ENST00000591608.1 protein_coding 11355498,11356802,11357660,11359607,11359821,11361217,11362513,11363713,11364161,11364347 11355572,11356976,11357739,11359720,11359956,11361488,11362689,11363835,11364212,11365694 Gene ID= ENSG00000105520.10 TPM= 12.68 Transcript Type= protein_coding chr19 11374685 11376951 11374685 11376951 + ENST00000312423.2@SWSAP1 ENST00000312423.2 protein_coding 11374685,11375513 11374929,11376951 Gene ID= ENSG00000173928.2 TPM= 6.34 Transcript Type= protein_coding chr19 11377206 11381223 11377206 11381223 - transcript2144.chr19.nic@EPOR transcript2144.chr19.nic protein_coding 11380884,11378691,11377206 11381223,11378778,11378595 Gene ID= ENSG00000187266.13 TPM= 3.62 Transcript Type= NA chr19 11377205 11384312 11377205 11384312 - ENST00000222139.10@EPOR ENST00000222139.10 protein_coding 11384093,11383097,11381930,11381692,11381056,11380884,11378691,11377205 11384312,11383232,11382105,11381849,11381209,11380971,11378778,11378595 Gene ID= ENSG00000187266.13 TPM= 47.54 Transcript Type= protein_coding chr19 11377763 11384342 11377763 11384342 - ENST00000588681.5@EPOR ENST00000588681.5 protein_coding 11384093,11382847,11381930,11381692,11381056,11380884,11378691,11377763 11384342,11383232,11382105,11381849,11381209,11380971,11378778,11378595 Gene ID= ENSG00000187266.13 TPM= 2.26 Transcript Type= retained_intron chr19 11394057 11419342 11394057 11419342 - ENST00000380456.7@RGL3 ENST00000380456.7 protein_coding 11419246,11418671,11416836,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402455,11402215,11402011,11400202,11400040,11399855,11397445,11397244,11394057 11419342,11418784,11417059,11416667,11416148,11406864,11406634,11405426,11405231,11402706,11402541,11402247,11402132,11400297,11400108,11399951,11397597,11397358,11394520 Gene ID= ENSG00000205517.12 TPM= 2.94 Transcript Type= protein_coding chr19 11394056 11419341 11394056 11419341 - transcript2088.chr19.nic@RGL3 transcript2088.chr19.nic protein_coding 11419246,11418671,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402455,11402215,11402011,11400202,11400040,11399855,11397445,11397244,11394056 11419341,11418784,11417059,11416148,11406864,11406634,11405426,11405231,11402706,11402541,11402247,11402132,11400297,11400108,11399951,11397597,11397358,11394520 Gene ID= ENSG00000205517.12 TPM= 2.04 Transcript Type= NA chr19 11396187 11419341 11396187 11419341 - transcript2089.chr19.nic@RGL3 transcript2089.chr19.nic protein_coding 11419246,11418671,11416836,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402455,11402215,11402011,11400202,11400040,11399855,11397445,11396187 11419341,11418784,11417059,11416667,11416148,11406864,11406634,11405426,11405231,11402706,11402541,11402247,11402132,11400297,11400108,11399951,11397597,11397358 Gene ID= ENSG00000205517.12 TPM= 2.72 Transcript Type= NA chr19 11394056 11419341 11394056 11419341 - transcript2091.chr19.nic@RGL3 transcript2091.chr19.nic protein_coding 11419246,11418671,11416836,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402011,11400202,11400040,11399855,11397445,11397244,11394056 11419341,11418784,11417059,11416667,11416148,11406864,11406634,11405426,11405231,11402706,11402541,11400297,11400108,11399951,11397597,11397358,11394520 Gene ID= ENSG00000205517.12 TPM= 2.04 Transcript Type= NA chr19 11394056 11419341 11394056 11419341 - transcript2092.chr19.nnic@RGL3 transcript2092.chr19.nnic protein_coding 11419246,11418671,11416836,11416614,11415937,11406722,11406419,11405323,11405147,11402650,11402215,11402011,11400202,11400040,11397445,11397244,11394056 11419341,11418784,11417059,11416667,11416148,11406864,11406634,11405426,11405231,11402706,11402247,11402132,11400297,11400108,11397597,11397358,11394520 Gene ID= ENSG00000205517.12 TPM= 2.04 Transcript Type= NA chr19 11420603 11421836 11420603 11421836 - transcript2146.chr19.nnic@CCDC151 transcript2146.chr19.nnic protein_coding 11421637,11421128,11420603 11421836,11421212,11420947 Gene ID= ENSG00000198003.11 TPM= 3.17 Transcript Type= NA chr19 11420603 11421856 11420603 11421856 - transcript2147.chr19.nic@CCDC151 transcript2147.chr19.nic protein_coding 11421677,11421128,11420603 11421856,11421212,11420947 Gene ID= ENSG00000198003.11 TPM= 4.07 Transcript Type= NA chr19 11435612 11450968 11435612 11450968 + transcript2149.chr19.nic@PRKCSH transcript2149.chr19.nic protein_coding 11435612,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646 11435706,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447597,11447789,11448291,11448629,11448988,11449175,11449428,11450968 Gene ID= ENSG00000130175.9 TPM= 73.2 Transcript Type= NA chr19 11435635 11450968 11435635 11450968 + ENST00000592741.5@PRKCSH ENST00000592741.5 protein_coding 11435635,11436041,11436389,11437876,11438067,11441240,11442386,11445389,11446272,11447074,11447439,11447693,11448222,11448540,11448914,11449076,11449266,11450646 11435710,11436196,11436505,11437971,11438124,11441357,11442515,11445473,11446350,11447160,11447618,11447789,11448291,11448629,11448988,11449175,11449428,11450968 Gene ID= ENSG00000130175.9 TPM= 71.99 Transcript Type= protein_coding chr19 11483427 11505923 11483427 11505923 - ENST00000293771.9@ZNF653 ENST00000293771.9 protein_coding 11505488,11498296,11495950,11487292,11486987,11486769,11485656,11484042,11483427 11505923,11498339,11496165,11487903,11487158,11486880,11485770,11484141,11483859 Gene ID= ENSG00000161914.9 TPM= 9.06 Transcript Type= protein_coding chr19 11483430 11505804 11483430 11505804 - transcript2173.chr19.nic@ZNF653 transcript2173.chr19.nic protein_coding 11505488,11498296,11495950,11486987,11486769,11485656,11483430 11505804,11498339,11496165,11487903,11486880,11485770,11484141 Gene ID= ENSG00000161914.9 TPM= 1.81 Transcript Type= NA chr19 11505917 11528865 11505917 11528865 - transcript2178.chr19.nic@ECSIT transcript2178.chr19.nic protein_coding 11528745,11519075,11513804,11513056,11507991,11507702,11507457,11505917 11528865,11519193,11514221,11513279,11508048,11507850,11507562,11506428 Gene ID= ENSG00000130159.13 TPM= 3.92 Transcript Type= NA chr19 11505917 11529147 11505917 11529147 - transcript2181.chr19.nic@ECSIT transcript2181.chr19.nic protein_coding 11529062,11513804,11513056,11507991,11507702,11507457,11505917 11529147,11514221,11513279,11508048,11507850,11507562,11506428 Gene ID= ENSG00000130159.13 TPM= 4.83 Transcript Type= NA chr19 11505916 11529174 11505916 11529174 - ENST00000270517.11@ECSIT ENST00000270517.11 protein_coding 11529062,11519075,11513804,11513056,11507991,11507702,11507457,11505916 11529174,11519193,11514221,11513279,11508048,11507850,11507562,11506428 Gene ID= ENSG00000130159.13 TPM= 87.23 Transcript Type= protein_coding chr19 11538717 11550323 11538717 11550323 + ENST00000252456.6@CNN1 ENST00000252456.6 protein_coding 11538717,11541076,11546675,11546832,11547797,11549323,11549550 11538990,11541197,11546741,11546969,11547907,11549469,11550323 Gene ID= ENSG00000130176.7 TPM= 28.07 Transcript Type= protein_coding chr19 11553030 11559243 11553030 11559243 - transcript2188.chr19.nnic@ELOF1 transcript2188.chr19.nnic protein_coding 11559191,11555174,11554232,11554011,11553030 11559243,11555253,11554365,11554081,11553810 Gene ID= ENSG00000130165.10 TPM= 14.49 Transcript Type= NA chr19 11553043 11559236 11553043 11559236 - ENST00000252445.7@ELOF1 ENST00000252445.7 protein_coding 11559191,11554232,11554011,11553043 11559236,11554365,11554081,11553810 Gene ID= ENSG00000130165.10 TPM= 42.56 Transcript Type= protein_coding chr19 11597420 11619135 11597420 11619135 + ENST00000361113.9@ZNF627 ENST00000361113.9 protein_coding 11597420,11614527,11614827,11616695 11597630,11614653,11614887,11619135 Gene ID= ENSG00000198551.9 TPM= 18.11 Transcript Type= protein_coding chr19 11574660 11578985 11574660 11578985 - ENST00000218758.9@ACP5 ENST00000218758.9 protein_coding 11578844,11578585,11577593,11577057,11576716,11576243,11574660 11578985,11578657,11577679,11577317,11576843,11576588,11575252 Gene ID= ENSG00000102575.10 TPM= 6.34 Transcript Type= protein_coding chr19 11574691 11578986 11574691 11578986 - ENST00000412435.6@ACP5 ENST00000412435.6 protein_coding 11578844,11577593,11577057,11576716,11576243,11574691 11578986,11577679,11577317,11576843,11576588,11575252 Gene ID= ENSG00000102575.10 TPM= 1.81 Transcript Type= protein_coding chr19 11721265 11738973 11721265 11738973 - ENST00000341191.10@ZNF823 ENST00000341191.10 protein_coding 11738817,11725201,11724194,11721265 11738973,11725327,11724254,11723342 Gene ID= ENSG00000197933.12 TPM= 3.62 Transcript Type= protein_coding chr19 11767092 11784078 11767092 11784078 + ENST00000357901.4@ZNF441 ENST00000357901.4 protein_coding 11767092,11777611,11778330,11780019 11767196,11777737,11778393,11784078 Gene ID= ENSG00000197044.10 TPM= 3.62 Transcript Type= protein_coding chr19 11848750 11869484 11848750 11869484 + transcript2207.chr19.nnic@ZNF439 transcript2207.chr19.nnic protein_coding 11848750,11866205,11866537,11867306 11848930,11866331,11866597,11869484 Gene ID= ENSG00000171291.8 TPM= 2.72 Transcript Type= NA chr19 11987671 12003811 11987671 12003811 + ENST00000489336.5@AC008770.1 ENST00000489336.5 processed_transcript 11987671,12001774,12003392 11987823,12001822,12003811 Gene ID= ENSG00000219665.8 TPM= 4.53 Transcript Type= antisense_RNA chr19 12014758 12035710 12014758 12035710 - ENST00000344980.10@ZNF433 ENST00000344980.10 protein_coding 12035537,12018166,12017876,12014758 12035710,12018301,12017936,12016666 Gene ID= ENSG00000197647.11 TPM= 1.81 Transcript Type= protein_coding chr19 12014732 12035688 12014732 12035688 - ENST00000419886.6@ZNF433 ENST00000419886.6 protein_coding 12035537,12034828,12018166,12017876,12014732 12035688,12034874,12018292,12017936,12016666 Gene ID= ENSG00000197647.11 TPM= 1.81 Transcript Type= protein_coding chr19 12092239 12114676 12092239 12114676 + transcript2220.chr19.nnic@ZNF788 transcript2220.chr19.nnic protein_coding 12092239,12110305,12110634,12111246 12092470,12110431,12110694,12114676 Gene ID= ENSG00000214189.8 TPM= 5.43 Transcript Type= NA chr19 12131350 12140407 12131350 12140407 - ENST00000334213.9@ZNF20 ENST00000334213.9 protein_coding 12140180,12135769,12135500,12131350 12140407,12135904,12135560,12133985 Gene ID= ENSG00000132010.15 TPM= 5.43 Transcript Type= protein_coding chr19 12163064 12189881 12163064 12189881 + ENST00000343979.5@ZNF136 ENST00000343979.5 protein_coding 12163064,12185785,12186114,12186570 12163206,12185911,12186174,12189881 Gene ID= ENSG00000196646.11 TPM= 20.83 Transcript Type= protein_coding chr19 12271812 12294813 12271812 12294813 - ENST00000356109.9@ZNF44 ENST00000356109.9 protein_coding 12294692,12293232,12275956,12274973,12271812 12294813,12293375,12276082,12275033,12274063 Gene ID= ENSG00000197857.13 TPM= 1.81 Transcript Type= protein_coding chr19 12243133 12294882 12243133 12294882 - transcript2231.chr19.nnic@ZNF44 transcript2231.chr19.nnic protein_coding 12294692,12250242,12249978,12243133 12294882,12250368,12250038,12248678 Gene ID= ENSG00000197857.13 TPM= 2.72 Transcript Type= NA chr19 12271812 12294883 12271812 12294883 - transcript2232.chr19.nnic@ZNF44 transcript2232.chr19.nnic protein_coding 12294692,12275956,12274966,12271812 12294883,12276082,12275033,12274063 Gene ID= ENSG00000197857.13 TPM= 3.62 Transcript Type= NA chr19 12317477 12333688 12317477 12333688 - ENST00000293725.9@ZNF563 ENST00000293725.9 protein_coding 12333480,12322585,12321272,12317477 12333688,12322711,12321332,12319833 Gene ID= ENSG00000188868.13 TPM= 5.43 Transcript Type= protein_coding chr19 12349381 12365648 12349381 12365648 - transcript2239.chr19.nic@ZNF442 transcript2239.chr19.nic protein_coding 12365533,12352988,12352010,12349381 12365648,12353114,12352070,12351318 Gene ID= ENSG00000198342.9 TPM= 1.81 Transcript Type= NA chr19 12390016 12401271 12390016 12401271 - ENST00000430385.3@ZNF799 ENST00000430385.3 protein_coding 12401068,12393297,12392603,12390016 12401271,12393423,12392663,12392206 Gene ID= ENSG00000196466.10 TPM= 8.15 Transcript Type= protein_coding chr19 12429707 12440881 12429707 12440881 - transcript2241.chr19.nnic@ZNF443 transcript2241.chr19.nnic protein_coding 12440166,12433071,12432377,12429707 12440881,12433197,12432437,12431980 Gene ID= ENSG00000180855.15 TPM= 3.17 Transcript Type= NA chr19 12429707 12441112 12429707 12441112 - ENST00000301547.9@ZNF443 ENST00000301547.9 protein_coding 12440912,12433071,12432377,12429707 12441112,12433197,12432437,12431980 Gene ID= ENSG00000180855.15 TPM= 3.17 Transcript Type= protein_coding chr19 12461184 12484829 12461184 12484829 - ENST00000397732.7@ZNF709 ENST00000397732.7 protein_coding 12484655,12466724,12466462,12461184 12484829,12466850,12466519,12465733 Gene ID= ENSG00000242852.6 TPM= 7.24 Transcript Type= protein_coding chr19 12525370 12551529 12525370 12551529 - ENST00000339282.11@ZNF564 ENST00000339282.11 protein_coding 12551330,12528570,12528304,12525370 12551529,12528696,12528364,12527916 Gene ID= ENSG00000249709.7 TPM= 18.11 Transcript Type= protein_coding chr19 12610918 12631921 12610918 12631921 + ENST00000343325.8@ZNF791 ENST00000343325.8 protein_coding 12610918,12623700,12624650,12627721 12611082,12623826,12624710,12631921 Gene ID= ENSG00000173875.13 TPM= 7.24 Transcript Type= protein_coding chr19 12646500 12666758 12646500 12666758 - transcript2257.chr19.nic@MAN2B1 transcript2257.chr19.nic protein_coding 12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646500 12666758,12665805,12665525,12664985,12663835,12663462,12661376,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732 Gene ID= ENSG00000104774.12 TPM= 9.21 Transcript Type= NA chr19 12646513 12666742 12646513 12666742 - ENST00000456935.6@MAN2B1 ENST00000456935.6 protein_coding 12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658428,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646513 12666742,12665805,12665525,12664985,12663835,12663462,12661376,12658510,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732 Gene ID= ENSG00000104774.12 TPM= 174.92 Transcript Type= protein_coding chr19 12646516 12666734 12646516 12666734 - ENST00000221363.8@MAN2B1 ENST00000221363.8 protein_coding 12666543,12665703,12665352,12664792,12663703,12663317,12661260,12658428,12658224,12658063,12657446,12656949,12656571,12655694,12652363,12652153,12650104,12649913,12649341,12649136,12648175,12647443,12647233,12646516 12666734,12665805,12665525,12664985,12663835,12663462,12661376,12658507,12658344,12658141,12657555,12657056,12656687,12655879,12652460,12652270,12650222,12650014,12649428,12649216,12648402,12647598,12647335,12646732 Gene ID= ENSG00000104774.12 TPM= 4.23 Transcript Type= protein_coding chr19 12666800 12675832 12666800 12675832 + ENST00000418543.7@WDR83 ENST00000418543.7 protein_coding 12666800,12668508,12669755,12669977,12670180,12670563,12670695,12672847,12673008,12673202,12675523 12666992,12668627,12669893,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675832 Gene ID= ENSG00000123154.11 TPM= 10.71 Transcript Type= protein_coding chr19 12666807 12675831 12666807 12675831 + transcript2264.chr19.nic@WDR83 transcript2264.chr19.nic protein_coding 12666807,12668508,12669755,12670180,12670563,12670711,12672847,12673008,12673202,12675523 12666992,12668627,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675831 Gene ID= ENSG00000123154.11 TPM= 3.02 Transcript Type= NA chr19 12669714 12675831 12669714 12675831 + transcript2266.chr19.nic@WDR83 transcript2266.chr19.nic protein_coding 12669714,12669977,12670180,12670563,12670695,12672847,12673008,12673202,12675523 12669893,12670097,12670285,12670611,12670821,12672914,12673116,12673316,12675831 Gene ID= ENSG00000123154.11 TPM= 8 Transcript Type= NA chr19 12666802 12675791 12666802 12675791 + ENST00000546754.5@WDR83 ENST00000546754.5 protein_coding 12666802,12668508,12669755,12670180,12670563,12670695,12672847,12673008,12673202,12675523 12666992,12668627,12670080,12670285,12670611,12670821,12672914,12673116,12673316,12675791 Gene ID= ENSG00000123154.11 TPM= 3.62 Transcript Type= retained_intron chr19 12668075 12669403 12668075 12669403 - ENST00000222190.9@WDR83OS ENST00000222190.9 protein_coding 12669354,12669128,12668520,12668075 12669403,12669233,12668611,12668425 Gene ID= ENSG00000105583.9 TPM= 1.81 Transcript Type= protein_coding chr19 12675721 12681902 12675721 12681902 - ENST00000210060.11@DHPS ENST00000210060.11 protein_coding 12681560,12680161,12679801,12679623,12679457,12677291,12677108,12676017,12675721 12681902,12680325,12679922,12679719,12679543,12677396,12677211,12676142,12675933 Gene ID= ENSG00000095059.15 TPM= 95.99 Transcript Type= protein_coding chr19 12675762 12681860 12675762 12681860 - ENST00000601537.5@DHPS ENST00000601537.5 protein_coding 12681560,12680161,12679801,12679623,12679457,12677291,12676017,12675762 12681860,12680325,12679922,12679719,12679543,12677396,12676142,12675933 Gene ID= ENSG00000095059.15 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr19 12688917 12696643 12688917 12696643 - ENST00000393261.7@FBXW9 ENST00000393261.7 protein_coding 12696173,12694799,12694594,12691342,12691166,12689962,12689761,12689541,12689372,12688917 12696643,12694938,12694722,12691454,12691257,12690110,12689874,12689630,12689437,12689290 Gene ID= ENSG00000132004.12 TPM= 37.13 Transcript Type= protein_coding chr19 12699201 12722355 12699201 12722355 - ENST00000356861.9@TNPO2 ENST00000356861.9 protein_coding 12722134,12720879,12719261,12719029,12715633,12715405,12715243,12715047,12714821,12711553,12711296,12710621,12706570,12706196,12705682,12705492,12705240,12703714,12703428,12702823,12702072,12701752,12701598,12701326,12699201 12722355,12720990,12719336,12719178,12715739,12715538,12715324,12715169,12714939,12711613,12711461,12710773,12706795,12706367,12705768,12705599,12705398,12703801,12703526,12702918,12702147,12701851,12701672,12701453,12701243 Gene ID= ENSG00000105576.15 TPM= 11.77 Transcript Type= protein_coding chr19 12700736 12722562 12700736 12722562 - transcript2282.chr19.nnic@TNPO2 transcript2282.chr19.nnic protein_coding 12722477,12720879,12719261,12719029,12715633,12715405,12715243,12715047,12714821,12711553,12711296,12710621,12706570,12706196,12705682,12705492,12705240,12703714,12703428,12702823,12702072,12701752,12701598,12701326,12700736 12722562,12720990,12719336,12719178,12715739,12715542,12715324,12715171,12714941,12711613,12711461,12710773,12706795,12706370,12705768,12705599,12705398,12703801,12703529,12702918,12702147,12701853,12701672,12701455,12701245 Gene ID= ENSG00000105576.15 TPM= 162.09 Transcript Type= NA chr19 12730640 12734775 12730640 12734775 - ENST00000242784.4@TRIR ENST00000242784.4 protein_coding 12734313,12731344,12730640 12734775,12731421,12731068 Gene ID= ENSG00000123144.10 TPM= 167.07 Transcript Type= protein_coding chr19 12730640 12734657 12730640 12734657 - ENST00000591254.1@TRIR ENST00000591254.1 protein_coding 12734313,12731344,12730640 12734657,12731557,12731068 Gene ID= ENSG00000123144.10 TPM= 6.79 Transcript Type= nonsense_mediated_decay chr19 12737139 12748323 12737139 12748323 + ENST00000591090.5@ASNA1 ENST00000591090.5 protein_coding 12737139,12737459,12738511,12745377,12745609,12747197,12747395,12747973 12737193,12737666,12738658,12745525,12745759,12747304,12747592,12748323 Gene ID= ENSG00000198356.11 TPM= 109.57 Transcript Type= protein_coding chr19 12763002 12775570 12763002 12775570 - transcript2297.chr19.nic@HOOK2 transcript2297.chr19.nic protein_coding 12775405,12774812,12774635,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763002 12775570,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431 Gene ID= ENSG00000095066.11 TPM= 3.41 Transcript Type= NA chr19 12763003 12778462 12763003 12778462 - transcript2298.chr19.nic@HOOK2 transcript2298.chr19.nic protein_coding 12778300,12774812,12774635,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763003 12778462,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431 Gene ID= ENSG00000095066.11 TPM= 2.51 Transcript Type= NA chr19 12762977 12775550 12762977 12775550 - transcript2299.chr19.nnic@HOOK2 transcript2299.chr19.nnic protein_coding 12775219,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12762977 12775550,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431 Gene ID= ENSG00000095066.11 TPM= 2.51 Transcript Type= NA chr19 12763002 12778462 12763002 12778462 - transcript2301.chr19.nic@HOOK2 transcript2301.chr19.nic protein_coding 12778300,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763002 12778462,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431 Gene ID= ENSG00000095066.11 TPM= 3.41 Transcript Type= NA chr19 12763004 12775620 12763004 12775620 - ENST00000264827.9@HOOK2 ENST00000264827.9 protein_coding 12775405,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763668,12763528,12763004 12775620,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763599,12763431 Gene ID= ENSG00000095066.11 TPM= 44.16 Transcript Type= protein_coding chr19 12763003 12775570 12763003 12775570 - transcript2305.chr19.nic@HOOK2 transcript2305.chr19.nic protein_coding 12775405,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12765927,12765690,12764999,12764814,12763528,12763003 12775570,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12765724,12765081,12764917,12763778,12763431 Gene ID= ENSG00000095066.11 TPM= 1.81 Transcript Type= NA chr19 12763003 12775570 12763003 12775570 - transcript2306.chr19.nic@HOOK2 transcript2306.chr19.nic protein_coding 12775405,12774812,12774669,12772994,12772780,12772613,12772190,12771397,12771159,12770932,12769881,12768013,12767816,12767395,12766103,12764999,12764814,12763668,12763528,12763003 12775570,12774897,12774741,12773044,12772912,12772680,12772252,12771477,12771319,12771072,12770082,12768123,12767903,12767464,12766240,12766014,12764917,12763778,12763599,12763431 Gene ID= ENSG00000095066.11 TPM= 2.87 Transcript Type= NA chr19 12791496 12793315 12791496 12793315 + ENST00000302754.5@JUNB ENST00000302754.5 protein_coding 12791496 12793315 Gene ID= ENSG00000171223.5 TPM= 1474.23 Transcript Type= protein_coding chr19 12796820 12801859 12796820 12801859 - ENST00000301522.2@PRDX2 ENST00000301522.2 protein_coding 12801740,12801159,12800916,12800177,12799859,12796820 12801859,12801270,12801069,12800299,12799989,12797166 Gene ID= ENSG00000167815.11 TPM= 1679.79 Transcript Type= protein_coding chr19 12796823 12801789 12796823 12801789 - ENST00000466174.5@PRDX2 ENST00000466174.5 protein_coding 12801740,12801159,12799859,12796823 12801789,12801270,12801069,12797166 Gene ID= ENSG00000167815.11 TPM= 1.81 Transcript Type= retained_intron chr19 12796820 12801787 12796820 12801787 - ENST00000334482.9@PRDX2 ENST00000334482.9 protein_coding 12801740,12801159,12800916,12800177,12796820 12801787,12801270,12801069,12800299,12797166 Gene ID= ENSG00000167815.11 TPM= 34.41 Transcript Type= protein_coding chr19 12796823 12801849 12796823 12801849 + ENST00000585496.1@AC018761.2 ENST00000585496.1 antisense_RNA 12796823,12801754 12797022,12801849 Gene ID= ENSG00000267062.1 TPM= 6.34 Transcript Type= antisense_RNA chr19 12806580 12813637 12806580 12813637 + ENST00000221486.4@RNASEH2A ENST00000221486.4 protein_coding 12806580,12807008,12807206,12807419,12810071,12810317,12813083,12813328 12806800,12807079,12807329,12807506,12810208,12810404,12813206,12813637 Gene ID= ENSG00000104889.5 TPM= 12.68 Transcript Type= protein_coding chr19 12867736 12874956 12867736 12874956 + transcript2319.chr19.nic@MAST1 transcript2319.chr19.nic protein_coding 12867736,12868643,12869066,12870824,12871036,12873324,12873609 12867977,12868849,12869295,12870946,12871172,12873511,12874956 Gene ID= ENSG00000105613.9 TPM= 5.43 Transcript Type= NA chr19 12875211 12881468 12875211 12881468 - ENST00000222219.7@DNASE2 ENST00000222219.7 protein_coding 12881290,12880972,12880802,12878670,12878382,12875211 12881468,12881152,12880880,12878834,12878579,12876363 Gene ID= ENSG00000105612.8 TPM= 124.97 Transcript Type= protein_coding chr19 12891144 12899968 12891144 12899968 + transcript2332.chr19.nic@GCDH transcript2332.chr19.nic protein_coding 12891144,12891271,12891487,12892116,12893483,12895992,12896205,12896910,12897303,12897703,12899468 12891202,12891395,12891974,12892178,12893653,12896121,12896421,12897013,12897428,12897863,12899968 Gene ID= ENSG00000105607.12 TPM= 6.34 Transcript Type= NA chr19 12922480 12933738 12922480 12933738 - transcript2340.chr19.nic@FARSA transcript2340.chr19.nic protein_coding 12933550,12930612,12930429,12930223,12928755,12928342,12925090,12924904,12924639,12924449,12924151,12922480 12933738,12930749,12930527,12930341,12928847,12928663,12925174,12925003,12924807,12924526,12924265,12922886 Gene ID= ENSG00000179115.10 TPM= 5.73 Transcript Type= NA chr19 12922480 12933715 12922480 12933715 - ENST00000314606.8@FARSA ENST00000314606.8 protein_coding 12933550,12930612,12930429,12930223,12928755,12928535,12928342,12925090,12924904,12924639,12924449,12924151,12922480 12933715,12930749,12930527,12930341,12928847,12928663,12928457,12925174,12925003,12924807,12924526,12924265,12922886 Gene ID= ENSG00000179115.10 TPM= 149.26 Transcript Type= protein_coding chr19 12922480 12933714 12922480 12933714 - ENST00000423140.6@FARSA ENST00000423140.6 protein_coding 12933550,12930612,12930429,12930223,12928535,12928342,12925090,12924904,12924639,12924449,12924151,12922480 12933714,12930749,12930527,12930341,12928663,12928457,12925174,12925003,12924807,12924526,12924265,12922886 Gene ID= ENSG00000179115.10 TPM= 2.56 Transcript Type= protein_coding chr19 12938607 12944489 12938607 12944489 + ENST00000316448.9@CALR ENST00000316448.9 protein_coding 12938607,12939134,12939428,12940053,12940243,12940541,12940744,12943537,12943713 12938770,12939235,12939631,12940147,12940452,12940654,12940887,12943629,12944489 Gene ID= ENSG00000179218.13 TPM= 325.09 Transcript Type= protein_coding chr19 12945888 12953642 12945888 12953642 + ENST00000586534.5@RAD23A ENST00000586534.5 protein_coding 12945888,12947848,12948177,12948497,12948686,12949081,12949275,12952689,12952936 12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953642 Gene ID= ENSG00000179262.9 TPM= 116.82 Transcript Type= protein_coding chr19 12945876 12953623 12945876 12953623 + ENST00000316856.7@RAD23A ENST00000316856.7 protein_coding 12945876,12947848,12948177,12948497,12948686,12949081,12949278,12952689,12952936 12946020,12948009,12948358,12948552,12948813,12949159,12949408,12952853,12953623 Gene ID= ENSG00000179262.9 TPM= 6.34 Transcript Type= protein_coding chr19 12953119 12957236 12953119 12957236 - ENST00000316939.2@GADD45GIP1 ENST00000316939.2 protein_coding 12956863,12953119 12957236,12954526 Gene ID= ENSG00000179271.2 TPM= 193.79 Transcript Type= protein_coding chr19 12969482 12974762 12969482 12974762 + ENST00000317060.3@DAND5 ENST00000317060.3 protein_coding 12969482,12973389 12969984,12974762 Gene ID= ENSG00000179284.5 TPM= 2.72 Transcript Type= protein_coding chr19 13099030 13102900 13099030 13102900 - transcript2368.chr19.nnic@LYL1 transcript2368.chr19.nnic protein_coding 13102531,13100837,13100657,13099030 13102900,13101195,13100728,13099734 Gene ID= ENSG00000104903.4 TPM= 2.72 Transcript Type= NA chr19 13099030 13102899 13099030 13102899 - transcript2369.chr19.nic@LYL1 transcript2369.chr19.nic protein_coding 13102531,13100837,13100657,13099030 13102899,13101048,13100748,13099734 Gene ID= ENSG00000104903.4 TPM= 2.72 Transcript Type= NA chr19 13099033 13102867 13099033 13102867 - ENST00000264824.4@LYL1 ENST00000264824.4 protein_coding 13102531,13100837,13100657,13099033 13102867,13101195,13100748,13099734 Gene ID= ENSG00000104903.4 TPM= 18.11 Transcript Type= protein_coding chr19 13104902 13116748 13104902 13116748 - transcript2373.chr19.nic@TRMT1 transcript2373.chr19.nic protein_coding 13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105487,13105267,13104902 13116748,13116340,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105396,13105081 Gene ID= ENSG00000104907.12 TPM= 5.89 Transcript Type= NA chr19 13104902 13116749 13104902 13116749 - ENST00000357720.8@TRMT1 ENST00000357720.8 protein_coding 13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105487,13105267,13104902 13116749,13116431,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105396,13105081 Gene ID= ENSG00000104907.12 TPM= 35.77 Transcript Type= protein_coding chr19 13104907 13116740 13104907 13116740 - ENST00000593157.5@TRMT1 ENST00000593157.5 protein_coding 13116653,13116146,13115997,13115626,13115279,13112896,13112705,13110158,13109915,13109769,13109550,13109381,13107751,13107574,13105267,13104907 13116740,13116340,13116052,13115768,13115466,13113011,13112817,13110306,13110001,13109838,13109684,13109466,13107859,13107650,13105606,13105081 Gene ID= ENSG00000104907.12 TPM= 3.62 Transcript Type= retained_intron chr19 13118337 13141141 13118337 13141141 + ENST00000292431.4@NACC1 ENST00000292431.4 protein_coding 13118337,13135200,13136232,13137271,13137478,13138147 13118454,13136153,13136405,13137376,13137575,13141141 Gene ID= ENSG00000160877.5 TPM= 9.96 Transcript Type= protein_coding chr19 13144058 13150385 13144058 13150385 - transcript2383.chr19.nic@STX10 transcript2383.chr19.nic protein_coding 13149728,13149499,13149029,13145288,13144764,13144577,13144058 13150385,13149593,13149091,13145395,13144870,13144671,13144486 Gene ID= ENSG00000104915.14 TPM= 33.69 Transcript Type= NA chr19 13144059 13150385 13144059 13150385 - transcript2385.chr19.nic@STX10 transcript2385.chr19.nic protein_coding 13149728,13149499,13149029,13145288,13144764,13144059 13150385,13149593,13149091,13145395,13144870,13144671 Gene ID= ENSG00000104915.14 TPM= 4.71 Transcript Type= NA chr19 13144089 13150238 13144089 13150238 - ENST00000587230.5@STX10 ENST00000587230.5 protein_coding 13150139,13149728,13149499,13149029,13145288,13144764,13144577,13144089 13150238,13149897,13149593,13149091,13145395,13144870,13144671,13144486 Gene ID= ENSG00000104915.14 TPM= 32.6 Transcript Type= protein_coding chr19 13144062 13150226 13144062 13150226 - ENST00000589083.5@STX10 ENST00000589083.5 protein_coding 13150139,13149728,13149499,13149029,13145288,13144764,13144062 13150226,13149897,13149593,13149091,13145395,13144870,13144671 Gene ID= ENSG00000104915.14 TPM= 2.9 Transcript Type= protein_coding chr19 13150433 13154908 13150433 13154908 + ENST00000292433.3@IER2 ENST00000292433.3 protein_coding 13150433,13152944 13150552,13154908 Gene ID= ENSG00000160888.6 TPM= 177.49 Transcript Type= protein_coding chr19 13731752 13763298 13731752 13763298 + transcript2393.chr19.nic@CCDC130 transcript2393.chr19.nic protein_coding 13731752,13732175,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590 13731931,13732285,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763298 Gene ID= ENSG00000104957.13 TPM= 4.74 Transcript Type= NA chr19 13731757 13763298 13731757 13763298 + transcript2394.chr19.nic@CCDC130 transcript2394.chr19.nic protein_coding 13731757,13732175,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590 13732068,13732285,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763298 Gene ID= ENSG00000104957.13 TPM= 2.92 Transcript Type= NA chr19 13731760 13763296 13731760 13763296 + ENST00000586600.5@CCDC130 ENST00000586600.5 protein_coding 13731760,13732175,13751608,13754289,13756197,13757418,13757786,13758868,13759100,13762299,13762590 13731950,13732285,13751811,13754342,13756279,13757473,13757846,13759010,13759272,13762437,13763296 Gene ID= ENSG00000104957.13 TPM= 3.53 Transcript Type= protein_coding chr19 13731757 13763298 13731757 13763298 + transcript2398.chr19.nnic@CCDC130 transcript2398.chr19.nnic protein_coding 13731757,13732175,13751608,13754289,13756197,13757418,13757786,13758868,13762299,13762590 13732080,13732285,13751811,13754342,13756279,13757473,13757846,13759272,13762437,13763298 Gene ID= ENSG00000104957.13 TPM= 2.17 Transcript Type= NA chr19 13747864 13763279 13747864 13763279 + ENST00000593174.5@CCDC130 ENST00000593174.5 protein_coding 13747864,13751608,13754289,13756197,13757418,13757786,13758868,13762299,13762590 13747954,13751811,13754342,13756279,13757473,13757846,13759272,13762437,13763279 Gene ID= ENSG00000104957.13 TPM= 9.96 Transcript Type= retained_intron chr19 13764499 13774281 13764499 13774281 + transcript2419.chr19.nnic@MRI1 transcript2419.chr19.nnic protein_coding 13764499,13764871,13765954,13768561,13768824,13772121,13773377 13764720,13765109,13766129,13768737,13769048,13773260,13774281 Gene ID= ENSG00000037757.13 TPM= 3.62 Transcript Type= NA chr19 13764499 13774281 13764499 13774281 + transcript2420.chr19.nic@MRI1 transcript2420.chr19.nic protein_coding 13764499,13764871,13765954,13768359,13768824,13772121 13764720,13765109,13766129,13768737,13769048,13774281 Gene ID= ENSG00000037757.13 TPM= 8.15 Transcript Type= NA chr19 13764532 13774282 13764532 13774282 + ENST00000319545.12@MRI1 ENST00000319545.12 protein_coding 13764532,13764871,13768359,13768615,13768824,13772121 13764720,13765109,13768447,13768737,13769048,13774282 Gene ID= ENSG00000037757.13 TPM= 8.15 Transcript Type= protein_coding chr19 13774479 13778459 13774479 13778459 + ENST00000221576.4@C19orf53 ENST00000221576.4 protein_coding 13774479,13778052 13774574,13778459 Gene ID= ENSG00000104979.8 TPM= 5.43 Transcript Type= protein_coding chr19 13795406 13832231 13795406 13832231 + transcript2403.chr19.nic@ZSWIM4 transcript2403.chr19.nic protein_coding 13795406,13799720,13804792,13808836,13809070,13812997,13814515,13817216,13817722,13819357,13823346,13825550,13828645,13830191 13795801,13799921,13805148,13808984,13809220,13813164,13814865,13817353,13817976,13819492,13823500,13825713,13828726,13832231 Gene ID= ENSG00000132003.9 TPM= 9.06 Transcript Type= NA chr19 13906172 13930883 13906172 13930883 + transcript2432.chr19.nnic@CC2D1A transcript2432.chr19.nnic protein_coding 13906172,13909823,13912323,13912528,13913168,13913404,13918070,13918504,13918746,13918912,13919130,13919818,13920557,13920750,13923333,13923548,13923695,13926517,13926667,13926821,13926978,13927175,13927893,13928124,13929379,13929534,13930078,13930242,13930375 13906501,13909958,13912438,13912593,13913302,13913638,13918194,13918576,13918817,13919042,13919202,13919939,13920668,13920922,13923455,13923606,13923811,13926590,13926725,13926872,13927077,13927265,13928030,13928188,13929442,13929660,13930154,13930289,13930883 Gene ID= ENSG00000132024.17 TPM= 44.44 Transcript Type= NA chr19 13906172 13930883 13906172 13930883 + transcript2438.chr19.nnic@CC2D1A transcript2438.chr19.nnic protein_coding 13906172,13909823,13912323,13912528,13913168,13913437,13918070,13918504,13918746,13918912,13919130,13919818,13920557,13920750,13923333,13923548,13923695,13926517,13926667,13926821,13926978,13927175,13927893,13928124,13929379,13929534,13930078,13930242,13930375 13906501,13909958,13912438,13912593,13913302,13913638,13918194,13918576,13918817,13919042,13919202,13919951,13920668,13920922,13923455,13923606,13923811,13926590,13926725,13926872,13927077,13927265,13928030,13928188,13929442,13929660,13930154,13930289,13930883 Gene ID= ENSG00000132024.17 TPM= 6.41 Transcript Type= NA chr19 13952475 13961449 13952475 13961449 + transcript2448.chr19.nic@DCAF15 transcript2448.chr19.nic protein_coding 13952475,13954340,13954526,13956123,13956352,13959045,13959582,13959767,13959984,13960287,13960465,13960940 13952644,13954437,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960391,13960580,13961449 Gene ID= ENSG00000132017.10 TPM= 1.81 Transcript Type= NA chr19 13952492 13961449 13952492 13961449 + ENST00000254337.10@DCAF15 ENST00000254337.10 protein_coding 13952492,13954340,13954526,13955912,13956123,13956352,13959045,13959582,13959767,13959984,13960287,13960465,13960940 13952644,13954437,13954661,13956018,13956262,13956522,13959479,13959673,13959895,13960069,13960391,13960580,13961449 Gene ID= ENSG00000132017.10 TPM= 12.68 Transcript Type= protein_coding chr19 14031748 14053216 14031748 14053216 + ENST00000263379.3@IL27RA ENST00000263379.3 protein_coding 14031748,14032386,14039508,14039753,14042453,14042716,14046154,14046430,14048981,14049156,14050758,14051607,14051880,14052096 14031972,14032503,14039665,14039910,14042612,14042789,14046337,14046618,14049082,14049314,14050883,14051700,14051973,14053216 Gene ID= ENSG00000104998.3 TPM= 11.77 Transcript Type= protein_coding chr19 14072774 14075062 14072774 14075062 + ENST00000587086.2@MISP3 ENST00000587086.2 protein_coding 14072774,14074390,14074706 14073877,14074463,14075062 Gene ID= ENSG00000141854.9 TPM= 10.87 Transcript Type= protein_coding chr19 14087864 14091032 14087864 14091032 - transcript2462.chr19.nic@SAMD1 transcript2462.chr19.nic protein_coding 14090938,14089785,14089068,14088880,14088671,14087864 14091032,14090575,14089362,14088976,14088782,14088575 Gene ID= ENSG00000141858.11 TPM= 70.63 Transcript Type= NA chr19 14096057 14117760 14096057 14117760 - transcript2471.chr19.nic@PRKACA transcript2471.chr19.nic protein_coding 14117502,14107348,14106760,14102816,14100826,14097764,14097579,14096057 14117760,14107409,14106888,14102914,14100908,14097890,14097674,14097483 Gene ID= ENSG00000072062.13 TPM= 4.53 Transcript Type= NA chr19 14091688 14117744 14091688 14117744 - ENST00000308677.8@PRKACA ENST00000308677.8 protein_coding 14117502,14107348,14106760,14102816,14100826,14097764,14097579,14097361,14093628,14091688 14117744,14107409,14106888,14102914,14100908,14097890,14097674,14097483,14093792,14093237 Gene ID= ENSG00000072062.13 TPM= 56.14 Transcript Type= protein_coding chr19 14119509 14136956 14119509 14136956 - ENST00000263382.7@ASF1B ENST00000263382.7 protein_coding 14136348,14126122,14121532,14119509 14136956,14126237,14121708,14120665 Gene ID= ENSG00000105011.8 TPM= 3.62 Transcript Type= protein_coding chr19 14161579 14206858 14161579 14206858 - transcript2479.chr19.nic@ADGRL1 transcript2479.chr19.nic protein_coding 14205985,14183533,14177531,14170682,14161579 14206858,14183697,14177744,14170791,14163406 Gene ID= ENSG00000072071.16 TPM= 4.53 Transcript Type= NA chr19 14381435 14408725 14381435 14408725 + ENST00000357355.7@ADGRE5 ENST00000357355.7 protein_coding 14381435,14388450,14388702,14390924,14396342,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092 14381545,14388500,14388818,14391079,14396473,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408725 Gene ID= ENSG00000123146.19 TPM= 21.91 Transcript Type= protein_coding chr19 14381444 14408721 14381444 14408721 + ENST00000242786.5@ADGRE5 ENST00000242786.5 protein_coding 14381444,14388450,14388702,14390924,14396342,14397077,14397658,14397889,14398062,14401386,14401653,14402597,14404383,14405748,14406331,14406700,14406869,14407061,14407908,14408092 14381545,14388500,14388818,14391079,14396473,14397223,14397804,14397935,14398139,14401563,14401760,14402862,14404562,14405939,14406557,14406766,14406960,14407229,14408009,14408721 Gene ID= ENSG00000123146.19 TPM= 21.91 Transcript Type= protein_coding chr19 14408803 14419381 14408803 14419381 - transcript2502.chr19.nic@DDX39A transcript2502.chr19.nic protein_coding 14419270,14413013,14412551,14411506,14410989,14410421,14409742,14409536,14409303,14409037,14408803 14419381,14413224,14412678,14411598,14411172,14410605,14410334,14409645,14409447,14409184,14408952 Gene ID= ENSG00000123136.14 TPM= 7.24 Transcript Type= NA chr19 14408803 14419381 14408803 14419381 - transcript2503.chr19.nic@DDX39A transcript2503.chr19.nic protein_coding 14419270,14413013,14412551,14411506,14410989,14410548,14409742,14409536,14409303,14409037,14408803 14419381,14413224,14412678,14411598,14411172,14410605,14410334,14409645,14409447,14409184,14408952 Gene ID= ENSG00000123136.14 TPM= 5.43 Transcript Type= NA chr19 14408803 14419381 14408803 14419381 - transcript2507.chr19.nic@DDX39A transcript2507.chr19.nic protein_coding 14419270,14413013,14412551,14411506,14410989,14409742,14409536,14409303,14409037,14408803 14419381,14413224,14412678,14411598,14411172,14410334,14409645,14409447,14409184,14408952 Gene ID= ENSG00000123136.14 TPM= 3.62 Transcript Type= NA chr19 14408851 14419367 14408851 14419367 - ENST00000242776.8@DDX39A ENST00000242776.8 protein_coding 14419270,14413013,14412551,14411506,14410989,14410216,14409742,14409536,14409303,14409037,14408851 14419367,14413224,14412678,14411598,14411172,14410334,14409873,14409645,14409447,14409184,14408952 Gene ID= ENSG00000123136.14 TPM= 43.47 Transcript Type= protein_coding chr19 14408819 14419337 14408819 14419337 - ENST00000589318.5@DDX39A ENST00000589318.5 protein_coding 14419270,14413013,14412551,14411506,14410989,14409742,14409303,14409037,14408819 14419337,14413224,14412678,14411598,14411172,14410334,14409645,14409184,14408952 Gene ID= ENSG00000123136.14 TPM= 4.07 Transcript Type= retained_intron chr19 14433357 14471859 14433357 14471859 + ENST00000242783.10@PKN1 ENST00000242783.10 protein_coding 14433357,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581 14433542,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471859 Gene ID= ENSG00000123143.12 TPM= 329.32 Transcript Type= protein_coding chr19 14440260 14471866 14440260 14471866 + ENST00000342216.8@PKN1 ENST00000342216.8 protein_coding 14440260,14441143,14443470,14446426,14450318,14450896,14451829,14458031,14458232,14463667,14463828,14464060,14467565,14467718,14467876,14469341,14469752,14469912,14470163,14470575,14470771,14471581 14440329,14441443,14443621,14446561,14450463,14451109,14452023,14458140,14458375,14463742,14463969,14464153,14467641,14467793,14467967,14469517,14469814,14469988,14470305,14470682,14470851,14471866 Gene ID= ENSG00000123143.12 TPM= 15.1 Transcript Type= protein_coding chr19 14472466 14475362 14472466 14475362 - ENST00000292513.3@PTGER1 ENST00000292513.3 protein_coding 14475262,14473379,14472466 14475362,14474337,14472826 Gene ID= ENSG00000160951.3 TPM= 11.77 Transcript Type= protein_coding chr19 14477760 14496155 14477760 14496155 - transcript2552.chr19.nic@GIPC1 transcript2552.chr19.nic protein_coding 14496037,14492857,14491656,14480593,14480305,14479412,14478684,14477760 14496155,14492912,14491743,14480778,14480485,14479524,14478765,14478567 Gene ID= ENSG00000123159.15 TPM= 21.73 Transcript Type= NA chr19 14477762 14496132 14477762 14496132 - ENST00000393033.8@GIPC1 ENST00000393033.8 protein_coding 14496037,14492857,14491656,14482689,14480593,14480305,14479412,14478684,14477762 14496132,14492912,14491743,14483006,14480778,14480485,14479524,14478765,14478567 Gene ID= ENSG00000123159.15 TPM= 91.01 Transcript Type= protein_coding chr19 14477762 14496132 14477762 14496132 - ENST00000345425.6@GIPC1 ENST00000345425.6 protein_coding 14496037,14482689,14480593,14480305,14479412,14478684,14477762 14496132,14483006,14480778,14480485,14479524,14478765,14478567 Gene ID= ENSG00000123159.15 TPM= 6.79 Transcript Type= protein_coding chr19 14477760 14496149 14477760 14496149 - ENST00000393028.5@GIPC1 ENST00000393028.5 protein_coding 14496037,14480593,14480305,14479412,14478684,14477760 14496149,14480778,14480485,14479524,14478765,14478567 Gene ID= ENSG00000123159.15 TPM= 12.68 Transcript Type= protein_coding chr19 14514770 14518420 14514770 14518420 - ENST00000254322.2@DNAJB1 ENST00000254322.2 protein_coding 14518139,14516466,14514770 14518420,14517046,14516170 Gene ID= ENSG00000132002.7 TPM= 366.75 Transcript Type= protein_coding chr19 14529560 14565978 14529560 14565978 + ENST00000215567.9@TECR ENST00000215567.9 protein_coding 14529560,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744 14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565978 Gene ID= ENSG00000099797.13 TPM= 328.49 Transcript Type= protein_coding chr19 14529592 14565977 14529592 14565977 + ENST00000596073.5@TECR ENST00000596073.5 protein_coding 14529592,14562525,14563174,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744 14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977 Gene ID= ENSG00000099797.13 TPM= 25.13 Transcript Type= protein_coding chr19 14529595 14565977 14529595 14565977 + ENST00000598987.5@TECR ENST00000598987.5 protein_coding 14529595,14545114,14562525,14563206,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744 14529711,14545180,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565977 Gene ID= ENSG00000099797.13 TPM= 6.11 Transcript Type= nonsense_mediated_decay chr19 14529594 14565980 14529594 14565980 + ENST00000600083.5@TECR ENST00000600083.5 protein_coding 14529594,14562525,14563141,14563658,14563800,14563982,14564182,14564786,14564949,14565066,14565202,14565618,14565744 14529711,14562575,14563257,14563702,14563903,14564097,14564287,14564858,14564992,14565123,14565290,14565663,14565980 Gene ID= ENSG00000099797.13 TPM= 22.41 Transcript Type= protein_coding chr19 14566078 14572062 14566078 14572062 - ENST00000215565.2@NDUFB7 ENST00000215565.2 protein_coding 14571889,14566765,14566078 14572062,14566933,14566265 Gene ID= ENSG00000099795.6 TPM= 136.74 Transcript Type= protein_coding chr19 14690040 14720958 14690040 14720958 + transcript2591.chr19.nnic@ZNF333 transcript2591.chr19.nnic protein_coding 14690040,14693451,14695010,14695566,14699199,14701584,14705054,14706686,14715382,14716112,14716994,14717657,14718228 14690150,14693494,14695133,14695661,14699281,14701884,14705170,14706773,14715470,14716238,14717089,14717733,14720958 Gene ID= ENSG00000160961.11 TPM= 2.72 Transcript Type= NA chr19 14690040 14710778 14690040 14710778 + transcript2599.chr19.nnic@ZNF333 transcript2599.chr19.nnic protein_coding 14690040,14693451,14695010,14695566,14699199,14705054,14706686,14709582 14690150,14693494,14695133,14695661,14699281,14705170,14706773,14710778 Gene ID= ENSG00000160961.11 TPM= 1.81 Transcript Type= NA chr19 14690040 14709247 14690040 14709247 + transcript2600.chr19.nic@ZNF333 transcript2600.chr19.nic protein_coding 14690040,14693451,14695010,14695566,14699199,14705054,14706686 14690150,14693494,14695133,14695661,14699281,14705170,14709247 Gene ID= ENSG00000160961.11 TPM= 1.81 Transcript Type= NA chr19 15107403 15114988 15107403 15114988 + ENST00000342784.6@SYDE1 ENST00000342784.6 protein_coding 15107403,15109056,15109704,15110521,15111313,15111632,15112346,15113560 15107521,15109397,15110348,15110735,15111439,15111792,15112571,15114988 Gene ID= ENSG00000105137.12 TPM= 40.4 Transcript Type= protein_coding chr19 15107405 15114985 15107405 15114985 + ENST00000600440.5@SYDE1 ENST00000600440.5 protein_coding 15107405,15109257,15109704,15110521,15111313,15111632,15112346,15113560 15107521,15109397,15110348,15110735,15111439,15111792,15112571,15114985 Gene ID= ENSG00000105137.12 TPM= 9.61 Transcript Type= protein_coding chr19 15114708 15125670 15114708 15125670 - transcript2603.chr19.nic@ILVBL transcript2603.chr19.nic protein_coding 15125380,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114708 15125670,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430 Gene ID= ENSG00000105135.15 TPM= 30.89 Transcript Type= NA chr19 15114708 15125385 15114708 15125385 - transcript2610.chr19.nic@ILVBL transcript2610.chr19.nic protein_coding 15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114708 15125385,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430 Gene ID= ENSG00000105135.15 TPM= 29.98 Transcript Type= NA chr19 15114987 15125785 15114987 15125785 - ENST00000263383.7@ILVBL ENST00000263383.7 protein_coding 15125656,15124925,15123375,15123116,15122892,15122693,15119982,15119418,15119166,15117881,15116408,15116152,15116001,15115850,15115566,15114987 15125785,15125069,15123576,15123243,15123030,15122804,15120081,15119515,15119302,15118015,15116522,15116321,15116071,15115921,15115671,15115430 Gene ID= ENSG00000105135.15 TPM= 193.79 Transcript Type= protein_coding chr19 15235519 15280451 15235519 15280451 - ENST00000263377.6@BRD4 ENST00000263377.6 protein_coding 15280264,15272815,15268905,15267416,15265354,15264404,15263420,15256964,15256064,15255297,15254152,15244710,15244231,15242900,15239910,15239659,15239392,15239059,15238743,15235519 15280451,15273133,15269042,15267551,15265643,15264766,15263548,15257173,15256263,15255592,15254262,15244762,15244600,15243487,15240022,15239821,15239522,15239264,15238980,15238445 Gene ID= ENSG00000141867.17 TPM= 22.64 Transcript Type= protein_coding chr19 15353522 15379829 15353522 15379829 - transcript2639.chr19.nic@AKAP8 transcript2639.chr19.nic protein_coding 15379713,15376976,15374603,15373786,15372851,15372218,15371952,15370146,15369067,15368235,15362110,15361729,15360848,15358967,15353522 15379829,15377014,15374635,15374065,15373340,15372347,15371998,15370179,15369224,15368322,15362251,15361822,15360978,15359062,15355370 Gene ID= ENSG00000105127.8 TPM= 11.55 Transcript Type= NA chr19 15353522 15379315 15353522 15379315 - transcript2646.chr19.nic@AKAP8 transcript2646.chr19.nic protein_coding 15379026,15376976,15374603,15373786,15372851,15372218,15371952,15370146,15368235,15362110,15361729,15360848,15358967,15353522 15379315,15377014,15374635,15374065,15373340,15372347,15371998,15370179,15368322,15362251,15361822,15360978,15359062,15355370 Gene ID= ENSG00000105127.8 TPM= 6.57 Transcript Type= NA chr19 15331976 15364052 15331976 15364052 - transcript2689.chr19.nnic@AKAP8 transcript2689.chr19.nnic protein_coding 15362051,15344232,15331976 15364052,15344366,15332648 Gene ID= ENSG00000105127.8 TPM= 2.72 Transcript Type= NA chr19 15332594 15364108 15332594 15364108 - transcript2690.chr19.nnic@AKAP8 transcript2690.chr19.nnic protein_coding 15362188,15344232,15332594 15364108,15344366,15332648 Gene ID= ENSG00000105127.8 TPM= 2.72 Transcript Type= NA chr19 15380050 15419121 15380050 15419121 - ENST00000594594.6@AKAP8L ENST00000594594.6 protein_coding 15418911,15410520,15404010,15403653,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050 15419121,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 6.3 Transcript Type= nonsense_mediated_decay chr19 15380050 15419054 15380050 15419054 - transcript2642.chr19.nic@AKAP8L transcript2642.chr19.nic protein_coding 15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050 15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 21.7 Transcript Type= NA chr19 15380050 15419054 15380050 15419054 - transcript2644.chr19.nic@AKAP8L transcript2644.chr19.nic protein_coding 15418911,15410520,15404010,15403658,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380050 15419054,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 17.59 Transcript Type= NA chr19 15380048 15419054 15380048 15419054 - ENST00000397410.9@AKAP8L ENST00000397410.9 protein_coding 15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15399302,15397714,15397520,15397150,15380517,15380048 15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 91.84 Transcript Type= protein_coding chr19 15380050 15419054 15380050 15419054 - transcript2666.chr19.nic@AKAP8L transcript2666.chr19.nic protein_coding 15418911,15410520,15404010,15403475,15401150,15400947,15400794,15398630,15397714,15397520,15397150,15380517,15380050 15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 6.09 Transcript Type= NA chr19 15380050 15419054 15380050 15419054 - transcript2669.chr19.nic@AKAP8L transcript2669.chr19.nic protein_coding 15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15397714,15397520,15397150,15380517,15380050 15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 13.61 Transcript Type= NA chr19 15380050 15419054 15380050 15419054 - transcript2679.chr19.nic@AKAP8L transcript2679.chr19.nic protein_coding 15418911,15410520,15404010,15403475,15401150,15400947,15400794,15397714,15397520,15397150,15380517,15380050 15419054,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 15.57 Transcript Type= NA chr19 15380050 15419054 15380050 15419054 - transcript2682.chr19.nic@AKAP8L transcript2682.chr19.nic protein_coding 15418911,15410520,15404010,15401150,15400947,15400794,15397714,15397520,15397150,15380517,15380050 15419054,15410594,15404042,15403715,15401043,15400864,15400358,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 7.42 Transcript Type= NA chr19 15380051 15418988 15380051 15418988 - ENST00000593845.5@AKAP8L ENST00000593845.5 protein_coding 15418911,15410520,15404010,15403475,15401150,15400947,15400794,15400295,15398630,15397714,15397520,15397150,15380517,15380051 15418988,15410594,15404042,15403715,15401603,15401043,15400864,15400358,15399410,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 10.35 Transcript Type= retained_intron chr19 15380050 15418988 15380050 15418988 - ENST00000609519.5@AKAP8L ENST00000609519.5 protein_coding 15418911,15410520,15404010,15403658,15403475,15401150,15400947,15400794,15400295,15399302,15398630,15397714,15397520,15397150,15380517,15380050 15418988,15410594,15404042,15403715,15403555,15401603,15401043,15400864,15400358,15399410,15398766,15397855,15397625,15397280,15380612,15380430 Gene ID= ENSG00000011243.17 TPM= 3.59 Transcript Type= nonsense_mediated_decay chr19 15421544 15433308 15421544 15433308 - transcript2705.chr19.nic@WIZ transcript2705.chr19.nic protein_coding 15433165,15431012,15429586,15426982,15425241,15424613,15424183,15421544 15433308,15431182,15430089,15427533,15425768,15425032,15424378,15423235 Gene ID= ENSG00000011451.17 TPM= 9.96 Transcript Type= NA chr19 15421508 15431150 15421508 15431150 - ENST00000389282.8@WIZ ENST00000389282.8 protein_coding 15431012,15429586,15426982,15425241,15424613,15424183,15421508 15431150,15430089,15427533,15425768,15425032,15424378,15423235 Gene ID= ENSG00000011451.17 TPM= 9.06 Transcript Type= protein_coding chr19 15451624 15464571 15451624 15464571 - ENST00000343625.11@RASAL3 ENST00000343625.11 protein_coding 15464505,15464031,15461471,15461218,15461060,15460203,15458529,15458328,15457292,15456502,15456104,15454657,15454361,15454149,15453107,15452658,15452045,15451624 15464571,15464377,15461607,15461296,15461121,15460258,15458655,15458426,15457834,15456646,15456248,15454893,15454562,15454267,15453497,15452815,15452108,15451938 Gene ID= ENSG00000105122.12 TPM= 9.06 Transcript Type= protein_coding chr19 15672757 15697174 15672757 15697174 + ENST00000550308.5@CYP4F12 ENST00000550308.5 protein_coding 15672757,15673529,15678261,15680244,15680392,15682389,15683493,15684816,15685068,15695936,15696161,15696430,15696908 15673135,15673727,15678405,15680297,15680519,15682510,15683763,15684882,15685197,15696069,15696225,15696512,15697174 Gene ID= ENSG00000186204.14 TPM= 2.72 Transcript Type= protein_coding chr19 15912367 15934867 15912367 15934867 - ENST00000248041.12@CYP4F11 ENST00000248041.12 protein_coding 15934832,15934211,15929457,15927430,15927212,15924761,15923812,15922364,15922037,15914762,15914602,15914305,15912367 15934867,15934409,15929601,15927483,15927339,15924882,15924082,15922430,15922166,15914895,15914666,15914387,15913909 Gene ID= ENSG00000171903.16 TPM= 17.21 Transcript Type= protein_coding chr19 16076306 16103005 16076306 16103005 + ENST00000300933.8@TPM4 ENST00000300933.8 protein_coding 16076306,16081913,16086423,16088027,16089045,16093536,16093684,16101264 16076697,16082046,16086540,16088097,16089120,16093598,16093753,16103005 Gene ID= ENSG00000167460.14 TPM= 336.86 Transcript Type= protein_coding chr19 16111629 16134234 16111629 16134234 + ENST00000300935.7@RAB8A ENST00000300935.7 protein_coding 16111629,16118226,16121750,16125470,16127437,16128026,16129554,16132212 16112025,16118286,16121810,16125547,16127526,16128091,16129604,16134234 Gene ID= ENSG00000167461.11 TPM= 147.6 Transcript Type= protein_coding chr19 16185418 16192046 16185418 16192046 + ENST00000263384.11@FAM32A ENST00000263384.11 protein_coding 16185418,16185624,16190520,16190887 16185516,16185765,16190573,16192046 Gene ID= ENSG00000105058.11 TPM= 119.53 Transcript Type= protein_coding chr19 16197578 16245907 16197578 16245907 + ENST00000291439.7@AP1M1 ENST00000291439.7 protein_coding 16197578,16203459,16206341,16208019,16209030,16226421,16227548,16228137,16228770,16233493,16234199,16234413 16198068,16203615,16206408,16208149,16209177,16226547,16227690,16228208,16228928,16233618,16234274,16245907 Gene ID= ENSG00000072958.8 TPM= 126.32 Transcript Type= protein_coding chr19 16197934 16235345 16197934 16235345 + ENST00000444449.6@AP1M1 ENST00000444449.6 protein_coding 16197934,16203459,16206341,16208019,16209030,16210360,16226421,16227548,16228137,16228770,16233493,16234199,16234413 16198068,16203615,16206408,16208149,16209177,16210395,16226547,16227690,16228208,16228928,16233618,16234274,16235345 Gene ID= ENSG00000072958.8 TPM= 2.72 Transcript Type= protein_coding chr19 16355239 16472012 16355239 16472012 - ENST00000455140.6@EPS15L1 ENST00000455140.6 protein_coding 16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361779,16355239 16472012,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984,16355851 Gene ID= ENSG00000127527.13 TPM= 7.24 Transcript Type= protein_coding chr19 16355251 16471987 16355251 16471987 - transcript2740.chr19.nic@EPS15L1 transcript2740.chr19.nic protein_coding 16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361886,16355251 16471987,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984,16355851 Gene ID= ENSG00000127527.13 TPM= 2.72 Transcript Type= NA chr19 16361581 16472085 16361581 16472085 - ENST00000248070.10@EPS15L1 ENST00000248070.10 protein_coding 16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16377122,16361581 16472085,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16377254,16361984 Gene ID= ENSG00000127527.13 TPM= 9.96 Transcript Type= protein_coding chr19 16355248 16471987 16355248 16471987 - transcript2749.chr19.nnic@EPS15L1 transcript2749.chr19.nnic protein_coding 16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16402321,16395344,16393951,16392304,16386171,16385129,16355248 16471987,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485,16395467,16394001,16392440,16386231,16385211,16355851 Gene ID= ENSG00000127527.13 TPM= 3.62 Transcript Type= NA chr19 16400631 16471950 16400631 16471950 - ENST00000597937.5@EPS15L1 ENST00000597937.5 protein_coding 16471913,16442178,16441892,16440862,16437770,16436937,16434365,16428702,16425083,16421319,16417948,16417552,16413773,16404588,16403733,16400631 16471950,16442219,16441981,16440909,16437865,16436999,16434490,16428761,16425316,16421476,16418104,16417637,16413845,16404749,16403930,16402485 Gene ID= ENSG00000127527.13 TPM= 4.53 Transcript Type= protein_coding chr19 16496311 16521350 16496311 16521350 + ENST00000221671.7@C19orf44 ENST00000221671.7 protein_coding 16496311,16500792,16503065,16506701,16509499,16513014,16514497,16517230,16520094 16496465,16501551,16503380,16506774,16509988,16513109,16514663,16517341,16521350 Gene ID= ENSG00000105072.8 TPM= 2.72 Transcript Type= protein_coding chr19 16517889 16542530 16517889 16542530 - ENST00000546361.6@CHERP ENST00000546361.6 protein_coding 16542354,16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517889 16542530,16542043,16535636,16533148,16532749,16530880,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352 Gene ID= ENSG00000085872.14 TPM= 23.09 Transcript Type= protein_coding chr19 16517892 16542162 16517892 16542162 - transcript2762.chr19.nic@CHERP transcript2762.chr19.nic protein_coding 16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517892 16542162,16535636,16533148,16532749,16530880,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352 Gene ID= ENSG00000085872.14 TPM= 10.41 Transcript Type= NA chr19 16517896 16542415 16517896 16542415 - ENST00000198939.6@CHERP ENST00000198939.6 protein_coding 16542354,16541870,16535452,16533011,16532598,16530769,16530585,16529648,16528080,16525242,16523052,16521521,16520826,16520364,16520149,16519621,16517896 16542415,16542043,16535636,16533148,16532749,16530913,16530674,16529900,16528255,16525677,16523290,16521654,16520912,16520507,16520265,16519715,16519352 Gene ID= ENSG00000085872.14 TPM= 6.34 Transcript Type= protein_coding chr19 16549955 16572436 16549955 16572436 - transcript2768.chr19.nnic@SLC35E1 transcript2768.chr19.nnic protein_coding 16571944,16571512,16568032,16566532,16555152,16552640,16549955 16572436,16571582,16568169,16566657,16555397,16553909,16550470 Gene ID= ENSG00000127526.14 TPM= 1.81 Transcript Type= NA chr19 16550857 16572436 16550857 16572436 - transcript2774.chr19.nic@SLC35E1 transcript2774.chr19.nic protein_coding 16571944,16571512,16566532,16550857 16572436,16571582,16566657,16553909 Gene ID= ENSG00000127526.14 TPM= 3.62 Transcript Type= NA chr19 16549831 16572382 16549831 16572382 - ENST00000595753.5@SLC35E1 ENST00000595753.5 protein_coding 16571944,16571512,16568032,16566532,16555152,16549831 16572382,16571582,16568169,16566657,16555397,16553909 Gene ID= ENSG00000127526.14 TPM= 63.39 Transcript Type= protein_coding chr19 16572614 16578938 16572614 16578938 + transcript2775.chr19.nnic@AC008764.8 transcript2775.chr19.nnic antisense_RNA 16572614,16578166,16578358 16572808,16578273,16578938 Gene ID= ENSG00000279529.1 TPM= 1.81 Transcript Type= NA chr19 16574919 16628206 16574919 16628206 - ENST00000263390.7@MED26 ENST00000263390.7 protein_coding 16627872,16578335,16574919 16628206,16578409,16577682 Gene ID= ENSG00000105085.10 TPM= 20.83 Transcript Type= protein_coding chr19 16646588 16660144 16646588 16660144 - ENST00000602194.5@SMIM7 ENST00000602194.5 protein_coding 16660085,16659959,16659395,16647096,16646588 16660144,16660000,16659447,16647261,16646800 Gene ID= ENSG00000214046.8 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr19 16652356 16660142 16652356 16660142 - ENST00000358726.6@SMIM7 ENST00000358726.6 protein_coding 16660085,16659959,16659395,16654035,16652356 16660142,16660000,16659447,16654125,16652961 Gene ID= ENSG00000214046.8 TPM= 1.81 Transcript Type= protein_coding chr19 16661127 16690029 16661127 16690029 + ENST00000187762.6@TMEM38A ENST00000187762.6 protein_coding 16661127,16679984,16680397,16682421,16686288,16688144 16661341,16680140,16680581,16682508,16686405,16690029 Gene ID= ENSG00000072954.6 TPM= 27.17 Transcript Type= protein_coding chr19 16829386 16880353 16829386 16880353 + transcript2796.chr19.nic@SIN3B transcript2796.chr19.nic protein_coding 16829386,16829791,16831494,16841768,16846970,16851412,16853069,16854143,16862352,16865410,16866373,16869460,16871229,16876055,16876486,16877545,16878183,16878497 16829540,16829897,16831647,16841968,16847113,16851534,16853158,16854261,16863796,16865648,16866556,16870075,16871398,16876228,16876578,16877639,16878390,16880353 Gene ID= ENSG00000127511.9 TPM= 8.6 Transcript Type= NA chr19 16829400 16880350 16829400 16880350 + ENST00000248054.9@SIN3B ENST00000248054.9 protein_coding 16829400,16829791,16831494,16841768,16846970,16851412,16853069,16854143,16862352,16863680,16865410,16866373,16869460,16871229,16876055,16876486,16877545,16878183,16878497 16829540,16829897,16831647,16841968,16847113,16851534,16853158,16854261,16862559,16863796,16865648,16866556,16870075,16871398,16876228,16876578,16877639,16878390,16880350 Gene ID= ENSG00000127511.9 TPM= 25.81 Transcript Type= protein_coding chr19 16892958 16896941 16892958 16896941 - ENST00000596224.5@CPAMD8 ENST00000596224.5 protein_coding 16896456,16896176,16892958 16896941,16896326,16894437 Gene ID= ENSG00000160111.12 TPM= 3.62 Transcript Type= retained_intron chr19 17049729 17075613 17049729 17075613 - ENST00000253669.9@HAUS8 ENST00000253669.9 protein_coding 17075394,17073274,17069031,17062698,17059997,17059557,17058811,17058549,17055861,17052825,17049729 17075613,17073335,17069086,17062779,17060092,17059651,17058876,17058707,17056002,17052966,17050176 Gene ID= ENSG00000131351.14 TPM= 6.34 Transcript Type= protein_coding chr19 17215359 17219829 17215359 17219829 + ENST00000263897.9@USE1 ENST00000263897.9 protein_coding 17215359,17215802,17215992,17216169,17217453,17218364,17219213,17219631 17215507,17215851,17216070,17216321,17217462,17218391,17219387,17219829 Gene ID= ENSG00000053501.12 TPM= 31.69 Transcript Type= protein_coding chr19 17226205 17229218 17226205 17229218 + transcript2830.chr19.nic@OCEL1 transcript2830.chr19.nic protein_coding 17226205,17226693,17226994,17227840,17228256,17229009 17226353,17226869,17227199,17228005,17228309,17229218 Gene ID= ENSG00000099330.8 TPM= 1.81 Transcript Type= NA chr19 17226198 17229218 17226198 17229218 + transcript2832.chr19.nic@OCEL1 transcript2832.chr19.nic protein_coding 17226198,17226693,17226994,17227840,17228256 17226316,17226869,17227199,17228005,17229218 Gene ID= ENSG00000099330.8 TPM= 1.81 Transcript Type= NA chr19 17226604 17229218 17226604 17229218 + transcript2837.chr19.nic@OCEL1 transcript2837.chr19.nic protein_coding 17226604,17227840,17228256,17229009 17227199,17228005,17228309,17229218 Gene ID= ENSG00000099330.8 TPM= 1.81 Transcript Type= NA chr19 17226607 17229218 17226607 17229218 + transcript2839.chr19.nic@OCEL1 transcript2839.chr19.nic protein_coding 17226607,17228256,17228803 17227199,17228309,17229218 Gene ID= ENSG00000099330.8 TPM= 3.55 Transcript Type= NA chr19 17226204 17229219 17226204 17229219 + ENST00000215061.8@OCEL1 ENST00000215061.8 protein_coding 17226204,17226693,17226994,17227840,17228256,17228803 17226316,17226869,17227199,17228005,17228309,17229219 Gene ID= ENSG00000099330.8 TPM= 18.04 Transcript Type= protein_coding chr19 17226225 17229215 17226225 17229215 + ENST00000601529.5@OCEL1 ENST00000601529.5 protein_coding 17226225,17226693,17226994,17228256,17228803 17226316,17226869,17227199,17228309,17229215 Gene ID= ENSG00000099330.8 TPM= 2.64 Transcript Type= protein_coding chr19 17226243 17229202 17226243 17229202 + ENST00000594283.5@OCEL1 ENST00000594283.5 protein_coding 17226243,17226693,17227840,17228256,17228803 17226316,17227199,17228005,17228309,17229202 Gene ID= ENSG00000099330.8 TPM= 1.13 Transcript Type= retained_intron chr19 17231883 17245940 17231883 17245940 - ENST00000291442.3@NR2F6 ENST00000291442.3 protein_coding 17244943,17240671,17235499,17231883 17245940,17240765,17236065,17232626 Gene ID= ENSG00000160113.5 TPM= 205.56 Transcript Type= protein_coding chr19 17267350 17279337 17267350 17279337 + ENST00000598188.5@BABAM1 ENST00000598188.5 protein_coding 17267350,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845 17267527,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337 Gene ID= ENSG00000105393.15 TPM= 70.61 Transcript Type= protein_coding chr19 17267443 17279337 17267443 17279337 + ENST00000601043.5@BABAM1 ENST00000601043.5 protein_coding 17267443,17268794,17271597,17273904,17274107,17275801,17276495,17276823,17278845 17267516,17269091,17271655,17274024,17274185,17275825,17276624,17276909,17279337 Gene ID= ENSG00000105393.15 TPM= 6.32 Transcript Type= protein_coding chr19 17292131 17303473 17292131 17303473 - ENST00000247706.3@ABHD8 ENST00000247706.3 protein_coding 17303242,17300856,17294675,17294288,17292131 17303473,17301624,17294845,17294504,17292831 Gene ID= ENSG00000127220.5 TPM= 103.23 Transcript Type= protein_coding chr19 17305487 17306846 17305487 17306846 + transcript2878.chr19.nnic@MRPL34 transcript2878.chr19.nnic protein_coding 17305487,17305831,17306166 17305681,17305957,17306846 Gene ID= ENSG00000130312.6 TPM= 2.72 Transcript Type= NA chr19 17305668 17306843 17305668 17306843 + ENST00000252602.1@MRPL34 ENST00000252602.1 protein_coding 17305668,17306166 17305957,17306843 Gene ID= ENSG00000130312.6 TPM= 124.97 Transcript Type= protein_coding chr19 17309531 17323301 17309531 17323301 + ENST00000359866.8@DDA1 ENST00000359866.8 protein_coding 17309531,17314023,17314338,17315934,17319546 17309657,17314103,17314389,17315995,17323301 Gene ID= ENSG00000130311.10 TPM= 65.2 Transcript Type= protein_coding chr19 17337544 17342735 17337544 17342735 + ENST00000324894.12@GTPBP3 ENST00000324894.12 protein_coding 17337544,17338008,17338365,17338539,17338954,17339123,17339434,17341044,17341478 17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342735 Gene ID= ENSG00000130299.16 TPM= 26.71 Transcript Type= protein_coding chr19 17337545 17342732 17337545 17342732 + transcript2893.chr19.nic@GTPBP3 transcript2893.chr19.nic protein_coding 17337545,17337899,17338365,17338539,17338954,17339123,17339434,17341044,17341478 17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342732 Gene ID= ENSG00000130299.16 TPM= 3.17 Transcript Type= NA chr19 17337555 17342723 17337555 17342723 + ENST00000600625.5@GTPBP3 ENST00000600625.5 protein_coding 17337555,17338008,17338365,17338539,17338954,17339123,17339434,17341107,17341478 17337664,17338255,17338451,17338741,17339026,17339266,17339599,17341322,17342723 Gene ID= ENSG00000130299.16 TPM= 16.3 Transcript Type= protein_coding chr19 17351448 17377350 17351448 17377350 - ENST00000252590.8@PLVAP ENST00000252590.8 protein_coding 17376920,17366099,17365286,17360772,17360528,17351448 17377350,17366195,17365998,17360832,17360609,17352368 Gene ID= ENSG00000130300.8 TPM= 316.94 Transcript Type= protein_coding chr19 17402939 17405648 17402939 17405648 - ENST00000252593.6@BST2 ENST00000252593.6 protein_coding 17405291,17404371,17404129,17403680,17402939 17405648,17404437,17404189,17403824,17403326 Gene ID= ENSG00000130303.12 TPM= 897.4 Transcript Type= protein_coding chr19 17405822 17415735 17405822 17415735 + transcript2926.chr19.nic@BISPR transcript2926.chr19.nic lincRNA 17405822,17406077,17413097 17405987,17406296,17415735 Gene ID= ENSG00000282851.1 TPM= 2.72 Transcript Type= NA chr19 17405741 17425333 17405741 17425333 + transcript2907.chr19.nic@MVB12A transcript2907.chr19.nic protein_coding 17405741,17406077,17420313,17420538,17422332,17423498,17423693,17424006,17424621,17424931 17405987,17406296,17420411,17420634,17422458,17423617,17423799,17424067,17424677,17425333 Gene ID= ENSG00000141971.12 TPM= 9.96 Transcript Type= NA chr19 17435510 17448726 17435510 17448726 - transcript2923.chr19.nnic@TMEM221 transcript2923.chr19.nnic protein_coding 17448143,17445199,17436697,17435510 17448726,17445284,17436927,17436041 Gene ID= ENSG00000188051.6 TPM= 7.24 Transcript Type= NA chr19 17468657 17506187 17468657 17506187 + transcript2946.chr19.nic@SLC27A1 transcript2946.chr19.nic protein_coding 17468657,17470540,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455 17469010,17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506187 Gene ID= ENSG00000130304.16 TPM= 82.49 Transcript Type= NA chr19 17468751 17506187 17468751 17506187 + transcript2954.chr19.nic@SLC27A1 transcript2954.chr19.nic protein_coding 17468751,17470540,17486563,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455 17469010,17470707,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506187 Gene ID= ENSG00000130304.16 TPM= 5.51 Transcript Type= NA chr19 17470444 17506168 17470444 17506168 + ENST00000252595.11@SLC27A1 ENST00000252595.11 protein_coding 17470444,17486563,17487174,17487460,17488848,17489008,17497255,17500278,17500495,17500712,17501273,17504455 17470707,17486957,17487335,17487529,17488939,17489117,17497464,17500404,17500632,17500876,17501419,17506168 Gene ID= ENSG00000130304.16 TPM= 47.17 Transcript Type= protein_coding chr19 17511629 17521288 17511629 17521288 + ENST00000252603.6@PGLS ENST00000252603.6 protein_coding 17511629,17516173,17517288,17517710,17520944 17511960,17516280,17517389,17517850,17521288 Gene ID= ENSG00000130313.6 TPM= 115 Transcript Type= protein_coding chr19 17555675 17583161 17555675 17583161 + transcript2974.chr19.nnic@COLGALT1 transcript2974.chr19.nnic protein_coding 17555675,17559311,17560348,17567406,17568509,17571870,17572483,17577195,17577361,17577957,17579482,17580699,17581177 17555973,17559421,17560465,17567540,17568713,17571991,17572602,17577271,17577467,17578089,17579609,17580905,17583161 Gene ID= ENSG00000130309.10 TPM= 6.79 Transcript Type= NA chr19 17555594 17583159 17555594 17583159 + ENST00000252599.8@COLGALT1 ENST00000252599.8 protein_coding 17555594,17559311,17560348,17567406,17568509,17572483,17577195,17577361,17577957,17579482,17580699,17581177 17555973,17559421,17560465,17567540,17568713,17572602,17577271,17577467,17578089,17579609,17580905,17583159 Gene ID= ENSG00000130309.10 TPM= 50.26 Transcript Type= protein_coding chr19 17719352 17734516 17719352 17734516 + ENST00000324096.8@MAP1S ENST00000324096.8 protein_coding 17719352,17720936,17724126,17725049,17725829,17733193,17734273 17719620,17721037,17724208,17725189,17728172,17733428,17734516 Gene ID= ENSG00000130479.10 TPM= 108.67 Transcript Type= protein_coding chr19 17747740 17788562 17747740 17788562 + transcript2987.chr19.nic@FCHO1 transcript2987.chr19.nic protein_coding 17747740,17754317,17754592,17755118,17762762,17764375,17766669,17770425,17770792,17772457,17772645,17774239,17774394,17775056,17775456,17775983,17776247,17776635,17778137,17778609,17781231,17781452,17781712,17783017,17784103,17784725,17786574,17787682,17788284 17747814,17754361,17754681,17755191,17762853,17764449,17766810,17770577,17770896,17772555,17772741,17774283,17774478,17775080,17775513,17776161,17776271,17776686,17778228,17778884,17781343,17781539,17781820,17783172,17784235,17784924,17786629,17787846,17788562 Gene ID= ENSG00000130475.14 TPM= 2.72 Transcript Type= NA chr19 17747740 17788562 17747740 17788562 + transcript2992.chr19.nnic@FCHO1 transcript2992.chr19.nnic protein_coding 17747740,17754317,17754592,17755118,17762762,17764375,17766669,17770425,17770792,17772457,17772645,17774239,17774394,17775056,17775456,17775983,17776247,17776635,17778137,17778609,17781231,17781452,17781712,17783017,17786574,17787682,17788284 17747814,17754361,17754681,17755191,17762853,17764449,17766810,17770577,17770896,17772555,17772741,17774283,17774478,17775080,17775513,17776161,17776271,17776686,17778228,17778884,17781343,17781539,17781820,17783172,17786629,17787846,17788562 Gene ID= ENSG00000130475.14 TPM= 1.81 Transcript Type= NA chr19 17747718 17788557 17747718 17788557 + ENST00000594202.5@FCHO1 ENST00000594202.5 protein_coding 17747718,17754317,17754592,17755122,17762762,17764375,17766669,17770425,17770792,17772457,17772645,17774239,17774394,17775056,17775456,17775983,17776247,17776635,17778137,17778609,17781231,17781452,17781712,17783017,17784103,17784725,17786574,17787682,17788270 17747814,17754361,17754685,17755191,17762853,17764449,17766810,17770577,17770896,17772555,17772741,17774283,17774478,17775080,17775513,17776161,17776271,17776686,17778228,17778884,17781343,17781539,17781820,17783172,17784235,17784924,17786629,17787846,17788557 Gene ID= ENSG00000130475.14 TPM= 2.72 Transcript Type= protein_coding chr19 17824786 17848032 17824786 17848032 - ENST00000458235.5@JAK3 ENST00000458235.5 protein_coding 17847946,17844234,17843777,17843380,17843027,17842316,17841640,17841389,17840230,17839477,17838263,17837932,17837129,17835924,17835083,17834852,17834571,17832790,17832519,17831674,17831228,17830503,17830108,17824786 17848032,17844430,17843900,17843491,17843172,17842610,17841762,17841546,17840341,17839663,17838390,17838063,17837213,17836051,17835215,17835003,17834721,17832929,17832708,17831798,17831400,17830620,17830218,17826910 Gene ID= ENSG00000105639.18 TPM= 9.96 Transcript Type= protein_coding chr19 17859876 17863316 17859876 17863316 + ENST00000222247.9@RPL18A ENST00000222247.9 protein_coding 17859876,17861293,17862094,17862918,17863171 17859974,17861472,17862223,17863027,17863316 Gene ID= ENSG00000105640.12 TPM= 759.75 Transcript Type= protein_coding chr19 17933016 17943937 17933016 17943937 + ENST00000445755.6@CCDC124 ENST00000445755.6 protein_coding 17933016,17936410,17942656,17943261,17943508 17933048,17936579,17942845,17943375,17943937 Gene ID= ENSG00000007080.10 TPM= 56.14 Transcript Type= protein_coding chr19 18001087 18014100 18001087 18014100 + transcript3005.chr19.nnic@ARRDC2 transcript3005.chr19.nnic protein_coding 18001087,18007421,18008711,18008971,18009592,18009783,18010196,18010572,18012913 18001573,18008584,18008777,18009118,18009694,18010039,18010358,18010729,18014100 Gene ID= ENSG00000105643.9 TPM= 2.04 Transcript Type= NA chr19 18007219 18014100 18007219 18014100 + transcript3006.chr19.nnic@ARRDC2 transcript3006.chr19.nnic protein_coding 18007219,18008236,18008711,18008971,18009592,18009783,18010196,18010572,18012913 18007842,18008584,18008777,18009118,18009694,18010039,18010358,18010729,18014100 Gene ID= ENSG00000105643.9 TPM= 2.04 Transcript Type= NA chr19 18001132 18014102 18001132 18014102 + ENST00000379656.7@ARRDC2 ENST00000379656.7 protein_coding 18001132,18008711,18008971,18009592,18009783,18010196,18010572,18012913 18001573,18008777,18009118,18009694,18010039,18010358,18010729,18014102 Gene ID= ENSG00000105643.9 TPM= 12 Transcript Type= protein_coding chr19 18008168 18014102 18008168 18014102 + ENST00000222250.4@ARRDC2 ENST00000222250.4 protein_coding 18008168,18008711,18008971,18009592,18009783,18010196,18010572,18012913 18008584,18008777,18009118,18009694,18010039,18010358,18010729,18014102 Gene ID= ENSG00000105643.9 TPM= 3.85 Transcript Type= protein_coding chr19 18153118 18170540 18153118 18170540 + ENST00000222254.12@PIK3R2 ENST00000222254.12 protein_coding 18153118,18155457,18160471,18160919,18161054,18161279,18161966,18162202,18162408,18162967,18163263,18166160,18167130,18168475,18168726,18169087 18153294,18156201,18160563,18160969,18161185,18161495,18162051,18162310,18162506,18163147,18163388,18166302,18167306,18168546,18168896,18170540 Gene ID= ENSG00000105647.16 TPM= 450.51 Transcript Type= protein_coding chr19 18173667 18178117 18173667 18178117 + ENST00000407280.3@IFI30 ENST00000407280.3 protein_coding 18173667,18175040,18175311,18175605,18177140,18177711,18177849 18173973,18175222,18175385,18175697,18177292,18177764,18178117 Gene ID= ENSG00000216490.3 TPM= 239.97 Transcript Type= protein_coding chr19 18193182 18196742 18193182 18196742 + ENST00000599612.2@MPV17L2 ENST00000599612.2 protein_coding 18193182,18193864,18194777,18194958,18195999 18193468,18194034,18194853,18195086,18196742 Gene ID= ENSG00000254858.9 TPM= 59.77 Transcript Type= protein_coding chr19 18196784 18204074 18196784 18204074 - ENST00000222256.8@RAB3A ENST00000222256.8 protein_coding 18203896,18202513,18200327,18198725,18196784 18204074,18202740,18200445,18198849,18197660 Gene ID= ENSG00000105649.9 TPM= 2.72 Transcript Type= protein_coding chr19 18306230 18323274 18306230 18323274 - ENST00000593829.5@LSM4 ENST00000593829.5 protein_coding 18323018,18316024,18312604,18309678,18306230 18323274,18316065,18312702,18309861,18307555 Gene ID= ENSG00000130520.10 TPM= 161.64 Transcript Type= protein_coding chr19 18306907 18323071 18306907 18323071 - ENST00000252816.10@LSM4 ENST00000252816.10 protein_coding 18323018,18312604,18309678,18306907 18323071,18312702,18309861,18307555 Gene ID= ENSG00000130520.10 TPM= 1.81 Transcript Type= protein_coding chr19 18340587 18369950 18340587 18369950 + ENST00000269919.10@PGPEP1 ENST00000269919.10 protein_coding 18340587,18342859,18355895,18357383,18363391 18340715,18342911,18356011,18357615,18369950 Gene ID= ENSG00000130517.13 TPM= 26.26 Transcript Type= protein_coding chr19 18386158 18389176 18386158 18389176 + ENST00000252809.3@GDF15 ENST00000252809.3 protein_coding 18386158,18388286 18386466,18389176 Gene ID= ENSG00000130513.6 TPM= 1.81 Transcript Type= protein_coding chr19 18391149 18397611 18391149 18397611 - ENST00000595840.1@LRRC25 ENST00000595840.1 protein_coding 18397453,18396185,18391149 18397611,18396972,18392125 Gene ID= ENSG00000175489.9 TPM= 14.94 Transcript Type= protein_coding chr19 18391144 18397617 18391144 18397617 - ENST00000339007.3@LRRC25 ENST00000339007.3 protein_coding 18396185,18391144 18397617,18392125 Gene ID= ENSG00000175489.9 TPM= 27.62 Transcript Type= protein_coding chr19 18419400 18434561 18419400 18434561 + transcript3057.chr19.nic@SSBP4 transcript3057.chr19.nic protein_coding 18419400,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217 18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434561 Gene ID= ENSG00000130511.15 TPM= 5.43 Transcript Type= NA chr19 18419270 18434561 18419270 18434561 + transcript3060.chr19.nic@SSBP4 transcript3060.chr19.nic protein_coding 18419270,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217 18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433932,18434561 Gene ID= ENSG00000130511.15 TPM= 34.41 Transcript Type= NA chr19 18433233 18434561 18433233 18434561 + transcript3100.chr19.nic@SSBP4 transcript3100.chr19.nic protein_coding 18433233,18433710,18434217 18433613,18433932,18434561 Gene ID= ENSG00000130511.15 TPM= 6.79 Transcript Type= NA chr19 18419336 18434562 18419336 18434562 + ENST00000348495.10@SSBP4 ENST00000348495.10 protein_coding 18419336,18427351,18427752,18427898,18430841,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217 18419707,18427423,18427813,18427982,18430930,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562 Gene ID= ENSG00000130511.15 TPM= 54.71 Transcript Type= protein_coding chr19 18419355 18434562 18419355 18434562 + ENST00000270061.11@SSBP4 ENST00000270061.11 protein_coding 18419355,18427351,18427752,18427898,18430841,18431353,18431647,18431793,18432000,18432147,18432559,18432700,18432829,18432973,18433135,18433585,18433710,18434217 18419707,18427423,18427813,18427982,18430930,18431418,18431706,18431862,18432070,18432214,18432604,18432735,18432883,18433043,18433213,18433613,18433817,18434562 Gene ID= ENSG00000130511.15 TPM= 7.62 Transcript Type= protein_coding chr19 18433275 18434562 18433275 18434562 + ENST00000599699.2@SSBP4 ENST00000599699.2 protein_coding 18433275,18433710,18434217 18433613,18433817,18434562 Gene ID= ENSG00000130511.15 TPM= 12.9 Transcript Type= protein_coding chr19 18434377 18438820 18434377 18438820 - transcript3076.chr19.nic@ISYNA1 transcript3076.chr19.nic protein_coding 18438093,18437860,18437599,18436684,18436330,18436032,18435757,18435563,18435266,18434377 18438820,18437988,18437760,18437105,18436479,18436247,18435921,18435676,18435483,18435117 Gene ID= ENSG00000105655.18 TPM= 34.89 Transcript Type= NA chr19 18434809 18438167 18434809 18438167 - ENST00000457269.8@ISYNA1 ENST00000457269.8 protein_coding 18438093,18437860,18436973,18436684,18436330,18436032,18435757,18435563,18435266,18434809 18438167,18437988,18437105,18436877,18436479,18436247,18435921,18435676,18435483,18435117 Gene ID= ENSG00000105655.18 TPM= 4.07 Transcript Type= protein_coding chr19 18434822 18438164 18434822 18438164 - ENST00000577916.6@ISYNA1 ENST00000577916.6 protein_coding 18438093,18437860,18437599,18436330,18436032,18435757,18435563,18435266,18434822 18438164,18437988,18437760,18437105,18436247,18435921,18435676,18435483,18435117 Gene ID= ENSG00000105655.18 TPM= 5.89 Transcript Type= retained_intron chr19 18442663 18522127 18442663 18522127 - ENST00000262809.8@ELL ENST00000262809.8 protein_coding 18521921,18472835,18465797,18465412,18461578,18458205,18451552,18450477,18446748,18446309,18445224,18442663 18522127,18472882,18465918,18465575,18461852,18458329,18451648,18450975,18446814,18446480,18445268,18444868 Gene ID= ENSG00000105656.12 TPM= 35.32 Transcript Type= protein_coding chr19 18531751 18543577 18531751 18543577 - ENST00000597960.7@FKBP8 ENST00000597960.7 protein_coding 18543482,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531751 18543577,18541995,18539720,18539459,18538436,18537773,18533347,18532795,18532255 Gene ID= ENSG00000105701.15 TPM= 8.8 Transcript Type= protein_coding chr19 18531762 18543660 18531762 18543660 - ENST00000608443.5@FKBP8 ENST00000608443.5 protein_coding 18543486,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762 18543660,18541995,18539720,18539459,18538436,18537773,18533347,18532795,18532255 Gene ID= ENSG00000105701.15 TPM= 632.72 Transcript Type= protein_coding chr19 18531762 18542972 18531762 18542972 - ENST00000596558.6@FKBP8 ENST00000596558.6 protein_coding 18542888,18541679,18539551,18539371,18538216,18537601,18533270,18532664,18531762 18542972,18541995,18539720,18539459,18538433,18537773,18533347,18532795,18532255 Gene ID= ENSG00000105701.15 TPM= 11.22 Transcript Type= protein_coding chr19 18557762 18569387 18557762 18569387 + ENST00000540691.5@KXD1 ENST00000540691.5 protein_coding 18557762,18560420,18562036,18564869,18567132,18568402 18557914,18560550,18562157,18565021,18567178,18569387 Gene ID= ENSG00000105700.10 TPM= 3.67 Transcript Type= protein_coding chr19 18557762 18569387 18557762 18569387 + ENST00000539106.5@KXD1 ENST00000539106.5 protein_coding 18557762,18562036,18564869,18567132,18568402 18557949,18562157,18565021,18567178,18569387 Gene ID= ENSG00000105700.10 TPM= 3.67 Transcript Type= protein_coding chr19 18557788 18569378 18557788 18569378 + ENST00000222307.8@KXD1 ENST00000222307.8 protein_coding 18557788,18562036,18564869,18567132,18568402 18557914,18562157,18565021,18567178,18569378 Gene ID= ENSG00000105700.10 TPM= 87.66 Transcript Type= protein_coding chr19 18571730 18575202 18571730 18575202 + ENST00000596304.5@UBA52 ENST00000596304.5 protein_coding 18571730,18573293,18573662,18574870,18575057 18571836,18573403,18573748,18574972,18575202 Gene ID= ENSG00000221983.7 TPM= 1.09 Transcript Type= protein_coding chr19 18571802 18575241 18571802 18575241 + ENST00000430157.6@UBA52 ENST00000430157.6 protein_coding 18571802,18573293,18573662,18574870,18575057 18571887,18573403,18573748,18574972,18575241 Gene ID= ENSG00000221983.7 TPM= 174.72 Transcript Type= protein_coding chr19 18571855 18575229 18571855 18575229 + ENST00000596273.5@UBA52 ENST00000596273.5 protein_coding 18571855,18572351,18573293,18573662,18574870,18575057 18571887,18572607,18573403,18573748,18574972,18575229 Gene ID= ENSG00000221983.7 TPM= 3.58 Transcript Type= protein_coding chr19 18571882 18575234 18571882 18575234 + ENST00000595158.5@UBA52 ENST00000595158.5 protein_coding 18571882,18573293,18573662,18574870,18575057 18572145,18573403,18573748,18574972,18575234 Gene ID= ENSG00000221983.7 TPM= 4.48 Transcript Type= protein_coding chr19 18571875 18575242 18571875 18575242 + ENST00000595683.5@UBA52 ENST00000595683.5 protein_coding 18571875,18572351,18573293,18573662,18574870,18575057 18571909,18572607,18573403,18573748,18574972,18575242 Gene ID= ENSG00000221983.7 TPM= 9.92 Transcript Type= protein_coding chr19 18593233 18606799 18593233 18606799 - transcript3156.chr19.nic@CRLF1 transcript3156.chr19.nic protein_coding 18606542,18599565,18598772,18598432,18596892,18596664,18594247,18594065,18593233 18606799,18599846,18598901,18598601,18597049,18596790,18594434,18594107,18593579 Gene ID= ENSG00000006016.10 TPM= 5.43 Transcript Type= NA chr19 18593233 18606969 18593233 18606969 - transcript3157.chr19.nnic@CRLF1 transcript3157.chr19.nnic protein_coding 18606542,18599565,18598772,18598432,18596892,18596622,18594247,18594065,18593233 18606969,18599846,18598901,18598601,18597049,18596790,18594434,18594112,18593579 Gene ID= ENSG00000006016.10 TPM= 21.73 Transcript Type= NA chr19 18593237 18606850 18593237 18606850 - ENST00000392386.7@CRLF1 ENST00000392386.7 protein_coding 18606542,18599565,18598772,18598432,18596892,18596622,18594247,18594065,18593237 18606850,18599846,18598901,18598601,18597049,18596790,18594434,18594107,18593579 Gene ID= ENSG00000006016.10 TPM= 60.67 Transcript Type= protein_coding chr19 18588796 18592336 18588796 18592336 + ENST00000450195.6@C19orf60 ENST00000450195.6 protein_coding 18588796,18588995,18589479,18590854,18592108 18588900,18589077,18589683,18590933,18592336 Gene ID= ENSG00000006015.17 TPM= 18.56 Transcript Type= protein_coding chr19 18588725 18592336 18588725 18592336 + ENST00000358607.10@C19orf60 ENST00000358607.10 protein_coding 18588725,18588995,18589413,18590854,18592108 18588900,18589077,18589683,18590933,18592336 Gene ID= ENSG00000006015.17 TPM= 39.39 Transcript Type= protein_coding chr19 18588798 18592336 18588798 18592336 + ENST00000600997.5@C19orf60 ENST00000600997.5 protein_coding 18588798,18588995,18590854 18588900,18589683,18592336 Gene ID= ENSG00000006015.17 TPM= 4.53 Transcript Type= retained_intron chr19 18588809 18592327 18588809 18592327 + ENST00000597371.1@C19orf60 ENST00000597371.1 protein_coding 18588809,18588995,18590854,18592108 18588900,18589683,18590933,18592327 Gene ID= ENSG00000006015.17 TPM= 33.51 Transcript Type= retained_intron chr19 18683677 18777952 18683677 18777952 + ENST00000321949.12@CRTC1 ENST00000321949.12 protein_coding 18683677,18742910,18745823,18747053,18749781,18753500,18759551,18760008,18765404,18768485,18771442,18774900,18775641,18777171 18683828,18743026,18745960,18747114,18749875,18753585,18759591,18760228,18765528,18768793,18771546,18774986,18775821,18777952 Gene ID= ENSG00000105662.15 TPM= 3.62 Transcript Type= protein_coding chr19 18831938 18868236 18831938 18868236 + ENST00000262803.9@UPF1 ENST00000262803.9 protein_coding 18831938,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521 18832440,18846119,18847833,18850242,18850868,18852296,18853071,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868236 Gene ID= ENSG00000005007.12 TPM= 71.54 Transcript Type= protein_coding chr19 18832001 18868229 18832001 18868229 + ENST00000599848.5@UPF1 ENST00000599848.5 protein_coding 18832001,18845980,18847744,18850075,18850688,18852135,18852987,18853252,18854601,18854879,18855124,18855925,18856186,18856877,18857320,18860321,18860826,18862010,18863438,18864170,18865289,18865561,18866044,18866521 18832440,18846119,18847833,18850242,18850868,18852296,18853104,18853350,18854709,18855038,18855242,18856089,18856300,18857020,18857533,18860438,18860982,18862152,18863612,18864251,18865450,18865778,18866166,18868229 Gene ID= ENSG00000005007.12 TPM= 26.26 Transcript Type= protein_coding chr19 18877917 18896185 18877917 18896185 - transcript3192.chr19.nic@CERS1 transcript3192.chr19.nic protein_coding 18895824,18893416,18884087,18880274,18879241,18878930,18877917 18896185,18893575,18884267,18880435,18879388,18879039,18878098 Gene ID= ENSG00000223802.7 TPM= 1.81 Transcript Type= NA chr19 18899514 18919397 18899514 18919397 - ENST00000262812.8@COPE ENST00000262812.8 protein_coding 18919223,18912984,18910971,18906960,18905576,18904771,18903268,18900381,18899873,18899514 18919397,18913046,18911071,18907112,18905629,18904852,18903423,18900449,18899947,18899726 Gene ID= ENSG00000105669.13 TPM= 403.87 Transcript Type= protein_coding chr19 18899517 18919363 18899517 18919363 - ENST00000349893.8@COPE ENST00000349893.8 protein_coding 18919223,18912984,18910971,18906960,18905576,18904771,18900381,18899873,18899517 18919363,18913046,18911071,18907112,18905629,18904852,18900449,18899947,18899726 Gene ID= ENSG00000105669.13 TPM= 5.43 Transcript Type= protein_coding chr19 18919685 18928631 18919685 18928631 + transcript3195.chr19.nic@DDX49 transcript3195.chr19.nic protein_coding 18919685,18920651,18920834,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128 18919856,18920703,18920909,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928631 Gene ID= ENSG00000105671.11 TPM= 2.26 Transcript Type= NA chr19 18919664 18925554 18919664 18925554 + transcript3206.chr19.nic@DDX49 transcript3206.chr19.nic protein_coding 18919664,18920580,18920834,18921663,18921843,18922326,18922604,18924233,18924623,18924882 18919856,18920703,18920909,18921748,18921964,18922513,18922744,18924308,18924699,18925554 Gene ID= ENSG00000105671.11 TPM= 1.81 Transcript Type= NA chr19 18919664 18925554 18919664 18925554 + transcript3220.chr19.nic@DDX49 transcript3220.chr19.nic protein_coding 18919664,18920580,18921663,18921843,18922326,18922604,18924233,18924623,18924882 18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18925554 Gene ID= ENSG00000105671.11 TPM= 1.81 Transcript Type= NA chr19 18919675 18928627 18919675 18928627 + ENST00000247003.8@DDX49 ENST00000247003.8 protein_coding 18919675,18920580,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128 18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928627 Gene ID= ENSG00000105671.11 TPM= 56.6 Transcript Type= protein_coding chr19 18919675 18928633 18919675 18928633 + ENST00000629999.2@DDX49 ENST00000629999.2 protein_coding 18919675,18920580,18920834,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128 18919856,18920703,18920909,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928633 Gene ID= ENSG00000105671.11 TPM= 5.89 Transcript Type= protein_coding chr19 18919738 18928622 18919738 18928622 + ENST00000602113.5@DDX49 ENST00000602113.5 protein_coding 18919738,18920651,18921663,18921843,18922326,18922604,18924233,18924623,18924882,18926303,18927766,18927965,18928128 18919856,18920703,18921748,18921964,18922513,18922744,18924308,18924699,18924979,18926377,18927854,18928036,18928622 Gene ID= ENSG00000105671.11 TPM= 4.07 Transcript Type= nonsense_mediated_decay chr19 18929201 18941284 18929201 18941284 - transcript3213.chr19.nic@HOMER3 transcript3213.chr19.nic protein_coding 18941193,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929201 18941284,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634 Gene ID= ENSG00000051128.18 TPM= 19.02 Transcript Type= NA chr19 18929203 18941214 18929203 18941214 - ENST00000392351.7@HOMER3 ENST00000392351.7 protein_coding 18941051,18938969,18938728,18938353,18934303,18932924,18931976,18931509,18931325,18929203 18941214,18939049,18938884,18938484,18934410,18933045,18932132,18931625,18931411,18929634 Gene ID= ENSG00000051128.18 TPM= 54.33 Transcript Type= protein_coding chr19 18990888 19033537 18990888 19033537 - transcript3230.chr19.nic@SUGP2 transcript3230.chr19.nic protein_coding 19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18993638,18990888 19033537,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740,18991149 Gene ID= ENSG00000064607.16 TPM= 4.53 Transcript Type= NA chr19 18990888 19033537 18990888 19033537 - transcript3235.chr19.nic@SUGP2 transcript3235.chr19.nic protein_coding 19033437,19030951,19024619,19019109,19009855,19008317,19004430,19004168,19001613,18995144,18994366,18990888 19033537,19031082,19026226,19019229,19010342,19008428,19004646,19004273,19001674,18995280,18994486,18991149 Gene ID= ENSG00000064607.16 TPM= 1.81 Transcript Type= NA chr19 18990888 19033844 18990888 19033844 - transcript3238.chr19.nic@SUGP2 transcript3238.chr19.nic protein_coding 19033762,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990888 19033844,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149 Gene ID= ENSG00000064607.16 TPM= 3.62 Transcript Type= NA chr19 18990888 19033499 18990888 19033499 - ENST00000452918.6@SUGP2 ENST00000452918.6 protein_coding 19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990888 19033499,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18993740 Gene ID= ENSG00000064607.16 TPM= 12.68 Transcript Type= protein_coding chr19 18990893 19033559 18990893 19033559 - ENST00000337018.10@SUGP2 ENST00000337018.10 protein_coding 19033437,19030951,19024619,19019109,19009855,19008317,19004168,19001613,18995144,18994366,18990893 19033559,19031082,19026226,19019229,19010342,19008428,19004646,19001674,18995280,18994486,18991149 Gene ID= ENSG00000064607.16 TPM= 11.77 Transcript Type= protein_coding chr19 19033554 19058177 19033554 19058177 + transcript3240.chr19.nnic@ARMC6 transcript3240.chr19.nnic protein_coding 19033554,19034131,19042711,19043992,19051622,19054152,19054695,19055791,19057416 19033930,19034238,19042877,19044074,19052195,19054321,19055396,19055928,19058177 Gene ID= ENSG00000105676.13 TPM= 1.99 Transcript Type= NA chr19 19033575 19058178 19033575 19058178 + ENST00000392335.6@ARMC6 ENST00000392335.6 protein_coding 19033575,19042711,19043992,19051622,19054152,19055265,19055791,19057416 19033930,19042877,19044074,19052195,19054321,19055396,19055928,19058178 Gene ID= ENSG00000105676.13 TPM= 49.99 Transcript Type= protein_coding chr19 19033577 19058177 19033577 19058177 + transcript3247.chr19.nic@ARMC6 transcript3247.chr19.nic protein_coding 19033577,19051622,19054152,19055265,19055791,19057416 19033930,19052195,19054321,19055396,19055928,19058177 Gene ID= ENSG00000105676.13 TPM= 1.99 Transcript Type= NA chr19 19033578 19058178 19033578 19058178 + ENST00000535612.5@ARMC6 ENST00000535612.5 protein_coding 19033578,19034131,19042711,19043992,19051622,19054152,19055265,19055791,19057416 19033930,19034238,19042877,19044074,19052195,19054321,19055396,19055928,19058178 Gene ID= ENSG00000105676.13 TPM= 11.05 Transcript Type= protein_coding chr19 19033610 19058159 19033610 19058159 + ENST00000269932.10@ARMC6 ENST00000269932.10 protein_coding 19033610,19042711,19043992,19051622,19054152,19055265,19055791,19057416 19034013,19042877,19044074,19052195,19054321,19055396,19055928,19058159 Gene ID= ENSG00000105676.13 TPM= 2.9 Transcript Type= protein_coding chr19 19063999 19112888 19063999 19112888 + ENST00000318596.7@SLC25A42 ENST00000318596.7 protein_coding 19063999,19096091,19101781,19104913,19105561,19106269,19107894,19110569 19064115,19096205,19101886,19104938,19105727,19106385,19108045,19112888 Gene ID= ENSG00000181035.13 TPM= 37.13 Transcript Type= protein_coding chr19 19119615 19138493 19119615 19138493 - ENST00000162044.13@TMEM161A ENST00000162044.13 protein_coding 19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119615 19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121421,19121166,19120861,19120183 Gene ID= ENSG00000064545.14 TPM= 111.83 Transcript Type= protein_coding chr19 19119615 19138493 19119615 19138493 - ENST00000587406.5@TMEM161A ENST00000587406.5 protein_coding 19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121308,19120992,19120765,19119615 19138493,19134887,19133210,19132754,19132508,19130307,19121819,19121668,19121166,19120861,19120183 Gene ID= ENSG00000064545.14 TPM= 7.7 Transcript Type= retained_intron chr19 19119660 19138447 19119660 19138447 - ENST00000587583.6@TMEM161A ENST00000587583.6 protein_coding 19138426,19134784,19133130,19132657,19132352,19130156,19121759,19121525,19121308,19120992,19120765,19119660 19138447,19134887,19133210,19132754,19132433,19130307,19121819,19121668,19121421,19121166,19120861,19120183 Gene ID= ENSG00000064545.14 TPM= 5.43 Transcript Type= protein_coding chr19 19176906 19192589 19176906 19192589 - ENST00000462790.7@BORCS8 ENST00000462790.7 protein_coding 19192081,19186893,19186034,19182573,19180686,19176906 19192589,19187005,19186098,19182683,19180761,19177460 Gene ID= ENSG00000254901.7 TPM= 14.49 Transcript Type= protein_coding chr19 19176906 19192139 19176906 19192139 - ENST00000585679.1@BORCS8 ENST00000585679.1 protein_coding 19192081,19182573,19180686,19176906 19192139,19182683,19180761,19177460 Gene ID= ENSG00000254901.7 TPM= 1.81 Transcript Type= protein_coding chr19 19192268 19201870 19192268 19201870 + transcript3277.chr19.nic@RFXANK transcript3277.chr19.nic protein_coding 19192268,19192960,19193939,19196966,19197186,19197521,19198107,19198657,19199154,19201649 19192554,19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201870 Gene ID= ENSG00000064490.13 TPM= 1.97 Transcript Type= NA chr19 19192744 19201866 19192744 19201866 + transcript3278.chr19.nic@RFXANK transcript3278.chr19.nic protein_coding 19192744,19193939,19196963,19197186,19197521,19198107,19198657,19199154,19200819,19201649 19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19200893,19201866 Gene ID= ENSG00000064490.13 TPM= 1.97 Transcript Type= NA chr19 19192819 19201870 19192819 19201870 + transcript3282.chr19.nic@RFXANK transcript3282.chr19.nic protein_coding 19192819,19193939,19196966,19197186,19197521,19198107,19198657,19199154,19201649 19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201870 Gene ID= ENSG00000064490.13 TPM= 13.74 Transcript Type= NA chr19 19192230 19201869 19192230 19201869 + ENST00000303088.8@RFXANK ENST00000303088.8 protein_coding 19192230,19192960,19193939,19196963,19197186,19197521,19198107,19198657,19199154,19201649 19192554,19193100,19194133,19197046,19197251,19197621,19198232,19198723,19199234,19201869 Gene ID= ENSG00000064490.13 TPM= 20.08 Transcript Type= protein_coding chr19 19192911 19201866 19192911 19201866 + ENST00000392324.8@RFXANK ENST00000392324.8 protein_coding 19192911,19193939,19196966,19197521,19198107,19198657,19199154,19201649 19193100,19194133,19197046,19197621,19198232,19198723,19199234,19201866 Gene ID= ENSG00000064490.13 TPM= 1.06 Transcript Type= protein_coding chr19 19201416 19203424 19201416 19203424 - ENST00000331552.11@NR2C2AP ENST00000331552.11 protein_coding 19203023,19202791,19202470,19202331,19201416 19203424,19202881,19202575,19202398,19202041 Gene ID= ENSG00000184162.14 TPM= 15.55 Transcript Type= protein_coding chr19 19276512 19320510 19276512 19320510 - transcript3298.chr19.nic@SUGP1 transcript3298.chr19.nic protein_coding 19320463,19316422,19310097,19303348,19302265,19296989,19280185,19279213,19278690,19277734,19276947,19276512 19320510,19316593,19310200,19306076,19302388,19297344,19280291,19279390,19278796,19277879,19277076,19276674 Gene ID= ENSG00000105705.15 TPM= 4.53 Transcript Type= NA chr19 19320681 19358755 19320681 19358755 + ENST00000262815.12@MAU2 ENST00000262815.12 protein_coding 19320681,19335718,19336122,19337170,19338845,19340846,19341252,19342535,19342776,19343837,19344849,19345304,19347280,19348889,19349155,19349325,19354355,19355264,19355708 19321135,19335735,19336187,19337265,19338939,19340873,19341407,19342681,19342866,19343940,19344926,19345369,19347366,19348938,19349232,19349436,19354445,19355391,19358755 Gene ID= ENSG00000129933.20 TPM= 52.82 Transcript Type= protein_coding chr19 19320804 19358755 19320804 19358755 + transcript3306.chr19.nic@MAU2 transcript3306.chr19.nic protein_coding 19320804,19335718,19336122,19337170,19338845,19340846,19341252,19342535,19342776,19343837,19344849,19345304,19348889,19349155,19349325,19354355,19355264,19355708 19321135,19335735,19336187,19337265,19338939,19340873,19341407,19342681,19342866,19343940,19344926,19347366,19348938,19349232,19349436,19354445,19355391,19358755 Gene ID= ENSG00000129933.20 TPM= 5.73 Transcript Type= NA chr19 19320821 19358755 19320821 19358755 + transcript3307.chr19.nic@MAU2 transcript3307.chr19.nic protein_coding 19320821,19337170,19338845,19340846,19341252,19342535,19342776,19343837,19344849,19345304,19347280,19348889,19349155,19349325,19354355,19355264,19355708 19321135,19337265,19338939,19340873,19341407,19342681,19342866,19343940,19344926,19345369,19347366,19348938,19349232,19349436,19354445,19355391,19358755 Gene ID= ENSG00000129933.20 TPM= 7.54 Transcript Type= NA chr19 19405759 19506981 19405759 19506981 + transcript3311.chr19.nic@GATAD2A transcript3311.chr19.nic protein_coding 19405759,19436131,19465340,19492306,19492581,19494294,19495754,19496052,19498443,19501118,19501969,19502331,19505344 19406019,19436219,19465614,19492438,19492712,19494383,19495885,19496219,19498722,19501416,19502043,19502526,19506981 Gene ID= ENSG00000167491.17 TPM= 5.36 Transcript Type= NA chr19 19385803 19506981 19385803 19506981 + transcript3313.chr19.nic@GATAD2A transcript3313.chr19.nic protein_coding 19385803,19465345,19492306,19492581,19494294,19495754,19496052,19498443,19501118,19501969,19502331,19505344 19386138,19465614,19492438,19492712,19494383,19495885,19496219,19498722,19501416,19502043,19502526,19506981 Gene ID= ENSG00000167491.17 TPM= 6.27 Transcript Type= NA chr19 19405669 19507340 19405669 19507340 + transcript3314.chr19.nic@GATAD2A transcript3314.chr19.nic protein_coding 19405669,19465340,19492306,19492581,19494294,19495754,19496052,19498443,19501118,19501969,19502331,19505344 19406019,19465614,19492438,19492712,19494383,19495885,19496219,19498722,19501416,19502043,19502526,19507340 Gene ID= ENSG00000167491.17 TPM= 24.38 Transcript Type= NA chr19 19405787 19506981 19405787 19506981 + transcript3319.chr19.nnic@GATAD2A transcript3319.chr19.nnic protein_coding 19405787,19465340,19494294,19495754,19496052,19498443,19501118,19501969,19502331,19505344 19406019,19465614,19494383,19495885,19496219,19498722,19501416,19502043,19502526,19506981 Gene ID= ENSG00000167491.17 TPM= 4.75 Transcript Type= NA chr19 19515755 19528198 19515755 19528198 + ENST00000507754.8@NDUFA13 ENST00000507754.8 protein_coding 19515755,19526182,19527281,19527701,19528007 19516332,19526260,19527352,19527770,19528198 Gene ID= ENSG00000186010.18 TPM= 319.2 Transcript Type= protein_coding chr19 19629476 19643667 19629476 19643667 - ENST00000203556.8@GMIP ENST00000203556.8 protein_coding 19643511,19642535,19641976,19641810,19640446,19640296,19640085,19638402,19638159,19637920,19637365,19636917,19636707,19635644,19635415,19635025,19634792,19634507,19633803,19630471,19629476 19643667,19642619,19642051,19641867,19640571,19640360,19640192,19638482,19638329,19638057,19637561,19637029,19636796,19635721,19635569,19635213,19634929,19634703,19634190,19630537,19630336 Gene ID= ENSG00000089639.10 TPM= 13.58 Transcript Type= protein_coding chr19 19645195 19663695 19645195 19663695 - transcript3348.chr19.nnic@ATP13A1 transcript3348.chr19.nnic protein_coding 19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645195 19663695,19659987,19659824,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654144,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532 Gene ID= ENSG00000105726.16 TPM= 20.87 Transcript Type= NA chr19 19645203 19663693 19645203 19663693 - ENST00000357324.10@ATP13A1 ENST00000357324.10 protein_coding 19663271,19659898,19659601,19657336,19656994,19656847,19656660,19656054,19655878,19655528,19655316,19655119,19654543,19653969,19653784,19652595,19651689,19649741,19649567,19647599,19647414,19647129,19646205,19645874,19645647,19645203 19663693,19659987,19659791,19657408,19657149,19656916,19656766,19656183,19655933,19655654,19655453,19655239,19654700,19654144,19653894,19652720,19651797,19649940,19649663,19647759,19647528,19647325,19646347,19645985,19645790,19645532 Gene ID= ENSG00000105726.16 TPM= 217.38 Transcript Type= protein_coding chr19 19668796 19680952 19668796 19680952 + ENST00000318110.9@ZNF101 ENST00000318110.9 protein_coding 19668796,19677864,19678726,19679181,19680856 19668966,19677990,19678786,19680554,19680952 Gene ID= ENSG00000181896.11 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr19 19710471 19733097 19710471 19733097 - ENST00000344099.3@ZNF14 ENST00000344099.3 protein_coding 19732956,19714361,19714091,19710471 19733097,19714487,19714151,19713089 Gene ID= ENSG00000105708.8 TPM= 7.24 Transcript Type= protein_coding chr19 19776586 19793607 19776586 19793607 + transcript3375.chr19.nnic@AC011477.1 transcript3375.chr19.nnic transcribed_unprocessed_pseudogene 19776586,19786609,19789680,19790987 19776994,19786691,19789821,19793607 Gene ID= ENSG00000267419.2 TPM= 3.62 Transcript Type= NA chr19 19798789 19821722 19798789 19821722 - ENST00000545006.1@ZNF506 ENST00000545006.1 protein_coding 19821601,19806942,19806031,19798789 19821722,19807068,19806126,19799450 Gene ID= ENSG00000081665.13 TPM= 5.43 Transcript Type= protein_coding chr19 19995135 20039534 19995135 20039534 - transcript3385.chr19.nnic@ZNF682 transcript3385.chr19.nnic protein_coding 20039343,20024250,20023004,20004636,19995135 20039534,20024376,20023099,20004747,19995740 Gene ID= ENSG00000197124.11 TPM= 1.81 Transcript Type= NA chr19 20004418 20039506 20004418 20039506 - ENST00000397165.6@ZNF682 ENST00000397165.6 protein_coding 20039343,20024250,20023004,20004418 20039506,20024376,20023099,20007275 Gene ID= ENSG00000197124.11 TPM= 1.81 Transcript Type= protein_coding chr19 20528988 20565819 20528988 20565819 - transcript3395.chr19.nnic@ZNF737 transcript3395.chr19.nnic protein_coding 20565638,20553709,20552475,20544619,20536050,20528988 20565819,20553835,20552570,20545976,20536150,20531322 Gene ID= ENSG00000237440.8 TPM= 5.43 Transcript Type= NA chr19 20534855 20565819 20534855 20565819 - transcript3399.chr19.nic@ZNF737 transcript3399.chr19.nic protein_coding 20565638,20553709,20552475,20544619,20534855 20565819,20553835,20552570,20545976,20536150 Gene ID= ENSG00000237440.8 TPM= 3.62 Transcript Type= NA chr19 20547577 20565819 20547577 20565819 - transcript3401.chr19.nnic@ZNF737 transcript3401.chr19.nnic protein_coding 20565638,20553709,20552475,20547577 20565819,20553835,20552570,20548138 Gene ID= ENSG00000237440.8 TPM= 4.53 Transcript Type= NA chr19 20543431 20565735 20543431 20565735 - ENST00000427401.8@ZNF737 ENST00000427401.8 protein_coding 20565638,20553709,20552475,20543431 20565735,20553835,20552570,20545976 Gene ID= ENSG00000237440.8 TPM= 1.81 Transcript Type= protein_coding chr19 20620061 20661593 20620061 20661593 - ENST00000601440.5@ZNF626 ENST00000601440.5 protein_coding 20661444,20646279,20645684,20620061 20661593,20646405,20645779,20625650 Gene ID= ENSG00000188171.15 TPM= 2.72 Transcript Type= protein_coding chr19 20644702 20661596 20644702 20661596 - ENST00000291750.6@ZNF626 ENST00000291750.6 protein_coding 20661444,20646279,20645684,20644702 20661596,20646405,20645779,20645448 Gene ID= ENSG00000188171.15 TPM= 12.68 Transcript Type= protein_coding chr19 20923276 20943977 20923276 20943977 + ENST00000300540.7@ZNF85 ENST00000300540.7 protein_coding 20923276,20934024,20934949,20942801 20923403,20934150,20935047,20943977 Gene ID= ENSG00000105750.14 TPM= 1.81 Transcript Type= protein_coding chr19 20923288 20950697 20923288 20950697 + ENST00000328178.12@ZNF85 ENST00000328178.12 protein_coding 20923288,20934024,20934949,20948744 20923403,20934150,20935047,20950697 Gene ID= ENSG00000105750.14 TPM= 3.62 Transcript Type= protein_coding chr19 20923344 21384859 20923344 21384859 + transcript3418.chr19.nnic@ZNF431 transcript3418.chr19.nnic protein_coding 20923344,21034089,21182623,21183358,21384514 20923403,21034184,21183112,21183852,21384859 Gene ID= ENSG00000196705.8 TPM= 1.81 Transcript Type= NA chr19 21020620 21060050 21020620 21060050 + ENST00000261560.9@ZNF430 ENST00000261560.9 protein_coding 21020620,21022789,21033456,21034086,21056631 21020803,21022881,21033582,21034184,21060050 Gene ID= ENSG00000118620.12 TPM= 9.06 Transcript Type= protein_coding chr19 21505601 21540665 21505601 21540665 + transcript3439.chr19.nnic@ZNF429 transcript3439.chr19.nnic protein_coding 21505601,21529658,21530589,21536280 21506080,21529784,21530684,21540665 Gene ID= ENSG00000197013.9 TPM= 9.96 Transcript Type= NA chr19 21505599 21540665 21505599 21540665 + transcript3446.chr19.nnic@ZNF429 transcript3446.chr19.nnic protein_coding 21505599,21530589,21536280 21505774,21530684,21540665 Gene ID= ENSG00000197013.9 TPM= 5.43 Transcript Type= NA chr19 21505564 21538078 21505564 21538078 + ENST00000358491.8@ZNF429 ENST00000358491.8 protein_coding 21505564,21529658,21530589,21536280 21505774,21529784,21530684,21538078 Gene ID= ENSG00000197013.9 TPM= 10.87 Transcript Type= protein_coding chr19 21586449 21615524 21586449 21615524 - transcript3451.chr19.nnic@AC123912.2 transcript3451.chr19.nnic lincRNA 21614484,21597284,21596348,21586449 21615524,21597365,21596471,21586894 Gene ID= ENSG00000268240.1 TPM= 3.62 Transcript Type= NA chr19 21722766 21767628 21722766 21767628 - ENST00000358296.10@ZNF100 ENST00000358296.10 protein_coding 21767427,21765694,21744941,21744017,21722766 21767628,21765786,21745067,21744115,21727989 Gene ID= ENSG00000197020.10 TPM= 10.87 Transcript Type= protein_coding chr19 21804949 21852068 21804949 21852068 - ENST00000357491.10@ZNF43 ENST00000357491.10 protein_coding 21851905,21819095,21817888,21804949 21852068,21819221,21817986,21809807 Gene ID= ENSG00000198521.11 TPM= 3.62 Transcript Type= protein_coding chr19 21807326 21836208 21807326 21836208 - ENST00000354959.8@ZNF43 ENST00000354959.8 protein_coding 21836036,21819095,21817888,21807326 21836208,21819221,21817986,21809807 Gene ID= ENSG00000198521.11 TPM= 2.72 Transcript Type= protein_coding chr19 23269886 23274247 23269886 23274247 - ENST00000638919.1@AC092329.4 ENST00000638919.1 processed_transcript 23274076,23269886 23274247,23270292 Gene ID= ENSG00000284428.1 TPM= 1.81 Transcript Type= lincRNA chr19 23337833 23395498 23337833 23395498 - transcript3468.chr19.nic@ZNF91 transcript3468.chr19.nic protein_coding 23395325,23374638,23373742,23358430,23337833 23395498,23374764,23373837,23362725,23339054 Gene ID= ENSG00000167232.13 TPM= 2.72 Transcript Type= NA chr19 23357696 23395560 23357696 23395560 - ENST00000300619.11@ZNF91 ENST00000300619.11 protein_coding 23395325,23374638,23373742,23357696 23395560,23374764,23373837,23362725 Gene ID= ENSG00000167232.13 TPM= 5.43 Transcript Type= protein_coding chr19 23739195 23758891 23739195 23758891 - ENST00000402377.3@ZNF681 ENST00000402377.3 protein_coding 23758747,23755425,23754823,23739195 23758891,23755551,23754918,23745323 Gene ID= ENSG00000196172.9 TPM= 1.81 Transcript Type= protein_coding chr19 24033415 24129854 24033415 24129854 + transcript3491.chr19.nnic@ZNF254 transcript3491.chr19.nnic protein_coding 24033415,24046184,24049405,24105940,24106548,24126254 24033621,24046279,24049548,24106066,24106643,24129854 Gene ID= ENSG00000213096.10 TPM= 8.6 Transcript Type= NA chr19 24033405 24129961 24033405 24129961 + ENST00000613065.4@ZNF254 ENST00000613065.4 protein_coding 24033405,24046184,24105940,24106548,24126254 24033621,24046279,24106066,24106643,24129961 Gene ID= ENSG00000213096.10 TPM= 1.36 Transcript Type= protein_coding chr19 24087160 24129961 24087160 24129961 + ENST00000611359.3@ZNF254 ENST00000611359.3 protein_coding 24087160,24106548,24126254 24087337,24106643,24129961 Gene ID= ENSG00000213096.10 TPM= 2.26 Transcript Type= protein_coding chr19 24087193 24129852 24087193 24129852 + ENST00000357002.4@ZNF254 ENST00000357002.4 protein_coding 24087193,24105940,24106548,24126254 24087337,24106066,24106643,24129852 Gene ID= ENSG00000213096.10 TPM= 6.79 Transcript Type= protein_coding chr19 27730266 27793922 27730266 27793922 - transcript3502.chr19.nnic@LINC00662 transcript3502.chr19.nnic lincRNA 27793532,27793000,27746098,27732796,27730266 27793922,27793232,27746340,27732967,27730707 Gene ID= ENSG00000261824.6 TPM= 4.53 Transcript Type= NA chr19 29207267 29213174 29207267 29213174 - transcript3509.chr19.nnic@UQCRFS1 transcript3509.chr19.nnic protein_coding 29213066,29212905,29207267 29213174,29213008,29208158 Gene ID= ENSG00000169021.5 TPM= 14.04 Transcript Type= NA chr19 29205321 29213541 29205321 29213541 - ENST00000304863.5@UQCRFS1 ENST00000304863.5 protein_coding 29212905,29205321 29213541,29208158 Gene ID= ENSG00000169021.5 TPM= 416.1 Transcript Type= protein_coding chr19 29698886 29715789 29698886 29715789 - ENST00000614091.4@C19orf12 ENST00000614091.4 protein_coding 29715563,29708254,29698886 29715789,29708423,29702977 Gene ID= ENSG00000131943.17 TPM= 2.72 Transcript Type= protein_coding chr19 29701163 29715221 29701163 29715221 - ENST00000392276.1@C19orf12 ENST00000392276.1 protein_coding 29715125,29701163 29715221,29702977 Gene ID= ENSG00000131943.17 TPM= 6.34 Transcript Type= protein_coding chr19 29811934 29824311 29811934 29824311 + transcript3532.chr19.nnic@CCNE1 transcript3532.chr19.nnic protein_coding 29811934,29812689,29812969,29817137,29817406,29820702,29821722,29821996,29822240,29822446,29823655 29812152,29812776,29813037,29817282,29817541,29820848,29821817,29822130,29822351,29822603,29824311 Gene ID= ENSG00000105173.13 TPM= 1.81 Transcript Type= NA chr19 29811898 29824308 29811898 29824308 + ENST00000262643.7@CCNE1 ENST00000262643.7 protein_coding 29811898,29812532,29812689,29812969,29817137,29817406,29820702,29821722,29821996,29822240,29822446,29823655 29812152,29812578,29812776,29813037,29817282,29817541,29820848,29821817,29822130,29822351,29822603,29824308 Gene ID= ENSG00000105173.13 TPM= 3.62 Transcript Type= protein_coding chr19 29942205 30015704 29942205 30015704 + transcript3543.chr19.nic@URI1 transcript3543.chr19.nic protein_coding 29942205,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285 29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30015704 Gene ID= ENSG00000105176.17 TPM= 3.62 Transcript Type= NA chr19 29942211 30015704 29942211 30015704 + transcript3545.chr19.nic@URI1 transcript3545.chr19.nic protein_coding 29942211,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30015536 29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015704 Gene ID= ENSG00000105176.17 TPM= 4.53 Transcript Type= NA chr19 29942211 30015704 29942211 30015704 + transcript3546.chr19.nic@URI1 transcript3546.chr19.nic protein_coding 29942211,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285 29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30015704 Gene ID= ENSG00000105176.17 TPM= 3.62 Transcript Type= NA chr19 29942251 30016608 29942251 30016608 + ENST00000392271.5@URI1 ENST00000392271.5 protein_coding 29942251,29971193,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30014887 29942664,29971227,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30016608 Gene ID= ENSG00000105176.17 TPM= 85.12 Transcript Type= protein_coding chr19 29942261 30015704 29942261 30015704 + ENST00000574110.5@URI1 ENST00000574110.5 protein_coding 29942261,29985223,29986282,30005361,30005651,30007470,30009005,30011094,30012285,30014887 29942664,29985301,29986417,30005452,30005708,30007638,30009353,30011236,30012531,30015704 Gene ID= ENSG00000105176.17 TPM= 24.45 Transcript Type= nonsense_mediated_decay chr19 32405749 32485889 32405749 32485889 + ENST00000392250.6@DPY19L3 ENST00000392250.6 protein_coding 32405749,32408217,32411239,32432716,32436446,32437194,32439112,32439776,32453145,32454939,32458100,32458351,32463366,32463869,32464728,32468731,32477522,32480399,32482079 32405909,32408356,32411372,32432806,32436567,32437339,32439235,32439910,32453276,32455040,32458173,32458509,32463488,32463980,32464784,32468813,32477654,32480557,32485889 Gene ID= ENSG00000178904.18 TPM= 4.07 Transcript Type= protein_coding chr19 32406125 32485889 32406125 32485889 + ENST00000342179.9@DPY19L3 ENST00000342179.9 protein_coding 32406125,32408217,32411239,32432716,32436446,32437194,32439112,32439776,32453145,32454939,32458100,32458351,32463366,32463869,32464728,32468731,32477522,32480399,32482079 32406302,32408356,32411372,32432806,32436567,32437339,32439235,32439910,32453276,32455040,32458173,32458509,32463488,32463980,32464784,32468813,32477654,32480557,32485889 Gene ID= ENSG00000178904.18 TPM= 3.17 Transcript Type= protein_coding chr19 32581201 32587387 32581201 32587387 + ENST00000419343.7@PDCD5 ENST00000419343.7 protein_coding 32581201,32582195,32584950,32585816 32581327,32582232,32585011,32587387 Gene ID= ENSG00000105185.11 TPM= 2.72 Transcript Type= protein_coding chr19 32581232 32587452 32581232 32587452 + ENST00000592786.5@PDCD5 ENST00000592786.5 protein_coding 32581232,32582195,32584950,32586858,32587253 32581327,32582232,32585011,32586929,32587452 Gene ID= ENSG00000105185.11 TPM= 1.36 Transcript Type= protein_coding chr19 32581202 32587425 32581202 32587425 + ENST00000221784.8@PDCD5 ENST00000221784.8 protein_coding 32581202,32582195,32584955,32585816,32586858,32587253 32581327,32582232,32585011,32585907,32586929,32587425 Gene ID= ENSG00000105185.11 TPM= 5.89 Transcript Type= nonsense_mediated_decay chr19 32597001 32675209 32597001 32675209 - transcript3578.chr19.nic@ANKRD27 transcript3578.chr19.nic protein_coding 32675071,32658914,32649682,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597001 32675209,32659045,32649792,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378 Gene ID= ENSG00000105186.15 TPM= 10.87 Transcript Type= NA chr19 32597001 32675209 32597001 32675209 - transcript3579.chr19.nnic@ANKRD27 transcript3579.chr19.nnic protein_coding 32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597001 32675209,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378 Gene ID= ENSG00000105186.15 TPM= 1.81 Transcript Type= NA chr19 32597001 32675209 32597001 32675209 - transcript3581.chr19.nnic@ANKRD27 transcript3581.chr19.nnic protein_coding 32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32599972,32599704,32597001 32675209,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32600050,32599776,32598378 Gene ID= ENSG00000105186.15 TPM= 2.72 Transcript Type= NA chr19 32597007 32675199 32597007 32675199 - ENST00000306065.8@ANKRD27 ENST00000306065.8 protein_coding 32675071,32658914,32649682,32646459,32644325,32643572,32643431,32643287,32643123,32642024,32640307,32639356,32631402,32628722,32628083,32626712,32625874,32622422,32619494,32619260,32617589,32615658,32607635,32605835,32604263,32602015,32599972,32599704,32597007 32675199,32659045,32649792,32646615,32644479,32643631,32643484,32643352,32643199,32642145,32640385,32639488,32631494,32628849,32628165,32626827,32625966,32622619,32619553,32619379,32617633,32615780,32607832,32605954,32604424,32602126,32600050,32599776,32598378 Gene ID= ENSG00000105186.15 TPM= 40.75 Transcript Type= protein_coding chr19 32879004 32971986 32879004 32971986 - transcript3593.chr19.nic@CEP89 transcript3593.chr19.nic protein_coding 32971836,32966360,32959900,32953615,32948266,32939857,32937631,32937013,32933451,32931429,32926934,32926190,32923439,32918224,32915337,32901245,32899857,32887752,32881844,32879004 32971986,32966466,32960058,32953801,32948368,32939885,32937673,32937120,32933669,32931571,32926984,32926273,32923542,32918339,32915517,32901412,32899998,32887841,32882013,32879378 Gene ID= ENSG00000121289.17 TPM= 1.81 Transcript Type= NA chr19 32968909 32971991 32968909 32971991 - ENST00000591863.1@CEP89 ENST00000591863.1 protein_coding 32971836,32968909 32971991,32971655 Gene ID= ENSG00000121289.17 TPM= 10.87 Transcript Type= protein_coding chr19 33080880 33130542 33080880 33130542 + ENST00000170564.6@GPATCH1 ENST00000170564.6 protein_coding 33080880,33088134,33090780,33093359,33094172,33095762,33096207,33097755,33101495,33106695,33109717,33111724,33112486,33113767,33114253,33117825,33119010,33125105,33126588,33130130 33081266,33088268,33090865,33093519,33094269,33095820,33096446,33097902,33101574,33106899,33110016,33111902,33112613,33113903,33114419,33118041,33119117,33125202,33126733,33130542 Gene ID= ENSG00000076650.6 TPM= 13.58 Transcript Type= protein_coding chr19 33194212 33208871 33194212 33208871 + transcript3613.chr19.nnic@LRP3 transcript3613.chr19.nnic protein_coding 33194212,33196730,33202848,33204638,33205246,33206556,33206988 33194858,33196777,33202986,33204852,33206362,33206733,33208871 Gene ID= ENSG00000130881.13 TPM= 39.43 Transcript Type= NA chr19 33194584 33208867 33194584 33208867 + ENST00000253193.8@LRP3 ENST00000253193.8 protein_coding 33194584,33196730,33202848,33204638,33205246,33206601,33206988 33194858,33196777,33202986,33204852,33206362,33206733,33208867 Gene ID= ENSG00000130881.13 TPM= 19.21 Transcript Type= protein_coding chr19 33208656 33225809 33208656 33225809 - transcript3604.chr19.nic@SLC7A10 transcript3604.chr19.nic protein_coding 33225553,33215769,33212851,33212514,33212292,33211414,33211225,33210467,33209308,33208656 33225809,33215973,33213002,33212639,33212445,33211537,33211328,33210898,33209485,33209021 Gene ID= ENSG00000130876.11 TPM= 1.81 Transcript Type= NA chr19 33373330 33382686 33373330 33382686 + ENST00000284000.8@CEBPG ENST00000284000.8 protein_coding 33373330,33379144 33373895,33382686 Gene ID= ENSG00000153879.8 TPM= 12.68 Transcript Type= protein_coding chr19 33386950 33521794 33386950 33521794 - ENST00000244137.11@PEPD ENST00000244137.11 protein_coding 33521744,33512593,33511028,33500938,33493290,33489996,33478046,33463987,33462995,33413575,33411672,33401721,33391295,33387890,33386950 33521794,33512776,33511155,33501001,33493337,33490057,33478090,33464062,33463041,33413643,33411749,33401869,33391479,33388081,33387481 Gene ID= ENSG00000124299.13 TPM= 224.73 Transcript Type= protein_coding chr19 33386980 33521791 33386980 33521791 - ENST00000397032.8@PEPD ENST00000397032.8 protein_coding 33521744,33512593,33511028,33500938,33493290,33489996,33478046,33413575,33411672,33401721,33391295,33387890,33386980 33521791,33512776,33511155,33501001,33493337,33490057,33478090,33413643,33411749,33401869,33391479,33388081,33387481 Gene ID= ENSG00000124299.13 TPM= 1.51 Transcript Type= protein_coding chr19 34172418 34229302 34172418 34229302 + transcript3644.chr19.nic@LSM14A transcript3644.chr19.nic protein_coding 34172418,34194478,34196634,34208929,34215596,34219391,34219706,34221507,34226408,34227365 34172763,34194641,34196763,34209051,34215661,34219573,34219877,34221738,34226464,34229302 Gene ID= ENSG00000257103.8 TPM= 4.3 Transcript Type= NA chr19 34172568 34229288 34172568 34229288 + ENST00000433627.9@LSM14A ENST00000433627.9 protein_coding 34172568,34194478,34196634,34208929,34215124,34215596,34219391,34219706,34221507,34226408,34227365 34172763,34194641,34196763,34209051,34215300,34215661,34219573,34219877,34221738,34226464,34229288 Gene ID= ENSG00000257103.8 TPM= 16.53 Transcript Type= protein_coding chr19 34254537 34355586 34254537 34355586 + ENST00000299505.6@KIAA0355 ENST00000299505.6 protein_coding 34254537,34299679,34319907,34327421,34327771,34327990,34330189,34333704,34339867,34341422,34347877,34349016,34351514,34352647 34254614,34300968,34320116,34327561,34327866,34328151,34330347,34333801,34339992,34342455,34348042,34349153,34351592,34355586 Gene ID= ENSG00000166398.12 TPM= 11.77 Transcript Type= protein_coding chr19 34347840 34365747 34347840 34365747 - transcript3662.chr19.nnic@AC010504.1 transcript3662.chr19.nnic antisense_RNA 34365253,34360333,34358485,34347840 34365747,34360425,34358916,34348420 Gene ID= ENSG00000267219.1 TPM= 1.81 Transcript Type= NA chr19 34364982 34400335 34364982 34400335 + ENST00000588991.6@GPI ENST00000588991.6 protein_coding 34364982,34365260,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901 34365019,34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400335 Gene ID= ENSG00000105220.14 TPM= 39.84 Transcript Type= protein_coding chr19 34365026 34400328 34365026 34400328 + ENST00000356487.9@GPI ENST00000356487.9 protein_coding 34365026,34366345,34366783,34368583,34377503,34377735,34378934,34379518,34381466,34393248,34393728,34393914,34396301,34396581,34399207,34399556,34399719,34399901 34365388,34366435,34366851,34368702,34377586,34377881,34379005,34379562,34381519,34393308,34393771,34394066,34396430,34396657,34399335,34399631,34399785,34400328 Gene ID= ENSG00000105220.14 TPM= 1053.15 Transcript Type= protein_coding chr19 34404384 34426167 34404384 34426167 + ENST00000246535.3@PDCD2L ENST00000246535.3 protein_coding 34404384,34404649,34404930,34409161,34413737,34421519,34425990 34404538,34404815,34404990,34409510,34413847,34421667,34426167 Gene ID= ENSG00000126249.7 TPM= 5.43 Transcript Type= protein_coding chr19 34426112 34428273 34426112 34428273 - ENST00000592220.1@AC008747.1 ENST00000592220.1 antisense_RNA 34428122,34426112 34428273,34426401 Gene ID= ENSG00000267024.1 TPM= 1.81 Transcript Type= antisense_RNA chr19 34428363 34469891 34428363 34469891 + transcript3670.chr19.nic@UBA2 transcript3670.chr19.nic protein_coding 34428363,34430093,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040 34428570,34430186,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34469891 Gene ID= ENSG00000126261.12 TPM= 4.53 Transcript Type= NA chr19 34428363 34471251 34428363 34471251 + ENST00000246548.8@UBA2 ENST00000246548.8 protein_coding 34428363,34430576,34431861,34433348,34434868,34438645,34443844,34445000,34450265,34451981,34454260,34454444,34458769,34460470,34464026,34466878,34469040 34428570,34430659,34431931,34433412,34434968,34438766,34443911,34445121,34450364,34452147,34454353,34454556,34458924,34460566,34464131,34467014,34471251 Gene ID= ENSG00000126261.12 TPM= 69.73 Transcript Type= protein_coding chr19 34481638 34512304 34481638 34512304 + ENST00000590071.6@WTIP ENST00000590071.6 protein_coding 34481638,34490376,34493037,34493263,34493492,34494586,34495703,34500129 34482641,34490477,34493104,34493325,34493622,34494637,34495771,34512304 Gene ID= ENSG00000142279.12 TPM= 23.54 Transcript Type= protein_coding chr19 34590713 34667420 34590713 34667420 - transcript3682.chr19.nnic@SCGB2B2 transcript3682.chr19.nnic protein_coding 34667352,34637475,34632598,34632008,34590713 34667420,34637581,34632640,34632051,34593599 Gene ID= ENSG00000205209.7 TPM= 1.81 Transcript Type= NA chr19 34677654 34686394 34677654 34686394 + transcript3688.chr19.nic@ZNF302 transcript3688.chr19.nic protein_coding 34677654,34678737,34682777,34683155,34684252 34677796,34678813,34682897,34683238,34686394 Gene ID= ENSG00000089335.20 TPM= 4.17 Transcript Type= NA chr19 34677678 34686392 34677678 34686392 + ENST00000505242.5@ZNF302 ENST00000505242.5 protein_coding 34677678,34678737,34682777,34683155,34684252 34678103,34678813,34682897,34683238,34686392 Gene ID= ENSG00000089335.20 TPM= 12.32 Transcript Type= protein_coding chr19 34677704 34686394 34677704 34686394 + transcript3694.chr19.nic@ZNF302 transcript3694.chr19.nic protein_coding 34677704,34682777,34683155,34684252 34678813,34682897,34683238,34686394 Gene ID= ENSG00000089335.20 TPM= 5.07 Transcript Type= NA chr19 34677662 34686397 34677662 34686397 + ENST00000457781.6@ZNF302 ENST00000457781.6 protein_coding 34677662,34678737,34682777,34683155,34684252 34677833,34678813,34682897,34683238,34686397 Gene ID= ENSG00000089335.20 TPM= 18.65 Transcript Type= protein_coding chr19 34677689 34686391 34677689 34686391 + ENST00000423823.6@ZNF302 ENST00000423823.6 protein_coding 34677689,34678737,34682777,34683155,34684252 34677856,34678813,34682897,34683238,34686391 Gene ID= ENSG00000089335.20 TPM= 17.75 Transcript Type= protein_coding chr19 34734139 34742870 34734139 34742870 + transcript3696.chr19.nic@ZNF181 transcript3696.chr19.nic protein_coding 34734139,34734970,34739148,34739523,34740611 34734360,34735046,34739268,34739621,34742870 Gene ID= ENSG00000197841.14 TPM= 9.06 Transcript Type= NA chr19 34766968 34773200 34766968 34773200 - ENST00000588760.1@ZNF599 ENST00000588760.1 protein_coding 34772824,34769429,34766968 34773200,34769555,34767411 Gene ID= ENSG00000153896.17 TPM= 4.53 Transcript Type= protein_coding chr19 34956354 34964049 34956354 34964049 - ENST00000404801.1@ZNF792 ENST00000404801.1 protein_coding 34963630,34960868,34960235,34956354 34964049,34960994,34960357,34959571 Gene ID= ENSG00000180884.9 TPM= 3.62 Transcript Type= protein_coding chr19 35000268 35026471 35000268 35026471 + transcript3713.chr19.nnic@GRAMD1A transcript3713.chr19.nnic protein_coding 35000268,35005685,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35022900,35023236,35023427,35026049 35000486,35005931,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35022911,35023343,35023547,35026471 Gene ID= ENSG00000089351.14 TPM= 5.98 Transcript Type= NA chr19 35000287 35026469 35000287 35026469 + ENST00000317991.9@GRAMD1A ENST00000317991.9 protein_coding 35000287,35009119,35009423,35009888,35010092,35010284,35011474,35013256,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35022900,35023236,35023427,35026049 35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013368,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35022911,35023343,35023547,35026469 Gene ID= ENSG00000089351.14 TPM= 197.35 Transcript Type= protein_coding chr19 35000323 35026469 35000323 35026469 + ENST00000600231.5@GRAMD1A ENST00000600231.5 protein_coding 35000323,35009119,35009423,35009888,35010092,35010284,35011474,35013541,35014189,35015824,35019191,35019391,35021502,35021691,35021951,35023236,35023427,35026049 35000486,35009329,35009443,35009972,35010195,35010379,35011554,35013691,35014387,35015967,35019309,35019533,35021605,35021864,35022038,35023343,35023547,35026469 Gene ID= ENSG00000089351.14 TPM= 17.14 Transcript Type= nonsense_mediated_decay chr19 35030426 35040452 35030426 35040452 + transcript3738.chr19.nnic@SCN1B transcript3738.chr19.nnic protein_coding 35030426,35032528,35033499,35039117,35039635,35039797,35040086 35030860,35032694,35033739,35039258,35039706,35040014,35040452 Gene ID= ENSG00000105711.11 TPM= 15.85 Transcript Type= NA chr19 35030466 35040449 35030466 35040449 + ENST00000262631.10@SCN1B ENST00000262631.10 protein_coding 35030466,35032528,35033499,35039117,35039635,35039797 35030860,35032694,35033739,35039258,35039706,35040449 Gene ID= ENSG00000105711.11 TPM= 19.47 Transcript Type= protein_coding chr19 35119288 35123655 35119288 35123655 + transcript3742.chr19.nic@FXYD3 transcript3742.chr19.nic protein_coding 35119288,35121078,35121222,35122765,35122918,35123271,35123441 35119416,35121110,35121245,35122839,35122954,35123308,35123655 Gene ID= ENSG00000089356.18 TPM= 1.81 Transcript Type= NA chr19 35154743 35169883 35154743 35169883 + ENST00000392219.6@FXYD5 ENST00000392219.6 protein_coding 35154743,35155551,35157421,35158344,35160709,35164156,35166142,35166251,35169566 35154809,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169883 Gene ID= ENSG00000089327.14 TPM= 28.07 Transcript Type= protein_coding chr19 35154753 35169859 35154753 35169859 + ENST00000541435.6@FXYD5 ENST00000541435.6 protein_coding 35154753,35155551,35157421,35158344,35160709,35164156,35166142,35166251,35169566 35154869,35155611,35157501,35158400,35160801,35164245,35166171,35166325,35169859 Gene ID= ENSG00000089327.14 TPM= 1.81 Transcript Type= protein_coding chr19 35248765 35267962 35248765 35267962 + ENST00000360798.7@LSR ENST00000360798.7 protein_coding 35248765,35250315,35258945,35266359,35266679,35266836,35267109,35267824 35249131,35250659,35259064,35266532,35266738,35266967,35267734,35267962 Gene ID= ENSG00000105699.16 TPM= 34.86 Transcript Type= protein_coding chr19 35248772 35267964 35248772 35267964 + ENST00000354900.7@LSR ENST00000354900.7 protein_coding 35248772,35250315,35258945,35262546,35266359,35266679,35266836,35267109,35267824 35249131,35250659,35259064,35262692,35266532,35266738,35266967,35267734,35267964 Gene ID= ENSG00000105699.16 TPM= 177.94 Transcript Type= protein_coding chr19 35268607 35279821 35268607 35279821 + transcript3775.chr19.nnic@USF2 transcript3775.chr19.nnic protein_coding 35268607,35268850,35269085,35269446,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167 35268716,35269010,35269163,35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279821 Gene ID= ENSG00000105698.15 TPM= 6.79 Transcript Type= NA chr19 35269065 35279812 35269065 35279812 + ENST00000222305.7@USF2 ENST00000222305.7 protein_coding 35269065,35269446,35269581,35269803,35270447,35270718,35271083,35278698,35278946,35279167 35269163,35269492,35269699,35270003,35270597,35270805,35271141,35278792,35279074,35279812 Gene ID= ENSG00000105698.15 TPM= 25.81 Transcript Type= protein_coding chr19 35282346 35285113 35282346 35285113 + ENST00000222304.3@HAMP ENST00000222304.3 protein_coding 35282346,35284789,35284938 35282667,35284848,35285113 Gene ID= ENSG00000105697.7 TPM= 2.72 Transcript Type= protein_coding chr19 35497221 35510505 35497221 35510505 - transcript3792.chr19.nic@DMKN transcript3792.chr19.nic protein_coding 35510379,35510184,35509911,35505939,35505718,35502830,35502136,35500533,35499958,35498874,35498716,35497647,35497221 35510505,35510252,35509961,35505986,35505765,35502886,35502183,35500580,35500029,35498897,35498763,35497681,35497538 Gene ID= ENSG00000161249.20 TPM= 1.81 Transcript Type= NA chr19 35503304 35510510 35503304 35510510 - ENST00000480507.1@DMKN ENST00000480507.1 protein_coding 35510379,35510184,35505939,35505718,35503304 35510510,35510252,35505986,35505765,35503447 Gene ID= ENSG00000161249.20 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr19 35503306 35510470 35503306 35510470 - ENST00000392206.6@DMKN ENST00000392206.6 protein_coding 35510371,35510184,35509911,35505939,35505718,35503306 35510470,35510252,35509961,35505986,35505765,35503447 Gene ID= ENSG00000161249.20 TPM= 1.81 Transcript Type= protein_coding chr19 35503304 35510423 35503304 35510423 - ENST00000474992.5@DMKN ENST00000474992.5 protein_coding 35510379,35510184,35505718,35503304 35510423,35510252,35505765,35503447 Gene ID= ENSG00000161249.20 TPM= 1.81 Transcript Type= processed_transcript chr19 35540738 35545505 35540738 35545505 - transcript3809.chr19.nic@TMEM147-AS1 transcript3809.chr19.nic antisense_RNA 35545319,35542911,35541751,35540738 35545505,35543097,35542074,35541584 Gene ID= ENSG00000236144.6 TPM= 1.81 Transcript Type= NA chr19 35540738 35546057 35540738 35546057 - transcript3810.chr19.nnic@TMEM147-AS1 transcript3810.chr19.nnic antisense_RNA 35545937,35542911,35541751,35540738 35546057,35543097,35542074,35541584 Gene ID= ENSG00000236144.6 TPM= 1.81 Transcript Type= NA chr19 35545595 35547526 35545595 35547526 + ENST00000222284.9@TMEM147 ENST00000222284.9 protein_coding 35545595,35545888,35546526,35546672,35546945,35547119,35547324 35545816,35545957,35546585,35546808,35547029,35547240,35547526 Gene ID= ENSG00000105677.11 TPM= 256.12 Transcript Type= protein_coding chr19 35545630 35547526 35545630 35547526 + ENST00000392204.6@TMEM147 ENST00000392204.6 protein_coding 35545630,35546526,35546672,35546945,35547119,35547324 35545957,35546585,35546808,35547029,35547240,35547526 Gene ID= ENSG00000105677.11 TPM= 4.37 Transcript Type= protein_coding chr19 35545658 35547523 35545658 35547523 + ENST00000595467.1@TMEM147 ENST00000595467.1 protein_coding 35545658,35547324 35547240,35547523 Gene ID= ENSG00000105677.11 TPM= 1.81 Transcript Type= retained_intron chr19 35545674 35547526 35545674 35547526 + ENST00000599895.1@TMEM147 ENST00000599895.1 protein_coding 35545674,35545888,35546526,35546672,35547324 35545816,35545957,35546585,35547240,35547526 Gene ID= ENSG00000105677.11 TPM= 1.2 Transcript Type= retained_intron chr19 35550194 35557905 35550194 35557905 - transcript3813.chr19.nic@ATP4A transcript3813.chr19.nic protein_coding 35557655,35556913,35555676,35555440,35555166,35554922,35553706,35553037,35551447,35551010,35550834,35550194 35557905,35557088,35555812,35555590,35555334,35555076,35553829,35553182,35551580,35551111,35550925,35550643 Gene ID= ENSG00000105675.8 TPM= 4.83 Transcript Type= NA chr19 35550194 35557837 35550194 35557837 - transcript3814.chr19.nic@ATP4A transcript3814.chr19.nic protein_coding 35557655,35555676,35555440,35555166,35554922,35553706,35553037,35551447,35551010,35550834,35550194 35557837,35555812,35555590,35555334,35555076,35553829,35553182,35551580,35551111,35550925,35550643 Gene ID= ENSG00000105675.8 TPM= 2.11 Transcript Type= NA chr19 35550194 35553716 35550194 35553716 - transcript3818.chr19.nic@ATP4A transcript3818.chr19.nic protein_coding 35553037,35551447,35551010,35550834,35550194 35553716,35551580,35551111,35550925,35550643 Gene ID= ENSG00000105675.8 TPM= 4.83 Transcript Type= NA chr19 35557943 35625284 35557943 35625284 + transcript3820.chr19.nnic@HAUS5 transcript3820.chr19.nnic protein_coding 35557943,35612609,35613730,35613868,35614035,35615042,35615227,35617124,35617287,35617855,35618071,35618402,35618569,35618887,35619424,35619613,35620012,35620195,35622601,35622876 35558027,35612892,35613792,35613900,35614059,35615147,35615386,35617193,35617369,35617912,35618195,35618465,35618699,35619049,35619504,35619758,35620123,35620327,35622733,35625284 Gene ID= ENSG00000249115.8 TPM= 19.92 Transcript Type= NA chr19 35612752 35623557 35612752 35623557 + ENST00000585968.5@HAUS5 ENST00000585968.5 protein_coding 35612752,35613730,35613868,35614035,35615042,35615227,35617124,35617287,35617855,35618071,35618402,35618569,35618887,35619424,35619613,35620195,35622601,35622876 35612892,35613792,35613900,35614059,35615147,35615386,35617193,35617369,35617912,35618195,35618465,35618699,35619049,35619504,35620123,35620327,35622733,35623557 Gene ID= ENSG00000249115.8 TPM= 1.81 Transcript Type= retained_intron chr19 35628994 35637702 35628994 35637702 + transcript3825.chr19.nnic@RBM42 transcript3825.chr19.nnic protein_coding 35628994,35629520,35631140,35631331,35632936,35633098,35633687,35634256,35637158,35637442 35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637702 Gene ID= ENSG00000126254.11 TPM= 7.24 Transcript Type= NA chr19 35628994 35637702 35628994 35637702 + transcript3826.chr19.nic@RBM42 transcript3826.chr19.nic protein_coding 35628994,35629520,35631140,35631331,35633098,35633687,35634256,35637158,35637442 35629281,35629673,35631224,35631405,35633252,35634019,35634373,35637352,35637702 Gene ID= ENSG00000126254.11 TPM= 57.05 Transcript Type= NA chr19 35629030 35637686 35629030 35637686 + ENST00000588161.5@RBM42 ENST00000588161.5 protein_coding 35629030,35629520,35631140,35631331,35633101,35633687,35634256,35637158,35637442 35629281,35629673,35631224,35631405,35633252,35634019,35634373,35637352,35637686 Gene ID= ENSG00000126254.11 TPM= 61.58 Transcript Type= protein_coding chr19 35629049 35637686 35629049 35637686 + ENST00000262633.8@RBM42 ENST00000262633.8 protein_coding 35629049,35629520,35631140,35631331,35632936,35633077,35633687,35634256,35637158,35637442 35629281,35629673,35631224,35631405,35633001,35633252,35634019,35634373,35637352,35637686 Gene ID= ENSG00000126254.11 TPM= 102.33 Transcript Type= protein_coding chr19 35643632 35644871 35643632 35644871 + transcript3830.chr19.nic@ETV2 transcript3830.chr19.nic protein_coding 35643632,35644235,35644652 35643753,35644347,35644871 Gene ID= ENSG00000105672.14 TPM= 1.81 Transcript Type= NA chr19 35648223 35658861 35648223 35658861 + ENST00000246554.7@COX6B1 ENST00000246554.7 protein_coding 35648223,35651233,35654571,35658594 35648403,35651349,35654671,35658861 Gene ID= ENSG00000126267.8 TPM= 166.62 Transcript Type= protein_coding chr19 35718019 35738878 35718019 35738878 + ENST00000420124.2@KMT2B ENST00000420124.2 protein_coding 35718019,35719469,35719784,35722359,35722568,35722995,35723447,35723732,35724637,35724989,35725220,35725479,35725723,35726236,35727156,35727438,35727698,35727881,35728098,35728774,35728985,35729159,35729967,35730342,35730538,35730707,35731908,35732215,35733597,35733763,35736690,35736912,35737086,35737636,35737859,35738062,35738282 35718381,35719541,35721804,35722472,35722718,35723274,35723502,35724007,35724731,35725087,35725333,35725625,35725818,35726353,35727269,35727622,35727787,35727985,35728171,35728889,35729076,35729296,35730125,35730462,35730616,35730867,35732135,35733508,35733686,35733872,35736827,35736986,35737263,35737743,35737942,35738191,35738878 Gene ID= ENSG00000272333.5 TPM= 11.77 Transcript Type= protein_coding chr19 35738789 35740620 35738789 35740620 - transcript3852.chr19.nic@AD000671.2 transcript3852.chr19.nic protein_coding 35740380,35739710,35738789 35740620,35740088,35739626 Gene ID= ENSG00000267120.3 TPM= 10.87 Transcript Type= NA chr19 35739252 35745432 35739252 35745432 - ENST00000589807.1@AD000671.2 ENST00000589807.1 protein_coding 35745348,35745125,35744626,35744323,35744070,35743809,35742396,35741024,35740380,35739710,35739252 35745432,35745212,35744738,35744421,35744145,35743904,35742619,35741228,35740564,35740088,35739626 Gene ID= ENSG00000267120.3 TPM= 6.34 Transcript Type= nonsense_mediated_decay chr19 35742529 35745438 35742529 35745438 - transcript3836.chr19.nic@U2AF1L4 transcript3836.chr19.nic protein_coding 35745348,35745125,35744626,35744323,35744070,35743809,35743296,35743155,35742529 35745438,35745212,35744692,35744421,35744145,35743904,35743345,35743205,35742803 Gene ID= ENSG00000161265.14 TPM= 1.81 Transcript Type= NA chr19 35742529 35745430 35742529 35745430 - transcript3838.chr19.nic@U2AF1L4 transcript3838.chr19.nic protein_coding 35745348,35745125,35744323,35744070,35743809,35743296,35743155,35742529 35745430,35745187,35744981,35744145,35743904,35743345,35743205,35742803 Gene ID= ENSG00000161265.14 TPM= 3.62 Transcript Type= NA chr19 35742528 35745430 35742528 35745430 - transcript3840.chr19.nic@U2AF1L4 transcript3840.chr19.nic protein_coding 35745348,35745125,35744626,35744323,35744070,35743809,35742528 35745430,35745187,35744692,35744421,35744145,35743904,35742803 Gene ID= ENSG00000161265.14 TPM= 1.94 Transcript Type= NA chr19 35742528 35745430 35742528 35745430 - transcript3841.chr19.nic@U2AF1L4 transcript3841.chr19.nic protein_coding 35745348,35745125,35744626,35744323,35744070,35743809,35742528 35745430,35745187,35744738,35744421,35744145,35743904,35742803 Gene ID= ENSG00000161265.14 TPM= 1.94 Transcript Type= NA chr19 35742532 35745445 35742532 35745445 - ENST00000292879.9@U2AF1L4 ENST00000292879.9 protein_coding 35745348,35745125,35744323,35744070,35743809,35742532 35745445,35745212,35744421,35744145,35743904,35742803 Gene ID= ENSG00000161265.14 TPM= 1.03 Transcript Type= protein_coding chr19 35742528 35745430 35742528 35745430 - transcript3846.chr19.nic@U2AF1L4 transcript3846.chr19.nic protein_coding 35745348,35745125,35744323,35744070,35743809,35742528 35745430,35745187,35744981,35744145,35743904,35742803 Gene ID= ENSG00000161265.14 TPM= 2.84 Transcript Type= NA chr19 35742528 35745438 35742528 35745438 - transcript3850.chr19.nic@U2AF1L4 transcript3850.chr19.nic protein_coding 35745348,35744323,35744070,35743809,35742528 35745438,35745212,35744145,35743904,35742803 Gene ID= ENSG00000161265.14 TPM= 3.75 Transcript Type= NA chr19 35742529 35745397 35742529 35745397 - ENST00000585554.5@U2AF1L4 ENST00000585554.5 protein_coding 35745348,35745125,35744323,35744070,35743809,35742529 35745397,35745212,35744981,35744145,35743904,35742803 Gene ID= ENSG00000161265.14 TPM= 5.56 Transcript Type= retained_intron chr19 35745591 35747002 35745591 35747002 + transcript3855.chr19.nnic@PSENEN transcript3855.chr19.nnic protein_coding 35745591,35745835,35746419,35746708,35746911 35745700,35745991,35746523,35746758,35747002 Gene ID= ENSG00000205155.7 TPM= 6.34 Transcript Type= NA chr19 35745591 35747002 35745591 35747002 + transcript3857.chr19.nnic@PSENEN transcript3857.chr19.nnic protein_coding 35745591,35745835,35746419,35746708,35746911 35745700,35745991,35746523,35746869,35747002 Gene ID= ENSG00000205155.7 TPM= 1.81 Transcript Type= NA chr19 35745114 35747519 35745114 35747519 + ENST00000587708.6@PSENEN ENST00000587708.6 protein_coding 35745114,35745835,35746419,35746708 35745700,35745991,35746523,35747519 Gene ID= ENSG00000205155.7 TPM= 36.22 Transcript Type= protein_coding chr19 35745619 35747004 35745619 35747004 + ENST00000222266.2@PSENEN ENST00000222266.2 protein_coding 35745619,35745873,35746419,35746708 35745700,35745991,35746523,35747004 Gene ID= ENSG00000205155.7 TPM= 5.43 Transcript Type= protein_coding chr19 35748361 35754519 35748361 35754519 + ENST00000301159.13@LIN37 ENST00000301159.13 protein_coding 35748361,35752176,35752434,35752804,35752914,35753087,35754017,35754246,35754393 35748758,35752251,35752484,35752833,35752999,35753253,35754157,35754319,35754519 Gene ID= ENSG00000267796.7 TPM= 3.62 Transcript Type= protein_coding chr19 35754569 35757029 35754569 35757029 - ENST00000004982.5@HSPB6 ENST00000004982.5 protein_coding 35756811,35755772,35754569 35757029,35755894,35755683 Gene ID= ENSG00000004776.12 TPM= 339.58 Transcript Type= protein_coding chr19 35775515 35788822 35775515 35788822 + ENST00000378944.9@ARHGAP33 ENST00000378944.9 protein_coding 35775515,35777824,35778280,35778464,35779032,35780211,35780421,35780582,35780757,35780920,35781150,35782373,35782597,35782762,35784172,35784953,35785189,35785409,35786413,35787168,35787644 35775664,35777908,35778360,35778601,35779124,35780333,35780498,35780648,35780816,35781072,35781252,35782517,35782679,35782869,35784317,35785106,35785334,35785483,35787072,35787559,35788822 Gene ID= ENSG00000004777.18 TPM= 1.81 Transcript Type= protein_coding chr19 35868488 35879794 35868488 35879794 + transcript3880.chr19.nic@APLP1 transcript3880.chr19.nic protein_coding 35868488,35869667,35870896,35871237,35871612,35871858,35872483,35873639,35874504,35874741,35876517,35877718,35878085,35878584,35878890,35879074,35879343 35868783,35869810,35871028,35871349,35871745,35872036,35872613,35873713,35874662,35874869,35876616,35877825,35878108,35878654,35878952,35879217,35879794 Gene ID= ENSG00000105290.11 TPM= 4.53 Transcript Type= NA chr19 35868445 35879788 35868445 35879788 + ENST00000221891.8@APLP1 ENST00000221891.8 protein_coding 35868445,35869667,35870896,35871237,35871612,35871858,35872483,35873639,35874504,35874741,35876517,35877718,35878082,35878584,35878890,35879074,35879343 35868783,35869810,35871028,35871349,35871745,35872036,35872613,35873713,35874662,35874869,35876616,35877825,35878108,35878654,35878952,35879217,35879788 Gene ID= ENSG00000105290.11 TPM= 9.96 Transcript Type= protein_coding chr19 35902480 35904377 35902480 35904377 + ENST00000246551.8@HCST ENST00000246551.8 protein_coding 35902480,35903351,35903772,35904120 35902636,35903416,35903903,35904377 Gene ID= ENSG00000126264.9 TPM= 2.72 Transcript Type= protein_coding chr19 35904401 35908295 35904401 35908295 - ENST00000424586.7@TYROBP ENST00000424586.7 protein_coding 35908168,35907446,35907218,35904401 35908295,35907580,35907261,35904634 Gene ID= ENSG00000011600.11 TPM= 7.24 Transcript Type= protein_coding chr19 35904403 35908275 35904403 35908275 - ENST00000544690.6@TYROBP ENST00000544690.6 protein_coding 35908168,35907446,35907218,35904403 35908275,35907580,35907264,35904634 Gene ID= ENSG00000011600.11 TPM= 2.72 Transcript Type= protein_coding chr19 36009124 36014239 36009124 36014239 - transcript3893.chr19.nic@ALKBH6 transcript3893.chr19.nic protein_coding 36014175,36013344,36013021,36011404,36010894,36010567,36009124 36014239,36013422,36013089,36011464,36011045,36010645,36009553 Gene ID= ENSG00000239382.10 TPM= 4.53 Transcript Type= NA chr19 36009124 36014239 36009124 36014239 - ENST00000378875.7@ALKBH6 ENST00000378875.7 protein_coding 36014175,36013344,36013021,36011404,36010894,36010567,36009124 36014239,36013422,36013089,36011464,36011045,36010683,36009553 Gene ID= ENSG00000239382.10 TPM= 9.96 Transcript Type= protein_coding chr19 36009124 36014239 36009124 36014239 - transcript3899.chr19.nic@ALKBH6 transcript3899.chr19.nic protein_coding 36014175,36013344,36013021,36011404,36010567,36009124 36014239,36013422,36013089,36011464,36011045,36009553 Gene ID= ENSG00000239382.10 TPM= 6.34 Transcript Type= NA chr19 36009121 36014208 36009121 36014208 - ENST00000490986.5@ALKBH6 ENST00000490986.5 protein_coding 36014175,36013344,36013021,36011404,36010894,36010567,36009121 36014208,36013422,36013089,36011464,36011077,36010683,36009553 Gene ID= ENSG00000239382.10 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr19 36113710 36115346 36113710 36115346 - ENST00000221859.8@POLR2I ENST00000221859.8 protein_coding 36114798,36114659,36114339,36114177,36114015,36113710 36115346,36114713,36114412,36114251,36114066,36113817 Gene ID= ENSG00000105258.8 TPM= 78.18 Transcript Type= protein_coding chr19 36113710 36114891 36113710 36114891 - ENST00000589591.5@POLR2I ENST00000589591.5 protein_coding 36114659,36114339,36114177,36114015,36113710 36114891,36114412,36114251,36114066,36113817 Gene ID= ENSG00000105258.8 TPM= 5.73 Transcript Type= retained_intron chr19 36113716 36114906 36113716 36114906 - ENST00000592962.5@POLR2I ENST00000592962.5 protein_coding 36114798,36114659,36114339,36114151,36114015,36113716 36114906,36114713,36114412,36114251,36114066,36113817 Gene ID= ENSG00000105258.8 TPM= 2.11 Transcript Type= nonsense_mediated_decay chr19 36114986 36125945 36114986 36125945 + ENST00000221855.7@TBCB ENST00000221855.7 protein_coding 36114986,36116041,36120710,36121527,36125451,36125668 36115674,36116184,36120806,36121718,36125523,36125945 Gene ID= ENSG00000105254.11 TPM= 141.27 Transcript Type= protein_coding chr19 36139558 36150357 36139558 36150357 + transcript3915.chr19.nnic@CAPNS1 transcript3915.chr19.nnic protein_coding 36139558,36140009,36140997,36142300,36142652,36142909,36143064,36145806,36145976,36146196,36149578,36149813 36139657,36140157,36141220,36142333,36142741,36142966,36143128,36145874,36146054,36146312,36149636,36150357 Gene ID= ENSG00000126247.10 TPM= 237.25 Transcript Type= NA chr19 36150922 36152869 36150922 36152869 - ENST00000292907.7@COX7A1 ENST00000292907.7 protein_coding 36152393,36151669,36151462,36150922 36152869,36151755,36151546,36151034 Gene ID= ENSG00000161281.10 TPM= 159.83 Transcript Type= protein_coding chr19 36150922 36152449 36150922 36152449 - ENST00000481297.1@COX7A1 ENST00000481297.1 protein_coding 36152393,36151462,36150922 36152449,36151755,36151034 Gene ID= ENSG00000161281.10 TPM= 22.19 Transcript Type= retained_intron chr19 36215105 36238768 36215105 36238768 + transcript3932.chr19.nnic@ZNF146 transcript3932.chr19.nnic protein_coding 36215105,36218122,36225954,36228748,36235659 36215196,36218195,36226073,36228819,36238768 Gene ID= ENSG00000167635.11 TPM= 4.89 Transcript Type= NA chr19 36214725 36238768 36214725 36238768 + transcript3933.chr19.nnic@ZNF146 transcript3933.chr19.nnic protein_coding 36214725,36218122,36228748,36235659 36215020,36218195,36228819,36238768 Gene ID= ENSG00000167635.11 TPM= 3.98 Transcript Type= NA chr19 36214734 36238768 36214734 36238768 + transcript3934.chr19.nnic@ZNF146 transcript3934.chr19.nnic protein_coding 36214734,36218122,36228748,36235659 36215155,36218195,36228819,36238768 Gene ID= ENSG00000167635.11 TPM= 8.51 Transcript Type= NA chr19 36214602 36238771 36214602 36238771 + ENST00000456324.5@ZNF146 ENST00000456324.5 protein_coding 36214602,36228748,36235659 36215196,36228819,36238771 Gene ID= ENSG00000167635.11 TPM= 5.8 Transcript Type= protein_coding chr19 36215133 36238774 36215133 36238774 + ENST00000443387.2@ZNF146 ENST00000443387.2 protein_coding 36215133,36218122,36228748,36235659 36215196,36218195,36228819,36238774 Gene ID= ENSG00000167635.11 TPM= 20.28 Transcript Type= protein_coding chr19 36313063 36331755 36313063 36331755 - transcript3940.chr19.nic@LINC00665 transcript3940.chr19.nic lincRNA 36331447,36330253,36322130,36321993,36321300,36315957,36313063 36331755,36330492,36322225,36322030,36321357,36316070,36313322 Gene ID= ENSG00000232677.6 TPM= 2.72 Transcript Type= NA chr19 36313063 36331755 36313063 36331755 - transcript3941.chr19.nic@LINC00665 transcript3941.chr19.nic lincRNA 36331447,36330253,36321993,36321300,36315957,36313063 36331755,36330492,36322030,36321357,36316070,36313322 Gene ID= ENSG00000232677.6 TPM= 3.62 Transcript Type= NA chr19 36324910 36331755 36324910 36331755 - transcript3945.chr19.nnic@LINC00665 transcript3945.chr19.nnic lincRNA 36331447,36330253,36324910 36331755,36330492,36325764 Gene ID= ENSG00000232677.6 TPM= 3.62 Transcript Type= NA chr19 36334453 36379199 36334453 36379199 - ENST00000270001.11@ZFP14 ENST00000270001.11 protein_coding 36379163,36367884,36362112,36360435,36334453 36379199,36367971,36362238,36360533,36341590 Gene ID= ENSG00000142065.13 TPM= 3.62 Transcript Type= protein_coding chr19 36391960 36418656 36391960 36418656 - ENST00000392161.3@ZFP82 ENST00000392161.3 protein_coding 36418492,36409781,36407887,36405580,36391960 36418656,36409867,36408013,36405672,36394110 Gene ID= ENSG00000181007.8 TPM= 2.72 Transcript Type= protein_coding chr19 36445121 36489539 36445121 36489539 - transcript3951.chr19.nic@ZNF566 transcript3951.chr19.nic protein_coding 36489486,36476549,36473332,36472911,36449399,36445121 36489539,36476616,36473458,36473009,36450001,36446115 Gene ID= ENSG00000186017.14 TPM= 1.81 Transcript Type= NA chr19 36510695 36528660 36510695 36528660 - ENST00000523638.5@ZNF260 ENST00000523638.5 protein_coding 36528219,36525155,36510695 36528660,36525373,36515699 Gene ID= ENSG00000254004.6 TPM= 10.87 Transcript Type= protein_coding chr19 36544386 36573252 36544386 36573252 - ENST00000591340.5@ZNF529 ENST00000591340.5 protein_coding 36573140,36572333,36556104,36554670,36544386 36573252,36572392,36556197,36554796,36548322 Gene ID= ENSG00000186020.12 TPM= 3.62 Transcript Type= protein_coding chr19 36605320 36628268 36605320 36628268 + transcript3959.chr19.nic@ZNF382 transcript3959.chr19.nic protein_coding 36605320,36607552,36609902,36610650,36626130 36605730,36607622,36610053,36610742,36628268 Gene ID= ENSG00000161298.17 TPM= 2.72 Transcript Type= NA chr19 36685465 36687410 36685465 36687410 - ENST00000425254.2@LINC01534 ENST00000425254.2 lincRNA 36687268,36686686,36685465 36687410,36686806,36686015 Gene ID= ENSG00000225975.6 TPM= 1.81 Transcript Type= lincRNA chr19 36685724 36687407 36685724 36687407 - transcript3967.chr19.nnic@LINC01534 transcript3967.chr19.nnic lincRNA 36687268,36686686,36685724 36687407,36686806,36685970 Gene ID= ENSG00000225975.6 TPM= 1.81 Transcript Type= NA chr19 36687596 36721335 36687596 36721335 + transcript3968.chr19.nic@ZNF567 transcript3968.chr19.nic protein_coding 36687596,36689401,36694802,36712386,36712781,36718948 36687634,36689497,36694876,36712512,36712867,36721335 Gene ID= ENSG00000189042.13 TPM= 3.62 Transcript Type= NA chr19 36687596 36721335 36687596 36721335 + transcript3969.chr19.nic@ZNF567 transcript3969.chr19.nic protein_coding 36687596,36689401,36712386,36712781,36718948 36687634,36689497,36712512,36712867,36721335 Gene ID= ENSG00000189042.13 TPM= 1.81 Transcript Type= NA chr19 36797516 36829159 36797516 36829159 + transcript3971.chr19.nnic@ZNF790-AS1 transcript3971.chr19.nnic antisense_RNA 36797516,36801203,36801876,36823731,36825380,36827650 36797811,36801240,36801933,36823821,36825522,36829159 Gene ID= ENSG00000267254.5 TPM= 1.81 Transcript Type= NA chr19 36797516 36828106 36797516 36828106 + transcript3973.chr19.nic@ZNF790-AS1 transcript3973.chr19.nic antisense_RNA 36797516,36801203,36801876,36823731,36827650 36797811,36801240,36801933,36823821,36828106 Gene ID= ENSG00000267254.5 TPM= 1.81 Transcript Type= NA chr19 36817428 36838384 36817428 36838384 - ENST00000356725.8@ZNF790 ENST00000356725.8 protein_coding 36838337,36825611,36823667,36823285,36817428 36838384,36825692,36823790,36823380,36820114 Gene ID= ENSG00000197863.8 TPM= 2.72 Transcript Type= protein_coding chr19 36916303 36981508 36916303 36981508 + transcript3985.chr19.nnic@ZNF568 transcript3985.chr19.nnic protein_coding 36916303,36917579,36922586,36925200,36936746,36937147,36974420,36976327,36979004 36916591,36917648,36922846,36925258,36936872,36937242,36974466,36976367,36981508 Gene ID= ENSG00000198453.12 TPM= 1.81 Transcript Type= NA chr19 37078433 37130321 37078433 37130321 + transcript3998.chr19.nic@ZNF420 transcript3998.chr19.nic protein_coding 37078433,37080345,37089039,37090995,37127128,37130144 37078570,37080388,37089127,37091121,37128906,37130321 Gene ID= ENSG00000197050.10 TPM= 2.72 Transcript Type= NA chr19 37078454 37130322 37078454 37130322 + transcript4006.chr19.nnic@ZNF420 transcript4006.chr19.nnic protein_coding 37078454,37080345,37089039,37127128 37078570,37080388,37089127,37130322 Gene ID= ENSG00000197050.10 TPM= 1.81 Transcript Type= NA chr19 37078453 37130323 37078453 37130323 + transcript4009.chr19.nnic@ZNF420 transcript4009.chr19.nnic protein_coding 37078453,37080345,37127128 37078570,37080388,37130323 Gene ID= ENSG00000197050.10 TPM= 1.81 Transcript Type= NA chr19 37078480 37130311 37078480 37130311 + ENST00000337995.3@ZNF420 ENST00000337995.3 protein_coding 37078480,37080345,37089039,37090995,37127128 37078570,37080388,37089127,37091121,37130311 Gene ID= ENSG00000197050.10 TPM= 13.58 Transcript Type= protein_coding chr19 37165385 37172694 37165385 37172694 - ENST00000588354.1@ZNF585A ENST00000588354.1 protein_coding 37172627,37169839,37165385 37172694,37170054,37165696 Gene ID= ENSG00000196967.10 TPM= 7.24 Transcript Type= protein_coding chr19 37217927 37243921 37217927 37243921 + transcript4014.chr19.nic@ZNF383 transcript4014.chr19.nic protein_coding 37217927,37224818,37230409,37235549,37235979,37242469 37218274,37224939,37230462,37235675,37236074,37243921 Gene ID= ENSG00000188283.11 TPM= 1.81 Transcript Type= NA chr19 37218190 37243921 37218190 37243921 + transcript4015.chr19.nnic@ZNF383 transcript4015.chr19.nnic protein_coding 37218190,37230409,37235549,37235979,37242469 37218274,37230462,37235675,37236074,37243921 Gene ID= ENSG00000188283.11 TPM= 1.81 Transcript Type= NA chr19 37317911 37364454 37317911 37364454 + transcript4018.chr19.nic@HKR1 transcript4018.chr19.nic protein_coding 37317911,37322185,37323533,37324208,37324796,37347190,37347777,37362109 37318186,37322232,37323570,37324265,37324936,37347316,37347872,37364454 Gene ID= ENSG00000181666.17 TPM= 3.17 Transcript Type= NA chr19 37317887 37364454 37317887 37364454 + transcript4023.chr19.nic@HKR1 transcript4023.chr19.nic protein_coding 37317887,37322185,37323533,37324208,37347190,37347777,37362109 37318186,37322232,37323570,37324265,37347316,37347872,37364454 Gene ID= ENSG00000181666.17 TPM= 8.6 Transcript Type= NA chr19 37334628 37364446 37334628 37364446 + transcript4031.chr19.nic@HKR1 transcript4031.chr19.nic protein_coding 37334628,37335169,37347190,37347777,37357962,37362106 37334782,37335257,37347316,37347872,37358039,37364446 Gene ID= ENSG00000181666.17 TPM= 4.07 Transcript Type= NA chr19 37334666 37364451 37334666 37364451 + ENST00000392153.7@HKR1 ENST00000392153.7 protein_coding 37334666,37335169,37347190,37347777,37362109 37334782,37335257,37347316,37347872,37364451 Gene ID= ENSG00000181666.17 TPM= 24.9 Transcript Type= protein_coding chr19 37411155 37467437 37411155 37467437 - ENST00000316950.10@ZNF569 ENST00000316950.10 protein_coding 37467084,37465313,37444907,37426252,37425868,37411155 37467437,37465473,37444964,37426378,37425963,37414419 Gene ID= ENSG00000196437.10 TPM= 3.62 Transcript Type= protein_coding chr19 37497167 37507047 37497167 37507047 - transcript4048.chr19.nic@ZNF793-AS1 transcript4048.chr19.nic antisense_RNA 37506583,37505846,37497167 37507047,37506040,37497592 Gene ID= ENSG00000266916.5 TPM= 3.62 Transcript Type= NA chr19 37594910 37614098 37594910 37614098 + transcript4053.chr19.nnic@ZNF540 transcript4053.chr19.nnic protein_coding 37594910,37598179,37598376,37599626,37601010,37611513 37595095,37598229,37598456,37599752,37601105,37614098 Gene ID= ENSG00000171817.16 TPM= 1.81 Transcript Type= NA chr19 37632488 37655474 37632488 37655474 - transcript4056.chr19.nnic@ZFP30 transcript4056.chr19.nnic protein_coding 37655420,37654712,37647814,37644610,37643265,37632488 37655474,37654879,37647899,37644736,37643363,37636305 Gene ID= ENSG00000120784.15 TPM= 1.81 Transcript Type= NA chr19 37696363 37719790 37696363 37719790 - ENST00000355202.8@ZNF607 ENST00000355202.8 protein_coding 37719269,37711610,37709696,37707914,37696363 37719790,37711692,37709822,37708012,37699895 Gene ID= ENSG00000198182.12 TPM= 9.06 Transcript Type= protein_coding chr19 37738302 37779590 37738302 37779590 - ENST00000536220.5@ZNF573 ENST00000536220.5 protein_coding 37779544,37773661,37771564,37770005,37738302 37779590,37773751,37771696,37770097,37740194 Gene ID= ENSG00000189144.13 TPM= 1.81 Transcript Type= protein_coding chr19 37907228 38208372 37907228 38208372 + ENST00000222345.10@SIPA1L3 ENST00000222345.10 protein_coding 37907228,38029089,38081256,38088721,38099962,38101052,38106537,38110227,38119306,38130498,38141184,38142573,38152840,38162253,38164479,38182519,38192145,38193537,38198389,38201862,38204127,38206097 37907358,38029156,38083099,38088851,38100150,38101226,38106640,38110384,38119882,38130772,38141435,38142710,38152967,38162371,38164906,38182740,38192310,38193780,38198532,38201997,38204208,38208372 Gene ID= ENSG00000105738.10 TPM= 1.36 Transcript Type= protein_coding chr19 38173594 38208366 38173594 38208366 + transcript4069.chr19.nic@SIPA1L3 transcript4069.chr19.nic protein_coding 38173594,38182519,38192145,38193537,38198389,38201862,38204127,38206097 38173672,38182740,38192310,38193780,38198532,38201997,38204208,38208366 Gene ID= ENSG00000105738.10 TPM= 11.32 Transcript Type= NA chr19 38251237 38256591 38251237 38256591 - ENST00000301242.8@PPP1R14A ENST00000301242.8 protein_coding 38256139,38252894,38252306,38251237 38256591,38252974,38252338,38251446 Gene ID= ENSG00000167641.10 TPM= 277.55 Transcript Type= protein_coding chr19 38264458 38292614 38264458 38292614 + ENST00000301244.11@SPINT2 ENST00000301244.11 protein_coding 38264458,38283627,38287876,38289138,38290119,38290537,38291840 38264998,38283797,38287935,38289191,38290280,38290575,38292614 Gene ID= ENSG00000167642.12 TPM= 230.91 Transcript Type= protein_coding chr19 38305115 38315945 38305115 38315945 - transcript4078.chr19.nnic@YIF1B transcript4078.chr19.nnic protein_coding 38315869,38309405,38309224,38308979,38308792,38307597,38307428,38306882,38305115 38315945,38309643,38309328,38309057,38308849,38307752,38307521,38306990,38305507 Gene ID= ENSG00000167645.16 TPM= 2.49 Transcript Type= NA chr19 38305114 38315785 38305114 38315785 - transcript4080.chr19.nic@YIF1B transcript4080.chr19.nic protein_coding 38315723,38309405,38309224,38308979,38308792,38307597,38307428,38305114 38315785,38309643,38309328,38309057,38308849,38307752,38307521,38305507 Gene ID= ENSG00000167645.16 TPM= 10.14 Transcript Type= NA chr19 38305114 38321888 38305114 38321888 - transcript4084.chr19.nnic@YIF1B transcript4084.chr19.nnic protein_coding 38321828,38309405,38309224,38308979,38308792,38307597,38307428,38305114 38321888,38309643,38309328,38309057,38308849,38307752,38307521,38305507 Gene ID= ENSG00000167645.16 TPM= 1.99 Transcript Type= NA chr19 38305115 38315805 38305115 38315805 - transcript4087.chr19.nic@YIF1B transcript4087.chr19.nic protein_coding 38315717,38309224,38308979,38308792,38307597,38307428,38305115 38315805,38309643,38309057,38308849,38307752,38307521,38305507 Gene ID= ENSG00000167645.16 TPM= 1.99 Transcript Type= NA chr19 38305118 38315963 38305118 38315963 - ENST00000339413.10@YIF1B ENST00000339413.10 protein_coding 38315860,38309405,38309224,38308979,38308792,38307597,38307428,38305118 38315963,38309643,38309328,38309057,38308849,38307752,38307521,38305507 Gene ID= ENSG00000167645.16 TPM= 10.82 Transcript Type= protein_coding chr19 38305114 38315923 38305114 38315923 - ENST00000337679.12@YIF1B ENST00000337679.12 protein_coding 38315869,38309405,38309224,38308979,38308792,38307597,38307428,38306914,38305114 38315923,38309643,38309328,38309057,38308849,38307752,38307521,38306990,38305507 Gene ID= ENSG00000167645.16 TPM= 3.4 Transcript Type= protein_coding chr19 38305115 38309923 38305115 38309923 - ENST00000392124.7@YIF1B ENST00000392124.7 protein_coding 38309405,38309224,38308979,38308792,38307597,38307428,38305115 38309923,38309328,38309057,38308849,38307752,38307521,38305507 Gene ID= ENSG00000167645.16 TPM= 2.67 Transcript Type= protein_coding chr19 38403135 38409084 38403135 38409084 + ENST00000252530.9@FAM98C ENST00000252530.9 protein_coding 38403135,38403338,38403560,38404908,38405344,38405519,38406910,38408751 38403218,38403486,38403694,38405113,38405421,38405635,38407077,38409084 Gene ID= ENSG00000130244.12 TPM= 18.11 Transcript Type= protein_coding chr19 38409059 38426305 38409059 38426305 - ENST00000615439.4@RASGRP4 ENST00000615439.4 protein_coding 38426069,38421969,38421095,38420908,38420131,38419860,38418391,38417052,38414848,38413394,38413193,38412931,38412672,38411345,38411115,38410886,38409059 38426305,38422153,38421200,38420970,38420262,38420013,38418564,38417168,38415123,38413474,38413297,38413049,38412816,38411381,38411249,38410998,38410096 Gene ID= ENSG00000171777.15 TPM= 2.72 Transcript Type= protein_coding chr19 38409056 38426233 38409056 38426233 - transcript4107.chr19.nic@RASGRP4 transcript4107.chr19.nic protein_coding 38426069,38421969,38420908,38420131,38419860,38418391,38417052,38414848,38413394,38412931,38412672,38411345,38411115,38410886,38409056 38426233,38422153,38421200,38420262,38420013,38418564,38417168,38415123,38413474,38413297,38412816,38411381,38411249,38410998,38410096 Gene ID= ENSG00000171777.15 TPM= 1.81 Transcript Type= NA chr19 38587669 38618003 38587669 38618003 - ENST00000396857.6@MAP4K1 ENST00000396857.6 protein_coding 38617797,38617568,38617354,38616195,38614390,38614245,38614043,38613880,38612611,38611243,38611051,38609909,38609596,38608112,38607990,38607864,38606173,38605568,38605409,38601441,38600077,38599925,38597486,38597326,38597034,38596312,38595939,38595640,38595485,38593282,38587669 38618003,38617625,38617444,38616259,38614445,38614292,38614085,38613952,38612742,38611305,38611132,38610025,38609674,38608170,38608033,38607911,38606215,38605730,38605491,38601525,38600153,38599985,38597594,38597384,38597137,38596486,38596001,38595729,38595555,38593337,38587817 Gene ID= ENSG00000104814.12 TPM= 1.81 Transcript Type= protein_coding chr19 38619097 38636955 38619097 38636955 + ENST00000248342.8@EIF3K ENST00000248342.8 protein_coding 38619097,38620337,38624077,38626028,38632430,38632601,38634993,38636889 38619327,38620435,38624197,38626102,38632496,38632678,38635118,38636955 Gene ID= ENSG00000178982.9 TPM= 98.7 Transcript Type= protein_coding chr19 38619095 38636953 38619095 38636953 + ENST00000593149.5@EIF3K ENST00000593149.5 protein_coding 38619095,38620337,38624077,38626028,38632430,38632601,38634993,38636889 38619223,38620435,38624197,38626102,38632496,38632678,38635118,38636953 Gene ID= ENSG00000178982.9 TPM= 2.72 Transcript Type= protein_coding chr19 38647623 38730536 38647623 38730536 + transcript4127.chr19.nic@ACTN4 transcript4127.chr19.nic protein_coding 38647623,38700600,38701002,38704934,38706044,38708117,38709395,38711276,38714469,38717086,38717927,38721538,38723614,38723937,38724157,38724431,38725724,38726957,38727946,38728996,38729274 38647907,38700714,38701121,38705020,38706131,38708195,38709476,38711361,38714561,38717316,38718074,38721688,38723722,38724077,38724339,38724565,38725903,38727103,38728026,38729154,38730536 Gene ID= ENSG00000130402.11 TPM= 39.84 Transcript Type= NA chr19 38663464 38730536 38663464 38730536 + transcript4128.chr19.nnic@ACTN4 transcript4128.chr19.nnic protein_coding 38663464,38700600,38701002,38704934,38706044,38708117,38709395,38710257,38714469,38717086,38717927,38721538,38723614,38723937,38724157,38724431,38725724,38726957,38727946,38728996,38729274 38663562,38700714,38701121,38705020,38706131,38708195,38709476,38710342,38714561,38717316,38718074,38721688,38723722,38724077,38724339,38724565,38725903,38727103,38728026,38729154,38730536 Gene ID= ENSG00000130402.11 TPM= 37.13 Transcript Type= NA chr19 38836374 38850343 38836374 38850343 - transcript4148.chr19.nic@HNRNPL transcript4148.chr19.nic protein_coding 38849700,38847316,38845853,38845650,38844008,38843842,38841613,38840488,38840096,38838894,38838397,38837594,38837384,38836374 38850343,38847434,38846090,38845735,38844104,38843914,38841682,38840559,38840376,38839015,38838598,38837651,38837479,38836780 Gene ID= ENSG00000104824.16 TPM= 61.88 Transcript Type= NA chr19 38836374 38849940 38836374 38849940 - transcript4155.chr19.nic@HNRNPL transcript4155.chr19.nic protein_coding 38849700,38847316,38845853,38845650,38844008,38843842,38840096,38838894,38838397,38837594,38837384,38836374 38849940,38847434,38846090,38845735,38844104,38843914,38840559,38839015,38838598,38837651,38837479,38836780 Gene ID= ENSG00000104824.16 TPM= 59.16 Transcript Type= NA chr19 38842122 38850343 38842122 38850343 - transcript4157.chr19.nic@HNRNPL transcript4157.chr19.nic protein_coding 38849700,38847316,38845853,38845650,38844008,38842122 38850343,38847434,38846090,38845735,38844104,38843914 Gene ID= ENSG00000104824.16 TPM= 21.73 Transcript Type= NA chr19 38836395 38852347 38836395 38852347 - ENST00000388749.7@HNRNPL ENST00000388749.7 protein_coding 38852296,38847316,38845853,38845650,38844008,38843842,38841613,38840488,38840096,38838894,38838397,38837594,38837384,38836395 38852347,38847434,38846090,38845735,38844104,38843914,38841682,38840559,38840376,38839015,38838598,38837651,38837479,38836780 Gene ID= ENSG00000104824.16 TPM= 55.54 Transcript Type= nonsense_mediated_decay chr19 38878557 38899823 38878557 38899823 - ENST00000249396.11@SIRT2 ENST00000249396.11 protein_coding 38899506,38898379,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557 38899823,38898425,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310 Gene ID= ENSG00000068903.19 TPM= 25.96 Transcript Type= protein_coding chr19 38878557 38899862 38878557 38899862 - ENST00000392081.6@SIRT2 ENST00000392081.6 protein_coding 38899506,38893819,38893414,38890103,38889855,38889689,38889087,38883627,38881432,38881100,38880821,38880685,38879632,38879434,38878557 38899862,38893867,38893527,38890144,38889961,38889745,38889155,38883756,38881491,38881155,38880897,38880736,38879702,38879500,38879310 Gene ID= ENSG00000068903.19 TPM= 106.56 Transcript Type= protein_coding chr19 38899952 38908538 38899952 38908538 + ENST00000572515.5@NFKBIB ENST00000572515.5 protein_coding 38899952,38905015,38905202,38907221,38907399 38900211,38905120,38905535,38907309,38908538 Gene ID= ENSG00000104825.16 TPM= 13.13 Transcript Type= protein_coding chr19 38899980 38908893 38899980 38908893 + ENST00000509705.3@NFKBIB ENST00000509705.3 protein_coding 38899980,38905071,38905202,38907221,38907399 38900211,38905120,38905535,38907309,38908893 Gene ID= ENSG00000104825.16 TPM= 9.51 Transcript Type= nonsense_mediated_decay chr19 38899999 38908886 38899999 38908886 + ENST00000313582.5@NFKBIB ENST00000313582.5 protein_coding 38899999,38905015,38905202,38907221,38907399,38908731 38900211,38905120,38905535,38907309,38907659,38908886 Gene ID= ENSG00000104825.16 TPM= 14.49 Transcript Type= protein_coding chr19 38915266 38930896 38915266 38930896 - ENST00000221431.10@SARS2 ENST00000221431.10 protein_coding 38930470,38926205,38922238,38921527,38921392,38920086,38919762,38918766,38918422,38918094,38917921,38917724,38916221,38916037,38915841,38915266 38930896,38926300,38922267,38921667,38921446,38920149,38919867,38918813,38918530,38918139,38918008,38917833,38916314,38916129,38915906,38915749 Gene ID= ENSG00000104835.14 TPM= 67.01 Transcript Type= protein_coding chr19 38915262 38930777 38915262 38930777 - transcript4185.chr19.nic@SARS2 transcript4185.chr19.nic protein_coding 38930470,38926205,38921527,38921392,38920086,38919762,38918766,38918422,38918094,38917921,38917724,38916221,38916037,38915841,38915262 38930777,38926300,38922267,38921446,38920149,38919867,38918813,38918530,38918139,38918008,38917833,38916314,38916129,38915906,38915749 Gene ID= ENSG00000104835.14 TPM= 3.62 Transcript Type= NA chr19 38930548 38933020 38930548 38933020 + ENST00000308018.8@MRPS12 ENST00000308018.8 protein_coding 38930548,38931276,38932333 38930998,38931343,38933020 Gene ID= ENSG00000128626.11 TPM= 44.37 Transcript Type= protein_coding chr19 38930999 38933020 38930999 38933020 + ENST00000402029.3@MRPS12 ENST00000402029.3 protein_coding 38930999,38931276,38932333 38931171,38931343,38933020 Gene ID= ENSG00000128626.11 TPM= 10.87 Transcript Type= protein_coding chr19 39024025 39032285 39024025 39032285 - transcript4197.chr19.nic@FBXO27 transcript4197.chr19.nic protein_coding 39031864,39031209,39031029,39026870,39024025 39032285,39031320,39031124,39027005,39025554 Gene ID= ENSG00000161243.8 TPM= 3.62 Transcript Type= NA chr19 39125738 39179405 39125738 39179405 + transcript4202.chr19.nic@PAK4 transcript4202.chr19.nic protein_coding 39125738,39168230,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424 39125919,39168302,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179405 Gene ID= ENSG00000130669.17 TPM= 36.52 Transcript Type= NA chr19 39125802 39179402 39125802 39179402 + ENST00000358301.7@PAK4 ENST00000358301.7 protein_coding 39125802,39169532,39172918,39173576,39174931,39175312,39176590,39177675,39178424 39125919,39169757,39173376,39174010,39175064,39175438,39176715,39177809,39179402 Gene ID= ENSG00000130669.17 TPM= 8.45 Transcript Type= protein_coding chr19 39306569 39320873 39306569 39320873 - transcript4213.chr19.nic@AC011445.1 transcript4213.chr19.nic sense_overlapping 39320793,39318326,39316082,39313931,39306569 39320873,39318358,39316136,39315373,39308542 Gene ID= ENSG00000268262.1 TPM= 3.62 Transcript Type= NA chr19 39328359 39336006 39328359 39336006 - ENST00000598034.5@GMFG ENST00000598034.5 protein_coding 39335974,39335435,39335261,39333077,39329544,39328359 39336006,39335531,39335310,39333126,39329626,39329073 Gene ID= ENSG00000130755.12 TPM= 1.81 Transcript Type= protein_coding chr19 39342425 39385671 39342425 39385671 + transcript4214.chr19.nnic@SAMD4B transcript4214.chr19.nnic protein_coding 39342425,39354006,39355055,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499 39342576,39354066,39355150,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39385671 Gene ID= ENSG00000179134.15 TPM= 13.07 Transcript Type= NA chr19 39342437 39385671 39342437 39385671 + transcript4216.chr19.nnic@SAMD4B transcript4216.chr19.nnic protein_coding 39342437,39348288,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499 39342576,39348389,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39385671 Gene ID= ENSG00000179134.15 TPM= 9.44 Transcript Type= NA chr19 39342425 39385671 39342425 39385671 + transcript4222.chr19.nic@SAMD4B transcript4222.chr19.nic protein_coding 39342425,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499 39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39385671 Gene ID= ENSG00000179134.15 TPM= 40.23 Transcript Type= NA chr19 39342425 39385671 39342425 39385671 + transcript4223.chr19.nic@SAMD4B transcript4223.chr19.nic protein_coding 39342425,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383708 39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39385671 Gene ID= ENSG00000179134.15 TPM= 3.92 Transcript Type= NA chr19 39342422 39385671 39342422 39385671 + transcript4225.chr19.nic@SAMD4B transcript4225.chr19.nic protein_coding 39342422,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208,39383499 39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39383291,39385671 Gene ID= ENSG00000179134.15 TPM= 13.97 Transcript Type= NA chr19 39342425 39385671 39342425 39385671 + transcript4228.chr19.nic@SAMD4B transcript4228.chr19.nic protein_coding 39342425,39354006,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208 39342576,39354066,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39385671 Gene ID= ENSG00000179134.15 TPM= 8.38 Transcript Type= NA chr19 39342422 39385671 39342422 39385671 + transcript4230.chr19.nic@SAMD4B transcript4230.chr19.nic protein_coding 39342422,39356689,39369655,39375650,39376437,39376705,39377485,39378504,39379966,39380587,39380990,39383208 39342576,39357089,39370125,39375889,39376546,39376791,39377824,39378589,39380084,39380785,39381113,39385671 Gene ID= ENSG00000179134.15 TPM= 6.57 Transcript Type= NA chr19 39385635 39409726 39385635 39409726 - transcript4220.chr19.nnic@PAF1 transcript4220.chr19.nnic protein_coding 39409519,39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388947,39388762,39388560,39388339,39386694,39386482,39385635 39409726,39391189,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388865,39388676,39388467,39386799,39386572,39386403 Gene ID= ENSG00000006712.14 TPM= 8.6 Transcript Type= NA chr19 39385852 39391195 39385852 39391195 - ENST00000221265.7@PAF1 ENST00000221265.7 protein_coding 39390818,39390260,39390069,39389640,39389480,39389282,39389093,39388947,39388762,39388560,39388339,39386694,39386482,39385852 39391195,39390289,39390161,39389761,39389546,39389383,39389198,39389015,39388865,39388676,39388467,39386799,39386572,39386403 Gene ID= ENSG00000006712.14 TPM= 112.74 Transcript Type= protein_coding chr19 39391311 39400637 39391311 39400637 + ENST00000315588.9@MED29 ENST00000315588.9 protein_coding 39391311,39392464,39393553,39397457 39391638,39392522,39393637,39400637 Gene ID= ENSG00000063322.13 TPM= 72.44 Transcript Type= protein_coding chr19 39406813 39409412 39406813 39409412 + ENST00000597629.1@ZFP36 ENST00000597629.1 protein_coding 39406813,39407743 39406928,39409412 Gene ID= ENSG00000128016.5 TPM= 301.55 Transcript Type= protein_coding chr19 39413794 39425583 39413794 39425583 + transcript4243.chr19.nic@PLEKHG2 transcript4243.chr19.nic protein_coding 39413794,39414992,39415339,39416348,39416551,39416850,39417555,39417905,39418734,39418917,39420626,39420751,39420949,39421075,39421283,39422115,39422732,39423733 39414195,39415260,39415439,39416414,39416597,39417000,39417692,39418105,39418826,39419003,39420659,39420852,39420996,39421113,39421299,39422288,39423653,39425583 Gene ID= ENSG00000090924.14 TPM= 3.62 Transcript Type= NA chr19 39433217 39435941 39433217 39435941 - ENST00000601655.5@RPS16 ENST00000601655.5 protein_coding 39435848,39435658,39433665,39433522,39433217 39435941,39435708,39433761,39433569,39433418 Gene ID= ENSG00000105193.8 TPM= 14.04 Transcript Type= protein_coding chr19 39433207 39435948 39433207 39435948 - ENST00000251453.7@RPS16 ENST00000251453.7 protein_coding 39435848,39435607,39433665,39433522,39433207 39435948,39435708,39433761,39433569,39433418 Gene ID= ENSG00000105193.8 TPM= 369.92 Transcript Type= protein_coding chr19 39433223 39435948 39433223 39435948 - ENST00000601390.1@RPS16 ENST00000601390.1 protein_coding 39435848,39433665,39433522,39433223 39435948,39435708,39433569,39433418 Gene ID= ENSG00000105193.8 TPM= 5.43 Transcript Type= retained_intron chr19 39445576 39476668 39445576 39476668 + transcript4252.chr19.nic@SUPT5H transcript4252.chr19.nic protein_coding 39445576,39445882,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256 39445637,39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476668 Gene ID= ENSG00000196235.13 TPM= 18.07 Transcript Type= NA chr19 39445546 39476666 39445546 39476666 + ENST00000402194.6@SUPT5H ENST00000402194.6 protein_coding 39445546,39445804,39453356,39457675,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256 39445637,39445965,39453521,39457740,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476666 Gene ID= ENSG00000196235.13 TPM= 16.25 Transcript Type= protein_coding chr19 39445644 39476670 39445644 39476670 + ENST00000359191.10@SUPT5H ENST00000359191.10 protein_coding 39445644,39453356,39457675,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256 39445965,39453521,39457740,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670 Gene ID= ENSG00000196235.13 TPM= 11.73 Transcript Type= protein_coding chr19 39445684 39476670 39445684 39476670 + ENST00000598725.5@SUPT5H ENST00000598725.5 protein_coding 39445684,39453356,39457675,39458294,39458818,39459005,39459184,39459559,39459892,39464798,39466480,39466675,39468756,39469079,39469262,39470119,39470377,39471357,39471605,39472409,39472810,39473012,39473203,39473416,39473963,39474234,39474515,39476081,39476256 39445965,39453521,39457740,39458305,39458887,39459073,39459249,39459589,39459960,39465049,39466569,39466745,39468861,39469172,39469398,39470274,39470523,39471503,39471730,39472493,39472929,39473114,39473330,39473521,39474121,39474402,39474718,39476176,39476670 Gene ID= ENSG00000196235.13 TPM= 23.5 Transcript Type= protein_coding chr19 39825346 39833626 39825346 39833626 - transcript4274.chr19.nic@DYRK1B transcript4274.chr19.nic protein_coding 39833267,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825346 39833626,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826867,39826286,39826086 Gene ID= ENSG00000105204.13 TPM= 6.11 Transcript Type= NA chr19 39825346 39833644 39825346 39833644 - transcript4276.chr19.nnic@DYRK1B transcript4276.chr19.nnic protein_coding 39832972,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825346 39833644,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086 Gene ID= ENSG00000105204.13 TPM= 3.4 Transcript Type= NA chr19 39825350 39833634 39825350 39833634 - ENST00000593685.5@DYRK1B ENST00000593685.5 protein_coding 39833267,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350 39833634,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086 Gene ID= ENSG00000105204.13 TPM= 4.3 Transcript Type= protein_coding chr19 39825350 39834201 39825350 39834201 - ENST00000323039.9@DYRK1B ENST00000323039.9 protein_coding 39834023,39831805,39830664,39830375,39829880,39828297,39827510,39827285,39826672,39826180,39825350 39834201,39831968,39830783,39830563,39830027,39828583,39827656,39827425,39826987,39826286,39826086 Gene ID= ENSG00000105204.13 TPM= 21.51 Transcript Type= protein_coding chr19 39834458 39846414 39834458 39846414 - ENST00000221801.7@FBL ENST00000221801.7 protein_coding 39846291,39840617,39840414,39840233,39839035,39837711,39836556,39834668,39834458 39846414,39840787,39840515,39840327,39839205,39837843,39836668,39834813,39834562 Gene ID= ENSG00000105202.8 TPM= 54.33 Transcript Type= protein_coding chr19 39863323 39906323 39863323 39906323 - ENST00000616721.5@FCGBP ENST00000616721.5 protein_coding 39905731,39902243,39901925,39899556,39895806,39893922,39892911,39891643,39889479,39885991,39885673,39883305,39879555,39877663,39876658,39875388,39873224,39872078,39870216,39866737,39863621,39863323 39906323,39902837,39902124,39899697,39896143,39894495,39893527,39892186,39890071,39886585,39885872,39883446,39879892,39878236,39877274,39875931,39873795,39872651,39870415,39867120,39863892,39863496 Gene ID= ENSG00000275395.5 TPM= 63.39 Transcript Type= protein_coding chr19 39971005 39981441 39971005 39981441 + ENST00000157812.6@PSMC4 ENST00000157812.6 protein_coding 39971005,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192 39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441 Gene ID= ENSG00000013275.7 TPM= 94.63 Transcript Type= protein_coding chr19 39971170 39981408 39971170 39981408 + ENST00000593455.5@PSMC4 ENST00000593455.5 protein_coding 39971170,39972146,39972369,39974294,39974524,39974735,39979817,39980070,39980662,39981192 39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980454,39980717,39981408 Gene ID= ENSG00000013275.7 TPM= 3.62 Transcript Type= retained_intron chr19 39971170 39981441 39971170 39981441 + ENST00000455878.2@PSMC4 ENST00000455878.2 protein_coding 39971170,39972146,39972462,39974294,39974524,39974735,39979817,39980070,39980286,39980662,39981192 39971238,39972244,39972555,39974440,39974633,39974828,39979984,39980146,39980454,39980717,39981441 Gene ID= ENSG00000013275.7 TPM= 1.36 Transcript Type= protein_coding chr19 40230317 40285395 40230317 40285395 - ENST00000392038.6@AKT2 ENST00000392038.6 protein_coding 40285181,40265222,40256926,40255158,40242534,40241938,40240045,40238905,40237969,40236257,40235890,40235263,40235045,40230317 40285395,40265351,40257054,40255269,40242687,40242069,40240110,40238973,40238091,40236385,40236104,40235350,40235147,40233951 Gene ID= ENSG00000105221.16 TPM= 13.58 Transcript Type= protein_coding chr19 40321062 40348399 40321062 40348399 - transcript4355.chr19.nnic@C19orf47 transcript4355.chr19.nnic protein_coding 40348324,40347189,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40321062 40348399,40347311,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376 Gene ID= ENSG00000160392.13 TPM= 2.34 Transcript Type= NA chr19 40321062 40348420 40321062 40348420 - transcript4361.chr19.nic@C19orf47 transcript4361.chr19.nic protein_coding 40348324,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40321062 40348420,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376 Gene ID= ENSG00000160392.13 TPM= 5.05 Transcript Type= NA chr19 40319536 40348527 40319536 40348527 - ENST00000582783.5@C19orf47 ENST00000582783.5 protein_coding 40348437,40341839,40336320,40336110,40333851,40328413,40326334,40324006,40319536 40348527,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376 Gene ID= ENSG00000160392.13 TPM= 1.43 Transcript Type= protein_coding chr19 40321063 40348386 40321063 40348386 - ENST00000392035.6@C19orf47 ENST00000392035.6 protein_coding 40348324,40341786,40336320,40336110,40333851,40328413,40326334,40324006,40321063 40348386,40341890,40336407,40336224,40333929,40328550,40326486,40324076,40322376 Gene ID= ENSG00000160392.13 TPM= 2.94 Transcript Type= protein_coding chr19 40348674 40378490 40348674 40378490 + transcript4324.chr19.nic@PLD3 transcript4324.chr19.nic protein_coding 40348674,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348768,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378490 Gene ID= ENSG00000105223.19 TPM= 46.39 Transcript Type= NA chr19 40348570 40378490 40348570 40378490 + transcript4328.chr19.nic@PLD3 transcript4328.chr19.nic protein_coding 40348570,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378490 Gene ID= ENSG00000105223.19 TPM= 207.55 Transcript Type= NA chr19 40348609 40378490 40348609 40378490 + transcript4332.chr19.nic@PLD3 transcript4332.chr19.nic protein_coding 40348609,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348724,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378490 Gene ID= ENSG00000105223.19 TPM= 76.25 Transcript Type= NA chr19 40348690 40378483 40348690 40378483 + ENST00000409735.8@PLD3 ENST00000409735.8 protein_coding 40348690,40365718,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483 Gene ID= ENSG00000105223.19 TPM= 168.3 Transcript Type= protein_coding chr19 40348700 40378483 40348700 40378483 + ENST00000356508.9@PLD3 ENST00000356508.9 protein_coding 40348700,40365553,40366419,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348724,40365585,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483 Gene ID= ENSG00000105223.19 TPM= 143.09 Transcript Type= protein_coding chr19 40348685 40378483 40348685 40378483 + ENST00000409587.5@PLD3 ENST00000409587.5 protein_coding 40348685,40365718,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348768,40365930,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378483 Gene ID= ENSG00000105223.19 TPM= 18.13 Transcript Type= protein_coding chr19 40348678 40378475 40348678 40378475 + ENST00000409419.5@PLD3 ENST00000409419.5 protein_coding 40348678,40366384,40366610,40366773,40367696,40369908,40370110,40371673,40374481,40376609,40377786,40377986 40348768,40366510,40366684,40366915,40367879,40370028,40370237,40371873,40374620,40376774,40377885,40378475 Gene ID= ENSG00000105223.19 TPM= 6.09 Transcript Type= protein_coding chr19 40393766 40404333 40393766 40404333 - transcript4371.chr19.nic@PRX transcript4371.chr19.nic protein_coding 40403706,40398620,40393766 40404333,40398816,40397970 Gene ID= ENSG00000105227.14 TPM= 12.68 Transcript Type= NA chr19 40393768 40413366 40393768 40413366 - ENST00000324001.7@PRX ENST00000324001.7 protein_coding 40413338,40408340,40408158,40407906,40403706,40398620,40393768 40413366,40408383,40408256,40408031,40403862,40398816,40397970 Gene ID= ENSG00000105227.14 TPM= 6.34 Transcript Type= protein_coding chr19 40421592 40426025 40421592 40426025 - ENST00000357949.4@SERTAD1 ENST00000357949.4 protein_coding 40425867,40421592 40426025,40423546 Gene ID= ENSG00000197019.4 TPM= 28.98 Transcript Type= protein_coding chr19 40440844 40444705 40440844 40444705 - ENST00000322354.3@SERTAD3 ENST00000322354.3 protein_coding 40444215,40440844 40444705,40442086 Gene ID= ENSG00000167565.12 TPM= 18.11 Transcript Type= protein_coding chr19 40447789 40465840 40447789 40465840 - ENST00000263368.8@BLVRB ENST00000263368.8 protein_coding 40465610,40458381,40458155,40451364,40447789 40465840,40458545,40458244,40451492,40448046 Gene ID= ENSG00000090013.9 TPM= 118.63 Transcript Type= protein_coding chr19 40530491 40576464 40530491 40576464 + transcript4384.chr19.nic@SPTBN4 transcript4384.chr19.nic protein_coding 40530491,40532625,40534080,40549189,40550238,40554147,40554516,40556084,40557023,40560159,40565423,40565661,40566163,40567663,40569657,40570436,40572019,40572338,40575411 40530590,40532771,40534343,40549413,40550327,40554425,40554646,40556288,40557403,40560403,40565561,40565745,40566359,40568282,40569726,40570728,40572192,40572380,40576464 Gene ID= ENSG00000160460.15 TPM= 2.72 Transcript Type= NA chr19 40576844 40591397 40576844 40591397 + transcript4391.chr19.nic@SHKBP1 transcript4391.chr19.nic protein_coding 40576844,40577231,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976 40576985,40577284,40577441,40577709,40578212,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397 Gene ID= ENSG00000160410.14 TPM= 4.66 Transcript Type= NA chr19 40577145 40591397 40577145 40591397 + transcript4398.chr19.nic@SHKBP1 transcript4398.chr19.nic protein_coding 40577145,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976 40577284,40577441,40577630,40578212,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397 Gene ID= ENSG00000160410.14 TPM= 6.93 Transcript Type= NA chr19 40576851 40591397 40576851 40591397 + ENST00000291842.9@SHKBP1 ENST00000291842.9 protein_coding 40576851,40577231,40577396,40577557,40578154,40578462,40580324,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976 40576985,40577284,40577441,40577630,40578212,40578542,40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591397 Gene ID= ENSG00000160410.14 TPM= 136.42 Transcript Type= protein_coding chr19 40580167 40591395 40580167 40591395 + ENST00000598201.5@SHKBP1 ENST00000598201.5 protein_coding 40580167,40580566,40580746,40582351,40583398,40583601,40586774,40588624,40589082,40590244,40590730,40590976 40580485,40580656,40580936,40582466,40583485,40583717,40586944,40588779,40589178,40590422,40590853,40591395 Gene ID= ENSG00000160410.14 TPM= 1.95 Transcript Type= retained_intron chr19 40601326 40629820 40601326 40629820 + transcript4414.chr19.nic@LTBP4 transcript4414.chr19.nic protein_coding 40601326,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40616889,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396 40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617020,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629820 Gene ID= ENSG00000090006.17 TPM= 10.91 Transcript Type= NA chr19 40601326 40629820 40601326 40629820 + transcript4415.chr19.nic@LTBP4 transcript4415.chr19.nic protein_coding 40601326,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40617100,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396 40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617225,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629820 Gene ID= ENSG00000090006.17 TPM= 16.2 Transcript Type= NA chr19 40601326 40629820 40601326 40629820 + transcript4418.chr19.nic@LTBP4 transcript4418.chr19.nic protein_coding 40601326,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40616889,40617100,40619347,40623604,40623936,40625857,40626975,40627705,40629396 40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40617020,40617225,40619493,40623732,40624082,40626009,40627355,40627857,40629820 Gene ID= ENSG00000090006.17 TPM= 4.18 Transcript Type= NA chr19 40601326 40629820 40601326 40629820 + transcript4420.chr19.nic@LTBP4 transcript4420.chr19.nic protein_coding 40601326,40605035,40605405,40605729,40606233,40606404,40607365,40608220,40608484,40609530,40609746,40610532,40611152,40611859,40612073,40613065,40613404,40613916,40614315,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396 40601637,40605226,40605652,40605831,40606307,40606526,40607529,40608369,40608603,40609661,40609871,40610657,40611394,40611984,40612192,40613196,40613529,40614038,40614446,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629820 Gene ID= ENSG00000090006.17 TPM= 12.72 Transcript Type= NA chr19 40613375 40629820 40613375 40629820 + transcript4430.chr19.nic@LTBP4 transcript4430.chr19.nic protein_coding 40613375,40613916,40614315,40616889,40617100,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396 40613529,40614038,40614446,40617020,40617225,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629820 Gene ID= ENSG00000090006.17 TPM= 7.67 Transcript Type= NA chr19 40613375 40629820 40613375 40629820 + transcript4431.chr19.nic@LTBP4 transcript4431.chr19.nic protein_coding 40613375,40613916,40614315,40617100,40619347,40622401,40622950,40623604,40623936,40625857,40626975,40627705,40629396 40613529,40614038,40614446,40617225,40619493,40622667,40623021,40623732,40624082,40626009,40627355,40627857,40629820 Gene ID= ENSG00000090006.17 TPM= 7.22 Transcript Type= NA chr19 40665905 40690651 40665905 40690651 - ENST00000252891.8@NUMBL ENST00000252891.8 protein_coding 40690460,40686911,40684417,40682894,40682728,40680917,40677232,40673344,40669898,40665905 40690651,40686995,40684556,40682968,40682802,40681057,40677421,40673649,40670020,40668138 Gene ID= ENSG00000105245.9 TPM= 9.96 Transcript Type= protein_coding chr19 40691527 40715112 40691527 40715112 - transcript4443.chr19.nic@COQ8B transcript4443.chr19.nic protein_coding 40715033,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40715112,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 3.78 Transcript Type= NA chr19 40691527 40715830 40691527 40715830 - transcript4449.chr19.nnic@COQ8B transcript4449.chr19.nnic protein_coding 40715707,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40715830,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 13.74 Transcript Type= NA chr19 40691527 40716925 40691527 40716925 - transcript4451.chr19.nic@COQ8B transcript4451.chr19.nic protein_coding 40716862,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40716925,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 14.64 Transcript Type= NA chr19 40691527 40715113 40691527 40715113 - transcript4455.chr19.nic@COQ8B transcript4455.chr19.nic protein_coding 40715057,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40715113,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 2.87 Transcript Type= NA chr19 40691527 40716920 40691527 40716920 - transcript4458.chr19.nnic@COQ8B transcript4458.chr19.nnic protein_coding 40716862,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40716920,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 3.78 Transcript Type= NA chr19 40691527 40715775 40691527 40715775 - transcript4466.chr19.nnic@COQ8B transcript4466.chr19.nnic protein_coding 40715707,40714531,40714278,40714067,40710059,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40715775,40714635,40714397,40714133,40710136,40705447,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 4.68 Transcript Type= NA chr19 40691527 40716925 40691527 40716925 - transcript4468.chr19.nic@COQ8B transcript4468.chr19.nic protein_coding 40716862,40714531,40714278,40714067,40710059,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691527 40716925,40714635,40714397,40714133,40710136,40705447,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 4.68 Transcript Type= NA chr19 40691529 40716885 40691529 40716885 - ENST00000324464.7@COQ8B ENST00000324464.7 protein_coding 40716587,40714531,40714278,40714067,40710059,40705325,40705096,40703715,40703541,40702600,40700310,40700067,40695989,40692951,40691529 40716885,40714635,40714397,40714133,40710136,40705447,40705181,40703855,40703622,40702693,40700451,40700174,40696054,40693037,40692373 Gene ID= ENSG00000123815.11 TPM= 7.4 Transcript Type= protein_coding chr19 40717011 40740859 40717011 40740859 + transcript4479.chr19.nnic@ITPKC transcript4479.chr19.nnic protein_coding 40717011,40725340,40729202,40733160,40736986,40737698,40739357,40739950 40718290,40725439,40729415,40733364,40737087,40737769,40739736,40740859 Gene ID= ENSG00000086544.2 TPM= 2.72 Transcript Type= NA chr19 40716957 40739116 40716957 40739116 + transcript4487.chr19.nic@ITPKC transcript4487.chr19.nic protein_coding 40716957,40725340,40729202,40733160,40736986,40737698 40718290,40725439,40729415,40733364,40737087,40739116 Gene ID= ENSG00000086544.2 TPM= 5.43 Transcript Type= NA chr19 40717103 40740860 40717103 40740860 + ENST00000263370.2@ITPKC ENST00000263370.2 protein_coding 40717103,40725340,40729202,40733160,40736986,40737698,40739357 40718290,40725439,40729415,40733364,40737087,40737769,40740860 Gene ID= ENSG00000086544.2 TPM= 61.58 Transcript Type= protein_coding chr19 40740858 40750469 40740858 40750469 - transcript4475.chr19.nnic@C19orf54 transcript4475.chr19.nnic protein_coding 40749481,40745130,40744559,40744067,40743915,40742515,40742073,40741694,40740858 40750469,40745198,40744683,40744196,40743975,40742770,40742189,40741864,40741439 Gene ID= ENSG00000188493.14 TPM= 1.81 Transcript Type= NA chr19 40740862 40750449 40740862 40750449 - transcript4485.chr19.nic@C19orf54 transcript4485.chr19.nic protein_coding 40750285,40749481,40745130,40744559,40744067,40743915,40740862 40750449,40749607,40745198,40744683,40744196,40743975,40742770 Gene ID= ENSG00000188493.14 TPM= 1.81 Transcript Type= NA chr19 40740856 40750492 40740856 40750492 - ENST00000470681.5@C19orf54 ENST00000470681.5 protein_coding 40750285,40749481,40745130,40744559,40743905,40740856 40750492,40749607,40745198,40744683,40743981,40742770 Gene ID= ENSG00000188493.14 TPM= 2.72 Transcript Type= protein_coding chr19 40750859 40765389 40750859 40765389 + ENST00000243563.7@SNRPA ENST00000243563.7 protein_coding 40750859,40757332,40759431,40762901,40763587,40765008 40751481,40757504,40759610,40763074,40763675,40765389 Gene ID= ENSG00000077312.8 TPM= 26.26 Transcript Type= protein_coding chr19 40778266 40796935 40778266 40796935 + ENST00000357052.7@RAB4B ENST00000357052.7 protein_coding 40778266,40780019,40780385,40783778,40783921,40786665,40786848,40796570 40778391,40780099,40780499,40783840,40784075,40786760,40786978,40796935 Gene ID= ENSG00000167578.17 TPM= 73.05 Transcript Type= protein_coding chr19 40799791 40808444 40799791 40808444 + transcript4513.chr19.nic@EGLN2 transcript4513.chr19.nic protein_coding 40799791,40800339,40806555,40807138,40807484,40807809 40799830,40801415,40806674,40807274,40807551,40808444 Gene ID= ENSG00000269858.5 TPM= 14.79 Transcript Type= NA chr19 40799187 40808432 40799187 40808432 + ENST00000303961.8@EGLN2 ENST00000303961.8 protein_coding 40799187,40800339,40806555,40807138,40807484,40807809 40799262,40801415,40806674,40807274,40807551,40808432 Gene ID= ENSG00000269858.5 TPM= 234.84 Transcript Type= protein_coding chr19 40799515 40808432 40799515 40808432 + ENST00000406058.6@EGLN2 ENST00000406058.6 protein_coding 40799515,40800339,40806555,40807138,40807484,40807809 40799638,40801415,40806674,40807274,40807551,40808432 Gene ID= ENSG00000269858.5 TPM= 6.64 Transcript Type= protein_coding chr19 40808474 40811097 40808474 40811097 - ENST00000641596.1@CYP2T1P ENST00000641596.1 transcribed_unitary_pseudogene 40810585,40808474 40811097,40810495 Gene ID= ENSG00000233622.2 TPM= 5.43 Transcript Type= processed_transcript chr19 41193049 41207539 41193049 41207539 + ENST00000310054.8@CYP2S1 ENST00000310054.8 protein_coding 41193049,41194544,41197779,41198462,41198709,41201231,41203450,41205958,41206280 41193441,41194709,41197928,41198622,41198888,41201372,41203637,41206099,41207539 Gene ID= ENSG00000167600.13 TPM= 6.34 Transcript Type= protein_coding chr19 41219203 41261766 41219203 41261766 + ENST00000301178.8@AXL ENST00000301178.8 protein_coding 41219203,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41239694,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553 41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41239720,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41261766 Gene ID= ENSG00000167601.11 TPM= 38.03 Transcript Type= protein_coding chr19 41219235 41260294 41219235 41260294 + ENST00000359092.7@AXL ENST00000359092.7 protein_coding 41219235,41220636,41221146,41221880,41230967,41231183,41237944,41238470,41239164,41242883,41243616,41248514,41248743,41252351,41252846,41253599,41256452,41257493,41259553 41219477,41220858,41221246,41222056,41231047,41231298,41238154,41238609,41239314,41243015,41243707,41248609,41248820,41252443,41252967,41253708,41256611,41257629,41260294 Gene ID= ENSG00000167601.11 TPM= 2.72 Transcript Type= protein_coding chr19 41264188 41307690 41264188 41307690 + transcript4535.chr19.nic@HNRNPUL1 transcript4535.chr19.nic protein_coding 41264188,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305646,41306449 41264798,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307690 Gene ID= ENSG00000105323.16 TPM= 15.6 Transcript Type= NA chr19 41265008 41307690 41265008 41307690 + transcript4540.chr19.nic@HNRNPUL1 transcript4540.chr19.nic protein_coding 41265008,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449 41265121,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307690 Gene ID= ENSG00000105323.16 TPM= 12.66 Transcript Type= NA chr19 41262519 41307019 41262519 41307019 + ENST00000595018.5@HNRNPUL1 ENST00000595018.5 protein_coding 41262519,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449 41262582,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307019 Gene ID= ENSG00000105323.16 TPM= 2.85 Transcript Type= protein_coding chr19 41264331 41307376 41264331 41307376 + ENST00000392006.7@HNRNPUL1 ENST00000392006.7 protein_coding 41264331,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449 41264798,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307376 Gene ID= ENSG00000105323.16 TPM= 49.33 Transcript Type= protein_coding chr19 41264411 41307050 41264411 41307050 + ENST00000595196.5@HNRNPUL1 ENST00000595196.5 protein_coding 41264411,41268223,41272082,41273982,41276159,41279077,41281163,41292245,41294338,41294558,41301536,41302665,41303972,41305676,41306449 41264692,41268345,41272235,41274055,41276298,41279176,41281275,41292511,41294460,41294686,41301704,41302949,41304261,41305867,41307050 Gene ID= ENSG00000105323.16 TPM= 2.85 Transcript Type= nonsense_mediated_decay chr19 41310189 41324883 41310189 41324883 + ENST00000269967.3@CCDC97 ENST00000269967.3 protein_coding 41310189,41316384,41319574,41320341,41322595 41310356,41316839,41319852,41320470,41324883 Gene ID= ENSG00000142039.3 TPM= 29.88 Transcript Type= protein_coding chr19 41376224 41384083 41376224 41384083 + ENST00000392002.6@TMEM91 ENST00000392002.6 protein_coding 41376224,41378281,41382772,41383715 41376854,41378519,41382921,41384083 Gene ID= ENSG00000142046.14 TPM= 1.81 Transcript Type= protein_coding chr19 41354421 41364173 41354421 41364173 - ENST00000243578.7@B9D2 ENST00000243578.7 protein_coding 41363958,41363432,41357897,41354421 41364173,41363523,41358022,41355013 Gene ID= ENSG00000123810.7 TPM= 11.77 Transcript Type= protein_coding chr19 41386374 41397479 41386374 41397479 - ENST00000221233.8@EXOSC5 ENST00000221233.8 protein_coding 41397181,41392867,41391841,41389765,41387514,41386374 41397479,41392980,41391962,41389905,41387603,41386725 Gene ID= ENSG00000077348.8 TPM= 27.17 Transcript Type= protein_coding chr19 41397460 41425005 41397460 41425005 + ENST00000269980.6@BCKDHA ENST00000269980.6 protein_coding 41397460,41410637,41410923,41414049,41419135,41422164,41422629,41422998,41424438 41397935,41410816,41411009,41414157,41419296,41422370,41422770,41423169,41425005 Gene ID= ENSG00000248098.11 TPM= 389.84 Transcript Type= protein_coding chr19 41425359 41428730 41425359 41428730 - ENST00000321702.2@B3GNT8 ENST00000321702.2 protein_coding 41428596,41427284,41425359 41428730,41427570,41426810 Gene ID= ENSG00000177191.2 TPM= 2.72 Transcript Type= protein_coding chr19 41431319 41439934 41431319 41439934 - transcript4580.chr19.nic@DMAC2 transcript4580.chr19.nic protein_coding 41439882,41438235,41436392,41433537,41431319 41439934,41438414,41436472,41433673,41432408 Gene ID= ENSG00000105341.18 TPM= 3.32 Transcript Type= NA chr19 41431319 41439934 41431319 41439934 - transcript4581.chr19.nic@DMAC2 transcript4581.chr19.nic protein_coding 41439882,41438218,41436392,41433537,41431319 41439934,41438414,41436472,41433673,41433434 Gene ID= ENSG00000105341.18 TPM= 1.81 Transcript Type= NA chr19 41431319 41439905 41431319 41439905 - ENST00000221943.13@DMAC2 ENST00000221943.13 protein_coding 41439882,41438218,41436392,41433537,41433272,41431319 41439905,41438414,41436472,41433673,41433434,41432408 Gene ID= ENSG00000105341.18 TPM= 49.51 Transcript Type= protein_coding chr19 41431339 41439936 41431339 41439936 - ENST00000592922.6@DMAC2 ENST00000592922.6 protein_coding 41439882,41438218,41433537,41433272,41431339 41439936,41438414,41433673,41433434,41432408 Gene ID= ENSG00000105341.18 TPM= 3.62 Transcript Type= protein_coding chr19 41431318 41439910 41431318 41439910 - ENST00000438807.7@DMAC2 ENST00000438807.7 protein_coding 41439882,41438218,41433537,41431318 41439910,41438414,41433673,41432408 Gene ID= ENSG00000105341.18 TPM= 2.42 Transcript Type= protein_coding chr19 41479128 41500646 41479128 41500646 - transcript4584.chr19.nnic@PCAT19 transcript4584.chr19.nnic lincRNA 41500584,41495302,41479128 41500646,41495427,41479284 Gene ID= ENSG00000267107.6 TPM= 9.96 Transcript Type= NA chr19 41535567 41536904 41535567 41536904 + ENST00000494375.2@LINC01480 ENST00000494375.2 lincRNA 41535567,41535714,41536601 41535601,41535783,41536904 Gene ID= ENSG00000270164.1 TPM= 2.72 Transcript Type= lincRNA chr19 41859918 41872926 41859918 41872926 + ENST00000598742.5@RPS19 ENST00000598742.5 protein_coding 41859918,41860775,41861112,41869031,41869699,41871351 41860289,41860845,41861212,41869214,41869753,41872926 Gene ID= ENSG00000105372.6 TPM= 762.24 Transcript Type= protein_coding chr19 41860446 41871416 41860446 41871416 + ENST00000593863.5@RPS19 ENST00000593863.5 protein_coding 41860446,41860775,41861112,41869031,41869699,41871351 41860494,41860845,41861212,41869214,41869753,41871416 Gene ID= ENSG00000105372.6 TPM= 20.6 Transcript Type= protein_coding chr19 41884283 41907453 41884283 41907453 + transcript4617.chr19.nic@ARHGEF1 transcript4617.chr19.nic protein_coding 41884283,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906703,41907105 41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906803,41907453 Gene ID= ENSG00000076928.17 TPM= 6.34 Transcript Type= NA chr19 41883161 41907443 41883161 41907443 + ENST00000354532.7@ARHGEF1 ENST00000354532.7 protein_coding 41883161,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105 41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907443 Gene ID= ENSG00000076928.17 TPM= 48.01 Transcript Type= protein_coding chr19 41883184 41907448 41883184 41907448 + ENST00000599846.5@ARHGEF1 ENST00000599846.5 protein_coding 41883184,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41897946,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105 41883289,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898113,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907448 Gene ID= ENSG00000076928.17 TPM= 4.18 Transcript Type= protein_coding chr19 41883225 41907454 41883225 41907454 + ENST00000347545.8@ARHGEF1 ENST00000347545.8 protein_coding 41883225,41888064,41888192,41888752,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105 41883289,41888106,41888278,41888865,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907454 Gene ID= ENSG00000076928.17 TPM= 3.19 Transcript Type= protein_coding chr19 41883183 41907454 41883183 41907454 + ENST00000600274.5@ARHGEF1 ENST00000600274.5 protein_coding 41883183,41888064,41888192,41888752,41892025,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105 41883289,41888106,41888278,41888865,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907454 Gene ID= ENSG00000076928.17 TPM= 3.19 Transcript Type= retained_intron chr19 41884448 41907454 41884448 41907454 + ENST00000337665.8@ARHGEF1 ENST00000337665.8 protein_coding 41884448,41888064,41888192,41888752,41892025,41892331,41892603,41893274,41894207,41894451,41894626,41895349,41896377,41898442,41901887,41902274,41902533,41902784,41903307,41903707,41904035,41904216,41904949,41905175,41905760,41905939,41906457,41906703,41907105 41884493,41888106,41888278,41888865,41892123,41892373,41892849,41893303,41894306,41894547,41894661,41895486,41896482,41898587,41902033,41902356,41902658,41902898,41903407,41903784,41904110,41904383,41905036,41905261,41905827,41906025,41906620,41906803,41907454 Gene ID= ENSG00000076928.17 TPM= 12.54 Transcript Type= protein_coding chr19 41956681 41959390 41956681 41959390 - ENST00000222008.10@RABAC1 ENST00000222008.10 protein_coding 41959237,41958736,41958286,41957018,41956681 41959390,41958948,41958383,41957119,41956934 Gene ID= ENSG00000105404.10 TPM= 206.01 Transcript Type= protein_coding chr19 41956681 41959266 41956681 41959266 - ENST00000600292.5@RABAC1 ENST00000600292.5 protein_coding 41959237,41958736,41958286,41957018,41956681 41959266,41958948,41958383,41957119,41956890 Gene ID= ENSG00000105404.10 TPM= 1.36 Transcript Type= protein_coding chr19 42198597 42220134 42198597 42220134 - transcript4631.chr19.nnic@DEDD2 transcript4631.chr19.nnic protein_coding 42220074,42217632,42216680,42215133,42209700,42198597 42220134,42217829,42217045,42215252,42209840,42199829 Gene ID= ENSG00000160570.13 TPM= 28.91 Transcript Type= NA chr19 42198598 42217669 42198598 42217669 - ENST00000336034.8@DEDD2 ENST00000336034.8 protein_coding 42217632,42216680,42215148,42209700,42198598 42217669,42217045,42215252,42209840,42199829 Gene ID= ENSG00000160570.13 TPM= 47.92 Transcript Type= protein_coding chr19 42198616 42217742 42198616 42217742 - ENST00000593804.5@DEDD2 ENST00000593804.5 protein_coding 42217632,42215133,42209700,42198616 42217742,42215252,42209840,42199829 Gene ID= ENSG00000160570.13 TPM= 10.19 Transcript Type= processed_transcript chr19 42198613 42220123 42198613 42220123 - ENST00000595337.5@DEDD2 ENST00000595337.5 protein_coding 42220074,42216680,42215133,42209700,42198613 42220123,42217045,42215252,42209840,42199829 Gene ID= ENSG00000160570.13 TPM= 6.27 Transcript Type= protein_coding chr19 42220271 42228201 42220271 42228201 + ENST00000301215.7@ZNF526 ENST00000301215.7 protein_coding 42220271,42224215,42224387 42220387,42224305,42228201 Gene ID= ENSG00000167625.10 TPM= 19.02 Transcript Type= protein_coding chr19 42230186 42242593 42230186 42242593 - ENST00000222330.7@GSK3A ENST00000222330.7 protein_coding 42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230186 42242593,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867 Gene ID= ENSG00000105723.11 TPM= 82.4 Transcript Type= protein_coding chr19 42230222 42242625 42230222 42242625 - ENST00000453535.1@GSK3A ENST00000453535.1 protein_coding 42242183,42239955,42236858,42236606,42234548,42234353,42233286,42233110,42232496,42232057,42230679,42230222 42242625,42240142,42236941,42236716,42234678,42234459,42233383,42233205,42232682,42232149,42230867,42230391 Gene ID= ENSG00000105723.11 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr19 42268537 42295796 42268537 42295796 + ENST00000572681.6@CIC ENST00000572681.6 protein_coding 42268537,42271774,42286771,42287006,42287320,42287545,42287810,42288888,42289181,42289848,42290233,42291558,42292086,42292300,42292569,42292959,42293592,42293938,42294173,42294604,42294824 42268594,42274577,42286920,42287240,42287449,42287727,42287975,42289090,42289406,42289951,42291466,42291745,42292207,42292466,42292859,42293281,42293836,42294089,42294304,42294735,42295796 Gene ID= ENSG00000079432.7 TPM= 22.64 Transcript Type= protein_coding chr19 42297033 42302777 42297033 42302777 - ENST00000538771.5@PAFAH1B3 ENST00000538771.5 protein_coding 42302437,42302232,42301950,42300171,42299970,42297033 42302777,42302325,42302039,42300287,42300092,42297365 Gene ID= ENSG00000079462.7 TPM= 7.24 Transcript Type= protein_coding chr19 42297033 42302571 42297033 42302571 - ENST00000262890.7@PAFAH1B3 ENST00000262890.7 protein_coding 42302232,42301950,42300171,42299970,42297033 42302571,42302039,42300287,42300092,42297365 Gene ID= ENSG00000079462.7 TPM= 26.26 Transcript Type= protein_coding chr19 42387019 42390287 42387019 42390287 - ENST00000222032.9@CNFN ENST00000222032.9 protein_coding 42390240,42388926,42387340,42387019 42390287,42389039,42387476,42387242 Gene ID= ENSG00000105427.9 TPM= 4.53 Transcript Type= protein_coding chr19 42397128 42408452 42397128 42408452 + ENST00000593491.2@LIPE-AS1 ENST00000593491.2 antisense_RNA 42397128,42408258 42397224,42408452 Gene ID= ENSG00000213904.8 TPM= 5.43 Transcript Type= antisense_RNA chr19 42401507 42424105 42401507 42424105 - transcript4662.chr19.nic@LIPE transcript4662.chr19.nic protein_coding 42423419,42410307,42408232,42407976,42407606,42407174,42406161,42405385,42402607,42401507 42424105,42410842,42408322,42408121,42407791,42407468,42406388,42405561,42403031,42402075 Gene ID= ENSG00000079435.9 TPM= 19.02 Transcript Type= NA chr19 42401507 42423580 42401507 42423580 - transcript4664.chr19.nic@LIPE transcript4664.chr19.nic protein_coding 42423419,42410307,42408232,42407976,42407606,42407174,42405385,42402607,42401507 42423580,42410842,42408322,42408121,42407791,42407468,42405561,42403031,42402075 Gene ID= ENSG00000079435.9 TPM= 4.53 Transcript Type= NA chr19 42507306 42528509 42507306 42528509 - ENST00000161559.10@CEACAM1 ENST00000161559.10 protein_coding 42528311,42527041,42521924,42521267,42518948,42512350,42511576,42510889,42507306 42528509,42527400,42522202,42521521,42519235,42512479,42511628,42510920,42509228 Gene ID= ENSG00000079385.21 TPM= 11.62 Transcript Type= protein_coding chr19 42507314 42528478 42507314 42528478 - ENST00000403444.7@CEACAM1 ENST00000403444.7 protein_coding 42528311,42527041,42521924,42521267,42518948,42512350,42510889,42507314 42528478,42527400,42522202,42521521,42519235,42512479,42510920,42509228 Gene ID= ENSG00000079385.21 TPM= 2.11 Transcript Type= protein_coding chr19 42507304 42528446 42507304 42528446 - ENST00000352591.9@CEACAM1 ENST00000352591.9 protein_coding 42528311,42527041,42521924,42521267,42512350,42511576,42510889,42507304 42528446,42527400,42522202,42521521,42512479,42511628,42510920,42509228 Gene ID= ENSG00000079385.21 TPM= 1.66 Transcript Type= protein_coding chr19 43460787 43465660 43460787 43465660 - ENST00000244333.3@LYPD3 ENST00000244333.3 protein_coding 43465493,43464325,43463599,43463126,43460787 43465660,43464456,43463769,43463287,43461847 Gene ID= ENSG00000124466.8 TPM= 1.81 Transcript Type= protein_coding chr19 43475103 43504935 43475103 43504935 - ENST00000292140.9@PHLDB3 ENST00000292140.9 protein_coding 43504589,43503906,43502101,43501734,43497748,43497118,43495495,43495256,43494702,43487024,43486780,43486609,43486266,43479377,43478047,43475103 43504935,43504132,43502283,43501871,43497876,43497279,43495620,43495339,43494815,43487123,43486870,43486696,43486322,43479593,43478132,43475544 Gene ID= ENSG00000176531.10 TPM= 2.72 Transcript Type= protein_coding chr19 43475104 43504145 43475104 43504145 - transcript4683.chr19.nic@PHLDB3 transcript4683.chr19.nic protein_coding 43503906,43502101,43501734,43497748,43497118,43495495,43495256,43494702,43487024,43486780,43486609,43486266,43479377,43478047,43475104 43504145,43502283,43501871,43497876,43497279,43495605,43495339,43494815,43487123,43486870,43486696,43486322,43479491,43478132,43475544 Gene ID= ENSG00000176531.10 TPM= 2.72 Transcript Type= NA chr19 43475104 43504224 43475104 43504224 - transcript4684.chr19.nic@PHLDB3 transcript4684.chr19.nic protein_coding 43503906,43502101,43501734,43497748,43497118,43495495,43495256,43494702,43487024,43486780,43486609,43486266,43479377,43478047,43475104 43504224,43502283,43501871,43497876,43497279,43495605,43495339,43494815,43487123,43486870,43486696,43486322,43479593,43478132,43475544 Gene ID= ENSG00000176531.10 TPM= 31.69 Transcript Type= NA chr19 43475104 43504149 43475104 43504149 - transcript4687.chr19.nic@PHLDB3 transcript4687.chr19.nic protein_coding 43503906,43502101,43501734,43497748,43497118,43495495,43495256,43494702,43486780,43486609,43486266,43479377,43478047,43475104 43504149,43502283,43501871,43497876,43497279,43495605,43495339,43494815,43486870,43486696,43486322,43479593,43478132,43475544 Gene ID= ENSG00000176531.10 TPM= 5.43 Transcript Type= NA chr19 43501086 43504813 43501086 43504813 - transcript4690.chr19.nnic@PHLDB3 transcript4690.chr19.nnic protein_coding 43504589,43503906,43502101,43501734,43501086 43504813,43504132,43502283,43501871,43501343 Gene ID= ENSG00000176531.10 TPM= 3.62 Transcript Type= NA chr19 43506719 43527244 43506719 43527244 - ENST00000292147.6@ETHE1 ENST00000292147.6 protein_coding 43527097,43526515,43526201,43511437,43508775,43507944,43506719 43527244,43526659,43526349,43511566,43508864,43508060,43506902 Gene ID= ENSG00000105755.7 TPM= 44.37 Transcript Type= protein_coding chr19 43543040 43576006 43543040 43576006 - ENST00000262887.9@XRCC1 ENST00000262887.9 protein_coding 43575408,43574910,43560910,43554646,43553609,43553401,43552982,43552797,43552017,43551571,43546884,43546595,43546052,43545818,43544144,43543612,43543040 43576006,43575002,43561020,43554804,43553683,43553512,43553091,43552908,43552275,43551687,43546977,43546727,43546106,43545957,43544234,43543687,43543505 Gene ID= ENSG00000073050.11 TPM= 38.49 Transcript Type= protein_coding chr19 43543308 43575562 43543308 43575562 - transcript4700.chr19.nic@XRCC1 transcript4700.chr19.nic protein_coding 43575408,43574910,43554646,43553609,43553401,43552982,43552797,43552017,43551571,43546884,43546595,43546052,43545818,43544144,43543612,43543308 43575562,43575002,43554804,43553683,43553512,43553091,43552908,43552275,43551687,43546977,43546727,43546106,43545957,43544234,43543687,43543505 Gene ID= ENSG00000073050.11 TPM= 4.07 Transcript Type= NA chr19 43585936 43589687 43585936 43589687 - ENST00000596409.1@IRGQ ENST00000596409.1 protein_coding 43585936 43589687 Gene ID= ENSG00000167378.8 TPM= 4.53 Transcript Type= retained_intron chr19 43596605 43601157 43596605 43601157 + ENST00000336564.4@ZNF576 ENST00000336564.4 protein_coding 43596605,43597094,43598831 43596743,43597193,43601157 Gene ID= ENSG00000124444.15 TPM= 21.73 Transcript Type= protein_coding chr19 43607223 43619632 43607223 43619632 - transcript4712.chr19.nnic@ZNF428 transcript4712.chr19.nnic protein_coding 43619558,43618833,43614229,43607223 43619632,43618998,43614434,43608107 Gene ID= ENSG00000131116.11 TPM= 5.43 Transcript Type= NA chr19 43607219 43619874 43607219 43619874 - ENST00000300811.7@ZNF428 ENST00000300811.7 protein_coding 43619558,43614229,43607219 43619874,43614434,43608107 Gene ID= ENSG00000131116.11 TPM= 56.14 Transcript Type= protein_coding chr19 43624833 43639868 43624833 43639868 - transcript4710.chr19.nic@CADM4 transcript4710.chr19.nic protein_coding 43639727,43627644,43627166,43626784,43626124,43625911,43625078,43624833 43639868,43627790,43627318,43626918,43626288,43626001,43625250,43624903 Gene ID= ENSG00000105767.2 TPM= 19.02 Transcript Type= NA chr19 43619527 43632168 43619527 43632168 - transcript4718.chr19.nnic@CADM4 transcript4718.chr19.nnic protein_coding 43631508,43628784,43619527 43632168,43628987,43619632 Gene ID= ENSG00000105767.2 TPM= 1.81 Transcript Type= NA chr19 43622368 43639839 43622368 43639839 - ENST00000222374.2@CADM4 ENST00000222374.2 protein_coding 43639727,43627644,43627166,43626784,43626124,43625911,43625078,43624114,43622368 43639839,43627790,43627318,43626918,43626288,43626001,43625250,43624242,43623439 Gene ID= ENSG00000105767.2 TPM= 9.06 Transcript Type= protein_coding chr19 43648580 43670350 43648580 43670350 - ENST00000340093.7@PLAUR ENST00000340093.7 protein_coding 43670066,43667581,43665316,43656479,43655439,43652225,43648580 43670350,43667691,43665459,43656640,43655573,43652371,43649143 Gene ID= ENSG00000011422.11 TPM= 9.96 Transcript Type= protein_coding chr19 43648580 43670547 43648580 43670547 - ENST00000221264.8@PLAUR ENST00000221264.8 protein_coding 43670066,43667581,43665316,43656479,43652225,43648580 43670547,43667691,43665459,43656640,43652371,43649143 Gene ID= ENSG00000011422.11 TPM= 1.81 Transcript Type= protein_coding chr19 43727987 43754961 43727987 43754961 - transcript4723.chr19.nnic@SMG9 transcript4723.chr19.nnic protein_coding 43754654,43750592,43747978,43747633,43747442,43744772,43740107,43738122,43737597,43734389,43733626,43733324,43732858,43727987 43754961,43750747,43748052,43747897,43747539,43744884,43740218,43738217,43737682,43734495,43733733,43733452,43733002,43729049 Gene ID= ENSG00000105771.13 TPM= 1.81 Transcript Type= NA chr19 43727992 43754990 43727992 43754990 - ENST00000270066.10@SMG9 ENST00000270066.10 protein_coding 43754654,43750592,43747978,43747633,43747442,43744772,43740107,43738122,43737597,43734389,43733626,43733324,43732858,43727992 43754990,43750747,43748052,43747897,43747539,43744884,43740218,43738217,43737682,43734495,43733733,43733452,43733002,43731674 Gene ID= ENSG00000105771.13 TPM= 25.36 Transcript Type= protein_coding chr19 43827415 43848834 43827415 43848834 + transcript4728.chr19.nic@ZNF283 transcript4728.chr19.nic protein_coding 43827415,43827776,43828202,43831318,43835505,43837053,43846939 43827444,43827940,43828281,43831381,43835592,43837179,43848834 Gene ID= ENSG00000167637.16 TPM= 1.81 Transcript Type= NA chr19 43827374 43852012 43827374 43852012 + transcript4729.chr19.nic@ZNF283 transcript4729.chr19.nic protein_coding 43827374,43828202,43831318,43835505,43837053,43846939 43827444,43828281,43831381,43835592,43837179,43852012 Gene ID= ENSG00000167637.16 TPM= 1.81 Transcript Type= NA chr19 43872365 43901823 43872365 43901823 - transcript4735.chr19.nic@ZNF404 transcript4735.chr19.nic protein_coding 43901037,43900868,43883956,43880010,43872365 43901823,43900954,43884051,43880136,43874077 Gene ID= ENSG00000176222.8 TPM= 1.81 Transcript Type= NA chr19 43912150 43935306 43912150 43935306 - transcript4740.chr19.nnic@ZNF45 transcript4740.chr19.nnic protein_coding 43934924,43934426,43932604,43931247,43929918,43925325,43924402,43924238,43922171,43919573,43918870,43912150 43935306,43934694,43932690,43931365,43930000,43925458,43924561,43924310,43922217,43919699,43918962,43915200 Gene ID= ENSG00000124459.11 TPM= 4.83 Transcript Type= NA chr19 43912573 43935304 43912573 43935304 - transcript4746.chr19.nic@ZNF45 transcript4746.chr19.nic protein_coding 43935230,43934426,43932604,43925325,43924402,43924238,43922171,43919573,43918870,43912573 43935304,43934694,43932690,43925458,43924561,43924310,43922217,43919699,43918962,43915200 Gene ID= ENSG00000124459.11 TPM= 2.11 Transcript Type= NA chr19 43912573 43935250 43912573 43935250 - transcript4748.chr19.nnic@ZNF45 transcript4748.chr19.nnic protein_coding 43934924,43934426,43925325,43924402,43924238,43922171,43919573,43918870,43912573 43935250,43934694,43925458,43924561,43924310,43922217,43919762,43918962,43915200 Gene ID= ENSG00000124459.11 TPM= 2.11 Transcript Type= NA chr19 43912629 43935259 43912629 43935259 - ENST00000269973.9@ZNF45 ENST00000269973.9 protein_coding 43934924,43934426,43932604,43925325,43924402,43924238,43922171,43919573,43918870,43912629 43935259,43934694,43932690,43925458,43924561,43924310,43922217,43919699,43918962,43915200 Gene ID= ENSG00000124459.11 TPM= 1.81 Transcript Type= protein_coding chr19 43984172 43998325 43984172 43998325 + transcript4750.chr19.nnic@ZNF155 transcript4750.chr19.nnic protein_coding 43984172,43988459,43991548,43991842,43996093,43998055 43984245,43988558,43991674,43991934,43997999,43998325 Gene ID= ENSG00000204920.10 TPM= 5.89 Transcript Type= NA chr19 43987978 43998325 43987978 43998325 + transcript4753.chr19.nnic@ZNF155 transcript4753.chr19.nnic protein_coding 43987978,43991548,43991842,43996093,43998055 43988558,43991674,43991934,43997999,43998325 Gene ID= ENSG00000204920.10 TPM= 2.26 Transcript Type= NA chr19 43995772 44002821 43995772 44002821 - transcript4756.chr19.nnic@AC006213.1 transcript4756.chr19.nnic antisense_RNA 44002624,43998065,43995772 44002821,43999232,43998011 Gene ID= ENSG00000266921.1 TPM= 3.62 Transcript Type= NA chr19 44002948 44013926 44002948 44013926 + ENST00000429154.6@ZNF230 ENST00000429154.6 protein_coding 44002948,44007011,44008790,44009084,44010269 44003107,44007093,44008916,44009170,44013926 Gene ID= ENSG00000159882.12 TPM= 6.34 Transcript Type= protein_coding chr19 44025400 44033112 44025400 44033112 + ENST00000391960.3@ZNF222 ENST00000391960.3 protein_coding 44025400,44027023,44027398,44031817 44025478,44027149,44027490,44033112 Gene ID= ENSG00000159885.13 TPM= 5.43 Transcript Type= protein_coding chr19 44094345 44109830 44094345 44109830 + transcript4763.chr19.nic@ZNF224 transcript4763.chr19.nic protein_coding 44094345,44096343,44097806,44100801,44101133,44106396 44094530,44096431,44097888,44100927,44101225,44109830 Gene ID= ENSG00000267680.5 TPM= 12.22 Transcript Type= NA chr19 44094358 44109830 44094358 44109830 + transcript4764.chr19.nic@ZNF224 transcript4764.chr19.nic protein_coding 44094358,44097806,44100801,44101133,44106396 44096431,44097888,44100927,44101225,44109830 Gene ID= ENSG00000267680.5 TPM= 1.81 Transcript Type= NA chr19 44105463 44113145 44105463 44113145 - ENST00000592946.1@AC021092.1 ENST00000592946.1 antisense_RNA 44112822,44105463 44113145,44108337 Gene ID= ENSG00000186019.10 TPM= 2.26 Transcript Type= antisense_RNA chr19 44113393 44134821 44113393 44134821 + transcript4768.chr19.nic@ZNF225 transcript4768.chr19.nic protein_coding 44113393,44114049,44115760,44118188,44118482,44130850 44113569,44114213,44115842,44118314,44118574,44134821 Gene ID= ENSG00000256294.7 TPM= 1.81 Transcript Type= NA chr19 44113358 44134816 44113358 44134816 + ENST00000262894.10@ZNF225 ENST00000262894.10 protein_coding 44113358,44115760,44118188,44118482,44130850 44113569,44115842,44118314,44118574,44134816 Gene ID= ENSG00000256294.7 TPM= 5.43 Transcript Type= protein_coding chr19 44141606 44160309 44141606 44160309 + ENST00000426739.6@ZNF234 ENST00000426739.6 protein_coding 44141606,44142314,44144557,44148771,44150413,44156252 44141733,44142367,44144647,44148897,44150505,44160309 Gene ID= ENSG00000263002.7 TPM= 2.72 Transcript Type= protein_coding chr19 44212538 44237268 44212538 44237268 + ENST00000313040.11@ZNF227 ENST00000313040.11 protein_coding 44212538,44213090,44217791,44228446,44229733,44234702 44212585,44213244,44217852,44228572,44229816,44237268 Gene ID= ENSG00000131115.15 TPM= 2.64 Transcript Type= protein_coding chr19 44212528 44237267 44212528 44237267 + ENST00000621083.4@ZNF227 ENST00000621083.4 protein_coding 44212528,44213087,44217791,44228446,44229733,44234702 44212585,44213244,44217852,44228572,44229816,44237267 Gene ID= ENSG00000131115.15 TPM= 4.46 Transcript Type= protein_coding chr19 44212574 44237269 44212574 44237269 + transcript4793.chr19.nic@ZNF227 transcript4793.chr19.nic protein_coding 44212574,44213090,44217791,44228446,44229733,44234702 44212763,44213244,44217852,44228572,44229816,44237269 Gene ID= ENSG00000131115.15 TPM= 2.64 Transcript Type= NA chr19 44212528 44237267 44212528 44237267 + ENST00000391961.6@ZNF227 ENST00000391961.6 protein_coding 44212528,44213087,44228446,44229733,44234702 44212585,44213244,44228572,44229816,44237267 Gene ID= ENSG00000131115.15 TPM= 2.94 Transcript Type= protein_coding chr19 44326555 44356674 44326555 44356674 - ENST00000354340.8@ZNF112 ENST00000354340.8 protein_coding 44356626,44340416,44336623,44326555 44356674,44340542,44336718,44329936 Gene ID= ENSG00000062370.16 TPM= 1.81 Transcript Type= protein_coding chr19 44426255 44448446 44426255 44448446 - ENST00000620012.4@ZNF229 ENST00000620012.4 protein_coding 44448309,44447513,44442814,44442563,44431767,44426255 44448446,44447600,44443024,44442621,44432366,44430542 Gene ID= ENSG00000278318.4 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr19 44475644 44500547 44475644 44500547 - transcript4814.chr19.nnic@ZNF180 transcript4814.chr19.nnic protein_coding 44500275,44497284,44496548,44484361,44479283,44475644 44500547,44497377,44496665,44484435,44479409,44478146 Gene ID= ENSG00000167384.10 TPM= 2.26 Transcript Type= NA chr19 44475639 44500524 44475639 44500524 - ENST00000590088.5@ZNF180 ENST00000590088.5 protein_coding 44500198,44497284,44484361,44479283,44475639 44500524,44497377,44484435,44479409,44478146 Gene ID= ENSG00000167384.10 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr19 44643798 44663583 44643798 44663583 + ENST00000425690.7@PVR ENST00000425690.7 protein_coding 44643798,44647223,44649809,44653900,44657762,44658742,44661292,44661740 44644175,44647570,44650105,44654017,44657910,44658900,44661323,44663583 Gene ID= ENSG00000073008.14 TPM= 82.11 Transcript Type= protein_coding chr19 44643833 44666158 44643833 44666158 + transcript4831.chr19.nic@PVR transcript4831.chr19.nic protein_coding 44643833,44647223,44649809,44653900,44661292,44661740 44644175,44647570,44650105,44654017,44661323,44666158 Gene ID= ENSG00000073008.14 TPM= 6.79 Transcript Type= NA chr19 44643798 44663583 44643798 44663583 + ENST00000344956.8@PVR ENST00000344956.8 protein_coding 44643798,44647223,44649809,44653900,44657762,44661292,44661740 44644175,44647570,44650105,44654017,44657910,44661323,44663583 Gene ID= ENSG00000073008.14 TPM= 27.77 Transcript Type= protein_coding chr19 44643910 44663583 44643910 44663583 + ENST00000403059.8@PVR ENST00000403059.8 protein_coding 44643910,44647223,44649809,44653900,44657762,44658742,44661292,44661740 44644175,44647570,44650105,44654017,44657910,44658765,44661323,44663583 Gene ID= ENSG00000073008.14 TPM= 12.38 Transcript Type= protein_coding chr19 44715564 44718685 44715564 44718685 - ENST00000591312.1@AC243964.2 ENST00000591312.1 antisense_RNA 44718454,44715564 44718685,44716083 Gene ID= ENSG00000266903.1 TPM= 1.81 Transcript Type= antisense_RNA chr19 44747731 44760043 44747731 44760043 + transcript4835.chr19.nic@BCL3 transcript4835.chr19.nic protein_coding 44747731,44748695,44751227,44756232,44757017,44757327,44757646,44758246,44758724,44759428 44748128,44749046,44751380,44756340,44757221,44757415,44757723,44758413,44758841,44760043 Gene ID= ENSG00000069399.14 TPM= 1.81 Transcript Type= NA chr19 44748547 44760044 44748547 44760044 + ENST00000164227.9@BCL3 ENST00000164227.9 protein_coding 44748547,44751227,44756232,44757017,44757327,44757646,44758246,44758724,44759428 44749046,44751380,44756340,44757221,44757415,44757723,44758413,44758841,44760044 Gene ID= ENSG00000069399.14 TPM= 54.33 Transcript Type= protein_coding chr19 44809103 44821414 44809103 44821414 + ENST00000270233.10@BCAM ENST00000270233.10 protein_coding 44809103,44811225,44812163,44812478,44813250,44813438,44814152,44814604,44818522,44818741,44819056,44819346,44819582,44820705,44820916 44809206,44811346,44812391,44812548,44813346,44813620,44814288,44814760,44818637,44818882,44819192,44819490,44819726,44820822,44821414 Gene ID= ENSG00000187244.10 TPM= 32.6 Transcript Type= protein_coding chr19 44846297 44878935 44846297 44878935 + transcript4849.chr19.nic@NECTIN2 transcript4849.chr19.nic protein_coding 44846297,44865271,44871853,44873916,44874330,44878553 44846613,44865660,44872149,44874033,44874478,44878935 Gene ID= ENSG00000130202.9 TPM= 27.62 Transcript Type= NA chr19 44846175 44878941 44846175 44878941 + ENST00000252485.8@NECTIN2 ENST00000252485.8 protein_coding 44846175,44865271,44871853,44873916,44874330,44878223 44846613,44865660,44872149,44874033,44874478,44878941 Gene ID= ENSG00000130202.9 TPM= 326.45 Transcript Type= protein_coding chr19 44846526 44889228 44846526 44889228 + ENST00000252483.9@NECTIN2 ENST00000252483.9 protein_coding 44846526,44865271,44871853,44873916,44874330,44882211,44885937,44886133,44888110 44846613,44865660,44872149,44874033,44874478,44882364,44886000,44886219,44889228 Gene ID= ENSG00000130202.9 TPM= 6.34 Transcript Type= protein_coding chr19 44891215 44903643 44891215 44903643 + transcript4853.chr19.nnic@TOMM40 transcript4853.chr19.nnic protein_coding 44891215,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44901388,44903030 44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44901452,44903643 Gene ID= ENSG00000130204.12 TPM= 7.47 Transcript Type= NA chr19 44891220 44903688 44891220 44903688 + ENST00000405636.6@TOMM40 ENST00000405636.6 protein_coding 44891220,44891407,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030 44891314,44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903688 Gene ID= ENSG00000130204.12 TPM= 146.02 Transcript Type= protein_coding chr19 44891236 44903628 44891236 44903628 + ENST00000426677.6@TOMM40 ENST00000426677.6 protein_coding 44891236,44892393,44892837,44893780,44893961,44900730,44901028,44901208,44903030 44891689,44892460,44892929,44893881,44894066,44900852,44901104,44901310,44903628 Gene ID= ENSG00000130204.12 TPM= 30.79 Transcript Type= protein_coding chr19 44905754 44909393 44905754 44909393 + ENST00000252486.8@APOE ENST00000252486.8 protein_coding 44905754,44906602,44907760,44908533 44905841,44906667,44907952,44909393 Gene ID= ENSG00000130203.9 TPM= 5890.57 Transcript Type= protein_coding chr19 44914325 44919346 44914325 44919346 + ENST00000588802.5@APOC1 ENST00000588802.5 protein_coding 44914325,44914872,44916190,44919173 44914489,44914949,44916325,44919346 Gene ID= ENSG00000130208.9 TPM= 44.37 Transcript Type= protein_coding chr19 44914710 44919343 44914710 44919343 + ENST00000589781.1@APOC1 ENST00000589781.1 protein_coding 44914710,44914872,44919173 44914733,44914949,44919343 Gene ID= ENSG00000130208.9 TPM= 43.47 Transcript Type= protein_coding chr19 44942238 44949565 44942238 44949565 + ENST00000585685.5@APOC4-APOC2 ENST00000585685.5 protein_coding 44942238,44944749,44945140,44948466,44948701,44949159 44942353,44944890,44946075,44948533,44948860,44949565 Gene ID= ENSG00000224916.9 TPM= 7.7 Transcript Type= nonsense_mediated_decay chr19 44945982 44949563 44945982 44949563 + ENST00000252490.5@APOC2 ENST00000252490.5 protein_coding 44945982,44948466,44948701,44949159 44946075,44948533,44948860,44949563 Gene ID= ENSG00000234906.9 TPM= 6.79 Transcript Type= protein_coding chr19 44955246 44993341 44955246 44993341 + ENST00000337392.9@CLPTM1 ENST00000337392.9 protein_coding 44955246,44961963,44973087,44974439,44977343,44985218,44986455,44987179,44988080,44990395,44990850,44991238,44992233,44992611 44955467,44962075,44973210,44974597,44977460,44985303,44986575,44987423,44988173,44990585,44990945,44991373,44992400,44993341 Gene ID= ENSG00000104853.15 TPM= 1047.11 Transcript Type= protein_coding chr19 45001430 45038194 45001430 45038194 + ENST00000221452.12@RELB ENST00000221452.12 protein_coding 45001430,45002949,45009814,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405 45001685,45002996,45009822,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038194 Gene ID= ENSG00000104856.13 TPM= 36.67 Transcript Type= protein_coding chr19 45002278 45038194 45002278 45038194 + transcript4913.chr19.nnic@RELB transcript4913.chr19.nnic protein_coding 45002278,45002949,45009814,45011936,45022053,45025329,45025606,45028888,45032534,45034244,45034451,45037405 45002795,45002996,45009822,45012276,45022210,45025420,45025737,45028992,45032749,45034312,45034528,45038194 Gene ID= ENSG00000104856.13 TPM= 4.07 Transcript Type= NA chr19 45039040 45070956 45039040 45070956 + ENST00000221455.7@CLASRP ENST00000221455.7 protein_coding 45039040,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803 45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068054,45068480,45069124,45069248,45070104,45070561,45070956 Gene ID= ENSG00000104859.14 TPM= 12.68 Transcript Type= protein_coding chr19 45039043 45066613 45039043 45066613 + transcript4925.chr19.nic@CLASRP transcript4925.chr19.nic protein_coding 45039043,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012 45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45066613 Gene ID= ENSG00000104859.14 TPM= 2.72 Transcript Type= NA chr19 45039065 45070956 45039065 45070956 + ENST00000391952.7@CLASRP ENST00000391952.7 protein_coding 45039065,45040184,45052071,45052791,45053098,45056450,45057750,45059268,45060389,45060554,45062154,45064012,45064343,45067337,45068015,45068420,45069066,45069202,45070022,45070537,45070803 45039108,45040311,45052168,45052892,45053177,45056534,45057898,45059364,45060467,45060627,45062195,45064227,45064630,45067594,45068058,45068480,45069124,45069248,45070104,45070561,45070956 Gene ID= ENSG00000104859.14 TPM= 13.58 Transcript Type= nonsense_mediated_decay chr19 45071500 45076588 45071500 45076588 - ENST00000303809.6@ZNF296 ENST00000303809.6 protein_coding 45076076,45075713,45071500 45076588,45075862,45072580 Gene ID= ENSG00000170684.8 TPM= 2.72 Transcript Type= protein_coding chr19 45085328 45091612 45085328 45091612 - transcript4932.chr19.nnic@AC011489.1 transcript4932.chr19.nnic antisense_RNA 45091200,45090069,45085328 45091612,45090497,45085640 Gene ID= ENSG00000267348.2 TPM= 1.81 Transcript Type= NA chr19 45079262 45091524 45079262 45091524 + ENST00000270257.8@GEMIN7 ENST00000270257.8 protein_coding 45079262,45079907,45090107 45079377,45080029,45091524 Gene ID= ENSG00000142252.10 TPM= 7.24 Transcript Type= protein_coding chr19 45162933 45178237 45162933 45178237 - ENST00000585934.1@TRAPPC6A ENST00000585934.1 protein_coding 45178135,45165127,45164853,45164164,45163916,45162933 45178237,45165194,45164970,45164247,45164009,45163223 Gene ID= ENSG00000007255.10 TPM= 14.49 Transcript Type= protein_coding chr19 45162928 45178237 45162928 45178237 - ENST00000006275.8@TRAPPC6A ENST00000006275.8 protein_coding 45178093,45165127,45164853,45164164,45163916,45162928 45178237,45165194,45164970,45164247,45164009,45163223 Gene ID= ENSG00000007255.10 TPM= 12.68 Transcript Type= protein_coding chr19 45162928 45178237 45162928 45178237 - ENST00000588062.5@TRAPPC6A ENST00000588062.5 protein_coding 45178135,45164853,45164164,45163916,45162928 45178237,45164970,45164247,45164009,45163223 Gene ID= ENSG00000007255.10 TPM= 2.72 Transcript Type= protein_coding chr19 45178745 45181801 45178745 45181801 + ENST00000433642.2@BLOC1S3 ENST00000433642.2 protein_coding 45178745,45179288 45178831,45181801 Gene ID= ENSG00000189114.6 TPM= 30.79 Transcript Type= protein_coding chr19 45212621 45245431 45212621 45245431 - ENST00000413988.2@EXOC3L2 ENST00000413988.2 protein_coding 45245341,45238523,45234193,45231763,45228165,45227974,45227662,45224778,45218197,45217528,45216073,45212621 45245431,45239061,45234826,45231874,45228266,45228074,45227772,45224913,45218319,45217683,45216194,45213357 Gene ID= ENSG00000283632.2 TPM= 24.45 Transcript Type= protein_coding chr19 45251258 45303693 45251258 45303693 + ENST00000262891.8@MARK4 ENST00000262891.8 protein_coding 45251258,45258989,45263113,45263319,45264684,45264840,45266225,45271472,45277923,45278516,45280374,45280575,45287447,45294349,45297676,45299811,45302374 45251639,45259189,45263166,45263367,45264749,45264910,45266281,45271708,45278042,45278615,45280483,45280734,45287664,45294452,45297954,45299855,45303693 Gene ID= ENSG00000007047.14 TPM= 14.49 Transcript Type= protein_coding chr19 45349837 45370618 45349837 45370618 - ENST00000391945.8@ERCC2 ENST00000391945.8 protein_coding 45370536,45370133,45369070,45368930,45368630,45365042,45364838,45364424,45364235,45363986,45363743,45361524,45357630,45357474,45357270,45355665,45354730,45353242,45353083,45352746,45352506,45352209,45349837 45370618,45370232,45369147,45368992,45368743,45365158,45364954,45364547,45364331,45364119,45363911,45361642,45357699,45357543,45357371,45355728,45354851,45353334,45353155,45352816,45352649,45352352,45351721 Gene ID= ENSG00000104884.14 TPM= 55.24 Transcript Type= protein_coding chr19 45379638 45406349 45379638 45406349 - ENST00000418234.6@PPP1R13L ENST00000418234.6 protein_coding 45406292,45398264,45398005,45396545,45396338,45396168,45395436,45391880,45386049,45385824,45385562,45382527,45379638 45406349,45398339,45398147,45397058,45396436,45396259,45395886,45392340,45386180,45385957,45385728,45382726,45380228 Gene ID= ENSG00000104881.15 TPM= 3.17 Transcript Type= protein_coding chr19 45379638 45393167 45379638 45393167 - ENST00000587270.5@PPP1R13L ENST00000587270.5 protein_coding 45391880,45386049,45385824,45385562,45382527,45379638 45393167,45386180,45385957,45385728,45382726,45380228 Gene ID= ENSG00000104881.15 TPM= 4.53 Transcript Type= retained_intron chr19 45379634 45405038 45379634 45405038 - ENST00000360957.9@PPP1R13L ENST00000360957.9 protein_coding 45404999,45398264,45398005,45396545,45396338,45396168,45395436,45391880,45386049,45385824,45385562,45382527,45379634 45405038,45398339,45398147,45397058,45396436,45396259,45395886,45392340,45386180,45385957,45385728,45382726,45380228 Gene ID= ENSG00000104881.15 TPM= 4.07 Transcript Type= protein_coding chr19 45406209 45410766 45406209 45410766 + ENST00000309424.7@CD3EAP ENST00000309424.7 protein_coding 45406209,45407094,45408133 45406718,45407235,45410766 Gene ID= ENSG00000117877.10 TPM= 12.68 Transcript Type= protein_coding chr19 45407333 45424365 45407333 45424365 - ENST00000300853.7@ERCC1 ENST00000300853.7 protein_coding 45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45407333 45424365,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725 Gene ID= ENSG00000012061.15 TPM= 18.86 Transcript Type= protein_coding chr19 45407333 45423551 45407333 45423551 - transcript4958.chr19.nic@ERCC1 transcript4958.chr19.nic protein_coding 45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413677,45407333 45423551,45421393,45420427,45419197,45416897,45414960,45414034,45413745,45409725 Gene ID= ENSG00000012061.15 TPM= 15.24 Transcript Type= NA chr19 45407333 45423924 45407333 45423924 - transcript4960.chr19.nic@ERCC1 transcript4960.chr19.nic protein_coding 45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413677,45407333 45423924,45423381,45421393,45420427,45419197,45416897,45414960,45413745,45409725 Gene ID= ENSG00000012061.15 TPM= 4.83 Transcript Type= NA chr19 45413436 45423923 45413436 45423923 - transcript4962.chr19.nic@ERCC1 transcript4962.chr19.nic protein_coding 45423781,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413436 45423923,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745 Gene ID= ENSG00000012061.15 TPM= 8.15 Transcript Type= NA chr19 45413436 45423924 45413436 45423924 - transcript4963.chr19.nic@ERCC1 transcript4963.chr19.nic protein_coding 45423823,45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413436 45423924,45423381,45421393,45420427,45419197,45416897,45414960,45414034,45413745 Gene ID= ENSG00000012061.15 TPM= 5.43 Transcript Type= NA chr19 45413434 45423566 45413434 45423566 - ENST00000013807.9@ERCC1 ENST00000013807.9 protein_coding 45423270,45421178,45420324,45419098,45416821,45414861,45413963,45413434 45423566,45421393,45420427,45419197,45416897,45414960,45414034,45413745 Gene ID= ENSG00000012061.15 TPM= 2.72 Transcript Type= protein_coding chr19 45485289 45497061 45485289 45497061 - ENST00000245923.8@RTN2 ENST00000245923.8 protein_coding 45496792,45495095,45494526,45494166,45493160,45489346,45488848,45488637,45488471,45486055,45485289 45497061,45495139,45495005,45494420,45493378,45489553,45488986,45488706,45488517,45486113,45485789 Gene ID= ENSG00000125744.11 TPM= 2.42 Transcript Type= protein_coding chr19 45485294 45497055 45485294 45497055 - ENST00000344680.8@RTN2 ENST00000344680.8 protein_coding 45496792,45495095,45494526,45494166,45489346,45488848,45488637,45488471,45486055,45485294 45497055,45495139,45495005,45494420,45489553,45488986,45488706,45488517,45486113,45485789 Gene ID= ENSG00000125744.11 TPM= 3.32 Transcript Type= protein_coding chr19 45485294 45493267 45485294 45493267 - ENST00000430715.6@RTN2 ENST00000430715.6 protein_coding 45493160,45489346,45488848,45488637,45488471,45486055,45485294 45493267,45489553,45488986,45488706,45488517,45486113,45485789 Gene ID= ENSG00000125744.11 TPM= 12.38 Transcript Type= protein_coding chr19 45507416 45526983 45507416 45526983 + ENST00000245932.10@VASP ENST00000245932.10 protein_coding 45507416,45517663,45517929,45521322,45522168,45522340,45522718,45523644,45523841,45524097,45524570,45525946,45526140 45507776,45517834,45518094,45521406,45522217,45522581,45522818,45523695,45523877,45524142,45524660,45526003,45526983 Gene ID= ENSG00000125753.13 TPM= 67.92 Transcript Type= protein_coding chr19 45527427 45584842 45527427 45584842 - ENST00000323060.3@OPA3 ENST00000323060.3 protein_coding 45584623,45527427 45584842,45529456 Gene ID= ENSG00000125741.4 TPM= 8.15 Transcript Type= protein_coding chr19 45546281 45584819 45546281 45584819 - ENST00000263275.4@OPA3 ENST00000263275.4 protein_coding 45584623,45546281 45584819,45553911 Gene ID= ENSG00000125741.4 TPM= 5.43 Transcript Type= protein_coding chr19 45589764 45602208 45589764 45602208 - ENST00000323040.4@GPR4 ENST00000323040.4 protein_coding 45602095,45589764 45602208,45592697 Gene ID= ENSG00000177464.4 TPM= 8.15 Transcript Type= protein_coding chr19 45609386 45639369 45609386 45639369 - transcript4996.chr19.nic@EML2 transcript4996.chr19.nic protein_coding 45639295,45638845,45638505,45634322,45633070,45632861,45629951,45626705,45624719,45621483,45621207,45619060,45617630,45616765,45616461,45615802,45614605,45613541,45609386 45639369,45638873,45638634,45634471,45633139,45632971,45630046,45626839,45624818,45621637,45621332,45619191,45617697,45616853,45616558,45615889,45614700,45613671,45609788 Gene ID= ENSG00000125746.16 TPM= 7.62 Transcript Type= NA chr19 45609400 45639427 45609400 45639427 - ENST00000245925.7@EML2 ENST00000245925.7 protein_coding 45639357,45638845,45638505,45634322,45633070,45632861,45629951,45626705,45624719,45621483,45621207,45619060,45617630,45616765,45616461,45615802,45614605,45613541,45609400 45639427,45638873,45638634,45634471,45633139,45632971,45630046,45626839,45624818,45621637,45621332,45619191,45617697,45616853,45616558,45615889,45614700,45613671,45609788 Gene ID= ENSG00000125746.16 TPM= 59.69 Transcript Type= protein_coding chr19 45609400 45639395 45609400 45639395 - ENST00000586195.5@EML2 ENST00000586195.5 protein_coding 45639357,45638845,45633070,45632861,45629951,45626705,45624719,45621483,45621207,45619060,45617630,45616765,45616461,45615802,45614605,45613541,45609400 45639395,45638873,45633139,45632971,45630046,45626839,45624818,45621637,45621332,45619191,45617697,45616853,45616558,45615889,45614700,45613671,45609788 Gene ID= ENSG00000125746.16 TPM= 2.64 Transcript Type= nonsense_mediated_decay chr19 45687454 45692333 45687454 45692333 - ENST00000342669.7@SNRPD2 ENST00000342669.7 protein_coding 45691887,45688387,45687454 45692333,45688566,45687727 Gene ID= ENSG00000125743.10 TPM= 122.25 Transcript Type= protein_coding chr19 45710631 45730890 45710631 45730890 - transcript5016.chr19.nnic@FBXO46 transcript5016.chr19.nnic protein_coding 45730849,45723473,45710631 45730890,45723885,45713573 Gene ID= ENSG00000177051.5 TPM= 1.81 Transcript Type= NA chr19 45710629 45730904 45710629 45730904 - ENST00000317683.3@FBXO46 ENST00000317683.3 protein_coding 45730849,45710629 45730904,45713573 Gene ID= ENSG00000177051.5 TPM= 18.11 Transcript Type= protein_coding chr19 45764785 45769226 45764785 45769226 - ENST00000317578.6@SIX5 ENST00000317578.6 protein_coding 45768042,45766350,45764785 45769226,45767155,45766111 Gene ID= ENSG00000177045.7 TPM= 42.56 Transcript Type= protein_coding chr19 45769717 45782478 45769717 45782478 - ENST00000291270.8@DMPK ENST00000291270.8 protein_coding 45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769717 45782478,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640 Gene ID= ENSG00000104936.17 TPM= 177.33 Transcript Type= protein_coding chr19 45769720 45779619 45769720 45779619 - ENST00000596686.5@DMPK ENST00000596686.5 protein_coding 45779439,45779264,45778493,45778127,45777667,45777327,45774949,45772641,45771771,45771568,45771350,45770971,45769720 45779619,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771056,45770640 Gene ID= ENSG00000104936.17 TPM= 9.81 Transcript Type= retained_intron chr19 45769736 45782479 45769736 45782479 - ENST00000447742.6@DMPK ENST00000447742.6 protein_coding 45782193,45779778,45779439,45779264,45778493,45778127,45777667,45777342,45774949,45772641,45771771,45771568,45771350,45770971,45769736 45782479,45779869,45779522,45779359,45778641,45778220,45777873,45777590,45775034,45772752,45771928,45771665,45771396,45771060,45770640 Gene ID= ENSG00000104936.17 TPM= 3.02 Transcript Type= protein_coding chr19 45782947 45792802 45782947 45792802 - ENST00000377735.7@DMWD ENST00000377735.7 protein_coding 45792316,45790905,45785594,45782947 45792802,45791087,45786871,45784290 Gene ID= ENSG00000185800.11 TPM= 35.32 Transcript Type= protein_coding chr19 45783009 45792802 45783009 45792802 - ENST00000270223.6@DMWD ENST00000270223.6 protein_coding 45792316,45790905,45785594,45784641,45783009 45792802,45791087,45786871,45784715,45784290 Gene ID= ENSG00000185800.11 TPM= 47.99 Transcript Type= protein_coding chr19 45815435 45863290 45815435 45863290 - ENST00000245934.11@SYMPK ENST00000245934.11 protein_coding 45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831384,45830054,45828970,45827837,45827510,45826226,45825171,45823767,45823372,45822756,45821384,45817959,45816798,45816482,45815851,45815435 45863290,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588,45830204,45829205,45827918,45827623,45826373,45825331,45823875,45823472,45822846,45821485,45818146,45816974,45816577,45816183,45815697 Gene ID= ENSG00000125755.18 TPM= 56.14 Transcript Type= protein_coding chr19 45815439 45863155 45815439 45863155 - transcript5036.chr19.nic@SYMPK transcript5036.chr19.nic protein_coding 45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831384,45830054,45828970,45827837,45827510,45826226,45825171,45823767,45823372,45822756,45821384,45817959,45816798,45816482,45815851,45815439 45863155,45854585,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588,45830204,45829205,45827918,45827623,45826373,45825331,45823875,45823472,45822846,45821485,45818146,45816974,45816577,45816183,45815697 Gene ID= ENSG00000125755.18 TPM= 16.3 Transcript Type= NA chr19 45818913 45863130 45818913 45863130 - ENST00000599460.5@SYMPK ENST00000599460.5 protein_coding 45863058,45854391,45854175,45852482,45852312,45848750,45847752,45844030,45842250,45838461,45835078,45831384,45830054,45828970,45827837,45827510,45826226,45825171,45823767,45823372,45822756,45818913 45863130,45854507,45854240,45852535,45852385,45848876,45848001,45844200,45842489,45838615,45835228,45831588,45830204,45829205,45827918,45827623,45826373,45825331,45823875,45823472,45822846,45821485 Gene ID= ENSG00000125755.18 TPM= 4.53 Transcript Type= protein_coding chr19 45995467 46018616 45995467 46018616 + ENST00000595358.5@CCDC61 ENST00000595358.5 protein_coding 45995467,46003008,46003419,46006559,46008140,46015049,46015345,46016054,46016318,46016694,46016991,46017247,46018078,46018290 45995504,46003166,46003501,46006716,46008301,46015259,46015427,46016223,46016393,46016833,46017069,46017304,46018150,46018616 Gene ID= ENSG00000104983.8 TPM= 41.66 Transcript Type= protein_coding chr19 46298387 46338538 46298387 46338538 + transcript5051.chr19.nic@HIF3A transcript5051.chr19.nic protein_coding 46298387,46303898,46305245,46308221,46308663,46309151,46312161,46312506,46320443,46321776,46325535,46329207,46331156,46334905,46338227 46298514,46304088,46305390,46308305,46308775,46309359,46312267,46312653,46320561,46321966,46325639,46329478,46331273,46334986,46338538 Gene ID= ENSG00000124440.15 TPM= 2.72 Transcript Type= NA chr19 46346994 46390852 46346994 46390852 + ENST00000012443.8@PPP5C ENST00000012443.8 protein_coding 46346994,46353748,46375604,46376453,46383411,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46390284 46347217,46353989,46375751,46376574,46383476,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46390852 Gene ID= ENSG00000011485.14 TPM= 103.98 Transcript Type= protein_coding chr19 46347101 46392981 46347101 46392981 + ENST00000478046.5@PPP5C ENST00000478046.5 protein_coding 46347101,46353748,46375604,46376453,46383411,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46391151,46392637 46347217,46353989,46375751,46376574,46383476,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46391258,46392981 Gene ID= ENSG00000011485.14 TPM= 2.11 Transcript Type= nonsense_mediated_decay chr19 46347108 46390852 46347108 46390852 + ENST00000391919.1@PPP5C ENST00000391919.1 protein_coding 46347108,46353748,46375604,46376453,46383780,46384804,46387093,46387366,46388408,46388553,46390051,46390284 46347217,46353989,46375751,46376574,46383878,46384909,46387235,46387453,46388448,46388731,46390132,46390852 Gene ID= ENSG00000011485.14 TPM= 7.09 Transcript Type= protein_coding chr19 46466498 46471563 46466498 46471563 - ENST00000313683.14@PNMA8A ENST00000313683.14 protein_coding 46471337,46469733,46466498 46471563,46471114,46468577 Gene ID= ENSG00000182013.17 TPM= 72.44 Transcript Type= protein_coding chr19 46620468 46625118 46620468 46625118 - ENST00000291294.6@PTGIR ENST00000291294.6 protein_coding 46624997,46623458,46620468 46625118,46624237,46621672 Gene ID= ENSG00000160013.8 TPM= 29.88 Transcript Type= protein_coding chr19 46647612 46661138 46647612 46661138 - ENST00000391916.6@DACT3 ENST00000391916.6 protein_coding 46660816,46652979,46652660,46647612 46661138,46653075,46652812,46649872 Gene ID= ENSG00000197380.10 TPM= 8.15 Transcript Type= protein_coding chr19 46674312 46716537 46674312 46716537 - transcript5085.chr19.nnic@PRKD2 transcript5085.chr19.nnic protein_coding 46716131,46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674312 46716537,46714292,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735 Gene ID= ENSG00000105287.12 TPM= 5.13 Transcript Type= NA chr19 46674317 46717127 46674317 46717127 - ENST00000433867.5@PRKD2 ENST00000433867.5 protein_coding 46716815,46716131,46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674317 46717127,46716535,46714001,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735 Gene ID= ENSG00000105287.12 TPM= 16 Transcript Type= protein_coding chr19 46674320 46714324 46674320 46714324 - ENST00000600194.5@PRKD2 ENST00000600194.5 protein_coding 46713863,46710907,46704495,46704169,46701035,46700799,46697733,46697157,46693875,46691933,46691735,46690600,46689537,46681650,46678396,46675033,46674320 46714324,46711038,46704649,46704391,46701112,46700952,46697850,46697234,46694133,46691985,46691807,46690706,46689698,46681748,46678663,46675118,46674735 Gene ID= ENSG00000105287.12 TPM= 2.42 Transcript Type= protein_coding chr19 46719507 46746478 46719507 46746478 - transcript5089.chr19.nic@STRN4 transcript5089.chr19.nic protein_coding 46746149,46738785,46738164,46736823,46733816,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719507 46746478,46738888,46738237,46736901,46733875,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338 Gene ID= ENSG00000090372.14 TPM= 4.23 Transcript Type= NA chr19 46719507 46746480 46719507 46746480 - ENST00000263280.10@STRN4 ENST00000263280.10 protein_coding 46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719507 46746480,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727546,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338 Gene ID= ENSG00000090372.14 TPM= 44.98 Transcript Type= protein_coding chr19 46719511 46746881 46719511 46746881 - ENST00000391910.7@STRN4 ENST00000391910.7 protein_coding 46746149,46738785,46738164,46736823,46733039,46730732,46728618,46727894,46727452,46725473,46725332,46724807,46723114,46722810,46722242,46721986,46720536,46719511 46746881,46738888,46738237,46736901,46733236,46730873,46728777,46728007,46727567,46725648,46725379,46724928,46723284,46722950,46722340,46722072,46720771,46720338 Gene ID= ENSG00000090372.14 TPM= 16 Transcript Type= protein_coding chr19 46746046 46758485 46746046 46758485 + ENST00000318584.9@FKRP ENST00000318584.9 protein_coding 46746046,46748027,46748515,46755412 46746090,46748088,46748665,46758485 Gene ID= ENSG00000181027.10 TPM= 17.21 Transcript Type= protein_coding chr19 46774883 46788594 46774883 46788594 - ENST00000542575.6@SLC1A5 ENST00000542575.6 protein_coding 46787400,46784517,46784097,46782383,46778675,46777211,46776975,46774883 46788594,46784559,46784144,46782549,46778908,46777405,46777109,46775747 Gene ID= ENSG00000105281.12 TPM= 93.27 Transcript Type= protein_coding chr19 46838167 46850992 46838167 46850992 - ENST00000263270.10@AP2S1 ENST00000263270.10 protein_coding 46850764,46845993,46839465,46838740,46838167 46850992,46846142,46839578,46838799,46838548 Gene ID= ENSG00000042753.11 TPM= 153.34 Transcript Type= protein_coding chr19 46838158 46850316 46838158 46850316 - ENST00000601498.5@AP2S1 ENST00000601498.5 protein_coding 46850134,46845993,46839465,46838740,46838158 46850316,46846142,46839578,46838799,46838548 Gene ID= ENSG00000042753.11 TPM= 8.45 Transcript Type= protein_coding chr19 46838158 46850834 46838158 46850834 - ENST00000593442.5@AP2S1 ENST00000593442.5 protein_coding 46850764,46839465,46838740,46838158 46850834,46839578,46838799,46838548 Gene ID= ENSG00000042753.11 TPM= 8.45 Transcript Type= protein_coding chr19 47019820 47045775 47019820 47045775 + ENST00000602212.5@NPAS1 ENST00000602212.5 protein_coding 47019820,47021006,47021612,47032278,47032643,47035964,47039036,47039407,47040444,47040978,47042810,47045191 47019997,47021169,47021847,47032351,47032732,47036129,47039151,47039564,47040550,47041125,47042904,47045775 Gene ID= ENSG00000130751.9 TPM= 2.72 Transcript Type= protein_coding chr19 47045910 47048658 47045910 47048658 - transcript5123.chr19.nnic@TMEM160 transcript5123.chr19.nnic protein_coding 47048407,47046593,47045910 47048658,47046685,47046126 Gene ID= ENSG00000130748.6 TPM= 1.81 Transcript Type= NA chr19 47045907 47048630 47045907 47048630 - ENST00000253047.6@TMEM160 ENST00000253047.6 protein_coding 47048407,47046593,47045907 47048630,47046685,47046252 Gene ID= ENSG00000130748.6 TPM= 71.54 Transcript Type= protein_coding chr19 47130835 47210190 47130835 47210190 + transcript5126.chr19.nnic@SAE1 transcript5126.chr19.nnic protein_coding 47130835,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47205104,47209159 47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47205129,47210190 Gene ID= ENSG00000142230.11 TPM= 3.85 Transcript Type= NA chr19 47130828 47210190 47130828 47210190 + transcript5127.chr19.nic@SAE1 transcript5127.chr19.nic protein_coding 47130828,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159 47130858,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210190 Gene ID= ENSG00000142230.11 TPM= 5.66 Transcript Type= NA chr19 47130863 47210191 47130863 47210191 + ENST00000270225.11@SAE1 ENST00000270225.11 protein_coding 47130863,47143494,47150202,47152898,47155114,47169818,47197233,47203671,47209159 47131028,47143605,47150375,47153040,47155213,47169923,47197377,47203740,47210191 Gene ID= ENSG00000142230.11 TPM= 95.31 Transcript Type= protein_coding chr19 47130895 47210170 47130895 47210170 + ENST00000392776.3@SAE1 ENST00000392776.3 protein_coding 47130895,47143494,47150202,47152898,47155114,47169818,47203671,47209159 47131028,47143605,47150375,47153040,47155213,47169923,47203740,47210170 Gene ID= ENSG00000142230.11 TPM= 1.81 Transcript Type= protein_coding chr19 47220824 47232766 47220824 47232766 - ENST00000449228.5@BBC3 ENST00000449228.5 protein_coding 47232515,47228158,47226564,47220824 47232766,47228446,47226754,47221918 Gene ID= ENSG00000105327.17 TPM= 6.95 Transcript Type= protein_coding chr19 47220821 47228528 47220821 47228528 - transcript5137.chr19.nic@BBC3 transcript5137.chr19.nic protein_coding 47228158,47226564,47220821 47228528,47226754,47221918 Gene ID= ENSG00000105327.17 TPM= 5.13 Transcript Type= NA chr19 47220821 47231238 47220821 47231238 - transcript5138.chr19.nnic@BBC3 transcript5138.chr19.nnic protein_coding 47230929,47226564,47220821 47231238,47226754,47221918 Gene ID= ENSG00000105327.17 TPM= 5.89 Transcript Type= NA chr19 47220827 47231194 47220827 47231194 - ENST00000439096.2@BBC3 ENST00000439096.2 protein_coding 47230929,47228158,47226564,47220827 47231194,47228446,47226754,47221918 Gene ID= ENSG00000105327.17 TPM= 4.68 Transcript Type= protein_coding chr19 47256459 47271953 47256459 47271953 + ENST00000221922.10@CCDC9 ENST00000221922.10 protein_coding 47256459,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274 47256609,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271953 Gene ID= ENSG00000105321.12 TPM= 21.13 Transcript Type= protein_coding chr19 47257482 47271957 47257482 47271957 + transcript5143.chr19.nic@CCDC9 transcript5143.chr19.nic protein_coding 47257482,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274 47257654,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271957 Gene ID= ENSG00000105321.12 TPM= 3.92 Transcript Type= NA chr19 47257482 47271957 47257482 47271957 + transcript5144.chr19.nic@CCDC9 transcript5144.chr19.nic protein_coding 47257482,47258330,47258559,47260321,47260588,47264603,47264773,47266611,47270407,47270553,47271082,47271274 47257909,47258403,47258663,47260422,47260839,47264686,47264946,47266792,47270453,47270688,47271187,47271957 Gene ID= ENSG00000105321.12 TPM= 6.64 Transcript Type= NA chr19 47274453 47275707 47274453 47275707 + ENST00000552360.3@INAFM1 ENST00000552360.3 protein_coding 47274453 47275707 Gene ID= ENSG00000257704.3 TPM= 292.49 Transcript Type= protein_coding chr19 47309874 47322066 47309874 47322066 + ENST00000355085.3@C5AR1 ENST00000355085.3 protein_coding 47309874,47319781 47309898,47322066 Gene ID= ENSG00000197405.7 TPM= 22.64 Transcript Type= protein_coding chr19 47349315 47382672 47349315 47382672 + transcript5151.chr19.nic@DHX34 transcript5151.chr19.nic protein_coding 47349315,47352754,47355039,47357866,47359968,47362476,47366981,47372730,47373599,47375466,47375924,47376443,47376915,47377100,47379710,47380816,47381186,47381980 47349352,47353735,47355350,47358120,47360070,47362693,47367155,47372923,47373700,47375708,47376097,47376560,47376989,47377206,47379985,47380992,47381324,47382672 Gene ID= ENSG00000134815.18 TPM= 3.62 Transcript Type= NA chr19 47349281 47382704 47349281 47382704 + ENST00000328771.8@DHX34 ENST00000328771.8 protein_coding 47349281,47352754,47355039,47357866,47359968,47362476,47366981,47372730,47373599,47375466,47375924,47376443,47377100,47379710,47380816,47381186,47381980 47349352,47353735,47355350,47358120,47360070,47362693,47367155,47372923,47373700,47375708,47376097,47376560,47377206,47379985,47380992,47381324,47382704 Gene ID= ENSG00000134815.18 TPM= 8.15 Transcript Type= protein_coding chr19 47405431 47419530 47405431 47419530 - transcript5163.chr19.nic@MEIS3 transcript5163.chr19.nic protein_coding 47419070,47417178,47416804,47416652,47415051,47414717,47409436,47409099,47407352,47407079,47406888,47405431 47419530,47417350,47416963,47416702,47415101,47414866,47409547,47409247,47407428,47407137,47406971,47406526 Gene ID= ENSG00000105419.17 TPM= 2.72 Transcript Type= NA chr19 47475144 47484268 47475144 47484268 - ENST00000338134.7@KPTN ENST00000338134.7 protein_coding 47483935,47483502,47483295,47483161,47480958,47480760,47480298,47479863,47477706,47476803,47476532,47475144 47484268,47483584,47483379,47483215,47481033,47480833,47480407,47479940,47477781,47476938,47476714,47475544 Gene ID= ENSG00000118162.13 TPM= 11.77 Transcript Type= protein_coding chr19 47475144 47484263 47475144 47484263 - transcript5166.chr19.nnic@KPTN transcript5166.chr19.nnic protein_coding 47483935,47483502,47483295,47483161,47480958,47480298,47479863,47477706,47476803,47476532,47476115,47475144 47484263,47483584,47483379,47483215,47481033,47480833,47479940,47477781,47476938,47476714,47476301,47475544 Gene ID= ENSG00000118162.13 TPM= 1.81 Transcript Type= NA chr19 47475140 47484263 47475140 47484263 - transcript5168.chr19.nic@KPTN transcript5168.chr19.nic protein_coding 47483935,47483502,47483295,47483161,47480958,47480298,47479863,47477706,47476803,47476532,47475140 47484263,47483584,47483379,47483215,47481033,47480833,47479940,47477781,47476938,47476714,47475544 Gene ID= ENSG00000118162.13 TPM= 1.81 Transcript Type= NA chr19 47484282 47496382 47484282 47496382 + ENST00000593284.5@NAPA-AS1 ENST00000593284.5 antisense_RNA 47484282,47493447,47495028 47484524,47493601,47496382 Gene ID= ENSG00000268061.5 TPM= 2.72 Transcript Type= antisense_RNA chr19 47487636 47515084 47487636 47515084 - transcript5173.chr19.nnic@NAPA transcript5173.chr19.nnic protein_coding 47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487856,47487636 47515084,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487801 Gene ID= ENSG00000105402.7 TPM= 9.21 Transcript Type= NA chr19 47487636 47515092 47487636 47515092 - transcript5175.chr19.nic@NAPA transcript5175.chr19.nic protein_coding 47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47488235,47487636 47515092,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389,47487890 Gene ID= ENSG00000105402.7 TPM= 26.41 Transcript Type= NA chr19 47487637 47515240 47487637 47515240 - ENST00000263354.7@NAPA ENST00000263354.7 protein_coding 47514843,47503423,47500633,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487637 47515240,47503502,47500749,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389 Gene ID= ENSG00000105402.7 TPM= 244.65 Transcript Type= protein_coding chr19 47487680 47515058 47487680 47515058 - ENST00000594001.5@NAPA ENST00000594001.5 protein_coding 47514843,47495550,47493416,47493119,47492961,47492015,47490788,47489711,47487680 47515058,47495596,47493493,47493174,47493045,47492119,47490856,47489761,47488389 Gene ID= ENSG00000105402.7 TPM= 1.06 Transcript Type= nonsense_mediated_decay chr19 47713387 47743133 47713387 47743133 + transcript5190.chr19.nnic@EHD2 transcript5190.chr19.nnic protein_coding 47713387,47716558,47718509,47725812,47736369,47740881,47742966 47713538,47717016,47718606,47726224,47736533,47741538,47743133 Gene ID= ENSG00000024422.11 TPM= 5.89 Transcript Type= NA chr19 47713387 47737699 47713387 47737699 + transcript5191.chr19.nnic@EHD2 transcript5191.chr19.nnic protein_coding 47713387,47716558,47718509,47725812,47736369,47736866 47713538,47717016,47718606,47726224,47736533,47737699 Gene ID= ENSG00000024422.11 TPM= 1.81 Transcript Type= NA chr19 47713343 47743134 47713343 47743134 + ENST00000263277.7@EHD2 ENST00000263277.7 protein_coding 47713343,47716558,47718509,47725812,47736369,47740881 47713538,47717016,47718606,47726224,47736533,47743134 Gene ID= ENSG00000024422.11 TPM= 82.4 Transcript Type= protein_coding chr19 47713423 47743132 47713423 47743132 + transcript5196.chr19.nnic@EHD2 transcript5196.chr19.nnic protein_coding 47713423,47718509,47725812,47740881 47713538,47718606,47726224,47743132 Gene ID= ENSG00000024422.11 TPM= 28.52 Transcript Type= NA chr19 47745498 47758208 47745498 47758208 + transcript5211.chr19.nnic@NOP53 transcript5211.chr19.nnic protein_coding 47745498,47746967,47750178,47750908,47751520,47752512,47754527,47754709,47755348,47755756,47756688,47756999 47745783,47747031,47750286,47751107,47751590,47752607,47754631,47754891,47755523,47755822,47756744,47758208 Gene ID= ENSG00000105373.18 TPM= 33.8 Transcript Type= NA chr19 47745522 47757058 47745522 47757058 + ENST00000246802.9@NOP53 ENST00000246802.9 protein_coding 47745522,47746967,47750178,47750908,47751520,47752512,47754527,47754709,47755348,47755756,47756528,47756688,47756999 47745783,47747031,47750286,47751107,47751590,47752607,47754631,47754891,47755523,47755822,47756604,47756744,47757058 Gene ID= ENSG00000105373.18 TPM= 350.15 Transcript Type= protein_coding chr19 47778572 47784681 47778572 47784681 + ENST00000601048.5@SELENOW ENST00000601048.5 protein_coding 47778572,47780725,47780864,47781108,47781290,47784290 47778814,47780749,47780917,47781182,47781388,47784681 Gene ID= ENSG00000178980.14 TPM= 136.74 Transcript Type= protein_coding chr19 47863402 47885726 47863402 47885726 - transcript5225.chr19.nnic@SULT2A1 transcript5225.chr19.nnic protein_coding 47885488,47883577,47882084,47879036,47874657,47871056,47869040,47865271,47863402 47885726,47883785,47882210,47879130,47874834,47871567,47869515,47865455,47864026 Gene ID= ENSG00000105398.3 TPM= 4.41 Transcript Type= NA chr19 47863291 47886334 47863291 47886334 - transcript5231.chr19.nnic@SULT2A1 transcript5231.chr19.nnic protein_coding 47886122,47883577,47882084,47879036,47874657,47871374,47863291 47886334,47883785,47882210,47879130,47874834,47871567,47865455 Gene ID= ENSG00000105398.3 TPM= 3.8 Transcript Type= NA chr19 47867518 47886547 47867518 47886547 - transcript5232.chr19.nnic@SULT2A1 transcript5232.chr19.nnic protein_coding 47886122,47883577,47882084,47879036,47874657,47871153,47867518 47886547,47883785,47882210,47879130,47874834,47871567,47867952 Gene ID= ENSG00000105398.3 TPM= 19.68 Transcript Type= NA chr19 47867562 47886547 47867562 47886547 - transcript5235.chr19.nnic@SULT2A1 transcript5235.chr19.nnic protein_coding 47886122,47883577,47882084,47879036,47874657,47871056,47867562 47886547,47883785,47882210,47879130,47874834,47871567,47869515 Gene ID= ENSG00000105398.3 TPM= 30.25 Transcript Type= NA chr19 48047844 48110859 48047844 48110859 - transcript5243.chr19.nnic@PLA2G4C transcript5243.chr19.nnic protein_coding 48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48054878,48052997,48047844 48110859,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088745,48085112,48077824,48074874,48067886,48062152,48055049,48053147,48048388 Gene ID= ENSG00000105499.13 TPM= 3.85 Transcript Type= NA chr19 48061360 48110859 48061360 48110859 - transcript5253.chr19.nic@PLA2G4C transcript5253.chr19.nic protein_coding 48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48061360 48110859,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088712,48085112,48077824,48074874,48067886,48062152,48061837 Gene ID= ENSG00000105499.13 TPM= 5.43 Transcript Type= NA chr19 48047844 48110782 48047844 48110782 - ENST00000354276.7@PLA2G4C ENST00000354276.7 protein_coding 48110487,48106522,48105333,48104588,48099671,48098139,48095464,48090364,48088686,48085059,48077771,48074767,48067791,48061998,48054878,48052954,48047844 48110782,48106561,48105444,48104724,48099860,48098259,48095604,48090417,48088712,48085112,48077824,48074874,48067886,48062152,48055049,48053147,48048388 Gene ID= ENSG00000105499.13 TPM= 13.81 Transcript Type= protein_coding chr19 48115445 48170603 48115445 48170603 - ENST00000263274.11@LIG1 ENST00000263274.11 protein_coding 48170241,48165550,48162262,48161372,48157014,48153872,48151232,48150088,48149763,48143883,48143543,48139971,48137522,48137008,48136034,48135680,48133981,48132982,48131076,48127910,48127277,48123174,48122934,48121170,48119137,48117638,48115873,48115445 48170603,48165623,48162351,48161507,48157140,48153967,48151339,48150210,48149841,48143963,48143599,48140143,48137688,48137084,48136125,48135779,48134066,48133097,48131171,48128020,48127348,48123318,48123016,48121322,48119190,48117781,48115965,48115732 Gene ID= ENSG00000105486.13 TPM= 34.41 Transcript Type= protein_coding chr19 48115450 48170344 48115450 48170344 - ENST00000427526.6@LIG1 ENST00000427526.6 protein_coding 48170241,48165550,48161372,48157014,48153872,48151232,48150088,48149763,48143883,48143543,48139971,48137522,48137008,48136034,48135680,48133981,48132982,48131076,48127910,48127277,48123174,48122934,48121170,48119137,48117638,48115873,48115450 48170344,48165623,48161507,48157140,48153967,48151336,48150210,48149841,48143963,48143599,48140143,48137688,48137084,48136125,48135779,48134066,48133097,48131171,48128020,48127348,48123318,48123016,48121322,48119190,48117781,48115965,48115732 Gene ID= ENSG00000105486.13 TPM= 5.43 Transcript Type= protein_coding chr19 48208105 48255911 48208105 48255911 - transcript5266.chr19.nic@CARD8 transcript5266.chr19.nic protein_coding 48255792,48249751,48240962,48238383,48234403,48232453,48231660,48230777,48230438,48221730,48218871,48215340,48208105 48255911,48249847,48241063,48238532,48234543,48232493,48231810,48231006,48230700,48221855,48219012,48215384,48211975 Gene ID= ENSG00000105483.17 TPM= 4.53 Transcript Type= NA chr19 48255675 48258199 48255675 48258199 + ENST00000602172.1@CARD8-AS1 ENST00000602172.1 antisense_RNA 48255675,48256351 48255794,48258199 Gene ID= ENSG00000268001.1 TPM= 6.34 Transcript Type= antisense_RNA chr19 48325325 48330553 48325325 48330553 + ENST00000270221.10@EMP3 ENST00000270221.10 protein_coding 48325325,48326830,48327521,48329352,48330301 48325610,48326922,48327623,48329492,48330553 Gene ID= ENSG00000142227.10 TPM= 122.4 Transcript Type= protein_coding chr19 48325581 48330553 48325581 48330553 + ENST00000597279.5@EMP3 ENST00000597279.5 protein_coding 48325581,48325991,48326830,48327521,48329352,48330301 48325610,48326053,48326922,48327623,48329492,48330553 Gene ID= ENSG00000142227.10 TPM= 11.02 Transcript Type= protein_coding chr19 48325347 48330553 48325347 48330553 + ENST00000596315.5@EMP3 ENST00000596315.5 protein_coding 48325347,48327521,48329352,48330301 48325610,48327623,48329492,48330553 Gene ID= ENSG00000142227.10 TPM= 13.28 Transcript Type= protein_coding chr19 48332355 48363940 48332355 48363940 - transcript5280.chr19.nnic@TMEM143 transcript5280.chr19.nnic protein_coding 48363898,48363291,48360072,48345160,48343253,48342530,48334008,48332355 48363940,48363531,48360176,48345354,48343451,48343162,48334197,48333433 Gene ID= ENSG00000161558.10 TPM= 2.26 Transcript Type= NA chr19 48332356 48364237 48332356 48364237 - ENST00000293261.7@TMEM143 ENST00000293261.7 protein_coding 48363898,48363291,48360072,48345160,48343321,48342530,48334008,48332356 48364237,48363531,48360176,48345354,48343451,48342809,48334197,48333433 Gene ID= ENSG00000161558.10 TPM= 37.58 Transcript Type= protein_coding chr19 48382570 48391553 48382570 48391553 - ENST00000330720.6@KDELR1 ENST00000330720.6 protein_coding 48391268,48390424,48389553,48384230,48382570 48391553,48390524,48389711,48384482,48383327 Gene ID= ENSG00000105438.8 TPM= 106.85 Transcript Type= protein_coding chr19 48382578 48390855 48382578 48390855 - ENST00000597017.5@KDELR1 ENST00000597017.5 protein_coding 48390424,48389553,48384230,48382578 48390855,48389711,48384482,48383327 Gene ID= ENSG00000105438.8 TPM= 9.06 Transcript Type= protein_coding chr19 48415733 48444929 48415733 48444929 + transcript5296.chr19.nnic@GRIN2D transcript5296.chr19.nnic protein_coding 48415733,48416002,48419234,48419585,48421785,48441769,48442150,48442600 48415777,48416155,48419359,48419814,48421945,48441956,48442382,48444929 Gene ID= ENSG00000105464.3 TPM= 1.81 Transcript Type= NA chr19 48445773 48457022 48445773 48457022 + ENST00000253237.9@GRWD1 ENST00000253237.9 protein_coding 48445773,48446385,48446681,48450313,48450666,48451034,48452708 48446192,48446502,48446843,48450526,48450808,48451231,48457022 Gene ID= ENSG00000105447.12 TPM= 117.72 Transcript Type= protein_coding chr19 48469220 48482313 48469220 48482313 + transcript5303.chr19.nnic@CYTH2 transcript5303.chr19.nnic protein_coding 48469220,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123,48479925 48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48479799,48482313 Gene ID= ENSG00000105443.14 TPM= 29.43 Transcript Type= NA chr19 48469032 48482314 48469032 48482314 + ENST00000452733.6@CYTH2 ENST00000452733.6 protein_coding 48469032,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478069,48478275,48478438,48479123 48469526,48470500,48470669,48472443,48473378,48474017,48474330,48474949,48478145,48478346,48478592,48482314 Gene ID= ENSG00000105443.14 TPM= 30.34 Transcript Type= protein_coding chr19 48469347 48479382 48469347 48479382 + ENST00000493260.5@CYTH2 ENST00000493260.5 protein_coding 48469347,48470353,48470603,48472325,48473298,48473905,48474182,48474838,48478275,48478438,48479123 48469526,48470500,48470669,48472443,48473378,48474017,48474330,48478145,48478346,48478592,48479382 Gene ID= ENSG00000105443.14 TPM= 1.81 Transcript Type= retained_intron chr19 48615328 48619536 48615328 48619536 - ENST00000549920.5@RPL18 ENST00000549920.5 protein_coding 48619141,48617791,48617316,48616726,48616079,48615877,48615328 48619536,48617877,48617423,48616824,48616202,48615946,48615447 Gene ID= ENSG00000063177.12 TPM= 213.55 Transcript Type= protein_coding chr19 48615331 48617884 48615331 48617884 - ENST00000084795.9@RPL18 ENST00000084795.9 protein_coding 48617791,48617316,48616726,48616079,48615877,48615331 48617884,48617423,48616824,48616202,48615946,48615447 Gene ID= ENSG00000063177.12 TPM= 59.61 Transcript Type= protein_coding chr19 48615336 48619176 48615336 48619176 - ENST00000549370.5@RPL18 ENST00000549370.5 protein_coding 48619141,48617791,48617316,48616726,48616079,48615877,48615336 48619176,48617877,48617415,48616824,48616202,48615946,48615447 Gene ID= ENSG00000063177.12 TPM= 6.64 Transcript Type= nonsense_mediated_decay chr19 48624368 48630406 48624368 48630406 + transcript5318.chr19.nic@SPHK2 transcript5318.chr19.nic protein_coding 48624368,48625891,48627692,48627975,48628162,48628681 48624430,48626362,48627841,48628069,48628277,48630406 Gene ID= ENSG00000063176.15 TPM= 7.38 Transcript Type= NA chr19 48619291 48630406 48619291 48630406 + ENST00000340932.7@SPHK2 ENST00000340932.7 protein_coding 48619291,48620402,48627692,48627975,48628162,48628681 48619543,48620553,48627841,48628069,48628277,48630406 Gene ID= ENSG00000063176.15 TPM= 4.89 Transcript Type= protein_coding chr19 48619534 48630405 48619534 48630405 + ENST00000598088.5@SPHK2 ENST00000598088.5 protein_coding 48619534,48620402,48625891,48627692,48627975,48628162,48628681 48619689,48620553,48626362,48627841,48628069,48628277,48630405 Gene ID= ENSG00000063176.15 TPM= 17.34 Transcript Type= protein_coding chr19 48624952 48630405 48624952 48630405 + ENST00000599748.5@SPHK2 ENST00000599748.5 protein_coding 48624952,48625891,48627692,48627975,48628162,48628681 48625076,48626362,48627841,48628069,48628277,48630405 Gene ID= ENSG00000063176.15 TPM= 7.38 Transcript Type= protein_coding chr19 48630559 48636479 48630559 48636479 - transcript5321.chr19.nnic@DBP transcript5321.chr19.nnic protein_coding 48636416,48635580,48633444,48630559 48636479,48635990,48633655,48631052 Gene ID= ENSG00000105516.10 TPM= 4.53 Transcript Type= NA chr19 48637954 48646399 48637954 48646399 - transcript5327.chr19.nnic@CA11 transcript5327.chr19.nnic protein_coding 48645566,48645403,48644427,48640095,48639788,48639549,48639305,48638888,48638240,48637954 48646399,48645477,48644569,48640280,48639883,48639621,48639459,48639053,48638435,48638144 Gene ID= ENSG00000063180.8 TPM= 10.87 Transcript Type= NA chr19 48712742 48719721 48712742 48719721 - ENST00000318083.10@MAMSTR ENST00000318083.10 protein_coding 48719679,48718974,48716705,48715625,48715262,48714806,48714366,48713860,48713716,48712742 48719721,48719052,48716743,48715767,48715446,48714908,48714560,48714045,48713770,48713550 Gene ID= ENSG00000176909.11 TPM= 32.6 Transcript Type= protein_coding chr19 48720581 48741595 48720581 48741595 - transcript5338.chr19.nic@RASIP1 transcript5338.chr19.nic protein_coding 48741301,48740521,48740146,48738960,48735196,48728937,48727393,48727007,48726785,48724717,48724337,48721854,48720581 48741595,48741028,48740286,48739645,48735551,48729590,48727430,48727158,48726888,48724960,48724509,48722001,48720997 Gene ID= ENSG00000105538.9 TPM= 42.11 Transcript Type= NA chr19 48748013 48753668 48748013 48753668 - transcript5345.chr19.nic@FUT1 transcript5345.chr19.nic protein_coding 48753325,48752892,48752490,48748013 48753668,48753122,48752725,48751283 Gene ID= ENSG00000174951.10 TPM= 5.43 Transcript Type= NA chr19 48795066 48811020 48795066 48811020 - ENST00000316273.10@BCAT2 ENST00000316273.10 protein_coding 48810984,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795066 48811020,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464 Gene ID= ENSG00000105552.14 TPM= 177.79 Transcript Type= protein_coding chr19 48795065 48811027 48795065 48811027 - ENST00000402551.5@BCAT2 ENST00000402551.5 protein_coding 48810984,48807756,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795065 48811027,48808236,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464 Gene ID= ENSG00000105552.14 TPM= 8.9 Transcript Type= protein_coding chr19 48795062 48811012 48795062 48811012 - ENST00000545387.6@BCAT2 ENST00000545387.6 protein_coding 48810984,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795062 48811012,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464 Gene ID= ENSG00000105552.14 TPM= 8.9 Transcript Type= protein_coding chr19 48795110 48810916 48795110 48810916 - ENST00000597011.5@BCAT2 ENST00000597011.5 protein_coding 48810809,48807000,48806517,48800187,48799981,48799675,48797191,48796937,48796578,48796428,48795110 48810916,48807074,48806717,48800297,48800100,48799838,48797333,48797022,48796718,48796502,48795464 Gene ID= ENSG00000105552.14 TPM= 1.81 Transcript Type= protein_coding chr19 48813020 48836718 48813020 48836718 - transcript5355.chr19.nic@HSD17B14 transcript5355.chr19.nic protein_coding 48836324,48835805,48834276,48832666,48831668,48815037,48813663,48813020 48836718,48835843,48834358,48832732,48831759,48815141,48813730,48813348 Gene ID= ENSG00000087076.8 TPM= 9.96 Transcript Type= NA chr19 48813017 48836678 48813017 48836678 - ENST00000263278.8@HSD17B14 ENST00000263278.8 protein_coding 48836324,48835805,48834276,48832666,48831668,48815037,48813663,48813456,48813017 48836678,48835843,48834358,48832732,48831759,48815141,48813730,48813552,48813348 Gene ID= ENSG00000087076.8 TPM= 29.88 Transcript Type= protein_coding chr19 48837092 48868591 48837092 48868591 - transcript5364.chr19.nnic@PLEKHA4 transcript5364.chr19.nnic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837092 48868591,48867626,48865610,48861692,48861514,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 1.92 Transcript Type= NA chr19 48837092 48868661 48837092 48868661 - transcript5370.chr19.nic@PLEKHA4 transcript5370.chr19.nic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837092 48868661,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 7.35 Transcript Type= NA chr19 48837092 48868661 48837092 48868661 - transcript5371.chr19.nic@PLEKHA4 transcript5371.chr19.nic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837092 48868661,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 2.83 Transcript Type= NA chr19 48837092 48868373 48837092 48868373 - transcript5372.chr19.nnic@PLEKHA4 transcript5372.chr19.nnic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837092 48868373,48867626,48865610,48861692,48861514,48860459,48859684,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845465,48841310,48839263,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 1.92 Transcript Type= NA chr19 48837092 48868661 48837092 48868661 - transcript5373.chr19.nnic@PLEKHA4 transcript5373.chr19.nnic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48839205,48838017,48837092 48868661,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48839263,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 1.92 Transcript Type= NA chr19 48837092 48868661 48837092 48868661 - transcript5374.chr19.nic@PLEKHA4 transcript5374.chr19.nic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48838017,48837092 48868661,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 10.98 Transcript Type= NA chr19 48837092 48868661 48837092 48868661 - transcript5377.chr19.nic@PLEKHA4 transcript5377.chr19.nic protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48838017,48837092 48868661,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 1.92 Transcript Type= NA chr19 48837097 48868632 48837097 48868632 - ENST00000263265.10@PLEKHA4 ENST00000263265.10 protein_coding 48868083,48867537,48865503,48861620,48861401,48860350,48859469,48858860,48857422,48854217,48854007,48853682,48852228,48847900,48845517,48845370,48841149,48839205,48838017,48837097 48868632,48867626,48865610,48861692,48861501,48860459,48859684,48859139,48857496,48854264,48854087,48853831,48852326,48848040,48845616,48845446,48841310,48839263,48838129,48837551 Gene ID= ENSG00000105559.11 TPM= 44.48 Transcript Type= protein_coding chr19 48872392 48876057 48872392 48876057 + ENST00000200453.5@PPP1R15A ENST00000200453.5 protein_coding 48872392,48873225,48875614 48872651,48874898,48876057 Gene ID= ENSG00000087074.7 TPM= 230.91 Transcript Type= protein_coding chr19 48900050 48923372 48900050 48923372 + ENST00000405315.8@NUCB1 ENST00000405315.8 protein_coding 48900050,48900786,48904347,48905753,48911149,48913011,48913474,48918726,48919030,48919194,48921154,48921827,48922318 48900372,48900931,48904454,48905885,48911252,48913196,48913564,48918784,48919122,48919286,48921324,48921932,48923372 Gene ID= ENSG00000104805.15 TPM= 720.81 Transcript Type= protein_coding chr19 48954855 48961798 48954855 48961798 + transcript5395.chr19.nnic@BAX transcript5395.chr19.nnic protein_coding 48954855,48955548,48955687,48956198,48960810,48961483 48954962,48955599,48955833,48956333,48960914,48961798 Gene ID= ENSG00000087088.19 TPM= 3.32 Transcript Type= NA chr19 48954877 48961798 48954877 48961798 + ENST00000345358.11@BAX ENST00000345358.11 protein_coding 48954877,48955548,48955687,48956198,48960810,48961532 48954962,48955599,48955833,48956333,48960914,48961798 Gene ID= ENSG00000087088.19 TPM= 44.07 Transcript Type= protein_coding chr19 48954929 48961798 48954929 48961798 + ENST00000293288.12@BAX ENST00000293288.12 protein_coding 48954929,48955548,48955687,48956198,48960810 48954962,48955599,48955833,48956333,48961798 Gene ID= ENSG00000087088.19 TPM= 2.72 Transcript Type= protein_coding chr19 48954929 48961795 48954929 48961795 + ENST00000391871.4@BAX ENST00000391871.4 protein_coding 48954929,48955687,48955715,48956198,48960810,48961532 48954964,48955713,48955833,48956333,48960914,48961795 Gene ID= ENSG00000087088.19 TPM= 2.42 Transcript Type= protein_coding chr19 48965301 48966878 48965301 48966878 + ENST00000331825.10@FTL ENST00000331825.10 protein_coding 48965301,48965770,48966281,48966583 48965609,48965916,48966406,48966878 Gene ID= ENSG00000087086.14 TPM= 4409.1 Transcript Type= protein_coding chr19 48968126 48993331 48968126 48993331 - transcript5424.chr19.nnic@GYS1 transcript5424.chr19.nnic protein_coding 48992995,48987194,48985850,48985461,48982720,48982255,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968126 48993331,48987385,48986035,48985605,48982837,48982375,48981636,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611 Gene ID= ENSG00000104812.14 TPM= 4.83 Transcript Type= NA chr19 48968126 48993309 48968126 48993309 - transcript5433.chr19.nnic@GYS1 transcript5433.chr19.nnic protein_coding 48993206,48982255,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968126 48993309,48982375,48981636,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611 Gene ID= ENSG00000104812.14 TPM= 7.54 Transcript Type= NA chr19 48968125 48993309 48968125 48993309 - ENST00000323798.7@GYS1 ENST00000323798.7 protein_coding 48992995,48991302,48987194,48985850,48985461,48982720,48982255,48981530,48978098,48977924,48974620,48974213,48970928,48970546,48969775,48968125 48993309,48991483,48987385,48986035,48985605,48982837,48982375,48981636,48978157,48978002,48974733,48974339,48971023,48970709,48969855,48969611 Gene ID= ENSG00000104812.14 TPM= 63.69 Transcript Type= protein_coding chr19 48993448 49015995 48993448 49015995 + ENST00000595090.5@RUVBL2 ENST00000595090.5 protein_coding 48993448,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010488,49010999,49011192,49014484,49015021,49015572,49015817 48993923,48999373,49003334,49004418,49007147,49007368,49009882,49010066,49010611,49011093,49011310,49014603,49015150,49015686,49015995 Gene ID= ENSG00000183207.13 TPM= 109.57 Transcript Type= protein_coding chr19 48993888 49015925 48993888 49015925 + transcript5431.chr19.nic@RUVBL2 transcript5431.chr19.nic protein_coding 48993888,48999319,49003279,49004277,49007018,49007302,49009776,49009973,49010999,49011192,49014484,49015021,49015572,49015817 48993923,48999373,49003334,49004418,49007147,49007368,49009882,49010611,49011093,49011310,49014603,49015150,49015686,49015925 Gene ID= ENSG00000183207.13 TPM= 5.43 Transcript Type= NA chr19 49015981 49019516 49015981 49019516 - transcript5438.chr19.nic@AC008687.4 transcript5438.chr19.nic protein_coding 49019214,49018873,49016547,49015981 49019516,49019000,49018340,49016310 Gene ID= ENSG00000268655.2 TPM= 3.62 Transcript Type= NA chr19 49085173 49108612 49085173 49108612 + transcript5455.chr19.nic@SNRNP70 transcript5455.chr19.nic protein_coding 49085173,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107795 49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108612 Gene ID= ENSG00000104852.14 TPM= 181.11 Transcript Type= NA chr19 49085267 49108605 49085267 49108605 + transcript5456.chr19.nic@SNRNP70 transcript5456.chr19.nic protein_coding 49085267,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49107625,49107822 49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108605 Gene ID= ENSG00000104852.14 TPM= 82.4 Transcript Type= NA chr19 49085451 49108563 49085451 49108563 + ENST00000221448.9@SNRNP70 ENST00000221448.9 protein_coding 49085451,49086405,49090291,49090466,49098427,49098642,49101390,49104634,49107625,49107822 49085636,49086561,49090353,49090520,49098491,49098704,49101471,49104735,49107712,49108563 Gene ID= ENSG00000104852.14 TPM= 32.6 Transcript Type= protein_coding chr19 49085419 49108598 49085419 49108598 + ENST00000601065.5@SNRNP70 ENST00000601065.5 protein_coding 49085419,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795 49085636,49086561,49090353,49090520,49098491,49098704,49101471,49102173,49104735,49107712,49108598 Gene ID= ENSG00000104852.14 TPM= 14.79 Transcript Type= nonsense_mediated_decay chr19 49085495 49108605 49085495 49108605 + ENST00000595231.5@SNRNP70 ENST00000595231.5 protein_coding 49085495,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107822 49085636,49086561,49090353,49090520,49098491,49098704,49101471,49102185,49104735,49107712,49108605 Gene ID= ENSG00000104852.14 TPM= 13.88 Transcript Type= nonsense_mediated_decay chr19 49085451 49108603 49085451 49108603 + ENST00000401730.5@SNRNP70 ENST00000401730.5 protein_coding 49085451,49086405,49090291,49090466,49098427,49098642,49101390,49102114,49104634,49107625,49107795 49085636,49086561,49090353,49090520,49098491,49098704,49101471,49103587,49104735,49107712,49108603 Gene ID= ENSG00000104852.14 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr19 49114361 49118460 49114361 49118460 + ENST00000221459.6@LIN7B ENST00000221459.6 protein_coding 49114361,49114849,49115260,49116263,49117855,49118352 49114441,49114967,49115331,49116472,49118018,49118460 Gene ID= ENSG00000104863.11 TPM= 2.26 Transcript Type= protein_coding chr19 49114324 49118460 49114324 49118460 + ENST00000391864.7@LIN7B ENST00000391864.7 protein_coding 49114324,49114849,49115260,49117855,49118352 49114441,49114967,49115331,49118018,49118460 Gene ID= ENSG00000104863.11 TPM= 1.36 Transcript Type= protein_coding chr19 49149958 49151021 49149958 49151021 + ENST00000602783.1@PPFIA3 ENST00000602783.1 protein_coding 49149958,49150236 49150151,49151021 Gene ID= ENSG00000177380.13 TPM= 5.43 Transcript Type= retained_intron chr19 49151198 49155424 49151198 49155424 - ENST00000252825.8@HRC ENST00000252825.8 protein_coding 49153407,49153261,49152310,49152004,49151517,49151198 49155424,49153331,49152378,49152058,49151553,49151332 Gene ID= ENSG00000130528.11 TPM= 4.53 Transcript Type= protein_coding chr19 49157746 49211834 49157746 49211834 + transcript5483.chr19.nic@TRPM4 transcript5483.chr19.nic protein_coding 49157746,49158192,49166041,49167917,49168260,49168553,49171357,49171578,49172009,49181349,49182578,49183078,49188641,49188946,49190208,49190696,49196440,49200300,49200611,49201964,49210209,49210710,49211015,49211164,49211494 49157890,49158259,49166215,49168097,49168423,49168736,49171418,49171769,49172108,49181461,49182867,49183212,49188770,49189091,49190320,49190773,49196874,49200432,49200785,49202141,49210405,49210842,49211087,49211269,49211834 Gene ID= ENSG00000130529.15 TPM= 4.53 Transcript Type= NA chr19 49157741 49211836 49157741 49211836 + ENST00000252826.9@TRPM4 ENST00000252826.9 protein_coding 49157741,49158192,49166041,49167917,49168260,49168553,49171357,49171578,49172009,49181349,49182578,49183078,49188641,49188946,49190208,49190696,49196440,49200300,49200611,49201964,49210209,49210710,49211015,49211164,49211494 49157890,49158259,49166215,49168097,49168423,49168736,49171418,49171769,49172108,49181461,49182922,49183212,49188770,49189091,49190320,49190773,49196874,49200432,49200785,49202141,49210405,49210842,49211087,49211269,49211836 Gene ID= ENSG00000130529.15 TPM= 26.26 Transcript Type= protein_coding chr19 49157746 49208630 49157746 49208630 + transcript5487.chr19.nnic@TRPM4 transcript5487.chr19.nnic protein_coding 49157746,49158192,49166041,49167917,49168260,49168553,49171357,49171578,49172009,49181349,49182578,49183078,49188641,49188946,49190208,49190696,49196440,49200300,49200611,49201964,49207809 49157890,49158259,49166215,49168097,49168423,49168736,49171418,49171769,49172108,49181461,49182922,49183212,49188770,49189091,49190320,49190773,49196874,49200432,49200785,49202141,49208630 Gene ID= ENSG00000130529.15 TPM= 2.72 Transcript Type= NA chr19 49210690 49211834 49210690 49211834 + transcript5489.chr19.nic@TRPM4 transcript5489.chr19.nic protein_coding 49210690,49211015,49211164,49211494 49210842,49211087,49211269,49211834 Gene ID= ENSG00000130529.15 TPM= 1.81 Transcript Type= NA chr19 49335400 49340606 49335400 49340606 + ENST00000323906.8@CD37 ENST00000323906.8 protein_coding 49335400,49335714,49336909,49337147,49337925,49338700,49339330,49340251 49335609,49335786,49337033,49337221,49338029,49338936,49339413,49340606 Gene ID= ENSG00000104894.11 TPM= 9.06 Transcript Type= protein_coding chr19 49340595 49362382 49340595 49362382 - ENST00000593945.5@TEAD2 ENST00000593945.5 protein_coding 49362333,49359844,49359435,49357252,49355959,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595 49362382,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437 Gene ID= ENSG00000074219.13 TPM= 3.55 Transcript Type= protein_coding chr19 49340599 49362416 49340599 49362416 - transcript5496.chr19.nic@TEAD2 transcript5496.chr19.nic protein_coding 49362373,49359844,49359435,49357252,49355959,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340599 49362416,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437 Gene ID= ENSG00000074219.13 TPM= 7.17 Transcript Type= NA chr19 49340599 49362416 49340599 49362416 - transcript5497.chr19.nnic@TEAD2 transcript5497.chr19.nnic protein_coding 49362373,49359844,49359435,49357252,49355959,49355312,49355148,49351301,49348703,49347190,49343270,49342438,49340599 49362416,49360081,49359499,49357314,49355970,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437 Gene ID= ENSG00000074219.13 TPM= 2.49 Transcript Type= NA chr19 49340595 49362457 49340595 49362457 - ENST00000311227.6@TEAD2 ENST00000311227.6 protein_coding 49362373,49359844,49359435,49357252,49355312,49355148,49351301,49348703,49347190,49343231,49342438,49340595 49362457,49360081,49359499,49357314,49355419,49355206,49351365,49348845,49347363,49343398,49342590,49341437 Gene ID= ENSG00000074219.13 TPM= 15.77 Transcript Type= protein_coding chr19 49429401 49441551 49429401 49441551 - ENST00000221485.7@SLC17A7 ENST00000221485.7 protein_coding 49441318,49436549,49435168,49434768,49434602,49433960,49433726,49432811,49432519,49431338,49431015,49429401 49441551,49436801,49435286,49434882,49434689,49434046,49433868,49432960,49432651,49431448,49431142,49430812 Gene ID= ENSG00000104888.9 TPM= 3.62 Transcript Type= protein_coding chr19 49446298 49453507 49446298 49453507 - transcript5525.chr19.nic@PIH1D1 transcript5525.chr19.nic protein_coding 49453376,49451485,49450782,49449475,49448001,49447827,49447338,49447024,49446551,49446298 49453507,49451578,49450848,49449654,49448062,49447908,49447467,49447099,49446694,49446423 Gene ID= ENSG00000104872.10 TPM= 2.72 Transcript Type= NA chr19 49446299 49451810 49446299 49451810 - ENST00000262265.9@PIH1D1 ENST00000262265.9 protein_coding 49451485,49450782,49449475,49448001,49447827,49447338,49447024,49446551,49446299 49451810,49450848,49449654,49448062,49447908,49447467,49447099,49446694,49446423 Gene ID= ENSG00000104872.10 TPM= 58.86 Transcript Type= protein_coding chr19 49453169 49471048 49453169 49471048 + ENST00000293350.8@ALDH16A1 ENST00000293350.8 protein_coding 49453169,49458486,49458960,49459670,49460822,49461619,49461884,49462570,49463854,49464127,49464417,49464632,49465738,49466082,49468381,49468864,49470306 49453421,49458588,49459086,49459848,49460899,49461800,49462036,49462755,49463949,49464263,49464522,49464762,49465905,49466283,49468566,49468986,49471048 Gene ID= ENSG00000161618.9 TPM= 110.02 Transcript Type= protein_coding chr19 49453236 49470585 49453236 49470585 + ENST00000455361.6@ALDH16A1 ENST00000455361.6 protein_coding 49453236,49458486,49458960,49459670,49460822,49461619,49462570,49463854,49464127,49464417,49464632,49465738,49466082,49468381,49468864,49470306 49453421,49458588,49459086,49459848,49460899,49461800,49462755,49463949,49464263,49464522,49464762,49465905,49466283,49468566,49468986,49470585 Gene ID= ENSG00000161618.9 TPM= 2.72 Transcript Type= protein_coding chr19 49474236 49486231 49474236 49486231 + ENST00000204637.6@FLT3LG ENST00000204637.6 protein_coding 49474236,49474603,49475674,49476145,49476423,49478909,49480298,49480552,49486015 49474281,49474672,49475801,49476198,49476566,49479047,49480476,49480620,49486231 Gene ID= ENSG00000090554.12 TPM= 2.72 Transcript Type= protein_coding chr19 49487554 49492308 49487554 49492308 + ENST00000391857.8@RPL13A ENST00000391857.8 protein_coding 49487554,49489850,49490232,49490475,49490779,49491040,49491425,49491729 49487644,49489922,49490297,49490576,49490864,49491099,49491547,49492308 Gene ID= ENSG00000142541.16 TPM= 1647.34 Transcript Type= protein_coding chr19 49487603 49492308 49487603 49492308 + ENST00000624069.3@RPL13A ENST00000624069.3 protein_coding 49487603,49489850,49490232,49490475,49490779,49491040,49491425,49491729 49487644,49489912,49490297,49490576,49490864,49491099,49491547,49492308 Gene ID= ENSG00000142541.16 TPM= 50.86 Transcript Type= nonsense_mediated_decay chr19 49496374 49499689 49496374 49499689 + ENST00000270625.6@RPS11 ENST00000270625.6 protein_coding 49496374,49497194,49497520,49497917,49499512 49496471,49497325,49497595,49498046,49499689 Gene ID= ENSG00000142534.6 TPM= 148.06 Transcript Type= protein_coding chr19 49496370 49499689 49496370 49499689 + ENST00000599167.5@RPS11 ENST00000599167.5 protein_coding 49496370,49497194,49499512 49496471,49498046,49499689 Gene ID= ENSG00000142534.6 TPM= 4.53 Transcript Type= retained_intron chr19 49496431 49499689 49496431 49499689 + ENST00000602252.5@RPS11 ENST00000602252.5 protein_coding 49496431,49497194,49497917,49499512 49496471,49497595,49498046,49499689 Gene ID= ENSG00000142534.6 TPM= 7.7 Transcript Type= retained_intron chr19 49512279 49526333 49512279 49526333 + ENST00000221466.9@FCGRT ENST00000221466.9 protein_coding 49512279,49513387,49513882,49514211,49524507,49525457,49526010 49512750,49513473,49514133,49514486,49524776,49525573,49526333 Gene ID= ENSG00000104870.12 TPM= 218.26 Transcript Type= protein_coding chr19 49513154 49526333 49513154 49526333 + ENST00000426395.7@FCGRT ENST00000426395.7 protein_coding 49513154,49513882,49514211,49524507,49525457,49526010 49513473,49514133,49514486,49524776,49525573,49526333 Gene ID= ENSG00000104870.12 TPM= 202.87 Transcript Type= protein_coding chr19 49527618 49543638 49527618 49543638 + ENST00000270645.7@RCN3 ENST00000270645.7 protein_coding 49527618,49528467,49534193,49537033,49539119,49542553,49543106 49528058,49528714,49534395,49537205,49539179,49542752,49543638 Gene ID= ENSG00000142552.7 TPM= 29.88 Transcript Type= protein_coding chr19 49555713 49580552 49555713 49580552 - transcript5568.chr19.nnic@NOSIP transcript5568.chr19.nnic protein_coding 49580515,49564155,49560622,49559934,49558897,49557090,49556875,49556549,49556317,49555713 49580552,49564283,49560692,49560039,49558978,49557249,49556993,49556736,49556425,49555822 Gene ID= ENSG00000142546.13 TPM= 4.3 Transcript Type= NA chr19 49555713 49580577 49555713 49580577 - transcript5570.chr19.nnic@NOSIP transcript5570.chr19.nnic protein_coding 49580515,49576759,49560622,49559934,49558897,49557090,49556875,49556549,49556317,49555713 49580577,49576877,49560692,49560039,49558978,49557249,49556993,49556736,49556425,49555822 Gene ID= ENSG00000142546.13 TPM= 5.21 Transcript Type= NA chr19 49555711 49580572 49555711 49580572 - ENST00000596358.5@NOSIP ENST00000596358.5 protein_coding 49580515,49560622,49559934,49558897,49557090,49556875,49556549,49556317,49555711 49580572,49560692,49560039,49558978,49557249,49556993,49556736,49556425,49555822 Gene ID= ENSG00000142546.13 TPM= 34.18 Transcript Type= protein_coding chr19 49555711 49580535 49555711 49580535 - ENST00000598820.5@NOSIP ENST00000598820.5 protein_coding 49580515,49560622,49559934,49557090,49556875,49556549,49556317,49555711 49580535,49560692,49560039,49558978,49556993,49556736,49556425,49555822 Gene ID= ENSG00000142546.13 TPM= 3.4 Transcript Type= retained_intron chr19 49635292 49640201 49635292 49640201 - ENST00000246792.3@RRAS ENST00000246792.3 protein_coding 49639946,49637043,49636824,49636619,49635734,49635292 49640201,49637130,49636926,49636727,49635852,49635660 Gene ID= ENSG00000126458.3 TPM= 83.31 Transcript Type= protein_coding chr19 49635291 49640202 49635291 49640202 - transcript5580.chr19.nic@RRAS transcript5580.chr19.nic protein_coding 49639946,49636824,49636619,49635734,49635291 49640202,49637130,49636727,49635852,49635660 Gene ID= ENSG00000126458.3 TPM= 3.62 Transcript Type= NA chr19 49642125 49658642 49642125 49658642 + ENST00000360565.7@SCAF1 ENST00000360565.7 protein_coding 49642125,49645021,49645354,49646108,49646526,49646715,49650868,49654349,49654652,49657761,49658208 49642242,49645134,49645411,49646202,49646626,49646830,49653705,49654431,49654870,49657889,49658642 Gene ID= ENSG00000126461.14 TPM= 22.64 Transcript Type= protein_coding chr19 49659570 49665797 49659570 49665797 - transcript5587.chr19.nic@IRF3 transcript5587.chr19.nic protein_coding 49665631,49664674,49663343,49663188,49662425,49661450,49660713,49659570 49665797,49664846,49663514,49663258,49662617,49662328,49660828,49659833 Gene ID= ENSG00000126456.15 TPM= 6.34 Transcript Type= NA chr19 49659570 49665786 49659570 49665786 - transcript5589.chr19.nnic@IRF3 transcript5589.chr19.nnic protein_coding 49665672,49664553,49663343,49663188,49662425,49661948,49660713,49659570 49665786,49664673,49663514,49663258,49662617,49662328,49660828,49659833 Gene ID= ENSG00000126456.15 TPM= 2.15 Transcript Type= NA chr19 49659573 49665857 49659573 49665857 - ENST00000597198.5@IRF3 ENST00000597198.5 protein_coding 49665484,49664674,49663343,49663188,49662425,49661948,49660713,49659573 49665857,49664846,49663514,49663258,49662617,49662328,49660828,49659833 Gene ID= ENSG00000126456.15 TPM= 2.44 Transcript Type= protein_coding chr19 49659572 49665875 49659572 49665875 - ENST00000377139.7@IRF3 ENST00000377139.7 protein_coding 49665631,49664674,49663343,49663188,49662425,49661948,49660713,49659572 49665875,49664846,49663514,49663258,49662617,49662328,49660828,49659833 Gene ID= ENSG00000126456.15 TPM= 28.71 Transcript Type= protein_coding chr19 49659570 49665860 49659570 49665860 - transcript5592.chr19.nic@IRF3 transcript5592.chr19.nic protein_coding 49665672,49664674,49663343,49663188,49662425,49661948,49660713,49659570 49665860,49664846,49663514,49663258,49662617,49662328,49660828,49659833 Gene ID= ENSG00000126456.15 TPM= 2.44 Transcript Type= NA chr19 49659570 49664529 49659570 49664529 - transcript5597.chr19.nic@IRF3 transcript5597.chr19.nic protein_coding 49664443,49663343,49663188,49662425,49661948,49660713,49659570 49664529,49663514,49663258,49662617,49662328,49660828,49659833 Gene ID= ENSG00000126456.15 TPM= 8.48 Transcript Type= NA chr19 49659572 49665802 49659572 49665802 - ENST00000601291.5@IRF3 ENST00000601291.5 protein_coding 49665631,49664674,49663343,49663188,49662425,49661948,49660713,49659572 49665802,49664846,49663514,49663258,49662617,49662328,49660844,49659833 Gene ID= ENSG00000126456.15 TPM= 1.06 Transcript Type= protein_coding chr19 49677152 49688447 49677152 49688447 + ENST00000391851.8@PRMT1 ENST00000391851.8 protein_coding 49677152,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162 49677316,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447 Gene ID= ENSG00000126457.21 TPM= 158.4 Transcript Type= protein_coding chr19 49687853 49689029 49687853 49689029 + ENST00000527866.1@PRMT1 ENST00000527866.1 protein_coding 49687853,49688162 49687952,49689029 Gene ID= ENSG00000126457.21 TPM= 3.32 Transcript Type= processed_transcript chr19 49677272 49688447 49677272 49688447 + ENST00000454376.6@PRMT1 ENST00000454376.6 protein_coding 49677272,49679872,49680487,49681910,49682196,49683927,49684754,49684922,49686093,49686605,49688162 49677316,49679925,49680588,49682065,49682259,49684069,49684841,49685037,49686243,49686726,49688447 Gene ID= ENSG00000126457.21 TPM= 28.91 Transcript Type= protein_coding chr19 49691110 49713731 49691110 49713731 + ENST00000323446.9@CPT1C ENST00000323446.9 protein_coding 49691110,49692239,49697326,49700684,49701317,49701497,49704710,49705007,49705214,49705909,49706231,49707518,49708723,49710320,49710723,49711809,49712736,49712972,49713420 49691340,49692393,49697465,49700855,49701418,49701634,49704787,49705114,49705298,49706104,49706413,49707623,49708839,49710484,49710857,49711961,49712849,49713064,49713731 Gene ID= ENSG00000169169.14 TPM= 1.81 Transcript Type= protein_coding chr19 49801580 49807110 49801580 49807110 + transcript5637.chr19.nic@AP2A1 transcript5637.chr19.nic protein_coding 49801580,49801981,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681 49801889,49802141,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807110 Gene ID= ENSG00000196961.12 TPM= 23.65 Transcript Type= NA chr19 49802249 49807110 49802249 49807110 + transcript5642.chr19.nic@AP2A1 transcript5642.chr19.nic protein_coding 49802249,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681 49802599,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807110 Gene ID= ENSG00000196961.12 TPM= 25.46 Transcript Type= NA chr19 49766968 49807112 49766968 49807112 + ENST00000354293.9@AP2A1 ENST00000354293.9 protein_coding 49766968,49781757,49781947,49782531,49791935,49792991,49795630,49798802,49799327,49799629,49799968,49800961,49801390,49801722,49801981,49802949,49803107,49803287,49805453,49805661,49805872,49806119,49806681 49767200,49781825,49782089,49782724,49792064,49793092,49795738,49798952,49799495,49799766,49800150,49801058,49801621,49801889,49802141,49803005,49803189,49803376,49805576,49805777,49805941,49806253,49807112 Gene ID= ENSG00000196961.12 TPM= 296.41 Transcript Type= protein_coding chr19 49806869 49813339 49806869 49813339 - transcript5622.chr19.nic@FUZ transcript5622.chr19.nic protein_coding 49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49808115,49806869 49813339,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49808159,49807374 Gene ID= ENSG00000010361.13 TPM= 6.6 Transcript Type= NA chr19 49806868 49813339 49806868 49813339 - transcript5628.chr19.nic@FUZ transcript5628.chr19.nic protein_coding 49812996,49812447,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806868 49813339,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374 Gene ID= ENSG00000010361.13 TPM= 8.34 Transcript Type= NA chr19 49806897 49813270 49806897 49813270 - ENST00000313777.8@FUZ ENST00000313777.8 protein_coding 49812996,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806897 49813270,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374 Gene ID= ENSG00000010361.13 TPM= 63.5 Transcript Type= protein_coding chr19 49806890 49813249 49806890 49813249 - ENST00000533418.5@FUZ ENST00000533418.5 protein_coding 49813133,49812615,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806890 49813249,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374 Gene ID= ENSG00000010361.13 TPM= 3.97 Transcript Type= protein_coding chr19 49806920 49813273 49806920 49813273 - ENST00000377092.8@FUZ ENST00000377092.8 protein_coding 49812996,49812638,49812251,49811631,49811363,49809378,49809163,49808717,49808574,49808414,49806920 49813273,49812736,49812335,49811699,49811467,49809575,49809258,49808823,49808638,49808488,49807374 Gene ID= ENSG00000010361.13 TPM= 7.24 Transcript Type= nonsense_mediated_decay chr19 49818274 49840383 49818274 49840383 + transcript5653.chr19.nic@MED25 transcript5653.chr19.nic protein_coding 49818274,49818571,49819172,49828449,49828970,49829786,49830088,49830511,49830694,49831333,49831936,49832100,49832308,49834986,49835534,49835727,49836226,49838580 49818475,49818616,49819296,49828547,49829090,49829948,49830218,49830598,49830887,49831461,49832021,49832157,49832415,49835177,49835605,49835945,49836406,49840383 Gene ID= ENSG00000104973.16 TPM= 28.98 Transcript Type= NA chr19 49818289 49836979 49818289 49836979 + ENST00000312865.10@MED25 ENST00000312865.10 protein_coding 49818289,49818571,49819172,49828449,49828970,49829786,49830088,49830511,49830694,49831333,49831936,49832100,49832308,49834986,49835534,49835727,49836226,49836847 49818475,49818616,49819296,49828547,49829090,49829948,49830218,49830598,49830887,49831461,49832021,49832157,49832415,49835177,49835605,49835945,49836406,49836979 Gene ID= ENSG00000104973.16 TPM= 106.85 Transcript Type= protein_coding chr19 49851107 49860746 49851107 49860746 + transcript5709.chr19.nic@PTOV1 transcript5709.chr19.nic protein_coding 49851107,49854406,49854652,49854831,49854970,49857693,49857904,49858057,49858549,49859986,49860268,49860614 49851499,49854543,49854734,49854888,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860746 Gene ID= ENSG00000104960.15 TPM= 19.78 Transcript Type= NA chr19 49850735 49860740 49850735 49860740 + ENST00000601612.5@PTOV1 ENST00000601612.5 protein_coding 49850735,49854406,49854652,49854831,49854970,49856975,49857693,49857909,49858057,49858549,49859986,49860268,49860614 49850955,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740 Gene ID= ENSG00000104960.15 TPM= 3.04 Transcript Type= nonsense_mediated_decay chr19 49851020 49860725 49851020 49860725 + ENST00000598325.5@PTOV1 ENST00000598325.5 protein_coding 49851020,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860614 49851208,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860725 Gene ID= ENSG00000104960.15 TPM= 5.8 Transcript Type= processed_transcript chr19 49851191 49860744 49851191 49860744 + ENST00000599732.5@PTOV1 ENST00000599732.5 protein_coding 49851191,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860614 49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860744 Gene ID= ENSG00000104960.15 TPM= 385.98 Transcript Type= protein_coding chr19 49851159 49860733 49851159 49860733 + ENST00000391842.5@PTOV1 ENST00000391842.5 protein_coding 49851159,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268 49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860733 Gene ID= ENSG00000104960.15 TPM= 2.17 Transcript Type= protein_coding chr19 49851225 49860740 49851225 49860740 + ENST00000601675.5@PTOV1 ENST00000601675.5 protein_coding 49851225,49854406,49854652,49854831,49854970,49856975,49857693,49857904,49858057,49858549,49859986,49860268,49860566 49851499,49854543,49854734,49854888,49855077,49857130,49857782,49857977,49858114,49858653,49860183,49860336,49860740 Gene ID= ENSG00000104960.15 TPM= 15.15 Transcript Type= protein_coding chr19 49861205 49867464 49861205 49867464 - transcript5661.chr19.nic@PNKP transcript5661.chr19.nic protein_coding 49867312,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861205 49867464,49867217,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365 Gene ID= ENSG00000039650.11 TPM= 2.98 Transcript Type= NA chr19 49861205 49867031 49861205 49867031 - transcript5667.chr19.nic@PNKP transcript5667.chr19.nic protein_coding 49866752,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861205 49867031,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365 Gene ID= ENSG00000039650.11 TPM= 6.6 Transcript Type= NA chr19 49861205 49867553 49861205 49867553 - transcript5670.chr19.nic@PNKP transcript5670.chr19.nic protein_coding 49867469,49867054,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861205 49867553,49867217,49866528,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365 Gene ID= ENSG00000039650.11 TPM= 2.98 Transcript Type= NA chr19 49861204 49867886 49861204 49867886 - ENST00000322344.7@PNKP ENST00000322344.7 protein_coding 49867469,49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204 49867886,49867217,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365 Gene ID= ENSG00000039650.11 TPM= 56.41 Transcript Type= protein_coding chr19 49861231 49867286 49861231 49867286 - ENST00000596014.5@PNKP ENST00000596014.5 protein_coding 49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861231 49867286,49866445,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365 Gene ID= ENSG00000039650.11 TPM= 9.96 Transcript Type= protein_coding chr19 49861204 49867234 49861204 49867234 - ENST00000593946.5@PNKP ENST00000593946.5 protein_coding 49867054,49866399,49865127,49864324,49864179,49863964,49863689,49862690,49862538,49862371,49862185,49862044,49861772,49861608,49861449,49861204 49867234,49866528,49865426,49864403,49864236,49864071,49863760,49862738,49862608,49862463,49862281,49862105,49861881,49861695,49861510,49861365 Gene ID= ENSG00000039650.11 TPM= 2.07 Transcript Type= nonsense_mediated_decay chr19 49870441 49877353 49870441 49877353 - transcript5748.chr19.nic@AKT1S1 transcript5748.chr19.nic protein_coding 49876603,49872917,49871812,49870441 49877353,49873302,49871889,49871716 Gene ID= ENSG00000204673.10 TPM= 7.24 Transcript Type= NA chr19 49869039 49877340 49869039 49877340 - ENST00000344175.9@AKT1S1 ENST00000344175.9 protein_coding 49877237,49872917,49871812,49871547,49869039 49877340,49873302,49871889,49871716,49870060 Gene ID= ENSG00000204673.10 TPM= 9.06 Transcript Type= protein_coding chr19 49869039 49877279 49869039 49877279 - ENST00000391832.7@AKT1S1 ENST00000391832.7 protein_coding 49877025,49872917,49871812,49871547,49869039 49877279,49873302,49871889,49871716,49870060 Gene ID= ENSG00000204673.10 TPM= 9.96 Transcript Type= protein_coding chr19 49877458 49888751 49877458 49888751 + transcript5729.chr19.nic@TBC1D17 transcript5729.chr19.nic protein_coding 49877458,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888157,49888424 49877744,49878241,49878572,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888751 Gene ID= ENSG00000104946.12 TPM= 11.41 Transcript Type= NA chr19 49877691 49888751 49877691 49888751 + transcript5732.chr19.nic@TBC1D17 transcript5732.chr19.nic protein_coding 49877691,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888157,49888424 49877744,49878241,49879504,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888751 Gene ID= ENSG00000104946.12 TPM= 5.98 Transcript Type= NA chr19 49877458 49888751 49877458 49888751 + transcript5733.chr19.nic@TBC1D17 transcript5733.chr19.nic protein_coding 49877458,49878143,49878498,49880279,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424 49877744,49878241,49879504,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888751 Gene ID= ENSG00000104946.12 TPM= 14.35 Transcript Type= NA chr19 49877666 49888751 49877666 49888751 + transcript5736.chr19.nic@TBC1D17 transcript5736.chr19.nic protein_coding 49877666,49878143,49878498,49881268,49882041,49882242,49882764,49882973,49883651,49884253,49884459,49884659,49887476,49887718,49888231,49888424 49877744,49878241,49880402,49881475,49882152,49882400,49882892,49883076,49883745,49884369,49884559,49884758,49887573,49887834,49888317,49888751 Gene ID= ENSG00000104946.12 TPM= 12.9 Transcript Type= NA chr19 49889654 49896955 49889654 49896955 - ENST00000391826.6@IL4I1 ENST00000391826.6 protein_coding 49896835,49896148,49895815,49895068,49894268,49891405,49890971,49889654 49896955,49896182,49896053,49895180,49894469,49891473,49891107,49890600 Gene ID= ENSG00000104951.15 TPM= 4.53 Transcript Type= protein_coding chr19 49906828 49929531 49906828 49929531 - transcript5761.chr19.nic@NUP62 transcript5761.chr19.nic protein_coding 49929417,49927694,49906828 49929531,49927815,49909884 Gene ID= ENSG00000213024.11 TPM= 8.76 Transcript Type= NA chr19 49906828 49929504 49906828 49929504 - transcript5764.chr19.nnic@NUP62 transcript5764.chr19.nnic protein_coding 49929417,49927694,49906828 49929504,49927848,49909884 Gene ID= ENSG00000213024.11 TPM= 6.04 Transcript Type= NA chr19 49906825 49929744 49906825 49929744 - ENST00000422090.2@NUP62 ENST00000422090.2 protein_coding 49929326,49906825 49929744,49909884 Gene ID= ENSG00000213024.11 TPM= 40.45 Transcript Type= protein_coding chr19 49928719 49931828 49928719 49931828 + transcript5766.chr19.nic@ATF5 transcript5766.chr19.nic protein_coding 49928719,49929243,49930732 49929006,49929400,49931828 Gene ID= ENSG00000169136.10 TPM= 3.62 Transcript Type= NA chr19 49929143 49933935 49929143 49933935 + ENST00000423777.6@ATF5 ENST00000423777.6 protein_coding 49929143,49930732,49932422 49929400,49931028,49933935 Gene ID= ENSG00000169136.10 TPM= 16.3 Transcript Type= protein_coding chr19 49969664 49975812 49969664 49975812 + transcript5776.chr19.nnic@SIGLEC16 transcript5776.chr19.nnic transcribed_unprocessed_pseudogene 49969664,49969812,49970323,49970924,49971121,49971667,49971844,49972601,49973043,49973495,49974827 49969741,49970191,49970607,49970971,49971384,49971714,49972101,49972694,49973122,49973713,49975812 Gene ID= ENSG00000161643.12 TPM= 1.81 Transcript Type= NA chr19 49976460 50025370 49976460 50025370 - transcript5786.chr19.nic@VRK3 transcript5786.chr19.nic protein_coding 50025346,50020585,50016024,50009236,50007569,50000790,49995191,49994814,49992860,49989639,49988372,49980955,49979083,49976460 50025370,50020647,50016163,50009385,50007826,50000854,49995275,49994919,49992952,49989771,49988492,49981013,49979242,49976784 Gene ID= ENSG00000105053.10 TPM= 1.81 Transcript Type= NA chr19 49981581 50025463 49981581 50025463 - transcript5789.chr19.nic@VRK3 transcript5789.chr19.nic protein_coding 50025346,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49981581 50025463,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49982188 Gene ID= ENSG00000105053.10 TPM= 8.15 Transcript Type= NA chr19 49976467 50025386 49976467 50025386 - ENST00000316763.7@VRK3 ENST00000316763.7 protein_coding 50025267,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49980955,49979083,49976467 50025386,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49981013,49979242,49976784 Gene ID= ENSG00000105053.10 TPM= 13.58 Transcript Type= protein_coding chr19 49981700 50025327 49981700 50025327 - ENST00000594092.5@VRK3 ENST00000594092.5 protein_coding 50025267,50020585,50016024,50009236,50007569,50000790,49997504,49995191,49994814,49992860,49989639,49988372,49981700 50025327,50020647,50016163,50009385,50007826,50000854,49997570,49995275,49994919,49992952,49989771,49988492,49982188 Gene ID= ENSG00000105053.10 TPM= 1.81 Transcript Type= protein_coding chr19 50376469 50382982 50376469 50382982 + ENST00000253727.9@NR1H2 ENST00000253727.9 protein_coding 50376469,50376719,50377587,50377733,50378149,50378522,50379002,50379780,50381966,50382456 50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382982 Gene ID= ENSG00000131408.13 TPM= 246.99 Transcript Type= protein_coding chr19 50376473 50382950 50376473 50382950 + ENST00000599105.5@NR1H2 ENST00000599105.5 protein_coding 50376473,50376719,50377587,50377733,50378149,50378522,50379134,50379780,50381966,50382456 50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382950 Gene ID= ENSG00000131408.13 TPM= 6.34 Transcript Type= protein_coding chr19 50376458 50382978 50376458 50382978 + ENST00000598168.5@NR1H2 ENST00000598168.5 protein_coding 50376458,50376719,50377587,50377733,50378149,50378522,50379092,50379780,50381966,50382456 50376576,50376826,50377648,50377870,50378439,50378796,50379181,50379879,50382174,50382978 Gene ID= ENSG00000131408.13 TPM= 1.58 Transcript Type= protein_coding chr19 50384345 50418017 50384345 50418017 + transcript5817.chr19.nic@POLD1 transcript5817.chr19.nic protein_coding 50384345,50395025,50398851,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842 50384390,50395150,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418017 Gene ID= ENSG00000062822.12 TPM= 6.34 Transcript Type= NA chr19 50384351 50418014 50384351 50418014 + ENST00000599857.5@POLD1 ENST00000599857.5 protein_coding 50384351,50398848,50399371,50401778,50401999,50402205,50402454,50402612,50403053,50403493,50406182,50406407,50406983,50407327,50408785,50409122,50409519,50413426,50413742,50414815,50415438,50415724,50416396,50416610,50417045,50417172,50417842 50384390,50399053,50399484,50401924,50402124,50402373,50402535,50402741,50403219,50403597,50406322,50406517,50407174,50407415,50408901,50409235,50409666,50413521,50413879,50414990,50415590,50415826,50416528,50416723,50417097,50417269,50418014 Gene ID= ENSG00000062822.12 TPM= 24.45 Transcript Type= protein_coding chr19 50476485 50484589 50476485 50484589 + transcript5827.chr19.nnic@EMC10 transcript5827.chr19.nnic protein_coding 50476485,50477929,50478957,50480111,50480581,50480884,50484053 50476658,50478001,50479066,50480215,50480762,50480977,50484589 Gene ID= ENSG00000161671.16 TPM= 2.72 Transcript Type= NA chr19 50476499 50483351 50476499 50483351 + ENST00000376918.7@EMC10 ENST00000376918.7 protein_coding 50476499,50477929,50478957,50480111,50480581,50480884,50481861,50482149 50476658,50478001,50479066,50480215,50480762,50480977,50481947,50483351 Gene ID= ENSG00000161671.16 TPM= 33.51 Transcript Type= protein_coding chr19 50505998 50511353 50505998 50511353 - ENST00000598418.5@JOSD2 ENST00000598418.5 protein_coding 50511117,50510286,50507574,50506378,50505998 50511353,50510448,50507699,50506572,50506272 Gene ID= ENSG00000161677.11 TPM= 27.62 Transcript Type= protein_coding chr19 50506002 50511220 50506002 50511220 - ENST00000595669.5@JOSD2 ENST00000595669.5 protein_coding 50511117,50510286,50506378,50506002 50511220,50510448,50506572,50506272 Gene ID= ENSG00000161677.11 TPM= 1.81 Transcript Type= protein_coding chr19 50505998 50511162 50505998 50511162 - ENST00000601423.5@JOSD2 ENST00000601423.5 protein_coding 50511117,50510286,50507574,50506378,50505998 50511162,50510445,50507699,50506572,50506272 Gene ID= ENSG00000161677.11 TPM= 3.17 Transcript Type= protein_coding chr19 50723312 50725722 50723312 50725722 + transcript5840.chr19.nic@CLEC11A transcript5840.chr19.nic protein_coding 50723312,50724410,50725022 50724091,50724601,50725722 Gene ID= ENSG00000105472.12 TPM= 5.43 Transcript Type= NA chr19 50723329 50725717 50723329 50725717 + ENST00000250340.8@CLEC11A ENST00000250340.8 protein_coding 50723329,50723905,50724410,50725022 50723672,50724091,50724601,50725717 Gene ID= ENSG00000105472.12 TPM= 54.33 Transcript Type= protein_coding chr19 50797690 50804595 50797690 50804595 - transcript5843.chr19.nic@C19orf48 transcript5843.chr19.nic protein_coding 50804572,50802217,50799294,50797690 50804595,50802257,50799357,50798924 Gene ID= ENSG00000167747.14 TPM= 9.06 Transcript Type= NA chr19 50797704 50804929 50797704 50804929 - ENST00000641834.1@C19orf48 ENST00000641834.1 protein_coding 50804572,50802217,50799294,50797704 50804929,50802257,50799357,50798958 Gene ID= ENSG00000167747.14 TPM= 75.16 Transcript Type= processed_transcript chr19 50797692 50804594 50797692 50804594 - transcript5847.chr19.nic@C19orf48 transcript5847.chr19.nic protein_coding 50804572,50802217,50797692 50804594,50802257,50799357 Gene ID= ENSG00000167747.14 TPM= 6.34 Transcript Type= NA chr19 51097606 51108370 51097606 51108370 - ENST00000421832.2@CTU1 ENST00000421832.2 protein_coding 51108347,51104062,51097606 51108370,51104590,51099139 Gene ID= ENSG00000142544.6 TPM= 43.47 Transcript Type= protein_coding chr19 51124908 51130310 51124908 51130310 + ENST00000250360.7@SIGLEC9 ENST00000250360.7 protein_coding 51124908,51125597,51126081,51127030,51127949,51128414,51129891 51125395,51125875,51126128,51127296,51128039,51128510,51130310 Gene ID= ENSG00000129450.8 TPM= 9.06 Transcript Type= protein_coding chr19 51142301 51153526 51142301 51153526 + ENST00000317643.10@SIGLEC7 ENST00000317643.10 protein_coding 51142301,51144406,51144912,51145855,51146754,51147221,51153063 51142802,51144684,51144959,51146121,51146850,51147317,51153526 Gene ID= ENSG00000168995.13 TPM= 4.53 Transcript Type= protein_coding chr19 51225098 51240016 51225098 51240016 + ENST00000262262.4@CD33 ENST00000262262.4 protein_coding 51225098,51225218,51225803,51226309,51235157,51235595,51239518 51225155,51225598,51226081,51226356,51235253,51235676,51240016 Gene ID= ENSG00000105383.14 TPM= 2.72 Transcript Type= protein_coding chr19 51331539 51340190 51331539 51340190 - transcript5865.chr19.nic@VSIG10L transcript5865.chr19.nic protein_coding 51340015,51338888,51337930,51337238,51334191,51333791,51331539 51340190,51339142,51338208,51337534,51334304,51333945,51332640 Gene ID= ENSG00000186806.5 TPM= 4.53 Transcript Type= NA chr19 51331539 51339770 51331539 51339770 - transcript5866.chr19.nic@VSIG10L transcript5866.chr19.nic protein_coding 51338888,51337930,51337238,51334191,51333791,51331539 51339770,51338208,51337534,51334304,51333945,51332640 Gene ID= ENSG00000186806.5 TPM= 2.72 Transcript Type= NA chr19 51331536 51339755 51331536 51339755 - ENST00000600663.1@VSIG10L ENST00000600663.1 protein_coding 51339664,51338888,51337930,51337238,51334191,51333791,51331536 51339755,51339142,51338208,51337534,51334304,51333945,51332640 Gene ID= ENSG00000186806.5 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr19 51345171 51366418 51345171 51366418 - ENST00000309244.8@ETFB ENST00000309244.8 protein_coding 51366270,51354150,51353132,51350329,51346900,51345171 51366418,51354308,51353290,51350391,51347058,51345381 Gene ID= ENSG00000105379.9 TPM= 407.5 Transcript Type= protein_coding chr19 51367098 51368092 51367098 51368092 - transcript5873.chr19.nic@CLDND2 transcript5873.chr19.nic protein_coding 51367886,51367457,51367098 51368092,51367576,51367215 Gene ID= ENSG00000160318.6 TPM= 9.06 Transcript Type= NA chr19 51371612 51372715 51371612 51372715 - ENST00000221978.9@NKG7 ENST00000221978.9 protein_coding 51372379,51372161,51371940,51371612 51372715,51372307,51372074,51371835 Gene ID= ENSG00000105374.9 TPM= 1.81 Transcript Type= protein_coding chr19 51410021 51417803 51410021 51417803 - ENST00000353836.9@SIGLEC10 ENST00000353836.9 protein_coding 51417545,51417082,51416666,51416310,51415898,51415568,51415181,51414422,51413712,51410021 51417803,51417465,51416950,51416357,51416167,51415615,51415438,51414515,51413823,51411371 Gene ID= ENSG00000142512.14 TPM= 3.17 Transcript Type= protein_coding chr19 51410022 51417581 51410022 51417581 - ENST00000442846.7@SIGLEC10 ENST00000442846.7 protein_coding 51417545,51417082,51416666,51416310,51415568,51415181,51414422,51413712,51410022 51417581,51417465,51416776,51416357,51415615,51415438,51414515,51413823,51411371 Gene ID= ENSG00000142512.14 TPM= 1.36 Transcript Type= protein_coding chr19 51450997 51469361 51450997 51469361 - transcript5886.chr19.nnic@SIGLEC8 transcript5886.chr19.nnic protein_coding 51469295,51459315,51458792,51457934,51457461,51457184,51455418,51454684,51454219,51450997 51469361,51459492,51458946,51458228,51457739,51457231,51455687,51454780,51454315,51452633 Gene ID= ENSG00000105366.15 TPM= 2.72 Transcript Type= NA chr19 51450997 51458454 51450997 51458454 - ENST00000321424.7@SIGLEC8 ENST00000321424.7 protein_coding 51457934,51457461,51457184,51455418,51454684,51454219,51450997 51458454,51457739,51457231,51455687,51454780,51454315,51452633 Gene ID= ENSG00000105366.15 TPM= 5.43 Transcript Type= protein_coding chr19 51594561 51601788 51594561 51601788 + ENST00000598755.1@AC018755.3 ENST00000598755.1 transcribed_processed_pseudogene 51594561,51601211 51594646,51601788 Gene ID= ENSG00000269388.1 TPM= 19.92 Transcript Type= processed_transcript chr19 51610966 51630438 51610966 51630438 - transcript5895.chr19.nic@SIGLEC5 transcript5895.chr19.nic protein_coding 51630299,51629833,51629358,51629038,51627834,51627462,51627149,51626032,51610966 51630438,51630216,51629636,51629076,51628091,51627746,51627248,51626113,51612422 Gene ID= ENSG00000105501.12 TPM= 3.62 Transcript Type= NA chr19 51642553 51646801 51642553 51646801 - ENST00000360844.6@SIGLEC14 ENST00000360844.6 protein_coding 51646723,51646257,51645782,51645477,51643779,51643537,51642553 51646801,51646640,51646060,51645530,51644036,51643672,51643397 Gene ID= ENSG00000254415.3 TPM= 3.62 Transcript Type= protein_coding chr19 51689282 51705189 51689282 51705189 + transcript5899.chr19.nnic@SPACA6 transcript5899.chr19.nnic protein_coding 51689282,51694478,51701658,51702629,51703021,51703228,51704030,51704270,51705090 51689582,51694555,51701726,51702652,51703098,51703335,51704186,51704480,51705189 Gene ID= ENSG00000182310.13 TPM= 2.26 Transcript Type= NA chr19 51691293 51705189 51691293 51705189 + transcript5901.chr19.nnic@SPACA6 transcript5901.chr19.nnic protein_coding 51691293,51694478,51701658,51702629,51703021,51703228,51704030,51704270,51705090 51691329,51694555,51701726,51702652,51703098,51703337,51704186,51704480,51705189 Gene ID= ENSG00000182310.13 TPM= 2.26 Transcript Type= NA chr19 51693344 51705190 51693344 51705190 + ENST00000573266.5@SPACA6 ENST00000573266.5 protein_coding 51693344,51701658,51702629,51703021,51703228,51704030,51704270,51705090 51694555,51701726,51702652,51703098,51703335,51704186,51704480,51705190 Gene ID= ENSG00000182310.13 TPM= 1.36 Transcript Type= retained_intron chr19 51703999 51705190 51703999 51705190 + ENST00000576975.1@SPACA6 ENST00000576975.1 protein_coding 51703999,51704270,51705090 51704186,51704480,51705190 Gene ID= ENSG00000182310.13 TPM= 3.17 Transcript Type= retained_intron chr19 51745172 51751893 51745172 51751893 - ENST00000595042.5@FPR1 ENST00000595042.5 protein_coding 51751814,51750203,51745172 51751893,51750253,51747005 Gene ID= ENSG00000171051.8 TPM= 1.36 Transcript Type= protein_coding chr19 51745172 51751909 51745172 51751909 - ENST00000304748.4@FPR1 ENST00000304748.4 protein_coding 51751814,51745172 51751909,51747005 Gene ID= ENSG00000171051.8 TPM= 11.32 Transcript Type= protein_coding chr19 51795163 51826189 51795163 51826189 + ENST00000339223.4@FPR3 ENST00000339223.4 protein_coding 51795163,51823739 51795331,51826189 Gene ID= ENSG00000187474.4 TPM= 3.62 Transcript Type= protein_coding chr19 51855810 51887951 51855810 51887951 - ENST00000640955.1@ZNF577 ENST00000640955.1 protein_coding 51886821,51880679,51880323,51878389,51877282,51860904,51855810 51887951,51880877,51880401,51878515,51877377,51860978,51855967 Gene ID= ENSG00000161551.14 TPM= 3.17 Transcript Type= processed_transcript chr19 51872550 51887920 51872550 51887920 - ENST00000638348.1@ZNF577 ENST00000638348.1 protein_coding 51886821,51880679,51880323,51878389,51877282,51872550 51887920,51880877,51880401,51878515,51877377,51873706 Gene ID= ENSG00000161551.14 TPM= 1.36 Transcript Type= protein_coding chr19 51889224 51905011 51889224 51905011 - ENST00000354957.7@ZNF649 ENST00000354957.7 protein_coding 51904914,51900093,51896852,51896472,51889224 51905011,51900294,51896978,51896567,51891897 Gene ID= ENSG00000198093.10 TPM= 9.06 Transcript Type= protein_coding chr19 51927465 51946623 51927465 51946623 + transcript5926.chr19.nic@ZNF613 transcript5926.chr19.nic protein_coding 51927465,51929732,51936028,51940209,51940617,51944119 51927540,51929824,51936235,51940335,51940709,51946623 Gene ID= ENSG00000176024.17 TPM= 1.81 Transcript Type= NA chr19 51927220 51946623 51927220 51946623 + ENST00000293471.10@ZNF613 ENST00000293471.10 protein_coding 51927220,51929732,51936028,51940209,51940617,51944119 51927540,51929896,51936235,51940335,51940709,51946623 Gene ID= ENSG00000176024.17 TPM= 1.81 Transcript Type= protein_coding chr19 51964343 51986826 51964343 51986826 - ENST00000243644.8@ZNF350 ENST00000243644.8 protein_coding 51986770,51974346,51969005,51968578,51964343 51986826,51974531,51969131,51968673,51966214 Gene ID= ENSG00000256683.6 TPM= 11.77 Transcript Type= protein_coding chr19 51991334 52008215 51991334 52008215 - transcript5942.chr19.nic@ZNF615 transcript5942.chr19.nic protein_coding 52008141,52002155,52001813,52000346,51991334 52008215,52002281,52001908,52000378,51994837 Gene ID= ENSG00000197619.13 TPM= 1.81 Transcript Type= NA chr19 52013325 52028570 52013325 52028570 - ENST00000270649.10@ZNF614 ENST00000270649.10 protein_coding 52028242,52025731,52018368,52018008,52013325 52028570,52025961,52018494,52018103,52017359 Gene ID= ENSG00000142556.18 TPM= 7.24 Transcript Type= protein_coding chr19 52064466 52095783 52064466 52095783 - transcript5950.chr19.nic@ZNF841 transcript5950.chr19.nic protein_coding 52095575,52093846,52088937,52084787,52076958,52076044,52064466 52095783,52093971,52089002,52084878,52077084,52076172,52067610 Gene ID= ENSG00000197608.11 TPM= 2.72 Transcript Type= NA chr19 52153865 52171664 52153865 52171664 - transcript5976.chr19.nnic@ZNF836 transcript5976.chr19.nnic protein_coding 52171336,52169648,52168058,52160465,52154622,52153865 52171664,52169781,52168152,52160591,52157540,52154125 Gene ID= ENSG00000196267.12 TPM= 5.43 Transcript Type= NA chr19 52153865 52171664 52153865 52171664 - transcript5977.chr19.nic@ZNF836 transcript5977.chr19.nic protein_coding 52171336,52169648,52168058,52160465,52153865 52171664,52169781,52168152,52160591,52157540 Gene ID= ENSG00000196267.12 TPM= 2.72 Transcript Type= NA chr19 52160321 52171643 52160321 52171643 - ENST00000597065.1@ZNF836 ENST00000597065.1 protein_coding 52171336,52169648,52168058,52160321 52171643,52169781,52168152,52160591 Gene ID= ENSG00000196267.12 TPM= 6.34 Transcript Type= protein_coding chr19 52297167 52325926 52297167 52325926 + transcript5988.chr19.nnic@ZNF480 transcript5988.chr19.nnic protein_coding 52297167,52299718,52314153,52315834,52321579 52297223,52300484,52314279,52315962,52325926 Gene ID= ENSG00000198464.13 TPM= 2.26 Transcript Type= NA chr19 52297177 52325922 52297177 52325922 + ENST00000595962.5@ZNF480 ENST00000595962.5 protein_coding 52297177,52300394,52314153,52315834,52321579 52297223,52300484,52314279,52315962,52325922 Gene ID= ENSG00000198464.13 TPM= 4.07 Transcript Type= protein_coding chr19 52336308 52367113 52336308 52367113 + ENST00000403906.7@ZNF610 ENST00000403906.7 protein_coding 52336308,52347707,52349154,52353682,52354251,52365698 52336506,52347944,52349235,52353808,52354379,52367113 Gene ID= ENSG00000167554.14 TPM= 2.72 Transcript Type= protein_coding chr19 52369923 52374716 52369923 52374716 + transcript6003.chr19.nnic@ZNF880 transcript6003.chr19.nnic protein_coding 52369923,52373111,52374299,52374504 52369977,52373237,52374427,52374716 Gene ID= ENSG00000221923.8 TPM= 1.81 Transcript Type= NA chr19 52369939 52374717 52369939 52374717 + ENST00000344085.9@ZNF880 ENST00000344085.9 protein_coding 52369939,52373111,52374299,52374484 52369977,52373237,52374394,52374717 Gene ID= ENSG00000221923.8 TPM= 3.62 Transcript Type= protein_coding chr19 52397851 52418404 52397851 52418404 + transcript5994.chr19.nic@ZNF528 transcript5994.chr19.nic protein_coding 52397851,52398367,52401685,52401947,52402429,52405907,52406515,52415124 52397904,52398619,52401753,52402028,52402545,52406033,52406643,52418404 Gene ID= ENSG00000167555.13 TPM= 1.81 Transcript Type= NA chr19 52397851 52418402 52397851 52418402 + transcript5995.chr19.nic@ZNF528 transcript5995.chr19.nic protein_coding 52397851,52398367,52401685,52401947,52405907,52406515,52414204,52415124 52397904,52398619,52401753,52402028,52406033,52406643,52414368,52418402 Gene ID= ENSG00000167555.13 TPM= 1.81 Transcript Type= NA chr19 52397851 52409161 52397851 52409161 + transcript5997.chr19.nic@ZNF528 transcript5997.chr19.nic protein_coding 52397851,52398367,52401685,52401947,52405907,52406515,52408226 52397904,52398619,52401753,52402028,52406033,52406643,52409161 Gene ID= ENSG00000167555.13 TPM= 1.81 Transcript Type= NA chr19 52397868 52418404 52397868 52418404 + ENST00000360465.7@ZNF528 ENST00000360465.7 protein_coding 52397868,52398367,52401685,52401947,52405907,52406515,52415124 52397904,52398619,52401753,52402028,52406033,52406643,52418404 Gene ID= ENSG00000167555.13 TPM= 5.43 Transcript Type= protein_coding chr19 52570275 52584566 52570275 52584566 + ENST00000391785.7@ZNF701 ENST00000391785.7 protein_coding 52570275,52574077,52575895,52582202 52570330,52574162,52576021,52584566 Gene ID= ENSG00000167562.12 TPM= 2.72 Transcript Type= protein_coding chr19 52592802 52690494 52592802 52690494 - transcript6031.chr19.nnic@ZNF83 transcript6031.chr19.nnic protein_coding 52690443,52660762,52655561,52592802 52690494,52660843,52655687,52594304 Gene ID= ENSG00000167766.18 TPM= 1.81 Transcript Type= NA chr19 52612367 52638391 52612367 52638391 - ENST00000536937.5@ZNF83 ENST00000536937.5 protein_coding 52638312,52635066,52618936,52612367 52638391,52635153,52619062,52614797 Gene ID= ENSG00000167766.18 TPM= 5.43 Transcript Type= protein_coding chr19 52612378 52690488 52612378 52690488 - ENST00000594682.6@ZNF83 ENST00000594682.6 protein_coding 52690443,52660762,52655561,52635066,52618936,52612378 52690488,52660843,52655687,52635153,52619062,52614797 Gene ID= ENSG00000167766.18 TPM= 2.72 Transcript Type= protein_coding chr19 52703612 52735052 52703612 52735052 - transcript6036.chr19.nic@ZNF611 transcript6036.chr19.nic protein_coding 52735001,52715832,52714015,52703612 52735052,52715913,52714141,52707538 Gene ID= ENSG00000213020.9 TPM= 1.81 Transcript Type= NA chr19 52764218 52786763 52764218 52786763 - transcript6046.chr19.nnic@ZNF600 transcript6046.chr19.nnic protein_coding 52786595,52778826,52774575,52764218 52786763,52778907,52774701,52767772 Gene ID= ENSG00000189190.9 TPM= 1.81 Transcript Type= NA chr19 52796898 52821654 52796898 52821654 - transcript6042.chr19.nic@ZNF28 transcript6042.chr19.nic protein_coding 52821586,52817944,52808007,52805145,52796898 52821654,52818031,52808133,52805262,52801702 Gene ID= ENSG00000198538.10 TPM= 4.53 Transcript Type= NA chr19 52797409 52821632 52797409 52821632 - ENST00000457749.6@ZNF28 ENST00000457749.6 protein_coding 52821586,52817944,52808007,52797409 52821632,52818031,52808133,52801702 Gene ID= ENSG00000198538.10 TPM= 1.81 Transcript Type= protein_coding chr19 52838536 52857649 52838536 52857649 - ENST00000243639.8@ZNF468 ENST00000243639.8 protein_coding 52857572,52854258,52849087,52845179,52838536 52857649,52854345,52849213,52845296,52842151 Gene ID= ENSG00000204604.9 TPM= 5.43 Transcript Type= protein_coding chr19 52838533 52857621 52838533 52857621 - transcript6044.chr19.nic@ZNF468 transcript6044.chr19.nic protein_coding 52857572,52854258,52853872,52849087,52838533 52857621,52854345,52854107,52849213,52842151 Gene ID= ENSG00000204604.9 TPM= 1.81 Transcript Type= NA chr19 52838008 52857619 52838008 52857619 - ENST00000595646.5@ZNF468 ENST00000595646.5 protein_coding 52857572,52854258,52849087,52838008 52857619,52854345,52849213,52842151 Gene ID= ENSG00000204604.9 TPM= 8.15 Transcript Type= protein_coding chr19 52904417 52923470 52904417 52923470 - transcript6055.chr19.nic@ZNF888 transcript6055.chr19.nic protein_coding 52923369,52917859,52915196,52904417 52923470,52917997,52915322,52908179 Gene ID= ENSG00000213793.5 TPM= 2.72 Transcript Type= NA chr19 52949373 52962860 52949373 52962860 - transcript6057.chr19.nnic@ZNF816 transcript6057.chr19.nnic protein_coding 52962717,52960027,52956027,52952751,52949373 52962860,52960177,52956104,52952877,52951891 Gene ID= ENSG00000180257.13 TPM= 1.81 Transcript Type= NA chr19 52949373 52962878 52949373 52962878 - transcript6059.chr19.nic@ZNF816 transcript6059.chr19.nic protein_coding 52962717,52956027,52952751,52949373 52962878,52956104,52952877,52951891 Gene ID= ENSG00000180257.13 TPM= 1.81 Transcript Type= NA chr19 52949442 52962882 52949442 52962882 - ENST00000444460.6@ZNF816 ENST00000444460.6 protein_coding 52962727,52956027,52952751,52949442 52962882,52956104,52952877,52951584 Gene ID= ENSG00000180257.13 TPM= 4.53 Transcript Type= protein_coding chr19 52968251 53037884 52968251 53037884 - transcript6067.chr19.nnic@ZNF702P transcript6067.chr19.nnic transcribed_processed_pseudogene 53037725,53003355,52986575,52980892,52968251 53037884,53003490,52986846,52980972,52970842 Gene ID= ENSG00000242779.6 TPM= 1.81 Transcript Type= NA chr19 52967603 53042566 52967603 53042566 - transcript6070.chr19.nnic@ZNF702P transcript6070.chr19.nnic transcribed_processed_pseudogene 53042427,52986575,52980892,52967603 53042566,52986846,52980972,52970842 Gene ID= ENSG00000242779.6 TPM= 1.81 Transcript Type= NA chr19 52968251 52993524 52968251 52993524 - ENST00000270443.8@ZNF702P ENST00000270443.8 transcribed_processed_pseudogene 52993480,52986575,52980892,52968251 52993524,52986846,52980972,52970842 Gene ID= ENSG00000242779.6 TPM= 2.72 Transcript Type= processed_transcript chr19 53065625 53103415 53065625 53103415 - transcript6080.chr19.nic@ZNF160 transcript6080.chr19.nic protein_coding 53103265,53091413,53086262,53075057,53074140,53065625 53103415,53091720,53086321,53075183,53074268,53070262 Gene ID= ENSG00000170949.17 TPM= 4.98 Transcript Type= NA chr19 53066614 53103434 53066614 53103434 - ENST00000429604.5@ZNF160 ENST00000429604.5 protein_coding 53103265,53091637,53091413,53086262,53075057,53074140,53066614 53103434,53091720,53091529,53086321,53075183,53074268,53070262 Gene ID= ENSG00000170949.17 TPM= 7.7 Transcript Type= protein_coding chr19 53107880 53132918 53107880 53132918 - ENST00000421033.5@ZNF415 ENST00000421033.5 protein_coding 53132749,53122662,53116313,53107880 53132918,53122743,53116433,53109908 Gene ID= ENSG00000170954.11 TPM= 3.62 Transcript Type= protein_coding chr19 53107879 53132875 53107879 53132875 - ENST00000601493.5@ZNF415 ENST00000601493.5 protein_coding 53132856,53122662,53107879 53132875,53122743,53109908 Gene ID= ENSG00000170954.11 TPM= 1.81 Transcript Type= protein_coding chr19 53107879 53132892 53107879 53132892 - ENST00000243643.8@ZNF415 ENST00000243643.8 protein_coding 53132856,53122662,53116313,53107879 53132892,53122743,53116433,53109908 Gene ID= ENSG00000170954.11 TPM= 2.72 Transcript Type= protein_coding chr19 53107879 53132886 53107879 53132886 - ENST00000597503.5@ZNF415 ENST00000597503.5 protein_coding 53132749,53122662,53116313,53115210,53107879 53132886,53122743,53116433,53115307,53109908 Gene ID= ENSG00000170954.11 TPM= 1.81 Transcript Type= protein_coding chr19 53138575 53159054 53138575 53159054 - transcript6092.chr19.nnic@ZNF347 transcript6092.chr19.nnic protein_coding 53158685,53153733,53149241,53148681,53138575 53159054,53153798,53149367,53148787,53142556 Gene ID= ENSG00000197937.12 TPM= 3.17 Transcript Type= NA chr19 53235383 53254843 53235383 53254843 - transcript6109.chr19.nic@ZNF677 transcript6109.chr19.nic protein_coding 53254599,53253086,53251536,53243744,53235383 53254843,53253156,53251605,53243897,53238557 Gene ID= ENSG00000197928.10 TPM= 2.72 Transcript Type= NA chr19 53395121 53430413 53395121 53430413 + transcript6121.chr19.nnic@ZNF765 transcript6121.chr19.nnic protein_coding 53395121,53397943,53402065,53423062,53425071,53425330,53426018,53426748,53427087,53428109 53395193,53398030,53402191,53423502,53425147,53425451,53426215,53426936,53427219,53430413 Gene ID= ENSG00000196417.12 TPM= 3.62 Transcript Type= NA chr19 53395150 53412007 53395150 53412007 + ENST00000396408.7@ZNF765 ENST00000396408.7 protein_coding 53395150,53397943,53402065,53407698 53395193,53398030,53402191,53412007 Gene ID= ENSG00000196417.12 TPM= 6.34 Transcript Type= protein_coding chr19 53431984 53444670 53431984 53444670 + ENST00000424846.3@TPM3P9 ENST00000424846.3 transcribed_processed_pseudogene 53431984,53441796 53432028,53444670 Gene ID= ENSG00000241015.2 TPM= 3.62 Transcript Type= processed_transcript chr19 53431984 53458252 53431984 53458252 + transcript6128.chr19.nnic@ZNF761 transcript6128.chr19.nnic protein_coding 53431984,53446227,53447196,53449512,53451774,53454650 53432028,53446337,53447283,53449638,53451864,53458252 Gene ID= ENSG00000160336.14 TPM= 2.72 Transcript Type= NA chr19 53431993 53450331 53431993 53450331 + ENST00000610928.4@ZNF761 ENST00000610928.4 protein_coding 53431993,53445001,53446227,53447196,53449512,53449879 53432028,53445123,53446337,53447283,53449638,53450331 Gene ID= ENSG00000160336.14 TPM= 1.81 Transcript Type= protein_coding chr19 53538135 53580271 53538135 53580271 + transcript6146.chr19.nic@ZNF331 transcript6146.chr19.nic protein_coding 53538135,53539216,53555845,53563763,53569304,53571604,53576697 53538296,53539282,53555908,53563792,53569385,53571730,53580271 Gene ID= ENSG00000130844.16 TPM= 6.34 Transcript Type= NA chr19 53867883 53876437 53867883 53876437 + ENST00000391770.8@MYADM ENST00000391770.8 protein_coding 53867883,53869754,53873528 53867943,53869838,53876437 Gene ID= ENSG00000179820.15 TPM= 55.24 Transcript Type= protein_coding chr19 54094670 54102692 54094670 54102692 - ENST00000284648.10@OSCAR ENST00000284648.10 protein_coding 54102654,54100756,54099748,54096862,54094670 54102692,54100951,54099780,54097164,54096153 Gene ID= ENSG00000170909.13 TPM= 1.2 Transcript Type= protein_coding chr19 54094670 54102686 54094670 54102686 - ENST00000616215.4@OSCAR ENST00000616215.4 protein_coding 54102654,54100756,54096862,54094670 54102686,54100951,54097164,54096153 Gene ID= ENSG00000170909.13 TPM= 1.2 Transcript Type= protein_coding chr19 54094670 54100838 54094670 54100838 - ENST00000358375.8@OSCAR ENST00000358375.8 protein_coding 54100756,54099748,54096862,54095872,54094670 54100838,54099780,54097164,54096153,54095357 Gene ID= ENSG00000170909.13 TPM= 1.2 Transcript Type= protein_coding chr19 54102855 54106961 54102855 54106961 + ENST00000451517.5@NDUFA3 ENST00000451517.5 protein_coding 54102855,54103114,54105597,54105934,54106811 54102888,54103188,54105703,54106011,54106961 Gene ID= ENSG00000170906.15 TPM= 3.02 Transcript Type= nonsense_mediated_decay chr19 54102852 54106961 54102852 54106961 + ENST00000391762.5@NDUFA3 ENST00000391762.5 protein_coding 54102852,54103114,54105934,54106353,54106811 54102888,54103188,54106011,54106446,54106961 Gene ID= ENSG00000170906.15 TPM= 4.83 Transcript Type= protein_coding chr19 54102869 54106965 54102869 54106965 + ENST00000391763.3@NDUFA3 ENST00000391763.3 protein_coding 54102869,54103114,54105934,54106811 54102898,54103188,54106011,54106965 Gene ID= ENSG00000170906.15 TPM= 19.32 Transcript Type= protein_coding chr19 54107013 54115675 54107013 54115675 - ENST00000391759.5@TFPT ENST00000391759.5 protein_coding 54115247,54114442,54110051,54108326,54108026,54107013 54115675,54114700,54110121,54108395,54108244,54107169 Gene ID= ENSG00000105619.13 TPM= 19.92 Transcript Type= protein_coding chr19 54115457 54131709 54115457 54131709 + ENST00000321030.8@PRPF31 ENST00000321030.8 protein_coding 54115457,54118271,54118573,54121860,54122497,54123454,54123749,54124499,54126528,54128073,54128305,54129057,54129272,54131307 54115797,54118455,54118633,54121943,54122594,54123560,54123918,54124656,54126617,54128200,54128377,54129185,54129370,54131709 Gene ID= ENSG00000105618.13 TPM= 120.14 Transcript Type= protein_coding chr19 54137717 54155707 54137717 54155707 + transcript6192.chr19.nic@CNOT3 transcript6192.chr19.nic protein_coding 54137717,54142929,54143119,54143442,54143660,54144006,54144237,54145595,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715,54155309 54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54153840,54155707 Gene ID= ENSG00000088038.17 TPM= 15.12 Transcript Type= NA chr19 54137717 54154509 54137717 54154509 + transcript6193.chr19.nic@CNOT3 transcript6193.chr19.nic protein_coding 54137717,54142929,54143119,54143442,54143660,54144006,54144237,54145598,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715,54153944 54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54153840,54154509 Gene ID= ENSG00000088038.17 TPM= 1.99 Transcript Type= NA chr19 54137717 54155650 54137717 54155650 + transcript6197.chr19.nic@CNOT3 transcript6197.chr19.nic protein_coding 54137717,54142929,54143119,54143442,54143660,54144006,54144237,54145595,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715 54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54155650 Gene ID= ENSG00000088038.17 TPM= 2.44 Transcript Type= NA chr19 54137728 54155681 54137728 54155681 + ENST00000221232.9@CNOT3 ENST00000221232.9 protein_coding 54137728,54142929,54143119,54143442,54143660,54144006,54144237,54145598,54145910,54146601,54148148,54148620,54149560,54152226,54152428,54152867,54153715,54155309 54137993,54143003,54143186,54143516,54143749,54144134,54144332,54145817,54146043,54146657,54148535,54148743,54149758,54152325,54152626,54152999,54153840,54155681 Gene ID= ENSG00000088038.17 TPM= 38.67 Transcript Type= protein_coding chr19 54160098 54164700 54160098 54164700 - transcript6205.chr19.nic@TMC4 transcript6205.chr19.nic protein_coding 54164434,54163724,54163033,54162102,54161130,54160878,54160467,54160098 54164700,54163887,54163159,54162770,54161260,54161033,54160545,54160374 Gene ID= ENSG00000167608.11 TPM= 2.72 Transcript Type= NA chr19 54173415 54189359 54173415 54189359 - transcript6228.chr19.nic@MBOAT7 transcript6228.chr19.nic protein_coding 54189302,54188433,54188217,54187161,54183521,54180773,54178765,54173415 54189359,54188511,54188346,54187287,54183680,54181133,54178941,54174431 Gene ID= ENSG00000125505.16 TPM= 50.95 Transcript Type= NA chr19 54173413 54189882 54173413 54189882 - ENST00000431666.6@MBOAT7 ENST00000431666.6 protein_coding 54189338,54188433,54188217,54183521,54180773,54178765,54173413 54189882,54188511,54188346,54183680,54181133,54178941,54174431 Gene ID= ENSG00000125505.16 TPM= 30.57 Transcript Type= protein_coding chr19 54173415 54189844 54173415 54189844 - transcript6245.chr19.nic@MBOAT7 transcript6245.chr19.nic protein_coding 54189338,54188433,54188217,54187161,54183521,54178765,54173415 54189844,54188511,54188346,54187287,54183680,54181133,54174431 Gene ID= ENSG00000125505.16 TPM= 121.12 Transcript Type= NA chr19 54173415 54189815 54173415 54189815 - ENST00000245615.5@MBOAT7 ENST00000245615.5 protein_coding 54189338,54188433,54188217,54187161,54183521,54180773,54178765,54173415 54189815,54188511,54188346,54187287,54183680,54181133,54178941,54174431 Gene ID= ENSG00000125505.16 TPM= 1670.06 Transcript Type= protein_coding chr19 54173419 54180790 54173419 54180790 - ENST00000494142.1@MBOAT7 ENST00000494142.1 protein_coding 54178765,54173419 54180790,54174431 Gene ID= ENSG00000125505.16 TPM= 71.98 Transcript Type= retained_intron chr19 54173415 54189568 54173415 54189568 - ENST00000338624.10@MBOAT7 ENST00000338624.10 protein_coding 54189338,54188217,54183521,54180773,54178765,54173415 54189568,54188346,54183680,54181133,54178941,54174431 Gene ID= ENSG00000125505.16 TPM= 14.27 Transcript Type= protein_coding chr19 54190268 54194536 54190268 54194536 + ENST00000302937.8@TSEN34 ENST00000302937.8 protein_coding 54190268,54191361,54191721,54192116,54193175 54190450,54191607,54191964,54192373,54194536 Gene ID= ENSG00000170892.10 TPM= 50.26 Transcript Type= protein_coding chr19 54191253 54193666 54191253 54193666 + ENST00000396388.2@TSEN34 ENST00000396388.2 protein_coding 54191253,54191721,54192116,54193175 54191607,54191964,54192373,54193666 Gene ID= ENSG00000170892.10 TPM= 213.26 Transcript Type= protein_coding chr19 54200874 54207647 54200874 54207647 + ENST00000391751.7@RPS9 ENST00000391751.7 protein_coding 54200874,54201160,54201487,54207398 54200888,54201281,54201609,54207647 Gene ID= ENSG00000170889.13 TPM= 6.79 Transcript Type= protein_coding chr19 54201133 54207647 54201133 54207647 + ENST00000391753.6@RPS9 ENST00000391753.6 protein_coding 54201133,54201487,54206276,54207398 54201281,54201609,54206462,54207647 Gene ID= ENSG00000170889.13 TPM= 156.21 Transcript Type= protein_coding chr19 54216327 54242862 54216327 54242862 - transcript6274.chr19.nnic@LILRB3 transcript6274.chr19.nnic protein_coding 54242718,54242519,54242026,54241576,54240831,54240348,54220528,54220155,54219129,54218763,54218645,54218361,54217319,54216327 54242862,54242554,54242310,54241878,54241127,54240576,54220601,54220205,54219245,54218838,54218682,54218413,54217474,54217239 Gene ID= ENSG00000204577.11 TPM= 6.79 Transcript Type= NA chr19 54236593 54242862 54236593 54242862 - transcript6280.chr19.nic@LILRA6 transcript6280.chr19.nic protein_coding 54242718,54242519,54242026,54241576,54240831,54240274,54239901,54238486,54236593 54242862,54242554,54242310,54241878,54241127,54240576,54239951,54239089,54237193 Gene ID= ENSG00000244482.10 TPM= 3.17 Transcript Type= NA chr19 54249423 54257530 54249423 54257530 - transcript6290.chr19.nnic@LILRB5 transcript6290.chr19.nnic protein_coding 54257477,54257160,54256961,54256489,54256043,54255286,54254735,54254365,54254018,54252871,54252486,54252366,54252054,54249423 54257530,54257244,54256996,54256773,54256342,54255582,54255037,54254415,54254065,54252987,54252549,54252403,54252106,54250932 Gene ID= ENSG00000105609.16 TPM= 1.81 Transcript Type= NA chr19 54249422 54257298 54249422 54257298 - transcript6293.chr19.nic@LILRB5 transcript6293.chr19.nic protein_coding 54257160,54256961,54256489,54256043,54255286,54254735,54254365,54254018,54252871,54252486,54252366,54252054,54249422 54257298,54256996,54256773,54256342,54255582,54255037,54254415,54254068,54252987,54252549,54252403,54252106,54251169 Gene ID= ENSG00000105609.16 TPM= 9.06 Transcript Type= NA chr19 54249422 54257271 54249422 54257271 - transcript6297.chr19.nic@LILRB5 transcript6297.chr19.nic protein_coding 54257160,54256961,54256489,54255286,54254735,54254365,54254018,54252871,54252486,54252366,54252054,54249422 54257271,54256996,54256773,54255582,54255037,54254415,54254068,54252987,54252549,54252403,54252106,54251169 Gene ID= ENSG00000105609.16 TPM= 3.62 Transcript Type= NA chr19 54249422 54257273 54249422 54257273 - transcript6298.chr19.nnic@LILRB5 transcript6298.chr19.nnic protein_coding 54257160,54256961,54256489,54256043,54255286,54254735,54254365,54252871,54252486,54252366,54252054,54249422 54257273,54256996,54256773,54256342,54255582,54255037,54254415,54252987,54252549,54252403,54252106,54251169 Gene ID= ENSG00000105609.16 TPM= 1.81 Transcript Type= NA chr19 54249423 54257261 54249423 54257261 - transcript6300.chr19.nnic@LILRB5 transcript6300.chr19.nnic protein_coding 54257160,54256961,54256489,54256043,54255286,54254735,54254365,54252871,54252486,54252366,54252054,54249423 54257261,54256996,54256773,54256342,54255582,54255037,54254415,54252987,54252549,54252403,54252106,54250932 Gene ID= ENSG00000105609.16 TPM= 2.72 Transcript Type= NA chr19 54249431 54257301 54249431 54257301 - ENST00000316219.9@LILRB5 ENST00000316219.9 protein_coding 54257160,54256961,54256489,54256043,54255286,54254735,54254365,54254018,54252871,54252486,54252366,54252054,54249431 54257301,54256996,54256773,54256342,54255582,54255037,54254415,54254065,54252987,54252549,54252403,54252106,54250932 Gene ID= ENSG00000105609.16 TPM= 12.68 Transcript Type= protein_coding chr19 54273813 54280644 54273813 54280644 - transcript6309.chr19.nic@LILRB2 transcript6309.chr19.nic protein_coding 54280463,54280264,54279791,54279345,54278812,54278260,54277889,54277550,54276807,54276381,54276264,54275951,54273813 54280644,54280299,54280075,54279647,54279108,54278562,54277939,54277600,54276929,54276456,54276301,54276003,54274829 Gene ID= ENSG00000131042.14 TPM= 3.92 Transcript Type= NA chr19 54274466 54281097 54274466 54281097 - ENST00000493242.1@LILRB2 ENST00000493242.1 protein_coding 54280961,54280463,54280264,54279791,54279345,54278812,54278260,54277889,54276807,54276381,54276264,54275951,54274466 54281097,54280544,54280299,54280075,54279647,54279108,54278562,54277939,54277600,54276456,54276301,54276003,54274829 Gene ID= ENSG00000131042.14 TPM= 1.2 Transcript Type= retained_intron chr19 54274466 54281184 54274466 54281184 - ENST00000391749.4@LILRB2 ENST00000391749.4 protein_coding 54280961,54280463,54280264,54279791,54279345,54278812,54278260,54277889,54277550,54276807,54276381,54276264,54275951,54274466 54281184,54280544,54280299,54280075,54279647,54279108,54278562,54277939,54277600,54276929,54276456,54276301,54276003,54274829 Gene ID= ENSG00000131042.14 TPM= 3.02 Transcript Type= protein_coding chr19 54353623 54365091 54353623 54365091 - transcript6313.chr19.nic@LAIR1 transcript6313.chr19.nic protein_coding 54365030,54364295,54360916,54360022,54356928,54356491,54356356,54356230,54355954,54353623 54365091,54364330,54361209,54360072,54356966,54356619,54356398,54356267,54356006,54355414 Gene ID= ENSG00000167613.15 TPM= 3.32 Transcript Type= NA chr19 54353623 54365091 54353623 54365091 - transcript6315.chr19.nic@LAIR1 transcript6315.chr19.nic protein_coding 54365030,54364295,54361010,54360022,54356928,54356491,54356356,54356230,54355954,54353623 54365091,54364330,54361209,54360072,54356966,54356619,54356398,54356267,54356006,54355414 Gene ID= ENSG00000167613.15 TPM= 3.32 Transcript Type= NA chr19 54353623 54364936 54353623 54364936 - transcript6316.chr19.nic@LAIR1 transcript6316.chr19.nic protein_coding 54364771,54364295,54361010,54360022,54356928,54356491,54356356,54356230,54355954,54353623 54364936,54364486,54361209,54360072,54356966,54356619,54356398,54356267,54356006,54355414 Gene ID= ENSG00000167613.15 TPM= 3.32 Transcript Type= NA chr19 54354675 54364995 54354675 54364995 - ENST00000434277.6@LAIR1 ENST00000434277.6 protein_coding 54364771,54364295,54360916,54360022,54356928,54356491,54356356,54356230,54355954,54354675 54364995,54364330,54361206,54360072,54356966,54356619,54356398,54356267,54356006,54355414 Gene ID= ENSG00000167613.15 TPM= 1.81 Transcript Type= protein_coding chr19 54448887 54462037 54448887 54462037 + ENST00000326764.9@LENG8 ENST00000326764.9 protein_coding 54448887,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314,54460766 54449310,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54458521,54462037 Gene ID= ENSG00000167615.16 TPM= 49.51 Transcript Type= protein_coding chr19 54449168 54462049 54449168 54462049 + transcript6327.chr19.nic@LENG8 transcript6327.chr19.nic protein_coding 54449168,54451290,54452093,54452651,54453546,54454430,54454951,54455364,54455967,54456325,54456636,54457747,54457934,54458103,54458314 54449306,54451382,54452267,54452752,54453656,54454682,54455092,54455567,54456245,54456465,54456921,54457848,54458002,54458232,54462049 Gene ID= ENSG00000167615.16 TPM= 11.93 Transcript Type= NA chr19 54465026 54473264 54465026 54473264 - ENST00000301200.2@CDC42EP5 ENST00000301200.2 protein_coding 54473064,54471545,54465026 54473264,54471685,54465547 Gene ID= ENSG00000167617.2 TPM= 14.49 Transcript Type= protein_coding chr19 54573003 54587558 54573003 54587558 + transcript6334.chr19.nic@LILRA2 transcript6334.chr19.nic protein_coding 54573003,54573831,54574076,54574301,54574731,54575256,54575807,54587201 54573435,54573912,54574111,54574582,54575033,54575552,54576109,54587558 Gene ID= ENSG00000239998.5 TPM= 2.72 Transcript Type= NA chr19 54616926 54638021 54616926 54638021 + transcript6341.chr19.nic@LILRB1 transcript6341.chr19.nic protein_coding 54616926,54630517,54631026,54631271,54631500,54631935,54632464,54633016,54633638,54633971,54634641,54635104,54635259,54635557,54636497,54636732 54617349,54630633,54631107,54631306,54631787,54632237,54632760,54633318,54633688,54634021,54634763,54635179,54635296,54635609,54636652,54638021 Gene ID= ENSG00000104972.15 TPM= 6.79 Transcript Type= NA chr19 54617158 54637528 54617158 54637528 + ENST00000396331.5@LILRB1 ENST00000396331.5 protein_coding 54617158,54630517,54631026,54631271,54631500,54631935,54632464,54633016,54633638,54633974,54634641,54635104,54635259,54635557,54636497,54636732 54617349,54630633,54631107,54631306,54631787,54632237,54632760,54633318,54633688,54634021,54634763,54635179,54635296,54635609,54636652,54637528 Gene ID= ENSG00000104972.15 TPM= 1.36 Transcript Type= protein_coding chr19 54662128 54670359 54662128 54670359 + ENST00000391736.5@LILRB4 ENST00000391736.5 protein_coding 54662128,54662509,54662819,54663532,54663754,54664186,54664799,54665130,54665815,54666240,54666399,54666697,54667635,54667873 54662188,54662547,54663067,54663567,54664038,54664485,54664849,54665180,54665931,54666315,54666436,54666749,54667793,54670359 Gene ID= ENSG00000186818.12 TPM= 7.24 Transcript Type= protein_coding chr19 54966343 55001140 54966343 55001140 + ENST00000448584.6@NLRP2 ENST00000448584.6 protein_coding 54966343,54969999,54974500,54977752,54981617,54982162,54985047,54986151,54990022,54990502,54994269,54997317,55000760 54966467,54970295,54974544,54977823,54981682,54983728,54985217,54986315,54990192,54990672,54994439,54997487,55001140 Gene ID= ENSG00000022556.15 TPM= 3.62 Transcript Type= protein_coding chr19 54966389 55001140 54966389 55001140 + transcript6351.chr19.nic@NLRP2 transcript6351.chr19.nic protein_coding 54966389,54969999,54974500,54977752,54981617,54982162,54985047,54986151,54990022,54990502,54994269,54997317,55000760 54966467,54970295,54974544,54977823,54981682,54983728,54985217,54986315,54990393,54990672,54994439,54997487,55001140 Gene ID= ENSG00000022556.15 TPM= 1.81 Transcript Type= NA chr19 55044324 55063217 55044324 55063217 - ENST00000610356.4@RDH13 ENST00000610356.4 protein_coding 55062968,55059157,55056653,55048659,55048329,55047387,55044324 55063217,55059275,55056808,55048763,55048541,55047488,55045309 Gene ID= ENSG00000160439.15 TPM= 21.13 Transcript Type= protein_coding chr19 55044341 55063143 55044341 55063143 - transcript6356.chr19.nic@RDH13 transcript6356.chr19.nic protein_coding 55062968,55056653,55048659,55048329,55047387,55044341 55063143,55056808,55048763,55048541,55047488,55045309 Gene ID= ENSG00000160439.15 TPM= 2.11 Transcript Type= NA chr19 55044341 55063188 55044341 55063188 - transcript6357.chr19.nic@RDH13 transcript6357.chr19.nic protein_coding 55062968,55059157,55056653,55048659,55047387,55044341 55063188,55059275,55056808,55048763,55048541,55045309 Gene ID= ENSG00000160439.15 TPM= 2.11 Transcript Type= NA chr19 55080392 55087919 55080392 55087919 + ENST00000245618.5@EPS8L1 ENST00000245618.5 protein_coding 55080392,55080772,55081231,55081773,55082092,55082275,55082454,55083378,55083616,55085841,55086061,55086392,55086714,55087303,55087528 55080541,55080854,55081492,55081899,55082180,55082349,55082602,55083519,55083644,55085973,55086192,55086518,55086888,55087435,55087919 Gene ID= ENSG00000131037.14 TPM= 1.81 Transcript Type= protein_coding chr19 55090914 55117717 55090914 55117717 - transcript6364.chr19.nic@PPP1R12C transcript6364.chr19.nic protein_coding 55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090914 55117717,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092865,55092662,55092544,55092326,55091909,55091700,55091558 Gene ID= ENSG00000125503.12 TPM= 15.94 Transcript Type= NA chr19 55090914 55117638 55090914 55117638 - transcript6372.chr19.nic@PPP1R12C transcript6372.chr19.nic protein_coding 55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090914 55117638,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095600,55095358,55094798,55094435,55093233,55092865,55092662,55092544,55092326,55091909,55091700,55091558 Gene ID= ENSG00000125503.12 TPM= 2.81 Transcript Type= NA chr19 55090913 55117559 55090913 55117559 - ENST00000263433.7@PPP1R12C ENST00000263433.7 protein_coding 55117223,55112665,55112467,55103409,55098951,55098784,55096262,55096051,55095867,55095445,55095291,55094661,55094345,55093153,55093016,55092783,55092622,55092442,55092222,55091859,55091650,55090913 55117559,55112795,55112585,55103568,55099095,55098858,55096335,55096178,55095940,55095603,55095358,55094798,55094435,55093233,55093076,55092868,55092662,55092544,55092326,55091909,55091700,55091558 Gene ID= ENSG00000125503.12 TPM= 37.67 Transcript Type= protein_coding chr19 55151767 55156481 55151767 55156481 - ENST00000585806.5@TNNI3 ENST00000585806.5 protein_coding 55156201,55154741,55154030,55151767 55156481,55154830,55154206,55151917 Gene ID= ENSG00000129991.12 TPM= 1.81 Transcript Type= retained_intron chr19 55151770 55157732 55151770 55157732 - ENST00000344887.9@TNNI3 ENST00000344887.9 protein_coding 55157579,55157296,55157050,55156603,55156201,55154741,55154030,55151770 55157732,55157308,55157133,55156644,55156332,55154830,55154206,55151917 Gene ID= ENSG00000129991.12 TPM= 10.87 Transcript Type= protein_coding chr19 55158663 55166651 55158663 55166651 - ENST00000391720.8@DNAAF3 ENST00000391720.8 protein_coding 55166512,55166329,55165858,55165370,55162133,55161643,55161293,55161065,55160640,55159899,55159533,55158663 55166651,55166417,55166000,55165463,55162290,55161825,55161418,55161187,55160775,55160013,55159607,55159449 Gene ID= ENSG00000167646.13 TPM= 5.43 Transcript Type= protein_coding chr19 55158662 55166637 55158662 55166637 - transcript6381.chr19.nic@DNAAF3 transcript6381.chr19.nic protein_coding 55166523,55166329,55165858,55165370,55162133,55161643,55161293,55161065,55160640,55159899,55159533,55158662 55166637,55166417,55166000,55165463,55162290,55161825,55161418,55161187,55160775,55160013,55159720,55159449 Gene ID= ENSG00000167646.13 TPM= 3.62 Transcript Type= NA chr19 55158662 55166625 55158662 55166625 - transcript6383.chr19.nic@DNAAF3 transcript6383.chr19.nic protein_coding 55166512,55166329,55165858,55165370,55162133,55161643,55161293,55160640,55159899,55159533,55158662 55166625,55166417,55166000,55165463,55162290,55161825,55161418,55161187,55160013,55159607,55159449 Gene ID= ENSG00000167646.13 TPM= 3.62 Transcript Type= NA chr19 55181231 55207196 55181231 55207196 - transcript6393.chr19.nnic@PTPRH transcript6393.chr19.nnic protein_coding 55207068,55206689,55205326,55203782,55202056,55200236,55198643,55197117,55196522,55191663,55191501,55188078,55187513,55186464,55186225,55185862,55185502,55182016,55181231 55207196,55206955,55205592,55204048,55202322,55200502,55198912,55197416,55196788,55191741,55191548,55188168,55187603,55186540,55186359,55185984,55185662,55182151,55181903 Gene ID= ENSG00000080031.9 TPM= 5.05 Transcript Type= NA chr19 55181231 55207277 55181231 55207277 - transcript6397.chr19.nic@PTPRH transcript6397.chr19.nic protein_coding 55207166,55206689,55205326,55203782,55202056,55200236,55198643,55197117,55196522,55191663,55191501,55188078,55187513,55186464,55186225,55185862,55185502,55182016,55181231 55207277,55206976,55205592,55204048,55202322,55200502,55198912,55197416,55196788,55191741,55191548,55188168,55187603,55186540,55186359,55185984,55185662,55182151,55181903 Gene ID= ENSG00000080031.9 TPM= 20.45 Transcript Type= NA chr19 55229780 55258995 55229780 55258995 - ENST00000412770.6@PPP6R1 ENST00000412770.6 protein_coding 55258435,55246877,55245492,55245265,55245120,55242376,55242166,55241477,55241239,55240945,55240236,55239999,55239826,55239594,55239405,55236913,55236643,55232075,55231802,55231598,55231410,55230774,55230613,55229780 55258995,55247109,55245678,55245402,55245185,55242488,55242279,55241639,55241391,55241079,55240300,55240114,55239911,55239683,55239502,55236970,55236821,55232211,55231982,55231668,55231491,55230884,55230684,55230531 Gene ID= ENSG00000105063.18 TPM= 246.31 Transcript Type= protein_coding chr19 55262353 55280059 55262353 55280059 - transcript6423.chr19.nic@HSPBP1 transcript6423.chr19.nic protein_coding 55279930,55279399,55277642,55274398,55266131,55265886,55265278,55262353 55280059,55279702,55277846,55274622,55266286,55265982,55265389,55262682 Gene ID= ENSG00000133265.10 TPM= 2.11 Transcript Type= NA chr19 55262231 55280360 55262231 55280360 - ENST00000255631.9@HSPBP1 ENST00000255631.9 protein_coding 55280218,55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262231 55280360,55280108,55279702,55277846,55274622,55266286,55265982,55265389,55262682 Gene ID= ENSG00000133265.10 TPM= 32.45 Transcript Type= protein_coding chr19 55262353 55280177 55262353 55280177 - ENST00000433386.6@HSPBP1 ENST00000433386.6 protein_coding 55280035,55279399,55277642,55274398,55266131,55265886,55265278,55262353 55280177,55279702,55277846,55274622,55266286,55265982,55265389,55262682 Gene ID= ENSG00000133265.10 TPM= 16.15 Transcript Type= protein_coding chr19 55339853 55348120 55339853 55348120 + ENST00000255613.7@KMT5C ENST00000255613.7 protein_coding 55339853,55341794,55342215,55342742,55343680,55343978,55346213,55346500,55346956 55339957,55342046,55342380,55342851,55343843,55343997,55346349,55346687,55348120 Gene ID= ENSG00000133247.13 TPM= 2.72 Transcript Type= protein_coding chr19 55339868 55348120 55339868 55348120 + transcript6429.chr19.nic@KMT5C transcript6429.chr19.nic protein_coding 55339868,55341794,55342742,55343680,55343978,55346213,55346500,55346956 55339957,55342380,55342851,55343843,55343997,55346349,55346687,55348120 Gene ID= ENSG00000133247.13 TPM= 1.81 Transcript Type= NA chr19 55379245 55384598 55379245 55384598 - ENST00000444469.3@TMEM238 ENST00000444469.3 protein_coding 55383722,55379245 55384598,55379367 Gene ID= ENSG00000233493.3 TPM= 17.21 Transcript Type= protein_coding chr19 55385943 55388343 55385943 55388343 + ENST00000560881.5@RPL28 ENST00000560881.5 protein_coding 55385943,55386350,55386570,55388243 55385965,55386438,55388048,55388343 Gene ID= ENSG00000108107.14 TPM= 6.34 Transcript Type= retained_intron chr19 55452989 55461672 55452989 55461672 - transcript6444.chr19.nnic@ISOC2 transcript6444.chr19.nnic protein_coding 55461512,55456349,55455636,55455260,55454989,55453355,55452989 55461672,55456489,55455845,55455330,55455106,55453388,55453017 Gene ID= ENSG00000063241.7 TPM= 2.11 Transcript Type= NA chr19 55452989 55461569 55452989 55461569 - ENST00000425675.6@ISOC2 ENST00000425675.6 protein_coding 55461512,55456349,55455636,55455260,55454989,55452989 55461569,55456489,55455845,55455330,55455106,55453388 Gene ID= ENSG00000063241.7 TPM= 6.18 Transcript Type= protein_coding chr19 55452989 55461645 55452989 55461645 - ENST00000085068.7@ISOC2 ENST00000085068.7 protein_coding 55461512,55456349,55455636,55455260,55454989,55452989 55461645,55456489,55455845,55455378,55455106,55453388 Gene ID= ENSG00000063241.7 TPM= 2.56 Transcript Type= protein_coding chr19 55485188 55487566 55485188 55487566 + transcript6453.chr19.nnic@NAT14 transcript6453.chr19.nnic protein_coding 55485188,55485661,55487054 55485258,55485780,55487566 Gene ID= ENSG00000090971.4 TPM= 1.81 Transcript Type= NA chr19 55485004 55487568 55485004 55487568 + ENST00000205194.4@NAT14 ENST00000205194.4 protein_coding 55485004,55485661,55486408 55485258,55485780,55487568 Gene ID= ENSG00000090971.4 TPM= 18.11 Transcript Type= protein_coding chr19 55591372 55599605 55591372 55599605 - transcript6460.chr19.nic@FIZ1 transcript6460.chr19.nic protein_coding 55599474,55597572,55595620,55591372 55599605,55597901,55595734,55593646 Gene ID= ENSG00000179943.7 TPM= 6.34 Transcript Type= NA chr19 55591372 55598986 55591372 55598986 - transcript6462.chr19.nic@FIZ1 transcript6462.chr19.nic protein_coding 55598495,55597572,55591372 55598986,55597901,55593646 Gene ID= ENSG00000179943.7 TPM= 2.72 Transcript Type= NA chr19 55591371 55599527 55591371 55599527 - ENST00000221665.4@FIZ1 ENST00000221665.4 protein_coding 55599474,55597572,55591371 55599527,55597901,55593646 Gene ID= ENSG00000179943.7 TPM= 30.79 Transcript Type= protein_coding chr19 55600369 55603136 55600369 55603136 + ENST00000301073.3@ZNF524 ENST00000301073.3 protein_coding 55600369,55602075 55600408,55603136 Gene ID= ENSG00000171443.6 TPM= 19.92 Transcript Type= protein_coding chr19 55620742 55624601 55620742 55624601 - ENST00000325351.4@ZNF784 ENST00000325351.4 protein_coding 55624484,55620742 55624601,55622644 Gene ID= ENSG00000179922.5 TPM= 28.98 Transcript Type= protein_coding chr19 55640896 55643469 55640896 55643469 + ENST00000325333.9@ZNF580 ENST00000325333.9 protein_coding 55640896,55642497 55641183,55643469 Gene ID= ENSG00000213015.8 TPM= 64.29 Transcript Type= protein_coding chr19 55643810 55645621 55643810 55645621 + ENST00000588537.1@ZNF581 ENST00000588537.1 protein_coding 55643810,55644553 55643840,55645621 Gene ID= ENSG00000171425.9 TPM= 2.26 Transcript Type= protein_coding chr19 55643547 55645622 55643547 55645622 + ENST00000270451.5@ZNF581 ENST00000270451.5 protein_coding 55643547,55644553 55643774,55645622 Gene ID= ENSG00000171425.9 TPM= 36.67 Transcript Type= protein_coding chr19 55648233 55653161 55648233 55653161 + ENST00000591578.5@CCDC106 ENST00000591578.5 protein_coding 55648233,55648758,55649205,55649408,55651283,55652430 55648277,55649077,55649309,55649584,55651495,55653161 Gene ID= ENSG00000173581.7 TPM= 7.24 Transcript Type= protein_coding chr19 55648035 55653161 55648035 55653161 + ENST00000308964.7@CCDC106 ENST00000308964.7 protein_coding 55648035,55649002,55649205,55649408,55651283,55652430 55648277,55649077,55649309,55649584,55651495,55653161 Gene ID= ENSG00000173581.7 TPM= 18.11 Transcript Type= protein_coding chr19 55648233 55653161 55648233 55653161 + ENST00000588740.5@CCDC106 ENST00000588740.5 protein_coding 55648233,55648946,55649205,55649408,55651283,55652430 55648277,55649077,55649309,55649584,55651495,55653161 Gene ID= ENSG00000173581.7 TPM= 7.24 Transcript Type= protein_coding chr19 55654137 55674715 55654137 55674715 + transcript6477.chr19.nnic@U2AF2 transcript6477.chr19.nnic protein_coding 55654137,55659210,55660177,55660516,55661038,55662502,55663606,55668507,55668670,55669083,55669444,55673934,55674636 55655153,55659345,55660221,55660619,55661189,55662618,55663744,55668586,55668792,55669169,55669692,55673964,55674715 Gene ID= ENSG00000063244.12 TPM= 2.72 Transcript Type= NA chr19 55675245 55695766 55675245 55695766 + ENST00000085079.11@EPN1 ENST00000085079.11 protein_coding 55675245,55678527,55685396,55688870,55689867,55691754,55692686,55692954,55694726,55695148 55675435,55678855,55685645,55688994,55689950,55692057,55692796,55693037,55694983,55695766 Gene ID= ENSG00000063245.14 TPM= 27.17 Transcript Type= protein_coding chr19 56087366 56112444 56087366 56112444 - transcript6501.chr19.nnic@ZNF787 transcript6501.chr19.nnic protein_coding 56112366,56103139,56087366 56112444,56103227,56089092 Gene ID= ENSG00000142409.5 TPM= 2.72 Transcript Type= NA chr19 56087366 56121280 56087366 56121280 - ENST00000610935.1@ZNF787 ENST00000610935.1 protein_coding 56121172,56103139,56087366 56121280,56103227,56089092 Gene ID= ENSG00000142409.5 TPM= 57.95 Transcript Type= protein_coding chr19 56141321 56160893 56141321 56160893 + ENST00000592949.5@ZNF444 ENST00000592949.5 protein_coding 56141321,56146247,56146890,56158494,56159627 56141357,56146420,56147208,56158602,56160893 Gene ID= ENSG00000167685.14 TPM= 26.26 Transcript Type= protein_coding chr19 56221312 56314562 56221312 56314562 - transcript6513.chr19.nic@ZSCAN5A transcript6513.chr19.nic protein_coding 56314250,56313283,56224663,56223631,56222591,56221312 56314562,56313384,56225173,56223834,56222741,56222326 Gene ID= ENSG00000131848.9 TPM= 2.72 Transcript Type= NA chr19 56368321 56379828 56368321 56379828 + ENST00000495307.5@ZNF542P ENST00000495307.5 transcribed_unprocessed_pseudogene 56368321,56368866,56373157,56373531,56376867 56368460,56368936,56373283,56373623,56379828 Gene ID= ENSG00000240225.10 TPM= 7.24 Transcript Type= processed_transcript chr19 56375848 56393520 56375848 56393520 - transcript6526.chr19.nic@ZNF582 transcript6526.chr19.nic protein_coding 56393220,56391744,56390375,56390001,56375848 56393520,56391832,56390501,56390096,56376121 Gene ID= ENSG00000018869.16 TPM= 1.81 Transcript Type= NA chr19 56393674 56399174 56393674 56399174 + transcript6531.chr19.nic@ZNF582-AS1 transcript6531.chr19.nic lincRNA 56393674,56394217,56397881,56398277,56398894 56394053,56394441,56398048,56398383,56399174 Gene ID= ENSG00000267454.5 TPM= 2.72 Transcript Type= NA chr19 56404316 56424594 56404316 56424594 + transcript6538.chr19.nnic@ZNF583 transcript6538.chr19.nnic protein_coding 56404316,56407026,56413959,56414345,56421431,56422891 56404452,56407123,56414085,56414440,56421525,56424594 Gene ID= ENSG00000198440.9 TPM= 1.81 Transcript Type= NA chr19 56439327 56477569 56439327 56477569 - transcript6545.chr19.nnic@ZNF667 transcript6545.chr19.nnic protein_coding 56477451,56462338,56460689,56458155,56439327 56477569,56462429,56460815,56458247,56442741 Gene ID= ENSG00000198046.11 TPM= 2.26 Transcript Type= NA chr19 56439325 56477374 56439325 56477374 - ENST00000292069.10@ZNF667 ENST00000292069.10 protein_coding 56477272,56462338,56460689,56458155,56439325 56477374,56462429,56460815,56458247,56442741 Gene ID= ENSG00000198046.11 TPM= 7.7 Transcript Type= protein_coding chr19 56439330 56477367 56439330 56477367 - ENST00000592189.5@ZNF667 ENST00000592189.5 protein_coding 56477272,56462338,56460689,56458155,56449557,56439330 56477367,56462429,56460815,56458247,56449657,56442741 Gene ID= ENSG00000198046.11 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr19 56478131 56495432 56478131 56495432 + ENST00000585445.1@ZNF667-AS1 ENST00000585445.1 lincRNA 56478131,56494163 56478381,56495432 Gene ID= ENSG00000166770.10 TPM= 35.32 Transcript Type= lincRNA chr19 56507843 56530221 56507843 56530221 + ENST00000308031.9@ZNF471 ENST00000308031.9 protein_coding 56507843,56511517,56516275,56518482,56524324 56507920,56511604,56516401,56518577,56530221 Gene ID= ENSG00000196263.7 TPM= 1.81 Transcript Type= protein_coding chr19 56545566 56567411 56545566 56567411 - ENST00000596587.1@AC005498.3 ENST00000596587.1 antisense_RNA 56567073,56545566 56567411,56547271 Gene ID= ENSG00000269696.1 TPM= 3.62 Transcript Type= antisense_RNA chr19 56661981 56671760 56661981 56671760 - ENST00000537055.3@ZNF835 ENST00000537055.3 protein_coding 56671576,56661981 56671760,56665245 Gene ID= ENSG00000127903.13 TPM= 7.24 Transcript Type= protein_coding chr19 56774562 56840727 56774562 56840727 - transcript6567.chr19.nic@ZIM2 transcript6567.chr19.nic protein_coding 56840582,56836018,56826388,56824262,56823590,56822753,56821651,56818600,56789872,56782400,56781953,56779377,56774562 56840727,56836104,56826463,56824427,56823679,56822836,56821754,56818702,56789951,56782471,56782121,56779472,56775529 Gene ID= ENSG00000269699.5 TPM= 1.81 Transcript Type= NA chr19 57191500 57222846 57191500 57222846 + ENST00000263095.10@ZNF264 ENST00000263095.10 protein_coding 57191500,57193875,57205397,57211354 57191946,57194001,57205492,57222846 Gene ID= ENSG00000083844.10 TPM= 4.53 Transcript Type= protein_coding chr19 57320509 57330776 57320509 57330776 + ENST00000321545.4@ZNF543 ENST00000321545.4 protein_coding 57320509,57323682,57326633,57327704 57320871,57323808,57326728,57330776 Gene ID= ENSG00000178229.7 TPM= 6.34 Transcript Type= protein_coding chr19 57363511 57365353 57363511 57365353 + ENST00000543226.1@AC003002.1 ENST00000543226.1 protein_coding 57363511,57364815 57363703,57365353 Gene ID= ENSG00000256060.2 TPM= 19.02 Transcript Type= protein_coding chr19 57389854 57424744 57389854 57424744 + transcript6586.chr19.nic@AC003002.4 transcript6586.chr19.nic protein_coding 57389854,57394188,57397048,57410880,57413596,57417912,57419635 57390114,57394223,57397174,57411406,57413636,57418038,57424744 Gene ID= ENSG00000269533.5 TPM= 3.62 Transcript Type= NA chr19 57435334 57447098 57435334 57447098 + transcript6595.chr19.nnic@ZNF749 transcript6595.chr19.nnic protein_coding 57435334,57441885,57443291 57435667,57442011,57447098 Gene ID= ENSG00000186230.6 TPM= 1.81 Transcript Type= NA chr19 57487718 57496084 57487718 57496084 + transcript6611.chr19.nnic@ZNF419 transcript6611.chr19.nnic protein_coding 57487718,57491471,57492113,57494368 57487983,57491597,57492211,57496084 Gene ID= ENSG00000105136.20 TPM= 4.53 Transcript Type= NA chr19 57487718 57508473 57487718 57508473 + transcript6601.chr19.nic@AC003005.1 transcript6601.chr19.nic protein_coding 57487718,57490147,57491468,57504657,57505302,57506358 57487983,57490185,57491597,57504786,57505400,57508473 Gene ID= ENSG00000268107.5 TPM= 3.17 Transcript Type= NA chr19 57487718 57508472 57487718 57508472 + transcript6603.chr19.nnic@AC003005.1 transcript6603.chr19.nnic protein_coding 57487718,57491471,57504657,57505302,57506358,57508157 57487983,57491597,57504786,57505400,57507990,57508472 Gene ID= ENSG00000268107.5 TPM= 2.72 Transcript Type= NA chr19 57487718 57508473 57487718 57508473 + transcript6604.chr19.nic@AC003005.1 transcript6604.chr19.nic protein_coding 57487718,57491471,57504657,57505302,57506358 57487983,57491597,57504786,57505400,57508473 Gene ID= ENSG00000268107.5 TPM= 3.17 Transcript Type= NA chr19 57499865 57508472 57499865 57508472 + transcript6605.chr19.nnic@ZNF773 transcript6605.chr19.nnic protein_coding 57499865,57504660,57505302,57506358,57508157 57500113,57504786,57505400,57507990,57508472 Gene ID= ENSG00000152439.12 TPM= 3.62 Transcript Type= NA chr19 57527393 57540876 57527393 57540876 + ENST00000376233.7@ZNF549 ENST00000376233.7 protein_coding 57527393,57531070,57535144,57537204 57527606,57531108,57535270,57540876 Gene ID= ENSG00000121406.8 TPM= 3.62 Transcript Type= protein_coding chr19 57541284 57559863 57541284 57559863 - transcript6616.chr19.nnic@ZNF550 transcript6616.chr19.nnic protein_coding 57559656,57556231,57552627,57546457,57543651,57541284 57559863,57556357,57552722,57547993,57543931,57543243 Gene ID= ENSG00000251369.8 TPM= 2.72 Transcript Type= NA chr19 57541836 57559863 57541836 57559863 - ENST00000457177.5@ZNF550 ENST00000457177.5 protein_coding 57559656,57556231,57552627,57546457,57541836 57559863,57556357,57552722,57547993,57543243 Gene ID= ENSG00000251369.8 TPM= 9.96 Transcript Type= protein_coding chr19 57571566 57578927 57571566 57578927 - ENST00000196489.3@ZNF416 ENST00000196489.3 protein_coding 57578672,57578057,57575804,57571566 57578927,57578098,57575930,57573701 Gene ID= ENSG00000083817.8 TPM= 7.24 Transcript Type= protein_coding chr19 57584146 57593889 57584146 57593889 + transcript6627.chr19.nic@ZIK1 transcript6627.chr19.nic protein_coding 57584146,57584952,57588539,57590011 57584612,57584990,57588665,57593889 Gene ID= ENSG00000171649.11 TPM= 3.62 Transcript Type= NA chr19 57614251 57624723 57614251 57624723 + ENST00000396161.9@ZNF134 ENST00000396161.9 protein_coding 57614251,57619412,57620160 57614503,57619508,57624723 Gene ID= ENSG00000213762.11 TPM= 20.83 Transcript Type= protein_coding chr19 57633168 57644042 57633168 57644042 + transcript6644.chr19.nic@ZNF211 transcript6644.chr19.nic protein_coding 57633168,57633713,57640704 57633436,57634755,57644042 Gene ID= ENSG00000121417.13 TPM= 1.81 Transcript Type= NA chr19 57633216 57642764 57633216 57642764 + ENST00000535785.1@ZNF211 ENST00000535785.1 protein_coding 57633216,57633713,57634023,57634629,57640704 57633436,57633905,57634061,57634755,57642764 Gene ID= ENSG00000121417.13 TPM= 3.02 Transcript Type= nonsense_mediated_decay chr19 57633181 57642764 57633181 57642764 + ENST00000540556.5@ZNF211 ENST00000540556.5 protein_coding 57633181,57633786,57634023,57634629,57639912,57640704 57633436,57633905,57634061,57634755,57640067,57642764 Gene ID= ENSG00000121417.13 TPM= 1.2 Transcript Type= nonsense_mediated_decay chr19 57633228 57642768 57633228 57642768 + ENST00000240731.4@ZNF211 ENST00000240731.4 protein_coding 57633228,57634023,57634629,57640704 57633436,57634061,57634755,57642768 Gene ID= ENSG00000121417.13 TPM= 3.02 Transcript Type= protein_coding chr19 57681979 57690654 57681979 57690654 + ENST00000282296.9@ZNF551 ENST00000282296.9 protein_coding 57681979,57685262,57686481 57682244,57685385,57690654 Gene ID= ENSG00000204519.10 TPM= 3.62 Transcript Type= protein_coding chr19 57719751 57727624 57719751 57727624 - ENST00000317398.10@ZNF671 ENST00000317398.10 protein_coding 57727391,57723214,57722316,57719751 57727624,57723340,57722438,57721697 Gene ID= ENSG00000083814.13 TPM= 22.64 Transcript Type= protein_coding chr19 57746796 57758159 57746796 57758159 + ENST00000317178.9@ZNF776 ENST00000317178.9 protein_coding 57746796,57750785,57753291 57747091,57750911,57758159 Gene ID= ENSG00000152443.12 TPM= 3.62 Transcript Type= protein_coding chr19 57769670 57780577 57769670 57780577 + ENST00000396154.6@ZNF586 ENST00000396154.6 protein_coding 57769670,57776543,57778751 57769878,57776669,57780577 Gene ID= ENSG00000083828.15 TPM= 2.72 Transcript Type= protein_coding chr19 57940833 57947671 57940833 57947671 - ENST00000282308.3@ZNF256 ENST00000282308.3 protein_coding 57947442,57943934,57940833 57947671,57944060,57942647 Gene ID= ENSG00000152454.3 TPM= 2.72 Transcript Type= protein_coding chr19 57958439 58002832 57958439 58002832 - transcript6680.chr19.nnic@ZNF606 transcript6680.chr19.nnic protein_coding 58002396,58001289,58000683,57999808,57988595,57988207,57978654,57974099,57972463,57966530,57961451,57958439 58002832,58001370,58000739,57999896,57988721,57988302,57980279,57974203,57972504,57966632,57961551,57958717 Gene ID= ENSG00000166704.11 TPM= 3.62 Transcript Type= NA chr19 58083837 58098263 58083837 58098263 - transcript6693.chr19.nic@ZSCAN18 transcript6693.chr19.nic protein_coding 58098115,58089865,58088688,58087316,58086906,58086174,58083837 58098263,58090386,58088837,58087404,58087008,58086266,58085379 Gene ID= ENSG00000121413.12 TPM= 19.02 Transcript Type= NA chr19 58083859 58088027 58083859 58088027 - ENST00000596372.1@ZSCAN18 ENST00000596372.1 protein_coding 58087316,58086906,58086174,58083859 58088027,58087008,58086266,58085379 Gene ID= ENSG00000121413.12 TPM= 1.81 Transcript Type= retained_intron chr19 58126330 58155105 58126330 58155105 - transcript6702.chr19.nic@ZNF329 transcript6702.chr19.nic protein_coding 58154735,58143105,58142557,58126330 58155105,58143198,58142661,58129511 Gene ID= ENSG00000181894.14 TPM= 4.71 Transcript Type= NA chr19 58126252 58150778 58126252 58150778 - transcript6703.chr19.nnic@ZNF329 transcript6703.chr19.nnic protein_coding 58150752,58142557,58126252 58150778,58142661,58129511 Gene ID= ENSG00000181894.14 TPM= 1.99 Transcript Type= NA chr19 58126331 58155100 58126331 58155100 - transcript6704.chr19.nnic@ZNF329 transcript6704.chr19.nnic protein_coding 58154428,58142557,58126331 58155100,58142661,58129511 Gene ID= ENSG00000181894.14 TPM= 1.99 Transcript Type= NA chr19 58126329 58155168 58126329 58155168 - transcript6705.chr19.nnic@ZNF329 transcript6705.chr19.nnic protein_coding 58154735,58142557,58126329 58155168,58142661,58129511 Gene ID= ENSG00000181894.14 TPM= 7.43 Transcript Type= NA chr19 58126328 58150778 58126328 58150778 - ENST00000598312.5@ZNF329 ENST00000598312.5 protein_coding 58150752,58143105,58142557,58126328 58150778,58143198,58142661,58129511 Gene ID= ENSG00000181894.14 TPM= 1.09 Transcript Type= protein_coding chr19 58183414 58213563 58183414 58213563 + transcript6713.chr19.nic@ZNF274 transcript6713.chr19.nic protein_coding 58183414,58185712,58186947,58206720,58209961,58211560,58212161 58183998,58185838,58187042,58207202,58210073,58211686,58213563 Gene ID= ENSG00000171606.17 TPM= 7.24 Transcript Type= NA chr19 58183029 58213562 58183029 58213562 + ENST00000424679.6@ZNF274 ENST00000424679.6 protein_coding 58183029,58206720,58209961,58211560,58212161 58183442,58207202,58210073,58211686,58213562 Gene ID= ENSG00000171606.17 TPM= 1.81 Transcript Type= protein_coding chr19 58183427 58213552 58183427 58213552 + ENST00000326804.8@ZNF274 ENST00000326804.8 protein_coding 58183427,58183921,58185697,58186947,58206720,58209961,58211560,58212161 58183442,58183998,58185838,58187042,58207202,58210073,58211686,58213552 Gene ID= ENSG00000171606.17 TPM= 2.72 Transcript Type= protein_coding chr19 58228914 58263640 58228914 58263640 + transcript6718.chr19.nnic@ZNF544 transcript6718.chr19.nnic protein_coding 58228914,58229468,58230394,58237249,58243965,58246301,58246746,58260851 58228946,58229570,58230462,58237334,58244056,58246427,58246794,58263640 Gene ID= ENSG00000198131.13 TPM= 2.17 Transcript Type= NA chr19 58228914 58263640 58228914 58263640 + transcript6722.chr19.nic@ZNF544 transcript6722.chr19.nic protein_coding 58228914,58229468,58230394,58243965,58246301,58246711,58260851 58228946,58229570,58230462,58244056,58246427,58246794,58263640 Gene ID= ENSG00000198131.13 TPM= 3.98 Transcript Type= NA chr19 58228594 58263644 58228594 58263644 + ENST00000599227.5@ZNF544 ENST00000599227.5 protein_coding 58228594,58229468,58230394,58243965,58246301,58246746,58260851 58228946,58229570,58230462,58244056,58246427,58246794,58263644 Gene ID= ENSG00000198131.13 TPM= 5.8 Transcript Type= protein_coding chr19 58228914 58263640 58228914 58263640 + transcript6726.chr19.nic@ZNF544 transcript6726.chr19.nic protein_coding 58228914,58229468,58230394,58243965,58246301,58246746,58260851 58228946,58229570,58230497,58244056,58246427,58246794,58263640 Gene ID= ENSG00000198131.13 TPM= 3.08 Transcript Type= NA chr19 58228975 58263644 58228975 58263644 + ENST00000596825.5@ZNF544 ENST00000596825.5 protein_coding 58228975,58229468,58230394,58243965,58246301,58246746,58260851 58229256,58229570,58230462,58244056,58246427,58246794,58263644 Gene ID= ENSG00000198131.13 TPM= 1.27 Transcript Type= protein_coding chr19 58257270 58278808 58257270 58278808 - ENST00000597230.2@AC020915.4 ENST00000597230.2 antisense_RNA 58278523,58257270 58278808,58259691 Gene ID= ENSG00000268516.2 TPM= 9.06 Transcript Type= antisense_RNA chr19 58278951 58302805 58278951 58302805 + ENST00000621650.1@ZNF8 ENST00000621650.1 protein_coding 58278951,58285717,58286110,58294098 58279147,58285843,58286205,58302805 Gene ID= ENSG00000278129.1 TPM= 5.43 Transcript Type= protein_coding chr19 58305319 58315663 58305319 58315663 + ENST00000413518.5@AC020915.1 ENST00000413518.5 protein_coding 58305319,58306088,58312166,58314748 58305445,58306216,58312462,58315663 Gene ID= ENSG00000142396.10 TPM= 27.17 Transcript Type= protein_coding chr19 58305374 58315202 58305374 58315202 + ENST00000427361.5@AC020915.1 ENST00000427361.5 protein_coding 58305374,58306088,58312197,58314748 58305445,58306216,58312462,58315202 Gene ID= ENSG00000142396.10 TPM= 2.72 Transcript Type= protein_coding chr19 58314782 58327241 58314782 58327241 - transcript6741.chr19.nic@AC010642.2 transcript6741.chr19.nic antisense_RNA 58326823,58325275,58314782 58327241,58325361,58315036 Gene ID= ENSG00000283103.1 TPM= 11.77 Transcript Type= NA chr19 58346860 58347657 58346860 58347657 - ENST00000598345.1@A1BG ENST00000598345.1 protein_coding 58347353,58346860 58347657,58347029 Gene ID= ENSG00000121410.11 TPM= 7.24 Transcript Type= retained_intron chr19 58355561 58362848 58355561 58362848 - ENST00000425453.3@ZNF497 ENST00000425453.3 protein_coding 58362677,58355561 58362848,58357649 Gene ID= ENSG00000174586.10 TPM= 1.81 Transcript Type= protein_coding chr19 58367618 58381022 58367618 58381022 - ENST00000427624.2@ZNF837 ENST00000427624.2 protein_coding 58380941,58369717,58367618 58381022,58369928,58369361 Gene ID= ENSG00000152475.6 TPM= 7.24 Transcript Type= protein_coding chr19 58367623 58381060 58367623 58381060 - ENST00000597582.1@ZNF837 ENST00000597582.1 protein_coding 58380941,58369819,58367623 58381060,58369928,58369361 Gene ID= ENSG00000152475.6 TPM= 10.87 Transcript Type= protein_coding chr19 58386400 58394806 58386400 58394806 + ENST00000601521.5@RPS5 ENST00000601521.5 protein_coding 58386400,58387032,58388137,58392976,58393359,58394497,58394682 58386622,58387339,58388245,58393185,58393487,58394595,58394806 Gene ID= ENSG00000083845.8 TPM= 474.51 Transcript Type= protein_coding chr19 58387269 58394803 58387269 58394803 + ENST00000196551.7@RPS5 ENST00000196551.7 protein_coding 58387269,58388137,58392976,58393359,58394497,58394682 58387339,58388245,58393185,58393487,58394595,58394803 Gene ID= ENSG00000083845.8 TPM= 488.99 Transcript Type= protein_coding chr19 58387264 58394804 58387264 58394804 + ENST00000598098.5@RPS5 ENST00000598098.5 protein_coding 58387264,58388137,58393359,58394497,58394682 58387339,58388245,58393487,58394595,58394804 Gene ID= ENSG00000083845.8 TPM= 2.26 Transcript Type= protein_coding chr19 58408688 58418310 58408688 58418310 + ENST00000593920.5@ZNF584 ENST00000593920.5 protein_coding 58408688,58410006,58415524,58416811 58409165,58410091,58415646,58418310 Gene ID= ENSG00000171574.17 TPM= 5.43 Transcript Type= protein_coding chr19 58408625 58418327 58408625 58418327 + ENST00000306910.8@ZNF584 ENST00000306910.8 protein_coding 58408625,58409941,58415524,58416811 58409165,58410091,58415646,58418327 Gene ID= ENSG00000171574.17 TPM= 5.43 Transcript Type= protein_coding chr19 58432814 58440222 58432814 58440222 - ENST00000254166.3@ZNF132 ENST00000254166.3 protein_coding 58439759,58437047,58432814 58440222,58437215,58435211 Gene ID= ENSG00000131849.11 TPM= 1.81 Transcript Type= protein_coding chr19 58451604 58457833 58451604 58457833 + ENST00000336614.8@ZNF324B ENST00000336614.8 protein_coding 58451604,58453696,58454228,58455183 58451704,58453822,58454344,58457833 Gene ID= ENSG00000249471.7 TPM= 3.62 Transcript Type= protein_coding chr19 58467364 58473414 58467364 58473414 + transcript6779.chr19.nnic@ZNF324 transcript6779.chr19.nnic protein_coding 58467364,58469180,58469728,58470731 58467625,58469306,58469844,58473414 Gene ID= ENSG00000083812.11 TPM= 3.62 Transcript Type= NA chr19 58467096 58473398 58467096 58473398 + ENST00000196482.3@ZNF324 ENST00000196482.3 protein_coding 58467096,58469180,58469728,58470731 58467183,58469306,58469844,58473398 Gene ID= ENSG00000083812.11 TPM= 19.92 Transcript Type= protein_coding chr19 58475873 58481254 58475873 58481254 + transcript6780.chr19.nic@ZNF446 transcript6780.chr19.nic protein_coding 58475873,58477179,58477637,58478087,58479643,58479930,58480176 58476196,58477560,58477826,58478181,58479727,58480019,58481254 Gene ID= ENSG00000083838.15 TPM= 27.17 Transcript Type= NA chr19 58475873 58481227 58475873 58481227 + transcript6781.chr19.nnic@ZNF446 transcript6781.chr19.nnic protein_coding 58475873,58477179,58477637,58478087,58479643,58479930,58480293 58476196,58477560,58477826,58478181,58479727,58480019,58481227 Gene ID= ENSG00000083838.15 TPM= 1.81 Transcript Type= NA chr19 58476151 58481226 58476151 58481226 + transcript6783.chr19.nic@ZNF446 transcript6783.chr19.nic protein_coding 58476151,58477179,58477637,58478087,58479930 58476196,58477560,58477826,58479727,58481226 Gene ID= ENSG00000083838.15 TPM= 1.81 Transcript Type= NA chr19 58498333 58499275 58498333 58499275 - ENST00000594786.1@SLC27A5 ENST00000594786.1 protein_coding 58499123,58498785,58498333 58499275,58498915,58498691 Gene ID= ENSG00000083807.9 TPM= 6.34 Transcript Type= protein_coding chr19 58513532 58519619 58513532 58519619 - transcript6787.chr19.nnic@ZBTB45 transcript6787.chr19.nnic protein_coding 58519270,58516395,58513532 58519619,58517673,58514310 Gene ID= ENSG00000119574.12 TPM= 3.02 Transcript Type= NA chr19 58513530 58520222 58513530 58520222 - ENST00000594051.5@ZBTB45 ENST00000594051.5 protein_coding 58519742,58516395,58513530 58520222,58517673,58514310 Gene ID= ENSG00000119574.12 TPM= 18.41 Transcript Type= protein_coding chr19 58513530 58519554 58513530 58519554 - ENST00000354590.7@ZBTB45 ENST00000354590.7 protein_coding 58519263,58516395,58513530 58519554,58517673,58514310 Gene ID= ENSG00000119574.12 TPM= 2.11 Transcript Type= protein_coding chr19 58544469 58550716 58544469 58550716 + ENST00000253024.9@TRIM28 ENST00000253024.9 protein_coding 58544469,58545425,58545764,58547376,58547597,58547792,58548034,58548294,58548486,58548740,58548862,58548988,58549331,58549737,58549949,58550147,58550377 58545097,58545537,58545896,58547511,58547713,58547906,58548180,58548408,58548592,58548776,58548910,58549240,58549650,58549860,58550035,58550284,58550716 Gene ID= ENSG00000130726.11 TPM= 239.97 Transcript Type= protein_coding chr19 58551566 58555124 58551566 58555124 - ENST00000312547.6@CHMP2A ENST00000312547.6 protein_coding 58554988,58554045,58552259,58552055,58551906,58551566 58555124,58554236,58552438,58552185,58551967,58551776 Gene ID= ENSG00000130724.8 TPM= 104.59 Transcript Type= protein_coding chr19 58551566 58554973 58551566 58554973 - ENST00000601220.5@CHMP2A ENST00000601220.5 protein_coding 58554865,58554045,58552259,58552055,58551906,58551566 58554973,58554236,58552438,58552185,58551967,58551776 Gene ID= ENSG00000130724.8 TPM= 43.92 Transcript Type= protein_coding chr19 58555712 58558960 58555712 58558960 - ENST00000253023.7@UBE2M ENST00000253023.7 protein_coding 58558273,58557063,58556892,58556687,58556316,58555712 58558960,58557157,58556930,58556790,58556379,58556229 Gene ID= ENSG00000130725.7 TPM= 164.81 Transcript Type= protein_coding chr19 58561916 58573573 58561916 58573573 - transcript6810.chr19.nic@MZF1 transcript6810.chr19.nic protein_coding 58573055,58572550,58570994,58570344,58569516,58569277,58561916 58573573,58572719,58571429,58570527,58569586,58569397,58563504 Gene ID= ENSG00000099326.8 TPM= 7.05 Transcript Type= NA chr19 58561916 58573072 58561916 58573072 - transcript6814.chr19.nnic@MZF1 transcript6814.chr19.nnic protein_coding 58572762,58570994,58570344,58569516,58569277,58561916 58573072,58571429,58570527,58569586,58569397,58563504 Gene ID= ENSG00000099326.8 TPM= 3.42 Transcript Type= NA chr19 58561916 58573536 58561916 58573536 - transcript6818.chr19.nnic@MZF1 transcript6818.chr19.nnic protein_coding 58573055,58571162,58570344,58569516,58569277,58561916 58573536,58571429,58570527,58569586,58569397,58563504 Gene ID= ENSG00000099326.8 TPM= 4.33 Transcript Type= NA chr19 58561916 58573573 58561916 58573573 - transcript6820.chr19.nnic@MZF1 transcript6820.chr19.nnic protein_coding 58573373,58570994,58570344,58569516,58569277,58561916 58573573,58571429,58570527,58569586,58569415,58563504 Gene ID= ENSG00000099326.8 TPM= 2.34 Transcript Type= NA chr19 58561933 58573575 58561933 58573575 - ENST00000215057.6@MZF1 ENST00000215057.6 protein_coding 58573055,58570994,58570344,58569516,58569277,58561933 58573575,58571429,58570527,58569586,58569397,58563504 Gene ID= ENSG00000099326.8 TPM= 23.12 Transcript Type= protein_coding chr19 58561933 58573575 58561933 58573575 - ENST00000599369.5@MZF1 ENST00000599369.5 protein_coding 58573373,58570994,58570344,58569516,58569277,58561933 58573575,58571429,58570527,58569586,58569397,58563504 Gene ID= ENSG00000099326.8 TPM= 10.44 Transcript Type= protein_coding chr19 58575452 58589480 58575452 58589480 + transcript6834.chr19.nic@CENPBD1P1 transcript6834.chr19.nic transcribed_processed_pseudogene 58575452,58586155,58589066 58575588,58586356,58589480 Gene ID= ENSG00000213753.10 TPM= 1.81 Transcript Type= NA chr19 58575460 58584397 58575460 58584397 + ENST00000493504.1@CENPBD1P1 ENST00000493504.1 transcribed_processed_pseudogene 58575460,58581245 58575588,58584397 Gene ID= ENSG00000213753.10 TPM= 23.54 Transcript Type= processed_transcript chr20 270863 290460 270863 290460 - transcript3.chr20.nic@C20orf96 transcript3.chr20.nic protein_coding 290259,289559,283963,279172,278330,277226,277044,276793,275968,270863 290460,289676,284081,279330,278429,277383,277145,276879,276086,271267 Gene ID= ENSG00000196476.11 TPM= 2.72 Transcript Type= NA chr20 270863 290460 270863 290460 - transcript8.chr20.nic@C20orf96 transcript8.chr20.nic protein_coding 290259,289559,283963,279172,278330,277226,275968,270863 290460,289676,284081,279330,278429,277383,277145,271267 Gene ID= ENSG00000196476.11 TPM= 1.81 Transcript Type= NA chr20 346799 354867 346799 354867 + transcript23.chr20.nic@NRSN2 transcript23.chr20.nic protein_coding 346799,349249,349638,353210 346897,349363,349832,354867 Gene ID= ENSG00000125841.12 TPM= 8.45 Transcript Type= NA chr20 347024 354868 347024 354868 + ENST00000382291.7@NRSN2 ENST00000382291.7 protein_coding 347024,349249,349638,353210 347142,349363,349832,354868 Gene ID= ENSG00000125841.12 TPM= 65.5 Transcript Type= protein_coding chr20 347917 354867 347917 354867 + transcript25.chr20.nnic@NRSN2 transcript25.chr20.nnic protein_coding 347917,349249,349638,353210 348063,349363,349832,354867 Gene ID= ENSG00000125841.12 TPM= 9.35 Transcript Type= NA chr20 380617 397559 380617 397559 + ENST00000217233.7@TRIB3 ENST00000217233.7 protein_coding 380617,388011,391287,396198 381169,388301,391579,397559 Gene ID= ENSG00000101255.10 TPM= 56.14 Transcript Type= protein_coding chr20 408012 430968 408012 430968 + transcript51.chr20.nic@RBCK1 transcript51.chr20.nic protein_coding 408012,409881,417526,417732,419347,419558,420871,427313,428491,428951,430350 408779,410025,417619,417930,419468,419731,422238,427492,428589,429094,430968 Gene ID= ENSG00000125826.20 TPM= 6.6 Transcript Type= NA chr20 408053 430966 408053 430966 + ENST00000356286.9@RBCK1 ENST00000356286.9 protein_coding 408053,409881,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350 408779,410025,417619,417930,419468,419731,421031,422238,427492,428589,429094,430966 Gene ID= ENSG00000125826.20 TPM= 230.72 Transcript Type= protein_coding chr20 408050 430966 408050 430966 + ENST00000382214.7@RBCK1 ENST00000382214.7 protein_coding 408050,409881,417526,417732,419347,419558,420871,422127,427313,428491,428951,430350 408779,410025,417619,417930,419468,419731,421006,422238,427492,428589,429094,430966 Gene ID= ENSG00000125826.20 TPM= 3.88 Transcript Type= nonsense_mediated_decay chr20 408078 410764 408078 410764 + ENST00000475269.5@RBCK1 ENST00000475269.5 protein_coding 408078,409881,410412 408779,410025,410764 Gene ID= ENSG00000125826.20 TPM= 35.32 Transcript Type= protein_coding chr20 408305 410764 408305 410764 + ENST00000400245.3@RBCK1 ENST00000400245.3 protein_coding 408305,409830,410412 408779,410025,410764 Gene ID= ENSG00000125826.20 TPM= 3.62 Transcript Type= processed_transcript chr20 408343 410764 408343 410764 + ENST00000400247.3@RBCK1 ENST00000400247.3 protein_coding 408343,410412 408779,410764 Gene ID= ENSG00000125826.20 TPM= 1.81 Transcript Type= protein_coding chr20 436281 462563 436281 462563 - transcript62.chr20.nic@TBC1D20 transcript62.chr20.nic protein_coding 462336,447889,445050,441857,441588,440248,439108,438550,436281 462563,448074,445130,442043,441689,440389,439295,438841,437598 Gene ID= ENSG00000125875.13 TPM= 10.87 Transcript Type= NA chr20 435480 462553 435480 462553 - ENST00000354200.4@TBC1D20 ENST00000354200.4 protein_coding 462336,447889,445050,441857,441588,440248,439108,435480 462553,448074,445130,442043,441689,440389,439295,438841 Gene ID= ENSG00000125875.13 TPM= 61.58 Transcript Type= protein_coding chr20 435480 462531 435480 462531 - ENST00000461304.5@TBC1D20 ENST00000461304.5 protein_coding 462336,447889,445050,441857,441588,440248,439108,438550,437440,435480 462531,448074,445130,442043,441689,440389,439295,438841,437598,435970 Gene ID= ENSG00000125875.13 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr20 472500 543810 472500 543810 - transcript69.chr20.nnic@CSNK2A1 transcript69.chr20.nnic protein_coding 543672,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,483928,472500 543810,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076,473950 Gene ID= ENSG00000101266.17 TPM= 3.17 Transcript Type= NA chr20 481097 543821 481097 543821 - ENST00000217244.7@CSNK2A1 ENST00000217244.7 protein_coding 543672,527933,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097 543821,528049,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076 Gene ID= ENSG00000101266.17 TPM= 7.7 Transcript Type= protein_coding chr20 481097 543821 481097 543821 - ENST00000349736.9@CSNK2A1 ENST00000349736.9 protein_coding 543672,508451,505118,499833,499255,497721,495719,492254,489780,488678,487427,486376,481097 543821,508660,505229,499934,499305,497780,495802,492364,489881,488778,487575,486462,484076 Gene ID= ENSG00000101266.17 TPM= 54.33 Transcript Type= protein_coding chr20 603797 610398 603797 610398 - ENST00000246080.3@TCF15 ENST00000246080.3 protein_coding 609713,603797 610398,604665 Gene ID= ENSG00000125878.6 TPM= 6.34 Transcript Type= protein_coding chr20 646615 653370 646615 653370 - ENST00000381962.3@SRXN1 ENST00000381962.3 protein_coding 652976,646615 653370,648917 Gene ID= ENSG00000271303.1 TPM= 295.21 Transcript Type= protein_coding chr20 833715 846279 833715 846279 + ENST00000381941.7@FAM110A ENST00000381941.7 protein_coding 833715,844708 833951,846279 Gene ID= ENSG00000125898.12 TPM= 13.13 Transcript Type= protein_coding chr20 833777 846279 833777 846279 + ENST00000304189.6@FAM110A ENST00000304189.6 protein_coding 833777,839455,844708 833951,839563,846279 Gene ID= ENSG00000125898.12 TPM= 3.17 Transcript Type= protein_coding chr20 1118598 1168378 1118598 1168378 + ENST00000335877.10@PSMF1 ENST00000335877.10 protein_coding 1118598,1125498,1127426,1135121,1163130,1164318,1165029 1118902,1125650,1127508,1135306,1163183,1164476,1168378 Gene ID= ENSG00000125818.17 TPM= 138.55 Transcript Type= protein_coding chr20 1118598 1167328 1118598 1167328 + ENST00000246015.8@PSMF1 ENST00000246015.8 protein_coding 1118598,1125498,1127426,1135121,1163130,1164318,1166227 1118902,1125650,1127508,1135306,1163183,1164476,1167328 Gene ID= ENSG00000125818.17 TPM= 44.37 Transcript Type= protein_coding chr20 1266316 1309328 1266316 1309328 + ENST00000381873.7@SNPH ENST00000381873.7 protein_coding 1266316,1266654,1296325,1297145,1300562,1304878 1266397,1266760,1296421,1297252,1300711,1309328 Gene ID= ENSG00000101298.13 TPM= 11.77 Transcript Type= protein_coding chr20 1368978 1393162 1368978 1393162 - ENST00000400137.8@FKBP1A ENST00000400137.8 protein_coding 1392962,1392834,1375491,1372076,1368978 1393162,1392881,1375603,1372240,1370072 Gene ID= ENSG00000088832.16 TPM= 347.73 Transcript Type= protein_coding chr20 1442162 1467692 1442162 1467692 - ENST00000216879.8@NSFL1C ENST00000216879.8 protein_coding 1466720,1464329,1458200,1454967,1454213,1453031,1452493,1445666,1442162 1467692,1464426,1458274,1455132,1454305,1453140,1452630,1445830,1443911 Gene ID= ENSG00000088833.17 TPM= 114.64 Transcript Type= protein_coding chr20 1442162 1466905 1442162 1466905 - ENST00000555944.5@NSFL1C ENST00000555944.5 protein_coding 1466720,1458200,1454967,1454213,1453031,1452493,1445666,1442162 1466905,1458274,1455037,1454305,1453140,1452630,1445830,1443911 Gene ID= ENSG00000088833.17 TPM= 2.35 Transcript Type= nonsense_mediated_decay chr20 1894167 1939894 1894167 1939894 + ENST00000400068.7@SIRPA ENST00000400068.7 protein_coding 1894167,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320 1894517,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939894 Gene ID= ENSG00000198053.11 TPM= 37.43 Transcript Type= protein_coding chr20 1894895 1940590 1894895 1940590 + transcript130.chr20.nnic@SIRPA transcript130.chr20.nnic protein_coding 1894895,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320 1894966,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1940590 Gene ID= ENSG00000198053.11 TPM= 15.69 Transcript Type= NA chr20 1894783 1939897 1894783 1939897 + ENST00000356025.7@SIRPA ENST00000356025.7 protein_coding 1894783,1895439,1915099,1921395,1922313,1924764,1927875,1934715,1937320 1894796,1895526,1915455,1921712,1922645,1924877,1927899,1934754,1939897 Gene ID= ENSG00000198053.11 TPM= 10.26 Transcript Type= protein_coding chr20 2101611 2148555 2101611 2148555 + ENST00000381482.7@STK35 ENST00000381482.7 protein_coding 2101611,2102768,2116666,2143784 2102175,2103365,2117415,2148555 Gene ID= ENSG00000125834.12 TPM= 31.69 Transcript Type= protein_coding chr20 2461634 2470792 2461634 2470792 - transcript143.chr20.nic@SNRPB transcript143.chr20.nic protein_coding 2470688,2467607,2467192,2465708,2463747,2463089,2462636,2461634 2470792,2467758,2467315,2465819,2463899,2463227,2462761,2461939 Gene ID= ENSG00000125835.18 TPM= 6.79 Transcript Type= NA chr20 2461634 2470853 2461634 2470853 - ENST00000381342.6@SNRPB ENST00000381342.6 protein_coding 2470688,2467607,2465708,2463747,2463089,2462636,2461634 2470853,2467758,2465819,2463899,2463227,2462761,2461939 Gene ID= ENSG00000125835.18 TPM= 108.67 Transcript Type= protein_coding chr20 2461634 2470853 2461634 2470853 - ENST00000438552.6@SNRPB ENST00000438552.6 protein_coding 2470688,2467607,2465708,2463747,2463089,2462636,2461634 2470853,2467758,2465819,2463899,2463227,2462761,2461793 Gene ID= ENSG00000125835.18 TPM= 34.86 Transcript Type= protein_coding chr20 2461660 2470732 2461660 2470732 - ENST00000474384.2@SNRPB ENST00000474384.2 protein_coding 2470688,2467607,2467192,2465708,2463747,2463089,2462636,2461660 2470732,2467758,2467315,2465819,2463899,2463227,2462761,2461793 Gene ID= ENSG00000125835.18 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr20 2481817 2509132 2481817 2509132 - ENST00000278772.8@ZNF343 ENST00000278772.8 protein_coding 2508881,2500656,2493778,2493519,2492699,2481817 2509132,2500742,2494044,2493577,2492825,2484656 Gene ID= ENSG00000088876.11 TPM= 8.15 Transcript Type= protein_coding chr20 2652145 2658393 2652145 2658393 + ENST00000329276.9@NOP56 ENST00000329276.9 protein_coding 2652145,2652842,2653279,2654414,2654749,2655325,2655595,2655934,2656401,2656774,2657081,2657929 2652663,2652931,2653393,2654575,2654947,2655512,2655746,2656034,2656549,2656895,2657218,2658393 Gene ID= ENSG00000101361.16 TPM= 53.43 Transcript Type= protein_coding chr20 2658394 2664219 2658394 2664219 - transcript168.chr20.nnic@IDH3B transcript168.chr20.nnic protein_coding 2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658686,2658394 2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522 Gene ID= ENSG00000101365.20 TPM= 13.98 Transcript Type= NA chr20 2658396 2664219 2658396 2664219 - transcript171.chr20.nnic@IDH3B transcript171.chr20.nnic protein_coding 2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658627,2658396 2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522 Gene ID= ENSG00000101365.20 TPM= 8.55 Transcript Type= NA chr20 2658397 2664219 2658397 2664219 - transcript173.chr20.nic@IDH3B transcript173.chr20.nic protein_coding 2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660068,2659699,2659525,2658638,2658397 2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522 Gene ID= ENSG00000101365.20 TPM= 8.1 Transcript Type= NA chr20 2658395 2664219 2658395 2664219 - ENST00000380843.8@IDH3B ENST00000380843.8 protein_coding 2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658395 2664219,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837 Gene ID= ENSG00000101365.20 TPM= 83.93 Transcript Type= protein_coding chr20 2658395 2664189 2658395 2664189 - ENST00000474315.5@IDH3B ENST00000474315.5 protein_coding 2664153,2663925,2663660,2663446,2660909,2660697,2660457,2660263,2660030,2659699,2659525,2658759,2658395 2664189,2664005,2663758,2663566,2660969,2660829,2660590,2660365,2660176,2659793,2659585,2658837,2658522 Gene ID= ENSG00000101365.20 TPM= 48.39 Transcript Type= protein_coding chr20 2755088 2760101 2755088 2760101 + ENST00000477287.1@EBF4 ENST00000477287.1 protein_coding 2755088,2758909,2759268 2755824,2758984,2760101 Gene ID= ENSG00000088881.20 TPM= 1.81 Transcript Type= processed_transcript chr20 2794069 2800637 2794069 2800637 - ENST00000380605.2@CPXM1 ENST00000380605.2 protein_coding 2800401,2798726,2798428,2798152,2797968,2797192,2797006,2796527,2796247,2795982,2795599,2795277,2794537,2794069 2800637,2798893,2798537,2798291,2798058,2797342,2797094,2796650,2796443,2796161,2795896,2795416,2794639,2794431 Gene ID= ENSG00000088882.7 TPM= 42.56 Transcript Type= protein_coding chr20 2835317 2840702 2835317 2840702 - transcript224.chr20.nnic@PCED1A transcript224.chr20.nnic protein_coding 2840211,2839789,2839192,2838844,2838596,2838232,2836039,2835317 2840702,2839933,2839271,2839037,2838746,2838478,2836314,2835709 Gene ID= ENSG00000132635.16 TPM= 4.57 Transcript Type= NA chr20 2835317 2841182 2835317 2841182 - transcript227.chr20.nic@PCED1A transcript227.chr20.nic protein_coding 2840866,2839789,2839192,2838844,2838596,2838232,2836039,2835317 2841182,2839933,2839271,2839082,2838746,2838478,2836314,2835709 Gene ID= ENSG00000132635.16 TPM= 10.01 Transcript Type= NA chr20 2835317 2840691 2835317 2840691 - transcript228.chr20.nic@PCED1A transcript228.chr20.nic protein_coding 2839789,2839192,2838844,2838596,2838232,2836039,2835317 2840691,2839271,2839082,2838746,2838478,2836314,2835709 Gene ID= ENSG00000132635.16 TPM= 9.1 Transcript Type= NA chr20 2835317 2840702 2835317 2840702 - transcript233.chr20.nic@PCED1A transcript233.chr20.nic protein_coding 2840211,2839789,2839192,2838844,2838596,2838232,2835317 2840702,2839933,2839271,2839082,2838746,2838478,2835709 Gene ID= ENSG00000132635.16 TPM= 2.54 Transcript Type= NA chr20 2835314 2840692 2835314 2840692 - ENST00000360652.6@PCED1A ENST00000360652.6 protein_coding 2840211,2839789,2839192,2838844,2838596,2838232,2836039,2835314 2840692,2839933,2839271,2839082,2838746,2838478,2836314,2835709 Gene ID= ENSG00000132635.16 TPM= 57.09 Transcript Type= protein_coding chr20 2840713 2866731 2840713 2866731 + transcript206.chr20.nic@VPS16 transcript206.chr20.nic protein_coding 2840713,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430 2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866731 Gene ID= ENSG00000215305.9 TPM= 4.98 Transcript Type= NA chr20 2840703 2866732 2840703 2866732 + ENST00000380445.7@VPS16 ENST00000380445.7 protein_coding 2840703,2859719,2860054,2860239,2860449,2860748,2860970,2861225,2861615,2861805,2862054,2862579,2862807,2863065,2863290,2863949,2864179,2864365,2864547,2864978,2865148,2865399,2866212,2866430 2840827,2859807,2860151,2860367,2860593,2860863,2861092,2861280,2861704,2861899,2862130,2862710,2862934,2863100,2863398,2864083,2864287,2864462,2864654,2865055,2865317,2865495,2866315,2866732 Gene ID= ENSG00000215305.9 TPM= 110.02 Transcript Type= protein_coding chr20 2873454 3038671 2873454 3038671 + transcript252.chr20.nnic@PTPRA transcript252.chr20.nnic protein_coding 2873454,2923207,2964272,2964861,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059 2873760,2923285,2964350,2965202,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038671 Gene ID= ENSG00000132670.20 TPM= 24.97 Transcript Type= NA chr20 2873454 3038671 2873454 3038671 + transcript258.chr20.nnic@PTPRA transcript258.chr20.nnic protein_coding 2873454,2923207,2947982,2964272,2964861,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059 2873760,2923285,2948024,2964350,2965202,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038671 Gene ID= ENSG00000132670.20 TPM= 6.11 Transcript Type= NA chr20 2873496 3038668 2873496 3038668 + ENST00000399903.6@PTPRA ENST00000399903.6 protein_coding 2873496,2923207,2947982,2964272,2964861,2975215,2986765,2988032,2988338,3005056,3007344,3015849,3017816,3021309,3022054,3022689,3024472,3026687,3027121,3027707,3035585,3035790,3037154,3038059 2873760,2923285,2948024,2964350,2965202,2975241,2986849,2988105,2988474,3005146,3007420,3015885,3017913,3021428,3022220,3022824,3024621,3026780,3027197,3027841,3035710,3035941,3037289,3038668 Gene ID= ENSG00000132670.20 TPM= 7.32 Transcript Type= protein_coding chr20 3046031 3048249 3046031 3048249 + transcript264.chr20.nnic@MRPS26 transcript264.chr20.nnic protein_coding 3046031,3046373,3046614,3047735 3046280,3046519,3046900,3048249 Gene ID= ENSG00000125901.5 TPM= 3.62 Transcript Type= NA chr20 3082556 3084724 3082556 3084724 - ENST00000380293.3@AVP ENST00000380293.3 protein_coding 3084555,3082977,3082556 3084724,3083178,3082802 Gene ID= ENSG00000101200.5 TPM= 1.81 Transcript Type= protein_coding chr20 3107573 3160196 3107573 3160196 - ENST00000217173.6@UBOX5 ENST00000217173.6 protein_coding 3159766,3123312,3121384,3115305,3107573 3160196,3123406,3122584,3115466,3110314 Gene ID= ENSG00000185019.16 TPM= 13.58 Transcript Type= protein_coding chr20 3107573 3160196 3107573 3160196 - ENST00000348031.6@UBOX5 ENST00000348031.6 protein_coding 3159766,3123312,3121384,3107573 3160196,3123406,3122584,3110314 Gene ID= ENSG00000185019.16 TPM= 1.81 Transcript Type= protein_coding chr20 3146519 3159897 3146519 3159897 - ENST00000380266.3@FASTKD5 ENST00000380266.3 protein_coding 3159766,3146519 3159897,3149260 Gene ID= ENSG00000215251.3 TPM= 63.39 Transcript Type= protein_coding chr20 3162618 3173613 3162618 3173613 - transcript276.chr20.nnic@LZTS3 transcript276.chr20.nnic protein_coding 3173455,3167799,3166705,3165497,3162618 3173613,3167961,3167181,3166360,3165152 Gene ID= ENSG00000088899.14 TPM= 4.53 Transcript Type= NA chr20 3162618 3173594 3162618 3173594 - transcript281.chr20.nnic@LZTS3 transcript281.chr20.nnic protein_coding 3173455,3166705,3165497,3162618 3173594,3167181,3166360,3165152 Gene ID= ENSG00000088899.14 TPM= 5.43 Transcript Type= NA chr20 3162618 3173592 3162618 3173592 - ENST00000337576.6@LZTS3 ENST00000337576.6 protein_coding 3173455,3167738,3166705,3165497,3162618 3173592,3167961,3167181,3166360,3165152 Gene ID= ENSG00000088899.14 TPM= 2.72 Transcript Type= protein_coding chr20 3190350 3204685 3190350 3204685 - ENST00000354488.7@DDRGK1 ENST00000354488.7 protein_coding 3204537,3203213,3200342,3200001,3195231,3194830,3191765,3191190,3190350 3204685,3203416,3200454,3200102,3195353,3194868,3191821,3191238,3190819 Gene ID= ENSG00000198171.12 TPM= 261.7 Transcript Type= protein_coding chr20 3209360 3223870 3209360 3223870 + ENST00000380113.7@ITPA ENST00000380113.7 protein_coding 3209360,3213169,3213319,3213985,3215281,3218517,3221841,3223366 3209617,3213226,3213383,3214058,3215312,3218632,3221917,3223870 Gene ID= ENSG00000125877.12 TPM= 42.56 Transcript Type= protein_coding chr20 3209513 3223870 3209513 3223870 + ENST00000460550.5@ITPA ENST00000460550.5 protein_coding 3209513,3213169,3213985,3215281,3218517,3221841,3223366 3209617,3213226,3214058,3215312,3218632,3221917,3223870 Gene ID= ENSG00000125877.12 TPM= 4.53 Transcript Type= processed_transcript chr20 3227412 3239609 3227412 3239609 - transcript296.chr20.nnic@SLC4A11 transcript296.chr20.nnic protein_coding 3239348,3237544,3234742,3234568,3234083,3233921,3233514,3231330,3231149,3230933,3230732,3230515,3230187,3229524,3229346,3229095,3228838,3228512,3228259,3227412 3239609,3237588,3234894,3234617,3234314,3234002,3233637,3231548,3231242,3231058,3230845,3230647,3230260,3229776,3229452,3229263,3229011,3228707,3228428,3227856 Gene ID= ENSG00000088836.12 TPM= 8.6 Transcript Type= NA chr20 3227412 3238637 3227412 3238637 - transcript299.chr20.nnic@SLC4A11 transcript299.chr20.nnic protein_coding 3237544,3234742,3234568,3234083,3233921,3233514,3231330,3231149,3230933,3230732,3230515,3230187,3229524,3229346,3229095,3228838,3228512,3228259,3227412 3238637,3234894,3234617,3234314,3234002,3233637,3231548,3231242,3231058,3230845,3230647,3230260,3229776,3229452,3229213,3229011,3228707,3228428,3227856 Gene ID= ENSG00000088836.12 TPM= 3.17 Transcript Type= NA chr20 3249304 3407577 3249304 3407577 - transcript310.chr20.nnic@C20orf194 transcript310.chr20.nnic protein_coding 3407475,3382427,3381379,3376178,3375030,3374048,3359516,3348525,3343676,3340504,3332280,3330646,3326197,3324892,3322652,3322217,3316723,3315735,3315033,3304440,3298029,3296861,3294528,3294139,3290129,3287632,3281641,3278912,3270427,3264438,3259922,3259480,3256006,3255219,3253726,3249304 3407577,3382506,3381498,3376302,3375126,3374154,3359593,3348623,3343731,3340639,3332361,3330682,3326284,3324968,3322696,3322262,3316793,3315785,3315120,3304543,3298175,3296949,3294629,3294256,3290217,3287790,3281766,3278949,3270562,3264524,3260028,3259554,3256211,3255284,3253819,3252684 Gene ID= ENSG00000088854.12 TPM= 1.81 Transcript Type= NA chr20 3262993 3407627 3262993 3407627 - transcript311.chr20.nnic@C20orf194 transcript311.chr20.nnic protein_coding 3407475,3382427,3381379,3376178,3375030,3374048,3359516,3348525,3340504,3332280,3330646,3326197,3324892,3322652,3322217,3318289,3316723,3315735,3315033,3304440,3298029,3296861,3294528,3294139,3290129,3287632,3281641,3278912,3270427,3262993 3407627,3382506,3381498,3376302,3375126,3374154,3359593,3348623,3340639,3332361,3330682,3326284,3324968,3322696,3322262,3318400,3316793,3315785,3315120,3304543,3298175,3296949,3294629,3294256,3290217,3287790,3281766,3278949,3270562,3264524 Gene ID= ENSG00000088854.12 TPM= 1.81 Transcript Type= NA chr20 3249305 3407625 3249305 3407625 - ENST00000252032.9@C20orf194 ENST00000252032.9 protein_coding 3407475,3382427,3381379,3376178,3375030,3374048,3359516,3348525,3343676,3340504,3332280,3330646,3326197,3324892,3322652,3322217,3318289,3316723,3315735,3315033,3304440,3298029,3296861,3294528,3294139,3290129,3287632,3281641,3278912,3270427,3264438,3259922,3259480,3256006,3255219,3253726,3249305 3407625,3382506,3381498,3376302,3375126,3374154,3359593,3348623,3343731,3340639,3332361,3330682,3326284,3324968,3322696,3322262,3318400,3316793,3315785,3315120,3304543,3298175,3296949,3294629,3294256,3290217,3287790,3281766,3278949,3270562,3264524,3260028,3259554,3256211,3255284,3253819,3252684 Gene ID= ENSG00000088854.12 TPM= 9.96 Transcript Type= protein_coding chr20 3686972 3712634 3686972 3712634 - transcript321.chr20.nnic@SIGLEC1 transcript321.chr20.nnic protein_coding 3712438,3707080,3706347,3705744,3703825,3703197,3701342,3699202,3697798,3697085,3696586,3694663,3694221,3693447,3692862,3692521,3691903,3691340,3689962,3689600,3689155,3686972 3712634,3707234,3706706,3706040,3704091,3703451,3701641,3699459,3698133,3697342,3696888,3694923,3694532,3693698,3693131,3692772,3692202,3691600,3690264,3689702,3689227,3688619 Gene ID= ENSG00000088827.12 TPM= 21.73 Transcript Type= NA chr20 3732705 3753109 3732705 3753109 + transcript332.chr20.nnic@HSPA12B transcript332.chr20.nnic protein_coding 3732705,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749508,3749969,3750804,3751511 3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753109 Gene ID= ENSG00000132622.10 TPM= 1.81 Transcript Type= NA chr20 3732667 3753111 3732667 3753111 + ENST00000254963.6@HSPA12B ENST00000254963.6 protein_coding 3732667,3738658,3740815,3742284,3744902,3745493,3745915,3748217,3749232,3749750,3749969,3750804,3751511 3732794,3738717,3740912,3742408,3745088,3745597,3746031,3748391,3749318,3749854,3750227,3750907,3753111 Gene ID= ENSG00000132622.10 TPM= 24.45 Transcript Type= protein_coding chr20 3753508 3768387 3753508 3768387 - ENST00000379772.3@C20orf27 ENST00000379772.3 protein_coding 3767663,3760082,3758536,3755469,3754397,3753508 3768387,3760186,3758678,3755607,3754519,3754158 Gene ID= ENSG00000101220.17 TPM= 42.56 Transcript Type= protein_coding chr20 3753508 3767802 3753508 3767802 - transcript337.chr20.nic@C20orf27 transcript337.chr20.nic protein_coding 3767663,3758536,3755469,3754397,3753508 3767802,3760186,3755607,3754519,3754158 Gene ID= ENSG00000101220.17 TPM= 1.81 Transcript Type= NA chr20 3777504 3781448 3777504 3781448 - ENST00000379756.3@SPEF1 ENST00000379756.3 protein_coding 3781179,3779664,3779196,3778951,3778746,3778421,3777504 3781448,3779775,3779352,3778990,3778806,3778544,3778319 Gene ID= ENSG00000101222.12 TPM= 1.81 Transcript Type= protein_coding chr20 3786772 3806121 3786772 3806121 + ENST00000344256.10@CDC25B ENST00000344256.10 protein_coding 3786772,3797622,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821 3787139,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806121 Gene ID= ENSG00000101224.17 TPM= 5.89 Transcript Type= protein_coding chr20 3795835 3806118 3795835 3806118 + ENST00000245960.9@CDC25B ENST00000245960.9 protein_coding 3795835,3797622,3798412,3800288,3800462,3800743,3800971,3801254,3801722,3801924,3802281,3802910,3803108,3803404,3804569,3804821 3796731,3797749,3798463,3800329,3800498,3800865,3801093,3801388,3801802,3802100,3802376,3802972,3803206,3803537,3804680,3806118 Gene ID= ENSG00000101224.17 TPM= 9.51 Transcript Type= protein_coding chr20 3820524 3825307 3820524 3825307 + ENST00000246041.6@AP5S1 ENST00000246041.6 protein_coding 3820524,3822102,3823871 3820854,3822293,3825307 Gene ID= ENSG00000125843.10 TPM= 5.89 Transcript Type= protein_coding chr20 3820536 3825302 3820536 3825302 + ENST00000379567.6@AP5S1 ENST00000379567.6 protein_coding 3820536,3822102,3823871 3820702,3822293,3825302 Gene ID= ENSG00000125843.10 TPM= 7.7 Transcript Type= protein_coding chr20 3888801 3923700 3888801 3923700 + transcript362.chr20.nic@PANK2 transcript362.chr20.nic protein_coding 3888801,3907926,3910577,3912458,3916927,3918671,3923244 3888904,3908135,3910830,3912634,3917050,3918796,3923700 Gene ID= ENSG00000125779.21 TPM= 1.81 Transcript Type= NA chr20 3889389 3923855 3889389 3923855 + ENST00000336066.7@PANK2 ENST00000336066.7 protein_coding 3889389,3907926,3910577,3912458,3916927,3918671,3923244 3889728,3908135,3910830,3912634,3917050,3918796,3923855 Gene ID= ENSG00000125779.21 TPM= 22.64 Transcript Type= nonsense_mediated_decay chr20 3933090 4015590 3933090 4015590 - transcript369.chr20.nnic@RNF24 transcript369.chr20.nnic protein_coding 4015437,3963875,3948237,3945177,3934994,3934852,3933090 4015590,3964024,3948279,3945218,3935073,3934920,3934201 Gene ID= ENSG00000101236.16 TPM= 1.81 Transcript Type= NA chr20 4148779 4187747 4148779 4187747 + ENST00000339123.10@SMOX ENST00000339123.10 protein_coding 4148779,4175030,4177351,4181803,4182089,4182483,4183494,4187270 4148977,4175263,4177577,4181976,4182323,4182848,4183654,4187747 Gene ID= ENSG00000088826.17 TPM= 1.13 Transcript Type= protein_coding chr20 4148779 4187746 4148779 4187746 + ENST00000621355.4@SMOX ENST00000621355.4 protein_coding 4148779,4175030,4177351,4181803,4182089,4183494,4186743,4187270 4148977,4175263,4177577,4181976,4182848,4183654,4186832,4187746 Gene ID= ENSG00000088826.17 TPM= 1.13 Transcript Type= protein_coding chr20 4148779 4187747 4148779 4187747 + ENST00000305958.8@SMOX ENST00000305958.8 protein_coding 4148779,4175030,4177351,4181803,4182089,4183494,4187270 4148977,4175263,4177577,4181976,4182848,4183654,4187747 Gene ID= ENSG00000088826.17 TPM= 8.38 Transcript Type= protein_coding chr20 4148775 4187738 4148775 4187738 + transcript379.chr20.nic@SMOX transcript379.chr20.nic protein_coding 4148775,4175030,4177351,4181803,4183494,4187270 4148977,4175263,4177577,4182848,4183654,4187738 Gene ID= ENSG00000088826.17 TPM= 3.85 Transcript Type= NA chr20 4686236 4701590 4686236 4701590 + ENST00000379440.8@PRNP ENST00000379440.8 protein_coding 4686236,4699211 4686512,4701590 Gene ID= ENSG00000171867.16 TPM= 176.58 Transcript Type= protein_coding chr20 4780024 4823494 4780024 4823494 - transcript385.chr20.nnic@RASSF2 transcript385.chr20.nnic protein_coding 4823315,4822329,4800972,4798010,4795815,4792539,4790451,4789596,4788217,4787633,4786231,4780024 4823494,4822403,4801062,4798085,4795966,4792627,4790611,4789697,4788268,4787754,4786328,4784342 Gene ID= ENSG00000101265.15 TPM= 10.87 Transcript Type= NA chr20 4780023 4823645 4780023 4823645 - ENST00000379400.7@RASSF2 ENST00000379400.7 protein_coding 4823557,4822329,4800972,4798010,4795815,4792539,4790451,4789596,4788217,4787633,4786231,4780023 4823645,4822403,4801062,4798085,4795966,4792627,4790611,4789697,4788268,4787754,4786328,4784342 Gene ID= ENSG00000101265.15 TPM= 6.34 Transcript Type= protein_coding chr20 4852357 4937026 4852357 4937026 - transcript391.chr20.nnic@SLC23A2 transcript391.chr20.nnic protein_coding 4936835,4932455,4912880,4902442,4899555,4885821,4884753,4883642,4874576,4873936,4869906,4867770,4862778,4861948,4859289,4852357 4937026,4932716,4912978,4902558,4899712,4885909,4884823,4883823,4874696,4874092,4870053,4867875,4862907,4862085,4859384,4857204 Gene ID= ENSG00000089057.14 TPM= 27.47 Transcript Type= NA chr20 4852357 5001502 4852357 5001502 - transcript393.chr20.nnic@SLC23A2 transcript393.chr20.nnic protein_coding 5001406,4932455,4912880,4902442,4899555,4885821,4884753,4883642,4874576,4873936,4869906,4867770,4862778,4861948,4859289,4852357 5001502,4932716,4912978,4902558,4899712,4885909,4884823,4883823,4874696,4874092,4870053,4867875,4862907,4862085,4859384,4857204 Gene ID= ENSG00000089057.14 TPM= 22.03 Transcript Type= NA chr20 4852356 5001499 4852356 5001499 - ENST00000338244.5@SLC23A2 ENST00000338244.5 protein_coding 5001406,4970793,4932455,4912880,4902442,4899555,4885821,4884753,4883642,4874576,4873936,4869906,4867770,4862778,4861948,4859289,4852356 5001499,4970919,4932716,4912978,4902558,4899712,4885909,4884823,4883823,4874696,4874092,4870053,4867875,4862907,4862085,4859384,4857204 Gene ID= ENSG00000089057.14 TPM= 40.14 Transcript Type= protein_coding chr20 5099840 5113103 5099840 5113103 - ENST00000202834.11@TMEM230 ENST00000202834.11 protein_coding 5112961,5109332,5106188,5099840 5113103,5109445,5106310,5100931 Gene ID= ENSG00000089063.14 TPM= 188.83 Transcript Type= protein_coding chr20 5099840 5113042 5099840 5113042 - ENST00000379299.6@TMEM230 ENST00000379299.6 protein_coding 5112730,5109332,5106188,5099840 5113042,5109445,5106310,5100931 Gene ID= ENSG00000089063.14 TPM= 53.91 Transcript Type= protein_coding chr20 5099840 5113087 5099840 5113087 - ENST00000342308.9@TMEM230 ENST00000342308.9 protein_coding 5112961,5111500,5109332,5106188,5099840 5113087,5111605,5109445,5106310,5100931 Gene ID= ENSG00000089063.14 TPM= 5.91 Transcript Type= protein_coding chr20 5099840 5113049 5099840 5113049 - ENST00000379279.6@TMEM230 ENST00000379279.6 protein_coding 5112743,5109332,5106188,5099840 5113049,5109445,5106310,5100931 Gene ID= ENSG00000089063.14 TPM= 21.31 Transcript Type= protein_coding chr20 5099840 5113050 5099840 5113050 - ENST00000379283.6@TMEM230 ENST00000379283.6 protein_coding 5112720,5109332,5106188,5099840 5113050,5109445,5106310,5100931 Gene ID= ENSG00000089063.14 TPM= 8.63 Transcript Type= protein_coding chr20 5099840 5113042 5099840 5113042 - ENST00000379286.6@TMEM230 ENST00000379286.6 protein_coding 5112743,5111500,5109332,5106188,5099840 5113042,5111605,5109445,5106310,5100931 Gene ID= ENSG00000089063.14 TPM= 3.2 Transcript Type= protein_coding chr20 5114953 5120026 5114953 5120026 - ENST00000379143.9@PCNA ENST00000379143.9 protein_coding 5119578,5118769,5118610,5117470,5115449,5114953 5120026,5118866,5118677,5117664,5115572,5115362 Gene ID= ENSG00000132646.10 TPM= 24.45 Transcript Type= protein_coding chr20 5114953 5126626 5114953 5126626 - ENST00000379160.3@PCNA ENST00000379160.3 protein_coding 5126500,5119578,5118769,5118610,5117470,5115449,5114953 5126626,5119914,5118866,5118677,5117664,5115572,5115362 Gene ID= ENSG00000132646.10 TPM= 22.64 Transcript Type= protein_coding chr20 5126786 5197887 5126786 5197887 + ENST00000460006.5@CDS2 ENST00000460006.5 protein_coding 5126786,5173523,5175183,5176648,5178817,5182387,5183061,5184858,5185758,5186687,5189067,5189735,5190102 5127149,5173659,5175279,5176745,5178956,5182445,5183143,5184945,5185826,5186839,5189186,5189838,5197887 Gene ID= ENSG00000101290.13 TPM= 61.58 Transcript Type= protein_coding chr20 5127048 5192672 5127048 5192672 + transcript414.chr20.nnic@CDS2 transcript414.chr20.nnic protein_coding 5127048,5178817,5182387,5183061,5184858,5185758,5186687,5189067,5189735,5190102 5127149,5178956,5182445,5183143,5184945,5185826,5186839,5189186,5189838,5192672 Gene ID= ENSG00000101290.13 TPM= 9.06 Transcript Type= NA chr20 5496067 5504613 5496067 5504613 - ENST00000379053.4@LINC00654 ENST00000379053.4 lincRNA 5504298,5496067 5504613,5501863 Gene ID= ENSG00000205181.5 TPM= 8.15 Transcript Type= lincRNA chr20 5544440 5611059 5544440 5611059 - transcript425.chr20.nic@GPCPD1 transcript425.chr20.nic protein_coding 5610842,5604364,5598725,5593327,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544440 5611059,5604440,5598821,5593411,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850 Gene ID= ENSG00000125772.12 TPM= 12.38 Transcript Type= NA chr20 5557855 5611059 5557855 5611059 - transcript426.chr20.nic@GPCPD1 transcript426.chr20.nic protein_coding 5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557855 5611059,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105 Gene ID= ENSG00000125772.12 TPM= 3.62 Transcript Type= NA chr20 5544440 5611000 5544440 5611000 - transcript427.chr20.nnic@GPCPD1 transcript427.chr20.nnic protein_coding 5610842,5598725,5593327,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544440 5611000,5598821,5593411,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850 Gene ID= ENSG00000125772.12 TPM= 3.32 Transcript Type= NA chr20 5592123 5611059 5592123 5611059 - transcript428.chr20.nic@GPCPD1 transcript428.chr20.nic protein_coding 5610842,5604364,5598725,5592123 5611059,5604440,5598821,5593411 Gene ID= ENSG00000125772.12 TPM= 1.81 Transcript Type= NA chr20 5544404 5611026 5544404 5611026 - ENST00000379019.5@GPCPD1 ENST00000379019.5 protein_coding 5610842,5604364,5598725,5593327,5586194,5584281,5580008,5578380,5575816,5575413,5573915,5570147,5567483,5566733,5565017,5561465,5559940,5558684,5557945,5544404 5611026,5604440,5598821,5593411,5586269,5584322,5580131,5578611,5575978,5575545,5573969,5570239,5567560,5566772,5565078,5561530,5560076,5558819,5558105,5547850 Gene ID= ENSG00000125772.12 TPM= 23.25 Transcript Type= protein_coding chr20 5750397 5863912 5750397 5863912 + ENST00000303142.10@C20orf196 ENST00000303142.10 protein_coding 5750397,5772862,5863024 5750479,5773043,5863912 Gene ID= ENSG00000171984.14 TPM= 10.87 Transcript Type= protein_coding chr20 5911430 5925361 5911430 5925361 + ENST00000378961.8@CHGB ENST00000378961.8 protein_coding 5911430,5916326,5916826,5922335,5924972 5911682,5916372,5916919,5924100,5925361 Gene ID= ENSG00000089199.9 TPM= 370.37 Transcript Type= protein_coding chr20 5937833 5950536 5937833 5950536 - ENST00000203001.6@TRMT6 ENST00000203001.6 protein_coding 5950278,5946406,5944805,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833 5950536,5946533,5944914,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726 Gene ID= ENSG00000089195.14 TPM= 24.9 Transcript Type= protein_coding chr20 5937833 5950558 5937833 5950558 - ENST00000453074.6@TRMT6 ENST00000453074.6 protein_coding 5950278,5946406,5944162,5943948,5943559,5942428,5941951,5941243,5941053,5937833 5950558,5946533,5944253,5944031,5943683,5942786,5942036,5941345,5941139,5938726 Gene ID= ENSG00000089195.14 TPM= 2.26 Transcript Type= protein_coding chr20 6006114 6038037 6006114 6038037 + transcript454.chr20.nnic@CRLS1 transcript454.chr20.nnic protein_coding 6006114,6009775,6015361,6031285,6032012,6034464,6037074 6006614,6009912,6015490,6031370,6032080,6034555,6038037 Gene ID= ENSG00000088766.11 TPM= 8.38 Transcript Type= NA chr20 6006123 6038037 6006123 6038037 + transcript455.chr20.nnic@CRLS1 transcript455.chr20.nnic protein_coding 6006123,6009740,6015361,6031285,6032012,6034464,6037074 6006552,6009912,6015490,6031370,6032080,6034555,6038037 Gene ID= ENSG00000088766.11 TPM= 6.57 Transcript Type= NA chr20 6006090 6040053 6006090 6040053 + ENST00000378863.8@CRLS1 ENST00000378863.8 protein_coding 6006090,6009775,6015361,6031285,6032012,6034464,6037074 6006552,6009912,6015490,6031370,6032080,6034555,6040053 Gene ID= ENSG00000088766.11 TPM= 154.17 Transcript Type= protein_coding chr20 6074845 6123544 6074845 6123544 - ENST00000217289.8@FERMT1 ENST00000217289.8 protein_coding 6122774,6119404,6115811,6112477,6110298,6107532,6097524,6096902,6094939,6088965,6087777,6085066,6084040,6079436,6074845 6123544,6119572,6116044,6112623,6110511,6107634,6097631,6097033,6094988,6089089,6087883,6085287,6084164,6079577,6077346 Gene ID= ENSG00000101311.15 TPM= 20.83 Transcript Type= protein_coding chr20 6767664 6780280 6767664 6780280 + ENST00000378827.4@BMP2 ENST00000378827.4 protein_coding 6767664,6770120,6778245 6768875,6770472,6780280 Gene ID= ENSG00000125845.6 TPM= 6.34 Transcript Type= protein_coding chr20 7977348 8019829 7977348 8019829 - ENST00000246024.6@TMX4 ENST00000246024.6 protein_coding 8019438,8010200,8001496,7999732,7996026,7987288,7983794,7977348 8019829,8010315,8001541,7999860,7996071,7987389,7983857,7982621 Gene ID= ENSG00000125827.8 TPM= 57.05 Transcript Type= protein_coding chr20 8628288 8884896 8628288 8884896 + ENST00000612075.4@PLCB1 ENST00000612075.4 protein_coding 8628288,8646102,8647900,8649374,8657184,8658538,8684932,8697626,8708670,8716264,8717671,8722354,8724656,8727309,8729050,8733238,8737028,8739261,8740344,8741464,8757046,8760407,8765139,8774539,8788449,8788633,8789518,8790175,8802056,8881622 8628431,8646181,8647953,8649449,8657284,8658704,8685078,8697783,8708752,8716348,8717848,8722421,8724752,8727393,8729174,8733392,8737192,8739360,8740448,8741573,8757178,8760460,8765358,8774719,8788525,8788722,8789575,8790261,8802173,8884896 Gene ID= ENSG00000182621.17 TPM= 7.24 Transcript Type= protein_coding chr20 9537389 9839041 9537389 9839041 - ENST00000378429.3@PAK5 ENST00000378429.3 protein_coding 9838762,9818680,9711286,9644125,9580145,9565893,9562891,9557608,9544369,9542586,9537389 9839041,9818785,9711435,9644339,9580930,9566384,9563024,9557734,9544494,9542720,9539617 Gene ID= ENSG00000101349.16 TPM= 5.43 Transcript Type= protein_coding chr20 10218833 10307418 10218833 10307418 + ENST00000304886.6@SNAP25 ENST00000304886.6 protein_coding 10218833,10275429,10277685,10284724,10292882,10296925,10299268,10306129 10218977,10275563,10277726,10284772,10292999,10297050,10299412,10307418 Gene ID= ENSG00000132639.12 TPM= 2.72 Transcript Type= protein_coding chr20 10637684 10674107 10637684 10674107 - ENST00000254958.9@JAG1 ENST00000254958.9 protein_coding 10673450,10672701,10663963,10658468,10656398,10652468,10652131,10651581,10650247,10649522,10649061,10648549,10647960,10646939,10645971,10645356,10645143,10644863,10644357,10643778,10642488,10641783,10641460,10641113,10640783,10637684 10674107,10673006,10664014,10658722,10656458,10652598,10652250,10651694,10650360,10649635,10649107,10648722,10648110,10647103,10646084,10645469,10645256,10644979,10644384,10643863,10642601,10641892,10641693,10641244,10640933,10639955 Gene ID= ENSG00000101384.11 TPM= 5.43 Transcript Type= protein_coding chr20 11890817 11926609 11890817 11926609 + ENST00000399006.6@BTBD3 ENST00000399006.6 protein_coding 11890817,11917778,11918334,11919086,11919718,11922634 11890954,11918011,11918601,11919176,11919836,11926609 Gene ID= ENSG00000132640.14 TPM= 1.81 Transcript Type= protein_coding chr20 11890723 11926609 11890723 11926609 + ENST00000254977.7@BTBD3 ENST00000254977.7 protein_coding 11890723,11918334,11919086,11919718,11922634 11890954,11918601,11919176,11919836,11926609 Gene ID= ENSG00000132640.14 TPM= 17.21 Transcript Type= protein_coding chr20 11890828 11926609 11890828 11926609 + ENST00000405977.5@BTBD3 ENST00000405977.5 protein_coding 11890828,11917778,11919086,11919718,11922634 11890954,11918601,11919176,11919836,11926609 Gene ID= ENSG00000132640.14 TPM= 5.43 Transcript Type= protein_coding chr20 13008955 13166765 13008955 13166765 + transcript501.chr20.nic@SPTLC3 transcript501.chr20.nic protein_coding 13008955,13009201,13048945,13072256,13074349,13091083,13093484,13110112,13117506,13126591,13154003,13160003,13164754 13009072,13009384,13049130,13072410,13074497,13091207,13093577,13110217,13117725,13126717,13154138,13160132,13166765 Gene ID= ENSG00000172296.12 TPM= 2.72 Transcript Type= NA chr20 13008954 13164469 13008954 13164469 + transcript502.chr20.nic@SPTLC3 transcript502.chr20.nic protein_coding 13008954,13048945,13072256,13074349,13091083,13093484,13110112,13117506,13126591,13154003,13160003,13164357 13009384,13049130,13072410,13074497,13091207,13093577,13110217,13117725,13126717,13154138,13160132,13164469 Gene ID= ENSG00000172296.12 TPM= 1.81 Transcript Type= NA chr20 13389392 13638940 13389392 13638940 - ENST00000337743.8@TASP1 ENST00000337743.8 protein_coding 13638894,13629934,13625185,13623446,13587250,13580897,13569507,13559008,13534022,13528433,13483227,13435044,13417448,13389392 13638940,13630152,13625252,13623514,13587370,13580981,13569586,13559114,13534141,13528511,13483337,13435154,13417521,13390452 Gene ID= ENSG00000089123.15 TPM= 10.87 Transcript Type= protein_coding chr20 13714323 13784921 13714323 13784921 - transcript514.chr20.nnic@ESF1 transcript514.chr20.nnic protein_coding 13784880,13782504,13775873,13775157,13772515,13771331,13769907,13766777,13759692,13733721,13728378,13718908,13717368,13714323 13784921,13783183,13776270,13775270,13772615,13771483,13770021,13766924,13759853,13733842,13728465,13718984,13717514,13715167 Gene ID= ENSG00000089048.14 TPM= 11.77 Transcript Type= NA chr20 13785035 13817226 13785035 13817226 + transcript516.chr20.nic@NDUFAF5 transcript516.chr20.nic protein_coding 13785035,13787312,13788589,13793160,13794838,13798461,13801486,13808842,13814418,13816463,13816875,13817118 13785290,13787352,13788652,13793227,13794941,13798500,13801683,13808902,13814515,13816546,13816957,13817226 Gene ID= ENSG00000101247.17 TPM= 1.81 Transcript Type= NA chr20 13784950 13821582 13784950 13821582 + ENST00000378106.9@NDUFAF5 ENST00000378106.9 protein_coding 13784950,13787312,13788589,13793180,13794838,13798461,13801486,13808842,13816463,13816875,13817118 13785290,13787352,13788652,13793227,13794941,13798500,13801683,13808902,13816546,13816957,13821582 Gene ID= ENSG00000101247.17 TPM= 5.43 Transcript Type= protein_coding chr20 16272102 16573398 16272102 16573398 - transcript529.chr20.nnic@KIF16B transcript529.chr20.nnic protein_coding 16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16378805,16374257,16371665,16370586,16335926,16312335,16272102 16573398,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163,16374409,16371761,16370636,16336015,16312418,16273411 Gene ID= ENSG00000089177.18 TPM= 2.42 Transcript Type= NA chr20 16272104 16573433 16272104 16573433 - ENST00000354981.6@KIF16B ENST00000354981.6 protein_coding 16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16378805,16374257,16371665,16370586,16356330,16335926,16312335,16272104 16573433,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163,16374409,16371761,16370636,16356452,16336015,16312418,16273411 Gene ID= ENSG00000089177.18 TPM= 31.4 Transcript Type= protein_coding chr20 16272104 16573434 16272104 16573434 - ENST00000636835.1@KIF16B ENST00000636835.1 protein_coding 16573229,16528371,16526092,16515548,16512826,16511418,16507958,16506022,16505722,16504372,16497613,16494291,16429863,16428953,16427104,16406374,16404813,16381694,16378805,16371665,16370586,16356330,16335926,16312335,16272104 16573434,16528440,16526205,16515664,16512923,16511527,16508100,16506190,16505853,16504547,16497678,16494350,16429982,16429004,16427241,16406456,16404901,16381747,16380163,16371761,16370636,16356452,16336015,16312418,16273411 Gene ID= ENSG00000089177.18 TPM= 4.23 Transcript Type= protein_coding chr20 16729961 16741776 16729961 16741776 + ENST00000377943.9@SNRPB2 ENST00000377943.9 protein_coding 16729961,16731668,16732164,16737261,16738852,16740325,16740846 16730064,16731766,16732336,16737401,16738902,16740413,16741776 Gene ID= ENSG00000125870.10 TPM= 13.58 Transcript Type= protein_coding chr20 16729984 16742563 16729984 16742563 + ENST00000246071.7@SNRPB2 ENST00000246071.7 protein_coding 16729984,16731668,16732164,16737261,16738852,16740325,16740846 16730164,16731766,16732336,16737401,16738902,16740413,16742563 Gene ID= ENSG00000125870.10 TPM= 25.36 Transcript Type= protein_coding chr20 17569190 17608244 17569190 17608244 + transcript534.chr20.nnic@DSTN transcript534.chr20.nnic protein_coding 17569190,17569845,17600738,17604555,17607037 17569318,17570211,17601045,17604631,17608244 Gene ID= ENSG00000125868.15 TPM= 482.66 Transcript Type= NA chr20 17570082 17608242 17570082 17608242 + ENST00000474024.5@DSTN ENST00000474024.5 protein_coding 17570082,17591932,17600738,17604555,17607037 17570211,17592063,17601045,17604631,17608242 Gene ID= ENSG00000125868.15 TPM= 31.69 Transcript Type= protein_coding chr20 17613678 17682283 17613678 17682283 - ENST00000377807.6@RRBP1 ENST00000377807.6 protein_coding 17682028,17679999,17659980,17658605,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678 17682283,17680075,17660528,17658689,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220 Gene ID= ENSG00000125844.15 TPM= 3.62 Transcript Type= protein_coding chr20 17613677 17682299 17613677 17682299 - transcript554.chr20.nic@RRBP1 transcript554.chr20.nic protein_coding 17682028,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613677 17682299,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220 Gene ID= ENSG00000125844.15 TPM= 58.95 Transcript Type= NA chr20 17613678 17682233 17613678 17682233 - ENST00000377813.5@RRBP1 ENST00000377813.5 protein_coding 17682028,17679999,17658596,17642979,17641797,17636577,17635546,17633460,17629823,17627504,17627348,17625512,17624576,17621855,17621690,17621458,17620715,17620299,17619633,17618596,17616732,17615926,17615431,17614737,17613678 17682233,17680075,17660528,17643127,17641919,17636729,17635664,17633613,17629961,17627682,17627382,17625602,17624668,17621947,17621773,17621547,17620807,17620370,17619728,17618679,17616839,17616009,17615529,17614880,17614220 Gene ID= ENSG00000125844.15 TPM= 33.6 Transcript Type= protein_coding chr20 17941597 17968980 17941597 17968980 - ENST00000377768.7@SNX5 ENST00000377768.7 protein_coding 17968700,17968375,17956933,17955365,17953996,17952587,17951500,17950291,17950132,17949064,17948890,17947486,17943110,17941597 17968980,17968457,17957037,17955475,17954117,17952710,17951595,17950396,17950207,17949103,17948976,17947645,17943195,17942407 Gene ID= ENSG00000089006.16 TPM= 56.3 Transcript Type= protein_coding chr20 17969046 17991120 17969046 17991120 + transcript577.chr20.nnic@MGME1 transcript577.chr20.nnic protein_coding 17969046,17969801,17975684,17989939 17969141,17970370,17975903,17991120 Gene ID= ENSG00000125871.13 TPM= 5.43 Transcript Type= NA chr20 17969066 17991120 17969066 17991120 + transcript578.chr20.nic@MGME1 transcript578.chr20.nic protein_coding 17969066,17969801,17988166,17989939 17969141,17970370,17988298,17991120 Gene ID= ENSG00000125871.13 TPM= 2.11 Transcript Type= NA chr20 17968906 17991120 17968906 17991120 + transcript580.chr20.nic@MGME1 transcript580.chr20.nic protein_coding 17968906,17975684,17988166,17989939 17970370,17975903,17988298,17991120 Gene ID= ENSG00000125871.13 TPM= 12.98 Transcript Type= NA chr20 17968913 17991122 17968913 17991122 + ENST00000377710.9@MGME1 ENST00000377710.9 protein_coding 17968913,17969801,17975684,17988166,17989939 17969141,17970370,17975903,17988298,17991122 Gene ID= ENSG00000125871.13 TPM= 25.65 Transcript Type= protein_coding chr20 17969115 17991122 17969115 17991122 + ENST00000377704.4@MGME1 ENST00000377704.4 protein_coding 17969115,17969801,17989939 17969141,17970370,17991122 Gene ID= ENSG00000125871.13 TPM= 1.81 Transcript Type= protein_coding chr20 18137812 18188372 18137812 18188372 + transcript586.chr20.nic@KAT14 transcript586.chr20.nic protein_coding 18137812,18142208,18145233,18150821,18159084,18161820,18162377,18181710,18183123,18184602,18187286 18138051,18142919,18145351,18150942,18159265,18162239,18162945,18181846,18183298,18184792,18188372 Gene ID= ENSG00000149474.13 TPM= 37.13 Transcript Type= NA chr20 18137870 18188032 18137870 18188032 + transcript592.chr20.nnic@KAT14 transcript592.chr20.nnic protein_coding 18137870,18142208,18161856,18162377,18181710,18183123,18184602,18187286 18138051,18142823,18162239,18162945,18181846,18183298,18184792,18188032 Gene ID= ENSG00000149474.13 TPM= 1.81 Transcript Type= NA chr20 18137873 18143169 18137873 18143169 + ENST00000432901.3@PET117 ENST00000432901.3 protein_coding 18137873,18142208 18138051,18143169 Gene ID= ENSG00000232838.3 TPM= 24.45 Transcript Type= protein_coding chr20 18288477 18316996 18288477 18316996 + ENST00000377671.7@ZNF133 ENST00000377671.7 protein_coding 18288477,18297985,18298289,18305008,18305681,18306298,18315072 18288604,18298062,18298464,18305178,18305807,18306393,18316996 Gene ID= ENSG00000125846.15 TPM= 1.81 Transcript Type= protein_coding chr20 18288536 18316994 18288536 18316994 + transcript601.chr20.nnic@ZNF133 transcript601.chr20.nnic protein_coding 18288536,18305681,18306298,18315069 18288604,18305807,18306393,18316994 Gene ID= ENSG00000125846.15 TPM= 1.81 Transcript Type= NA chr20 18389118 18400108 18389118 18400108 + transcript603.chr20.nnic@NA transcript603.chr20.nnic NA 18389118,18389812,18399734 18389164,18390018,18400108 Gene ID= novel_gene_chr20_604 TPM= 1.81 Transcript Type= NA chr20 18467127 18484643 18467127 18484643 + ENST00000377603.4@POLR3F ENST00000377603.4 protein_coding 18467127,18468944,18472842,18473391,18475075,18480038,18480402,18481619,18483481 18467568,18469061,18472909,18473458,18475187,18480181,18480509,18481810,18484643 Gene ID= ENSG00000132664.11 TPM= 12.68 Transcript Type= protein_coding chr20 18486540 18497243 18486540 18497243 - ENST00000337227.8@RBBP9 ENST00000337227.8 protein_coding 18497069,18495838,18493958,18490395,18486540 18497243,18495880,18494063,18490480,18489990 Gene ID= ENSG00000089050.15 TPM= 34.41 Transcript Type= protein_coding chr20 18507504 18561414 18507504 18561414 + transcript613.chr20.nic@SEC23B transcript613.chr20.nic protein_coding 18507504,18510822,18512225,18515650,18524433,18524935,18525788,18526373,18527496,18530680,18532664,18535653,18542296,18543019,18545956,18548609,18551089,18554235,18555108,18560651 18507669,18511056,18512282,18515736,18524669,18525020,18525932,18526531,18527611,18530803,18532744,18535742,18542402,18543172,18546033,18548770,18551175,18554390,18555173,18561414 Gene ID= ENSG00000101310.14 TPM= 14.87 Transcript Type= NA chr20 18507555 18561415 18507555 18561415 + ENST00000336714.7@SEC23B ENST00000336714.7 protein_coding 18507555,18510822,18512225,18515650,18524433,18524935,18525788,18526373,18527496,18530680,18532664,18535653,18542296,18543019,18545956,18548609,18551089,18554235,18555108,18560651 18507972,18511056,18512282,18515736,18524669,18525020,18525932,18526531,18527611,18530803,18532744,18535742,18542402,18543172,18546033,18548770,18551175,18554390,18555173,18561415 Gene ID= ENSG00000101310.14 TPM= 85.5 Transcript Type= protein_coding chr20 18507579 18561415 18507579 18561415 + ENST00000377475.7@SEC23B ENST00000377475.7 protein_coding 18507579,18510822,18512225,18515650,18524433,18524935,18525788,18526373,18527496,18530680,18532664,18535653,18542296,18543019,18545956,18548609,18551089,18554235,18555108,18560651 18507990,18511056,18512282,18515736,18524669,18525020,18525932,18526531,18527611,18530803,18532744,18535742,18542402,18543172,18546033,18548770,18551175,18554390,18555173,18561415 Gene ID= ENSG00000101310.14 TPM= 88.22 Transcript Type= protein_coding chr20 18567420 18569563 18567420 18569563 + ENST00000411646.1@SMIM26 ENST00000411646.1 protein_coding 18567420,18569236 18567596,18569563 Gene ID= ENSG00000232388.4 TPM= 115.91 Transcript Type= protein_coding chr20 18587893 18763917 18587893 18763917 + ENST00000377452.3@DTD1 ENST00000377452.3 protein_coding 18587893,18593731,18596006,18628127,18744100,18763360 18588115,18593821,18596241,18628233,18744271,18763917 Gene ID= ENSG00000125821.11 TPM= 32.6 Transcript Type= protein_coding chr20 19515486 19722900 19515486 19722900 + transcript631.chr20.nic@SLC24A3 transcript631.chr20.nic protein_coding 19515486,19580000,19584971,19585441,19654062,19665864,19673601,19681858,19684176,19685100,19693259,19696797,19698568,19717528,19720991 19515564,19580074,19585055,19585544,19654136,19665889,19673654,19681991,19684336,19685361,19693425,19696911,19698680,19717593,19722900 Gene ID= ENSG00000185052.11 TPM= 9.96 Transcript Type= NA chr20 19757433 20002456 19757433 20002456 + transcript635.chr20.nnic@RIN2 transcript635.chr20.nnic protein_coding 19757433,19799622,19889566,19935099,19956615,19960700,19964952,19970838,19974654,19990006,19992168,19996679,20000613 19757939,19799747,19889658,19935199,19956807,19960811,19965024,19970929,19975787,19990311,19992299,19996842,20002456 Gene ID= ENSG00000132669.12 TPM= 16.3 Transcript Type= NA chr20 19886521 20002457 19886521 20002457 + ENST00000255006.10@RIN2 ENST00000255006.10 protein_coding 19886521,19889566,19935099,19956615,19960700,19964952,19970838,19974654,19990006,19992168,19996679,20000613 19886780,19889658,19935199,19956807,19960811,19965024,19970929,19975787,19990311,19992299,19996842,20002457 Gene ID= ENSG00000132669.12 TPM= 12.68 Transcript Type= protein_coding chr20 19886632 19962837 19886632 19962837 + transcript638.chr20.nnic@RIN2 transcript638.chr20.nnic protein_coding 19886632,19889560,19935099,19956615,19960700 19886775,19889658,19935199,19956807,19962837 Gene ID= ENSG00000132669.12 TPM= 2.72 Transcript Type= NA chr20 19885052 19890283 19885052 19890283 + transcript639.chr20.nnic@RIN2 transcript639.chr20.nnic protein_coding 19885052,19886711,19889566 19885140,19886780,19890283 Gene ID= ENSG00000132669.12 TPM= 1.81 Transcript Type= NA chr20 20017359 20033629 20017359 20033629 + ENST00000480550.1@NAA20 ENST00000480550.1 protein_coding 20017359,20025669,20026784,20032508,20033102 20017449,20025767,20026919,20032653,20033629 Gene ID= ENSG00000173418.11 TPM= 1.81 Transcript Type= processed_transcript chr20 20017390 20033655 20017390 20033655 + ENST00000398602.2@NAA20 ENST00000398602.2 protein_coding 20017390,20022456,20025677,20026784,20032508,20033102 20018041,20022480,20025767,20026919,20032653,20033655 Gene ID= ENSG00000173418.11 TPM= 1.81 Transcript Type= protein_coding chr20 21126010 21246618 21126010 21246618 + transcript647.chr20.nic@KIZ transcript647.chr20.nic protein_coding 21126010,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479 21126204,21132159,21136552,21145654,21162507,21163159,21205530,21214700,21215648,21229115,21232830,21244288,21246618 Gene ID= ENSG00000088970.15 TPM= 1.81 Transcript Type= NA chr20 21126054 21246622 21126054 21246622 + ENST00000619189.4@KIZ ENST00000619189.4 protein_coding 21126054,21132097,21136390,21145565,21161871,21162850,21205491,21214535,21215583,21229011,21232734,21244245,21246479 21126204,21132159,21136552,21145654,21162507,21163159,21205584,21214700,21215648,21229115,21232830,21244288,21246622 Gene ID= ENSG00000088970.15 TPM= 4.53 Transcript Type= protein_coding chr20 21303597 21389827 21303597 21389827 + transcript661.chr20.nnic@XRN2 transcript661.chr20.nnic protein_coding 21303597,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273 21303847,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827 Gene ID= ENSG00000088930.7 TPM= 6.34 Transcript Type= NA chr20 21303789 21389827 21303789 21389827 + transcript663.chr20.nnic@XRN2 transcript663.chr20.nnic protein_coding 21303789,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273 21304167,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827 Gene ID= ENSG00000088930.7 TPM= 5.43 Transcript Type= NA chr20 21303303 21389827 21303303 21389827 + transcript669.chr20.nnic@XRN2 transcript669.chr20.nnic protein_coding 21303303,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273 21303473,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827 Gene ID= ENSG00000088930.7 TPM= 6.34 Transcript Type= NA chr20 21303304 21389827 21303304 21389827 + ENST00000377191.4@XRN2 ENST00000377191.4 protein_coding 21303304,21326279,21326490,21328559,21330481,21330616,21331561,21331768,21332283,21333544,21333704,21333937,21334078,21339044,21340721,21344090,21346415,21348146,21348341,21349389,21354789,21356080,21356586,21357736,21365421,21365573,21368463,21381994,21386868,21389273 21303473,21326406,21326601,21328670,21330539,21330705,21331633,21331818,21332440,21333618,21333837,21333994,21334185,21339088,21340852,21344208,21346550,21348253,21348430,21349461,21354872,21356177,21356665,21357792,21365489,21365704,21368590,21382057,21387006,21389827 Gene ID= ENSG00000088930.7 TPM= 200.13 Transcript Type= protein_coding chr20 23079349 23086340 23079349 23086340 - ENST00000246006.4@CD93 ENST00000246006.4 protein_coding 23084259,23079349 23086340,23083974 Gene ID= ENSG00000125810.9 TPM= 28.98 Transcript Type= protein_coding chr20 23350736 23354777 23350736 23354777 + ENST00000254998.2@NXT1 ENST00000254998.2 protein_coding 23350736,23353981 23351061,23354777 Gene ID= ENSG00000132661.3 TPM= 22.64 Transcript Type= protein_coding chr20 23361338 23372246 23361338 23372246 + transcript684.chr20.nnic@GZF1 transcript684.chr20.nnic protein_coding 23361338,23364363,23367003,23368762,23369584,23370091 23361662,23365747,23367097,23368929,23369741,23372246 Gene ID= ENSG00000125812.15 TPM= 3.24 Transcript Type= NA chr20 23362168 23372263 23362168 23372263 + transcript687.chr20.nnic@GZF1 transcript687.chr20.nnic protein_coding 23362168,23364363,23367003,23368762,23369584,23370137 23362237,23365747,23367097,23368929,23369741,23372263 Gene ID= ENSG00000125812.15 TPM= 2.94 Transcript Type= NA chr20 23362212 23372246 23362212 23372246 + transcript689.chr20.nnic@GZF1 transcript689.chr20.nnic protein_coding 23362212,23364363,23367003,23368762,23369584,23370091 23362850,23365747,23367097,23368929,23369741,23372246 Gene ID= ENSG00000125812.15 TPM= 2.34 Transcript Type= NA chr20 23362182 23373063 23362182 23373063 + ENST00000338121.9@GZF1 ENST00000338121.9 protein_coding 23362182,23364363,23367003,23368762,23369584,23370091 23362237,23365747,23367097,23368929,23369741,23373063 Gene ID= ENSG00000125812.15 TPM= 11.39 Transcript Type= protein_coding chr20 23374519 23421519 23374519 23421519 - ENST00000398425.7@NAPB ENST00000398425.7 protein_coding 23421305,23402993,23397072,23394922,23390209,23389946,23381213,23379867,23379445,23374519 23421519,23403072,23397188,23394999,23390264,23390030,23381317,23379935,23379495,23377486 Gene ID= ENSG00000125814.17 TPM= 4.07 Transcript Type= protein_coding chr20 23374527 23421496 23374527 23421496 - transcript696.chr20.nic@NAPB transcript696.chr20.nic protein_coding 23421305,23402993,23394922,23390209,23389946,23381213,23379867,23379445,23374527 23421496,23403072,23394999,23390264,23390030,23381317,23379935,23379495,23377486 Gene ID= ENSG00000125814.17 TPM= 5.89 Transcript Type= NA chr20 23374527 23386734 23374527 23386734 - transcript698.chr20.nnic@NAPB transcript698.chr20.nnic protein_coding 23386571,23381213,23379867,23379445,23374527 23386734,23381317,23379935,23379495,23377486 Gene ID= ENSG00000125814.17 TPM= 7.7 Transcript Type= NA chr20 23374522 23421488 23374522 23421488 - ENST00000377026.4@NAPB ENST00000377026.4 protein_coding 23421305,23402993,23397072,23395139,23394922,23390209,23389946,23381213,23379867,23379445,23374522 23421488,23403072,23397188,23395185,23394999,23390264,23390030,23381317,23379935,23379495,23377486 Gene ID= ENSG00000125814.17 TPM= 14.04 Transcript Type= protein_coding chr20 23633648 23638026 23633648 23638026 - ENST00000376925.7@CST3 ENST00000376925.7 protein_coding 23637620,23635254,23633648 23638026,23635367,23633999 Gene ID= ENSG00000101439.8 TPM= 1009.38 Transcript Type= protein_coding chr20 24962925 24992979 24962925 24992979 - ENST00000217456.2@APMAP ENST00000217456.2 protein_coding 24992594,24983903,24978767,24973645,24971460,24970197,24969526,24968892,24962925 24992979,24984019,24978882,24973737,24971576,24970371,24969660,24969084,24964022 Gene ID= ENSG00000101474.11 TPM= 173.86 Transcript Type= protein_coding chr20 24962945 24992785 24962945 24992785 - transcript722.chr20.nnic@APMAP transcript722.chr20.nnic protein_coding 24992594,24983903,24978767,24973645,24971460,24970197,24969526,24962945 24992785,24984019,24978882,24973737,24971576,24970371,24969660,24964022 Gene ID= ENSG00000101474.11 TPM= 19.92 Transcript Type= NA chr20 25006232 25058408 25006232 25058408 - transcript728.chr20.nic@ACSS1 transcript728.chr20.nic protein_coding 25057769,25048085,25030759,25023466,25022940,25021389,25020010,25015138,25013961,25013536,25012601,25009270,25006232 25058408,25048181,25030958,25023641,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25009388,25007941 Gene ID= ENSG00000154930.14 TPM= 7.24 Transcript Type= NA chr20 25006232 25058182 25006232 25058182 - ENST00000323482.8@ACSS1 ENST00000323482.8 protein_coding 25057769,25048085,25030759,25023466,25022940,25021389,25020010,25015138,25013961,25013536,25012812,25012601,25009270,25006232 25058182,25048181,25030958,25023641,25023092,25021536,25020147,25015230,25014073,25013662,25012939,25012664,25009388,25007941 Gene ID= ENSG00000154930.14 TPM= 79.69 Transcript Type= protein_coding chr20 25195691 25226716 25195691 25226716 + transcript746.chr20.nic@ENTPD6 transcript746.chr20.nic protein_coding 25195691,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499 25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226716 Gene ID= ENSG00000197586.12 TPM= 33.16 Transcript Type= NA chr20 25195679 25226721 25195679 25226721 + transcript763.chr20.nic@ENTPD6 transcript763.chr20.nic protein_coding 25195679,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225162,25225499 25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226721 Gene ID= ENSG00000197586.12 TPM= 25.92 Transcript Type= NA chr20 25195691 25226714 25195691 25226714 + transcript769.chr20.nic@ENTPD6 transcript769.chr20.nic protein_coding 25195691,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499 25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226714 Gene ID= ENSG00000197586.12 TPM= 17.25 Transcript Type= NA chr20 25195690 25226716 25195690 25226716 + transcript788.chr20.nic@ENTPD6 transcript788.chr20.nic protein_coding 25195690,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499 25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226716 Gene ID= ENSG00000197586.12 TPM= 14.91 Transcript Type= NA chr20 25195690 25226714 25195690 25226714 + transcript800.chr20.nic@ENTPD6 transcript800.chr20.nic protein_coding 25195690,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25224101,25225205,25225499 25195867,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226714 Gene ID= ENSG00000197586.12 TPM= 14.24 Transcript Type= NA chr20 25195693 25226729 25195693 25226729 + ENST00000354989.9@ENTPD6 ENST00000354989.9 protein_coding 25195693,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499 25195867,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729 Gene ID= ENSG00000197586.12 TPM= 62.53 Transcript Type= protein_coding chr20 25195701 25226729 25195701 25226729 + ENST00000360031.6@ENTPD6 ENST00000360031.6 protein_coding 25195701,25206522,25207079,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499 25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729 Gene ID= ENSG00000197586.12 TPM= 51.43 Transcript Type= protein_coding chr20 25195720 25226729 25195720 25226729 + ENST00000376652.8@ENTPD6 ENST00000376652.8 protein_coding 25195720,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25221232,25222838,25224101,25225205,25225499 25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25221333,25222978,25224157,25225317,25226729 Gene ID= ENSG00000197586.12 TPM= 58.91 Transcript Type= protein_coding chr20 25195757 25226729 25195757 25226729 + ENST00000433259.6@ENTPD6 ENST00000433259.6 protein_coding 25195757,25206522,25207076,25209849,25213263,25214867,25215676,25216648,25217502,25218550,25222838,25224101,25225162,25225499 25195867,25206590,25207397,25209925,25213406,25214942,25215711,25216736,25217581,25218614,25222978,25224157,25225317,25226729 Gene ID= ENSG00000197586.12 TPM= 2.15 Transcript Type= protein_coding chr20 25248069 25298014 25248069 25298014 + ENST00000216962.8@PYGB ENST00000216962.8 protein_coding 25248069,25259237,25269129,25271383,25274592,25276646,25277244,25278319,25279057,25280266,25280949,25282033,25283176,25284104,25288425,25290481,25292406,25294158,25295604,25296370 25248421,25259338,25269207,25271486,25274723,25276757,25277326,25278462,25279149,25280412,25281112,25282147,25283277,25284251,25288483,25290622,25292613,25294292,25295670,25298014 Gene ID= ENSG00000100994.11 TPM= 247.21 Transcript Type= protein_coding chr20 25300198 25390976 25300198 25390976 - ENST00000339157.9@ABHD12 ENST00000339157.9 protein_coding 25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25300198 25390976,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25300884 Gene ID= ENSG00000100997.18 TPM= 148.89 Transcript Type= protein_coding chr20 25294743 25390983 25294743 25390983 - ENST00000376542.7@ABHD12 ENST00000376542.7 protein_coding 25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25302219,25294743 25390983,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346,25295030 Gene ID= ENSG00000100997.18 TPM= 26.26 Transcript Type= protein_coding chr20 25300199 25390878 25300199 25390878 - transcript832.chr20.nic@ABHD12 transcript832.chr20.nic protein_coding 25390513,25339227,25323325,25320199,25317048,25314925,25309446,25308457,25307966,25306833,25303550,25300199 25390878,25339351,25323430,25320318,25317078,25314970,25309575,25308494,25308045,25306915,25303628,25302346 Gene ID= ENSG00000100997.18 TPM= 9.06 Transcript Type= NA chr20 25452697 25585531 25452697 25585531 - transcript844.chr20.nnic@NINL transcript844.chr20.nnic protein_coding 25585455,25526408,25517753,25512834,25510674,25509670,25504888,25503952,25500840,25498210,25496663,25491351,25489875,25489244,25481968,25480161,25478923,25476043,25469991,25467389,25462383,25461522,25458383,25455673,25452697 25585531,25526598,25517849,25513006,25510740,25509789,25505078,25504104,25501010,25498346,25496803,25491525,25489985,25489324,25482100,25480267,25479206,25477089,25470095,25467458,25462541,25461635,25458529,25455786,25453642 Gene ID= ENSG00000101004.14 TPM= 2.72 Transcript Type= NA chr20 25452697 25540385 25452697 25540385 - transcript846.chr20.nnic@NINL transcript846.chr20.nnic protein_coding 25540022,25526408,25517753,25512834,25510674,25504888,25503952,25500840,25498210,25496663,25491351,25489875,25489244,25481968,25480161,25478923,25476043,25469991,25467389,25462383,25461522,25458383,25455673,25452697 25540385,25526598,25517849,25513006,25510740,25505078,25504104,25501010,25498346,25496803,25491525,25489985,25489324,25482100,25480267,25479206,25477089,25470095,25467458,25462541,25461635,25458529,25455786,25453642 Gene ID= ENSG00000101004.14 TPM= 1.81 Transcript Type= NA chr20 25452705 25585517 25452705 25585517 - ENST00000278886.10@NINL ENST00000278886.10 protein_coding 25585455,25526408,25517753,25512834,25510674,25504888,25503952,25500840,25498210,25496663,25491351,25489875,25489244,25481968,25480161,25478923,25476043,25469991,25467389,25462383,25461522,25458383,25455673,25452705 25585517,25526598,25517849,25513006,25510740,25505078,25504104,25501010,25498346,25496803,25491525,25489985,25489324,25482100,25480267,25479206,25477089,25470095,25467458,25462541,25461635,25458529,25455786,25453642 Gene ID= ENSG00000101004.14 TPM= 10.87 Transcript Type= protein_coding chr20 25612935 25624175 25612935 25624175 - ENST00000304788.3@NANP ENST00000304788.3 protein_coding 25623859,25612935 25624175,25616581 Gene ID= ENSG00000170191.4 TPM= 12.68 Transcript Type= protein_coding chr20 25674209 25696613 25674209 25696613 - transcript857.chr20.nnic@ZNF337 transcript857.chr20.nnic protein_coding 25696459,25686391,25685996,25685567,25674209 25696613,25686466,25686122,25685662,25677037 Gene ID= ENSG00000130684.13 TPM= 2.34 Transcript Type= NA chr20 25674213 25696869 25674213 25696869 - transcript861.chr20.nnic@ZNF337 transcript861.chr20.nnic protein_coding 25696759,25686391,25685996,25674213 25696869,25686466,25686122,25677037 Gene ID= ENSG00000130684.13 TPM= 7.47 Transcript Type= NA chr20 25674215 25696841 25674215 25696841 - ENST00000252979.5@ZNF337 ENST00000252979.5 protein_coding 25696759,25686391,25685996,25685567,25674215 25696841,25686466,25686122,25685662,25677037 Gene ID= ENSG00000130684.13 TPM= 18.64 Transcript Type= protein_coding chr20 25674215 25686957 25674215 25686957 - ENST00000376436.5@ZNF337 ENST00000376436.5 protein_coding 25686391,25685996,25685567,25674215 25686957,25686122,25685662,25677037 Gene ID= ENSG00000130684.13 TPM= 1.43 Transcript Type= protein_coding chr20 26009807 26023265 26009807 26023265 + transcript867.chr20.nnic@AL450124.1 transcript867.chr20.nnic unprocessed_pseudogene 26009807,26019076,26019829,26020877 26009889,26019202,26019924,26023265 Gene ID= ENSG00000204556.4 TPM= 2.72 Transcript Type= NA chr20 28562994 28602842 28562994 28602842 - transcript872.chr20.nnic@FRG1CP transcript872.chr20.nnic unprocessed_pseudogene 28602609,28601657,28600392,28591394,28590557,28588643,28586299,28583019,28581919,28562994 28602842,28601756,28600461,28591519,28590614,28588757,28586403,28583110,28582029,28565400 Gene ID= ENSG00000282826.1 TPM= 3.62 Transcript Type= NA chr20 28580564 28602779 28580564 28602779 - transcript874.chr20.nnic@FRG1CP transcript874.chr20.nnic unprocessed_pseudogene 28602609,28601657,28600591,28600392,28591394,28590557,28588643,28586299,28580564 28602779,28601756,28600719,28600461,28591519,28590614,28588757,28586403,28583110 Gene ID= ENSG00000282826.1 TPM= 2.72 Transcript Type= NA chr20 28580634 28602795 28580634 28602795 - transcript876.chr20.nic@FRG1CP transcript876.chr20.nic unprocessed_pseudogene 28602609,28600392,28591394,28590557,28588643,28586299,28580634 28602795,28600461,28591519,28590614,28588757,28586403,28583110 Gene ID= ENSG00000282826.1 TPM= 2.72 Transcript Type= NA chr20 28583027 28602795 28583027 28602795 - transcript877.chr20.nic@FRG1CP transcript877.chr20.nic unprocessed_pseudogene 28602609,28600392,28591394,28590557,28588643,28583027 28602795,28600461,28591519,28590614,28588757,28586403 Gene ID= ENSG00000282826.1 TPM= 1.81 Transcript Type= NA chr20 29457122 29497336 29457122 29497336 - transcript881.chr20.nnic@FRG1EP transcript881.chr20.nnic unprocessed_pseudogene 29496813,29494886,29490847,29485740,29482454,29481358,29457122 29497336,29494955,29490972,29485841,29482545,29481468,29458574 Gene ID= ENSG00000282995.1 TPM= 2.72 Transcript Type= NA chr20 29476575 29497336 29476575 29497336 - transcript884.chr20.nnic@FRG1EP transcript884.chr20.nnic unprocessed_pseudogene 29497118,29494886,29490847,29485740,29482454,29481358,29476575 29497336,29494955,29490972,29485841,29482545,29481468,29478690 Gene ID= ENSG00000282995.1 TPM= 2.72 Transcript Type= NA chr20 29480073 29497336 29480073 29497336 - transcript885.chr20.nnic@FRG1EP transcript885.chr20.nnic unprocessed_pseudogene 29496813,29494886,29490847,29485740,29482454,29480073 29497336,29494955,29490972,29485841,29482545,29481468 Gene ID= ENSG00000282995.1 TPM= 6.34 Transcript Type= NA chr20 30377164 30406716 30377164 30406716 + transcript896.chr20.nnic@FRG1BP transcript896.chr20.nnic unprocessed_pseudogene 30377164,30379585,30388453,30391197,30393551,30396862,30397935,30404268 30377721,30379651,30388578,30391308,30393655,30396953,30398045,30406716 Gene ID= ENSG00000149531.15 TPM= 29.58 Transcript Type= NA chr20 30377165 30406716 30377165 30406716 + transcript897.chr20.nnic@FRG1BP transcript897.chr20.nnic unprocessed_pseudogene 30377165,30379585,30388453,30391197,30393551,30396862,30397935,30404268 30377425,30379651,30388578,30391308,30393655,30396953,30398045,30406716 Gene ID= ENSG00000149531.15 TPM= 25.51 Transcript Type= NA chr20 30377215 30399336 30377215 30399336 + transcript899.chr20.nnic@FRG1BP transcript899.chr20.nnic unprocessed_pseudogene 30377215,30379585,30388453,30393551,30396862,30397935,30399222 30377721,30379651,30388578,30393655,30396953,30398045,30399336 Gene ID= ENSG00000149531.15 TPM= 1.81 Transcript Type= NA chr20 30377165 30399336 30377165 30399336 + transcript900.chr20.nnic@FRG1BP transcript900.chr20.nnic unprocessed_pseudogene 30377165,30379585,30388453,30393551,30396862,30397935,30399222 30377425,30379651,30388578,30393655,30396953,30398045,30399336 Gene ID= ENSG00000149531.15 TPM= 3.17 Transcript Type= NA chr20 31475293 31484905 31475293 31484905 + ENST00000201979.2@REM1 ENST00000201979.2 protein_coding 31475293,31476227,31477828,31482287,31484159 31475366,31476785,31477910,31482488,31484905 Gene ID= ENSG00000088320.3 TPM= 6.34 Transcript Type= protein_coding chr20 31514428 31571606 31514428 31571606 + ENST00000398174.7@HM13 ENST00000398174.7 protein_coding 31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31568078,31569120 31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31568224,31571606 Gene ID= ENSG00000101294.16 TPM= 9.06 Transcript Type= protein_coding chr20 31514428 31569567 31514428 31569567 + ENST00000335574.9@HM13 ENST00000335574.9 protein_coding 31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31568078,31569120 31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31568280,31569567 Gene ID= ENSG00000101294.16 TPM= 9.06 Transcript Type= protein_coding chr20 31514428 31569567 31514428 31569567 + ENST00000340852.9@HM13 ENST00000340852.9 protein_coding 31514428,31527484,31538179,31544947,31549029,31549207,31550064,31554746,31559611,31561634,31566210,31569120 31514734,31527582,31538261,31545035,31549114,31549332,31550121,31554829,31559647,31561736,31566295,31569567 Gene ID= ENSG00000101294.16 TPM= 309.4 Transcript Type= protein_coding chr20 31514457 31541733 31514457 31541733 + ENST00000498035.5@HM13 ENST00000498035.5 protein_coding 31514457,31527484,31538179 31514734,31527582,31541733 Gene ID= ENSG00000101294.16 TPM= 7.24 Transcript Type= protein_coding chr20 31605283 31606515 31605283 31606515 + ENST00000376112.3@ID1 ENST00000376112.3 protein_coding 31605283,31606053 31605813,31606515 Gene ID= ENSG00000125968.8 TPM= 72.44 Transcript Type= protein_coding chr20 31664459 31723601 31664459 31723601 - transcript936.chr20.nic@BCL2L1 transcript936.chr20.nic protein_coding 31722618,31721655,31664459 31723601,31722330,31666086 Gene ID= ENSG00000171552.12 TPM= 18.02 Transcript Type= NA chr20 31664459 31723960 31664459 31723960 - transcript940.chr20.nic@BCL2L1 transcript940.chr20.nic protein_coding 31723735,31721655,31664459 31723960,31722348,31666086 Gene ID= ENSG00000171552.12 TPM= 4.44 Transcript Type= NA chr20 31664459 31723968 31664459 31723968 - transcript941.chr20.nic@BCL2L1 transcript941.chr20.nic protein_coding 31723864,31721655,31664459 31723968,31722348,31666086 Gene ID= ENSG00000171552.12 TPM= 3.53 Transcript Type= NA chr20 31664452 31722898 31664452 31722898 - ENST00000307677.4@BCL2L1 ENST00000307677.4 protein_coding 31722618,31721655,31664452 31722898,31722348,31666086 Gene ID= ENSG00000171552.12 TPM= 31.6 Transcript Type= protein_coding chr20 31664452 31722860 31664452 31722860 - ENST00000376055.8@BCL2L1 ENST00000376055.8 protein_coding 31722618,31721844,31664452 31722860,31722348,31666086 Gene ID= ENSG00000171552.12 TPM= 2.26 Transcript Type= protein_coding chr20 31739271 31801805 31739271 31801805 + ENST00000300403.10@TPX2 ENST00000300403.10 protein_coding 31739271,31742541,31757407,31760057,31766556,31770343,31771560,31775867,31777487,31778813,31782249,31783705,31792735,31793848,31794402,31797404,31798365,31800970 31739621,31742647,31757582,31760179,31766682,31770471,31771682,31775988,31777638,31778984,31782390,31783921,31792830,31794024,31794548,31797515,31798552,31801805 Gene ID= ENSG00000088325.15 TPM= 1.81 Transcript Type= protein_coding chr20 31944342 31952092 31944342 31952092 - ENST00000202017.5@PDRG1 ENST00000202017.5 protein_coding 31951875,31950312,31948808,31946496,31944342 31952092,31950387,31948882,31946576,31945889 Gene ID= ENSG00000088356.5 TPM= 35.32 Transcript Type= protein_coding chr20 32010397 32032178 32010397 32032178 + transcript951.chr20.nic@CCM2L transcript951.chr20.nic protein_coding 32010397,32014904,32017800,32017979,32018943,32022660,32025856,32028995,32029700,32031001 32010484,32015071,32017883,32018162,32019409,32022795,32025919,32029124,32029838,32032178 Gene ID= ENSG00000101331.15 TPM= 6.34 Transcript Type= NA chr20 32109506 32167258 32109506 32167258 + ENST00000398022.6@TM9SF4 ENST00000398022.6 protein_coding 32109506,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295 32109755,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258 Gene ID= ENSG00000101337.15 TPM= 104.68 Transcript Type= protein_coding chr20 32109736 32167258 32109736 32167258 + ENST00000217315.9@TM9SF4 ENST00000217315.9 protein_coding 32109736,32133013,32136074,32141497,32141766,32142982,32145091,32145312,32146785,32149634,32150622,32150800,32155103,32157794,32158451,32159992,32161276,32165295 32110039,32133126,32136173,32141665,32141895,32143105,32145209,32145423,32146855,32149766,32150703,32150875,32155186,32157969,32158514,32160111,32161365,32167258 Gene ID= ENSG00000101337.15 TPM= 5.98 Transcript Type= protein_coding chr20 32192503 32207791 32192503 32207791 - ENST00000246229.4@PLAGL2 ENST00000246229.4 protein_coding 32207641,32201919,32192503 32207791,32202292,32197682 Gene ID= ENSG00000126003.6 TPM= 2.72 Transcript Type= protein_coding chr20 32207857 32238520 32207857 32238520 + transcript973.chr20.nnic@POFUT1 transcript973.chr20.nnic protein_coding 32207857,32215269,32216609,32222633,32228263,32230819,32234473 32208065,32215451,32216721,32222833,32228455,32231061,32238520 Gene ID= ENSG00000101346.13 TPM= 2.72 Transcript Type= NA chr20 32207880 32238667 32207880 32238667 + ENST00000375749.7@POFUT1 ENST00000375749.7 protein_coding 32207880,32210071,32215269,32216609,32228263,32230819,32234473 32208065,32210192,32215451,32216721,32228455,32231061,32238667 Gene ID= ENSG00000101346.13 TPM= 56.14 Transcript Type= protein_coding chr20 32277664 32335011 32277664 32335011 + ENST00000375712.3@KIF3B ENST00000375712.3 protein_coding 32277664,32309713,32316218,32316527,32316756,32326771,32327556,32330141,32331223 32277765,32311181,32316319,32316649,32316874,32326884,32327661,32330319,32335011 Gene ID= ENSG00000101350.7 TPM= 18.11 Transcript Type= protein_coding chr20 32358330 32372239 32358330 32372239 + transcript984.chr20.nic@ASXL1 transcript984.chr20.nic protein_coding 32358330,32366384,32369015,32372164 32358832,32366466,32369123,32372239 Gene ID= ENSG00000171456.16 TPM= 3.62 Transcript Type= NA chr20 32702703 32743455 32702703 32743455 - ENST00000446419.6@COMMD7 ENST00000446419.6 protein_coding 32743308,32728089,32727893,32706704,32706583,32704814,32704440,32704023,32702703 32743455,32728139,32727995,32706760,32706620,32704904,32704489,32704071,32703458 Gene ID= ENSG00000149600.11 TPM= 42.56 Transcript Type= protein_coding chr20 32819893 32850405 32819893 32850405 + ENST00000375571.5@MAPRE1 ENST00000375571.5 protein_coding 32819893,32825925,32833717,32836634,32839735,32846618,32848672 32820028,32826048,32833862,32836841,32839856,32846770,32850405 Gene ID= ENSG00000101367.8 TPM= 77.88 Transcript Type= protein_coding chr20 33358839 33401561 33358839 33401561 - ENST00000346416.6@CDK5RAP1 ENST00000346416.6 protein_coding 33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358839 33401561,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123 Gene ID= ENSG00000101391.20 TPM= 29.88 Transcript Type= protein_coding chr20 33358841 33401533 33358841 33401533 - transcript1001.chr20.nic@CDK5RAP1 transcript1001.chr20.nic protein_coding 33401428,33396761,33395013,33394032,33392142,33387323,33385650,33379461,33372642,33370499,33366859,33360351,33358841 33401533,33397084,33395116,33394066,33392242,33387533,33385770,33379691,33374212,33370629,33367008,33360491,33359123 Gene ID= ENSG00000101391.20 TPM= 2.72 Transcript Type= NA chr20 33358841 33401509 33358841 33401509 - transcript1003.chr20.nic@CDK5RAP1 transcript1003.chr20.nic protein_coding 33401428,33394032,33392142,33387323,33385650,33379461,33374115,33372642,33370499,33366859,33360351,33358841 33401509,33394066,33392242,33387533,33385770,33379691,33374212,33372697,33370629,33367008,33360491,33359123 Gene ID= ENSG00000101391.20 TPM= 2.72 Transcript Type= NA chr20 33407956 33443896 33407956 33443896 - transcript1011.chr20.nnic@SNTA1 transcript1011.chr20.nnic protein_coding 33443311,33438841,33417719,33412575,33412186,33410135,33408701,33407956 33443896,33439026,33417923,33412782,33412426,33410331,33408888,33408599 Gene ID= ENSG00000101400.5 TPM= 6.88 Transcript Type= NA chr20 33407955 33443892 33407955 33443892 - ENST00000217381.2@SNTA1 ENST00000217381.2 protein_coding 33443311,33438841,33417719,33412575,33412296,33410135,33408701,33407955 33443892,33439026,33417923,33412782,33412426,33410331,33408888,33408599 Gene ID= ENSG00000101400.5 TPM= 136.83 Transcript Type= protein_coding chr20 33624713 33645280 33624713 33645280 + transcript1020.chr20.nic@CBFA2T2 transcript1020.chr20.nic protein_coding 33624713,33628350,33629719,33636640,33640341,33644347 33625017,33628435,33629914,33636708,33640531,33645280 Gene ID= ENSG00000078699.21 TPM= 1.81 Transcript Type= NA chr20 33490069 33624236 33490069 33624236 + transcript1021.chr20.nic@CBFA2T2 transcript1021.chr20.nic protein_coding 33490069,33606956,33611094,33619517,33623115 33490301,33607099,33611335,33619606,33624236 Gene ID= ENSG00000078699.21 TPM= 3.62 Transcript Type= NA chr20 33490087 33645541 33490087 33645541 + ENST00000342704.10@CBFA2T2 ENST00000342704.10 protein_coding 33490087,33606956,33611094,33619517,33623115,33624764,33628350,33629719,33636640,33640341,33644347 33490301,33607099,33611335,33619606,33623296,33625017,33628435,33629914,33636708,33640531,33645541 Gene ID= ENSG00000078699.21 TPM= 4.53 Transcript Type= protein_coding chr20 33657087 33674463 33657087 33674463 - ENST00000375238.8@NECAB3 ENST00000375238.8 protein_coding 33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659653,33659497,33658722,33658477,33657942,33657087 33674463,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33659550,33658834,33658554,33658033,33657857 Gene ID= ENSG00000125967.16 TPM= 82.7 Transcript Type= protein_coding chr20 33657088 33674420 33657088 33674420 - ENST00000488489.5@NECAB3 ENST00000488489.5 protein_coding 33674224,33672398,33670684,33669687,33669375,33659885,33659653,33659497,33658722,33658477,33657942,33657088 33674420,33672422,33670781,33669712,33669472,33660395,33659732,33659550,33658834,33658554,33658033,33657857 Gene ID= ENSG00000125967.16 TPM= 11.17 Transcript Type= nonsense_mediated_decay chr20 33657087 33674408 33657087 33674408 - ENST00000246190.10@NECAB3 ENST00000246190.10 protein_coding 33674224,33672398,33670684,33669687,33669375,33660259,33659885,33659497,33658722,33658477,33657942,33657087 33674408,33672422,33670792,33669712,33669472,33660395,33660003,33659732,33658834,33658554,33658033,33657857 Gene ID= ENSG00000125967.16 TPM= 12.98 Transcript Type= protein_coding chr20 33675683 33720288 33675683 33720288 - transcript1028.chr20.nnic@E2F1 transcript1028.chr20.nnic protein_coding 33720095,33714674,33710555,33680326,33679755,33678201,33677426,33677105,33675683 33720288,33714736,33710753,33680416,33679974,33678353,33677540,33677330,33676979 Gene ID= ENSG00000101412.12 TPM= 2.72 Transcript Type= NA chr20 33675685 33720329 33675685 33720329 - transcript1029.chr20.nnic@E2F1 transcript1029.chr20.nnic protein_coding 33720095,33714674,33680326,33679755,33678201,33677426,33677105,33675685 33720329,33714736,33680416,33679974,33678353,33677540,33677330,33676979 Gene ID= ENSG00000101412.12 TPM= 1.81 Transcript Type= NA chr20 33675683 33686382 33675683 33686382 - transcript1031.chr20.nic@E2F1 transcript1031.chr20.nic protein_coding 33686004,33680326,33679755,33678201,33677426,33675683 33686382,33680416,33679974,33678353,33677540,33677330 Gene ID= ENSG00000101412.12 TPM= 2.72 Transcript Type= NA chr20 33675683 33686404 33675683 33686404 - ENST00000343380.5@E2F1 ENST00000343380.5 protein_coding 33686004,33680326,33679755,33678201,33677426,33677105,33675683 33686404,33680416,33679974,33678353,33677540,33677330,33676979 Gene ID= ENSG00000101412.12 TPM= 31.69 Transcript Type= protein_coding chr20 33705946 33720436 33705946 33720436 - transcript1034.chr20.nnic@PXMP4 transcript1034.chr20.nnic protein_coding 33720095,33714674,33710555,33707125,33705946 33720436,33714736,33710753,33707969,33706170 Gene ID= ENSG00000101417.11 TPM= 3.62 Transcript Type= NA chr20 33702754 33720300 33702754 33720300 - ENST00000409299.7@PXMP4 ENST00000409299.7 protein_coding 33720095,33714674,33710555,33702754 33720300,33714736,33710753,33707969 Gene ID= ENSG00000101417.11 TPM= 18.11 Transcript Type= protein_coding chr20 33992488 33994355 33992488 33994355 - ENST00000440595.5@RALY-AS1 ENST00000440595.5 lincRNA 33994205,33993060,33992488 33994355,33993150,33992905 Gene ID= ENSG00000228265.5 TPM= 2.72 Transcript Type= lincRNA chr20 33993778 34080272 33993778 34080272 + transcript1051.chr20.nnic@RALY transcript1051.chr20.nnic protein_coding 33993778,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910 33994131,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080272 Gene ID= ENSG00000125970.11 TPM= 3.62 Transcript Type= NA chr20 33993642 34080272 33993642 34080272 + transcript1054.chr20.nnic@RALY transcript1054.chr20.nnic protein_coding 33993642,34072066,34073563,34075874,34076702,34077028,34078505,34079910 33994131,34072330,34073635,34076040,34076815,34077245,34078553,34080272 Gene ID= ENSG00000125970.11 TPM= 4.53 Transcript Type= NA chr20 33993646 34084884 33993646 34084884 + ENST00000375114.7@RALY ENST00000375114.7 protein_coding 33993646,34031522,34072066,34073563,34075874,34076702,34077028,34078505,34079910 33994131,34031604,34072330,34073635,34076040,34076815,34077245,34078553,34084884 Gene ID= ENSG00000125970.11 TPM= 35.32 Transcript Type= protein_coding chr20 33993722 34080271 33993722 34080271 + ENST00000246194.7@RALY ENST00000246194.7 protein_coding 33993722,34031522,34072066,34073563,34073819,34075874,34076702,34077028,34078505,34079910 33994131,34031604,34072330,34073635,34073866,34076040,34076815,34077245,34078553,34080271 Gene ID= ENSG00000125970.11 TPM= 77.88 Transcript Type= protein_coding chr20 34088298 34112332 34088298 34112332 - ENST00000374980.2@EIF2S2 ENST00000374980.2 protein_coding 34112096,34105368,34103462,34098498,34097416,34096657,34093675,34090517,34088298 34112332,34105545,34103565,34098633,34097516,34096805,34093731,34090602,34089905 Gene ID= ENSG00000125977.6 TPM= 272.72 Transcript Type= protein_coding chr20 34089432 34112279 34089432 34112279 - transcript1061.chr20.nnic@EIF2S2 transcript1061.chr20.nnic protein_coding 34112096,34105368,34103462,34098498,34097416,34096657,34090517,34089432 34112279,34105545,34103565,34098633,34097516,34096805,34090602,34089905 Gene ID= ENSG00000125977.6 TPM= 13.28 Transcript Type= NA chr20 34280270 34303393 34280270 34303393 - transcript1066.chr20.nnic@AHCY transcript1066.chr20.nnic protein_coding 34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34281027,34280270 34303393,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165,34280650 Gene ID= ENSG00000101444.12 TPM= 6.79 Transcript Type= NA chr20 34280267 34303023 34280267 34303023 - transcript1069.chr20.nic@AHCY transcript1069.chr20.nic protein_coding 34301758,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280267 34303023,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165 Gene ID= ENSG00000101444.12 TPM= 3.62 Transcript Type= NA chr20 34280268 34303348 34280268 34303348 - ENST00000217426.6@AHCY ENST00000217426.6 protein_coding 34303243,34295395,34294081,34292358,34291419,34290731,34290551,34290332,34285440,34280268 34303348,34295585,34294156,34292507,34291531,34290938,34290638,34290449,34285634,34281165 Gene ID= ENSG00000101444.12 TPM= 75.61 Transcript Type= protein_coding chr20 34363235 34511393 34363235 34511393 + ENST00000374864.8@ITCH ENST00000374864.8 protein_coding 34363235,34369394,34393791,34408651,34412515,34413742,34424480,34438474,34440155,34442208,34445287,34449411,34457390,34462093,34470048,34471444,34477772,34479630,34480599,34481066,34489266,34489822,34492501,34504331,34507695 34363349,34369470,34393881,34408792,34412639,34413879,34424525,34438631,34440344,34442303,34445461,34449480,34457474,34462221,34470120,34471515,34477860,34479789,34480732,34481206,34489386,34489926,34492597,34504403,34511393 Gene ID= ENSG00000078747.14 TPM= 6.34 Transcript Type= protein_coding chr20 34516409 34540958 34516409 34540958 + ENST00000357156.6@DYNLRB1 ENST00000357156.6 protein_coding 34516409,34526268,34534628,34540581 34516461,34526343,34534795,34540958 Gene ID= ENSG00000125971.16 TPM= 102.33 Transcript Type= protein_coding chr20 34558718 34560345 34558718 34560345 + ENST00000397709.1@MAP1LC3A ENST00000397709.1 protein_coding 34558718,34559208,34559347,34559736,34560172 34558908,34559263,34559453,34559905,34560345 Gene ID= ENSG00000101460.12 TPM= 1.81 Transcript Type= protein_coding chr20 34560543 34605124 34560543 34605124 - transcript1090.chr20.nnic@PIGU transcript1090.chr20.nnic protein_coding 34604866,34588453,34585437,34581548,34575104,34560543 34605124,34588607,34585580,34581672,34575246,34560979 Gene ID= ENSG00000101464.10 TPM= 4.53 Transcript Type= NA chr20 34560542 34677085 34560542 34677085 - ENST00000217446.7@PIGU ENST00000217446.7 protein_coding 34676956,34657180,34645275,34644164,34637876,34634615,34616042,34588453,34585437,34581548,34575104,34560542 34677085,34657244,34645334,34644226,34637985,34634715,34616139,34588607,34585580,34581672,34575246,34560979 Gene ID= ENSG00000101464.10 TPM= 24.45 Transcript Type= protein_coding chr20 34714775 34742689 34714775 34742689 - transcript1092.chr20.nic@NCOA6 transcript1092.chr20.nic protein_coding 34740363,34736690,34732559,34727259,34714775 34742689,34736758,34732595,34727407,34715365 Gene ID= ENSG00000198646.13 TPM= 2.72 Transcript Type= NA chr20 34844720 34872860 34844720 34872860 - ENST00000336431.9@GGT7 ENST00000336431.9 protein_coding 34872647,34863313,34862814,34861445,34860254,34859969,34859443,34856806,34854796,34854531,34852389,34852155,34851231,34849961,34844720 34872860,34863548,34862965,34861562,34860321,34860042,34859639,34856893,34854923,34854619,34852538,34852272,34851368,34850060,34845491 Gene ID= ENSG00000131067.16 TPM= 19.02 Transcript Type= protein_coding chr20 34876547 34927961 34876547 34927961 + transcript1101.chr20.nnic@ACSS2 transcript1101.chr20.nnic protein_coding 34876547,34882794,34913096,34913393,34913753,34914096,34914323,34919435,34920539,34921006,34921330,34921544,34921786,34921963,34923323,34925698,34926105,34926877,34927087 34876823,34882989,34913187,34913496,34913825,34914171,34914437,34919572,34920709,34921139,34921462,34921600,34921866,34921992,34923431,34925766,34926281,34926951,34927961 Gene ID= ENSG00000131069.19 TPM= 6.18 Transcript Type= NA chr20 34876435 34927962 34876435 34927962 + ENST00000360596.6@ACSS2 ENST00000360596.6 protein_coding 34876435,34882794,34913096,34913393,34913753,34914096,34914323,34919435,34920539,34921006,34921330,34921544,34921786,34923323,34925698,34926105,34926877,34927087 34876823,34882989,34913187,34913496,34913825,34914171,34914437,34919572,34920709,34921139,34921462,34921600,34921866,34923431,34925766,34926281,34926951,34927962 Gene ID= ENSG00000131069.19 TPM= 132.96 Transcript Type= protein_coding chr20 34928430 34955817 34928430 34955817 - ENST00000216951.6@GSS ENST00000216951.6 protein_coding 34955727,34951724,34945953,34942931,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430 34955817,34951860,34946098,34943006,34942627,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951 Gene ID= ENSG00000100983.9 TPM= 171.15 Transcript Type= protein_coding chr20 34928430 34955814 34928430 34955814 - transcript1120.chr20.nic@GSS transcript1120.chr20.nic protein_coding 34955727,34951724,34945953,34942488,34941713,34936943,34936763,34935576,34931939,34931336,34929401,34928430 34955814,34951860,34946098,34943006,34941829,34937023,34936840,34935642,34932133,34931417,34929590,34928951 Gene ID= ENSG00000100983.9 TPM= 13.58 Transcript Type= NA chr20 35002405 35092807 35002405 35092807 - transcript1173.chr20.nic@TRPC4AP transcript1173.chr20.nic protein_coding 35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35003410,35002405 35092807,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003283 Gene ID= ENSG00000100991.11 TPM= 13.91 Transcript Type= NA chr20 35002404 35092871 35002404 35092871 - ENST00000252015.2@TRPC4AP ENST00000252015.2 protein_coding 35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404 35092871,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021356,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283 Gene ID= ENSG00000100991.11 TPM= 252.75 Transcript Type= protein_coding chr20 35002404 35092807 35002404 35092807 - ENST00000451813.6@TRPC4AP ENST00000451813.6 protein_coding 35092614,35078046,35069296,35057514,35054976,35049866,35044505,35035123,35021190,35016008,35013008,35010187,35008664,35007550,35006435,35005695,35004458,35003410,35002404 35092807,35078174,35069412,35057571,35055031,35049994,35044712,35035308,35021332,35016139,35013066,35010288,35008747,35007640,35006575,35005803,35004570,35003616,35003283 Gene ID= ENSG00000100991.11 TPM= 94.28 Transcript Type= protein_coding chr20 35115365 35147360 35115365 35147360 - transcript1191.chr20.nnic@EDEM2 transcript1191.chr20.nnic protein_coding 35147152,35146825,35144979,35142373,35137880,35134738,35134105,35131642,35126251,35123890,35118598,35115365 35147360,35146935,35145018,35142478,35138005,35134949,35134155,35131783,35126375,35124034,35118719,35115933 Gene ID= ENSG00000088298.12 TPM= 6.66 Transcript Type= NA chr20 35115365 35147360 35115365 35147360 - transcript1193.chr20.nnic@EDEM2 transcript1193.chr20.nnic protein_coding 35147152,35146825,35142373,35137880,35134738,35134105,35131642,35126251,35123890,35118598,35115365 35147360,35146935,35142478,35138005,35134949,35134155,35131783,35126375,35124034,35118719,35115933 Gene ID= ENSG00000088298.12 TPM= 3.94 Transcript Type= NA chr20 35115357 35147364 35115357 35147364 - ENST00000374492.7@EDEM2 ENST00000374492.7 protein_coding 35147152,35146825,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115357 35147364,35146935,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933 Gene ID= ENSG00000088298.12 TPM= 107.47 Transcript Type= protein_coding chr20 35115364 35147319 35115364 35147319 - ENST00000374491.3@EDEM2 ENST00000374491.3 protein_coding 35147152,35144979,35142373,35137880,35134738,35131642,35126251,35123890,35118598,35115364 35147319,35145018,35142478,35138005,35134949,35131783,35126375,35124034,35118719,35115933 Gene ID= ENSG00000088298.12 TPM= 3.33 Transcript Type= protein_coding chr20 35171711 35177366 35171711 35177366 + transcript1209.chr20.nnic@PROCR transcript1209.chr20.nnic protein_coding 35171711,35172089,35174702,35176168,35176698 35171890,35172224,35174953,35176446,35177366 Gene ID= ENSG00000101000.5 TPM= 5.43 Transcript Type= NA chr20 35172072 35177367 35172072 35177367 + transcript1216.chr20.nnic@PROCR transcript1216.chr20.nnic protein_coding 35172072,35174702,35176837 35172224,35174799,35177367 Gene ID= ENSG00000101000.5 TPM= 1.81 Transcript Type= NA chr20 35172073 35177362 35172073 35177362 + ENST00000216968.4@PROCR ENST00000216968.4 protein_coding 35172073,35174702,35176168,35176698 35172224,35174953,35176446,35177362 Gene ID= ENSG00000101000.5 TPM= 31.69 Transcript Type= protein_coding chr20 35267660 35278127 35267660 35278127 - transcript1217.chr20.nnic@MMP24-AS1 transcript1217.chr20.nnic protein_coding 35278009,35272005,35267660 35278127,35272145,35269023 Gene ID= ENSG00000126005.16 TPM= 3.62 Transcript Type= NA chr20 35276355 35278113 35276355 35278113 - transcript1220.chr20.nic@MMP24-AS1 transcript1220.chr20.nic protein_coding 35278046,35277390,35276355 35278113,35277932,35277297 Gene ID= ENSG00000126005.16 TPM= 8.15 Transcript Type= NA chr20 35276361 35278027 35276361 35278027 - ENST00000435366.2@MMP24-AS1 ENST00000435366.2 protein_coding 35278009,35277390,35276361 35278027,35277932,35277297 Gene ID= ENSG00000126005.16 TPM= 12.68 Transcript Type= nonsense_mediated_decay chr20 35277342 35278129 35277342 35278129 - ENST00000456790.1@MMP24-AS1 ENST00000456790.1 protein_coding 35278009,35277342 35278129,35277932 Gene ID= ENSG00000126005.16 TPM= 7.24 Transcript Type= protein_coding chr20 35226654 35277000 35226654 35277000 + ENST00000246186.7@MMP24 ENST00000246186.7 protein_coding 35226654,35246840,35251905,35254450,35263791,35267205,35269760,35271569,35274272 35226984,35246988,35252021,35254754,35263952,35267419,35269898,35271835,35277000 Gene ID= ENSG00000125966.9 TPM= 4.53 Transcript Type= protein_coding chr20 35276938 35284581 35276938 35284581 - transcript1212.chr20.nnic@EIF6 transcript1212.chr20.nnic protein_coding 35284381,35280654,35279942,35279566,35276938 35284581,35280829,35280118,35279747,35279206 Gene ID= ENSG00000242372.6 TPM= 10.41 Transcript Type= NA chr20 35278911 35284985 35278911 35284985 - ENST00000374450.7@EIF6 ENST00000374450.7 protein_coding 35284726,35284381,35284176,35280654,35279942,35279566,35278911 35284985,35284492,35284261,35280829,35280118,35279747,35279206 Gene ID= ENSG00000242372.6 TPM= 123 Transcript Type= protein_coding chr20 35278911 35284804 35278911 35284804 - ENST00000447927.6@EIF6 ENST00000447927.6 protein_coding 35284726,35284381,35284176,35279942,35279566,35278911 35284804,35284492,35284261,35280118,35279747,35279206 Gene ID= ENSG00000242372.6 TPM= 3.47 Transcript Type= nonsense_mediated_decay chr20 35278911 35284770 35278911 35284770 - ENST00000374443.7@EIF6 ENST00000374443.7 protein_coding 35284726,35284176,35279942,35279566,35278911 35284770,35284492,35280118,35279747,35279206 Gene ID= ENSG00000242372.6 TPM= 1.66 Transcript Type= protein_coding chr20 35302568 35411987 35302568 35411987 - transcript1225.chr20.nic@UQCC1 transcript1225.chr20.nic protein_coding 35411940,35394092,35392236,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302568 35411987,35394196,35392277,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069 Gene ID= ENSG00000101019.21 TPM= 2.72 Transcript Type= NA chr20 35302566 35412141 35302566 35412141 - ENST00000374385.9@UQCC1 ENST00000374385.9 protein_coding 35411940,35394092,35384038,35381918,35374184,35366557,35347164,35314688,35306666,35302566 35412141,35394196,35384133,35382025,35374256,35366614,35347272,35314765,35306779,35304069 Gene ID= ENSG00000101019.21 TPM= 76.97 Transcript Type= protein_coding chr20 35344110 35411974 35344110 35411974 - ENST00000397554.5@UQCC1 ENST00000397554.5 protein_coding 35411940,35394092,35384038,35381918,35374184,35366557,35344110 35411974,35394196,35384133,35382025,35374256,35366614,35347272 Gene ID= ENSG00000101019.21 TPM= 4.53 Transcript Type= protein_coding chr20 35433347 35438243 35433347 35438243 - ENST00000374369.7@GDF5 ENST00000374369.7 protein_coding 35437298,35433347 35438243,35434783 Gene ID= ENSG00000125965.8 TPM= 2.72 Transcript Type= protein_coding chr20 35542021 35557634 35542021 35557634 + ENST00000348547.6@ERGIC3 ENST00000348547.6 protein_coding 35542021,35542323,35542513,35542822,35547412,35548509,35548808,35555044,35556033,35556207,35556973,35557194,35557425 35542185,35542393,35542600,35542941,35547505,35548674,35548865,35555075,35556129,35556271,35557109,35557249,35557634 Gene ID= ENSG00000125991.19 TPM= 388.03 Transcript Type= protein_coding chr20 35617024 35622420 35617024 35622420 + transcript1250.chr20.nic@SPAG4 transcript1250.chr20.nic protein_coding 35617024,35617520,35617779,35618087,35618450,35618612,35618923,35619195,35619579,35620684,35620876 35617240,35617586,35617840,35618130,35618475,35618720,35618998,35619310,35619746,35620773,35622420 Gene ID= ENSG00000061656.9 TPM= 12.22 Transcript Type= NA chr20 35616987 35621043 35616987 35621043 + transcript1255.chr20.nic@SPAG4 transcript1255.chr20.nic protein_coding 35616987,35619195,35619579,35620684,35620876 35618998,35619310,35619746,35620773,35621043 Gene ID= ENSG00000061656.9 TPM= 2.26 Transcript Type= NA chr20 35626031 35664932 35626031 35664932 - transcript1264.chr20.nic@CPNE1 transcript1264.chr20.nic protein_coding 35664760,35658930,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664932,35658982,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 7.98 Transcript Type= NA chr20 35626031 35664910 35626031 35664910 - transcript1266.chr20.nic@CPNE1 transcript1266.chr20.nic protein_coding 35664760,35658930,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664910,35659014,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 5.26 Transcript Type= NA chr20 35626031 35664958 35626031 35664958 - transcript1276.chr20.nic@CPNE1 transcript1276.chr20.nic protein_coding 35664802,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664958,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 39.67 Transcript Type= NA chr20 35626031 35664967 35626031 35664967 - transcript1277.chr20.nic@CPNE1 transcript1277.chr20.nic protein_coding 35664879,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664967,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 7.07 Transcript Type= NA chr20 35626031 35664937 35626031 35664937 - transcript1282.chr20.nic@CPNE1 transcript1282.chr20.nic protein_coding 35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626735,35626031 35664937,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 3.62 Transcript Type= NA chr20 35626031 35664937 35626031 35664937 - transcript1286.chr20.nic@CPNE1 transcript1286.chr20.nic protein_coding 35664760,35632795,35632517,35632311,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664937,35632923,35632696,35632385,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 3.97 Transcript Type= NA chr20 35626031 35664958 35626031 35664958 - transcript1287.chr20.nic@CPNE1 transcript1287.chr20.nic protein_coding 35664802,35632795,35632517,35632311,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664958,35632923,35632696,35632385,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 8.49 Transcript Type= NA chr20 35626066 35664875 35626066 35664875 - ENST00000397442.5@CPNE1 ENST00000397442.5 protein_coding 35664802,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626735,35626066 35664875,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 4.53 Transcript Type= protein_coding chr20 35626044 35664876 35626044 35664876 - ENST00000397443.6@CPNE1 ENST00000397443.6 protein_coding 35664760,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626044 35664876,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 37.86 Transcript Type= protein_coding chr20 35626031 35664886 35626031 35664886 - ENST00000352393.8@CPNE1 ENST00000352393.8 protein_coding 35664760,35658930,35655202,35632795,35632517,35632311,35632163,35631945,35631688,35631492,35631268,35631114,35630901,35630741,35630439,35627280,35626567,35626031 35664886,35658982,35655344,35632923,35632696,35632385,35632234,35632025,35631777,35631578,35631354,35631173,35631034,35630795,35630490,35627413,35626803,35626381 Gene ID= ENSG00000214078.12 TPM= 2.54 Transcript Type= protein_coding chr20 35648925 35664916 35648925 35664916 - ENST00000374114.7@RBM12 ENST00000374114.7 protein_coding 35664760,35658930,35648925 35664916,35659014,35655344 Gene ID= ENSG00000244462.7 TPM= 39.84 Transcript Type= protein_coding chr20 35668964 35699381 35668964 35699381 - transcript1304.chr20.nnic@NFS1 transcript1304.chr20.nnic protein_coding 35699192,35698481,35697684,35696377,35690413,35681888,35680737,35675125,35674512,35674350,35673601,35672755,35668964 35699381,35698590,35697800,35696460,35690565,35681981,35680871,35675202,35674617,35674431,35673684,35672844,35669685 Gene ID= ENSG00000244005.12 TPM= 5.73 Transcript Type= NA chr20 35668983 35699349 35668983 35699349 - ENST00000397425.5@NFS1 ENST00000397425.5 protein_coding 35699310,35698481,35697684,35696377,35690413,35681888,35680737,35675045,35674512,35674350,35673601,35672755,35668983 35699349,35698590,35697800,35696460,35690565,35681981,35680871,35675202,35674617,35674431,35673684,35672844,35669685 Gene ID= ENSG00000244005.12 TPM= 2.72 Transcript Type= protein_coding chr20 35699353 35700984 35699353 35700984 + ENST00000374077.7@ROMO1 ENST00000374077.7 protein_coding 35699353,35699633,35700798 35699456,35699763,35700984 Gene ID= ENSG00000125995.15 TPM= 127.68 Transcript Type= protein_coding chr20 35699451 35700980 35699451 35700980 + ENST00000336695.4@ROMO1 ENST00000336695.4 protein_coding 35699451,35700798 35699763,35700980 Gene ID= ENSG00000125995.15 TPM= 22.64 Transcript Type= protein_coding chr20 35703610 35742312 35703610 35742312 - ENST00000361162.10@RBM39 ENST00000361162.10 protein_coding 35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703610 35742312,35740887,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581 Gene ID= ENSG00000131051.22 TPM= 66.71 Transcript Type= protein_coding chr20 35703608 35742294 35703608 35742294 - transcript1327.chr20.nic@RBM39 transcript1327.chr20.nic protein_coding 35741941,35740824,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703608 35742294,35740887,35740597,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581 Gene ID= ENSG00000131051.22 TPM= 7.54 Transcript Type= NA chr20 35703611 35742274 35703611 35742274 - ENST00000403542.6@RBM39 ENST00000403542.6 protein_coding 35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703611 35742274,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581 Gene ID= ENSG00000131051.22 TPM= 24.9 Transcript Type= nonsense_mediated_decay chr20 35703609 35742236 35703609 35742236 - ENST00000463004.5@RBM39 ENST00000463004.5 protein_coding 35741941,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35703609 35742236,35740887,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581 Gene ID= ENSG00000131051.22 TPM= 8.6 Transcript Type= retained_intron chr20 35704326 35742248 35704326 35742248 - ENST00000444878.5@RBM39 ENST00000444878.5 protein_coding 35741941,35740824,35740525,35738968,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35704326 35742248,35740887,35740597,35739017,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709256,35707201,35705330,35704746,35704581 Gene ID= ENSG00000131051.22 TPM= 4.53 Transcript Type= nonsense_mediated_decay chr20 35704326 35742256 35704326 35742256 - ENST00000429968.5@RBM39 ENST00000429968.5 protein_coding 35741941,35740824,35738968,35734186,35731941,35729462,35729312,35725038,35724570,35721740,35716740,35714185,35713019,35709224,35707120,35705225,35704668,35704326 35742256,35740887,35739017,35734257,35732135,35729527,35729365,35725155,35724722,35721877,35716805,35714389,35713096,35709274,35707201,35705330,35704746,35704581 Gene ID= ENSG00000131051.22 TPM= 1.66 Transcript Type= nonsense_mediated_decay chr20 35771983 35950381 35771983 35950381 + ENST00000374012.7@PHF20 ENST00000374012.7 protein_coding 35771983,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249,35914033,35917484,35927780,35931249,35938697,35940864,35947485 35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913347,35914197,35917662,35927879,35931444,35939108,35941047,35950381 Gene ID= ENSG00000025293.16 TPM= 13.58 Transcript Type= protein_coding chr20 35771990 35950375 35771990 35950375 + transcript1347.chr20.nnic@PHF20 transcript1347.chr20.nnic protein_coding 35771990,35801491,35842573,35847350,35858302,35863013,35869438,35870955,35871650,35899370,35913249,35914033,35917484,35931249,35938697,35940864,35947485 35772079,35801605,35842744,35847434,35858381,35863400,35869551,35871134,35871829,35899648,35913347,35914197,35917662,35931444,35939108,35941047,35950375 Gene ID= ENSG00000025293.16 TPM= 4.53 Transcript Type= NA chr20 35772033 35775058 35772033 35775058 + ENST00000617560.1@PHF20 ENST00000617560.1 protein_coding 35772033,35774488 35772079,35775058 Gene ID= ENSG00000025293.16 TPM= 2.72 Transcript Type= processed_transcript chr20 35953617 35954626 35953617 35954626 - ENST00000305978.6@SCAND1 ENST00000305978.6 protein_coding 35954448,35953617 35954626,35954339 Gene ID= ENSG00000171222.10 TPM= 135.83 Transcript Type= protein_coding chr20 36154637 36232796 36154637 36232796 + transcript1354.chr20.nic@EPB41L1 transcript1354.chr20.nic protein_coding 36154637,36173764,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36209488,36212272,36214357,36218876,36219761,36221864,36222278,36229332 36154896,36173954,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36209898,36212376,36214440,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 8.43 Transcript Type= NA chr20 36154732 36232796 36154732 36232796 + transcript1356.chr20.nic@EPB41L1 transcript1356.chr20.nic protein_coding 36154732,36173764,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36209488,36212272,36218876,36219761,36221864,36222278,36229332 36154896,36173954,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36209898,36212376,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 7.2 Transcript Type= NA chr20 36154578 36232796 36154578 36232796 + transcript1357.chr20.nic@EPB41L1 transcript1357.chr20.nic protein_coding 36154578,36173764,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36212272,36214357,36218876,36219761,36221864,36222278,36229332 36154896,36173954,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36212376,36214440,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 4.81 Transcript Type= NA chr20 36154741 36232796 36154741 36232796 + transcript1360.chr20.nic@EPB41L1 transcript1360.chr20.nic protein_coding 36154741,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36209488,36212272,36214357,36218876,36219761,36221864,36222278,36229332 36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36209898,36212376,36214440,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 7.53 Transcript Type= NA chr20 36154578 36232796 36154578 36232796 + transcript1364.chr20.nic@EPB41L1 transcript1364.chr20.nic protein_coding 36154578,36173764,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36212272,36218876,36219761,36221864,36222278,36229332 36154896,36173954,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36212376,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 4.48 Transcript Type= NA chr20 36154639 36232796 36154639 36232796 + transcript1365.chr20.nic@EPB41L1 transcript1365.chr20.nic protein_coding 36154639,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36209488,36212272,36218876,36219761,36221864,36222278,36229332 36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36209898,36212376,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 5.39 Transcript Type= NA chr20 36154631 36232796 36154631 36232796 + transcript1366.chr20.nic@EPB41L1 transcript1366.chr20.nic protein_coding 36154631,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36212272,36214360,36218876,36219761,36221864,36222278,36229332 36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36212376,36214440,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 5.94 Transcript Type= NA chr20 36154580 36232796 36154580 36232796 + transcript1371.chr20.nic@EPB41L1 transcript1371.chr20.nic protein_coding 36154580,36175551,36177952,36178630,36182272,36185117,36187676,36188347,36190277,36190622,36194212,36197859,36212272,36218876,36219761,36221864,36222278,36229332 36154896,36175715,36178056,36178672,36182347,36185335,36187763,36188499,36190374,36190797,36194360,36198041,36212376,36218962,36219844,36221944,36222394,36232796 Gene ID= ENSG00000088367.21 TPM= 3.58 Transcript Type= NA chr20 36236465 36256933 36236465 36256933 + ENST00000320849.8@AAR2 ENST00000320849.8 protein_coding 36236465,36239821,36244697,36255578 36236503,36240625,36244926,36256933 Gene ID= ENSG00000131043.11 TPM= 85.73 Transcript Type= protein_coding chr20 36236485 36256933 36236485 36256933 + ENST00000373932.3@AAR2 ENST00000373932.3 protein_coding 36236485,36239821,36244697,36255578 36236782,36240625,36244926,36256933 Gene ID= ENSG00000131043.11 TPM= 11.47 Transcript Type= protein_coding chr20 36461468 36528632 36461468 36528632 + transcript1388.chr20.nnic@DLGAP4 transcript1388.chr20.nnic protein_coding 36461468,36496705,36499588,36500199,36524250,36525851,36526802 36462599,36497066,36499676,36500611,36524341,36526006,36528632 Gene ID= ENSG00000080845.17 TPM= 19.92 Transcript Type= NA chr20 36541484 36551447 36541484 36551447 + ENST00000279022.6@MYL9 ENST00000279022.6 protein_coding 36541484,36544859,36548032,36549077 36541561,36545068,36548193,36551447 Gene ID= ENSG00000101335.9 TPM= 679.16 Transcript Type= protein_coding chr20 36541497 36549825 36541497 36549825 + ENST00000346786.2@MYL9 ENST00000346786.2 protein_coding 36541497,36544859,36549077 36541561,36545068,36549825 Gene ID= ENSG00000101335.9 TPM= 81.5 Transcript Type= protein_coding chr20 36573488 36593950 36573488 36593950 + ENST00000373874.6@TGIF2 ENST00000373874.6 protein_coding 36573488,36578741,36590910 36573652,36578966,36593950 Gene ID= ENSG00000118707.9 TPM= 6.64 Transcript Type= protein_coding chr20 36573607 36593950 36573607 36593950 + ENST00000373872.8@TGIF2 ENST00000373872.8 protein_coding 36573607,36578741,36590910 36573745,36578966,36593950 Gene ID= ENSG00000118707.9 TPM= 7.54 Transcript Type= protein_coding chr20 36574554 36593945 36574554 36593945 + ENST00000611732.4@TGIF2 ENST00000611732.4 protein_coding 36574554,36578741,36590910 36574635,36578966,36593945 Gene ID= ENSG00000118707.9 TPM= 4.83 Transcript Type= protein_coding chr20 36605734 36612557 36605734 36612557 + ENST00000344795.7@C20orf24 ENST00000344795.7 protein_coding 36605734,36607715,36609601,36612010 36606065,36607818,36609730,36612557 Gene ID= ENSG00000101084.17 TPM= 83.76 Transcript Type= protein_coding chr20 36605789 36612557 36605789 36612557 + ENST00000483815.5@C20orf24 ENST00000483815.5 protein_coding 36605789,36607715,36607890,36609601,36612010 36606065,36607818,36608000,36609730,36612557 Gene ID= ENSG00000101084.17 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr20 36605822 36612557 36605822 36612557 + ENST00000342422.3@C20orf24 ENST00000342422.3 protein_coding 36605822,36607715,36612010 36606065,36607818,36612557 Gene ID= ENSG00000101084.17 TPM= 1.81 Transcript Type= protein_coding chr20 36605785 36612557 36605785 36612557 + ENST00000492721.5@C20orf24 ENST00000492721.5 protein_coding 36605785,36607715,36607890,36612010 36606065,36607818,36608000,36612557 Gene ID= ENSG00000101084.17 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr20 36651766 36746078 36651766 36746078 - ENST00000349004.5@NDRG3 ENST00000349004.5 protein_coding 36746045,36721679,36706972,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766 36746078,36721783,36707007,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701 Gene ID= ENSG00000101079.20 TPM= 154.85 Transcript Type= protein_coding chr20 36651766 36746067 36651766 36746067 - ENST00000359675.6@NDRG3 ENST00000359675.6 protein_coding 36746045,36721679,36688679,36687492,36684413,36682518,36680816,36671341,36666289,36665236,36665046,36660337,36656497,36656360,36651766 36746067,36721783,36688784,36687612,36684475,36682578,36680902,36671397,36666392,36665301,36665097,36660384,36656532,36656411,36653701 Gene ID= ENSG00000101079.20 TPM= 5.43 Transcript Type= protein_coding chr20 36751795 36773815 36751795 36773815 - ENST00000373750.8@DSN1 ENST00000373750.8 protein_coding 36773662,36771425,36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795 36773815,36771473,36771193,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897 Gene ID= ENSG00000149636.15 TPM= 9.06 Transcript Type= protein_coding chr20 36751796 36773796 36751796 36773796 - transcript1430.chr20.nic@DSN1 transcript1430.chr20.nic protein_coding 36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751796 36773796,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897 Gene ID= ENSG00000149636.15 TPM= 1.81 Transcript Type= NA chr20 36751795 36773760 36751795 36773760 - ENST00000448110.6@DSN1 ENST00000448110.6 protein_coding 36773662,36770873,36767969,36766769,36762461,36758558,36758087,36755682,36754763,36751795 36773760,36771193,36768042,36766841,36762548,36758617,36758161,36755829,36754850,36752897 Gene ID= ENSG00000149636.15 TPM= 4.53 Transcript Type= protein_coding chr20 36890203 36951725 36890203 36951725 - transcript1437.chr20.nic@SAMHD1 transcript1437.chr20.nic protein_coding 36951436,36946738,36941039,36935029,36930760,36927182,36919364,36916949,36916722,36912461,36911218,36905364,36904157,36897822,36890203 36951725,36946804,36941111,36935189,36930875,36927252,36919519,36917049,36916830,36912552,36911333,36905503,36904249,36897959,36893066 Gene ID= ENSG00000101347.8 TPM= 19.92 Transcript Type= NA chr20 36996349 37095995 36996349 37095995 - ENST00000373664.7@RBL1 ENST00000373664.7 protein_coding 37095773,37088989,37067986,37067233,37066993,37066724,37065424,37062084,37061103,37056146,37055553,37047053,37044086,37040153,37035242,37032665,37022650,37020659,37018279,37007411,37003702,36996349 37095995,37089122,37068186,37067297,37067121,37066884,37065473,37062270,37061269,37056258,37055656,37047190,37044250,37040285,37035508,37032876,37022826,37020730,37018369,37007559,37003866,36998929 Gene ID= ENSG00000080839.11 TPM= 2.72 Transcript Type= protein_coding chr20 37179046 37241623 37179046 37241623 + ENST00000237530.10@RPN2 ENST00000237530.10 protein_coding 37179046,37184180,37198397,37199050,37203885,37204767,37207273,37210047,37213760,37223878,37225688,37228550,37229973,37232296,37234020,37236580,37241303 37179369,37184373,37198492,37199225,37203960,37204901,37207449,37210165,37213865,37223969,37225802,37228744,37230059,37232391,37234095,37236709,37241623 Gene ID= ENSG00000118705.16 TPM= 716.29 Transcript Type= protein_coding chr20 37289653 37317258 37289653 37317258 + transcript1467.chr20.nnic@MANBAL transcript1467.chr20.nnic protein_coding 37289653,37297347,37298763,37301208,37316308 37289686,37297534,37298879,37301413,37317258 Gene ID= ENSG00000101363.12 TPM= 16.68 Transcript Type= NA chr20 37289639 37317258 37289639 37317258 + transcript1468.chr20.nnic@MANBAL transcript1468.chr20.nnic protein_coding 37289639,37298763,37301208,37316308 37289686,37298879,37301413,37317258 Gene ID= ENSG00000101363.12 TPM= 41.13 Transcript Type= NA chr20 37289638 37317260 37289638 37317260 + ENST00000373606.7@MANBAL ENST00000373606.7 protein_coding 37289638,37301208,37316308 37289686,37301413,37317260 Gene ID= ENSG00000101363.12 TPM= 23.32 Transcript Type= protein_coding chr20 37289663 37317260 37289663 37317260 + ENST00000397152.7@MANBAL ENST00000397152.7 protein_coding 37289663,37297296,37298763,37301208,37316308 37289686,37297534,37298879,37301413,37317260 Gene ID= ENSG00000101363.12 TPM= 13.96 Transcript Type= protein_coding chr20 37345842 37405422 37345842 37405422 + transcript1473.chr20.nnic@SRC transcript1473.chr20.nnic protein_coding 37345842,37347118,37365204,37382619,37384150,37386075,37393895,37394174,37396162,37397699,37400115,37401602,37402435,37402749,37403171 37346255,37347236,37365277,37382786,37384403,37386174,37393993,37394277,37396311,37397854,37400294,37401678,37402588,37402880,37405422 Gene ID= ENSG00000197122.11 TPM= 15.39 Transcript Type= NA chr20 37346109 37405422 37346109 37405422 + transcript1478.chr20.nnic@SRC transcript1478.chr20.nnic protein_coding 37346109,37365204,37384150,37386075,37393895,37394174,37396162,37397699,37400115,37401602,37402435,37402749,37403171 37346255,37365277,37384403,37386174,37393993,37394277,37396311,37397854,37400294,37401678,37402588,37402880,37405422 Gene ID= ENSG00000197122.11 TPM= 9.96 Transcript Type= NA chr20 37383606 37405422 37383606 37405422 + transcript1480.chr20.nnic@SRC transcript1480.chr20.nnic protein_coding 37383606,37384150,37386075,37393895,37394174,37396162,37397699,37400115,37401602,37402435,37402749,37403171 37383674,37384403,37386174,37393993,37394277,37396311,37397854,37400294,37401678,37402588,37402880,37405422 Gene ID= ENSG00000197122.11 TPM= 9.96 Transcript Type= NA chr20 37346112 37387802 37346112 37387802 + transcript1484.chr20.nnic@SRC transcript1484.chr20.nnic protein_coding 37346112,37365204,37382619,37384150,37386075,37387431 37346255,37365277,37382786,37384403,37386174,37387802 Gene ID= ENSG00000197122.11 TPM= 1.81 Transcript Type= NA chr20 37383595 37387802 37383595 37387802 + transcript1485.chr20.nnic@SRC transcript1485.chr20.nnic protein_coding 37383595,37384150,37386075,37387431 37383702,37384403,37386174,37387802 Gene ID= ENSG00000197122.11 TPM= 2.72 Transcript Type= NA chr20 37517418 37527931 37517418 37527931 - ENST00000414542.6@BLCAP ENST00000414542.6 protein_coding 37527793,37521319,37517418 37527931,37521451,37519350 Gene ID= ENSG00000166619.12 TPM= 5.13 Transcript Type= protein_coding chr20 37517417 37527732 37517417 37527732 - ENST00000397137.5@BLCAP ENST00000397137.5 protein_coding 37527631,37517417 37527732,37519350 Gene ID= ENSG00000166619.12 TPM= 4.23 Transcript Type= protein_coding chr20 37517417 37527931 37517417 37527931 - ENST00000373537.6@BLCAP ENST00000373537.6 protein_coding 37527793,37517417 37527931,37519350 Gene ID= ENSG00000166619.12 TPM= 129.19 Transcript Type= protein_coding chr20 37694006 37872129 37694006 37872129 + ENST00000361383.10@CTNNBL1 ENST00000361383.10 protein_coding 37694006,37732879,37737378,37746468,37757559,37765197,37767953,37777345,37777654,37779187,37802867,37840102,37842339,37859899,37860272,37871925 37694152,37733067,37737484,37746607,37757656,37765290,37768044,37777417,37777712,37779335,37803048,37840199,37842419,37860036,37860344,37872129 Gene ID= ENSG00000132792.18 TPM= 57.95 Transcript Type= protein_coding chr20 37983007 38033468 37983007 38033468 - ENST00000373447.7@TTI1 ENST00000373447.7 protein_coding 38033404,38011515,38006197,38002628,37999188,37996749,37996375,37983007 38033468,38013857,38006397,38002776,37999328,37996953,37996462,37983639 Gene ID= ENSG00000101407.12 TPM= 31.69 Transcript Type= protein_coding chr20 38033546 38092366 38033546 38092366 + ENST00000373433.8@RPRD1B ENST00000373433.8 protein_coding 38033546,38040435,38048348,38057532,38059394,38066081,38089726 38034098,38040564,38048481,38057644,38059520,38066256,38092366 Gene ID= ENSG00000101413.11 TPM= 24.45 Transcript Type= protein_coding chr20 38128459 38165268 38128459 38165268 - transcript1516.chr20.nnic@TGM2 transcript1516.chr20.nnic protein_coding 38165189,38161420,38155847,38150939,38147973,38146717,38142064,38141282,38139412,38138113,38132340,38131093,38128459 38165268,38161599,38156089,38151057,38148089,38146894,38142199,38141385,38139654,38138385,38132500,38131229,38130369 Gene ID= ENSG00000198959.11 TPM= 123.15 Transcript Type= NA chr20 38137950 38165282 38137950 38165282 - ENST00000468262.5@TGM2 ENST00000468262.5 protein_coding 38165189,38161420,38155847,38150939,38147961,38146717,38142064,38141282,38139412,38137950 38165282,38161599,38156089,38151057,38148089,38146894,38142199,38141385,38139654,38138385 Gene ID= ENSG00000198959.11 TPM= 1.81 Transcript Type= retained_intron chr20 38446724 38450921 38446724 38450921 + ENST00000432153.5@SNHG11 ENST00000432153.5 processed_transcript 38446724,38447466,38447930,38448662,38450336,38450533 38447012,38447623,38448093,38448730,38450447,38450921 Gene ID= ENSG00000174365.19 TPM= 3.62 Transcript Type= lincRNA chr20 38446710 38450921 38446710 38450921 + ENST00000359074.8@SNHG11 ENST00000359074.8 processed_transcript 38446710,38447466,38448662,38450336,38450533 38447012,38447623,38448730,38450447,38450921 Gene ID= ENSG00000174365.19 TPM= 3.62 Transcript Type= lincRNA chr20 38472816 38578861 38472816 38578861 + ENST00000262879.10@RALGAPB ENST00000262879.10 protein_coding 38472816,38488403,38492930,38497353,38499447,38509077,38516192,38517506,38517784,38521497,38524778,38525404,38525895,38531167,38532730,38535074,38539776,38541041,38546243,38548689,38551071,38553867,38558295,38562532,38565359,38567096,38569888,38570769,38574150,38574774 38473069,38488618,38493132,38497516,38499633,38509208,38516370,38517654,38518000,38521698,38524945,38525518,38526042,38531231,38532859,38535207,38539958,38541192,38546430,38548795,38551223,38554076,38558453,38562697,38565478,38567232,38569996,38570847,38574298,38578861 Gene ID= ENSG00000170471.14 TPM= 8.6 Transcript Type= protein_coding chr20 38472816 38578859 38472816 38578859 + ENST00000397042.7@RALGAPB ENST00000397042.7 protein_coding 38472816,38488403,38492930,38497353,38499447,38509077,38516192,38517506,38517784,38521497,38524778,38525404,38525895,38531167,38532730,38535086,38539776,38541041,38546243,38548689,38551071,38553867,38558295,38562532,38565356,38567096,38569888,38570769,38574150,38574774 38473069,38488618,38493132,38497516,38499633,38509208,38516370,38517654,38518000,38521698,38524945,38525518,38526042,38531231,38532859,38535207,38539958,38541192,38546430,38548795,38551223,38554076,38558453,38562697,38565478,38567232,38569996,38570847,38574298,38578859 Gene ID= ENSG00000170471.14 TPM= 4.07 Transcript Type= protein_coding chr20 38748437 38772203 38748437 38772203 + transcript1534.chr20.nnic@ACTR5 transcript1534.chr20.nnic protein_coding 38748437,38750010,38752131,38754957,38755857,38765402,38766257,38767464,38771559 38748853,38750239,38752300,38755174,38756039,38765518,38766377,38767596,38772203 Gene ID= ENSG00000101442.9 TPM= 3.62 Transcript Type= NA chr20 38748437 38772190 38748437 38772190 + transcript1535.chr20.nic@ACTR5 transcript1535.chr20.nic protein_coding 38748437,38750010,38752131,38754957,38755857,38765402,38767464,38771559 38748853,38750239,38752300,38755174,38756039,38766377,38767596,38772190 Gene ID= ENSG00000101442.9 TPM= 3.62 Transcript Type= NA chr20 38748442 38772520 38748442 38772520 + ENST00000243903.5@ACTR5 ENST00000243903.5 protein_coding 38748442,38750010,38752131,38754957,38755857,38765402,38766238,38767464,38771559 38748853,38750239,38752300,38755174,38756039,38765518,38766377,38767596,38772520 Gene ID= ENSG00000101442.9 TPM= 15.39 Transcript Type= protein_coding chr20 38805705 38923024 38805705 38923024 + ENST00000299824.5@PPP1R16B ENST00000299824.5 protein_coding 38805705,38835825,38889595,38895565,38900581,38902668,38905969,38906979,38907806,38908028,38918157 38805792,38836175,38889665,38895710,38900684,38902792,38906094,38907054,38907935,38908193,38923024 Gene ID= ENSG00000101445.9 TPM= 7.24 Transcript Type= protein_coding chr20 38962335 39039723 38962335 39039723 + ENST00000252011.7@DHX35 ENST00000252011.7 protein_coding 38962335,38969081,38972559,38983699,38988813,38991454,38992356,38994821,39001730,39002772,39003749,39006146,39010280,39014880,39018804,39021841,39023690,39025230,39028418,39030704,39034206,39038499 38962407,38969214,38972651,38983776,38988917,38991515,38992425,38994880,39001842,39002868,39003907,39006356,39010404,39014934,39018899,39021935,39023767,39025359,39028499,39030775,39034317,39039723 Gene ID= ENSG00000101452.14 TPM= 10.87 Transcript Type= protein_coding chr20 41028818 41124487 41028818 41124487 + ENST00000361337.2@TOP1 ENST00000361337.2 protein_coding 41028818,41029431,41061394,41076171,41077582,41080085,41081165,41084462,41092472,41097220,41098215,41100056,41101209,41112782,41113970,41115371,41116278,41118169,41121696,41122006,41123195 41029100,41029455,41061490,41076294,41077637,41080180,41081240,41084568,41092587,41097341,41098337,41100243,41101353,41112925,41114155,41115439,41116392,41118296,41121790,41122155,41124487 Gene ID= ENSG00000198900.5 TPM= 39.84 Transcript Type= protein_coding chr20 41136960 41175721 41136960 41175721 + ENST00000244007.7@PLCG1 ENST00000244007.7 protein_coding 41136960,41137521,41159606,41159870,41160106,41162452,41162642,41162958,41163203,41163378,41163715,41163921,41164081,41164933,41165245,41165450,41165639,41166194,41166476,41166679,41167852,41168767,41169079,41169457,41170112,41172193,41172421,41172729,41173420,41173652,41173923,41174124,41174467 41137035,41137858,41159758,41159963,41160153,41162536,41162725,41162992,41163275,41163479,41163833,41164006,41164201,41165101,41165367,41165551,41165826,41166394,41166595,41166859,41167929,41168870,41169175,41169526,41170269,41172289,41172645,41172877,41173534,41173813,41174011,41174311,41175721 Gene ID= ENSG00000124181.14 TPM= 9.96 Transcript Type= protein_coding chr20 41137237 41177626 41137237 41177626 + ENST00000373271.5@PLCG1 ENST00000373271.5 protein_coding 41137237,41159606,41159870,41160106,41162452,41162642,41162958,41163203,41163378,41163715,41163921,41164081,41164933,41165245,41165450,41165639,41166194,41166476,41166679,41167852,41168767,41169079,41169457,41170112,41172193,41172421,41172729,41173420,41173652,41173923,41174127,41174467 41137858,41159758,41159963,41160153,41162536,41162725,41162992,41163275,41163479,41163833,41164006,41164201,41165101,41165367,41165551,41165826,41166394,41166595,41166859,41167929,41168870,41169175,41169526,41170269,41172289,41172645,41172877,41173534,41173813,41174011,41174311,41177626 Gene ID= ENSG00000124181.14 TPM= 7.24 Transcript Type= protein_coding chr20 41178474 41317776 41178474 41317776 - transcript1553.chr20.nic@ZHX3 transcript1553.chr20.nic protein_coding 41317509,41268990,41202057,41178474 41317776,41269083,41205066,41185201 Gene ID= ENSG00000174306.21 TPM= 13.58 Transcript Type= NA chr20 41178448 41204041 41178448 41204041 - ENST00000421422.1@ZHX3 ENST00000421422.1 protein_coding 41202057,41201286,41178448 41204041,41201384,41185201 Gene ID= ENSG00000174306.21 TPM= 2.72 Transcript Type= protein_coding chr20 41340821 41360581 41340821 41360581 + transcript1557.chr20.nnic@LPIN3 transcript1557.chr20.nnic protein_coding 41340821,41345796,41347552,41348619,41349089,41349774,41350055,41351821,41352060,41352798,41354645,41354820,41355896,41357040,41357882,41358439,41358722,41359509 41341002,41345995,41347647,41348887,41349172,41349894,41350397,41351920,41352699,41352867,41354737,41354863,41356034,41357447,41358351,41358542,41358915,41360581 Gene ID= ENSG00000132793.11 TPM= 2.72 Transcript Type= NA chr20 41402101 41618494 41402101 41618494 - ENST00000373233.7@CHD6 ENST00000373233.7 protein_coding 41618340,41551305,41533050,41514805,41512846,41499295,41498168,41497384,41493858,41493538,41491698,41489778,41488428,41487665,41484352,41483309,41473322,41457264,41455800,41454626,41452740,41451826,41450946,41447882,41445665,41440000,41437274,41426093,41425178,41423492,41420508,41417198,41416588,41415186,41413324,41412144,41402101 41618494,41551360,41533570,41514952,41512995,41499357,41498226,41497501,41493944,41493672,41491819,41490021,41488604,41487808,41484607,41483519,41473517,41457428,41455979,41454736,41452942,41452025,41451105,41447971,41445768,41440129,41437334,41426153,41425394,41423700,41422079,41417349,41416794,41415638,41413515,41412263,41405489 Gene ID= ENSG00000124177.14 TPM= 9.06 Transcript Type= protein_coding chr20 43514413 43541895 43514413 43541895 + ENST00000373135.7@L3MBTL1 ENST00000373135.7 protein_coding 43514413,43515009,43515292,43516093,43528657,43529264,43530284,43530798,43532773,43533342,43534008,43534284,43534828,43535837,43536097,43536409,43540151,43540753,43540934 43514776,43515159,43515415,43516177,43528745,43529368,43530419,43530889,43532924,43533418,43534093,43534394,43534942,43535936,43536294,43536458,43540308,43540815,43541895 Gene ID= ENSG00000185513.14 TPM= 2.72 Transcript Type= protein_coding chr20 43590957 43647224 43590957 43647224 + transcript1575.chr20.nic@IFT52 transcript1575.chr20.nic protein_coding 43590957,43594693,43596435,43603760,43604183,43605002,43613850,43618243,43618940,43620857,43623891,43635926,43637145,43642479,43646936 43591054,43594817,43596522,43603889,43604258,43605073,43613976,43618353,43619026,43620925,43624045,43636013,43637253,43642624,43647224 Gene ID= ENSG00000101052.12 TPM= 1.81 Transcript Type= NA chr20 43590960 43647224 43590960 43647224 + transcript1576.chr20.nnic@IFT52 transcript1576.chr20.nnic protein_coding 43590960,43594693,43596435,43603760,43604183,43605002,43613850,43618243,43618940,43620857,43623891,43635926,43637145,43642479,43646936 43591054,43594817,43596522,43603889,43604258,43605216,43613976,43618353,43619026,43620925,43624045,43636013,43637253,43642624,43647224 Gene ID= ENSG00000101052.12 TPM= 2.72 Transcript Type= NA chr20 43590931 43647296 43590931 43647296 + ENST00000373030.7@IFT52 ENST00000373030.7 protein_coding 43590931,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936 43591054,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647296 Gene ID= ENSG00000101052.12 TPM= 35.77 Transcript Type= protein_coding chr20 43590990 43647222 43590990 43647222 + ENST00000373039.4@IFT52 ENST00000373039.4 protein_coding 43590990,43594693,43596435,43603760,43604183,43605002,43613850,43618940,43620857,43623891,43635926,43637145,43642479,43646936 43591029,43594817,43596522,43603889,43604258,43605073,43613976,43619026,43620925,43624045,43636013,43637253,43642624,43647222 Gene ID= ENSG00000101052.12 TPM= 1.36 Transcript Type= protein_coding chr20 44111695 44166597 44111695 44166597 - transcript1585.chr20.nnic@JPH2 transcript1585.chr20.nnic protein_coding 44166477,44159618,44118505,44115665,44114782,44111695 44166597,44160407,44118623,44116386,44114876,44113503 Gene ID= ENSG00000149596.6 TPM= 2.72 Transcript Type= NA chr20 44111695 44187578 44111695 44187578 - ENST00000372980.3@JPH2 ENST00000372980.3 protein_coding 44186327,44159618,44118505,44115665,44114782,44111695 44187578,44160407,44118623,44116386,44114876,44113503 Gene ID= ENSG00000149596.6 TPM= 10.87 Transcript Type= protein_coding chr20 44111697 44187222 44111697 44187222 - transcript1588.chr20.nic@JPH2 transcript1588.chr20.nic protein_coding 44186327,44159618,44118505,44115665,44111697 44187222,44160407,44118623,44116386,44114876 Gene ID= ENSG00000149596.6 TPM= 2.72 Transcript Type= NA chr20 44196496 44210791 44196496 44210791 - ENST00000255174.2@OSER1 ENST00000255174.2 protein_coding 44210696,44206881,44202961,44196496 44210791,44206998,44203074,44197739 Gene ID= ENSG00000132823.10 TPM= 40.75 Transcript Type= protein_coding chr20 44211050 44225985 44211050 44225985 + transcript1590.chr20.nic@OSER1-AS1 transcript1590.chr20.nic lincRNA 44211050,44214888,44217367,44223719,44224821 44211356,44215003,44217682,44223872,44225985 Gene ID= ENSG00000223891.5 TPM= 2.04 Transcript Type= NA chr20 44211050 44225985 44211050 44225985 + transcript1596.chr20.nic@OSER1-AS1 transcript1596.chr20.nic lincRNA 44211050,44214888,44224821 44211356,44215003,44225985 Gene ID= ENSG00000223891.5 TPM= 3.85 Transcript Type= NA chr20 44210960 44226027 44210960 44226027 + ENST00000439943.5@OSER1-AS1 ENST00000439943.5 lincRNA 44210960,44214888,44224821 44211077,44215003,44226027 Gene ID= ENSG00000223891.5 TPM= 2.04 Transcript Type= lincRNA chr20 44211082 44226027 44211082 44226027 + ENST00000442383.1@OSER1-AS1 ENST00000442383.1 lincRNA 44211082,44224821 44211356,44226027 Gene ID= ENSG00000223891.5 TPM= 2.94 Transcript Type= lincRNA chr20 44302839 44311243 44302839 44311243 - transcript1602.chr20.nnic@FITM2 transcript1602.chr20.nnic protein_coding 44310976,44306166,44302839 44311243,44307240,44305582 Gene ID= ENSG00000197296.5 TPM= 9.96 Transcript Type= NA chr20 44302841 44311190 44302841 44311190 - transcript1606.chr20.nnic@FITM2 transcript1606.chr20.nnic protein_coding 44310976,44306251,44302841 44311190,44307240,44305580 Gene ID= ENSG00000197296.5 TPM= 1.81 Transcript Type= NA chr20 44302838 44311169 44302838 44311169 - ENST00000396825.3@FITM2 ENST00000396825.3 protein_coding 44310976,44302838 44311169,44307240 Gene ID= ENSG00000197296.5 TPM= 7.24 Transcript Type= protein_coding chr20 44475886 44494603 44475886 44494603 + ENST00000262605.8@TTPAL ENST00000262605.8 protein_coding 44475886,44479985,44484337,44486596,44489263 44475991,44480444,44484530,44486706,44494603 Gene ID= ENSG00000124120.10 TPM= 5.43 Transcript Type= protein_coding chr20 44496224 44522085 44496224 44522085 - ENST00000255175.5@SERINC3 ENST00000255175.5 protein_coding 44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44500258,44496224 44522085,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434,44496355 Gene ID= ENSG00000132824.13 TPM= 11.77 Transcript Type= protein_coding chr20 44497431 44522109 44497431 44522109 - ENST00000342374.4@SERINC3 ENST00000342374.4 protein_coding 44521913,44513879,44512801,44511289,44509891,44506827,44504801,44503815,44501073,44497431 44522109,44514040,44512994,44511368,44510028,44506996,44504891,44503995,44501300,44500434 Gene ID= ENSG00000132824.13 TPM= 445.53 Transcript Type= protein_coding chr20 44531963 44619044 44531963 44619044 + transcript1629.chr20.nnic@PKIG transcript1629.chr20.nnic protein_coding 44531963,44589797,44614534,44618285 44532400,44589866,44614707,44619044 Gene ID= ENSG00000168734.13 TPM= 20.22 Transcript Type= NA chr20 44531785 44619037 44531785 44619037 + ENST00000372894.7@PKIG ENST00000372894.7 protein_coding 44531785,44589797,44614534,44618285 44531978,44589866,44614707,44619037 Gene ID= ENSG00000168734.13 TPM= 109.87 Transcript Type= protein_coding chr20 44582549 44619037 44582549 44619037 + ENST00000372886.5@PKIG ENST00000372886.5 protein_coding 44582549,44589797,44614534,44618285 44582731,44589866,44614707,44619037 Gene ID= ENSG00000168734.13 TPM= 26.56 Transcript Type= protein_coding chr20 44619522 44651742 44619522 44651742 - ENST00000372874.8@ADA ENST00000372874.8 protein_coding 44651575,44636227,44629047,44626456,44625569,44624202,44623007,44622829,44622588,44621018,44620299,44619522 44651742,44636288,44629169,44626599,44625684,44624329,44623078,44622930,44622652,44621147,44620401,44619847 Gene ID= ENSG00000196839.12 TPM= 14.49 Transcript Type= protein_coding chr20 44714834 44728729 44714834 44728729 + transcript1643.chr20.nnic@WISP2 transcript1643.chr20.nnic protein_coding 44714834,44715345,44719897,44724738,44727087 44715161,44715450,44720113,44724992,44728729 Gene ID= ENSG00000064205.10 TPM= 17.27 Transcript Type= NA chr20 44714863 44728729 44714863 44728729 + transcript1647.chr20.nnic@WISP2 transcript1647.chr20.nnic protein_coding 44714863,44715366,44724738,44727087 44715161,44715450,44724992,44728729 Gene ID= ENSG00000064205.10 TPM= 3.83 Transcript Type= NA chr20 44714844 44727811 44714844 44727811 + ENST00000372868.6@WISP2 ENST00000372868.6 protein_coding 44714844,44715366,44719897,44724738,44727087 44715161,44715450,44720113,44724992,44727811 Gene ID= ENSG00000064205.10 TPM= 50.92 Transcript Type= protein_coding chr20 44715245 44727811 44715245 44727811 + ENST00000190983.4@WISP2 ENST00000190983.4 protein_coding 44715245,44719897,44724738,44727087 44715450,44720113,44724992,44727811 Gene ID= ENSG00000064205.10 TPM= 13.79 Transcript Type= protein_coding chr20 44745780 44752313 44745780 44752313 + ENST00000372861.4@KCNK15 ENST00000372861.4 protein_coding 44745780,44750129 44746193,44752313 Gene ID= ENSG00000124249.6 TPM= 10.87 Transcript Type= protein_coding chr20 44885676 44908532 44885676 44908532 + ENST00000353703.8@YWHAB ENST00000353703.8 protein_coding 44885676,44901531,44903993,44904968,44906001,44906382 44885886,44901833,44904116,44905131,44906096,44908532 Gene ID= ENSG00000166913.12 TPM= 375.8 Transcript Type= protein_coding chr20 44885711 44908532 44885711 44908532 + ENST00000372839.7@YWHAB ENST00000372839.7 protein_coding 44885711,44887648,44901531,44903993,44904968,44906001,44906382 44885886,44887742,44901833,44904116,44905131,44906096,44908532 Gene ID= ENSG00000166913.12 TPM= 38.94 Transcript Type= protein_coding chr20 44942130 44960486 44942130 44960486 - ENST00000372813.3@TOMM34 ENST00000372813.3 protein_coding 44960207,44956386,44955068,44951833,44948730,44943453,44942130 44960486,44956485,44955220,44952002,44948877,44943579,44943213 Gene ID= ENSG00000025772.7 TPM= 122.55 Transcript Type= protein_coding chr20 44942127 44960472 44942127 44960472 - transcript1662.chr20.nnic@TOMM34 transcript1662.chr20.nnic protein_coding 44960207,44956386,44955068,44951833,44943453,44942127 44960472,44956485,44955220,44952002,44943579,44943213 Gene ID= ENSG00000025772.7 TPM= 7.54 Transcript Type= NA chr20 44966474 45079959 44966474 45079959 + ENST00000372806.7@STK4 ENST00000372806.7 protein_coding 44966474,44972078,44978443,44981829,44987132,44995090,44997169,45000392,45001167,45024973,45075018 44966603,44972158,44978571,44981943,44987296,44995257,44997306,45000520,45001353,45025130,45079959 Gene ID= ENSG00000101109.11 TPM= 11.77 Transcript Type= protein_coding chr20 45092310 45101112 45092310 45101112 - ENST00000306117.5@KCNS1 ENST00000306117.5 protein_coding 45100921,45100160,45099161,45097662,45092310 45101112,45100361,45099239,45098695,45095340 Gene ID= ENSG00000124134.8 TPM= 2.72 Transcript Type= protein_coding chr20 45325291 45348428 45325291 45348428 - transcript1667.chr20.nnic@SDC4 transcript1667.chr20.nnic protein_coding 45348325,45335782,45333023,45330366,45326806,45325291 45348428,45335920,45333069,45330564,45327415,45325358 Gene ID= ENSG00000124145.6 TPM= 2.72 Transcript Type= NA chr20 45325288 45348424 45325288 45348424 - ENST00000372733.3@SDC4 ENST00000372733.3 protein_coding 45348325,45335782,45333023,45330366,45325288 45348424,45335920,45333069,45330564,45327415 Gene ID= ENSG00000124145.6 TPM= 67.01 Transcript Type= protein_coding chr20 45363028 45369215 45363028 45369215 + ENST00000243918.9@SYS1 ENST00000243918.9 protein_coding 45363028,45363529,45365619,45366875 45363315,45363693,45365686,45369215 Gene ID= ENSG00000204070.9 TPM= 67.01 Transcript Type= protein_coding chr20 45363139 45376798 45363139 45376798 + ENST00000426004.5@SYS1 ENST00000426004.5 protein_coding 45363139,45363529,45365619,45374294 45363315,45363693,45365686,45376798 Gene ID= ENSG00000204070.9 TPM= 3.62 Transcript Type= protein_coding chr20 45363200 45410610 45363200 45410610 + ENST00000419593.5@SYS1-DBNDD2 ENST00000419593.5 protein_coding 45363200,45363529,45365619,45408460,45408801,45409932 45363315,45363693,45365686,45408606,45408938,45410610 Gene ID= ENSG00000254806.5 TPM= 3.32 Transcript Type= nonsense_mediated_decay chr20 45406057 45410610 45406057 45410610 + ENST00000372723.7@DBNDD2 ENST00000372723.7 protein_coding 45406057,45408460,45408801,45409932 45406210,45408606,45408938,45410610 Gene ID= ENSG00000244274.7 TPM= 4.23 Transcript Type= protein_coding chr20 45406619 45410610 45406619 45410610 + ENST00000360981.8@DBNDD2 ENST00000360981.8 protein_coding 45406619,45408460,45408801,45409932 45406732,45408606,45408938,45410610 Gene ID= ENSG00000244274.7 TPM= 34.11 Transcript Type= protein_coding chr20 45406588 45410610 45406588 45410610 + ENST00000372717.5@DBNDD2 ENST00000372717.5 protein_coding 45406588,45408460,45408801,45409932 45406732,45408606,45409036,45410610 Gene ID= ENSG00000244274.7 TPM= 3.62 Transcript Type= protein_coding chr20 45416067 45426244 45416067 45426244 + ENST00000279036.11@PIGT ENST00000279036.11 protein_coding 45416067,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574 45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426244 Gene ID= ENSG00000124155.17 TPM= 272.19 Transcript Type= protein_coding chr20 45416107 45426244 45416107 45426244 + ENST00000543458.7@PIGT ENST00000543458.7 protein_coding 45416107,45416517,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574 45416343,45416654,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426244 Gene ID= ENSG00000124155.17 TPM= 14.11 Transcript Type= protein_coding chr20 45416137 45426241 45416137 45426241 + ENST00000372689.9@PIGT ENST00000372689.9 protein_coding 45416137,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45424216,45424496,45425574 45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45424381,45424579,45426241 Gene ID= ENSG00000124155.17 TPM= 3.85 Transcript Type= protein_coding chr20 45416084 45426202 45416084 45426202 + ENST00000279035.14@PIGT ENST00000279035.14 protein_coding 45416084,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574 45416343,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426202 Gene ID= ENSG00000124155.17 TPM= 2.72 Transcript Type= protein_coding chr20 45416141 45426240 45416141 45426240 + ENST00000640986.1@PIGT ENST00000640986.1 protein_coding 45416141,45416517,45418852,45419295,45419504,45420136,45420332,45420508,45421383,45424216,45424496,45425574 45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426240 Gene ID= ENSG00000124155.17 TPM= 2.34 Transcript Type= nonsense_mediated_decay chr20 45416123 45426196 45416123 45426196 + ENST00000638978.1@PIGT ENST00000638978.1 protein_coding 45416123,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574 45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421533,45424381,45424579,45426196 Gene ID= ENSG00000124155.17 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr20 45416141 45426196 45416141 45426196 + ENST00000640585.1@PIGT ENST00000640585.1 protein_coding 45416141,45416517,45418772,45419295,45419504,45420136,45420332,45420528,45421383,45424216,45424496,45425574 45416343,45416694,45418979,45419395,45419590,45420223,45420429,45420693,45421583,45424381,45424579,45426196 Gene ID= ENSG00000124155.17 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr20 45416123 45426206 45416123 45426206 + ENST00000640364.1@PIGT ENST00000640364.1 protein_coding 45416123,45416517,45418852,45419295,45419504,45420136,45420332,45420528,45424216,45424496,45425574 45416343,45416694,45418979,45419395,45419590,45420223,45420429,45421583,45424381,45424579,45426206 Gene ID= ENSG00000124155.17 TPM= 1.81 Transcript Type= retained_intron chr20 45791937 45811427 45791937 45811427 + ENST00000372622.7@DNTTIP1 ENST00000372622.7 protein_coding 45791937,45792677,45793921,45795345,45801074,45801402,45801999,45803333,45805146,45805306,45809114,45810885,45811057 45792109,45792747,45794017,45795443,45801142,45801458,45802057,45803378,45805204,45805366,45809185,45810940,45811427 Gene ID= ENSG00000101457.12 TPM= 38.94 Transcript Type= protein_coding chr20 45812576 45816957 45812576 45816957 + ENST00000356455.8@UBE2C ENST00000356455.8 protein_coding 45812576,45813437,45814384,45815541,45815854,45816709 45812796,45813464,45814470,45815745,45815913,45816957 Gene ID= ENSG00000175063.16 TPM= 1.81 Transcript Type= protein_coding chr20 45823214 45827341 45823214 45827341 - ENST00000372555.7@TNNC2 ENST00000372555.7 protein_coding 45827246,45824783,45824495,45824292,45823991,45823214 45827341,45824834,45824638,45824406,45824127,45823379 Gene ID= ENSG00000101470.9 TPM= 9.06 Transcript Type= protein_coding chr20 45833633 45843275 45833633 45843275 + transcript1706.chr20.nic@SNX21 transcript1706.chr20.nic protein_coding 45833633,45834201,45834959,45838268,45840448,45840639 45833940,45834468,45835116,45838360,45840458,45843275 Gene ID= ENSG00000124104.18 TPM= 10.41 Transcript Type= NA chr20 45833633 45843275 45833633 45843275 + transcript1720.chr20.nic@SNX21 transcript1720.chr20.nic protein_coding 45833633,45834201,45834959,45840639 45833940,45834468,45835109,45843275 Gene ID= ENSG00000124104.18 TPM= 37.58 Transcript Type= NA chr20 45833852 45841730 45833852 45841730 + ENST00000491381.5@SNX21 ENST00000491381.5 protein_coding 45833852,45834201,45834959,45840639 45833940,45834468,45835116,45841730 Gene ID= ENSG00000124104.18 TPM= 16.3 Transcript Type= protein_coding chr20 45841721 45857406 45841721 45857406 - ENST00000217455.8@ACOT8 ENST00000217455.8 protein_coding 45857188,45855159,45848450,45844263,45843527,45841721 45857406,45855292,45848675,45844420,45843721,45841956 Gene ID= ENSG00000101473.16 TPM= 56.14 Transcript Type= protein_coding chr20 45841726 45857389 45841726 45857389 - ENST00000461272.5@ACOT8 ENST00000461272.5 protein_coding 45857188,45855159,45848450,45844263,45843527,45841726 45857389,45855292,45848675,45844420,45843772,45841956 Gene ID= ENSG00000101473.16 TPM= 11.77 Transcript Type= nonsense_mediated_decay chr20 45841738 45857402 45841738 45857402 - ENST00000488679.5@ACOT8 ENST00000488679.5 protein_coding 45857188,45848450,45844263,45843527,45841738 45857402,45848675,45844420,45843721,45841956 Gene ID= ENSG00000101473.16 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr20 45857616 45879128 45857616 45879128 + transcript1734.chr20.nnic@ZSWIM3 transcript1734.chr20.nnic protein_coding 45857616,45872671,45876714 45857980,45872825,45879128 Gene ID= ENSG00000132801.6 TPM= 1.81 Transcript Type= NA chr20 45857617 45879122 45857617 45879122 + ENST00000255152.2@ZSWIM3 ENST00000255152.2 protein_coding 45857617,45876714 45857980,45879122 Gene ID= ENSG00000132801.6 TPM= 14.49 Transcript Type= protein_coding chr20 45881241 45885265 45881241 45885265 + ENST00000372520.1@ZSWIM1 ENST00000372520.1 protein_coding 45881241,45882533,45884985 45881261,45884398,45885265 Gene ID= ENSG00000168612.4 TPM= 2.72 Transcript Type= protein_coding chr20 45888634 45891287 45888634 45891287 - ENST00000372518.4@NEURL2 ENST00000372518.4 protein_coding 45890250,45888634 45891287,45888873 Gene ID= ENSG00000124257.6 TPM= 9.06 Transcript Type= protein_coding chr20 45890144 45898820 45890144 45898820 + ENST00000606788.5@CTSA ENST00000606788.5 protein_coding 45890144,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367 45891379,45891762,45892027,45892323,45892484,45892887,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820 Gene ID= ENSG00000064601.16 TPM= 12.33 Transcript Type= nonsense_mediated_decay chr20 45891341 45898820 45891341 45898820 + ENST00000191018.9@CTSA ENST00000191018.9 protein_coding 45891341,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367 45891425,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820 Gene ID= ENSG00000064601.16 TPM= 366.09 Transcript Type= protein_coding chr20 45891044 45898820 45891044 45898820 + ENST00000372484.7@CTSA ENST00000372484.7 protein_coding 45891044,45891569,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367 45891379,45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820 Gene ID= ENSG00000064601.16 TPM= 1140.34 Transcript Type= protein_coding chr20 45891322 45898820 45891322 45898820 + ENST00000354880.9@CTSA ENST00000354880.9 protein_coding 45891322,45891569,45891916,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367 45891379,45891762,45892027,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898820 Gene ID= ENSG00000064601.16 TPM= 19.42 Transcript Type= protein_coding chr20 45891376 45898786 45891376 45898786 + ENST00000372459.6@CTSA ENST00000372459.6 protein_coding 45891376,45891916,45892273,45892398,45892725,45893220,45893988,45894650,45894823,45894994,45896965,45897717,45898005,45898367 45891762,45892027,45892323,45892484,45892880,45893311,45894072,45894741,45894901,45895133,45897040,45897806,45898109,45898786 Gene ID= ENSG00000064601.16 TPM= 76.36 Transcript Type= protein_coding chr20 45898760 45912147 45898760 45912147 - ENST00000372431.7@PLTP ENST00000372431.7 protein_coding 45912079,45911353,45911152,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760 45912147,45911463,45911251,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063 Gene ID= ENSG00000100979.14 TPM= 686.48 Transcript Type= protein_coding chr20 45898760 45910937 45898760 45910937 - ENST00000372420.5@PLTP ENST00000372420.5 protein_coding 45910871,45909942,45909516,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898760 45910937,45910070,45909671,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063 Gene ID= ENSG00000100979.14 TPM= 12 Transcript Type= protein_coding chr20 45898806 45912155 45898806 45912155 - ENST00000420868.2@PLTP ENST00000420868.2 protein_coding 45912079,45911353,45911152,45907841,45907692,45906268,45904942,45904800,45902440,45902267,45899836,45899622,45899462,45898806 45912155,45911463,45911251,45907904,45907755,45906359,45905118,45904859,45902604,45902334,45899878,45899685,45899538,45899063 Gene ID= ENSG00000100979.14 TPM= 2.72 Transcript Type= protein_coding chr20 45934678 45948046 45934678 45948046 + transcript1805.chr20.nnic@PCIF1 transcript1805.chr20.nnic protein_coding 45934678,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944245,45944868,45945711,45946029,45946200,45947073,45947263,45947524 45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45944320,45945030,45945883,45946115,45946384,45947166,45947438,45948046 Gene ID= ENSG00000100982.11 TPM= 2.72 Transcript Type= NA chr20 45934678 45948046 45934678 45948046 + transcript1811.chr20.nnic@PCIF1 transcript1811.chr20.nnic protein_coding 45934678,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524 45934804,45937698,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948046 Gene ID= ENSG00000100982.11 TPM= 3.62 Transcript Type= NA chr20 45934678 45948046 45934678 45948046 + transcript1813.chr20.nic@PCIF1 transcript1813.chr20.nic protein_coding 45934678,45937418,45938981,45939215,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524 45934804,45937585,45939123,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948046 Gene ID= ENSG00000100982.11 TPM= 4.53 Transcript Type= NA chr20 45946660 45948046 45946660 45948046 + transcript1815.chr20.nnic@PCIF1 transcript1815.chr20.nnic protein_coding 45946660,45947073,45947263,45947524 45946732,45947166,45947438,45948046 Gene ID= ENSG00000100982.11 TPM= 9.96 Transcript Type= NA chr20 45934628 45948023 45934628 45948023 + ENST00000372409.7@PCIF1 ENST00000372409.7 protein_coding 45934628,45937418,45938981,45939215,45940475,45940809,45941053,45943097,45943340,45943666,45944868,45945711,45946029,45946200,45947073,45947263,45947524 45934804,45937585,45939123,45939339,45940612,45940939,45941207,45943244,45943423,45943765,45945030,45945883,45946115,45946384,45947166,45947438,45948023 Gene ID= ENSG00000100982.11 TPM= 86.03 Transcript Type= protein_coding chr20 45934733 45937972 45934733 45937972 + ENST00000616084.1@PCIF1 ENST00000616084.1 protein_coding 45934733,45937418 45934804,45937972 Gene ID= ENSG00000100982.11 TPM= 3.62 Transcript Type= processed_transcript chr20 45948654 45971865 45948654 45971865 - transcript1801.chr20.nic@ZNF335 transcript1801.chr20.nic protein_coding 45971210,45969451,45968285,45967734,45967494,45965628,45963738,45963473,45962070,45960864,45960616,45960449,45960208,45959201,45957835,45957586,45953689,45952598,45952147,45950453,45950219,45949966,45949800,45949485,45949333,45949170,45948654 45971865,45969691,45968362,45968027,45967634,45965774,45963990,45963650,45962182,45960882,45960732,45960525,45960368,45959433,45957928,45957680,45953948,45952709,45952521,45950595,45950373,45950069,45949877,45949568,45949398,45949251,45949080 Gene ID= ENSG00000198026.7 TPM= 11.77 Transcript Type= NA chr20 46008908 46016561 46008908 46016561 + ENST00000372330.3@MMP9 ENST00000372330.3 protein_coding 46008908,46009866,46010483,46010922,46011143,46011574,46012137,46012427,46013255,46013657,46014124,46014371,46016250 46009064,46010098,46010631,46011050,46011316,46011747,46012313,46012582,46013534,46013796,46014274,46014474,46016561 Gene ID= ENSG00000100985.7 TPM= 1.81 Transcript Type= protein_coding chr20 46021684 46023588 46021684 46023588 + transcript1819.chr20.nnic@SLC12A5 transcript1819.chr20.nnic protein_coding 46021684,46022890,46023369 46021886,46023071,46023588 Gene ID= ENSG00000124140.13 TPM= 1.81 Transcript Type= NA chr20 46021699 46023581 46021699 46023581 + ENST00000628272.1@SLC12A5 ENST00000628272.1 protein_coding 46021699,46023369 46021886,46023581 Gene ID= ENSG00000124140.13 TPM= 4.53 Transcript Type= protein_coding chr20 46060985 46089952 46060985 46089952 - ENST00000290231.10@NCOA5 ENST00000290231.10 protein_coding 46089817,46079387,46070210,46068502,46067055,46065029,46063360,46060985 46089952,46079453,46070536,46068638,46067181,46065228,46063680,46062889 Gene ID= ENSG00000124160.11 TPM= 21.28 Transcript Type= protein_coding chr20 46060973 46089946 46060973 46089946 - transcript1827.chr20.nic@NCOA5 transcript1827.chr20.nic protein_coding 46089817,46070210,46068502,46067055,46065029,46063360,46060973 46089946,46070536,46068638,46067181,46065228,46063680,46062889 Gene ID= ENSG00000124160.11 TPM= 5.89 Transcript Type= NA chr20 46118272 46129863 46118272 46129863 + ENST00000372285.7@CD40 ENST00000372285.7 protein_coding 46118272,46121820,46122233,46122610,46123126,46126640,46128138,46128330,46128882 46118394,46121898,46122358,46122756,46123219,46126701,46128224,46128358,46129863 Gene ID= ENSG00000101017.13 TPM= 11.77 Transcript Type= protein_coding chr20 46349730 46364468 46349730 46364468 - transcript1840.chr20.nnic@SLC35C2 transcript1840.chr20.nnic protein_coding 46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349730 46364468,46358763,46357773,46356637,46355874,46355241,46354965,46352185,46350890,46350524 Gene ID= ENSG00000080189.14 TPM= 5.73 Transcript Type= NA chr20 46349728 46364468 46349728 46364468 - transcript1845.chr20.nic@SLC35C2 transcript1845.chr20.nic protein_coding 46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349728 46364468,46358763,46357702,46356637,46355874,46355241,46354965,46352226,46350890,46350524 Gene ID= ENSG00000080189.14 TPM= 3.02 Transcript Type= NA chr20 46349731 46363973 46349731 46363973 - transcript1846.chr20.nnic@SLC35C2 transcript1846.chr20.nnic protein_coding 46363900,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349731 46363973,46358763,46357773,46356637,46355874,46355241,46354965,46352226,46350890,46350524 Gene ID= ENSG00000080189.14 TPM= 8.15 Transcript Type= NA chr20 46349731 46363985 46349731 46363985 - transcript1848.chr20.nnic@SLC35C2 transcript1848.chr20.nnic protein_coding 46363900,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349731 46363985,46358958,46357773,46356637,46355874,46355241,46354965,46352226,46350890,46350524 Gene ID= ENSG00000080189.14 TPM= 5.43 Transcript Type= NA chr20 46349730 46364468 46349730 46364468 - transcript1859.chr20.nic@SLC35C2 transcript1859.chr20.nic protein_coding 46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46349730 46364468,46358763,46357773,46356637,46355874,46355241,46354965,46352226,46350890 Gene ID= ENSG00000080189.14 TPM= 4.83 Transcript Type= NA chr20 46349528 46364395 46349528 46364395 - ENST00000372230.9@SLC35C2 ENST00000372230.9 protein_coding 46364371,46358387,46357623,46356574,46355802,46355073,46354882,46352051,46350761,46349528 46364395,46358763,46357773,46356637,46355874,46355241,46354965,46352226,46350890,46350524 Gene ID= ENSG00000080189.14 TPM= 79.69 Transcript Type= protein_coding chr20 46366045 46406640 46366045 46406640 - transcript1869.chr20.nic@ELMO2 transcript1869.chr20.nic protein_coding 46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366045 46406640,46398771,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560 Gene ID= ENSG00000062598.17 TPM= 13.28 Transcript Type= NA chr20 46366045 46406635 46366045 46406635 - transcript1874.chr20.nic@ELMO2 transcript1874.chr20.nic protein_coding 46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366045 46406635,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560 Gene ID= ENSG00000062598.17 TPM= 19.62 Transcript Type= NA chr20 46366049 46406617 46366049 46406617 - ENST00000290246.10@ELMO2 ENST00000290246.10 protein_coding 46406548,46398697,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366049 46406617,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560 Gene ID= ENSG00000062598.17 TPM= 50.41 Transcript Type= protein_coding chr20 46366050 46406559 46366050 46406559 - ENST00000372176.5@ELMO2 ENST00000372176.5 protein_coding 46406548,46398697,46394405,46393981,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366050 46406559,46398771,46394532,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560 Gene ID= ENSG00000062598.17 TPM= 3.32 Transcript Type= protein_coding chr20 46366055 46406632 46366055 46406632 - ENST00000396391.5@ELMO2 ENST00000396391.5 protein_coding 46406548,46394405,46394049,46393529,46393093,46389039,46387338,46386124,46383416,46380253,46375668,46375236,46374536,46374332,46373399,46371806,46371579,46371352,46370443,46368891,46366055 46406632,46394503,46394089,46393601,46393143,46389220,46387437,46386275,46383494,46380303,46375790,46375370,46374640,46374440,46373535,46371969,46371691,46371459,46370525,46368968,46367560 Gene ID= ENSG00000062598.17 TPM= 32.3 Transcript Type= protein_coding chr20 46499967 46513574 46499967 46513574 - transcript1882.chr20.nic@ZNF334 transcript1882.chr20.nic protein_coding 46513410,46512082,46506307,46504614,46504214,46499967 46513574,46512140,46506458,46504740,46504306,46503097 Gene ID= ENSG00000198185.11 TPM= 2.26 Transcript Type= NA chr20 46499652 46513582 46499652 46513582 - transcript1889.chr20.nic@ZNF334 transcript1889.chr20.nic protein_coding 46513497,46512082,46504614,46504214,46499652 46513582,46512140,46504740,46504306,46503097 Gene ID= ENSG00000198185.11 TPM= 2.26 Transcript Type= NA chr20 46684365 46689779 46684365 46689779 - ENST00000372114.3@TP53RK ENST00000372114.3 protein_coding 46689132,46684365 46689779,46687231 Gene ID= ENSG00000172315.5 TPM= 32.6 Transcript Type= protein_coding chr20 46709629 46736344 46709629 46736344 + transcript1894.chr20.nnic@SLC2A10 transcript1894.chr20.nnic protein_coding 46709629,46725041,46726815,46729353,46733756 46709740,46726324,46726986,46729488,46736344 Gene ID= ENSG00000197496.5 TPM= 4.98 Transcript Type= NA chr20 46709487 46736347 46709487 46736347 + ENST00000359271.3@SLC2A10 ENST00000359271.3 protein_coding 46709487,46725041,46726864,46729353,46733756 46709740,46726324,46726986,46729488,46736347 Gene ID= ENSG00000197496.5 TPM= 24.9 Transcript Type= protein_coding chr20 46894624 47188844 46894624 47188844 + ENST00000327619.9@EYA2 ENST00000327619.9 protein_coding 46894624,46990001,47001428,47004942,47016181,47072185,47074158,47089239,47097085,47143059,47169139,47172707,47179798,47180815,47183291,47188053 46894987,46990119,47001473,47005084,47016297,47072252,47074335,47089381,47097168,47143148,47169197,47172867,47179912,47180936,47183391,47188844 Gene ID= ENSG00000064655.18 TPM= 1.81 Transcript Type= protein_coding chr20 47209218 47356704 47209218 47356704 - transcript1900.chr20.nic@ZMYND8 transcript1900.chr20.nic protein_coding 47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238758,47236326,47229726,47227203,47224317,47221314,47220258,47212642,47209218 47356704,47347926,47310204,47298872,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47212725,47210897 Gene ID= ENSG00000101040.19 TPM= 5.5 Transcript Type= NA chr20 47209214 47356889 47209214 47356889 - ENST00000446994.6@ZMYND8 ENST00000446994.6 protein_coding 47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238758,47236326,47229726,47227203,47224317,47221314,47220258,47212642,47209214 47356889,47347926,47310204,47298947,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47212725,47210897 Gene ID= ENSG00000101040.19 TPM= 6.4 Transcript Type= protein_coding chr20 47209218 47356728 47209218 47356728 - transcript1903.chr20.nic@ZMYND8 transcript1903.chr20.nic protein_coding 47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238896,47236326,47229726,47227203,47224317,47221314,47220258,47212642,47209218 47356728,47347926,47310204,47298872,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47212725,47210897 Gene ID= ENSG00000101040.19 TPM= 6.7 Transcript Type= NA chr20 47209214 47356728 47209214 47356728 - transcript1906.chr20.nic@ZMYND8 transcript1906.chr20.nic protein_coding 47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238758,47236326,47229726,47227203,47224317,47221314,47220258,47209214 47356728,47347926,47310204,47298947,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47210897 Gene ID= ENSG00000101040.19 TPM= 12.83 Transcript Type= NA chr20 47209218 47319103 47209218 47319103 - transcript1910.chr20.nic@ZMYND8 transcript1910.chr20.nic protein_coding 47318951,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238896,47236326,47229726,47227203,47224317,47221314,47220258,47212642,47209218 47319103,47310204,47298872,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47212725,47210897 Gene ID= ENSG00000101040.19 TPM= 5.8 Transcript Type= NA chr20 47209218 47319103 47209218 47319103 - transcript1912.chr20.nic@ZMYND8 transcript1912.chr20.nic protein_coding 47318951,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238896,47236326,47229726,47227203,47224317,47221314,47220258,47212642,47209218 47319103,47310204,47298947,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47212725,47210897 Gene ID= ENSG00000101040.19 TPM= 6.7 Transcript Type= NA chr20 47210441 47356699 47210441 47356699 - ENST00000352431.6@ZMYND8 ENST00000352431.6 protein_coding 47356657,47347856,47310056,47298729,47294666,47291796,47290187,47287229,47283571,47282102,47276314,47262288,47249287,47246008,47238896,47236326,47229726,47227203,47224317,47221314,47220258,47210441 47356699,47347926,47310204,47298947,47294779,47291888,47290274,47287284,47283648,47282217,47276795,47262428,47249439,47246517,47239138,47236516,47229806,47227281,47224556,47221474,47220324,47210897 Gene ID= ENSG00000101040.19 TPM= 5.89 Transcript Type= protein_coding chr20 47352561 47354633 47352561 47354633 + ENST00000413818.2@AL031666.1 ENST00000413818.2 antisense_RNA 47352561,47353005 47352740,47354633 Gene ID= ENSG00000231119.2 TPM= 1.81 Transcript Type= antisense_RNA chr20 47657407 47785507 47657407 47785507 - transcript1919.chr20.nic@SULF2 transcript1919.chr20.nic protein_coding 47785343,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657407 47785507,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392 Gene ID= ENSG00000196562.14 TPM= 33.51 Transcript Type= NA chr20 47656912 47786586 47656912 47786586 - ENST00000359930.8@SULF2 ENST00000359930.8 protein_coding 47785835,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47656912 47786586,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392 Gene ID= ENSG00000196562.14 TPM= 8.15 Transcript Type= protein_coding chr20 47657406 47786616 47657406 47786616 - ENST00000484875.5@SULF2 ENST00000484875.5 protein_coding 47786048,47757189,47736703,47702519,47690126,47684431,47682994,47678676,47677078,47676494,47672198,47666260,47665857,47665199,47664130,47663453,47663070,47661773,47659697,47659399,47657406 47786616,47757463,47736942,47702670,47690295,47684581,47683169,47678804,47677134,47676623,47672393,47666488,47665953,47665293,47664189,47663622,47663212,47661896,47659730,47659452,47658392 Gene ID= ENSG00000196562.14 TPM= 4.53 Transcript Type= protein_coding chr20 48025219 48060286 48025219 48060286 + transcript1924.chr20.nnic@NA transcript1924.chr20.nnic NA 48025219,48041679,48052077,48054484,48057435 48025265,48041786,48052253,48054625,48060286 Gene ID= novel_gene_chr20_1925 TPM= 1.81 Transcript Type= NA chr20 48624252 48682767 48624252 48682767 - transcript1933.chr20.nnic@PREX1 transcript1933.chr20.nnic protein_coding 48682510,48681235,48679651,48679360,48676193,48666283,48659919,48658136,48657040,48655290,48653361,48652586,48651396,48650894,48649996,48649300,48645851,48644409,48642407,48642168,48639766,48637711,48636463,48634676,48632496,48632277,48630728,48629449,48627861,48627548,48624252 48682767,48681335,48679754,48679409,48676268,48666355,48660061,48658228,48657188,48655375,48653497,48652706,48651583,48651055,48650206,48649576,48646057,48644497,48642489,48642258,48639894,48637752,48636683,48634775,48632639,48632391,48630794,48629621,48627963,48627615,48625927 Gene ID= ENSG00000124126.13 TPM= 4.98 Transcript Type= NA chr20 48692324 48827999 48692324 48827999 - transcript1935.chr20.nic@PREX1 transcript1935.chr20.nic protein_coding 48827642,48747809,48745025,48734546,48726290,48708260,48700753,48692324 48827999,48747880,48745147,48734650,48726391,48708421,48700886,48692790 Gene ID= ENSG00000124126.13 TPM= 1.81 Transcript Type= NA chr20 48624252 48827883 48624252 48827883 - ENST00000371941.3@PREX1 ENST00000371941.3 protein_coding 48827642,48747809,48745025,48734546,48726290,48708260,48700753,48692672,48690947,48688657,48681235,48679651,48679360,48676193,48666283,48659919,48658136,48657040,48655290,48653361,48652586,48651396,48650894,48649996,48649300,48645851,48644409,48642407,48642168,48639766,48637711,48636463,48634676,48632496,48632277,48630728,48629449,48627861,48627548,48624252 48827883,48747880,48745147,48734650,48726391,48708421,48700886,48692790,48691096,48688804,48681335,48679754,48679409,48676268,48666355,48660061,48658228,48657188,48655375,48653497,48652706,48651583,48651055,48650206,48649576,48646057,48644497,48642489,48642258,48639894,48637752,48636683,48634775,48632639,48632391,48630794,48629621,48627963,48627615,48625927 Gene ID= ENSG00000124126.13 TPM= 24 Transcript Type= protein_coding chr20 49046284 49096586 49046284 49096586 + transcript1941.chr20.nnic@CSE1L transcript1941.chr20.nnic protein_coding 49046284,49058453,49063202,49066192,49066365,49067190,49068715,49070205,49072286,49072568,49074785,49075318,49076980,49078561,49084026,49085283,49088009,49089247,49089538,49090742,49090937,49092046,49094140,49094732,49096176,49096349 49046423,49058548,49063344,49066293,49066510,49067280,49068822,49070297,49072453,49072697,49074850,49075520,49077064,49078622,49084162,49085386,49088106,49089397,49089746,49090839,49091022,49092127,49094286,49094963,49096200,49096586 Gene ID= ENSG00000124207.16 TPM= 1.81 Transcript Type= NA chr20 49046312 49096952 49046312 49096952 + ENST00000262982.2@CSE1L ENST00000262982.2 protein_coding 49046312,49058453,49063202,49066192,49066365,49067190,49068715,49070205,49072286,49072568,49074785,49075318,49076980,49078561,49084026,49085283,49088009,49089247,49089538,49090742,49090937,49092046,49094140,49094732,49096349 49046423,49058548,49063344,49066293,49066510,49067280,49068822,49070297,49072453,49072697,49074850,49075520,49077064,49078622,49084162,49085386,49088106,49089397,49089746,49090839,49091022,49092127,49094286,49094963,49096952 Gene ID= ENSG00000124207.16 TPM= 65.2 Transcript Type= protein_coding chr20 49113341 49188367 49113341 49188367 - ENST00000371828.7@STAU1 ENST00000371828.7 protein_coding 49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113341 49188367,49174269,49154071,49151747,49135931,49124605,49123235,49120128,49118408,49118096,49117248,49115867,49114893 Gene ID= ENSG00000124214.19 TPM= 66.92 Transcript Type= protein_coding chr20 49113339 49188367 49113339 49188367 - ENST00000371856.6@STAU1 ENST00000371856.6 protein_coding 49188116,49174195,49165997,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113339 49188367,49174269,49166285,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893 Gene ID= ENSG00000124214.19 TPM= 15.23 Transcript Type= protein_coding chr20 49113523 49188367 49113523 49188367 - ENST00000360426.8@STAU1 ENST00000360426.8 protein_coding 49188116,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523 49188367,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893 Gene ID= ENSG00000124214.19 TPM= 54.49 Transcript Type= protein_coding chr20 49113523 49188367 49113523 49188367 - ENST00000340954.11@STAU1 ENST00000340954.11 protein_coding 49188116,49179122,49174195,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523 49188367,49179244,49174269,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893 Gene ID= ENSG00000124214.19 TPM= 9.21 Transcript Type= protein_coding chr20 49113523 49188367 49113523 49188367 - ENST00000347458.9@STAU1 ENST00000347458.9 protein_coding 49188116,49153933,49151582,49135833,49124375,49123092,49119982,49118333,49117777,49117126,49115782,49113523 49188367,49154071,49151747,49135931,49124587,49123235,49120128,49118408,49118096,49117248,49115867,49114893 Gene ID= ENSG00000124214.19 TPM= 9.21 Transcript Type= protein_coding chr20 49219416 49244075 49219416 49244075 + transcript1963.chr20.nic@DDX27 transcript1963.chr20.nic protein_coding 49219416,49221452,49222957,49223268,49224945,49225113,49226430,49228715,49230199,49231023,49233306,49233568,49234935,49236150,49236333,49238949,49239236,49241893,49242083,49242594,49243629,49243816 49219541,49221598,49223016,49223433,49224991,49225199,49226535,49228888,49230349,49231115,49233405,49233709,49235088,49236231,49236510,49239055,49239338,49241987,49242206,49242681,49243703,49244075 Gene ID= ENSG00000124228.14 TPM= 5.43 Transcript Type= NA chr20 49245906 49270764 49245906 49270764 - transcript1971.chr20.nic@ZNFX1 transcript1971.chr20.nic protein_coding 49269942,49266135,49264716,49263334,49260463,49257417,49255808,49254495,49253666,49252720,49251527,49245906 49270764,49266266,49264864,49263483,49260577,49257664,49255947,49254649,49253811,49252830,49251622,49249711 Gene ID= ENSG00000124201.14 TPM= 12.68 Transcript Type= NA chr20 49278178 49289260 49278178 49289260 + ENST00000371743.7@ZFAS1 ENST00000371743.7 antisense_RNA 49278178,49279104,49280485,49280903,49289045 49278716,49279208,49280570,49280964,49289260 Gene ID= ENSG00000177410.12 TPM= 19.47 Transcript Type= antisense_RNA chr20 49278178 49289260 49278178 49289260 + ENST00000441722.5@ZFAS1 ENST00000441722.5 antisense_RNA 49278178,49279104,49280485,49289045 49278716,49279208,49280570,49289260 Gene ID= ENSG00000177410.12 TPM= 10.87 Transcript Type= antisense_RNA chr20 49278178 49289260 49278178 49289260 + ENST00000417721.5@ZFAS1 ENST00000417721.5 antisense_RNA 49278178,49279104,49289045 49278716,49279208,49289260 Gene ID= ENSG00000177410.12 TPM= 1.81 Transcript Type= antisense_RNA chr20 49278271 49289260 49278271 49289260 + ENST00000458653.5@ZFAS1 ENST00000458653.5 antisense_RNA 49278271,49279104,49280485,49280903,49289045 49278397,49279208,49280570,49280964,49289260 Gene ID= ENSG00000177410.12 TPM= 1.36 Transcript Type= antisense_RNA chr20 49509904 49568185 49509904 49568185 - transcript1978.chr20.nic@PTGIS transcript1978.chr20.nic protein_coding 49568043,49550066,49547841,49544305,49539570,49524058,49514227,49513080,49509904 49568185,49550189,49548019,49544448,49539721,49524239,49514395,49513261,49511179 Gene ID= ENSG00000124212.5 TPM= 1.81 Transcript Type= NA chr20 49503874 49568146 49503874 49568146 - ENST00000244043.4@PTGIS ENST00000244043.4 protein_coding 49568043,49550066,49547841,49544305,49539570,49524058,49514227,49513080,49511028,49503874 49568146,49550189,49548019,49544448,49539721,49524239,49514395,49513261,49511179,49508064 Gene ID= ENSG00000124212.5 TPM= 6.34 Transcript Type= protein_coding chr20 49632946 49713868 49632946 49713868 - transcript1980.chr20.nnic@B4GALT5 transcript1980.chr20.nnic protein_coding 49713576,49656568,49647761,49646965,49643526,49642468,49640478,49639678,49637341,49632946 49713868,49656702,49647892,49647078,49643650,49642584,49640665,49639800,49637442,49636459 Gene ID= ENSG00000158470.5 TPM= 2.72 Transcript Type= NA chr20 49632945 49713878 49632945 49713878 - ENST00000371711.4@B4GALT5 ENST00000371711.4 protein_coding 49713576,49656568,49646965,49643526,49642468,49640478,49639678,49637341,49632945 49713878,49656702,49647078,49643650,49642584,49640665,49639800,49637442,49636459 Gene ID= ENSG00000158470.5 TPM= 77.88 Transcript Type= protein_coding chr20 49769308 49775375 49769308 49775375 . transcript1985.chr20.nnic@NA transcript1985.chr20.nnic NA 49769308,49771011,49774351,49775228 49769400,49771080,49774448,49775375 Gene ID= novel_gene_chr20_1986 TPM= 6.34 Transcript Type= NA chr20 49769308 49775454 49769308 49775454 - transcript1988.chr20.nnic@NA transcript1988.chr20.nnic NA 49775228,49771011,49769308 49775454,49771080,49769400 Gene ID= novel_gene_chr20_1989 TPM= 5.43 Transcript Type= NA chr20 49903391 49915508 49903391 49915508 - ENST00000289431.9@SPATA2 ENST00000289431.9 protein_coding 49915380,49908155,49903391 49915508,49908592,49906845 Gene ID= ENSG00000158480.10 TPM= 31.69 Transcript Type= protein_coding chr20 49936348 49953892 49936348 49953892 + ENST00000244061.5@RNF114 ENST00000244061.5 protein_coding 49936348,49941561,49945382,49946136,49949248,49952076 49936552,49941711,49945488,49946250,49949355,49953892 Gene ID= ENSG00000124226.10 TPM= 126.17 Transcript Type= protein_coding chr20 49936377 49953878 49936377 49953878 + ENST00000622999.3@RNF114 ENST00000622999.3 protein_coding 49936377,49941583,49945382,49946136,49949248,49952076 49936552,49941711,49945488,49946250,49949355,49953878 Gene ID= ENSG00000124226.10 TPM= 2.11 Transcript Type= nonsense_mediated_decay chr20 49982999 49988886 49982999 49988886 + ENST00000244050.2@SNAI1 ENST00000244050.2 protein_coding 49982999,49983824,49987872 49983141,49984351,49988886 Gene ID= ENSG00000124216.3 TPM= 2.72 Transcript Type= protein_coding chr20 50081124 50115954 50081124 50115954 - ENST00000340309.7@UBE2V1 ENST00000340309.7 protein_coding 50115485,50096672,50084129,50081124 50115954,50096820,50084254,50082914 Gene ID= ENSG00000244687.11 TPM= 5.28 Transcript Type= protein_coding chr20 50081124 50113172 50081124 50113172 - ENST00000396059.7@UBE2V1 ENST00000396059.7 protein_coding 50113107,50084129,50081124 50113172,50084254,50082914 Gene ID= ENSG00000244687.11 TPM= 15.85 Transcript Type= processed_transcript chr20 50081124 50113173 50081124 50113173 - ENST00000371674.7@UBE2V1 ENST00000371674.7 protein_coding 50113107,50096672,50084129,50081124 50113173,50096820,50084254,50082914 Gene ID= ENSG00000244687.11 TPM= 132.06 Transcript Type= protein_coding chr20 50127366 50153740 50127366 50153740 - transcript2015.chr20.nic@TMEM189 transcript2015.chr20.nic protein_coding 50153517,50143502,50130856,50129546,50127366 50153740,50143621,50130947,50129690,50128187 Gene ID= ENSG00000240849.10 TPM= 1.81 Transcript Type= NA chr20 50172590 50176671 50172590 50176671 + ENST00000411453.2@LINC01273 ENST00000411453.2 lincRNA 50172590,50172923,50176281 50172788,50173017,50176671 Gene ID= ENSG00000231742.5 TPM= 2.72 Transcript Type= lincRNA chr20 50258371 50267103 50258371 50267103 . transcript2026.chr20.nnic@NA transcript2026.chr20.nnic NA 50258371,50264202,50265789 50258466,50264323,50267103 Gene ID= novel_gene_chr20_2027 TPM= 2.72 Transcript Type= NA chr20 50267486 50279795 50267486 50279795 + ENST00000425497.5@SMIM25 ENST00000425497.5 lincRNA 50267486,50275646,50277491,50278177 50267663,50275735,50277613,50279795 Gene ID= ENSG00000224397.5 TPM= 8.15 Transcript Type= lincRNA chr20 50292720 50314922 50292720 50314922 + ENST00000371639.7@LINC01270 ENST00000371639.7 lincRNA 50292720,50298156,50311805,50312352,50313300 50292830,50298413,50312014,50312430,50314922 Gene ID= ENSG00000203999.8 TPM= 1.81 Transcript Type= lincRNA chr20 50510354 50585241 50510354 50585241 + ENST00000371621.4@PTPN1 ENST00000371621.4 protein_coding 50510354,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265,50582692 50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50581460,50585241 Gene ID= ENSG00000196396.9 TPM= 10.11 Transcript Type= protein_coding chr20 50510356 50584547 50510356 50584547 + transcript2039.chr20.nic@PTPN1 transcript2039.chr20.nic protein_coding 50510356,50561363,50564969,50568380,50574517,50578420,50579168,50579703,50581265 50510590,50561453,50565069,50568478,50574654,50578629,50579329,50579926,50584547 Gene ID= ENSG00000196396.9 TPM= 3.32 Transcript Type= NA chr20 50510321 50584760 50510321 50584760 + ENST00000541713.5@PTPN1 ENST00000541713.5 protein_coding 50510321,50564969,50568380,50574517,50578420,50579168,50579703,50581265,50582692 50510590,50565069,50568478,50574654,50578629,50579329,50579926,50581460,50584760 Gene ID= ENSG00000196396.9 TPM= 2.87 Transcript Type= protein_coding chr20 50586109 50691526 50586109 50691526 - transcript2047.chr20.nnic@RIPOR3 transcript2047.chr20.nnic protein_coding 50691126,50630738,50619986,50616002,50611181,50610853,50609573,50609293,50608912,50608613,50608389,50604645,50602072,50597580,50596140,50595369,50594553,50593035,50592344,50589686,50587802,50586109 50691526,50630856,50620117,50616080,50611204,50610906,50609722,50609356,50608955,50608738,50608534,50604774,50602644,50597710,50596263,50595504,50594714,50593196,50592546,50589769,50587892,50587332 Gene ID= ENSG00000042062.11 TPM= 3.92 Transcript Type= NA chr20 50586109 50691678 50586109 50691678 - transcript2054.chr20.nnic@RIPOR3 transcript2054.chr20.nnic protein_coding 50691126,50630738,50619986,50616002,50611181,50610853,50609573,50609293,50608912,50608613,50608389,50604645,50602072,50597580,50596140,50595369,50594553,50593035,50592344,50589686,50587802,50586109 50691678,50630856,50620132,50616080,50611204,50610906,50609722,50609356,50608955,50608738,50608534,50604774,50602644,50597710,50596263,50595504,50595101,50593196,50592546,50589769,50587892,50587332 Gene ID= ENSG00000042062.11 TPM= 8.15 Transcript Type= NA chr20 50586109 50691640 50586109 50691640 - transcript2057.chr20.nnic@RIPOR3 transcript2057.chr20.nnic protein_coding 50691126,50630738,50619986,50616002,50611181,50610853,50609573,50609293,50608613,50608389,50604645,50602072,50597580,50596140,50595369,50594553,50593035,50592344,50589686,50587802,50586109 50691640,50630856,50620132,50616080,50611204,50610906,50609722,50609356,50608738,50608534,50604774,50602644,50597710,50596263,50595504,50594714,50593196,50592546,50589769,50587892,50587332 Gene ID= ENSG00000042062.11 TPM= 3.02 Transcript Type= NA chr20 50586109 50601871 50586109 50601871 - transcript2064.chr20.nnic@RIPOR3 transcript2064.chr20.nnic protein_coding 50600179,50597580,50596140,50595369,50594553,50593035,50592344,50589686,50587802,50586109 50601871,50599173,50596263,50595504,50594714,50593196,50592546,50589769,50587892,50587332 Gene ID= ENSG00000042062.11 TPM= 2.72 Transcript Type= NA chr20 50586108 50691528 50586108 50691528 - ENST00000327979.6@RIPOR3 ENST00000327979.6 protein_coding 50691126,50630738,50619986,50616002,50611181,50610853,50609573,50609293,50608912,50608613,50608389,50604645,50602072,50597580,50596140,50595369,50594553,50593035,50592344,50589686,50587802,50586108 50691528,50630856,50620132,50616080,50611204,50610906,50609722,50609356,50608955,50608738,50608534,50604774,50602644,50597710,50596263,50595504,50594714,50593196,50592546,50589769,50587892,50587332 Gene ID= ENSG00000042062.11 TPM= 14.79 Transcript Type= protein_coding chr20 50889048 50931240 50889048 50931240 - ENST00000396029.7@ADNP ENST00000396029.7 protein_coding 50930826,50928651,50903889,50902017,50889048 50931240,50928825,50904001,50902109,50894512 Gene ID= ENSG00000101126.15 TPM= 6.34 Transcript Type= protein_coding chr20 50890303 50930990 50890303 50930990 - ENST00000396032.7@ADNP ENST00000396032.7 protein_coding 50930826,50903889,50902017,50890303 50930990,50904001,50902109,50894512 Gene ID= ENSG00000101126.15 TPM= 3.62 Transcript Type= protein_coding chr20 50934673 50958550 50934673 50958550 - transcript2074.chr20.nnic@DPM1 transcript2074.chr20.nnic protein_coding 50958363,50955186,50948629,50945847,50945737,50942031,50936148,50934673 50958550,50955285,50948662,50945923,50945762,50942126,50936262,50935236 Gene ID= ENSG00000000419.12 TPM= 3.62 Transcript Type= NA chr20 50934867 50958550 50934867 50958550 - ENST00000371588.9@DPM1 ENST00000371588.9 protein_coding 50958363,50955186,50948629,50945847,50945737,50942031,50940865,50936148,50934867 50958550,50955285,50948662,50945923,50945762,50942126,50940933,50936262,50935236 Gene ID= ENSG00000000419.12 TPM= 31.99 Transcript Type= protein_coding chr20 50934867 50958555 50934867 50958555 - ENST00000371582.8@DPM1 ENST00000371582.8 protein_coding 50958363,50955186,50948629,50945847,50945737,50942031,50941129,50940865,50936148,50934867 50958555,50955285,50948662,50945923,50945762,50942126,50941209,50940933,50936262,50935236 Gene ID= ENSG00000000419.12 TPM= 2.11 Transcript Type= protein_coding chr20 50934867 50958550 50934867 50958550 - ENST00000466152.5@DPM1 ENST00000466152.5 protein_coding 50958363,50955186,50948629,50945847,50945737,50942031,50940865,50936148,50934867 50958550,50955285,50948662,50945923,50945762,50942126,50940955,50936262,50935236 Gene ID= ENSG00000000419.12 TPM= 1.2 Transcript Type= processed_transcript chr20 51596514 51768634 51596514 51768634 - ENST00000338821.5@ATP9A ENST00000338821.5 protein_coding 51768302,51729834,51725819,51712966,51697424,51696093,51694008,51690739,51689064,51676132,51674153,51671115,51669997,51656938,51639343,51628980,51627600,51625192,51622074,51618954,51618662,51617490,51613677,51610101,51608518,51607527,51604817,51596514 51768634,51729978,51725932,51713074,51697482,51696144,51694102,51690819,51689139,51676208,51674313,51671257,51670109,51657150,51639504,51629072,51627683,51625362,51622172,51619043,51618806,51617554,51613832,51610165,51608626,51607584,51605020,51601347 Gene ID= ENSG00000054793.13 TPM= 4.53 Transcript Type= protein_coding chr20 52084011 52191697 52084011 52191697 - ENST00000361387.6@ZFP64 ENST00000361387.6 protein_coding 52191591,52186832,52165864,52164695,52160123,52098438,52097373,52088392,52084011 52191697,52187071,52166025,52164757,52160374,52098587,52097435,52088643,52085266 Gene ID= ENSG00000020256.19 TPM= 3.62 Transcript Type= protein_coding chr20 52151278 52191760 52151278 52191760 - ENST00000346617.8@ZFP64 ENST00000346617.8 protein_coding 52191591,52186832,52164695,52160123,52151278 52191760,52187071,52164757,52160374,52153428 Gene ID= ENSG00000020256.19 TPM= 1.81 Transcript Type= protein_coding chr20 52151278 52191768 52151278 52191768 - ENST00000371515.8@ZFP64 ENST00000371515.8 protein_coding 52191591,52186832,52165864,52164695,52160123,52151278 52191768,52187065,52166025,52164757,52160374,52153428 Gene ID= ENSG00000020256.19 TPM= 3.62 Transcript Type= protein_coding chr20 54207847 54219953 54207847 54219953 + ENST00000371419.6@PFDN4 ENST00000371419.6 protein_coding 54207847,54214351,54215300,54219019 54208124,54214458,54215440,54219953 Gene ID= ENSG00000101132.9 TPM= 24.45 Transcript Type= protein_coding chr20 54208331 54219412 54208331 54219412 + transcript2088.chr20.nic@PFDN4 transcript2088.chr20.nic protein_coding 54208331,54214351,54215300,54219019 54208558,54214458,54215440,54219412 Gene ID= ENSG00000101132.9 TPM= 2.72 Transcript Type= NA chr20 54475597 54651171 54475597 54651171 + ENST00000262593.9@DOK5 ENST00000262593.9 protein_coding 54475597,54554933,54588483,54588687,54591616,54610388,54643458,54650415 54476012,54555040,54588597,54588806,54591805,54610523,54643578,54651171 Gene ID= ENSG00000101134.11 TPM= 1.81 Transcript Type= protein_coding chr20 55996564 56004977 55996564 56004977 - transcript2094.chr20.nnic@CBLN4 transcript2094.chr20.nnic protein_coding 56003881,56000731,55998619,55996564 56004977,56000847,55998754,55998018 Gene ID= ENSG00000054803.3 TPM= 1.81 Transcript Type= NA chr20 55997440 56005472 55997440 56005472 - ENST00000064571.2@CBLN4 ENST00000064571.2 protein_coding 56003881,56000731,55997440 56005472,56000847,55998754 Gene ID= ENSG00000054803.3 TPM= 29.88 Transcript Type= protein_coding chr20 56358915 56368663 56358915 56368663 + ENST00000371384.3@FAM210B ENST00000371384.3 protein_coding 56358915,56365087,56366071 56359191,56365262,56368663 Gene ID= ENSG00000124098.9 TPM= 228.2 Transcript Type= protein_coding chr20 56392379 56404259 56392379 56404259 + transcript2115.chr20.nic@CSTF1 transcript2115.chr20.nic protein_coding 56392379,56395521,56397207,56397644,56398967,56403468 56392538,56395721,56397484,56397841,56399357,56404259 Gene ID= ENSG00000101138.11 TPM= 4.53 Transcript Type= NA chr20 56392394 56406369 56392394 56406369 + ENST00000217109.8@CSTF1 ENST00000217109.8 protein_coding 56392394,56395521,56397207,56397644,56398967,56403468 56392713,56395721,56397484,56397841,56399357,56406369 Gene ID= ENSG00000101138.11 TPM= 29.88 Transcript Type= protein_coding chr20 56392638 56404472 56392638 56404472 + transcript2117.chr20.nic@CSTF1 transcript2117.chr20.nic protein_coding 56392638,56395521,56397207,56397644,56398967,56403468 56392815,56395721,56397484,56397841,56399357,56404472 Gene ID= ENSG00000101138.11 TPM= 6.34 Transcript Type= NA chr20 56468585 56518886 56468585 56518886 + ENST00000023939.8@RTFDC1 ENST00000023939.8 protein_coding 56468585,56472326,56473301,56474678,56476985,56484111,56513315,56516935,56517106,56518087 56468766,56472415,56473395,56474771,56477124,56484189,56513428,56516989,56517201,56518886 Gene ID= ENSG00000022277.12 TPM= 3.32 Transcript Type= protein_coding chr20 56468591 56519449 56468591 56519449 + ENST00000357348.9@RTFDC1 ENST00000357348.9 protein_coding 56468591,56473301,56474678,56476985,56484111,56513315,56516935,56517106,56518087 56468766,56473395,56474771,56477124,56484189,56513428,56516989,56517201,56519449 Gene ID= ENSG00000022277.12 TPM= 213.41 Transcript Type= protein_coding chr20 56468614 56518887 56468614 56518887 + ENST00000395881.7@RTFDC1 ENST00000395881.7 protein_coding 56468614,56473301,56474678,56476985,56484111,56513315,56517106,56518087 56468766,56473395,56474771,56477124,56484189,56513428,56517201,56518887 Gene ID= ENSG00000022277.12 TPM= 5.13 Transcript Type= protein_coding chr20 57351010 57379211 57351010 57379211 + ENST00000395841.6@RAE1 ENST00000395841.6 protein_coding 57351010,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57378013 57351422,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57379211 Gene ID= ENSG00000101146.12 TPM= 59.31 Transcript Type= protein_coding chr20 57351223 57379211 57351223 57379211 + ENST00000371242.6@RAE1 ENST00000371242.6 protein_coding 57351223,57354032,57354712,57356446,57365356,57366807,57367008,57368705,57373475,57373663,57374607,57378013 57351358,57354128,57354816,57356538,57365442,57366893,57367079,57368812,57373581,57373738,57374801,57379211 Gene ID= ENSG00000101146.12 TPM= 1.36 Transcript Type= protein_coding chr20 57391401 57409328 57391401 57409328 + transcript2134.chr20.nnic@RBM38 transcript2134.chr20.nnic protein_coding 57391401,57392654,57393279,57407543 57391795,57392777,57393333,57409328 Gene ID= ENSG00000132819.16 TPM= 9.96 Transcript Type= NA chr20 57391407 57409333 57391407 57409333 + ENST00000356208.9@RBM38 ENST00000356208.9 protein_coding 57391407,57392654,57393279,57407543 57391818,57392777,57393333,57409333 Gene ID= ENSG00000132819.16 TPM= 39.84 Transcript Type= protein_coding chr20 58228937 58237223 58228937 58237223 - transcript2141.chr20.nnic@PPP4R1L transcript2141.chr20.nnic transcribed_unprocessed_pseudogene 58237076,58236154,58235240,58232688,58228937 58237223,58236274,58235374,58232922,58231927 Gene ID= ENSG00000124224.16 TPM= 3.62 Transcript Type= NA chr20 58389122 58451101 58389122 58451101 + ENST00000475243.5@VAPB ENST00000475243.5 protein_coding 58389122,58418211,58434602,58438945,58440907,58444077 58389517,58418363,58434705,58439025,58441083,58451101 Gene ID= ENSG00000124164.15 TPM= 79.69 Transcript Type= protein_coding chr20 58389217 58445554 58389217 58445554 + transcript2149.chr20.nic@VAPB transcript2149.chr20.nic protein_coding 58389217,58418211,58438945,58440907,58444077 58389517,58418363,58439025,58441083,58445554 Gene ID= ENSG00000124164.15 TPM= 3.62 Transcript Type= NA chr20 58651283 58679526 58651283 58679526 + ENST00000371141.8@STX16 ENST00000371141.8 protein_coding 58651283,58659623,58667490,58667987,58669291,58670512,58671154,58673631,58676187 58652138,58659634,58667597,58668127,58669453,58670603,58671297,58673711,58679526 Gene ID= ENSG00000124222.22 TPM= 4.07 Transcript Type= protein_coding chr20 58651272 58679526 58651272 58679526 + ENST00000355957.9@STX16 ENST00000355957.9 protein_coding 58651272,58659623,58667490,58667987,58669291,58670512,58671154,58673631,58676187 58652087,58659634,58667597,58668127,58669453,58670603,58671297,58673711,58679526 Gene ID= ENSG00000124222.22 TPM= 6.79 Transcript Type= protein_coding chr20 58692613 58715844 58692613 58715844 + ENST00000356091.10@NPEPL1 ENST00000356091.10 protein_coding 58692613,58693737,58694422,58698684,58699197,58701016,58707123,58712479,58713420,58713917,58714560,58715168 58693050,58693922,58694592,58698773,58699278,58701158,58707200,58712579,58713543,58714093,58714670,58715844 Gene ID= ENSG00000215440.11 TPM= 110.48 Transcript Type= protein_coding chr20 58889100 58911192 58889100 58911192 + ENST00000477931.5@GNAS ENST00000477931.5 protein_coding 58889100,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683 58889353,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192 Gene ID= ENSG00000087460.24 TPM= 109.76 Transcript Type= processed_transcript chr20 58839718 58911192 58839718 58911192 + ENST00000313949.11@GNAS ENST00000313949.11 protein_coding 58839718,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683 58840886,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192 Gene ID= ENSG00000087460.24 TPM= 7.85 Transcript Type= protein_coding chr20 58889171 58911179 58889171 58911179 + ENST00000480975.5@GNAS ENST00000480975.5 protein_coding 58889171,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683 58889353,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911179 Gene ID= ENSG00000087460.24 TPM= 141.46 Transcript Type= processed_transcript chr20 58891303 58911192 58891303 58911192 + ENST00000371085.7@GNAS ENST00000371085.7 protein_coding 58891303,58895612,58898941,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683 58891865,58895684,58898985,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192 Gene ID= ENSG00000087460.24 TPM= 671.2 Transcript Type= protein_coding chr20 58891364 58911192 58891364 58911192 + ENST00000265620.11@GNAS ENST00000265620.11 protein_coding 58891364,58895612,58903531,58903672,58905383,58909162,58909350,58909521,58909684,58909951,58910334,58910683 58891865,58895684,58903585,58903791,58905480,58909216,58909423,58909579,58909804,58910081,58910401,58911192 Gene ID= ENSG00000087460.24 TPM= 1012.22 Transcript Type= protein_coding chr20 58981222 58995129 58981222 58995129 + transcript2240.chr20.nic@NELFCD transcript2240.chr20.nic protein_coding 58981222,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642 58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993675,58994239,58995129 Gene ID= ENSG00000101158.13 TPM= 11.93 Transcript Type= NA chr20 58981222 58995129 58981222 58995129 + transcript2245.chr20.nic@NELFCD transcript2245.chr20.nic protein_coding 58981222,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994642 58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58994239,58995129 Gene ID= ENSG00000101158.13 TPM= 6.04 Transcript Type= NA chr20 58981208 58995133 58981208 58995133 + ENST00000602795.5@NELFCD ENST00000602795.5 protein_coding 58981208,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642 58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58995133 Gene ID= ENSG00000101158.13 TPM= 168.59 Transcript Type= protein_coding chr20 58981275 58995133 58981275 58995133 + ENST00000460601.5@NELFCD ENST00000460601.5 protein_coding 58981275,58986093,58986754,58987708,58988914,58989488,58989858,58990910,58991312,58991881,58992998,58993449,58993624,58994110,58994642,58994926 58981369,58986208,58986863,58987817,58989021,58989640,58989988,58991075,58991446,58992020,58993112,58993544,58993764,58994239,58994824,58995133 Gene ID= ENSG00000101158.13 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr20 58995185 59007247 58995185 59007247 - ENST00000217131.5@CTSZ ENST00000217131.5 protein_coding 59006986,59006322,59001465,58997603,58996639,58995185 59007247,59006485,59001644,58997753,58996801,58995759 Gene ID= ENSG00000101160.13 TPM= 2.26 Transcript Type= protein_coding chr20 58996587 59007230 58996587 59007230 - ENST00000503833.6@CTSZ ENST00000503833.6 protein_coding 59006986,59006322,59001465,58997603,58996587 59007230,59006485,59001644,58997753,58996801 Gene ID= ENSG00000101160.13 TPM= 3.17 Transcript Type= retained_intron chr20 59025467 59032382 59025467 59032382 - ENST00000243997.7@ATP5E ENST00000243997.7 protein_coding 59032220,59030303,59025467 59032382,59030429,59028841 Gene ID= ENSG00000124172.9 TPM= 392.1 Transcript Type= protein_coding chr20 59028678 59032345 59028678 59032345 - ENST00000395659.1@ATP5E ENST00000395659.1 protein_coding 59032220,59028678 59032345,59030429 Gene ID= ENSG00000124172.9 TPM= 6.34 Transcript Type= protein_coding chr20 59033145 59042909 59033145 59042909 - ENST00000355937.8@PRELID3B ENST00000355937.8 protein_coding 59042699,59038466,59037191,59036690,59036471,59033145 59042909,59038634,59037280,59036760,59036573,59035126 Gene ID= ENSG00000101166.15 TPM= 66.1 Transcript Type= protein_coding chr20 59034634 59042805 59034634 59042805 - ENST00000371033.9@PRELID3B ENST00000371033.9 protein_coding 59042699,59038466,59036690,59036471,59034634 59042805,59038634,59036760,59036573,59035126 Gene ID= ENSG00000101166.15 TPM= 4.53 Transcript Type= protein_coding chr20 59577456 59847709 59577456 59847709 + transcript2272.chr20.nic@PHACTR3 transcript2272.chr20.nic protein_coding 59577456,59743107,59747758,59755182,59773279,59774243,59806041,59836505,59840369,59841395,59845189,59847115 59577617,59743268,59747835,59755364,59773453,59774490,59806194,59836560,59840430,59841535,59845265,59847709 Gene ID= ENSG00000087495.16 TPM= 1.81 Transcript Type= NA chr20 59940439 59948680 59940439 59948680 + ENST00000360816.7@FAM217B ENST00000360816.7 protein_coding 59940439,59942198,59942427,59943940 59940535,59942309,59942512,59948680 Gene ID= ENSG00000196227.10 TPM= 2.72 Transcript Type= protein_coding chr20 61974798 62065810 61974798 62065810 - ENST00000252996.8@TAF4 ENST00000252996.8 protein_coding 62064451,62014547,62012815,62010046,62009052,62007547,62006510,62003731,62003160,62000552,62000124,61998983,61998136,61997550,61974798 62065810,62014707,62012934,62010165,62009174,62007636,62006758,62003878,62003274,62000721,62000254,61999108,61998192,61997669,61976335 Gene ID= ENSG00000130699.18 TPM= 3.62 Transcript Type= protein_coding chr20 62136735 62143430 62136735 62143430 - ENST00000370873.8@PSMA7 ENST00000370873.8 protein_coding 62143208,62140818,62139781,62139075,62138171,62137364,62136735 62143430,62140944,62139905,62139197,62138290,62137426,62136949 Gene ID= ENSG00000101182.14 TPM= 355.13 Transcript Type= protein_coding chr20 62183011 62203566 62183011 62203566 + transcript2288.chr20.nic@MTG2 transcript2288.chr20.nic protein_coding 62183011,62193416,62195802,62197852,62198634,62199119,62200683,62203084 62183057,62193624,62195949,62197967,62198852,62199257,62202843,62203566 Gene ID= ENSG00000101181.17 TPM= 58.86 Transcript Type= NA chr20 62183011 62203566 62183011 62203566 + transcript2289.chr20.nnic@MTG2 transcript2289.chr20.nnic protein_coding 62183011,62193416,62195802,62197852,62198634,62199119,62200683,62203165 62183057,62193624,62195949,62197967,62198852,62199257,62202843,62203566 Gene ID= ENSG00000101181.17 TPM= 29.88 Transcript Type= NA chr20 62238485 62296212 62238485 62296212 + ENST00000313733.7@OSBPL2 ENST00000313733.7 protein_coding 62238485,62256057,62259981,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785 62238597,62256221,62260125,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296212 Gene ID= ENSG00000130703.15 TPM= 66.86 Transcript Type= protein_coding chr20 62238570 62296213 62238570 62296213 + transcript2302.chr20.nnic@OSBPL2 transcript2302.chr20.nnic protein_coding 62238570,62256057,62259981,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62289207,62291703,62293785 62238597,62256221,62260125,62263691,62272259,62273406,62280122,62281165,62281879,62286711,62289330,62291793,62296213 Gene ID= ENSG00000130703.15 TPM= 3.92 Transcript Type= NA chr20 62238553 62296213 62238553 62296213 + transcript2303.chr20.nnic@OSBPL2 transcript2303.chr20.nnic protein_coding 62238553,62256057,62263616,62272125,62273309,62279157,62281058,62281790,62284046,62286583,62289207,62291703,62293785 62238597,62256221,62263691,62272259,62273406,62279339,62281165,62281879,62284169,62286711,62289330,62291793,62296213 Gene ID= ENSG00000130703.15 TPM= 4.37 Transcript Type= NA chr20 62302093 62308862 62302093 62308862 + ENST00000491935.5@ADRM1 ENST00000491935.5 protein_coding 62302093,62302896,62303568,62304461,62306197,62306648,62307371,62307596,62308021,62308368,62308655 62302142,62303049,62303781,62304577,62306320,62306734,62307452,62307828,62308178,62308470,62308862 Gene ID= ENSG00000130706.12 TPM= 278.91 Transcript Type= protein_coding chr20 62387116 62388519 62387116 62388519 + ENST00000343986.8@RPS21 ENST00000343986.8 protein_coding 62387116,62387321,62387611,62387843,62388309,62388457 62387136,62387388,62387674,62387914,62388364,62388519 Gene ID= ENSG00000171858.17 TPM= 224.58 Transcript Type= protein_coding chr20 62387123 62388519 62387123 62388519 + ENST00000492356.2@RPS21 ENST00000492356.2 protein_coding 62387123,62387321,62387611,62387843,62388309 62387136,62387388,62387674,62387914,62388519 Gene ID= ENSG00000171858.17 TPM= 3.62 Transcript Type= processed_transcript chr20 62388632 62407285 62388632 62407285 - ENST00000279101.9@CABLES2 ENST00000279101.9 protein_coding 62406915,62396521,62396315,62394937,62394157,62393440,62392920,62392389,62391249,62388632 62407285,62396592,62396407,62395014,62394265,62393605,62393023,62392495,62391453,62391111 Gene ID= ENSG00000149679.11 TPM= 10.87 Transcript Type= protein_coding chr20 62463497 62476117 62463497 62476117 - transcript2321.chr20.nic@GATA5 transcript2321.chr20.nic protein_coding 62474999,62473403,62466426,62465834,62465340,62463497 62476117,62473578,62466551,62465921,62465464,62464991 Gene ID= ENSG00000130700.6 TPM= 2.72 Transcript Type= NA chr20 62463497 62475970 62463497 62475970 - ENST00000252997.2@GATA5 ENST00000252997.2 protein_coding 62475930,62474999,62473403,62466426,62465834,62465340,62463497 62475970,62475542,62473578,62466551,62465921,62465464,62464991 Gene ID= ENSG00000130700.6 TPM= 12.68 Transcript Type= protein_coding chr20 62642445 62672295 62642445 62672295 + ENST00000217159.5@SLCO4A1 ENST00000217159.5 protein_coding 62642445,62656359,62658677,62660412,62661064,62664934,62666380,62667745,62668012,62668477,62668930,62671750 62642553,62657250,62658767,62660533,62661175,62665088,62666575,62667910,62668184,62668541,62669078,62672295 Gene ID= ENSG00000101187.15 TPM= 9.06 Transcript Type= protein_coding chr20 62796438 62800581 62796438 62800581 + transcript2330.chr20.nnic@MRGBP transcript2330.chr20.nnic protein_coding 62796438,62797110,62798587,62798853,62799456 62796671,62797231,62798668,62799049,62800581 Gene ID= ENSG00000101189.6 TPM= 2.26 Transcript Type= NA chr20 62796438 62800581 62796438 62800581 + transcript2333.chr20.nic@MRGBP transcript2333.chr20.nic protein_coding 62796438,62797110,62798587,62799456 62796671,62797231,62799049,62800581 Gene ID= ENSG00000101189.6 TPM= 2.26 Transcript Type= NA chr20 62804835 62814000 62804835 62814000 + ENST00000290291.10@OGFR ENST00000290291.10 protein_coding 62804835,62807537,62808247,62809585,62810499,62811462,62812230 62805030,62807605,62808325,62809663,62810565,62811610,62814000 Gene ID= ENSG00000060491.16 TPM= 171.15 Transcript Type= protein_coding chr20 62819629 62841158 62819629 62841158 + transcript2338.chr20.nnic@COL9A3 transcript2338.chr20.nnic protein_coding 62819629,62819929,62821181,62821507,62821757,62822111,62822591,62824445,62824968,62825817,62826204,62826767,62827241,62827923,62828764,62828923,62829455,62829628,62829766,62830360,62830517,62832154,62833020,62835921,62836187,62836478,62837083,62838684,62840542 62819703,62819982,62821216,62821530,62821810,62822164,62822632,62824501,62825021,62825870,62826257,62826820,62827294,62827976,62828817,62828976,62829499,62829681,62829819,62830413,62830588,62832189,62833064,62835953,62836333,62836532,62837265,62838761,62841158 Gene ID= ENSG00000092758.15 TPM= 2.72 Transcript Type= NA chr20 62851496 62861824 62851496 62861824 - transcript2341.chr20.nnic@TCFL5 transcript2341.chr20.nnic protein_coding 62861024,62860125,62859364,62857395,62854016,62851496 62861824,62860308,62859526,62857638,62854157,62852888 Gene ID= ENSG00000101190.12 TPM= 1.81 Transcript Type= NA chr20 62841115 62861763 62841115 62861763 - ENST00000335351.7@TCFL5 ENST00000335351.7 protein_coding 62861024,62860125,62859364,62857395,62854016,62841115 62861763,62860308,62859526,62857638,62854157,62842097 Gene ID= ENSG00000101190.12 TPM= 3.62 Transcript Type= protein_coding chr20 62877738 62937952 62877738 62937952 - ENST00000266070.8@DIDO1 ENST00000266070.8 protein_coding 62937796,62914210,62910774,62909699,62907147,62905887,62896531,62896233,62895049,62894810,62894413,62893666,62892809,62891987,62890960,62877738 62937952,62914406,62911614,62910020,62907359,62906100,62896996,62896392,62895165,62894914,62894548,62894194,62892962,62892076,62891155,62882414 Gene ID= ENSG00000101191.16 TPM= 10.87 Transcript Type= protein_coding chr20 62904998 62937952 62904998 62937952 - ENST00000370371.8@DIDO1 ENST00000370371.8 protein_coding 62937796,62914210,62910774,62909699,62907147,62904998 62937952,62914406,62911614,62910020,62907359,62906100 Gene ID= ENSG00000101191.16 TPM= 3.02 Transcript Type= protein_coding chr20 62877743 62926503 62877743 62926503 - ENST00000395343.5@DIDO1 ENST00000395343.5 protein_coding 62926439,62914210,62910774,62909699,62907147,62905887,62896531,62896233,62895049,62894810,62894413,62893666,62892809,62891987,62890960,62877743 62926503,62914406,62911614,62910020,62907359,62906100,62896996,62896392,62895165,62894914,62894548,62894194,62892962,62892076,62891155,62882414 Gene ID= ENSG00000101191.16 TPM= 13.58 Transcript Type= protein_coding chr20 62905005 62926469 62905005 62926469 - ENST00000354665.8@DIDO1 ENST00000354665.8 protein_coding 62926432,62914210,62910774,62909699,62907147,62905005 62926469,62914406,62911614,62910020,62907359,62906100 Gene ID= ENSG00000101191.16 TPM= 9.35 Transcript Type= protein_coding chr20 62905003 62926471 62905003 62926471 - ENST00000370368.5@DIDO1 ENST00000370368.5 protein_coding 62926439,62914210,62910774,62909699,62907147,62905003 62926471,62914406,62911614,62910020,62907359,62906100 Gene ID= ENSG00000101191.16 TPM= 9.35 Transcript Type= protein_coding chr20 62938119 62948475 62938119 62948475 + ENST00000266069.4@GID8 ENST00000266069.4 protein_coding 62938119,62941491,62942987,62943495,62944739 62938253,62941620,62943183,62943692,62948475 Gene ID= ENSG00000101193.7 TPM= 41.66 Transcript Type= protein_coding chr20 63195432 63216210 63195432 63216210 - transcript2366.chr20.nnic@YTHDF1 transcript2366.chr20.nnic protein_coding 63215866,63215577,63213864,63202287,63196455,63195432 63216210,63215601,63213943,63203807,63196734,63195770 Gene ID= ENSG00000149658.17 TPM= 6.34 Transcript Type= NA chr20 63195430 63216210 63195430 63216210 - transcript2367.chr20.nnic@YTHDF1 transcript2367.chr20.nnic protein_coding 63215866,63215448,63213864,63202287,63195430 63216210,63215601,63213943,63203807,63196734 Gene ID= ENSG00000149658.17 TPM= 5.43 Transcript Type= NA chr20 63195429 63216234 63195429 63216234 - ENST00000370339.7@YTHDF1 ENST00000370339.7 protein_coding 63215866,63215577,63213864,63202287,63195429 63216234,63215601,63213943,63203807,63196734 Gene ID= ENSG00000149658.17 TPM= 70.63 Transcript Type= protein_coding chr20 63195430 63216183 63195430 63216183 - transcript2369.chr20.nnic@YTHDF1 transcript2369.chr20.nnic protein_coding 63215866,63215577,63213864,63202287,63195430 63216183,63215635,63213943,63203807,63196734 Gene ID= ENSG00000149658.17 TPM= 4.53 Transcript Type= NA chr20 63272775 63289789 63272775 63289789 + transcript2376.chr20.nic@ARFGAP1 transcript2376.chr20.nic protein_coding 63272775,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63286366,63287564,63289678 63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286442,63289496,63289789 Gene ID= ENSG00000101199.12 TPM= 2.72 Transcript Type= NA chr20 63272775 63289791 63272775 63289791 + transcript2383.chr20.nic@ARFGAP1 transcript2383.chr20.nic protein_coding 63272775,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63285654,63286366,63287564 63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63284922,63285713,63286442,63289791 Gene ID= ENSG00000101199.12 TPM= 6.11 Transcript Type= NA chr20 63272775 63289791 63272775 63289791 + transcript2384.chr20.nic@ARFGAP1 transcript2384.chr20.nic protein_coding 63272775,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63285654,63287564 63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63284922,63286442,63289791 Gene ID= ENSG00000101199.12 TPM= 10.19 Transcript Type= NA chr20 63284292 63289788 63284292 63289788 + ENST00000468975.6@ARFGAP1 ENST00000468975.6 protein_coding 63284292,63284866,63285654,63286366,63287564 63284512,63284922,63285713,63286442,63289788 Gene ID= ENSG00000101199.12 TPM= 3.17 Transcript Type= processed_transcript chr20 63272785 63289793 63272785 63289793 + ENST00000370283.8@ARFGAP1 ENST00000370283.8 protein_coding 63272785,63275577,63276091,63276480,63277205,63278117,63278899,63281291,63282819,63284866,63285654,63286366,63287564 63272920,63275640,63276200,63276651,63277305,63278203,63278995,63281347,63282851,63284922,63285713,63286442,63289793 Gene ID= ENSG00000101199.12 TPM= 86.71 Transcript Type= protein_coding chr20 63488013 63499315 63488013 63499315 - ENST00000217182.4@EEF1A2 ENST00000217182.4 protein_coding 63499058,63497620,63495856,63494805,63493137,63490479,63488918,63488013 63499315,63497834,63496035,63495101,63493287,63490735,63489152,63488425 Gene ID= ENSG00000101210.10 TPM= 153.94 Transcript Type= protein_coding chr20 63520724 63522206 63520724 63522206 + ENST00000370179.7@PPDPF ENST00000370179.7 protein_coding 63520724,63521284,63521512,63521668 63520894,63521363,63521589,63522206 Gene ID= ENSG00000125534.9 TPM= 38.03 Transcript Type= protein_coding chr20 63528425 63537370 63528425 63537370 - ENST00000217185.3@PTK6 ENST00000217185.3 protein_coding 63537085,63534152,63533551,63532526,63530746,63530078,63528425 63537370,63534315,63533704,63532687,63530927,63530231,63529723 Gene ID= ENSG00000101213.6 TPM= 1.81 Transcript Type= protein_coding chr20 63570126 63574239 63570126 63574239 - ENST00000479540.5@HELZ2 ENST00000479540.5 protein_coding 63574184,63570685,63570126 63574239,63573221,63570611 Gene ID= ENSG00000130589.16 TPM= 1.81 Transcript Type= processed_transcript chr20 63587602 63627041 63587602 63627041 - ENST00000370077.1@GMEB2 ENST00000370077.1 protein_coding 63626956,63619267,63604743,63602965,63597757,63595610,63593011,63592533,63592022,63587602 63627041,63619454,63604840,63603092,63597860,63595767,63593082,63592670,63592144,63590729 Gene ID= ENSG00000101216.10 TPM= 15.39 Transcript Type= protein_coding chr20 63627250 63628707 63627250 63628707 + ENST00000411579.1@MHENCR ENST00000411579.1 antisense_RNA 63627250,63628269 63627392,63628707 Gene ID= ENSG00000232442.1 TPM= 1.81 Transcript Type= antisense_RNA chr20 63639708 63653427 63639708 63653427 - ENST00000370053.2@STMN3 ENST00000370053.2 protein_coding 63653327,63644214,63643756,63642108,63639708 63653427,63644309,63643931,63642299,63641397 Gene ID= ENSG00000197457.9 TPM= 156.21 Transcript Type= protein_coding chr20 63657810 63696253 63657810 63696253 + ENST00000370018.7@RTEL1 ENST00000370018.7 protein_coding 63657810,63659233,63661298,63661850,63662546,63662829,63666004,63667469,63672556,63673940,63678145,63678268,63679849,63680664,63685523,63685791,63687638,63687937,63688139,63688301,63688528,63689055,63689502,63689750,63690087,63690294,63690805,63691742,63692805,63693143,63694372,63694741,63695066,63695328,63695778 63658466,63659504,63661496,63661943,63662627,63662889,63666079,63667553,63672621,63674093,63678183,63678346,63679946,63680719,63685597,63685872,63687770,63688050,63688179,63688386,63688605,63689132,63689648,63689865,63690210,63690441,63690947,63691837,63693003,63693283,63694488,63694974,63695221,63695480,63696253 Gene ID= ENSG00000258366.7 TPM= 8.6 Transcript Type= protein_coding chr20 63658312 63696253 63658312 63696253 + ENST00000360203.9@RTEL1 ENST00000360203.9 protein_coding 63658312,63659233,63661298,63661850,63662546,63662829,63666004,63667469,63672556,63673940,63678145,63678268,63679849,63680664,63685523,63685791,63687638,63687937,63688139,63688301,63688528,63689055,63689502,63689750,63690087,63690294,63690805,63691742,63692805,63693143,63694372,63694741,63695066,63695328,63695778 63658466,63659504,63661496,63661943,63662627,63662889,63666079,63667553,63672621,63674093,63678183,63678346,63679946,63680719,63685597,63685872,63687770,63688050,63688179,63688386,63688605,63689132,63689648,63689865,63690210,63690441,63690947,63691837,63693003,63693283,63694488,63694974,63695221,63695650,63696253 Gene ID= ENSG00000258366.7 TPM= 7.7 Transcript Type= protein_coding chr20 63696668 63698684 63696668 63698684 + ENST00000369996.1@TNFRSF6B ENST00000369996.1 protein_coding 63696668,63697328,63698280 63697191,63697522,63698684 Gene ID= ENSG00000243509.4 TPM= 3.62 Transcript Type= protein_coding chr20 63698631 63708454 63698631 63708454 - transcript2430.chr20.nic@ARFRP1 transcript2430.chr20.nic protein_coding 63707867,63706999,63706651,63706357,63702136,63701830,63700602,63698631 63708454,63707092,63706738,63706439,63702217,63701900,63700702,63700530 Gene ID= ENSG00000101246.19 TPM= 27.92 Transcript Type= NA chr20 63698643 63708013 63698643 63708013 - ENST00000622789.4@ARFRP1 ENST00000622789.4 protein_coding 63707867,63706999,63706651,63706357,63702136,63701830,63700602,63698643 63708013,63707097,63706738,63706439,63702217,63701900,63700702,63700530 Gene ID= ENSG00000101246.19 TPM= 36.07 Transcript Type= protein_coding chr20 63699456 63707838 63699456 63707838 - ENST00000618838.4@ARFRP1 ENST00000618838.4 protein_coding 63707810,63706999,63706651,63706357,63702136,63701830,63700602,63699456 63707838,63707092,63706738,63706439,63702217,63701900,63700702,63700530 Gene ID= ENSG00000101246.19 TPM= 8 Transcript Type= protein_coding chr20 63699478 63707916 63699478 63707916 - ENST00000612157.4@ARFRP1 ENST00000612157.4 protein_coding 63707867,63706999,63706651,63706357,63702136,63701830,63699478 63707916,63707097,63706738,63706439,63702217,63701900,63700702 Gene ID= ENSG00000101246.19 TPM= 4.07 Transcript Type= protein_coding chr20 63707465 63736141 63707465 63736141 + ENST00000448100.6@ZGPAT ENST00000448100.6 protein_coding 63707465,63708553,63733219,63733587,63734705,63735159,63735781 63707559,63709164,63733352,63733739,63734824,63735564,63736141 Gene ID= ENSG00000197114.11 TPM= 2.67 Transcript Type= protein_coding chr20 63708035 63736142 63708035 63736142 + ENST00000355969.10@ZGPAT ENST00000355969.10 protein_coding 63708035,63708553,63733219,63733587,63734705,63735159,63735781 63708118,63709164,63733352,63733739,63734824,63735564,63736142 Gene ID= ENSG00000197114.11 TPM= 43.42 Transcript Type= protein_coding chr20 63708039 63736141 63708039 63736141 + ENST00000477340.5@ZGPAT ENST00000477340.5 protein_coding 63708039,63708553,63733219,63733587,63735159,63735781 63708118,63709164,63733352,63734824,63735564,63736141 Gene ID= ENSG00000197114.11 TPM= 6.6 Transcript Type= retained_intron chr20 63708086 63736142 63708086 63736142 + ENST00000369967.7@ZGPAT ENST00000369967.7 protein_coding 63708086,63708553,63733219,63733587,63734705,63735159,63735781 63708188,63709164,63733352,63733739,63734824,63735564,63736142 Gene ID= ENSG00000197114.11 TPM= 8.1 Transcript Type= protein_coding chr20 63708090 63736141 63708090 63736141 + ENST00000328969.5@ZGPAT ENST00000328969.5 protein_coding 63708090,63708553,63733219,63733587,63734645,63735159,63735781 63708188,63709164,63733352,63733739,63734824,63735564,63736141 Gene ID= ENSG00000197114.11 TPM= 1.17 Transcript Type= protein_coding chr20 63708053 63736142 63708053 63736142 + ENST00000357119.8@ZGPAT ENST00000357119.8 protein_coding 63708053,63708553,63733219,63733587,63734705,63735159,63735781 63708188,63709164,63733352,63733712,63734824,63735564,63736142 Gene ID= ENSG00000197114.11 TPM= 2.98 Transcript Type= protein_coding chr20 63708864 63739103 63708864 63739103 + ENST00000490623.3@AL121845.3 ENST00000490623.3 protein_coding 63708864,63733219,63733587,63734705,63735159,63735781,63737533,63737821,63738008,63738183,63738598 63709164,63733352,63733739,63734824,63735564,63736712,63737647,63737902,63738060,63738499,63739103 Gene ID= ENSG00000273154.3 TPM= 2.07 Transcript Type= nonsense_mediated_decay chr20 63739748 63743968 63739748 63743968 + transcript2453.chr20.nic@SLC2A4RG transcript2453.chr20.nic protein_coding 63739748,63740377,63741370,63741869,63742130,63742699,63742879 63740038,63740531,63741479,63742056,63742615,63742790,63743968 Gene ID= ENSG00000125520.13 TPM= 3.92 Transcript Type= NA chr20 63739748 63743968 63739748 63743968 + transcript2454.chr20.nic@SLC2A4RG transcript2454.chr20.nic protein_coding 63739748,63740377,63741869,63742130,63742336,63742699,63742879 63740038,63741479,63742056,63742230,63742615,63742790,63743968 Gene ID= ENSG00000125520.13 TPM= 3.92 Transcript Type= NA chr20 63740237 63743968 63740237 63743968 + transcript2455.chr20.nic@SLC2A4RG transcript2455.chr20.nic protein_coding 63740237,63741370,63741869,63742130,63742336,63742699,63742879 63740531,63741479,63742056,63742230,63742615,63742790,63743968 Gene ID= ENSG00000125520.13 TPM= 7.54 Transcript Type= NA chr20 63739861 63743505 63739861 63743505 + ENST00000266077.4@SLC2A4RG ENST00000266077.4 protein_coding 63739861,63740377,63741370,63741869,63742130,63742336,63742699,63742879 63740038,63740531,63741479,63742056,63742230,63742615,63742790,63743505 Gene ID= ENSG00000125520.13 TPM= 26.26 Transcript Type= protein_coding chr20 63865228 63891545 63865228 63891545 + ENST00000611972.4@TPD52L2 ENST00000611972.4 protein_coding 63865228,63869296,63873668,63889190,63889850 63865384,63869441,63873816,63889238,63891545 Gene ID= ENSG00000101150.17 TPM= 2.9 Transcript Type= protein_coding chr20 63865290 63891545 63865290 63891545 + ENST00000346249.8@TPD52L2 ENST00000346249.8 protein_coding 63865290,63869296,63873668,63875816,63882719,63889190,63889850 63865384,63869441,63873816,63875875,63882820,63889238,63891545 Gene ID= ENSG00000101150.17 TPM= 173.14 Transcript Type= protein_coding chr20 63865290 63891545 63865290 63891545 + ENST00000348257.9@TPD52L2 ENST00000348257.9 protein_coding 63865290,63869296,63873668,63882719,63889190,63889850 63865384,63869441,63873816,63882820,63889238,63891545 Gene ID= ENSG00000101150.17 TPM= 43.65 Transcript Type= protein_coding chr20 63895182 63936031 63895182 63936031 + ENST00000470551.1@DNAJC5 ENST00000470551.1 protein_coding 63895182,63928335,63929312,63930851,63931109,63931465 63895323,63928452,63929525,63931022,63931182,63936031 Gene ID= ENSG00000101152.10 TPM= 30.79 Transcript Type= nonsense_mediated_decay chr20 63895182 63936031 63895182 63936031 + ENST00000360864.8@DNAJC5 ENST00000360864.8 protein_coding 63895182,63928335,63929312,63930851,63931465 63895323,63928452,63929525,63931022,63936031 Gene ID= ENSG00000101152.10 TPM= 47.99 Transcript Type= protein_coding chr20 63939829 63956415 63939829 63956415 - ENST00000354216.10@UCKL1 ENST00000354216.10 protein_coding 63956260,63946453,63946161,63945805,63945651,63944545,63944397,63943653,63941110,63940950,63940794,63940594,63940378,63940150,63939829 63956415,63946643,63946267,63945975,63945722,63944734,63944458,63943669,63941208,63941043,63940856,63940716,63940485,63940306,63940055 Gene ID= ENSG00000198276.15 TPM= 64.29 Transcript Type= protein_coding chr20 63974113 63979642 63974113 63979642 - ENST00000369886.7@SAMD10 ENST00000369886.7 protein_coding 63979377,63977225,63976971,63975692,63974113 63979642,63977406,63977142,63975832,63975532 Gene ID= ENSG00000130590.13 TPM= 8.15 Transcript Type= protein_coding chr20 63981135 64033100 63981135 64033100 + ENST00000266079.4@PRPF6 ENST00000266079.4 protein_coding 63981135,63983047,63984907,63993407,63994916,63995327,63999045,63999603,64001077,64010200,64011285,64016723,64022757,64024555,64025939,64026982,64027603,64028478,64029377,64031918,64032841 63981316,63983215,63985025,63993485,63995092,63995482,63999139,63999759,64001239,64010318,64011503,64016845,64022878,64024693,64026058,64027158,64027736,64028569,64029491,64032044,64033100 Gene ID= ENSG00000101161.7 TPM= 265.32 Transcript Type= protein_coding chr20 64047582 64049641 64047582 64049641 - ENST00000340356.8@SOX18 ENST00000340356.8 protein_coding 64049159,64047582 64049641,64048962 Gene ID= ENSG00000203883.6 TPM= 55.24 Transcript Type= protein_coding chr20 64056660 64072352 64056660 64072352 + transcript2518.chr20.nnic@TCEA2 transcript2518.chr20.nnic protein_coding 64056660,64059613,64059917,64062430,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172 64058887,64059713,64060135,64062503,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072352 Gene ID= ENSG00000171703.16 TPM= 1.81 Transcript Type= NA chr20 64063187 64072352 64063187 64072352 + transcript2520.chr20.nic@TCEA2 transcript2520.chr20.nic protein_coding 64063187,64063892,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172 64063384,64063949,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072352 Gene ID= ENSG00000171703.16 TPM= 1.81 Transcript Type= NA chr20 64063089 64072352 64063089 64072352 + transcript2526.chr20.nic@TCEA2 transcript2526.chr20.nic protein_coding 64063089,64066476,64066915,64068047,64069361,64069765,64070489,64071870,64072172 64063384,64066538,64067020,64068134,64069491,64070414,64070635,64071941,64072352 Gene ID= ENSG00000171703.16 TPM= 1.81 Transcript Type= NA chr20 64063144 64072346 64063144 64072346 + ENST00000343484.9@TCEA2 ENST00000343484.9 protein_coding 64063144,64066476,64066915,64068047,64069361,64069765,64070260,64070489,64071870,64072172 64063384,64066538,64067020,64068134,64069491,64069821,64070414,64070635,64071941,64072346 Gene ID= ENSG00000171703.16 TPM= 47.99 Transcript Type= protein_coding chr20 64063196 64064123 64063196 64064123 + ENST00000476113.1@TCEA2 ENST00000476113.1 protein_coding 64063196,64063892 64063384,64064123 Gene ID= ENSG00000171703.16 TPM= 15.39 Transcript Type= processed_transcript chr20 64073183 64079608 64073183 64079608 - transcript2532.chr20.nnic@RGS19 transcript2532.chr20.nnic protein_coding 64079151,64076857,64076525,64074467,64074144,64073183 64079608,64076954,64076646,64074541,64074378,64074044 Gene ID= ENSG00000171700.13 TPM= 1.97 Transcript Type= NA chr20 64073183 64077247 64073183 64077247 - transcript2535.chr20.nic@RGS19 transcript2535.chr20.nic protein_coding 64076857,64076525,64074467,64074144,64073183 64077247,64076646,64074541,64074378,64074044 Gene ID= ENSG00000171700.13 TPM= 1.97 Transcript Type= NA chr20 64073183 64079897 64073183 64079897 - transcript2536.chr20.nic@RGS19 transcript2536.chr20.nic protein_coding 64079294,64076525,64074467,64074144,64073183 64079897,64076646,64074541,64074378,64074044 Gene ID= ENSG00000171700.13 TPM= 4.68 Transcript Type= NA chr20 64073183 64080043 64073183 64080043 - transcript2537.chr20.nnic@RGS19 transcript2537.chr20.nnic protein_coding 64079873,64076525,64074467,64074144,64073183 64080043,64076646,64074541,64074378,64074044 Gene ID= ENSG00000171700.13 TPM= 4.68 Transcript Type= NA chr20 64073181 64079988 64073181 64079988 - ENST00000332298.9@RGS19 ENST00000332298.9 protein_coding 64079873,64076857,64076525,64074467,64074144,64073181 64079988,64076954,64076646,64074541,64074378,64074044 Gene ID= ENSG00000171700.13 TPM= 9.21 Transcript Type= protein_coding chr20 64073181 64079492 64073181 64079492 - ENST00000395042.1@RGS19 ENST00000395042.1 protein_coding 64079294,64076857,64076525,64074467,64074144,64073181 64079492,64076954,64076646,64074541,64074378,64074044 Gene ID= ENSG00000171700.13 TPM= 22.79 Transcript Type= protein_coding chr20 64213326 64228102 64213326 64228102 + transcript2547.chr20.nic@MYT1 transcript2547.chr20.nic protein_coding 64213326,64217067,64218911,64219713,64221893,64223111,64223291,64227415,64227888 64213647,64217281,64219035,64219982,64222047,64223173,64223359,64227477,64228102 Gene ID= ENSG00000196132.11 TPM= 1.81 Transcript Type= NA chr20 64213326 64228102 64213326 64228102 + transcript2548.chr20.nic@MYT1 transcript2548.chr20.nic protein_coding 64213326,64217067,64218830,64219713,64221893,64223111,64227415,64227888 64213647,64217281,64219035,64219982,64222047,64223173,64227477,64228102 Gene ID= ENSG00000196132.11 TPM= 1.81 Transcript Type= NA chr20 64213326 64228102 64213326 64228102 + transcript2549.chr20.nic@MYT1 transcript2549.chr20.nic protein_coding 64213326,64217067,64218911,64219713,64221893,64223111,64227415,64227888 64213647,64217281,64219035,64219982,64222047,64223173,64227477,64228102 Gene ID= ENSG00000196132.11 TPM= 2.72 Transcript Type= NA chr20 64255757 64276233 64255757 64276233 + transcript2557.chr20.nic@PCMTD2 transcript2557.chr20.nic protein_coding 64255757,64259942,64264429,64265258,64267887,64273221 64255924,64260272,64264531,64265429,64268010,64276233 Gene ID= ENSG00000203880.11 TPM= 7.54 Transcript Type= NA chr20 64255768 64276230 64255768 64276230 + ENST00000308824.10@PCMTD2 ENST00000308824.10 protein_coding 64255768,64259942,64264429,64265258,64267887,64273221 64255870,64260272,64264531,64265429,64268010,64276230 Gene ID= ENSG00000203880.11 TPM= 40.14 Transcript Type= protein_coding chr20 64255741 64275653 64255741 64275653 + ENST00000369758.8@PCMTD2 ENST00000369758.8 protein_coding 64255741,64259942,64264429,64265258,64267968,64273221 64255870,64260272,64264531,64265429,64268010,64275653 Gene ID= ENSG00000203880.11 TPM= 4.83 Transcript Type= protein_coding chr21 5022494 5036771 5022494 5036771 + ENST00000623960.3@FP565260.3 ENST00000623960.3 protein_coding 5022494,5025009,5026280,5027935,5032053,5033408,5034582 5022693,5025049,5026630,5028225,5032217,5033443,5036771 Gene ID= ENSG00000277117.4 TPM= 5.43 Transcript Type= protein_coding chr21 5116326 5128467 5116326 5128467 - transcript12.chr21.nic@FP565260.6 transcript12.chr21.nic protein_coding 5128214,5127898,5125879,5121711,5118691,5116326 5128467,5127950,5125992,5124875,5118847,5117231 Gene ID= ENSG00000280071.3 TPM= 14.94 Transcript Type= NA chr21 5116341 5128425 5116341 5128425 - ENST00000620528.4@FP565260.6 ENST00000620528.4 protein_coding 5128214,5127898,5125879,5124756,5121711,5118691,5116341 5128425,5127950,5125992,5124875,5121803,5118847,5117231 Gene ID= ENSG00000280071.3 TPM= 263.97 Transcript Type= protein_coding chr21 5130871 5154748 5130871 5154748 - transcript18.chr21.nic@FP565260.1 transcript18.chr21.nic protein_coding 5154623,5152961,5148210,5147779,5147289,5146658,5146137,5144091,5143222,5142532,5141559,5141277,5140953,5139698,5137327,5135935,5135089,5134361,5133902,5133655,5133426,5130871 5154748,5153073,5148304,5147878,5147432,5146793,5146366,5144234,5143292,5142668,5141707,5141424,5141103,5139878,5137474,5136043,5135154,5134479,5134120,5133805,5133500,5131455 Gene ID= ENSG00000275464.4 TPM= 3.62 Transcript Type= NA chr21 5130871 5154734 5130871 5154734 - ENST00000617716.3@FP565260.1 ENST00000617716.3 protein_coding 5154623,5152961,5148210,5147779,5147289,5146658,5146137,5144091,5143222,5142532,5141559,5141277,5140953,5139698,5137327,5135935,5135089,5133902,5133655,5133426,5130871 5154734,5153073,5148304,5147878,5147432,5146793,5146366,5144234,5143292,5142668,5141707,5141424,5141103,5139878,5137474,5136043,5135154,5134120,5133805,5133500,5131455 Gene ID= ENSG00000275464.4 TPM= 78.78 Transcript Type= protein_coding chr21 5499151 5502542 5499151 5502542 - ENST00000624261.1@LINC01670 ENST00000624261.1 lincRNA 5502369,5499999,5499151 5502542,5500101,5499809 Gene ID= ENSG00000279094.3 TPM= 1.36 Transcript Type= lincRNA chr21 5499155 5502497 5499155 5502497 - ENST00000624859.3@LINC01670 ENST00000624859.3 lincRNA 5502369,5500067,5499155 5502497,5500101,5499967 Gene ID= ENSG00000279094.3 TPM= 2.26 Transcript Type= lincRNA chr21 6111134 6123739 6111134 6123739 + ENST00000613488.2@CU639417.2 ENST00000613488.2 protein_coding 6111134,6112070,6112739,6116224,6116462,6116894,6117128,6117804,6118256,6118783,6119024,6119720,6120487,6121144 6111252,6112239,6112855,6116287,6116623,6117018,6117251,6118027,6118402,6118908,6119240,6120001,6120718,6123739 Gene ID= ENSG00000275993.2 TPM= 34.41 Transcript Type= protein_coding chr21 6484623 6499200 6484623 6499200 - ENST00000610664.4@U2AF1L5 ENST00000610664.4 protein_coding 6499129,6495993,6492131,6487363,6487107,6486322,6486138,6484623 6499200,6496080,6492197,6487412,6487205,6486455,6486230,6484916 Gene ID= ENSG00000275895.6 TPM= 19.92 Transcript Type= protein_coding chr21 6667304 6670695 6667304 6670695 - ENST00000623324.1@CU638689.4 ENST00000623324.1 lincRNA 6670522,6668152,6667304 6670695,6668254,6667962 Gene ID= ENSG00000280145.3 TPM= 1.81 Transcript Type= lincRNA chr21 7744971 7772246 7744971 7772246 + ENST00000622934.3@SMIM11B ENST00000622934.3 protein_coding 7744971,7748899,7754952,7769187,7771567 7745038,7748987,7755118,7769375,7772246 Gene ID= ENSG00000273590.4 TPM= 1.81 Transcript Type= protein_coding chr21 7744975 7758627 7744975 7758627 + ENST00000619874.4@SMIM11B ENST00000619874.4 protein_coding 7744975,7748899,7754952,7758105 7745038,7748987,7755118,7758627 Gene ID= ENSG00000273590.4 TPM= 5.43 Transcript Type= protein_coding chr21 8208954 8395465 8208954 8395465 + transcript43.chr21.nnic@FP671120.1 transcript43.chr21.nnic lincRNA 8208954,8253305,8392323 8209103,8253502,8395465 Gene ID= ENSG00000278996.1 TPM= 1013.31 Transcript Type= NA chr21 9068355 9129772 9068355 9129772 - transcript73.chr21.nnic@TEKT4P2 transcript73.chr21.nnic transcribed_unprocessed_pseudogene 9129683,9127489,9070214,9069445,9068355 9129772,9127547,9070444,9069599,9068659 Gene ID= ENSG00000188681.11 TPM= 23.54 Transcript Type= NA chr21 9117190 9129763 9117190 9129763 - transcript81.chr21.nnic@TEKT4P2 transcript81.chr21.nnic transcribed_unprocessed_pseudogene 9129683,9127489,9120855,9117190 9129763,9127547,9121378,9118225 Gene ID= ENSG00000188681.11 TPM= 7.24 Transcript Type= NA chr21 9068356 9129771 9068356 9129771 - transcript82.chr21.nic@TEKT4P2 transcript82.chr21.nic transcribed_unprocessed_pseudogene 9129683,9127489,9068356 9129771,9127547,9070444 Gene ID= ENSG00000188681.11 TPM= 28.98 Transcript Type= NA chr21 9076211 9129772 9076211 9129772 - transcript83.chr21.nnic@TEKT4P2 transcript83.chr21.nnic transcribed_unprocessed_pseudogene 9129683,9127489,9076211 9129772,9127547,9077714 Gene ID= ENSG00000188681.11 TPM= 55.24 Transcript Type= NA chr21 9068361 9129752 9068361 9129752 - ENST00000416067.5@TEKT4P2 ENST00000416067.5 transcribed_unprocessed_pseudogene 9129683,9127489,9070214,9068361 9129752,9127547,9070444,9069599 Gene ID= ENSG00000188681.11 TPM= 13.58 Transcript Type= processed_transcript chr21 14371115 14383187 14371115 14383187 - ENST00000285667.3@HSPA13 ENST00000285667.3 protein_coding 14383095,14381203,14378199,14375652,14371115 14383187,14381543,14378412,14375819,14374284 Gene ID= ENSG00000155304.5 TPM= 33.51 Transcript Type= protein_coding chr21 14485228 14546343 14485228 14546343 - ENST00000400566.5@SAMSN1 ENST00000400566.5 protein_coding 14546205,14521150,14516892,14512444,14510310,14500529,14498442,14485228 14546343,14521221,14517041,14512573,14510461,14500735,14498592,14486114 Gene ID= ENSG00000155307.17 TPM= 11.77 Transcript Type= protein_coding chr21 14818843 15014430 14818843 15014430 - ENST00000432230.6@AF127577.4 ENST00000432230.6 lincRNA 15014344,14857542,14825523,14818843 15014430,14857708,14825624,14824415 Gene ID= ENSG00000235609.7 TPM= 2.72 Transcript Type= lincRNA chr21 15729982 15879709 15729982 15879709 + transcript107.chr21.nnic@USP25 transcript107.chr21.nnic protein_coding 15729982,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15822288,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303 15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15822411,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15879709 Gene ID= ENSG00000155313.15 TPM= 2.11 Transcript Type= NA chr21 15729982 15879709 15729982 15879709 + transcript112.chr21.nnic@USP25 transcript112.chr21.nnic protein_coding 15729982,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303 15730688,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15879709 Gene ID= ENSG00000155313.15 TPM= 2.11 Transcript Type= NA chr21 15729926 15879709 15729926 15879709 + transcript113.chr21.nnic@USP25 transcript113.chr21.nnic protein_coding 15729926,15762891,15765997,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303 15730438,15762968,15766141,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15879709 Gene ID= ENSG00000155313.15 TPM= 3.02 Transcript Type= NA chr21 15730025 15878911 15730025 15878911 + ENST00000285679.10@USP25 ENST00000285679.10 protein_coding 15730025,15762891,15765997,15777904,15791502,15799757,15805121,15808809,15811137,15818698,15824039,15824966,15826204,15826977,15830531,15831401,15833348,15842398,15864268,15866266,15870068,15874403,15877796,15878303 15730438,15762968,15766141,15778027,15791664,15799843,15805258,15808885,15811210,15818846,15824166,15825061,15826365,15827203,15830601,15831629,15833548,15842540,15864446,15866344,15870147,15874526,15877991,15878911 Gene ID= ENSG00000155313.15 TPM= 21.73 Transcript Type= protein_coding chr21 16419601 16607136 16419601 16607136 + transcript117.chr21.nic@MIR99AHG transcript117.chr21.nic lincRNA 16419601,16487490,16537379,16606994 16419741,16487538,16537439,16607136 Gene ID= ENSG00000215386.11 TPM= 2.72 Transcript Type= NA chr21 17513014 17570098 17513014 17570098 + transcript119.chr21.nnic@CXADR transcript119.chr21.nnic protein_coding 17513014,17547027,17551749,17558976,17560702,17561338,17565428,17568150 17513172,17547193,17551953,17559131,17560824,17561476,17565611,17570098 Gene ID= ENSG00000154639.18 TPM= 15.39 Transcript Type= NA chr21 17512382 17570100 17512382 17570100 + ENST00000284878.11@CXADR ENST00000284878.11 protein_coding 17512382,17547027,17551749,17558976,17560702,17561338,17565428 17513172,17547193,17551953,17559131,17560824,17561476,17570100 Gene ID= ENSG00000154639.18 TPM= 47.09 Transcript Type= protein_coding chr21 17593653 17612947 17593653 17612947 - ENST00000348354.6@BTG3 ENST00000348354.6 protein_coding 17612699,17608972,17604860,17598617,17593653 17612947,17609152,17604997,17598824,17594332 Gene ID= ENSG00000154640.14 TPM= 67.01 Transcript Type= protein_coding chr21 17593653 17612844 17593653 17612844 - ENST00000339775.10@BTG3 ENST00000339775.10 protein_coding 17612699,17608972,17604860,17604145,17598617,17593653 17612844,17609152,17604997,17604276,17598824,17594332 Gene ID= ENSG00000154640.14 TPM= 6.34 Transcript Type= protein_coding chr21 17788967 17819386 17788967 17819386 - ENST00000284881.8@C21orf91 ENST00000284881.8 protein_coding 17819303,17818192,17796582,17795208,17788967 17819386,17818325,17797118,17795270,17793581 Gene ID= ENSG00000154642.10 TPM= 4.53 Transcript Type= protein_coding chr21 18244833 18267373 18244833 18267373 + ENST00000299295.6@CHODL ENST00000299295.6 protein_coding 18244833,18256509,18256970,18260200,18262791,18265954 18245302,18256818,18257127,18260286,18262893,18267373 Gene ID= ENSG00000154645.13 TPM= 1.81 Transcript Type= protein_coding chr21 21280576 21540195 21280576 21540195 + ENST00000284894.8@NCAM2 ENST00000284894.8 protein_coding 21280576,21284194,21286269,21292104,21324383,21335505,21338389,21373863,21410274,21418473,21432108,21466606,21468662,21477291,21508851,21534537,21537846 21280652,21284400,21286412,21292241,21324500,21335665,21338534,21374013,21410461,21418569,21432281,21466725,21468783,21477471,21509055,21534656,21540195 Gene ID= ENSG00000154654.14 TPM= 31.01 Transcript Type= protein_coding chr21 21280575 21538775 21280575 21538775 + transcript135.chr21.nnic@NCAM2 transcript135.chr21.nnic protein_coding 21280575,21284194,21286269,21292104,21324383,21335505,21338389,21373863,21410274,21418473,21432108,21466606,21468662,21477291,21508851,21534537,21537846 21280652,21284400,21286412,21292241,21324500,21335665,21338534,21374013,21410461,21418569,21432281,21466725,21468783,21477471,21509055,21534692,21538775 Gene ID= ENSG00000154654.14 TPM= 4.75 Transcript Type= NA chr21 21280575 21486301 21280575 21486301 + transcript136.chr21.nnic@NCAM2 transcript136.chr21.nnic protein_coding 21280575,21284194,21286269,21292104,21324383,21335505,21338389,21373863,21410274,21418473,21432108,21466606,21468662,21477291,21484455 21280652,21284400,21286412,21292241,21324500,21335665,21338534,21374013,21410461,21418569,21432281,21466725,21468783,21477471,21486301 Gene ID= ENSG00000154654.14 TPM= 2.94 Transcript Type= NA chr21 21280575 21509735 21280575 21509735 + transcript137.chr21.nic@NCAM2 transcript137.chr21.nic protein_coding 21280575,21284194,21286269,21292104,21324383,21335505,21338389,21373863,21410274,21418473,21432108,21466606,21468662,21477291,21508851 21280652,21284400,21286412,21292241,21324500,21335665,21338534,21374013,21410461,21418569,21432281,21466725,21468783,21477471,21509735 Gene ID= ENSG00000154654.14 TPM= 2.04 Transcript Type= NA chr21 25585656 25607517 25585656 25607517 - ENST00000352957.8@MRPL39 ENST00000352957.8 protein_coding 25607403,25606449,25603796,25601368,25599799,25597302,25593893,25592812,25588835,25585656 25607517,25606655,25603935,25601467,25599866,25597414,25593958,25592965,25588882,25585754 Gene ID= ENSG00000154719.13 TPM= 62.48 Transcript Type= protein_coding chr21 25639272 25717562 25639272 25717562 + ENST00000480456.5@JAM2 ENST00000480456.5 protein_coding 25639272,25683883,25689866,25693756,25698677,25702170,25705979,25709434,25712340,25714640 25639888,25683948,25689973,25693908,25698879,25702269,25706086,25709449,25712382,25717562 Gene ID= ENSG00000154721.14 TPM= 19.02 Transcript Type= protein_coding chr21 25724480 25734904 25724480 25734904 - ENST00000400094.5@ATP5J ENST00000400094.5 protein_coding 25734853,25734333,25729631,25725226,25724480 25734904,25734375,25729801,25725350,25724677 Gene ID= ENSG00000154723.12 TPM= 5.17 Transcript Type= protein_coding chr21 25724480 25735673 25724480 25735673 - ENST00000400093.3@ATP5J ENST00000400093.3 protein_coding 25734989,25729631,25725226,25724480 25735673,25729801,25725350,25724677 Gene ID= ENSG00000154723.12 TPM= 25.09 Transcript Type= protein_coding chr21 25724480 25734972 25724480 25734972 - ENST00000284971.7@ATP5J ENST00000284971.7 protein_coding 25734853,25729631,25725226,25724480 25734972,25729801,25725350,25724677 Gene ID= ENSG00000154723.12 TPM= 281.36 Transcript Type= protein_coding chr21 25724480 25735639 25724480 25735639 - ENST00000400090.7@ATP5J ENST00000400090.7 protein_coding 25735487,25729631,25725226,25724480 25735639,25729801,25725350,25724677 Gene ID= ENSG00000154723.12 TPM= 16.94 Transcript Type= protein_coding chr21 25724480 25735646 25724480 25735646 - ENST00000400087.7@ATP5J ENST00000400087.7 protein_coding 25735315,25729631,25725226,25724480 25735646,25729801,25725350,25724677 Gene ID= ENSG00000154723.12 TPM= 6.98 Transcript Type= protein_coding chr21 25724480 25735033 25724480 25735033 - ENST00000457143.6@ATP5J ENST00000457143.6 protein_coding 25734939,25729631,25725226,25724480 25735033,25729801,25725350,25724677 Gene ID= ENSG00000154723.12 TPM= 6.08 Transcript Type= protein_coding chr21 25734570 25772460 25734570 25772460 + ENST00000354828.7@GABPA ENST00000354828.7 protein_coding 25734570,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004 25735070,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460 Gene ID= ENSG00000154727.10 TPM= 9.96 Transcript Type= protein_coding chr21 25735384 25772460 25735384 25772460 + ENST00000400075.3@GABPA ENST00000400075.3 protein_coding 25735384,25741573,25745210,25749036,25751989,25758010,25762312,25764210,25764595,25769004 25735578,25741675,25745354,25749120,25752234,25758204,25762365,25764350,25764787,25772460 Gene ID= ENSG00000154727.10 TPM= 24.45 Transcript Type= protein_coding chr21 25880552 26170769 25880552 26170769 - transcript162.chr21.nnic@APP transcript162.chr21.nnic protein_coding 26170564,26111979,26089943,26053236,26051000,26021840,26000015,25997360,25982344,25975954,25975070,25955627,25954590,25911741,25905024,25897573,25891722,25881027,25880552 26170769,26112146,26090072,26053348,26051193,26022042,26000182,25997416,25982477,25976028,25975228,25955755,25954689,25911962,25905077,25897673,25891868,25881771,25880914 Gene ID= ENSG00000142192.20 TPM= 9.96 Transcript Type= NA chr21 25880549 26170820 25880549 26170820 - transcript184.chr21.nnic@APP transcript184.chr21.nnic protein_coding 26170564,26111979,26089943,26053236,26051000,26021840,26000015,25982344,25976008,25880549 26170820,26112146,26090072,26053348,26051193,26022042,26000182,25982477,25976028,25880730 Gene ID= ENSG00000142192.20 TPM= 8.6 Transcript Type= NA chr21 25880550 26170787 25880550 26170787 - ENST00000357903.7@APP ENST00000357903.7 protein_coding 26170564,26111979,26089943,26053236,26051000,26021840,26000015,25982344,25975954,25975070,25955627,25954590,25911741,25905024,25897573,25891722,25880550 26170787,26112146,26090072,26053348,26051193,26022042,26000182,25982477,25976028,25975228,25955755,25954689,25911962,25905077,25897673,25891868,25881771 Gene ID= ENSG00000142192.20 TPM= 122.25 Transcript Type= protein_coding chr21 26170881 26217381 26170881 26217381 + transcript188.chr21.nnic@AP000229.1 transcript188.chr21.nnic lincRNA 26170881,26191749,26215702 26171052,26191821,26217381 Gene ID= ENSG00000273492.5 TPM= 2.72 Transcript Type= NA chr21 26466209 26573284 26466209 26573284 - ENST00000299340.8@CYYR1 ENST00000299340.8 protein_coding 26572868,26566266,26480272,26466209 26573284,26566368,26480429,26468631 Gene ID= ENSG00000166265.11 TPM= 184.73 Transcript Type= protein_coding chr21 26835747 26845409 26835747 26845409 - ENST00000284984.7@ADAMTS1 ENST00000284984.7 protein_coding 26844225,26842339,26841858,26840998,26840276,26839875,26839587,26838439,26835747 26845409,26842685,26841990,26841165,26840562,26840061,26839762,26838614,26838278 Gene ID= ENSG00000154734.14 TPM= 61.58 Transcript Type= protein_coding chr21 26836285 26845410 26836285 26845410 - transcript208.chr21.nic@ADAMTS1 transcript208.chr21.nic protein_coding 26844225,26842339,26841858,26840998,26839875,26839587,26838439,26836285 26845410,26842685,26841990,26841165,26840562,26839762,26838614,26838278 Gene ID= ENSG00000154734.14 TPM= 4.53 Transcript Type= NA chr21 28872191 28885371 28872191 28885371 - ENST00000303775.9@N6AMT1 ENST00000303775.9 protein_coding 28885212,28882985,28882160,28879870,28878192,28872191 28885371,28883071,28882250,28879953,28878333,28876491 Gene ID= ENSG00000156239.11 TPM= 13.58 Transcript Type= protein_coding chr21 28872191 28885371 28872191 28885371 - ENST00000460212.1@N6AMT1 ENST00000460212.1 protein_coding 28885212,28882985,28882160,28879870,28878192,28876312,28872191 28885371,28883071,28882250,28879953,28878333,28876491,28872739 Gene ID= ENSG00000156239.11 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr21 28872191 28885371 28872191 28885371 - ENST00000351429.7@N6AMT1 ENST00000351429.7 protein_coding 28885212,28882985,28882160,28878192,28872191 28885371,28883071,28882250,28878333,28876491 Gene ID= ENSG00000156239.11 TPM= 8.15 Transcript Type= protein_coding chr21 29004384 29019378 29004384 29019378 - ENST00000493196.1@RWDD2B ENST00000493196.1 protein_coding 29019211,29008395,29008240,29007761,29004384 29019378,29008621,29008307,29008123,29006651 Gene ID= ENSG00000156253.6 TPM= 12.68 Transcript Type= protein_coding chr21 29005759 29019359 29005759 29019359 - ENST00000472184.1@RWDD2B ENST00000472184.1 protein_coding 29019211,29008240,29007761,29005759 29019359,29008621,29008123,29006651 Gene ID= ENSG00000156253.6 TPM= 2.72 Transcript Type= retained_intron chr21 29024629 29054488 29024629 29054488 + ENST00000399976.6@USP16 ENST00000399976.6 protein_coding 29024629,29027873,29030595,29034837,29036271,29037276,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066 29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488 Gene ID= ENSG00000156256.14 TPM= 19.92 Transcript Type= protein_coding chr21 29024629 29054488 29024629 29054488 + ENST00000399975.7@USP16 ENST00000399975.7 protein_coding 29024629,29027873,29030595,29034837,29036271,29037279,29038335,29039026,29039481,29040609,29042013,29042472,29043423,29046667,29048761,29050092,29053802,29054066 29024777,29027974,29030773,29034940,29036374,29037463,29038430,29039156,29039568,29040687,29042104,29042528,29043599,29047321,29048855,29050178,29053958,29054488 Gene ID= ENSG00000156256.14 TPM= 22.64 Transcript Type= protein_coding chr21 29056324 29073797 29056324 29073797 - ENST00000286788.8@CCT8 ENST00000286788.8 protein_coding 29073531,29070247,29069423,29067556,29066891,29066716,29064968,29063352,29062490,29062328,29062128,29061496,29061253,29060541,29056324 29073797,29070337,29069502,29067705,29067071,29066777,29065105,29063530,29062556,29062415,29062243,29061567,29061417,29060660,29056552 Gene ID= ENSG00000156261.12 TPM= 303.81 Transcript Type= protein_coding chr21 29056329 29073351 29056329 29073351 - ENST00000626972.2@CCT8 ENST00000626972.2 protein_coding 29073260,29071952,29070247,29069423,29067556,29066891,29066716,29064968,29063352,29062490,29062328,29062128,29061496,29061253,29060541,29056329 29073351,29071988,29070337,29069502,29067705,29067071,29066777,29065105,29063530,29062556,29062415,29062243,29061567,29061417,29060660,29056552 Gene ID= ENSG00000156261.12 TPM= 4.07 Transcript Type= protein_coding chr21 29130485 29175889 29130485 29175889 + ENST00000399928.5@MAP3K7CL ENST00000399928.5 protein_coding 29130485,29133306,29149189,29159941,29174712 29130923,29133414,29149250,29160056,29175889 Gene ID= ENSG00000156265.15 TPM= 1.81 Transcript Type= protein_coding chr21 29298923 29346146 29298923 29346146 + transcript248.chr21.nnic@BACH1 transcript248.chr21.nnic protein_coding 29298923,29321221,29327281,29329487,29342399 29298953,29321514,29327393,29329693,29346146 Gene ID= ENSG00000156273.15 TPM= 3.62 Transcript Type= NA chr21 29298871 29346148 29298871 29346148 + ENST00000286800.7@BACH1 ENST00000286800.7 protein_coding 29298871,29321221,29326059,29329487,29342399 29298953,29321514,29327393,29329693,29346148 Gene ID= ENSG00000156273.15 TPM= 25.36 Transcript Type= protein_coding chr21 31118458 31160909 31118458 31160909 - ENST00000636887.1@TIAM1 ENST00000636887.1 protein_coding 31160445,31154247,31153066,31152636,31146895,31141325,31141118,31135933,31130890,31130213,31127065,31124522,31118458 31160909,31154426,31153134,31152761,31147003,31141504,31141236,31136041,31130948,31130315,31127152,31124694,31120837 Gene ID= ENSG00000156299.13 TPM= 2.72 Transcript Type= protein_coding chr21 31659622 31668931 31659622 31668931 + ENST00000270142.10@SOD1 ENST00000270142.10 protein_coding 31659622,31663790,31666449,31667258,31668471 31659841,31663886,31666518,31667375,31668931 Gene ID= ENSG00000142168.14 TPM= 749.55 Transcript Type= protein_coding chr21 31659709 31668931 31659709 31668931 + ENST00000470944.1@SOD1 ENST00000470944.1 protein_coding 31659709,31663790,31666449,31667258,31668471 31660708,31663886,31666518,31667375,31668931 Gene ID= ENSG00000142168.14 TPM= 4.74 Transcript Type= processed_transcript chr21 31659666 31668931 31659666 31668931 + ENST00000389995.4@SOD1 ENST00000389995.4 protein_coding 31659666,31663790,31666449,31667258,31668471 31659784,31663886,31666518,31667375,31668931 Gene ID= ENSG00000142168.14 TPM= 8.81 Transcript Type= protein_coding chr21 31671038 31732104 31671038 31732104 - transcript265.chr21.nnic@SCAF4 transcript265.chr21.nnic protein_coding 31731663,31706274,31705423,31703765,31702244,31701776,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671038 31732104,31706357,31705467,31703926,31702379,31701918,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685174,31672354 Gene ID= ENSG00000156304.14 TPM= 3.32 Transcript Type= NA chr21 31671033 31732075 31671033 31732075 - ENST00000286835.11@SCAF4 ENST00000286835.11 protein_coding 31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033 31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685240,31672354 Gene ID= ENSG00000156304.14 TPM= 6.04 Transcript Type= protein_coding chr21 31671033 31732075 31671033 31732075 - ENST00000399804.5@SCAF4 ENST00000399804.5 protein_coding 31731663,31706274,31705423,31703765,31702244,31701776,31700995,31696569,31696113,31694813,31694204,31693294,31692349,31691817,31690797,31688307,31685568,31685398,31685049,31671033 31732075,31706357,31705467,31703926,31702379,31701918,31701171,31696750,31696221,31694980,31694289,31693484,31692449,31691930,31690953,31688464,31685733,31685484,31685174,31672354 Gene ID= ENSG00000156304.14 TPM= 4.23 Transcript Type= protein_coding chr21 32268219 32279069 32268219 32279069 - ENST00000290130.3@MIS18A ENST00000290130.3 protein_coding 32278681,32274830,32270407,32269707,32268219 32279069,32274896,32270529,32269803,32269117 Gene ID= ENSG00000159055.3 TPM= 11.77 Transcript Type= protein_coding chr21 32268221 32279061 32268221 32279061 - transcript268.chr21.nic@MIS18A transcript268.chr21.nic protein_coding 32278681,32274830,32268221 32279061,32274896,32270529 Gene ID= ENSG00000159055.3 TPM= 1.81 Transcript Type= NA chr21 32298850 32312290 32298850 32312290 + ENST00000303645.9@MRAP ENST00000303645.9 protein_coding 32298850,32306640,32311684 32299077,32306739,32312290 Gene ID= ENSG00000170262.12 TPM= 253.55 Transcript Type= protein_coding chr21 32601662 32612864 32601662 32612864 - transcript284.chr21.nnic@C21orf59 transcript284.chr21.nnic protein_coding 32612303,32612105,32609838,32607649,32604125,32603161,32602272,32601662 32612864,32612261,32610005,32607716,32604283,32603292,32602367,32601973 Gene ID= ENSG00000159079.18 TPM= 24.15 Transcript Type= NA chr21 32601674 32612534 32601674 32612534 - transcript286.chr21.nnic@C21orf59 transcript286.chr21.nnic protein_coding 32612303,32612105,32609838,32607649,32604125,32603161,32601674 32612534,32612261,32610005,32607716,32604283,32603292,32601973 Gene ID= ENSG00000159079.18 TPM= 2.42 Transcript Type= NA chr21 32601667 32612866 32601667 32612866 - ENST00000290155.7@C21orf59 ENST00000290155.7 protein_coding 32612105,32609838,32607649,32604125,32603161,32602272,32601667 32612866,32610005,32607716,32604283,32603292,32602367,32601973 Gene ID= ENSG00000159079.18 TPM= 17.81 Transcript Type= protein_coding chr21 32628764 32727900 32628764 32727900 - ENST00000630077.2@SYNJ1 ENST00000630077.2 protein_coding 32727837,32726772,32701961,32699838,32695057,32694228,32688306,32686978,32685748,32684038,32681496,32678645,32673340,32670288,32666433,32665943,32664913,32657716,32657003,32656687,32653288,32650184,32646393,32645646,32641896,32639671,32638908,32628764 32727900,32726917,32702047,32700105,32695282,32694311,32688367,32687074,32685917,32684119,32681648,32678810,32673531,32670372,32666573,32666135,32665071,32657872,32657120,32656902,32653366,32650346,32646602,32645789,32641966,32639779,32639125,32631801 Gene ID= ENSG00000159082.17 TPM= 2.72 Transcript Type= protein_coding chr21 32733906 32771815 32733906 32771815 - transcript293.chr21.nic@PAXBP1 transcript293.chr21.nic protein_coding 32771326,32769814,32764348,32762096,32761059,32759080,32755213,32751119,32750917,32748499,32745574,32744792,32743678,32743248,32738173,32737254,32733906 32771815,32769942,32764524,32762317,32761162,32759994,32755353,32751218,32751032,32748698,32745718,32744913,32743754,32743314,32738319,32737408,32735067 Gene ID= ENSG00000159086.14 TPM= 1.81 Transcript Type= NA chr21 32733906 32771748 32733906 32771748 - transcript294.chr21.nic@PAXBP1 transcript294.chr21.nic protein_coding 32771326,32769814,32764348,32762096,32761059,32759080,32755213,32751119,32748499,32745574,32744792,32743678,32743248,32738173,32737254,32733906 32771748,32769942,32764524,32762317,32761162,32759994,32755353,32751218,32748698,32745718,32744913,32743754,32743314,32738319,32737408,32735067 Gene ID= ENSG00000159086.14 TPM= 1.81 Transcript Type= NA chr21 33229901 33262756 33229901 33262756 + ENST00000382264.7@IFNAR2 ENST00000382264.7 protein_coding 33229901,33241886,33243673,33244951,33246718,33248709,33252662,33260597,33262561 33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33262756 Gene ID= ENSG00000159110.19 TPM= 6.34 Transcript Type= protein_coding chr21 33229901 33265679 33229901 33265679 + transcript310.chr21.nic@IFNAR2 transcript310.chr21.nic protein_coding 33229901,33241886,33243673,33244951,33246718,33248709,33252662,33260597,33262793 33230216,33241977,33243714,33245074,33246890,33248854,33252830,33260727,33265679 Gene ID= ENSG00000159110.19 TPM= 1.81 Transcript Type= NA chr21 33229901 33297221 33229901 33297221 + transcript305.chr21.nic@AP000295.1 transcript305.chr21.nic protein_coding 33229901,33241886,33243673,33244951,33246718,33248709,33252662,33268394,33276596,33279752,33283094,33288104,33296184 33230216,33241977,33243714,33245074,33246890,33248854,33252830,33268517,33276753,33279918,33283241,33288261,33297221 Gene ID= ENSG00000249624.8 TPM= 2.72 Transcript Type= NA chr21 33266358 33297234 33266358 33297234 + ENST00000290200.6@IL10RB ENST00000290200.6 protein_coding 33266358,33268394,33276596,33279752,33283094,33288104,33296184 33266514,33268517,33276753,33279918,33283241,33288261,33297234 Gene ID= ENSG00000243646.9 TPM= 38.94 Transcript Type= protein_coding chr21 33324904 33359862 33324904 33359862 + ENST00000270139.7@IFNAR1 ENST00000270139.7 protein_coding 33324904,33335524,33340999,33343268,33343535,33345246,33349091,33349389,33352758,33353638,33355316 33325131,33335647,33341174,33343422,33343676,33345360,33349290,33349543,33352908,33353783,33359862 Gene ID= ENSG00000142166.12 TPM= 37.13 Transcript Type= protein_coding chr21 33402896 33437521 33402896 33437521 + ENST00000290219.10@IFNGR2 ENST00000290219.10 protein_coding 33402896,33414888,33421480,33426884,33432177,33432714,33436828 33403616,33415020,33421685,33427032,33432336,33432871,33437521 Gene ID= ENSG00000159128.14 TPM= 158.47 Transcript Type= protein_coding chr21 33432487 33480004 33432487 33480004 - transcript323.chr21.nic@TMEM50B transcript323.chr21.nic protein_coding 33479838,33468787,33467010,33465342,33460413,33455727,33448782,33447018,33439214,33436883,33432487 33480004,33468926,33467122,33465409,33460505,33455784,33450863,33447140,33439297,33436992,33432802 Gene ID= ENSG00000142188.16 TPM= 23.32 Transcript Type= NA chr21 33432485 33479943 33432485 33479943 - ENST00000420455.5@TMEM50B ENST00000420455.5 protein_coding 33479838,33468787,33467010,33465342,33460413,33455727,33448782,33439214,33432485 33479943,33468926,33467122,33465409,33460505,33455784,33450863,33439297,33432802 Gene ID= ENSG00000142188.16 TPM= 24.22 Transcript Type= nonsense_mediated_decay chr21 33449135 33480011 33449135 33480011 - ENST00000542230.6@TMEM50B ENST00000542230.6 protein_coding 33479838,33468787,33467010,33465342,33460413,33455727,33449135 33480011,33468926,33467122,33465409,33460505,33455784,33450863 Gene ID= ENSG00000142188.16 TPM= 40.52 Transcript Type= protein_coding chr21 33498519 33542151 33498519 33542151 - transcript343.chr21.nnic@GART transcript343.chr21.nnic protein_coding 33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33504153,33498519 33542151,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315,33499097 Gene ID= ENSG00000159131.16 TPM= 1.81 Transcript Type= NA chr21 33502761 33542861 33502761 33542861 - transcript346.chr21.nnic@GART transcript346.chr21.nnic protein_coding 33542548,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33502761 33542861,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315 Gene ID= ENSG00000159131.16 TPM= 11.77 Transcript Type= NA chr21 33503931 33542138 33503931 33542138 - ENST00000381815.8@GART ENST00000381815.8 protein_coding 33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503931 33542138,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315 Gene ID= ENSG00000159131.16 TPM= 27.17 Transcript Type= protein_coding chr21 33503931 33542861 33503931 33542861 - ENST00000381839.7@GART ENST00000381839.7 protein_coding 33542660,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524769,33522188,33520906,33520364,33517357,33516989,33511252,33509783,33505974,33505561,33504412,33503931 33542861,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000,33522282,33521015,33520562,33517608,33517141,33511458,33509920,33506104,33505702,33504527,33504315 Gene ID= ENSG00000159131.16 TPM= 2.72 Transcript Type= protein_coding chr21 33524009 33542114 33524009 33542114 - ENST00000361093.9@GART ENST00000361093.9 protein_coding 33542065,33539171,33535225,33534579,33532345,33531489,33530759,33528850,33528519,33528167,33524009 33542114,33539356,33535320,33534753,33532456,33531557,33530884,33528937,33528604,33528335,33525000 Gene ID= ENSG00000159131.16 TPM= 22.64 Transcript Type= protein_coding chr21 33543041 33577478 33543041 33577478 + transcript357.chr21.nic@SON transcript357.chr21.nic protein_coding 33543041,33546213,33549476,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576418 33543169,33546379,33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577478 Gene ID= ENSG00000159140.19 TPM= 40.3 Transcript Type= NA chr21 33543052 33577481 33543052 33577481 + ENST00000381692.6@SON ENST00000381692.6 protein_coding 33543052,33546213,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576365 33543169,33546379,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481 Gene ID= ENSG00000159140.19 TPM= 5.43 Transcript Type= protein_coding chr21 33552248 33577481 33552248 33577481 + ENST00000436227.5@SON ENST00000436227.5 protein_coding 33552248,33557156,33559230,33559587,33567157,33568971,33573308,33575596,33575778,33576418 33555391,33557316,33559376,33559775,33567267,33569087,33573455,33575667,33575893,33577481 Gene ID= ENSG00000159140.19 TPM= 5.89 Transcript Type= protein_coding chr21 33577905 33588708 33577905 33588708 - ENST00000303071.9@DONSON ENST00000303071.9 protein_coding 33588321,33587522,33585978,33584590,33583488,33582165,33581951,33581302,33579350,33577905 33588708,33587602,33586181,33584768,33583666,33582246,33582055,33581500,33579562,33578444 Gene ID= ENSG00000159147.17 TPM= 4.53 Transcript Type= protein_coding chr21 33594662 33641762 33594662 33641762 - transcript358.chr21.nic@CRYZL1 transcript358.chr21.nic protein_coding 33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33594662 33641762,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33595614 Gene ID= ENSG00000205758.11 TPM= 1.81 Transcript Type= NA chr21 33594662 33641762 33594662 33641762 - transcript363.chr21.nic@CRYZL1 transcript363.chr21.nic protein_coding 33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33595731,33594662 33641762,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33595836,33595614 Gene ID= ENSG00000205758.11 TPM= 1.81 Transcript Type= NA chr21 33595955 33641762 33595955 33641762 - transcript366.chr21.nnic@CRYZL1 transcript366.chr21.nnic protein_coding 33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595955 33641762,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33596213 Gene ID= ENSG00000205758.11 TPM= 1.81 Transcript Type= NA chr21 33589341 33641760 33589341 33641760 - ENST00000381554.7@CRYZL1 ENST00000381554.7 protein_coding 33641681,33631486,33624683,33621996,33616706,33613538,33603404,33602234,33599150,33597280,33595731,33591162,33589341 33641760,33631557,33624760,33622068,33616750,33613606,33603537,33602345,33599248,33597401,33595836,33591207,33589921 Gene ID= ENSG00000205758.11 TPM= 16.3 Transcript Type= protein_coding chr21 33616287 33641722 33616287 33641722 - ENST00000413017.2@CRYZL1 ENST00000413017.2 protein_coding 33641681,33631486,33624683,33621996,33616706,33616287 33641722,33631557,33624760,33622068,33616750,33616603 Gene ID= ENSG00000205758.11 TPM= 1.81 Transcript Type= protein_coding chr21 33642494 33817733 33642494 33817733 + transcript382.chr21.nic@ITSN1 transcript382.chr21.nic protein_coding 33642494,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341,33797379,33799808,33810975,33813913,33817231 33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794468,33797608,33799929,33811222,33814072,33817733 Gene ID= ENSG00000205726.14 TPM= 2.72 Transcript Type= NA chr21 33642498 33838496 33642498 33838496 + ENST00000399349.5@ITSN1 ENST00000399349.5 protein_coding 33642498,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341,33797379,33799808,33810975,33813913,33818267,33819241,33829624,33834307,33836441,33836987 33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794468,33797608,33799929,33811222,33814072,33818472,33819323,33829745,33834424,33836632,33838496 Gene ID= ENSG00000205726.14 TPM= 9.96 Transcript Type= protein_coding chr21 33642496 33838498 33642496 33838498 + ENST00000399352.5@ITSN1 ENST00000399352.5 protein_coding 33642496,33718797,33721178,33722588,33735044,33750143,33751810,33755297,33761923,33765875,33767713,33772061,33774729,33774968,33781461,33781994,33794341,33797379,33799808,33810975,33813913,33818267,33819241,33823487,33826818,33829624,33834307,33836441,33836987 33642713,33718856,33721270,33722651,33735204,33750322,33751906,33755397,33761986,33766012,33767828,33772323,33774878,33775108,33781548,33782133,33794468,33797608,33799929,33811222,33814072,33818472,33819323,33823653,33826863,33829745,33834424,33836632,33838498 Gene ID= ENSG00000205726.14 TPM= 9.96 Transcript Type= protein_coding chr21 33903453 33915980 33903453 33915980 - ENST00000290299.6@ATP5O ENST00000290299.6 protein_coding 33915728,33914450,33912289,33909082,33907341,33903935,33903453 33915980,33914500,33912399,33909211,33907453,33904021,33903639 Gene ID= ENSG00000241837.6 TPM= 148.51 Transcript Type= protein_coding chr21 34073576 34143035 34073576 34143035 + transcript391.chr21.nnic@MRPS6 transcript391.chr21.nnic protein_coding 34073576,34094863,34125341,34142408 34073745,34097283,34125480,34143035 Gene ID= ENSG00000243927.5 TPM= 8.15 Transcript Type= NA chr21 34072906 34143035 34072906 34143035 + transcript395.chr21.nnic@MRPS6 transcript395.chr21.nnic protein_coding 34072906,34125341,34142408 34073268,34125480,34143035 Gene ID= ENSG00000243927.5 TPM= 7.7 Transcript Type= NA chr21 34073523 34143034 34073523 34143034 + ENST00000399312.2@MRPS6 ENST00000399312.2 protein_coding 34073523,34125341,34142408 34073745,34125480,34143034 Gene ID= ENSG00000243927.5 TPM= 167.07 Transcript Type= protein_coding chr21 34073570 34106262 34073570 34106262 + ENST00000381151.4@SLC5A3 ENST00000381151.4 protein_coding 34073570,34094863 34073745,34106262 Gene ID= ENSG00000198743.6 TPM= 6.34 Transcript Type= protein_coding chr21 34375500 34389154 34375500 34389154 + ENST00000399292.7@SMIM11A ENST00000399292.7 protein_coding 34375500,34379428,34385478,34388629 34375567,34379516,34385644,34389154 Gene ID= ENSG00000205670.10 TPM= 10.87 Transcript Type= protein_coding chr21 34516484 34526963 34516484 34526963 - ENST00000381132.6@RCAN1 ENST00000381132.6 protein_coding 34526663,34523537,34521499,34516484 34526963,34523710,34521658,34518256 Gene ID= ENSG00000159200.17 TPM= 94.63 Transcript Type= protein_coding chr21 34516484 34615142 34516484 34615142 - ENST00000313806.8@RCAN1 ENST00000313806.8 protein_coding 34614760,34523537,34521499,34516484 34615142,34523710,34521658,34518256 Gene ID= ENSG00000159200.17 TPM= 46.64 Transcript Type= protein_coding chr21 36034542 36060551 36034542 36060551 - transcript418.chr21.nnic@SETD4 transcript418.chr21.nnic protein_coding 36060347,36058816,36057109,36053583,36048308,36045582,36043782,36043401,36041807,36040575,36038150,36036518,36036085,36034542 36060551,36058924,36057204,36053620,36048396,36046011,36043956,36043651,36041888,36040655,36038273,36036680,36036251,36035960 Gene ID= ENSG00000185917.13 TPM= 1.81 Transcript Type= NA chr21 36034542 36060551 36034542 36060551 - transcript422.chr21.nic@SETD4 transcript422.chr21.nic protein_coding 36060347,36058816,36057384,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034542 36060551,36058924,36057477,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960 Gene ID= ENSG00000185917.13 TPM= 2.26 Transcript Type= NA chr21 36034541 36060550 36034541 36060550 - ENST00000332131.8@SETD4 ENST00000332131.8 protein_coding 36060347,36058816,36057109,36053583,36048308,36045582,36043782,36041807,36040575,36038150,36036085,36034541 36060550,36058924,36057204,36053620,36048396,36046011,36043956,36041888,36040655,36038273,36036251,36035960 Gene ID= ENSG00000185917.13 TPM= 1.36 Transcript Type= protein_coding chr21 36034542 36060551 36034542 36060551 - transcript427.chr21.nnic@SETD4 transcript427.chr21.nnic protein_coding 36060347,36058816,36057109,36053583,36048308,36045582,36043782,36043401,36041807,36040575,36038150,36034542 36060551,36058924,36057204,36053620,36048396,36046011,36043956,36043651,36041888,36040655,36038273,36036251 Gene ID= ENSG00000185917.13 TPM= 1.81 Transcript Type= NA chr21 36043686 36060551 36043686 36060551 - transcript428.chr21.nic@SETD4 transcript428.chr21.nic protein_coding 36060347,36058816,36057384,36057109,36053583,36048308,36045582,36043686 36060551,36058924,36057477,36057204,36053620,36048396,36046011,36043956 Gene ID= ENSG00000185917.13 TPM= 2.72 Transcript Type= NA chr21 36043686 36060551 36043686 36060551 - transcript430.chr21.nic@SETD4 transcript430.chr21.nic protein_coding 36060347,36058816,36057109,36053583,36048308,36045582,36043686 36060551,36058924,36057204,36053620,36048396,36046011,36043956 Gene ID= ENSG00000185917.13 TPM= 1.81 Transcript Type= NA chr21 36069941 36073166 36069941 36073166 + ENST00000290349.10@CBR1 ENST00000290349.10 protein_coding 36069941,36070950,36072446 36070404,36071057,36073166 Gene ID= ENSG00000159228.12 TPM= 275.29 Transcript Type= protein_coding chr21 36320231 36376646 36320231 36376646 + ENST00000487909.5@MORC3 ENST00000487909.5 protein_coding 36320231,36336874,36337732,36338774,36341399,36344579,36344912,36349311,36356620,36359955,36360184,36362183,36364093,36368988,36372374,36375143 36320303,36337006,36337946,36338921,36341546,36344707,36345031,36349408,36356724,36360077,36360258,36362228,36364259,36369876,36372531,36376646 Gene ID= ENSG00000159256.12 TPM= 2.72 Transcript Type= processed_transcript chr21 36320189 36376646 36320189 36376646 + ENST00000400485.5@MORC3 ENST00000400485.5 protein_coding 36320189,36333646,36336874,36337732,36338774,36341399,36344579,36344912,36349311,36356620,36359955,36360184,36362183,36364093,36368988,36372374,36375143 36320303,36333718,36337006,36337946,36338921,36341546,36344707,36345031,36349408,36356724,36360077,36360258,36362228,36364259,36369876,36372531,36376646 Gene ID= ENSG00000159256.12 TPM= 3.62 Transcript Type= protein_coding chr21 36750888 36990236 36750888 36990236 - ENST00000336648.8@HLCS ENST00000336648.8 protein_coding 36990158,36962036,36946009,36938832,36936449,36930251,36896860,36767218,36765012,36759727,36756542,36750888 36990236,36962170,36946154,36938994,36937392,36930433,36897131,36767285,36765172,36759841,36756755,36754417 Gene ID= ENSG00000159267.14 TPM= 3.17 Transcript Type= protein_coding chr21 36751192 36966724 36751192 36966724 - transcript450.chr21.nic@HLCS transcript450.chr21.nic protein_coding 36966444,36962036,36938832,36936449,36930251,36896860,36767218,36765012,36759727,36756542,36751192 36966724,36962170,36938994,36937392,36930433,36897131,36767285,36765172,36759841,36756755,36754417 Gene ID= ENSG00000159267.14 TPM= 11.32 Transcript Type= NA chr21 37065375 37073200 37065375 37073200 - transcript463.chr21.nnic@PIGP transcript463.chr21.nnic protein_coding 37073061,37072434,37069552,37067262,37065375 37073200,37072537,37069624,37067380,37065712 Gene ID= ENSG00000185808.13 TPM= 1.81 Transcript Type= NA chr21 37062846 37072811 37062846 37072811 - ENST00000464265.5@PIGP ENST00000464265.5 protein_coding 37072434,37069552,37067262,37062846 37072811,37069624,37067380,37065712 Gene ID= ENSG00000185808.13 TPM= 3.62 Transcript Type= protein_coding chr21 37073274 37203105 37073274 37203105 + transcript467.chr21.nic@TTC3 transcript467.chr21.nic protein_coding 37073274,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774,37185706,37187049,37188495,37191334,37192112,37195675,37197570,37197882,37200232,37201440 37073473,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182913,37185774,37187145,37188595,37191424,37192213,37196036,37197696,37198025,37200324,37203105 Gene ID= ENSG00000182670.13 TPM= 8.9 Transcript Type= NA chr21 37073268 37203105 37073268 37203105 + transcript468.chr21.nic@TTC3 transcript468.chr21.nic protein_coding 37073268,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774,37185706,37187049,37188495,37191334,37192112,37195675,37197570,37197882,37200232,37201440 37073364,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182913,37185774,37187145,37188595,37191424,37192213,37196036,37197696,37198025,37200324,37203105 Gene ID= ENSG00000182670.13 TPM= 9.35 Transcript Type= NA chr21 37073283 37186183 37073283 37186183 + transcript472.chr21.nic@TTC3 transcript472.chr21.nic protein_coding 37073283,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774,37185706 37073473,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182913,37186183 Gene ID= ENSG00000182670.13 TPM= 2.72 Transcript Type= NA chr21 37073271 37203103 37073271 37203103 + ENST00000355666.5@TTC3 ENST00000355666.5 protein_coding 37073271,37087247,37087833,37088196,37088799,37090233,37091293,37094005,37095350,37096581,37108392,37121817,37122983,37124619,37126080,37129003,37132682,37135380,37138634,37140561,37144525,37147481,37148546,37150078,37150820,37151893,37152951,37156655,37159699,37160802,37161990,37164051,37165550,37167555,37172595,37182774,37185706,37187049,37188495,37191334,37192112,37195675,37197570,37197882,37200232,37201440 37073364,37087401,37087875,37088346,37088886,37090286,37091413,37094090,37095444,37096643,37108446,37121979,37123028,37124742,37126143,37129063,37132766,37135514,37138714,37140673,37144645,37147603,37148647,37150170,37150884,37152029,37153277,37156906,37159745,37160858,37162063,37164215,37166615,37167620,37172744,37182913,37185774,37187145,37188595,37191424,37192213,37196036,37197696,37198025,37200324,37203103 Gene ID= ENSG00000182670.13 TPM= 6.18 Transcript Type= protein_coding chr21 37223420 37267532 37223420 37267532 - ENST00000309117.10@DSCR3 ENST00000309117.10 protein_coding 37267238,37240496,37238460,37233362,37232377,37228223,37227654,37223420 37267532,37240639,37238609,37233442,37232451,37228373,37227806,37225626 Gene ID= ENSG00000157538.13 TPM= 64.29 Transcript Type= protein_coding chr21 37261082 37267340 37261082 37267340 - ENST00000498789.1@DSCR3 ENST00000498789.1 protein_coding 37267238,37261082 37267340,37261937 Gene ID= ENSG00000157538.13 TPM= 2.72 Transcript Type= processed_transcript chr21 37366816 37512947 37366816 37512947 + transcript484.chr21.nnic@DYRK1A transcript484.chr21.nnic protein_coding 37366816,37420297,37421772,37472684,37478206,37480638,37486467,37490175,37493017,37496116,37505281,37506099,37511911 37367628,37420382,37421866,37472880,37478300,37480826,37486614,37490461,37493163,37496258,37505591,37506223,37512947 Gene ID= ENSG00000157540.19 TPM= 2.72 Transcript Type= NA chr21 37366816 37512947 37366816 37512947 + transcript486.chr21.nnic@DYRK1A transcript486.chr21.nnic protein_coding 37366816,37420297,37472684,37478206,37480638,37486467,37490175,37493017,37496116,37505281,37506099,37511911 37367628,37420384,37472880,37478300,37480826,37486614,37490461,37493163,37496258,37505591,37506223,37512947 Gene ID= ENSG00000157540.19 TPM= 2.72 Transcript Type= NA chr21 39174769 39183851 39174769 39183851 - ENST00000331573.7@PSMG1 ENST00000331573.7 protein_coding 39183252,39181772,39180285,39179924,39178449,39177435,39174769 39183851,39181878,39180436,39179986,39178647,39177571,39175664 Gene ID= ENSG00000183527.11 TPM= 13.58 Transcript Type= protein_coding chr21 39296437 39313642 39296437 39313642 - ENST00000341322.4@BRWD1 ENST00000341322.4 protein_coding 39313443,39313241,39313072,39312841,39296437 39313642,39313299,39313101,39312900,39298582 Gene ID= ENSG00000185658.13 TPM= 32.6 Transcript Type= protein_coding chr21 39342315 39349200 39342315 39349200 - ENST00000380749.9@HMGN1 ENST00000380749.9 protein_coding 39348903,39348545,39348422,39348292,39345146,39342315 39349200,39348577,39348451,39348339,39345274,39343159 Gene ID= ENSG00000205581.10 TPM= 125.19 Transcript Type= protein_coding chr21 39342315 39349099 39342315 39349099 - ENST00000486741.5@HMGN1 ENST00000486741.5 protein_coding 39348903,39348545,39348422,39345146,39342315 39349099,39348577,39348451,39348339,39343159 Gene ID= ENSG00000205581.10 TPM= 2.64 Transcript Type= retained_intron chr21 39380244 39397889 39380244 39397889 + ENST00000333781.9@WRB ENST00000333781.9 protein_coding 39380244,39390698,39391769,39393166,39396866 39380486,39390863,39391836,39393280,39397889 Gene ID= ENSG00000182093.14 TPM= 71.54 Transcript Type= protein_coding chr21 39387765 39397889 39387765 39397889 + ENST00000380708.5@WRB ENST00000380708.5 protein_coding 39387765,39390698,39391769,39393166,39396866 39387855,39390863,39391836,39393280,39397889 Gene ID= ENSG00000182093.14 TPM= 14.49 Transcript Type= protein_coding chr21 39380289 39515499 39380289 39515499 + transcript511.chr21.nnic@SH3BGR transcript511.chr21.nnic protein_coding 39380289,39390698,39391769,39462375,39475135,39499823,39508998,39511680,39515088 39380486,39390863,39391836,39462560,39475215,39499915,39509027,39511809,39515499 Gene ID= ENSG00000185437.13 TPM= 4.53 Transcript Type= NA chr21 39475020 39515499 39475020 39515499 + transcript525.chr21.nic@SH3BGR transcript525.chr21.nic protein_coding 39475020,39499823,39508998,39511680,39515088 39475215,39499915,39509027,39511809,39515499 Gene ID= ENSG00000185437.13 TPM= 6.04 Transcript Type= NA chr21 39445855 39515506 39445855 39515506 + ENST00000380637.7@SH3BGR ENST00000380637.7 protein_coding 39445855,39462375,39475135,39499823,39508998,39511680,39515088 39445929,39462560,39475215,39499915,39509027,39511809,39515506 Gene ID= ENSG00000185437.13 TPM= 2.42 Transcript Type= protein_coding chr21 39421894 39445788 39421894 39445788 - transcript529.chr21.nnic@LCA5L transcript529.chr21.nnic protein_coding 39445725,39429131,39421894 39445788,39429211,39423490 Gene ID= ENSG00000157578.13 TPM= 1.81 Transcript Type= NA chr21 39788628 39802087 39788628 39802087 + transcript530.chr21.nnic@IGSF5 transcript530.chr21.nnic protein_coding 39788628,39792008,39793534,39801262 39788733,39792099,39793613,39802087 Gene ID= ENSG00000183067.5 TPM= 1.81 Transcript Type= NA chr21 39867317 39929397 39867317 39929397 + ENST00000328619.9@PCP4 ENST00000328619.9 protein_coding 39867317,39898476,39928984 39867510,39898527,39929397 Gene ID= ENSG00000183036.10 TPM= 9.06 Transcript Type= protein_coding chr21 41167801 41276597 41167801 41276597 + ENST00000330333.10@BACE2 ENST00000330333.10 protein_coding 41167801,41226266,41237513,41241819,41243376,41245962,41250752,41257158,41275371 41168575,41226354,41237729,41241947,41243510,41246063,41250901,41257326,41276597 Gene ID= ENSG00000182240.15 TPM= 22.64 Transcript Type= protein_coding chr21 41420609 41459213 41420609 41459213 + transcript536.chr21.nic@MX1 transcript536.chr21.nic protein_coding 41420609,41421838,41421975,41422756,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528 41420817,41421871,41422095,41422911,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213 Gene ID= ENSG00000157601.13 TPM= 3.08 Transcript Type= NA chr21 41420001 41459213 41420001 41459213 + transcript537.chr21.nnic@MX1 transcript537.chr21.nnic protein_coding 41420001,41421975,41422756,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528 41420082,41422095,41422911,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213 Gene ID= ENSG00000157601.13 TPM= 3.08 Transcript Type= NA chr21 41426091 41459213 41426091 41459213 + transcript540.chr21.nic@MX1 transcript540.chr21.nic protein_coding 41426091,41427206,41427755,41430533,41432031,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528 41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213 Gene ID= ENSG00000157601.13 TPM= 3.17 Transcript Type= NA chr21 41426124 41459213 41426124 41459213 + transcript543.chr21.nic@MX1 transcript543.chr21.nic protein_coding 41426124,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528 41426263,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459213 Gene ID= ENSG00000157601.13 TPM= 5.34 Transcript Type= NA chr21 41420212 41423487 41420212 41423487 + transcript545.chr21.nic@MX1 transcript545.chr21.nic protein_coding 41420212,41421838,41421975,41422756 41420817,41421871,41422095,41423487 Gene ID= ENSG00000157601.13 TPM= 3.62 Transcript Type= NA chr21 41420515 41459214 41420515 41459214 + ENST00000398600.6@MX1 ENST00000398600.6 protein_coding 41420515,41421838,41422756,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528 41420817,41422095,41422911,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459214 Gene ID= ENSG00000157601.13 TPM= 3.08 Transcript Type= protein_coding chr21 41426167 41459214 41426167 41459214 + ENST00000398598.7@MX1 ENST00000398598.7 protein_coding 41426167,41427206,41427755,41430533,41432050,41435837,41437015,41439694,41440887,41441716,41443788,41445448,41446000,41449137,41451167,41452621,41458528 41426263,41427304,41427866,41430608,41432175,41436029,41437152,41439848,41441025,41441914,41443866,41445570,41446141,41449295,41451243,41452869,41459214 Gene ID= ENSG00000157601.13 TPM= 14.85 Transcript Type= protein_coding chr21 41885107 41954021 41885107 41954021 - transcript552.chr21.nnic@C2CD2 transcript552.chr21.nnic protein_coding 41953370,41952848,41942147,41921972,41918856,41918105,41914598,41912332,41909459,41907660,41906992,41905724,41901622,41899053,41885107 41954021,41953151,41942245,41922085,41918960,41918227,41914721,41912440,41909523,41907784,41907166,41905837,41901749,41899362,41889344 Gene ID= ENSG00000157617.16 TPM= 22.8 Transcript Type= NA chr21 41909578 41954027 41909578 41954027 - transcript570.chr21.nic@C2CD2 transcript570.chr21.nic protein_coding 41953370,41942147,41921972,41918856,41918105,41914598,41909578 41954027,41942245,41922085,41918960,41918227,41914721,41912440 Gene ID= ENSG00000157617.16 TPM= 37.58 Transcript Type= NA chr21 41885112 41953890 41885112 41953890 - ENST00000380486.3@C2CD2 ENST00000380486.3 protein_coding 41953370,41942147,41921972,41918856,41918105,41914598,41912332,41909459,41907660,41906992,41905724,41901622,41899053,41885112 41953890,41942245,41922085,41918960,41918227,41914721,41912440,41909523,41907784,41907166,41905837,41901749,41899362,41889344 Gene ID= ENSG00000157617.16 TPM= 33.22 Transcript Type= protein_coding chr21 41988644 42010357 41988644 42010357 - transcript580.chr21.nic@ZBTB21 transcript580.chr21.nic protein_coding 42010252,41992493,41988644 42010357,41994108,41991889 Gene ID= ENSG00000173276.13 TPM= 4.53 Transcript Type= NA chr21 41986831 42010357 41986831 42010357 - ENST00000310826.9@ZBTB21 ENST00000310826.9 protein_coding 42010252,42002897,41986831 42010357,42002961,41994108 Gene ID= ENSG00000173276.13 TPM= 3.62 Transcript Type= protein_coding chr21 42219118 42297244 42219118 42297244 + ENST00000398449.7@ABCG1 ENST00000398449.7 protein_coding 42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164 42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288037,42288312,42290218,42291192,42291656,42294660,42297244 Gene ID= ENSG00000160179.18 TPM= 164.69 Transcript Type= protein_coding chr21 42219118 42297244 42219118 42297244 + ENST00000361802.6@ABCG1 ENST00000361802.6 protein_coding 42219118,42225671,42271070,42273303,42276895,42282274,42284560,42285880,42287889,42288211,42290050,42291092,42291498,42294542,42296164 42219304,42225914,42271187,42273435,42276945,42282419,42284683,42285994,42288073,42288312,42290218,42291192,42291656,42294660,42297244 Gene ID= ENSG00000160179.18 TPM= 87.72 Transcript Type= protein_coding chr21 42311667 42315651 42311667 42315651 - ENST00000518498.1@TFF3 ENST00000518498.1 protein_coding 42315293,42313485,42311667 42315651,42313631,42312269 Gene ID= ENSG00000160180.15 TPM= 11.77 Transcript Type= protein_coding chr21 42513883 42581421 42513883 42581421 + transcript615.chr21.nic@SLC37A1 transcript615.chr21.nic protein_coding 42513883,42514631,42514870,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345 42513924,42514717,42514935,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581421 Gene ID= ENSG00000160190.13 TPM= 2.17 Transcript Type= NA chr21 42513687 42581420 42513687 42581420 + transcript616.chr21.nic@SLC37A1 transcript616.chr21.nic protein_coding 42513687,42514870,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345 42514717,42514935,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581420 Gene ID= ENSG00000160190.13 TPM= 3.08 Transcript Type= NA chr21 42513699 42581490 42513699 42581490 + transcript617.chr21.nic@SLC37A1 transcript617.chr21.nic protein_coding 42513699,42514631,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345 42513924,42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581490 Gene ID= ENSG00000160190.13 TPM= 7.61 Transcript Type= NA chr21 42513604 42581438 42513604 42581438 + transcript620.chr21.nnic@SLC37A1 transcript620.chr21.nnic protein_coding 42513604,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345 42513924,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581438 Gene ID= ENSG00000160190.13 TPM= 16.66 Transcript Type= NA chr21 42513914 42581440 42513914 42581440 + ENST00000352133.2@SLC37A1 ENST00000352133.2 protein_coding 42513914,42518277,42525776,42534698,42535472,42539512,42542404,42543436,42547103,42554062,42558958,42562078,42563815,42564708,42565827,42566985,42568360,42574818,42579736,42580345 42514717,42518510,42525857,42534830,42535550,42539647,42542480,42543602,42547140,42554142,42559089,42562168,42563877,42564793,42565875,42567058,42568438,42574915,42579800,42581440 Gene ID= ENSG00000160190.13 TPM= 10.32 Transcript Type= protein_coding chr21 42653755 42775509 42653755 42775509 + ENST00000291539.10@PDE9A ENST00000291539.10 protein_coding 42653755,42686192,42687917,42698968,42731770,42732070,42733356,42743776,42751116,42753990,42758999,42760328,42760825,42762083,42765381,42768188,42769027,42770703,42772439,42775280 42653883,42686262,42687994,42699011,42731949,42732124,42733426,42743860,42751197,42754064,42759085,42760432,42760907,42762239,42765494,42768292,42769155,42770798,42772520,42775509 Gene ID= ENSG00000160191.17 TPM= 5.43 Transcript Type= protein_coding chr21 42847659 42879569 42847659 42879569 - transcript642.chr21.nic@WDR4 transcript642.chr21.nic protein_coding 42879407,42876702,42873603,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42847659 42879569,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242 Gene ID= ENSG00000160193.11 TPM= 4.53 Transcript Type= NA chr21 42843094 42879531 42843094 42879531 - ENST00000330317.6@WDR4 ENST00000330317.6 protein_coding 42879407,42876702,42873551,42863440,42862282,42859662,42855682,42854562,42853569,42852255,42850041,42843094 42879531,42876767,42873691,42863596,42862394,42859722,42855780,42854626,42853752,42852324,42850242,42843281 Gene ID= ENSG00000160193.11 TPM= 3.62 Transcript Type= protein_coding chr21 42893301 42909101 42893301 42909101 + transcript649.chr21.nic@NDUFV3 transcript649.chr21.nic protein_coding 42893301,42903182,42908864 42893381,42904276,42909101 Gene ID= ENSG00000160194.17 TPM= 1.81 Transcript Type= NA chr21 42893265 42909105 42893265 42909105 + ENST00000354250.6@NDUFV3 ENST00000354250.6 protein_coding 42893265,42896927,42903182,42908864 42893381,42897047,42904276,42909105 Gene ID= ENSG00000160194.17 TPM= 18.11 Transcript Type= protein_coding chr21 42974510 43033582 42974510 43033582 + ENST00000291547.9@PKNOX1 ENST00000291547.9 protein_coding 42974510,43004326,43007491,43010053,43013068,43016908,43018133,43021303,43024871,43028702,43029890 42974664,43004432,43007618,43010224,43013238,43017007,43018230,43021431,43024947,43028874,43033582 Gene ID= ENSG00000160199.14 TPM= 9.96 Transcript Type= protein_coding chr21 43053191 43075945 43053191 43075945 - ENST00000398165.7@CBS ENST00000398165.7 protein_coding 43075770,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191 43075945,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983 Gene ID= ENSG00000160200.17 TPM= 12.22 Transcript Type= protein_coding chr21 43053191 43076378 43053191 43076378 - ENST00000352178.9@CBS ENST00000352178.9 protein_coding 43076225,43073266,43071985,43068509,43066243,43065616,43065387,43065203,43063900,43062953,43062311,43060441,43059226,43058834,43058145,43056803,43053191 43076378,43073341,43072201,43068615,43066377,43065695,43065521,43065272,43063991,43063078,43062395,43060546,43059303,43058968,43058253,43056887,43053983 Gene ID= ENSG00000160200.17 TPM= 1.36 Transcript Type= protein_coding chr21 43092956 43107565 43092956 43107565 - ENST00000380276.6@U2AF1 ENST00000380276.6 protein_coding 43107451,43104315,43101366,43095694,43095438,43094655,43094471,43092956 43107565,43104402,43101432,43095743,43095536,43094788,43094563,43093249 Gene ID= ENSG00000160201.11 TPM= 22.03 Transcript Type= protein_coding chr21 43092956 43107587 43092956 43107587 - ENST00000291552.8@U2AF1 ENST00000291552.8 protein_coding 43107451,43104315,43100453,43095694,43095438,43094655,43094471,43092956 43107587,43104402,43100519,43095743,43095536,43094788,43094563,43093249 Gene ID= ENSG00000160201.11 TPM= 34.71 Transcript Type= protein_coding chr21 43092957 43107578 43092957 43107578 - ENST00000398137.5@U2AF1 ENST00000398137.5 protein_coding 43107451,43104315,43101366,43100453,43095694,43095438,43094655,43094471,43092957 43107578,43104402,43101432,43100519,43095743,43095536,43094788,43094563,43093249 Gene ID= ENSG00000160201.11 TPM= 2.11 Transcript Type= protein_coding chr21 43529192 43659493 43529192 43659493 - ENST00000291560.6@HSF2BP ENST00000291560.6 protein_coding 43659386,43658061,43656587,43644289,43633272,43630322,43613830,43592225,43529192 43659493,43658320,43656737,43644392,43633421,43630454,43613947,43592328,43529962 Gene ID= ENSG00000160207.8 TPM= 1.81 Transcript Type= protein_coding chr21 43659548 43696079 43659548 43696079 + ENST00000340648.5@RRP1B ENST00000340648.5 protein_coding 43659548,43669884,43672308,43673870,43674636,43675034,43676272,43676733,43683279,43684553,43685770,43686804,43687516,43690288,43691439,43693190 43659794,43669966,43672365,43673955,43674697,43675163,43676336,43676914,43683373,43684650,43685789,43686935,43688240,43690440,43691502,43696079 Gene ID= ENSG00000160208.12 TPM= 21.73 Transcript Type= protein_coding chr21 43719112 43762307 43719112 43762307 + ENST00000291565.8@PDXK ENST00000291565.8 protein_coding 43719112,43734069,43741667,43743724,43746079,43748995,43750500,43752518,43753583,43755698,43755951 43719381,43734123,43741771,43743807,43746125,43749080,43750545,43752629,43753719,43755764,43762307 Gene ID= ENSG00000160209.18 TPM= 147.6 Transcript Type= protein_coding chr21 43772511 43776445 43772511 43776445 - ENST00000291568.6@CSTB ENST00000291568.6 protein_coding 43776204,43774658,43772511 43776445,43774759,43774330 Gene ID= ENSG00000160213.6 TPM= 219.59 Transcript Type= protein_coding chr21 43772521 43776318 43772521 43776318 - ENST00000640406.1@CSTB ENST00000640406.1 protein_coding 43776204,43772521 43776318,43774759 Gene ID= ENSG00000160213.6 TPM= 4.98 Transcript Type= protein_coding chr21 43789537 43804102 43789537 43804102 + transcript681.chr21.nic@RRP1 transcript681.chr21.nic protein_coding 43789537,43791350,43792672,43793319,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274 43789762,43791432,43792729,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43804102 Gene ID= ENSG00000160214.12 TPM= 5.59 Transcript Type= NA chr21 43789540 43804097 43789540 43804097 + transcript683.chr21.nic@RRP1 transcript683.chr21.nic protein_coding 43789540,43791350,43792672,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274,43803512 43789762,43791432,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43802387,43804097 Gene ID= ENSG00000160214.12 TPM= 2.42 Transcript Type= NA chr21 43789547 43804102 43789547 43804102 + transcript687.chr21.nic@RRP1 transcript687.chr21.nic protein_coding 43789547,43791350,43792672,43795189,43797422,43797631,43797907,43799570,43800517,43800862,43802274 43789762,43791432,43793404,43795250,43797551,43797695,43798100,43799649,43800614,43800881,43804102 Gene ID= ENSG00000160214.12 TPM= 3.78 Transcript Type= NA chr21 43865120 43987139 43865120 43987139 + transcript691.chr21.nnic@AGPAT3 transcript691.chr21.nnic protein_coding 43865120,43903957,43959634,43967946,43969118,43970653,43971388,43978046,43980989,43982304 43865345,43904019,43959747,43968115,43969279,43970806,43971490,43978121,43981187,43987139 Gene ID= ENSG00000160216.18 TPM= 12.22 Transcript Type= NA chr21 43865186 43986536 43865186 43986536 + ENST00000291572.12@AGPAT3 ENST00000291572.12 protein_coding 43865186,43903957,43959634,43967946,43969118,43970653,43971388,43978046,43980989,43982304 43865345,43904019,43959859,43968115,43969279,43970806,43971490,43978121,43981187,43986536 Gene ID= ENSG00000160216.18 TPM= 76.52 Transcript Type= protein_coding chr21 44012311 44084497 44012311 44084497 + transcript704.chr21.nic@TRAPPC10 transcript704.chr21.nic protein_coding 44012311,44032091,44037792,44052280,44055698,44059103,44063538,44074324,44075039,44076552,44077693,44079564,44080015,44082788,44084122 44012560,44032172,44037927,44052476,44055893,44059214,44063785,44074470,44075153,44076628,44077784,44079704,44080127,44083302,44084497 Gene ID= ENSG00000160218.12 TPM= 2.72 Transcript Type= NA chr21 44012319 44060262 44012319 44060262 + ENST00000380221.7@TRAPPC10 ENST00000380221.7 protein_coding 44012319,44032091,44037792,44052280,44055698,44059103,44059465 44012560,44032172,44037927,44052476,44055893,44059214,44060262 Gene ID= ENSG00000160218.12 TPM= 1.81 Transcript Type= protein_coding chr21 44133605 44145723 44133605 44145723 + ENST00000291577.10@C21orf33 ENST00000291577.10 protein_coding 44133605,44134102,44136060,44137177,44140250,44143205,44144821 44133838,44134154,44136173,44137296,44140342,44143361,44145723 Gene ID= ENSG00000160221.16 TPM= 8.15 Transcript Type= protein_coding chr21 44133618 44141417 44133618 44141417 + ENST00000427803.6@C21orf33 ENST00000427803.6 protein_coding 44133618,44134102,44136060,44137177,44140250,44140942 44133838,44134154,44136173,44137296,44140342,44141417 Gene ID= ENSG00000160221.16 TPM= 5.43 Transcript Type= protein_coding chr21 44300051 44327376 44300051 44327376 + ENST00000349048.8@PFKL ENST00000349048.8 protein_coding 44300051,44306681,44311006,44312105,44312978,44313638,44313913,44316244,44316432,44318470,44319351,44320084,44321729,44322133,44322962,44323766,44324491,44324856,44325153,44325961,44326159,44326715 44300190,44306754,44311083,44312294,44313143,44313682,44314021,44316339,44316524,44318595,44319415,44320147,44321875,44322203,44323049,44323918,44324655,44324917,44325264,44326060,44326264,44327376 Gene ID= ENSG00000141959.16 TPM= 511.63 Transcript Type= protein_coding chr21 44328944 44339402 44328944 44339402 - ENST00000339818.8@C21orf2 ENST00000339818.8 protein_coding 44339118,44337649,44335758,44333033,44331843,44330823,44328944 44339402,44337667,44335804,44333262,44332014,44330919,44330326 Gene ID= ENSG00000160226.15 TPM= 38.94 Transcript Type= protein_coding chr21 44329891 44339402 44329891 44339402 - ENST00000325223.7@C21orf2 ENST00000325223.7 protein_coding 44339118,44337649,44335758,44333033,44331843,44330823,44329891 44339402,44337667,44335804,44333262,44332014,44330916,44330326 Gene ID= ENSG00000160226.15 TPM= 16.3 Transcript Type= protein_coding chr21 44329891 44339393 44329891 44339393 - ENST00000397956.7@C21orf2 ENST00000397956.7 protein_coding 44339118,44337649,44335758,44333033,44331843,44330463,44329891 44339393,44337667,44335804,44333262,44332014,44330916,44330326 Gene ID= ENSG00000160226.15 TPM= 1.81 Transcript Type= protein_coding chr21 44455486 44462196 44455486 44462196 + ENST00000291592.5@LRRC3 ENST00000291592.5 protein_coding 44455486,44456498 44455655,44462196 Gene ID= ENSG00000160233.7 TPM= 9.06 Transcript Type= protein_coding chr21 44768580 44802019 44768580 44802019 - ENST00000345496.6@UBE2G2 ENST00000345496.6 protein_coding 44801706,44788060,44787920,44777299,44773547,44768580 44802019,44788095,44787965,44777417,44773687,44771489 Gene ID= ENSG00000184787.18 TPM= 72.44 Transcript Type= protein_coding chr21 44805617 44818129 44805617 44818129 - ENST00000332859.10@SUMO3 ENST00000332859.10 protein_coding 44817948,44813976,44809047,44805617 44818129,44814104,44809118,44807040 Gene ID= ENSG00000184900.15 TPM= 111.83 Transcript Type= protein_coding chr21 44849585 44873837 44849585 44873837 - ENST00000330938.7@PTTG1IP ENST00000330938.7 protein_coding 44873502,44865395,44861163,44856193,44855210,44849585 44873837,44865447,44861271,44856364,44855256,44851627 Gene ID= ENSG00000183255.11 TPM= 704.06 Transcript Type= protein_coding chr21 44849585 44873709 44849585 44873709 - ENST00000397887.7@PTTG1IP ENST00000397887.7 protein_coding 44873502,44865395,44861163,44849585 44873709,44865447,44861271,44851627 Gene ID= ENSG00000183255.11 TPM= 6.79 Transcript Type= protein_coding chr21 44885953 44928873 44885953 44928873 - ENST00000397850.6@ITGB2 ENST00000397850.6 protein_coding 44928654,44920821,44910725,44910284,44906915,44903365,44901492,44900320,44899067,44894971,44893404,44891809,44889978,44889276,44888693,44886736,44885953 44928873,44921050,44910785,44910372,44907095,44903535,44901733,44900475,44899162,44895060,44893544,44891996,44890222,44889495,44888895,44886902,44886430 Gene ID= ENSG00000160255.17 TPM= 115.91 Transcript Type= protein_coding chr21 44940012 44976989 44940012 44976989 + ENST00000397826.7@FAM207A ENST00000397826.7 protein_coding 44940012,44943684,44960100,44967034,44973197,44976680 44940186,44943792,44960168,44967181,44973265,44976989 Gene ID= ENSG00000160256.12 TPM= 11.32 Transcript Type= protein_coding chr21 44940010 44976989 44940010 44976989 + ENST00000291634.10@FAM207A ENST00000291634.10 protein_coding 44940010,44943684,44960100,44967034,44973197,44976680 44940186,44943837,44960168,44967181,44973265,44976989 Gene ID= ENSG00000160256.12 TPM= 10.41 Transcript Type= protein_coding chr21 45070815 45074489 45070815 45074489 - transcript771.chr21.nnic@SSR4P1 transcript771.chr21.nnic transcribed_processed_pseudogene 45074018,45073790,45070815 45074489,45073984,45072323 Gene ID= ENSG00000235374.2 TPM= 1.81 Transcript Type= NA chr21 45074560 45222587 45074560 45222587 + transcript764.chr21.nic@ADARB1 transcript764.chr21.nic protein_coding 45074560,45128402,45134715,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018 45074793,45128573,45134832,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45222587 Gene ID= ENSG00000197381.15 TPM= 1.81 Transcript Type= NA chr21 45074560 45224240 45074560 45224240 + transcript766.chr21.nic@ADARB1 transcript766.chr21.nic protein_coding 45074560,45128402,45134715,45171610,45175730,45180330,45182585,45183362,45184923,45204555,45220836,45222018 45074793,45128573,45134832,45171684,45176664,45180444,45182753,45183510,45185091,45204736,45221014,45224240 Gene ID= ENSG00000197381.15 TPM= 2.72 Transcript Type= NA chr21 45074600 45226560 45074600 45226560 + ENST00000389863.8@ADARB1 ENST00000389863.8 protein_coding 45074600,45128402,45171610,45175730,45180330,45182585,45183362,45184474,45184923,45204555,45220836,45222018,45225547 45074793,45128573,45171684,45176664,45180444,45182753,45183510,45184593,45185091,45204736,45221014,45222107,45226560 Gene ID= ENSG00000197381.15 TPM= 3.62 Transcript Type= protein_coding chr21 45263929 45287922 45263929 45287922 - transcript781.chr21.nic@POFUT2 transcript781.chr21.nic protein_coding 45287741,45285678,45283383,45282349,45278103,45277233,45277017,45269839,45267590,45266022,45263929 45287922,45285928,45283527,45282459,45278169,45277773,45277142,45270019,45267713,45266227,45265635 Gene ID= ENSG00000186866.16 TPM= 4.07 Transcript Type= NA chr21 45263921 45287922 45263921 45287922 - transcript786.chr21.nic@POFUT2 transcript786.chr21.nic protein_coding 45287741,45285678,45285269,45283383,45282349,45278103,45277017,45269839,45267590,45263921 45287922,45285928,45285328,45283527,45282459,45278169,45277142,45270019,45267713,45265635 Gene ID= ENSG00000186866.16 TPM= 2.26 Transcript Type= NA chr21 45263929 45287922 45263929 45287922 - transcript790.chr21.nnic@POFUT2 transcript790.chr21.nnic protein_coding 45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45266022,45263929 45287922,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45266560,45265635 Gene ID= ENSG00000186866.16 TPM= 3.17 Transcript Type= NA chr21 45263921 45287922 45263921 45287922 - transcript791.chr21.nnic@POFUT2 transcript791.chr21.nnic protein_coding 45287741,45285678,45283352,45282349,45278103,45277017,45269839,45267590,45263921 45287922,45285928,45283527,45282398,45278169,45277142,45270019,45267713,45265635 Gene ID= ENSG00000186866.16 TPM= 2.26 Transcript Type= NA chr21 45263929 45287922 45263929 45287922 - transcript797.chr21.nic@POFUT2 transcript797.chr21.nic protein_coding 45287741,45285678,45283383,45282349,45278103,45277017,45269839,45266022,45263929 45287922,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45265635 Gene ID= ENSG00000186866.16 TPM= 2.72 Transcript Type= NA chr21 45263928 45287898 45263928 45287898 - ENST00000349485.9@POFUT2 ENST00000349485.9 protein_coding 45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45263928 45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45265635 Gene ID= ENSG00000186866.16 TPM= 52.07 Transcript Type= protein_coding chr21 45263928 45287898 45263928 45287898 - ENST00000334538.13@POFUT2 ENST00000334538.13 protein_coding 45287741,45285678,45283383,45282349,45278103,45277017,45269839,45267590,45266022,45263928 45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713,45266227,45265635 Gene ID= ENSG00000186866.16 TPM= 3.17 Transcript Type= nonsense_mediated_decay chr21 45263928 45287898 45263928 45287898 - ENST00000331343.11@POFUT2 ENST00000331343.11 protein_coding 45287741,45285678,45283383,45282349,45278103,45277017,45269839,45263928 45287898,45285928,45283527,45282459,45278169,45277142,45270019,45267713 Gene ID= ENSG00000186866.16 TPM= 2.72 Transcript Type= protein_coding chr21 45455489 45513720 45455489 45513720 + ENST00000355480.9@COL18A1 ENST00000355480.9 protein_coding 45455489,45468242,45473895,45475476,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45504416,45505134,45505358,45505838,45507561,45509356,45510064,45511111,45512188 45456176,45468786,45473981,45475535,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504054,45504556,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45513720 Gene ID= ENSG00000182871.14 TPM= 38.77 Transcript Type= protein_coding chr21 45405137 45513720 45405137 45513720 + ENST00000400337.6@COL18A1 ENST00000400337.6 protein_coding 45405137,45405379,45468242,45473895,45475476,45476351,45477411,45477750,45478327,45479902,45480070,45480467,45480700,45481963,45482795,45486861,45487447,45488418,45489486,45490275,45490836,45491225,45492535,45492687,45493163,45493501,45494545,45494862,45495358,45496500,45497050,45497599,45504011,45504416,45505134,45505358,45505838,45507561,45509356,45510064,45511111,45512188 45405241,45405473,45468786,45473981,45475535,45476480,45477487,45477965,45478353,45479964,45480156,45480520,45480858,45482025,45482821,45486992,45487509,45488444,45489521,45490346,45490871,45491314,45492564,45492713,45493225,45493575,45494571,45494915,45495432,45496568,45497092,45497661,45504054,45504556,45505278,45505431,45505966,45507593,45509601,45510261,45511226,45513720 Gene ID= ENSG00000182871.14 TPM= 584.81 Transcript Type= protein_coding chr21 45513776 45542471 45513776 45542471 - ENST00000311124.8@SLC19A1 ENST00000311124.8 protein_coding 45542368,45537771,45531389,45530770,45525817,45513776 45542471,45538008,45532148,45530971,45525958,45516140 Gene ID= ENSG00000173638.18 TPM= 19.02 Transcript Type= protein_coding chr21 45514715 45542471 45514715 45542471 - ENST00000380010.8@SLC19A1 ENST00000380010.8 protein_coding 45542368,45537771,45531389,45530770,45525817,45514715 45542471,45538008,45532148,45530971,45525958,45515152 Gene ID= ENSG00000173638.18 TPM= 5.43 Transcript Type= protein_coding chr21 45643694 45942454 45643694 45942454 + ENST00000400314.5@PCBP3 ENST00000400314.5 protein_coding 45643694,45735392,45849961,45896208,45899599,45900591,45900997,45909355,45910902,45913951,45917588,45929917,45930786,45935253,45940030,45941670 45643868,45735429,45850095,45896362,45899622,45900623,45901113,45909486,45911030,45914025,45917629,45929995,45930845,45935305,45940199,45942454 Gene ID= ENSG00000183570.16 TPM= 1.81 Transcript Type= protein_coding chr21 45981737 46005050 45981737 46005050 + ENST00000361866.7@COL6A1 ENST00000361866.7 protein_coding 45981737,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46000759,46001253,46001961,46002218,46002527,46003120,46003391 45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000367,46000767,46001386,46002070,46002401,46002710,46003149,46005050 Gene ID= ENSG00000142156.14 TPM= 331.28 Transcript Type= protein_coding chr21 45981769 46004101 45981769 46004101 + ENST00000612273.1@COL6A1 ENST00000612273.1 protein_coding 45981769,45982634,45984269,45986526,45986944,45987155,45987499,45987610,45989084,45989608,45989752,45990258,45990378,45990773,45990979,45992010,45992164,45992363,45992748,45994167,45997421,45997700,45998121,45998398,45998897,45999153,45999657,46000331,46001253,46001961,46002218,46002527,46003120,46003391 45981947,45982763,45984469,45986685,45987072,45987175,45987519,45987654,45989137,45989652,45989778,45990284,45990422,45990826,45991041,45992072,45992217,45992398,45992810,45994229,45997483,45997762,45998171,45998433,45998959,45999218,45999692,46000370,46001386,46002070,46002401,46002710,46003149,46004101 Gene ID= ENSG00000142156.14 TPM= 80.89 Transcript Type= protein_coding chr21 46098086 46132850 46098086 46132850 + transcript921.chr21.nic@COL6A2 transcript921.chr21.nic protein_coding 46098086,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196 46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46132850 Gene ID= ENSG00000142173.14 TPM= 119.53 Transcript Type= NA chr21 46098097 46132849 46098097 46132849 + ENST00000300527.8@COL6A2 ENST00000300527.8 protein_coding 46098097,46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46131954 46098173,46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46132849 Gene ID= ENSG00000142173.14 TPM= 465.9 Transcript Type= protein_coding chr21 46111450 46129808 46111450 46129808 + ENST00000397763.5@COL6A2 ENST00000397763.5 protein_coding 46111450,46111979,46112804,46114008,46115872,46116009,46116377,46116651,46116770,46117400,46117874,46118614,46119030,46119788,46120515,46121061,46121556,46122108,46122496,46122875,46124651,46124885,46125266,46125465,46125785,46126503,46129196 46111591,46112577,46112824,46114073,46115925,46116053,46116403,46116677,46116814,46117453,46117936,46118676,46119119,46119850,46120577,46121123,46121618,46122158,46122531,46122937,46124713,46124920,46125311,46125617,46126237,46126541,46129808 Gene ID= ENSG00000142173.14 TPM= 23.54 Transcript Type= protein_coding chr21 46161156 46184447 46161156 46184447 - transcript941.chr21.nnic@SPATC1L transcript941.chr21.nnic protein_coding 46184356,46182624,46168308,46161916,46161156 46184447,46182849,46168658,46162067,46161705 Gene ID= ENSG00000160284.14 TPM= 3.62 Transcript Type= NA chr21 46161156 46184459 46161156 46184459 - transcript945.chr21.nic@SPATC1L transcript945.chr21.nic protein_coding 46182624,46168308,46161916,46161156 46184459,46168658,46162067,46161705 Gene ID= ENSG00000160284.14 TPM= 16.3 Transcript Type= NA chr21 46161148 46184476 46161148 46184476 - ENST00000330205.10@SPATC1L ENST00000330205.10 protein_coding 46184356,46168308,46161916,46161148 46184476,46168658,46162067,46161705 Gene ID= ENSG00000160284.14 TPM= 37.13 Transcript Type= protein_coding chr21 46188447 46228812 46188447 46228812 - transcript951.chr21.nic@LSS transcript951.chr21.nic protein_coding 46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46191076,46188447 46228812,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235,46188821 Gene ID= ENSG00000160285.14 TPM= 9.96 Transcript Type= NA chr21 46189127 46228827 46189127 46228827 - transcript964.chr21.nnic@LSS transcript964.chr21.nnic protein_coding 46228732,46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46195676,46194491,46191881,46189127 46228827,46228599,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46195756,46194661,46191959,46191235 Gene ID= ENSG00000160285.14 TPM= 10.14 Transcript Type= NA chr21 46189124 46228824 46189124 46228824 - ENST00000457828.6@LSS ENST00000457828.6 protein_coding 46228434,46227552,46222630,46221854,46219476,46216389,46215685,46215180,46213738,46213025,46210688,46209554,46208251,46207428,46206672,46205836,46196202,46195676,46194491,46191881,46189124 46228824,46227690,46222738,46221975,46219572,46216524,46215793,46215298,46213835,46213052,46210744,46209625,46208301,46207577,46206768,46205941,46196267,46195756,46194661,46191959,46191235 Gene ID= ENSG00000160285.14 TPM= 19.8 Transcript Type= protein_coding chr21 46233048 46286267 46233048 46286267 - transcript969.chr21.nic@MCM3AP transcript969.chr21.nic protein_coding 46285699,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46233048 46286267,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426 Gene ID= ENSG00000160294.10 TPM= 17.21 Transcript Type= NA chr21 46233048 46286264 46233048 46286264 - transcript970.chr21.nic@MCM3AP transcript970.chr21.nic protein_coding 46285803,46284068,46283615,46280497,46279993,46277527,46275186,46273388,46272561,46270401,46266982,46265925,46265321,46264117,46261280,46260793,46258939,46256789,46254776,46254392,46251529,46246628,46246307,46244807,46243465,46242802,46240811,46236829,46233048 46286264,46285394,46283838,46280575,46280137,46277717,46275325,46273585,46272829,46270563,46267142,46266166,46265523,46264217,46261411,46260906,46259091,46256986,46254844,46254526,46251682,46246886,46246404,46245197,46243722,46242931,46241017,46236979,46235426 Gene ID= ENSG00000160294.10 TPM= 14.49 Transcript Type= NA chr21 46286337 46297751 46286337 46297751 + ENST00000397701.8@YBEY ENST00000397701.8 protein_coding 46286337,46286870,46291334,46296162,46297539 46286415,46287123,46291462,46296230,46297751 Gene ID= ENSG00000182362.13 TPM= 9.06 Transcript Type= protein_coding chr21 46286384 46297751 46286384 46297751 + ENST00000329319.7@YBEY ENST00000329319.7 protein_coding 46286384,46286870,46291334,46296162,46297539 46286737,46287123,46291462,46296230,46297751 Gene ID= ENSG00000182362.13 TPM= 2.72 Transcript Type= protein_coding chr21 46458891 46546307 46458891 46546307 + transcript991.chr21.nic@DIP2A transcript991.chr21.nic protein_coding 46458891,46484757,46490600,46496988,46498582,46504361,46509257,46511417,46529092,46532127,46533524,46534004,46534585,46537224,46537446,46538483,46539877,46541756,46545137,46545881 46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46534113,46534687,46537288,46537539,46538602,46539991,46541895,46545273,46546307 Gene ID= ENSG00000160305.17 TPM= 4.53 Transcript Type= NA chr21 46458899 46569708 46458899 46569708 + ENST00000400274.5@DIP2A ENST00000400274.5 protein_coding 46458899,46484757,46490600,46496988,46498582,46504361,46509257,46511429,46529092,46532127,46533524,46534004,46534585,46537224,46537446,46538483,46539877,46541756,46545137,46545881,46546915,46549771,46550543,46551634,46551824,46554169,46554575,46554822,46555982,46556939,46557585,46558223,46560722,46561748,46563858,46565713,46566560,46567370 46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46534113,46534687,46537288,46537539,46538602,46539991,46541895,46545273,46545961,46547042,46549885,46550744,46551743,46551904,46554292,46554696,46554933,46556091,46557069,46557753,46558393,46560783,46561805,46563932,46565887,46566683,46569708 Gene ID= ENSG00000160305.17 TPM= 10.87 Transcript Type= protein_coding chr21 46458950 46550110 46458950 46550110 + ENST00000457905.7@DIP2A ENST00000457905.7 protein_coding 46458950,46484757,46490600,46496988,46498582,46504361,46509257,46511417,46529092,46532127,46533524,46534004,46534585,46537224,46537446,46538483,46539877,46541756,46545137,46545881,46546915,46549771 46459222,46484828,46490719,46497107,46498833,46504489,46509376,46511614,46529183,46532237,46533647,46534113,46534687,46537288,46537539,46538602,46539991,46541895,46545273,46545961,46547042,46550110 Gene ID= ENSG00000160305.17 TPM= 1.81 Transcript Type= protein_coding chr21 46635615 46664951 46635615 46664951 + ENST00000397638.6@PRMT2 ENST00000397638.6 protein_coding 46635615,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295 46635763,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951 Gene ID= ENSG00000160310.17 TPM= 59.31 Transcript Type= protein_coding chr21 46635674 46649893 46635674 46649893 + ENST00000397628.5@PRMT2 ENST00000397628.5 protein_coding 46635674,46636896,46643535,46644306,46648458,46649575 46635763,46636990,46643639,46644488,46648619,46649893 Gene ID= ENSG00000160310.17 TPM= 17.21 Transcript Type= protein_coding chr21 46635650 46664951 46635650 46664951 + ENST00000397637.5@PRMT2 ENST00000397637.5 protein_coding 46635650,46636896,46643535,46644306,46648458,46649575,46658745,46660833,46661800,46663383,46664295 46636547,46636990,46643639,46644488,46648619,46649739,46658920,46660962,46661936,46663554,46664951 Gene ID= ENSG00000160310.17 TPM= 4.98 Transcript Type= protein_coding chr22 11873913 11974187 11873913 11974187 - transcript14.chr22.nnic@NA transcript14.chr22.nnic NA 11974015,11971940,11873913 11974187,11971998,11874241 Gene ID= novel_gene_chr22_15 TPM= 1.81 Transcript Type= NA chr22 12602347 12626719 12602347 12626719 + transcript17.chr22.nnic@AC116618.1 transcript17.chr22.nnic unprocessed_pseudogene 12602347,12604670,12615409,12620838,12624242,12625317,12626607 12602816,12604739,12615538,12620938,12624333,12625428,12626719 Gene ID= ENSG00000283023.1 TPM= 1.81 Transcript Type= NA chr22 17037234 17070672 17037234 17070672 + transcript27.chr22.nnic@CECR7 transcript27.chr22.nnic transcribed_unprocessed_pseudogene 17037234,17044873,17047324,17069998 17037344,17045000,17047426,17070672 Gene ID= ENSG00000237438.7 TPM= 1.81 Transcript Type= NA chr22 17137512 17159262 17137512 17159262 - transcript40.chr22.nic@HDHD5 transcript40.chr22.nic protein_coding 17158457,17149542,17148448,17145024,17143098,17141059,17138550,17137512 17159262,17149745,17148560,17145117,17143131,17141233,17138738,17138357 Gene ID= ENSG00000069998.12 TPM= 16.75 Transcript Type= NA chr22 17137520 17159277 17137520 17159277 - ENST00000336737.8@HDHD5 ENST00000336737.8 protein_coding 17159126,17149542,17148448,17145024,17143098,17141059,17138550,17137520 17159277,17149745,17148560,17145117,17143131,17141233,17138738,17138357 Gene ID= ENSG00000069998.12 TPM= 165.26 Transcript Type= protein_coding chr22 17178790 17219585 17178790 17219585 - ENST00000399837.6@ADA2 ENST00000399837.6 protein_coding 17219356,17209356,17207071,17203563,17191683,17189942,17188339,17182604,17181820,17178790 17219585,17209723,17207290,17203773,17191810,17190032,17188447,17182761,17182022,17181576 Gene ID= ENSG00000093072.15 TPM= 16.75 Transcript Type= protein_coding chr22 17179306 17199783 17179306 17199783 - ENST00000330232.8@ADA2 ENST00000330232.8 protein_coding 17199549,17191683,17189942,17188339,17182604,17181820,17179306 17199783,17191810,17190032,17188447,17182761,17182022,17181576 Gene ID= ENSG00000093072.15 TPM= 10.41 Transcript Type= protein_coding chr22 17569864 17590881 17569864 17590881 + transcript62.chr22.nic@SLC25A18 transcript62.chr22.nic protein_coding 17569864,17579745,17581037,17581358,17582563,17583416,17587136,17587925,17589590,17590095 17569986,17579964,17581159,17581413,17582653,17583534,17587301,17588079,17589665,17590881 Gene ID= ENSG00000182902.13 TPM= 1.81 Transcript Type= NA chr22 17592136 17628818 17592136 17628818 - ENST00000253413.9@ATP6V1E1 ENST00000253413.9 protein_coding 17628603,17619461,17613211,17612812,17601092,17600027,17598194,17594529,17592136 17628818,17619526,17613320,17612878,17601181,17600095,17598288,17594616,17592736 Gene ID= ENSG00000131100.12 TPM= 113.19 Transcript Type= protein_coding chr22 17592169 17628747 17592169 17628747 - ENST00000399796.6@ATP6V1E1 ENST00000399796.6 protein_coding 17628603,17619461,17613211,17612812,17600027,17598194,17594529,17592169 17628747,17619526,17613320,17612878,17600095,17598288,17594616,17592736 Gene ID= ENSG00000131100.12 TPM= 4.53 Transcript Type= protein_coding chr22 17638730 17730610 17638730 17730610 + transcript69.chr22.nnic@BCL2L13 transcript69.chr22.nnic protein_coding 17638730,17655662,17662899,17683214,17688986,17696141,17702243,17726677 17638886,17655832,17663013,17683321,17689142,17696210,17702386,17730610 Gene ID= ENSG00000099968.17 TPM= 14.04 Transcript Type= NA chr22 17638738 17730610 17638738 17730610 + transcript73.chr22.nnic@BCL2L13 transcript73.chr22.nnic protein_coding 17638738,17638846,17655662,17683214,17688986,17696141,17702243,17726677 17638810,17638886,17655832,17683321,17689142,17696210,17702386,17730610 Gene ID= ENSG00000099968.17 TPM= 12.22 Transcript Type= NA chr22 17638746 17729224 17638746 17729224 + transcript80.chr22.nic@BCL2L13 transcript80.chr22.nic protein_coding 17638746,17655662,17683214,17688986,17696141,17726677 17638886,17655832,17683321,17689142,17696210,17729224 Gene ID= ENSG00000099968.17 TPM= 6.64 Transcript Type= NA chr22 17638584 17730855 17638584 17730855 + ENST00000418951.6@BCL2L13 ENST00000418951.6 protein_coding 17638584,17655662,17683214,17688986,17702243,17726677 17638886,17655832,17683321,17689142,17702386,17730855 Gene ID= ENSG00000099968.17 TPM= 9.96 Transcript Type= protein_coding chr22 17638584 17730855 17638584 17730855 + ENST00000543133.5@BCL2L13 ENST00000543133.5 protein_coding 17638584,17655662,17683214,17696141,17702243,17726677 17638886,17655832,17683321,17696210,17702386,17730855 Gene ID= ENSG00000099968.17 TPM= 3.47 Transcript Type= protein_coding chr22 17638584 17730855 17638584 17730855 + ENST00000618481.4@BCL2L13 ENST00000618481.4 protein_coding 17638584,17683214,17688986,17696141,17702243,17726677 17638886,17683321,17689142,17696210,17702386,17730855 Gene ID= ENSG00000099968.17 TPM= 5.28 Transcript Type= protein_coding chr22 17734175 17774489 17734175 17774489 - ENST00000399765.5@BID ENST00000399765.5 protein_coding 17774381,17739349,17738017,17734175 17774489,17739488,17738229,17735591 Gene ID= ENSG00000015475.18 TPM= 1.81 Transcript Type= protein_coding chr22 17787649 18024559 17787649 18024559 - ENST00000441493.6@MICAL3 ENST00000441493.6 protein_coding 18024281,17906549,17904632,17902631,17901878,17900842,17899448,17896724,17896246,17895284,17893808,17891485,17889034,17887323,17887170,17885878,17871837,17865924,17864899,17841822,17831854,17827644,17822947,17822030,17821427,17817311,17816690,17810703,17808844,17791202,17790998,17787649 18024559,17906886,17904839,17902747,17901979,17900997,17899548,17896981,17896361,17895410,17893904,17891632,17889230,17887435,17887232,17886051,17872023,17866012,17864986,17842017,17832107,17827781,17823060,17822170,17821509,17819129,17816784,17810813,17808937,17791301,17791071,17790916 Gene ID= ENSG00000243156.7 TPM= 12.68 Transcript Type= protein_coding chr22 17899082 18001514 17899082 18001514 - transcript94.chr22.nic@MICAL3 transcript94.chr22.nic protein_coding 18001393,17906549,17904632,17902631,17901878,17900842,17899082 18001514,17906886,17904839,17902747,17901979,17900997,17899548 Gene ID= ENSG00000243156.7 TPM= 3.62 Transcript Type= NA chr22 18078008 18088460 18078008 18088460 + ENST00000399744.7@PEX26 ENST00000399744.7 protein_coding 18078008,18079874,18083437,18085112,18087972 18078606,18080014,18083732,18085258,18088460 Gene ID= ENSG00000215193.12 TPM= 1.81 Transcript Type= protein_coding chr22 18110687 18131154 18110687 18131154 + ENST00000316027.10@TUBA8 ENST00000316027.10 protein_coding 18110687,18121479,18124156,18126354,18130843 18110839,18121701,18124304,18127034,18131154 Gene ID= ENSG00000183785.14 TPM= 1.81 Transcript Type= protein_coding chr22 18149899 18177397 18149899 18177397 + ENST00000215794.7@USP18 ENST00000215794.7 protein_coding 18149899,18157558,18160172,18161790,18167255,18167890,18169844,18170753,18173150,18173793,18176772 18150222,18157820,18160268,18161935,18167334,18168036,18169939,18170920,18173281,18173842,18177397 Gene ID= ENSG00000184979.9 TPM= 5.43 Transcript Type= protein_coding chr22 18906223 18912088 18906223 18912088 + ENST00000331444.10@DGCR6 ENST00000331444.10 protein_coding 18906223,18906565,18910172,18910888,18911540 18906484,18906725,18910272,18911028,18912088 Gene ID= ENSG00000183628.12 TPM= 24.6 Transcript Type= protein_coding chr22 18906325 18914238 18906325 18914238 + ENST00000483718.5@DGCR6 ENST00000483718.5 protein_coding 18906325,18906565,18910172,18910888,18911540 18906467,18906725,18910272,18911028,18914238 Gene ID= ENSG00000183628.12 TPM= 1.51 Transcript Type= nonsense_mediated_decay chr22 18906351 18912082 18906351 18912082 + ENST00000427407.5@DGCR6 ENST00000427407.5 protein_coding 18906351,18906565,18909980,18910172,18910888,18911540 18906484,18906725,18910098,18910272,18911028,18912082 Gene ID= ENSG00000183628.12 TPM= 5.59 Transcript Type= nonsense_mediated_decay chr22 18970457 18994639 18970457 18994639 + transcript107.chr22.nnic@DGCR5 transcript107.chr22.nnic transcribed_unprocessed_pseudogene 18970457,18985836,18987757,18988091,18990720,18991817 18970658,18986019,18987900,18988195,18990924,18994639 Gene ID= ENSG00000237517.9 TPM= 2.42 Transcript Type= NA chr22 18970484 18994639 18970484 18994639 + transcript109.chr22.nic@DGCR5 transcript109.chr22.nic processed_transcript 18970484,18987757,18990720,18991817 18970658,18987900,18990924,18994639 Gene ID= ENSG00000283406.1 TPM= 4.23 Transcript Type= NA chr22 18970477 18994639 18970477 18994639 + transcript110.chr22.nnic@DGCR5 transcript110.chr22.nnic processed_transcript 18970477,18990720,18991817 18970658,18990924,18994639 Gene ID= ENSG00000283406.1 TPM= 6.04 Transcript Type= NA chr22 19036281 19122469 19036281 19122469 - transcript111.chr22.nnic@DGCR2 transcript111.chr22.nnic protein_coding 19122128,19089368,19068100,19064848,19063202,19056986,19052481,19048440,19041807,19041058,19036281 19122469,19089490,19068225,19065067,19063278,19057162,19052605,19048643,19041959,19041294,19039121 Gene ID= ENSG00000070413.19 TPM= 15.85 Transcript Type= NA chr22 19036282 19122454 19036282 19122454 - ENST00000537045.5@DGCR2 ENST00000537045.5 protein_coding 19122128,19068100,19064848,19063202,19056986,19048440,19041807,19041058,19036282 19122454,19068225,19065067,19063278,19057162,19048643,19041959,19041294,19039121 Gene ID= ENSG00000070413.19 TPM= 15.85 Transcript Type= protein_coding chr22 19036286 19122454 19036286 19122454 - ENST00000263196.11@DGCR2 ENST00000263196.11 protein_coding 19122128,19089368,19068100,19064848,19063202,19056986,19048440,19041807,19041058,19036286 19122454,19089490,19068225,19065067,19063278,19057162,19048643,19041959,19041294,19039121 Gene ID= ENSG00000070413.19 TPM= 118.63 Transcript Type= protein_coding chr22 19130279 19144684 19130279 19144684 - ENST00000252137.10@ESS2 ENST00000252137.10 protein_coding 19144506,19142726,19142538,19139855,19139612,19139159,19138215,19137323,19135060,19130279 19144684,19142894,19142633,19140024,19139729,19139292,19138317,19137432,19135175,19134475 Gene ID= ENSG00000100056.11 TPM= 29.88 Transcript Type= protein_coding chr22 19175575 19178830 19175575 19178830 - ENST00000215882.9@SLC25A1 ENST00000215882.9 protein_coding 19178580,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175575 19178830,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244 Gene ID= ENSG00000100075.9 TPM= 234.54 Transcript Type= protein_coding chr22 19175593 19178521 19175593 19178521 - ENST00000451283.5@SLC25A1 ENST00000451283.5 protein_coding 19178387,19178133,19177942,19177727,19177120,19176846,19176578,19176421,19175593 19178521,19178240,19178041,19177865,19177204,19176950,19176693,19176494,19176244 Gene ID= ENSG00000100075.9 TPM= 8.15 Transcript Type= protein_coding chr22 19179473 19291714 19179473 19291714 - ENST00000427926.5@CLTCL1 ENST00000427926.5 protein_coding 19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19187558,19183390,19180731,19180199,19179473 19291714,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19187728,19183611,19180806,19180238,19179969 Gene ID= ENSG00000070371.15 TPM= 6.79 Transcript Type= protein_coding chr22 19179473 19291685 19179473 19291685 - ENST00000621271.4@CLTCL1 ENST00000621271.4 protein_coding 19291600,19275623,19253959,19242775,19239275,19235696,19234509,19233422,19233166,19232476,19229838,19226219,19225453,19223891,19222684,19221951,19221377,19219885,19216111,19210326,19208922,19208154,19201329,19199734,19196489,19196266,19191304,19187981,19183390,19180731,19180199,19179473 19291685,19275830,19254227,19242936,19239388,19235869,19234706,19233622,19233318,19232598,19229975,19226383,19225633,19224054,19222809,19222093,19221611,19220007,19216256,19210509,19209114,19208311,19201493,19199841,19196656,19196415,19191435,19188091,19183611,19180806,19180238,19179969 Gene ID= ENSG00000070371.15 TPM= 1.36 Transcript Type= protein_coding chr22 19330697 19431754 19330697 19431754 - transcript143.chr22.nnic@HIRA transcript143.chr22.nnic protein_coding 19431440,19410716,19408274,19407184,19405786,19399080,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330697 19431754,19410778,19408593,19407274,19405880,19399192,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556 Gene ID= ENSG00000100084.14 TPM= 1.81 Transcript Type= NA chr22 19330697 19431754 19330697 19431754 - transcript144.chr22.nnic@HIRA transcript144.chr22.nnic protein_coding 19431440,19410716,19408274,19407184,19405786,19405463,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330697 19431754,19410778,19408593,19407274,19405880,19405531,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556 Gene ID= ENSG00000100084.14 TPM= 2.72 Transcript Type= NA chr22 19330697 19447736 19330697 19447736 - transcript146.chr22.nnic@HIRA transcript146.chr22.nnic protein_coding 19447665,19447378,19410716,19408274,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330697 19447736,19447545,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556 Gene ID= ENSG00000100084.14 TPM= 1.81 Transcript Type= NA chr22 19330697 19431754 19330697 19431754 - transcript148.chr22.nnic@HIRA transcript148.chr22.nnic protein_coding 19431440,19410716,19408274,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330697 19431754,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556 Gene ID= ENSG00000100084.14 TPM= 2.72 Transcript Type= NA chr22 19330697 19431698 19330697 19431698 - transcript149.chr22.nnic@HIRA transcript149.chr22.nnic protein_coding 19431440,19410716,19408333,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330697 19431698,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556 Gene ID= ENSG00000100084.14 TPM= 1.81 Transcript Type= NA chr22 19291864 19351554 19291864 19351554 - transcript166.chr22.nnic@HIRA transcript166.chr22.nnic protein_coding 19351044,19333702,19331554,19328398,19291864 19351554,19333743,19331682,19328573,19292330 Gene ID= ENSG00000100084.14 TPM= 1.81 Transcript Type= NA chr22 19330698 19431733 19330698 19431733 - ENST00000263208.5@HIRA ENST00000263208.5 protein_coding 19431440,19410716,19408483,19407184,19405786,19397992,19396787,19394342,19392101,19388484,19387711,19385521,19383620,19377869,19375631,19361727,19361237,19359336,19356890,19356230,19355760,19353996,19353356,19351358,19330698 19431733,19410778,19408593,19407274,19405880,19398087,19396947,19394509,19392214,19388554,19387816,19385736,19383705,19378066,19375792,19361931,19361341,19359484,19357051,19356288,19355865,19354118,19353519,19351446,19331556 Gene ID= ENSG00000100084.14 TPM= 19.02 Transcript Type= protein_coding chr22 19440894 19447736 19440894 19447736 - transcript170.chr22.nnic@C22orf39 transcript170.chr22.nnic protein_coding 19447665,19447378,19444012,19440894 19447736,19447545,19444390,19441694 Gene ID= ENSG00000242259.8 TPM= 2.72 Transcript Type= NA chr22 19443371 19447697 19443371 19447697 - ENST00000333059.5@C22orf39 ENST00000333059.5 protein_coding 19447665,19447378,19443371 19447697,19447545,19444390 Gene ID= ENSG00000242259.8 TPM= 10.87 Transcript Type= protein_coding chr22 19432579 19436067 19432579 19436067 + ENST00000443660.5@MRPL40 ENST00000443660.5 protein_coding 19432579,19433265,19434736,19435638 19432859,19433348,19434894,19436067 Gene ID= ENSG00000185608.8 TPM= 2.72 Transcript Type= processed_transcript chr22 19449910 19479215 19449910 19479215 - ENST00000263202.14@UFD1 ENST00000263202.14 protein_coding 19479083,19475470,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19449910 19479215,19475602,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744 Gene ID= ENSG00000070010.18 TPM= 41.95 Transcript Type= protein_coding chr22 19450622 19479183 19450622 19479183 - transcript161.chr22.nnic@UFD1 transcript161.chr22.nnic protein_coding 19479083,19475068,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19450622 19479183,19475100,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744 Gene ID= ENSG00000070010.18 TPM= 2.11 Transcript Type= NA chr22 19450624 19479196 19450624 19479196 - transcript163.chr22.nic@UFD1 transcript163.chr22.nic protein_coding 19479083,19471687,19467873,19465202,19458071,19456853,19456587,19455680,19454749,19450624 19479196,19471808,19468003,19465274,19458139,19456918,19456634,19455768,19454830,19450744 Gene ID= ENSG00000070010.18 TPM= 4.83 Transcript Type= NA chr22 19523052 19525423 19523052 19525423 - ENST00000413119.2@CLDN5 ENST00000413119.2 protein_coding 19525155,19523052 19525423,19524542 Gene ID= ENSG00000184113.9 TPM= 9.06 Transcript Type= protein_coding chr22 19714473 19724780 19714473 19724780 + transcript177.chr22.nic@SEPT5 transcript177.chr22.nic protein_coding 19714473,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428,19723854 19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723579,19724780 Gene ID= ENSG00000184702.18 TPM= 3.62 Transcript Type= NA chr22 19714464 19723319 19714464 19723319 + ENST00000455784.6@SEPT5 ENST00000455784.6 protein_coding 19714464,19714781,19719602,19719806,19720115,19720320,19720549,19720768,19721640,19721822,19722237,19722428 19714631,19714791,19719698,19719892,19720238,19720454,19720666,19720869,19721736,19721957,19722339,19723319 Gene ID= ENSG00000184702.18 TPM= 2.72 Transcript Type= protein_coding chr22 19783224 19854939 19783224 19854939 - ENST00000329517.10@GNB1L ENST00000329517.10 protein_coding 19854820,19854443,19821228,19820598,19812285,19806659,19802001,19783224 19854939,19854539,19821375,19820723,19812447,19806757,19802216,19788960 Gene ID= ENSG00000185838.13 TPM= 2.72 Transcript Type= protein_coding chr22 19788415 19854843 19788415 19854843 - ENST00000403325.5@GNB1L ENST00000403325.5 protein_coding 19854443,19821228,19820598,19812285,19806659,19802001,19788415 19854843,19821375,19820723,19812447,19806757,19802216,19788960 Gene ID= ENSG00000185838.13 TPM= 1.81 Transcript Type= protein_coding chr22 19846138 19854896 19846138 19854896 - ENST00000407472.5@RTL10 ENST00000407472.5 protein_coding 19854820,19854443,19846138 19854896,19854539,19852486 Gene ID= ENSG00000215012.8 TPM= 3.62 Transcript Type= protein_coding chr22 19846146 19854886 19846146 19854886 - ENST00000405640.1@RTL10 ENST00000405640.1 protein_coding 19854443,19846146 19854886,19852486 Gene ID= ENSG00000215012.8 TPM= 2.72 Transcript Type= protein_coding chr22 19875522 19941992 19875522 19941992 - ENST00000400521.6@TXNRD2 ENST00000400521.6 protein_coding 19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19877040,19875522 19941992,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234,19875807 Gene ID= ENSG00000184470.20 TPM= 172.96 Transcript Type= protein_coding chr22 19875522 19941803 19875522 19941803 - ENST00000400519.6@TXNRD2 ENST00000400519.6 protein_coding 19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19875522 19941803,19931095,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877234 Gene ID= ENSG00000184470.20 TPM= 1.81 Transcript Type= protein_coding chr22 19875519 19941807 19875519 19941807 - ENST00000474308.5@TXNRD2 ENST00000474308.5 protein_coding 19941701,19931030,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19883325,19880622,19880179,19878366,19878090,19877040,19875519 19941807,19931098,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19883461,19880717,19880271,19878437,19878187,19877212,19875807 Gene ID= ENSG00000184470.20 TPM= 1.81 Transcript Type= nonsense_mediated_decay chr22 19894258 19941804 19894258 19941804 - ENST00000334363.14@TXNRD2 ENST00000334363.14 protein_coding 19941701,19931030,19919543,19918860,19918143,19915765,19915214,19911377,19899049,19898039,19895407,19894258 19941804,19931098,19919599,19919004,19918217,19915843,19915276,19911447,19899068,19898130,19895581,19895200 Gene ID= ENSG00000184470.20 TPM= 2.72 Transcript Type= protein_coding chr22 19941607 19969975 19941607 19969975 + ENST00000361682.10@COMT ENST00000361682.10 protein_coding 19941607,19961199,19962527,19963566,19964168,19968536 19941897,19961289,19962815,19963759,19964299,19969975 Gene ID= ENSG00000093010.13 TPM= 426.29 Transcript Type= protein_coding chr22 19951503 19969016 19951503 19969016 + ENST00000406520.7@COMT ENST00000406520.7 protein_coding 19951503,19961199,19962527,19963566,19964168,19968536 19951654,19961289,19962815,19963759,19964299,19969016 Gene ID= ENSG00000093010.13 TPM= 71.76 Transcript Type= protein_coding chr22 19969867 20016858 19969867 20016858 - transcript196.chr22.nic@ARVCF transcript196.chr22.nic protein_coding 20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969867 20016858,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743 Gene ID= ENSG00000099889.13 TPM= 3.78 Transcript Type= NA chr22 19969876 19987217 19969876 19987217 - transcript206.chr22.nic@ARVCF transcript206.chr22.nic protein_coding 19987073,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19971216,19969876 19987217,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19971335,19970743 Gene ID= ENSG00000099889.13 TPM= 2.87 Transcript Type= NA chr22 19969867 19987217 19969867 19987217 - transcript213.chr22.nic@ARVCF transcript213.chr22.nic protein_coding 19987073,19981933,19981211,19979743,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969867 19987217,19982091,19981737,19980242,19979080,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743 Gene ID= ENSG00000099889.13 TPM= 17.36 Transcript Type= NA chr22 19969867 19987217 19969867 19987217 - transcript218.chr22.nic@ARVCF transcript218.chr22.nic protein_coding 19987073,19981933,19978897,19977958,19977415,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19969867 19987217,19982091,19981737,19978075,19977586,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19970743 Gene ID= ENSG00000099889.13 TPM= 4.68 Transcript Type= NA chr22 19969896 20016808 19969896 20016808 - ENST00000263207.7@ARVCF ENST00000263207.7 protein_coding 20016589,20010455,19990585,19981933,19981211,19979743,19978897,19977958,19977415,19976706,19975686,19974112,19973643,19973119,19972925,19972737,19972358,19971886,19971216,19969896 20016808,20010508,19990812,19982091,19981737,19980242,19979080,19978075,19977586,19976723,19975757,19974239,19973793,19973317,19973036,19972827,19972411,19971971,19971335,19970743 Gene ID= ENSG00000099889.13 TPM= 5.43 Transcript Type= protein_coding chr22 20021089 20067959 20021089 20067959 + transcript274.chr22.nic@TANGO2 transcript274.chr22.nic protein_coding 20021089,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542 20021134,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20067959 Gene ID= ENSG00000183597.15 TPM= 20.83 Transcript Type= NA chr22 20021103 20067959 20021103 20067959 + transcript286.chr22.nic@TANGO2 transcript286.chr22.nic protein_coding 20021103,20036760,20043355,20052465,20055943,20061530,20063338,20064542 20021246,20036854,20043443,20052584,20056013,20061683,20063442,20067959 Gene ID= ENSG00000183597.15 TPM= 12.68 Transcript Type= NA chr22 20021069 20065925 20021069 20065925 + ENST00000456048.5@TANGO2 ENST00000456048.5 protein_coding 20021069,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542 20021134,20037094,20043443,20052584,20053551,20056013,20061683,20063442,20065925 Gene ID= ENSG00000183597.15 TPM= 13.36 Transcript Type= protein_coding chr22 20021069 20065925 20021069 20065925 + ENST00000432883.5@TANGO2 ENST00000432883.5 protein_coding 20021069,20036760,20043355,20052465,20055943,20061530,20063338,20064542 20021134,20036854,20043443,20052584,20056013,20061683,20063442,20065925 Gene ID= ENSG00000183597.15 TPM= 3.4 Transcript Type= protein_coding chr22 20021108 20065926 20021108 20065926 + ENST00000327374.8@TANGO2 ENST00000327374.8 protein_coding 20021108,20036760,20043355,20052465,20053437,20055943,20061530,20063338,20064542 20021246,20036854,20043443,20052584,20053551,20056013,20061683,20063442,20065926 Gene ID= ENSG00000183597.15 TPM= 41.43 Transcript Type= protein_coding chr22 20021072 20065926 20021072 20065926 + ENST00000398042.6@TANGO2 ENST00000398042.6 protein_coding 20021072,20036760,20043355,20052465,20061530,20063338,20064542 20021134,20036854,20043443,20052584,20061683,20063442,20065926 Gene ID= ENSG00000183597.15 TPM= 4.3 Transcript Type= protein_coding chr22 20080232 20111871 20080232 20111871 + ENST00000351989.7@DGCR8 ENST00000351989.7 protein_coding 20080232,20085687,20087162,20089669,20089976,20091435,20091869,20092809,20094713,20106177,20106592,20107271,20108890,20110025 20080383,20086683,20087321,20089811,20090258,20091632,20091970,20092907,20094795,20106277,20106698,20107398,20109003,20111871 Gene ID= ENSG00000128191.15 TPM= 11.77 Transcript Type= protein_coding chr22 20111872 20117223 20111872 20117223 - transcript264.chr22.nic@TRMT2A transcript264.chr22.nic protein_coding 20116883,20116038,20115672,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111872 20117223,20116612,20115780,20115447,20114876,20114685,20113808,20113507,20113234,20113007,20112794 Gene ID= ENSG00000099899.14 TPM= 3.47 Transcript Type= NA chr22 20111871 20117247 20111871 20117247 - transcript270.chr22.nic@TRMT2A transcript270.chr22.nic protein_coding 20116883,20116038,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111871 20117247,20116612,20115780,20114876,20114685,20113808,20113507,20113234,20113007,20112794 Gene ID= ENSG00000099899.14 TPM= 15.24 Transcript Type= NA chr22 20111866 20117295 20111866 20117295 - ENST00000252136.11@TRMT2A ENST00000252136.11 protein_coding 20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20111866 20117295,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113507,20113234,20113007,20112794 Gene ID= ENSG00000099899.14 TPM= 63.54 Transcript Type= protein_coding chr22 20112338 20117222 20112338 20117222 - ENST00000439169.2@TRMT2A ENST00000439169.2 protein_coding 20116883,20116038,20115672,20115266,20114965,20114761,20114574,20113686,20113432,20113118,20112911,20112338 20117222,20116612,20115780,20115447,20115079,20114876,20114685,20113808,20113561,20113234,20113007,20112794 Gene ID= ENSG00000099899.14 TPM= 1.81 Transcript Type= protein_coding chr22 20115938 20127357 20115938 20127357 + ENST00000430524.5@RANBP1 ENST00000430524.5 protein_coding 20115938,20119013,20122264,20125308,20126303,20126952 20116430,20119149,20122421,20125436,20126368,20127357 Gene ID= ENSG00000099901.16 TPM= 2.56 Transcript Type= protein_coding chr22 20117424 20127355 20117424 20127355 + ENST00000402752.5@RANBP1 ENST00000402752.5 protein_coding 20117424,20119013,20122264,20125308,20126303,20126955 20117664,20119149,20122421,20125436,20126368,20127355 Gene ID= ENSG00000099901.16 TPM= 98.55 Transcript Type= protein_coding chr22 20117444 20127354 20117444 20127354 + transcript303.chr22.nic@RANBP1 transcript303.chr22.nic protein_coding 20117444,20119013,20122264,20125308,20126303 20117664,20119149,20122421,20125436,20127354 Gene ID= ENSG00000099901.16 TPM= 12.98 Transcript Type= NA chr22 20117548 20127181 20117548 20127181 + ENST00000331821.7@RANBP1 ENST00000331821.7 protein_coding 20117548,20119013,20122264,20125308,20126303,20126952 20117664,20119149,20122421,20125436,20126368,20127181 Gene ID= ENSG00000099901.16 TPM= 9.06 Transcript Type= protein_coding chr22 20131252 20146435 20131252 20146435 + transcript308.chr22.nic@ZDHHC8 transcript308.chr22.nic protein_coding 20131252,20139194,20139478,20139720,20140617,20140871,20141217,20141421,20142756,20145229 20132051,20139315,20139635,20140217,20140708,20141012,20141337,20141530,20143756,20146435 Gene ID= ENSG00000099904.15 TPM= 33.51 Transcript Type= NA chr22 20314276 20320080 20314276 20320080 - ENST00000248879.7@DGCR6L ENST00000248879.7 protein_coding 20319879,20319639,20316119,20315336,20314276 20320080,20319799,20316219,20315476,20314824 Gene ID= ENSG00000128185.9 TPM= 91.91 Transcript Type= protein_coding chr22 20314283 20320009 20314283 20320009 - ENST00000405465.3@DGCR6L ENST00000405465.3 protein_coding 20319879,20319639,20315336,20314283 20320009,20319786,20315476,20314824 Gene ID= ENSG00000128185.9 TPM= 5.89 Transcript Type= protein_coding chr22 20394115 20407678 20394115 20407678 + ENST00000400451.6@ZNF74 ENST00000400451.6 protein_coding 20394115,20395333,20400632,20401277,20405377 20394662,20395418,20400758,20401372,20407678 Gene ID= ENSG00000185252.18 TPM= 4.53 Transcript Type= protein_coding chr22 20441519 20495855 20441519 20495855 - transcript329.chr22.nic@KLHL22 transcript329.chr22.nic protein_coding 20495760,20488985,20471350,20464858,20457808,20446443,20441519 20495855,20489212,20471515,20465576,20458000,20446676,20442438 Gene ID= ENSG00000099910.16 TPM= 2.72 Transcript Type= NA chr22 20441519 20495883 20441519 20495883 - ENST00000328879.8@KLHL22 ENST00000328879.8 protein_coding 20495760,20488985,20471350,20464858,20457808,20446443,20441519 20495883,20489244,20471515,20465576,20458000,20446676,20442438 Gene ID= ENSG00000099910.16 TPM= 30.79 Transcript Type= protein_coding chr22 20441519 20495812 20441519 20495812 - transcript332.chr22.nic@KLHL22 transcript332.chr22.nic protein_coding 20495760,20471350,20464858,20457808,20446443,20441519 20495812,20471515,20465576,20458000,20446676,20442438 Gene ID= ENSG00000099910.16 TPM= 3.62 Transcript Type= NA chr22 20495917 20500838 20495917 20500838 + transcript335.chr22.nnic@MED15 transcript335.chr22.nnic protein_coding 20495917,20498667,20499241,20500741 20496036,20498791,20499366,20500838 Gene ID= ENSG00000099917.17 TPM= 2.72 Transcript Type= NA chr22 20507583 20587634 20507583 20587634 + transcript339.chr22.nic@MED15 transcript339.chr22.nic protein_coding 20507583,20518878,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20575113,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568 20507746,20518995,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20575232,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587634 Gene ID= ENSG00000099917.17 TPM= 7.12 Transcript Type= NA chr22 20507610 20587619 20507610 20587619 + ENST00000263205.11@MED15 ENST00000263205.11 protein_coding 20507610,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20575113,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568 20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20575232,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587619 Gene ID= ENSG00000099917.17 TPM= 70.3 Transcript Type= protein_coding chr22 20507618 20587617 20507618 20587617 + ENST00000406969.5@MED15 ENST00000406969.5 protein_coding 20507618,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568 20507735,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587617 Gene ID= ENSG00000099917.17 TPM= 5.59 Transcript Type= protein_coding chr22 20507602 20587632 20507602 20587632 + ENST00000292733.11@MED15 ENST00000292733.11 protein_coding 20507602,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568 20507746,20537204,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587632 Gene ID= ENSG00000099917.17 TPM= 40.29 Transcript Type= protein_coding chr22 20507585 20587619 20507585 20587619 + ENST00000433831.5@MED15 ENST00000433831.5 protein_coding 20507585,20537117,20551436,20553145,20554936,20564450,20566467,20568521,20582611,20582840,20583113,20583330,20584359,20584855,20585101,20585728,20586568 20507746,20537215,20551487,20553174,20555148,20564688,20566817,20568631,20582747,20582967,20583247,20583393,20584425,20585015,20585267,20585826,20587619 Gene ID= ENSG00000099917.17 TPM= 7.59 Transcript Type= nonsense_mediated_decay chr22 20707693 20858825 20707693 20858825 - transcript389.chr22.nnic@PI4KA transcript389.chr22.nnic protein_coding 20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799156,20798584,20796146,20793193,20765585,20765100,20764817,20761304,20753110,20752903,20751674,20751293,20749905,20747583,20744628,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707693 20858825,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798614,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20744720,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098 Gene ID= ENSG00000241973.10 TPM= 3.92 Transcript Type= NA chr22 20707693 20858825 20707693 20858825 - transcript392.chr22.nnic@PI4KA transcript392.chr22.nnic protein_coding 20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20761304,20753110,20752903,20751674,20751293,20749905,20747583,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707693 20858825,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098 Gene ID= ENSG00000241973.10 TPM= 4.83 Transcript Type= NA chr22 20707691 20858812 20707691 20858812 - ENST00000255882.10@PI4KA ENST00000255882.10 protein_coding 20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798584,20796146,20793193,20765585,20765100,20764817,20761304,20753110,20752903,20751674,20751293,20749905,20747583,20744628,20742608,20742228,20734395,20734043,20733736,20732971,20729892,20729632,20729313,20727774,20727230,20726488,20721298,20718693,20717708,20714628,20714458,20713281,20712693,20712486,20711341,20710699,20709908,20709296,20707691 20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687,20796314,20793243,20765693,20765236,20764950,20761386,20753180,20753027,20751755,20751376,20749994,20747702,20744720,20742764,20742355,20734553,20734194,20733843,20733098,20730011,20729711,20729506,20727864,20727397,20726541,20721418,20718822,20717778,20714700,20714528,20713390,20712797,20712611,20711461,20710858,20709997,20709379,20708098 Gene ID= ENSG00000241973.10 TPM= 39.24 Transcript Type= protein_coding chr22 20798478 20858812 20798478 20858812 - ENST00000485963.5@PI4KA ENST00000485963.5 protein_coding 20858570,20838615,20834562,20824326,20820539,20819641,20818483,20813358,20810967,20807362,20804974,20804300,20803191,20801973,20799671,20799093,20798478 20858812,20838731,20834655,20824414,20820611,20819900,20818549,20813506,20811032,20807458,20805165,20804400,20803320,20802105,20799766,20799276,20798687 Gene ID= ENSG00000241973.10 TPM= 1.81 Transcript Type= retained_intron chr22 20858983 20891218 20858983 20891218 + ENST00000215730.11@SNAP29 ENST00000215730.11 protein_coding 20858983,20870337,20881049,20883471,20887679 20859347,20870533,20881134,20883569,20891218 Gene ID= ENSG00000099940.11 TPM= 55.24 Transcript Type= protein_coding chr22 20917355 20953746 20917355 20953746 + transcript401.chr22.nnic@CRKL transcript401.chr22.nnic protein_coding 20917355,20933779,20949711,20953206 20918245,20934244,20951265,20953746 Gene ID= ENSG00000099942.12 TPM= 12.68 Transcript Type= NA chr22 20917426 20953749 20917426 20953749 + ENST00000354336.7@CRKL ENST00000354336.7 protein_coding 20917426,20933779,20949711 20918245,20934244,20953749 Gene ID= ENSG00000099942.12 TPM= 74.25 Transcript Type= protein_coding chr22 20982309 20999038 20982309 20999038 + transcript407.chr22.nic@LZTR1 transcript407.chr22.nic protein_coding 20982309,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994558,20994915,20995746,20995963,20996696,20996886,20997232 20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994269,20994727,20995026,20995872,20996112,20996801,20996966,20999038 Gene ID= ENSG00000099949.18 TPM= 7.02 Transcript Type= NA chr22 20982293 20999038 20982293 20999038 + transcript408.chr22.nic@LZTR1 transcript408.chr22.nic protein_coding 20982293,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994558,20994870,20995746,20995963,20996696,20997232 20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994269,20994727,20995026,20995872,20996112,20996966,20999038 Gene ID= ENSG00000099949.18 TPM= 5.21 Transcript Type= NA chr22 20982273 20999038 20982273 20999038 + transcript409.chr22.nic@LZTR1 transcript409.chr22.nic protein_coding 20982273,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994870,20995746,20995963,20996696,20996886,20997232 20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994727,20995026,20995872,20996112,20996801,20996966,20999038 Gene ID= ENSG00000099949.18 TPM= 12.45 Transcript Type= NA chr22 20982013 20999038 20982013 20999038 + ENST00000215739.12@LZTR1 ENST00000215739.12 protein_coding 20982013,20983027,20985841,20987504,20988010,20988789,20989625,20990386,20991628,20992214,20992794,20993662,20993924,20994104,20994558,20994870,20995746,20995963,20996696,20996886,20997232 20982571,20983089,20985897,20987583,20988118,20988872,20989682,20990525,20991829,20992369,20992904,20993754,20994019,20994269,20994727,20995026,20995872,20996112,20996801,20996966,20999038 Gene ID= ENSG00000099949.18 TPM= 77.65 Transcript Type= protein_coding chr22 20999771 21001806 20999771 21001806 - transcript419.chr22.nnic@THAP7 transcript419.chr22.nnic protein_coding 21001564,21001256,21000647,20999771 21001806,21001411,21000787,21000432 Gene ID= ENSG00000184436.11 TPM= 3.17 Transcript Type= NA chr22 20999773 21001795 20999773 21001795 - ENST00000471073.1@THAP7 ENST00000471073.1 protein_coding 21000647,20999773 21001795,21000432 Gene ID= ENSG00000184436.11 TPM= 16.3 Transcript Type= retained_intron chr22 20999772 21002086 20999772 21002086 - ENST00000215742.8@THAP7 ENST00000215742.8 protein_coding 21001832,21001256,21000647,20999772 21002086,21001411,21000787,21000432 Gene ID= ENSG00000184436.11 TPM= 3.17 Transcript Type= protein_coding chr22 21001922 21003272 21001922 21003272 + ENST00000429962.1@THAP7-AS1 ENST00000429962.1 antisense_RNA 21001922,21002918 21002829,21003272 Gene ID= ENSG00000230513.1 TPM= 5.43 Transcript Type= antisense_RNA chr22 21015027 21028830 21015027 21028830 + ENST00000413302.6@P2RX6 ENST00000413302.6 protein_coding 21015027,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026011,21026252,21026420 21015338,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21026076,21026329,21028830 Gene ID= ENSG00000099957.16 TPM= 14.04 Transcript Type= protein_coding chr22 21015123 21028009 21015123 21028009 + transcript432.chr22.nnic@P2RX6 transcript432.chr22.nnic protein_coding 21015123,21015942,21022676,21022942,21023118,21023275,21023509,21025805,21026011,21026768,21027498 21015338,21016092,21022751,21023035,21023198,21023416,21023618,21025898,21026076,21026957,21028009 Gene ID= ENSG00000099957.16 TPM= 1.81 Transcript Type= NA chr22 21015123 21028013 21015123 21028013 + transcript435.chr22.nnic@P2RX6 transcript435.chr22.nnic protein_coding 21015123,21015942,21017989,21022676,21022942,21023118,21023275,21023509,21025805,21026420 21015338,21016092,21018060,21022751,21023035,21023198,21023416,21023618,21025898,21028013 Gene ID= ENSG00000099957.16 TPM= 3.17 Transcript Type= NA chr22 21028718 21032549 21028718 21032549 - ENST00000403586.5@SLC7A4 ENST00000403586.5 protein_coding 21032531,21030831,21029711,21029336,21028718 21032549,21031855,21030351,21029444,21029230 Gene ID= ENSG00000099960.12 TPM= 1.81 Transcript Type= protein_coding chr22 21028718 21032558 21028718 21032558 - ENST00000382932.2@SLC7A4 ENST00000382932.2 protein_coding 21032531,21030831,21029711,21029336,21028718 21032558,21031852,21030351,21029444,21029230 Gene ID= ENSG00000099960.12 TPM= 1.81 Transcript Type= protein_coding chr22 21472994 21517526 21472994 21517526 - transcript440.chr22.nic@PI4KAP2 transcript440.chr22.nic transcribed_unprocessed_pseudogene 21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476644,21476002,21475211,21474597,21472994 21517526,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21476160,21475300,21474680,21473405 Gene ID= ENSG00000183506.17 TPM= 8.94 Transcript Type= NA chr22 21472994 21517526 21472994 21517526 - transcript445.chr22.nic@PI4KAP2 transcript445.chr22.nic transcribed_unprocessed_pseudogene 21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476002,21475211,21474597,21472994 21517526,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21475300,21474680,21473405 Gene ID= ENSG00000183506.17 TPM= 5.61 Transcript Type= NA chr22 21472994 21517511 21472994 21517511 - transcript449.chr22.nnic@PI4KAP2 transcript449.chr22.nnic transcribed_unprocessed_pseudogene 21517325,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477790,21476644,21476002,21475211,21474597,21472994 21517511,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915,21476764,21476160,21475300,21474680,21473405 Gene ID= ENSG00000183506.17 TPM= 2.29 Transcript Type= NA chr22 21477413 21517520 21477413 21517520 - ENST00000479693.1@PI4KAP2 ENST00000479693.1 transcribed_unprocessed_pseudogene 21517325,21491994,21488224,21487872,21487565,21486800,21484005,21483020,21479930,21479759,21478585,21477997,21477413 21517520,21492094,21488381,21488023,21487672,21486927,21484134,21483090,21480002,21479829,21478694,21478101,21477915 Gene ID= ENSG00000183506.17 TPM= 1.39 Transcript Type= retained_intron chr22 21567547 21624034 21567547 21624034 + ENST00000342192.8@UBE2L3 ENST00000342192.8 protein_coding 21567547,21592861,21610857,21621515 21567771,21592956,21611043,21624034 Gene ID= ENSG00000185651.14 TPM= 130.4 Transcript Type= protein_coding chr22 21567730 21624034 21567730 21624034 + ENST00000496722.1@UBE2L3 ENST00000496722.1 protein_coding 21567730,21592861,21610857,21621515 21568377,21592956,21611043,21624034 Gene ID= ENSG00000185651.14 TPM= 5.43 Transcript Type= retained_intron chr22 21628089 21630064 21628089 21630064 - ENST00000292778.10@YDJC ENST00000292778.10 protein_coding 21629851,21629602,21629308,21629010,21628089 21630064,21629761,21629407,21629187,21628787 Gene ID= ENSG00000161179.13 TPM= 22.87 Transcript Type= protein_coding chr22 21628114 21630038 21628114 21630038 - ENST00000473985.1@YDJC ENST00000473985.1 protein_coding 21629851,21629308,21629010,21628114 21630038,21629761,21629187,21628787 Gene ID= ENSG00000161179.13 TPM= 4.53 Transcript Type= retained_intron chr22 21628089 21630031 21628089 21630031 - ENST00000468686.5@YDJC ENST00000468686.5 protein_coding 21629308,21628089 21630031,21628787 Gene ID= ENSG00000161179.13 TPM= 2.04 Transcript Type= retained_intron chr22 21628089 21630064 21628089 21630064 - ENST00000415762.6@YDJC ENST00000415762.6 protein_coding 21629851,21629543,21629308,21629010,21628089 21630064,21629761,21629407,21629187,21628787 Gene ID= ENSG00000161179.13 TPM= 10.19 Transcript Type= nonsense_mediated_decay chr22 21628089 21630012 21628089 21630012 - ENST00000464015.5@YDJC ENST00000464015.5 protein_coding 21629851,21629010,21628089 21630012,21629761,21628787 Gene ID= ENSG00000161179.13 TPM= 2.04 Transcript Type= retained_intron chr22 21642261 21644298 21642261 21644298 + ENST00000248958.4@SDF2L1 ENST00000248958.4 protein_coding 21642261,21642862,21643894 21642523,21643058,21644298 Gene ID= ENSG00000128228.4 TPM= 50.71 Transcript Type= protein_coding chr22 21666009 21700015 21666009 21700015 + ENST00000335025.12@PPIL2 ENST00000335025.12 protein_coding 21666009,21669913,21670566,21670997,21672330,21675064,21681299,21682437,21683182,21684753,21686483,21686892,21687643,21688073,21688732,21693816,21694593,21694755,21694937,21695394,21696747 21666131,21669962,21670611,21671059,21672381,21675115,21681390,21682526,21683257,21684913,21686558,21686998,21687732,21688106,21688849,21693872,21694665,21694817,21695070,21695496,21700015 Gene ID= ENSG00000100023.18 TPM= 27.17 Transcript Type= protein_coding chr22 21666022 21697866 21666022 21697866 + ENST00000626352.2@PPIL2 ENST00000626352.2 protein_coding 21666022,21669913,21670566,21670997,21672330,21675064,21681299,21682437,21683182,21684753,21686483,21686892,21687643,21688073,21688732,21693816,21694593,21694755,21694937,21695398,21696885 21666131,21669962,21670611,21671059,21672381,21675115,21681390,21682526,21683257,21684913,21686558,21686998,21687732,21688106,21688849,21693872,21694665,21694817,21695070,21695496,21697866 Gene ID= ENSG00000100023.18 TPM= 14.04 Transcript Type= protein_coding chr22 21697547 21735804 21697547 21735804 - transcript482.chr22.nnic@YPEL1 transcript482.chr22.nnic protein_coding 21735615,21710628,21703839,21703370,21700976,21697547 21735804,21710908,21703882,21703478,21701218,21697771 Gene ID= ENSG00000100027.14 TPM= 2.72 Transcript Type= NA chr22 21697544 21735834 21697544 21735834 - ENST00000339468.7@YPEL1 ENST00000339468.7 protein_coding 21735615,21710628,21703839,21703370,21697544 21735834,21710908,21703882,21703478,21701218 Gene ID= ENSG00000100027.14 TPM= 1.36 Transcript Type= protein_coding chr22 21769040 21867680 21769040 21867680 - ENST00000398822.7@MAPK1 ENST00000398822.7 protein_coding 21867322,21807664,21805850,21799012,21788694,21788257,21772873,21769040 21867680,21807846,21806039,21799128,21788808,21788388,21772982,21769320 Gene ID= ENSG00000100030.14 TPM= 6.34 Transcript Type= protein_coding chr22 21919418 21938583 21919418 21938583 - transcript495.chr22.nic@PPM1F transcript495.chr22.nic protein_coding 21938204,21934024,21933391,21931148,21925569,21919418 21938583,21934226,21933579,21931291,21925662,21923471 Gene ID= ENSG00000100034.13 TPM= 10.41 Transcript Type= NA chr22 21919420 21952837 21919420 21952837 - ENST00000263212.9@PPM1F ENST00000263212.9 protein_coding 21952792,21945843,21939532,21934024,21933391,21931148,21925569,21919420 21952837,21946108,21939680,21934226,21933579,21931291,21925662,21923471 Gene ID= ENSG00000100034.13 TPM= 71.09 Transcript Type= protein_coding chr22 21957026 21982822 21957026 21982822 - transcript498.chr22.nic@TOP3B transcript498.chr22.nic protein_coding 21982730,21975640,21974357,21972612,21971877,21970980,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957026 21982822,21975807,21974488,21972718,21971951,21971061,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595 Gene ID= ENSG00000100038.19 TPM= 4.53 Transcript Type= NA chr22 21957026 21982807 21957026 21982807 - transcript499.chr22.nic@TOP3B transcript499.chr22.nic protein_coding 21982730,21975981,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957026 21982807,21976187,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595 Gene ID= ENSG00000100038.19 TPM= 2.72 Transcript Type= NA chr22 21957025 21982816 21957025 21982816 - ENST00000357179.9@TOP3B ENST00000357179.9 protein_coding 21982730,21975640,21974357,21972612,21971877,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959587,21959132,21958492,21957025 21982816,21975807,21974488,21972718,21971951,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21959232,21958693,21957595 Gene ID= ENSG00000100038.19 TPM= 4.53 Transcript Type= protein_coding chr22 21957031 21982790 21957031 21982790 - ENST00000444502.5@TOP3B ENST00000444502.5 protein_coding 21982730,21975640,21974357,21972612,21971877,21970980,21970210,21968619,21967603,21965285,21964161,21963923,21962747,21962429,21960321,21959132,21957031 21982790,21975807,21974488,21972718,21971951,21971061,21970406,21968775,21967716,21965375,21964315,21964028,21962893,21962602,21960449,21959736,21958693 Gene ID= ENSG00000100038.19 TPM= 3.62 Transcript Type= nonsense_mediated_decay chr22 22298130 22309691 22298130 22309691 + transcript514.chr22.nnic@AC245060.4 transcript514.chr22.nnic unprocessed_pseudogene 22298130,22303224,22303943,22306790,22307106 22298211,22303297,22304114,22307021,22309691 Gene ID= ENSG00000272779.1 TPM= 16.3 Transcript Type= NA chr22 22322454 22901435 22322454 22901435 + transcript515.chr22.nnic@IGLV1-51 transcript515.chr22.nnic IG_V_gene 22322454,22322663,22404543,22899616,22900976 22322553,22322789,22404716,22899655,22901435 Gene ID= ENSG00000211644.3 TPM= 8.96 Transcript Type= NA chr22 22375851 22907076 22375851 22907076 + transcript518.chr22.nnic@IGLV5-45 transcript518.chr22.nnic IG_V_gene 22375851,22376183,22792934,22904977,22906342 22376059,22376438,22792974,22905025,22907076 Gene ID= ENSG00000211650.2 TPM= 250.17 Transcript Type= NA chr22 22513736 22520270 22513736 22520270 - ENST00000302097.3@ZNF280A ENST00000302097.3 protein_coding 22520089,22513736 22520270,22515701 Gene ID= ENSG00000169548.3 TPM= 2.72 Transcript Type= protein_coding chr22 22547701 22559340 22547701 22559340 - ENST00000398743.6@PRAME ENST00000398743.6 protein_coding 22559175,22557545,22556812,22550767,22549726,22547701 22559340,22557580,22556930,22551089,22550334,22548643 Gene ID= ENSG00000185686.17 TPM= 1.36 Transcript Type= protein_coding chr22 22547701 22559361 22547701 22559361 - ENST00000492657.5@PRAME ENST00000492657.5 protein_coding 22559175,22556812,22550767,22549726,22547701 22559361,22557580,22551089,22550334,22548643 Gene ID= ENSG00000185686.17 TPM= 1.36 Transcript Type= retained_intron chr22 22579799 22901435 22579799 22901435 + transcript541.chr22.nnic@IGLL5 transcript541.chr22.nnic protein_coding 22579799,22758904,22899616,22900976 22579887,22759208,22899655,22901435 Gene ID= ENSG00000254709.7 TPM= 10.31 Transcript Type= NA chr22 22664438 22901435 22664438 22901435 + transcript543.chr22.nnic@IGLL5 transcript543.chr22.nnic protein_coding 22664438,22758904,22899616,22900976 22664518,22759208,22899655,22901435 Gene ID= ENSG00000254709.7 TPM= 15.75 Transcript Type= NA chr22 22887829 22895825 22887829 22895825 + ENST00000531372.1@IGLL5 ENST00000531372.1 protein_coding 22887829,22895375 22888259,22895825 Gene ID= ENSG00000254709.7 TPM= 1.81 Transcript Type= protein_coding chr22 22712379 22901435 22712379 22901435 + transcript553.chr22.nnic@IGLV3-21 transcript553.chr22.nnic IG_V_gene 22712379,22712899,22899616,22900976 22712464,22713183,22899655,22901435 Gene ID= ENSG00000211662.2 TPM= 11.67 Transcript Type= NA chr22 23059415 23142093 23059415 23142093 - ENST00000216036.8@RSPH14 ENST00000216036.8 protein_coding 23141949,23140222,23138840,23134026,23063902,23061809,23059415 23142093,23140472,23138942,23134144,23064133,23061945,23059718 Gene ID= ENSG00000100218.11 TPM= 3.62 Transcript Type= protein_coding chr22 23131192 23142076 23131192 23142076 - transcript588.chr22.nic@RSPH14 transcript588.chr22.nic protein_coding 23141949,23140222,23138840,23131192 23142076,23140472,23138942,23134144 Gene ID= ENSG00000100218.11 TPM= 1.81 Transcript Type= NA chr22 23070361 23125037 23070361 23125037 + ENST00000615612.1@GNAZ ENST00000615612.1 protein_coding 23070361,23095247,23123087 23070570,23096418,23125037 Gene ID= ENSG00000128266.8 TPM= 19.92 Transcript Type= protein_coding chr22 23145326 23164350 23145326 23164350 + ENST00000263116.6@RAB36 ENST00000263116.6 protein_coding 23145326,23146605,23150063,23152461,23153033,23155968,23157992,23158898,23159163,23160879,23161500 23145551,23146685,23150154,23152526,23153134,23156032,23158043,23158979,23159253,23160998,23164350 Gene ID= ENSG00000100228.12 TPM= 9.06 Transcript Type= protein_coding chr22 23180504 23318036 23180504 23318036 + transcript598.chr22.nnic@BCR transcript598.chr22.nnic protein_coding 23180504,23180840,23253799,23260950,23261355,23268408,23271532,23273081,23273634,23283977,23285033,23287159,23288097,23289517,23290339,23292541,23295024,23309424,23310324,23311697,23312887,23313968,23314552,23315433 23180561,23182239,23253980,23261054,23261540,23268515,23271592,23273133,23273774,23284098,23285201,23287278,23288172,23289621,23290413,23292638,23295155,23309483,23310433,23311836,23313021,23314073,23314714,23318036 Gene ID= ENSG00000186716.20 TPM= 38.21 Transcript Type= NA chr22 23180210 23318037 23180210 23318037 + ENST00000305877.12@BCR ENST00000305877.12 protein_coding 23180210,23253799,23260950,23261355,23268408,23271532,23273081,23273634,23283977,23285033,23287159,23288097,23289517,23290339,23292541,23295024,23309424,23310324,23311697,23312887,23313968,23314552,23315433 23182239,23253980,23261054,23261540,23268515,23271592,23273133,23273774,23284098,23285201,23287278,23288172,23289621,23290413,23292638,23295155,23309483,23310433,23311836,23313021,23314073,23314714,23318037 Gene ID= ENSG00000186716.20 TPM= 60.85 Transcript Type= protein_coding chr22 23638490 23717371 23638490 23717371 - transcript616.chr22.nnic@GUSBP11 transcript616.chr22.nnic processed_transcript 23717108,23715009,23714187,23709786,23709130,23705429,23700726,23695173,23694119,23690232,23683725,23659865,23652861,23652479,23640308,23638490 23717371,23715194,23714342,23709867,23709241,23705541,23700845,23695517,23694421,23690356,23683867,23660000,23652944,23652576,23640423,23638942 Gene ID= ENSG00000228315.11 TPM= 1.81 Transcript Type= NA chr22 23653171 23717431 23653171 23717431 - transcript622.chr22.nnic@AP000347.2 transcript622.chr22.nnic processed_transcript 23717031,23715009,23714187,23709786,23709130,23705429,23694119,23690232,23659865,23653171 23717431,23715194,23714342,23709867,23709241,23705541,23695517,23690356,23660000,23653352 Gene ID= ENSG00000273000.5 TPM= 2.72 Transcript Type= NA chr22 23752743 23754468 23752743 23754468 - ENST00000248948.3@VPREB3 ENST00000248948.3 protein_coding 23754315,23752743 23754468,23753198 Gene ID= ENSG00000128218.7 TPM= 9.06 Transcript Type= protein_coding chr22 23765834 23768443 23765834 23768443 - ENST00000484558.2@CHCHD10 ENST00000484558.2 protein_coding 23767834,23767374,23766128,23765834 23768443,23767593,23766275,23766026 Gene ID= ENSG00000250479.8 TPM= 49.8 Transcript Type= protein_coding chr22 23772819 23784316 23772819 23784316 + ENST00000215743.7@MMP11 ENST00000215743.7 protein_coding 23772819,23779187,23780359,23780582,23780859,23781193,23782226,23783411 23772978,23779416,23780502,23780715,23781100,23781409,23782483,23784316 Gene ID= ENSG00000099953.9 TPM= 16.3 Transcript Type= protein_coding chr22 23786994 23834516 23786994 23834516 + ENST00000407422.7@SMARCB1 ENST00000407422.7 protein_coding 23786994,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141 23787262,23791867,23793688,23801081,23803422,23816936,23825415,23833703,23834516 Gene ID= ENSG00000099956.18 TPM= 101.87 Transcript Type= protein_coding chr22 23786963 23834516 23786963 23834516 + ENST00000344921.10@SMARCB1 ENST00000344921.10 protein_coding 23786963,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141 23787262,23791867,23793688,23801135,23803422,23816936,23825415,23833703,23834516 Gene ID= ENSG00000099956.18 TPM= 6.79 Transcript Type= protein_coding chr22 23786974 23834516 23786974 23834516 + ENST00000263121.11@SMARCB1 ENST00000263121.11 protein_coding 23786974,23791756,23793559,23800944,23803295,23816770,23825225,23833572,23834141 23787262,23791894,23793688,23801081,23803422,23816936,23825415,23833703,23834516 Gene ID= ENSG00000099956.18 TPM= 115.46 Transcript Type= protein_coding chr22 23856703 23886309 23856703 23886309 + ENST00000345044.10@SLC2A11 ENST00000345044.10 protein_coding 23856703,23862104,23868481,23875117,23877042,23877721,23882459,23882759,23883772,23883949,23884302,23884649 23856991,23862202,23868641,23875241,23877171,23877869,23882646,23882869,23883873,23884024,23884429,23886309 Gene ID= ENSG00000133460.19 TPM= 2.72 Transcript Type= protein_coding chr22 23857227 23886307 23857227 23886307 + transcript644.chr22.nic@SLC2A11 transcript644.chr22.nic protein_coding 23857227,23862104,23868481,23875117,23877042,23877721,23882459,23882759,23883772,23883949,23884302,23884649 23857531,23862202,23868641,23875241,23877171,23877869,23882646,23882869,23883873,23884024,23884429,23886307 Gene ID= ENSG00000133460.19 TPM= 1.81 Transcript Type= NA chr22 23894004 23895226 23894004 23895226 + ENST00000215754.7@MIF ENST00000215754.7 protein_coding 23894004,23894772,23895040 23894582,23894944,23895226 Gene ID= ENSG00000240972.1 TPM= 883.81 Transcript Type= protein_coding chr22 23894698 23895227 23894698 23895227 + ENST00000498385.1@MIF ENST00000498385.1 protein_coding 23894698,23895040 23894944,23895227 Gene ID= ENSG00000240972.1 TPM= 8.15 Transcript Type= retained_intron chr22 23957416 23961236 23957416 23961236 - transcript664.chr22.nnic@GSTT2B transcript664.chr22.nnic protein_coding 23961020,23960294,23958551,23958285,23957416 23961236,23960381,23958631,23958458,23957932 Gene ID= ENSG00000133433.10 TPM= 2.72 Transcript Type= NA chr22 23957412 23961216 23957412 23961216 - transcript681.chr22.nic@GSTT2B transcript681.chr22.nic protein_coding 23958551,23958285,23957412 23961216,23958458,23957932 Gene ID= ENSG00000133433.10 TPM= 9.13 Transcript Type= NA chr22 23957414 23961186 23957414 23961186 - ENST00000290765.8@GSTT2B ENST00000290765.8 protein_coding 23961020,23960294,23958551,23958285,23957414 23961186,23960381,23958701,23958458,23957932 Gene ID= ENSG00000133433.10 TPM= 79.69 Transcript Type= protein_coding chr22 23966901 23972532 23966901 23972532 + ENST00000215770.5@DDTL ENST00000215770.5 protein_coding 23966901,23967386,23971286 23967022,23967561,23972532 Gene ID= ENSG00000099974.7 TPM= 4.53 Transcript Type= protein_coding chr22 23971365 23974584 23971365 23974584 - ENST00000398344.8@DDT ENST00000398344.8 protein_coding 23974307,23973768,23971365 23974584,23973943,23971623 Gene ID= ENSG00000099977.13 TPM= 95.99 Transcript Type= protein_coding chr22 23980116 23983914 23980116 23983914 + transcript685.chr22.nic@GSTT2 transcript685.chr22.nic polymorphic_pseudogene 23980116,23982871,23983397 23982778,23983044,23983914 Gene ID= ENSG00000099984.11 TPM= 9.06 Transcript Type= NA chr22 24011405 24092014 24011405 24092014 + transcript689.chr22.nic@CABIN1 transcript689.chr22.nic protein_coding 24011405,24035444,24036089,24038348,24041139,24042904,24049091,24050825,24054873,24056192,24059227,24059924,24061947,24062959,24064035,24066987,24070800,24072354,24076169,24083228,24084579,24085006,24087452,24091583 24011728,24035520,24036181,24038461,24041273,24043084,24049220,24050974,24055159,24056360,24059363,24060141,24062025,24063146,24064187,24067181,24071042,24072510,24076284,24083389,24084785,24085151,24087713,24092014 Gene ID= ENSG00000099991.17 TPM= 2.72 Transcript Type= NA chr22 24011418 24178628 24011418 24178628 + ENST00000398319.6@CABIN1 ENST00000398319.6 protein_coding 24011418,24035444,24036089,24038348,24041139,24042904,24049091,24050825,24054873,24056192,24059227,24059924,24061947,24062959,24064035,24066987,24070800,24072354,24076169,24083228,24084579,24085006,24087452,24091583,24095931,24098014,24113566,24119367,24134302,24164400,24165530,24166639,24168447,24171713,24176111,24177504,24178053 24011728,24035520,24036181,24038461,24041273,24043084,24049220,24050974,24055159,24056360,24059363,24060141,24062025,24063146,24064187,24067181,24071042,24072510,24076284,24083389,24084785,24085151,24087713,24091843,24096082,24098192,24113748,24119698,24134415,24164563,24165626,24167313,24168521,24171995,24176275,24177817,24178628 Gene ID= ENSG00000099991.17 TPM= 9.06 Transcript Type= protein_coding chr22 24181259 24189110 24181259 24189110 + ENST00000358321.3@SUSD2 ENST00000358321.3 protein_coding 24181259,24183057,24183495,24184136,24184766,24185094,24185486,24185661,24186016,24186257,24187202,24187571,24187959,24188225,24188412 24181595,24183267,24183646,24184303,24184940,24185295,24185571,24185929,24186159,24186415,24187450,24187843,24188135,24188327,24189110 Gene ID= ENSG00000099994.10 TPM= 57.95 Transcript Type= protein_coding chr22 24219653 24245153 24219653 24245153 - transcript698.chr22.nic@GGT5 transcript698.chr22.nic protein_coding 24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24220492,24219653 24245153,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220584,24220116 Gene ID= ENSG00000099998.17 TPM= 21.96 Transcript Type= NA chr22 24219653 24245081 24219653 24245081 - transcript723.chr22.nnic@GGT5 transcript723.chr22.nnic protein_coding 24244553,24233874,24233498,24232823,24232051,24231384,24226631,24226076,24225546,24224996,24219653 24245081,24234004,24233593,24233018,24232208,24231530,24226767,24226266,24225652,24225106,24220116 Gene ID= ENSG00000099998.17 TPM= 4.75 Transcript Type= NA chr22 24219654 24245078 24219654 24245078 - ENST00000263112.11@GGT5 ENST00000263112.11 protein_coding 24244553,24233874,24232823,24232051,24231384,24226631,24226076,24225546,24225245,24224996,24219654 24245078,24234004,24233018,24232208,24231530,24226767,24226266,24225652,24225411,24225106,24220116 Gene ID= ENSG00000099998.17 TPM= 34.64 Transcript Type= protein_coding chr22 24247884 24264796 24247884 24264796 + transcript729.chr22.nnic@POM121L9P transcript729.chr22.nnic transcribed_unprocessed_pseudogene 24247884,24248756,24258767,24260908,24261693,24263500 24248021,24249349,24258873,24261036,24262607,24264796 Gene ID= ENSG00000128262.8 TPM= 1.81 Transcript Type= NA chr22 24270817 24417739 24270817 24417739 + ENST00000437398.5@SPECC1L ENST00000437398.5 protein_coding 24270817,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534 24270983,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417739 Gene ID= ENSG00000100014.19 TPM= 14.94 Transcript Type= protein_coding chr22 24270840 24417740 24270840 24417740 + ENST00000314328.13@SPECC1L ENST00000314328.13 protein_coding 24270840,24276700,24302195,24313313,24321288,24324220,24328846,24330256,24334410,24338386,24347086,24363261,24365476,24369218,24411588,24412648,24414534 24270983,24276803,24302384,24313466,24322918,24324427,24328919,24330431,24334573,24338477,24347176,24363344,24365632,24369320,24411704,24412707,24417740 Gene ID= ENSG00000100014.19 TPM= 8.6 Transcript Type= protein_coding chr22 24423597 24442356 24423597 24442356 + ENST00000611543.4@ADORA2A ENST00000611543.4 protein_coding 24423597,24433131,24440583 24423628,24433736,24442356 Gene ID= ENSG00000128271.21 TPM= 3.02 Transcript Type= protein_coding chr22 24423612 24442356 24423612 24442356 + transcript744.chr22.nic@ADORA2A transcript744.chr22.nic protein_coding 24423612,24433131,24440583 24423957,24433736,24442356 Gene ID= ENSG00000128271.21 TPM= 24.75 Transcript Type= NA chr22 24427562 24442360 24427562 24442360 + ENST00000337539.11@ADORA2A ENST00000337539.11 protein_coding 24427562,24433131,24440583 24427746,24433736,24442360 Gene ID= ENSG00000128271.21 TPM= 3.02 Transcript Type= protein_coding chr22 24540441 24555200 24540441 24555200 - transcript752.chr22.nnic@GUCD1 transcript752.chr22.nnic protein_coding 24554949,24548917,24547908,24546914,24543842,24540441 24555200,24549001,24548073,24547005,24543954,24543097 Gene ID= ENSG00000138867.16 TPM= 11.02 Transcript Type= NA chr22 24540438 24555316 24540438 24555316 - ENST00000435822.5@GUCD1 ENST00000435822.5 protein_coding 24554949,24548917,24547908,24546914,24543842,24540438 24555316,24549001,24548073,24547005,24544083,24543097 Gene ID= ENSG00000138867.16 TPM= 85.28 Transcript Type= protein_coding chr22 24540423 24555935 24540423 24555935 - ENST00000621833.4@GUCD1 ENST00000621833.4 protein_coding 24555615,24548917,24547908,24546914,24543842,24540423 24555935,24549001,24548073,24547005,24544083,24543100 Gene ID= ENSG00000138867.16 TPM= 13.28 Transcript Type= protein_coding chr22 24585634 24593113 24585634 24593113 - transcript761.chr22.nic@LRRC75B transcript761.chr22.nic protein_coding 24592863,24592217,24589821,24588679,24588214,24585634 24593113,24592423,24589949,24589265,24588329,24586411 Gene ID= ENSG00000178026.12 TPM= 1.81 Transcript Type= NA chr22 24585634 24593103 24585634 24593103 - transcript765.chr22.nic@LRRC75B transcript765.chr22.nic protein_coding 24592217,24589821,24588679,24588214,24585634 24593103,24589949,24589393,24588329,24586411 Gene ID= ENSG00000178026.12 TPM= 1.81 Transcript Type= NA chr22 24585634 24593101 24585634 24593101 - transcript766.chr22.nic@LRRC75B transcript766.chr22.nic protein_coding 24592863,24589821,24588679,24588214,24585634 24593101,24589949,24589393,24588329,24586411 Gene ID= ENSG00000178026.12 TPM= 1.81 Transcript Type= NA chr22 24585634 24593101 24585634 24593101 - transcript771.chr22.nic@LRRC75B transcript771.chr22.nic protein_coding 24592863,24589821,24588214,24585634 24593101,24589949,24589265,24586411 Gene ID= ENSG00000178026.12 TPM= 1.81 Transcript Type= NA chr22 24585620 24593066 24585620 24593066 - ENST00000446942.5@LRRC75B ENST00000446942.5 protein_coding 24592863,24589821,24588679,24588214,24585620 24593066,24589949,24589265,24588329,24586411 Gene ID= ENSG00000178026.12 TPM= 2.26 Transcript Type= nonsense_mediated_decay chr22 24585620 24593063 24585620 24593063 - ENST00000318753.12@LRRC75B ENST00000318753.12 protein_coding 24592863,24589821,24588214,24585620 24593063,24589949,24588329,24586411 Gene ID= ENSG00000178026.12 TPM= 2.26 Transcript Type= protein_coding chr22 24603171 24629011 24603171 24629011 + transcript777.chr22.nic@GGT1 transcript777.chr22.nic protein_coding 24603171,24607954,24609965,24610358,24611075,24614776,24615041,24620328,24620913,24623107,24623780,24627432,24627852,24628081,24628275,24628693 24603321,24608023,24610033,24610531,24611245,24614906,24615127,24620520,24621070,24623256,24623916,24627619,24627979,24628193,24628388,24629011 Gene ID= ENSG00000100031.18 TPM= 4.53 Transcript Type= NA chr22 25351462 25405406 25351462 25405406 - transcript786.chr22.nic@LRP5L transcript786.chr22.nic protein_coding 25405202,25381381,25375813,25359827,25357255,25354596,25351462 25405406,25381578,25376008,25360223,25357426,25354812,25351902 Gene ID= ENSG00000100068.11 TPM= 2.72 Transcript Type= NA chr22 25448086 25461677 25448086 25461677 + transcript787.chr22.nnic@CRYBB2P1 transcript787.chr22.nnic transcribed_unprocessed_pseudogene 25448086,25453316,25455712,25457259,25459416,25460867 25448284,25453434,25455840,25457401,25459515,25461677 Gene ID= ENSG00000100058.12 TPM= 2.72 Transcript Type= NA chr22 25448086 25461673 25448086 25461673 + transcript790.chr22.nnic@CRYBB2P1 transcript790.chr22.nnic transcribed_unprocessed_pseudogene 25448086,25453316,25455712,25457259,25459416 25448284,25453434,25455840,25457401,25461673 Gene ID= ENSG00000100058.12 TPM= 2.72 Transcript Type= NA chr22 25448087 25461673 25448087 25461673 + transcript792.chr22.nic@CRYBB2P1 transcript792.chr22.nic transcribed_unprocessed_pseudogene 25448087,25455712,25457259,25459416 25448284,25455840,25457401,25461673 Gene ID= ENSG00000100058.12 TPM= 1.81 Transcript Type= NA chr22 25448105 25461678 25448105 25461678 + ENST00000382734.9@CRYBB2P1 ENST00000382734.9 transcribed_unprocessed_pseudogene 25448105,25455712,25457259,25459416,25460867 25448284,25455840,25457401,25459515,25461678 Gene ID= ENSG00000100058.12 TPM= 7.24 Transcript Type= processed_transcript chr22 25564638 25723783 25564638 25723783 + transcript795.chr22.nic@GRK3 transcript795.chr22.nic protein_coding 25564638,25604377,25661576,25663630,25667739,25672296,25674437,25678816,25685170,25687537,25690189,25695107,25703510,25704109,25709898,25711068,25714408,25718245,25721284,25722289 25565153,25604453,25661677,25663704,25667800,25672347,25674528,25678915,25685248,25687667,25690283,25695214,25703576,25704209,25709964,25711163,25714570,25718381,25721397,25723783 Gene ID= ENSG00000100077.14 TPM= 4.53 Transcript Type= NA chr22 26452100 26483856 26452100 26483856 - transcript808.chr22.nic@HPS4 transcript808.chr22.nic protein_coding 26483765,26481722,26479265,26476993,26472832,26472302,26470719,26468551,26466226,26466051,26465455,26463917,26458445,26457859,26452100 26483856,26482240,26479355,26477136,26472939,26472418,26470813,26468623,26466262,26466104,26465551,26464826,26458577,26457967,26453404 Gene ID= ENSG00000100099.20 TPM= 3.62 Transcript Type= NA chr22 26452088 26483856 26452088 26483856 - transcript809.chr22.nnic@HPS4 transcript809.chr22.nnic protein_coding 26483765,26481722,26479265,26476993,26472832,26472302,26470719,26468551,26467225,26466226,26465455,26463917,26458445,26457859,26452088 26483856,26482240,26479355,26477136,26472939,26472418,26470813,26468623,26467249,26466262,26465551,26464826,26458577,26457967,26453404 Gene ID= ENSG00000100099.20 TPM= 1.81 Transcript Type= NA chr22 26452083 26483795 26452083 26483795 - ENST00000336873.9@HPS4 ENST00000336873.9 protein_coding 26483765,26481722,26479265,26476993,26472832,26472302,26470719,26468551,26466226,26465455,26463917,26458445,26457859,26452083 26483795,26482240,26479355,26477136,26472939,26472418,26470813,26468623,26466262,26465551,26464826,26458577,26457967,26453404 Gene ID= ENSG00000100099.20 TPM= 11.77 Transcript Type= protein_coding chr22 26483877 26494658 26483877 26494658 + ENST00000215917.11@SRRD ENST00000215917.11 protein_coding 26483877,26486023,26488029,26488390,26490044,26491025,26491463 26484099,26486063,26488288,26488488,26490198,26491070,26494658 Gene ID= ENSG00000100104.13 TPM= 22.87 Transcript Type= protein_coding chr22 26491731 26512499 26491731 26512499 - transcript817.chr22.nnic@TFIP11 transcript817.chr22.nnic protein_coding 26512394,26512099,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491731 26512499,26512175,26510667,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368 Gene ID= ENSG00000100109.16 TPM= 4.15 Transcript Type= NA chr22 26491225 26512505 26491225 26512505 - ENST00000407690.5@TFIP11 ENST00000407690.5 protein_coding 26512394,26512099,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491225 26512505,26512175,26510702,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368 Gene ID= ENSG00000100109.16 TPM= 65.72 Transcript Type= protein_coding chr22 26491731 26512499 26491731 26512499 - transcript822.chr22.nic@TFIP11 transcript822.chr22.nic protein_coding 26512394,26510617,26510064,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491731 26512499,26512175,26510281,26506928,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368 Gene ID= ENSG00000100109.16 TPM= 3.24 Transcript Type= NA chr22 26491986 26512499 26491986 26512499 - ENST00000405938.5@TFIP11 ENST00000405938.5 protein_coding 26512394,26512099,26511119,26510617,26510064,26506775,26506303,26503666,26501900,26499104,26498869,26496721,26496073,26494797,26494139,26491986 26512499,26512175,26511195,26510702,26510281,26506928,26506459,26503793,26502052,26499631,26498975,26496889,26496316,26494939,26494304,26492368 Gene ID= ENSG00000100109.16 TPM= 4.53 Transcript Type= protein_coding chr22 26521983 26590163 26521983 26590163 - ENST00000338754.8@TPST2 ENST00000338754.8 protein_coding 26590053,26544604,26540789,26536288,26532695,26528214,26521983 26590163,26544675,26541718,26536486,26532745,26528262,26526267 Gene ID= ENSG00000128294.15 TPM= 155.37 Transcript Type= protein_coding chr22 26599278 26618088 26599278 26618088 - ENST00000215939.2@CRYBB1 ENST00000215939.2 protein_coding 26617977,26616140,26612072,26607889,26601879,26599278 26618088,26616338,26612190,26608021,26602021,26599673 Gene ID= ENSG00000100122.5 TPM= 2.72 Transcript Type= protein_coding chr22 27851669 27919268 27851669 27919268 - ENST00000335272.9@PITPNB ENST00000335272.9 protein_coding 27919172,27914317,27910964,27897801,27897130,27896552,27894555,27873738,27860131,27858387,27854854,27851669 27919268,27914347,27911109,27897892,27897137,27896626,27894638,27873815,27860241,27858509,27854939,27853663 Gene ID= ENSG00000180957.17 TPM= 84.22 Transcript Type= protein_coding chr22 27851670 27919255 27851670 27919255 - ENST00000320996.14@PITPNB ENST00000320996.14 protein_coding 27919172,27914317,27910964,27897801,27897130,27896552,27894555,27873738,27860131,27858387,27851670 27919255,27914347,27911109,27897892,27897137,27896626,27894638,27873815,27860241,27858509,27853663 Gene ID= ENSG00000180957.17 TPM= 2.72 Transcript Type= protein_coding chr22 27919410 28002677 27919410 28002677 + transcript847.chr22.nic@TTC28-AS1 transcript847.chr22.nic processed_transcript 27919410,27935151,27994473,27997411,27997986,27998604,27999430 27919545,27935230,27994653,27997739,27998152,27998838,28002677 Gene ID= ENSG00000235954.6 TPM= 5.43 Transcript Type= NA chr22 27919440 27986342 27919440 27986342 + ENST00000454996.5@TTC28-AS1 ENST00000454996.5 processed_transcript 27919440,27935151,27985692 27919545,27935230,27986342 Gene ID= ENSG00000235954.6 TPM= 1.81 Transcript Type= antisense_RNA chr22 28687743 28712234 28687743 28712234 - transcript858.chr22.nic@CHEK2 transcript858.chr22.nic protein_coding 28712112,28711909,28710006,28703505,28699838,28696901,28695710,28695127,28694032,28689135,28687743 28712234,28712017,28710059,28703566,28699937,28696987,28695873,28695242,28694117,28689215,28687986 Gene ID= ENSG00000183765.20 TPM= 2.72 Transcript Type= NA chr22 28742014 28757524 28742014 28757524 + transcript874.chr22.nnic@HSCB transcript874.chr22.nnic protein_coding 28742014,28743882,28751241,28757078 28742331,28743978,28751288,28757524 Gene ID= ENSG00000100209.9 TPM= 1.81 Transcript Type= NA chr22 28742012 28757524 28742012 28757524 + transcript875.chr22.nnic@HSCB transcript875.chr22.nnic protein_coding 28742012,28751241,28757078 28742331,28751288,28757524 Gene ID= ENSG00000100209.9 TPM= 5.43 Transcript Type= NA chr22 28742055 28757515 28742055 28757515 + ENST00000398941.6@HSCB ENST00000398941.6 protein_coding 28742055,28743882,28744615,28751241,28757078 28742331,28743978,28744709,28751288,28757515 Gene ID= ENSG00000100209.9 TPM= 1.81 Transcript Type= protein_coding chr22 28772674 28789295 28772674 28789295 + ENST00000249064.8@CCDC117 ENST00000249064.8 protein_coding 28772674,28773725,28780948,28783508,28786089 28773034,28773778,28781172,28783645,28789295 Gene ID= ENSG00000159873.9 TPM= 50.71 Transcript Type= protein_coding chr22 28794558 28800599 28794558 28800599 - transcript886.chr22.nic@XBP1 transcript886.chr22.nic protein_coding 28800298,28799057,28796047,28794558 28800599,28799153,28797205,28795732 Gene ID= ENSG00000100219.16 TPM= 6.34 Transcript Type= NA chr22 28794555 28800597 28794555 28800597 - ENST00000216037.10@XBP1 ENST00000216037.10 protein_coding 28800298,28799057,28797077,28796047,28794555 28800597,28799153,28797205,28796192,28795732 Gene ID= ENSG00000100219.16 TPM= 237.25 Transcript Type= protein_coding chr22 28794557 28800558 28794557 28800558 - ENST00000403532.7@XBP1 ENST00000403532.7 protein_coding 28800298,28799042,28797077,28796047,28794557 28800558,28799153,28797205,28796192,28795732 Gene ID= ENSG00000100219.16 TPM= 1.81 Transcript Type= protein_coding chr22 28883592 29057487 28883592 29057487 + ENST00000544604.6@ZNRF3 ENST00000544604.6 protein_coding 28883592,28987076,29042495,29043299,29044780,29046716,29048389,29049197,29053579 28884066,28987201,29042569,29043430,29044890,29046883,29048491,29050948,29057487 Gene ID= ENSG00000183579.15 TPM= 19.02 Transcript Type= protein_coding chr22 29073036 29146819 29073036 29146819 + transcript894.chr22.nic@KREMEN1 transcript894.chr22.nic protein_coding 29073036,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944 29073227,29094420,29098953,29121481,29125416,29137674,29138833,29140366,29146819 Gene ID= ENSG00000183762.12 TPM= 3.62 Transcript Type= NA chr22 29073048 29146819 29073048 29146819 + transcript895.chr22.nic@KREMEN1 transcript895.chr22.nic protein_coding 29073048,29094258,29098862,29121357,29125263,29137502,29138624,29140282,29141944 29073227,29094420,29098953,29121481,29125416,29137674,29138782,29140366,29146819 Gene ID= ENSG00000183762.12 TPM= 1.81 Transcript Type= NA chr22 29073078 29146820 29073078 29146820 + ENST00000400335.8@KREMEN1 ENST00000400335.8 protein_coding 29073078,29094258,29098862,29121357,29125263,29137342,29138624,29140282,29141944 29073227,29094420,29098953,29121481,29125416,29137674,29138782,29140366,29146820 Gene ID= ENSG00000183762.12 TPM= 43.47 Transcript Type= protein_coding chr22 29205821 29259598 29205821 29259598 + transcript913.chr22.nic@EMID1 transcript913.chr22.nic protein_coding 29205821,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29255271,29258817 29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29255361,29259598 Gene ID= ENSG00000186998.15 TPM= 20.33 Transcript Type= NA chr22 29205907 29259598 29205907 29259598 + transcript938.chr22.nic@EMID1 transcript938.chr22.nic protein_coding 29205907,29214926,29215527,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29258817 29206139,29215039,29215630,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29259598 Gene ID= ENSG00000186998.15 TPM= 13.99 Transcript Type= NA chr22 29180271 29205923 29180271 29205923 + transcript961.chr22.nnic@EMID1 transcript961.chr22.nnic protein_coding 29180271,29183172,29184970,29186197,29205160,29205471 29180663,29183381,29185199,29186265,29205321,29205923 Gene ID= ENSG00000186998.15 TPM= 1.81 Transcript Type= NA chr22 29178739 29205807 29178739 29205807 + transcript962.chr22.nnic@EMID1 transcript962.chr22.nnic protein_coding 29178739,29181703,29183172,29186197,29205160,29205471 29180663,29181847,29183381,29186265,29205321,29205807 Gene ID= ENSG00000186998.15 TPM= 1.81 Transcript Type= NA chr22 29178730 29205911 29178730 29205911 + transcript965.chr22.nnic@EMID1 transcript965.chr22.nnic protein_coding 29178730,29183172,29186197,29205160,29205471 29180663,29183381,29186265,29205321,29205911 Gene ID= ENSG00000186998.15 TPM= 1.81 Transcript Type= NA chr22 29178730 29206026 29178730 29206026 + transcript970.chr22.nnic@EMID1 transcript970.chr22.nnic protein_coding 29178730,29183172,29205160,29205471 29180663,29183381,29205321,29206026 Gene ID= ENSG00000186998.15 TPM= 3.62 Transcript Type= NA chr22 29205904 29216619 29205904 29216619 + transcript971.chr22.nnic@EMID1 transcript971.chr22.nnic protein_coding 29205904,29214926,29215527,29216323 29206139,29215039,29215630,29216619 Gene ID= ENSG00000186998.15 TPM= 7.24 Transcript Type= NA chr22 29178731 29205813 29178731 29205813 + transcript972.chr22.nnic@EMID1 transcript972.chr22.nnic protein_coding 29178731,29205160,29205471 29180667,29205321,29205813 Gene ID= ENSG00000186998.15 TPM= 3.62 Transcript Type= NA chr22 29205851 29259597 29205851 29259597 + ENST00000334018.10@EMID1 ENST00000334018.10 protein_coding 29205851,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29254203,29258817 29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29254287,29259597 Gene ID= ENSG00000186998.15 TPM= 129.9 Transcript Type= protein_coding chr22 29205912 29259597 29205912 29259597 + ENST00000404820.7@EMID1 ENST00000404820.7 protein_coding 29205912,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234137,29234305,29243445,29255271,29258817 29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234199,29234349,29243489,29255361,29259597 Gene ID= ENSG00000186998.15 TPM= 23.05 Transcript Type= protein_coding chr22 29205912 29259597 29205912 29259597 + ENST00000404755.7@EMID1 ENST00000404755.7 protein_coding 29205912,29214926,29215527,29225133,29226490,29231020,29231593,29232256,29233379,29233614,29234305,29243445,29254203,29258817 29206139,29215039,29215630,29225216,29226551,29231140,29231682,29232402,29233468,29233666,29234349,29243489,29254287,29259597 Gene ID= ENSG00000186998.15 TPM= 2.22 Transcript Type= protein_coding chr22 29259853 29268221 29259853 29268221 - transcript959.chr22.nic@RHBDD3 transcript959.chr22.nic protein_coding 29268089,29267426,29265479,29263835,29260702,29260326,29259853 29268221,29267577,29265668,29264218,29260864,29260613,29260237 Gene ID= ENSG00000100263.13 TPM= 2.72 Transcript Type= NA chr22 29259853 29268027 29259853 29268027 - transcript963.chr22.nic@RHBDD3 transcript963.chr22.nic protein_coding 29267748,29267426,29263835,29260702,29260326,29259853 29268027,29267577,29265668,29260864,29260613,29260237 Gene ID= ENSG00000100263.13 TPM= 36.67 Transcript Type= NA chr22 29259853 29267971 29259853 29267971 - transcript969.chr22.nic@RHBDD3 transcript969.chr22.nic protein_coding 29267748,29267426,29263835,29260326,29259853 29267971,29267577,29265668,29260864,29260237 Gene ID= ENSG00000100263.13 TPM= 5.89 Transcript Type= NA chr22 29259852 29267978 29259852 29267978 - ENST00000216085.11@RHBDD3 ENST00000216085.11 protein_coding 29267748,29267426,29265479,29263835,29260702,29260326,29259852 29267978,29267577,29265668,29264218,29260864,29260613,29260237 Gene ID= ENSG00000100263.13 TPM= 50.71 Transcript Type= protein_coding chr22 29268018 29300525 29268018 29300525 + ENST00000397938.6@EWSR1 ENST00000397938.6 protein_coding 29268018,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122 29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300525 Gene ID= ENSG00000182944.17 TPM= 96.03 Transcript Type= protein_coding chr22 29268256 29300527 29268256 29300527 + transcript919.chr22.nnic@EWSR1 transcript919.chr22.nnic protein_coding 29268256,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122 29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300527 Gene ID= ENSG00000182944.17 TPM= 24.49 Transcript Type= NA chr22 29268009 29300524 29268009 29300524 + ENST00000629659.2@EWSR1 ENST00000629659.2 protein_coding 29268009,29272216,29272380,29273738,29278030,29282390,29286923,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122 29268349,29272252,29272431,29273864,29278216,29282557,29287134,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300524 Gene ID= ENSG00000182944.17 TPM= 2.76 Transcript Type= protein_coding chr22 29268273 29300336 29268273 29300336 + ENST00000406548.5@EWSR1 ENST00000406548.5 protein_coding 29268273,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29291565,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122 29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336 Gene ID= ENSG00000182944.17 TPM= 49.53 Transcript Type= protein_coding chr22 29268291 29300525 29268291 29300525 + ENST00000331029.11@EWSR1 ENST00000331029.11 protein_coding 29268291,29272216,29272380,29273741,29278030,29282390,29286923,29288606,29292500,29296239,29297827,29298733,29299234,29299599,29300122 29268349,29272252,29272431,29273864,29278216,29282557,29287134,29288755,29292606,29296368,29297949,29298895,29299331,29299851,29300525 Gene ID= ENSG00000182944.17 TPM= 2.54 Transcript Type= protein_coding chr22 29268326 29300336 29268326 29300336 + ENST00000332035.10@EWSR1 ENST00000332035.10 protein_coding 29268326,29272216,29272380,29273741,29278030,29286923,29288606,29291562,29292137,29292488,29296239,29297827,29298733,29299234,29299599,29300122 29268349,29272252,29272431,29273864,29278216,29287134,29288786,29291599,29292169,29292606,29296368,29297949,29298895,29299331,29299851,29300336 Gene ID= ENSG00000182944.17 TPM= 2.44 Transcript Type= protein_coding chr22 29306582 29312785 29306582 29312785 + ENST00000616432.4@GAS2L1 ENST00000616432.4 protein_coding 29306582,29308087,29310439,29310638,29310827,29311462 29307153,29308738,29310546,29310734,29310998,29312785 Gene ID= ENSG00000185340.15 TPM= 94.67 Transcript Type= protein_coding chr22 29307028 29312786 29307028 29312786 + transcript976.chr22.nnic@GAS2L1 transcript976.chr22.nnic protein_coding 29307028,29308087,29310439,29310638,29310827,29311564 29307153,29308738,29310546,29310734,29310998,29312786 Gene ID= ENSG00000185340.15 TPM= 5.17 Transcript Type= NA chr22 29307009 29312785 29307009 29312785 + transcript978.chr22.nnic@GAS2L1 transcript978.chr22.nnic protein_coding 29307009,29308087,29310439,29310638,29310827,29311921 29307153,29308738,29310546,29310734,29310998,29312785 Gene ID= ENSG00000185340.15 TPM= 3.36 Transcript Type= NA chr22 29307021 29312786 29307021 29312786 + transcript979.chr22.nnic@GAS2L1 transcript979.chr22.nnic protein_coding 29307021,29308087,29310439,29310638,29310827,29311976 29307153,29308738,29310546,29310734,29310998,29312786 Gene ID= ENSG00000185340.15 TPM= 6.08 Transcript Type= NA chr22 29307020 29312789 29307020 29312789 + transcript980.chr22.nnic@GAS2L1 transcript980.chr22.nnic protein_coding 29307020,29308087,29310439,29310638,29310871,29311462 29307153,29308738,29310546,29310734,29310998,29312789 Gene ID= ENSG00000185340.15 TPM= 5.62 Transcript Type= NA chr22 29307058 29312785 29307058 29312785 + ENST00000618518.3@GAS2L1 ENST00000618518.3 protein_coding 29307058,29310439,29310638,29310827,29311462 29308738,29310546,29310734,29310998,29312785 Gene ID= ENSG00000185340.15 TPM= 8.65 Transcript Type= protein_coding chr22 29307052 29312785 29307052 29312785 + ENST00000621062.4@GAS2L1 ENST00000621062.4 protein_coding 29307052,29308059,29310439,29310638,29310827,29311462 29307153,29308738,29310546,29310734,29310998,29312785 Gene ID= ENSG00000185340.15 TPM= 6.84 Transcript Type= protein_coding chr22 29327682 29388583 29327682 29388583 - ENST00000432560.6@AP1B1 ENST00000432560.6 protein_coding 29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327682 29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339133,29334410,29331916,29331533,29330709,29330532,29328895 Gene ID= ENSG00000100280.16 TPM= 220.2 Transcript Type= protein_coding chr22 29327865 29388583 29327865 29388583 - ENST00000317368.11@AP1B1 ENST00000317368.11 protein_coding 29388424,29367207,29363001,29359824,29358726,29356426,29354650,29351705,29351171,29350035,29349218,29342285,29341501,29340656,29338990,29334265,29331787,29331449,29330623,29330378,29327865 29388583,29367270,29363106,29359959,29358971,29356616,29354871,29351825,29351266,29350150,29349383,29342383,29341760,29340857,29339133,29334350,29331916,29331533,29330709,29330532,29328895 Gene ID= ENSG00000100280.16 TPM= 8.6 Transcript Type= protein_coding chr22 29508330 29553768 29508330 29553768 - transcript1008.chr22.nic@THOC5 transcript1008.chr22.nic protein_coding 29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29531078,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508330 29553768,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29531110,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520 Gene ID= ENSG00000100296.13 TPM= 5.43 Transcript Type= NA chr22 29508168 29553655 29508168 29553655 - ENST00000397872.5@THOC5 ENST00000397872.5 protein_coding 29553448,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168 29553655,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520 Gene ID= ENSG00000100296.13 TPM= 3.92 Transcript Type= protein_coding chr22 29508168 29553655 29508168 29553655 - ENST00000397871.5@THOC5 ENST00000397871.5 protein_coding 29553448,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508168 29553655,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520 Gene ID= ENSG00000100296.13 TPM= 2.11 Transcript Type= protein_coding chr22 29505879 29553782 29505879 29553782 - ENST00000490103.5@THOC5 ENST00000490103.5 protein_coding 29553671,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29505879 29553782,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520 Gene ID= ENSG00000100296.13 TPM= 24.75 Transcript Type= protein_coding chr22 29508358 29553766 29508358 29553766 - ENST00000397873.6@THOC5 ENST00000397873.6 protein_coding 29553671,29550728,29549052,29544460,29543429,29542859,29539330,29536624,29531831,29529162,29528426,29528078,29525838,29520998,29520008,29519006,29517263,29517029,29512021,29511106,29508358 29553766,29550843,29549158,29544603,29543542,29542956,29539476,29536738,29531963,29529239,29528466,29528177,29525946,29521099,29520104,29519120,29517366,29517116,29512136,29511296,29508520 Gene ID= ENSG00000100296.13 TPM= 4.53 Transcript Type= protein_coding chr22 29554808 29581337 29554808 29581337 - ENST00000216121.11@NIPSNAP1 ENST00000216121.11 protein_coding 29580985,29570405,29570162,29569193,29561792,29561506,29561171,29560734,29558870,29554808 29581337,29570532,29570207,29569287,29561862,29561646,29561202,29560828,29558953,29555999 Gene ID= ENSG00000184117.11 TPM= 208.73 Transcript Type= protein_coding chr22 29603558 29698598 29603558 29698598 + ENST00000338641.8@NF2 ENST00000338641.8 protein_coding 29603558,29636751,29639090,29642202,29654657,29655594,29658189,29661205,29664990,29668333,29671826,29673269,29674836,29678196,29681439,29694752 29604112,29636876,29639212,29642285,29654725,29655676,29658264,29661339,29665064,29668446,29671948,29673486,29674941,29678323,29681601,29698598 Gene ID= ENSG00000186575.17 TPM= 87.84 Transcript Type= protein_coding chr22 29719967 29731829 29719967 29731829 + transcript1041.chr22.nic@CABP7 transcript1041.chr22.nic protein_coding 29719967,29727662,29728630,29729442 29720533,29727805,29729208,29731829 Gene ID= ENSG00000100314.3 TPM= 4.53 Transcript Type= NA chr22 29720084 29731839 29720084 29731839 + ENST00000216144.3@CABP7 ENST00000216144.3 protein_coding 29720084,29727662,29728630,29729055,29729442 29720533,29727805,29728742,29729208,29731839 Gene ID= ENSG00000100314.3 TPM= 17.21 Transcript Type= protein_coding chr22 29730957 29766963 29730957 29766963 - transcript1032.chr22.nnic@ZMAT5 transcript1032.chr22.nnic protein_coding 29766872,29754749,29748418,29742418,29740650,29738330,29730957 29766963,29754863,29748571,29742480,29740730,29738441,29731354 Gene ID= ENSG00000100319.12 TPM= 1.81 Transcript Type= NA chr22 29730957 29766994 29730957 29766994 - transcript1033.chr22.nnic@ZMAT5 transcript1033.chr22.nnic protein_coding 29766949,29754749,29748418,29742418,29740650,29738330,29730957 29766994,29754863,29748571,29742480,29740730,29738441,29731354 Gene ID= ENSG00000100319.12 TPM= 4.53 Transcript Type= NA chr22 29730957 29767004 29730957 29767004 - transcript1038.chr22.nic@ZMAT5 transcript1038.chr22.nic protein_coding 29766949,29748418,29742418,29740650,29738330,29730957 29767004,29748571,29742480,29740730,29738441,29731354 Gene ID= ENSG00000100319.12 TPM= 11.77 Transcript Type= NA chr22 29730956 29766961 29730956 29766961 - ENST00000344318.3@ZMAT5 ENST00000344318.3 protein_coding 29766872,29748418,29742418,29740650,29738330,29730956 29766961,29748571,29742480,29740730,29738441,29731354 Gene ID= ENSG00000100319.12 TPM= 19.92 Transcript Type= protein_coding chr22 29767369 29770413 29767369 29770413 + ENST00000330029.6@UQCR10 ENST00000330029.6 protein_coding 29767369,29769678 29767548,29770413 Gene ID= ENSG00000184076.13 TPM= 435.57 Transcript Type= protein_coding chr22 29788609 29838286 29788609 29838286 - transcript1050.chr22.nic@ASCC2 transcript1050.chr22.nic protein_coding 29838178,29834489,29833541,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788609 29838286,29834550,29833614,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184 Gene ID= ENSG00000100325.14 TPM= 7.08 Transcript Type= NA chr22 29788609 29838286 29788609 29838286 - transcript1054.chr22.nic@ASCC2 transcript1054.chr22.nic protein_coding 29838178,29834442,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788609 29838286,29834550,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184 Gene ID= ENSG00000100325.14 TPM= 5.27 Transcript Type= NA chr22 29788609 29838280 29788609 29838280 - transcript1069.chr22.nnic@ASCC2 transcript1069.chr22.nnic protein_coding 29838178,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788609 29838280,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184 Gene ID= ENSG00000100325.14 TPM= 10.7 Transcript Type= NA chr22 29788609 29838302 29788609 29838302 - transcript1070.chr22.nic@ASCC2 transcript1070.chr22.nic protein_coding 29838178,29832245,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788609 29838302,29832342,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184 Gene ID= ENSG00000100325.14 TPM= 26.1 Transcript Type= NA chr22 29788642 29838276 29788642 29838276 - ENST00000397771.6@ASCC2 ENST00000397771.6 protein_coding 29838178,29834489,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788642 29838276,29834550,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184 Gene ID= ENSG00000100325.14 TPM= 47.09 Transcript Type= protein_coding chr22 29788608 29838274 29788608 29838274 - ENST00000307790.7@ASCC2 ENST00000307790.7 protein_coding 29838178,29832245,29825622,29825087,29822335,29816006,29814657,29813430,29808111,29806797,29806485,29806216,29804638,29801994,29800991,29793577,29793360,29792433,29790469,29788608 29838274,29832342,29825780,29825257,29822464,29816073,29814767,29813542,29808185,29806904,29806553,29806290,29804830,29802208,29801110,29793676,29793490,29792535,29790548,29789184 Gene ID= ENSG00000100325.14 TPM= 57.79 Transcript Type= protein_coding chr22 29883144 30030505 29883144 30030505 + transcript1080.chr22.nic@MTMR3 transcript1080.chr22.nic protein_coding 29883144,29957036,29970976,29978442,29978936,29988480,29991504,29998761,30002880,30007114,30007901,30009018,30012368,30013356,30016528,30017927,30019480,30022029,30022609,30023457,30025630 29883359,29957088,29971062,29978531,29979052,29988562,29991670,29998857,30002993,30007319,30008032,30009129,30012563,30013541,30016698,30018072,30020884,30022139,30022697,30023483,30030505 Gene ID= ENSG00000100330.15 TPM= 7.7 Transcript Type= NA chr22 29883155 30027880 29883155 30027880 + ENST00000401950.6@MTMR3 ENST00000401950.6 protein_coding 29883155,29957036,29970976,29978442,29978936,29988480,29991504,29998761,30002880,30007114,30007901,30009018,30012368,30013356,30016528,30017927,30019480,30022029,30022609,30025630 29883359,29957088,29971062,29978531,29979052,29988562,29991670,29998857,30002993,30007319,30008032,30009129,30012563,30013541,30016698,30018072,30020884,30022139,30022697,30027880 Gene ID= ENSG00000100330.15 TPM= 36.67 Transcript Type= protein_coding chr22 30262829 30266840 30262829 30266840 - ENST00000215781.2@OSM ENST00000215781.2 protein_coding 30266766,30265002,30262829 30266840,30265144,30264464 Gene ID= ENSG00000099985.3 TPM= 9.06 Transcript Type= protein_coding chr22 30285117 30289627 30285117 30289627 - ENST00000407689.7@CASTOR1 ENST00000407689.7 protein_coding 30289385,30288706,30287373,30287155,30286825,30286263,30286016,30285832,30285117 30289627,30288776,30287560,30287287,30286948,30286376,30286098,30285926,30285688 Gene ID= ENSG00000239282.7 TPM= 30.79 Transcript Type= protein_coding chr22 30285146 30289607 30285146 30289607 - ENST00000404953.7@CASTOR1 ENST00000404953.7 protein_coding 30289385,30288706,30287373,30287155,30286825,30286016,30285832,30285146 30289607,30288776,30287560,30287287,30286948,30286098,30285926,30285688 Gene ID= ENSG00000239282.7 TPM= 3.62 Transcript Type= protein_coding chr22 30291991 30326958 30291991 30326958 - transcript1089.chr22.nic@TBC1D10A transcript1089.chr22.nic protein_coding 30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30293159,30291991 30326958,30304630,30299551,30295843,30295055,30294861,30294110,30293805,30293319,30292851 Gene ID= ENSG00000099992.15 TPM= 3.17 Transcript Type= NA chr22 30291990 30327046 30291990 30327046 - ENST00000215790.11@TBC1D10A ENST00000215790.11 protein_coding 30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291990 30327046,30304630,30299551,30295843,30295055,30294861,30294110,30293805,30292851 Gene ID= ENSG00000099992.15 TPM= 52.52 Transcript Type= protein_coding chr22 30291993 30326901 30291993 30326901 - ENST00000403477.7@TBC1D10A ENST00000403477.7 protein_coding 30326673,30304531,30299444,30295737,30294941,30294796,30293921,30293651,30291993 30326901,30304651,30299551,30295843,30295055,30294861,30294110,30293805,30292851 Gene ID= ENSG00000099992.15 TPM= 1.81 Transcript Type= protein_coding chr22 30291990 30326958 30291990 30326958 - transcript1103.chr22.nic@TBC1D10A transcript1103.chr22.nic protein_coding 30326673,30304531,30299444,30295737,30294941,30294796,30293921,30291990 30326958,30304630,30299551,30295843,30295055,30294861,30294110,30293805 Gene ID= ENSG00000099992.15 TPM= 6.79 Transcript Type= NA chr22 30331988 30356947 30331988 30356947 - ENST00000215793.12@SF3A1 ENST00000215793.12 protein_coding 30356730,30352951,30346312,30344933,30342805,30342200,30341692,30340695,30340196,30339130,30338789,30337690,30337026,30335652,30335467,30331988 30356947,30353072,30346519,30345190,30342879,30342350,30341885,30340812,30340381,30339251,30339034,30337897,30337180,30335753,30335538,30334695 Gene ID= ENSG00000099995.18 TPM= 42.56 Transcript Type= protein_coding chr22 30356638 30376827 30356638 30376827 + ENST00000338306.7@CCDC157 ENST00000338306.7 protein_coding 30356638,30361961,30365990,30369432,30370326,30371650,30372075,30373597,30373923,30375479,30376259,30376433 30357132,30362114,30366248,30369603,30370950,30371727,30372286,30373764,30374091,30375663,30376347,30376827 Gene ID= ENSG00000187860.10 TPM= 2.72 Transcript Type= protein_coding chr22 30378817 30387388 30378817 30387388 - ENST00000382363.7@RNF215 ENST00000382363.7 protein_coding 30387029,30386616,30386070,30385904,30384339,30380282,30380062,30379711,30378817 30387388,30386759,30386141,30385989,30384495,30380401,30380205,30379813,30379622 Gene ID= ENSG00000099999.14 TPM= 9.96 Transcript Type= protein_coding chr22 30396857 30425317 30396857 30425317 + ENST00000615189.4@SEC14L2 ENST00000615189.4 protein_coding 30396857,30399643,30406342,30407095,30407415,30409187,30409426,30410596,30415759,30415948,30416234,30422277 30397170,30399718,30406385,30407154,30407603,30409282,30409486,30410679,30415865,30416087,30416403,30425317 Gene ID= ENSG00000100003.17 TPM= 2.72 Transcript Type= protein_coding chr22 30425530 30429053 30425530 30429053 + ENST00000266263.9@MTFP1 ENST00000266263.9 protein_coding 30425530,30426717,30427171,30428462 30425946,30426844,30427403,30429053 Gene ID= ENSG00000242114.5 TPM= 15.39 Transcript Type= protein_coding chr22 30488913 30505695 30488913 30505695 - ENST00000255858.11@SEC14L4 ENST00000255858.11 protein_coding 30505558,30503677,30495928,30495583,30495254,30494866,30494150,30492474,30492049,30491834,30491573,30488913 30505695,30503752,30495971,30495642,30495442,30494961,30494210,30492557,30492155,30491973,30491742,30490246 Gene ID= ENSG00000133488.14 TPM= 1.81 Transcript Type= protein_coding chr22 30522799 30542654 30522799 30542654 - transcript1127.chr22.nnic@SEC14L6 transcript1127.chr22.nnic protein_coding 30542156,30538827,30533996,30532797,30532525,30531903,30529289,30529087,30525826,30525611,30524997,30522799 30542654,30538902,30534039,30532856,30532713,30531998,30529349,30529170,30525932,30525750,30525109,30523718 Gene ID= ENSG00000214491.8 TPM= 1.81 Transcript Type= NA chr22 30522793 30542654 30522793 30542654 - transcript1130.chr22.nnic@SEC14L6 transcript1130.chr22.nnic protein_coding 30542156,30538827,30533996,30532797,30532180,30529289,30529087,30525826,30525611,30522793 30542654,30538902,30534039,30532856,30532713,30529349,30529170,30525932,30525750,30525109 Gene ID= ENSG00000214491.8 TPM= 1.81 Transcript Type= NA chr22 30522793 30542654 30522793 30542654 - transcript1131.chr22.nnic@SEC14L6 transcript1131.chr22.nnic protein_coding 30542156,30538827,30533996,30532797,30532525,30529289,30529087,30525826,30525611,30522793 30542654,30538902,30534039,30532856,30532713,30529349,30529170,30525932,30525750,30525109 Gene ID= ENSG00000214491.8 TPM= 1.81 Transcript Type= NA chr22 30576625 30591940 30576625 30591940 - ENST00000354694.11@PES1 ENST00000354694.11 protein_coding 30591810,30589191,30588021,30587286,30584546,30584365,30581528,30581334,30581012,30580571,30580053,30579751,30579137,30578837,30576625 30591940,30589270,30588174,30587395,30584717,30584454,30581644,30581408,30581101,30580701,30580178,30579935,30579303,30578998,30577129 Gene ID= ENSG00000100029.17 TPM= 28.07 Transcript Type= protein_coding chr22 30607191 30630708 30607191 30630708 + transcript1138.chr22.nnic@TCN2 transcript1138.chr22.nnic protein_coding 30607191,30610871,30612873,30614349,30615301,30615601,30617330,30622968,30626460,30628811 30607395,30611063,30613042,30614501,30615473,30615787,30617495,30623083,30628778,30630708 Gene ID= ENSG00000185339.8 TPM= 3.32 Transcript Type= NA chr22 30606794 30627615 30606794 30627615 + transcript1141.chr22.nnic@TCN2 transcript1141.chr22.nnic protein_coding 30606794,30610871,30612873,30614349,30615301,30615601,30617330,30626460 30607395,30611063,30613042,30614501,30615473,30615787,30617495,30627615 Gene ID= ENSG00000185339.8 TPM= 3.32 Transcript Type= NA chr22 30606838 30627278 30606838 30627278 + ENST00000215838.7@TCN2 ENST00000215838.7 protein_coding 30606838,30610871,30612873,30614349,30615301,30615601,30617330,30622968,30626460 30607395,30611063,30613042,30614501,30615473,30615787,30617495,30623083,30627278 Gene ID= ENSG00000185339.8 TPM= 125.26 Transcript Type= protein_coding chr22 30607204 30627060 30607204 30627060 + ENST00000407817.3@TCN2 ENST00000407817.3 protein_coding 30607204,30610871,30612873,30614349,30615301,30615601,30617330,30622968,30626460 30607395,30611063,30612961,30614501,30615473,30615787,30617495,30623083,30627060 Gene ID= ENSG00000185339.8 TPM= 2.11 Transcript Type= protein_coding chr22 30635652 30647893 30635652 30647893 + ENST00000343605.4@SLC35E4 ENST00000343605.4 protein_coding 30635652,30646598 30637069,30647893 Gene ID= ENSG00000100036.12 TPM= 27.17 Transcript Type= protein_coding chr22 30694273 30907825 30694273 30907825 + transcript1150.chr22.nnic@OSBP2 transcript1150.chr22.nnic protein_coding 30694273,30695376,30741161,30870429,30887426,30888223,30889177,30889490,30890728,30893122,30893463,30893638,30893817,30905837,30906197 30694344,30695553,30741369,30870682,30887618,30888340,30889234,30889636,30890973,30893242,30893566,30893733,30894001,30906069,30907825 Gene ID= ENSG00000184792.15 TPM= 10.71 Transcript Type= NA chr22 30694806 30907824 30694806 30907824 + ENST00000332585.10@OSBP2 ENST00000332585.10 protein_coding 30694806,30741161,30870429,30887426,30888223,30889177,30889490,30890728,30893122,30893463,30893638,30893817,30905837,30906197 30695553,30741369,30870682,30887618,30888340,30889234,30889636,30890973,30893242,30893566,30893733,30894001,30906069,30907824 Gene ID= ENSG00000184792.15 TPM= 47.84 Transcript Type= protein_coding chr22 30694852 30907825 30694852 30907825 + transcript1156.chr22.nnic@OSBP2 transcript1156.chr22.nnic protein_coding 30694852,30741161,30870429,30887426,30888223,30889177,30890728,30893122,30893463,30893638,30893817,30905837,30906197 30695553,30741369,30870682,30887618,30888340,30889234,30890973,30893242,30893566,30893733,30894001,30906069,30907825 Gene ID= ENSG00000184792.15 TPM= 7.54 Transcript Type= NA chr22 30922308 30926550 30922308 30926550 + ENST00000432624.2@MORC2-AS1 ENST00000432624.2 antisense_RNA 30922308,30924729 30922515,30926550 Gene ID= ENSG00000235989.3 TPM= 1.81 Transcript Type= antisense_RNA chr22 30969479 30978848 30969479 30978848 + transcript1170.chr22.nic@TUG1 transcript1170.chr22.nic antisense_RNA 30969479,30972924,30975170 30971779,30973587,30978848 Gene ID= ENSG00000253352.8 TPM= 6.34 Transcript Type= NA chr22 31081315 31104625 31081315 31104625 + transcript1174.chr22.nic@SMTN transcript1174.chr22.nic protein_coding 31081315,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31093784,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316 31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31093876,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104625 Gene ID= ENSG00000183963.18 TPM= 3.85 Transcript Type= NA chr22 31081315 31104625 31081315 31104625 + transcript1177.chr22.nic@SMTN transcript1177.chr22.nic protein_coding 31081315,31083179,31087965,31088454,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316 31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104625 Gene ID= ENSG00000183963.18 TPM= 7.62 Transcript Type= NA chr22 31081319 31104624 31081319 31104624 + ENST00000333137.11@SMTN ENST00000333137.11 protein_coding 31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31100885,31104316 31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31101049,31104624 Gene ID= ENSG00000183963.18 TPM= 115.84 Transcript Type= protein_coding chr22 31081319 31104624 31081319 31104624 + ENST00000347557.6@SMTN ENST00000347557.6 protein_coding 31081319,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31099745,31104316 31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099179,31099896,31104624 Gene ID= ENSG00000183963.18 TPM= 4.75 Transcript Type= protein_coding chr22 31081315 31104625 31081315 31104625 + transcript1184.chr22.nic@SMTN transcript1184.chr22.nic protein_coding 31081315,31083179,31087965,31088513,31088699,31088872,31089699,31090108,31090808,31090961,31091675,31095303,31095534,31096733,31096998,31097269,31098667,31099062,31100885,31104316 31081456,31083309,31088113,31088606,31088777,31088969,31090019,31090180,31090879,31091482,31091847,31095455,31095609,31096897,31097060,31097338,31098840,31099896,31101049,31104625 Gene ID= ENSG00000183963.18 TPM= 4.3 Transcript Type= NA chr22 31104777 31107568 31104777 31107568 - ENST00000400299.6@SELENOM ENST00000400299.6 protein_coding 31107377,31105930,31105658,31105208,31104777 31107568,31105965,31105692,31105286,31105128 Gene ID= ENSG00000198832.10 TPM= 123.15 Transcript Type= protein_coding chr22 31160190 31207018 31160190 31207018 + transcript1197.chr22.nic@RNF185 transcript1197.chr22.nic protein_coding 31160190,31182969,31187047,31192684,31195469,31196936,31201498,31204489 31160303,31183066,31187270,31192702,31195581,31196990,31201615,31207018 Gene ID= ENSG00000138942.15 TPM= 3.44 Transcript Type= NA chr22 31160191 31207018 31160191 31207018 + transcript1199.chr22.nnic@RNF185 transcript1199.chr22.nnic protein_coding 31160191,31176262,31187047,31192684,31195469,31196936,31201498,31204489 31160303,31176417,31187270,31192702,31195581,31196990,31201615,31207018 Gene ID= ENSG00000138942.15 TPM= 3.44 Transcript Type= NA chr22 31160157 31207018 31160157 31207018 + transcript1202.chr22.nic@RNF185 transcript1202.chr22.nic protein_coding 31160157,31187047,31192684,31196936,31201498,31204489 31160303,31187270,31192702,31196990,31201615,31207018 Gene ID= ENSG00000138942.15 TPM= 3.44 Transcript Type= NA chr22 31160179 31207018 31160179 31207018 + transcript1203.chr22.nic@RNF185 transcript1203.chr22.nic protein_coding 31160179,31192684,31195469,31196936,31201498,31204489 31160303,31192702,31195581,31196990,31201615,31207018 Gene ID= ENSG00000138942.15 TPM= 5.25 Transcript Type= NA chr22 31160193 31207019 31160193 31207019 + ENST00000326132.10@RNF185 ENST00000326132.10 protein_coding 31160193,31187047,31192684,31195469,31196936,31201498,31204489 31160303,31187270,31192702,31195581,31196990,31201615,31207019 Gene ID= ENSG00000138942.15 TPM= 37.85 Transcript Type= protein_coding chr22 31212250 31277637 31212250 31277637 + transcript1208.chr22.nic@LIMK2 transcript1208.chr22.nic protein_coding 31212250,31225720,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31276789 31212424,31225819,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31277637 Gene ID= ENSG00000182541.17 TPM= 5.43 Transcript Type= NA chr22 31248334 31275669 31248334 31275669 + transcript1215.chr22.nic@LIMK2 transcript1215.chr22.nic protein_coding 31248334,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151 31248769,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275669 Gene ID= ENSG00000182541.17 TPM= 1.81 Transcript Type= NA chr22 31212295 31280080 31212295 31280080 + ENST00000331728.8@LIMK2 ENST00000331728.8 protein_coding 31212295,31225720,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297 31212424,31225819,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31280080 Gene ID= ENSG00000182541.17 TPM= 23.09 Transcript Type= protein_coding chr22 31248402 31279734 31248402 31279734 + ENST00000333611.8@LIMK2 ENST00000333611.8 protein_coding 31248402,31258291,31259121,31259889,31262134,31262595,31265946,31266984,31267776,31268144,31271136,31272530,31273452,31275151,31278297 31248769,31258426,31259230,31260077,31262239,31262791,31266132,31267070,31267907,31268200,31271201,31272704,31273507,31275308,31279734 Gene ID= ENSG00000182541.17 TPM= 4.98 Transcript Type= protein_coding chr22 31281593 31292528 31281593 31292528 - ENST00000215912.9@PIK3IP1 ENST00000215912.9 protein_coding 31292275,31291180,31290965,31289499,31289315,31281593 31292528,31291296,31291084,31289699,31289393,31283288 Gene ID= ENSG00000100100.12 TPM= 276.64 Transcript Type= protein_coding chr22 31281613 31292534 31281613 31292534 - ENST00000441972.5@PIK3IP1 ENST00000441972.5 protein_coding 31292275,31291180,31290965,31289499,31281613 31292534,31291296,31291084,31289699,31283288 Gene ID= ENSG00000100100.12 TPM= 12.22 Transcript Type= protein_coding chr22 31325809 31346232 31325809 31346232 - ENST00000405309.7@PATZ1 ENST00000405309.7 protein_coding 31344332,31342897,31335692,31328787,31325809 31346232,31342960,31335863,31328859,31327309 Gene ID= ENSG00000100105.17 TPM= 3.62 Transcript Type= protein_coding chr22 31454059 31489808 31454059 31489808 - transcript1237.chr22.nic@EIF4ENIF1 transcript1237.chr22.nic protein_coding 31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454059 31489808,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376 Gene ID= ENSG00000184708.17 TPM= 1.81 Transcript Type= NA chr22 31439369 31489741 31439369 31489741 - ENST00000330125.9@EIF4ENIF1 ENST00000330125.9 protein_coding 31489694,31488623,31471844,31468175,31463681,31462932,31458475,31455852,31455136,31454144,31450289,31449348,31448153,31447426,31444606,31442962,31441774,31440704,31439369 31489741,31488745,31471917,31468302,31463967,31463133,31458650,31455987,31455315,31454376,31450360,31449531,31448232,31447565,31444690,31443094,31442118,31440868,31440121 Gene ID= ENSG00000184708.17 TPM= 14.49 Transcript Type= protein_coding chr22 31496139 31618558 31496139 31618558 + transcript1243.chr22.nic@SFI1 transcript1243.chr22.nic protein_coding 31496139,31508255,31528690,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314 31496637,31508376,31528863,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618558 Gene ID= ENSG00000198089.15 TPM= 9.72 Transcript Type= NA chr22 31496139 31618558 31496139 31618558 + transcript1244.chr22.nnic@SFI1 transcript1244.chr22.nnic protein_coding 31496139,31508255,31528690,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31615048,31616745,31617000,31618115,31618314 31496637,31508376,31528863,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31615279,31616877,31617078,31618226,31618558 Gene ID= ENSG00000198089.15 TPM= 3.62 Transcript Type= NA chr22 31496494 31618558 31496494 31618558 + transcript1249.chr22.nic@SFI1 transcript1249.chr22.nic protein_coding 31496494,31508255,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314 31496637,31508376,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618558 Gene ID= ENSG00000198089.15 TPM= 2.63 Transcript Type= NA chr22 31496139 31618551 31496139 31618551 + ENST00000540643.5@SFI1 ENST00000540643.5 protein_coding 31496139,31508255,31528690,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314 31496637,31508376,31528863,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618551 Gene ID= ENSG00000198089.15 TPM= 8.06 Transcript Type= protein_coding chr22 31496538 31618548 31496538 31618548 + ENST00000400289.5@SFI1 ENST00000400289.5 protein_coding 31496538,31508259,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314 31496637,31508376,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618548 Gene ID= ENSG00000198089.15 TPM= 4.28 Transcript Type= protein_coding chr22 31496563 31618586 31496563 31618586 + ENST00000400288.6@SFI1 ENST00000400288.6 protein_coding 31496563,31508255,31528690,31531058,31546861,31550254,31556942,31561290,31573058,31575231,31578382,31580272,31583875,31585068,31589447,31602212,31602607,31603744,31604309,31604869,31606328,31607937,31611143,31611766,31613142,31613354,31613602,31614789,31615048,31616745,31617000,31618115,31618314 31496637,31508376,31528863,31531129,31546971,31550348,31557059,31561392,31573214,31575392,31578452,31580364,31583972,31585134,31589577,31602293,31602785,31603819,31604404,31604945,31606430,31608033,31611303,31611840,31613216,31613530,31613855,31614860,31615279,31616877,31617078,31618226,31618586 Gene ID= ENSG00000198089.15 TPM= 3.38 Transcript Type= protein_coding chr22 31618515 31630824 31618515 31630824 - ENST00000266095.9@PISD ENST00000266095.9 protein_coding 31630804,31628003,31625763,31623684,31621649,31621334,31620996,31620553,31618515 31630824,31628210,31626016,31623849,31621885,31621472,31621142,31620713,31619836 Gene ID= ENSG00000241878.11 TPM= 2.48 Transcript Type= protein_coding chr22 31618515 31630856 31618515 31630856 - transcript1260.chr22.nnic@PISD transcript1260.chr22.nnic protein_coding 31630804,31628853,31625763,31623684,31621649,31621334,31620996,31620553,31618515 31630856,31628981,31626016,31623849,31621885,31621472,31621142,31620713,31619836 Gene ID= ENSG00000241878.11 TPM= 4.29 Transcript Type= NA chr22 31618515 31630877 31618515 31630877 - transcript1267.chr22.nic@PISD transcript1267.chr22.nic protein_coding 31630804,31625763,31623684,31621649,31621334,31620996,31620553,31618515 31630877,31626016,31623849,31621885,31621472,31621142,31620713,31619836 Gene ID= ENSG00000241878.11 TPM= 26.03 Transcript Type= NA chr22 31618515 31630877 31618515 31630877 - transcript1272.chr22.nic@PISD transcript1272.chr22.nic protein_coding 31630804,31625763,31623684,31621334,31620996,31620553,31618515 31630877,31626016,31623849,31621885,31621142,31620713,31619836 Gene ID= ENSG00000241878.11 TPM= 3.88 Transcript Type= NA chr22 31618515 31662244 31618515 31662244 - transcript1274.chr22.nic@PISD transcript1274.chr22.nic protein_coding 31662144,31650699,31648101,31621649,31620996,31620553,31618515 31662244,31650778,31648276,31621885,31621472,31620713,31619836 Gene ID= ENSG00000241878.11 TPM= 6.6 Transcript Type= NA chr22 31681347 31750131 31681347 31750131 - ENST00000327423.10@PRR14L ENST00000327423.10 protein_coding 31749993,31738387,31725538,31712083,31704655,31703550,31701656,31688156,31681347 31750131,31738911,31725610,31717291,31704726,31703721,31701762,31688227,31685803 Gene ID= ENSG00000183530.13 TPM= 5.43 Transcript Type= protein_coding chr22 31754023 31907034 31754023 31907034 + ENST00000400249.6@DEPDC5 ENST00000400249.6 protein_coding 31754023,31754862,31758546,31760656,31764975,31766585,31768814,31778099,31783907,31784814,31792033,31792745,31797600,31798582,31802704,31804162,31804842,31806122,31809611,31810521,31814992,31819022,31821502,31822693,31833915,31836999,31838685,31843095,31843645,31845018,31846834,31857445,31870590,31873255,31874273,31876157,31879525,31893582,31897482,31901742,31905984,31906205 31754164,31754979,31758633,31760702,31765060,31766668,31768863,31778168,31783985,31784875,31792102,31792817,31797703,31798656,31802838,31804223,31804915,31806191,31809647,31810641,31815212,31819225,31821637,31822790,31833980,31837155,31838845,31843212,31843812,31845237,31846967,31857553,31870744,31873332,31874405,31876265,31879752,31893751,31897653,31901802,31906066,31907034 Gene ID= ENSG00000100150.16 TPM= 7.24 Transcript Type= protein_coding chr22 31754019 31784787 31754019 31784787 + transcript1288.chr22.nic@DEPDC5 transcript1288.chr22.nic protein_coding 31754019,31754862,31758546,31760656,31764975,31766585,31768814,31778099,31783907 31754164,31754979,31758633,31760702,31765060,31766668,31768863,31778168,31784787 Gene ID= ENSG00000100150.16 TPM= 1.81 Transcript Type= NA chr22 31944461 31957603 31944461 31957603 + ENST00000248975.5@YWHAH ENST00000248975.5 protein_coding 31944461,31956139 31944820,31957603 Gene ID= ENSG00000128245.14 TPM= 207.37 Transcript Type= protein_coding chr22 31944966 31957603 31944966 31957603 + ENST00000471374.1@YWHAH ENST00000471374.1 protein_coding 31944966,31956139 31945235,31957603 Gene ID= ENSG00000128245.14 TPM= 9.96 Transcript Type= processed_transcript chr22 32387582 32412255 32387582 32412255 - ENST00000216038.5@RTCB ENST00000216038.5 protein_coding 32412064,32408755,32408175,32406662,32401747,32399603,32397941,32396074,32395026,32393892,32392240,32387582 32412255,32408833,32408242,32406761,32401903,32399759,32398100,32396249,32395214,32394002,32392359,32388099 Gene ID= ENSG00000100220.11 TPM= 202.84 Transcript Type= protein_coding chr22 32474676 32498829 32474676 32498829 + ENST00000266087.11@FBXO7 ENST00000266087.11 protein_coding 32474676,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144 32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829 Gene ID= ENSG00000100225.17 TPM= 141.7 Transcript Type= protein_coding chr22 32474676 32498829 32474676 32498829 + ENST00000420700.5@FBXO7 ENST00000420700.5 protein_coding 32474676,32483897,32485068,32487745,32491086,32493105,32495493,32498144 32475124,32484124,32485209,32487828,32491181,32493281,32495530,32498829 Gene ID= ENSG00000100225.17 TPM= 8.28 Transcript Type= nonsense_mediated_decay chr22 32474798 32498829 32474798 32498829 + ENST00000425028.5@FBXO7 ENST00000425028.5 protein_coding 32474798,32479133,32483897,32485068,32487745,32491086,32493105,32495493,32498144 32475124,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829 Gene ID= ENSG00000100225.17 TPM= 17.64 Transcript Type= nonsense_mediated_decay chr22 32475257 32498829 32475257 32498829 + ENST00000397426.5@FBXO7 ENST00000397426.5 protein_coding 32475257,32478981,32483897,32485068,32487745,32491086,32493105,32495493,32498144 32475398,32479275,32484124,32485209,32487828,32491181,32493281,32495530,32498829 Gene ID= ENSG00000100225.17 TPM= 70.16 Transcript Type= protein_coding chr22 32801701 32863043 32801701 32863043 + ENST00000266085.6@TIMP3 ENST00000266085.6 protein_coding 32801701,32849452,32857249,32858017,32859180 32802122,32849534,32857360,32858138,32863043 Gene ID= ENSG00000100234.11 TPM= 1422.61 Transcript Type= protein_coding chr22 33276346 33921046 33276346 33921046 - transcript1341.chr22.nic@LARGE1 transcript1341.chr22.nic protein_coding 33919995,33761371,33650367,33626244,33604435,33564848,33432161,33384192,33381919,33337646,33316085,33304229,33283202,33276346 33921046,33761558,33650668,33626326,33604558,33565019,33432265,33384304,33382044,33337801,33316248,33304507,33283348,33277255 Gene ID= ENSG00000133424.20 TPM= 2.72 Transcript Type= NA chr22 35257487 35295806 35257487 35295806 + transcript1345.chr22.nic@HMGXB4 transcript1345.chr22.nic protein_coding 35257487,35263078,35263796,35263982,35264648,35283962,35285997,35287347,35288238,35292992,35293607 35257557,35263226,35263874,35264096,35265603,35284043,35286061,35287452,35288407,35293114,35295806 Gene ID= ENSG00000100281.13 TPM= 2.94 Transcript Type= NA chr22 35257423 35295806 35257423 35295806 + transcript1347.chr22.nic@HMGXB4 transcript1347.chr22.nic protein_coding 35257423,35263078,35263796,35264648,35283962,35285997,35287347,35288238,35292992,35293607 35257557,35263226,35263874,35265603,35284043,35286061,35287452,35288407,35293114,35295806 Gene ID= ENSG00000100281.13 TPM= 3.85 Transcript Type= NA chr22 35257452 35265570 35257452 35265570 + ENST00000420166.5@HMGXB4 ENST00000420166.5 protein_coding 35257452,35263078,35263796,35264648 35257557,35263226,35263874,35265570 Gene ID= ENSG00000100281.13 TPM= 2.72 Transcript Type= protein_coding chr22 35257487 35295807 35257487 35295807 + ENST00000418170.5@HMGXB4 ENST00000418170.5 protein_coding 35257487,35262323,35263078,35263796,35263982,35264648,35283962,35285997,35287347,35288238,35292992,35293607 35257557,35262421,35263226,35263874,35264096,35265603,35284043,35286061,35287452,35288407,35293114,35295807 Gene ID= ENSG00000100281.13 TPM= 10.19 Transcript Type= nonsense_mediated_decay chr22 35257498 35295764 35257498 35295764 + ENST00000216106.5@HMGXB4 ENST00000216106.5 protein_coding 35257498,35262323,35263078,35263796,35264648,35283962,35285997,35287347,35288238,35292992,35293607 35257557,35262421,35263226,35263874,35265603,35284043,35286061,35287452,35288407,35293114,35295764 Gene ID= ENSG00000100281.13 TPM= 4.75 Transcript Type= protein_coding chr22 35299804 35347994 35299804 35347994 + ENST00000449058.6@TOM1 ENST00000449058.6 protein_coding 35299804,35317877,35321959,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055 35299980,35317961,35322037,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347994 Gene ID= ENSG00000100284.20 TPM= 321.77 Transcript Type= protein_coding chr22 35299828 35347998 35299828 35347998 + transcript1358.chr22.nnic@TOM1 transcript1358.chr22.nnic protein_coding 35299828,35317877,35323028,35323496,35323768,35327271,35330347,35332981,35333404,35334328,35338713,35345725,35346930,35347055 35299980,35317961,35323177,35323630,35323914,35327387,35330480,35333014,35333497,35334448,35338788,35345784,35346969,35347998 Gene ID= ENSG00000100284.20 TPM= 25.65 Transcript Type= NA chr22 35380835 35394214 35380835 35394214 + ENST00000216117.8@HMOX1 ENST00000216117.8 protein_coding 35380835,35383106,35386685,35389864,35393468 35381196,35383226,35387176,35389963,35394214 Gene ID= ENSG00000100292.16 TPM= 134.02 Transcript Type= protein_coding chr22 35400063 35425430 35400063 35425430 + ENST00000216122.8@MCM5 ENST00000216122.8 protein_coding 35400063,35400431,35403207,35403414,35406553,35408408,35410744,35412510,35413875,35415829,35416339,35416638,35417744,35419884,35421318,35423214,35424154 35400208,35400605,35403333,35403542,35406725,35408563,35410910,35412681,35413986,35415972,35416404,35416814,35417856,35420012,35421460,35423341,35425430 Gene ID= ENSG00000100297.15 TPM= 43.47 Transcript Type= protein_coding chr22 35738736 35840587 35738736 35840587 - ENST00000405409.6@RBFOX2 ENST00000405409.6 protein_coding 35840192,35809780,35781600,35778025,35768257,35765423,35761415,35761202,35759888,35746473,35745923,35738736 35840587,35810004,35781746,35778078,35768349,35765483,35761468,35761294,35760020,35746561,35745995,35744249 Gene ID= ENSG00000100320.22 TPM= 11.77 Transcript Type= protein_coding chr22 36140330 36160929 36140330 36160929 - ENST00000422426.5@APOL3 ENST00000422426.5 protein_coding 36160669,36149259,36149046,36145473,36140330 36160929,36149371,36149142,36145599,36142058 Gene ID= ENSG00000128284.19 TPM= 2.72 Transcript Type= nonsense_mediated_decay chr22 36140331 36156974 36140331 36156974 - transcript1385.chr22.nic@APOL3 transcript1385.chr22.nic protein_coding 36156844,36149046,36145473,36140331 36156974,36149142,36145599,36142058 Gene ID= ENSG00000128284.19 TPM= 19.02 Transcript Type= NA chr22 36140331 36156951 36140331 36156951 - transcript1387.chr22.nic@APOL3 transcript1387.chr22.nic protein_coding 36156844,36149046,36145473,36140331 36156951,36149371,36145599,36142058 Gene ID= ENSG00000128284.19 TPM= 1.81 Transcript Type= NA chr22 36140330 36160929 36140330 36160929 - ENST00000349314.6@APOL3 ENST00000349314.6 protein_coding 36160669,36145473,36140330 36160929,36145599,36142058 Gene ID= ENSG00000128284.19 TPM= 2.72 Transcript Type= protein_coding chr22 36189129 36204840 36189129 36204840 - ENST00000616056.4@APOL4 ENST00000616056.4 protein_coding 36204628,36201993,36201700,36199330,36195311,36189129 36204840,36202055,36201888,36199376,36195437,36191912 Gene ID= ENSG00000100336.17 TPM= 2.72 Transcript Type= protein_coding chr22 36226358 36239580 36226358 36239580 - transcript1395.chr22.nnic@APOL2 transcript1395.chr22.nnic protein_coding 36239441,36236596,36233402,36233153,36231340,36226358 36239580,36237363,36233455,36233241,36231466,36228280 Gene ID= ENSG00000128335.13 TPM= 4.98 Transcript Type= NA chr22 36226203 36239643 36226203 36239643 - ENST00000358502.9@APOL2 ENST00000358502.9 protein_coding 36239441,36233402,36233153,36231340,36226203 36239643,36233455,36233241,36231466,36228280 Gene ID= ENSG00000128335.13 TPM= 20.37 Transcript Type= protein_coding chr22 36253072 36267524 36253072 36267524 + transcript1400.chr22.nnic@APOL1 transcript1400.chr22.nnic protein_coding 36253072,36254937,36257083,36257319,36261596,36265151,36266835 36253219,36254999,36257136,36257407,36261722,36266135,36267524 Gene ID= ENSG00000100342.20 TPM= 5.73 Transcript Type= NA chr22 36253010 36267525 36253010 36267525 + ENST00000397278.7@APOL1 ENST00000397278.7 protein_coding 36253010,36254937,36257083,36257319,36261596,36265151 36253219,36254999,36257136,36257407,36261722,36267525 Gene ID= ENSG00000100342.20 TPM= 10.26 Transcript Type= protein_coding chr22 36281281 36388018 36281281 36388018 - ENST00000216181.9@MYH9 ENST00000216181.9 protein_coding 36387807,36348904,36341370,36327461,36326568,36322429,36321758,36320798,36320220,36319540,36318207,36316517,36314145,36312049,36309282,36306414,36305930,36305033,36303995,36302568,36301534,36300851,36300127,36298919,36296843,36295505,36294932,36294092,36293759,36293329,36291986,36289085,36288727,36288252,36286718,36285865,36285658,36285121,36284403,36284093,36281281 36388018,36349255,36341526,36327488,36326661,36322521,36321821,36320896,36320363,36319635,36318325,36316669,36314318,36312222,36309396,36306607,36306051,36305102,36304155,36302676,36301665,36301057,36300264,36299042,36297014,36295717,36295076,36294298,36293863,36293481,36292234,36289297,36288939,36288413,36286846,36285953,36285781,36285329,36284511,36284265,36282785 Gene ID= ENSG00000100345.20 TPM= 366.75 Transcript Type= protein_coding chr22 36467036 36482030 36467036 36482030 - ENST00000216185.6@TXN2 ENST00000216185.6 protein_coding 36481564,36480575,36476733,36467036 36482030,36480837,36476856,36467917 Gene ID= ENSG00000100348.9 TPM= 282.68 Transcript Type= protein_coding chr22 36467036 36481594 36467036 36481594 - transcript1438.chr22.nic@TXN2 transcript1438.chr22.nic protein_coding 36480575,36476733,36467036 36481594,36476856,36467917 Gene ID= ENSG00000100348.9 TPM= 38.94 Transcript Type= NA chr22 36467037 36481659 36467037 36481659 - transcript1440.chr22.nnic@TXN2 transcript1440.chr22.nnic protein_coding 36481564,36480575,36467037 36481659,36480837,36467917 Gene ID= ENSG00000100348.9 TPM= 15.24 Transcript Type= NA chr22 36467046 36481634 36467046 36481634 - ENST00000416967.1@TXN2 ENST00000416967.1 protein_coding 36481564,36480575,36476733,36467046 36481634,36480787,36476856,36467917 Gene ID= ENSG00000100348.9 TPM= 18.26 Transcript Type= protein_coding chr22 36487190 36507101 36487190 36507101 - ENST00000397224.8@FOXRED2 ENST00000397224.8 protein_coding 36507009,36505896,36504515,36504098,36501241,36497991,36495967,36493633,36487190 36507101,36506423,36504766,36504367,36501407,36498156,36496208,36493803,36490267 Gene ID= ENSG00000100350.14 TPM= 3.62 Transcript Type= protein_coding chr22 36758206 36776139 36758206 36776139 - transcript1454.chr22.nic@IFT27 transcript1454.chr22.nic protein_coding 36776031,36775674,36767783,36767306,36766138,36763919,36762904,36758206 36776139,36775794,36767862,36767365,36766197,36764036,36763013,36758409 Gene ID= ENSG00000100360.14 TPM= 7.09 Transcript Type= NA chr22 36758206 36776142 36758206 36776142 - transcript1456.chr22.nic@IFT27 transcript1456.chr22.nic protein_coding 36775674,36767783,36766138,36763919,36762904,36758206 36776142,36767862,36767365,36764036,36763013,36758409 Gene ID= ENSG00000100360.14 TPM= 3.02 Transcript Type= NA chr22 36758203 36776133 36758203 36776133 - ENST00000433985.6@IFT27 ENST00000433985.6 protein_coding 36775674,36767783,36767306,36766138,36763919,36762904,36758203 36776133,36767862,36767365,36766197,36764036,36763013,36758409 Gene ID= ENSG00000100360.14 TPM= 36.97 Transcript Type= protein_coding chr22 36860988 36878015 36860988 36878015 + ENST00000248899.10@NCF4 ENST00000248899.10 protein_coding 36860988,36864045,36864919,36867392,36870415,36871652,36872327,36875653,36876029,36877628 36861203,36864129,36865072,36867462,36870542,36871709,36872425,36875783,36876094,36878015 Gene ID= ENSG00000100365.14 TPM= 16.3 Transcript Type= protein_coding chr22 36860988 36878015 36860988 36878015 + ENST00000397147.6@NCF4 ENST00000397147.6 protein_coding 36860988,36864045,36864919,36867392,36870415,36871652,36872327,36875653,36877628 36861203,36864129,36865072,36867462,36870542,36871709,36872425,36876094,36878015 Gene ID= ENSG00000100365.14 TPM= 5.43 Transcript Type= protein_coding chr22 36913628 36940449 36913628 36940449 + ENST00000403662.7@CSF2RB ENST00000403662.7 protein_coding 36913628,36922036,36923244,36925987,36929402,36929639,36930375,36930673,36932765,36933832,36935351,36935630,36936549,36937377 36913677,36922283,36923367,36926177,36929559,36929807,36930510,36930830,36932904,36933994,36935441,36935687,36936652,36940449 Gene ID= ENSG00000100368.13 TPM= 6.34 Transcript Type= protein_coding chr22 37010863 37019725 37010863 37019725 - transcript1477.chr22.nic@TST transcript1477.chr22.nic protein_coding 37019583,37018138,37010863 37019725,37018753,37011325 Gene ID= ENSG00000128311.13 TPM= 5.73 Transcript Type= NA chr22 37010859 37019467 37010859 37019467 - ENST00000403892.7@TST ENST00000403892.7 protein_coding 37018138,37010859 37019467,37011325 Gene ID= ENSG00000128311.13 TPM= 13.58 Transcript Type= protein_coding chr22 37010859 37019527 37010859 37019527 - ENST00000249042.7@TST ENST00000249042.7 protein_coding 37019400,37018138,37010859 37019527,37018753,37011325 Gene ID= ENSG00000128311.13 TPM= 97.19 Transcript Type= protein_coding chr22 37019747 37029821 37019747 37029821 + transcript1471.chr22.nnic@MPST transcript1471.chr22.nnic protein_coding 37019747,37024192,37026999,37029216 37019872,37024810,37027095,37029821 Gene ID= ENSG00000128309.16 TPM= 12.68 Transcript Type= NA chr22 37019768 37029822 37019768 37029822 + ENST00000429360.5@MPST ENST00000429360.5 protein_coding 37019768,37024192,37029216 37019872,37024810,37029822 Gene ID= ENSG00000128309.16 TPM= 162.55 Transcript Type= protein_coding chr22 37019772 37029796 37019772 37029796 + ENST00000404393.5@MPST ENST00000404393.5 protein_coding 37019772,37024192,37025002,37029216 37019774,37024810,37025127,37029796 Gene ID= ENSG00000128309.16 TPM= 1.06 Transcript Type= protein_coding chr22 37019768 37029819 37019768 37029819 + ENST00000341116.7@MPST ENST00000341116.7 protein_coding 37019768,37023752,37024192,37029216 37019872,37023927,37024810,37029819 Gene ID= ENSG00000128309.16 TPM= 14.04 Transcript Type= protein_coding chr22 37051727 37063389 37051727 37063389 + transcript1487.chr22.nic@KCTD17 transcript1487.chr22.nic protein_coding 37051727,37053100,37056320,37057398,37059313,37060823,37061104,37062525 37051949,37053208,37056411,37057493,37059438,37060922,37061629,37063389 Gene ID= ENSG00000100379.17 TPM= 1.81 Transcript Type= NA chr22 37051727 37063389 37051727 37063389 + transcript1494.chr22.nic@KCTD17 transcript1494.chr22.nic protein_coding 37051727,37053100,37056320,37057398,37059313,37060823 37051949,37053208,37056411,37057493,37059438,37063389 Gene ID= ENSG00000100379.17 TPM= 9.96 Transcript Type= NA chr22 37051739 37063390 37051739 37063390 + ENST00000402077.7@KCTD17 ENST00000402077.7 protein_coding 37051739,37053100,37056320,37057398,37059313,37060823,37061539,37062525 37051949,37053208,37056411,37057493,37059438,37060922,37061629,37063390 Gene ID= ENSG00000100379.17 TPM= 33.51 Transcript Type= protein_coding chr22 37051736 37063389 37051736 37063389 + ENST00000610767.4@KCTD17 ENST00000610767.4 protein_coding 37051736,37053100,37056320,37057398,37059313,37062525 37051949,37053208,37056411,37057493,37059438,37063389 Gene ID= ENSG00000100379.17 TPM= 4.53 Transcript Type= protein_coding chr22 37180167 37188289 37180167 37188289 - ENST00000337843.6@C1QTNF6 ENST00000337843.6 protein_coding 37188163,37185218,37180167 37188289,37185455,37182735 Gene ID= ENSG00000133466.13 TPM= 4.53 Transcript Type= protein_coding chr22 37225261 37244270 37225261 37244270 - ENST00000249071.10@RAC2 ENST00000249071.10 protein_coding 37244114,37241587,37232801,37231932,37231231,37226671,37225261 37244270,37241658,37232918,37231994,37231390,37226803,37226039 Gene ID= ENSG00000128340.14 TPM= 17.21 Transcript Type= protein_coding chr22 37282491 37315346 37282491 37315346 + transcript1506.chr22.nic@CYTH4 transcript1506.chr22.nic protein_coding 37282491,37292621,37294660,37295999,37297564,37299226,37300907,37303254,37304172,37309212,37310988,37311456,37312020,37313439 37282588,37292703,37294724,37296065,37297682,37299306,37301019,37303402,37304286,37309323,37311064,37311527,37312174,37315346 Gene ID= ENSG00000100055.20 TPM= 2.72 Transcript Type= NA chr22 37469065 37486401 37469065 37486401 - ENST00000356998.7@MFNG ENST00000356998.7 protein_coding 37485923,37480721,37480197,37479345,37476896,37474512,37472443,37469065 37486401,37480769,37480299,37479498,37476981,37474677,37472528,37470029 Gene ID= ENSG00000100060.17 TPM= 31.4 Transcript Type= protein_coding chr22 37469063 37486402 37469063 37486402 - transcript1516.chr22.nic@MFNG transcript1516.chr22.nic protein_coding 37485923,37480197,37479345,37476896,37474512,37472443,37469063 37486402,37480299,37479498,37476981,37474677,37472528,37470029 Gene ID= ENSG00000100060.17 TPM= 3.32 Transcript Type= NA chr22 37469063 37486387 37469063 37486387 - ENST00000416983.7@MFNG ENST00000416983.7 protein_coding 37485916,37480197,37479345,37476896,37474512,37472443,37469063 37486387,37480299,37479498,37476981,37474677,37472528,37470029 Gene ID= ENSG00000100060.17 TPM= 5.13 Transcript Type= protein_coding chr22 37490362 37519542 37490362 37519542 - ENST00000403299.5@CARD10 ENST00000403299.5 protein_coding 37519343,37518966,37517971,37515973,37510212,37508527,37507829,37506192,37504635,37504186,37503185,37502602,37497019,37496449,37495760,37495517,37494086,37492644,37492435,37491755,37490362 37519542,37519217,37518108,37516298,37510421,37508682,37507954,37506383,37504769,37504301,37503213,37502725,37497178,37496560,37496003,37495586,37494188,37492802,37492550,37491867,37491393 Gene ID= ENSG00000100065.14 TPM= 72.44 Transcript Type= protein_coding chr22 37563645 37569838 37563645 37569838 + transcript1526.chr22.nic@CDC42EP1 transcript1526.chr22.nic protein_coding 37563645,37566072,37568108 37563782,37566812,37569838 Gene ID= ENSG00000128283.6 TPM= 6.34 Transcript Type= NA chr22 37560447 37569405 37560447 37569405 + ENST00000249014.4@CDC42EP1 ENST00000249014.4 protein_coding 37560447,37566072,37568108 37560588,37566812,37569405 Gene ID= ENSG00000128283.6 TPM= 151.23 Transcript Type= protein_coding chr22 37608475 37633564 37608475 37633564 + ENST00000343632.8@GGA1 ENST00000343632.8 protein_coding 37608475,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601 37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633564 Gene ID= ENSG00000100083.18 TPM= 80.03 Transcript Type= protein_coding chr22 37608930 37633565 37608930 37633565 + transcript1539.chr22.nic@GGA1 transcript1539.chr22.nic protein_coding 37608930,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601 37609154,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633565 Gene ID= ENSG00000100083.18 TPM= 11.21 Transcript Type= NA chr22 37608474 37633565 37608474 37633565 + transcript1543.chr22.nic@GGA1 transcript1543.chr22.nic protein_coding 37608474,37614190,37616922,37620238,37620813,37621616,37623327,37623552,37624969,37625797,37629462,37629998,37630903,37631996,37632405,37632601 37608903,37614274,37618546,37620361,37620913,37621696,37623467,37623633,37625076,37625949,37629526,37630170,37631099,37632165,37632515,37633565 Gene ID= ENSG00000100083.18 TPM= 8.99 Transcript Type= NA chr22 37608845 37633564 37608845 37633564 + ENST00000325180.12@GGA1 ENST00000325180.12 protein_coding 37608845,37614190,37616922,37618448,37620238,37620813,37621616,37623327,37623552,37629462,37629998,37630903,37631996,37632405,37632601 37608903,37614274,37616997,37618546,37620361,37620913,37621696,37623467,37623633,37629526,37630170,37631099,37632165,37632515,37633564 Gene ID= ENSG00000100083.18 TPM= 4.1 Transcript Type= protein_coding chr22 37639475 37656117 37639475 37656117 + ENST00000357436.4@SH3BP1 ENST00000357436.4 protein_coding 37639475,37641126,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37655272 37639846,37641168,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37656117 Gene ID= ENSG00000100092.20 TPM= 2.72 Transcript Type= protein_coding chr22 37639472 37656114 37639472 37656114 + transcript1549.chr22.nic@SH3BP1 transcript1549.chr22.nic protein_coding 37639472,37641126,37641374,37642539,37642895,37643098,37643644,37644637,37644870,37645365,37646818,37647267,37647441,37648319,37650152,37650542,37653779,37655926 37639846,37641168,37641478,37642615,37643006,37643174,37643788,37644705,37644960,37645510,37646929,37647348,37647521,37648435,37650249,37650725,37653873,37656114 Gene ID= ENSG00000100092.20 TPM= 4.53 Transcript Type= NA chr22 37658727 37666934 37658727 37666934 + ENST00000215904.6@PDXP ENST00000215904.6 protein_coding 37658727,37665555 37659356,37666934 Gene ID= ENSG00000241360.1 TPM= 112.29 Transcript Type= protein_coding chr22 37675608 37679806 37675608 37679806 + ENST00000215909.9@LGALS1 ENST00000215909.9 protein_coding 37675608,37676986,37678483,37679603 37675711,37677065,37678654,37679806 Gene ID= ENSG00000100097.11 TPM= 572.76 Transcript Type= protein_coding chr22 37686323 37693476 37686323 37693476 + ENST00000438329.5@NOL12 ENST00000438329.5 protein_coding 37686323,37687910,37688312,37688850,37690697,37691174,37693332 37686475,37688015,37688360,37688992,37690794,37691424,37693476 Gene ID= ENSG00000273899.4 TPM= 18.11 Transcript Type= nonsense_mediated_decay chr22 37686323 37693478 37686323 37693478 + ENST00000359114.8@NOL12 ENST00000359114.8 protein_coding 37686323,37687910,37688312,37688850,37690697,37691174 37686475,37688015,37688360,37688992,37690794,37693478 Gene ID= ENSG00000273899.4 TPM= 15.39 Transcript Type= protein_coding chr22 37746204 37776530 37746204 37776530 + transcript1576.chr22.nnic@TRIOBP transcript1576.chr22.nnic protein_coding 37746204,37751772,37754916,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783 37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37776530 Gene ID= ENSG00000100106.19 TPM= 52.07 Transcript Type= NA chr22 37746233 37774140 37746233 37774140 + ENST00000403663.6@TRIOBP ENST00000403663.6 protein_coding 37746233,37751772,37754877,37755101,37755550,37757613,37759154,37765670,37768074,37769028,37769262,37771650,37772601,37773783 37746420,37751828,37754984,37755190,37755659,37758138,37759264,37765817,37768176,37769187,37769375,37771736,37772764,37774140 Gene ID= ENSG00000100106.19 TPM= 61.46 Transcript Type= protein_coding chr22 37746228 37760346 37746228 37760346 + ENST00000407319.6@TRIOBP ENST00000407319.6 protein_coding 37746228,37751772,37754877,37755101,37755550,37757613,37759154,37759417 37746420,37751828,37754984,37755190,37755659,37758138,37759264,37760346 Gene ID= ENSG00000100106.19 TPM= 13.58 Transcript Type= protein_coding chr22 37807872 37817375 37807872 37817375 + transcript1591.chr22.nic@GCAT transcript1591.chr22.nic protein_coding 37807872,37810027,37812887,37813463,37815126,37815418,37815663,37816200,37816567,37816929 37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816725,37817375 Gene ID= ENSG00000100116.16 TPM= 2.72 Transcript Type= NA chr22 37807872 37816899 37807872 37816899 + transcript1598.chr22.nic@GCAT transcript1598.chr22.nic protein_coding 37807872,37810027,37812887,37813463,37815126,37815663,37816200,37816567 37808163,37810157,37812988,37813609,37815500,37815834,37816321,37816899 Gene ID= ENSG00000100116.16 TPM= 3.62 Transcript Type= NA chr22 37807912 37816899 37807912 37816899 + ENST00000248924.10@GCAT ENST00000248924.10 protein_coding 37807912,37810027,37812887,37813463,37815126,37815418,37815663,37816200,37816567 37808163,37810157,37812988,37813609,37815280,37815500,37815834,37816321,37816899 Gene ID= ENSG00000100116.16 TPM= 51.62 Transcript Type= protein_coding chr22 37830853 37844329 37830853 37844329 - transcript1608.chr22.nic@ANKRD54 transcript1608.chr22.nic protein_coding 37843911,37840187,37838500,37833684,37832637,37830853 37844329,37840234,37838598,37833755,37833206,37832017 Gene ID= ENSG00000100124.14 TPM= 3.62 Transcript Type= NA chr22 37849372 37888782 37849372 37888782 + ENST00000624234.3@EIF3L ENST00000624234.3 protein_coding 37849372,37850015,37851280,37855565,37858679,37862969,37863272,37870176,37874370,37875841,37877674,37886765,37888426 37849482,37850063,37851490,37855644,37858740,37863038,37863345,37870347,37874524,37876011,37878171,37886845,37888782 Gene ID= ENSG00000100129.17 TPM= 329.62 Transcript Type= protein_coding chr22 37849375 37888630 37849375 37888630 + transcript1613.chr22.nnic@EIF3L transcript1613.chr22.nnic protein_coding 37849375,37850015,37851280,37855565,37858679,37862969,37863272,37870176,37874370,37875841,37877674,37888426 37849482,37850063,37851490,37855644,37858740,37863038,37863345,37870347,37874524,37876011,37878171,37888630 Gene ID= ENSG00000100129.17 TPM= 9.96 Transcript Type= NA chr22 37906315 37942001 37906315 37942001 + transcript1618.chr22.nic@MICALL1 transcript1618.chr22.nic protein_coding 37906315,37911952,37912351,37917707,37919036,37921972,37924660,37925661,37927411,37931799,37932553,37932798,37933039,37937080,37937746,37940709,37941670 37906568,37912000,37912492,37917795,37919178,37922426,37924717,37926043,37927826,37931933,37932679,37932888,37933112,37937194,37937792,37941533,37942001 Gene ID= ENSG00000100139.13 TPM= 1.81 Transcript Type= NA chr22 37953663 37969312 37953663 37969312 + ENST00000442738.6@POLR2F ENST00000442738.6 protein_coding 37953663,37956773,37959346,37967099,37967625 37953807,37956842,37959476,37967170,37969312 Gene ID= ENSG00000100142.14 TPM= 56.14 Transcript Type= protein_coding chr22 38057224 38075707 38057224 38075707 + transcript1621.chr22.nic@PICK1 transcript1621.chr22.nic protein_coding 38057224,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864 38057436,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075707 Gene ID= ENSG00000100151.15 TPM= 21.73 Transcript Type= NA chr22 38057404 38075707 38057404 38075707 + transcript1622.chr22.nnic@PICK1 transcript1622.chr22.nnic protein_coding 38057404,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864 38057436,38057850,38059345,38065130,38068407,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075707 Gene ID= ENSG00000100151.15 TPM= 2.26 Transcript Type= NA chr22 38057224 38075707 38057224 38075707 + transcript1627.chr22.nnic@PICK1 transcript1627.chr22.nnic protein_coding 38057224,38057753,38059234,38065002,38067704,38069033,38071682,38072477,38073000,38073773,38074307,38074864 38057436,38057850,38059345,38065130,38067770,38069122,38071744,38072610,38073092,38073823,38074451,38075707 Gene ID= ENSG00000100151.15 TPM= 2.26 Transcript Type= NA chr22 38057391 38075707 38057391 38075707 + transcript1633.chr22.nic@PICK1 transcript1633.chr22.nic protein_coding 38057391,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38074864 38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38074451,38075707 Gene ID= ENSG00000100151.15 TPM= 1.81 Transcript Type= NA chr22 38057407 38075701 38057407 38075701 + ENST00000356976.7@PICK1 ENST00000356976.7 protein_coding 38057407,38057753,38059234,38065002,38067704,38069033,38070838,38071682,38072477,38073000,38073773,38074307,38074864 38057587,38057850,38059345,38065130,38067770,38069122,38070891,38071744,38072610,38073092,38073823,38074451,38075701 Gene ID= ENSG00000100151.15 TPM= 16.3 Transcript Type= protein_coding chr22 38111496 38181795 38111496 38181795 - transcript1656.chr22.nic@PLA2G6 transcript1656.chr22.nic protein_coding 38181664,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38126371,38123095,38120759,38116075,38115527,38113487,38112504,38111496 38181795,38169467,38145653,38143288,38140169,38135084,38133013,38129562,38126449,38123258,38120909,38116211,38115681,38113654,38112577,38112305 Gene ID= ENSG00000184381.18 TPM= 4.83 Transcript Type= NA chr22 38111500 38181829 38111500 38181829 - ENST00000402064.5@PLA2G6 ENST00000402064.5 protein_coding 38181784,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38126371,38123095,38120759,38116075,38115527,38113487,38112504,38111500 38181829,38169471,38145653,38143288,38140169,38135084,38133013,38129562,38126449,38123258,38120909,38116211,38115681,38113654,38112577,38112305 Gene ID= ENSG00000184381.18 TPM= 7.09 Transcript Type= protein_coding chr22 38111496 38181754 38111496 38181754 - ENST00000335539.7@PLA2G6 ENST00000335539.7 protein_coding 38181664,38169218,38145438,38143105,38139982,38134988,38132831,38129454,38126371,38123095,38120759,38116075,38115527,38113487,38112504,38111496 38181754,38169471,38145653,38143288,38140169,38135084,38133013,38129562,38126449,38123258,38120909,38116211,38115681,38113654,38112577,38112305 Gene ID= ENSG00000184381.18 TPM= 7.09 Transcript Type= protein_coding chr22 38201882 38216511 38201882 38216511 + ENST00000338483.6@MAFF ENST00000338483.6 protein_coding 38201882,38213823,38214420 38202212,38213889,38216511 Gene ID= ENSG00000185022.11 TPM= 67.01 Transcript Type= protein_coding chr22 38219320 38273040 38219320 38273040 - transcript1671.chr22.nic@TMEM184B transcript1671.chr22.nic protein_coding 38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38222642,38219320 38273040,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38222662,38221710 Gene ID= ENSG00000198792.12 TPM= 3.62 Transcript Type= NA chr22 38219289 38273040 38219289 38273040 - transcript1674.chr22.nnic@TMEM184B transcript1674.chr22.nnic protein_coding 38272884,38247770,38245935,38231244,38230669,38226804,38225424,38224785,38219289 38273040,38248019,38246100,38231334,38230744,38226870,38225542,38224979,38221710 Gene ID= ENSG00000198792.12 TPM= 4.41 Transcript Type= NA chr22 38219289 38273040 38219289 38273040 - transcript1678.chr22.nnic@TMEM184B transcript1678.chr22.nnic protein_coding 38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219289 38273040,38248019,38246100,38231399,38230744,38226870,38225593,38224979,38221710 Gene ID= ENSG00000198792.12 TPM= 4.59 Transcript Type= NA chr22 38219291 38273034 38219291 38273034 - ENST00000361906.7@TMEM184B ENST00000361906.7 protein_coding 38272884,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219291 38273034,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38221710 Gene ID= ENSG00000198792.12 TPM= 109.03 Transcript Type= protein_coding chr22 38219312 38273010 38219312 38273010 - ENST00000436674.5@TMEM184B ENST00000436674.5 protein_coding 38272884,38247770,38246785,38245935,38231244,38230669,38226779,38225424,38224785,38219312 38273010,38248019,38246885,38246100,38231334,38230744,38226870,38225593,38224979,38221710 Gene ID= ENSG00000198792.12 TPM= 5.8 Transcript Type= nonsense_mediated_decay chr22 38219324 38272664 38219324 38272664 - ENST00000361684.8@TMEM184B ENST00000361684.8 protein_coding 38272499,38247770,38245935,38231244,38230669,38226779,38225424,38224785,38219324 38272664,38248019,38246100,38231334,38230744,38226870,38225593,38224979,38221710 Gene ID= ENSG00000198792.12 TPM= 4.71 Transcript Type= protein_coding chr22 38290705 38317435 38290705 38317435 - transcript1699.chr22.nic@CSNK1E transcript1699.chr22.nic protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38290705 38317435,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38292543 Gene ID= ENSG00000213923.11 TPM= 4.89 Transcript Type= NA chr22 38290684 38317435 38290684 38317435 - transcript1700.chr22.nic@CSNK1E transcript1700.chr22.nic protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38293255,38290684 38317435,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38291938 Gene ID= ENSG00000213923.11 TPM= 5.34 Transcript Type= NA chr22 38290692 38317435 38290692 38317435 - transcript1703.chr22.nic@CSNK1E transcript1703.chr22.nic protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38290692 38317435,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248 Gene ID= ENSG00000213923.11 TPM= 4.53 Transcript Type= NA chr22 38296206 38317435 38296206 38317435 - transcript1706.chr22.nic@CSNK1E transcript1706.chr22.nic protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38298094,38296206 38317435,38314169,38303248,38303009,38300952,38300065,38298934,38298203,38297998 Gene ID= ENSG00000213923.11 TPM= 14.49 Transcript Type= NA chr22 38296206 38317439 38296206 38317439 - ENST00000405675.7@CSNK1E ENST00000405675.7 protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296206 38317439,38314169,38303248,38303009,38300952,38300065,38298934,38297155 Gene ID= ENSG00000213923.11 TPM= 5.43 Transcript Type= protein_coding chr22 38290692 38317408 38290692 38317408 - ENST00000396832.5@CSNK1E ENST00000396832.5 protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38290692 38317408,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938 Gene ID= ENSG00000213923.11 TPM= 68.73 Transcript Type= protein_coding chr22 38293250 38317439 38293250 38317439 - ENST00000403904.5@CSNK1E ENST00000403904.5 protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293250 38317439,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319 Gene ID= ENSG00000213923.11 TPM= 1.81 Transcript Type= protein_coding chr22 38296205 38317411 38296205 38317411 - ENST00000413574.6@CSNK1E ENST00000413574.6 protein_coding 38317160,38314082,38303138,38302861,38300724,38299895,38298786,38296205 38317411,38314169,38303248,38303009,38300952,38300065,38298934,38296686 Gene ID= ENSG00000213923.11 TPM= 3.62 Transcript Type= protein_coding chr22 38290684 38317012 38290684 38317012 - transcript1696.chr22.nnic@Z98749.3 transcript1696.chr22.nnic protein_coding 38316657,38314082,38303138,38302861,38300724,38299895,38298786,38294342,38294109,38293255,38290684 38317012,38314169,38303248,38303009,38300952,38300065,38298934,38294534,38294248,38293319,38291938 Gene ID= ENSG00000283900.1 TPM= 5.34 Transcript Type= NA chr22 38335280 38398931 38335280 38398931 - transcript1716.chr22.nic@Z98749.3 transcript1716.chr22.nic protein_coding 38398780,38380937,38380370,38361399,38335280 38398931,38380990,38380423,38361560,38336706 Gene ID= ENSG00000283900.1 TPM= 2.72 Transcript Type= NA chr22 38468062 38483447 38468062 38483447 + ENST00000216014.8@KDELR3 ENST00000216014.8 protein_coding 38468062,38474523,38479593,38481212,38482496 38468324,38474623,38479751,38481464,38483447 Gene ID= ENSG00000100196.10 TPM= 7.24 Transcript Type= protein_coding chr22 38483440 38506337 38483440 38506337 - ENST00000396821.7@DDX17 ENST00000396821.7 protein_coding 38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38492056,38487873,38483440 38506337,38501280,38499499,38498573,38498150,38495937,38495046,38494802,38494131,38493771,38492115,38488115,38486440 Gene ID= ENSG00000100201.20 TPM= 201.94 Transcript Type= protein_coding chr22 38490575 38506339 38490575 38506339 - transcript1725.chr22.nnic@DDX17 transcript1725.chr22.nnic protein_coding 38505951,38501130,38499400,38498440,38498085,38495796,38494886,38494630,38494021,38493710,38490575 38506339,38501280,38499499,38498575,38498152,38495937,38495048,38494802,38494131,38493771,38492117 Gene ID= ENSG00000100201.20 TPM= 16.3 Transcript Type= NA chr22 38656641 38673854 38656641 38673854 + transcript1733.chr22.nnic@CBY1 transcript1733.chr22.nnic protein_coding 38656641,38656956,38668017,38670884,38671070,38673159 38656750,38657143,38668132,38670989,38671188,38673854 Gene ID= ENSG00000100211.10 TPM= 4.83 Transcript Type= NA chr22 38656662 38673854 38656662 38673854 + transcript1737.chr22.nnic@CBY1 transcript1737.chr22.nnic protein_coding 38656662,38670884,38671070,38673159 38656750,38670989,38671188,38673854 Gene ID= ENSG00000100211.10 TPM= 1.81 Transcript Type= NA chr22 38656651 38673846 38656651 38673846 + ENST00000396811.6@CBY1 ENST00000396811.6 protein_coding 38656651,38665546,38668017,38670884,38671070,38673159 38656750,38665685,38668132,38670989,38671188,38673846 Gene ID= ENSG00000100211.10 TPM= 3.92 Transcript Type= protein_coding chr22 38656655 38673854 38656655 38673854 + ENST00000216029.7@CBY1 ENST00000216029.7 protein_coding 38656655,38668017,38670884,38671070,38673159 38656750,38668132,38670989,38671188,38673854 Gene ID= ENSG00000100211.10 TPM= 46.48 Transcript Type= protein_coding chr22 38681948 38685421 38681948 38685421 + ENST00000216034.5@TOMM22 ENST00000216034.5 protein_coding 38681948,38682323,38682879,38683767 38682095,38682441,38682996,38685421 Gene ID= ENSG00000100216.5 TPM= 57.05 Transcript Type= protein_coding chr22 38705723 38733587 38705723 38733587 + ENST00000216044.9@GTPBP1 ENST00000216044.9 protein_coding 38705723,38708845,38715907,38716652,38721742,38724297,38726006,38726258,38727213,38727983,38729462,38730612 38706147,38708956,38716087,38717000,38721865,38724411,38726150,38726440,38727348,38728161,38729662,38733587 Gene ID= ENSG00000100226.15 TPM= 33.51 Transcript Type= protein_coding chr22 38734715 38756043 38734715 38756043 - transcript1743.chr22.nic@SUN2 transcript1743.chr22.nic protein_coding 38755763,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734715 38756043,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380 Gene ID= ENSG00000100242.15 TPM= 106.19 Transcript Type= NA chr22 38733461 38756166 38733461 38756166 - transcript1749.chr22.nic@SUN2 transcript1749.chr22.nic protein_coding 38755763,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38733461 38756166,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380 Gene ID= ENSG00000100242.15 TPM= 156.9 Transcript Type= NA chr22 38734725 38755528 38734725 38755528 - ENST00000405510.5@SUN2 ENST00000405510.5 protein_coding 38755272,38754642,38752507,38751210,38750898,38750225,38749766,38748713,38745684,38742301,38741494,38741007,38740267,38739722,38739342,38738873,38738587,38738173,38734725 38755528,38754706,38752665,38751373,38751035,38750320,38749859,38748783,38745811,38742555,38741571,38741050,38740432,38739943,38739426,38738988,38738754,38738265,38736380 Gene ID= ENSG00000100242.15 TPM= 34.66 Transcript Type= protein_coding chr22 38778508 38794173 38778508 38794173 - ENST00000216068.8@DNAL4 ENST00000216068.8 protein_coding 38794068,38782663,38780926,38778508 38794173,38782870,38781009,38779613 Gene ID= ENSG00000100246.12 TPM= 23.54 Transcript Type= protein_coding chr22 38861450 38872314 38861450 38872314 - ENST00000407418.7@CBX6 ENST00000407418.7 protein_coding 38872122,38871902,38871692,38871480,38861450 38872314,38871945,38871757,38871546,38867201 Gene ID= ENSG00000183741.11 TPM= 43.47 Transcript Type= protein_coding chr22 38864229 38872216 38864229 38872216 - ENST00000216083.6@CBX6 ENST00000216083.6 protein_coding 38872122,38871902,38871692,38871480,38864229 38872216,38871945,38871757,38871546,38867147 Gene ID= ENSG00000183741.11 TPM= 23.54 Transcript Type= protein_coding chr22 38982409 38992784 38982409 38992784 + ENST00000333467.3@APOBEC3B ENST00000333467.3 protein_coding 38982409,38984075,38985812,38986298,38989457,38991332,38992034,38992431 38982470,38984231,38986091,38986412,38989610,38991626,38992149,38992784 Gene ID= ENSG00000179750.15 TPM= 2.72 Transcript Type= protein_coding chr22 39014083 39020352 39014083 39020352 + ENST00000361441.4@APOBEC3C ENST00000361441.4 protein_coding 39014083,39015595,39017766,39018269 39014379,39015751,39018045,39020352 Gene ID= ENSG00000244509.3 TPM= 124.97 Transcript Type= protein_coding chr22 39021113 39033276 39021113 39033276 + ENST00000216099.12@APOBEC3D ENST00000216099.12 protein_coding 39021113,39022822,39025070,39025557,39029363,39031694,39032198 39021536,39023014,39025349,39025671,39029519,39031973,39033276 Gene ID= ENSG00000243811.8 TPM= 3.62 Transcript Type= protein_coding chr22 39040620 39087743 39040620 39087743 + transcript1789.chr22.nnic@APOBEC3G transcript1789.chr22.nnic protein_coding 39040620,39077036,39078932,39080933,39081471,39083731,39086279,39087011,39087407 39040634,39077378,39079085,39081227,39081585,39083884,39086567,39087126,39087743 Gene ID= ENSG00000239713.8 TPM= 1.81 Transcript Type= NA chr22 39077064 39087743 39077064 39087743 + transcript1792.chr22.nic@APOBEC3G transcript1792.chr22.nic protein_coding 39077064,39080933,39081471,39083731,39086279,39087011,39087407 39077378,39081227,39081585,39083884,39086567,39087126,39087743 Gene ID= ENSG00000239713.8 TPM= 2.72 Transcript Type= NA chr22 39077005 39087743 39077005 39087743 + ENST00000407997.3@APOBEC3G ENST00000407997.3 protein_coding 39077005,39078932,39080933,39081471,39083731,39086279,39087011,39087407 39077378,39079085,39081227,39081585,39083884,39086567,39087126,39087743 Gene ID= ENSG00000239713.8 TPM= 26.26 Transcript Type= protein_coding chr22 39147118 39152674 39147118 39152674 - ENST00000482294.1@CBX7 ENST00000482294.1 protein_coding 39152376,39147118 39152674,39149832 Gene ID= ENSG00000100307.12 TPM= 1.81 Transcript Type= retained_intron chr22 39130772 39152650 39130772 39152650 - ENST00000216133.9@CBX7 ENST00000216133.9 protein_coding 39152376,39149789,39141371,39138636,39134401,39130772 39152650,39149832,39141436,39138702,39134752,39134048 Gene ID= ENSG00000100307.12 TPM= 30.79 Transcript Type= protein_coding chr22 39312884 39319771 39312884 39319771 - ENST00000216146.8@RPL3 ENST00000216146.8 protein_coding 39319595,39318400,39317461,39316706,39315369,39314686,39314107,39313634,39313191,39312884 39319771,39318592,39317629,39316841,39315555,39314846,39314208,39313729,39313310,39312984 Gene ID= ENSG00000100316.15 TPM= 3047.61 Transcript Type= protein_coding chr22 39349855 39385574 39349855 39385574 + transcript1846.chr22.nnic@SYNGR1 transcript1846.chr22.nnic protein_coding 39349855,39374316,39376052,39381762 39350109,39374553,39376197,39385574 Gene ID= ENSG00000100321.14 TPM= 3.62 Transcript Type= NA chr22 39349956 39378382 39349956 39378382 + transcript1848.chr22.nnic@SYNGR1 transcript1848.chr22.nnic protein_coding 39349956,39374316,39376052,39377598 39350109,39374571,39376197,39378382 Gene ID= ENSG00000100321.14 TPM= 4.07 Transcript Type= NA chr22 39349925 39378389 39349925 39378389 + ENST00000318801.8@SYNGR1 ENST00000318801.8 protein_coding 39349925,39374316,39376052,39377598 39350109,39374553,39376197,39378389 Gene ID= ENSG00000100321.14 TPM= 90.1 Transcript Type= protein_coding chr22 39349996 39385588 39349996 39385588 + ENST00000328933.9@SYNGR1 ENST00000328933.9 protein_coding 39349996,39374316,39376052,39381696 39350109,39374553,39376197,39385588 Gene ID= ENSG00000100321.14 TPM= 13.58 Transcript Type= protein_coding chr22 39399741 39431882 39399741 39431882 + ENST00000216160.10@TAB1 ENST00000216160.10 protein_coding 39399741,39415006,39415500,39416791,39417711,39418732,39419519,39421827,39426703,39428021,39430015 39399835,39415142,39415653,39416877,39417849,39418845,39419630,39421971,39426925,39428183,39431882 Gene ID= ENSG00000100324.13 TPM= 23.54 Transcript Type= protein_coding chr22 39502353 39518132 39502353 39518132 + ENST00000325301.6@MIEF1 ENST00000325301.6 protein_coding 39502353,39504203,39511288,39511849,39512232,39513517 39502437,39504534,39511438,39512026,39512494,39518132 Gene ID= ENSG00000100335.13 TPM= 16.3 Transcript Type= protein_coding chr22 39502302 39516380 39502302 39516380 + ENST00000433117.6@MIEF1 ENST00000433117.6 protein_coding 39502302,39504203,39511288,39511849,39512318,39513517 39502437,39504534,39511438,39512026,39512494,39516380 Gene ID= ENSG00000100335.13 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr22 39520564 39522683 39520564 39522683 + ENST00000337304.2@ATF4 ENST00000337304.2 protein_coding 39520564,39521773 39521671,39522683 Gene ID= ENSG00000128272.14 TPM= 10.26 Transcript Type= protein_coding chr22 39520564 39522685 39520564 39522685 + ENST00000396680.2@ATF4 ENST00000396680.2 protein_coding 39520564,39521354,39521773 39520751,39521671,39522685 Gene ID= ENSG00000128272.14 TPM= 156.05 Transcript Type= protein_coding chr22 39529093 39532855 39529093 39532855 - ENST00000334678.7@RPS19BP1 ENST00000334678.7 protein_coding 39532687,39532395,39529820,39529093 39532855,39532523,39529917,39529623 Gene ID= ENSG00000187051.8 TPM= 99.61 Transcript Type= protein_coding chr22 39593295 39650305 39593295 39650305 + transcript1864.chr22.nnic@CACNA1I transcript1864.chr22.nnic protein_coding 39593295,39596994,39598169,39600520,39619310,39634565,39640867,39642797,39646569,39649501 39593371,39597218,39598262,39600653,39619407,39634724,39641182,39642889,39646881,39650305 Gene ID= ENSG00000100346.17 TPM= 1.81 Transcript Type= NA chr22 40177926 40323763 40177926 40323763 + transcript1868.chr22.nic@TNRC6B transcript1868.chr22.nic protein_coding 40177926,40246015,40251179,40261832,40264688,40270122,40273425,40277077,40277999,40279995,40285645,40300455,40300910,40301150,40308512,40310817,40312505,40312902,40315283,40315942,40321090,40322854 40178140,40246102,40251200,40262173,40267036,40270280,40273600,40277151,40278044,40280143,40285770,40300586,40301005,40301333,40308649,40310993,40312651,40312997,40315507,40316012,40321229,40323763 Gene ID= ENSG00000100354.20 TPM= 7.24 Transcript Type= NA chr22 40346500 40369367 40346500 40369367 + ENST00000623063.3@ADSL ENST00000623063.3 protein_coding 40346500,40349832,40353073,40354248,40358864,40359260,40360402,40361273,40361488,40362981,40364276,40364880,40366436 40346711,40350035,40353117,40354327,40359035,40359306,40360492,40361342,40361635,40363071,40364365,40365056,40369367 Gene ID= ENSG00000239900.12 TPM= 41.66 Transcript Type= protein_coding chr22 40346503 40366996 40346503 40366996 + ENST00000342312.9@ADSL ENST00000342312.9 protein_coding 40346503,40349832,40353073,40354248,40358864,40359260,40360402,40361273,40361488,40362981,40364276,40366436 40346711,40350035,40353117,40354327,40359035,40359306,40360492,40361342,40361635,40363071,40364365,40366996 Gene ID= ENSG00000239900.12 TPM= 6.34 Transcript Type= protein_coding chr22 40370559 40410109 40370559 40410109 + transcript1879.chr22.nnic@SGSM3 transcript1879.chr22.nnic protein_coding 40370559,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409199,40409465,40409682 40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410109 Gene ID= ENSG00000100359.20 TPM= 9.39 Transcript Type= NA chr22 40370559 40410110 40370559 40410110 + transcript1887.chr22.nnic@SGSM3 transcript1887.chr22.nnic protein_coding 40370559,40400696,40401593,40402139,40404309,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682 40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410110 Gene ID= ENSG00000100359.20 TPM= 9.54 Transcript Type= NA chr22 40370559 40410289 40370559 40410289 + transcript1894.chr22.nic@SGSM3 transcript1894.chr22.nic protein_coding 40370559,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409465,40409682 40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409372,40409525,40410289 Gene ID= ENSG00000100359.20 TPM= 15.73 Transcript Type= NA chr22 40370559 40410110 40370559 40410110 + transcript1909.chr22.nic@SGSM3 transcript1909.chr22.nic protein_coding 40370559,40400696,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682 40370688,40400813,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410110 Gene ID= ENSG00000100359.20 TPM= 14.06 Transcript Type= NA chr22 40370611 40410289 40370611 40410289 + ENST00000248929.13@SGSM3 ENST00000248929.13 protein_coding 40370611,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407201,40407413,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682 40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407071,40407328,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410289 Gene ID= ENSG00000100359.20 TPM= 167.1 Transcript Type= protein_coding chr22 40370639 40410108 40370639 40410108 + ENST00000485962.5@SGSM3 ENST00000485962.5 protein_coding 40370639,40400696,40401593,40402139,40404247,40404557,40405141,40405649,40406078,40406438,40407017,40407789,40408071,40408277,40408627,40408794,40408933,40409250,40409465,40409682 40370688,40400813,40401675,40402205,40404455,40404664,40405284,40405844,40406223,40406662,40407568,40407843,40408120,40408429,40408697,40408842,40409018,40409372,40409525,40410108 Gene ID= ENSG00000100359.20 TPM= 2.29 Transcript Type= retained_intron chr22 40429351 40636720 40429351 40636720 - transcript1942.chr22.nic@MKL1 transcript1942.chr22.nic protein_coding 40636478,40594674,40552106,40463221,40435499,40431405,40429351 40636720,40594735,40552367,40463286,40435554,40431480,40429767 Gene ID= ENSG00000196588.14 TPM= 1.81 Transcript Type= NA chr22 40429351 40636719 40429351 40636719 - transcript1943.chr22.nic@MKL1 transcript1943.chr22.nic protein_coding 40636478,40552106,40463221,40435499,40431405,40429351 40636719,40552367,40463286,40435554,40431480,40429767 Gene ID= ENSG00000196588.14 TPM= 1.81 Transcript Type= NA chr22 40769630 40819378 40769630 40819378 - transcript1948.chr22.nnic@SLC25A17 transcript1948.chr22.nnic protein_coding 40819195,40779009,40777228,40777040,40773937,40769630 40819378,40779125,40777373,40777135,40774019,40770981 Gene ID= ENSG00000100372.14 TPM= 2.72 Transcript Type= NA chr22 40769630 40819382 40769630 40819382 - ENST00000435456.6@SLC25A17 ENST00000435456.6 protein_coding 40819195,40799023,40794514,40792525,40779009,40777228,40777040,40773937,40769630 40819382,40799083,40794580,40792676,40779125,40777373,40777135,40774019,40770981 Gene ID= ENSG00000100372.14 TPM= 34.41 Transcript Type= protein_coding chr22 40857098 40932815 40857098 40932815 + ENST00000357137.8@XPNPEP3 ENST00000357137.8 protein_coding 40857098,40868999,40881770,40886313,40907587,40909122,40914239,40922333,40924362,40926269 40857245,40869115,40882177,40886515,40907649,40909235,40914324,40922513,40924482,40932815 Gene ID= ENSG00000196236.12 TPM= 16.3 Transcript Type= protein_coding chr22 40951333 40972667 40951333 40972667 + transcript1966.chr22.nnic@RBX1 transcript1966.chr22.nnic protein_coding 40951333,40953555,40955287,40964047,40967799,40972476 40951476,40953633,40955446,40964117,40967884,40972667 Gene ID= ENSG00000100387.8 TPM= 8.15 Transcript Type= NA chr22 41205312 41231270 41205312 41231270 + transcript1983.chr22.nic@L3MBTL2 transcript1983.chr22.nic protein_coding 41205312,41206007,41209696,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139 41205386,41206125,41209933,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231270 Gene ID= ENSG00000100395.14 TPM= 3.02 Transcript Type= NA chr22 41205299 41231270 41205299 41231270 + transcript1987.chr22.nic@L3MBTL2 transcript1987.chr22.nic protein_coding 41205299,41209696,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139 41205386,41209933,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231270 Gene ID= ENSG00000100395.14 TPM= 3.02 Transcript Type= NA chr22 41205205 41231271 41205205 41231271 + ENST00000216237.9@L3MBTL2 ENST00000216237.9 protein_coding 41205205,41209696,41213893,41216139,41217123,41219419,41220734,41221199,41224020,41224725,41224967,41225794,41226662,41227089,41227804,41229540,41230139 41205386,41209933,41214026,41216262,41217202,41219536,41220868,41221287,41224251,41224801,41225071,41225941,41226744,41227323,41227869,41229656,41231271 Gene ID= ENSG00000100395.14 TPM= 80.89 Transcript Type= protein_coding chr22 41229257 41238121 41229257 41238121 - transcript1988.chr22.nic@CHADL transcript1988.chr22.nic protein_coding 41237176,41236484,41235145,41229257 41238121,41236650,41235343,41229730 Gene ID= ENSG00000100399.15 TPM= 13.58 Transcript Type= NA chr22 41245604 41286218 41245604 41286218 - transcript1996.chr22.nnic@RANGAP1 transcript1996.chr22.nnic protein_coding 41285986,41284901,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245604 41286218,41285153,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672 Gene ID= ENSG00000100401.19 TPM= 7.32 Transcript Type= NA chr22 41245604 41286916 41245604 41286916 - transcript2002.chr22.nnic@RANGAP1 transcript2002.chr22.nnic protein_coding 41285544,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245604 41286916,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672 Gene ID= ENSG00000100401.19 TPM= 20.9 Transcript Type= NA chr22 41245611 41286251 41245611 41286251 - ENST00000356244.7@RANGAP1 ENST00000356244.7 protein_coding 41285986,41280933,41274600,41268097,41264664,41261446,41257948,41256711,41256191,41256021,41254308,41252872,41251007,41249729,41249330,41245611 41286251,41281082,41274727,41268156,41264843,41261580,41258106,41256824,41256290,41256105,41254494,41252991,41251109,41249817,41249451,41246672 Gene ID= ENSG00000100401.19 TPM= 127.75 Transcript Type= protein_coding chr22 41301522 41360147 41301522 41360147 + ENST00000352645.4@ZC3H7B ENST00000352645.4 protein_coding 41301522,41320655,41325564,41325721,41327206,41330023,41332171,41338313,41339001,41339816,41341088,41342529,41343415,41346003,41348067,41349120,41351561,41355469,41355757,41355954,41356343,41356645,41357177 41301772,41320713,41325597,41325918,41327364,41330103,41332227,41338355,41339191,41340137,41341146,41342628,41343576,41346208,41348167,41349301,41351646,41355602,41355862,41356062,41356476,41356808,41360147 Gene ID= ENSG00000100403.11 TPM= 19.92 Transcript Type= protein_coding chr22 41367333 41399324 41367333 41399324 + ENST00000406644.7@TEF ENST00000406644.7 protein_coding 41367333,41387351,41394096,41395745 41367599,41387668,41394316,41399324 Gene ID= ENSG00000167074.14 TPM= 15.39 Transcript Type= protein_coding chr22 41381929 41399326 41381929 41399326 + ENST00000266304.8@TEF ENST00000266304.8 protein_coding 41381929,41387351,41394096,41395745 41382201,41387668,41394316,41399326 Gene ID= ENSG00000167074.14 TPM= 52.52 Transcript Type= protein_coding chr22 41433492 41447023 41433492 41447023 - ENST00000327492.3@TOB2 ENST00000327492.3 protein_coding 41446379,41433492 41447023,41437407 Gene ID= ENSG00000183864.4 TPM= 106.85 Transcript Type= protein_coding chr22 41459717 41468725 41459717 41468725 - ENST00000216252.3@PHF5A ENST00000216252.3 protein_coding 41468602,41468124,41467448,41459717 41468725,41468147,41467614,41460487 Gene ID= ENSG00000100410.7 TPM= 9.06 Transcript Type= protein_coding chr22 41469125 41528989 41469125 41528989 + ENST00000216254.8@ACO2 ENST00000216254.8 protein_coding 41469125,41499726,41507791,41511876,41515377,41515767,41517527,41518481,41520171,41522830,41523205,41523830,41524846,41525193,41526262,41527288,41527901,41528479 41469182,41499862,41508049,41511968,41515535,41515917,41517631,41518572,41520276,41522987,41523278,41523941,41524968,41525348,41526453,41527420,41528022,41528989 Gene ID= ENSG00000100412.15 TPM= 459 Transcript Type= protein_coding chr22 41525804 41544489 41525804 41544489 - transcript2048.chr22.nic@POLR3H transcript2048.chr22.nic protein_coding 41543991,41540699,41533522,41532659,41532094,41530687,41525804 41544489,41540795,41533687,41532745,41532157,41530888,41529336 Gene ID= ENSG00000100413.16 TPM= 7.24 Transcript Type= NA chr22 41525826 41544445 41525826 41544445 - ENST00000355209.8@POLR3H ENST00000355209.8 protein_coding 41543991,41540699,41532659,41532094,41530687,41525826 41544445,41540795,41532745,41532157,41530888,41529336 Gene ID= ENSG00000100413.16 TPM= 62.03 Transcript Type= protein_coding chr22 41525804 41544489 41525804 41544489 - ENST00000396504.6@POLR3H ENST00000396504.6 protein_coding 41544428,41543991,41540699,41532659,41532094,41530687,41525804 41544489,41544121,41540795,41532745,41532157,41530888,41529336 Gene ID= ENSG00000100413.16 TPM= 12.22 Transcript Type= protein_coding chr22 41528843 41544455 41528843 41544455 - ENST00000431534.5@POLR3H ENST00000431534.5 protein_coding 41543991,41540699,41532604,41532094,41530687,41528843 41544455,41540795,41532745,41532157,41530888,41529336 Gene ID= ENSG00000100413.16 TPM= 5.43 Transcript Type= nonsense_mediated_decay chr22 41560763 41576666 41560763 41576666 + ENST00000306149.11@CSDC2 ENST00000306149.11 protein_coding 41560763,41571843,41573655,41574733 41561183,41572141,41573777,41576666 Gene ID= ENSG00000172346.14 TPM= 905.55 Transcript Type= protein_coding chr22 41576894 41589890 41576894 41589890 - ENST00000216259.7@PMM1 ENST00000216259.7 protein_coding 41589719,41586076,41584527,41584281,41583959,41578806,41577808,41576894 41589890,41586193,41584603,41584372,41584058,41578881,41577923,41577440 Gene ID= ENSG00000100417.11 TPM= 90.55 Transcript Type= protein_coding chr22 41576937 41589818 41576937 41589818 - ENST00000485648.5@PMM1 ENST00000485648.5 protein_coding 41589719,41586076,41584527,41583959,41578806,41577808,41576937 41589818,41586193,41584603,41584372,41578881,41577923,41577440 Gene ID= ENSG00000100417.11 TPM= 5.43 Transcript Type= retained_intron chr22 41598029 41621080 41598029 41621080 - transcript2089.chr22.nnic@DESI1 transcript2089.chr22.nnic protein_coding 41620752,41607840,41607262,41604044,41603259,41600176,41598029 41621080,41607861,41607331,41604153,41603381,41601190,41599587 Gene ID= ENSG00000100418.7 TPM= 17.21 Transcript Type= NA chr22 41598028 41621096 41598028 41621096 - ENST00000263256.6@DESI1 ENST00000263256.6 protein_coding 41620752,41607840,41607262,41604044,41603259,41598028 41621096,41607861,41607331,41604153,41603381,41601190 Gene ID= ENSG00000100418.7 TPM= 15.39 Transcript Type= protein_coding chr22 41621339 41664047 41621339 41664047 + transcript2098.chr22.nnic@XRCC6 transcript2098.chr22.nnic protein_coding 41621339,41621990,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622 41621410,41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664047 Gene ID= ENSG00000196419.12 TPM= 29.84 Transcript Type= NA chr22 41621163 41664048 41621163 41664048 + ENST00000428575.6@XRCC6 ENST00000428575.6 protein_coding 41621163,41621990,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622 41621345,41622086,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664048 Gene ID= ENSG00000196419.12 TPM= 10.52 Transcript Type= protein_coding chr22 41621119 41664039 41621119 41664039 + ENST00000360079.7@XRCC6 ENST00000360079.7 protein_coding 41621119,41621990,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622 41621345,41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039 Gene ID= ENSG00000196419.12 TPM= 423.75 Transcript Type= protein_coding chr22 41621295 41664048 41621295 41664048 + ENST00000402580.7@XRCC6 ENST00000402580.7 protein_coding 41621295,41621990,41628118,41636236,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622 41621345,41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664048 Gene ID= ENSG00000196419.12 TPM= 5.99 Transcript Type= protein_coding chr22 41621350 41664039 41621350 41664039 + ENST00000359308.8@XRCC6 ENST00000359308.8 protein_coding 41621350,41628118,41636113,41636516,41637608,41646896,41650723,41653529,41656903,41658252,41661331,41663622 41622086,41628230,41636251,41636770,41637791,41647082,41650891,41653690,41657032,41658352,41661444,41664039 Gene ID= ENSG00000196419.12 TPM= 17.16 Transcript Type= protein_coding chr22 41673930 41688909 41673930 41688909 - ENST00000355257.7@SNU13 ENST00000355257.7 protein_coding 41688794,41680244,41673930 41688909,41680364,41675195 Gene ID= ENSG00000100138.13 TPM= 133.12 Transcript Type= protein_coding chr22 41673967 41688881 41673967 41688881 - ENST00000401959.5@SNU13 ENST00000401959.5 protein_coding 41688794,41682356,41680244,41673967 41688881,41682587,41680364,41675195 Gene ID= ENSG00000100138.13 TPM= 22.64 Transcript Type= protein_coding chr22 41688948 41698136 41688948 41698136 + transcript2109.chr22.nnic@C22orf46 transcript2109.chr22.nnic protein_coding 41688948,41690784,41693463,41693938,41696779 41689304,41690843,41693851,41694104,41698136 Gene ID= ENSG00000184208.10 TPM= 1.81 Transcript Type= NA chr22 41800679 41826299 41800679 41826299 + ENST00000255784.5@CCDC134 ENST00000255784.5 protein_coding 41800679,41808875,41809879,41810207,41813264,41813751,41825698 41800766,41808993,41810000,41810291,41813445,41813822,41826299 Gene ID= ENSG00000100147.13 TPM= 14.49 Transcript Type= protein_coding chr22 41833105 41907308 41833105 41907308 + ENST00000361204.8@SREBF2 ENST00000361204.8 protein_coding 41833105,41866831,41868611,41870889,41873798,41875337,41875543,41877229,41877942,41880716,41884842,41893117,41894820,41897052,41898649,41900330,41902970,41904863,41905440 41833358,41867280,41868792,41871035,41874019,41875451,41875724,41877421,41878123,41880992,41885011,41893285,41894937,41897161,41898781,41900498,41903155,41904974,41907308 Gene ID= ENSG00000198911.11 TPM= 337.49 Transcript Type= protein_coding chr22 41833079 41907307 41833079 41907307 + ENST00000612482.4@SREBF2 ENST00000612482.4 protein_coding 41833079,41866831,41868611,41870889,41873798,41875337,41875543,41877229,41877942,41878659,41880716,41884842,41893117,41894820,41897052,41898649,41900330,41902970,41904863,41905440 41833358,41867280,41868792,41871035,41874019,41875451,41875724,41877421,41878123,41878758,41880992,41885011,41893285,41894937,41897161,41898781,41900498,41903155,41904974,41907307 Gene ID= ENSG00000198911.11 TPM= 6.96 Transcript Type= protein_coding chr22 41908699 41915135 41908699 41915135 - transcript2149.chr22.nnic@SHISA8 transcript2149.chr22.nnic protein_coding 41914138,41911216,41910408,41908699 41915135,41911349,41910719,41910147 Gene ID= ENSG00000234965.2 TPM= 37.49 Transcript Type= NA chr22 41909534 41915135 41909534 41915135 - transcript2152.chr22.nnic@SHISA8 transcript2152.chr22.nnic protein_coding 41914138,41911216,41910408,41909534 41915135,41911349,41910839,41910147 Gene ID= ENSG00000234965.2 TPM= 61.33 Transcript Type= NA chr22 41909534 41915135 41909534 41915135 - transcript2155.chr22.nic@SHISA8 transcript2155.chr22.nic protein_coding 41914138,41910408,41909534 41915135,41911349,41910147 Gene ID= ENSG00000234965.2 TPM= 21.49 Transcript Type= NA chr22 41938721 41947164 41938721 41947164 - ENST00000215980.9@CENPM ENST00000215980.9 protein_coding 41947020,41946417,41945913,41945225,41943610,41938721 41947164,41946496,41946005,41945304,41943701,41939196 Gene ID= ENSG00000100162.14 TPM= 2.72 Transcript Type= protein_coding chr22 42058354 42070830 42058354 42070830 - ENST00000396398.7@NAGA ENST00000396398.7 protein_coding 42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42058354 42070830,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413 Gene ID= ENSG00000198951.11 TPM= 41.66 Transcript Type= protein_coding chr22 42059796 42070830 42059796 42070830 - ENST00000403363.5@NAGA ENST00000403363.5 protein_coding 42070763,42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42059796 42070830,42070366,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413 Gene ID= ENSG00000198951.11 TPM= 10.87 Transcript Type= protein_coding chr22 42059802 42070842 42059802 42070842 - ENST00000402937.1@NAGA ENST00000402937.1 protein_coding 42070763,42070282,42068439,42067765,42067113,42066710,42065738,42062827,42060924,42059802 42070842,42070373,42068574,42067936,42067290,42066804,42065899,42063024,42061067,42060413 Gene ID= ENSG00000198951.11 TPM= 10.87 Transcript Type= protein_coding chr22 42074251 42079441 42074251 42079441 + ENST00000321753.7@FAM109B ENST00000321753.7 protein_coding 42074251,42075571,42077280 42074341,42075652,42079441 Gene ID= ENSG00000177096.8 TPM= 10.87 Transcript Type= protein_coding chr22 42079691 42083353 42079691 42083353 + ENST00000422252.1@SMDT1 ENST00000422252.1 protein_coding 42079691,42081925,42083119 42079905,42082065,42083353 Gene ID= ENSG00000183172.8 TPM= 9.96 Transcript Type= nonsense_mediated_decay chr22 42079695 42084284 42079695 42084284 + ENST00000331479.3@SMDT1 ENST00000331479.3 protein_coding 42079695,42081925,42083119 42079954,42082065,42084284 Gene ID= ENSG00000183172.8 TPM= 115.91 Transcript Type= protein_coding chr22 42085527 42090758 42085527 42090758 - transcript2181.chr22.nnic@NDUFA6 transcript2181.chr22.nnic protein_coding 42090652,42087060,42085527 42090758,42087175,42086314 Gene ID= ENSG00000184983.9 TPM= 3.62 Transcript Type= NA chr22 42509968 42519802 42509968 42519802 - ENST00000323013.6@RRP7A ENST00000323013.6 protein_coding 42519714,42518005,42516011,42515151,42514682,42514106,42509968 42519802,42518147,42516136,42515268,42514779,42514304,42512995 Gene ID= ENSG00000189306.10 TPM= 106.85 Transcript Type= protein_coding chr22 42553919 42574382 42553919 42574382 + ENST00000327678.9@SERHL2 ENST00000327678.9 protein_coding 42553919,42554938,42555232,42555664,42556064,42556514,42558348,42560186,42566304,42571121,42572436,42573936 42554042,42555087,42555345,42555705,42556083,42556588,42558457,42560265,42566338,42571203,42572529,42574382 Gene ID= ENSG00000183569.17 TPM= 6.34 Transcript Type= protein_coding chr22 42555223 42582038 42555223 42582038 - ENST00000357802.6@RRP7BP ENST00000357802.6 transcribed_unprocessed_pseudogene 42581929,42580217,42577844,42576981,42576512,42575931,42574680,42555223 42582038,42580359,42577962,42577098,42576609,42576126,42574818,42556674 Gene ID= ENSG00000182841.12 TPM= 17.21 Transcript Type= processed_transcript chr22 42583721 42614962 42583721 42614962 - ENST00000252115.9@POLDIP3 ENST00000252115.9 protein_coding 42614799,42602770,42601970,42599698,42596186,42595537,42591955,42587506,42583721 42614962,42603160,42602056,42599793,42596365,42595614,42592084,42587572,42585968 Gene ID= ENSG00000100227.17 TPM= 183.67 Transcript Type= protein_coding chr22 42583721 42614931 42583721 42614931 - ENST00000348657.6@POLDIP3 ENST00000348657.6 protein_coding 42614799,42602770,42599698,42596186,42595537,42591955,42587506,42583721 42614931,42603160,42599793,42596365,42595614,42592084,42587572,42585968 Gene ID= ENSG00000100227.17 TPM= 12.52 Transcript Type= protein_coding chr22 42617847 42647168 42617847 42647168 - transcript2231.chr22.nic@CYB5R3 transcript2231.chr22.nic protein_coding 42646886,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42617847 42647168,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945 Gene ID= ENSG00000100243.20 TPM= 147.33 Transcript Type= NA chr22 42618808 42649568 42618808 42649568 - ENST00000352397.9@CYB5R3 ENST00000352397.9 protein_coding 42649295,42636715,42631378,42630882,42628152,42627605,42627304,42623789,42618808 42649568,42636846,42631450,42630988,42628281,42627688,42627389,42623888,42619945 Gene ID= ENSG00000100243.20 TPM= 1640.35 Transcript Type= protein_coding chr22 42692109 42720899 42692109 42720899 - transcript2255.chr22.nnic@A4GALT transcript2255.chr22.nnic protein_coding 42720797,42695491,42692109 42720899,42695631,42693997 Gene ID= ENSG00000128274.15 TPM= 25.06 Transcript Type= NA chr22 42692123 42720899 42692123 42720899 - transcript2257.chr22.nnic@A4GALT transcript2257.chr22.nnic protein_coding 42720797,42695575,42692123 42720899,42695631,42693997 Gene ID= ENSG00000128274.15 TPM= 4.23 Transcript Type= NA chr22 42692121 42695633 42692121 42695633 - ENST00000249005.2@A4GALT ENST00000249005.2 protein_coding 42695491,42692121 42695633,42693997 Gene ID= ENSG00000128274.15 TPM= 4.23 Transcript Type= protein_coding chr22 42796502 42857402 42796502 42857402 - ENST00000263245.9@ARFGAP3 ENST00000263245.9 protein_coding 42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42810813,42808767,42807073,42799039,42796502 42857402,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42810944,42808890,42807163,42799160,42797605 Gene ID= ENSG00000242247.10 TPM= 389.54 Transcript Type= protein_coding chr22 42796505 42857342 42796505 42857342 - transcript2263.chr22.nic@ARFGAP3 transcript2263.chr22.nic protein_coding 42857114,42847514,42840944,42835362,42834242,42831549,42826940,42823656,42822270,42817729,42817142,42808767,42807073,42799039,42796505 42857342,42847632,42841016,42835493,42834325,42831636,42826999,42823702,42822409,42817857,42817264,42808890,42807163,42799160,42797605 Gene ID= ENSG00000242247.10 TPM= 39.39 Transcript Type= NA chr22 42869775 43002476 42869775 43002476 - transcript2268.chr22.nic@PACSIN2 transcript2268.chr22.nic protein_coding 43002310,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869775 43002476,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469 Gene ID= ENSG00000100266.18 TPM= 16.93 Transcript Type= NA chr22 42869775 43015174 42869775 43015174 - transcript2274.chr22.nnic@PACSIN2 transcript2274.chr22.nnic protein_coding 43015021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869775 43015174,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469 Gene ID= ENSG00000100266.18 TPM= 13.31 Transcript Type= NA chr22 42869771 43015145 42869771 43015145 - ENST00000263246.7@PACSIN2 ENST00000263246.7 protein_coding 43015021,42912021,42893457,42890947,42888643,42884386,42882184,42879048,42876888,42876137,42869771 43015145,42912157,42893613,42891182,42888798,42884561,42882304,42879169,42877010,42876333,42871469 Gene ID= ENSG00000100266.18 TPM= 185.37 Transcript Type= protein_coding chr22 42856449 42879774 42856449 42879774 + transcript2278.chr22.nnic@NA transcript2278.chr22.nnic NA 42856449,42871275,42871985,42875196,42876178 42857222,42871503,42872085,42875285,42879774 Gene ID= novel_gene_chr22_2279 TPM= 1.81 Transcript Type= NA chr22 42857008 42875690 42857008 42875690 + transcript2281.chr22.nnic@NA transcript2281.chr22.nnic NA 42857008,42871275,42871985 42857222,42871503,42875690 Gene ID= novel_gene_chr22_2282 TPM= 4.53 Transcript Type= NA chr22 43039519 43089375 43039519 43089375 - transcript2285.chr22.nnic@TTLL1 transcript2285.chr22.nnic protein_coding 43089277,43086096,43079902,43075474,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039519 43089375,43086127,43079986,43075590,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905 Gene ID= ENSG00000100271.16 TPM= 3.17 Transcript Type= NA chr22 43039644 43089428 43039644 43089428 - ENST00000266254.11@TTLL1 ENST00000266254.11 protein_coding 43089277,43079902,43075474,43069636,43068410,43064190,43063813,43059384,43051801,43046410,43039644 43089428,43079986,43075590,43069844,43068590,43064324,43063921,43059527,43051887,43046573,43039905 Gene ID= ENSG00000100271.16 TPM= 16.75 Transcript Type= protein_coding chr22 43110748 43129712 43110748 43129712 + ENST00000216115.2@BIK ENST00000216115.2 protein_coding 43110748,43124016,43127697,43128496,43129213 43110803,43124183,43127795,43128625,43129712 Gene ID= ENSG00000100290.2 TPM= 5.43 Transcript Type= protein_coding chr22 43130800 43143385 43130800 43143385 - transcript2293.chr22.nnic@MCAT transcript2293.chr22.nnic protein_coding 43142892,43141162,43137081,43130800 43143385,43141249,43137298,43133486 Gene ID= ENSG00000100294.12 TPM= 1.81 Transcript Type= NA chr22 43132880 43143364 43132880 43143364 - ENST00000327555.5@MCAT ENST00000327555.5 protein_coding 43142926,43141162,43132880 43143364,43141249,43133486 Gene ID= ENSG00000100294.12 TPM= 8.15 Transcript Type= protein_coding chr22 43151547 43163241 43151547 43163241 + ENST00000583777.5@TSPO ENST00000583777.5 protein_coding 43151547,43161052,43162803 43151604,43161190,43163241 Gene ID= ENSG00000100300.17 TPM= 4.53 Transcript Type= protein_coding chr22 43151514 43163242 43151514 43163242 + ENST00000337554.7@TSPO ENST00000337554.7 protein_coding 43151514,43159210,43161052,43162803 43151604,43159420,43161190,43163242 Gene ID= ENSG00000100300.17 TPM= 305.17 Transcript Type= protein_coding chr22 43165912 43187183 43165912 43187183 - transcript2306.chr22.nnic@TTLL12 transcript2306.chr22.nnic protein_coding 43186893,43182980,43180742,43179841,43179619,43179128,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43165912 43187183,43183149,43180940,43180000,43179752,43179235,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159 Gene ID= ENSG00000100304.12 TPM= 8.6 Transcript Type= NA chr22 43166622 43187183 43166622 43187183 - transcript2308.chr22.nnic@TTLL12 transcript2308.chr22.nnic protein_coding 43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43167905,43166622 43187183,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159,43167190 Gene ID= ENSG00000100304.12 TPM= 6.79 Transcript Type= NA chr22 43166622 43187133 43166622 43187133 - ENST00000216129.6@TTLL12 ENST00000216129.6 protein_coding 43186893,43182980,43180742,43179841,43179619,43176320,43174499,43174209,43173715,43172403,43171819,43169500,43168774,43166622 43187133,43183149,43180940,43180000,43179752,43176396,43174615,43174403,43173826,43172554,43171900,43169568,43168912,43168159 Gene ID= ENSG00000100304.12 TPM= 249.02 Transcript Type= protein_coding chr22 43203224 43343388 43203224 43343388 - transcript2316.chr22.nic@SCUBE1 transcript2316.chr22.nic protein_coding 43343174,43339104,43319937,43291046,43262720,43258219,43255488,43238838,43231753,43229072,43227374,43223097,43222638,43221173,43220450,43218255,43214090,43212425,43210922,43210043,43208072,43207534,43203224 43343388,43339235,43320065,43291180,43262845,43258335,43255577,43238954,43231875,43229188,43227496,43223216,43222742,43221289,43220587,43218458,43214251,43212592,43211083,43210240,43208224,43207613,43204149 Gene ID= ENSG00000159307.18 TPM= 18.11 Transcript Type= NA chr22 43197283 43343388 43197283 43343388 - ENST00000360835.8@SCUBE1 ENST00000360835.8 protein_coding 43343174,43339104,43319937,43291046,43262720,43258219,43238838,43231753,43229072,43227374,43223097,43222638,43221173,43220450,43218255,43214090,43212425,43210922,43210043,43208072,43207534,43197283 43343388,43339235,43320065,43291180,43262845,43258335,43238954,43231875,43229188,43227496,43223216,43222742,43221289,43220587,43218458,43214251,43212592,43211083,43210240,43208224,43207613,43204149 Gene ID= ENSG00000159307.18 TPM= 25.36 Transcript Type= protein_coding chr22 43955421 43996533 43955421 43996533 + ENST00000350028.4@SAMM50 ENST00000350028.4 protein_coding 43955421,43963286,43964452,43968731,43972236,43972871,43973236,43976055,43976750,43977872,43981391,43983933,43989111,43990265,43996338 43955598,43963396,43964553,43968818,43972342,43973001,43973323,43976183,43976821,43977958,43981461,43984000,43989257,43990406,43996533 Gene ID= ENSG00000100347.14 TPM= 139.45 Transcript Type= protein_coding chr22 44181304 44206699 44181304 44206699 + transcript2336.chr22.nic@PARVG transcript2336.chr22.nic protein_coding 44181304,44181742,44183318,44185808,44187776,44189114,44190551,44192049,44193801,44196155,44196347,44198621,44205757,44206317 44181370,44181917,44183408,44185872,44187878,44189254,44190666,44192104,44193823,44196213,44196415,44198722,44205829,44206699 Gene ID= ENSG00000138964.16 TPM= 9.96 Transcript Type= NA chr22 44492572 44498298 44492572 44498298 - ENST00000341255.3@RTL6 ENST00000341255.3 protein_coding 44498044,44492572 44498298,44497811 Gene ID= ENSG00000188636.3 TPM= 24.45 Transcript Type= protein_coding chr22 44668739 44737681 44668739 44737681 + transcript2348.chr22.nic@PRR5 transcript2348.chr22.nic protein_coding 44668739,44702492,44714591,44725244,44726577,44731730,44732251,44736772 44668805,44702608,44714671,44725292,44726634,44731821,44732391,44737681 Gene ID= ENSG00000186654.20 TPM= 2.26 Transcript Type= NA chr22 44702198 44737681 44702198 44737681 + ENST00000336985.10@PRR5 ENST00000336985.10 protein_coding 44702198,44714591,44725244,44726577,44731730,44732251,44735027,44736772 44702608,44714671,44725292,44726634,44731821,44732391,44735162,44737681 Gene ID= ENSG00000186654.20 TPM= 5.89 Transcript Type= protein_coding chr22 45163917 45188007 45163917 45188007 + transcript2354.chr22.nic@NUP50 transcript2354.chr22.nic protein_coding 45163917,45166309,45168168,45171600,45175894,45178238,45181286,45183402,45184453 45164296,45166430,45168246,45171683,45176080,45178900,45181367,45183520,45188007 Gene ID= ENSG00000093000.18 TPM= 8.76 Transcript Type= NA chr22 45163988 45188007 45163988 45188007 + transcript2355.chr22.nic@NUP50 transcript2355.chr22.nic protein_coding 45163988,45168168,45170988,45171600,45175894,45178238,45181286,45183402,45184453 45164296,45168246,45171152,45171683,45176080,45178900,45181367,45183520,45188007 Gene ID= ENSG00000093000.18 TPM= 4.23 Transcript Type= NA chr22 45163841 45188015 45163841 45188015 + ENST00000347635.8@NUP50 ENST00000347635.8 protein_coding 45163841,45168168,45171600,45175894,45178238,45181286,45183402,45184453 45164296,45168246,45171683,45176080,45178900,45181367,45183520,45188015 Gene ID= ENSG00000093000.18 TPM= 52.22 Transcript Type= protein_coding chr22 45195828 45212488 45195828 45212488 - ENST00000251993.11@KIAA0930 ENST00000251993.11 protein_coding 45212265,45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45195828 45212488,45212107,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216 Gene ID= ENSG00000100364.18 TPM= 47.54 Transcript Type= protein_coding chr22 45196038 45212457 45196038 45212457 - ENST00000488038.5@KIAA0930 ENST00000488038.5 protein_coding 45211956,45205793,45205630,45205217,45203845,45202990,45199873,45197790,45196038 45212457,45205912,45205707,45205318,45203985,45203184,45200035,45197948,45197216 Gene ID= ENSG00000100364.18 TPM= 51.16 Transcript Type= retained_intron chr22 45211335 45212417 45211335 45212417 - ENST00000492273.1@KIAA0930 ENST00000492273.1 protein_coding 45212265,45211956,45211335 45212417,45212107,45211432 Gene ID= ENSG00000100364.18 TPM= 1.81 Transcript Type= protein_coding chr22 45309929 45329430 45309929 45329430 + transcript2380.chr22.nnic@FAM118A transcript2380.chr22.nnic protein_coding 45309929,45322371,45323175,45327842,45328332 45310183,45322426,45323427,45328003,45329430 Gene ID= ENSG00000100376.11 TPM= 1.81 Transcript Type= NA chr22 45502883 45563362 45502883 45563362 + ENST00000262722.11@FBLN1 ENST00000262722.11 protein_coding 45502883,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45562912 45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45563362 Gene ID= ENSG00000077942.18 TPM= 111.38 Transcript Type= protein_coding chr22 45502891 45601135 45502891 45601135 + ENST00000327858.10@FBLN1 ENST00000327858.10 protein_coding 45502891,45518682,45525543,45527847,45531265,45533063,45533761,45535200,45541229,45542155,45543401,45547085,45548613,45550492,45574511,45576977,45600307 45503064,45518787,45525678,45528009,45531324,45533164,45533898,45535337,45541372,45542283,45543526,45547204,45548744,45550615,45574653,45577108,45601135 Gene ID= ENSG00000077942.18 TPM= 207.37 Transcript Type= protein_coding chr22 45671799 45845307 45671799 45845307 + ENST00000252934.9@ATXN10 ENST00000252934.9 protein_coding 45671799,45689712,45692996,45700282,45702689,45718413,45729425,45738731,45740369,45806959,45842991,45843669 45672179,45689903,45693078,45700378,45702847,45718493,45729590,45738839,45740538,45807022,45843178,45845307 Gene ID= ENSG00000130638.16 TPM= 241.93 Transcript Type= protein_coding chr22 45671798 45845304 45671798 45845304 + ENST00000381061.8@ATXN10 ENST00000381061.8 protein_coding 45671798,45692996,45700282,45702689,45718413,45729425,45738731,45740369,45806959,45842991,45843669 45672179,45693078,45700378,45702847,45718493,45729590,45738839,45740538,45807022,45843178,45845304 Gene ID= ENSG00000130638.16 TPM= 1.97 Transcript Type= protein_coding chr22 46013606 46015498 46013606 46015498 + ENST00000608290.1@BX537318.1 ENST00000608290.1 lincRNA 46013606,46014497 46013810,46015498 Gene ID= ENSG00000273145.1 TPM= 1.81 Transcript Type= lincRNA chr22 46053705 46057210 46053705 46057210 + ENST00000416202.5@PRR34-AS1 ENST00000416202.5 antisense_RNA 46053705,46056847,46057062 46053920,46056945,46057210 Gene ID= ENSG00000241990.5 TPM= 13.58 Transcript Type= antisense_RNA chr22 46071715 46111638 46071715 46111638 + transcript2414.chr22.nnic@MIRLET7BHG transcript2414.chr22.nnic lincRNA 46071715,46097926,46098494,46109267,46109764 46072648,46098010,46098558,46109353,46111638 Gene ID= ENSG00000197182.14 TPM= 4.53 Transcript Type= NA chr22 46244013 46250679 46244013 46250679 - ENST00000314567.7@CDPF1 ENST00000314567.7 protein_coding 46250256,46248172,46247110,46244013 46250679,46248284,46247221,46245238 Gene ID= ENSG00000205643.10 TPM= 21.28 Transcript Type= protein_coding chr22 46244021 46250289 46244021 46250289 - ENST00000381037.4@CDPF1 ENST00000381037.4 protein_coding 46250256,46248172,46247110,46246673,46244021 46250289,46248284,46247221,46246795,46245238 Gene ID= ENSG00000205643.10 TPM= 1.36 Transcript Type= nonsense_mediated_decay chr22 46268018 46294006 46268018 46294006 + transcript2441.chr22.nic@TTC38 transcript2441.chr22.nic protein_coding 46268018,46268514,46272335,46273898,46275248,46278586,46281599,46281971,46283973,46285241,46287073,46288423,46289402,46289826,46292203,46292791 46268072,46268591,46272416,46274069,46275421,46278661,46281718,46282151,46284032,46285279,46287154,46288588,46289561,46289899,46292328,46294006 Gene ID= ENSG00000075234.16 TPM= 2.11 Transcript Type= NA chr22 46267961 46294006 46267961 46294006 + transcript2442.chr22.nic@TTC38 transcript2442.chr22.nic protein_coding 46267961,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292203,46292791 46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46292328,46294006 Gene ID= ENSG00000075234.16 TPM= 4.83 Transcript Type= NA chr22 46267964 46294008 46267964 46294008 + ENST00000381031.7@TTC38 ENST00000381031.7 protein_coding 46267964,46268514,46272335,46273898,46275248,46278586,46281599,46283973,46285241,46287073,46288423,46289402,46289826,46292791 46268072,46268591,46272416,46274069,46275421,46278661,46281718,46284032,46285279,46287154,46288588,46289561,46289899,46294008 Gene ID= ENSG00000075234.16 TPM= 57.35 Transcript Type= protein_coding chr22 46335425 46357340 46335425 46357340 + ENST00000290846.8@TRMU ENST00000290846.8 protein_coding 46335425,46337779,46343262,46346422,46350291,46352121,46352264,46353767,46355444,46355990,46356842 46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357340 Gene ID= ENSG00000100416.12 TPM= 25.58 Transcript Type= protein_coding chr22 46335425 46357337 46335425 46357337 + ENST00000457572.5@TRMU ENST00000457572.5 protein_coding 46335425,46337779,46343262,46346422,46350346,46352121,46352264,46353767,46355444,46355990,46356842 46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337 Gene ID= ENSG00000100416.12 TPM= 2.94 Transcript Type= nonsense_mediated_decay chr22 46335691 46357340 46335691 46357340 + transcript2456.chr22.nic@TRMU transcript2456.chr22.nic protein_coding 46335691,46337779,46343262,46346422,46350346,46352121,46352264,46353767,46355444,46356842 46335846,46337944,46343368,46346544,46350463,46352174,46352330,46353867,46356072,46357340 Gene ID= ENSG00000100416.12 TPM= 1.81 Transcript Type= NA chr22 46335425 46357337 46335425 46357337 + ENST00000381021.7@TRMU ENST00000381021.7 protein_coding 46335425,46337779,46346422,46350291,46352121,46352264,46353767,46355444,46355990,46356842 46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337 Gene ID= ENSG00000100416.12 TPM= 2.04 Transcript Type= nonsense_mediated_decay chr22 46335425 46357337 46335425 46357337 + ENST00000453630.5@TRMU ENST00000453630.5 protein_coding 46335425,46337779,46346422,46350346,46352121,46352264,46353767,46355444,46355990,46356842 46335846,46337944,46346544,46350463,46352174,46352330,46353867,46355588,46356072,46357337 Gene ID= ENSG00000100416.12 TPM= 3.85 Transcript Type= nonsense_mediated_decay chr22 46577063 46679790 46577063 46679790 + transcript2480.chr22.nic@GRAMD4 transcript2480.chr22.nic protein_coding 46577063,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147 46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679790 Gene ID= ENSG00000075240.16 TPM= 74.73 Transcript Type= NA chr22 46577063 46679787 46577063 46679787 + transcript2482.chr22.nnic@GRAMD4 transcript2482.chr22.nnic protein_coding 46577063,46626751,46637840,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677576 46577290,46626961,46637960,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679787 Gene ID= ENSG00000075240.16 TPM= 6.52 Transcript Type= NA chr22 46577063 46679790 46577063 46679790 + transcript2490.chr22.nic@GRAMD4 transcript2490.chr22.nic protein_coding 46577063,46626751,46637840,46658187,46661381,46663040,46663838,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147 46577290,46626961,46637960,46658307,46661442,46663172,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679790 Gene ID= ENSG00000075240.16 TPM= 6.97 Transcript Type= NA chr22 46649819 46679790 46649819 46679790 + transcript2497.chr22.nnic@GRAMD4 transcript2497.chr22.nnic protein_coding 46649819,46658187,46661381,46663040,46663838,46664026,46665615,46666825,46668096,46668689,46668799,46672843,46673670,46674657,46675468,46676600,46677147 46650013,46658307,46661442,46663172,46663863,46664117,46665706,46666873,46668167,46668732,46668908,46672997,46673814,46674750,46675552,46676668,46679790 Gene ID= ENSG00000075240.16 TPM= 12.7 Transcript Type= NA chr22 46684411 46738304 46684411 46738304 - transcript2500.chr22.nnic@CERK transcript2500.chr22.nnic protein_coding 46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46687103,46684411 46738304,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206,46686639 Gene ID= ENSG00000100422.13 TPM= 4.53 Transcript Type= NA chr22 46684411 46738261 46684411 46738261 - ENST00000216264.12@CERK ENST00000216264.12 protein_coding 46738007,46720902,46720086,46712168,46711086,46707843,46701636,46699313,46695210,46693427,46691572,46689992,46684411 46738261,46721015,46720208,46712293,46711149,46707988,46701710,46699465,46695315,46693503,46691777,46690200,46687206 Gene ID= ENSG00000100422.13 TPM= 84.22 Transcript Type= protein_coding chr22 46762626 46976197 46762626 46976197 + transcript2510.chr22.nnic@TBC1D22A transcript2510.chr22.nnic protein_coding 46762626,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46975836 46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46976197 Gene ID= ENSG00000054611.13 TPM= 2.72 Transcript Type= NA chr22 46762621 47175693 46762621 47175693 + ENST00000337137.8@TBC1D22A ENST00000337137.8 protein_coding 46762621,46792520,46793501,46797444,46878653,46891266,46894784,46912074,46974290,46997634,47037071,47111508,47173498 46762848,46792576,46793841,46797620,46878723,46891394,46894846,46912188,46974399,46997709,47037198,47111603,47175693 Gene ID= ENSG00000054611.13 TPM= 42.56 Transcript Type= protein_coding chr22 49047481 49052422 49047481 49052422 . transcript2512.chr22.nnic@NA transcript2512.chr22.nnic NA 49047481,49049395,49050356 49048949,49049463,49052422 Gene ID= novel_gene_chr22_2513 TPM= 1.81 Transcript Type= NA chr22 49773284 49827944 49773284 49827944 - transcript2519.chr22.nic@BRD1 transcript2519.chr22.nic protein_coding 49827497,49822951,49804204,49798988,49798558,49797805,49794034,49787390,49777678,49777034,49776050,49775591,49773284 49827944,49824331,49804360,49799119,49798686,49798117,49794294,49787494,49777813,49777161,49776159,49775745,49774416 Gene ID= ENSG00000100425.18 TPM= 18.11 Transcript Type= NA chr22 49853842 49890078 49853842 49890078 + ENST00000216268.5@ZBED4 ENST00000216268.5 protein_coding 49853842,49883334 49853989,49890078 Gene ID= ENSG00000100426.6 TPM= 5.43 Transcript Type= protein_coding chr22 49903219 49918297 49903219 49918297 - transcript2527.chr22.nic@ALG12 transcript2527.chr22.nic protein_coding 49918263,49913604,49913385,49910434,49909894,49909244,49907721,49904337,49904179,49903219 49918297,49913843,49913517,49910607,49910088,49909347,49907944,49904506,49904254,49903879 Gene ID= ENSG00000182858.13 TPM= 2.72 Transcript Type= NA chr22 49918205 49927538 49918205 49927538 + transcript2526.chr22.nic@CRELD2 transcript2526.chr22.nic protein_coding 49918205,49918759,49919230,49919730,49920156,49921585,49922612,49923234,49924360,49925417,49927255 49918430,49918898,49919312,49919840,49920247,49921761,49922707,49923317,49924455,49925557,49927538 Gene ID= ENSG00000184164.14 TPM= 2.72 Transcript Type= NA chr22 49918625 49927538 49918625 49927538 + transcript2535.chr22.nic@CRELD2 transcript2535.chr22.nic protein_coding 49918625,49919230,49919730,49920156,49921585,49922612,49923234,49925417,49927255 49918898,49919312,49919840,49920247,49921761,49922707,49924455,49925557,49927538 Gene ID= ENSG00000184164.14 TPM= 3.62 Transcript Type= NA chr22 49918625 49927538 49918625 49927538 + transcript2537.chr22.nic@CRELD2 transcript2537.chr22.nic protein_coding 49918625,49919230,49919730,49920156,49921585,49922612,49923234,49927255 49918898,49919312,49919840,49920247,49921761,49922707,49925557,49927538 Gene ID= ENSG00000184164.14 TPM= 2.72 Transcript Type= NA chr22 49918696 49927528 49918696 49927528 + ENST00000328268.8@CRELD2 ENST00000328268.8 protein_coding 49918696,49919230,49919730,49920156,49921585,49922612,49923234,49924360,49925417,49927255 49918898,49919312,49919840,49920247,49921761,49922707,49923317,49924455,49925557,49927528 Gene ID= ENSG00000184164.14 TPM= 38.03 Transcript Type= protein_coding chr22 49960428 49964077 49960428 49964077 + transcript2544.chr22.nic@PIM3 transcript2544.chr22.nic protein_coding 49960428,49961125,49961318,49961442,49962940 49961032,49961234,49961368,49962865,49964077 Gene ID= ENSG00000198355.4 TPM= 12.68 Transcript Type= NA chr22 49960513 49964080 49960513 49964080 + ENST00000360612.4@PIM3 ENST00000360612.4 protein_coding 49960513,49961125,49961318,49961442,49962689,49962940 49961032,49961234,49961368,49961811,49962865,49964080 Gene ID= ENSG00000198355.4 TPM= 247.21 Transcript Type= protein_coding chr22 50185909 50199599 50185909 50199599 + transcript2551.chr22.nnic@TRABD transcript2551.chr22.nnic protein_coding 50185909,50193027,50193576,50194340,50194900,50197241,50197437,50197823,50198075,50198345 50185976,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199599 Gene ID= ENSG00000170638.9 TPM= 3.12 Transcript Type= NA chr22 50185902 50199599 50185902 50199599 + transcript2558.chr22.nic@TRABD transcript2558.chr22.nic protein_coding 50185902,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345 50185976,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199599 Gene ID= ENSG00000170638.9 TPM= 10.37 Transcript Type= NA chr22 50185918 50199595 50185918 50199595 + ENST00000463233.1@TRABD ENST00000463233.1 protein_coding 50185918,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198345 50186001,50193093,50193654,50194506,50195040,50197351,50197588,50198186,50199595 Gene ID= ENSG00000170638.9 TPM= 17.61 Transcript Type= retained_intron chr22 50185917 50199598 50185917 50199598 + ENST00000303434.8@TRABD ENST00000303434.8 protein_coding 50185917,50193027,50193576,50194340,50194900,50197241,50197449,50197823,50198075,50198345 50186001,50193093,50193654,50194506,50195040,50197351,50197588,50197995,50198186,50199598 Gene ID= ENSG00000170638.9 TPM= 21.24 Transcript Type= protein_coding chr22 50199090 50200837 50199090 50200837 - ENST00000608025.2@AL022328.4 ENST00000608025.2 antisense_RNA 50200076,50199090 50200837,50199328 Gene ID= ENSG00000273253.2 TPM= 3.62 Transcript Type= antisense_RNA chr22 50200997 50217617 50200997 50217617 + transcript2579.chr22.nnic@SELENOO transcript2579.chr22.nnic protein_coding 50200997,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205 50201590,50206462,50208716,50210311,50210911,50215867,50216876,50217128,50217617 Gene ID= ENSG00000073169.13 TPM= 11.05 Transcript Type= NA chr22 50200997 50217617 50200997 50217617 + transcript2580.chr22.nic@SELENOO transcript2580.chr22.nic protein_coding 50200997,50206317,50208488,50210181,50210631,50215717,50216691,50216972,50217205 50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217617 Gene ID= ENSG00000073169.13 TPM= 9.24 Transcript Type= NA chr22 50200979 50217616 50200979 50217616 + ENST00000380903.6@SELENOO ENST00000380903.6 protein_coding 50200979,50206317,50208536,50210181,50210631,50215717,50216691,50216972,50217205 50201590,50206520,50208716,50210311,50210911,50215867,50216876,50217128,50217616 Gene ID= ENSG00000073169.13 TPM= 187.63 Transcript Type= protein_coding chr22 50201011 50217617 50201011 50217617 + transcript2586.chr22.nnic@SELENOO transcript2586.chr22.nnic protein_coding 50201011,50204919,50206317,50210181,50210631,50215717,50216691,50216972,50217205 50201590,50205024,50208716,50210311,50210911,50215867,50216876,50217128,50217617 Gene ID= ENSG00000073169.13 TPM= 6.34 Transcript Type= NA chr22 50200997 50217617 50200997 50217617 + transcript2591.chr22.nic@SELENOO transcript2591.chr22.nic protein_coding 50200997,50206317,50210181,50210631,50215717,50216691,50216972,50217205 50201590,50208716,50210311,50210911,50215867,50216876,50217128,50217617 Gene ID= ENSG00000073169.13 TPM= 9.96 Transcript Type= NA chr22 50217689 50245030 50217689 50245030 - transcript2603.chr22.nnic@TUBGCP6 transcript2603.chr22.nnic protein_coding 50243719,50240204,50233316,50229404,50227907,50226999,50226733,50226287,50226050,50225794,50224511,50224332,50224141,50222454,50222028,50219957,50219644,50219288,50219068,50218703,50218488,50218189,50217918,50217689 50245030,50240367,50233526,50229577,50228028,50227077,50226842,50226378,50226189,50225943,50224592,50224420,50224256,50222592,50222102,50220015,50219791,50219456,50219209,50218897,50218620,50218402,50218117,50217827 Gene ID= ENSG00000128159.11 TPM= 2.64 Transcript Type= NA chr22 50217689 50245030 50217689 50245030 - transcript2604.chr22.nic@TUBGCP6 transcript2604.chr22.nic protein_coding 50243719,50240204,50233316,50229404,50227907,50226999,50226733,50226287,50226050,50225794,50224511,50224332,50224141,50222454,50222028,50219957,50219644,50219288,50219068,50218703,50218488,50218189,50217918,50217689 50245030,50240367,50233526,50229577,50228028,50227077,50226842,50226378,50226189,50225943,50224592,50224420,50224256,50222592,50222102,50221874,50219791,50219456,50219209,50218897,50218620,50218402,50218117,50217827 Gene ID= ENSG00000128159.11 TPM= 8.08 Transcript Type= NA chr22 50217689 50245030 50217689 50245030 - transcript2607.chr22.nic@TUBGCP6 transcript2607.chr22.nic protein_coding 50243719,50240204,50233316,50229404,50227907,50226999,50226733,50226287,50226050,50225794,50224511,50224332,50224141,50222454,50222028,50220251,50219957,50219644,50219288,50219068,50218703,50218488,50217918,50217689 50245030,50240367,50233526,50229577,50228028,50227077,50226842,50226378,50226189,50225943,50224592,50224420,50224256,50222592,50222102,50221874,50220015,50219791,50219456,50219209,50218897,50218620,50218402,50217827 Gene ID= ENSG00000128159.11 TPM= 6.57 Transcript Type= NA chr22 50217694 50226189 50217694 50226189 - ENST00000491449.5@TUBGCP6 ENST00000491449.5 protein_coding 50226050,50225794,50224511,50224332,50224141,50222454,50222028,50219957,50219644,50219288,50219068,50218703,50218488,50218189,50217918,50217694 50226189,50225943,50224592,50224420,50224256,50222592,50222102,50221874,50219791,50219456,50219209,50218897,50218620,50218402,50218117,50217827 Gene ID= ENSG00000128159.11 TPM= 7.17 Transcript Type= processed_transcript chr22 50245184 50251385 50245184 50251385 - transcript2615.chr22.nic@HDAC10 transcript2615.chr22.nic protein_coding 50250974,50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245184 50251385,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245736,50245530 Gene ID= ENSG00000100429.17 TPM= 1.92 Transcript Type= NA chr22 50245183 50251385 50245183 50251385 - ENST00000216271.9@HDAC10 ENST00000216271.9 protein_coding 50250974,50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245183 50251385,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 23.21 Transcript Type= protein_coding chr22 50245184 50251324 50245184 50251324 - transcript2617.chr22.nic@HDAC10 transcript2617.chr22.nic protein_coding 50251102,50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245184 50251324,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 5.1 Transcript Type= NA chr22 50245184 50251295 50245184 50251295 - transcript2618.chr22.nnic@HDAC10 transcript2618.chr22.nnic protein_coding 50251137,50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245184 50251295,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 3.29 Transcript Type= NA chr22 50245184 50251290 50245184 50251290 - transcript2622.chr22.nic@HDAC10 transcript2622.chr22.nic protein_coding 50250771,50250427,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245184 50251290,50250523,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 2.38 Transcript Type= NA chr22 50245186 50251405 50245186 50251405 - ENST00000626012.2@HDAC10 ENST00000626012.2 protein_coding 50250974,50250771,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245186 50251405,50250905,50250160,50249964,50249703,50249454,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 3.29 Transcript Type= protein_coding chr22 50245184 50251266 50245184 50251266 - transcript2625.chr22.nic@HDAC10 transcript2625.chr22.nic protein_coding 50251102,50250771,50250063,50249860,50249635,50249328,50249103,50248831,50248662,50248366,50248225,50247890,50247692,50246875,50246679,50246298,50245910,50245675,50245184 50251266,50250905,50250160,50249964,50249703,50249516,50249168,50248890,50248751,50248472,50248292,50248145,50247776,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 2.2 Transcript Type= NA chr22 50245184 50251395 50245184 50251395 - transcript2632.chr22.nic@HDAC10 transcript2632.chr22.nic protein_coding 50251102,50250771,50250427,50250063,50249860,50249635,50249328,50248831,50248662,50248366,50248225,50247890,50246875,50246679,50246298,50245910,50245675,50245184 50251395,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248751,50248472,50248292,50248145,50246966,50246735,50246376,50246092,50245827,50245530 Gene ID= ENSG00000100429.17 TPM= 2.06 Transcript Type= NA chr22 50245184 50251263 50245184 50251263 - transcript2644.chr22.nic@HDAC10 transcript2644.chr22.nic protein_coding 50251102,50250771,50250427,50250063,50249860,50249635,50249328,50248831,50248662,50248225,50247890,50246875,50246679,50246298,50245675,50245184 50251263,50250905,50250523,50250160,50249964,50249703,50249454,50249168,50248751,50248472,50248145,50247776,50246735,50246376,50246092,50245530 Gene ID= ENSG00000100429.17 TPM= 1.81 Transcript Type= NA chr22 50252903 50261825 50252903 50261825 - ENST00000215659.12@MAPK12 ENST00000215659.12 protein_coding 50261385,50261167,50258243,50257082,50256935,50256599,50256085,50255810,50255615,50255453,50255197,50252903 50261825,50261296,50258301,50257193,50256964,50256646,50256199,50255881,50255694,50255531,50255370,50253480 Gene ID= ENSG00000188130.13 TPM= 5.43 Transcript Type= protein_coding chr22 50274975 50307766 50274975 50307766 - transcript2667.chr22.nnic@PLXNB2 transcript2667.chr22.nnic protein_coding 50307553,50295377,50294719,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274975 50307766,50295429,50294778,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808 Gene ID= ENSG00000196576.14 TPM= 102.82 Transcript Type= NA chr22 50274975 50307686 50274975 50307686 - transcript2687.chr22.nnic@PLXNB2 transcript2687.chr22.nnic protein_coding 50307553,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274975 50307686,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808 Gene ID= ENSG00000196576.14 TPM= 52.11 Transcript Type= NA chr22 50274979 50307572 50274979 50307572 - ENST00000359337.8@PLXNB2 ENST00000359337.8 protein_coding 50307553,50294719,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274979 50307572,50294778,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808 Gene ID= ENSG00000196576.14 TPM= 44.57 Transcript Type= protein_coding chr22 50274979 50307627 50274979 50307627 - ENST00000449103.5@PLXNB2 ENST00000449103.5 protein_coding 50307553,50294726,50289517,50288960,50288743,50287937,50287667,50287111,50286173,50285990,50285800,50284573,50284132,50283833,50283602,50283337,50283050,50282711,50282184,50281854,50281566,50281360,50281089,50280744,50280489,50280005,50279630,50278855,50278596,50278435,50278117,50277853,50277591,50276842,50276629,50275889,50274979 50307627,50294778,50290597,50289142,50288871,50288037,50287793,50287264,50286287,50286098,50285901,50284665,50284213,50283990,50283750,50283445,50283186,50282881,50282313,50282081,50281742,50281499,50281189,50280973,50280670,50280071,50279776,50279011,50278696,50278519,50278271,50278013,50277738,50276906,50276704,50275963,50275808 Gene ID= ENSG00000196576.14 TPM= 69.02 Transcript Type= protein_coding chr22 50311963 50326967 50311963 50326967 - transcript2760.chr22.nic@DENND6B transcript2760.chr22.nic protein_coding 50326812,50318965,50318847,50317908,50317293,50316566,50316370,50316174,50316025,50315714,50314799,50314605,50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50311963 50326967,50319003,50318889,50318020,50317373,50316626,50316475,50316253,50316087,50315769,50314921,50314700,50314494,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261 Gene ID= ENSG00000205593.11 TPM= 1.81 Transcript Type= NA chr22 50311963 50327412 50311963 50327412 - transcript2762.chr22.nic@DENND6B transcript2762.chr22.nic protein_coding 50326812,50318965,50318847,50317908,50317293,50316566,50316370,50316174,50316025,50315714,50314799,50314605,50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50311963 50327412,50319003,50318889,50318020,50317373,50316712,50316475,50316253,50316087,50315769,50314921,50314700,50314494,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261 Gene ID= ENSG00000205593.11 TPM= 14.49 Transcript Type= NA chr22 50311963 50327354 50311963 50327354 - transcript2769.chr22.nnic@DENND6B transcript2769.chr22.nnic protein_coding 50326812,50318965,50318847,50317908,50317293,50316370,50316174,50315714,50314799,50314605,50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50311963 50327354,50319003,50318889,50318020,50317373,50316475,50316253,50315769,50314921,50314700,50314494,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261 Gene ID= ENSG00000205593.11 TPM= 1.81 Transcript Type= NA chr22 50309030 50327060 50309030 50327060 - ENST00000413817.7@DENND6B ENST00000413817.7 protein_coding 50326812,50318965,50318847,50317908,50317293,50316370,50316174,50316025,50315714,50314799,50314605,50314400,50314207,50313814,50313635,50313446,50312999,50312523,50312343,50309030 50327060,50319003,50318889,50318020,50317373,50316475,50316253,50316087,50315769,50314921,50314700,50314494,50314272,50313878,50313724,50313499,50313108,50312625,50312417,50312261 Gene ID= ENSG00000205593.11 TPM= 11.77 Transcript Type= protein_coding chr22 50343298 50445087 50343298 50445087 + transcript2716.chr22.nnic@PPP6R2 transcript2716.chr22.nnic protein_coding 50343298,50372020,50388986,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199 50343550,50372150,50389111,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445087 Gene ID= ENSG00000100239.15 TPM= 9.78 Transcript Type= NA chr22 50343298 50445087 50343298 50445087 + transcript2736.chr22.nnic@PPP6R2 transcript2736.chr22.nnic protein_coding 50343298,50372020,50393893,50406735,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199 50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445087 Gene ID= ENSG00000100239.15 TPM= 4.35 Transcript Type= NA chr22 50343317 50445090 50343317 50445090 + ENST00000612753.4@PPP6R2 ENST00000612753.4 protein_coding 50343317,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50436988,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199 50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437068,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50445090 Gene ID= ENSG00000100239.15 TPM= 84.03 Transcript Type= protein_coding chr22 50343331 50444374 50343331 50444374 + ENST00000395744.7@PPP6R2 ENST00000395744.7 protein_coding 50343331,50372020,50393893,50406689,50414552,50416092,50418867,50419349,50422254,50423462,50431173,50432265,50434966,50436367,50437506,50437843,50438174,50438599,50439701,50439961,50440822,50443866,50444199 50343550,50372150,50394135,50406875,50414689,50416157,50418979,50419462,50422380,50423614,50431382,50432329,50435081,50436452,50437603,50437900,50438298,50438762,50439857,50440049,50441026,50444117,50444374 Gene ID= ENSG00000100239.15 TPM= 8.15 Transcript Type= protein_coding chr22 50444336 50475052 50444336 50475052 - transcript2710.chr22.nic@SBF1 transcript2710.chr22.nic protein_coding 50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50444336 50475052,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240 Gene ID= ENSG00000100241.20 TPM= 9.96 Transcript Type= NA chr22 50445000 50475024 50445000 50475024 - ENST00000380817.7@SBF1 ENST00000380817.7 protein_coding 50474786,50468376,50467786,50467532,50467338,50466605,50466350,50466150,50465961,50465763,50465215,50465001,50464819,50464534,50464329,50463283,50462870,50462559,50462205,50461947,50461796,50461523,50461159,50460534,50460272,50459952,50459470,50459255,50457034,50456492,50456216,50455481,50455224,50455016,50454814,50454512,50448543,50448233,50447522,50447322,50445000 50475024,50468461,50467923,50467690,50467448,50466710,50466482,50466258,50466074,50465840,50465328,50465129,50464917,50464738,50464441,50463432,50462938,50462717,50462473,50462119,50461869,50461718,50461286,50460712,50460408,50460159,50459666,50459392,50457111,50456673,50456395,50455582,50455409,50455142,50454944,50454742,50448650,50448444,50447609,50447453,50447240 Gene ID= ENSG00000100241.20 TPM= 87.84 Transcript Type= protein_coding chr22 50481556 50486440 50481556 50486440 + ENST00000395738.2@ADM2 ENST00000395738.2 protein_coding 50481556,50482567 50481957,50486440 Gene ID= ENSG00000128165.8 TPM= 1.81 Transcript Type= protein_coding chr22 50502948 50507750 50502948 50507750 - transcript2777.chr22.nnic@LMF2 transcript2777.chr22.nnic protein_coding 50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502948 50507750,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504434,50503904,50503699 Gene ID= ENSG00000100258.17 TPM= 12.94 Transcript Type= NA chr22 50502948 50507750 50502948 50507750 - transcript2786.chr22.nic@LMF2 transcript2786.chr22.nic protein_coding 50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504340,50503808,50502948 50507750,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50503904,50503699 Gene ID= ENSG00000100258.17 TPM= 9.77 Transcript Type= NA chr22 50502949 50507691 50502949 50507691 - ENST00000474879.6@LMF2 ENST00000474879.6 protein_coding 50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502949 50507691,50507035,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699 Gene ID= ENSG00000100258.17 TPM= 201.37 Transcript Type= protein_coding chr22 50502951 50507684 50502951 50507684 - ENST00000216080.5@LMF2 ENST00000216080.5 protein_coding 50507582,50506782,50506638,50506285,50506035,50505674,50505403,50505229,50505057,50504802,50504559,50504340,50503808,50502951 50507684,50507120,50506666,50506502,50506213,50505815,50505537,50505334,50505153,50504984,50504727,50504451,50503904,50503699 Gene ID= ENSG00000100258.17 TPM= 23.88 Transcript Type= protein_coding chr22 50523568 50525606 50523568 50525606 - ENST00000395693.7@SCO2 ENST00000395693.7 protein_coding 50525472,50523568 50525606,50524424 Gene ID= ENSG00000130489.14 TPM= 50.71 Transcript Type= protein_coding chr22 50525752 50530056 50525752 50530056 - ENST00000252029.7@TYMP ENST00000252029.7 protein_coding 50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752 50530056,50529719,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918 Gene ID= ENSG00000025708.13 TPM= 82.11 Transcript Type= protein_coding chr22 50525755 50529996 50525755 50529996 - ENST00000487577.5@TYMP ENST00000487577.5 protein_coding 50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525755 50529996,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918 Gene ID= ENSG00000025708.13 TPM= 16 Transcript Type= retained_intron chr22 50525756 50530032 50525756 50530032 - ENST00000395678.7@TYMP ENST00000395678.7 protein_coding 50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525756 50530032,50529731,50529338,50528610,50527717,50527283,50526738,50526476,50526141,50525918 Gene ID= ENSG00000025708.13 TPM= 21.13 Transcript Type= protein_coding chr22 50525752 50530015 50525752 50530015 - ENST00000395681.5@TYMP ENST00000395681.5 protein_coding 50529904,50529496,50529136,50528512,50527588,50527165,50526576,50526246,50526001,50525752 50530015,50529719,50529338,50528610,50527717,50527283,50526738,50526476,50526156,50525918 Gene ID= ENSG00000025708.13 TPM= 2.11 Transcript Type= protein_coding chr22 50527792 50530012 50527792 50530012 - ENST00000487162.1@TYMP ENST00000487162.1 protein_coding 50529904,50527792 50530012,50529731 Gene ID= ENSG00000025708.13 TPM= 3.62 Transcript Type= retained_intron chr22 50568862 50578417 50568862 50578417 - ENST00000312108.11@CPT1B ENST00000312108.11 protein_coding 50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569336,50568862 50578417,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081 Gene ID= ENSG00000205560.12 TPM= 11.77 Transcript Type= protein_coding chr22 50569084 50578455 50569084 50578455 - ENST00000395650.6@CPT1B ENST00000395650.6 protein_coding 50578386,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569084 50578455,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421 Gene ID= ENSG00000205560.12 TPM= 9.06 Transcript Type= protein_coding chr22 50568862 50582859 50568862 50582859 - transcript2805.chr22.nic@CHKB-CPT1B transcript2805.chr22.nic protein_coding 50582249,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50579036,50578549,50577775,50577324,50576857,50576536,50576198,50576035,50574493,50574335,50573520,50572875,50572203,50572006,50571375,50571158,50570891,50570293,50569576,50569336,50568862 50582859,50581862,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255,50578659,50577934,50577463,50577034,50576637,50576335,50576112,50574600,50574419,50573715,50573060,50572308,50572122,50571539,50571292,50571043,50570406,50569668,50569421,50569081 Gene ID= ENSG00000254413.8 TPM= 16.3 Transcript Type= NA chr22 50578958 50583002 50578958 50583002 - transcript2838.chr22.nic@CHKB transcript2838.chr22.nic protein_coding 50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578958 50583002,50581553,50580660,50580416,50580271,50580082,50579802,50579507,50579255 Gene ID= ENSG00000100288.19 TPM= 10.31 Transcript Type= NA chr22 50578958 50583001 50578958 50583001 - transcript2843.chr22.nic@CHKB transcript2843.chr22.nic protein_coding 50582249,50581749,50581420,50580565,50580190,50579974,50579727,50579426,50578958 50583001,50581862,50581553,50580660,50580416,50580082,50579830,50579507,50579255 Gene ID= ENSG00000100288.19 TPM= 11.03 Transcript Type= NA chr22 50578958 50582855 50578958 50582855 - transcript2852.chr22.nic@CHKB transcript2852.chr22.nic protein_coding 50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578958 50582855,50580660,50580416,50580271,50580082,50579830,50579507,50579255 Gene ID= ENSG00000100288.19 TPM= 7.59 Transcript Type= NA chr22 50578959 50582854 50578959 50582854 - ENST00000492582.5@CHKB ENST00000492582.5 protein_coding 50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578959 50582854,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255 Gene ID= ENSG00000100288.19 TPM= 36.87 Transcript Type= retained_intron chr22 50578966 50582820 50578966 50582820 - ENST00000479003.5@CHKB ENST00000479003.5 protein_coding 50581749,50581420,50580565,50580190,50579974,50579727,50579426,50578966 50582820,50581553,50580660,50580416,50580082,50579830,50579507,50579255 Gene ID= ENSG00000100288.19 TPM= 15.74 Transcript Type= retained_intron chr22 50578963 50582845 50578963 50582845 - ENST00000481673.5@CHKB ENST00000481673.5 protein_coding 50582558,50581749,50581420,50580565,50580358,50580190,50579974,50579727,50579426,50578963 50582845,50582357,50581553,50580660,50580416,50580271,50580082,50579830,50579507,50579255 Gene ID= ENSG00000100288.19 TPM= 1.38 Transcript Type= retained_intron chr22 50600651 50611550 50600651 50611550 + transcript2822.chr22.nnic@MAPK8IP2 transcript2822.chr22.nnic protein_coding 50600651,50601789,50603223,50603626,50603973,50605368,50605562,50605825,50606658,50606921,50610212,50610707 50600883,50601894,50603498,50603719,50605064,50605443,50605734,50605934,50606765,50606991,50610310,50611550 Gene ID= ENSG00000008735.13 TPM= 4.98 Transcript Type= NA chr22 50600685 50611551 50600685 50611551 + ENST00000329492.5@MAPK8IP2 ENST00000329492.5 protein_coding 50600685,50601789,50603223,50603626,50603841,50605368,50605562,50605825,50606658,50606921,50610212,50610707 50600883,50601894,50603498,50603719,50605064,50605443,50605734,50605934,50606765,50606991,50610310,50611551 Gene ID= ENSG00000008735.13 TPM= 63.84 Transcript Type= protein_coding chr22 50625018 50628170 50625018 50628170 - ENST00000356098.9@ARSA ENST00000356098.9 protein_coding 50627946,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018 50628170,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 31.51 Transcript Type= protein_coding chr22 50625011 50628183 50625011 50628183 - transcript2870.chr22.nnic@ARSA transcript2870.chr22.nnic protein_coding 50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625011 50628183,50627406,50627052,50626742,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 3.06 Transcript Type= NA chr22 50625011 50628183 50625011 50628183 - transcript2875.chr22.nic@ARSA transcript2875.chr22.nic protein_coding 50627556,50626834,50626591,50626154,50625936,50625579,50625011 50628183,50627406,50626760,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 5.03 Transcript Type= NA chr22 50625018 50628172 50625018 50628172 - ENST00000216124.9@ARSA ENST00000216124.9 protein_coding 50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625018 50628172,50627406,50627052,50626760,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 55.96 Transcript Type= protein_coding chr22 50625029 50628173 50625029 50628173 - ENST00000453344.6@ARSA ENST00000453344.6 protein_coding 50627946,50627166,50626834,50626591,50626154,50625936,50625579,50625029 50628173,50627406,50627052,50626760,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 5.25 Transcript Type= protein_coding chr22 50625033 50628159 50625033 50628159 - ENST00000395619.3@ARSA ENST00000395619.3 protein_coding 50627991,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625033 50628159,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 3.72 Transcript Type= protein_coding chr22 50625028 50628155 50625028 50628155 - ENST00000395621.7@ARSA ENST00000395621.7 protein_coding 50627898,50627556,50627166,50626834,50626591,50626154,50625936,50625579,50625028 50628155,50627792,50627406,50627052,50626760,50626278,50626063,50625681,50625464 Gene ID= ENSG00000100299.17 TPM= 4.35 Transcript Type= protein_coding chr22 50674642 50733210 50674642 50733210 + ENST00000262795.5@SHANK3 ENST00000262795.5 protein_coding 50674642,50675048,50676622,50678585,50678769,50679019,50679312,50683340,50684585,50694775,50695928,50696904,50697244,50697565,50698690,50703860,50704166,50704738,50704964,50706072,50711615,50714917,50715669,50720184,50730721 50674704,50675251,50676693,50678693,50678920,50679186,50679428,50683417,50684651,50695048,50695932,50696914,50697267,50697715,50698803,50703935,50704248,50704862,50705096,50706152,50711638,50715047,50715753,50722437,50733210 Gene ID= ENSG00000251322.7 TPM= 13.58 Transcript Type= protein_coding chr22 50767492 50783671 50767492 50783671 - transcript2883.chr22.nic@RABL2B transcript2883.chr22.nic protein_coding 50783039,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767492 50783671,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874 Gene ID= ENSG00000079974.17 TPM= 3.2 Transcript Type= NA chr22 50767492 50783650 50767492 50783650 - transcript2890.chr22.nic@RABL2B transcript2890.chr22.nic protein_coding 50782188,50777952,50776670,50775772,50769455,50769041,50767492 50783650,50777981,50776749,50775851,50770016,50769124,50768874 Gene ID= ENSG00000079974.17 TPM= 1.81 Transcript Type= NA chr22 50767506 50783659 50767506 50783659 - ENST00000395598.7@RABL2B ENST00000395598.7 protein_coding 50783501,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767506 50783659,50782347,50777981,50776749,50775851,50770016,50769549,50769124,50768874 Gene ID= ENSG00000079974.17 TPM= 6.52 Transcript Type= protein_coding chr22 50767506 50783663 50767506 50783663 - ENST00000395595.7@RABL2B ENST00000395595.7 protein_coding 50783501,50783039,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767506 50783663,50783286,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874 Gene ID= ENSG00000079974.17 TPM= 4.1 Transcript Type= protein_coding chr22 50767504 50783621 50767504 50783621 - ENST00000354869.7@RABL2B ENST00000354869.7 protein_coding 50783501,50782188,50777952,50776670,50775772,50769905,50769455,50769041,50767504 50783621,50782351,50777981,50776749,50775851,50770016,50769552,50769124,50768874 Gene ID= ENSG00000079974.17 TPM= 3.2 Transcript Type= protein_coding chr22 50767530 50783638 50767530 50783638 - ENST00000436958.5@RABL2B ENST00000436958.5 protein_coding 50783501,50782188,50777952,50776670,50775772,50769425,50769041,50767530 50783638,50782351,50777981,50776749,50775851,50769552,50769124,50768874 Gene ID= ENSG00000079974.17 TPM= 1.99 Transcript Type= nonsense_mediated_decay chr22 50783748 50790605 50783748 50790605 + transcript2895.chr22.nnic@RPL23AP82 transcript2895.chr22.nnic transcribed_unprocessed_pseudogene 50783748,50785173,50788895 50783864,50785293,50790605 Gene ID= ENSG00000184319.15 TPM= 1.81 Transcript Type= NA chr22 50783785 50799433 50783785 50799433 + transcript2897.chr22.nic@RPL23AP82 transcript2897.chr22.nic transcribed_unprocessed_pseudogene 50783785,50785173,50798655 50784021,50785293,50799433 Gene ID= ENSG00000184319.15 TPM= 4.98 Transcript Type= NA chr22 50783757 50799434 50783757 50799434 + ENST00000462238.5@RPL23AP82 ENST00000462238.5 transcribed_unprocessed_pseudogene 50783757,50785173,50798655 50783864,50785293,50799434 Gene ID= ENSG00000184319.15 TPM= 14.94 Transcript Type= processed_transcript chrX 304750 318819 304750 318819 - ENST00000326153.9@GTPBP6 ENST00000326153.9 protein_coding 318439,316914,315229,314890,314150,312766,311419,307732,307360,304750 318819,317051,315299,315020,314217,312924,311627,307880,307512,305197 Gene ID= ENSG00000178605.13 TPM= 47.09 Transcript Type= protein_coding chrX 1336616 1382685 1336616 1382685 + ENST00000331035.9@IL3RA ENST00000331035.9 protein_coding 1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391 1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685 Gene ID= ENSG00000185291.11 TPM= 2.72 Transcript Type= protein_coding chrX 1403139 1453762 1403139 1453762 - ENST00000534940.6@ASMTL ENST00000534940.6 protein_coding 1453618,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403139 1453762,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489 Gene ID= ENSG00000169093.15 TPM= 1.81 Transcript Type= protein_coding chrX 1403141 1452873 1403141 1452873 - ENST00000381317.8@ASMTL ENST00000381317.8 protein_coding 1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141 1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489 Gene ID= ENSG00000169093.15 TPM= 32.6 Transcript Type= protein_coding chrX 1591593 1602514 1591593 1602514 + ENST00000313871.8@AKAP17A ENST00000313871.8 protein_coding 1591593,1593444,1595384,1599192,1600659 1591769,1594224,1595532,1599432,1602514 Gene ID= ENSG00000197976.11 TPM= 47.99 Transcript Type= protein_coding chrX 1591623 1602502 1591623 1602502 + ENST00000474361.6@AKAP17A ENST00000474361.6 protein_coding 1591623,1593444,1595384,1599192,1600138,1600659 1591769,1594224,1595532,1599432,1600207,1602502 Gene ID= ENSG00000197976.11 TPM= 28.98 Transcript Type= nonsense_mediated_decay chrX 2219516 2500978 2219516 2500978 - ENST00000334651.10@DHRSX ENST00000334651.10 protein_coding 2500817,2425197,2408745,2291502,2266740,2243023,2219516 2500978,2425304,2408813,2291603,2266947,2243230,2221229 Gene ID= ENSG00000169084.13 TPM= 40.75 Transcript Type= protein_coding chrX 2691313 2741290 2691313 2741290 + ENST00000624481.4@CD99 ENST00000624481.4 protein_coding 2691313,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738203,2740779 2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741290 Gene ID= ENSG00000002586.18 TPM= 26.26 Transcript Type= protein_coding chrX 2903970 2929351 2903970 2929351 - ENST00000381154.5@ARSD ENST00000381154.5 protein_coding 2929232,2925616,2921903,2920601,2917804,2915556,2910659,2909817,2908721,2903970 2929351,2925765,2922024,2920723,2918227,2915692,2910793,2909979,2908842,2907632 Gene ID= ENSG00000006756.15 TPM= 22.64 Transcript Type= protein_coding chrX 3308228 3320956 3308228 3320956 - transcript27.chrX.nic@MXRA5 transcript27.chrX.nic protein_coding 3320008,3317103,3308228 3320956,3318003,3311624 Gene ID= ENSG00000101825.7 TPM= 9.96 Transcript Type= NA chrX 3817530 3843932 3817530 3843932 - transcript36.chrX.nnic@BX890604.1 transcript36.chrX.nnic lincRNA 3843341,3828506,3818442,3817530 3843932,3829392,3818500,3817778 Gene ID= ENSG00000205664.10 TPM= 3.62 Transcript Type= NA chrX 7048920 7148190 7048920 7148190 - ENST00000381077.9@PUDP ENST00000381077.9 protein_coding 7148053,7105620,7077220,7048920 7148190,7105838,7077449,7050472 Gene ID= ENSG00000130021.13 TPM= 26.26 Transcript Type= protein_coding chrX 7147722 7353061 7147722 7353061 + transcript40.chrX.nnic@STS transcript40.chrX.nnic protein_coding 7147722,7190880,7253196,7257242,7257466,7259349,7275951,7305046,7325339,7333986,7349888 7148083,7191008,7253336,7257363,7257588,7259772,7276087,7305183,7325498,7334107,7353061 Gene ID= ENSG00000101846.6 TPM= 5.43 Transcript Type= NA chrX 7898247 7927443 7898247 7927443 - ENST00000381042.8@PNPLA4 ENST00000381042.8 protein_coding 7927286,7925940,7922004,7921713,7912028,7901989,7898247 7927443,7926132,7922098,7921848,7912093,7902141,7900817 Gene ID= ENSG00000006757.11 TPM= 28.07 Transcript Type= protein_coding chrX 9464995 9719741 9464995 9719741 + transcript57.chrX.nic@TBL1X transcript57.chrX.nic protein_coding 9464995,9501780,9640273,9654215,9684043,9688017,9691579,9692113,9693149,9693322,9697369,9704993,9709248,9709633,9711611,9714902,9716220 9465447,9501849,9640360,9654322,9684188,9688275,9691711,9692254,9693212,9693419,9697429,9705114,9709322,9709760,9711776,9715003,9719741 Gene ID= ENSG00000101849.15 TPM= 8.6 Transcript Type= NA chrX 9465008 9719743 9465008 9719743 + ENST00000217964.11@TBL1X ENST00000217964.11 protein_coding 9465008,9501780,9640273,9653545,9654215,9684043,9688017,9691579,9692113,9693149,9693322,9697369,9704993,9709248,9709633,9711611,9714902,9716220 9465447,9501849,9640360,9653689,9654322,9684188,9688275,9691711,9692254,9693212,9693419,9697429,9705114,9709322,9709760,9711776,9715003,9719743 Gene ID= ENSG00000101849.15 TPM= 17.66 Transcript Type= protein_coding chrX 9725407 9786310 9725407 9786310 - transcript58.chrX.nic@GPR143 transcript58.chrX.nic protein_coding 9786242,9760717,9759332,9748574,9746044,9743565,9741338,9739485,9725407 9786310,9760826,9759426,9748666,9746153,9743673,9741455,9739719,9725840 Gene ID= ENSG00000101850.12 TPM= 1.81 Transcript Type= NA chrX 9786456 9949443 9786456 9949443 + ENST00000380913.7@SHROOM2 ENST00000380913.7 protein_coding 9786456,9873652,9890977,9894358,9898190,9932175,9937134,9939195,9944641,9946671 9786710,9873803,9891108,9896698,9898290,9932870,9937685,9939366,9944913,9949443 Gene ID= ENSG00000146950.12 TPM= 1.81 Transcript Type= protein_coding chrX 10098379 10144469 10098379 10144469 + transcript67.chrX.nic@WWC3 transcript67.chrX.nic protein_coding 10098379,10109778,10116418,10117124,10122619,10124265,10125024,10126114,10127988,10128557,10129956,10134432,10136633,10138709,10139413,10141435 10098579,10110020,10116507,10117689,10122739,10124339,10125110,10126306,10128161,10128708,10130121,10134596,10136725,10138936,10139540,10144469 Gene ID= ENSG00000047644.18 TPM= 1.81 Transcript Type= NA chrX 10015562 10144478 10015562 10144478 + ENST00000380861.8@WWC3 ENST00000380861.8 protein_coding 10015562,10063445,10067287,10078799,10079725,10090771,10094132,10098506,10109778,10116418,10117124,10122619,10124265,10125024,10126114,10127988,10128557,10129956,10134432,10136633,10138709,10139413,10141435 10015858,10063554,10067490,10078875,10079804,10090900,10094281,10098579,10110020,10116507,10117689,10122739,10124339,10125110,10126306,10128161,10128708,10130121,10134596,10136725,10138936,10139540,10144478 Gene ID= ENSG00000047644.18 TPM= 13.58 Transcript Type= protein_coding chrX 10445310 10620634 10445310 10620634 - ENST00000317552.8@MID1 ENST00000317552.8 protein_coding 10620290,10566888,10523092,10495584,10482480,10474623,10469697,10459646,10454870,10445310 10620634,10567603,10523187,10495691,10482628,10474750,10469840,10459807,10455077,10449716 Gene ID= ENSG00000101871.14 TPM= 2.72 Transcript Type= protein_coding chrX 11111342 11121879 11111342 11121879 + ENST00000380763.7@HCCS ENST00000380763.7 protein_coding 11111342,11112019,11114835,11117267,11118501,11120907,11121612 11111423,11112160,11114986,11117415,11118620,11120993,11121879 Gene ID= ENSG00000004961.14 TPM= 1.36 Transcript Type= protein_coding chrX 11111365 11121879 11111365 11121879 + ENST00000380762.4@HCCS ENST00000380762.4 protein_coding 11111365,11112019,11114835,11117267,11118501,11120907,11121612 11111518,11112160,11114986,11117415,11118620,11120993,11121879 Gene ID= ENSG00000004961.14 TPM= 7.7 Transcript Type= protein_coding chrX 11137543 11427773 11137543 11427773 - ENST00000380736.5@ARHGAP6 ENST00000380736.5 protein_coding 11427548,11254548,11196925,11188728,11186236,11182063,11179302,11178100,11169505,11156529,11143980,11142233,11137543 11427773,11254707,11196996,11188984,11186431,11182118,11179452,11178248,11169684,11156626,11144248,11142313,11139530 Gene ID= ENSG00000047648.21 TPM= 1.81 Transcript Type= protein_coding chrX 11758159 11775753 11758159 11775753 + ENST00000312196.8@MSL3 ENST00000312196.8 protein_coding 11758159,11759793,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980 11758365,11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775753 Gene ID= ENSG00000005302.17 TPM= 5.43 Transcript Type= protein_coding chrX 11759552 11775751 11759552 11775751 + ENST00000380693.7@MSL3 ENST00000380693.7 protein_coding 11759552,11760403,11760837,11761500,11762130,11762837,11763780,11765467,11768573,11772156,11772621,11774980 11759875,11760498,11760937,11761582,11762252,11762997,11763938,11765729,11768682,11772255,11772705,11775751 Gene ID= ENSG00000005302.17 TPM= 2.72 Transcript Type= protein_coding chrX 12975108 12977227 12975108 12977227 + ENST00000451311.6@TMSB4X ENST00000451311.6 protein_coding 12975108,12976246,12976777 12975168,12976361,12977227 Gene ID= ENSG00000205542.10 TPM= 4485.17 Transcript Type= protein_coding chrX 12975110 12977226 12975110 12977226 + ENST00000380636.1@TMSB4X ENST00000380636.1 protein_coding 12975110,12976777 12976361,12977226 Gene ID= ENSG00000205542.10 TPM= 16.3 Transcript Type= protein_coding chrX 13653188 13665404 13653188 13665404 + transcript93.chrX.nnic@TCEANC transcript93.chrX.nnic protein_coding 13653188,13655289,13659652,13661031,13662501 13653312,13655373,13659768,13661122,13665404 Gene ID= ENSG00000176896.8 TPM= 4.53 Transcript Type= NA chrX 13712242 13734617 13712242 13734617 - transcript111.chrX.nic@TRAPPC2 transcript111.chrX.nic protein_coding 13734525,13734044,13720428,13719871,13716534,13716004,13712242 13734617,13734185,13720497,13719982,13716678,13716089,13714505 Gene ID= ENSG00000196459.13 TPM= 3.92 Transcript Type= NA chrX 13712244 13734635 13712244 13734635 - ENST00000359680.9@TRAPPC2 ENST00000359680.9 protein_coding 13734525,13719871,13716534,13716004,13712244 13734635,13719982,13716678,13716089,13714505 Gene ID= ENSG00000196459.13 TPM= 20.22 Transcript Type= protein_coding chrX 13712247 13734556 13712247 13734556 - ENST00000380579.5@TRAPPC2 ENST00000380579.5 protein_coding 13734525,13734044,13719871,13716534,13716004,13712247 13734556,13734185,13719982,13716678,13716089,13714505 Gene ID= ENSG00000196459.13 TPM= 4.83 Transcript Type= protein_coding chrX 13734718 13769222 13734718 13769222 + transcript104.chrX.nic@OFD1 transcript104.chrX.nic protein_coding 13734718,13735248,13736478,13738846,13739002,13744415,13746319,13746780,13749427,13751249,13753368,13755151,13756578,13757660,13758337,13760115,13761085,13762344,13767127,13768054,13768718,13769066 13735083,13735346,13736678,13738914,13739032,13744519,13746455,13746953,13749533,13751368,13753441,13755242,13756767,13757790,13758448,13760720,13761211,13762444,13767284,13768224,13768785,13769222 Gene ID= ENSG00000046651.14 TPM= 2.72 Transcript Type= NA chrX 14006727 14029916 14006727 14029916 - transcript118.chrX.nnic@GEMIN8 transcript118.chrX.nnic protein_coding 14029777,14026140,14021464,14020078,14008871,14006727 14029916,14026221,14021511,14020534,14009169,14007870 Gene ID= ENSG00000046647.13 TPM= 2.72 Transcript Type= NA chrX 14006728 14029916 14006728 14029916 - transcript119.chrX.nic@GEMIN8 transcript119.chrX.nic protein_coding 14029777,14026140,14021464,14020078,14006728 14029916,14026221,14021511,14020534,14009169 Gene ID= ENSG00000046647.13 TPM= 19.92 Transcript Type= NA chrX 14008673 14029893 14008673 14029893 - ENST00000398355.7@GEMIN8 ENST00000398355.7 protein_coding 14029777,14021464,14020078,14008673 14029893,14021511,14020534,14009169 Gene ID= ENSG00000046647.13 TPM= 10.87 Transcript Type= protein_coding chrX 14873441 14922327 14873441 14922327 + ENST00000380492.7@MOSPD2 ENST00000380492.7 protein_coding 14873441,14873689,14892723,14895308,14897084,14900575,14902966,14908860,14911237,14912249,14914503,14915668,14916197,14918680,14919672 14873537,14873758,14892878,14895394,14897238,14900635,14903004,14908984,14911413,14912361,14914599,14915764,14916326,14918782,14922327 Gene ID= ENSG00000130150.11 TPM= 4.53 Transcript Type= protein_coding chrX 15345591 15384376 15345591 15384376 - ENST00000297904.3@VEGFD ENST00000297904.3 protein_coding 15383857,15363109,15358003,15355150,15353068,15347164,15345591 15384376,15363319,15358193,15355298,15353168,15347359,15346259 Gene ID= ENSG00000165197.4 TPM= 18.11 Transcript Type= protein_coding chrX 15384799 15493564 15384799 15493564 - ENST00000380421.3@PIR ENST00000380421.3 protein_coding 15493156,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799 15493564,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116 Gene ID= ENSG00000087842.10 TPM= 1.81 Transcript Type= protein_coding chrX 15384799 15493341 15384799 15493341 - ENST00000380420.9@PIR ENST00000380420.9 protein_coding 15493190,15491162,15479729,15459657,15455848,15425906,15407506,15397449,15390185,15384799 15493341,15491309,15479821,15459740,15456054,15425990,15407550,15397531,15390251,15385116 Gene ID= ENSG00000087842.10 TPM= 19.02 Transcript Type= protein_coding chrX 15790465 15823257 15790465 15823257 + transcript141.chrX.nnic@ZRSR2 transcript141.chrX.nnic protein_coding 15790465,15790934,15799883,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731 15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823257 Gene ID= ENSG00000169249.12 TPM= 1.81 Transcript Type= NA chrX 15790472 15823260 15790472 15823260 + ENST00000307771.7@ZRSR2 ENST00000307771.7 protein_coding 15790472,15790934,15799872,15803688,15804111,15808233,15809200,15815677,15818587,15820207,15822731 15790536,15791013,15799953,15803796,15804197,15808271,15809318,15815890,15818642,15820316,15823260 Gene ID= ENSG00000169249.12 TPM= 5.43 Transcript Type= protein_coding chrX 15825806 15854931 15825806 15854931 - ENST00000329235.6@AP1S2 ENST00000329235.6 protein_coding 15854688,15852346,15845903,15845379,15825806 15854931,15852524,15846011,15845516,15827372 Gene ID= ENSG00000182287.14 TPM= 34.41 Transcript Type= protein_coding chrX 15830060 15854818 15830060 15854818 - transcript148.chrX.nic@AP1S2 transcript148.chrX.nic protein_coding 15854688,15852346,15845903,15845379,15830060 15854818,15852524,15846011,15845516,15831568 Gene ID= ENSG00000182287.14 TPM= 2.72 Transcript Type= NA chrX 16587999 16712698 16587999 16712698 - transcript157.chrX.nnic@CTPS2 transcript157.chrX.nnic protein_coding 16712558,16702737,16698923,16698236,16693371,16693141,16691540,16689450,16683094,16678362,16670580,16667662,16667514,16639147,16620277,16617150,16609541,16590752,16587999 16712698,16702941,16699093,16698336,16693487,16693224,16691620,16689601,16683226,16678450,16670674,16667724,16667557,16639243,16620332,16617246,16609685,16590862,16589775 Gene ID= ENSG00000047230.14 TPM= 8.15 Transcript Type= NA chrX 16580095 16712671 16580095 16712671 - transcript159.chrX.nnic@CTPS2 transcript159.chrX.nnic protein_coding 16712335,16702737,16698923,16698236,16693371,16693141,16691540,16689450,16683094,16678362,16670580,16667662,16667514,16639147,16620277,16617150,16609541,16580095 16712671,16702941,16699093,16698336,16693487,16693224,16691620,16689601,16683226,16678450,16670674,16667724,16667557,16639243,16620332,16617246,16609685,16580409 Gene ID= ENSG00000047230.14 TPM= 1.81 Transcript Type= NA chrX 16719632 16765336 16719632 16765336 + ENST00000380155.3@SYAP1 ENST00000380155.3 protein_coding 16719632,16735227,16736166,16741716,16743701,16754945,16756663,16757162,16760232 16719899,16735345,16736232,16741789,16743840,16755093,16756721,16757309,16765336 Gene ID= ENSG00000169895.5 TPM= 171.15 Transcript Type= protein_coding chrX 16786427 16844519 16786427 16844519 + ENST00000380122.9@TXLNG ENST00000380122.9 protein_coding 16786427,16818574,16820164,16828094,16829576,16832623,16834283,16837593,16839821,16841428 16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685,16839916,16844519 Gene ID= ENSG00000086712.12 TPM= 27.62 Transcript Type= protein_coding chrX 16786429 16837952 16786429 16837952 + transcript185.chrX.nnic@TXLNG transcript185.chrX.nnic protein_coding 16786429,16818574,16820164,16828094,16829576,16832623,16834283,16837593,16837805 16786589,16818877,16820255,16828264,16829770,16832742,16834357,16837685,16837952 Gene ID= ENSG00000086712.12 TPM= 2.26 Transcript Type= NA chrX 16844341 16870414 16844341 16870414 - ENST00000380087.6@RBBP7 ENST00000380087.6 protein_coding 16870038,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844341 16870414,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103 Gene ID= ENSG00000102054.17 TPM= 504.04 Transcript Type= protein_coding chrX 16844654 16869886 16844654 16869886 - ENST00000380084.8@RBBP7 ENST00000380084.8 protein_coding 16869494,16869076,16862955,16858676,16857594,16853682,16852749,16852551,16852046,16849244,16845828,16844654 16869886,16869220,16863100,16858849,16857709,16853842,16852875,16852628,16852122,16849301,16845938,16845103 Gene ID= ENSG00000102054.17 TPM= 26.53 Transcript Type= protein_coding chrX 16946656 17147799 16946656 17147799 + transcript204.chrX.nnic@REPS2 transcript204.chrX.nnic protein_coding 16946656,17006221,17022123,17025059,17029526,17047347,17052382,17054808,17062438,17068402,17069940,17103718,17133824,17135261,17138856,17147413 16947134,17006344,17022271,17025185,17029623,17047482,17052445,17054950,17062532,17068471,17069993,17103779,17133907,17135406,17138961,17147799 Gene ID= ENSG00000169891.17 TPM= 7.24 Transcript Type= NA chrX 17737468 17754985 17737468 17754985 + ENST00000380045.7@SCML1 ENST00000380045.7 protein_coding 17737468,17746018,17749400,17749894,17751815,17753258 17737680,17746098,17749504,17750293,17751966,17754985 Gene ID= ENSG00000047634.14 TPM= 15.39 Transcript Type= protein_coding chrX 17800052 17860910 17800052 17860910 - transcript214.chrX.nnic@RAI2 transcript214.chrX.nnic protein_coding 17860509,17801876,17800052 17860910,17802034,17801584 Gene ID= ENSG00000131831.17 TPM= 2.72 Transcript Type= NA chrX 17800051 17861337 17800051 17861337 - ENST00000451717.5@RAI2 ENST00000451717.5 protein_coding 17861098,17800051 17861337,17802034 Gene ID= ENSG00000131831.17 TPM= 6.34 Transcript Type= protein_coding chrX 18239312 18354420 18239312 18354420 - transcript219.chrX.nnic@SCML2 transcript219.chrX.nnic protein_coding 18354254,18334050,18330587,18324907,18323859,18320332,18304972,18265585,18260171,18258044,18256848,18247769,18246577,18242439,18239312 18354420,18334095,18330655,18324977,18324093,18320420,18305215,18265802,18260291,18258247,18257030,18247882,18246828,18242590,18241379 Gene ID= ENSG00000102098.17 TPM= 1.81 Transcript Type= NA chrX 18239314 18354727 18239314 18354727 - ENST00000251900.8@SCML2 ENST00000251900.8 protein_coding 18354592,18334050,18330587,18324907,18323859,18320332,18304972,18265585,18260171,18258044,18256848,18247769,18246577,18242439,18239314 18354727,18334095,18330655,18324977,18324093,18320420,18305215,18265802,18260291,18258247,18257030,18247882,18246828,18242590,18241379 Gene ID= ENSG00000102098.17 TPM= 1.81 Transcript Type= protein_coding chrX 18892972 18984386 18892972 18984386 - transcript224.chrX.nnic@PHKA2 transcript224.chrX.nnic protein_coding 18983855,18954254,18952494,18951104,18948744,18945078,18943710,18941529,18939995,18938627,18936055,18931641,18929228,18926453,18925668,18924381,18924056,18920032,18918681,18910872,18908801,18907900,18907018,18906736,18906495,18905758,18901485,18900670,18899149,18897163,18895138,18894204,18892972 18984386,18954412,18952541,18951272,18948826,18945158,18943808,18941675,18940048,18938749,18936150,18931748,18929306,18926587,18925777,18924525,18924134,18920201,18918854,18910960,18908934,18908056,18907097,18906814,18906624,18905859,18901603,18900699,18899226,18897333,18895191,18894404,18893655 Gene ID= ENSG00000044446.11 TPM= 4.98 Transcript Type= NA chrX 18892296 18984390 18892296 18984390 - transcript228.chrX.nic@PHKA2 transcript228.chrX.nic protein_coding 18983855,18954254,18952494,18951104,18948744,18945078,18943710,18941529,18939995,18938627,18936055,18931641,18929228,18926453,18925668,18924381,18924056,18920032,18918681,18910872,18908801,18907900,18907018,18906736,18906495,18905758,18901485,18897163,18895138,18894204,18892296 18984390,18954412,18952541,18951272,18948826,18945158,18943808,18941675,18940048,18938749,18936150,18931748,18929306,18926587,18925777,18924525,18924134,18920201,18918854,18910960,18908934,18908056,18907097,18906814,18906624,18905859,18901603,18897333,18895191,18894404,18893655 Gene ID= ENSG00000044446.11 TPM= 6.79 Transcript Type= NA chrX 19343893 19361705 19343893 19361705 + ENST00000379806.9@PDHA1 ENST00000379806.9 protein_coding 19343893,19346510,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489 19344094,19346623,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705 Gene ID= ENSG00000131828.13 TPM= 3.92 Transcript Type= protein_coding chrX 19343893 19361705 19343893 19361705 + ENST00000545074.5@PDHA1 ENST00000545074.5 protein_coding 19343893,19349312,19349937,19351260,19353082,19354491,19355349,19355686,19357652,19358916,19359489 19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361705 Gene ID= ENSG00000131828.13 TPM= 3.92 Transcript Type= protein_coding chrX 19343903 19359851 19343903 19359851 + transcript257.chrX.nic@PDHA1 transcript257.chrX.nic protein_coding 19343903,19349312,19349937,19351281,19355349,19355686,19357652,19358916,19359489 19344094,19349371,19350110,19354583,19355504,19355757,19357719,19359024,19359851 Gene ID= ENSG00000131828.13 TPM= 4.53 Transcript Type= NA chrX 19343933 19361685 19343933 19361685 + ENST00000422285.6@PDHA1 ENST00000422285.6 protein_coding 19343933,19349312,19349937,19351281,19353082,19354491,19355349,19355686,19357652,19358916,19359489 19344094,19349371,19350110,19351407,19353173,19354583,19355504,19355757,19357719,19359024,19361685 Gene ID= ENSG00000131828.13 TPM= 135.23 Transcript Type= protein_coding chrX 19359749 19515464 19359749 19515464 - transcript242.chrX.nnic@MAP3K15 transcript242.chrX.nnic protein_coding 19514901,19488828,19486482,19466666,19464213,19459985,19456913,19431438,19426231,19425531,19415107,19413357,19409924,19407188,19400576,19398226,19395081,19392343,19392002,19380120,19374477,19373536,19372653,19371345,19370959,19369054,19362738,19361493,19361339,19359749 19515464,19488967,19486505,19466698,19464406,19460153,19457019,19431608,19426343,19425690,19415257,19413464,19409973,19407283,19400663,19398359,19395208,19392473,19392107,19380277,19374660,19373695,19372827,19371530,19371064,19369219,19362850,19361593,19361415,19360833 Gene ID= ENSG00000180815.14 TPM= 18.56 Transcript Type= NA chrX 19354300 19515522 19354300 19515522 - transcript245.chrX.nnic@MAP3K15 transcript245.chrX.nnic protein_coding 19514901,19488828,19486482,19464213,19459985,19456913,19431438,19426231,19425531,19415107,19413357,19409924,19407188,19400576,19398226,19395081,19392343,19392002,19380120,19374477,19373536,19372653,19371345,19370959,19369054,19362738,19361493,19361339,19354300 19515522,19488967,19486505,19464406,19460153,19457019,19431608,19426343,19425690,19415257,19413464,19409973,19407283,19400663,19398359,19395208,19392473,19392107,19380277,19374660,19373695,19372827,19371530,19371064,19369219,19362850,19361593,19361415,19354519 Gene ID= ENSG00000180815.14 TPM= 10.87 Transcript Type= NA chrX 19533975 19887601 19533975 19887601 - ENST00000397821.7@SH3KBP1 ENST00000397821.7 protein_coding 19887307,19836125,19746318,19706881,19695612,19683823,19645400,19631864,19607938,19594949,19592067,19588643,19569103,19549974,19545922,19541925,19537717,19533975 19887601,19836282,19746441,19706984,19695741,19684028,19645475,19631958,19608045,19595000,19592147,19588802,19569188,19550083,19546050,19542193,19537780,19536458 Gene ID= ENSG00000147010.17 TPM= 93.27 Transcript Type= protein_coding chrX 20124518 20141844 20124518 20141844 - ENST00000379607.9@EIF1AX ENST00000379607.9 protein_coding 20141625,20138539,20135738,20133957,20132182,20130516,20124518 20141844,20138622,20135841,20134007,20132263,20130607,20128311 Gene ID= ENSG00000173674.10 TPM= 76.07 Transcript Type= protein_coding chrX 20154305 20267928 20154305 20267928 - transcript273.chrX.nnic@RPS6KA3 transcript273.chrX.nnic protein_coding 20267800,20241593,20240569,20234758,20209288,20204022,20195065,20194189,20193487,20188497,20187828,20186296,20176996,20176434,20176250,20175164,20172746,20169402,20167589,20164899,20162964,20161644,20156109,20154305 20267928,20241686,20240605,20234814,20209404,20204103,20195145,20194268,20193593,20188534,20187970,20186366,20177084,20176498,20176352,20175288,20172871,20169491,20167747,20165060,20163040,20161761,20156249,20155520 Gene ID= ENSG00000177189.12 TPM= 1.81 Transcript Type= NA chrX 20154822 20218876 20154822 20218876 - transcript279.chrX.nic@RPS6KA3 transcript279.chrX.nic protein_coding 20218800,20209288,20204022,20195065,20194189,20193487,20188497,20187828,20186296,20176996,20176434,20176250,20175164,20172746,20169402,20167589,20164899,20162964,20161644,20156109,20154822 20218876,20209404,20204103,20195145,20194268,20193593,20188534,20187970,20186366,20177084,20176498,20176352,20175288,20172871,20169491,20167747,20165060,20163040,20161761,20156249,20155520 Gene ID= ENSG00000177189.12 TPM= 2.72 Transcript Type= NA chrX 20149911 20266840 20149911 20266840 - ENST00000379565.7@RPS6KA3 ENST00000379565.7 protein_coding 20266564,20234758,20209288,20204022,20195065,20194189,20193487,20188497,20187828,20186296,20176996,20176434,20176250,20175164,20172746,20169402,20167589,20164899,20162964,20161644,20156109,20149911 20266840,20234814,20209404,20204103,20195145,20194268,20193593,20188534,20187970,20186366,20177084,20176498,20176352,20175288,20172871,20169491,20167747,20165060,20163040,20161761,20156249,20155520 Gene ID= ENSG00000177189.12 TPM= 12.68 Transcript Type= protein_coding chrX 21839598 21885432 21839598 21885432 + transcript284.chrX.nnic@MBTPS2 transcript284.chrX.nnic protein_coding 21839598,21843170,21845171,21851509,21853376,21878042,21878497,21880897,21882433 21839809,21843318,21845384,21851612,21853503,21878136,21878692,21880972,21885432 Gene ID= ENSG00000012174.11 TPM= 2.72 Transcript Type= NA chrX 21839636 21885424 21839636 21885424 + ENST00000379484.9@MBTPS2 ENST00000379484.9 protein_coding 21839636,21843170,21845171,21851509,21853376,21868467,21869498,21878042,21878497,21880897,21882433 21839809,21843318,21845384,21851612,21853503,21868585,21869678,21878136,21878692,21880972,21885424 Gene ID= ENSG00000012174.11 TPM= 49.8 Transcript Type= protein_coding chrX 21940573 21994835 21940573 21994835 + ENST00000404933.6@SMS ENST00000404933.6 protein_coding 21940573,21967196,21971897,21972507,21977061,21977960,21978877,21984304,21985144,21992597,21994312 21940873,21967316,21971990,21972571,21977236,21978114,21978966,21984418,21985223,21992712,21994835 Gene ID= ENSG00000102172.15 TPM= 200.58 Transcript Type= protein_coding chrX 23667446 23686399 23667446 23686399 + ENST00000379341.8@PRDX4 ENST00000379341.8 protein_coding 23667446,23671529,23674990,23679165,23682396,23683671,23686285 23667811,23671646,23675106,23679287,23682526,23683705,23686399 Gene ID= ENSG00000123131.12 TPM= 196.5 Transcript Type= protein_coding chrX 23702253 23743273 23702253 23743273 - ENST00000379303.9@ACOT9 ENST00000379303.9 protein_coding 23743125,23735919,23734341,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23702253 23743273,23736016,23734367,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982 Gene ID= ENSG00000123130.16 TPM= 27.62 Transcript Type= protein_coding chrX 23703671 23743276 23703671 23743276 - ENST00000336430.11@ACOT9 ENST00000336430.11 protein_coding 23743125,23735919,23733172,23730816,23730527,23722670,23721881,23713135,23707877,23706628,23705768,23705509,23704993,23704694,23703671 23743276,23736016,23733217,23730986,23730564,23722753,23721984,23713208,23707944,23706739,23705858,23705594,23705080,23704844,23703982 Gene ID= ENSG00000123130.16 TPM= 13.13 Transcript Type= protein_coding chrX 23783173 23786226 23783173 23786226 + ENST00000379270.4@SAT1 ENST00000379270.4 protein_coding 23783173,23783658,23783800,23785328,23785520,23785686 23783417,23783709,23783883,23785429,23785560,23786226 Gene ID= ENSG00000130066.16 TPM= 343.65 Transcript Type= protein_coding chrX 23783197 23786210 23783197 23786210 + ENST00000489394.5@SAT1 ENST00000489394.5 protein_coding 23783197,23783658,23783800,23784294,23785328,23785520,23785686 23783417,23783709,23783883,23784403,23785429,23785560,23786210 Gene ID= ENSG00000130066.16 TPM= 6.79 Transcript Type= processed_transcript chrX 23833364 23907961 23833364 23907961 - transcript312.chrX.nic@APOO transcript312.chrX.nic protein_coding 23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833364 23907961,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833510 Gene ID= ENSG00000184831.13 TPM= 10.87 Transcript Type= NA chrX 23833353 23907934 23833353 23907934 - ENST00000379226.8@APOO ENST00000379226.8 protein_coding 23907694,23880845,23878915,23874403,23868593,23858642,23856302,23840313,23833353 23907934,23880952,23879034,23874457,23868688,23858733,23856382,23840377,23833612 Gene ID= ENSG00000184831.13 TPM= 17.21 Transcript Type= protein_coding chrX 23983724 24025287 23983724 24025287 - transcript315.chrX.nic@KLHL15 transcript315.chrX.nic protein_coding 24024857,24005989,23983724 24025287,24006700,23989030 Gene ID= ENSG00000174010.9 TPM= 3.62 Transcript Type= NA chrX 24073648 24074627 24073648 24074627 - transcript323.chrX.nnic@NA transcript323.chrX.nnic NA 24073648 24074627 Gene ID= novel_gene_chrX_324 TPM= 2.72 Transcript Type= NA chrX 24149446 24211610 24149446 24211610 + transcript325.chrX.nic@ZFX transcript325.chrX.nic protein_coding 24149446,24172715,24179183,24207326,24207712,24208218,24208900,24210193 24149794,24172800,24179770,24207475,24207855,24208370,24209040,24211610 Gene ID= ENSG00000005889.15 TPM= 1.81 Transcript Type= NA chrX 24465221 24534425 24465221 24534425 + ENST00000379162.8@PDK3 ENST00000379162.8 protein_coding 24465221,24494742,24498829,24503327,24505209,24518933,24526198,24527574,24528076,24531657,24533929 24465561,24494883,24498900,24503511,24505298,24519010,24526274,24527675,24528186,24531770,24534425 Gene ID= ENSG00000067992.12 TPM= 1.81 Transcript Type= protein_coding chrX 24693919 24996986 24693919 24996986 + ENST00000379068.7@POLA1 ENST00000379068.7 protein_coding 24693919,24699425,24703251,24704389,24714554,24715141,24716362,24716884,24717290,24717580,24723155,24724335,24725981,24726933,24727782,24732370,24733755,24735399,24737625,24739375,24741375,24742002,24743230,24745418,24748311,24748870,24809898,24810708,24812658,24814979,24821452,24826427,24841652,24843546,24888006,24930453,24995805 24694004,24699549,24703347,24704469,24714669,24715203,24716454,24716971,24717491,24717758,24723267,24724451,24726055,24727071,24727936,24732454,24733816,24735488,24737741,24739550,24741504,24742121,24743329,24745542,24748460,24748992,24809930,24810800,24812863,24815111,24821583,24826601,24841830,24843677,24888122,24930549,24996986 Gene ID= ENSG00000101868.10 TPM= 2.72 Transcript Type= protein_coding chrX 30653359 30731456 30653359 30731456 + ENST00000427190.5@GK ENST00000427190.5 protein_coding 30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30697732,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30727466,30728732 30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30697749,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30727552,30731456 Gene ID= ENSG00000198814.12 TPM= 1.2 Transcript Type= protein_coding chrX 30653359 30730608 30653359 30730608 + ENST00000378946.7@GK ENST00000378946.7 protein_coding 30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30697732,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30728732 30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30697749,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30730608 Gene ID= ENSG00000198814.12 TPM= 22.94 Transcript Type= protein_coding chrX 30653359 30730608 30653359 30730608 + ENST00000378943.7@GK ENST00000378943.7 protein_coding 30653359,30665511,30668012,30677375,30691123,30694400,30696042,30696617,30700414,30700838,30707556,30708054,30718538,30719419,30720011,30720621,30720852,30724101,30727466,30728732 30653615,30665584,30668118,30677452,30691199,30694537,30696151,30696683,30700449,30700905,30707598,30708134,30718616,30719515,30720095,30720741,30720995,30724181,30727552,30730608 Gene ID= ENSG00000198814.12 TPM= 1.2 Transcript Type= protein_coding chrX 31119228 31266962 31119228 31266962 - transcript347.chrX.nic@DMD transcript347.chrX.nic protein_coding 31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31173539,31172348,31169443,31147275,31146291,31134102,31126642,31119228 31266962,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31173604,31172413,31169601,31147518,31146414,31134194,31126673,31121930 Gene ID= ENSG00000198947.15 TPM= 3.32 Transcript Type= NA chrX 31119228 31266962 31119228 31266962 - transcript350.chrX.nnic@DMD transcript350.chrX.nnic protein_coding 31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31173539,31172348,31169443,31147275,31146291,31134102,31119228 31266962,31261016,31223121,31209699,31206656,31204118,31182904,31180481,31178805,31173604,31172413,31169601,31147518,31146414,31134194,31121930 Gene ID= ENSG00000198947.15 TPM= 2.42 Transcript Type= NA chrX 31119219 31266952 31119219 31266952 - ENST00000378723.7@DMD ENST00000378723.7 protein_coding 31266810,31260955,31223047,31209498,31206582,31203961,31182738,31180370,31178669,31177932,31173539,31172348,31169443,31147275,31146291,31134102,31119219 31266952,31261016,31223121,31209699,31206667,31204118,31182904,31180481,31178805,31177970,31173604,31172413,31169601,31147518,31146414,31134194,31121930 Gene ID= ENSG00000198947.15 TPM= 6.95 Transcript Type= protein_coding chrX 34627064 34657288 34627064 34657288 - ENST00000275954.3@TMEM47 ENST00000275954.3 protein_coding 34656804,34639247,34627064 34657288,34639387,34630491 Gene ID= ENSG00000147027.3 TPM= 69.73 Transcript Type= protein_coding chrX 37349275 37457295 37349275 37457295 + ENST00000378628.8@PRRG1 ENST00000378628.8 protein_coding 37349275,37406209,37425840,37453136 37349395,37406259,37426000,37457295 Gene ID= ENSG00000130962.17 TPM= 9.06 Transcript Type= protein_coding chrX 37780011 37813461 37780011 37813461 + ENST00000378588.4@CYBB ENST00000378588.4 protein_coding 37780011,37782088,37783490,37791975,37793665,37795951,37798955,37801256,37803877,37805006,37806387,37809567,37810791 37780122,37782183,37783600,37792059,37793810,37796141,37799084,37801348,37804130,37805168,37806533,37809691,37813461 Gene ID= ENSG00000165168.7 TPM= 18.11 Transcript Type= protein_coding chrX 37838836 37847637 37838836 37847637 - ENST00000378578.8@DYNLT3 ENST00000378578.8 protein_coding 37847481,37846317,37841782,37841028,37838836 37847637,37846358,37841905,37841105,37840651 Gene ID= ENSG00000165169.10 TPM= 153.94 Transcript Type= protein_coding chrX 37905937 38128964 37905937 38128964 + transcript370.chrX.nnic@SYTL5 transcript370.chrX.nnic protein_coding 37905937,37939582,37949267,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37906140,37939689,37949405,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38128964 Gene ID= ENSG00000147041.11 TPM= 2.72 Transcript Type= NA chrX 37906055 38128964 37906055 38128964 + transcript371.chrX.nnic@SYTL5 transcript371.chrX.nnic protein_coding 37906055,37939582,38031000,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37906140,37939689,38031090,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38128964 Gene ID= ENSG00000147041.11 TPM= 2.72 Transcript Type= NA chrX 37906479 38128964 37906479 38128964 + transcript372.chrX.nnic@SYTL5 transcript372.chrX.nnic protein_coding 37906479,37939582,37949267,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37906609,37939689,37949405,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38128964 Gene ID= ENSG00000147041.11 TPM= 2.72 Transcript Type= NA chrX 37905884 38128964 37905884 38128964 + transcript373.chrX.nnic@SYTL5 transcript373.chrX.nnic protein_coding 37905884,37939582,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37906151,37939689,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38128964 Gene ID= ENSG00000147041.11 TPM= 5.43 Transcript Type= NA chrX 37905932 38128964 37905932 38128964 + transcript375.chrX.nnic@SYTL5 transcript375.chrX.nnic protein_coding 37905932,38031000,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37906140,38031090,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38128964 Gene ID= ENSG00000147041.11 TPM= 3.62 Transcript Type= NA chrX 37905611 38128964 37905611 38128964 + transcript380.chrX.nnic@SYTL5 transcript380.chrX.nnic protein_coding 37905611,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37905715,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38128964 Gene ID= ENSG00000147041.11 TPM= 2.72 Transcript Type= NA chrX 37905860 38129592 37905860 38129592 + transcript381.chrX.nnic@SYTL5 transcript381.chrX.nnic protein_coding 37905860,38033534,38054213,38072047,38073590,38076567,38089446,38094295,38096134,38102342,38106593,38108600,38110321,38120358,38122080,38125298,38126588 37906140,38034008,38054422,38072162,38073698,38076701,38089587,38094424,38096234,38102434,38106771,38108699,38110482,38120466,38122215,38125506,38129592 Gene ID= ENSG00000147041.11 TPM= 14.49 Transcript Type= NA chrX 38149342 38165219 38149342 38165219 - transcript392.chrX.nnic@SRPX transcript392.chrX.nnic protein_coding 38165096,38164769,38160933,38160017,38156896,38154462,38149342 38165219,38164895,38161054,38160196,38157029,38154583,38149894 Gene ID= ENSG00000101955.14 TPM= 8.38 Transcript Type= NA chrX 38147620 38165085 38147620 38165085 - transcript394.chrX.nic@SRPX transcript394.chrX.nic protein_coding 38164769,38160933,38160017,38156896,38154462,38147620 38165085,38161054,38160196,38157029,38154583,38149894 Gene ID= ENSG00000101955.14 TPM= 6.57 Transcript Type= NA chrX 38149339 38220899 38149339 38220899 - ENST00000378533.3@SRPX ENST00000378533.3 protein_coding 38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149339 38220899,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894 Gene ID= ENSG00000101955.14 TPM= 82.63 Transcript Type= protein_coding chrX 38149336 38220924 38149336 38220924 - ENST00000544439.5@SRPX ENST00000544439.5 protein_coding 38220696,38174160,38171881,38164769,38160933,38160017,38156896,38154462,38149336 38220924,38174351,38172057,38164895,38161054,38160196,38157029,38154583,38149894 Gene ID= ENSG00000101955.14 TPM= 8.38 Transcript Type= protein_coding chrX 38149336 38220924 38149336 38220924 - ENST00000538295.5@SRPX ENST00000538295.5 protein_coding 38220696,38178285,38174160,38171881,38164769,38160933,38160017,38156896,38149336 38220924,38178344,38174351,38172057,38164895,38161054,38160196,38157029,38149894 Gene ID= ENSG00000101955.14 TPM= 2.72 Transcript Type= protein_coding chrX 38269163 38327564 38269163 38327564 - ENST00000318842.11@RPGR ENST00000318842.11 protein_coding 38327340,38323399,38322853,38321027,38318829,38317316,38310615,38304635,38301247,38298956,38297284,38291393,38290959,38287861,38287094,38276587,38275089,38273386,38269163 38327564,38323524,38322945,38321089,38318987,38317465,38310773,38304790,38301371,38299141,38297452,38291484,38291024,38288041,38287245,38276772,38275146,38273477,38269832 Gene ID= ENSG00000156313.12 TPM= 8.15 Transcript Type= protein_coding chrX 38612605 38688919 38612605 38688919 + transcript398.chrX.nic@TSPAN7 transcript398.chrX.nic protein_coding 38612605,38666121,38671376,38674221,38675705,38681204,38687599,38687939 38612666,38666309,38671450,38674316,38675860,38681287,38687674,38688919 Gene ID= ENSG00000156298.12 TPM= 23.54 Transcript Type= NA chrX 38801432 38806528 38801432 38806528 + ENST00000614558.2@MID1IP1 ENST00000614558.2 protein_coding 38801432,38802535,38804683 38801487,38804413,38806528 Gene ID= ENSG00000165175.15 TPM= 45.28 Transcript Type= protein_coding chrX 38801432 38806528 38801432 38806528 + ENST00000457894.4@MID1IP1 ENST00000457894.4 protein_coding 38801432,38804683 38801487,38806528 Gene ID= ENSG00000165175.15 TPM= 8.15 Transcript Type= protein_coding chrX 40051246 40097403 40051246 40097403 - ENST00000397354.7@BCOR ENST00000397354.7 protein_coding 40097215,40077844,40076454,40072349,40071637,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051246 40097403,40077969,40076532,40075180,40071690,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400 Gene ID= ENSG00000183337.16 TPM= 4.07 Transcript Type= protein_coding chrX 40051246 40177329 40051246 40177329 - ENST00000378455.8@BCOR ENST00000378455.8 protein_coding 40177007,40077844,40076454,40072349,40070973,40064336,40063608,40062746,40062139,40057155,40055368,40054256,40053886,40051246 40177329,40077969,40076532,40075180,40071159,40064599,40063850,40063071,40062393,40057321,40055513,40054333,40054042,40052400 Gene ID= ENSG00000183337.16 TPM= 1.36 Transcript Type= protein_coding chrX 40262951 40287721 40262951 40287721 + transcript408.chrX.nnic@AC091806.1 transcript408.chrX.nnic lincRNA 40262951,40283297,40285529 40263552,40283384,40287721 Gene ID= ENSG00000236393.1 TPM= 3.62 Transcript Type= NA chrX 40262917 40287720 40262917 40287720 + ENST00000452690.1@AC091806.1 ENST00000452690.1 lincRNA 40262917,40283441,40285529 40263552,40283612,40287720 Gene ID= ENSG00000236393.1 TPM= 5.43 Transcript Type= lincRNA chrX 40580875 40606848 40580875 40606848 + ENST00000636580.1@ATP6AP2 ENST00000636580.1 protein_coding 40580875,40588986,40591234,40597249,40597527,40598681,40599592,40600762,40605561 40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606848 Gene ID= ENSG00000182220.14 TPM= 260.64 Transcript Type= protein_coding chrX 40580970 40606635 40580970 40606635 + ENST00000636574.1@ATP6AP2 ENST00000636574.1 protein_coding 40580970,40588986,40591234,40597249,40597529,40598681,40599592,40600762,40605561 40581102,40589116,40591365,40597344,40597664,40598734,40599741,40600881,40606635 Gene ID= ENSG00000182220.14 TPM= 3.47 Transcript Type= nonsense_mediated_decay chrX 40580998 40606637 40580998 40606637 + ENST00000636287.1@ATP6AP2 ENST00000636287.1 protein_coding 40580998,40588986,40591234,40597527,40598681,40599592,40600762,40605564 40581102,40589116,40591365,40597664,40598734,40599741,40600881,40606637 Gene ID= ENSG00000182220.14 TPM= 2.11 Transcript Type= protein_coding chrX 40649705 40736161 40649705 40736161 - transcript425.chrX.nnic@MED14 transcript425.chrX.nnic protein_coding 40735858,40729319,40726746,40714537,40713778,40712914,40712186,40711169,40709979,40709348,40703444,40701165,40697024,40692708,40692183,40688454,40682836,40682603,40681852,40680758,40679864,40675221,40671861,40664307,40662925,40659428,40659227,40654935,40654364,40649705 40736161,40729345,40726851,40714710,40713907,40713042,40712293,40711301,40710129,40709459,40703569,40701243,40697183,40692902,40692317,40688530,40682996,40682749,40681943,40680910,40680133,40675361,40671972,40664489,40663160,40659607,40659334,40655060,40654556,40651879 Gene ID= ENSG00000180182.10 TPM= 1.81 Transcript Type= NA chrX 40735400 40738701 40735400 40738701 + ENST00000456333.2@MED14OS ENST00000456333.2 protein_coding 40735400,40738193 40735790,40738701 Gene ID= ENSG00000234636.2 TPM= 2.72 Transcript Type= protein_coding chrX 41085443 41186531 41085443 41186531 + transcript427.chrX.nnic@USP9X transcript427.chrX.nnic protein_coding 41085443,41123471,41129000,41131457,41134725,41136804,41140654,41140966,41141291,41143291,41144520,41148369,41150921,41152933,41162788,41165872,41167482,41168007,41169995,41170470,41171838,41183998,41184397,41186517 41086109,41123724,41129145,41131536,41134837,41137022,41140771,41141217,41141431,41143443,41144626,41148575,41151057,41153081,41162877,41166214,41167577,41168218,41170235,41170619,41171958,41184128,41184675,41186531 Gene ID= ENSG00000124486.12 TPM= 279.81 Transcript Type= NA chrX 41334161 41350203 41334161 41350203 + transcript436.chrX.nnic@DDX3X transcript436.chrX.nnic protein_coding 41334161,41337408,41339036,41341484,41342495,41342737,41343216,41343737,41344030,41344239,41345180,41345404,41346229,41346505,41346859,41347312,41347640,41348465 41334297,41337465,41339083,41341616,41342653,41342836,41343351,41343822,41344128,41344399,41345324,41345548,41346410,41346622,41347012,41347451,41348382,41350203 Gene ID= ENSG00000215301.9 TPM= 16.75 Transcript Type= NA chrX 41334161 41350285 41334161 41350285 + transcript441.chrX.nic@DDX3X transcript441.chrX.nic protein_coding 41334161,41337408,41339036,41341484,41342737,41343216,41343737,41344030,41344239,41345180,41345404,41346229,41346505,41346859,41347312,41347640 41334297,41337465,41339083,41342653,41342836,41343351,41343822,41344128,41344399,41345324,41345548,41346410,41346622,41347012,41347451,41350285 Gene ID= ENSG00000215301.9 TPM= 20.37 Transcript Type= NA chrX 41519208 41923554 41519208 41923554 - transcript452.chrX.nnic@CASK transcript452.chrX.nnic protein_coding 41922930,41853097,41787178,41745524,41739384,41671428,41665277,41660439,41636578,41626604,41622617,41609904,41589515,41586907,41578340,41569668,41561559,41559779,41557032,41553719,41542691,41534893,41534706,41531007,41523951,41519208 41923554,41853227,41787283,41745601,41739456,41671530,41665452,41660561,41636661,41626703,41622634,41610025,41589592,41586987,41578528,41569746,41561644,41559847,41557100,41553915,41542806,41534973,41534786,41531209,41524034,41520596 Gene ID= ENSG00000147044.20 TPM= 4.07 Transcript Type= NA chrX 41519208 41923616 41519208 41923616 - transcript456.chrX.nnic@CASK transcript456.chrX.nnic protein_coding 41922930,41853115,41787178,41745524,41739384,41671428,41665277,41660439,41636578,41626604,41609904,41589515,41586907,41578340,41569668,41561559,41559779,41553719,41542691,41534893,41534706,41531007,41523951,41519208 41923616,41853227,41787283,41745601,41739456,41671530,41665452,41660561,41636661,41626703,41610025,41589592,41586987,41578528,41569746,41561644,41559847,41553915,41542806,41534973,41534786,41531209,41524034,41520596 Gene ID= ENSG00000147044.20 TPM= 4.83 Transcript Type= NA chrX 41660102 41923547 41660102 41923547 - transcript461.chrX.nic@CASK transcript461.chrX.nic protein_coding 41922930,41853115,41787178,41745524,41739384,41671428,41665277,41660102 41923547,41853227,41787283,41745601,41739456,41671530,41665452,41660561 Gene ID= ENSG00000147044.20 TPM= 2.11 Transcript Type= NA chrX 41688973 41697277 41688973 41697277 + ENST00000378142.8@GPR34 ENST00000378142.8 protein_coding 41688973,41689743,41695555 41689084,41689835,41697277 Gene ID= ENSG00000171659.13 TPM= 15.39 Transcript Type= protein_coding chrX 41689006 41697273 41689006 41697273 + ENST00000378138.5@GPR34 ENST00000378138.5 protein_coding 41689006,41689746,41695628 41689084,41689835,41697273 Gene ID= ENSG00000171659.13 TPM= 1.81 Transcript Type= protein_coding chrX 43654907 43746824 43654907 43746824 + ENST00000542639.5@MAOA ENST00000542639.5 protein_coding 43654907,43657862,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367 43656414,43657969,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746824 Gene ID= ENSG00000189221.9 TPM= 9.51 Transcript Type= protein_coding chrX 43656219 43746821 43656219 43746821 + ENST00000338702.3@MAOA ENST00000338702.3 protein_coding 43656219,43683513,43693291,43711872,43712705,43728173,43731241,43731694,43732699,43736227,43740681,43741950,43743794,43744109,43744367 43656414,43683607,43693428,43711976,43712796,43728314,43731390,43731853,43732795,43736280,43740738,43742047,43743905,43744171,43746821 Gene ID= ENSG00000189221.9 TPM= 95.54 Transcript Type= protein_coding chrX 43766611 43882447 43766611 43882447 - ENST00000378069.4@MAOB ENST00000378069.4 protein_coding 43882254,43843670,43838868,43803300,43802172,43797125,43795739,43793419,43781448,43780342,43778682,43775175,43769307,43768654,43766611 43882447,43843764,43839005,43803404,43802263,43797266,43795888,43793578,43781544,43780395,43778739,43775272,43769418,43768716,43767618 Gene ID= ENSG00000069535.13 TPM= 180.2 Transcript Type= protein_coding chrX 44523639 44543001 44523639 44543001 - ENST00000378045.4@FUNDC1 ENST00000378045.4 protein_coding 44542805,44541945,44538467,44527237,44523639 44543001,44542101,44538542,44527365,44524275 Gene ID= ENSG00000069509.5 TPM= 11.77 Transcript Type= protein_coding chrX 44873152 45112598 44873152 45112598 + transcript479.chrX.nic@KDM6A transcript479.chrX.nic protein_coding 44873152,44873924,44961284,44974666,45010961,45020610,45034931,45037655,45051709,45053829,45059006,45059247,45060022,45061324,45063422,45069579,45076697,45078400,45079146,45082576,45082715,45083460,45085865,45089743,45090723,45107410,45110079,45111382 44873712,44873987,44961392,44974715,45011019,45020730,45034985,45037689,45051802,45053955,45059104,45059466,45060156,45061419,45063817,45070357,45076826,45078505,45079351,45082640,45082789,45083608,45085979,45089930,45090864,45107536,45110249,45112598 Gene ID= ENSG00000147050.14 TPM= 9.06 Transcript Type= NA chrX 45148374 45200901 45148374 45200901 - ENST00000398000.6@CXorf36 ENST00000398000.6 protein_coding 45200594,45191751,45157715,45153910,45148374 45200901,45192015,45157888,45154198,45151992 Gene ID= ENSG00000147113.16 TPM= 7.24 Transcript Type= protein_coding chrX 46446857 46474639 46446857 46474639 + ENST00000344302.8@KRBOX4 ENST00000344302.8 protein_coding 46446857,46448200,46450431,46462748,46463198,46472750 46447346,46448310,46450475,46462874,46463308,46474639 Gene ID= ENSG00000147121.15 TPM= 16.3 Transcript Type= protein_coding chrX 46545493 46548408 46545493 46548408 + ENST00000421685.2@ZNF674-AS1 ENST00000421685.2 lincRNA 46545493,46546466 46545627,46548408 Gene ID= ENSG00000230844.2 TPM= 2.72 Transcript Type= lincRNA chrX 46545511 46598406 46545511 46598406 + transcript498.chrX.nnic@CHST7 transcript498.chrX.nnic protein_coding 46545511,46563259,46597760 46545627,46563351,46598406 Gene ID= ENSG00000147119.3 TPM= 1.81 Transcript Type= NA chrX 46573784 46598408 46573784 46598408 + ENST00000276055.3@CHST7 ENST00000276055.3 protein_coding 46573784,46597760 46575423,46598408 Gene ID= ENSG00000147119.3 TPM= 13.58 Transcript Type= protein_coding chrX 46602016 46759192 46602016 46759192 - transcript501.chrX.nic@SLC9A7 transcript501.chrX.nic protein_coding 46758705,46682336,46679678,46672551,46669607,46662538,46662016,46653609,46651316,46651110,46648686,46643236,46635589,46631586,46620977,46613289,46606908,46602016 46759192,46682535,46679755,46672627,46669719,46662643,46662157,46653714,46651404,46651223,46648797,46643389,46635648,46631649,46621059,46613394,46607203,46606370 Gene ID= ENSG00000065923.9 TPM= 1.81 Transcript Type= NA chrX 46836940 46882358 46836940 46882358 + ENST00000218340.3@RP2 ENST00000218340.3 protein_coding 46836940,46853476,46859988,46877505,46879686 46837202,46854141,46860102,46877590,46882358 Gene ID= ENSG00000102218.5 TPM= 33.51 Transcript Type= protein_coding chrX 46912433 47061241 46912433 47061241 + ENST00000614628.4@JADE3 ENST00000614628.4 protein_coding 46912433,46984884,46985713,46998120,47024724,47027892,47033621,47038949,47054158,47056082,47058167 46912719,46984940,46985792,46998277,47024914,47028103,47033788,47039065,47054628,47056199,47061241 Gene ID= ENSG00000102221.13 TPM= 7.24 Transcript Type= protein_coding chrX 47078092 47095896 47078092 47095896 + transcript516.chrX.nic@RGN transcript516.chrX.nic protein_coding 47078092,47081130,47084418,47091678,47092061,47092897 47078709,47081307,47084600,47091809,47092215,47095896 Gene ID= ENSG00000130988.12 TPM= 42.56 Transcript Type= NA chrX 47078393 47093312 47078393 47093312 + transcript517.chrX.nic@RGN transcript517.chrX.nic protein_coding 47078393,47081130,47084418,47092061,47092897 47078709,47081307,47084600,47092215,47093312 Gene ID= ENSG00000130988.12 TPM= 12.68 Transcript Type= NA chrX 47078355 47093314 47078355 47093314 + ENST00000397180.5@RGN ENST00000397180.5 protein_coding 47078355,47080317,47081130,47084418,47089776,47091678,47092061,47092897 47078709,47080936,47081307,47084600,47089991,47091809,47092215,47093314 Gene ID= ENSG00000130988.12 TPM= 40.07 Transcript Type= protein_coding chrX 47078380 47093313 47078380 47093313 + ENST00000352078.8@RGN ENST00000352078.8 protein_coding 47078380,47081130,47084418,47089776,47091678,47092061,47092897 47078709,47081307,47084600,47089991,47091809,47092215,47093313 Gene ID= ENSG00000130988.12 TPM= 136.06 Transcript Type= protein_coding chrX 47080859 47093310 47080859 47093310 + ENST00000336169.3@RGN ENST00000336169.3 protein_coding 47080859,47081130,47084418,47089776,47091678,47092061,47092897 47080936,47081307,47084600,47089991,47091809,47092215,47093310 Gene ID= ENSG00000130988.12 TPM= 8.38 Transcript Type= protein_coding chrX 47142216 47145504 47142216 47145504 - ENST00000377811.3@NDUFB11 ENST00000377811.3 protein_coding 47144473,47142614,47142216 47145504,47142744,47142440 Gene ID= ENSG00000147123.10 TPM= 122.25 Transcript Type= protein_coding chrX 47145202 47186813 47145202 47186813 + transcript524.chrX.nic@RBM10 transcript524.chrX.nic protein_coding 47145202,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474 47145485,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813 Gene ID= ENSG00000182872.15 TPM= 26.64 Transcript Type= NA chrX 47145221 47186813 47145221 47186813 + transcript526.chrX.nic@RBM10 transcript526.chrX.nic protein_coding 47145221,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474 47145516,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813 Gene ID= ENSG00000182872.15 TPM= 10.34 Transcript Type= NA chrX 47145220 47186813 47145220 47186813 + transcript530.chrX.nnic@RBM10 transcript530.chrX.nnic protein_coding 47145220,47147357,47169315,47171028,47173128,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474 47145485,47147498,47169498,47171258,47173197,47176586,47179163,47179495,47180037,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813 Gene ID= ENSG00000182872.15 TPM= 5.96 Transcript Type= NA chrX 47144869 47186811 47144869 47186811 + ENST00000377604.7@RBM10 ENST00000377604.7 protein_coding 47144869,47147357,47169315,47171028,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474 47145485,47147498,47169498,47171258,47173197,47175092,47176586,47179163,47179495,47180040,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186811 Gene ID= ENSG00000182872.15 TPM= 48.15 Transcript Type= protein_coding chrX 47145279 47186813 47145279 47186813 + ENST00000345781.10@RBM10 ENST00000345781.10 protein_coding 47145279,47147357,47169315,47173128,47175019,47176500,47179103,47179319,47179880,47180212,47180419,47181215,47181507,47181749,47181951,47182162,47185055,47185302,47185442,47185716,47186065,47186258,47186474 47145485,47147498,47169498,47173197,47175092,47176586,47179163,47179495,47180040,47180309,47180506,47181401,47181646,47181866,47182042,47182326,47185204,47185367,47185630,47185790,47186171,47186387,47186813 Gene ID= ENSG00000182872.15 TPM= 3.92 Transcript Type= protein_coding chrX 47190861 47215128 47190861 47215128 + ENST00000377351.8@UBA1 ENST00000377351.8 protein_coding 47190861,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794 47190950,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128 Gene ID= ENSG00000130985.16 TPM= 43.8 Transcript Type= protein_coding chrX 47193842 47215128 47193842 47215128 + ENST00000335972.10@UBA1 ENST00000335972.10 protein_coding 47193842,47198803,47199048,47199209,47199480,47200894,47201276,47201478,47202156,47202358,47202638,47202943,47203134,47203541,47205948,47206248,47209623,47209928,47210842,47211036,47212424,47212771,47212990,47214327,47214537,47214794 47194024,47198919,47199106,47199377,47199614,47201000,47201366,47201610,47202253,47202504,47202814,47203047,47203214,47203696,47206113,47206444,47209687,47210123,47210916,47211225,47212512,47212863,47213181,47214428,47214637,47215128 Gene ID= ENSG00000130985.16 TPM= 314.56 Transcript Type= protein_coding chrX 47218705 47229993 47218705 47229993 + transcript564.chrX.nic@CDK16 transcript564.chrX.nic protein_coding 47218705,47222261,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731 47219105,47222342,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229993 Gene ID= ENSG00000102225.15 TPM= 10.48 Transcript Type= NA chrX 47218680 47229993 47218680 47229993 + transcript569.chrX.nic@CDK16 transcript569.chrX.nic protein_coding 47218680,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731 47219105,47223759,47224476,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229993 Gene ID= ENSG00000102225.15 TPM= 10.02 Transcript Type= NA chrX 47218233 47229997 47218233 47229997 + ENST00000457458.6@CDK16 ENST00000457458.6 protein_coding 47218233,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731 47218664,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997 Gene ID= ENSG00000102225.15 TPM= 15 Transcript Type= protein_coding chrX 47218688 47229997 47218688 47229997 + ENST00000357227.8@CDK16 ENST00000357227.8 protein_coding 47218688,47223552,47224385,47224618,47224834,47224988,47225772,47225965,47226279,47226583,47226812,47226994,47227181,47227379,47228567,47228731 47219105,47223759,47224518,47224743,47224890,47225102,47225866,47226027,47226402,47226703,47226909,47227099,47227223,47227469,47228644,47229997 Gene ID= ENSG00000102225.15 TPM= 105.56 Transcript Type= protein_coding chrX 47232690 47248328 47232690 47248328 + ENST00000377107.6@USP11 ENST00000377107.6 protein_coding 47232690,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793 47233219,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248328 Gene ID= ENSG00000102226.9 TPM= 108.37 Transcript Type= protein_coding chrX 47233400 47248329 47233400 47248329 + transcript583.chrX.nic@USP11 transcript583.chrX.nic protein_coding 47233400,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793 47233533,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248329 Gene ID= ENSG00000102226.9 TPM= 30.49 Transcript Type= NA chrX 47233807 47248329 47233807 47248329 + transcript586.chrX.nic@USP11 transcript586.chrX.nic protein_coding 47233807,47239070,47239351,47239790,47240305,47240587,47240774,47241277,47241541,47242082,47242439,47242626,47243396,47244498,47244682,47245016,47245370,47247072,47247304,47247611,47247793 47233912,47239179,47239481,47239907,47240450,47240648,47240876,47241450,47241699,47242306,47242522,47242720,47243602,47244550,47244924,47245086,47245482,47247221,47247419,47247699,47248329 Gene ID= ENSG00000102226.9 TPM= 8.76 Transcript Type= NA chrX 47561100 47571920 47561100 47571920 + ENST00000290277.10@ARAF ENST00000290277.10 protein_coding 47561100,47562909,47563226,47564797,47564985,47565243,47566639,47566884,47566986,47567230,47568718,47568987,47569539,47569893,47570878,47571323 47561251,47563063,47563329,47564899,47565139,47565350,47566780,47566911,47567131,47567432,47568894,47569033,47569657,47570024,47571012,47571920 Gene ID= ENSG00000078061.12 TPM= 15.39 Transcript Type= protein_coding chrX 47561222 47565975 47561222 47565975 + ENST00000377039.2@ARAF ENST00000377039.2 protein_coding 47561222,47562909,47563226,47564797,47564985,47565252 47561251,47563063,47563329,47564899,47565139,47565975 Gene ID= ENSG00000078061.12 TPM= 5.43 Transcript Type= protein_coding chrX 47582313 47586789 47582313 47586789 + ENST00000218388.8@TIMP1 ENST00000218388.8 protein_coding 47582313,47583408,47584936,47585205,47585543,47586521 47582474,47583536,47585015,47585331,47585667,47586789 Gene ID= ENSG00000102265.11 TPM= 698.33 Transcript Type= protein_coding chrX 47582450 47586789 47582450 47586789 + ENST00000377017.5@TIMP1 ENST00000377017.5 protein_coding 47582450,47584936,47585205,47585543,47586521 47582474,47585015,47585331,47585667,47586789 Gene ID= ENSG00000102265.11 TPM= 8.3 Transcript Type= protein_coding chrX 47624214 47629965 47624214 47629965 - ENST00000396992.7@CFP ENST00000396992.7 protein_coding 47629769,47629524,47628102,47627471,47627141,47626773,47626328,47626058,47624214 47629965,47629674,47628277,47627641,47627332,47626946,47626519,47626169,47624440 Gene ID= ENSG00000126759.13 TPM= 19.02 Transcript Type= protein_coding chrX 47651805 47659117 47651805 47659117 - ENST00000335890.2@UXT ENST00000335890.2 protein_coding 47658830,47657782,47657572,47657183,47652081,47651805 47659117,47657863,47657639,47657290,47652144,47651895 Gene ID= ENSG00000126756.11 TPM= 8.6 Transcript Type= protein_coding chrX 47651798 47659161 47651798 47659161 - ENST00000333119.7@UXT ENST00000333119.7 protein_coding 47659115,47658830,47657782,47657572,47657183,47652081,47651798 47659161,47658936,47657863,47657639,47657290,47652144,47651895 Gene ID= ENSG00000126756.11 TPM= 49.35 Transcript Type= protein_coding chrX 47974851 48003955 47974851 48003955 - ENST00000376943.7@ZNF182 ENST00000376943.7 protein_coding 48003909,48003508,48002595,47983285,47982949,47974851 48003955,48003702,48002653,47983411,47983038,47977797 Gene ID= ENSG00000147118.11 TPM= 2.72 Transcript Type= protein_coding chrX 48476199 48486348 48476199 48486348 + transcript640.chrX.nic@FTSJ1 transcript640.chrX.nic protein_coding 48476199,48476563,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48482986,48485736 48476396,48476668,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486348 Gene ID= ENSG00000068438.14 TPM= 1.81 Transcript Type= NA chrX 48476152 48486348 48476152 48486348 + transcript644.chrX.nic@FTSJ1 transcript644.chrX.nic protein_coding 48476152,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482409,48482597,48482986,48485736 48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486348 Gene ID= ENSG00000068438.14 TPM= 9.96 Transcript Type= NA chrX 48476152 48486348 48476152 48486348 + transcript645.chrX.nic@FTSJ1 transcript645.chrX.nic protein_coding 48476152,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48485736 48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48483027,48486348 Gene ID= ENSG00000068438.14 TPM= 4.53 Transcript Type= NA chrX 48476152 48486293 48476152 48486293 + transcript648.chrX.nic@FTSJ1 transcript648.chrX.nic protein_coding 48476152,48477961,48478449,48478617,48479038,48481151,48481426,48481632,48482403,48482597,48485736 48476396,48478168,48478518,48478707,48479116,48481342,48481528,48481715,48482506,48483027,48486293 Gene ID= ENSG00000068438.14 TPM= 1.81 Transcript Type= NA chrX 48476161 48486305 48476161 48486305 + ENST00000348411.2@FTSJ1 ENST00000348411.2 protein_coding 48476161,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482403,48482597,48482986,48485736 48476396,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486305 Gene ID= ENSG00000068438.14 TPM= 25.36 Transcript Type= protein_coding chrX 48476161 48486299 48476161 48486299 + ENST00000019019.6@FTSJ1 ENST00000019019.6 protein_coding 48476161,48476563,48477961,48478449,48478617,48479038,48481151,48481289,48481426,48481632,48482409,48482597,48482986,48485736 48476396,48476668,48478168,48478518,48478707,48479116,48481203,48481342,48481528,48481715,48482506,48482794,48483027,48486299 Gene ID= ENSG00000068438.14 TPM= 2.72 Transcript Type= protein_coding chrX 48508962 48520806 48508962 48520806 + ENST00000359882.8@PORCN ENST00000359882.8 protein_coding 48508962,48509784,48511295,48511892,48512326,48512589,48514127,48514240,48514525,48515717,48515890,48516061,48517183,48520375 48509103,48509956,48511487,48511935,48512507,48512719,48514141,48514365,48514625,48515793,48515953,48516146,48517293,48520806 Gene ID= ENSG00000102312.21 TPM= 43.81 Transcript Type= protein_coding chrX 48509002 48520814 48509002 48520814 + ENST00000355961.8@PORCN ENST00000355961.8 protein_coding 48509002,48509784,48511295,48511892,48512326,48512589,48512835,48514240,48514525,48515717,48515890,48516061,48517183,48520375 48509103,48509956,48511487,48511935,48512507,48512719,48512852,48514365,48514625,48515793,48515953,48516146,48517293,48520814 Gene ID= ENSG00000102312.21 TPM= 17.1 Transcript Type= protein_coding chrX 48521158 48528716 48521158 48528716 + ENST00000495186.5@EBP ENST00000495186.5 protein_coding 48521158,48523699,48526989,48527155,48528234 48521907,48524072,48527025,48527285,48528716 Gene ID= ENSG00000147155.10 TPM= 99.61 Transcript Type= protein_coding chrX 48521799 48528710 48521799 48528710 + ENST00000276096.10@EBP ENST00000276096.10 protein_coding 48521799,48523923,48526989,48527155,48528234 48521907,48524072,48527025,48527285,48528710 Gene ID= ENSG00000147155.10 TPM= 22.64 Transcript Type= processed_transcript chrX 48539457 48562609 48539457 48562609 + ENST00000376771.8@TBC1D25 ENST00000376771.8 protein_coding 48539457,48541333,48544869,48558897,48559158,48559614 48539920,48541442,48545023,48559024,48559346,48562609 Gene ID= ENSG00000068354.15 TPM= 24.45 Transcript Type= protein_coding chrX 48539684 48562612 48539684 48562612 + transcript678.chrX.nnic@TBC1D25 transcript678.chrX.nnic protein_coding 48539684,48541333,48544869,48558897,48559158,48559614 48539920,48541513,48545023,48559024,48559346,48562612 Gene ID= ENSG00000068354.15 TPM= 5.43 Transcript Type= NA chrX 48574446 48578288 48574446 48578288 + transcript696.chrX.nic@RBM3 transcript696.chrX.nic protein_coding 48574446,48575168,48575561,48576314,48576508,48577026,48577465 48574573,48575283,48576083,48576419,48576604,48577109,48578288 Gene ID= ENSG00000102317.17 TPM= 4.53 Transcript Type= NA chrX 48574945 48578288 48574945 48578288 + transcript697.chrX.nic@RBM3 transcript697.chrX.nic protein_coding 48574945,48575561,48575815,48576314,48576508,48577026,48577465 48575283,48575667,48576083,48576419,48576604,48577109,48578288 Gene ID= ENSG00000102317.17 TPM= 3.62 Transcript Type= NA chrX 48574458 48578288 48574458 48578288 + transcript699.chrX.nic@RBM3 transcript699.chrX.nic protein_coding 48574458,48575168,48575561,48576508,48577026,48577465 48574573,48575283,48576419,48576604,48577109,48578288 Gene ID= ENSG00000102317.17 TPM= 7.24 Transcript Type= NA chrX 48574945 48578288 48574945 48578288 + transcript700.chrX.nic@RBM3 transcript700.chrX.nic protein_coding 48574945,48575561,48576314,48576508,48577026,48577465 48575283,48576083,48576419,48576604,48577109,48578288 Gene ID= ENSG00000102317.17 TPM= 4.53 Transcript Type= NA chrX 48597478 48608867 48597478 48608867 + ENST00000376729.9@WDR13 ENST00000376729.9 protein_coding 48597478,48597958,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848 48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48608867 Gene ID= ENSG00000101940.17 TPM= 87.56 Transcript Type= protein_coding chrX 48597474 48605201 48597474 48605201 + transcript707.chrX.nic@WDR13 transcript707.chrX.nic protein_coding 48597474,48597958,48598751,48599353,48599587,48600319,48601784,48602065,48604272,48604848 48597614,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605201 Gene ID= ENSG00000101940.17 TPM= 26.18 Transcript Type= NA chrX 48597475 48605201 48597475 48605201 + transcript710.chrX.nnic@WDR13 transcript710.chrX.nnic protein_coding 48597475,48597958,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848 48597654,48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605201 Gene ID= ENSG00000101940.17 TPM= 15.49 Transcript Type= NA chrX 48597528 48605201 48597528 48605201 + transcript719.chrX.nic@WDR13 transcript719.chrX.nic protein_coding 48597528,48598751,48599353,48599587,48600319,48601784,48602065,48604272,48604848 48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605201 Gene ID= ENSG00000101940.17 TPM= 16.22 Transcript Type= NA chrX 48597492 48605193 48597492 48605193 + ENST00000218056.9@WDR13 ENST00000218056.9 protein_coding 48597492,48598717,48599353,48599587,48600319,48601784,48602065,48604272,48604848 48598037,48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193 Gene ID= ENSG00000101940.17 TPM= 96.99 Transcript Type= protein_coding chrX 48597809 48605193 48597809 48605193 + ENST00000479279.5@WDR13 ENST00000479279.5 protein_coding 48597809,48599353,48599587,48600319,48601784,48602065,48604272,48604848 48598957,48599462,48599717,48600626,48601964,48602206,48604390,48605193 Gene ID= ENSG00000101940.17 TPM= 6.89 Transcript Type= retained_intron chrX 48683779 48691427 48683779 48691427 + ENST00000376701.4@WAS ENST00000376701.4 protein_coding 48683779,48684283,48685547,48685734,48685946,48686081,48686781,48688054,48688300,48688660,48689320,48691107 48683985,48684423,48685633,48685836,48685987,48686134,48686955,48688096,48688453,48689066,48689434,48691427 Gene ID= ENSG00000015285.10 TPM= 6.34 Transcript Type= protein_coding chrX 48696595 48709012 48696595 48709012 + ENST00000376687.3@SUV39H1 ENST00000376687.3 protein_coding 48696595,48698902,48700091,48706265,48706498,48707437 48696803,48699047,48700753,48706411,48706627,48709012 Gene ID= ENSG00000101945.16 TPM= 5.43 Transcript Type= protein_coding chrX 48801995 48824976 48801995 48824976 + ENST00000334136.9@HDAC6 ENST00000334136.9 protein_coding 48801995,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544 48802142,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824976 Gene ID= ENSG00000094631.18 TPM= 15.92 Transcript Type= protein_coding chrX 48802123 48824970 48802123 48824970 + transcript737.chrX.nic@HDAC6 transcript737.chrX.nic protein_coding 48802123,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544 48802235,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824970 Gene ID= ENSG00000094631.18 TPM= 16.83 Transcript Type= NA chrX 48802168 48824970 48802168 48824970 + transcript738.chrX.nic@HDAC6 transcript738.chrX.nic protein_coding 48802168,48802663,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544 48802272,48802785,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824970 Gene ID= ENSG00000094631.18 TPM= 11.39 Transcript Type= NA chrX 48802183 48824970 48802183 48824970 + transcript741.chrX.nic@HDAC6 transcript741.chrX.nic protein_coding 48802183,48802871,48803128,48805438,48805631,48806368,48806609,48808033,48808258,48814440,48814675,48814834,48814962,48815384,48815575,48815884,48816141,48816465,48817326,48818041,48818220,48820106,48822620,48822912,48823672,48823922,48824166,48824544 48802272,48802999,48803216,48805522,48805671,48806464,48806706,48808137,48808326,48814566,48814740,48814893,48815051,48815490,48815642,48816052,48816269,48816633,48817459,48818109,48818412,48820255,48822794,48823588,48823785,48824068,48824294,48824970 Gene ID= ENSG00000094631.18 TPM= 6.57 Transcript Type= NA chrX 48831094 48835633 48831094 48835633 - ENST00000218230.5@PCSK1N ENST00000218230.5 protein_coding 48835419,48831869,48831094 48835633,48832341,48831455 Gene ID= ENSG00000102109.8 TPM= 1.81 Transcript Type= protein_coding chrX 48893448 48897793 48893448 48897793 - transcript755.chrX.nic@TIMM17B transcript755.chrX.nic protein_coding 48897724,48896759,48895038,48894097,48893900,48893448 48897793,48896858,48895101,48894225,48894010,48893817 Gene ID= ENSG00000126768.12 TPM= 67.01 Transcript Type= NA chrX 48897282 48903142 48897282 48903142 + transcript756.chrX.nnic@PQBP1 transcript756.chrX.nnic protein_coding 48897282,48901190,48901519,48901930,48902233,48902928 48898576,48901301,48901605,48902042,48902795,48903142 Gene ID= ENSG00000102103.15 TPM= 1.81 Transcript Type= NA chrX 48897912 48903142 48897912 48903142 + ENST00000376563.5@PQBP1 ENST00000376563.5 protein_coding 48897912,48898492,48901190,48901930,48902233,48902732,48902928 48898093,48898576,48901301,48902042,48902517,48902795,48903142 Gene ID= ENSG00000102103.15 TPM= 14.49 Transcript Type= protein_coding chrX 48898256 48903142 48898256 48903142 + ENST00000396763.5@PQBP1 ENST00000396763.5 protein_coding 48898256,48898492,48901190,48901930,48902233,48902732,48902928 48898346,48898576,48901301,48902042,48902517,48902795,48903142 Gene ID= ENSG00000102103.15 TPM= 4.53 Transcript Type= protein_coding chrX 48903184 48911958 48903184 48911958 - ENST00000376521.6@SLC35A2 ENST00000376521.6 protein_coding 48911546,48909814,48906392,48903184 48911958,48909996,48906543,48905482 Gene ID= ENSG00000102100.15 TPM= 45.28 Transcript Type= protein_coding chrX 48903613 48911669 48903613 48911669 - ENST00000445167.7@SLC35A2 ENST00000445167.7 protein_coding 48911546,48909814,48906392,48903613 48911669,48909996,48906543,48904892 Gene ID= ENSG00000102100.15 TPM= 5.43 Transcript Type= protein_coding chrX 48913182 48919024 48913182 48919024 - ENST00000376509.4@PIM2 ENST00000376509.4 protein_coding 48918774,48918536,48917781,48915020,48914395,48913182 48919024,48918645,48917831,48915392,48914571,48914294 Gene ID= ENSG00000102096.9 TPM= 18.11 Transcript Type= protein_coding chrX 48922211 48958387 48922211 48958387 - transcript773.chrX.nnic@OTUD5 transcript773.chrX.nnic protein_coding 48958329,48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48923137,48922211 48958387,48957452,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295,48922910 Gene ID= ENSG00000068308.13 TPM= 5.8 Transcript Type= NA chrX 48922207 48957911 48922207 48957911 - transcript775.chrX.nnic@OTUD5 transcript775.chrX.nnic protein_coding 48957532,48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922207 48957911,48957450,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295 Gene ID= ENSG00000068308.13 TPM= 9.12 Transcript Type= NA chrX 48922209 48957917 48922209 48957917 - transcript785.chrX.nic@OTUD5 transcript785.chrX.nic protein_coding 48956977,48944190,48934954,48934464,48925847,48923851,48923633,48922209 48957917,48944283,48935018,48934867,48926050,48924052,48923746,48923295 Gene ID= ENSG00000068308.13 TPM= 4.23 Transcript Type= NA chrX 48922212 48957599 48922212 48957599 - ENST00000376488.7@OTUD5 ENST00000376488.7 protein_coding 48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922212 48957599,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295 Gene ID= ENSG00000068308.13 TPM= 35.68 Transcript Type= protein_coding chrX 48922640 48957894 48922640 48957894 - ENST00000610466.4@OTUD5 ENST00000610466.4 protein_coding 48957521,48957473,48956977,48944190,48934954,48934711,48934464,48925847,48923851,48923633,48922640 48957894,48957480,48957440,48944283,48935018,48934867,48934612,48926050,48924052,48923746,48923295 Gene ID= ENSG00000068308.13 TPM= 4.89 Transcript Type= protein_coding chrX 48973718 49002261 48973718 49002261 - transcript789.chrX.nnic@GRIPAP1 transcript789.chrX.nnic protein_coding 49002188,49000566,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973718 49002261,49000685,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285 Gene ID= ENSG00000068400.13 TPM= 5.96 Transcript Type= NA chrX 48973718 49002264 48973718 49002264 - transcript791.chrX.nnic@GRIPAP1 transcript791.chrX.nnic protein_coding 49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973718 49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975291,48974285 Gene ID= ENSG00000068400.13 TPM= 5.78 Transcript Type= NA chrX 48973718 49002264 48973718 49002264 - transcript797.chrX.nnic@GRIPAP1 transcript797.chrX.nnic protein_coding 49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48986165,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48975155,48973718 49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48986239,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48974285 Gene ID= ENSG00000068400.13 TPM= 3.06 Transcript Type= NA chrX 48973718 49002264 48973718 49002264 - transcript799.chrX.nic@GRIPAP1 transcript799.chrX.nic protein_coding 49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973718 49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285 Gene ID= ENSG00000068400.13 TPM= 3.24 Transcript Type= NA chrX 48973718 49002264 48973718 49002264 - transcript800.chrX.nic@GRIPAP1 transcript800.chrX.nic protein_coding 49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48975155,48973718 49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48974285 Gene ID= ENSG00000068400.13 TPM= 6.68 Transcript Type= NA chrX 48973723 49002264 48973723 49002264 - ENST00000376423.8@GRIPAP1 ENST00000376423.8 protein_coding 49002188,48999438,48999238,48998154,48997250,48993428,48990926,48990685,48989972,48989835,48989611,48988121,48987785,48985268,48983775,48983228,48982979,48981795,48981596,48981416,48981215,48978305,48976241,48976018,48975155,48973723 49002264,48999504,48999299,48998180,48997357,48993578,48991110,48990732,48990003,48989882,48989710,48988198,48987877,48985402,48983870,48983440,48983092,48981872,48981691,48981472,48981314,48978435,48976363,48976111,48975309,48974285 Gene ID= ENSG00000068400.13 TPM= 104.66 Transcript Type= protein_coding chrX 49028731 49043486 49028731 49043486 - ENST00000315869.7@TFE3 ENST00000315869.7 protein_coding 49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028731 49043486,49040568,49039410,49038442,49038114,49034251,49033782,49033540,49031544,49030601 Gene ID= ENSG00000068323.16 TPM= 110.93 Transcript Type= protein_coding chrX 49028726 49043410 49028726 49043410 - ENST00000493583.5@TFE3 ENST00000493583.5 protein_coding 49043111,49040455,49039107,49038197,49038010,49034134,49033726,49033465,49031397,49028726 49043410,49040568,49039345,49038442,49038114,49034251,49033782,49033540,49031544,49030601 Gene ID= ENSG00000068323.16 TPM= 103.68 Transcript Type= nonsense_mediated_decay chrX 49071156 49074071 49071156 49074071 - ENST00000553851.2@PRAF2 ENST00000553851.2 protein_coding 49073809,49072433,49071156 49074071,49072650,49072008 Gene ID= ENSG00000243279.3 TPM= 59.77 Transcript Type= protein_coding chrX 49074443 49079923 49074443 49079923 - transcript819.chrX.nic@WDR45 transcript819.chrX.nic protein_coding 49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074443 49079923,49078112,49077911,49077747,49076750,49076524,49075945,49075663,49075465,49075281,49074912 Gene ID= ENSG00000196998.17 TPM= 10.11 Transcript Type= NA chrX 49074443 49080294 49074443 49080294 - transcript822.chrX.nic@WDR45 transcript822.chrX.nic protein_coding 49079939,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074443 49080294,49078112,49077911,49077747,49076750,49076524,49075945,49075753,49075465,49075281,49074912 Gene ID= ENSG00000196998.17 TPM= 5.28 Transcript Type= NA chrX 49074443 49079923 49074443 49079923 - transcript830.chrX.nic@WDR45 transcript830.chrX.nic protein_coding 49079751,49078041,49076645,49076430,49075866,49075545,49075364,49075136,49074443 49079923,49078112,49077911,49076524,49075945,49075753,49075465,49075281,49074912 Gene ID= ENSG00000196998.17 TPM= 7.09 Transcript Type= NA chrX 49074640 49079898 49074640 49079898 - ENST00000322995.13@WDR45 ENST00000322995.13 protein_coding 49079751,49078041,49077837,49077643,49076645,49076430,49075866,49075545,49075364,49075136,49074640 49079898,49078112,49077911,49077747,49076750,49076524,49075978,49075753,49075465,49075281,49074912 Gene ID= ENSG00000196998.17 TPM= 2.87 Transcript Type= protein_coding chrX 49113389 49123801 49113389 49123801 - ENST00000156109.6@GPKOW ENST00000156109.6 protein_coding 49123547,49122622,49122398,49119705,49117597,49117030,49116221,49115891,49115726,49113853,49113389 49123801,49122776,49122522,49119814,49117810,49117162,49116323,49116014,49115795,49113938,49113755 Gene ID= ENSG00000068394.10 TPM= 34.41 Transcript Type= protein_coding chrX 49171926 49175239 49171926 49175239 + ENST00000376327.5@PLP2 ENST00000376327.5 protein_coding 49171926,49173129,49173388,49174335,49174672 49172096,49173281,49173483,49174425,49175239 Gene ID= ENSG00000102007.10 TPM= 105.04 Transcript Type= protein_coding chrX 49175554 49186392 49175554 49186392 - ENST00000599218.5@PRICKLE3 ENST00000599218.5 protein_coding 49186256,49184625,49183734,49179693,49179251,49178272,49177993,49176903,49175554 49186392,49184710,49183917,49179806,49179388,49178475,49178179,49177202,49176265 Gene ID= ENSG00000012211.12 TPM= 5.43 Transcript Type= protein_coding chrX 49187804 49200259 49187804 49200259 - ENST00000263233.8@SYP ENST00000263233.8 protein_coding 49200151,49198968,49197715,49194166,49193272,49191433,49187804 49200259,49199033,49197839,49194361,49193463,49191763,49189282 Gene ID= ENSG00000102003.10 TPM= 22.64 Transcript Type= protein_coding chrX 49235452 49250525 49235452 49250525 + transcript854.chrX.nnic@CCDC22 transcript854.chrX.nnic protein_coding 49235452,49237086,49242016,49242886,49243118,49243284,49246731,49247649,49248191,49248407,49248633,49248817,49249167,49249509,49249651,49250148 49235686,49237263,49242148,49242992,49243184,49243462,49246925,49247768,49248310,49248523,49248734,49248924,49249262,49249568,49249725,49250525 Gene ID= ENSG00000101997.12 TPM= 1.81 Transcript Type= NA chrX 49235467 49250526 49235467 49250526 + ENST00000376227.3@CCDC22 ENST00000376227.3 protein_coding 49235467,49237086,49242016,49242886,49243118,49243284,49246731,49247496,49247649,49248191,49248407,49248633,49248817,49249167,49249509,49249651,49250148 49235686,49237263,49242148,49242992,49243184,49243462,49246925,49247558,49247768,49248310,49248523,49248734,49248924,49249262,49249568,49249725,49250526 Gene ID= ENSG00000101997.12 TPM= 54.33 Transcript Type= protein_coding chrX 49269820 49301461 49269820 49301461 + transcript857.chrX.nnic@PPP1R3F transcript857.chrX.nnic protein_coding 49269820,49281406,49281981,49299276,49301351 49270873,49281461,49282063,49299435,49301461 Gene ID= ENSG00000049769.12 TPM= 4.53 Transcript Type= NA chrX 49269854 49288095 49269854 49288095 + ENST00000055335.10@PPP1R3F ENST00000055335.10 protein_coding 49269854,49281406,49281981,49285834 49270873,49281461,49282063,49288095 Gene ID= ENSG00000049769.12 TPM= 14.49 Transcript Type= protein_coding chrX 49830354 49833964 49830354 49833964 + transcript859.chrX.nic@PAGE4 transcript859.chrX.nic protein_coding 49830354,49830997,49832525,49833846 49830506,49831084,49832650,49833964 Gene ID= ENSG00000101951.16 TPM= 1.81 Transcript Type= NA chrX 49876724 49879241 49876724 49879241 - ENST00000437322.2@USP27X-AS1 ENST00000437322.2 lincRNA 49879091,49876724 49879241,49878747 Gene ID= ENSG00000234390.4 TPM= 1.81 Transcript Type= lincRNA chrX 51332830 51337525 51332830 51337525 + ENST00000356450.2@NUDT10 ENST00000356450.2 protein_coding 51332830,51336239 51333459,51337525 Gene ID= ENSG00000122824.10 TPM= 7.24 Transcript Type= protein_coding chrX 51490011 51496596 51490011 51496596 - ENST00000375992.3@NUDT11 ENST00000375992.3 protein_coding 51495951,51490011 51496596,51491749 Gene ID= ENSG00000196368.4 TPM= 4.53 Transcript Type= protein_coding chrX 51803007 51902354 51803007 51902354 + ENST00000375772.7@MAGED1 ENST00000375772.7 protein_coding 51803007,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146 51803117,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902354 Gene ID= ENSG00000179222.17 TPM= 73.64 Transcript Type= protein_coding chrX 51893533 51902354 51893533 51902354 + ENST00000375722.5@MAGED1 ENST00000375722.5 protein_coding 51893533,51894276,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146 51893755,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902354 Gene ID= ENSG00000179222.17 TPM= 16.82 Transcript Type= protein_coding chrX 51893602 51902357 51893602 51902357 + ENST00000326587.11@MAGED1 ENST00000326587.11 protein_coding 51893602,51894269,51895053,51896409,51897208,51897547,51897795,51898114,51898285,51898581,51900182,51901553,51902146 51893755,51894349,51895760,51897077,51897271,51897626,51897886,51898193,51898327,51898643,51900296,51901938,51902357 Gene ID= ENSG00000179222.17 TPM= 377 Transcript Type= protein_coding chrX 52898550 52908560 52898550 52908560 + ENST00000416841.6@FAM156B ENST00000416841.6 protein_coding 52898550,52900568,52907109 52899541,52900660,52908560 Gene ID= ENSG00000179304.16 TPM= 4.53 Transcript Type= protein_coding chrX 52897400 52908556 52897400 52908556 + ENST00000593751.7@FAM156B ENST00000593751.7 protein_coding 52897400,52899468,52900568,52907109 52898726,52899541,52900660,52908556 Gene ID= ENSG00000179304.16 TPM= 8.15 Transcript Type= protein_coding chrX 52947258 52958414 52947258 52958414 - ENST00000596733.7@FAM156A ENST00000596733.7 protein_coding 52957088,52956273,52955154,52947258 52958414,52956346,52955246,52948705 Gene ID= ENSG00000268350.7 TPM= 7.7 Transcript Type= protein_coding chrX 52947254 52958484 52947254 52958484 - ENST00000622447.4@FAM156A ENST00000622447.4 protein_coding 52956273,52955154,52947254 52958484,52955246,52948705 Gene ID= ENSG00000268350.7 TPM= 40.3 Transcript Type= protein_coding chrX 53081921 53088546 53081921 53088546 + transcript888.chrX.nic@TSPYL2 transcript888.chrX.nic protein_coding 53081921,53084532,53084755,53084954,53085227,53085631,53087776 53083305,53084622,53084866,53085099,53085321,53086310,53088546 Gene ID= ENSG00000184205.14 TPM= 66.74 Transcript Type= NA chrX 53082364 53088546 53082364 53088546 + transcript894.chrX.nic@TSPYL2 transcript894.chrX.nic protein_coding 53082364,53084532,53084954,53085227,53085631,53087776 53083305,53084866,53085099,53085321,53086310,53088546 Gene ID= ENSG00000184205.14 TPM= 7.7 Transcript Type= NA chrX 53082367 53088540 53082367 53088540 + ENST00000375442.8@TSPYL2 ENST00000375442.8 protein_coding 53082367,53084545,53084755,53084954,53085227,53085631,53087776 53083305,53084622,53084866,53085099,53085321,53086310,53088540 Gene ID= ENSG00000184205.14 TPM= 189.89 Transcript Type= protein_coding chrX 53191470 53225225 53191470 53225225 - transcript910.chrX.nnic@KDM5C transcript910.chrX.nnic protein_coding 53224740,53220839,53218276,53217796,53217143,53216074,53215795,53214689,53211787,53211497,53210676,53210414,53201854,53201550,53198977,53198764,53198490,53197771,53196686,53195916,53195231,53194931,53194139,53193773,53193437,53191470 53225225,53220916,53218398,53217966,53217277,53216197,53215976,53214847,53211906,53211655,53210857,53210576,53201973,53201744,53199158,53198888,53198637,53197876,53197044,53196054,53195410,53195068,53194738,53193851,53193636,53191622 Gene ID= ENSG00000126012.11 TPM= 2.11 Transcript Type= NA chrX 53192152 53225422 53192152 53225422 - ENST00000375401.7@KDM5C ENST00000375401.7 protein_coding 53224740,53220839,53218276,53217796,53217143,53216074,53215795,53214689,53211787,53211497,53210676,53210414,53201854,53201550,53198977,53198764,53198490,53197771,53196686,53195916,53195231,53194931,53194139,53193773,53193437,53192152 53225422,53220916,53218398,53217966,53217277,53216197,53215976,53214847,53211906,53211655,53210857,53210576,53201973,53201744,53199158,53198888,53198637,53197876,53197044,53196054,53195410,53195068,53194738,53193851,53193636,53193332 Gene ID= ENSG00000126012.11 TPM= 22.03 Transcript Type= protein_coding chrX 53228796 53321366 53228796 53321366 - transcript922.chrX.nic@IQSEC2 transcript922.chrX.nic protein_coding 53320417,53291895,53255800,53254530,53250279,53248721,53248114,53246969,53243332,53241784,53239195,53238145,53236322,53228796 53321366,53291924,53256061,53254931,53251174,53248882,53248236,53247135,53243471,53241909,53239294,53238306,53236495,53231870 Gene ID= ENSG00000124313.13 TPM= 1.81 Transcript Type= NA chrX 53266329 53281594 53266329 53281594 - ENST00000485377.5@IQSEC2 ENST00000485377.5 protein_coding 53281496,53266329 53281594,53267064 Gene ID= ENSG00000124313.13 TPM= 2.72 Transcript Type= protein_coding chrX 53266328 53281598 53266328 53281598 - ENST00000639161.1@IQSEC2 ENST00000639161.1 protein_coding 53281496,53279564,53266328 53281598,53279659,53267064 Gene ID= ENSG00000124313.13 TPM= 8.15 Transcript Type= protein_coding chrX 53374149 53422728 53374149 53422728 - ENST00000322213.8@SMC1A ENST00000322213.8 protein_coding 53422492,53414981,53414758,53413232,53412900,53411995,53411761,53409421,53409062,53405771,53405493,53405245,53405012,53403777,53403566,53399589,53396472,53396227,53394778,53383097,53382506,53382232,53381018,53380620,53374149 53422728,53415169,53414870,53413435,53413138,53412253,53411901,53409503,53409269,53405956,53405672,53405391,53405149,53403893,53403672,53399730,53396617,53396380,53394888,53383253,53382660,53382383,53381087,53380730,53380186 Gene ID= ENSG00000072501.17 TPM= 27.17 Transcript Type= protein_coding chrX 53422903 53431107 53422903 53431107 + transcript934.chrX.nic@RIBC1 transcript934.chrX.nic protein_coding 53422903,53423314,53426277,53428003,53429854,53430396,53430907 53423004,53423402,53426393,53428084,53429972,53430790,53431107 Gene ID= ENSG00000158423.16 TPM= 3.62 Transcript Type= NA chrX 53431258 53434373 53431258 53434373 - ENST00000168216.10@HSD17B10 ENST00000168216.10 protein_coding 53434319,53433722,53432247,53431988,53431798,53431258 53434373,53433886,53432411,53432116,53431906,53431594 Gene ID= ENSG00000072506.12 TPM= 85.12 Transcript Type= protein_coding chrX 53936682 54044357 53936682 54044357 - transcript944.chrX.nic@PHF8 transcript944.chrX.nic protein_coding 54043762,54042631,54022758,54022259,54017661,54016595,54014377,54011122,54002595,54002155,53999870,53995693,53993601,53992736,53987766,53987078,53985816,53984914,53962844,53944134,53940180,53939162,53936682 54044357,54042820,54022843,54022367,54017821,54016736,54014563,54011284,54002682,54002261,53999961,53995782,53993903,53992839,53987944,53987163,53985949,53985227,53962939,53944243,53940516,53939246,53938059 Gene ID= ENSG00000172943.19 TPM= 4.53 Transcript Type= NA chrX 53943125 54044329 53943125 54044329 - transcript946.chrX.nic@PHF8 transcript946.chrX.nic protein_coding 54043762,54042631,54022758,54022259,54017661,54016595,54014377,54011122,54002595,54002155,53999870,53995693,53992736,53987766,53987078,53985816,53984914,53962844,53944134,53943125 54044329,54042820,54022843,54022367,54017821,54016736,54014563,54011284,54002682,54002261,53999961,53995782,53992839,53987944,53987163,53985949,53985227,53962939,53944243,53943402 Gene ID= ENSG00000172943.19 TPM= 1.81 Transcript Type= NA chrX 54068324 54183255 54068324 54183255 - ENST00000375180.6@FAM120C ENST00000375180.6 protein_coding 54182500,54159370,54157689,54151245,54136491,54135528,54134831,54133773,54132692,54116545,54091312,54087755,54085715,54081322,54080232,54068324 54183255,54159616,54157771,54151373,54136590,54135604,54135111,54134046,54132863,54116794,54091426,54087964,54085916,54081460,54080289,54073287 Gene ID= ENSG00000184083.11 TPM= 2.72 Transcript Type= protein_coding chrX 54173789 54183281 54173789 54183281 - ENST00000477084.1@FAM120C ENST00000477084.1 protein_coding 54182500,54173789 54183281,54174146 Gene ID= ENSG00000184083.11 TPM= 5.43 Transcript Type= protein_coding chrX 54440401 54445487 54440401 54445487 + ENST00000375151.4@TSR2 ENST00000375151.4 protein_coding 54440401,54440690,54443400,54444008,54444416 54440502,54440780,54443491,54444184,54445487 Gene ID= ENSG00000158526.7 TPM= 89.65 Transcript Type= protein_coding chrX 54445454 54496166 54445454 54496166 - ENST00000375135.3@FGD1 ENST00000375135.3 protein_coding 54495126,54471314,54470583,54470016,54468787,54467784,54465696,54465451,54456509,54456220,54455692,54455448,54450271,54449659,54449143,54448806,54447311,54445454 54496166,54471487,54470760,54470457,54468876,54467932,54465852,54465589,54456567,54456366,54455784,54455527,54450301,54449760,54449268,54448967,54447454,54446414 Gene ID= ENSG00000102302.7 TPM= 18.11 Transcript Type= protein_coding chrX 54530211 54561071 54530211 54561071 + ENST00000336470.8@GNL3L ENST00000336470.8 protein_coding 54530211,54532520,54539040,54540135,54541273,54542955,54543207,54544223,54548229,54550963,54551568,54551832,54552292,54554565,54558436,54560520 54530302,54532585,54539101,54540242,54541389,54543038,54543342,54544326,54548373,54551050,54551742,54551974,54552428,54554692,54558655,54561071 Gene ID= ENSG00000130119.15 TPM= 6.34 Transcript Type= protein_coding chrX 54530242 54560763 54530242 54560763 + ENST00000360845.2@GNL3L ENST00000360845.2 protein_coding 54530242,54532520,54539040,54540135,54541273,54542955,54543207,54544223,54548229,54550963,54551568,54551832,54552292,54554565,54558436,54560520 54530419,54532585,54539101,54540242,54541389,54543038,54543342,54544326,54548373,54551050,54551742,54551974,54552428,54554692,54558655,54560763 Gene ID= ENSG00000130119.15 TPM= 1.81 Transcript Type= protein_coding chrX 54808991 54816019 54808991 54816019 + transcript986.chrX.nic@MAGED2 transcript986.chrX.nic protein_coding 54808991,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881 54809223,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816019 Gene ID= ENSG00000102316.16 TPM= 25.92 Transcript Type= NA chrX 54807675 54816019 54807675 54816019 + transcript989.chrX.nic@MAGED2 transcript989.chrX.nic protein_coding 54807675,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54814661,54815248,54815881 54807802,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813550,54814775,54815690,54816019 Gene ID= ENSG00000102316.16 TPM= 13.92 Transcript Type= NA chrX 54808945 54816019 54808945 54816019 + transcript994.chrX.nic@MAGED2 transcript994.chrX.nic protein_coding 54808945,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881 54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816019 Gene ID= ENSG00000102316.16 TPM= 25.01 Transcript Type= NA chrX 54808371 54816007 54808371 54816007 + ENST00000375058.5@MAGED2 ENST00000375058.5 protein_coding 54808371,54809303,54809722,54810821,54811250,54811574,54812157,54812945,54813118,54813488,54814661,54815248,54815881 54808433,54809376,54810213,54811129,54811313,54811653,54812251,54813024,54813160,54813550,54814775,54815690,54816007 Gene ID= ENSG00000102316.16 TPM= 74.03 Transcript Type= protein_coding chrX 55000357 55009057 55000357 55009057 + ENST00000374987.3@APEX2 ENST00000374987.3 protein_coding 55000357,55001546,55002251,55002962,55003799,55006518 55000579,55001629,55002431,55003108,55003868,55009057 Gene ID= ENSG00000169188.4 TPM= 42.56 Transcript Type= protein_coding chrX 55143102 55161310 55143102 55161310 - ENST00000358460.8@FAM104B ENST00000358460.8 protein_coding 55161137,55159129,55146181,55143102 55161310,55159228,55146311,55143875 Gene ID= ENSG00000182518.13 TPM= 2.72 Transcript Type= protein_coding chrX 55717727 55758773 55717727 55758773 + transcript1027.chrX.nic@RRAGB transcript1027.chrX.nic protein_coding 55717727,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216,55758246 55717788,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55757331,55758773 Gene ID= ENSG00000083750.12 TPM= 1.81 Transcript Type= NA chrX 55717739 55758774 55717739 55758774 + ENST00000374941.8@RRAGB ENST00000374941.8 protein_coding 55717739,55719314,55722186,55729294,55731364,55751101,55753392,55755841,55757216,55758246 55718419,55719347,55722285,55729360,55731586,55751196,55753514,55755932,55757331,55758774 Gene ID= ENSG00000083750.12 TPM= 32.6 Transcript Type= protein_coding chrX 55908232 56205286 55908232 56205286 + transcript1028.chrX.nnic@AL445472.1 transcript1028.chrX.nnic lincRNA 55908232,56014845,56204973 55908800,56014961,56205286 Gene ID= ENSG00000227486.1 TPM= 2.26 Transcript Type= NA chrX 55908123 56015173 55908123 56015173 + ENST00000452532.1@AL445472.1 ENST00000452532.1 lincRNA 55908123,56014845 55908800,56015173 Gene ID= ENSG00000227486.1 TPM= 1.36 Transcript Type= lincRNA chrX 56729259 56818380 56729259 56818380 + ENST00000374922.8@NBDY ENST00000374922.8 protein_coding 56729259,56732063,56817320 56729589,56732199,56818380 Gene ID= ENSG00000204272.12 TPM= 89.65 Transcript Type= protein_coding chrX 56975142 56995730 56975142 56995730 - ENST00000638873.1@SPIN3 ENST00000638873.1 protein_coding 56995216,56994723,56984266,56978580,56978292,56975142 56995730,56994949,56984478,56978660,56978421,56977196 Gene ID= ENSG00000204271.12 TPM= 1.36 Transcript Type= nonsense_mediated_decay chrX 56975142 56995553 56975142 56995553 - ENST00000638819.1@SPIN3 ENST00000638819.1 protein_coding 56995216,56994723,56984266,56978580,56978292,56975142 56995553,56994949,56984478,56978660,56978498,56977196 Gene ID= ENSG00000204271.12 TPM= 3.17 Transcript Type= nonsense_mediated_decay chrX 57119683 57121546 57119683 57121546 - ENST00000333933.3@SPIN2B ENST00000333933.3 protein_coding 57121238,57119683 57121546,57120631 Gene ID= ENSG00000186787.8 TPM= 1.81 Transcript Type= protein_coding chrX 57119682 57121491 57119682 57121491 - ENST00000275988.5@SPIN2B ENST00000275988.5 protein_coding 57121293,57119682 57121491,57120634 Gene ID= ENSG00000186787.8 TPM= 1.81 Transcript Type= protein_coding chrX 63426559 63561061 63426559 63561061 - transcript1049.chrX.nnic@LINC01278 transcript1049.chrX.nnic processed_transcript 63560832,63516910,63432364,63426559 63561061,63517082,63432491,63426996 Gene ID= ENSG00000235437.7 TPM= 1.81 Transcript Type= NA chrX 63426560 63561049 63426560 63561049 - ENST00000609143.5@LINC01278 ENST00000609143.5 processed_transcript 63560832,63432364,63426560 63561049,63432491,63428981 Gene ID= ENSG00000235437.7 TPM= 2.72 Transcript Type= sense_overlapping chrX 63634988 63755125 63634988 63755125 - transcript1057.chrX.nic@ARHGEF9 transcript1057.chrX.nic protein_coding 63754921,63754304,63724532,63706258,63697125,63678340,63674038,63665886,63655494,63643980,63634988 63755125,63754676,63724711,63706449,63697304,63678572,63674167,63666017,63655737,63644048,63638209 Gene ID= ENSG00000131089.15 TPM= 5.43 Transcript Type= NA chrX 63634988 63785213 63634988 63785213 - transcript1060.chrX.nic@ARHGEF9 transcript1060.chrX.nic protein_coding 63785116,63724532,63706258,63697125,63678340,63674038,63665886,63655494,63643980,63634988 63785213,63724711,63706449,63697304,63678572,63674167,63666017,63655737,63644048,63638209 Gene ID= ENSG00000131089.15 TPM= 4.53 Transcript Type= NA chrX 64916381 64976484 64916381 64976484 - ENST00000374839.7@ZC4H2 ENST00000374839.7 protein_coding 64976325,64921817,64920081,64919042,64916381 64976484,64921988,64920253,64919204,64917896 Gene ID= ENSG00000126970.15 TPM= 3.62 Transcript Type= protein_coding chrX 65512582 65534756 65512582 65534756 - ENST00000374811.7@LAS1L ENST00000374811.7 protein_coding 65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524564,65524056,65523560,65517987,65514823,65512582 65534756,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524614,65524262,65523707,65518465,65514973,65512901 Gene ID= ENSG00000001497.16 TPM= 17.66 Transcript Type= protein_coding chrX 65512582 65534754 65512582 65534754 - ENST00000374807.9@LAS1L ENST00000374807.9 protein_coding 65534480,65533610,65532561,65531357,65529594,65529212,65528260,65524965,65524056,65523560,65517987,65514823,65512582 65534754,65533735,65532630,65531438,65529878,65529258,65528369,65525050,65524262,65523707,65518465,65514973,65512901 Gene ID= ENSG00000001497.16 TPM= 29.43 Transcript Type= protein_coding chrX 65667670 65741931 65667670 65741931 + ENST00000360270.6@MSN ENST00000360270.6 protein_coding 65667670,65716818,65727814,65729438,65731107,65731838,65733184,65735267,65736795,65737178,65738525,65738970,65739729 65667853,65716901,65727909,65729712,65731190,65731984,65733280,65735430,65736925,65737338,65738617,65739194,65741931 Gene ID= ENSG00000147065.16 TPM= 345.01 Transcript Type= protein_coding chrX 66021739 66040132 66021739 66040132 - transcript1096.chrX.nic@VSIG4 transcript1096.chrX.nic protein_coding 66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021739 66040132,66033830,66032749,66028112,66027526,66025129,66022862,66022166 Gene ID= ENSG00000155659.14 TPM= 19.56 Transcript Type= NA chrX 66021739 66040132 66021739 66040132 - transcript1098.chrX.nnic@VSIG4 transcript1098.chrX.nnic protein_coding 66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021739 66040132,66033830,66032749,66028112,66027526,66025129,66022862,66022409 Gene ID= ENSG00000155659.14 TPM= 5.98 Transcript Type= NA chrX 66021738 66040107 66021738 66040107 - ENST00000374737.8@VSIG4 ENST00000374737.8 protein_coding 66039944,66033474,66032468,66028050,66027449,66025025,66022841,66021738 66040107,66033830,66032749,66028112,66027526,66025129,66022862,66022500 Gene ID= ENSG00000155659.14 TPM= 79.78 Transcript Type= protein_coding chrX 66021769 66040060 66021769 66040060 - ENST00000412866.2@VSIG4 ENST00000412866.2 protein_coding 66039944,66033474,66028050,66027449,66025025,66022841,66021769 66040060,66033830,66028112,66027526,66025129,66022862,66022500 Gene ID= ENSG00000155659.14 TPM= 9.96 Transcript Type= protein_coding chrX 66021740 66040125 66021740 66040125 - ENST00000455586.6@VSIG4 ENST00000455586.6 protein_coding 66039944,66033474,66032468,66028050,66027449,66025025,66021740 66040125,66033830,66032749,66028112,66027526,66025129,66022862 Gene ID= ENSG00000155659.14 TPM= 10.05 Transcript Type= protein_coding chrX 66164244 66267387 66164244 66267387 + transcript1108.chrX.nic@HEPH transcript1108.chrX.nic protein_coding 66164244,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197812,66198878,66200540,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266440 66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66200752,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267387 Gene ID= ENSG00000089472.16 TPM= 6.34 Transcript Type= NA chrX 66164220 66267387 66164220 66267387 + transcript1112.chrX.nnic@HEPH transcript1112.chrX.nnic protein_coding 66164220,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197683,66198878,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266440 66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267387 Gene ID= ENSG00000089472.16 TPM= 5.43 Transcript Type= NA chrX 66163977 66267387 66163977 66267387 + transcript1113.chrX.nnic@HEPH transcript1113.chrX.nnic protein_coding 66163977,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197683,66198878,66200540,66203364,66207195,66208115,66258840,66260100,66263644,66266440 66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66200752,66203577,66207334,66208246,66258979,66260262,66263688,66267387 Gene ID= ENSG00000089472.16 TPM= 5.89 Transcript Type= NA chrX 66164359 66267383 66164359 66267383 + ENST00000441993.6@HEPH ENST00000441993.6 protein_coding 66164359,66170558,66172355,66173589,66188359,66189684,66192130,66193502,66195098,66197683,66198878,66200540,66203364,66207195,66208115,66255035,66256105,66258840,66260100,66263644,66266443 66164470,66170737,66172599,66173801,66188541,66189938,66192298,66193638,66195229,66197894,66199028,66200752,66203577,66207334,66208246,66255141,66256330,66258979,66260262,66263688,66267383 Gene ID= ENSG00000089472.16 TPM= 19.47 Transcript Type= protein_coding chrX 68042906 68061325 68042906 68061325 - transcript1123.chrX.nnic@OPHN1 transcript1123.chrX.nnic protein_coding 68061250,68053645,68052540,68048416,68042906 68061325,68053810,68052590,68048457,68047163 Gene ID= ENSG00000079482.12 TPM= 3.62 Transcript Type= NA chrX 68498323 68537285 68498323 68537285 + ENST00000462683.5@YIPF6 ENST00000462683.5 protein_coding 68498323,68511849,68513327,68518770,68521372,68522760,68531881 68499123,68511977,68513405,68518812,68521497,68522917,68537285 Gene ID= ENSG00000181704.11 TPM= 24.45 Transcript Type= protein_coding chrX 68693635 68725841 68693635 68725841 + transcript1128.chrX.nnic@STARD8 transcript1128.chrX.nnic protein_coding 68693635,68712914,68715294,68716368,68717200,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305 68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725841 Gene ID= ENSG00000130052.13 TPM= 2.72 Transcript Type= NA chrX 68693651 68725833 68693651 68725833 + ENST00000374597.3@STARD8 ENST00000374597.3 protein_coding 68693651,68712914,68715294,68716368,68717212,68719225,68720264,68720924,68721536,68722047,68722422,68723626,68723945,68724305 68693826,68712985,68715375,68716431,68718629,68719398,68720423,68721122,68721746,68722161,68722646,68723843,68724121,68725833 Gene ID= ENSG00000130052.13 TPM= 16.3 Transcript Type= protein_coding chrX 68831258 68842159 68831258 68842159 + transcript1135.chrX.nnic@EFNB1 transcript1135.chrX.nnic protein_coding 68831258,68838617,68839664,68839960,68840242 68831314,68838894,68839756,68840088,68842159 Gene ID= ENSG00000090776.5 TPM= 2.72 Transcript Type= NA chrX 68828997 68842147 68828997 68842147 + ENST00000204961.4@EFNB1 ENST00000204961.4 protein_coding 68828997,68838617,68839664,68839960,68840242 68829904,68838894,68839756,68840088,68842147 Gene ID= ENSG00000090776.5 TPM= 63.39 Transcript Type= protein_coding chrX 69160862 69165521 69160862 69165521 - ENST00000361478.1@PJA1 ENST00000361478.1 protein_coding 69165372,69160862 69165521,69163466 Gene ID= ENSG00000181191.11 TPM= 8.15 Transcript Type= protein_coding chrX 69616067 70039469 69616067 70039469 + ENST00000374553.6@EDA ENST00000374553.6 protein_coding 69616067,69957027,70023218,70027857,70029504,70030469,70033398,70035358 69616704,69957132,70023241,70028036,70029538,70030520,70033522,70039469 Gene ID= ENSG00000158813.17 TPM= 4.53 Transcript Type= protein_coding chrX 69957024 70039469 69957024 70039469 + ENST00000616899.1@EDA ENST00000616899.1 protein_coding 69957024,70023218,70027857,70029504,70030469,70033398,70035358 69957132,70023241,70028036,70029538,70030520,70033528,70039469 Gene ID= ENSG00000158813.17 TPM= 6.34 Transcript Type= protein_coding chrX 70133449 70166324 70133449 70166324 + ENST00000342206.10@IGBP1 ENST00000342206.10 protein_coding 70133449,70134523,70146633,70148761,70150210,70165833 70134135,70134816,70146828,70148840,70150322,70166324 Gene ID= ENSG00000089289.15 TPM= 24.45 Transcript Type= protein_coding chrX 70133463 70166324 70133463 70166324 + ENST00000356413.4@IGBP1 ENST00000356413.4 protein_coding 70133463,70133723,70134523,70146633,70148761,70150210,70165833 70133540,70134135,70134816,70146828,70148840,70150322,70166324 Gene ID= ENSG00000089289.15 TPM= 22.64 Transcript Type= protein_coding chrX 70286595 70289979 70286595 70289979 - ENST00000239666.8@PDZD11 ENST00000239666.8 protein_coding 70289860,70289255,70288430,70288117,70287732,70287276,70286595 70289979,70289354,70288513,70288173,70287830,70287336,70287116 Gene ID= ENSG00000120509.10 TPM= 37.13 Transcript Type= protein_coding chrX 70455096 70505485 70455096 70505485 + ENST00000542398.1@DLG3 ENST00000542398.1 protein_coding 70455096,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163 70455263,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505485 Gene ID= ENSG00000082458.11 TPM= 10.71 Transcript Type= protein_coding chrX 70455177 70505487 70455177 70505487 + transcript1155.chrX.nnic@DLG3 transcript1155.chrX.nnic protein_coding 70455177,70479150,70492107,70492521,70493376,70498520,70499176,70499877,70500471,70500898,70502163 70455263,70479264,70492283,70492596,70493475,70498570,70499352,70500049,70500580,70500989,70505487 Gene ID= ENSG00000082458.11 TPM= 3.47 Transcript Type= NA chrX 70452305 70505487 70452305 70505487 + ENST00000374355.7@DLG3 ENST00000374355.7 protein_coding 70452305,70453637,70454214,70479150,70492107,70492521,70493376,70497180,70498520,70499176,70499877,70500471,70500898,70502163 70452755,70453793,70454316,70479264,70492283,70492596,70493475,70497221,70498570,70499277,70500049,70500580,70500989,70505487 Gene ID= ENSG00000082458.11 TPM= 9.35 Transcript Type= protein_coding chrX 71059246 71068423 71059246 71068423 - ENST00000374274.7@SNX12 ENST00000374274.7 protein_coding 71068142,71062854,71061843,71059246 71068423,71062949,71061967,71061118 Gene ID= ENSG00000147164.11 TPM= 9.06 Transcript Type= protein_coding chrX 71096197 71103535 71096197 71103535 + ENST00000374259.7@FOXO4 ENST00000374259.7 protein_coding 71096197,71100684,71102077 71096981,71101740,71103535 Gene ID= ENSG00000184481.16 TPM= 39.84 Transcript Type= protein_coding chrX 71107404 71111631 71107404 71111631 - ENST00000374202.6@IL2RG ENST00000374202.6 protein_coding 71111425,71110897,71110504,71110156,71109228,71108599,71108277,71107404 71111631,71111050,71110688,71110295,71109390,71108695,71108346,71107921 Gene ID= ENSG00000147168.12 TPM= 2.72 Transcript Type= protein_coding chrX 71118532 71142448 71118532 71142448 + transcript1164.chrX.nic@MED12 transcript1164.chrX.nic protein_coding 71118532,71119373,71119686,71120014,71120971,71121327,71121562,71122200,71122508,71122738,71123095,71123594,71124159,71124764,71124976,71125351,71125663,71126036,71126341,71126969,71127336,71127893,71128296,71128598,71129114,71129316,71129680,71130035,71131550,71132073,71132377,71132845,71133123,71134357,71134713,71135092,71136281,71136879,71137187,71137558,71137726,71137856,71140635,71141230,71141883,71142175 71118853,71119477,71119877,71120170,71121152,71121437,71121816,71122346,71122607,71122874,71123226,71123720,71124388,71124844,71125146,71125495,71125713,71126154,71126484,71127132,71127467,71128120,71128440,71128718,71129215,71129429,71129855,71130214,71131621,71132206,71132538,71132956,71133212,71134466,71134848,71135253,71136655,71137029,71137383,71137635,71137780,71137943,71140857,71141370,71141964,71142448 Gene ID= ENSG00000184634.15 TPM= 3.17 Transcript Type= NA chrX 71118556 71142453 71118556 71142453 + ENST00000333646.10@MED12 ENST00000333646.10 protein_coding 71118556,71119373,71119686,71120014,71120971,71121327,71121562,71122200,71122508,71122738,71123095,71123594,71124159,71124764,71124976,71125351,71125663,71126036,71126341,71126969,71127336,71127893,71128296,71128598,71129114,71129316,71129680,71130035,71131550,71132073,71132377,71132845,71133123,71134357,71134713,71135092,71136281,71136879,71137187,71137558,71137726,71140635,71141230,71141883,71142175 71118853,71119477,71119877,71120170,71121152,71121437,71121816,71122346,71122607,71122874,71123226,71123720,71124388,71124844,71125146,71125495,71125713,71126154,71126484,71127132,71127467,71128120,71128440,71128718,71129215,71129429,71129855,71130214,71131621,71132206,71132538,71132956,71133212,71134466,71134848,71135253,71136655,71137029,71137392,71137635,71137943,71140857,71141370,71141964,71142453 Gene ID= ENSG00000184634.15 TPM= 8.9 Transcript Type= protein_coding chrX 71118695 71142454 71118695 71142454 + ENST00000374102.5@MED12 ENST00000374102.5 protein_coding 71118695,71119373,71119686,71120014,71120971,71121327,71121562,71122200,71122508,71122738,71123095,71123594,71124159,71124764,71124976,71125351,71125663,71126036,71126341,71126969,71127336,71127893,71128296,71128598,71129114,71129316,71129680,71130035,71131550,71132073,71132377,71132845,71133123,71134357,71134713,71135092,71136281,71136879,71137187,71137561,71137726,71140635,71141230,71141883,71142175 71118853,71119477,71119877,71120170,71121152,71121437,71121816,71122346,71122607,71122874,71123226,71123720,71124388,71124844,71125146,71125495,71125713,71126154,71126484,71127132,71127467,71128120,71128440,71128718,71129215,71129429,71129855,71130214,71131621,71132206,71132538,71132956,71133212,71134466,71134848,71135253,71136655,71137029,71137383,71137635,71137943,71140857,71141370,71141964,71142454 Gene ID= ENSG00000184634.15 TPM= 1.66 Transcript Type= protein_coding chrX 71118723 71142447 71118723 71142447 + ENST00000374080.7@MED12 ENST00000374080.7 protein_coding 71118723,71119373,71119686,71120014,71120971,71121327,71121562,71122200,71122508,71122738,71123095,71123594,71124159,71124764,71124976,71125351,71125663,71126036,71126341,71126969,71127336,71127893,71128296,71128598,71129114,71129316,71129680,71130035,71131550,71132073,71132377,71132845,71133123,71134357,71134713,71135092,71136281,71136879,71137187,71137558,71137726,71140635,71141230,71141883,71142175 71118853,71119477,71119877,71120170,71121152,71121437,71121816,71122346,71122607,71122874,71123226,71123720,71124388,71124844,71125146,71125495,71125713,71126154,71126484,71127132,71127467,71128120,71128440,71128718,71129215,71129429,71129855,71130214,71131621,71132206,71132538,71132956,71133212,71134466,71134848,71135253,71136655,71137029,71137383,71137635,71137943,71140857,71141370,71141964,71142447 Gene ID= ENSG00000184634.15 TPM= 8.9 Transcript Type= protein_coding chrX 71144829 71169022 71144829 71169022 + transcript1174.chrX.nic@NLGN3 transcript1174.chrX.nic protein_coding 71144829,71147550,71153477,71155214,71164143,71167011 71144964,71148206,71153536,71155363,71164328,71169022 Gene ID= ENSG00000196338.12 TPM= 1.81 Transcript Type= NA chrX 71144831 71171199 71144831 71171199 + ENST00000536169.5@NLGN3 ENST00000536169.5 protein_coding 71144831,71147550,71155214,71164143,71167011,71169254 71144964,71148206,71155363,71164328,71167800,71171199 Gene ID= ENSG00000196338.12 TPM= 4.07 Transcript Type= protein_coding chrX 71144843 71171201 71144843 71171201 + ENST00000374051.7@NLGN3 ENST00000374051.7 protein_coding 71144843,71147550,71153477,71155214,71164143,71167011,71169254 71144964,71148206,71153536,71155363,71164328,71167800,71171201 Gene ID= ENSG00000196338.12 TPM= 8.6 Transcript Type= protein_coding chrX 71239626 71255060 71239626 71255060 - ENST00000373988.5@ZMYM3 ENST00000373988.5 protein_coding 71254468,71252589,71251558,71251178,71250432,71250026,71249461,71249019,71248686,71248438,71248162,71247734,71247345,71246595,71246353,71245986,71245668,71245339,71244790,71244302,71243829,71242970,71242170,71241227,71239626 71255060,71253274,71251601,71251250,71250726,71250203,71249679,71249169,71248801,71248524,71248312,71247906,71247510,71246692,71246512,71246098,71245842,71245485,71244893,71244470,71243980,71243084,71242424,71241344,71241108 Gene ID= ENSG00000147130.14 TPM= 5.43 Transcript Type= protein_coding chrX 71249201 71254161 71249201 71254161 - transcript1179.chrX.nic@ZMYM3 transcript1179.chrX.nic protein_coding 71254029,71252589,71251558,71251178,71250432,71250026,71249201 71254161,71253274,71251601,71251244,71250726,71250203,71249679 Gene ID= ENSG00000147130.14 TPM= 6.34 Transcript Type= NA chrX 71249201 71254709 71249201 71254709 - transcript1181.chrX.nnic@ZMYM3 transcript1181.chrX.nnic protein_coding 71254659,71252589,71251558,71251178,71250432,71250026,71249201 71254709,71253274,71251601,71251244,71250726,71250203,71249679 Gene ID= ENSG00000147130.14 TPM= 2.72 Transcript Type= NA chrX 71249207 71254161 71249207 71254161 - transcript1182.chrX.nnic@ZMYM3 transcript1182.chrX.nnic protein_coding 71254029,71252589,71251558,71251178,71250432,71249461,71249207 71254161,71253274,71251601,71251244,71250726,71250203,71249311 Gene ID= ENSG00000147130.14 TPM= 1.81 Transcript Type= NA chrX 71249201 71254161 71249201 71254161 - transcript1184.chrX.nic@ZMYM3 transcript1184.chrX.nic protein_coding 71254029,71252589,71251558,71251178,71250432,71249201 71254161,71253274,71251601,71251244,71250726,71250203 Gene ID= ENSG00000147130.14 TPM= 3.62 Transcript Type= NA chrX 71239624 71254140 71239624 71254140 - ENST00000314425.9@ZMYM3 ENST00000314425.9 protein_coding 71254029,71252589,71251558,71251178,71250432,71250026,71249461,71249019,71248686,71248438,71248162,71247734,71247345,71246595,71246353,71245986,71245668,71245339,71244790,71244302,71243829,71242970,71242170,71241227,71239624 71254140,71253274,71251601,71251244,71250726,71250203,71249679,71249169,71248801,71248524,71248312,71247906,71247510,71246692,71246512,71246098,71245842,71245485,71244893,71244470,71243980,71243084,71242424,71241344,71241108 Gene ID= ENSG00000147130.14 TPM= 9.06 Transcript Type= protein_coding chrX 71249201 71254140 71249201 71254140 - ENST00000373982.5@ZMYM3 ENST00000373982.5 protein_coding 71254029,71252589,71251558,71251178,71250432,71250026,71249201 71254140,71253274,71251601,71251250,71250726,71250203,71249679 Gene ID= ENSG00000147130.14 TPM= 5.43 Transcript Type= protein_coding chrX 71249204 71254575 71249204 71254575 - ENST00000373981.5@ZMYM3 ENST00000373981.5 protein_coding 71254481,71252589,71251558,71251178,71250432,71250026,71249204 71254575,71253274,71251601,71251244,71250726,71250203,71249679 Gene ID= ENSG00000147130.14 TPM= 1.81 Transcript Type= protein_coding chrX 71254836 71272787 71254836 71272787 - transcript1187.chrX.nnic@ZMYM3 transcript1187.chrX.nnic protein_coding 71272285,71266631,71264842,71254836 71272787,71266727,71265064,71255000 Gene ID= ENSG00000147130.14 TPM= 1.81 Transcript Type= NA chrX 71283635 71301168 71283635 71301168 + transcript1195.chrX.nic@NONO transcript1195.chrX.nic protein_coding 71283635,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298707,71299942 71283721,71284453,71290791,71291972,71294528,71296660,71297047,71297461,71298508,71298816,71301168 Gene ID= ENSG00000147140.15 TPM= 18.11 Transcript Type= NA chrX 71283613 71301168 71283613 71301168 + transcript1197.chrX.nic@NONO transcript1197.chrX.nic protein_coding 71283613,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71298707,71299942 71283721,71284453,71290791,71291972,71294528,71296660,71297047,71298508,71298816,71301168 Gene ID= ENSG00000147140.15 TPM= 19.92 Transcript Type= NA chrX 71283583 71301168 71283583 71301168 + ENST00000276079.12@NONO ENST00000276079.12 protein_coding 71283583,71284397,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942 71283721,71284453,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168 Gene ID= ENSG00000147140.15 TPM= 253.1 Transcript Type= protein_coding chrX 71283633 71301168 71283633 71301168 + ENST00000373841.5@NONO ENST00000373841.5 protein_coding 71283633,71290629,71291779,71294227,71296565,71296851,71297377,71297836,71298469,71298707,71299942 71283721,71290791,71291972,71294528,71296660,71297047,71297461,71297938,71298508,71298816,71301168 Gene ID= ENSG00000147140.15 TPM= 40.3 Transcript Type= protein_coding chrX 71366239 71466004 71366239 71466004 + ENST00000423759.5@TAF1 ENST00000423759.5 protein_coding 71366239,71367499,71368054,71375167,71376950,71377603,71378235,71378824,71381743,71382536,71382761,71382991,71383962,71384945,71387261,71388237,71388738,71389585,71392569,71392875,71393301,71394067,71397253,71398572,71401528,71406638,71407574,71407974,71421309,71423117,71423974,71424154,71454170,71454741,71455007,71458241,71459552,71460626,71463824 71366494,71367613,71368170,71375286,71377191,71377821,71378453,71379031,71381919,71382663,71382868,71383164,71384135,71385049,71387461,71388378,71388868,71389665,71392718,71392994,71393476,71394245,71397466,71398737,71401739,71406746,71407672,71408151,71421376,71423239,71424066,71424238,71454237,71454857,71455012,71458366,71459708,71460803,71466004 Gene ID= ENSG00000147133.15 TPM= 4.53 Transcript Type= protein_coding chrX 71533083 71575897 71533083 71575897 + ENST00000373719.7@OGT ENST00000373719.7 protein_coding 71533083,71536178,71537829,71544567,71547907,71554513,71555190,71555954,71556680,71556952,71557195,71557493,71559267,71559588,71561775,71562847,71563130,71563329,71564601,71567500,71567993,71573620 71533336,71536358,71538072,71544635,71548023,71554592,71555385,71556094,71556780,71557105,71557296,71557672,71559425,71559677,71561900,71563017,71563246,71563499,71564753,71567752,71568116,71575897 Gene ID= ENSG00000147162.13 TPM= 16.3 Transcript Type= protein_coding chrX 72127110 72131901 72127110 72131901 - ENST00000479991.1@RTL5 ENST00000479991.1 protein_coding 72128164,72127110 72131901,72127710 Gene ID= ENSG00000242732.4 TPM= 3.62 Transcript Type= nonsense_mediated_decay chrX 72181679 72198344 72181679 72198344 + ENST00000373669.6@PIN4 ENST00000373669.6 protein_coding 72181679,72186461,72196785,72197368 72181828,72186534,72196904,72198344 Gene ID= ENSG00000102309.12 TPM= 26.26 Transcript Type= protein_coding chrX 72181676 72198337 72181676 72198337 + ENST00000218432.9@PIN4 ENST00000218432.9 protein_coding 72181676,72186461,72196785 72181828,72186534,72198337 Gene ID= ENSG00000102309.12 TPM= 1.81 Transcript Type= protein_coding chrX 72181759 72197535 72181759 72197535 + transcript1209.chrX.nnic@PIN4 transcript1209.chrX.nnic protein_coding 72181759,72196785,72197368 72181828,72196904,72197535 Gene ID= ENSG00000102309.12 TPM= 1.81 Transcript Type= NA chrX 72272042 72277300 72272042 72277300 - ENST00000316084.9@RPS4X ENST00000316084.9 protein_coding 72277193,72276157,72275544,72275053,72273801,72273232,72272042 72277300,72276234,72275724,72275150,72273972,72273389,72272772 Gene ID= ENSG00000198034.10 TPM= 1329.34 Transcript Type= protein_coding chrX 72329516 72573103 72329516 72573103 - ENST00000373573.7@HDAC8 ENST00000373573.7 protein_coding 72572651,72572057,72568754,72567889,72495156,72490929,72488933,72464559,72462004,72351733,72329516 72573103,72572109,72568884,72568030,72495268,72491006,72489041,72464731,72462098,72351838,72330076 Gene ID= ENSG00000147099.19 TPM= 32.6 Transcript Type= protein_coding chrX 72329517 72572865 72329517 72572865 - transcript1221.chrX.nic@HDAC8 transcript1221.chrX.nic protein_coding 72572651,72572057,72568754,72567889,72495156,72488933,72464559,72462004,72351733,72329517 72572865,72572109,72568884,72568030,72495268,72489041,72464731,72462098,72351838,72330076 Gene ID= ENSG00000147099.19 TPM= 4.53 Transcript Type= NA chrX 72473416 72573048 72473416 72573048 - ENST00000439122.6@HDAC8 ENST00000439122.6 protein_coding 72572651,72572057,72568754,72567889,72495156,72490929,72488933,72473416 72573048,72572109,72568884,72568030,72495268,72491006,72489041,72474729 Gene ID= ENSG00000147099.19 TPM= 4.53 Transcript Type= protein_coding chrX 72567582 72572813 72567582 72572813 - ENST00000373556.7@HDAC8 ENST00000373556.7 protein_coding 72572651,72572057,72568754,72567889,72567582 72572813,72572109,72568884,72568030,72567796 Gene ID= ENSG00000147099.19 TPM= 1.81 Transcript Type= protein_coding chrX 72578815 72714305 72578815 72714305 - transcript1226.chrX.nnic@PHKA1 transcript1226.chrX.nnic protein_coding 72714051,72713803,72712779,72705198,72695708,72684498,72676070,72667375,72666151,72657588,72656120,72653435,72652544,72650390,72644362,72636277,72635155,72626971,72623109,72620725,72619214,72618710,72611028,72609624,72605541,72605271,72603119,72602158,72593104,72584249,72582398,72578815 72714305,72713941,72712937,72705245,72695876,72684580,72676150,72667473,72666297,72657641,72656242,72653530,72652651,72650468,72644496,72636386,72635299,72627049,72623275,72620901,72619305,72618849,72611184,72609703,72605619,72605400,72603220,72602273,72593274,72584302,72582598,72581175 Gene ID= ENSG00000067177.14 TPM= 27.62 Transcript Type= NA chrX 72578815 72714181 72578815 72714181 - ENST00000339490.7@PHKA1 ENST00000339490.7 protein_coding 72713803,72712779,72705198,72695708,72684498,72676070,72667375,72666151,72657588,72656120,72653435,72652544,72650390,72644362,72636277,72635155,72626971,72623109,72620725,72619214,72618710,72611028,72609624,72605541,72605271,72603119,72602158,72593104,72584249,72582398,72578815 72714181,72712937,72705245,72695876,72684580,72676150,72667473,72666297,72657641,72656242,72653530,72652651,72650468,72644496,72636386,72635299,72627049,72623275,72620901,72619305,72618849,72611184,72609703,72605619,72605400,72603220,72602273,72593274,72584302,72582598,72581175 Gene ID= ENSG00000067177.14 TPM= 28.52 Transcript Type= protein_coding chrX 73944319 74004550 73944319 74004550 + transcript1241.chrX.nnic@JPX transcript1241.chrX.nnic lincRNA 73944319,73944584,73946999,73994840,73998768,73998954,74004270 73944465,73944662,73947374,73994961,73998844,74000496,74004550 Gene ID= ENSG00000225470.7 TPM= 5.89 Transcript Type= NA chrX 73944319 74004551 73944319 74004551 + transcript1242.chrX.nnic@JPX transcript1242.chrX.nnic lincRNA 73944319,73944584,73962731,73994840,73998768,73998954,74004270 73944465,73944662,73962801,73994961,73998844,74000496,74004551 Gene ID= ENSG00000225470.7 TPM= 1.81 Transcript Type= NA chrX 73944319 74004544 73944319 74004544 + transcript1246.chrX.nic@JPX transcript1246.chrX.nic lincRNA 73944319,73944584,73994840,73998768,73998954,74004270 73944465,73944662,73994961,73998844,74000496,74004544 Gene ID= ENSG00000225470.7 TPM= 6.34 Transcript Type= NA chrX 73944319 74004677 73944319 74004677 + transcript1250.chrX.nic@JPX transcript1250.chrX.nic lincRNA 73944319,73944584,73998768,73998954,74004270 73944465,73944662,73998844,74000496,74004677 Gene ID= ENSG00000225470.7 TPM= 1.81 Transcript Type= NA chrX 73944319 74014384 73944319 74014384 + transcript1252.chrX.nnic@JPX transcript1252.chrX.nnic lincRNA 73944319,73944584,73994840,74014077 73944465,73944662,73994961,74014384 Gene ID= ENSG00000225470.7 TPM= 1.81 Transcript Type= NA chrX 73944319 73950739 73944319 73950739 + transcript1254.chrX.nic@JPX transcript1254.chrX.nic lincRNA 73944319,73944584,73946999 73944465,73944662,73950739 Gene ID= ENSG00000225470.7 TPM= 8.6 Transcript Type= NA chrX 73944324 74004551 73944324 74004551 + ENST00000602920.5@JPX ENST00000602920.5 lincRNA 73944324,73944584,73994840,74004270 73944465,73944662,73994961,74004551 Gene ID= ENSG00000225470.7 TPM= 2.72 Transcript Type= lincRNA chrX 73944346 73944946 73944346 73944946 + ENST00000453317.1@JPX ENST00000453317.1 lincRNA 73944346,73944584 73944465,73944946 Gene ID= ENSG00000225470.7 TPM= 1.81 Transcript Type= lincRNA chrX 74421461 74533917 74421461 74533917 + ENST00000587091.5@SLC16A2 ENST00000587091.5 protein_coding 74421461,74520990,74524359,74525750,74529213,74531333 74422067,74521134,74524809,74525893,74529441,74533917 Gene ID= ENSG00000147100.10 TPM= 45.28 Transcript Type= protein_coding chrX 74585217 74614617 74585217 74614617 - ENST00000332687.10@RLIM ENST00000332687.10 protein_coding 74614422,74595809,74594306,74585217 74614617,74596000,74594389,74593061 Gene ID= ENSG00000131263.12 TPM= 7.24 Transcript Type= protein_coding chrX 75053280 75156297 75053280 75156297 - ENST00000253577.7@ABCB7 ENST00000253577.7 protein_coding 75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053280 75156297,75114834,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585 Gene ID= ENSG00000131269.15 TPM= 15.39 Transcript Type= protein_coding chrX 75053284 75156280 75053284 75156280 - ENST00000373394.7@ABCB7 ENST00000373394.7 protein_coding 75156105,75114754,75112886,75098942,75076522,75075362,75073868,75073689,75071509,75070365,75069291,75069007,75065070,75062328,75060223,75053284 75156280,75114831,75112972,75099061,75076654,75075630,75073956,75073776,75071683,75070522,75069454,75069136,75065241,75062431,75060330,75053585 Gene ID= ENSG00000131269.15 TPM= 6.34 Transcript Type= protein_coding chrX 75274088 75304600 75274088 75304600 + ENST00000373383.8@UPRT ENST00000373383.8 protein_coding 75274088,75293472,75296342,75297491,75299735,75300867,75303405 75274640,75293514,75296411,75297553,75299896,75300965,75304600 Gene ID= ENSG00000094841.13 TPM= 7.24 Transcript Type= protein_coding chrX 75274090 75304600 75274090 75304600 + ENST00000373379.5@UPRT ENST00000373379.5 protein_coding 75274090,75293472,75296342,75297491,75299735,75300867,75303405 75274640,75293514,75296411,75297553,75299896,75301015,75304600 Gene ID= ENSG00000094841.13 TPM= 1.81 Transcript Type= protein_coding chrX 76173003 76178199 76173003 76178199 + transcript1279.chrX.nnic@PBDC1 transcript1279.chrX.nnic protein_coding 76173003,76173585,76174890,76175473,76176881,76177689 76173168,76173650,76174949,76175613,76176992,76178199 Gene ID= ENSG00000102390.10 TPM= 3.62 Transcript Type= NA chrX 77826367 77895454 77826367 77895454 - transcript1288.chrX.nnic@MAGT1 transcript1288.chrX.nnic protein_coding 77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828551,77826367 77895454,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828028 Gene ID= ENSG00000102158.19 TPM= 4.83 Transcript Type= NA chrX 77826367 77895454 77826367 77895454 - transcript1289.chrX.nnic@MAGT1 transcript1289.chrX.nnic protein_coding 77895309,77875428,77870808,77857357,77856733,77855501,77853901,77841246,77830805,77828611,77826367 77895454,77875597,77870925,77857497,77856873,77855590,77853964,77841320,77830895,77829235,77828034 Gene ID= ENSG00000102158.19 TPM= 4.53 Transcript Type= NA chrX 77899438 77907373 77899438 77907373 + ENST00000481445.1@COX7B ENST00000481445.1 protein_coding 77899438,77902643,77905184 77899593,77902767,77907373 Gene ID= ENSG00000131174.4 TPM= 114.1 Transcript Type= protein_coding chrX 79360384 79367359 79360384 79367359 - ENST00000373298.6@ITM2A ENST00000373298.6 protein_coding 79367105,79363423,79362942,79362581,79361329,79360384 79367359,79363554,79363139,79362691,79361479,79361177 Gene ID= ENSG00000078596.10 TPM= 18.56 Transcript Type= protein_coding chrX 79360388 79367552 79360388 79367552 - ENST00000434584.2@ITM2A ENST00000434584.2 protein_coding 79367105,79362942,79362581,79361329,79360388 79367552,79363139,79362691,79361479,79361177 Gene ID= ENSG00000078596.10 TPM= 2.26 Transcript Type= protein_coding chrX 81113897 81201931 81113897 81201931 - transcript1323.chrX.nic@HMGN5 transcript1323.chrX.nic protein_coding 81201737,81195118,81121535,81119788,81118730,81118432,81116204,81113897 81201931,81195297,81121672,81119817,81118759,81118485,81116341,81115230 Gene ID= ENSG00000198157.10 TPM= 19.02 Transcript Type= NA chrX 81201943 81298547 81201943 81298547 + ENST00000373212.5@SH3BGRL ENST00000373212.5 protein_coding 81201943,81276984,81278331,81297195 81202245,81277169,81278411,81298547 Gene ID= ENSG00000131171.12 TPM= 149.41 Transcript Type= protein_coding chrX 84321201 84502474 84321201 84502474 - transcript1337.chrX.nnic@HDX transcript1337.chrX.nnic protein_coding 84502342,84475251,84468472,84361466,84344250,84336801,84333759,84326178,84321201 84502474,84475397,84469575,84361612,84344457,84336880,84333842,84326300,84322014 Gene ID= ENSG00000165259.13 TPM= 3.62 Transcript Type= NA chrX 85243958 85273360 85243958 85273360 + transcript1346.chrX.nic@ZNF711 transcript1346.chrX.nic protein_coding 85243958,85245903,85247547,85255259,85264275,85265118,85267278,85268294,85270003,85270651 85244191,85246022,85247651,85255801,85264430,85265255,85267415,85268341,85270146,85273360 Gene ID= ENSG00000147180.16 TPM= 5.66 Transcript Type= NA chrX 85243839 85273360 85243839 85273360 + transcript1349.chrX.nnic@ZNF711 transcript1349.chrX.nnic protein_coding 85243839,85247547,85255259,85264275,85265118,85268294,85270003,85270651 85244191,85247651,85255801,85264430,85265255,85268341,85270146,85273360 Gene ID= ENSG00000147180.16 TPM= 8.38 Transcript Type= NA chrX 85243894 85273358 85243894 85273358 + transcript1350.chrX.nnic@ZNF711 transcript1350.chrX.nnic protein_coding 85243894,85247547,85255259,85264275,85265118,85268294,85270003 85244191,85247651,85255801,85264430,85265255,85268341,85273358 Gene ID= ENSG00000147180.16 TPM= 3.85 Transcript Type= NA chrX 85244032 85273360 85244032 85273360 + ENST00000373165.7@ZNF711 ENST00000373165.7 protein_coding 85244032,85245903,85247547,85255259,85264275,85265118,85268294,85270003,85270651 85244191,85246022,85247651,85255801,85264430,85265255,85268341,85270146,85273360 Gene ID= ENSG00000147180.16 TPM= 12.9 Transcript Type= protein_coding chrX 85861180 86047562 85861180 86047562 - ENST00000357749.6@CHM ENST00000357749.6 protein_coding 86047484,86027491,85981737,85978767,85963665,85958861,85957855,85956153,85911261,85901084,85900646,85894188,85878965,85873052,85861180 86047562,86027557,85981809,85978891,85964052,85958977,85957975,85956378,85911338,85901188,85900709,85894284,85879063,85873212,85864821 Gene ID= ENSG00000188419.13 TPM= 11.77 Transcript Type= protein_coding chrX 87517802 87670050 87517802 87670050 + transcript1353.chrX.nnic@KLHL4 transcript1353.chrX.nnic protein_coding 87517802,87613877,87614434,87617932,87622211,87625610,87632210,87633749,87635563,87664764,87666475,87669329 87518315,87614044,87614570,87618128,87622423,87625796,87632434,87633911,87635775,87664935,87666880,87670050 Gene ID= ENSG00000102271.13 TPM= 6.34 Transcript Type= NA chrX 87517749 87670050 87517749 87670050 + ENST00000373119.8@KLHL4 ENST00000373119.8 protein_coding 87517749,87613877,87614434,87617932,87622211,87625610,87632210,87633749,87635563,87664764,87666475 87518315,87614044,87614570,87618128,87622423,87625796,87632434,87633911,87635775,87664935,87670050 Gene ID= ENSG00000102271.13 TPM= 84.22 Transcript Type= protein_coding chrX 91434824 91438584 91434824 91438584 + ENST00000312600.3@PABPC5 ENST00000312600.3 protein_coding 91434824,91435435 91434894,91438584 Gene ID= ENSG00000174740.7 TPM= 7.24 Transcript Type= protein_coding chrX 96684837 97469839 96684837 97469839 + transcript1364.chrX.nic@DIAPH2 transcript1364.chrX.nic protein_coding 96684837,96735758,96738586,96758154,96763100,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694 96685190,96735790,96738762,96758258,96763120,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469839 Gene ID= ENSG00000147202.17 TPM= 3.17 Transcript Type= NA chrX 96684794 97469839 96684794 97469839 + transcript1365.chrX.nnic@DIAPH2 transcript1365.chrX.nnic protein_coding 96684794,96738586,96758154,96763100,96881579,96912328,96912483,96916438,96918509,96930733,96937233,96939266,96942018,96945527,96948935,96957828,96965093,97072941,97075167,97099694,97114726,97141665,97247715,97348116,97383909,97429650,97469694 96685190,96738762,96758258,96763120,96881718,96912402,96912552,96916574,96918617,96930843,96937351,96939382,96942136,96945591,96949039,96958148,96965207,97073042,97075261,97099795,97114965,97141794,97247839,97348280,97384044,97429745,97469839 Gene ID= ENSG00000147202.17 TPM= 7.7 Transcript Type= NA chrX 100674493 100732114 100674493 100732114 - transcript1371.chrX.nnic@SYTL4 transcript1371.chrX.nnic protein_coding 100732004,100704811,100703093,100701928,100701458,100701220,100700897,100691108,100690563,100690075,100689856,100688351,100687067,100686679,100685990,100681227,100679313,100678391,100674493 100732114,100704886,100703185,100702107,100701673,100701329,100700999,100691209,100690638,100690165,100689959,100688443,100687245,100686781,100686151,100681335,100679412,100678599,100676176 Gene ID= ENSG00000102362.15 TPM= 2.72 Transcript Type= NA chrX 100820401 100840918 100820401 100840918 + ENST00000372972.6@CSTF2 ENST00000372972.6 protein_coding 100820401,100821527,100822251,100823292,100823886,100824120,100826634,100828040,100831515,100832734,100833180,100837339,100838239,100840714 100820474,100821605,100822420,100823428,100824005,100824257,100826757,100828102,100831656,100832909,100833472,100837449,100838364,100840918 Gene ID= ENSG00000101811.13 TPM= 14.49 Transcript Type= protein_coding chrX 101009346 101052133 101009346 101052133 - transcript1388.chrX.nic@TRMT2B transcript1388.chrX.nic protein_coding 101051817,101051644,101051251,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346 101052133,101051733,101051366,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707 Gene ID= ENSG00000188917.14 TPM= 2.11 Transcript Type= NA chrX 101009346 101052120 101009346 101052120 - transcript1393.chrX.nnic@TRMT2B transcript1393.chrX.nnic protein_coding 101051784,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101013627,101009346 101052120,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101013739,101010707 Gene ID= ENSG00000188917.14 TPM= 4.53 Transcript Type= NA chrX 101009346 101052114 101009346 101052114 - transcript1394.chrX.nnic@TRMT2B transcript1394.chrX.nnic protein_coding 101051817,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101013627,101009346 101052114,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101013739,101010707 Gene ID= ENSG00000188917.14 TPM= 1.81 Transcript Type= NA chrX 101009346 101052116 101009346 101052116 - ENST00000545398.5@TRMT2B ENST00000545398.5 protein_coding 101051784,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346 101052116,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707 Gene ID= ENSG00000188917.14 TPM= 4.83 Transcript Type= protein_coding chrX 101009346 101052114 101009346 101052114 - transcript1401.chrX.nnic@TRMT2B transcript1401.chrX.nnic protein_coding 101051817,101042042,101041317,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346 101052114,101042312,101041371,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707 Gene ID= ENSG00000188917.14 TPM= 3.92 Transcript Type= NA chrX 101009346 101052120 101009346 101052120 - transcript1405.chrX.nic@TRMT2B transcript1405.chrX.nic protein_coding 101051784,101042042,101041317,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346 101052120,101042312,101041371,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707 Gene ID= ENSG00000188917.14 TPM= 2.72 Transcript Type= NA chrX 101009346 101052109 101009346 101052109 - transcript1409.chrX.nnic@TRMT2B transcript1409.chrX.nnic protein_coding 101051817,101037917,101036974,101035613,101023470,101021968,101021101,101020487,101019284,101018971,101009346 101052109,101038051,101037073,101035683,101023616,101022062,101021315,101020588,101019403,101019070,101010707 Gene ID= ENSG00000188917.14 TPM= 1.81 Transcript Type= NA chrX 101345661 101349196 101345661 101349196 - ENST00000372902.3@TIMM8A ENST00000372902.3 protein_coding 101348533,101345661 101349196,101346660 Gene ID= ENSG00000126953.5 TPM= 4.53 Transcript Type= protein_coding chrX 101349450 101386195 101349450 101386195 - ENST00000308731.7@BTK ENST00000308731.7 protein_coding 101386062,101375144,101374536,101371633,101369998,101362561,101362173,101360568,101360088,101359293,101358617,101358310,101357509,101356784,101356052,101354630,101353870,101353194,101349450 101386195,101375314,101374634,101371701,101370079,101362689,101362240,101360755,101360150,101359347,101358696,101358437,101357583,101356955,101356268,101354694,101353988,101353351,101349956 Gene ID= ENSG00000010671.15 TPM= 9.06 Transcript Type= protein_coding chrX 101390890 101396154 101390890 101396154 + ENST00000614077.4@RPL36A ENST00000614077.4 protein_coding 101390890,101391459,101391755,101395335,101395728 101391046,101391564,101391822,101395457,101396154 Gene ID= ENSG00000241343.9 TPM= 115 Transcript Type= protein_coding chrX 101390983 101395795 101390983 101395795 + ENST00000553110.7@RPL36A ENST00000553110.7 protein_coding 101390983,101391459,101391755,101395335,101395728 101391046,101391564,101391822,101395457,101395795 Gene ID= ENSG00000241343.9 TPM= 114.1 Transcript Type= protein_coding chrX 101397803 101407925 101397803 101407925 - ENST00000218516.3@GLA ENST00000218516.3 protein_coding 101407710,101403811,101401632,101400666,101398785,101398370,101397803 101407925,101403985,101401809,101400757,101398946,101398567,101398099 Gene ID= ENSG00000102393.9 TPM= 34.41 Transcript Type= protein_coding chrX 101408295 101414133 101408295 101414133 + ENST00000316594.5@HNRNPH2 ENST00000316594.5 protein_coding 101408295,101411936 101408319,101414133 Gene ID= ENSG00000126945.8 TPM= 27.17 Transcript Type= protein_coding chrX 101418259 101448313 101418259 101448313 + transcript1423.chrX.nic@ARMCX4 transcript1423.chrX.nic protein_coding 101418259,101418910,101444052,101445998,101447494 101418370,101419000,101444155,101446044,101448313 Gene ID= ENSG00000196440.11 TPM= 1.81 Transcript Type= NA chrX 101418299 101419183 101418299 101419183 + ENST00000453574.1@ARMCX4 ENST00000453574.1 protein_coding 101418299,101418910 101418370,101419183 Gene ID= ENSG00000196440.11 TPM= 2.72 Transcript Type= processed_transcript chrX 101550531 101554700 101550531 101554700 + ENST00000372829.7@ARMCX1 ENST00000372829.7 protein_coding 101550531,101550971,101551569,101552809 101550660,101551024,101551633,101554700 Gene ID= ENSG00000126947.12 TPM= 56.14 Transcript Type= protein_coding chrX 101615120 101618001 101615120 101618001 - ENST00000361910.8@ARMCX6 ENST00000361910.8 protein_coding 101617885,101617503,101615120 101618001,101617584,101616766 Gene ID= ENSG00000198960.10 TPM= 13.58 Transcript Type= protein_coding chrX 101622797 101627843 101622797 101627843 + ENST00000341189.8@ARMCX3 ENST00000341189.8 protein_coding 101622797,101623786,101624158,101624480,101624834 101623276,101623893,101624218,101624550,101627843 Gene ID= ENSG00000102401.19 TPM= 139 Transcript Type= protein_coding chrX 101623138 101627844 101623138 101627844 + transcript1448.chrX.nic@ARMCX3 transcript1448.chrX.nic protein_coding 101623138,101624158,101624480,101624834 101623893,101624218,101624550,101627844 Gene ID= ENSG00000102401.19 TPM= 12.22 Transcript Type= NA chrX 101623089 101626484 101623089 101626484 + ENST00000471229.6@ARMCX3 ENST00000471229.6 protein_coding 101623089,101623814,101624158,101624480,101624834 101623276,101623893,101624218,101624550,101626484 Gene ID= ENSG00000102401.19 TPM= 24.45 Transcript Type= protein_coding chrX 101655160 101659852 101655160 101659852 - transcript1453.chrX.nnic@ARMCX2 transcript1453.chrX.nnic protein_coding 101659758,101659431,101659076,101658461,101658073,101655160 101659852,101659501,101659148,101658525,101658142,101657715 Gene ID= ENSG00000184867.13 TPM= 4.26 Transcript Type= NA chrX 101655285 101659852 101655285 101659852 - transcript1456.chrX.nnic@ARMCX2 transcript1456.chrX.nnic protein_coding 101659758,101659431,101659076,101658461,101658073,101655285 101659852,101659501,101659148,101658569,101658142,101657715 Gene ID= ENSG00000184867.13 TPM= 2.44 Transcript Type= NA chrX 101655285 101659852 101655285 101659852 - transcript1459.chrX.nic@ARMCX2 transcript1459.chrX.nic protein_coding 101659758,101659419,101659076,101658492,101658073,101655285 101659852,101659501,101659148,101658569,101658142,101657715 Gene ID= ENSG00000184867.13 TPM= 6.07 Transcript Type= NA chrX 101655281 101658649 101655281 101658649 - ENST00000330154.6@ARMCX2 ENST00000330154.6 protein_coding 101658492,101658073,101655281 101658649,101658142,101657715 Gene ID= ENSG00000184867.13 TPM= 1.54 Transcript Type= protein_coding chrX 101655467 101659891 101655467 101659891 - ENST00000356824.8@ARMCX2 ENST00000356824.8 protein_coding 101659758,101659419,101659076,101658461,101658073,101655467 101659891,101659501,101659148,101658525,101658142,101657715 Gene ID= ENSG00000184867.13 TPM= 5.61 Transcript Type= protein_coding chrX 101882289 101932078 101882289 101932078 - transcript1468.chrX.nnic@ZMAT1 transcript1468.chrX.nnic protein_coding 101931717,101904224,101898119,101897868,101895814,101894454,101886632,101882289 101932078,101904330,101898220,101898042,101895882,101894904,101886731,101884821 Gene ID= ENSG00000166432.14 TPM= 2.72 Transcript Type= NA chrX 101882289 101932078 101882289 101932078 - transcript1469.chrX.nnic@ZMAT1 transcript1469.chrX.nnic protein_coding 101931717,101904224,101898119,101897868,101895814,101886632,101882289 101932078,101904330,101898220,101898042,101895882,101886731,101884821 Gene ID= ENSG00000166432.14 TPM= 1.81 Transcript Type= NA chrX 102125688 102127711 102125688 102127711 + ENST00000372780.5@TCEAL2 ENST00000372780.5 protein_coding 102125688,102126373,102126804 102125806,102126445,102127711 Gene ID= ENSG00000184905.8 TPM= 1.81 Transcript Type= protein_coding chrX 102140476 102142505 102140476 102142505 - ENST00000372774.7@TCEAL6 ENST00000372774.7 protein_coding 102142353,102141714,102140476 102142505,102141786,102141355 Gene ID= ENSG00000204071.10 TPM= 1.81 Transcript Type= protein_coding chrX 102153712 102156057 102153712 102156057 - ENST00000333643.3@BEX5 ENST00000333643.3 protein_coding 102155859,102154744,102153712 102156057,102154810,102154302 Gene ID= ENSG00000184515.10 TPM= 1.81 Transcript Type= protein_coding chrX 102599168 102604159 102599168 102604159 + ENST00000246174.6@ARMCX5 ENST00000246174.6 protein_coding 102599168,102599348,102599712,102600920,102601464,102601880 102599266,102599572,102599847,102601032,102601509,102604159 Gene ID= ENSG00000125962.14 TPM= 9.06 Transcript Type= protein_coding chrX 102599523 102717733 102599523 102717733 + transcript1485.chrX.nic@ARMCX5-GPRASP2 transcript1485.chrX.nic processed_transcript 102599523,102605482,102713782,102714189,102714537 102599847,102605653,102713849,102714266,102717733 Gene ID= ENSG00000271147.7 TPM= 2.17 Transcript Type= NA chrX 102712828 102717733 102712828 102717733 + transcript1498.chrX.nnic@ARMCX5-GPRASP2 transcript1498.chrX.nnic processed_transcript 102712828,102713130,102714189,102714537 102713006,102713217,102714266,102717733 Gene ID= ENSG00000271147.7 TPM= 2.17 Transcript Type= NA chrX 102712845 102717733 102712845 102717733 + transcript1499.chrX.nnic@ARMCX5-GPRASP2 transcript1499.chrX.nnic processed_transcript 102712845,102713782,102714189,102714537 102713006,102713849,102714266,102717733 Gene ID= ENSG00000271147.7 TPM= 27.53 Transcript Type= NA chrX 102651369 102659078 102651369 102659078 + transcript1483.chrX.nnic@GPRASP1 transcript1483.chrX.nnic protein_coding 102651369,102651687,102652175,102652831,102653221,102653580 102651595,102651908,102652265,102652898,102653298,102659078 Gene ID= ENSG00000198932.12 TPM= 7.85 Transcript Type= NA chrX 102651366 102659083 102651366 102659083 + ENST00000361600.9@GPRASP1 ENST00000361600.9 protein_coding 102651366,102652175,102652831,102653221,102653580 102651595,102652265,102652898,102653298,102659083 Gene ID= ENSG00000198932.12 TPM= 2.42 Transcript Type= protein_coding chrX 102651366 102659080 102651366 102659080 + ENST00000444152.5@GPRASP1 ENST00000444152.5 protein_coding 102651366,102653221,102653580 102651595,102653298,102659080 Gene ID= ENSG00000198932.12 TPM= 4.23 Transcript Type= protein_coding chrX 102712828 102717733 102712828 102717733 + transcript1493.chrX.nnic@GPRASP2 transcript1493.chrX.nnic protein_coding 102712828,102713130,102713782,102714189,102714537 102713006,102713217,102713849,102714266,102717733 Gene ID= ENSG00000158301.18 TPM= 20.28 Transcript Type= NA chrX 102712460 102717733 102712460 102717733 + transcript1497.chrX.nic@GPRASP2 transcript1497.chrX.nic protein_coding 102712460,102713782,102714189,102714537 102713217,102713849,102714266,102717733 Gene ID= ENSG00000158301.18 TPM= 13.04 Transcript Type= NA chrX 102720714 102752438 102720714 102752438 + ENST00000457056.5@BHLHB9 ENST00000457056.5 protein_coding 102720714,102720957,102747817,102748699 102720825,102721091,102747911,102752438 Gene ID= ENSG00000198908.11 TPM= 2.72 Transcript Type= protein_coding chrX 103062651 103064240 103062651 103064240 - ENST00000372728.3@BEX1 ENST00000372728.3 protein_coding 103064096,103063642,103062651 103064240,103063731,103063279 Gene ID= ENSG00000133169.5 TPM= 1.81 Transcript Type= protein_coding chrX 103215092 103217246 103215092 103217246 + ENST00000372695.5@BEX4 ENST00000372695.5 protein_coding 103215092,103215682,103216149 103215238,103215764,103217246 Gene ID= ENSG00000102409.9 TPM= 108.67 Transcript Type= protein_coding chrX 103252995 103255185 103252995 103255185 - ENST00000360000.8@TCEAL8 ENST00000360000.8 protein_coding 103255078,103252995 103255185,103254017 Gene ID= ENSG00000180964.16 TPM= 9.96 Transcript Type= protein_coding chrX 103252995 103255203 103252995 103255203 - ENST00000372685.7@TCEAL8 ENST00000372685.7 protein_coding 103255078,103254605,103252995 103255203,103254677,103254017 Gene ID= ENSG00000180964.16 TPM= 46.18 Transcript Type= protein_coding chrX 103309346 103311046 103309346 103311046 - ENST00000372677.7@BEX2 ENST00000372677.7 protein_coding 103310860,103310358,103309346 103311046,103310433,103309981 Gene ID= ENSG00000133134.11 TPM= 30.79 Transcript Type= protein_coding chrX 103309354 103310955 103309354 103310955 - ENST00000536889.1@BEX2 ENST00000536889.1 protein_coding 103310583,103310358,103309354 103310955,103310433,103309981 Gene ID= ENSG00000133134.11 TPM= 4.53 Transcript Type= protein_coding chrX 103356452 103358451 103356452 103358451 + ENST00000372661.4@TCEAL9 ENST00000372661.4 protein_coding 103356452,103357083,103357615 103356606,103357161,103358451 Gene ID= ENSG00000185222.8 TPM= 101.42 Transcript Type= protein_coding chrX 103356452 103358451 103356452 103358451 + ENST00000372656.4@TCEAL9 ENST00000372656.4 protein_coding 103356452,103357615 103356606,103358451 Gene ID= ENSG00000185222.8 TPM= 17.21 Transcript Type= protein_coding chrX 103376340 103378077 103376340 103378077 + ENST00000361298.8@BEX3 ENST00000361298.8 protein_coding 103376340,103377028,103377510 103376613,103377106,103378077 Gene ID= ENSG00000166681.13 TPM= 301.7 Transcript Type= protein_coding chrX 103376395 103378077 103376395 103378077 + ENST00000372645.3@BEX3 ENST00000372645.3 protein_coding 103376395,103377028,103377463 103376613,103377106,103378077 Gene ID= ENSG00000166681.13 TPM= 83.92 Transcript Type= protein_coding chrX 103376916 103378071 103376916 103378071 + ENST00000372634.1@BEX3 ENST00000372634.1 protein_coding 103376916,103377510 103377106,103378071 Gene ID= ENSG00000166681.13 TPM= 11.02 Transcript Type= protein_coding chrX 103585517 103587725 103585517 103587725 + ENST00000613326.4@TCEAL4 ENST00000613326.4 protein_coding 103585517,103586219,103586654,103586949 103585624,103586291,103586861,103587725 Gene ID= ENSG00000133142.17 TPM= 1.97 Transcript Type= protein_coding chrX 103585533 103587694 103585533 103587694 + ENST00000472745.1@TCEAL4 ENST00000472745.1 protein_coding 103585533,103585859,103586649 103585624,103586291,103587694 Gene ID= ENSG00000133142.17 TPM= 1.81 Transcript Type= protein_coding chrX 103585563 103587526 103585563 103587526 + ENST00000494801.5@TCEAL4 ENST00000494801.5 protein_coding 103585563,103586219,103586654 103585624,103586291,103587526 Gene ID= ENSG00000133142.17 TPM= 2.87 Transcript Type= protein_coding chrX 103607906 103609926 103607906 103609926 + ENST00000243286.7@TCEAL3 ENST00000243286.7 protein_coding 103607906,103608604,103609038 103608070,103608673,103609926 Gene ID= ENSG00000196507.10 TPM= 16.75 Transcript Type= protein_coding chrX 103607906 103609927 103607906 103609927 + ENST00000372627.9@TCEAL3 ENST00000372627.9 protein_coding 103607906,103608604,103609038 103608058,103608673,103609927 Gene ID= ENSG00000196507.10 TPM= 67.46 Transcript Type= protein_coding chrX 103628999 103630953 103628999 103630953 + ENST00000372624.3@TCEAL1 ENST00000372624.3 protein_coding 103628999,103629494,103629885 103629025,103629561,103630953 Gene ID= ENSG00000172465.13 TPM= 17.21 Transcript Type= protein_coding chrX 103628974 103630953 103628974 103630953 + ENST00000372625.7@TCEAL1 ENST00000372625.7 protein_coding 103628974,103629494,103629885 103629025,103629573,103630953 Gene ID= ENSG00000172465.13 TPM= 5.43 Transcript Type= protein_coding chrX 103675496 103686774 103675496 103686774 - transcript1543.chrX.nic@MORF4L2 transcript1543.chrX.nic protein_coding 103686631,103685171,103684681,103678499,103675496 103686774,103685260,103684729,103678600,103677051 Gene ID= ENSG00000123562.16 TPM= 12.8 Transcript Type= NA chrX 103675500 103686818 103675500 103686818 - ENST00000422154.6@MORF4L2 ENST00000422154.6 protein_coding 103686631,103685171,103678499,103675500 103686818,103685260,103678651,103677051 Gene ID= ENSG00000123562.16 TPM= 40.42 Transcript Type= protein_coding chrX 103675500 103688158 103675500 103688158 - ENST00000433176.6@MORF4L2 ENST00000433176.6 protein_coding 103687989,103685171,103678499,103675500 103688158,103685260,103678651,103677051 Gene ID= ENSG00000123562.16 TPM= 16.88 Transcript Type= protein_coding chrX 103675500 103686818 103675500 103686818 - ENST00000451301.5@MORF4L2 ENST00000451301.5 protein_coding 103686631,103685171,103675500 103686818,103685260,103677051 Gene ID= ENSG00000123562.16 TPM= 2.84 Transcript Type= protein_coding chrX 103675496 103688064 103675496 103688064 - ENST00000360458.5@MORF4L2 ENST00000360458.5 protein_coding 103687989,103685171,103678499,103675496 103688064,103685260,103678600,103677051 Gene ID= ENSG00000123562.16 TPM= 87.06 Transcript Type= protein_coding chrX 103776850 103792619 103776850 103792619 + ENST00000619236.1@PLP1 ENST00000619236.1 protein_coding 103776850,103785582,103786465,103787798,103788437,103789333,103790527 103776999,103785768,103786621,103787966,103788510,103789398,103792619 Gene ID= ENSG00000123560.13 TPM= 2.72 Transcript Type= protein_coding chrX 104157058 104191444 104157058 104191444 + transcript1560.chrX.nnic@FAM199X transcript1560.chrX.nnic protein_coding 104157058,104175623,104186066,104186460,104188040,104189608 104157150,104175842,104186215,104186621,104188306,104191444 Gene ID= ENSG00000123575.8 TPM= 3.62 Transcript Type= NA chrX 106168305 106208956 106168305 106208956 + transcript1565.chrX.nnic@MUM1L1 transcript1565.chrX.nnic protein_coding 106168305,106171012,106203985,106205219 106168366,106171139,106204170,106208956 Gene ID= ENSG00000157502.13 TPM= 2.26 Transcript Type= NA chrX 106168305 106208956 106168305 106208956 + ENST00000357175.6@MUM1L1 ENST00000357175.6 protein_coding 106168305,106171012,106203985,106205219 106168425,106171139,106204170,106208956 Gene ID= ENSG00000157502.13 TPM= 2.26 Transcript Type= protein_coding chrX 106726664 106796993 106726664 106796993 + ENST00000255499.2@RNF128 ENST00000255499.2 protein_coding 106726664,106772913,106785065,106787918,106790186,106791066,106795580 106727397,106773160,106785136,106788000,106790282,106791234,106796993 Gene ID= ENSG00000133135.13 TPM= 189.26 Transcript Type= protein_coding chrX 106802677 106876160 106802677 106876160 + transcript1575.chrX.nnic@TBC1D8B transcript1575.chrX.nnic protein_coding 106802677,106818663,106820877,106821977,106823226,106826030,106827170,106840048,106840670,106848186,106850025,106853521,106854198,106865559,106865793,106866797,106868393,106869485,106870716,106873570 106802983,106818773,106820995,106822202,106823466,106826237,106827337,106840198,106840884,106848303,106850310,106853650,106854296,106865627,106866033,106866862,106868476,106869541,106870813,106876160 Gene ID= ENSG00000133138.19 TPM= 2.72 Transcript Type= NA chrX 106802752 106849831 106802752 106849831 + transcript1581.chrX.nic@TBC1D8B transcript1581.chrX.nic protein_coding 106802752,106818663,106820877,106821977,106823226,106826030,106827170,106839308,106840048,106840670,106848186 106802983,106818773,106820995,106822202,106823466,106826237,106827337,106839457,106840198,106840884,106849831 Gene ID= ENSG00000133138.19 TPM= 3.92 Transcript Type= NA chrX 106860242 106876160 106860242 106876160 + transcript1583.chrX.nnic@TBC1D8B transcript1583.chrX.nnic protein_coding 106860242,106862603,106865559,106865793,106866797,106868393,106869485,106870716,106873570 106860319,106862656,106865627,106866033,106866862,106868476,106869541,106870813,106876160 Gene ID= ENSG00000133138.19 TPM= 1.81 Transcript Type= NA chrX 106802680 106876145 106802680 106876145 + ENST00000357242.9@TBC1D8B ENST00000357242.9 protein_coding 106802680,106818663,106820877,106821977,106823226,106826030,106827170,106839308,106840048,106840670,106848186,106850025,106853521,106854198,106865559,106865793,106866797,106868393,106869485,106870716,106873570 106802983,106818773,106820995,106822202,106823466,106826237,106827337,106839457,106840198,106840884,106848303,106850310,106853650,106854296,106865627,106866033,106866862,106868476,106869541,106870813,106876145 Gene ID= ENSG00000133138.19 TPM= 46.48 Transcript Type= protein_coding chrX 106802689 106849831 106802689 106849831 + ENST00000310452.6@TBC1D8B ENST00000310452.6 protein_coding 106802689,106818663,106820877,106821977,106823226,106826030,106827170,106839308,106840048,106840670,106848186,106849245 106802983,106818773,106820995,106822202,106823466,106826237,106827337,106839457,106840198,106840884,106848303,106849831 Gene ID= ENSG00000133138.19 TPM= 12.07 Transcript Type= protein_coding chrX 106900164 106930859 106900164 106930859 + ENST00000541806.5@CLDN2 ENST00000541806.5 protein_coding 106900164,106928051 106900504,106930859 Gene ID= ENSG00000165376.10 TPM= 11.77 Transcript Type= protein_coding chrX 106940745 107000225 106940745 107000225 - transcript1589.chrX.nnic@MORC4 transcript1589.chrX.nnic protein_coding 106999868,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941976,106940745 107000225,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632 Gene ID= ENSG00000133131.14 TPM= 10.41 Transcript Type= NA chrX 106940736 107000225 106940736 107000225 - transcript1590.chrX.nnic@MORC4 transcript1590.chrX.nnic protein_coding 106999868,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940736 107000225,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632 Gene ID= ENSG00000133131.14 TPM= 5.43 Transcript Type= NA chrX 106940736 107000214 106940736 107000214 - transcript1593.chrX.nnic@MORC4 transcript1593.chrX.nnic protein_coding 106999868,106999677,106993230,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940736 107000214,106999749,106993362,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632 Gene ID= ENSG00000133131.14 TPM= 9.06 Transcript Type= NA chrX 106940734 107000244 106940734 107000244 - ENST00000355610.8@MORC4 ENST00000355610.8 protein_coding 106999868,106999677,106993230,106985983,106985096,106981345,106980891,106978080,106976584,106962012,106958336,106956936,106956480,106954913,106942515,106941938,106940734 107000244,106999749,106993362,106986200,106985243,106981477,106981019,106978199,106976684,106962110,106958464,106957004,106956534,106955088,106943205,106942221,106941632 Gene ID= ENSG00000133131.14 TPM= 58.86 Transcript Type= protein_coding chrX 107122749 107206484 107122749 107206484 - transcript1600.chrX.nic@NUP62CL transcript1600.chrX.nic protein_coding 107206273,107175089,107167649,107154096,107153454,107153172,107147743,107122749 107206484,107175193,107167784,107154246,107153503,107153306,107147809,107124332 Gene ID= ENSG00000198088.10 TPM= 6.34 Transcript Type= NA chrX 107628507 107651026 107628507 107651026 + ENST00000372435.8@PRPS1 ENST00000372435.8 protein_coding 107628507,107639295,107640902,107642366,107645177,107647606,107649940 107628750,107639478,107641000,107642490,107645350,107647765,107651026 Gene ID= ENSG00000147224.10 TPM= 6.34 Transcript Type= protein_coding chrX 107713221 107716545 107713221 107716545 - ENST00000372390.8@TSC22D3 ENST00000372390.8 protein_coding 107716315,107715899,107713221 107716545,107715950,107714749 Gene ID= ENSG00000157514.16 TPM= 15.16 Transcript Type= protein_coding chrX 107713221 107717135 107713221 107717135 - ENST00000372397.6@TSC22D3 ENST00000372397.6 protein_coding 107716690,107715899,107713221 107717135,107715950,107714749 Gene ID= ENSG00000157514.16 TPM= 507.78 Transcript Type= protein_coding chrX 107713224 107775787 107713224 107775787 - ENST00000372383.8@TSC22D3 ENST00000372383.8 protein_coding 107775100,107715899,107713224 107775787,107715950,107714749 Gene ID= ENSG00000157514.16 TPM= 117.26 Transcript Type= protein_coding chrX 107713221 107775985 107713221 107775985 - ENST00000315660.8@TSC22D3 ENST00000315660.8 protein_coding 107775780,107775100,107715899,107713221 107775985,107775525,107715950,107714749 Gene ID= ENSG00000157514.16 TPM= 13.12 Transcript Type= protein_coding chrX 107713224 107775988 107713224 107775988 - ENST00000372384.6@TSC22D3 ENST00000372384.6 protein_coding 107775780,107775100,107715899,107713224 107775988,107775511,107715950,107714749 Gene ID= ENSG00000157514.16 TPM= 12.22 Transcript Type= protein_coding chrX 107825736 107931635 107825736 107931635 + transcript1625.chrX.nic@MID2 transcript1625.chrX.nic protein_coding 107825736,107840670,107854609,107903958,107905478,107916002,107917506,107924343,107926094,107926671 107825800,107841385,107854704,107904065,107905626,107916129,107917649,107924504,107926301,107931635 Gene ID= ENSG00000080561.13 TPM= 5.43 Transcript Type= NA chrX 108084207 108091618 108084207 108091618 - ENST00000217958.7@PSMD10 ENST00000217958.7 protein_coding 108091407,108088752,108087953,108087686,108084207 108091618,108088850,108088099,108087852,108085127 Gene ID= ENSG00000101843.18 TPM= 29.88 Transcript Type= protein_coding chrX 108091798 108154670 108091798 108154670 + transcript1634.chrX.nic@ATG4A transcript1634.chrX.nic protein_coding 108091798,108126077,108128781,108131260,108134057,108134339,108137091,108137804,108138113,108150152,108151802,108152979,108153642 108091879,108126187,108128852,108131358,108134158,108134411,108137170,108137991,108138191,108150297,108151858,108153087,108154670 Gene ID= ENSG00000101844.17 TPM= 10.41 Transcript Type= NA chrX 108091784 108154671 108091784 108154671 + ENST00000372246.7@ATG4A ENST00000372246.7 protein_coding 108091784,108126077,108126793,108128781,108131260,108134057,108134339,108137091,108137804,108138113,108150152,108151802,108152979,108153642 108091836,108126187,108127094,108128852,108131358,108134158,108134411,108137170,108137991,108138191,108150297,108151858,108153087,108154671 Gene ID= ENSG00000101844.17 TPM= 1.36 Transcript Type= nonsense_mediated_decay chrX 109536876 109544690 109536876 109544690 + ENST00000372106.5@NXT2 ENST00000372106.5 protein_coding 109536876,109538045,109541475,109542507 109537021,109538131,109541619,109544690 Gene ID= ENSG00000101888.11 TPM= 9.06 Transcript Type= protein_coding chrX 109628864 109733257 109628864 109733257 - transcript1643.chrX.nnic@ACSL4 transcript1643.chrX.nnic protein_coding 109733139,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109628864 109733257,109696196,109683375,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109629579 Gene ID= ENSG00000068366.19 TPM= 3.8 Transcript Type= NA chrX 109641332 109733612 109641332 109733612 - transcript1647.chrX.nnic@ACSL4 transcript1647.chrX.nnic protein_coding 109733139,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641332 109733612,109683375,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186 Gene ID= ENSG00000068366.19 TPM= 25.31 Transcript Type= NA chrX 109641332 109733266 109641332 109733266 - transcript1649.chrX.nic@ACSL4 transcript1649.chrX.nic protein_coding 109733139,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641332 109733266,109683666,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186 Gene ID= ENSG00000068366.19 TPM= 10.82 Transcript Type= NA chrX 109641337 109733302 109641337 109733302 - ENST00000469796.6@ACSL4 ENST00000469796.6 protein_coding 109733139,109696144,109683136,109682719,109681266,109680998,109678265,109677988,109674402,109669034,109668101,109665420,109663211,109661531,109659354,109641337 109733302,109696196,109683666,109682896,109681375,109681136,109678415,109678111,109674473,109669173,109668273,109665494,109663402,109661645,109659511,109644186 Gene ID= ENSG00000068366.19 TPM= 6.29 Transcript Type= protein_coding chrX 110194186 110318239 110194186 110318239 - ENST00000262844.9@AMMECR1 ENST00000262844.9 protein_coding 110317599,110264489,110216518,110202446,110200954,110194186 110318239,110264599,110216632,110202536,110201050,110198634 Gene ID= ENSG00000101935.9 TPM= 4.53 Transcript Type= protein_coding chrX 111681118 111690172 111681118 111690172 + ENST00000371979.7@ALG13 ENST00000371979.7 protein_coding 111681118,111682132,111684965,111687887 111681299,111682294,111685103,111690172 Gene ID= ENSG00000101901.11 TPM= 16.3 Transcript Type= protein_coding chrX 111681192 111688825 111681192 111688825 + transcript1661.chrX.nic@ALG13 transcript1661.chrX.nic protein_coding 111681192,111682236,111684965,111687887 111681299,111682294,111685103,111688825 Gene ID= ENSG00000101901.11 TPM= 1.81 Transcript Type= NA chrX 113970777 113977699 113970777 113977699 - transcript1662.chrX.nnic@RN7SL93P transcript1662.chrX.nnic misc_RNA 113976991,113975656,113970777 113977699,113975797,113970834 Gene ID= ENSG00000240327.3 TPM= 1.81 Transcript Type= NA chrX 115561182 115650861 115561182 115650861 + ENST00000355899.7@PLS3 ENST00000355899.7 protein_coding 115561182,115610243,115622246,115629198,115629835,115634000,115634881,115636836,115640408,115643313,115645021,115646072,115646402,115647550,115647893,115649429 115561260,115610323,115622409,115629327,115629967,115634081,115635046,115636978,115640503,115643508,115645099,115646186,115646535,115647673,115648017,115650861 Gene ID= ENSG00000102024.17 TPM= 158.77 Transcript Type= protein_coding chrX 117897814 118116865 117897814 118116865 - ENST00000540167.5@KLHL13 ENST00000540167.5 protein_coding 118116508,118028424,117945434,117920238,117919521,117909301,117901833,117897814 118116865,118028497,117945575,117920370,117919717,117910096,117901946,117899395 Gene ID= ENSG00000003096.14 TPM= 1.36 Transcript Type= protein_coding chrX 117897814 118116865 117897814 118116865 - ENST00000545703.5@KLHL13 ENST00000545703.5 protein_coding 118116508,117945434,117920238,117919521,117909301,117901833,117897814 118116865,117945575,117920370,117919717,117910096,117901946,117899395 Gene ID= ENSG00000003096.14 TPM= 14.04 Transcript Type= protein_coding chrX 118346109 118449961 118346109 118449961 + ENST00000254029.7@WDR44 ENST00000254029.7 protein_coding 118346109,118378419,118387340,118392632,118394055,118395249,118396970,118398387,118404338,118406875,118409489,118410895,118432781,118436702,118441368,118442244,118442565,118443560,118444360,118448893 118346580,118378452,118387414,118393271,118394185,118395344,118397106,118398470,118404444,118407026,118409627,118410959,118432894,118436824,118441559,118442345,118442680,118443687,118444494,118449961 Gene ID= ENSG00000131725.13 TPM= 17.21 Transcript Type= protein_coding chrX 118727526 118805224 118727526 118805224 + transcript1684.chrX.nnic@IL13RA1 transcript1684.chrX.nnic protein_coding 118727526,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118804932 118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118805224 Gene ID= ENSG00000131724.10 TPM= 3.62 Transcript Type= NA chrX 118727589 118794536 118727589 118794536 + transcript1687.chrX.nnic@IL13RA1 transcript1687.chrX.nnic protein_coding 118727589,118741017,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762 118727726,118741156,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794536 Gene ID= ENSG00000131724.10 TPM= 5.43 Transcript Type= NA chrX 118727572 118794539 118727572 118794539 + ENST00000371666.7@IL13RA1 ENST00000371666.7 protein_coding 118727572,118741017,118746954,118749658,118758055,118761138,118766530,118766844,118773879,118776427,118791762 118727726,118741156,118747092,118749778,118758242,118761289,118766577,118766976,118773975,118776511,118794539 Gene ID= ENSG00000131724.10 TPM= 113.19 Transcript Type= protein_coding chrX 118823790 118826968 118823790 118826968 + ENST00000310164.2@ZCCHC12 ENST00000310164.2 protein_coding 118823790,118824339,118824589,118825131 118824005,118824390,118824713,118826968 Gene ID= ENSG00000174460.3 TPM= 4.53 Transcript Type= protein_coding chrX 119236253 119244466 119236253 119244466 + ENST00000217971.7@PGRMC1 ENST00000217971.7 protein_coding 119236253,119240309,119243151 119236691,119240464,119244466 Gene ID= ENSG00000101856.9 TPM= 529.74 Transcript Type= protein_coding chrX 119399060 119454478 119399060 119454478 + ENST00000217909.7@SLC25A43 ENST00000217909.7 protein_coding 119399060,119406460,119410190,119452009,119452865 119399678,119406701,119410362,119452143,119454478 Gene ID= ENSG00000077713.18 TPM= 9.96 Transcript Type= protein_coding chrX 119466034 119468262 119466034 119468262 - ENST00000446986.1@SLC25A5-AS1 ENST00000446986.1 processed_transcript 119468106,119466034 119468262,119467750 Gene ID= ENSG00000224281.4 TPM= 1.81 Transcript Type= lincRNA chrX 119468400 119471319 119468400 119471319 + ENST00000317881.8@SLC25A5 ENST00000317881.8 protein_coding 119468400,119469661,119470373,119470901 119468626,119470147,119470513,119471319 Gene ID= ENSG00000005022.5 TPM= 220.05 Transcript Type= protein_coding chrX 119616941 119694122 119616941 119694122 - transcript1724.chrX.nnic@SEPT6 transcript1724.chrX.nnic protein_coding 119694035,119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119616941 119694122,119693178,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119618786 Gene ID= ENSG00000125354.22 TPM= 150.77 Transcript Type= NA chrX 119616944 119693421 119616944 119693421 - transcript1727.chrX.nic@SEPT6 transcript1727.chrX.nic protein_coding 119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119625335,119616944 119693421,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119625379,119618786 Gene ID= ENSG00000125354.22 TPM= 19.92 Transcript Type= NA chrX 119616948 119693370 119616948 119693370 - ENST00000394610.5@SEPT6 ENST00000394610.5 protein_coding 119693076,119675554,119663482,119652854,119649937,119640692,119637027,119633360,119629318,119625335,119616948 119693370,119675668,119663677,119653040,119650098,119640788,119637195,119633492,119629508,119625379,119620051 Gene ID= ENSG00000125354.22 TPM= 59.31 Transcript Type= protein_coding chrX 119786506 119791643 119786506 119791643 - ENST00000361575.3@RPL39 ENST00000361575.3 protein_coding 119791574,119789908,119786506 119791643,119790011,119786732 Gene ID= ENSG00000198918.7 TPM= 470.88 Transcript Type= protein_coding chrX 119834026 119852998 119834026 119852998 - ENST00000345865.6@UPF3B ENST00000345865.6 protein_coding 119852773,119851767,119851495,119845198,119843191,119841735,119841076,119838367,119837757,119834026 119852998,119851873,119851601,119845296,119843301,119841778,119841258,119838527,119838051,119835027 Gene ID= ENSG00000125351.11 TPM= 7.24 Transcript Type= protein_coding chrX 119871487 119876662 119871487 119876662 + ENST00000371437.4@NDUFA1 ENST00000371437.4 protein_coding 119871487,119873304,119876514 119872013,119873393,119876662 Gene ID= ENSG00000125356.6 TPM= 200.13 Transcript Type= protein_coding chrX 120236458 120245233 120236458 120245233 - ENST00000452254.2@NKAPP1 ENST00000452254.2 transcribed_processed_pseudogene 120244764,120240227,120236458 120245233,120240355,120238242 Gene ID= ENSG00000233382.6 TPM= 3.62 Transcript Type= processed_transcript chrX 120250752 120258398 120250752 120258398 + ENST00000326624.2@ZBTB33 ENST00000326624.2 protein_coding 120250752,120253414 120250977,120258398 Gene ID= ENSG00000177485.6 TPM= 8.15 Transcript Type= protein_coding chrX 120258650 120311536 120258650 120311536 - ENST00000371369.8@TMEM255A ENST00000371369.8 protein_coding 120311252,120304349,120293989,120291251,120287154,120285127,120276885,120268244,120258650 120311536,120304491,120294051,120291340,120287222,120285215,120277047,120268387,120261028 Gene ID= ENSG00000125355.15 TPM= 1.81 Transcript Type= protein_coding chrX 120430826 120469306 120430826 120469306 - ENST00000200639.8@LAMP2 ENST00000200639.8 protein_coding 120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120430826 120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120431462 Gene ID= ENSG00000005893.15 TPM= 241.78 Transcript Type= protein_coding chrX 120436494 120469306 120436494 120469306 - ENST00000371335.4@LAMP2 ENST00000371335.4 protein_coding 120469106,120456651,120455357,120448970,120447841,120446305,120442599,120441730,120436494 120469306,120456769,120455570,120449128,120448025,120446427,120442662,120441894,120439293 Gene ID= ENSG00000005893.15 TPM= 114.1 Transcript Type= protein_coding chrX 120524609 120560700 120524609 120560700 - ENST00000371322.9@CUL4B ENST00000371322.9 protein_coding 120560083,120557924,120547136,120546547,120545444,120544481,120544114,120543727,120542966,120541602,120540370,120539268,120538660,120538124,120536927,120535830,120534481,120532422,120530102,120524609 120560700,120558039,120547239,120546616,120545517,120544643,120544203,120543809,120543033,120541720,120540562,120539372,120538770,120538209,120537034,120535943,120534586,120532594,120530254,120526856 Gene ID= ENSG00000158290.16 TPM= 7.24 Transcript Type= protein_coding chrX 123184226 123421298 123184226 123421298 + transcript1783.chrX.nic@GRIA3 transcript1783.chrX.nic protein_coding 123184226,123185832,123253303,123326026,123354910,123394968,123398636,123402994,123403412,123404708,123417402 123184644,123185990,123253542,123326213,123354963,123395129,123398803,123403098,123403519,123404914,123421298 Gene ID= ENSG00000125675.17 TPM= 3.62 Transcript Type= NA chrX 123184153 123204683 123184153 123204683 + ENST00000616590.4@GRIA3 ENST00000616590.4 protein_coding 123184153,123184518,123185832,123202636,123204400 123184219,123184644,123185990,123202782,123204683 Gene ID= ENSG00000125675.17 TPM= 2.72 Transcript Type= protein_coding chrX 123601880 123733084 123601880 123733084 - transcript1790.chrX.nic@THOC2 transcript1790.chrX.nic protein_coding 123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621157,123620907,123619401,123614052,123613639,123613399,123611440,123610918,123601880 123733084,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587,123620965,123619436,123614189,123613708,123613556,123611516,123610963,123603748 Gene ID= ENSG00000125676.19 TPM= 9.51 Transcript Type= NA chrX 123600562 123733054 123600562 123733054 - ENST00000245838.12@THOC2 ENST00000245838.12 protein_coding 123732952,123712850,123706858,123703454,123697681,123696721,123696021,123686548,123671669,123668159,123667106,123665642,123645334,123644779,123644575,123640538,123638934,123638043,123636079,123633953,123632861,123631688,123627693,123626521,123625912,123624541,123624060,123623787,123623105,123622758,123621157,123620907,123619401,123614052,123613639,123613399,123611440,123610918,123600562 123733054,123712908,123706949,123703505,123697751,123696842,123696154,123686714,123671761,123668314,123667278,123665837,123645375,123644909,123644676,123640622,123639027,123638123,123636175,123634070,123633040,123631852,123627968,123626662,123626069,123624669,123624191,123623971,123623283,123622860,123621587,123620965,123619436,123614189,123613708,123613556,123611516,123610963,123601338 Gene ID= ENSG00000125676.19 TPM= 10.41 Transcript Type= protein_coding chrX 123961706 124102653 123961706 124102653 + transcript1799.chrX.nic@STAG2 transcript1799.chrX.nic protein_coding 123961706,124022531,124025840,124030961,124037527,124042569,124045164,124047354,124049005,124050186,124051121,124051315,124056128,124057866,124061224,124061771,124062902,124063116,124063848,124065876,124066175,124066356,124068564,124071149,124076332,124077957,124081380,124083421,124086547,124090575,124090854,124094018,124095372,124100574 123961856,124022671,124025918,124031125,124037623,124042645,124045368,124047505,124049078,124050309,124051219,124051394,124056235,124057977,124061341,124061874,124062994,124063205,124064051,124065946,124066262,124066436,124068656,124071323,124076471,124078058,124081528,124083549,124086770,124090764,124090964,124094144,124095449,124102653 Gene ID= ENSG00000101972.18 TPM= 3.62 Transcript Type= NA chrX 129446402 129523582 129446402 129523582 - transcript1808.chrX.nnic@SMARCA1 transcript1808.chrX.nnic protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446402 129523582,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301 Gene ID= ENSG00000102038.15 TPM= 74.93 Transcript Type= NA chrX 129446503 129523497 129446503 129523497 - transcript1811.chrX.nnic@SMARCA1 transcript1811.chrX.nnic protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448302,129446503 129523497,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233 Gene ID= ENSG00000102038.15 TPM= 19.24 Transcript Type= NA chrX 129446502 129523523 129446502 129523523 - transcript1814.chrX.nnic@SMARCA1 transcript1814.chrX.nnic protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446502 129523523,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301 Gene ID= ENSG00000102038.15 TPM= 42.11 Transcript Type= NA chrX 129446503 129523515 129446503 129523515 - transcript1817.chrX.nnic@SMARCA1 transcript1817.chrX.nnic protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448302,129446503 129523515,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233 Gene ID= ENSG00000102038.15 TPM= 12.68 Transcript Type= NA chrX 129446506 129523485 129446506 129523485 - ENST00000371123.5@SMARCA1 ENST00000371123.5 protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446506 129523485,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233 Gene ID= ENSG00000102038.15 TPM= 105.04 Transcript Type= protein_coding chrX 129446505 129523500 129446505 129523500 - ENST00000371122.8@SMARCA1 ENST00000371122.8 protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448302,129446505 129523500,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447301 Gene ID= ENSG00000102038.15 TPM= 9.28 Transcript Type= protein_coding chrX 129446846 129523405 129446846 129523405 - ENST00000371121.4@SMARCA1 ENST00000371121.4 protein_coding 129523197,129518361,129516331,129515894,129515687,129511804,129507941,129506080,129504734,129499732,129497845,129496750,129493040,129491941,129490060,129488937,129487018,129481075,129480701,129471204,129468773,129465844,129465520,129448333,129446846 129523405,129518447,129516497,129515994,129515787,129511983,129508096,129506211,129504802,129499841,129498071,129496871,129493075,129492093,129490192,129489085,129487137,129481185,129480814,129471326,129468905,129465962,129465732,129448443,129447233 Gene ID= ENSG00000102038.15 TPM= 1.13 Transcript Type= protein_coding chrX 129540275 129592561 129540275 129592561 + ENST00000357121.5@OCRL ENST00000357121.5 protein_coding 129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129587002,129588179,129588886,129589845,129590146 129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129587118,129588263,129589013,129589956,129592561 Gene ID= ENSG00000122126.15 TPM= 15.85 Transcript Type= protein_coding chrX 129540275 129592561 129540275 129592561 + ENST00000371113.8@OCRL ENST00000371113.8 protein_coding 129540275,129540744,129544958,129548563,129557325,129557861,129558633,129558840,129560550,129561179,129562384,129562599,129565772,129567254,129569264,129575140,129575897,129576317,129584344,129587002,129588179,129588886,129589845,129590146 129540478,129540823,129545037,129548601,129557435,129557950,129558753,129559001,129560651,129561293,129562500,129562786,129565883,129567363,129569399,129575250,129576062,129576552,129584367,129587118,129588263,129589013,129589956,129592561 Gene ID= ENSG00000122126.15 TPM= 2.26 Transcript Type= protein_coding chrX 129779984 129795201 129779984 129795201 + ENST00000356892.3@SASH3 ENST00000356892.3 protein_coding 129779984,129787975,129788431,129790940,129792328,129792627,129792989,129793642 129780154,129788070,129788577,129791081,129792476,129792836,129793139,129795201 Gene ID= ENSG00000122122.9 TPM= 9.96 Transcript Type= protein_coding chrX 129803288 129843884 129803288 129843884 - ENST00000357166.10@ZDHHC9 ENST00000357166.10 protein_coding 129843696,129843259,129841779,129828981,129823679,129814658,129813677,129812718,129811406,129810905,129803288 129843884,129843326,129842080,129829141,129823837,129814795,129813725,129812820,129811509,129811001,129806486 Gene ID= ENSG00000188706.12 TPM= 24.45 Transcript Type= protein_coding chrX 129906116 129929751 129906116 129929751 + transcript1841.chrX.nnic@UTP14A transcript1841.chrX.nnic protein_coding 129906116,129907367,129908060,129908670,129911008,129911766,129919175,129919395,129920457,129920675,129921194,129924795,129925919,129926240,129929336 129906236,129907442,129908130,129908734,129911150,129911921,129919294,129919489,129920580,129920942,129921587,129925195,129926112,129926339,129929751 Gene ID= ENSG00000156697.12 TPM= 1.81 Transcript Type= NA chrX 129906183 129929752 129906183 129929752 + ENST00000394422.7@UTP14A ENST00000394422.7 protein_coding 129906183,129907367,129908060,129908670,129911008,129911766,129919175,129919395,129920457,129920675,129921194,129924795,129925919,129926240,129929336 129906236,129907442,129908130,129908734,129911150,129911921,129919294,129919489,129920580,129920752,129921587,129925195,129926112,129926339,129929752 Gene ID= ENSG00000156697.12 TPM= 16.3 Transcript Type= protein_coding chrX 130064928 130110495 130064928 130110495 - ENST00000308167.9@ELF4 ENST00000308167.9 protein_coding 130110325,130081256,130074581,130074049,130072226,130071336,130071040,130069300,130064928 130110495,130081539,130074752,130074141,130072417,130071419,130071232,130069677,130067525 Gene ID= ENSG00000102034.16 TPM= 3.62 Transcript Type= protein_coding chrX 130129370 130165887 130129370 130165887 - ENST00000287295.7@AIFM1 ENST00000287295.7 protein_coding 130165551,130156461,130149469,130147752,130147493,130145479,130140533,130139795,130138593,130137078,130136643,130136045,130133313,130131675,130129970,130129370 130165887,130156603,130149568,130147876,130147623,130145569,130140617,130139871,130138701,130137185,130136731,130136185,130133455,130131799,130130166,130129628 Gene ID= ENSG00000156709.13 TPM= 207.37 Transcript Type= protein_coding chrX 130339906 130373359 130339906 130373359 + transcript1853.chrX.nic@SLC25A14 transcript1853.chrX.nic protein_coding 130339906,130345182,130346544,130349251,130349824,130350646,130358640,130364628,130365541,130371564,130372909 130339976,130345275,130346691,130349345,130349867,130350731,130358735,130364752,130365676,130371644,130373359 Gene ID= ENSG00000102078.15 TPM= 2.72 Transcript Type= NA chrX 130339906 130373359 130339906 130373359 + transcript1855.chrX.nic@SLC25A14 transcript1855.chrX.nic protein_coding 130339906,130345182,130346544,130349251,130358640,130364628,130365541,130371564,130372909 130339976,130345275,130346691,130349345,130358735,130364752,130365676,130371644,130373359 Gene ID= ENSG00000102078.15 TPM= 4.53 Transcript Type= NA chrX 130401969 130413343 130401969 130413343 + ENST00000305536.10@RBMX2 ENST00000305536.10 protein_coding 130401969,130402255,130403802,130409257,130411348,130412361 130402037,130402370,130403853,130409386,130411525,130413343 Gene ID= ENSG00000134597.15 TPM= 14.49 Transcript Type= protein_coding chrX 130623385 130903317 130623385 130903317 - ENST00000394363.5@ENOX2 ENST00000394363.5 protein_coding 130903049,130901684,130783547,130703120,130688863,130679542,130669965,130667530,130665643,130656581,130637229,130634984,130631468,130627958,130623385 130903317,130901731,130783690,130703254,130689018,130679748,130670198,130667742,130665749,130656695,130637410,130635091,130631576,130628043,130625445 Gene ID= ENSG00000165675.16 TPM= 14.49 Transcript Type= protein_coding chrX 132203025 132218124 132203025 132218124 - ENST00000342983.6@RAP2C ENST00000342983.6 protein_coding 132217916,132216996,132214134,132203025 132218124,132217806,132214446,132205587 Gene ID= ENSG00000123728.9 TPM= 10.41 Transcript Type= protein_coding chrX 132203026 132219446 132203026 132219446 - transcript1867.chrX.nic@RAP2C transcript1867.chrX.nic protein_coding 132219370,132216996,132214134,132203026 132219446,132217806,132214446,132205587 Gene ID= ENSG00000123728.9 TPM= 6.79 Transcript Type= NA chrX 132376746 132490172 132376746 132490172 - transcript1870.chrX.nic@MBNL3 transcript1870.chrX.nic protein_coding 132489814,132406228,132392143,132390847,132386661,132384663,132382178,132381359,132376746 132490172,132406392,132392334,132391083,132386811,132384698,132382272,132381432,132379677 Gene ID= ENSG00000076770.14 TPM= 2.72 Transcript Type= NA chrX 133535745 133985895 133535745 133985895 - ENST00000370818.7@GPC3 ENST00000370818.7 protein_coding 133985275,133953050,133753482,133699895,133692369,133661730,133596440,133535745 133985895,133953211,133754176,133700028,133692494,133661850,133596599,133536293 Gene ID= ENSG00000147257.13 TPM= 47.99 Transcript Type= protein_coding chrX 134373312 134428789 134373312 134428789 + ENST00000332070.7@PHF6 ENST00000332070.7 protein_coding 134373312,134377572,134378005,134393501,134393909,134413491,134413823,134415016,134417169,134425201 134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134428789 Gene ID= ENSG00000156531.16 TPM= 15.39 Transcript Type= protein_coding chrX 134373312 134428791 134373312 134428791 + ENST00000625464.2@PHF6 ENST00000625464.2 protein_coding 134373312,134377572,134378005,134393501,134393909,134413488,134413823,134415016,134417169,134425201,134425661 134373467,134377755,134378106,134393634,134393952,134413657,134413966,134415120,134417302,134425330,134428791 Gene ID= ENSG00000156531.16 TPM= 5.43 Transcript Type= protein_coding chrX 134460153 134500668 134460153 134500668 + ENST00000298556.7@HPRT1 ENST00000298556.7 protein_coding 134460153,134473359,134475181,134486465,134490188,134493508,134498390,134498608,134500030 134460338,134473465,134475364,134486530,134490205,134493590,134498436,134498684,134500668 Gene ID= ENSG00000165704.14 TPM= 55.24 Transcript Type= protein_coding chrX 134769566 134797134 134769566 134797134 - ENST00000370790.5@FAM122B ENST00000370790.5 protein_coding 134796108,134793815,134789223,134789085,134788730,134787472,134785886,134781821,134769566 134797134,134793893,134789266,134789139,134788831,134787533,134785947,134781917,134772283 Gene ID= ENSG00000156504.16 TPM= 9.06 Transcript Type= protein_coding chrX 134887627 134915255 134887627 134915255 - transcript1900.chrX.nnic@MOSPD1 transcript1900.chrX.nnic protein_coding 134915182,134904737,134899280,134899090,134896817,134891479,134887627 134915255,134904858,134899534,134899165,134897034,134891640,134889192 Gene ID= ENSG00000101928.12 TPM= 2.72 Transcript Type= NA chrX 134887626 134915267 134887626 134915267 - ENST00000370783.7@MOSPD1 ENST00000370783.7 protein_coding 134915182,134899280,134899090,134896817,134891479,134887626 134915267,134899534,134899165,134897034,134891640,134889192 Gene ID= ENSG00000101928.12 TPM= 16.3 Transcript Type= protein_coding chrX 135285787 135344122 135285787 135344122 - transcript1918.chrX.nnic@ZNF75D transcript1918.chrX.nnic protein_coding 135343261,135341768,135295768,135293730,135292281,135291472,135291009,135285787 135344122,135341954,135296039,135294258,135292473,135291563,135291135,135287846 Gene ID= ENSG00000186376.14 TPM= 4.07 Transcript Type= NA chrX 135285788 135344087 135285788 135344087 - ENST00000370766.7@ZNF75D ENST00000370766.7 protein_coding 135341768,135295768,135293730,135292281,135291472,135291009,135285788 135344087,135296039,135294258,135292473,135291563,135291135,135287846 Gene ID= ENSG00000186376.14 TPM= 4.07 Transcript Type= protein_coding chrX 135344787 135363145 135344787 135363145 + transcript1925.chrX.nic@ZNF449 transcript1925.chrX.nic protein_coding 135344787,135347019,135359892,135360193 135344835,135349314,135360005,135363145 Gene ID= ENSG00000173275.12 TPM= 2.72 Transcript Type= NA chrX 135344796 135363152 135344796 135363152 + ENST00000339249.4@ZNF449 ENST00000339249.4 protein_coding 135344796,135347019,135349110,135359892,135360193 135344835,135347472,135349314,135360005,135363152 Gene ID= ENSG00000173275.12 TPM= 8.15 Transcript Type= protein_coding chrX 135421943 135428074 135421943 135428074 + ENST00000417443.2@SMIM10L2A ENST00000417443.2 protein_coding 135421943,135423633 135422730,135428074 Gene ID= ENSG00000178947.8 TPM= 277.1 Transcript Type= protein_coding chrX 135520628 135582536 135520628 135582536 + transcript1930.chrX.nic@INTS6L transcript1930.chrX.nic protein_coding 135520628,135521241,135545423,135546380,135546702,135547137,135549642,135551994,135556168,135569337,135570436,135572815,135573939,135575084,135577193,135579788,135581050,135581528 135521103,135521318,135545572,135546469,135546885,135547265,135549805,135552146,135556300,135569431,135570546,135573033,135574062,135575226,135577295,135580162,135581143,135582536 Gene ID= ENSG00000165359.15 TPM= 3.62 Transcript Type= NA chrX 135520628 135582536 135520628 135582536 + transcript1934.chrX.nic@INTS6L transcript1934.chrX.nic protein_coding 135520628,135521241,135545423,135546380,135546702,135547137,135549642,135551994,135556168,135569337,135572815,135573939,135575084,135577193,135579788,135581050,135581528 135521103,135521318,135545572,135546469,135546885,135547265,135549805,135552146,135556300,135569431,135573033,135574062,135575226,135577295,135580162,135581143,135582536 Gene ID= ENSG00000165359.15 TPM= 4.53 Transcript Type= NA chrX 135520643 135582493 135520643 135582493 + ENST00000639893.1@INTS6L ENST00000639893.1 protein_coding 135520643,135521241,135545423,135546380,135546702,135547137,135549642,135551994,135556168,135569337,135570436,135572815,135573939,135575084,135577193,135579788,135581050,135581528 135521103,135521318,135545572,135546469,135546885,135547265,135549805,135552146,135556300,135569431,135570546,135573033,135574062,135575226,135577427,135580162,135581143,135582493 Gene ID= ENSG00000165359.15 TPM= 4.53 Transcript Type= protein_coding chrX 135962070 135974063 135962070 135974063 - ENST00000305963.2@MMGT1 ENST00000305963.2 protein_coding 135973597,135971058,135967390,135962070 135974063,135971110,135967493,135965183 Gene ID= ENSG00000169446.5 TPM= 13.58 Transcript Type= protein_coding chrX 135985436 136047129 135985436 136047129 + transcript1950.chrX.nic@SLC9A6 transcript1950.chrX.nic protein_coding 135985436,135985603,135994786,135998108,135998482,135998856,136002108,136010442,136012949,136013349,136016645,136022586,136024330,136030132,136033414,136040076,136044452 135985472,135985827,135994985,135998185,135998558,135998968,136002213,136010583,136013054,136013437,136016758,136022697,136024483,136030162,136033493,136040181,136047129 Gene ID= ENSG00000198689.10 TPM= 7.24 Transcript Type= NA chrX 136147465 136211359 136147465 136211359 + ENST00000370690.7@FHL1 ENST00000370690.7 protein_coding 136147465,136169907,136206407,136207016,136207792,136208455,136209871 136147628,136169980,136206588,136207190,136207961,136208641,136211359 Gene ID= ENSG00000022267.16 TPM= 39.55 Transcript Type= protein_coding chrX 136147757 136211353 136147757 136211353 + transcript1956.chrX.nic@FHL1 transcript1956.chrX.nic protein_coding 136147757,136169907,136206407,136207016,136207792,136208455,136209871 136147878,136169980,136206588,136207190,136207961,136208641,136211353 Gene ID= ENSG00000022267.16 TPM= 3.32 Transcript Type= NA chrX 136169637 136211359 136169637 136211359 + ENST00000394153.6@FHL1 ENST00000394153.6 protein_coding 136169637,136169907,136206407,136207016,136207792,136208455,136209871 136169733,136169980,136206588,136207190,136207961,136208641,136211359 Gene ID= ENSG00000022267.16 TPM= 4.23 Transcript Type= protein_coding chrX 136147536 136211354 136147536 136211354 + ENST00000618438.4@FHL1 ENST00000618438.4 protein_coding 136147536,136169907,136206407,136207016,136207792,136209871 136147628,136169980,136206588,136207190,136207961,136211354 Gene ID= ENSG00000022267.16 TPM= 1.81 Transcript Type= protein_coding chrX 136216811 136251579 136216811 136251579 - ENST00000316077.13@MAP7D3 ENST00000316077.13 protein_coding 136251289,136246243,136246065,136244632,136241160,136240382,136236244,136231544,136230839,136230385,136228623,136227284,136225909,136224827,136222393,136220765,136219593,136219398,136216811 136251579,136246341,136246148,136244795,136241277,136240486,136236339,136232220,136230966,136230593,136228758,136227431,136226013,136224880,136222486,136220963,136219671,136219495,136218493 Gene ID= ENSG00000129680.15 TPM= 17.21 Transcript Type= protein_coding chrX 136496935 136512343 136496935 136512343 + transcript1966.chrX.nic@HTATSF1 transcript1966.chrX.nic protein_coding 136496935,136497676,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808 136497439,136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512343 Gene ID= ENSG00000102241.11 TPM= 21.73 Transcript Type= NA chrX 136497511 136512346 136497511 136512346 + ENST00000218364.4@HTATSF1 ENST00000218364.4 protein_coding 136497511,136499598,136500158,136500664,136502778,136504364,136509091,136510082,136510808 136497870,136499778,136500205,136500818,136502941,136504463,136509180,136510219,136512346 Gene ID= ENSG00000102241.11 TPM= 50.71 Transcript Type= protein_coding chrX 136665547 136782088 136665547 136782088 - ENST00000250617.6@ARHGEF6 ENST00000250617.6 protein_coding 136780718,136779414,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547 136782088,136779497,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169 Gene ID= ENSG00000129675.15 TPM= 4.07 Transcript Type= protein_coding chrX 136665547 136767343 136665547 136767343 - ENST00000370620.5@ARHGEF6 ENST00000370620.5 protein_coding 136767144,136747508,136745223,136743585,136732102,136713276,136708675,136706908,136690610,136687932,136685677,136682758,136681890,136680731,136679535,136677936,136676624,136675007,136672020,136669482,136665547 136767343,136747592,136745347,136743786,136732172,136713370,136708770,136707030,136690748,136687991,136685823,136682844,136681968,136680876,136679660,136677956,136676717,136675096,136672119,136669536,136668169 Gene ID= ENSG00000129675.15 TPM= 6.79 Transcript Type= protein_coding chrX 136869194 136880780 136869194 136880780 - transcript1980.chrX.nic@RBMX transcript1980.chrX.nic protein_coding 136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873246,136872268,136869194 136880780,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452,136872345,136870417 Gene ID= ENSG00000147274.14 TPM= 19.02 Transcript Type= NA chrX 136869194 136880726 136869194 136880726 - transcript1982.chrX.nic@RBMX transcript1982.chrX.nic protein_coding 136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136872268,136869194 136880726,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136872345,136870417 Gene ID= ENSG00000147274.14 TPM= 19.62 Transcript Type= NA chrX 136869194 136880725 136869194 136880725 - transcript1984.chrX.nic@RBMX transcript1984.chrX.nic protein_coding 136880597,136879319,136879017,136877915,136876503,136875471,136875258,136872268,136869194 136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136870417 Gene ID= ENSG00000147274.14 TPM= 8.15 Transcript Type= NA chrX 136873461 136880725 136873461 136880725 - ENST00000320676.11@RBMX ENST00000320676.11 protein_coding 136880597,136879319,136879017,136877915,136876503,136875471,136875258,136875086,136873461 136880725,136879453,136879123,136878086,136876655,136875585,136875383,136875168,136874452 Gene ID= ENSG00000147274.14 TPM= 130.1 Transcript Type= protein_coding chrX 139581769 139708313 139581769 139708313 - transcript1986.chrX.nnic@MCF2 transcript1986.chrX.nnic protein_coding 139708106,139691915,139651720,139646789,139645568,139632335,139631395,139629695,139626623,139626193,139619587,139617513,139616282,139614881,139613216,139610301,139607691,139605713,139604869,139604681,139602406,139598406,139597460,139596549,139589835,139588360,139587716,139586378,139585066,139581769 139708313,139692005,139651788,139646903,139645658,139632454,139631511,139629844,139626756,139626307,139619706,139617704,139616473,139615052,139613263,139610338,139607779,139605779,139604984,139604750,139602498,139598498,139597585,139596770,139589927,139588438,139587788,139586487,139585178,139582503 Gene ID= ENSG00000101977.19 TPM= 3.62 Transcript Type= NA chrX 139581769 139692402 139581769 139692402 - transcript1987.chrX.nic@MCF2 transcript1987.chrX.nic protein_coding 139691915,139651720,139646789,139645568,139632335,139631395,139629695,139626623,139626193,139619587,139617513,139616282,139614881,139613216,139610301,139607691,139605713,139604869,139604681,139602406,139598406,139597460,139596549,139589835,139588360,139587716,139586378,139585066,139581769 139692402,139651788,139646903,139645658,139632454,139631511,139629844,139626756,139626307,139619706,139617704,139616473,139615052,139613263,139610338,139607779,139605779,139604984,139604750,139602498,139598498,139597585,139596770,139589927,139588438,139587788,139586487,139585178,139582503 Gene ID= ENSG00000101977.19 TPM= 2.72 Transcript Type= NA chrX 139581769 139708192 139581769 139708192 - transcript1991.chrX.nnic@MCF2 transcript1991.chrX.nnic protein_coding 139708106,139646789,139645568,139632335,139631395,139629695,139626623,139626193,139619587,139617513,139616282,139614881,139613216,139610301,139607691,139605713,139604869,139604681,139602406,139598406,139597460,139596549,139589835,139588360,139587716,139586378,139585066,139581769 139708192,139646903,139645658,139632454,139631511,139629844,139626756,139626307,139619706,139617704,139616473,139615052,139613263,139610338,139607779,139605779,139604984,139604750,139602498,139598498,139597585,139596770,139589927,139588438,139587788,139586487,139585178,139582503 Gene ID= ENSG00000101977.19 TPM= 1.81 Transcript Type= NA chrX 139581771 139708167 139581771 139708167 - transcript1992.chrX.nnic@MCF2 transcript1992.chrX.nnic protein_coding 139708106,139651720,139646789,139645568,139632335,139631395,139629695,139626623,139626193,139619587,139617513,139616282,139614881,139613216,139610301,139607691,139605713,139604869,139604681,139602406,139598406,139597460,139596549,139589835,139588360,139587716,139586378,139581771 139708167,139651788,139646903,139645658,139632454,139631511,139629844,139626756,139626307,139619706,139617704,139616473,139615052,139613263,139610338,139607779,139605779,139604984,139604750,139602498,139598498,139597585,139596770,139589927,139588438,139587788,139586487,139582503 Gene ID= ENSG00000101977.19 TPM= 1.81 Transcript Type= NA chrX 147911881 147951112 147911881 147951112 + transcript2006.chrX.nic@FMR1 transcript2006.chrX.nic protein_coding 147911881,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944869,147945534,147948734 147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951112 Gene ID= ENSG00000102081.13 TPM= 11.23 Transcript Type= NA chrX 147911881 147951112 147911881 147951112 + transcript2011.chrX.nic@FMR1 transcript2011.chrX.nic protein_coding 147911881,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944944,147945534,147948734 147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951112 Gene ID= ENSG00000102081.13 TPM= 3.98 Transcript Type= NA chrX 147911951 147951112 147911951 147951112 + ENST00000218200.12@FMR1 ENST00000218200.12 protein_coding 147911951,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944869,147945534,147948683 147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951112 Gene ID= ENSG00000102081.13 TPM= 3.98 Transcript Type= protein_coding chrX 147911951 147951125 147911951 147951125 + ENST00000440235.6@FMR1 ENST00000440235.6 protein_coding 147911951,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936504,147937466,147940576,147943131,147944944,147945534,147948683 147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147951125 Gene ID= ENSG00000102081.13 TPM= 2.17 Transcript Type= protein_coding chrX 147912052 147950636 147912052 147950636 + ENST00000439526.6@FMR1 ENST00000439526.6 protein_coding 147912052,147921933,147925540,147928322,147928659,147929948,147930128,147932425,147932685,147936510,147937466,147940576,147943131,147944869,147945534,147948734 147912230,147921985,147925633,147928393,147928807,147930041,147930244,147932595,147932763,147936613,147937600,147940662,147943326,147945051,147945616,147950636 Gene ID= ENSG00000102081.13 TPM= 1.27 Transcript Type= protein_coding chrX 149476990 149505347 149476990 149505347 - ENST00000340855.10@IDS ENST00000340855.10 protein_coding 149505035,149504157,149503312,149500949,149498107,149496346,149490314,149486925,149476990 149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487098,149483218 Gene ID= ENSG00000010404.17 TPM= 29.43 Transcript Type= protein_coding chrX 149487131 149505347 149487131 149505347 - ENST00000370441.8@IDS ENST00000370441.8 protein_coding 149505035,149504157,149503312,149500949,149498107,149496346,149490314,149487131 149505347,149504293,149503489,149501037,149498307,149496516,149490440,149487313 Gene ID= ENSG00000010404.17 TPM= 4.98 Transcript Type= protein_coding chrX 149528077 149540958 149528077 149540958 - transcript2032.chrX.nnic@LINC00893 transcript2032.chrX.nnic antisense_RNA 149540695,149538115,149537633,149535700,149532882,149529513,149529367,149528077 149540958,149538172,149537778,149536255,149534888,149529593,149529428,149528358 Gene ID= ENSG00000241769.7 TPM= 1.81 Transcript Type= NA chrX 149540975 149547309 149540975 149547309 + ENST00000423421.5@CXorf40A ENST00000423421.5 protein_coding 149540975,149542019,149545368,149545602,149546739 149541343,149542066,149545500,149545883,149547309 Gene ID= ENSG00000197620.10 TPM= 11.77 Transcript Type= protein_coding chrX 149596556 149631912 149596556 149631912 - ENST00000600449.7@TMEM185A ENST00000600449.7 protein_coding 149631543,149611287,149608627,149603987,149600303,149599554,149596556 149631912,149611463,149608834,149604070,149600479,149599677,149598255 Gene ID= ENSG00000269556.7 TPM= 33.58 Transcript Type= protein_coding chrX 149596550 149771273 149596550 149771273 - transcript2045.chrX.nnic@TMEM185A transcript2045.chrX.nnic protein_coding 149771124,149769699,149769037,149600303,149599554,149596550 149771273,149769822,149769073,149600368,149599677,149598255 Gene ID= ENSG00000269556.7 TPM= 2.49 Transcript Type= NA chrX 149596550 149631827 149596550 149631827 - transcript2048.chrX.nic@TMEM185A transcript2048.chrX.nic protein_coding 149631543,149611287,149603987,149600303,149599554,149596550 149631827,149611463,149604070,149600479,149599677,149598255 Gene ID= ENSG00000269556.7 TPM= 2.79 Transcript Type= NA chrX 149596556 149631719 149596556 149631719 - ENST00000612022.1@TMEM185A ENST00000612022.1 protein_coding 149631543,149600303,149599554,149596556 149631719,149600479,149599677,149598255 Gene ID= ENSG00000269556.7 TPM= 1.88 Transcript Type= nonsense_mediated_decay chrX 149603709 149631698 149603709 149631698 - ENST00000507237.5@TMEM185A ENST00000507237.5 protein_coding 149631543,149611287,149608627,149603709 149631698,149611463,149608834,149604070 Gene ID= ENSG00000269556.7 TPM= 1.81 Transcript Type= protein_coding chrX 149932196 149938482 149932196 149938482 - transcript2060.chrX.nnic@CXorf40B transcript2060.chrX.nnic protein_coding 149937633,149937433,149934005,149933622,149932196 149938482,149937480,149934137,149933903,149932767 Gene ID= ENSG00000197021.8 TPM= 1.81 Transcript Type= NA chrX 149929527 149938435 149929527 149938435 - ENST00000462691.5@CXorf40B ENST00000462691.5 protein_coding 149938193,149937433,149934005,149933622,149932589,149929527 149938435,149937480,149934137,149933903,149932767,149930081 Gene ID= ENSG00000197021.8 TPM= 3.62 Transcript Type= protein_coding chrX 149932197 149938811 149932197 149938811 - ENST00000370406.7@CXorf40B ENST00000370406.7 protein_coding 149938193,149937433,149934005,149933622,149932197 149938811,149937480,149934137,149933903,149932767 Gene ID= ENSG00000197021.8 TPM= 10.87 Transcript Type= protein_coding chrX 150568619 150673322 150568619 150673322 + ENST00000370396.6@MTM1 ENST00000370396.6 protein_coding 150568619,150592605,150596498,150598592,150614589,150619038,150638943,150641269,150645683,150649716,150657821,150659664,150660371,150663433,150671428 150568662,150592677,150596570,150598686,150614699,150619139,150639026,150641418,150645871,150649901,150658027,150659756,150660484,150663609,150673322 Gene ID= ENSG00000171100.14 TPM= 35.32 Transcript Type= protein_coding chrX 150693410 150765102 150693410 150765102 + ENST00000445323.6@MTMR1 ENST00000445323.6 protein_coding 150693410,150699195,150712342,150718625,150727215,150727684,150730109,150730525,150731470,150732542,150736595,150737242,150744361,150750730,150755689,150762565 150693676,150699300,150712365,150718700,150727309,150727791,150730210,150730608,150731619,150732730,150736780,150737448,150744453,150750843,150755865,150765102 Gene ID= ENSG00000063601.16 TPM= 16.3 Transcript Type= protein_coding chrX 150766337 150898685 150766337 150898685 - transcript2072.chrX.nnic@CD99L2 transcript2072.chrX.nnic protein_coding 150898522,150831231,150828306,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150770304,150766337 150898685,150831293,150828368,150816078,150814936,150795486,150795289,150793756,150777482,150776293,150770369,150769101 Gene ID= ENSG00000102181.20 TPM= 13.58 Transcript Type= NA chrX 150766337 150898706 150766337 150898706 - ENST00000370377.7@CD99L2 ENST00000370377.7 protein_coding 150898522,150831231,150816007,150814862,150795418,150795206,150793691,150777444,150776174,150770304,150766337 150898706,150831293,150816078,150814936,150795486,150795289,150793756,150777482,150776293,150770369,150769101 Gene ID= ENSG00000102181.20 TPM= 192.88 Transcript Type= protein_coding chrX 150983286 150990775 150983286 150990775 + ENST00000325307.11@HMGB3 ENST00000325307.11 protein_coding 150983286,150985595,150986051,150987128,150987777 150983376,150985749,150986190,150987302,150990775 Gene ID= ENSG00000029993.14 TPM= 19.92 Transcript Type= protein_coding chrX 151397204 151409364 151397204 151409364 + ENST00000330374.6@VMA21 ENST00000330374.6 protein_coding 151397204,151403631,151404916 151397361,151403740,151409364 Gene ID= ENSG00000160131.13 TPM= 27.17 Transcript Type= protein_coding chrX 152826973 152830777 152826973 152830777 - ENST00000370277.3@CETN2 ENST00000370277.3 protein_coding 152830708,152829602,152829149,152828537,152826973 152830777,152829760,152829277,152828674,152827930 Gene ID= ENSG00000147400.8 TPM= 24.45 Transcript Type= protein_coding chrX 152830967 152869729 152830967 152869729 + ENST00000370274.7@NSDHL ENST00000370274.7 protein_coding 152830967,152846282,152850265,152858770,152862596,152865819,152867571,152868784 152831117,152846432,152850423,152858916,152862724,152865961,152867673,152869729 Gene ID= ENSG00000147383.10 TPM= 39.84 Transcript Type= protein_coding chrX 153334153 153352925 153334153 153352925 + transcript2098.chrX.nic@ZNF275 transcript2098.chrX.nic protein_coding 153334153,153336634,153345520,153346819 153334285,153336710,153345621,153352925 Gene ID= ENSG00000063587.13 TPM= 72.44 Transcript Type= NA chrX 153447666 153470590 153447666 153470590 - transcript2101.chrX.nic@HAUS7 transcript2101.chrX.nic protein_coding 153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454877,153454394,153447666 153470590,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153455053,153454508,153447909 Gene ID= ENSG00000213397.10 TPM= 4.53 Transcript Type= NA chrX 153447666 153470631 153447666 153470631 - ENST00000370211.8@HAUS7 ENST00000370211.8 protein_coding 153470450,153469146,153464988,153462610,153457137,153456493,153456265,153455542,153454394,153447666 153470631,153469261,153465055,153462671,153457228,153456651,153456364,153455766,153454508,153447909 Gene ID= ENSG00000213397.10 TPM= 22.64 Transcript Type= protein_coding chrX 153494939 153509554 153494939 153509554 + ENST00000331595.8@BGN ENST00000331595.8 protein_coding 153494939,153504621,153505238,153505863,153506529,153506830,153507047,153508248 153495113,153504869,153505350,153506076,153506639,153506923,153507185,153509554 Gene ID= ENSG00000182492.15 TPM= 496.08 Transcript Type= protein_coding chrX 153517620 153581079 153517620 153581079 + transcript2116.chrX.nic@ATP2B3 transcript2116.chrX.nic protein_coding 153517620,153536122,153541359,153541669,153542323,153543043,153546088,153547835,153548640,153549497,153550045,153553035,153556049,153556331,153556917,153558112,153559729,153560676,153562135,153564921,153569603,153579978 153517875,153536455,153541556,153541926,153542448,153543168,153546129,153547999,153548854,153549739,153550286,153553269,153556228,153556418,153557023,153558303,153559942,153560887,153562242,153565103,153569689,153581079 Gene ID= ENSG00000067842.17 TPM= 1.81 Transcript Type= NA chrX 153517639 153569969 153517639 153569969 + transcript2118.chrX.nnic@ATP2B3 transcript2118.chrX.nnic protein_coding 153517639,153518432,153536122,153541359,153541669,153542323,153543043,153546088,153547835,153548640,153549497,153550045,153553035,153556049,153556331,153556917,153558112,153559729,153560676,153562135,153564921,153569603 153517875,153518551,153536455,153541556,153541926,153542448,153543168,153546129,153547999,153548854,153549739,153550286,153553269,153556228,153556418,153557023,153558303,153559942,153560887,153562242,153565103,153569969 Gene ID= ENSG00000067842.17 TPM= 10.19 Transcript Type= NA chrX 153517620 153569969 153517620 153569969 + transcript2119.chrX.nic@ATP2B3 transcript2119.chrX.nic protein_coding 153517620,153536122,153541359,153541669,153542323,153543043,153546088,153547835,153548640,153549497,153550045,153553035,153556049,153556331,153556917,153558112,153559729,153560676,153562135,153564921,153569603 153517875,153536455,153541556,153541926,153542448,153543168,153546129,153547999,153548854,153549739,153550286,153553269,153556228,153556418,153557023,153558303,153559942,153560887,153562242,153565103,153569969 Gene ID= ENSG00000067842.17 TPM= 14.72 Transcript Type= NA chrX 153535045 153569969 153535045 153569969 + transcript2122.chrX.nnic@ATP2B3 transcript2122.chrX.nnic protein_coding 153535045,153536122,153541359,153541669,153542323,153543043,153546088,153547835,153548640,153549497,153550045,153553035,153556049,153556331,153556917,153558112,153559729,153560676,153562135,153564921,153569603 153535186,153536455,153541556,153541926,153542448,153543168,153546129,153547999,153548854,153549739,153550286,153553269,153556228,153556418,153557023,153558303,153559942,153560887,153562242,153565103,153569969 Gene ID= ENSG00000067842.17 TPM= 7.47 Transcript Type= NA chrX 153538126 153569969 153538126 153569969 + transcript2125.chrX.nnic@ATP2B3 transcript2125.chrX.nnic protein_coding 153538126,153541359,153541669,153542323,153543043,153546088,153547835,153548640,153549497,153550045,153553035,153556049,153556331,153556917,153558112,153559729,153560676,153562135,153564921,153569603 153538513,153541556,153541926,153542448,153543168,153546129,153547999,153548854,153549739,153550286,153553269,153556228,153556418,153557023,153558303,153559942,153560887,153562242,153565103,153569969 Gene ID= ENSG00000067842.17 TPM= 5.66 Transcript Type= NA chrX 153587920 153599198 153587920 153599198 - transcript2129.chrX.nnic@FAM58A transcript2129.chrX.nnic protein_coding 153598962,153596004,153594547,153592506,153587920 153599198,153596187,153594679,153592703,153588394 Gene ID= ENSG00000262919.7 TPM= 2.72 Transcript Type= NA chrX 153687909 153696593 153687909 153696593 + transcript2139.chrX.nic@SLC6A8 transcript2139.chrX.nic protein_coding 153687909,153690375,153691304,153691975,153693041,153693263,153693492,153693905,153694130,153694344,153694533,153694719,153695074 153688836,153690506,153691553,153692107,153693175,153693366,153693586,153694017,153694267,153694446,153694633,153694889,153696593 Gene ID= ENSG00000130821.15 TPM= 16.3 Transcript Type= NA chrX 153689092 153696593 153689092 153696593 + transcript2143.chrX.nnic@SLC6A8 transcript2143.chrX.nnic protein_coding 153689092,153690375,153691304,153691975,153693041,153693263,153693462,153693905,153694130,153694344,153694533,153694719,153695074 153689153,153690506,153691553,153692107,153693175,153693366,153693586,153694017,153694267,153694446,153694633,153694889,153696593 Gene ID= ENSG00000130821.15 TPM= 17.21 Transcript Type= NA chrX 153700498 153724385 153700498 153724385 - transcript2152.chrX.nic@BCAP31 transcript2152.chrX.nic protein_coding 153724201,153723153,153720872,153715542,153703959,153702935,153702007,153700498 153724385,153723288,153720972,153715689,153704094,153703058,153702107,153700975 Gene ID= ENSG00000185825.15 TPM= 30.09 Transcript Type= NA chrX 153700497 153724697 153700497 153724697 - ENST00000345046.10@BCAP31 ENST00000345046.10 protein_coding 153724334,153723153,153720872,153715542,153703959,153702935,153702007,153700497 153724697,153723288,153720972,153715689,153704094,153703058,153702107,153700975 Gene ID= ENSG00000185825.15 TPM= 672.97 Transcript Type= protein_coding chrX 153700499 153724094 153700499 153724094 - ENST00000458587.6@BCAP31 ENST00000458587.6 protein_coding 153723508,153723153,153720872,153715542,153703959,153702935,153702007,153700499 153724094,153723288,153720972,153715689,153704094,153703058,153702107,153700975 Gene ID= ENSG00000185825.15 TPM= 28.77 Transcript Type= protein_coding chrX 153724868 153744762 153724868 153744762 + ENST00000218104.5@ABCD1 ENST00000218104.5 protein_coding 153724868,153729232,153736112,153736345,153737157,153740092,153740574,153742987,153743221,153743489 153726166,153729412,153736254,153736513,153737251,153740237,153740719,153743071,153743346,153744762 Gene ID= ENSG00000101986.11 TPM= 58.86 Transcript Type= protein_coding chrX 153762405 153766485 153762405 153766485 - transcript2186.chrX.nnic@U52111.1 transcript2186.chrX.nnic antisense_RNA 153766383,153763710,153763363,153762405 153766485,153763817,153763473,153763095 Gene ID= ENSG00000232725.1 TPM= 1.81 Transcript Type= NA chrX 153764199 153779346 153764199 153779346 + transcript2171.chrX.nnic@PLXNB3 transcript2171.chrX.nnic protein_coding 153764199,153765471,153767729,153768249,153768948,153769162,153769807,153770092,153770338,153770528,153770758,153770965,153771310,153771486,153771864,153772182,153772886,153773230,153773518,153773859,153774186,153774420,153774706,153774880,153775225,153775594,153775887,153776356,153776887,153777208,153777528,153777948,153778261,153778396,153778600,153778935 153764304,153765580,153767913,153768428,153769076,153769262,153769939,153770248,153770446,153770642,153770883,153771081,153771403,153771655,153772015,153772287,153773016,153773406,153773713,153774098,153774344,153774571,153774806,153775103,153775403,153775660,153776214,153776459,153776980,153777380,153777688,153778095,153778325,153778471,153778674,153779346 Gene ID= ENSG00000198753.11 TPM= 10.71 Transcript Type= NA chrX 153764199 153779346 153764199 153779346 + transcript2175.chrX.nnic@PLXNB3 transcript2175.chrX.nnic protein_coding 153764199,153765471,153766873,153768249,153768948,153769162,153769807,153770092,153770338,153770528,153770758,153770965,153771310,153772221,153772886,153773230,153773518,153773859,153774186,153774420,153774706,153774880,153775225,153775594,153775887,153776356,153776887,153777208,153777528,153777948,153778261,153778396,153778600,153778935 153764304,153765580,153767913,153768428,153769076,153769262,153769939,153770248,153770446,153770642,153770883,153771081,153771403,153772287,153773016,153773406,153773713,153774098,153774344,153774571,153774806,153775103,153775403,153775660,153776214,153776459,153776980,153777380,153777688,153778095,153778325,153778471,153778674,153779346 Gene ID= ENSG00000198753.11 TPM= 5.73 Transcript Type= NA chrX 153764256 153779341 153764256 153779341 + ENST00000361971.9@PLXNB3 ENST00000361971.9 protein_coding 153764256,153765471,153766873,153768249,153768948,153769162,153769807,153770092,153770338,153770528,153770758,153770965,153771310,153771486,153771864,153772182,153772886,153773230,153773518,153773859,153774186,153774420,153774706,153774880,153775225,153775594,153775887,153776356,153776887,153777208,153777528,153777948,153778261,153778396,153778600,153778935 153764304,153765580,153767913,153768428,153769076,153769262,153769939,153770248,153770446,153770642,153770883,153771081,153771403,153771655,153772015,153772287,153773016,153773406,153773713,153774098,153774344,153774571,153774806,153775103,153775403,153775660,153776214,153776459,153776980,153777380,153777688,153778095,153778325,153778471,153778674,153779341 Gene ID= ENSG00000198753.11 TPM= 10.71 Transcript Type= protein_coding chrX 153785766 153794523 153785766 153794523 - ENST00000217901.9@IDH3G ENST00000217901.9 protein_coding 153794246,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153786212,153785766 153794523,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272,153785973 Gene ID= ENSG00000067829.18 TPM= 135.68 Transcript Type= protein_coding chrX 153785766 153794512 153785766 153794512 - ENST00000370092.7@IDH3G ENST00000370092.7 protein_coding 153794246,153790810,153790564,153790195,153789712,153788075,153787823,153787464,153787051,153786801,153786355,153785766 153794512,153790851,153790575,153790292,153789824,153788135,153787955,153787597,153787153,153786947,153786449,153786272 Gene ID= ENSG00000067829.18 TPM= 4.83 Transcript Type= protein_coding chrX 153794579 153798508 153794579 153798508 + transcript2206.chrX.nic@SSR4 transcript2206.chrX.nic protein_coding 153794579,153795663,153797458,153797725,153798071,153798329 153794754,153796552,153797532,153797814,153798136,153798508 Gene ID= ENSG00000180879.13 TPM= 9.96 Transcript Type= NA chrX 153794639 153798505 153794639 153798505 + ENST00000370086.7@SSR4 ENST00000370086.7 protein_coding 153794639,153796434,153797458,153797725,153798071,153798329 153794754,153796552,153797532,153797814,153798136,153798505 Gene ID= ENSG00000180879.13 TPM= 196.35 Transcript Type= protein_coding chrX 153794679 153798493 153794679 153798493 + ENST00000471880.5@SSR4 ENST00000471880.5 protein_coding 153794679,153795663,153796439,153797458,153797725,153798071,153798329 153794754,153795861,153796552,153797532,153797814,153798136,153798493 Gene ID= ENSG00000180879.13 TPM= 3.62 Transcript Type= processed_transcript chrX 153861514 153886146 153861514 153886146 - ENST00000370060.5@L1CAM ENST00000370060.5 protein_coding 153886065,153875761,153873228,153872592,153872152,153871057,153870790,153870388,153870056,153869803,153869520,153868841,153868561,153868302,153867998,153867800,153867356,153867054,153866649,153865704,153865299,153865088,153864821,153864585,153864322,153863883,153863477,153863368,153861514 153886146,153875944,153873242,153872697,153872354,153871179,153870960,153870499,153870240,153869934,153869663,153868952,153868727,153868458,153868122,153867910,153867553,153867124,153866871,153865819,153865500,153865210,153864994,153864704,153864477,153864017,153863549,153863379,153862894 Gene ID= ENSG00000198910.12 TPM= 1.81 Transcript Type= protein_coding chrX 153904735 153907166 153904735 153907166 + ENST00000358927.6@AVPR2 ENST00000358927.6 protein_coding 153904735,153904974,153905532,153906523 153904771,153905170,153906416,153907166 Gene ID= ENSG00000126895.13 TPM= 5.43 Transcript Type= protein_coding chrX 153907377 153928493 153907377 153928493 - transcript2211.chrX.nic@ARHGAP4 transcript2211.chrX.nic protein_coding 153928327,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377 153928493,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 3.55 Transcript Type= NA chrX 153907378 153926308 153907378 153926308 - transcript2213.chrX.nic@ARHGAP4 transcript2213.chrX.nic protein_coding 153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907378 153926308,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 3.17 Transcript Type= NA chrX 153907162 153926308 153907162 153926308 - transcript2216.chrX.nic@ARHGAP4 transcript2216.chrX.nic protein_coding 153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910171,153910012,153909741,153909443,153909070,153907162 153926308,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910085,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 12.9 Transcript Type= NA chrX 153907377 153926308 153907377 153926308 - transcript2217.chrX.nic@ARHGAP4 transcript2217.chrX.nic protein_coding 153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377 153926308,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 2.94 Transcript Type= NA chrX 153907377 153926308 153907377 153926308 - transcript2219.chrX.nic@ARHGAP4 transcript2219.chrX.nic protein_coding 153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910012,153909741,153909443,153909070,153907377 153926308,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 2.04 Transcript Type= NA chrX 153907377 153926244 153907377 153926244 - ENST00000350060.9@ARHGAP4 ENST00000350060.9 protein_coding 153926136,153921605,153921365,153921097,153920626,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907377 153926244,153921809,153921527,153921159,153920808,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 35.24 Transcript Type= protein_coding chrX 153907376 153926260 153907376 153926260 - ENST00000370028.7@ARHGAP4 ENST00000370028.7 protein_coding 153926136,153921605,153921365,153921097,153920626,153919567,153919155,153918832,153913778,153913409,153913218,153913024,153912700,153911129,153910922,153910700,153910506,153910171,153910012,153909741,153909443,153909070,153907376 153926260,153921809,153921527,153921159,153920808,153919686,153919283,153919053,153913879,153913600,153913302,153913051,153912802,153911189,153910999,153910834,153910611,153910404,153910085,153909924,153909535,153909169,153907962 Gene ID= ENSG00000089820.15 TPM= 5.36 Transcript Type= protein_coding chrX 153929242 153935223 153929242 153935223 - ENST00000464845.5@NAA10 ENST00000464845.5 protein_coding 153934884,153934377,153933943,153932539,153932316,153932071,153930763,153929242 153935223,153934475,153934001,153932584,153932431,153932115,153930847,153930223 Gene ID= ENSG00000102030.15 TPM= 43.47 Transcript Type= protein_coding chrX 153929335 153935068 153929335 153935068 - transcript2228.chrX.nic@NAA10 transcript2228.chrX.nic protein_coding 153934884,153934377,153933943,153932539,153930763,153929335 153935068,153934475,153934001,153932584,153932431,153930223 Gene ID= ENSG00000102030.15 TPM= 7.24 Transcript Type= NA chrX 153929924 153935015 153929924 153935015 - ENST00000370009.5@NAA10 ENST00000370009.5 protein_coding 153934884,153934377,153933943,153932539,153932316,153930763,153929924 153935015,153934475,153934001,153932584,153932431,153930847,153930223 Gene ID= ENSG00000102030.15 TPM= 3.17 Transcript Type= protein_coding chrX 153929926 153935015 153929926 153935015 - ENST00000466877.5@NAA10 ENST00000466877.5 protein_coding 153934884,153934377,153933943,153932539,153932071,153930763,153929926 153935015,153934475,153934001,153932584,153932431,153930847,153930223 Gene ID= ENSG00000102030.15 TPM= 4.98 Transcript Type= retained_intron chrX 153972327 153983195 153972327 153983195 + ENST00000369982.4@TMEM187 ENST00000369982.4 protein_coding 153972327,153981850 153972860,153983195 Gene ID= ENSG00000177854.7 TPM= 44.37 Transcript Type= protein_coding chrX 154010503 154019976 154010503 154019976 - transcript2237.chrX.nnic@IRAK1 transcript2237.chrX.nnic protein_coding 154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014139,154014042,154013043,154012529,154010503 154019976,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154014095,154013433,154012678,154011917 Gene ID= ENSG00000184216.13 TPM= 21.54 Transcript Type= NA chrX 154010503 154019902 154010503 154019902 - transcript2251.chrX.nic@IRAK1 transcript2251.chrX.nic protein_coding 154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010503 154019902,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917 Gene ID= ENSG00000184216.13 TPM= 15.2 Transcript Type= NA chrX 154010500 154019980 154010500 154019980 - ENST00000369980.7@IRAK1 ENST00000369980.7 protein_coding 154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154014042,154013043,154012529,154010500 154019980,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154014278,154013433,154012678,154011917 Gene ID= ENSG00000184216.13 TPM= 209.9 Transcript Type= protein_coding chrX 154010506 154019876 154010506 154019876 - ENST00000369974.6@IRAK1 ENST00000369974.6 protein_coding 154019677,154019431,154019197,154018975,154018599,154018291,154018006,154016949,154016437,154016032,154013043,154012529,154010506 154019876,154019598,154019328,154019078,154018787,154018355,154018120,154017067,154016644,154016097,154013433,154012678,154011917 Gene ID= ENSG00000184216.13 TPM= 2.53 Transcript Type= protein_coding chrX 154030234 154097764 154030234 154097764 - ENST00000453960.6@MECP2 ENST00000453960.6 protein_coding 154097604,154032207,154030234 154097764,154032557,154031450 Gene ID= ENSG00000169057.21 TPM= 21.73 Transcript Type= protein_coding chrX 154030239 154097737 154030239 154097737 - ENST00000628176.2@MECP2 ENST00000628176.2 protein_coding 154097604,154092184,154032207,154031396,154030239 154097737,154092307,154032557,154031450,154031286 Gene ID= ENSG00000169057.21 TPM= 5.43 Transcript Type= protein_coding chrX 154348532 154374638 154348532 154374638 - ENST00000422373.5@FLNA ENST00000422373.5 protein_coding 154374506,154370873,154367842,154367641,154367397,154366732,154366562,154366308,154366024,154365349,154365136,154364821,154364526,154364259,154364022,154362661,154362418,154362242,154361979,154361670,154361308,154359990,154359732,154359484,154359246,154358984,154358445,154358199,154357434,154354825,154354616,154354381,154354151,154353915,154353554,154353296,154353001,154352772,154352553,154352181,154351884,154351581,154350909,154350031,154349649,154349362,154348532 154374638,154371361,154368090,154367738,154367544,154366850,154366639,154366470,154366224,154365486,154365259,154364957,154364719,154364372,154364165,154362784,154362578,154362332,154362148,154361787,154361570,154360587,154359905,154359646,154359406,154359154,154358568,154358355,154357623,154355072,154354711,154354483,154354291,154354043,154353727,154353457,154353204,154352924,154352675,154352447,154352021,154351696,154351041,154350207,154349867,154349565,154349036 Gene ID= ENSG00000196924.14 TPM= 138.1 Transcript Type= protein_coding chrX 154348529 154371222 154348529 154371222 - ENST00000369856.7@FLNA ENST00000369856.7 protein_coding 154370873,154367842,154367641,154367397,154366732,154366562,154366308,154366024,154365349,154365136,154364821,154364526,154364259,154364022,154362661,154362418,154362242,154361979,154361670,154361308,154359990,154359732,154359484,154359246,154358984,154358445,154358199,154357434,154357251,154354825,154354616,154354381,154354151,154353915,154353554,154353296,154353001,154352772,154352553,154352181,154351884,154351581,154350909,154350031,154349649,154349362,154348529 154371222,154368090,154367738,154367544,154366850,154366639,154366470,154366224,154365486,154365259,154364957,154364719,154364372,154364165,154362784,154362578,154362332,154362148,154361787,154361570,154360587,154359905,154359646,154359406,154359154,154358568,154358355,154357623,154357274,154355072,154354711,154354483,154354291,154354043,154353727,154353457,154353204,154352924,154352675,154352447,154352021,154351696,154351041,154350207,154349867,154349565,154349036 Gene ID= ENSG00000196924.14 TPM= 119.08 Transcript Type= protein_coding chrX 154379197 154381523 154379197 154381523 + ENST00000369842.8@EMD ENST00000369842.8 protein_coding 154379197,154379690,154379942,154380234,154380753,154380882 154379566,154379794,154380019,154380367,154380802,154381523 Gene ID= ENSG00000102119.10 TPM= 12.68 Transcript Type= protein_coding chrX 154379228 154381521 154379228 154381521 + transcript2289.chrX.nnic@EMD transcript2289.chrX.nnic protein_coding 154379228,154379690,154379942,154381456 154379566,154379794,154379959,154381521 Gene ID= ENSG00000102119.10 TPM= 1.81 Transcript Type= NA chrX 154398372 154402339 154398372 154402339 + ENST00000344746.8@RPL10 ENST00000344746.8 protein_coding 154398372,154399338,154399487,154399803,154400464,154400702 154398542,154399396,154399594,154399941,154400626,154402339 Gene ID= ENSG00000147403.16 TPM= 1309.87 Transcript Type= protein_coding chrX 154398377 154400913 154398377 154400913 + ENST00000491035.5@RPL10 ENST00000491035.5 protein_coding 154398377,154399338,154399487,154399803,154400702 154398542,154399396,154399594,154400626,154400913 Gene ID= ENSG00000147403.16 TPM= 6.79 Transcript Type= retained_intron chrX 154398497 154400913 154398497 154400913 + ENST00000467168.5@RPL10 ENST00000467168.5 protein_coding 154398497,154399338,154399487,154399803,154400464 154398542,154399396,154399594,154399941,154400913 Gene ID= ENSG00000147403.16 TPM= 5.43 Transcript Type= retained_intron chrX 154401760 154412135 154401760 154412135 - transcript2300.chrX.nnic@DNASE1L1 transcript2300.chrX.nnic protein_coding 154411681,154409418,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401760 154412135,154409675,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 2.16 Transcript Type= NA chrX 154401760 154412101 154401760 154412101 - transcript2302.chrX.nic@DNASE1L1 transcript2302.chrX.nic protein_coding 154411891,154409418,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401760 154412101,154409813,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 3.07 Transcript Type= NA chrX 154401760 154412101 154401760 154412101 - transcript2304.chrX.nnic@DNASE1L1 transcript2304.chrX.nnic protein_coding 154411891,154409418,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401760 154412101,154410871,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 3.07 Transcript Type= NA chrX 154401760 154412128 154401760 154412128 - transcript2320.chrX.nic@DNASE1L1 transcript2320.chrX.nic protein_coding 154411891,154409418,154409112,154405434,154404995,154404828,154403522,154403269,154401760 154412128,154409675,154409196,154405655,154405083,154404914,154403622,154403381,154403190 Gene ID= ENSG00000013563.13 TPM= 2.26 Transcript Type= NA chrX 154401760 154412043 154401760 154412043 - transcript2343.chrX.nic@DNASE1L1 transcript2343.chrX.nic protein_coding 154409112,154405434,154404995,154404828,154403522,154403269,154401760 154412043,154405655,154405083,154404914,154403622,154403381,154403190 Gene ID= ENSG00000013563.13 TPM= 2.26 Transcript Type= NA chrX 154401238 154412090 154401238 154412090 - ENST00000369809.5@DNASE1L1 ENST00000369809.5 protein_coding 154411891,154409418,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401238 154412090,154409675,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 21.18 Transcript Type= protein_coding chrX 154401758 154409276 154401758 154409276 - ENST00000369807.5@DNASE1L1 ENST00000369807.5 protein_coding 154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401758 154409276,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 20.28 Transcript Type= protein_coding chrX 154401761 154412112 154401761 154412112 - ENST00000309585.9@DNASE1L1 ENST00000309585.9 protein_coding 154411891,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401761 154412112,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 8.38 Transcript Type= protein_coding chrX 154401758 154410039 154401758 154410039 - ENST00000014935.7@DNASE1L1 ENST00000014935.7 protein_coding 154409418,154409112,154405434,154404995,154404828,154403522,154403269,154402942,154401758 154410039,154409196,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 1.26 Transcript Type= protein_coding chrX 154401758 154409278 154401758 154409278 - ENST00000369808.7@DNASE1L1 ENST00000369808.7 protein_coding 154408558,154405434,154404995,154404828,154403522,154403269,154402942,154401758 154409278,154405655,154405083,154404914,154403622,154403381,154403190,154402841 Gene ID= ENSG00000013563.13 TPM= 5.79 Transcript Type= protein_coding chrX 154411468 154421720 154411468 154421720 + transcript2297.chrX.nic@TAZ transcript2297.chrX.nic protein_coding 154411468,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903 154411952,154412214,154413339,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421720 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411549 154421722 154411549 154421722 + transcript2298.chrX.nic@TAZ transcript2298.chrX.nic protein_coding 154411549,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903 154412006,154412214,154413252,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411546 154421722 154411546 154421722 + transcript2310.chrX.nic@TAZ transcript2310.chrX.nic protein_coding 154411546,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903 154411952,154412214,154413339,154413567,154419623,154419746,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411546 154421722 154411546 154421722 + transcript2311.chrX.nic@TAZ transcript2311.chrX.nic protein_coding 154411546,154412086,154413207,154413482,154414101,154419543,154419705,154420212,154420658,154420903 154411952,154412214,154413358,154413567,154414190,154419623,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411539 154421722 154411539 154421722 + transcript2321.chrX.nic@TAZ transcript2321.chrX.nic protein_coding 154411539,154412086,154413207,154413482,154414101,154419543,154420212,154420658,154420903 154411952,154412214,154413252,154413567,154414190,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.99 Transcript Type= NA chrX 154411539 154421722 154411539 154421722 + transcript2326.chrX.nic@TAZ transcript2326.chrX.nic protein_coding 154411539,154412086,154413207,154413482,154414101,154419543,154420212,154420658,154420903 154411952,154412214,154413358,154413567,154414190,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 6.52 Transcript Type= NA chrX 154411539 154421722 154411539 154421722 + transcript2327.chrX.nic@TAZ transcript2327.chrX.nic protein_coding 154411539,154412086,154413207,154413482,154419543,154419705,154420212,154420658,154420903 154411952,154412214,154413358,154413567,154419623,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 2.72 Transcript Type= NA chrX 154411745 154421722 154411745 154421722 + transcript2329.chrX.nnic@TAZ transcript2329.chrX.nnic protein_coding 154411745,154412086,154413207,154414101,154419657,154420032,154420212,154420658,154420903 154411952,154412214,154413567,154414190,154419746,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411549 154421722 154411549 154421722 + transcript2330.chrX.nic@TAZ transcript2330.chrX.nic protein_coding 154411549,154412086,154413207,154419543,154419705,154420032,154420212,154420658,154420903 154411952,154412214,154413567,154419623,154419746,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411547 154421722 154411547 154421722 + transcript2337.chrX.nic@TAZ transcript2337.chrX.nic protein_coding 154411547,154412086,154413207,154413482,154419543,154420212,154420658,154420903 154411952,154412214,154413339,154413567,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 2.9 Transcript Type= NA chrX 154411549 154421722 154411549 154421722 + transcript2344.chrX.nic@TAZ transcript2344.chrX.nic protein_coding 154411549,154412086,154413207,154413482,154419543,154420658,154420903 154411952,154412214,154413252,154413567,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= NA chrX 154411547 154422335 154411547 154422335 + transcript2346.chrX.nic@TAZ transcript2346.chrX.nic protein_coding 154411547,154412086,154413207,154419543,154420212,154420658,154420903 154411952,154412214,154413567,154420094,154420264,154420735,154422335 Gene ID= ENSG00000102125.15 TPM= 2.9 Transcript Type= NA chrX 154411539 154421722 154411539 154421722 + transcript2348.chrX.nic@TAZ transcript2348.chrX.nic protein_coding 154411539,154412086,154419543,154420212,154420658,154420903 154411952,154413567,154420094,154420264,154420735,154421722 Gene ID= ENSG00000102125.15 TPM= 1.99 Transcript Type= NA chrX 154411556 154421720 154411556 154421720 + ENST00000612460.4@TAZ ENST00000612460.4 protein_coding 154411556,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903 154411952,154412214,154413252,154413567,154419623,154419746,154420094,154420264,154420735,154421720 Gene ID= ENSG00000102125.15 TPM= 7.24 Transcript Type= protein_coding chrX 154411561 154421726 154411561 154421726 + ENST00000615986.4@TAZ ENST00000615986.4 protein_coding 154411561,154412086,154413207,154413482,154419543,154419705,154420032,154420212,154420658,154420903 154411952,154412214,154413358,154413567,154419623,154419746,154420094,154420264,154420735,154421726 Gene ID= ENSG00000102125.15 TPM= 5.43 Transcript Type= nonsense_mediated_decay chrX 154411556 154421726 154411556 154421726 + ENST00000601016.5@TAZ ENST00000601016.5 protein_coding 154411556,154412086,154413207,154413482,154414101,154419543,154419705,154420032,154420212,154420658,154420903 154411952,154412214,154413252,154413567,154414190,154419623,154419746,154420094,154420264,154420735,154421726 Gene ID= ENSG00000102125.15 TPM= 5.43 Transcript Type= protein_coding chrX 154411541 154421726 154411541 154421726 + ENST00000475699.5@TAZ ENST00000475699.5 protein_coding 154411541,154412086,154413207,154413482,154414101,154419543,154420032,154420212,154420658,154420903 154411952,154412214,154413252,154413567,154414190,154419623,154420094,154420264,154420735,154421726 Gene ID= ENSG00000102125.15 TPM= 1.81 Transcript Type= protein_coding chrX 154424380 154428479 154424380 154428479 - ENST00000360656.2@CH17-340M24.3 ENST00000360656.2 lincRNA 154428128,154424380 154428479,154424625 Gene ID= ENSG00000197180.2 TPM= 9.06 Transcript Type= lincRNA chrX 154428632 154436516 154428632 154436516 + ENST00000369762.6@ATP6AP1 ENST00000369762.6 protein_coding 154428632,154429048,154431830,154432266,154432931,154433635,154434208,154435139,154435274,154435682 154428853,154429174,154431904,154432459,154432971,154433720,154434446,154435186,154435505,154436516 Gene ID= ENSG00000071553.16 TPM= 476.32 Transcript Type= protein_coding chrX 154437159 154443466 154437159 154443466 + transcript2371.chrX.nic@GDI1 transcript2371.chrX.nic protein_coding 154437159,154438523,154438765,154439006,154439941,154441096,154441623,154442111,154442374,154442520 154437299,154438630,154438864,154439140,154440506,154441195,154441794,154442255,154442428,154443466 Gene ID= ENSG00000203879.11 TPM= 12.83 Transcript Type= NA chrX 154436920 154443467 154436920 154443467 + ENST00000447750.6@GDI1 ENST00000447750.6 protein_coding 154436920,154438523,154438765,154439006,154439941,154440375,154441096,154441623,154442111,154442374,154442520 154437299,154438630,154438864,154439140,154440139,154440506,154441195,154441794,154442255,154442428,154443467 Gene ID= ENSG00000203879.11 TPM= 117.87 Transcript Type= protein_coding chrX 154444375 154450654 154444375 154450654 + transcript2377.chrX.nic@FAM50A transcript2377.chrX.nic protein_coding 154444375,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154449883,154450029,154450209,154450424 154444909,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449735,154449931,154450099,154450319,154450654 Gene ID= ENSG00000071859.14 TPM= 2.72 Transcript Type= NA chrX 154444126 154450654 154444126 154450654 + ENST00000393600.7@FAM50A ENST00000393600.7 protein_coding 154444126,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154449883,154450029,154450209,154450424 154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449735,154449931,154450099,154450319,154450654 Gene ID= ENSG00000071859.14 TPM= 91.46 Transcript Type= protein_coding chrX 154444155 154450654 154444155 154450654 + ENST00000464419.5@FAM50A ENST00000464419.5 protein_coding 154444155,154445633,154445812,154446415,154448484,154448690,154448893,154449221,154449681,154450029,154450209,154450424 154444346,154445717,154445911,154446560,154448560,154448756,154448954,154449297,154449931,154450099,154450319,154450654 Gene ID= ENSG00000071859.14 TPM= 7.24 Transcript Type= retained_intron chrX 154458281 154477779 154458281 154477779 + ENST00000369682.4@PLXNA3 ENST00000369682.4 protein_coding 154458281,154460157,154461099,154462128,154463391,154463590,154463951,154464157,154464402,154464754,154465018,154465424,154465657,154465935,154466150,154466376,154466623,154467057,154467232,154467545,154467767,154468082,154468303,154468663,154468823,154469056,154469379,154469688,154469977,154470442,154471105,154471488,154472590 154458428,154460777,154461638,154462310,154463519,154463690,154464074,154464313,154464501,154464868,154465218,154465520,154465847,154466080,154466270,154466512,154466793,154467150,154467471,154467688,154468001,154468224,154468559,154468729,154468969,154469215,154469482,154469784,154470167,154470611,154471317,154471638,154477779 Gene ID= ENSG00000130827.6 TPM= 22.64 Transcript Type= protein_coding chrX 154477769 154479257 154477769 154479257 - ENST00000357360.4@LAGE3 ENST00000357360.4 protein_coding 154478728,154478283,154477769 154479257,154478411,154478058 Gene ID= ENSG00000196976.7 TPM= 57.95 Transcript Type= protein_coding chrX 154483713 154486699 154483713 154486699 - transcript2403.chrX.nic@UBL4A transcript2403.chrX.nic protein_coding 154486537,154485771,154483713 154486699,154486333,154485649 Gene ID= ENSG00000102178.12 TPM= 16.3 Transcript Type= NA chrX 154483717 154486670 154483717 154486670 - ENST00000369660.8@UBL4A ENST00000369660.8 protein_coding 154486537,154486228,154485771,154483717 154486670,154486333,154485979,154485649 Gene ID= ENSG00000102178.12 TPM= 194.69 Transcript Type= protein_coding chrX 154487313 154490710 154487313 154490710 - transcript2407.chrX.nic@SLC10A3 transcript2407.chrX.nic protein_coding 154490307,154488584,154487313 154490710,154489082,154488496 Gene ID= ENSG00000126903.15 TPM= 13.58 Transcript Type= NA chrX 154487306 154490614 154487306 154490614 - ENST00000369649.8@SLC10A3 ENST00000369649.8 protein_coding 154490594,154490307,154488584,154487306 154490614,154490358,154489082,154488496 Gene ID= ENSG00000126903.15 TPM= 8.15 Transcript Type= protein_coding chrX 154487343 154490663 154487343 154490663 - ENST00000393587.4@SLC10A3 ENST00000393587.4 protein_coding 154490594,154490307,154487343 154490663,154490358,154489082 Gene ID= ENSG00000126903.15 TPM= 4.53 Transcript Type= protein_coding chrX 154506171 154516239 154506171 154516239 - ENST00000447601.6@FAM3A ENST00000447601.6 protein_coding 154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506171 154516239,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906 Gene ID= ENSG00000071889.16 TPM= 56.23 Transcript Type= protein_coding chrX 154506171 154516242 154506171 154516242 - ENST00000621967.4@FAM3A ENST00000621967.4 protein_coding 154515760,154512823,154512314,154511848,154508474,154508289,154507811,154507406,154507203,154506171 154516242,154512936,154512411,154511871,154508597,154508347,154507861,154507490,154507329,154506906 Gene ID= ENSG00000071889.16 TPM= 21.82 Transcript Type= nonsense_mediated_decay chrX 154506159 154516236 154506159 154516236 - ENST00000359889.9@FAM3A ENST00000359889.9 protein_coding 154515910,154515760,154512823,154511848,154508474,154508289,154507811,154507406,154507203,154506159 154516236,154515812,154512936,154511871,154508597,154508347,154507861,154507490,154507329,154506906 Gene ID= ENSG00000071889.16 TPM= 60.76 Transcript Type= protein_coding chrX 154506160 154516242 154506160 154516242 - ENST00000419205.5@FAM3A ENST00000419205.5 protein_coding 154515760,154512823,154511848,154508474,154508289,154507406,154507203,154506160 154516242,154512936,154511871,154508597,154508347,154507490,154507329,154506906 Gene ID= ENSG00000071889.16 TPM= 3.26 Transcript Type= protein_coding chrX 154506160 154516242 154506160 154516242 - ENST00000322269.10@FAM3A ENST00000322269.10 protein_coding 154515910,154515760,154512823,154512314,154511848,154508474,154508289,154507811,154507406,154507203,154506160 154516242,154515812,154512936,154512411,154511871,154508597,154508347,154507861,154507490,154507329,154506906 Gene ID= ENSG00000071889.16 TPM= 2.81 Transcript Type= protein_coding chrX 154531391 154546849 154531391 154546849 - transcript2420.chrX.nnic@G6PD transcript2420.chrX.nnic protein_coding 154546789,154546036,154536141,154535937,154535168,154534338,154534035,154533576,154532942,154532567,154532436,154531391 154546849,154546163,154536178,154536045,154535385,154534496,154534160,154533669,154533128,154532802,154532462,154531622 Gene ID= ENSG00000160211.15 TPM= 7.24 Transcript Type= NA chrX 154541223 154565047 154541223 154565047 + transcript2423.chrX.nic@IKBKG transcript2423.chrX.nic protein_coding 154541223,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319 154541391,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565047 Gene ID= ENSG00000269335.5 TPM= 9.44 Transcript Type= NA chrX 154547307 154565046 154547307 154565046 + ENST00000594239.5@IKBKG ENST00000594239.5 protein_coding 154547307,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319 154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046 Gene ID= ENSG00000269335.5 TPM= 44.75 Transcript Type= protein_coding chrX 154547311 154565047 154547311 154565047 + transcript2436.chrX.nic@IKBKG transcript2436.chrX.nic protein_coding 154547311,154551988,154556165,154558532,154560407,154561688,154563559,154563959,154564319 154547745,154552189,154556376,154558650,154560559,154562953,154563701,154564020,154565047 Gene ID= ENSG00000269335.5 TPM= 7.75 Transcript Type= NA chrX 154542244 154565046 154542244 154565046 + ENST00000618670.4@IKBKG ENST00000618670.4 protein_coding 154542244,154551988,154556165,154558532,154560407,154561688,154562810,154563559,154563959,154564319 154542452,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565046 Gene ID= ENSG00000269335.5 TPM= 13.06 Transcript Type= protein_coding chrX 154547641 154565033 154547641 154565033 + ENST00000617207.4@IKBKG ENST00000617207.4 protein_coding 154547641,154551988,154556165,154558535,154560407,154561688,154562810,154563559,154563959,154564319 154547745,154552189,154556376,154558650,154560559,154561784,154562953,154563701,154564020,154565033 Gene ID= ENSG00000269335.5 TPM= 1.1 Transcript Type= protein_coding chrX 154762742 154777688 154762742 154777688 + ENST00000620277.4@DKC1 ENST00000620277.4 protein_coding 154762742,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154776187,154776799 154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154775273,154776324,154777688 Gene ID= ENSG00000130826.17 TPM= 2.72 Transcript Type= protein_coding chrX 154762756 154777689 154762756 154777689 + ENST00000369550.9@DKC1 ENST00000369550.9 protein_coding 154762756,154764899,154765444,154765907,154766216,154766997,154767256,154768302,154769167,154770759,154773131,154774602,154775195,154776187,154776799 154762981,154764966,154765530,154765998,154766400,154767061,154767382,154768432,154769310,154770879,154773249,154774705,154775273,154776324,154777689 Gene ID= ENSG00000130826.17 TPM= 57.05 Transcript Type= protein_coding chrX 154778684 154805521 154778684 154805521 - ENST00000369534.7@MPP1 ENST00000369534.7 protein_coding 154805272,154792142,154791769,154790983,154789954,154786204,154785051,154784028,154783427,154781600,154781239,154778684 154805521,154792285,154791847,154791068,154790022,154786400,154785157,154784108,154783507,154781802,154781313,154779353 Gene ID= ENSG00000130830.14 TPM= 57.05 Transcript Type= protein_coding chrX 154835795 155022753 154835795 155022753 - ENST00000360256.8@F8 ENST00000360256.8 protein_coding 155022410,154999479,154996973,154992936,154987237,154984687,154969331,154966426,154965970,154961075,154956957,154953892,154947698,154928571,154906420,154904811,154904296,154903906,154902051,154901371,154899866,154896077,154863083,154861718,154860432,154835795 155022753,154999600,154997095,154993148,154987305,154984803,154969552,154966687,154966141,154961168,154957171,154954042,154947907,154931676,154906573,154905023,154904524,154904088,154902167,154901442,154899951,154896232,154863227,154861866,154860608,154837752 Gene ID= ENSG00000185010.13 TPM= 10.87 Transcript Type= protein_coding chrX 154835788 154886317 154835788 154886317 - ENST00000330287.10@F8 ENST00000330287.10 protein_coding 154886134,154863083,154861718,154860432,154835788 154886317,154863227,154861866,154860608,154837752 Gene ID= ENSG00000185010.13 TPM= 15.39 Transcript Type= protein_coding chrX 154886349 154888061 154886349 154888061 + ENST00000610495.1@F8A1 ENST00000610495.1 protein_coding 154886349 154888061 Gene ID= ENSG00000277203.1 TPM= 350.45 Transcript Type= protein_coding chrX 155026685 155060303 155026685 155060303 + ENST00000369498.7@FUNDC2 ENST00000369498.7 protein_coding 155026685,155033403,155046509,155051670,155054595 155027071,155033553,155046584,155051801,155060303 Gene ID= ENSG00000165775.17 TPM= 92.37 Transcript Type= protein_coding chrX 155061622 155071362 155061622 155071362 - ENST00000369484.7@CMC4 ENST00000369484.7 protein_coding 155070694,155063966,155061622 155071362,155064033,155061991 Gene ID= ENSG00000182712.15 TPM= 23.54 Transcript Type= protein_coding chrX 155061626 155071273 155061626 155071273 - transcript2464.chrX.nnic@MTCP1 transcript2464.chrX.nnic protein_coding 155070949,155063966,155061626 155071273,155064033,155061991 Gene ID= ENSG00000214827.9 TPM= 1.81 Transcript Type= NA chrX 155061626 155147932 155061626 155147932 - transcript2466.chrX.nnic@MTCP1 transcript2466.chrX.nnic protein_coding 155147660,155063966,155061626 155147932,155064033,155061991 Gene ID= ENSG00000214827.9 TPM= 2.72 Transcript Type= NA chrX 155071503 155123074 155071503 155123074 + ENST00000369462.5@BRCC3 ENST00000369462.5 protein_coding 155071503,155072327,155073377,155077170,155078616,155089263,155090784,155099315,155116057,155116711,155119999,155121223 155071650,155072343,155073431,155077289,155078703,155089351,155090839,155099389,155116188,155116754,155120168,155123074 Gene ID= ENSG00000185515.14 TPM= 3.62 Transcript Type= protein_coding chrX 155216460 155239838 155216460 155239838 + transcript2468.chrX.nnic@VBP1 transcript2468.chrX.nnic protein_coding 155216460,155236229,155238772 155216575,155236367,155239838 Gene ID= ENSG00000155959.10 TPM= 1.81 Transcript Type= NA chrX 155258241 155264589 155258241 155264589 - ENST00000369454.3@RAB39B ENST00000369454.3 protein_coding 155264074,155258241 155264589,155261229 Gene ID= ENSG00000155961.4 TPM= 3.62 Transcript Type= protein_coding chrX 155276034 155382049 155276034 155382049 - transcript2473.chrX.nnic@CLIC2 transcript2473.chrX.nnic protein_coding 155381874,155299036,155298785,155279962,155279149,155276034 155382049,155299145,155298910,155280068,155279330,155278064 Gene ID= ENSG00000155962.12 TPM= 3.62 Transcript Type= NA chrX 155276211 155334646 155276211 155334646 - ENST00000369449.6@CLIC2 ENST00000369449.6 protein_coding 155334371,155299036,155298785,155279962,155279149,155276211 155334646,155299145,155298910,155280068,155279330,155278064 Gene ID= ENSG00000155962.12 TPM= 8.15 Transcript Type= protein_coding chrX 155511439 155612965 155511439 155612965 - transcript2480.chrX.nic@TMLHE transcript2480.chrX.nic protein_coding 155612792,155545096,155524456,155513986,155511439 155612965,155545277,155524632,155514265,155511792 Gene ID= ENSG00000185973.10 TPM= 1.81 Transcript Type= NA chrX 155522257 155612965 155522257 155612965 - transcript2481.chrX.nic@TMLHE transcript2481.chrX.nic protein_coding 155612792,155545096,155522257 155612965,155545277,155524632 Gene ID= ENSG00000185973.10 TPM= 2.72 Transcript Type= NA chrX 155490115 155612936 155490115 155612936 - ENST00000334398.7@TMLHE ENST00000334398.7 protein_coding 155612792,155545096,155524456,155513986,155511673,155506898,155492357,155490115 155612936,155545277,155524632,155514265,155511792,155507134,155492495,155491666 Gene ID= ENSG00000185973.10 TPM= 22.64 Transcript Type= protein_coding chrX 155881293 155943769 155881293 155943769 + ENST00000286448.11@VAMP7 ENST00000286448.11 protein_coding 155881293,155889458,155895623,155898112,155900497,155919813,155939701,155941883 155881448,155889612,155895680,155898249,155900587,155919880,155939793,155943769 Gene ID= ENSG00000124333.15 TPM= 31.69 Transcript Type= protein_coding chrX 155881375 155943769 155881375 155943769 + ENST00000262640.11@VAMP7 ENST00000262640.11 protein_coding 155881375,155889458,155895623,155898112,155900497,155939701,155941883 155881448,155889612,155895680,155898249,155900587,155939793,155943769 Gene ID= ENSG00000124333.15 TPM= 2.72 Transcript Type= protein_coding chrY 304750 318819 304750 318819 - ENST00000326153.9_PAR_Y@GTPBP6 ENST00000326153.9_PAR_Y protein_coding 318439,316914,315229,314890,314150,312766,311419,307732,307360,304750 318819,317051,315299,315020,314217,312924,311627,307880,307512,305197 Gene ID= ENSG00000178605.13_PAR_Y TPM= 41.66 Transcript Type= protein_coding chrY 1336616 1382685 1336616 1382685 + ENST00000331035.9_PAR_Y@IL3RA ENST00000331035.9_PAR_Y protein_coding 1336616,1341728,1345316,1348431,1352100,1352322,1356221,1358861,1365138,1378659,1381023,1382391 1336926,1341829,1345434,1348545,1352232,1352506,1356336,1358887,1365252,1378764,1381104,1382685 Gene ID= ENSG00000185291.11_PAR_Y TPM= 5.43 Transcript Type= protein_coding chrY 1403141 1452929 1403141 1452929 - ENST00000381333.9_PAR_Y@ASMTL ENST00000381333.9_PAR_Y protein_coding 1452748,1442186,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141 1452929,1442317,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489 Gene ID= ENSG00000169093.15_PAR_Y TPM= 2.26 Transcript Type= protein_coding chrY 1403141 1452873 1403141 1452873 - ENST00000381317.8_PAR_Y@ASMTL ENST00000381317.8_PAR_Y protein_coding 1452748,1442186,1439097,1435694,1435022,1432269,1427734,1425525,1421658,1418982,1417973,1412732,1403141 1452873,1442317,1439144,1435758,1435083,1432377,1428121,1425687,1421842,1419114,1418116,1412854,1403489 Gene ID= ENSG00000169093.15_PAR_Y TPM= 16.75 Transcript Type= protein_coding chrY 1591593 1602514 1591593 1602514 + ENST00000313871.8_PAR_Y@AKAP17A ENST00000313871.8_PAR_Y protein_coding 1591593,1593444,1595384,1599192,1600659 1591769,1594224,1595532,1599432,1602514 Gene ID= ENSG00000197976.11_PAR_Y TPM= 60.67 Transcript Type= protein_coding chrY 1591623 1602502 1591623 1602502 + ENST00000474361.6_PAR_Y@AKAP17A ENST00000474361.6_PAR_Y protein_coding 1591623,1593444,1595384,1599192,1600138,1600659 1591769,1594224,1595532,1599432,1600207,1602502 Gene ID= ENSG00000197976.11_PAR_Y TPM= 19.92 Transcript Type= nonsense_mediated_decay chrY 2219516 2500978 2219516 2500978 - ENST00000334651.10_PAR_Y@DHRSX ENST00000334651.10_PAR_Y protein_coding 2500817,2425197,2408745,2291502,2266740,2243023,2219516 2500978,2425304,2408813,2291603,2266947,2243230,2221229 Gene ID= ENSG00000169084.13_PAR_Y TPM= 36.22 Transcript Type= protein_coding chrY 2691313 2741290 2691313 2741290 + ENST00000624481.4_PAR_Y@CD99 ENST00000624481.4_PAR_Y protein_coding 2691313,2714422,2717605,2719661,2720356,2722627,2723314,2726260,2738203,2740779 2691427,2714454,2717652,2719705,2720424,2722674,2723364,2726373,2738256,2741290 Gene ID= ENSG00000002586.18_PAR_Y TPM= 20.83 Transcript Type= protein_coding chrY 57067813 57130289 57067813 57130289 + ENST00000286448.11_PAR_Y@VAMP7 ENST00000286448.11_PAR_Y protein_coding 57067813,57075978,57082143,57084632,57087017,57106333,57126221,57128403 57067968,57076132,57082200,57084769,57087107,57106400,57126313,57130289 Gene ID= ENSG00000124333.15_PAR_Y TPM= 48.9 Transcript Type= protein_coding